Repository: hbilen/WSDDN
Branch: master
Commit: bfdaa3f9ffed
Files: 21
Total size: 67.3 KB

Directory structure:
gitextract_kzv54tvv/

├── .gitignore
├── README.md
├── core/
│   ├── wsddn_demo.m
│   ├── wsddn_get_batch.m
│   ├── wsddn_init.m
│   ├── wsddn_test.m
│   └── wsddn_train.m
├── matlab/
│   └── +dagnn/
│       ├── BiasSamples.m
│       ├── LayerAP.m
│       ├── LossTopBoxSmoothProb.m
│       ├── SoftMax2.m
│       ├── SumOverDim.m
│       └── Times.m
├── pascal/
│   ├── nms.m
│   ├── setup_voc07_eb.m
│   ├── setup_voc07_ssw.m
│   ├── wsddnVOCap.m
│   ├── wsddnVOCevaldet.m
│   ├── wsddnVOChash_init.m
│   └── wsddnVOChash_lookup.m
└── setup_WSDDN.m

================================================
FILE CONTENTS
================================================

================================================
FILE: .gitignore
================================================
*~


================================================
FILE: README.md
================================================
# Weakly Supervised Deep Detection Networks (WSDDN)


## Installation
1. Download and install [MatConvNet](http://www.vlfeat.org/matconvnet/install/)
2. Install this module with the package manager of MatConvNet [`vl_contrib`](http://www.vlfeat.org/matconvnet/mfiles/vl_contrib/#notes):

```
    vl_contrib('install', 'WSDDN') ;
    vl_contrib('setup', 'WSDDN') ;
```

3. If you want to train a WSDDN model, `wsddn_train` will automatically download the items below:

    a.  [PASCAL VOC 2007 devkit and dataset](http://host.robots.ox.ac.uk/pascal/VOC/) under `data` folder

    b.  Pre-computed edge-boxes for [trainval](http://groups.inf.ed.ac.uk/hbilen-data/data/WSDDN/EdgeBoxesVOC2007trainval.mat) and [test](http://groups.inf.ed.ac.uk/hbilen-data/WSDDN/EdgeBoxesVOC2007test.mat) splits:

    c. Pre-trained network from [MatConvNet website](http://www.vlfeat.org/matconvnet/models)

4. You can also download the pre-trained WSDDN model ([VGGF-EB-BoxSc-SpReg](http://groups.inf.ed.ac.uk/hbilen-data/data/WSDDN/wsddn.mat)). Note that it gives slightly different performance reported than in the paper (34.4% mAP instead of 34.5% mAP)


## Demo

After completing the installation and downloading the required files, you are ready for the demo

```matlab
            cd scripts;
            opts.modelPath = '....' ;
            opts.imdbPath = '....' ;
            opts.gpu = .... ;
            wsddn_demo(opts) ;
                        
```

## Test

```matlab
            addpath scripts;
            opts.modelPath = '....' ;
            opts.imdbPath = '....' ;
            opts.gpu = .... ;
            opts.vis = true ; % visualize
            wsddn_test(opts) ;
                        
```

## Train

Download an ImageNet pre-trained model from [http://www.vlfeat.org/matconvnet/pretrained/](http://www.vlfeat.org/matconvnet/pretrained/)

```matlab
            addpath scripts;
            opts.modelPath = '....' ;
            opts.imdbPath = '....' ;
            opts.train.gpus = .... ;
            [net,info] = wsddn_train(opts) ;
                        
```

## Citing WSDDN
If you find the code useful, please cite:

```latex
    @inproceedings{Bilen16,
      author     = "Bilen, H. and Vedaldi, A.",
      title      = "Weakly Supervised Deep Detection Networks",
      booktitle  = "Proceedings of the IEEE Conference on Computer Vision and Pattern Recognition",
      year       = "2016"
    }
```

## Acknowledgement
Many thanks to Sam Albanie for his help with contrib package manager and other nameless heros who diligently found my bugs.

### License
The analysis work performed with the program(s) must be non-proprietary work. Licensee and its contract users must be or be affiliated with an academic facility. Licensee may additionally permit individuals who are students at such academic facility to access and use the program(s). Such students will be considered contract users of licensee. The program(s) may not be used for commercial competitive analysis (such as benchmarking) or for any commercial activity, including consulting.


================================================
FILE: core/wsddn_demo.m
================================================
function wsddn_demo(varargin)
% @author: Hakan Bilen
% wsddn_demo : this script shows a detection demo

opts.dataDir = fullfile(vl_rootnn, 'data') ;
opts.expDir = fullfile(vl_rootnn, 'exp') ;
opts.imdbPath = fullfile(vl_rootnn, 'data', 'imdbs', 'imdb-eb.mat');
opts.modelPath = fullfile(vl_rootnn, 'exp', 'net.mat') ;
opts.proposalType = 'eb' ;
opts.proposalDir = fullfile(vl_rootnn, 'data','EdgeBoxes') ;

% if you have limited gpu memory (<6gb), you can change the next 2 params
opts.maxNumProposals = inf; % limit number
% opts.imageScales = [480,576,688,864,1200]; % scales
opts.imageScales = [480,576,688,864,1200]; % scales

opts.gpu = [] ;
opts.train.prefetch = true ;

opts.numFetchThreads = 1 ;
opts = vl_argparse(opts, varargin) ;

display(opts);
if ~exist(fullfile(opts.dataDir,'VOCdevkit','VOCcode','VOCinit.m'),'file')
  error('VOCdevkit is not installed');
end
addpath(fullfile(opts.dataDir,'VOCdevkit','VOCcode'));
opts.train.expDir = opts.expDir ;
% -------------------------------------------------------------------------
%                                                    Network initialization
% -------------------------------------------------------------------------

if ~exist(opts.modelPath, 'file')
  url = 'http://groups.inf.ed.ac.uk/hbilen-data/data/WSDDN/wsddn.mat' ;
  fprintf('Downloading %s to %s\n', url, opts.modelPath) ;
  urlwrite(url, opts.modelPath) ;
end

net = load(opts.modelPath);
net = dagnn.DagNN.loadobj(net) ;

net.mode = 'test' ;
if ~isempty(opts.gpu)
  gpuDevice(opts.gpu) ;
  net.move('gpu') ;
end

if isfield(net,'normalization')
  bopts = net.normalization;
else
  bopts = net.meta.normalization;
end

bopts.rgbVariance = [] ;
bopts.interpolation = net.meta.normalization.interpolation;
bopts.jitterBrightness = 0 ;
bopts.imageScales = opts.imageScales;
bopts.numThreads = opts.numFetchThreads;
bs = find(arrayfun(@(a) isa(a.block, 'dagnn.BiasSamples'), net.layers)==1);
bopts.addBiasSamples = ~isempty(bs) ;
bopts.vgg16 = any(arrayfun(@(a) strcmp(a.name, 'relu5_1'), net.layers)==1) ;

% -------------------------------------------------------------------------
%                                                   Database initialization
% -------------------------------------------------------------------------
fprintf('loading imdb...');
if exist(opts.imdbPath,'file')==2
  imdb = load(opts.imdbPath) ;
else
  imdb = setup_voc07_eb('dataDir',opts.dataDir, ...
    'proposalDir',opts.proposalDir,'loadTest',1);
    
  save(opts.imdbPath,'-struct', 'imdb', '-v7.3');
end

fprintf('done\n');
minSize = 20;
imdb = fixBBoxes(imdb, minSize, opts.maxNumProposals);

% --------------------------------------------------------------------
%                                                               Detect
% --------------------------------------------------------------------
% query images
testIdx = [12,15];

VOCinit;
cats = VOCopts.classes;
ovTh = 0.4; % nms threshold
scTh = 0.1; % det confidence threshold

bopts.useGpu = numel(opts.gpu) >  0 ;

detLayer = find(arrayfun(@(a) strcmp(a.name, 'xTimes'), net.vars)==1);

net.vars(detLayer(1)).precious = 1;
% run detection
rcolors = randi(255,3,numel(cats));
for t=1:numel(testIdx)
  batch = testIdx(t);  
  
  scoret = [];
  for s=1:numel(opts.imageScales)
    for f=1:2 % add flips
      inputs = getBatch(bopts, imdb, batch, opts.imageScales(s), f-1 );
      net.eval(inputs) ;
  
      if isempty(scoret)
        scoret = squeeze(gather(net.vars(detLayer).value));
      else
        scoret = scoret + squeeze(gather(net.vars(detLayer).value));
      end
    end
  end
  
  % divide by number of scales and flips
  scoret = scoret / (2 * numel(opts.imageScales));
  im = imread(fullfile(imdb.imageDir,imdb.images.name{testIdx(t)}));
  
  for cls = 1:numel(cats)
    scores = scoret;
    boxes  = double(imdb.images.boxes{testIdx(t)});
    boxesSc = [boxes,scores(cls,:)'];
    boxesSc = boxesSc(boxesSc(:,5)>scTh,:);
    if isempty(boxesSc), continue; end;
    
    pick = nms(boxesSc, ovTh);
    boxesSc = boxesSc(pick,:);
    im = bbox_draw(im,boxesSc(1,1:4),rcolors(:,cls),2);
    fprintf('%s %.2f\n',cats{cls},boxesSc(1,5));
  end
  imshow(im);
  pause() ;
  if exist('zs_dispFig', 'file'), zs_dispFig ; end
end



% --------------------------------------------------------------------
function inputs = getBatch(opts, imdb, batch, scale, flip)
% --------------------------------------------------------------------

opts.scale = scale;
opts.flip = flip;
is_vgg16 = opts.vgg16 ;
opts = rmfield(opts,'vgg16') ;

images = strcat([imdb.imageDir filesep], imdb.images.name(batch)) ;
opts.prefetch = (nargout == 0);

[im,rois] = wsddn_get_batch(images, imdb, batch, opts);


rois = single(rois');
if opts.useGpu > 0
  im = gpuArray(im) ;
  rois = gpuArray(rois) ;
end
rois = rois([1 3 2 5 4],:) ;


ss = [16 16] ;
if is_vgg16
  o0 = 8.5 ;
  o1 = 9.5 ;
else
  o0 = 18 ;
  o1 = 9.5 ;
end
rois = [ rois(1,:);
        floor((rois(2,:) - o0 + o1) / ss(1) + 0.5) + 1;
        floor((rois(3,:) - o0 + o1) / ss(2) + 0.5) + 1;
        ceil((rois(4,:) - o0 - o1) / ss(1) - 0.5) + 1;
        ceil((rois(5,:) - o0 - o1) / ss(2) - 0.5) + 1];

      
inputs = {'input', im, 'rois', rois} ;
  
  
if opts.addBiasSamples && isfield(imdb.images,'boxScores')
  boxScore = reshape(imdb.images.boxScores{batch},[1 1 1 numel(imdb.images.boxScores{batch})]);
  inputs{end+1} = 'boxScore';
  inputs{end+1} = boxScore ; 
end


