SYMBOL INDEX (167 symbols across 36 files)

FILE: docs/_static/require.js
  function commentReplace (line 5) | function commentReplace(e,t){return t||""}
  function isFunction (line 5) | function isFunction(e){return"[object Function]"===ostring.call(e)}
  function isArray (line 5) | function isArray(e){return"[object Array]"===ostring.call(e)}
  function each (line 5) | function each(e,t){if(e)for(var i=0;i<e.length&&(!e[i]||!t(e[i],i,e));i+...
  function eachReverse (line 5) | function eachReverse(e,t){if(e)for(var i=e.length-1;-1<i&&(!e[i]||!t(e[i...
  function hasProp (line 5) | function hasProp(e,t){return hasOwn.call(e,t)}
  function getOwn (line 5) | function getOwn(e,t){return hasProp(e,t)&&e[t]}
  function eachProp (line 5) | function eachProp(e,t){for(var i in e)if(hasProp(e,i)&&-1==disallowedPro...
  function mixin (line 5) | function mixin(i,e,r,n){e&&eachProp(e,function(e,t){!r&&hasProp(i,t)||(!...
  function bind (line 5) | function bind(e,t){return function(){return t.apply(e,arguments)}}
  function scripts (line 5) | function scripts(){return document.getElementsByTagName("script")}
  function defaultOnError (line 5) | function defaultOnError(e){throw e}
  function getGlobal (line 5) | function getGlobal(e){var t;return e&&(t=global,each(e.split("."),functi...
  function makeError (line 5) | function makeError(e,t,i,r){t=new Error(t+"\nhttps://requirejs.org/docs/...
  function newContext (line 5) | function newContext(u){var t,e,f,c,i,b={waitSeconds:7,baseUrl:"./",paths...
  function getInteractiveScript (line 5) | function getInteractiveScript(){return interactiveScript&&"interactive"=...

FILE: examples/Iron_AmMin_paper/iron.py
  function preparing_data (line 11) | def preparing_data(dataliste,**kwargs):
  function intensity (line 121) | def intensity(x,y,idx1=929.,idx2=931.):
  function chimie_control (line 147) | def chimie_control(datalist):
  function molarweights (line 189) | def molarweights():
  function wt_mol (line 241) | def wt_mol(chemtable):

FILE: examples/rameau_example/rameau.py
  function main (line 13) | def main(argv):
  function plot_spectra (line 135) | def plot_spectra(rameau_object,**kwargs):

FILE: legacy_code/Diamond_Pressure.py
  function residual (line 38) | def residual(pars, x, data=None, eps=None):

FILE: legacy_code/HF_Treatment_Auto.py
  function residual (line 182) | def residual(pars, spforcorr, sptarget=None):

FILE: legacy_code/IR_dec_comb.py
  function residual (line 39) | def residual(pars, x, data=None, eps=None):

FILE: legacy_code/LF_Treatment.py
  function removebas_melt (line 32) | def removebas_melt(name):
  function removebas_fluid (line 73) | def removebas_fluid(name):

FILE: legacy_code/LF_dec.py
  function residual_melt (line 40) | def residual_melt(pars, x, data=None, eps=None):
  function residual_fluid (line 77) | def residual_fluid(pars, x, data=None, eps=None):

FILE: legacy_code/Remove_Ctx_MI.py
  function residual (line 133) | def residual(pars, spforcorr, sptarget=None):
  function residual2 (line 185) | def residual2(pars, spforcorr, spctx, sptarget=None):

FILE: src/rampy/baseline.py
  function get_portion_interest (line 21) | def get_portion_interest(x: np.ndarray, y: np.ndarray, roi) -> np.ndarray:
  function extract_signal (line 25) | def extract_signal(x: np.ndarray, y: np.ndarray, roi) -> np.ndarray:
  function validate_input (line 80) | def validate_input(x, y):
  function validate_roi (line 88) | def validate_roi(roi):
  function standardize_data (line 99) | def standardize_data(x: np.ndarray, y: np.ndarray):
  function baseline (line 107) | def baseline(x_input: np.ndarray,
  function fit_baseline (line 223) | def fit_baseline(x: np.ndarray, y: np.ndarray, roi_: np.ndarray, yafit: ...
  function rubberband_baseline (line 310) | def rubberband_baseline(x: np.ndarray, y: np.ndarray) -> np.ndarray:
  function als_baseline (line 355) | def als_baseline(y: np.ndarray, lam: float, p: float, niter: int) -> np....
  function arPLS_baseline (line 367) | def arPLS_baseline(y: np.ndarray, lam: float, ratio: float) -> np.ndarray:
  function drPLS_baseline (line 387) | def drPLS_baseline(y: np.ndarray, niter: int, lam: float, eta: float, ra...

