SYMBOL INDEX (1176 symbols across 120 files)

FILE: src/main/java/com/lambdazen/bitsy/BitsyEdge.java
  class BitsyEdge (line 17) | public class BitsyEdge extends BitsyElement implements Edge, IEdge {
    method BitsyEdge (line 21) | public BitsyEdge(
    method BitsyEdge (line 40) | public BitsyEdge(EdgeBean bean, BitsyTransaction tx, BitsyState state) {
    method asJsonBean (line 52) | public EdgeBeanJson asJsonBean() {
    method vertices (line 57) | @Override
    method inVertex (line 70) | @Override
    method outVertex (line 77) | @Override
    method bothVertices (line 84) | @Override
    method inOrOutVertex (line 93) | private Vertex inOrOutVertex(Direction dir) {
    method getInVertexId (line 107) | public UUID getInVertexId() {
    method getOutVertexId (line 111) | public UUID getOutVertexId() {
    method getVertexId (line 115) | public UUID getVertexId(Direction dir) {
    method incrementVersion (line 125) | public void incrementVersion() {
    method remove (line 129) | public void remove() {
    method toString (line 133) | public String toString() {
    method properties (line 137) | @Override

FILE: src/main/java/com/lambdazen/bitsy/BitsyElement.java
  class BitsyElement (line 17) | public abstract class BitsyElement implements Element {
    type PropType (line 18) | public static enum PropType {
    method BitsyElement (line 32) | public BitsyElement(
    method id (line 43) | @Override
    method label (line 49) | @Override
    method graph (line 55) | @Override
    method getPropertyDict (line 60) | public Dictionary getPropertyDict() {
    method value (line 64) | @Override
    method keys (line 75) | @Override
    method removeProperty (line 86) | public <T> T removeProperty(String key) {
    method property (line 100) | @Override
    method property (line 133) | @Override
    method properties (line 144) | @Override
    method markForUpdate (line 161) | public void markForUpdate() {
    method remove (line 174) | @Override
    method getState (line 177) | public BitsyState getState() {
    method setState (line 181) | public void setState(BitsyState state) {
    method getVersion (line 185) | public int getVersion() {
    method getTransaction (line 189) | public ITransaction getTransaction() {
    method hashCode (line 194) | @Override
    method equals (line 199) | @Override

FILE: src/main/java/com/lambdazen/bitsy/BitsyErrorCodes.java
  type BitsyErrorCodes (line 3) | public enum BitsyErrorCodes {
    method toString (line 5) | public String toString() {
    method toString (line 11) | public String toString() {
    method toString (line 17) | public String toString() {
    method toString (line 23) | public String toString() {
    method toString (line 29) | public String toString() {
    method toString (line 35) | public String toString() {
    method toString (line 41) | public String toString() {
    method toString (line 47) | public String toString() {
    method toString (line 53) | public String toString() {
    method toString (line 59) | public String toString() {
    method toString (line 65) | public String toString() {
    method toString (line 71) | public String toString() {
    method toString (line 77) | public String toString() {
    method toString (line 83) | public String toString() {
    method toString (line 89) | public String toString() {
    method toString (line 95) | public String toString() {
    method toString (line 101) | public String toString() {
    method toString (line 107) | public String toString() {
    method toString (line 113) | public String toString() {
    method toString (line 119) | public String toString() {
    method toString (line 125) | public String toString() {
    method toString (line 131) | public String toString() {
    method toString (line 137) | public String toString() {
    method toString (line 143) | public String toString() {
    method toString (line 149) | public String toString() {
    method toString (line 155) | public String toString() {
    method toString (line 161) | public String toString() {
    method toString (line 167) | public String toString() {
    method toString (line 173) | public String toString() {
    method toString (line 179) | public String toString() {
    method toString (line 185) | public String toString() {
    method toString (line 191) | public String toString() {
    method toString (line 197) | public String toString() {
    method toString (line 203) | public String toString() {
    method toString (line 209) | public String toString() {
    method toString (line 214) | public String toString() {
    method toString (line 219) | public String toString() {
    method toString (line 225) | public String toString() {

FILE: src/main/java/com/lambdazen/bitsy/BitsyException.java
  class BitsyException (line 3) | public class BitsyException extends RuntimeException {
    method BitsyException (line 7) | public BitsyException(BitsyErrorCodes code) {
    method BitsyException (line 13) | public BitsyException(BitsyErrorCodes code, String s) {
    method BitsyException (line 19) | public BitsyException(BitsyErrorCodes code, String s, Throwable t) {
    method getErrorCode (line 25) | public BitsyErrorCodes getErrorCode() {

FILE: src/main/java/com/lambdazen/bitsy/BitsyFeatures.java
  class BitsyFeatures (line 6) | public class BitsyFeatures implements Features {
    method BitsyFeatures (line 15) | public BitsyFeatures(boolean isPersistent) {
    method graph (line 19) | @Override
    method edge (line 24) | @Override
    method vertex (line 29) | @Override
    method toString (line 34) | @Override
    class BitsyGraphFeatures (line 39) | public class BitsyGraphFeatures implements Features.GraphFeatures {
      method supportsComputer (line 42) | @Override
      method variables (line 47) | @Override
      method supportsPersistence (line 52) | @Override
      method supportsThreadedTransactions (line 61) | @Override
    class BitsyVariableFeatures (line 67) | public class BitsyVariableFeatures implements Features.VariableFeatures {
      method supportsVariables (line 68) | @Override
      method supportsBooleanValues (line 73) | @Override
      method supportsDoubleValues (line 78) | @Override
      method supportsFloatValues (line 83) | @Override
      method supportsIntegerValues (line 88) | @Override
      method supportsLongValues (line 93) | @Override
      method supportsMapValues (line 98) | @Override
      method supportsMixedListValues (line 103) | @Override
      method supportsByteValues (line 108) | @Override
      method supportsBooleanArrayValues (line 113) | @Override
      method supportsByteArrayValues (line 118) | @Override
      method supportsDoubleArrayValues (line 123) | @Override
      method supportsFloatArrayValues (line 128) | @Override
      method supportsIntegerArrayValues (line 133) | @Override
      method supportsLongArrayValues (line 138) | @Override
      method supportsSerializableValues (line 143) | @Override
      method supportsStringValues (line 148) | @Override
      method supportsUniformListValues (line 153) | @Override
      method supportsStringArrayValues (line 158) | @Override
    class BitsyVertexFeatures (line 164) | public class BitsyVertexFeatures implements Features.VertexFeatures {
      method properties (line 167) | @Override
      method supportsMetaProperties (line 172) | @Override
      method supportsMultiProperties (line 177) | @Override
      method supportsUserSuppliedIds (line 182) | @Override
      method supportsNumericIds (line 187) | @Override
      method supportsAnyIds (line 192) | @Override
    class BitsyEdgeFeatures (line 200) | public class BitsyEdgeFeatures implements Features.EdgeFeatures {
      method properties (line 203) | @Override
      method supportsUserSuppliedIds (line 208) | @Override
      method supportsNumericIds (line 213) | @Override
      method supportsAnyIds (line 218) | @Override
    class BitsyGraphPropertyFeatures (line 226) | public class BitsyGraphPropertyFeatures implements Features.VertexProp...
      method supportsCustomIds (line 227) | @Override
      method supportsUserSuppliedIds (line 232) | @Override
      method supportsAnyIds (line 237) | @Override
      method supportsNumericIds (line 242) | @Override
      method supportsStringIds (line 247) | @Override
      method supportsUuidIds (line 252) | @Override

FILE: src/main/java/com/lambdazen/bitsy/BitsyGraph.java
  class BitsyGraph (line 34) | @Graph.OptIn("com.lambdazen.bitsy.structure.BitsyGraphStructureTestSuite")
    method BitsyGraph (line 87) | protected BitsyGraph(char isThreaded, boolean allowFullGraphScans) {
    method BitsyGraph (line 92) | public BitsyGraph() {
    method BitsyGraph (line 96) | public BitsyGraph(boolean allowFullGraphScans) {
    method BitsyGraph (line 100) | public BitsyGraph(Path dbPath) {
    method BitsyGraph (line 111) | public BitsyGraph(Path dbPath, boolean allowFullGraphScans, long txLog...
    method BitsyGraph (line 123) | public BitsyGraph(
    method BitsyGraph (line 192) | public BitsyGraph(Configuration configuration) {
    method createIndices (line 214) | private void createIndices(Class elemType, String vertexIndices) {
    method open (line 228) | public static final BitsyGraph open(Configuration configuration) {
    method toString (line 232) | public String toString() {
    method isTransactionActive (line 241) | public boolean isTransactionActive() {
    method isPersistent (line 247) | public boolean isPersistent() {
    method isFullGraphScanAllowed (line 251) | public boolean isFullGraphScanAllowed() {
    method getDefaultIsolationLevel (line 255) | public BitsyIsolationLevel getDefaultIsolationLevel() {
    method setDefaultIsolationLevel (line 259) | public void setDefaultIsolationLevel(BitsyIsolationLevel level) {
    method getTxIsolationLevel (line 263) | public BitsyIsolationLevel getTxIsolationLevel() {
    method setTxIsolationLevel (line 267) | public void setTxIsolationLevel(BitsyIsolationLevel level) {
    method getReorgFactor (line 271) | public double getReorgFactor() {
    method setReorgFactor (line 283) | public void setReorgFactor(double factor) {
    method getMinLinesPerReorg (line 293) | public int getMinLinesPerReorg() {
    method setMinLinesPerReorg (line 305) | public void setMinLinesPerReorg(int minLinesPerReorg) {
    method getTxLogThreshold (line 315) | public long getTxLogThreshold() {
    method setTxLogThreshold (line 327) | public void setTxLogThreshold(long txLogThreshold) {
    method flushTxLog (line 338) | public void flushTxLog() {
    method backup (line 352) | public void backup(String pathToDir) {
    method backup (line 360) | public void backup(Path pathToDir) {
    method getTx (line 370) | protected BitsyTransaction getTx() {
    method tx (line 389) | @Override
    method compute (line 395) | @Override
    method compute (line 401) | @Override
    method io (line 407) | @Override
    method features (line 415) | @Override
    method configuration (line 421) | @Override
    method validateHomogenousIds (line 441) | private void validateHomogenousIds(final Object[] ids) {
    method addVertex (line 452) | @Override
    method vertices (line 498) | @Override
    method getVertex (line 528) | private Vertex getVertex(Object id) {
    method getEdge (line 557) | private Edge getEdge(Object id) {
    method edges (line 583) | public Iterator<Edge> edges(Object... edgeIds) {
    method shutdown (line 613) | public void shutdown() {
    method createKeyIndex (line 649) | public <T extends Element> void createKeyIndex(String key, Class<T> el...
    method dropKeyIndex (line 653) | public <T extends Element> void dropKeyIndex(String key, Class<T> elem...
    method getIndexedKeys (line 657) | public <T extends Element> Set<String> getIndexedKeys(Class<T> element...
    method verticesByIndex (line 661) | public Iterator<BitsyVertex> verticesByIndex(final String key, final O...
    method edgesByIndex (line 667) | public Iterator<BitsyEdge> edgesByIndex(final String key, final Object...
    method getStore (line 673) | public IGraphStore getStore() {
    method close (line 677) | @Override
    method variables (line 682) | @Override