% -------------------------------------------------------------------------
function imdb = fixBBoxes(imdb, minSize, maxNum)
% -------------------------------------------------------------------------

for i=1:numel(imdb.images.name)
  bbox = imdb.images.boxes{i};
  % remove small bbox
  isGood = (bbox(:,3)>=bbox(:,1)+minSize) & (bbox(:,4)>=bbox(:,2)+minSize);
  bbox = bbox(isGood,:);
  % remove duplicate ones
  [dummy, uniqueIdx] = unique(bbox, 'rows', 'first');
  uniqueIdx = sort(uniqueIdx);
  bbox = bbox(uniqueIdx,:);
  % limit number for training
  if imdb.images.set(i)~=3
    nB = min(size(bbox,1),maxNum);
  else
    nB = size(bbox,1);
  end
  
  if isfield(imdb.images,'boxScores')
    imdb.images.boxScores{i} = imdb.images.boxScores{i}(uniqueIdx);
    imdb.images.boxScores{i} = imdb.images.boxScores{i}(1:nB);
  end
  imdb.images.boxes{i} = bbox(1:nB,:);
  %   [h,w,~] = size(imdb.images.data{i});
  %   imdb.images.boxes{i} = [1 1 h w];
  
end

% -------------------------------------------------------------------------
function im = bbox_draw(im,roi,color,t)
% DRAWRECT
% IM : input image
% ROI : rectangle
% COLOR :
% T : thickness

[h,w,d] = size(im);
assert(d == numel(color));
if any(roi(:,1)>h) || any(roi(:,3)>h) || any(roi(:,2)>w) || any(roi(:,4)>w)
  error('Wrong bounding box coord!\n');
end
for c=1:d
  im(max(roi(1)-t,1):min(roi(1)+t,h),max(roi(2)-t,1):min(roi(4)+t,w),c) = color(c);
  im(max(roi(3)-t,1):min(roi(3)+t,h),max(roi(2)-t,1):min(roi(4)+t,w),c) = color(c);
  im(max(roi(1)-t,1):min(roi(3)+t,h),max(roi(2)-t,1):min(roi(2)+t,w),c) = color(c);
  im(max(roi(1)-t,1):min(roi(3)+t,h),max(roi(4)-t,1):min(roi(4)+t,w),c) = color(c);
end


================================================
FILE: core/wsddn_get_batch.m
================================================
function [imo,rois] = wsddn_get_batch(images, imdb, batch, opts)
% cnn_wsddn_get_batch  Load, preprocess, and pack images for CNN evaluation

if isempty(images)
  imo = [] ;
  rois = [] ;
  return ;
end

% fetch is true if images is a list of filenames (instead of
% a cell array of images)
fetch = ischar(images{1}) ;

% prefetch is used to load images in a separate thread
prefetch = fetch & opts.prefetch ;

% pick size
imSize = imdb.images.size(batch(1),:);
factor = min(opts.scale(1)/imSize(1),opts.scale(1)/imSize(2));
height = floor(factor*imSize(1));

if prefetch
  vl_imreadjpeg(images, 'numThreads',opts.numThreads,'Resize',height,'prefetch') ;
  imo = [] ;
  rois = [] ;
  return ;
end

if fetch
  ims = vl_imreadjpeg(images,'numThreads',opts.numThreads,'Resize',height) ;
else
  ims = images ;
end

for i=1:numel(images)
  % acquire image
  if isempty(ims{i})
    imt = imread(images{i}) ;
    if size(imt,3) == 1
      imt = cat(3, imt, imt, imt) ;
    end
    
    ims{i} = imresize(imt,factor,'Method',opts.interpolation);
    ims{i} = single(ims{i}) ; % faster than im2single (and multiplies by 255)
  end
end



bboxes = cell(1,numel(batch));
nBoxes = 0;
for b=1:numel(batch)
  bboxes{b} = double(imdb.images.boxes{batch(b)});
  nBoxes = nBoxes + size(bboxes{b},1);
end
 

rois = zeros(nBoxes,5);
countr = 0;

maxW = 0;
maxH = 0;



for b=1:numel(batch)
  
  hw = imdb.images.size(batch(b),:);
  h = hw(1);
  w = hw(2);
  
  imsz = size(ims{b});
  
  if opts.flip(b)
    im = ims{b};
    ims{b} = im(:,end:-1:1,:);
    
    bbox = bboxes{b};
    bbox(:,[2,4]) = w + 1 - bbox(:,[4,2]);
    bboxes{b} = bbox;
  end
  

  maxH = max(imsz(1),maxH);
  maxW = max(imsz(2),maxW);
 
  % adapt bounding boxes into new coord
  bbox = bboxes{b};
  if any(bbox(:)<=0)
    error('bbox error');
  end
  nB = size(bbox,1);
  tbbox = scale_box(bbox,[h,w],imsz);
  if any(tbbox(:)<=0)
    error('tbbox error');
  end

  rois(countr+1:countr+nB,:) = [b*ones(nB,1),tbbox];
  countr = countr + nB;
end

% rois = single(rois);
depth = size(ims{1},3);
imo = zeros(maxH,maxW,depth,numel(batch),'single');

if isempty(opts.averageImage)
  avgIm = [];
elseif numel(opts.averageImage)==depth
  avgIm = opts.averageImage;
end


for b=1:numel(batch)
  sz = size(ims{b});

  imo(1:sz(1),1:sz(2),:,b) = single(ims{b});
  
  if ~isempty(avgIm)
    imo(1:sz(1),1:sz(2),:,b) = single(bsxfun(@minus,imo(1:sz(1),1:sz(2),:,b),opts.averageImage));
  end
  if ~isempty(opts.rgbVariance)
    imo(1:sz(1),1:sz(2),:,b) = bsxfun(@plus, imo(1:sz(1),1:sz(2),:,b), ...
        reshape(opts.rgbVariance * randn(3,1), 1,1,3)) ;
  end
end


function boxOut = scale_box(boxIn,szIn,szOut)
  
  h = szIn(1);
  w = szIn(2);

  bxr = 0.5 * (boxIn(:,2)+boxIn(:,4)) / w;
  byr = 0.5 * (boxIn(:,1)+boxIn(:,3)) / h;
 
  bwr = (boxIn(:,4)-boxIn(:,2)+1) / w;
  bhr = (boxIn(:,3)-boxIn(:,1)+1) / h;
  
  % boxIn center in new coord
  byhat = (szOut(1) * byr);
  bxhat = (szOut(2) * bxr);
  
  % relative width, height
  bhhat = szOut(1) * bhr;
  bwhat = szOut(2) * bwr;
  
  % transformed boxIn
  boxOut = [max(1,round(byhat - 0.5 * bhhat)),...
    max(1,round(bxhat - 0.5 * bwhat)), ...
    min(szOut(1),round(byhat + 0.5 * bhhat)),...
    min(szOut(2),round(bxhat + 0.5 * bwhat))];



================================================
FILE: core/wsddn_init.m
================================================
% --------------------------------------------------------------------
function net = wsddn_init(net,varargin)
% --------------------------------------------------------------------
% @author: Hakan Bilen
% wsddn_init : this script initalise WSDDN model

opts.addBiasSamples = 1 ;
opts.softmaxTempCls = 1 ;
opts.softmaxTempDet = 2 ;
opts.addLossSmooth  = 1 ;
opts.averageImage = [] ;
opts.rgbVariance = [] ;
opts.numClasses = 1 ;
opts.classNames = {''} ;

opts = vl_argparse(opts, varargin) ;

% add drop-out layers
relu6p = find(cellfun(@(a) strcmp(a.name, 'relu6'), net.layers)==1);
relu7p = find(cellfun(@(a) strcmp(a.name, 'relu7'), net.layers)==1);

drop6 = struct('type', 'dropout', 'rate', 0.5, 'name','drop6');
drop7 = struct('type', 'dropout', 'rate', 0.5, 'name','drop7');
net.layers = [net.layers(1:relu6p) drop6 net.layers(relu6p+1:relu7p) drop7 net.layers(relu7p+1:end)];


% change loss fc layer
fc8p = (cellfun(@(a) strcmp(a.name, 'fc8'), net.layers)==1);
net.layers{fc8p}.weights{1} = 0.01 * ...
  randn(1,1,size(net.layers{fc8p}.weights{1},3),opts.numClasses,'single');

net.layers{fc8p}.weights{2} = zeros(1, opts.numClasses, 'single');
net.layers{fc8p}.name = 'fc8C';

net.layers(end) = [] ;
% add loss (this will be changed to binary log at the end)
% net.layers{end} = struct('name','loss', 'type','softmaxloss') ;

% add detection layer
clsLayerPos  = (cellfun(@(a) strcmp(a.name, 'fc8C'), net.layers)==1);
detLayer = net.layers{clsLayerPos};
detLayer.weights{1} = 0.01 * randn(1,1,size(detLayer.weights{1},3),opts.numClasses,'single');
% detLayer.weights{1} = zeros(1,1,size(detLayer.weights{1},3),opts.numClasses,'single');
detLayer.weights{2} = zeros(1, opts.numClasses, 'single');

detLayer.name = 'fc8R';

% remove pool5
pPool5 = find(cellfun(@(a) strcmp(a.name, 'pool5'), net.layers)==1);
net.layers = [net.layers([1:pPool5-1,pPool5+1:end]) detLayer];

% convert to dagnn
net = dagnn.DagNN.fromSimpleNN(net, 'canonicalNames', true) ;

% fix fc8R
pFc8R = (arrayfun(@(a) strcmp(a.name, 'fc8R'), net.layers)==1);
pFc8C = (arrayfun(@(a) strcmp(a.name, 'fc8C'), net.layers)==1);

net.layers(pFc8R).inputs = net.layers(pFc8C).inputs;
net.layers(pFc8R).inputIndexes = net.layers(pFc8C).inputIndexes;

% add spp

pRelu5 = (arrayfun(@(a) strcmp(a.name, 'relu5'), net.layers)==1);
vggdeep = 0;
if all(pRelu5==0)
  pRelu5 = (arrayfun(@(a) strcmp(a.name, 'relu5_3'), net.layers)==1);
  assert(any(pRelu5==1));
  vggdeep = 1;
end
pFc6 = (arrayfun(@(a) strcmp(a.name, 'fc6'), net.layers)==1);