FILE: src/rampy/dac.py
  function ruby_T_corr (line 3) | def ruby_T_corr(T_K: float | np.ndarray) -> float | np.ndarray:
  function borate_T_corr (line 23) | def borate_T_corr(T_K: float | np.ndarray) -> float | np.ndarray:
  function pressure_sensor (line 43) | def pressure_sensor(

FILE: src/rampy/filters.py
  function smooth (line 15) | def smooth(x: np.ndarray, y: np.ndarray, method: str = "whittaker", **kw...
  function whittaker (line 135) | def whittaker(y: np.ndarray, weights: np.ndarray = None, **kwargs) -> np...
  function spectrafilter (line 189) | def spectrafilter(spectre : np.ndarray, filtertype: str, fq: int, numtap...

FILE: src/rampy/functions.py
  function funlog (line 14) | def funlog(x, a, b, c, d):
  function funexp (line 21) | def funexp(x, a, b, c):
  function poly2 (line 28) | def poly2(x, a, b, c):
  function linear (line 32) | def linear(x, a, b):
  function linear0 (line 36) | def linear0(x, a):
  function constant (line 40) | def constant(x, a):
  function multigaussian (line 56) | def multigaussian(x,params):
  function gauss_lsq (line 68) | def gauss_lsq(params,x):
  function gauss_lsq_lfix (line 99) | def gauss_lsq_lfix(params,x):
  function diffshort (line 137) | def diffshort(x: np.ndarray, t: float, C0: float, C1: float, D: float) -...
  function difffull (line 163) | def difffull(x1: float, x2: float, t: float, C0: float, C1: float, D: fl...

FILE: src/rampy/maps.py
  class maps (line 17) | class maps():
    method __init__ (line 36) | def __init__(self, file,
    method background (line 70) | def background(self, bir, method = "poly", **kwargs):
    method normalise (line 115) | def normalise(self, y, method="intensity"):
    method smooth (line 130) | def smooth(self, y, method="whittaker",**kwargs):
    method centroid (line 154) | def centroid(self, y, region_to_investigate):
    method intensity (line 169) | def intensity(self, y, region_to_investigate):
    method area (line 186) | def area(self, y, region_to_investigate):
    method intensity_ratio (line 203) | def intensity_ratio(self, y, region_to_investigate):
    method area_ratio (line 226) | def area_ratio(self, y, region_to_investigate):
  function read_renishaw (line 248) | def read_renishaw(file):
  function read_horiba (line 281) | def read_horiba(file, map_type="2D"):
  function peak (line 319) | def peak(X, Y, lambdas, intensities, function, Xrange, amp, Xmean, sigma...

FILE: src/rampy/mixing.py
  function mixing_sp (line 12) | def mixing_sp(y_fit: np.ndarray, ref1: np.ndarray, ref2: np.ndarray) -> ...

FILE: src/rampy/ml_classification.py
  class mlclassificator (line 13) | class mlclassificator:
    method __init__ (line 37) | def __init__(self,x,y,**kwargs):
    method scale_data (line 112) | def scale_data(self):
    method fit (line 121) | def fit(self, params_: dict = None):
    method refit (line 163) | def refit(self):
    method predict (line 176) | def predict(self,X):

FILE: src/rampy/ml_exploration.py
  class mlexplorer (line 12) | class mlexplorer:
    method __init__ (line 62) | def __init__(self,x,**kwargs):
    method fit (line 105) | def fit(self):
    method refit (line 121) | def refit(self):
    method predict (line 132) | def predict(self,X):