FILE: src/main/java/com/lambdazen/bitsy/BitsyGraphMBean.java
  type BitsyGraphMBean (line 3) | public interface BitsyGraphMBean {
    method getReorgFactor (line 10) | public double getReorgFactor();
    method setReorgFactor (line 16) | public void setReorgFactor(double factor);
    method getMinLinesPerReorg (line 23) | public int getMinLinesPerReorg();
    method setMinLinesPerReorg (line 29) | public void setMinLinesPerReorg(int minLinesPerReorg);
    method getTxLogThreshold (line 36) | public long getTxLogThreshold();
    method setTxLogThreshold (line 43) | public void setTxLogThreshold(long txLogThreshold);
    method flushTxLog (line 46) | public void flushTxLog();
    method backup (line 52) | public void backup(String pathToDir);

FILE: src/main/java/com/lambdazen/bitsy/BitsyGraphSONModule.java
  class BitsyGraphSONModule (line 35) | public class BitsyGraphSONModule extends TinkerPopJacksonModule {
    method BitsyGraphSONModule (line 48) | private BitsyGraphSONModule() {
    method getInstance (line 59) | public static final BitsyGraphSONModule getInstance() {
    method getTypeDefinitions (line 63) | @Override
    method getTypeNamespace (line 68) | @Override
    class UUIDSerializer (line 73) | public static class UUIDSerializer extends StdSerializer<UUID> {
      method UUIDSerializer (line 75) | public UUIDSerializer() {
      method serialize (line 79) | @Override
      method serializeWithType (line 87) | @Override
    class UUIDDeserializer (line 103) | public static class UUIDDeserializer extends StdDeserializer<UUID> {
      method UUIDDeserializer (line 104) | public UUIDDeserializer() {
      method deserialize (line 108) | @Override

FILE: src/main/java/com/lambdazen/bitsy/BitsyIoRegistryV3d0.java
  class BitsyIoRegistryV3d0 (line 14) | public class BitsyIoRegistryV3d0 extends AbstractIoRegistry {
    method BitsyIoRegistryV3d0 (line 17) | private BitsyIoRegistryV3d0() {
    method instance (line 31) | public static BitsyIoRegistryV3d0 instance() {
    class UUIDGryoSerializer (line 35) | static final class UUIDGryoSerializer extends Serializer<UUID> {
      method write (line 36) | @Override
      method read (line 42) | @Override

FILE: src/main/java/com/lambdazen/bitsy/BitsyIsolationLevel.java
  type BitsyIsolationLevel (line 3) | public enum BitsyIsolationLevel {

FILE: src/main/java/com/lambdazen/bitsy/BitsyProperty.java
  class BitsyProperty (line 9) | public class BitsyProperty<T> implements Property<T> {
    method BitsyProperty (line 15) | public BitsyProperty(BitsyElement element, String key, T value) {
    method key (line 21) | @Override
    method value (line 26) | @Override
    method isPresent (line 35) | @Override
    method element (line 40) | @Override
    method remove (line 45) | @Override
    method hashCode (line 54) | @Override
    method equals (line 59) | @Override
    method toString (line 64) | public String toString() {

FILE: src/main/java/com/lambdazen/bitsy/BitsyRetryException.java
  class BitsyRetryException (line 3) | public class BitsyRetryException extends BitsyException {
    method BitsyRetryException (line 7) | public BitsyRetryException(BitsyErrorCodes code) {
    method BitsyRetryException (line 11) | public BitsyRetryException(BitsyErrorCodes code, String s) {
    method BitsyRetryException (line 15) | public BitsyRetryException(BitsyErrorCodes code, String s, Throwable t) {

FILE: src/main/java/com/lambdazen/bitsy/BitsyState.java
  type BitsyState (line 3) | public enum BitsyState {

FILE: src/main/java/com/lambdazen/bitsy/BitsyVertex.java
  class BitsyVertex (line 19) | public class BitsyVertex extends BitsyElement implements Vertex {
    method BitsyVertex (line 22) | public BitsyVertex(
    method BitsyVertex (line 27) | public BitsyVertex(VertexBean bean, BitsyTransaction tx, BitsyState st...
    method label (line 31) | @Override
    method edges (line 37) | @Override
    method asBean (line 42) | public VertexBean asBean() {
    method asBean (line 47) | public VertexBean asBean(IStringCanonicalizer canonicalizer) {
    method asJsonBean (line 55) | public VertexBeanJson asJsonBean() {
    method vertices (line 61) | @Override
    method incrementVersion (line 80) | public void incrementVersion() {
    method remove (line 85) | public void remove() {
    method addEdge (line 89) | @Override
    method toString (line 139) | public String toString() {
    method property (line 144) | @Override
    method property (line 154) | @Override
    method property (line 160) | @Override
    method properties (line 177) | @Override

FILE: src/main/java/com/lambdazen/bitsy/BitsyVertexProperty.java
  class BitsyVertexProperty (line 11) | public class BitsyVertexProperty<V> extends BitsyProperty<V> implements ...
    method BitsyVertexProperty (line 12) | public BitsyVertexProperty(final BitsyVertex vertex, final String key,...
    method keys (line 16) | @Override
    method property (line 21) | @Override
    method property (line 26) | @Override
    method element (line 31) | @Override
    method properties (line 36) | @Override
    method id (line 41) | @Override
    method toString (line 46) | public String toString() {

FILE: src/main/java/com/lambdazen/bitsy/ICommitChanges.java
  type ICommitChanges (line 5) | public interface ICommitChanges {
    method getVertexChanges (line 6) | public Collection<BitsyVertex> getVertexChanges();
    method getEdgeChanges (line 8) | public Collection<BitsyEdge> getEdgeChanges();

FILE: src/main/java/com/lambdazen/bitsy/IEdge.java
  type IEdge (line 3) | public interface IEdge {
    method getInVertexId (line 4) | public UUID getInVertexId();
    method getOutVertexId (line 6) | public UUID getOutVertexId();

FILE: src/main/java/com/lambdazen/bitsy/IGraphStore.java
  type IGraphStore (line 12) | public interface IGraphStore {
    method commit (line 13) | public void commit(ICommitChanges changes);
    method getVertex (line 16) | public VertexBean getVertex(UUID id);
    method getBitsyVertex (line 19) | public BitsyVertex getBitsyVertex(BitsyTransaction tx, UUID id);
    method getEdge (line 22) | public EdgeBean getEdge(UUID id);
    method getBitsyEdge (line 25) | public BitsyEdge getBitsyEdge(BitsyTransaction tx, UUID id);
    method getEdges (line 27) | public List<EdgeBean> getEdges(UUID vertexId, Direction dir, String[] ...
    method getAllVertices (line 29) | public Collection<VertexBean> getAllVertices();
    method getAllEdges (line 31) | public Collection<EdgeBean> getAllEdges();
    method createKeyIndex (line 33) | public <T extends Element> void createKeyIndex(String key, Class<T> el...
    method dropKeyIndex (line 35) | public <T extends Element> void dropKeyIndex(String key, Class<T> elem...
    method getIndexedKeys (line 37) | public <T extends Element> Set<String> getIndexedKeys(Class<T> element...
    method shutdown (line 39) | public void shutdown();
    method lookupVertices (line 41) | public Collection<VertexBean> lookupVertices(String key, Object value);
    method lookupEdges (line 43) | public Collection<EdgeBean> lookupEdges(String key, Object value);
    method allowFullGraphScans (line 45) | public boolean allowFullGraphScans();

FILE: src/main/java/com/lambdazen/bitsy/ITransaction.java
  type ITransaction (line 9) | public interface ITransaction extends Transaction {
    method save (line 10) | public void save(boolean commit);
    method validateForQuery (line 12) | public void validateForQuery(BitsyElement bitsyElement) throws BitsyEx...
    method getVertex (line 14) | public Vertex getVertex(UUID outVertexId) throws BitsyException;
    method getEdge (line 16) | public Edge getEdge(UUID id) throws BitsyException;
    method getEdges (line 18) | public Iterable<Edge> getEdges(BitsyVertex bitsyVertex, Direction dir,...
    method markForPropertyUpdate (line 20) | public void markForPropertyUpdate(BitsyElement bitsyElement) throws Bi...
    method addVertex (line 22) | public void addVertex(BitsyVertex vertex) throws BitsyException;
    method removeVertex (line 24) | public void removeVertex(BitsyVertex vertex) throws BitsyException;
    method addEdge (line 26) | public void addEdge(BitsyEdge edge) throws BitsyException;
    method removeEdge (line 28) | public void removeEdge(BitsyEdge edge) throws BitsyException;
    method getAllVertices (line 30) | public Iterator<Vertex> getAllVertices();
    method getAllEdges (line 32) | public Iterator<Edge> getAllEdges();
    method lookupVertices (line 34) | public Iterator<BitsyVertex> lookupVertices(String key, Object value);
    method lookupEdges (line 36) | public Iterator<BitsyEdge> lookupEdges(String key, Object value);
    method getIsolationLevel (line 38) | public BitsyIsolationLevel getIsolationLevel();
    method setIsolationLevel (line 40) | public void setIsolationLevel(BitsyIsolationLevel level);

FILE: src/main/java/com/lambdazen/bitsy/PortDatabase.java
  class PortDatabase (line 19) | public class PortDatabase {
    method PortDatabase (line 32) | public PortDatabase(String[] args) throws IOException {
    method portDatabase (line 101) | private void portDatabase() throws IOException {
    method getVersion (line 150) | private String getVersion(Path sourcePath) throws IOException {
    method getVersionFromPath (line 180) | public String getVersionFromPath(Path metaPath) throws IOException {
    method setError (line 218) | private void setError(String error) {
    method getError (line 222) | private String getError() {
    method printUsage (line 226) | private static void printUsage(String error) {
    method main (line 235) | public static void main(String[] args) {
    method toHex (line 252) | private static String toHex(int input) {
    type Converter (line 261) | public interface Converter {
      method convert (line 262) | public String convert(String line, int lineNo, String fileName);
    class V10ToV15Coverter (line 265) | public class V10ToV15Coverter implements Converter {
      method convert (line 268) | @Override
    class V15ToV10Coverter (line 289) | public class V15ToV10Coverter implements Converter {
      method convert (line 292) | @Override

FILE: src/main/java/com/lambdazen/bitsy/ThreadedBitsyGraph.java
  class ThreadedBitsyGraph (line 6) | public class ThreadedBitsyGraph extends BitsyGraph {
    method ThreadedBitsyGraph (line 10) | public ThreadedBitsyGraph(BitsyGraph g) {
    method toString (line 18) | public String toString() {
    method features (line 22) | @Override
    method getTx (line 27) | @Override
    method isTransactionActive (line 41) | @Override
    method getDefaultIsolationLevel (line 47) | public BitsyIsolationLevel getDefaultIsolationLevel() {
    method setDefaultIsolationLevel (line 51) | public void setDefaultIsolationLevel(BitsyIsolationLevel level) {
    method getTxIsolationLevel (line 55) | public BitsyIsolationLevel getTxIsolationLevel() {
    method setTxIsolationLevel (line 59) | public void setTxIsolationLevel(BitsyIsolationLevel level) {
    method shutdown (line 63) | @Override