% add spp (offset1 = rf offset, offset2 = shrinking factor)
% offset1=18  offset2=9.5 levels=6 for vgg-f and vgg-m-1024
% offset1=8.5 offset2=9.5 levels=7 for vgg-very-deep-16
if vggdeep
  net.addLayer('SPP', dagnn.ROIPooling('subdivisions',[7 7],...
    'transform',1), ...
    {net.layers(pRelu5).outputs{1},'rois'}, ...
    'xSPP');
else
  net.addLayer('SPP', dagnn.ROIPooling('subdivisions',[6 6],...
    'transform',1), ...
    {net.layers(pRelu5).outputs{1},'rois'}, ...
    'xSPP');
end


if opts.addBiasSamples
  % add boost
  net.addLayer('boostBox', ...
    dagnn.BiasSamples('scale',10), ...
    {'xSPP','boxScore'},'xBoostBox');
  net.layers(pFc6).inputs{1} = 'xBoostBox';
else
  net.layers(pFc6).inputs{1} = 'xSPP';
end



% add softmax layer for det
pFc8R = (arrayfun(@(a) strcmp(a.name, 'fc8R'), net.layers)==1);
net.addLayer('softmaxDet', ...
  dagnn.SoftMax2('dim',4, 'temp',opts.softmaxTempDet), ...
  net.layers(pFc8R).outputs{1},'xSoftmaxDet');

% add softmax layers for cls
pFc8C = (arrayfun(@(a) strcmp(a.name, 'fc8C'), net.layers)==1);
net.layers(pFc8C).outputs{1} = 'xfc8C';

net.addLayer('softmaxCls', ...
  dagnn.SoftMax2('dim',3, 'temp',opts.softmaxTempCls), ...
  net.layers(pFc8C).outputs{1},'xSoftmaxCls');

% add times layer
net.addLayer('timesCR', ...
  dagnn.Times(), ...
  {'xSoftmaxCls','xSoftmaxDet'},'xTimes');

% add sum layer
net.addLayer('sum', ...
  dagnn.SumOverDim('dim',4), ...
  'xTimes','prediction');



% add classification AP
net.addLayer('mAP', dagnn.LayerAP('cls_index',1:opts.numClasses), ...
  {'prediction','label', 'ids'}, 'mAP') ;

net.addLayer('loss', dagnn.Loss('loss','binarylog'), ...
  {'prediction','label'}, 'objective') ;


% no decay for bias
for i=2:2:numel(net.params)
  net.params(i).weightDecay = 0;
end

if opts.addLossSmooth
  net.addLayer('LossTopBoxSmooth',dagnn.LossTopBoxSmoothProb('minOverlap',0.6),...
    {net.layers(pFc8R).inputs{1},'boxes','xTimes','label'},...
    'lossTopB');
end
meta = net.meta ; 
net.meta = [] ;
net.meta.normalization.interpolation = meta.normalization.interpolation ;
net.meta.normalization.averageImage  = opts.averageImage ;
net.meta.normalization.rgbVariance   = opts.rgbVariance ;
net.meta.classes.name = {'aeroplane', 'bicycle', 'bird', ...
    'boat', 'bottle', 'bus', 'car', 'cat', 'chair', 'cow', 'diningtable', ...
    'dog', 'horse', 'motorbike', 'person', 'pottedplant', 'sheep', ...
    'sofa', 'train', 'tvmonitor', 'background' };

================================================
FILE: core/wsddn_test.m
================================================
function aps = wsddn_test(varargin)
% @author: Hakan Bilen
% wsddn_test : this script evaluates detection performance in PASCAL VOC
% dataset for given a WSDDN model

opts.dataDir = fullfile(vl_rootnn, 'data') ;
opts.expDir = fullfile(vl_rootnn, 'exp') ;
opts.imdbPath = fullfile(vl_rootnn, 'data', 'imdbs', 'imdb-eb.mat');
opts.modelPath = fullfile(vl_rootnn, 'exp', 'net.mat') ;
opts.proposalType = 'eb' ;
opts.proposalDir = fullfile(vl_rootnn, 'data','EdgeBoxes') ;

% if you have limited gpu memory (<6gb), you can change the next 2 params
opts.maxNumProposals = inf; % limit number
opts.imageScales = [480,576,688,864,1200]; % scales

opts.gpu = [] ;
opts.train.prefetch = true ;
opts.vis = 0 ;
opts.numFetchThreads = 1 ;
opts = vl_argparse(opts, varargin) ;

display(opts);
if ~exist(fullfile(opts.dataDir,'VOCdevkit','VOCcode','VOCinit.m'),'file')
  error('VOCdevkit is not installed');
end
addpath(fullfile(opts.dataDir,'VOCdevkit','VOCcode'));
opts.train.expDir = opts.expDir ;
% -------------------------------------------------------------------------
%                                                    Network initialization
% -------------------------------------------------------------------------
net = load(opts.modelPath);
% figure(2) ;
if isfield(net,'net')
  net = net.net;
end
net = dagnn.DagNN.loadobj(net) ;

net.mode = 'test' ;
if ~isempty(opts.gpu)
  gpuDevice(opts.gpu) ;
  net.move('gpu') ;
end

if isfield(net,'normalization')
  bopts = net.normalization;
else
  bopts = net.meta.normalization;
end

bopts.rgbVariance = [] ;
bopts.interpolation = net.meta.normalization.interpolation;
bopts.jitterBrightness = 0 ;
bopts.imageScales = opts.imageScales;
bopts.numThreads = opts.numFetchThreads;
bs = find(arrayfun(@(a) isa(a.block, 'dagnn.BiasSamples'), net.layers)==1);
bopts.addBiasSamples = ~isempty(bs) ;
bopts.vgg16 = any(arrayfun(@(a) strcmp(a.name, 'relu5_1'), net.layers)==1) ;
% -------------------------------------------------------------------------
%                                                   Database initialization
% -------------------------------------------------------------------------
fprintf('loading imdb...');
if exist(opts.imdbPath,'file')==2
  imdb = load(opts.imdbPath) ;
else
  imdb = cnn_voc07_eb_setup_data('dataDir',opts.dataDir, ...
    'proposalDir',opts.proposalDir,'loadTest',1);
  save(opts.imdbPath,'-struct', 'imdb', '-v7.3');
end

fprintf('done\n');
minSize = 20;
imdb = fixBBoxes(imdb, minSize, opts.maxNumProposals);

VOCinit;
VOCopts.testset = 'test';
VOCopts.annopath = fullfile(opts.dataDir,'VOCdevkit','VOC2007','Annotations','%s.xml');
VOCopts.imgsetpath = fullfile(opts.dataDir,'VOCdevkit','VOC2007','ImageSets','Main','%s.txt');
VOCopts.localdir = fullfile(opts.dataDir,'VOCdevkit','local','VOC2007');
cats = VOCopts.classes;
ovTh = 0.4;
scTh = 1e-3;
% --------------------------------------------------------------------
%                                                               Detect
% --------------------------------------------------------------------
if strcmp(VOCopts.testset,'test')
  testIdx = find(imdb.images.set == 3);
elseif strcmp(VOCopts.testset,'trainval')
  testIdx = find(imdb.images.set < 3);
end
bopts.useGpu = numel(opts.gpu) >  0 ;

scores = cell(1,numel(testIdx));
boxes = imdb.images.boxes(testIdx);
names = imdb.images.name(testIdx);

detLayer = find(arrayfun(@(a) strcmp(a.name, 'xTimes'), net.vars)==1);
net.vars(detLayer(1)).precious = 1;
% run detection
start = tic ;
for t=1:numel(testIdx)
  batch = testIdx(t);  
  
  scoret = [];
  for s=1:numel(opts.imageScales)
    for f=1:2 % add flips
      inputs = getBatch(bopts, imdb, batch, opts.imageScales(s), f-1 );
      net.eval(inputs) ;
  
      if isempty(scoret)
        scoret = squeeze(gather(net.vars(detLayer).value));
      else
        scoret = scoret + squeeze(gather(net.vars(detLayer).value));
      end
    end
  end
  scores{t} = scoret;
  % show speed
  time = toc(start) ;
  n = t * 2 * numel(opts.imageScales) ; % number of images processed overall
  speed = n/time ;
  if mod(t,10)==0
    fprintf('test %d / %d speed %.1f Hz\n',t,numel(testIdx),speed);
  end
  
  
  if opts.vis
    for cls = 1:numel(cats)
      idx = (scores{t}(cls,:)>0.05);
      if sum(idx)==0, continue;end
        % divide by number of scales and flips
  
      im = imread(fullfile(imdb.imageDir,imdb.images.name{testIdx(t)}));
      boxest  = double(imdb.images.boxes{testIdx(t)}(idx,:));
      scorest = scores{t}(cls,idx)' / (2 * numel(opts.imageScales));
      boxesSc = [boxest,scorest];
      pick = nms(boxesSc, ovTh);
      boxesSc = boxesSc(pick,:);
      figure(1) ;
      im = bbox_draw(im,boxesSc(1,[2 1 4 3 5]));
      fprintf('%s %.2f',cats{cls},boxesSc(1,5));
     
      fprintf('\n') ;
      title(cats{cls});
      pause;

    end
  end  
end

dets.names  = names;
dets.scores = scores;
dets.boxes  = boxes;

% --------------------------------------------------------------------
%                                                PASCAL VOC evaluation
% --------------------------------------------------------------------

aps = zeros(numel(cats),1);
for cls = 1:numel(cats)
  
  vocDets.confidence = [];
  vocDets.bbox       = [];
  vocDets.ids        = [];

  for i=1:numel(dets.names)
    
    scores = double(dets.scores{i});
    boxes  = double(dets.boxes{i});
    
    boxesSc = [boxes,scores(cls,:)'];
    boxesSc = boxesSc(boxesSc(:,5)>scTh,:);
    pick = nms(boxesSc, ovTh);
    boxesSc = boxesSc(pick,:);
    
    vocDets.confidence = [vocDets.confidence;boxesSc(:,5)];
    vocDets.bbox = [vocDets.bbox;boxesSc(:,[2 1 4 3])];
    vocDets.ids = [vocDets.ids; repmat({dets.names{i}(1:6)},size(boxesSc,1),1)];
    
  end
  [rec,prec,ap] = wsddnVOCevaldet(VOCopts,cats{cls},vocDets,0);
  
  fprintf('%s %.1f\n',cats{cls},100*ap);
  aps(cls) = ap;
end

% --------------------------------------------------------------------
function inputs = getBatch(opts, imdb, batch, scale, flip)
% --------------------------------------------------------------------

opts.scale = scale;
opts.flip = flip;
is_vgg16 = opts.vgg16 ;
opts = rmfield(opts,'vgg16') ;

images = strcat([imdb.imageDir filesep], imdb.images.name(batch)) ;
opts.prefetch = (nargout == 0);

