gitextract_x54ha2uu/

├── Data/
│   ├── Example_network_edges.xlsx
│   ├── Matand_2020_Stem_Data.xlsx
│   ├── Network_Example/
│   │   ├── Fig4c_1.csv
│   │   ├── Fig4c_2.csv
│   │   └── Readme
│   ├── deidentified_cell_feature_data.csv
│   └── heatmap_example.csv
├── Heatmap_tutorial.md
├── LICENSE.md
├── README.md
├── Results/
│   └── a
└── Scripts/
    ├── Abstract_aRt.R
    ├── Animated_networks.Rmd
    ├── Bar_meadow_for_factorial.Rmd
    ├── Bar_plots_for_means_separation.Rmd
    ├── BoxPlot_for_Binomial.Rmd
    ├── Broken_axis.R
    ├── Check_outlier_for_heatmaps.Rmd
    ├── Check_range_at_factor_levels.Rmd
    ├── Divergent_gradient_for_unidirectional_data.Rmd
    ├── Histogram_for_small_n.Rmd
    ├── Mixing_stacked_bar_and_mean_separation.Rmd
    ├── NetworkLayouts.Rmd
    ├── NoConcentricDonuts.Rmd
    ├── NoPieCharts.Rmd
    ├── Position_vs_length_based_visualizations.Rmd
    ├── Red_green.Rmd
    ├── Reorder_rows_col_heatmap.Rmd
    ├── Violin_plot_for_small_n.Rmd
    └── stacked_bars_optimization.Rmd