FILE: src/main/java/com/lambdazen/bitsy/UUID.java
  class UUID (line 6) | public class UUID implements Comparable<UUID> {
    method UUID (line 16) | public UUID(long msb, long lsb) {
    method getMostSignificantBits (line 21) | @JsonIgnore
    method getLeastSignificantBits (line 26) | @JsonIgnore
    method toString (line 31) | public String toString() {
    method uuidRepr (line 35) | public String uuidRepr() {
    method fromString (line 39) | public static UUID fromString(String str) {
    method randomUUID (line 45) | public static UUID randomUUID() {
    method compareTo (line 51) | public int compareTo(UUID other) {
    method hashCode (line 65) | @Override
    method equals (line 72) | @Override
    method toString (line 89) | public static String toString(UUID obj) {

FILE: src/main/java/com/lambdazen/bitsy/UUIDGraphBinarySerializer.java
  class UUIDGraphBinarySerializer (line 10) | public class UUIDGraphBinarySerializer implements CustomTypeSerializer<U...
    method getTypeName (line 14) | @Override
    method getDataType (line 19) | @Override
    method read (line 24) | @Override
    method readValue (line 35) | @Override
    method write (line 61) | @Override
    method writeValue (line 69) | @Override

FILE: src/main/java/com/lambdazen/bitsy/ads/dict/Dictionary.java
  type Dictionary (line 9) | public interface Dictionary {
    method size (line 10) | public int size();
    method getProperty (line 12) | public Object getProperty(String key);
    method getPropertyKeys (line 14) | public String[] getPropertyKeys();
    method setProperty (line 16) | public Dictionary setProperty(String key, Object value);
    method removeProperty (line 18) | public Dictionary removeProperty(String key);
    method copyOf (line 20) | public Dictionary copyOf();
    method canonicalizeKeys (line 24) | public void canonicalizeKeys(IStringCanonicalizer canonicalizer);

FILE: src/main/java/com/lambdazen/bitsy/ads/dict/Dictionary1.java
  class Dictionary1 (line 4) | public class Dictionary1 extends PrimitiveDictionary implements Dictiona...
    method Dictionary1 (line 11) | public Dictionary1(String key, Object value) {
    method Dictionary1 (line 17) | public Dictionary1(Dictionary2 base) {
    method Dictionary1 (line 23) | public Dictionary1(Dictionary1 base) {
    method keys (line 28) | @Override
    method values (line 33) | @Override
    method copyOf (line 38) | @Override
    method contractThreshold (line 43) | protected int contractThreshold() {
    method contract (line 47) | protected Dictionary contract() {
    method expand (line 51) | protected Dictionary expand(String key, Object value) {
    method write (line 55) | protected void write(int index, String key, Object value) {

FILE: src/main/java/com/lambdazen/bitsy/ads/dict/Dictionary11.java
  class Dictionary11 (line 3) | public class Dictionary11 extends PrimitiveDictionary implements Diction...
    method Dictionary11 (line 40) | public Dictionary11(Dictionary8 base, String key, Object value) {
    method Dictionary11 (line 71) | public Dictionary11(Dictionary16 base) {
    method Dictionary11 (line 107) | public Dictionary11(Dictionary11 base) {
    method Dictionary11 (line 143) | public Dictionary11(String[] keys, Object[] values) {
    method keys (line 178) | @Override
    method values (line 183) | @Override
    method write (line 188) | @Override
    method expand (line 258) | @Override
    method contractThreshold (line 263) | @Override
    method contract (line 268) | @Override
    method copyOf (line 273) | @Override

FILE: src/main/java/com/lambdazen/bitsy/ads/dict/Dictionary16.java
  class Dictionary16 (line 5) | public class Dictionary16 extends PrimitiveDictionary implements Diction...
    method Dictionary16 (line 57) | public Dictionary16(Dictionary11 base, String key, Object value) {
    method Dictionary16 (line 97) | public Dictionary16(DictionaryMax base) {
    method Dictionary16 (line 151) | public Dictionary16(Dictionary16 base) {
    method Dictionary16 (line 205) | public Dictionary16(String[] keys, Object[] values) {
    method keys (line 255) | @Override
    method values (line 262) | @Override
    method write (line 270) | @Override
    method expand (line 375) | @Override
    method contractThreshold (line 380) | @Override
    method contract (line 385) | @Override
    method copyOf (line 390) | @Override

FILE: src/main/java/com/lambdazen/bitsy/ads/dict/Dictionary2.java
  class Dictionary2 (line 3) | public class Dictionary2 extends PrimitiveDictionary implements Dictiona...
    method Dictionary2 (line 13) | public Dictionary2(Dictionary1 base, String key, Object value) {
    method Dictionary2 (line 23) | public Dictionary2(Dictionary3 base) {
    method Dictionary2 (line 32) | public Dictionary2(Dictionary2 base) {
    method Dictionary2 (line 41) | public Dictionary2(String[] keys, Object[] values) {
    method keys (line 49) | @Override
    method values (line 54) | @Override
    method write (line 59) | @Override
    method expand (line 77) | @Override
    method contractThreshold (line 82) | @Override
    method contract (line 87) | @Override
    method copyOf (line 92) | @Override

FILE: src/main/java/com/lambdazen/bitsy/ads/dict/Dictionary3.java
  class Dictionary3 (line 3) | public class Dictionary3 extends PrimitiveDictionary implements Dictiona...
    method Dictionary3 (line 16) | public Dictionary3(Dictionary2 base, String key, Object value) {
    method Dictionary3 (line 29) | public Dictionary3(Dictionary4 base) {
    method Dictionary3 (line 41) | public Dictionary3(Dictionary3 base) {
    method Dictionary3 (line 53) | public Dictionary3(String[] keys, Object[] values) {
    method keys (line 64) | @Override
    method values (line 69) | @Override
    method write (line 74) | @Override
    method expand (line 97) | @Override
    method contractThreshold (line 102) | @Override
    method contract (line 107) | @Override
    method copyOf (line 112) | @Override

FILE: src/main/java/com/lambdazen/bitsy/ads/dict/Dictionary4.java
  class Dictionary4 (line 3) | public class Dictionary4 extends PrimitiveDictionary implements Dictiona...
    method Dictionary4 (line 19) | public Dictionary4(Dictionary3 base, String key, Object value) {
    method Dictionary4 (line 35) | public Dictionary4(Dictionary6 base) {
    method Dictionary4 (line 50) | public Dictionary4(Dictionary4 base) {
    method Dictionary4 (line 65) | public Dictionary4(String[] keys, Object[] values) {
    method keys (line 79) | @Override
    method values (line 84) | @Override
    method write (line 89) | @Override
    method expand (line 117) | @Override
    method contractThreshold (line 122) | @Override
    method contract (line 127) | @Override
    method copyOf (line 132) | @Override

FILE: src/main/java/com/lambdazen/bitsy/ads/dict/Dictionary6.java
  class Dictionary6 (line 3) | public class Dictionary6 extends PrimitiveDictionary implements Dictiona...
    method Dictionary6 (line 25) | public Dictionary6(Dictionary4 base, String key, Object value) {
    method Dictionary6 (line 44) | public Dictionary6(Dictionary8 base) {
    method Dictionary6 (line 65) | public Dictionary6(Dictionary6 base) {
    method Dictionary6 (line 86) | public Dictionary6(String[] keys, Object[] values) {
    method keys (line 106) | @Override
    method values (line 111) | @Override
    method write (line 116) | @Override
    method expand (line 154) | @Override
    method contractThreshold (line 159) | @Override
    method contract (line 164) | @Override
    method copyOf (line 169) | @Override

FILE: src/main/java/com/lambdazen/bitsy/ads/dict/Dictionary8.java
  class Dictionary8 (line 3) | public class Dictionary8 extends PrimitiveDictionary implements Dictiona...
    method Dictionary8 (line 31) | public Dictionary8(Dictionary6 base, String key, Object value) {
    method Dictionary8 (line 56) | public Dictionary8(Dictionary11 base) {
    method Dictionary8 (line 83) | public Dictionary8(Dictionary8 base) {
    method Dictionary8 (line 110) | public Dictionary8(String[] keys, Object[] values) {
    method keys (line 136) | @Override
    method values (line 141) | @Override
    method write (line 146) | @Override
    method expand (line 201) | @Override
    method contractThreshold (line 206) | @Override
    method contract (line 211) | @Override
    method copyOf (line 216) | @Override

FILE: src/main/java/com/lambdazen/bitsy/ads/dict/DictionaryFactory.java
  class DictionaryFactory (line 5) | public class DictionaryFactory {
    method fromMap (line 6) | public static Dictionary fromMap(Map<String, Object> properties) {

FILE: src/main/java/com/lambdazen/bitsy/ads/dict/DictionaryMax.java
  class DictionaryMax (line 5) | public class DictionaryMax extends PrimitiveDictionary implements Dictio...
    method DictionaryMax (line 11) | public DictionaryMax(Dictionary16 base, String key, Object value) {
    method DictionaryMax (line 21) | public DictionaryMax(DictionaryMax base) {
    method DictionaryMax (line 28) | public DictionaryMax(String[] keys, Object[] values) {
    method keys (line 35) | @Override
    method values (line 40) | @Override
    method write (line 45) | @Override
    method expand (line 51) | @Override
    method contractThreshold (line 65) | @Override
    method contract (line 70) | @Override
    method copyOf (line 85) | @Override

FILE: src/main/java/com/lambdazen/bitsy/ads/dict/PrimitiveDictionary.java
  class PrimitiveDictionary (line 6) | public abstract class PrimitiveDictionary implements Dictionary {
    method PrimitiveDictionary (line 7) | public PrimitiveDictionary() {
    method keys (line 11) | abstract String[] keys();
    method values (line 13) | abstract Object[] values();
    method write (line 15) | abstract void write(int index, String key, Object value);
    method expand (line 17) | abstract Dictionary expand(String key, Object value);
    method contractThreshold (line 19) | abstract int contractThreshold();
    method contract (line 21) | abstract Dictionary contract();
    method copyOf (line 23) | public abstract Dictionary copyOf();
    method size (line 25) | public int size() {
    method getPropertyKeys (line 38) | public String[] getPropertyKeys() {
    method getProperty (line 51) | @Override
    method setProperty (line 70) | @Override
    method canonicalizeKeys (line 106) | @Override
    method removeProperty (line 130) | @Override
    method lookupKey (line 168) | protected String lookupKey(String[] keys, int i) {
    method lookupValue (line 172) | protected Object lookupValue(Object[] values, int i) {
    method toString (line 176) | public String toString() {

FILE: src/main/java/com/lambdazen/bitsy/ads/set/ArraySet.java
  class ArraySet (line 11) | public class ArraySet<T> implements Set<T> {
    method ArraySet (line 15) | public ArraySet(Object[] elements) {
    method ArraySet (line 19) | protected ArraySet(Object[] elements, int size) {
    method size (line 28) | @Override
    method getElements (line 33) | @Override
    method removeElement (line 38) | @Override
    method addElement (line 65) | @Override