[im,rois] = wsddn_get_batch(images, imdb, batch, opts);


rois = single(rois');
if opts.useGpu > 0
  im = gpuArray(im) ;
  rois = gpuArray(rois) ;
end
rois = rois([1 3 2 5 4],:) ;


ss = [16 16] ;
if is_vgg16
  o0 = 8.5 ;
  o1 = 9.5 ;
else
  o0 = 18 ;
  o1 = 9.5 ;
end
rois = [ rois(1,:);
        floor((rois(2,:) - o0 + o1) / ss(1) + 0.5) + 1;
        floor((rois(3,:) - o0 + o1) / ss(2) + 0.5) + 1;
        ceil((rois(4,:) - o0 - o1) / ss(1) - 0.5) + 1;
        ceil((rois(5,:) - o0 - o1) / ss(2) - 0.5) + 1];

      
inputs = {'input', im, 'rois', rois} ;
  
  
if opts.addBiasSamples && isfield(imdb.images,'boxScores')
  boxScore = reshape(imdb.images.boxScores{batch},[1 1 1 numel(imdb.images.boxScores{batch})]);
  inputs{end+1} = 'boxScore';
  inputs{end+1} = boxScore ; 
end


% -------------------------------------------------------------------------
function imdb = fixBBoxes(imdb, minSize, maxNum)

for i=1:numel(imdb.images.name)
  bbox = imdb.images.boxes{i};
  % remove small bbox
  isGood = (bbox(:,3)>=bbox(:,1)+minSize) & (bbox(:,4)>=bbox(:,2)+minSize);
  bbox = bbox(isGood,:);
  % remove duplicate ones
  [dummy, uniqueIdx] = unique(bbox, 'rows', 'first');
  uniqueIdx = sort(uniqueIdx);
  bbox = bbox(uniqueIdx,:);
  % limit number for training
  if imdb.images.set(i)~=3
    nB = min(size(bbox,1),maxNum);
  else
    nB = size(bbox,1);
  end
  
  if isfield(imdb.images,'boxScores')
    imdb.images.boxScores{i} = imdb.images.boxScores{i}(isGood);
    imdb.images.boxScores{i} = imdb.images.boxScores{i}(uniqueIdx);
    imdb.images.boxScores{i} = imdb.images.boxScores{i}(1:nB);
  end
  imdb.images.boxes{i} = bbox(1:nB,:);
  %   [h,w,~] = size(imdb.images.data{i});
  %   imdb.images.boxes{i} = [1 1 h w];
  
end

%-------------------------------------------------------------------------%

function im = bbox_draw(im,boxes,c,t)

% copied from Ross Girshick
% Fast R-CNN
% Copyright (c) 2015 Microsoft
% Licensed under The MIT License [see LICENSE for details]
% Written by Ross Girshick
% --------------------------------------------------------
% source: https://github.com/rbgirshick/fast-rcnn/blob/master/matlab/showboxes.m
%
%
% Fast R-CNN
% 
% Copyright (c) Microsoft Corporation
% 
% All rights reserved.
% 
% MIT License
% 
% Permission is hereby granted, free of charge, to any person obtaining a
% copy of this software and associated documentation files (the "Software"),
% to deal in the Software without restriction, including without limitation
% the rights to use, copy, modify, merge, publish, distribute, sublicense,
% and/or sell copies of the Software, and to permit persons to whom the
% Software is furnished to do so, subject to the following conditions:
% 
% The above copyright notice and this permission notice shall be included
% in all copies or substantial portions of the Software.
% 
% THE SOFTWARE IS PROVIDED *AS IS*, WITHOUT WARRANTY OF ANY KIND, EXPRESS OR
% IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,
% FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL
% THE AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR
% OTHER LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE,
% ARISING FROM, OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR
% OTHER DEALINGS IN THE SOFTWARE.

image(im);
axis image;
axis off;
set(gcf, 'Color', 'white');

if nargin<3
  c = 'r';
  t = 2;
end

s = '-';
if ~isempty(boxes)
    x1 = boxes(:, 1);
    y1 = boxes(:, 2);
    x2 = boxes(:, 3);
    y2 = boxes(:, 4);
    line([x1 x1 x2 x2 x1]', [y1 y2 y2 y1 y1]', ...
        'color', c, 'linewidth', t, 'linestyle', s);
    for i = 1:size(boxes, 1)
        text(double(x1(i)), double(y1(i)) - 2, ...
            sprintf('%.4f', boxes(i, end)), ...
            'backgroundcolor', 'b', 'color', 'w', 'FontSize', 8);
    end
end


================================================
FILE: core/wsddn_train.m
================================================
function [net, info] = wsddn_train(varargin)
% @author: Hakan Bilen
% wsddn_train: training script for WSDDN

opts.dataDir = fullfile(vl_rootnn, 'data') ;
opts.expDir = fullfile(vl_rootnn, 'exp') ;
opts.imdbPath = fullfile(vl_rootnn, 'data', 'imdbs', 'imdb-eb.mat');
opts.modelPath = fullfile(vl_rootnn, 'models', 'imagenet-vgg-f.mat') ;
opts.proposalType = 'eb' ;
opts.proposalDir = fullfile(vl_rootnn, 'data', 'EdgeBoxes') ;


opts.addBiasSamples = 1; % add Box Scores
opts.addLossSmooth  = 1; % add Spatial Regulariser
opts.softmaxTempCls = 1; % softmax temp for cls
opts.softmaxTempDet = 2; % softmax temp for det
opts.maxScale = 2000 ;

% if you have limited gpu memory (<6gb), you can change the next 2 params
opts.maxNumProposals = inf; % limit number (eg 1500)
opts.imageScales = [480,576,688,864,1200]; % scales
opts.minBoxSize = 20; % minimum bounding box size
opts.train.gpus = [] ;
opts.train.continue = true ;
opts.train.prefetch = true ;
opts.train.learningRate = 1e-5 * [ones(1,10) 0.1*ones(1,10)] ;
opts.train.weightDecay = 0.0005;
opts.train.numEpochs = 20;
opts.train.derOutputs = {'objective', 1} ;

opts.numFetchThreads = 1 ;
opts = vl_argparse(opts, varargin) ;

display(opts);

opts.train.batchSize = 1 ;
opts.train.expDir = opts.expDir ;
opts.train.numEpochs = numel(opts.train.learningRate) ;
%% -------------------------------------------------------------------------
%                                                   Database initialization
% -------------------------------------------------------------------------
fprintf('loading imdb...');
if exist(opts.imdbPath,'file')==2
  imdb = load(opts.imdbPath) ;
else
  if strcmp(opts.proposalType,'ssw')
    imdb = setup_voc07_ssw('dataDir',opts.dataDir, ...
      'proposalDir',opts.proposalDir,'loadTest',1);
  elseif strcmp(opts.proposalType,'eb')
    imdb = setup_voc07_eb('dataDir',opts.dataDir, ...
      'proposalDir',opts.proposalDir,'loadTest',1);
  else
    error('undefined proposal type %s\n',opts.proposalType)
  end
  
  imdbFolder = fileparts(opts.imdbPath);
  
  if ~exist(imdbFolder,'dir')
    mkdir(imdbFolder);
  end
  save(opts.imdbPath,'-struct', 'imdb', '-v7.3');
end

fprintf('done\n');

imdb = fixBBoxes(imdb, opts.minBoxSize, opts.maxNumProposals);

% use train + val for training
imdb.images.set(imdb.images.set == 2) = 1;
trainIdx = find(imdb.images.set == 1);

%% Compute image statistics (mean, RGB covariances, etc.)
imageStatsPath = fullfile(opts.dataDir, 'imageStats.mat') ;
if exist(imageStatsPath,'file')
  load(imageStatsPath, 'averageImage', 'rgbMean', 'rgbCovariance') ;
else
 
  images = imdb.images.name(imdb.images.set == 1) ;
  images = strcat([imdb.imageDir filesep],images) ;
  
  [averageImage, rgbMean, rgbCovariance] = getImageStats(images, ...
    'imageSize', [256 256], ...
    'numThreads', opts.numFetchThreads, ...
    'gpus', opts.train.gpus) ;
  save(imageStatsPath, 'averageImage', 'rgbMean', 'rgbCovariance') ;
end
[v,d] = eig(rgbCovariance) ;
rgbDeviation = v*sqrt(d) ;
clear v d ;


%% ------------------------------------------------------------------------
%                                                    Network initialization
% -------------------------------------------------------------------------
nopts.addBiasSamples = opts.addBiasSamples; % add Box Scores (only with Edge Boxes)
nopts.addLossSmooth  = opts.addLossSmooth; % add Spatial Regulariser
nopts.softmaxTempCls = opts.softmaxTempCls; % softmax temp for cls
nopts.softmaxTempDet = opts.softmaxTempDet; % softmax temp for det

nopts.averageImage = reshape(rgbMean,[1 1 3]) ;
% nopts.rgbVariance = 0.1 * rgbDeviation ;
nopts.rgbVariance = [] ;
nopts.numClasses = numel(imdb.classes.name) ;
nopts.classNames = imdb.classes.name ;

if ~exist(opts.modelPath,'file')
  [pname,fname,ext]  = fileparts(opts.modelPath) ;
  if ~exist(pname,'dir')
    mkdir(pname) ;
  end
  fprintf('Downloading %s to %s\n', [fname ext], pname) ;
  urlwrite(sprintf('http://www.vlfeat.org/matconvnet/models/%s',[fname ext]),...
    opts.modelPath) ;
end

net = load(opts.modelPath);
net = wsddn_init(net,nopts);

if nopts.addLossSmooth
  opts.train.derOutputs = {'objective', 1, 'lossTopB', 1e-4} ;
end


if ~exist(opts.expDir,'dir')
  mkdir(opts.expDir) ;
end

%% -------------------------------------------------------------------------
%                                                   Database stats
% -------------------------------------------------------------------------
bopts = net.meta.normalization;
net.meta.augmentation.jitterBrightness = 0 ;
% bopts.interpolation = 'bilinear';
bopts.jitterBrightness = net.meta.augmentation.jitterBrightness ;
bopts.imageScales = opts.imageScales;
bopts.numThreads = opts.numFetchThreads;
bopts.addLossSmooth = opts.addLossSmooth;
bopts.addBiasSamples = opts.addBiasSamples;
bopts.maxScale = opts.maxScale ;
bopts.vgg16 = any(arrayfun(@(a) strcmp(a.name, 'relu5_1'), net.layers)==1) ;
%% -------------------------------------------------------------------
%                                                                Train
% --------------------------------------------------------------------
% avoid test data
valIdx = find(imdb.images.set == 3);
valIdx = valIdx(1:5:end) ;
% valIdx = [];