FILE: src/rampy/ml_regressor.py
  function chemical_splitting (line 19) | def chemical_splitting(Pandas_DataFrame, target, split_fraction=0.30, ra...
  class mlregressor (line 78) | class mlregressor:
    method __init__ (line 151) | def __init__(self,x,y,**kwargs):
    method fit (line 223) | def fit(self):
    method refit (line 283) | def refit(self):
    method predict (line 298) | def predict(self,X):

FILE: src/rampy/notused/IRTABS.py
  function FTIRout (line 14) | def FTIRout(nameR,nameB,nameout,thick,**options): # FUNCTION TO CALCULAT...
  function FTIRcomp (line 65) | def FTIRcomp(names, listelg, plotdisplay, nameout): # FUNCTION TO PLOT T...

FILE: src/rampy/peak_area.py
  function peakarea (line 16) | def peakarea(shape: str, amp: float, HWHM: float, pos: float = None,
  function gaussianarea (line 137) | def gaussianarea(amp,HWHM,**options):
  function area_peak (line 161) | def area_peak(

FILE: src/rampy/peak_shapes.py
  function gaussian (line 14) | def gaussian(x: np.ndarray, amp, freq, HWHM) -> np.ndarray:
  function lorentzian (line 51) | def lorentzian(x: np.ndarray, amp, freq, HWHM) -> np.ndarray:
  function pseudovoigt (line 88) | def pseudovoigt(x: np.ndarray, amp, freq, HWHM, L_ratio) -> np.ndarray:
  function pearson7 (line 132) | def pearson7(x, a0, a1, a2, a3):

FILE: src/rampy/plotting.py
  function plot_spectrum (line 12) | def plot_spectrum(

FILE: src/rampy/rameau.py
  class rameau (line 16) | class rameau:
    method __init__ (line 84) | def __init__(self, data_liste, path_spectra='./raw/'):
    method data_reduction (line 90) | def data_reduction(self,method="LL2012",delim='\t',laser=514.532,splin...
    method calibrate (line 127) | def calibrate(self,data_calib=None,method="LL2012", delim='\t',path_ca...
    method predict (line 196) | def predict(self,method="LL2012"):
    method external_calibration (line 236) | def external_calibration(self, path_ref='./raw/Standards/', roi = np.a...
  function fit_spectra (line 321) | def fit_spectra(data_liste,method="LL2012",delim='\t',path_in='./raw/',l...
  function DG2017_predict (line 438) | def DG2017_predict(dictio,a=0.096,b=0.663):
  function DG2017_calibrate (line 456) | def DG2017_calibrate(dictio):
  function LL2012_predict (line 472) | def LL2012_predict(dictio,A=0.007609):
  function LL2012_calibrate (line 487) | def LL2012_calibrate(dictio):

FILE: src/rampy/spectranization.py
  function spectrarray (line 15) | def spectrarray(name: np.ndarray, sh: int, sf: int, x: np.ndarray) -> np...
  function spectrataux (line 64) | def spectrataux(spectres: np.ndarray) -> np.ndarray:
  function spectraoffset (line 110) | def spectraoffset(spectre, oft):
  function shiftsp (line 144) | def shiftsp(sp: np.ndarray, shift: float) -> np.ndarray:
  function flipsp (line 166) | def flipsp(sp: np.ndarray) -> np.ndarray:
  function resample (line 188) | def resample(x: np.ndarray, y: np.ndarray, x_new: np.ndarray, fill_value...
  function normalise (line 217) | def normalise(y: np.ndarray, x : np.ndarray = None, method: str = "inten...
  function centroid (line 262) | def centroid(x: np.ndarray, y: np.ndarray, smoothing: bool = False, **kw...
  function despiking (line 294) | def despiking(x: np.ndarray, y: np.ndarray, neigh:int = 4, threshold:int...
  function invcm_to_nm (line 347) | def invcm_to_nm(x_inv_cm: np.ndarray, laser_nm: float = 532.0) -> np.nda...
  function nm_to_invcm (line 367) | def nm_to_invcm(x: np.ndarray, laser_nm: float = 532.0) -> np.ndarray:
  function convert_x_units (line 387) | def convert_x_units(x: np.ndarray, laser_nm: float = 532.0, way: str = "...