FILE: src/main/java/com/lambdazen/bitsy/ads/set/ClassifierGetter.java
  type ClassifierGetter (line 3) | public interface ClassifierGetter<C, T> {
    method getClassifier (line 4) | public C getClassifier(T obj);

FILE: src/main/java/com/lambdazen/bitsy/ads/set/CompactMultiSetMax.java
  class CompactMultiSetMax (line 16) | public class CompactMultiSetMax<C, T> {
    method CompactMultiSetMax (line 23) | public CompactMultiSetMax(int initSize, boolean safe) {
    method getOccupiedCells (line 29) | public int getOccupiedCells() {
    method add (line 33) | public CompactMultiSetMax<C, T> add(T obj, ClassifierGetter<C, T> c) {
    method addElementNoRehash (line 46) | protected void addElementNoRehash(int hashCode, T obj) {
    method rehash (line 60) | private CompactMultiSetMax<C, T> rehash(int newLength, ClassifierGette...
    method remove (line 73) | public CompactMultiSetMax<C, T> remove(T obj, ClassifierGetter<C, T> c) {
    method removeElementNoHash (line 86) | protected void removeElementNoHash(int hashCode, T obj) {
    method getSuperSetWithClassifier (line 106) | public Object[] getSuperSetWithClassifier(C key) {
    method getAllElements (line 116) | public Object[] getAllElements() {
    method sizeBiggerThan24 (line 138) | public boolean sizeBiggerThan24() {

FILE: src/main/java/com/lambdazen/bitsy/ads/set/CompactSet.java
  class CompactSet (line 3) | public class CompactSet {
    method size (line 4) | public static int size(Object set) {
    method getElements (line 14) | public static Object[] getElements(Object set) {
    method add (line 24) | public static <T> Object add(Object set, T elem) {
    method addSafe (line 38) | public static <T> Object addSafe(Object set, T elem) {
    method remove (line 47) | public static <T> Object remove(Object set, T elem) {

FILE: src/main/java/com/lambdazen/bitsy/ads/set/PrimitiveSet.java
  class PrimitiveSet (line 5) | public abstract class PrimitiveSet<T> implements Set<T> {
    method PrimitiveSet (line 6) | public PrimitiveSet() {
    method elements (line 10) | abstract Object[] elements();
    method write (line 12) | abstract void write(int index, T elem);
    method expand (line 14) | abstract Set<T> expand(T elem);
    method contractThreshold (line 16) | abstract int contractThreshold();
    method contract (line 18) | abstract Object contract();
    method size (line 20) | public int size() {
    method size (line 26) | private int size(Object[] elems) {
    method getElements (line 37) | public Object[] getElements() {
    method addElement (line 50) | public Set<T> addElement(T elem) {
    method removeElement (line 83) | @Override

FILE: src/main/java/com/lambdazen/bitsy/ads/set/Set.java
  type Set (line 4) | public interface Set<T> {
    method size (line 5) | public int size();
    method getElements (line 7) | public Object[] getElements();
    method removeElement (line 9) | public Object removeElement(T elem);
    method addElement (line 11) | public Set<T> addElement(T elem);

FILE: src/main/java/com/lambdazen/bitsy/ads/set/Set12.java
  class Set12 (line 3) | public class Set12<T> extends PrimitiveSet<T> implements Set<T> {
    method Set12 (line 6) | public Set12(Set8<T> oldSet, T elem) {
    method Set12 (line 18) | public Set12(Set24<T> oldSet) {
    method elements (line 33) | @Override
    method write (line 38) | protected void write(int index, T elem) {
    method expand (line 105) | @Override
    method contractThreshold (line 110) | @Override
    method contract (line 115) | @Override

FILE: src/main/java/com/lambdazen/bitsy/ads/set/Set2.java
  class Set2 (line 3) | public class Set2<T> extends PrimitiveSet<T> implements Set<T> {
    method Set2 (line 6) | public Set2(T elem0, T elem1) {
    method Set2 (line 11) | public Set2(Set3<T> oldBag) {
    method elements (line 16) | @Override
    method write (line 21) | protected void write(int index, T elem) {
    method expand (line 36) | @Override
    method contractThreshold (line 41) | @Override
    method contract (line 46) | @Override

FILE: src/main/java/com/lambdazen/bitsy/ads/set/Set24.java
  class Set24 (line 3) | public class Set24<T> extends PrimitiveSet<T> implements Set<T> {
    method Set24 (line 29) | public Set24(Set12<T> oldSet, T elem) {
    method Set24 (line 45) | public Set24(Object[] elements) {
    method lookup (line 72) | private T lookup(Object[] arr, int index) {
    method elements (line 76) | @Override
    method write (line 84) | protected void write(int index, T elem) {
    method expand (line 218) | @Override
    method contractThreshold (line 223) | @Override
    method contract (line 228) | @Override

FILE: src/main/java/com/lambdazen/bitsy/ads/set/Set3.java
  class Set3 (line 3) | public class Set3<T> extends PrimitiveSet<T> implements Set<T> {
    method Set3 (line 6) | public Set3(Set2<T> oldSet, T elem) {
    method Set3 (line 12) | public Set3(Set4<T> oldSet) {
    method elements (line 18) | @Override
    method write (line 23) | protected void write(int index, T elem) {
    method expand (line 42) | @Override
    method contractThreshold (line 47) | @Override
    method contract (line 52) | @Override

FILE: src/main/java/com/lambdazen/bitsy/ads/set/Set4.java
  class Set4 (line 3) | public class Set4<T> extends PrimitiveSet<T> implements Set<T> {
    method Set4 (line 6) | public Set4(Set3<T> oldSet, T elem) {
    method Set4 (line 13) | public Set4(Set6<T> oldSet) {
    method elements (line 20) | @Override
    method write (line 25) | protected void write(int index, T elem) {
    method expand (line 48) | @Override
    method contractThreshold (line 53) | @Override
    method contract (line 58) | @Override

FILE: src/main/java/com/lambdazen/bitsy/ads/set/Set6.java
  class Set6 (line 3) | public class Set6<T> extends PrimitiveSet<T> implements Set<T> {
    method Set6 (line 6) | public Set6(Set4<T> oldSet, T elem) {
    method Set6 (line 14) | public Set6(Set8<T> oldSet) {
    method elements (line 23) | @Override
    method write (line 28) | protected void write(int index, T elem) {
    method expand (line 59) | @Override
    method contractThreshold (line 64) | @Override
    method contract (line 69) | @Override

FILE: src/main/java/com/lambdazen/bitsy/ads/set/Set8.java
  class Set8 (line 3) | public class Set8<T> extends PrimitiveSet<T> implements Set<T> {
    method Set8 (line 6) | public Set8(Set6<T> oldSet, T elem) {
    method Set8 (line 16) | public Set8(Set12<T> oldSet) {
    method elements (line 27) | @Override
    method write (line 32) | protected void write(int index, T elem) {
    method expand (line 78) | @Override
    method contractThreshold (line 83) | @Override
    method contract (line 88) | @Override

FILE: src/main/java/com/lambdazen/bitsy/ads/set/SetMax.java
  class SetMax (line 3) | public class SetMax<T> implements Set<T> {
    method getClassifier (line 7) | @Override
    method SetMax (line 16) | public SetMax(Set24<T> oldSet, Object elem) {
    method size (line 35) | @Override
    method getElements (line 42) | @Override
    method removeElement (line 47) | @Override
    method addElement (line 66) | @Override

FILE: src/main/java/com/lambdazen/bitsy/gremlin/BitsyGraphStep.java
  class BitsyGraphStep (line 26) | public final class BitsyGraphStep<S, E extends Element> extends GraphSte...
    method BitsyGraphStep (line 30) | public BitsyGraphStep(final GraphStep<S, E> originalGraphStep) {
    method getBitsyGraph (line 41) | private BitsyGraph getBitsyGraph() {
    method vertices (line 51) | private Iterator<? extends Vertex> vertices() {
    method lookupVertices (line 55) | private Iterator<Vertex> lookupVertices(
    method edges (line 77) | private Iterator<? extends Edge> edges() {
    method lookupEdges (line 83) | private Iterator<Edge> lookupEdges(
    method toString (line 105) | @Override
    method getHasContainers (line 119) | @Override
    method addHasContainer (line 124) | @Override
    method hashCode (line 133) | @Override

FILE: src/main/java/com/lambdazen/bitsy/gremlin/BitsyTraversalStrategy.java
  class BitsyTraversalStrategy (line 15) | public class BitsyTraversalStrategy extends AbstractTraversalStrategy<Tr...
    method BitsyTraversalStrategy (line 20) | private BitsyTraversalStrategy() {}
    method apply (line 22) | @Override
    method instance (line 42) | public static BitsyTraversalStrategy instance() {

FILE: src/main/java/com/lambdazen/bitsy/index/BitsyIndex.java
  class BitsyIndex (line 11) | public abstract class BitsyIndex<T> {
    method BitsyIndex (line 14) | public BitsyIndex() {
    method getValue (line 18) | public abstract Object getValue(T bean);
    method copy (line 20) | public abstract T copy(T bean);
    method load (line 22) | public void load(Iterator<T> initialContents) {
    method get (line 29) | public List<T> get(Object value) {
    method add (line 49) | public void add(T bean) {
    method remove (line 65) | public void remove(T bean) {

FILE: src/main/java/com/lambdazen/bitsy/index/BitsyIndexMap.java
  class BitsyIndexMap (line 11) | public class BitsyIndexMap<BeanType, IndexType extends BitsyIndex<BeanTy...
    method BitsyIndexMap (line 15) | public BitsyIndexMap() {
    method get (line 21) | public Collection<BeanType> get(String key, Object value) {
    method add (line 36) | public void add(BeanType bean) {
    method remove (line 42) | public void remove(BeanType bean) {
    method addKeyIndex (line 53) | protected void addKeyIndex(String key, IndexType index) {
    method dropKeyIndex (line 61) | public void dropKeyIndex(String key) {
    method getIndexedKeys (line 65) | public Set<String> getIndexedKeys() {

FILE: src/main/java/com/lambdazen/bitsy/index/EdgeIndex.java
  class EdgeIndex (line 7) | public class EdgeIndex extends BitsyIndex<EdgeBean> {
    method EdgeIndex (line 10) | public EdgeIndex(String key, Iterator<EdgeBean> initialContents) {
    method getValue (line 18) | @Override
    method copy (line 24) | @Override

FILE: src/main/java/com/lambdazen/bitsy/index/EdgeIndexMap.java
  class EdgeIndexMap (line 6) | public class EdgeIndexMap extends BitsyIndexMap<EdgeBean, EdgeIndex> {
    method EdgeIndexMap (line 7) | public EdgeIndexMap() {
    method createKeyIndex (line 11) | public void createKeyIndex(String key, Iterator<EdgeBean> iter) {

FILE: src/main/java/com/lambdazen/bitsy/index/IndexHelper.java
  class IndexHelper (line 10) | public class IndexHelper {
    method filterElementsByKeyValue (line 11) | public static <T extends BitsyElement> Collection<T> filterElementsByK...
    method filterVertexBeansByKeyValue (line 30) | public static Collection<VertexBean> filterVertexBeansByKeyValue(
    method filterEdgeBeansByKeyValue (line 47) | public static Collection<EdgeBean> filterEdgeBeansByKeyValue(Collectio...