%% 
bopts.useGpu = numel(opts.train.gpus) >  0 ;
bopts.prefetch = opts.train.prefetch;

info = cnn_train_dag(net, imdb, @(i,b) ...
  getBatch(bopts,i,b), ...
  opts.train, 'train', trainIdx, ...
  'val', valIdx) ;

%% -------------------------------------------------------------------
%                                                       Deploy network
% --------------------------------------------------------------------
if ~exist(fullfile(opts.expDir,'net.mat'),'file')
  removeLoss = {'dagnn.Loss','dagnn.DropOut'};
  for i=1:numel(removeLoss)
    dagRemoveLayersOfType(net,removeLoss{i}) ;
  end
  
  net.mode = 'test' ;
  net_ = net ;
  net = net_.saveobj() ;
  save(fullfile(opts.expDir,'net.mat'), '-struct','net');
end
% --------------------------------------------------------------------
function inputs = getBatch(opts, imdb, batch)
% --------------------------------------------------------------------
if isempty(batch)
  inputs = {'input', [], 'label', [], 'rois', [], 'ids', []};
  return;
end

opts.scale = opts.imageScales(randi(numel(opts.imageScales)));
opts.flip = randi(2,numel(batch),1)-1; % random flip
is_vgg16 = opts.vgg16 ;
opts = rmfield(opts,'vgg16') ;

images = strcat([imdb.imageDir filesep], imdb.images.name(batch)) ;
opts.prefetch = (nargout == 0);

[im,rois] = wsddn_get_batch(images, imdb, batch, opts);

if nargout>0
  rois = single(rois') ;
  labels = imdb.images.label(:,batch) ;
  labels = reshape(labels,[1 1 size(labels,1) numel(batch)]);

  if opts.useGpu > 0
    im = gpuArray(im) ;
    rois = gpuArray(rois) ;
  end

  if ~isempty(rois)
   rois = rois([1 3 2 5 4],:) ;
  end

  ss = [16 16] ;

  if is_vgg16
    o0 = 8.5 ;
    o1 = 9.5 ;
  else
    o0 = 18 ;
    o1 = 9.5 ;
  end

  rois = [ rois(1,:); ...
    floor((rois(2,:) - o0 + o1) / ss(1) + 0.5) + 1;
    floor((rois(3,:) - o0 + o1) / ss(2) + 0.5) + 1;
    ceil((rois(4,:) - o0 - o1) / ss(1) - 0.5) + 1;
    ceil((rois(5,:) - o0 - o1) / ss(2) - 0.5) + 1];


  inputs = {'input', im, 'label', labels, 'rois', rois, 'ids', batch} ;

  if opts.addLossSmooth
    inputs{end+1} = 'boxes' ;
    inputs{end+1} = imdb.images.boxes{batch} ;
  end

  if opts.addBiasSamples==1
    boxScore = reshape(imdb.images.boxScores{batch},[1 1 1 numel(imdb.images.boxScores{batch})]);
    inputs{end+1} = 'boxScore';
    inputs{end+1} = boxScore ;
  end
end

% -------------------------------------------------------------------------
function imdb = fixBBoxes(imdb, minSize, maxNum)
% -------------------------------------------------------------------------
for i=1:numel(imdb.images.name)
  bbox = imdb.images.boxes{i};
  % remove small bbox
  isGood = (bbox(:,3)>=bbox(:,1)+minSize) & (bbox(:,4)>=bbox(:,2)+minSize);
  bbox = bbox(isGood,:);
  % remove duplicate ones
  [dummy, uniqueIdx] = unique(bbox, 'rows', 'first');
  uniqueIdx = sort(uniqueIdx);
  bbox = bbox(uniqueIdx,:);
  % limit number for training
  if imdb.images.set(i)~=3
    nB = min(size(bbox,1),maxNum);
  else
    nB = size(bbox,1);
  end
  
  if isfield(imdb.images,'boxScores')
    imdb.images.boxScores{i} = imdb.images.boxScores{i}(isGood);
    imdb.images.boxScores{i} = imdb.images.boxScores{i}(uniqueIdx);
    imdb.images.boxScores{i} = imdb.images.boxScores{i}(1:nB);
  end
  imdb.images.boxes{i} = bbox(1:nB,:);
  %   [h,w,~] = size(imdb.images.data{i});
  %   imdb.images.boxes{i} = [1 1 h w];
  
end

% -------------------------------------------------------------------------
function layers = dagFindLayersOfType(net, type)
% -------------------------------------------------------------------------
layers = [] ;
for l = 1:numel(net.layers)
  if isa(net.layers(l).block, type)
    layers{1,end+1} = net.layers(l).name ;
  end
end
% -------------------------------------------------------------------------
function dagRemoveLayersOfType(net, type)
% -------------------------------------------------------------------------
names = dagFindLayersOfType(net, type) ;
for i = 1:numel(names)
  layer = net.layers(net.getLayerIndex(names{i})) ;
  net.removeLayer(names{i}) ;
  net.renameVar(layer.outputs{1}, layer.inputs{1}, 'quiet', true) ;
end


================================================
FILE: matlab/+dagnn/BiasSamples.m
================================================
classdef BiasSamples < dagnn.ElementWise
  % @author: Hakan Bilen
  properties
    scale = single(1)
  end
  properties (Transient)
    boxCoefs = []
  end
  methods
    function outputs = forward(obj, inputs, params)
      if numel(inputs) ~= 2
        error('Number of inputs is not 2');
      end
      obj.boxCoefs = single(1)+obj.scale*inputs{2};
      outputs{1} = bsxfun(@times,inputs{1},obj.boxCoefs);
    end
    
    function [derInputs, derParams] = backward(obj, inputs, params, derOutputs)
      derInputs = cell(1,2) ;
      obj.boxCoefs = single(1)+obj.scale*inputs{2};
      derInputs{1} = bsxfun(@times,derOutputs{1},obj.boxCoefs) ;
      derParams = {} ;
    end
    
    function obj = BiasSamples(varargin)
      obj.load(varargin) ;
    end
    
    function reset(obj)
      obj.boxCoefs = [] ;
    end
    
    function rfs = getReceptiveFields(obj)
      rfs.size = [1 1] ;
      rfs.stride = [1 1] ;
      rfs.offset = [1 1] ;
    end

    function outputSizes = getOutputSizes(obj, inputSizes)
      outputSizes = inputSizes(1) ;
    end
    
  end
  
end


================================================
FILE: matlab/+dagnn/LayerAP.m
================================================
classdef LayerAP < dagnn.Loss
  % @author: Hakan Bilen
  % 11 step average precision
  properties
    cls_index = 1
    resetLayer = false 
    gtLabels = []
    scores   = []
    ids      = []
    aps      = []
    voc07    = true % 11 step
    classNames = {} 
  end


  methods
    function outputs = forward(obj, inputs, params)
      if obj.resetLayer 
        obj.gtLabels = [] ;
        obj.scores   = [] ;
        obj.ids      = [] ;
        obj.aps      = [] ;
        obj.resetLayer = false ;
      end
      
      if numel(inputs)==2
        obj.scores = [obj.scores gather(squeeze(inputs{1}(:,:,obj.cls_index,:)))];
        obj.gtLabels = [obj.gtLabels gather(squeeze(inputs{2}(:,:,obj.cls_index,:)))];
      elseif numel(inputs)>2
        scoresCur = gather(squeeze(inputs{1}(:,:,obj.cls_index,:)));
        gtLabelsCur = gather(squeeze(inputs{2}(:,:,obj.cls_index,:)));
        
        idsCur = gather(squeeze(inputs{3}));
        
        [lia,locb] = ismember(idsCur,obj.ids);
        
        if any(lia)
          obj.scores = [obj.scores scoresCur(~lia,:)];
          obj.gtLabels = [obj.gtLabels gtLabelsCur(~lia,:)];
          obj.ids = [obj.ids(:) ; idsCur(~lia,:)];
          
          nz = find(lia);
          for i=1:numel(nz)
            obj.scores(locb(nz(i)),:) = obj.scores(locb(nz(i)),:) + ...
              scoresCur(nz(i),:);
          end
        else
          obj.scores = [obj.scores scoresCur];
          obj.gtLabels = [obj.gtLabels gtLabelsCur];
          obj.ids = [obj.ids(:) ; idsCur]';
        end
      else
        error('wrong number of inputs');
      end
      
      obj.aps = obj.compute_average_precision();
      obj.average = 100 * mean(obj.aps);
      outputs{1} =  100 * mean(obj.aps);
    end

    function [derInputs, derParams] = backward(obj, inputs, params, derOutputs)
      derInputs = cell(1,numel(inputs));
      derInputs{1} = derOutputs{1} ;
      derParams = {} ;
    end

    function reset(obj)
      obj.resetLayer = true ;
%       obj.average = 0 ;
%       obj.aps = 0 ;
%       obj.gtLabels = [];
%       obj.scores   = [];
%       obj.ids      = [];
    end

    function printAP(obj)
      if isempty(obj.classNames)
        for i=1:numel(obj.aps)
          fprintf('class-%d %.1f\n',i,100*obj.aps(i)) ;
        end
      else
        for i=1:numel(obj.aps)
          fprintf('%-50s %.1f\n',obj.classNames{i},100*obj.aps(i)) ;
        end
      end
    end
    
    function aps = compute_average_precision(obj)
      assert(all(size(obj.scores)==size(obj.gtLabels)));
      % nImg = size(obj.scores,1);
      nCls = numel(obj.cls_index);

      aps = zeros(1,nCls);

      for c=1:nCls
        gt = obj.gtLabels(c,:);
        conf = obj.scores(c,:) ;
        if sum(gt>0)==0, continue ; end
        
        % compute average precision
        if obj.voc07
          [rec,prec,ap]=obj.VOC07ap(conf,gt) ;
        else
          [rec,prec,ap]=obj.THUMOSeventclspr(conf,gt) ;
        end
        aps(c) = ap;
      end
    end

    function [rec,prec,ap]=VOC07ap(obj,conf,gt)
      [~,si]=sort(-conf);
      tp=gt(si)>0;
      fp=gt(si)<0;
      
      fp=cumsum(fp);
      tp=cumsum(tp);
      
      rec=tp/sum(gt>0);
      prec=tp./(fp+tp);
      ap=0;
      for t=0:0.1:1
        p=max(prec(rec>=t));
        if isempty(p)
          p=0;
        end
        ap=ap+p/11;
      end
    end
    
    function [rec,prec,ap]=THUMOSeventclspr(obj,conf,gt)
      [so,sortind]=sort(-conf);
      tp=gt(sortind)==1;
      fp=gt(sortind)~=1;
      npos=length(find(gt==1));
      
      % compute precision/recall
      fp=cumsum(fp);
      tp=cumsum(tp);
      rec=tp/npos;
      prec=tp./(fp+tp);
      