FILE: src/rampy/tlcorrection.py
  function tlcorrection (line 13) | def tlcorrection(x: np.ndarray, y: np.ndarray, temperature: float, wavel...

FILE: tests/test_baseline.py
  class TestBaseline (line 11) | class TestBaseline(unittest.TestCase):
    method test_baseline (line 13) | def test_baseline(self):

FILE: tests/test_dac.py
  class TestPressureFunctions (line 5) | class TestPressureFunctions(unittest.TestCase):
    method test_ruby_T_corr (line 7) | def test_ruby_T_corr(self):
    method test_borate_T_corr (line 16) | def test_borate_T_corr(self):
    method test_pressure_sensor_ruby (line 25) | def test_pressure_sensor_ruby(self):
    method test_pressure_sensor_borate_datchi (line 39) | def test_pressure_sensor_borate_datchi(self):
    method test_pressure_sensor_invalid_scale (line 55) | def test_pressure_sensor_invalid_scale(self):

FILE: tests/test_mixing.py
  class TestSmooth (line 8) | class TestSmooth(unittest.TestCase):
    method test_mixing (line 10) | def test_mixing(self):

FILE: tests/test_mlclassificator.py
  class TestMLC (line 13) | class TestMLC(unittest.TestCase):
    method test_mlclassificator (line 15) | def test_mlclassificator(self):

FILE: tests/test_mlexplorer.py
  class TestML2 (line 11) | class TestML2(unittest.TestCase):
    method test_mlexplorer (line 13) | def test_mlexplorer(self):

FILE: tests/test_mlregressor.py
  class TestML (line 11) | class TestML(unittest.TestCase):
    method test_mlregressor (line 13) | def test_mlregressor(self):

FILE: tests/test_peakarea.py
  class TestPeakArea (line 6) | class TestPeakArea(unittest.TestCase):
    method test_gaussian_peak (line 7) | def test_gaussian_peak(self):
    method test_gaussian_with_uncertainties (line 17) | def test_gaussian_with_uncertainties(self):
    method test_lorentzian_peak (line 32) | def test_lorentzian_peak(self):
    method test_pseudovoigt_peak (line 44) | def test_pseudovoigt_peak(self):
    method test_pearson7_peak (line 57) | def test_pearson7_peak(self):
    method test_invalid_shape (line 70) | def test_invalid_shape(self):
    method test_missing_parameters (line 75) | def test_missing_parameters(self):
    method test_invalid_L_ratio (line 82) | def test_invalid_L_ratio(self):
    method test_array_inputs (line 89) | def test_array_inputs(self):
    method test_area_peak (line 102) | def test_area_peak(self):

FILE: tests/test_plotting.py
  class TestPlotSpectra (line 6) | class TestPlotSpectra(unittest.TestCase):
    method setUp (line 7) | def setUp(self):
    method test_plot_spectra_no_baselines_or_smoothed_signals (line 18) | def test_plot_spectra_no_baselines_or_smoothed_signals(self):
    method test_plot_spectra_with_baselines_and_smoothed_signals (line 32) | def test_plot_spectra_with_baselines_and_smoothed_signals(self):
    method test_plot_spectra_with_missing_labels (line 53) | def test_plot_spectra_with_missing_labels(self):

FILE: tests/test_smooth.py
  class TestSmooth (line 10) | class TestSmooth(unittest.TestCase):
    method test_smooth (line 12) | def test_smooth(self):

FILE: tests/test_spectranization.py
  class TestSpectranization (line 12) | class TestSpectranization(unittest.TestCase):
    method test_flipsp (line 14) | def test_flipsp(self):
    method test_resample (line 25) | def test_resample(self):
    method test_centroid (line 38) | def test_centroid(self):
    method test_normalise (line 54) | def test_normalise(self):
    method test_despiking (line 68) | def test_despiking(self):

FILE: tests/test_tlcorrection.py
  class Testtlcorrection (line 10) | class Testtlcorrection(unittest.TestCase):
    method test_tlcorrection (line 12) | def test_tlcorrection(self):