FILE: src/main/java/com/lambdazen/bitsy/index/VertexIndex.java
  class VertexIndex (line 7) | public class VertexIndex extends BitsyIndex<VertexBean> {
    method VertexIndex (line 10) | public VertexIndex(String key, Iterator<VertexBean> initialContents) {
    method getValue (line 18) | @Override
    method copy (line 24) | @Override

FILE: src/main/java/com/lambdazen/bitsy/index/VertexIndexMap.java
  class VertexIndexMap (line 6) | public class VertexIndexMap extends BitsyIndexMap<VertexBean, VertexInde...
    method VertexIndexMap (line 7) | public VertexIndexMap() {
    method createKeyIndex (line 11) | public void createKeyIndex(String key, Iterator<VertexBean> iter) {

FILE: src/main/java/com/lambdazen/bitsy/jsr223/BitsyGremlinPlugin.java
  class BitsyGremlinPlugin (line 17) | public class BitsyGremlinPlugin extends AbstractGremlinPlugin {
    method imports (line 20) | private static ImportCustomizer imports() {
    method BitsyGremlinPlugin (line 38) | public BitsyGremlinPlugin() {
    method instance (line 42) | public static BitsyGremlinPlugin instance() {

FILE: src/main/java/com/lambdazen/bitsy/store/AdjacencyMap.java
  class AdjacencyMap (line 16) | public class AdjacencyMap {
    method AdjacencyMap (line 21) | public AdjacencyMap(boolean isConcurrent, IEdgeRemover edgeRemover) {
    method clear (line 27) | public void clear() {
    method addEdge (line 32) | public void addEdge(UUID edgeId, UUID outVId, String label, UUID inVId...
    method addToTreeMap (line 38) | private void addToTreeMap(Map<UUID, TreeMap<Endpoint, Integer>> adjMap...
    method removeEdge (line 48) | public void removeEdge(UUID edgeId, UUID outVId, String label, UUID in...
    method removeVertex (line 59) | public void removeVertex(UUID vertexId) {
    method getEdges (line 70) | public List<UUID> getEdges(UUID vertexId, Direction dir, String[] edge...
    method removeMatchingKeys (line 100) | private boolean removeMatchingKeys(
    method findMatchingValues (line 174) | private void findMatchingValues(NavigableMap<Endpoint, Integer> map, E...

FILE: src/main/java/com/lambdazen/bitsy/store/AdjacencyMapForBeans.java
  class AdjacencyMapForBeans (line 14) | public class AdjacencyMapForBeans {
    method AdjacencyMapForBeans (line 18) | public AdjacencyMapForBeans(boolean isConcurrent, IEdgeRemover edgeRem...
    method addEdge (line 28) | public void addEdge(EdgeBean eBean) {
    method addEdgeToAdjList (line 37) | private Object addEdgeToAdjList(Object adjList, EdgeBean eBean) {
    method removeEdgeWithoutCallback (line 54) | protected void removeEdgeWithoutCallback(EdgeBean eBean) {
    method removeEdgeFromAdjList (line 69) | private Object removeEdgeFromAdjList(Object adjList, EdgeBean eBean) {
    method getEdgesFromAdjList (line 86) | private Object[] getEdgesFromAdjList(Object adjList) {
    method convertToSet (line 96) | private Object convertToSet(CompactMultiSetMax<String, EdgeBean> set) {
    method convertToMultiSet (line 102) | private Object convertToMultiSet(SetMax<EdgeBean> set) {
    method removeVertex (line 115) | public void removeVertex(VertexBean vBean) {
    method getEdges (line 145) | public List<EdgeBean> getEdges(VertexBean vBean, Direction dir, String...

FILE: src/main/java/com/lambdazen/bitsy/store/BackupJob.java
  class BackupJob (line 6) | public class BackupJob extends JobWithCountDownLatch implements IVeReorg...
    method BackupJob (line 10) | public BackupJob(Path backupDir) {
    method getBackupDir (line 14) | public Path getBackupDir() {
    method getException (line 18) | public BitsyException getException() {
    method setException (line 22) | public void setException(BitsyException bex) {

FILE: src/main/java/com/lambdazen/bitsy/store/CompactAndCopyTask.java
  class CompactAndCopyTask (line 16) | public class CompactAndCopyTask implements Runnable {
    method CompactAndCopyTask (line 29) | public CompactAndCopyTask(
    method run (line 43) | public void run() {
    method getOutputLines (line 226) | public int getOutputLines() {

FILE: src/main/java/com/lambdazen/bitsy/store/EdgeBean.java
  class EdgeBean (line 12) | @JsonPropertyOrder({"class", "id", "v", "s", "o", "l", "i", "p"})
    method EdgeBean (line 22) | public EdgeBean(
    method EdgeBean (line 34) | public EdgeBean(EdgeBean orig) {
    method getId (line 50) | @JsonIgnore
    method getIdStr (line 56) | @JsonProperty("id")
    method getProperties (line 61) | @JsonProperty("p")
    method getPropertiesDict (line 76) | @JsonIgnore
    method getVersion (line 81) | @JsonProperty("v")
    method getInVertexId (line 86) | @JsonIgnore
    method getOutVertexId (line 91) | @JsonIgnore
    method getLabel (line 96) | @JsonProperty("l")

FILE: src/main/java/com/lambdazen/bitsy/store/EdgeBeanJson.java
  class EdgeBeanJson (line 12) | public class EdgeBeanJson extends EdgeBean {
    method EdgeBeanJson (line 18) | @JsonCreator
    method EdgeBeanJson (line 37) | public EdgeBeanJson(
    method getInVertexId (line 52) | @JsonIgnore
    method getOutVertexId (line 58) | @JsonIgnore
    method getInVertexIdStr (line 64) | @JsonProperty("i")
    method getOutVertexIdStr (line 69) | @JsonProperty("o")
    method getState (line 74) | @JsonProperty("s")

FILE: src/main/java/com/lambdazen/bitsy/store/Endpoint.java
  class Endpoint (line 7) | public class Endpoint implements Serializable, Comparable<Endpoint> {
    method Endpoint (line 15) | public Endpoint(String edgeLabel, UUID edgeId) {
    method toString (line 21) | public String toString() {
    method setMarker (line 25) | public void setMarker() {
    method isMarker (line 29) | public boolean isMarker() {
    method getEdgeLabel (line 33) | public String getEdgeLabel() {
    method getEdgeId (line 37) | public UUID getEdgeId() {
    method compareTo (line 41) | public int compareTo(Endpoint other) {
    method equals (line 101) | public boolean equals(Object o) {
    method isMatch (line 114) | public boolean isMatch(Endpoint other) {

FILE: src/main/java/com/lambdazen/bitsy/store/FileBackedMemoryGraphStore.java
  class FileBackedMemoryGraphStore (line 53) | public class FileBackedMemoryGraphStore implements IGraphStore {
    method FileBackedMemoryGraphStore (line 108) | public FileBackedMemoryGraphStore(MemoryGraphStore memStore, Path dbPa...
    method FileBackedMemoryGraphStore (line 112) | public FileBackedMemoryGraphStore(
    method getTxLogFlushPotential (line 302) | public TxLogFlushPotential getTxLogFlushPotential() {
    method getVEReorgPotential (line 306) | public VEObsolescencePotential getVEReorgPotential() {
    method loadVersionAndIndexes (line 310) | private void loadVersionAndIndexes() {
    method saveVersionAndIndexes (line 347) | private void saveVersionAndIndexes() {
    method getOrderedTxLogs (line 389) | private CommittableFileLog[] getOrderedTxLogs(CommittableFileLog txLog...
    method getEarlierBuffer (line 401) | private CommittableFileLog getEarlierBuffer(CommittableFileLog log1, C...
    method toString (line 413) | public String toString() {
    method shutdown (line 417) | public void shutdown() {
    method openFileLog (line 435) | private CommittableFileLog openFileLog(String fileName, boolean isTxLo...
    method prepareForAppend (line 469) | private void prepareForAppend(CommittableFileLog cfl) {
    method getVertex (line 479) | @Override
    method getEdge (line 484) | @Override
    method getBitsyVertex (line 489) | @Override
    method getBitsyEdge (line 494) | @Override
    method getEdges (line 499) | @Override
    method commit (line 504) | @Override
    method flushTxLog (line 588) | public void flushTxLog() {
    method backup (line 621) | public void backup(Path backupDir) {
    class FlushNowJob (line 665) | public class FlushNowJob implements ITxBatchJob {}
    class TxUnitFlusher (line 668) | public class TxUnitFlusher implements BufferFlusher<TxUnit> {
      method flushBuffer (line 669) | @Override
    class TxBatchQueuer (line 678) | public class TxBatchQueuer implements BufferQueuer<ITxBatchJob> {
      method onQueue (line 679) | @Override
    class TxBatchFlusher (line 725) | public class TxBatchFlusher implements BufferFlusher<ITxBatchJob> {
      method flushBuffer (line 726) | @Override
    class TxLogQueuer (line 742) | public class TxLogQueuer implements BufferQueuer<IVeReorgJob> {
      method onQueue (line 743) | @Override
    class TxLogFlusher (line 835) | public class TxLogFlusher implements BufferFlusher<IVeReorgJob> {
      method flushBuffer (line 836) | @Override
    method getAllVertices (line 882) | @Override
    method getAllEdges (line 887) | @Override
    method createKeyIndex (line 892) | @Override
    method dropKeyIndex (line 902) | @Override
    method getIndexedKeys (line 912) | @Override
    method lookupVertices (line 917) | @Override
    method lookupEdges (line 922) | @Override
    method allowFullGraphScans (line 927) | @Override

FILE: src/main/java/com/lambdazen/bitsy/store/IEdgeRemover.java
  type IEdgeRemover (line 6) | public interface IEdgeRemover {
    method removeEdge (line 7) | public IEdge removeEdge(UUID id);

FILE: src/main/java/com/lambdazen/bitsy/store/IStringCanonicalizer.java
  type IStringCanonicalizer (line 3) | public interface IStringCanonicalizer {
    method canonicalize (line 4) | public String canonicalize(String str);

FILE: src/main/java/com/lambdazen/bitsy/store/ITxBatchJob.java
  type ITxBatchJob (line 3) | public interface ITxBatchJob {}

FILE: src/main/java/com/lambdazen/bitsy/store/IVeReorgJob.java
  type IVeReorgJob (line 3) | public interface IVeReorgJob {}

FILE: src/main/java/com/lambdazen/bitsy/store/IndexBean.java
  class IndexBean (line 12) | @JsonPropertyOrder({"type", "key"})
    method IndexBean (line 17) | @JsonCreator
    method getType (line 23) | @JsonProperty("type")
    method getKey (line 28) | @JsonProperty("key")
    method getIndexClass (line 33) | @JsonIgnore