      % compute average precision
      
      ap=0;
      tmp=gt(sortind)==1;
      for i=1:length(conf)
        if tmp(i)==1
          ap=ap+prec(i);
        end
      end
      ap=ap/npos;
    end
    
    function obj = LayerAP(varargin)
      obj.load(varargin) ;
      obj.loss = 'average_precision' ;
    end
  end
end


================================================
FILE: matlab/+dagnn/LossTopBoxSmoothProb.m
================================================
classdef LossTopBoxSmoothProb < dagnn.Loss
  % given top scoring box, it finds other boxes with at least overlap of
  % minOverlap and calculates the euclidean dist between top and other
  % boxes
  
  properties (Transient)
    gtIdx = []
    boxIdx = []
    probs = []
    minOverlap = 0.5
    nBoxes = 10
  end
  
  methods
    function outputs = forward(obj, inputs, params)
      if numel(inputs) ~= 4
        error('Number of inputs is not 2');
      end
      obj.gtIdx = [];
      obj.boxIdx = [];
      obj.probs = [];
      boxes  = double(gather(inputs{2})');
      scores = gather(squeeze(inputs{3}));
      labels = gather(squeeze(inputs{4}));
      
      if numel(boxes)<5
        return;
      end
      
      outputs{1} = zeros(1,'like',inputs{1});
      for c=1:numel(labels)
        if labels(c)<=0
          continue;
        end
        
        [so, si] = sort(scores(c,:),'descend');
        obj.gtIdx{c} = si(1);
        gtBox = boxes(:,obj.gtIdx{c});
        gtArea = (gtBox(3)-gtBox(1)+1) .* (gtBox(4)-gtBox(2)+1);
        
        bbs = boxes(:,si(2:min(obj.nBoxes,end)))';
        
        y1 = bbs(:,1);
        x1 = bbs(:,2);
        y2 = bbs(:,3);
        x2 = bbs(:,4);
        
        area = (x2-x1+1) .* (y2-y1+1);
        
        yy1 = max(gtBox(1), y1);
        xx1 = max(gtBox(2), x1);
        yy2 = min(gtBox(3), y2);
        xx2 = min(gtBox(4), x2);
        
        w = max(0.0, xx2-xx1+1);
        h = max(0.0, yy2-yy1+1);
        
        inter = w.*h;
        o = find((inter ./ (gtArea + area - inter))>obj.minOverlap);
        
        if isempty(o)
          continue;
        end
        
        obj.boxIdx{c} = si(o+1);
        obj.probs{c} = so(o+1);
        d = bsxfun(@minus,inputs{1}(:,:,:,obj.boxIdx{c}),inputs{1}(:,:,:,obj.gtIdx{c}));
        d = bsxfun(@times,d,obj.probs{c});
        outputs{1} = outputs{1} + 0.5 * sum(d(:).^2);
      end
      
      n = obj.numAveraged ;
      m = n + 1 ;
      obj.average = (n * obj.average + gather(outputs{1})) / m ;
      obj.numAveraged = m ;
    end
    
    function [derInputs, derParams] = backward(obj, inputs, params, derOutputs)
      derInputs = cell(1,4) ;
      derInputs{1} = zeros(size(inputs{1}),'like',inputs{1});
      for c=1:numel(obj.boxIdx)
        if isempty(obj.boxIdx{c}), continue; end
        derInputs{1}(:,:,:,obj.boxIdx{c}) = ...
          bsxfun(@minus,inputs{1}(:,:,:,obj.boxIdx{c}),inputs{1}(:,:,:,obj.gtIdx{c}));
        derInputs{1}(:,:,:,obj.boxIdx{c}) = bsxfun(@times,...
          reshape(obj.probs{c},[1 1 1 numel(obj.probs{c})]),derInputs{1}(:,:,:,obj.boxIdx{c}));
        derInputs{1}(:,:,:,obj.gtIdx{c}) = -sum(derInputs{1}(:,:,:,obj.boxIdx{c}),4);

      end
      derInputs{1} = derInputs{1} * derOutputs{1};
%       fprintf('LossTopBox l2 %f ',sqrt(sum(derInputs{1}(:).^2)));
      derParams = {} ;
    end
    
    function obj = LossTopBoxSmoothProb(varargin)
      obj.load(varargin) ;
      obj.loss = 'LossTopBoxSmoothProb';
    end
    
    function reset(obj)
      obj.gtIdx = [];
      obj.boxIdx = [];
      obj.probs = [];
      obj.average = 0 ;
      obj.numAveraged = 0 ;
    end
    
    
  end
  
end


================================================
FILE: matlab/+dagnn/SoftMax2.m
================================================
classdef SoftMax2 < dagnn.ElementWise
  % @author: Hakan Bilen
  % Softmax2 : it is a more generic softmax layer with a dimension and temperature parameter
  properties
    dim = 3;
    temp = 1;
    scale = 1;
  end
  
  methods
    function outputs = forward(self, inputs, params)
      inputs{1} = inputs{1} / self.temp;
      order = 1:numel(size(inputs{1}));
      if self.dim~=3
        order([3 self.dim]) = [self.dim 3];
        inputs{1} = permute(inputs{1},order);
      end
      outputs{1} = vl_nnsoftmax(inputs{1}) ;
      if self.dim~=3
        outputs{1} = permute(outputs{1},order) ;
      end
    end
    
    function [derInputs, derParams] = backward(self, inputs, params, derOutputs)
      
      inputs{1} = inputs{1} / self.temp;
      order = 1:numel(size(inputs{1}));
      if self.dim~=3
        order(3) = self.dim;
        order(self.dim) = 3;
        inputs{1} = permute(inputs{1},order);
        derOutputs{1} = permute(derOutputs{1},order);
      end
      
      derInputs{1} = vl_nnsoftmax(inputs{1}, derOutputs{1}) ;
      if self.dim~=3
        derInputs{1} = permute(derInputs{1},order) ;
      end
      derParams = {} ;
    end
    
    function obj = SoftMax2(varargin)
      obj.load(varargin) ;
      obj.dim   = single(obj.dim);
      obj.temp  = single(obj.temp);
      obj.scale = single(obj.scale);
    end
  end
end



================================================
FILE: matlab/+dagnn/SumOverDim.m
================================================
classdef SumOverDim < dagnn.ElementWise
  % @author: Hakan Bilen
  % SumOverDim is the sum of the elements of inputs{1} over dimension dim
  properties 
    dim = 3;
  end
  
  methods
    function outputs = forward(obj, inputs, params)
      outputs{1} = sum(inputs{1},obj.dim) ;
    end

    function [derInputs, derParams] = backward(obj, inputs, params, derOutputs)
      
      ndims = ones(1,numel(size(inputs{1})));
      ndims(obj.dim) = size(inputs{1},obj.dim); 
      derInputs{1} = repmat(derOutputs{1},ndims);
      
      derParams = {} ;
    end

    function outputSizes = getOutputSizes(obj, inputSizes)
      outputSizes{1} = inputSizes{1} ;
      outputSizes{1}(obj.dim) = 1;
    end

    function obj = SumOverDim(varargin)
      obj.load(varargin) ;
      obj.dim = obj.dim;
    end
  end
end


================================================
FILE: matlab/+dagnn/Times.m
================================================
classdef Times < dagnn.ElementWise
  % @author: Hakan Bilen
  % Times (multiply) DagNN layer
  %   The Times layer takes the multiplication of two inputs and store the result
  %   as its only output.
  methods
    function outputs = forward(obj, inputs, params)
      if numel(inputs) ~= 2
        error('Number of inputs is not 2');
      end
      outputs{1} = inputs{1} .* inputs{2} ;
    end
    
    function [derInputs, derParams] = backward(obj, inputs, params, derOutputs)
      derInputs = cell(1,2) ;
      derInputs{1} = derOutputs{1} .* inputs{2}  ;
      derInputs{2} = derOutputs{1} .* inputs{1}  ;
      derParams = {} ;
    end
    
    function obj = Times(varargin)
      obj.load(varargin) ;
    end
    
    function rfs = getReceptiveFields(obj)
      rfs.size = [1 1] ;
      rfs.stride = [1 1] ;
      rfs.offset = [1 1] ;
    end

    function outputSizes = getOutputSizes(obj, inputSizes)
      outputSizes = inputSizes(1) ;
    end
  end
  
end

================================================
FILE: pascal/nms.m
================================================
function pick = nms(boxes, overlap)
% top = nms(boxes, overlap)
% Non-maximum suppression. (FAST VERSION)
% Greedily select high-scoring detections and skip detections
% that are significantly covered by a previously selected
% detection.
%
% NOTE: This is adapted from Pedro Felzenszwalb's version (nms.m),
% but an inner loop has been eliminated to significantly speed it
% up in the case of a large number of boxes

% Copyright (C) 2011-12 by Tomasz Malisiewicz
% All rights reserved.
%
% This file is part of the Exemplar-SVM library and is made
% available under the terms of the MIT license (see COPYING file).
% Project homepage: https://github.com/quantombone/exemplarsvm


if isempty(boxes)
  pick = [];
  return;
end

x1 = boxes(:,1);
y1 = boxes(:,2);
x2 = boxes(:,3);
y2 = boxes(:,4);
if size(boxes,2)==4
  s = ones(1,size(boxes,1));
else
  s = boxes(:,end);
end

area = (x2-x1+1) .* (y2-y1+1);
[~, I] = sort(s);

pick = s*0;
counter = 1;
while ~isempty(I)
  last = length(I);
  i = I(last);
  pick(counter) = i;
  counter = counter + 1;
  
  xx1 = max(x1(i), x1(I(1:last-1)));
  yy1 = max(y1(i), y1(I(1:last-1)));
  xx2 = min(x2(i), x2(I(1:last-1)));
  yy2 = min(y2(i), y2(I(1:last-1)));
  
  w = max(0.0, xx2-xx1+1);
  h = max(0.0, yy2-yy1+1);
  
  inter = w.*h;
  o = inter ./ (area(i) + area(I(1:last-1)) - inter);
  
%   I = I(find(o<=overlap));
  I = I((o<=overlap));
end

pick = pick(1:(counter-1));


================================================
FILE: pascal/setup_voc07_eb.m
================================================
function imdb = setup_voc07_eb(varargin)
% cnn_voc07_eb_setup_data  Initialize PASCAL VOC2007 data with edge
% boxes

% Warning! boxes are in the format of ([y1 x1 y2 x2])

opts.dataDir = fullfile('data') ;
opts.proposalDir = fullfile(opts.dataDir,'EB');
opts.loadTest = 1;
opts = vl_argparse(opts, varargin) ;

