SYMBOL INDEX (33 symbols across 29 files)

FILE: TransProPy/AutoFeatureSelection.py
  function auto_feature_selection (line 11) | def auto_feature_selection(data_file, label_file, label_col, threshold, ...

FILE: TransProPy/AutogluonSelectML.py
  function AutoGluon_SelectML (line 4) | def AutoGluon_SelectML(gene_data_path, class_data_path, label_column, te...

FILE: TransProPy/AutogluonTimeLimit.py
  function Autogluon_TimeLimit (line 3) | def Autogluon_TimeLimit(gene_data_path, class_data_path, label_column, t...

FILE: TransProPy/MACFCmain.py
  function MACFCmain (line 7) | def MACFCmain(max_rank, lable_name, threshold, data_path='../data/gene_t...

FILE: TransProPy/NewMACFCmain.py
  function New_MACFCmain (line 7) | def New_MACFCmain(AUC_threshold, max_rank, lable_name, threshold, data_p...

FILE: TransProPy/UtilsFunction1/Auc.py
  function auc (line 2) | def auc(tlofe, ne, n0, n1):

FILE: TransProPy/UtilsFunction1/AutoNorm.py
  function auto_norm (line 2) | def auto_norm(data):

FILE: TransProPy/UtilsFunction1/FeatureRanking.py
  function feature_ranking (line 3) | def feature_ranking(f, c, max_rank, pos, neg, n0, n1):

FILE: TransProPy/UtilsFunction1/FilterSamples.py
  function filter_samples (line 3) | def filter_samples(threshold, data_path='../data/gene_tpm.csv'):

FILE: TransProPy/UtilsFunction1/GeneNames.py
  function gene_name (line 5) | def gene_name(data_path='../data/gene_tpm.csv'):

FILE: TransProPy/UtilsFunction1/GeneToFeatureMapping.py
  function gene_map_feature (line 1) | def gene_map_feature(gene_names, ranked_features):

FILE: TransProPy/UtilsFunction1/LoadData.py
  function load_data (line 6) | def load_data(lable_name, threshold, data_path='../data/gene_tpm.csv', l...

FILE: TransProPy/UtilsFunction1/NewFeatureRanking.py
  function new_feature_ranking (line 4) | def new_feature_ranking(f, c, AUC_threshold, max_rank, pos, neg, n0, n1):

FILE: TransProPy/UtilsFunction1/PrintResults.py
  function print_results (line 1) | def print_results(high_auc_features, fr, fre1, frequency, len_FName, FNa...

FILE: TransProPy/UtilsFunction2/LogTransform.py
  function log_transform (line 3) | def log_transform(data):

FILE: TransProPy/UtilsFunction2/splitdata.py
  function split_data (line 5) | def split_data(gene_data_path, class_data_path, class_name, test_size=0....

FILE: TransProPy/UtilsFunction3/EnsembleForRFE.py
  class EnsembleForRFE (line 8) | class EnsembleForRFE(BaseEstimator):
    method __init__ (line 20) | def __init__(self, svm_C=1.0, tree_max_depth=None,
    method fit (line 39) | def fit(self, X, y):
    method predict (line 64) | def predict(self, X):
    method set_params (line 85) | def set_params(self, **params):

FILE: TransProPy/UtilsFunction3/ExtractAndSaveResults.py
  function extract_and_save_results (line 10) | def extract_and_save_results(

FILE: TransProPy/UtilsFunction3/ExtractCommonSamples.py
  function extract_common_samples (line 1) | def extract_common_samples(X, Y):

FILE: TransProPy/UtilsFunction3/LoadAndPreprocessData.py
  function load_and_preprocess_data (line 8) | def load_and_preprocess_data(feature_file, label_file, label_column, thr...

FILE: TransProPy/UtilsFunction3/LoadEncodeLabels.py
  function load_encode_labels (line 4) | def load_encode_labels(file_path, column_name):

FILE: TransProPy/UtilsFunction3/LoadFilterTranspose.py
  function load_filter_transpose (line 3) | def load_filter_transpose(threshold, data_path='../data/gene_tpm.csv'):

FILE: TransProPy/UtilsFunction3/LoggingCustomScorer.py
  function logging_custom_scorer (line 5) | def logging_custom_scorer(n_iter=10, n_cv=5):

FILE: TransProPy/UtilsFunction3/PrintBoxedText.py
  function print_boxed_text (line 1) | def print_boxed_text(title):

FILE: TransProPy/UtilsFunction3/SetupFeatureSelection.py
  function setup_feature_selection (line 9) | def setup_feature_selection():

FILE: TransProPy/UtilsFunction3/SetupLoggingAndProgressBar.py
  function setup_logging_and_progress_bar (line 4) | def setup_logging_and_progress_bar(n_iter, n_cv):

FILE: TransProPy/UtilsFunction3/TqdmCustomScorer.py
  function tqdm_custom_scorer (line 4) | def tqdm_custom_scorer(n_iter=10, n_cv=5):

FILE: TransProPy/UtilsFunction3/TrainModel.py
  function train_model (line 14) | def train_model(X, Y, feature_selection, parameters, n_iter, n_cv, n_job...

FILE: TransProPy/UtilsFunction3/UpdateProgressBar.py
  function update_progress_bar (line 1) | def update_progress_bar(pbar, log_file='progress.log'):