FILE: src/main/java/com/lambdazen/bitsy/store/JobWithCountDownLatch.java
  class JobWithCountDownLatch (line 5) | public class JobWithCountDownLatch {
    method JobWithCountDownLatch (line 8) | public JobWithCountDownLatch() {
    method getCountDownLatch (line 12) | public CountDownLatch getCountDownLatch() {

FILE: src/main/java/com/lambdazen/bitsy/store/LoadTask.java
  class LoadTask (line 19) | public class LoadTask implements Runnable {
    method LoadTask (line 33) | public LoadTask(
    method getTotalVE (line 49) | public long getTotalVE() {
    method run (line 53) | public void run() {

FILE: src/main/java/com/lambdazen/bitsy/store/MemoryGraphStore.java
  class MemoryGraphStore (line 33) | public class MemoryGraphStore implements IGraphStore {
    method MemoryGraphStore (line 54) | public MemoryGraphStore(boolean allowFullGraphScans) {
    method reset (line 62) | protected void reset() {
    method allowFullGraphScans (line 76) | @Override
    method commit (line 85) | public void commit(ICommitChanges changes) {
    method commit (line 91) | public void commit(ICommitChanges changes, boolean incrementVersions, ...
    method beginWrite (line 107) | private void beginWrite() {
    method endWrite (line 123) | private void endWrite() {
    method beginRead (line 139) | private void beginRead(RetryDetails retryDetails, boolean degradeToRea...
    method endRead (line 166) | private void endRead(RetryDetails retryDetails) {
    method shouldRetryRead (line 172) | private boolean shouldRetryRead(RetryDetails retryDetails) {
    method checkForConcurrentModifications (line 189) | private void checkForConcurrentModifications(ICommitChanges changes, b...
    method saveChanges (line 241) | protected long saveChanges(ICommitChanges changes) {
    method saveChanges (line 247) | protected long saveChanges(ICommitChanges changes, IStringCanonicalize...
    method saveEdge (line 263) | protected long saveEdge(long addedVE, BitsyEdge edge, IStringCanonical...
    method saveVertex (line 309) | protected long saveVertex(long addedVE, BitsyVertex vertex, IStringCan...
    method getVertex (line 343) | public VertexBean getVertex(UUID id) {
    method getEdge (line 349) | public EdgeBean getEdge(UUID id) {
    method getBitsyVertex (line 355) | @Override
    method getBitsyEdge (line 376) | @Override
    method getEdges (line 398) | public List<EdgeBean> getEdges(UUID vertexId, Direction dir, String[] ...
    method getAllVertices (line 416) | @Override
    method getAllEdges (line 426) | @Override
    method createKeyIndex (line 431) | @Override
    method dropKeyIndex (line 451) | @Override
    method getIndexedKeys (line 471) | @Override
    method lookupVertices (line 492) | @Override
    method lookupEdges (line 509) | @Override
    method shutdown (line 526) | @Override
    method asBean (line 532) | public EdgeBean asBean(BitsyEdge edge) {
    method asBean (line 552) | public EdgeBean asBean(BitsyEdge edge, IStringCanonicalizer canonicali...
    class RetryDetails (line 568) | public class RetryDetails {
      method RetryDetails (line 573) | public RetryDetails() {

FILE: src/main/java/com/lambdazen/bitsy/store/ParallelRecordReader.java
  class ParallelRecordReader (line 18) | public class ParallelRecordReader extends RecordReader {
    method ParallelRecordReader (line 36) | public ParallelRecordReader(
    method next (line 59) | public Record next() throws Exception {
    method shutdownServices (line 95) | private void shutdownServices() {
    class Batch (line 107) | public class Batch {
      method Batch (line 114) | public Batch() {
      method isLastBatch (line 138) | public boolean isLastBatch() {
      method deserialize (line 142) | public void deserialize() throws JsonProcessingException, IOException {
      method getRecords (line 159) | public List<Record> getRecords() throws InterruptedException {
      method setException (line 166) | public void setException(Exception e) {
      method getException (line 170) | public Exception getException() {
    class ProducerTask (line 175) | public class ProducerTask implements Runnable {
      method run (line 176) | public void run() {

FILE: src/main/java/com/lambdazen/bitsy/store/Record.java
  class Record (line 21) | public class Record {
    type RecordType (line 27) | public static enum RecordType {
    method hashCode (line 51) | public static int hashCode(String str) {
    method Record (line 60) | public Record(RecordType type, String json) {
    method deserialize (line 65) | public void deserialize(ObjectReader vReader, ObjectReader eReader) th...
    method getType (line 77) | public RecordType getType() {
    method getJson (line 81) | public String getJson() {
    method generateVertexLine (line 86) | public static void generateVertexLine(StringWriter sw, ObjectMapper ma...
    method generateEdgeLine (line 103) | public static void generateEdgeLine(StringWriter sw, ObjectMapper mapp...
    method generateDBLine (line 119) | public static String generateDBLine(RecordType type, String line) {
    method parseRecord (line 126) | public static Record parseRecord(String dbLine, int lineNo, String fil...
    method typeFromChar (line 153) | private static RecordType typeFromChar(char recChar) {
    method toHex (line 164) | private static String toHex(int input) {
    method checkObsolete (line 174) | public boolean checkObsolete(IGraphStore store, boolean isReorg, int l...
    method getVertex (line 266) | public BitsyVertex getVertex() {
    method getEdge (line 270) | public BitsyEdge getEdge() {

FILE: src/main/java/com/lambdazen/bitsy/store/RecordReader.java
  class RecordReader (line 6) | public class RecordReader {
    method RecordReader (line 14) | public RecordReader(CommittableFileLog cfl, ObjectReader vReader, Obje...
    method next (line 21) | public Record next() throws Exception {

FILE: src/main/java/com/lambdazen/bitsy/store/SingleThreadedStringCanonicalizer.java
  class SingleThreadedStringCanonicalizer (line 7) | public class SingleThreadedStringCanonicalizer implements IStringCanonic...
    method SingleThreadedStringCanonicalizer (line 10) | public SingleThreadedStringCanonicalizer() {
    method canonicalize (line 14) | public String canonicalize(String str) {

FILE: src/main/java/com/lambdazen/bitsy/store/TxBatch.java
  class TxBatch (line 9) | public class TxBatch implements ITxBatchJob {
    method TxBatch (line 13) | public TxBatch(List<TxUnit> trans) {
    method getTxUnitList (line 18) | public List<TxUnit> getTxUnitList() {
    method getSize (line 22) | public int getSize() {
    method setSize (line 26) | public void setSize(int size) {

FILE: src/main/java/com/lambdazen/bitsy/store/TxLog.java
  class TxLog (line 8) | public class TxLog implements IVeReorgJob {
    method TxLog (line 12) | public TxLog(CommittableFileLog cfl) {
    method getCommittableFileLog (line 17) | public CommittableFileLog getCommittableFileLog() {
    method setReorgPotDiff (line 21) | public void setReorgPotDiff(int rpd) {
    method getReorgPotDiff (line 25) | public int getReorgPotDiff() {

FILE: src/main/java/com/lambdazen/bitsy/store/TxLogFlushPotential.java
  class TxLogFlushPotential (line 13) | public class TxLogFlushPotential implements BufferPotential<ITxBatchJob> {
    method TxLogFlushPotential (line 19) | public TxLogFlushPotential(long txLogThreshold) {
    method getTxLogThreshold (line 24) | public long getTxLogThreshold() {
    method setTxLogThreshold (line 28) | public void setTxLogThreshold(long txLogThreshold) {
    method addWork (line 32) | @Override
    method reset (line 50) | @Override

FILE: src/main/java/com/lambdazen/bitsy/store/TxUnit.java
  class TxUnit (line 8) | public class TxUnit extends JobWithCountDownLatch {
    method TxUnit (line 14) | public TxUnit(ByteBuffer vertices, ByteBuffer edges, ByteBuffer tx) {
    method getByteBufferForV (line 20) | public ByteBuffer getByteBufferForV() {
    method getByteBufferForE (line 26) | public ByteBuffer getByteBufferForE() {
    method getByteBufferForT (line 32) | public ByteBuffer getByteBufferForT() {
    method writeToFile (line 38) | public int writeToFile(CommittableFileLog cfl) {
    method getException (line 52) | public BitsyException getException() {
    method setException (line 56) | public void setException(BitsyException bex) {

FILE: src/main/java/com/lambdazen/bitsy/store/VEObsolescencePotential.java
  class VEObsolescencePotential (line 7) | public class VEObsolescencePotential implements BufferPotential<IVeReorg...
    method VEObsolescencePotential (line 15) | public VEObsolescencePotential(int minLinesPerReorg, double factor, lo...
    method addWork (line 22) | @Override
    method reset (line 42) | @Override
    method setOrigLines (line 48) | public void setOrigLines(int origLines) {
    method getFactor (line 52) | public double getFactor() {
    method setFactor (line 56) | public void setFactor(double factor) {
    method getMinLinesPerReorg (line 60) | public int getMinLinesPerReorg() {
    method setMinLinesPerReorg (line 64) | public void setMinLinesPerReorg(int minLinesPerReorg) {

FILE: src/main/java/com/lambdazen/bitsy/store/VertexBean.java
  class VertexBean (line 10) | public class VertexBean extends UUID implements Serializable {
    method VertexBean (line 20) | public VertexBean(UUID uuid, String label, Dictionary properties, int ...
    method VertexBean (line 29) | public VertexBean(VertexBean orig) {
    method getId (line 39) | @JsonIgnore
    method getIdStr (line 45) | @JsonProperty("id")
    method getProperties (line 50) | @JsonProperty("p")
    method getPropertiesDict (line 65) | @JsonIgnore
    method getVersion (line 70) | @JsonProperty("v")
    method getLabel (line 75) | @JsonProperty("l")
    method copyFrom (line 80) | public void copyFrom(VertexBean vBean) {

FILE: src/main/java/com/lambdazen/bitsy/store/VertexBeanJson.java
  class VertexBeanJson (line 13) | @JsonPropertyOrder({"id", "v", "s", "p"})
    method VertexBeanJson (line 19) | @JsonCreator
    method VertexBeanJson (line 31) | public VertexBeanJson(UUID id, String label, Dictionary properties, in...
    method getState (line 37) | @JsonProperty("s")
    method getIdStr (line 42) | @JsonProperty("id")
    method getProperties (line 47) | @JsonProperty("p")