% -------------------------------------------------------------------------
%                                                 Load selective search win
% -------------------------------------------------------------------------
%% Get selective search windows
files = {'EdgeBoxesVOC2007trainval.mat', ...
  'EdgeBoxesVOC2007test.mat'} ;

if ~exist(opts.proposalDir, 'dir')
  mkdir(opts.proposalDir) ;
end

for i=1:numel(files)
  outPath = fullfile(opts.proposalDir, files{i}) ;
  if ~exist(outPath, 'file')
    url = sprintf('http://groups.inf.ed.ac.uk/hbilen-data/data/WSDDN/%s',files{i}) ;
    fprintf('Downloading %s to %s\n', url, outPath) ;
    urlwrite(url,outPath) ;
  end
end


if ~isempty(opts.proposalDir)
  t1 = load([opts.proposalDir,filesep,files{1}]);
  if opts.loadTest
    t2 = load([opts.proposalDir,filesep,files{2}]);
    ssw.id = [str2double(t1.images) str2double(t2.images)];
    ssw.boxes = cat(2,t1.boxes,t2.boxes);
    ssw.boxScores = cat(2,t1.boxScores,t2.boxScores);
  else
    ssw.id = str2double(t1.images);
    ssw.boxes = t1.boxes;
    ssw.boxScores = t1.boxScores;
  end
  
  [~,si] = sort(ssw.id);
  ssw.id = ssw.id(si);
  ssw.boxes = ssw.boxes(si);
  ssw.boxScores = ssw.boxScores(si);
end

% -------------------------------------------------------------------------
%                                                  Load categories metadata
% -------------------------------------------------------------------------
cats = {'aeroplane','bicycle','bird','boat','bottle','bus','car',...
  'cat','chair','cow','diningtable','dog','horse','motorbike','person',...
  'pottedplant','sheep','sofa','train','tvmonitor'};

if ~exist(opts.dataDir,'dir')
  error('wrong data folder!');
end

% Download VOC Devkit and data
if ~exist(fullfile(opts.dataDir,'VOCdevkit'),'dir')
  files = {'VOCtest_06-Nov-2007.tar',...
           'VOCtrainval_06-Nov-2007.tar',...
           'VOCdevkit_08-Jun-2007.tar'} ;
  for i=1:numel(files)
    if ~exist(fullfile(opts.dataDir, files{i}), 'file')
      outPath = fullfile(opts.dataDir,files{i}) ;
      url = sprintf('http://host.robots.ox.ac.uk/pascal/VOC/voc2007/%s',files{i}) ;
      fprintf('Downloading %s to %s\n', url, outPath) ;
      urlwrite(url,outPath) ;
      untar(outPath,opts.dataDir);
    end
  end
end
addpath(fullfile(opts.dataDir, 'VOCdevkit', 'VOCcode'));

traindata = importdata(fullfile(opts.dataDir,'VOCdevkit','VOC2007','ImageSets','Main','train.txt'));
valdata = importdata(fullfile(opts.dataDir,'VOCdevkit','VOC2007','ImageSets','Main','val.txt'));
testdata = importdata(fullfile(opts.dataDir,'VOCdevkit','VOC2007','ImageSets','Main','test.txt'));

assert(numel(traindata)==2501);
assert(numel(valdata)==2510);
assert(numel(testdata)==4952);

imdb.classes.name = cats ;
imdb.classes.description = cats ;
imdb.imageDir = fullfile(opts.dataDir, fullfile('VOCdevkit','VOC2007','JPEGImages')) ;

% -------------------------------------------------------------------------
%                                                           Training images
% -------------------------------------------------------------------------%
names = cell(1,numel(traindata));
labels = zeros(numel(traindata),numel(cats));


% load image names
for t=1:numel(traindata)
  names{t} = sprintf('%06d.jpg',traindata(t));
  %   data{t} = imread(sprintf('%s/%s',imdb.imageDir,names{t}));
end

% load binary labels
for c=1:numel(cats)
  t = importdata(fullfile(opts.dataDir,'VOCdevkit','VOC2007','ImageSets','Main',[cats{c},'_train.txt']));
  labels(:,c) = t(:,2);
end

imdb.images.id = traindata';
imdb.images.name = names ;
imdb.images.set = ones(1, numel(names)) ;
imdb.images.label = labels' ;
% imdb.images.data = data;

% -------------------------------------------------------------------------
%                                                         Validation images
% -------------------------------------------------------------------------

names = cell(1,numel(valdata));
labels = zeros(numel(valdata),numel(cats));
% data = cell(1,numel(valdata));

% load image names
for t=1:numel(valdata)
  names{t} = sprintf('%06d.jpg',valdata(t));
  %   data{t} = imread(sprintf('%s/%s',imdb.imageDir,names{t}));
end

% load binary labels
for c=1:numel(cats)
  t = importdata(fullfile(opts.dataDir,'VOCdevkit','VOC2007','ImageSets','Main',[cats{c},'_val.txt']));
  labels(:,c) = t(:,2);
end


imdb.images.id = horzcat(imdb.images.id, valdata') ;
imdb.images.name = horzcat(imdb.images.name, names) ;
imdb.images.set = horzcat(imdb.images.set, 2*ones(1,numel(names))) ;
imdb.images.label = horzcat(imdb.images.label, labels') ;
% imdb.images.data = horzcat(imdb.images.data, data) ;

% % -------------------------------------------------------------------------
% %                                                               Test images
% % -------------------------------------------------------------------------
%
%
if opts.loadTest
  names = cell(1,numel(testdata));
  labels = zeros(numel(testdata),numel(cats));
  % data = cell(1,numel(testdata));
  
  % load image names
  for t=1:numel(testdata)
    names{t} = sprintf('%06d.jpg',testdata(t));
    %   data{t} = imread(sprintf('%s/%s',imdb.imageDir,names{t}));
  end
  
  % load binary labels
  for c=1:numel(cats)
    t = importdata(fullfile(opts.dataDir,'VOCdevkit','VOC2007','ImageSets','Main',[cats{c},'_test.txt']));
    labels(:,c) = t(:,2);
  end
  
  imdb.images.id = horzcat(imdb.images.id, testdata') ;
  imdb.images.name = horzcat(imdb.images.name, names) ;
  imdb.images.set = horzcat(imdb.images.set, 3 * ones(1,numel(names))) ;
  imdb.images.label = horzcat(imdb.images.label, labels') ;
  % imdb.images.data = horzcat(imdb.images.data, data) ;
end
% -------------------------------------------------------------------------
%                                                            Postprocessing
% -------------------------------------------------------------------------
[~,sorti] = sort(imdb.images.id);


imdb.images.id = imdb.images.id(sorti);
imdb.images.name = imdb.images.name(sorti) ;
imdb.images.set = imdb.images.set(sorti) ;
imdb.images.label = single(imdb.images.label(:,sorti)) ;
imdb.images.size = zeros(numel(imdb.images.name),2);

if ~isempty(opts.proposalDir)
  imdb.images.boxes = ssw.boxes;
  imdb.images.boxScores = ssw.boxScores;
  assert(all(ssw.id==imdb.images.id));
end

% this is zero as scores of selective search windows are not much
% informative
if ~isempty(opts.proposalDir)
  % imdb.images.boxScores = cell(size(imdb.images.boxes));
  for i=1:numel(imdb.images.boxes)
    imdb.images.boxes{i} = int16(imdb.images.boxes{i});
    imdb.images.boxScores{i} = single(imdb.images.boxScores{i});
    
    imf = imfinfo(fullfile(imdb.imageDir,imdb.images.name{i}));
    imdb.images.size(i,:) = [imf.Height,imf.Width];
    
    maxBoxes = max(imdb.images.boxes{i});
    if imdb.images.size(i,1)< max(maxBoxes([1,3]))
      error('Wrong box coordinates');
    end
    if imdb.images.size(i,2)< max(maxBoxes([2,4]))
      error('Wrong box coordinates');
    end
    
  end
end
end


================================================
FILE: pascal/setup_voc07_ssw.m
================================================
function imdb = setup_voc07_ssw(varargin)
% setup_voc07_ssw  Initialize PASCAL VOC2007 data with selective
% search windows 

% Warning! boxes are in the format of ([y1 x1 y2 x2])

opts.dataDir = fullfile('data') ;
opts.proposalDir = fullfile(opts.dataDir,'SSW');
opts.loadTest = 1;
opts = vl_argparse(opts, varargin) ;

% -------------------------------------------------------------------------
%                                                 Load selective search win
% -------------------------------------------------------------------------
%% get selective search windows
files = {'SelectiveSearchVOC2007trainval.mat', ...
  'SelectiveSearchVOC2007test.mat'} ;

if ~exist(opts.proposalDir, 'dir')
  mkdir(opts.proposalDir) ;
end

for i=1:numel(files)
  if ~exist(fullfile(opts.proposalDir, files{i}), 'file')
    url = sprintf('http://koen.me/research/downloads/%s',files{i}) ;
    fprintf('downloading %s\n', url) ;
    urlwrite(url,[opts.proposalDir filesep files{i}]);
  end
end

if ~isempty(opts.proposalDir)
  t1 = load([opts.proposalDir,filesep,files{1}]);
  if opts.loadTest
    t2 = load([opts.proposalDir,filesep,files{2}]);
    ssw.id = [str2double(t1.images);str2double(t2.images)]';
    ssw.boxes = cat(2,t1.boxes,t2.boxes);
  else
    ssw.id = str2double(t1.images)';
    ssw.boxes = t1.boxes;
  end

  [~,si] = sort(ssw.id);
  ssw.id = ssw.id(si);
  ssw.boxes = ssw.boxes(si);
end

% -------------------------------------------------------------------------
%                                                  Load categories metadata
% -------------------------------------------------------------------------
cats = {'aeroplane','bicycle','bird','boat','bottle','bus','car',...
  'cat','chair','cow','diningtable','dog','horse','motorbike','person',...
  'pottedplant','sheep','sofa','train','tvmonitor'};
    
if ~exist(opts.dataDir,'dir')
  error('wrong data folder!');
end

if ~exist(opts.dataDir,'dir')
  error('wrong data folder!');
end

% Download VOC Devkit and data
if ~exist(fullfile(opts.dataDir,'VOCdevkit'),'dir')
  files = {'VOCtest_06-Nov-2007.tar',...
           'VOCtrainval_06-Nov-2007.tar',...
           'VOCdevkit_08-Jun-2007.tar'} ;
  for i=1:numel(files)
    if ~exist(fullfile(opts.dataDir, files{i}), 'file')
      outPath = fullfile(opts.dataDir,files{i}) ;
      url = sprintf('http://host.robots.ox.ac.uk/pascal/VOC/voc2007/%s',files{i}) ;
      fprintf('Downloading %s to %s\n', url, outPath) ;
      urlwrite(url,outPath) ;
      untar(outPath,opts.dataDir);
    end
  end
end
addpath(fullfile(opts.dataDir, 'VOCdevkit', 'VOCcode'));

traindata = importdata(fullfile(opts.dataDir,'VOCdevkit','VOC2007','ImageSets','Main','train.txt'));
valdata = importdata(fullfile(opts.dataDir,'VOCdevkit','VOC2007','ImageSets','Main','val.txt'));
testdata = importdata(fullfile(opts.dataDir,'VOCdevkit','VOC2007','ImageSets','Main','test.txt'));

assert(numel(traindata)==2501);
assert(numel(valdata)==2510);
assert(numel(testdata)==4952);

imdb.classes.name = cats ;
imdb.classes.description = cats ;
imdb.imageDir = fullfile(opts.dataDir, fullfile('VOCdevkit','VOC2007','JPEGImages')) ;