FILE: src/main/java/com/lambdazen/bitsy/tx/BitsyTransaction.java
  class BitsyTransaction (line 32) | public class BitsyTransaction implements ITransaction, ICommitChanges {
    method BitsyTransaction (line 41) | public BitsyTransaction(BitsyTransactionContext context, BitsyIsolatio...
    method createThreadedTx (line 47) | @Override
    method graph (line 56) | public BitsyGraph graph() {
    method open (line 60) | @Override
    method commit (line 75) | @Override
    method rollback (line 80) | @Override
    method close (line 85) | @Override
    method isOpen (line 91) | public boolean isOpen() {
    method isStopped (line 95) | public boolean isStopped() {
    method getIsolationLevel (line 99) | @Override
    method setIsolationLevel (line 104) | @Override
    method save (line 109) | public void save(boolean commit) {
    method checkIfActive (line 132) | public void checkIfActive() throws BitsyException {
    method validateForQuery (line 136) | public void validateForQuery(BitsyElement bitsyElement) throws BitsyEx...
    method isDeleted (line 145) | private boolean isDeleted(BitsyElement bitsyElement) {
    method getVertex (line 158) | public Vertex getVertex(UUID id) throws BitsyException {
    method getEdge (line 189) | public Edge getEdge(UUID id) throws BitsyException {
    method isDeletedVertex (line 228) | private boolean isDeletedVertex(UUID id) {
    method getEdges (line 234) | public Iterable<Edge> getEdges(BitsyVertex bitsyVertex, Direction dir,...
    method markForPropertyUpdate (line 305) | public void markForPropertyUpdate(BitsyElement bitsyElement) throws Bi...
    method addVertex (line 325) | public void addVertex(BitsyVertex vertex) throws BitsyException {
    method removeVertex (line 334) | public void removeVertex(BitsyVertex vertex) throws BitsyException {
    method addEdge (line 357) | public void addEdge(BitsyEdge edge) throws BitsyException {
    method removeEdge (line 377) | public void removeEdge(BitsyEdge edge) throws BitsyException {
    method getVertexChanges (line 400) | public Collection<BitsyVertex> getVertexChanges() {
    method getEdgeChanges (line 404) | public Collection<BitsyEdge> getEdgeChanges() {
    method getAllVertices (line 408) | @Override
    method getAllEdges (line 422) | @Override
    method lookupVertices (line 436) | @Override
    method lookupEdges (line 470) | @Override
    method readWrite (line 505) | @Override
    method onReadWrite (line 510) | @Override
    method onClose (line 516) | @Override
    method addTransactionListener (line 522) | @Override
    method removeTransactionListener (line 527) | @Override
    method clearTransactionListeners (line 532) | @Override
    method begin (line 538) | public <T extends TraversalSource> T begin(final Class<T> traversalSou...

FILE: src/main/java/com/lambdazen/bitsy/tx/BitsyTransactionContext.java
  class BitsyTransactionContext (line 22) | public class BitsyTransactionContext {
    method BitsyTransactionContext (line 36) | public BitsyTransactionContext(IGraphStore store) {
    method removeEdgeOnVertexDelete (line 53) | private IEdge removeEdgeOnVertexDelete(UUID edgeId) throws BitsyExcept...
    method addTransactionListener (line 63) | public void addTransactionListener(Consumer<Status> listener) {
    method removeTransactionListener (line 67) | public void removeTransactionListener(Consumer<Status> listener) {
    method clearTransactionListeners (line 71) | public void clearTransactionListeners() {
    method announceCommit (line 75) | public void announceCommit(BitsyTransaction t) {
    method announceRollback (line 79) | public void announceRollback(BitsyTransaction t) {
    method onReadWrite (line 83) | public void onReadWrite(Consumer<Transaction> consumer) {
    method onClose (line 88) | public void onClose(Consumer<Transaction> consumer) {
    method getReadWriteConsumer (line 92) | public Consumer<Transaction> getReadWriteConsumer() {
    method getCloseConsumer (line 96) | public Consumer<Transaction> getCloseConsumer() {
    method clear (line 100) | public void clear() {

FILE: src/main/java/com/lambdazen/bitsy/util/BitsyElementIterator.java
  class BitsyElementIterator (line 12) | public abstract class BitsyElementIterator<BeanType, ElementType extends...
    method BitsyElementIterator (line 19) | public BitsyElementIterator(Collection<BeanType> vertices, Iterator<El...
    method BitsyElementIterator (line 26) | public BitsyElementIterator(
    method getId (line 40) | public abstract UUID getId(BeanType bean);
    method getElement (line 42) | public abstract ElementType getElement(BeanType bean);
    method hasNext (line 44) | public boolean hasNext() {
    method next (line 86) | public ElementType next() {
    method remove (line 103) | public void remove() {

FILE: src/main/java/com/lambdazen/bitsy/util/BufferFlusher.java
  type BufferFlusher (line 8) | public interface BufferFlusher<T> {
    method flushBuffer (line 11) | public void flushBuffer(BufferName bufName, List<T> workList) throws B...

FILE: src/main/java/com/lambdazen/bitsy/util/BufferPotential.java
  type BufferPotential (line 10) | public interface BufferPotential<T> {
    method addWork (line 16) | public boolean addWork(T newWork);
    method reset (line 22) | public void reset();

FILE: src/main/java/com/lambdazen/bitsy/util/BufferQueuer.java
  type BufferQueuer (line 7) | public interface BufferQueuer<T> {
    method onQueue (line 10) | public void onQueue(BufferName bufName, T work) throws BitsyException;

FILE: src/main/java/com/lambdazen/bitsy/util/CommittableFileLog.java
  class CommittableFileLog (line 19) | public class CommittableFileLog {
    method CommittableFileLog (line 51) | public CommittableFileLog(Path filePath, boolean isTxLog) throws IOExc...
    method getCounter (line 57) | public Long getCounter() {
    method isTxLog (line 61) | public boolean isTxLog() {
    method getPath (line 65) | public Path getPath() {
    method resetReadBuffers (line 69) | public void resetReadBuffers() {
    method readLine (line 80) | public String readLine() {
    method mark (line 169) | public void mark() {
    method mark (line 173) | public void mark(int numBytesBehind) {
    method getMarkPosition (line 193) | public long getMarkPosition() {
    method truncateAtMark (line 197) | public void truncateAtMark() {
    method openForAppend (line 217) | public void openForAppend() {
    method openForOverwrite (line 242) | public void openForOverwrite(Long counter) {
    method exists (line 282) | public boolean exists() {
    method openForRead (line 286) | public void openForRead() {
    method append (line 343) | public void append(byte[] toWrite) throws BitsyException {
    method append (line 349) | public void append(ByteBuffer buf) throws BitsyException {
    method commit (line 362) | public void commit() throws BitsyException {
    method close (line 375) | public void close() {
    method toString (line 392) | public String toString() {
    method size (line 396) | public long size() {
    method setLockMode (line 408) | public static void setLockMode(boolean b) {

FILE: src/main/java/com/lambdazen/bitsy/util/DefaultCommitChanges.java
  class DefaultCommitChanges (line 11) | public class DefaultCommitChanges implements ICommitChanges {
    method DefaultCommitChanges (line 15) | public DefaultCommitChanges() {
    method getVertexChanges (line 20) | @Override
    method getEdgeChanges (line 25) | @Override
    method reset (line 30) | public void reset() {
    method changeVertex (line 36) | public void changeVertex(BitsyVertex vertex) throws BitsyException {
    method changeEdge (line 40) | public void changeEdge(BitsyEdge edge) throws BitsyException {

FILE: src/main/java/com/lambdazen/bitsy/util/DoubleBuffer.java
  class DoubleBuffer (line 14) | public class DoubleBuffer<T> {
    type BufferName (line 17) | public enum BufferName {
    method DoubleBuffer (line 39) | public DoubleBuffer(BufferPotential<T> initPot, BufferFlusher<T> flush...
    method DoubleBuffer (line 43) | public DoubleBuffer(
    method getPot (line 64) | public BufferPotential<T> getPot() {
    method stop (line 68) | public void stop(int joinTimeout) {
    method addWork (line 91) | public void addWork(final T work) throws BitsyException {
    method getBufferToFlush (line 111) | public BufferName getBufferToFlush() throws InterruptedException {
    method getWorkList (line 131) | public List<T> getWorkList(BufferName bufName) {
    method getEnqueueBuffer (line 136) | public BufferName getEnqueueBuffer() {
    method completedFlush (line 140) | public void completedFlush() {
    method setException (line 152) | public void setException(BitsyException bitsyException) {
    method getPotential (line 158) | public BufferPotential<T> getPotential() {

FILE: src/main/java/com/lambdazen/bitsy/util/DoubleBufferThread.java
  class DoubleBufferThread (line 11) | public class DoubleBufferThread<T> extends Thread {
    method DoubleBufferThread (line 19) | public DoubleBufferThread(String threadName, DoubleBuffer<T> buf, Buff...
    method safeStop (line 29) | public void safeStop() {
    method run (line 33) | public void run() {
    method doFlush (line 53) | public void doFlush() throws InterruptedException {

FILE: src/main/java/com/lambdazen/bitsy/util/DoubleBufferWithExecWork.java
  class DoubleBufferWithExecWork (line 5) | public class DoubleBufferWithExecWork<T> extends DoubleBuffer<T> {
    method DoubleBufferWithExecWork (line 8) | public DoubleBufferWithExecWork(
    method addAndExecuteWork (line 23) | public void addAndExecuteWork(final T work) throws BitsyException {

FILE: src/main/java/com/lambdazen/bitsy/util/EdgeIterator.java
  class EdgeIterator (line 10) | public class EdgeIterator extends BitsyElementIterator<EdgeBean, BitsyEd...
    method EdgeIterator (line 13) | public EdgeIterator(BitsyTransaction tx, Collection<BitsyEdge> txEdges...
    method EdgeIterator (line 19) | public EdgeIterator(
    method getId (line 29) | @Override
    method getElement (line 34) | @Override

FILE: src/main/java/com/lambdazen/bitsy/util/VertexIterator.java
  class VertexIterator (line 10) | public class VertexIterator extends BitsyElementIterator<VertexBean, Bit...
    method VertexIterator (line 13) | public VertexIterator(BitsyTransaction tx, Collection<BitsyVertex> txV...
    method VertexIterator (line 19) | public VertexIterator(
    method getId (line 29) | @Override
    method getElement (line 34) | @Override

FILE: src/main/java/com/lambdazen/bitsy/wrapper/BitsyAutoReloadingEdge.java
  class BitsyAutoReloadingEdge (line 14) | public class BitsyAutoReloadingEdge implements Edge {
    method BitsyAutoReloadingEdge (line 18) | public BitsyAutoReloadingEdge(BitsyGraph g, BitsyEdge e) {
    method getBaseEdge (line 23) | public Edge getBaseEdge() {
    method remove (line 31) | @Override
    method id (line 36) | @Override
    method label (line 42) | @Override
    method hashCode (line 47) | public int hashCode() {
    method equals (line 51) | public boolean equals(Object o) {
    method toString (line 55) | public String toString() {
    method graph (line 59) | @Override
    method property (line 64) | @Override
    method vertices (line 69) | @Override
    method properties (line 74) | @Override

FILE: src/main/java/com/lambdazen/bitsy/wrapper/BitsyAutoReloadingGraph.java
  class BitsyAutoReloadingGraph (line 14) | public class BitsyAutoReloadingGraph implements Graph {
    method BitsyAutoReloadingGraph (line 17) | public BitsyAutoReloadingGraph(BitsyGraph g) {
    method getBaseGraph (line 21) | public BitsyGraph getBaseGraph() {
    method toString (line 25) | public String toString() {
    method open (line 29) | public static final BitsyAutoReloadingGraph open(Configuration configu...
    method addVertex (line 33) | @Override
    method compute (line 40) | @Override
    method compute (line 45) | @Override
    method vertices (line 50) | @Override
    method edges (line 56) | @Override
    method tx (line 63) | @Override
    method close (line 68) | @Override
    method variables (line 73) | @Override
    method configuration (line 78) | @Override
    method features (line 83) | @Override
    class VertexIterator (line 88) | public static class VertexIterator implements Iterator<Vertex> {
      method VertexIterator (line 92) | public VertexIterator(BitsyGraph g, Iterator<Vertex> iter) {
      method hasNext (line 97) | @Override
      method next (line 102) | @Override
      method remove (line 107) | @Override
    class EdgeIterator (line 113) | public static class EdgeIterator implements Iterator<Edge> {
      method EdgeIterator (line 117) | public EdgeIterator(BitsyGraph g, Iterator<Edge> iter) {
      method hasNext (line 122) | @Override
      method next (line 127) | @Override
      method remove (line 132) | @Override