% -------------------------------------------------------------------------
%                                                           Training images
% -------------------------------------------------------------------------% 
names = cell(1,numel(traindata));
labels = zeros(numel(traindata),numel(cats));


% load image names
for t=1:numel(traindata)
  names{t} = sprintf('%06d.jpg',traindata(t));
%   data{t} = imread(sprintf('%s/%s',imdb.imageDir,names{t}));
end

% load binary labels
for c=1:numel(cats)
  t = importdata(fullfile(opts.dataDir,'VOCdevkit','VOC2007','ImageSets','Main',[cats{c},'_train.txt']));
  labels(:,c) = t(:,2);
end

imdb.images.id = traindata';
imdb.images.name = names ;
imdb.images.set = ones(1, numel(names)) ;
imdb.images.label = labels' ;
% imdb.images.data = data;

% -------------------------------------------------------------------------
%                                                         Validation images
% -------------------------------------------------------------------------

names = cell(1,numel(valdata));
labels = zeros(numel(valdata),numel(cats));
% data = cell(1,numel(valdata));

% load image names
for t=1:numel(valdata)
  names{t} = sprintf('%06d.jpg',valdata(t));
%   data{t} = imread(sprintf('%s/%s',imdb.imageDir,names{t}));
end

% load binary labels
for c=1:numel(cats)
  t = importdata(fullfile(opts.dataDir,'VOCdevkit','VOC2007','ImageSets','Main',[cats{c},'_val.txt']));
  labels(:,c) = t(:,2);
end


imdb.images.id = horzcat(imdb.images.id, valdata') ;
imdb.images.name = horzcat(imdb.images.name, names) ;
imdb.images.set = horzcat(imdb.images.set, 2*ones(1,numel(names))) ;
imdb.images.label = horzcat(imdb.images.label, labels') ;
% imdb.images.data = horzcat(imdb.images.data, data) ;

% % -------------------------------------------------------------------------
% %                                                               Test images
% % -------------------------------------------------------------------------
% 
%
if opts.loadTest
  names = cell(1,numel(testdata));
  labels = zeros(numel(testdata),numel(cats));
  % data = cell(1,numel(testdata));

  % load image names
  for t=1:numel(testdata)
    names{t} = sprintf('%06d.jpg',testdata(t));
  %   data{t} = imread(sprintf('%s/%s',imdb.imageDir,names{t}));
  end

  % load binary labels
  for c=1:numel(cats)
    t = importdata(fullfile(opts.dataDir,'VOCdevkit','VOC2007','ImageSets','Main',[cats{c},'_test.txt']));
    labels(:,c) = t(:,2);
  end

  imdb.images.id = horzcat(imdb.images.id, testdata') ;
  imdb.images.name = horzcat(imdb.images.name, names) ;
  imdb.images.set = horzcat(imdb.images.set, 3 * ones(1,numel(names))) ;
  imdb.images.label = horzcat(imdb.images.label, labels') ;
  % imdb.images.data = horzcat(imdb.images.data, data) ;
end
% -------------------------------------------------------------------------
%                                                            Postprocessing
% -------------------------------------------------------------------------
[~,sorti] = sort(imdb.images.id);


imdb.images.id = imdb.images.id(sorti);
imdb.images.name = imdb.images.name(sorti) ;
imdb.images.set = imdb.images.set(sorti) ;
imdb.images.label = single(imdb.images.label(:,sorti)) ;
imdb.images.size = zeros(numel(imdb.images.name),2);

if ~isempty(opts.proposalDir)
  imdb.images.boxes = ssw.boxes;
  assert(all(ssw.id==imdb.images.id));
end

% this is zero as scores of selective search windows are not much
% informative
if ~isempty(opts.proposalDir)
imdb.images.boxScores = cell(size(imdb.images.boxes));
for i=1:numel(imdb.images.boxes)
  imdb.images.boxes{i} = int16(imdb.images.boxes{i});
  imdb.images.boxScores{i} = zeros(size(imdb.images.boxes{i},1),1,'single');
  imf = imfinfo(fullfile(imdb.imageDir,imdb.images.name{i}));
  imdb.images.size(i,:) = [imf.Height,imf.Width];
end
end
end


================================================
FILE: pascal/wsddnVOCap.m
================================================
function ap = wsddnVOCap(rec,prec)
% From the PASCAL VOC 2011 devkit

mrec=[0 ; rec ; 1];
mpre=[0 ; prec ; 0];
for i=numel(mpre)-1:-1:1
    mpre(i)=max(mpre(i),mpre(i+1));
end
i=find(mrec(2:end)~=mrec(1:end-1))+1;
ap=sum((mrec(i)-mrec(i-1)).*mpre(i));


================================================
FILE: pascal/wsddnVOCevaldet.m
================================================
function [rec,prec,ap] = wsddnVOCevaldet(VOCopts,cls,res,draw)

% load test set
tic;
VOCopts.annocachepath=[VOCopts.localdir '%s_anno_cache.mat'];
cp=sprintf(VOCopts.annocachepath,VOCopts.testset);
if exist(cp,'file')
  fprintf('%s: pr: loading ground truth\n',cls);
  load(cp,'gtids','recs');
else
  [gtids,t]=textread(sprintf(VOCopts.imgsetpath,VOCopts.testset),'%s %d');
  for i=1:length(gtids)
    % display progress
    if toc>1
      fprintf('%s: pr: load: %d/%d\n',cls,i,length(gtids));
      drawnow;
      tic;
    end
    
    % read annotation
    recs(i)=PASreadrecord(sprintf(VOCopts.annopath,gtids{i}));
  end
  save(cp,'gtids','recs');
end

fprintf('%s: pr: evaluating detections\n',cls);

% hash image ids
hash=wsddnVOChash_init(gtids);

% extract ground truth objects

npos=0;
gt(length(gtids))=struct('BB',[],'diff',[],'det',[]);
for i=1:length(gtids)
  % extract objects of class
  clsinds=strmatch(cls,{recs(i).objects(:).class},'exact');
  gt(i).BB=cat(1,recs(i).objects(clsinds).bbox)';
  gt(i).diff=[recs(i).objects(clsinds).difficult];
  gt(i).det=false(length(clsinds),1);
  npos=npos+sum(~gt(i).diff);
end

% load results
ids        = res.ids;
confidence = res.confidence;
BB         = res.bbox';

% sort detections by decreasing confidence
[sc,si]=sort(-confidence);
ids=ids(si);
BB=BB(:,si);

% assign detections to ground truth objects
nd=length(confidence);
tp=zeros(nd,1);
fp=zeros(nd,1);
tic;
for d=1:nd
  % display progress
  if toc>1
    fprintf('%s: pr: compute: %d/%d\n',cls,d,nd);
    drawnow;
    tic;
  end
  
  % find ground truth image
  i=wsddnVOChash_lookup(hash,ids{d});
  if isempty(i)
    error('unrecognized image "%s"',ids{d});
  elseif length(i)>1
    error('multiple image "%s"',ids{d});
  end
  
  % assign detection to ground truth object if any
  bb=BB(:,d);
  ovmax=-inf;
  for j=1:size(gt(i).BB,2)
    bbgt=gt(i).BB(:,j);
    bi=[max(bb(1),bbgt(1)) ; max(bb(2),bbgt(2)) ; min(bb(3),bbgt(3)) ; min(bb(4),bbgt(4))];
    iw=bi(3)-bi(1)+1;
    ih=bi(4)-bi(2)+1;
    if iw>0 & ih>0
      % compute overlap as area of intersection / area of union
      ua=(bb(3)-bb(1)+1)*(bb(4)-bb(2)+1)+...
        (bbgt(3)-bbgt(1)+1)*(bbgt(4)-bbgt(2)+1)-...
        iw*ih;
      ov=iw*ih/ua;
      if ov>ovmax
        ovmax=ov;
        jmax=j;
      end
    end
  end
  % assign detection as true positive/don't care/false positive
  if ovmax>=VOCopts.minoverlap
    if ~gt(i).diff(jmax)
      if ~gt(i).det(jmax)
        tp(d)=1;            % true positive
        gt(i).det(jmax)=true;
      else
        fp(d)=1;            % false positive (multiple detection)
      end
    end
  else
    fp(d)=1;                    % false positive
  end
end

% compute precision/recall
fp=cumsum(fp);
tp=cumsum(tp);
rec=tp/npos;
prec=tp./(fp+tp);

ap=wsddnVOCap(rec,prec);

if draw
  % plot precision/recall
  plot(rec,prec,'-');
  grid;
  xlabel 'recall'
  ylabel 'precision'
  title(sprintf('class: %s, subset: %s, AP = %.3f',cls,VOCopts.testset,ap));
end


================================================
FILE: pascal/wsddnVOChash_init.m
================================================
function hash = wsddnVOChash_init(strs)
% From the PASCAL VOC 2011 devkit

hsize=4999;
hash.key=cell(hsize,1);
hash.val=cell(hsize,1);

for i=1:numel(strs)
    s=strs{i};
    h=mod(str2double(s([4 6:end])),hsize)+1;
    j=numel(hash.key{h})+1;
    hash.key{h}{j}=strs{i};
    hash.val{h}(j)=i;
end



================================================
FILE: pascal/wsddnVOChash_lookup.m
================================================
function ind = wsddnVOChash_lookup(hash,s)
% From the PASCAL VOC 2011 devkit

hsize=numel(hash.key);
h=mod(str2double(s([4 6:end])),hsize)+1;
ind=hash.val{h}(strmatch(s,hash.key{h},'exact'));


================================================
FILE: setup_WSDDN.m
================================================
function setup_WSDDN()
%SETUP_WSDDN Sets up WSDDN, by adding its folders to the Matlab path

root = fileparts(mfilename('fullpath')) ;
addpath(root, [root '/matlab'], [root '/pascal'], [root '/core']) ;
addpath([vl_rootnn '/examples/']) ;
addpath([vl_rootnn '/examples/imagenet/']) ;