FILE: src/main/java/com/lambdazen/bitsy/wrapper/BitsyAutoReloadingVertex.java
  class BitsyAutoReloadingVertex (line 16) | public class BitsyAutoReloadingVertex implements Vertex {
    method BitsyAutoReloadingVertex (line 20) | public BitsyAutoReloadingVertex(BitsyGraph g, BitsyVertex v) {
    method getBaseVertex (line 25) | public Vertex getBaseVertex() {
    method id (line 33) | @Override
    method label (line 39) | @Override
    method hashCode (line 44) | public int hashCode() {
    method equals (line 48) | public boolean equals(Object o) {
    method toString (line 52) | public String toString() {
    method graph (line 56) | @Override
    method remove (line 61) | @Override
    method addEdge (line 66) | @Override
    method edges (line 71) | @Override
    method vertices (line 76) | @Override
    method property (line 81) | @Override
    method property (line 86) | @Override
    method property (line 91) | @Override
    method properties (line 96) | @Override

FILE: src/test/java/com/lambdazen/bitsy/BitsyGraphIT.java
  class BitsyGraphIT (line 32) | public class BitsyGraphIT extends FileBasedTestCase {
    method isPersistent (line 38) | public boolean isPersistent() {
    method setUp (line 42) | public void setUp() throws IOException {
    method doSetUp (line 48) | public void doSetUp(boolean delete) throws IOException {
    method deleteDirectory (line 58) | protected static void deleteDirectory(final File directory) {
    method deleteDirectory (line 62) | protected static void deleteDirectory(final File directory, boolean de...
    method tearDown (line 78) | public void tearDown() {
    method getVertex (line 87) | private Vertex getVertex(Graph graph, Object id) {
    method getEdge (line 96) | private Edge getEdge(Graph graph, Object id) {
    method addEdge (line 105) | private Edge addEdge(Graph graph, Vertex vOut, Vertex vIn, String labe...
    method removeEdge (line 109) | private void removeEdge(Graph graph, Edge edge) {
    method removeVertex (line 113) | private void removeVertex(Graph graph, Vertex vertex) {
    method testLoop (line 117) | public void testLoop() throws IOException {
    method testClique (line 384) | public void testClique() throws IOException {
    method testTypes (line 668) | public void testTypes() throws IOException {
    method testEdgeCases (line 873) | public void testEdgeCases() {
    method testMultiThreadedEdgeQueries (line 1052) | public void testMultiThreadedEdgeQueries() throws IOException {
    method setException (line 1232) | private void setException(Throwable t) {
    method getException (line 1236) | private Throwable getException() {
    method testMultiThreadedTreeCreation (line 1240) | public void testMultiThreadedTreeCreation() throws IOException {
    method checkIterCount (line 1445) | private void checkIterCount(Iterator iter, int expectedCount) {
    method testPersistence (line 1455) | public void testPersistence() throws Exception {
    method assertPair (line 1658) | private void assertPair(int a, int b, int c, int d) {
    method lineCount (line 1667) | private int lineCount(Path file) throws Exception {
    method testLargeFileSaveLoad (line 1684) | public void testLargeFileSaveLoad() throws Exception {
    method XtestMultiThreadedCommits (line 1768) | public void XtestMultiThreadedCommits() throws Exception {
    method XtestMultiThreadedReadsOnBipartiteGraph (line 1873) | public void XtestMultiThreadedReadsOnBipartiteGraph() throws Exception {
    method testConcurrentAccessForVersions (line 2089) | public void testConcurrentAccessForVersions() throws InterruptedExcept...
    method testLargeDegreePerformance (line 2157) | public void testLargeDegreePerformance() {

FILE: src/test/java/com/lambdazen/bitsy/BitsyMemGraphIT.java
  class BitsyMemGraphIT (line 9) | public class BitsyMemGraphIT extends BitsyGraphIT {
    method isPersistent (line 10) | public boolean isPersistent() {
    method setUp (line 14) | public void setUp() {
    method tearDown (line 19) | public void tearDown() {
    method testPersistence (line 28) | public void testPersistence() {
    method testObsolescence (line 32) | public void testObsolescence() {

FILE: src/test/java/com/lambdazen/bitsy/FileBasedTestCase.java
  class FileBasedTestCase (line 11) | public class FileBasedTestCase extends TestCase {
    method tempDir (line 12) | public Path tempDir(String dirName) throws IOException {
    method tempDir (line 16) | public Path tempDir(String dirName, boolean delete) throws IOException {
    method deleteDirectory (line 37) | protected static void deleteDirectory(final File directory, boolean de...
    method testDummy (line 53) | public void testDummy() throws IOException {

FILE: src/test/java/com/lambdazen/bitsy/RecoveryTest.java
  class RecoveryTest (line 11) | public class RecoveryTest extends FileBasedTestCase {
    method RecoveryTest (line 12) | public RecoveryTest() {}
    method testPartialTx (line 14) | public void testPartialTx() throws Exception {
    method checkIterCount (line 55) | private void checkIterCount(Iterator<?> iter, int expectedCount) {

FILE: src/test/java/com/lambdazen/bitsy/ads/dict/DictionaryTest.java
  class DictionaryTest (line 8) | public class DictionaryTest extends TestCase {
    method testBasicExpandContract (line 11) | public void testBasicExpandContract() {
    method testRandomExpandContract (line 163) | public void testRandomExpandContract() {
    method randomTestIter (line 168) | public void randomTestIter(int numIters, int numKeys) {
    method compareAgainstMap (line 203) | public void compareAgainstMap(Dictionary dict, Map<String, Object> ref...
    method getRandomObject (line 216) | public Object getRandomObject() {

FILE: src/test/java/com/lambdazen/bitsy/ads/set/CompactMultiSetMaxTest.java
  class CompactMultiSetMaxTest (line 6) | public class CompactMultiSetMaxTest extends TestCase {
    method CompactMultiSetMaxTest (line 7) | public CompactMultiSetMaxTest() {}
    method testSimpleUse (line 9) | public void testSimpleUse() {
    method testResize (line 57) | public void testResize() {

FILE: src/test/java/com/lambdazen/bitsy/ads/set/SetTest.java
  class SetTest (line 10) | public class SetTest extends TestCase {
    method testBasicExpandContract (line 13) | public void testBasicExpandContract() {
    method testRandomExpandContract (line 49) | public void testRandomExpandContract() {
    method testClassTypes (line 54) | public void testClassTypes() {
    method randomTestIter (line 173) | public void randomTestIter(int numIters, int numKeys) {
    method compareAgainstSet (line 205) | public void compareAgainstSet(Object set, java.util.Set<String> refere...
    method getRandomObject (line 219) | public Object getRandomObject() {

FILE: src/test/java/com/lambdazen/bitsy/store/EndpointTest.java
  class EndpointTest (line 6) | public class EndpointTest extends TestCase {
    method EndpointTest (line 7) | public EndpointTest() {}
    method testCompare (line 9) | public void testCompare() throws Exception {

FILE: src/test/java/com/lambdazen/bitsy/store/FileBackedMemoryGraphStoreTest.java
  class FileBackedMemoryGraphStoreTest (line 19) | public class FileBackedMemoryGraphStoreTest extends FileBasedTestCase {
    method FileBackedMemoryGraphStoreTest (line 22) | public FileBackedMemoryGraphStoreTest() {}
    method setUp (line 24) | protected void setUp() throws Exception {
    method tearDown (line 31) | protected void tearDown() throws Exception {
    method testSomething (line 40) | public void testSomething() {
    method testVertexInserts (line 49) | public void testVertexInserts() {
    method testBipartiteGraph (line 79) | public void testBipartiteGraph() {
    method createVertices (line 224) | private List<UUID> createVertices(int numPerCommit, int partSize) {
    method deleteVertices (line 238) | private void deleteVertices(UUID[] toDelete, int numPerCommit) {
    class VertexCommitChanges (line 248) | public class VertexCommitChanges implements ICommitChanges {
      method VertexCommitChanges (line 256) | public VertexCommitChanges(int start, int num) {
      method VertexCommitChanges (line 260) | public VertexCommitChanges(int start, int num, UUID[] toDelete) {
      method VertexCommitChanges (line 264) | public VertexCommitChanges(int start, int num, UUID[] toDelete, int ...
      method getVertexIDs (line 272) | public List<UUID> getVertexIDs() {
      method getVertexChanges (line 276) | @Override
      method getEdgeChanges (line 310) | @Override
    class EdgeCommitChanges (line 316) | public class EdgeCommitChanges implements ICommitChanges {
      method EdgeCommitChanges (line 323) | public EdgeCommitChanges() {
      method size (line 329) | public int size() {
      method addEdge (line 333) | public void addEdge(UUID outUUID, String label, UUID inUUID) {
      method getVertexChanges (line 339) | @Override
      method getEdgeChanges (line 344) | @Override

FILE: src/test/java/com/lambdazen/bitsy/store/MemoryGraphStoreTest.java
  class MemoryGraphStoreTest (line 19) | public class MemoryGraphStoreTest extends TestCase {
    method MemoryGraphStoreTest (line 22) | public MemoryGraphStoreTest() {}
    method setUp (line 24) | protected void setUp() {
    method tearDown (line 30) | protected void tearDown() {
    method testSomething (line 38) | public void testSomething() {
    method testVertexInserts (line 47) | public void testVertexInserts() {
    method testBipartiteGraph (line 77) | public void testBipartiteGraph() {
    method createVertices (line 227) | private List<UUID> createVertices(int numPerCommit, int partSize) {
    method deleteVertices (line 241) | private void deleteVertices(UUID[] toDelete, int numPerCommit) {
    class VertexCommitChanges (line 251) | public class VertexCommitChanges implements ICommitChanges {
      method VertexCommitChanges (line 259) | public VertexCommitChanges(int start, int num) {
      method VertexCommitChanges (line 263) | public VertexCommitChanges(int start, int num, UUID[] toDelete) {
      method VertexCommitChanges (line 267) | public VertexCommitChanges(int start, int num, UUID[] toDelete, int ...
      method getVertexIDs (line 275) | public List<UUID> getVertexIDs() {
      method getVertexChanges (line 279) | @Override
      method getEdgeChanges (line 314) | @Override
    class EdgeCommitChanges (line 320) | public class EdgeCommitChanges implements ICommitChanges {
      method EdgeCommitChanges (line 327) | public EdgeCommitChanges() {
      method size (line 333) | public int size() {
      method addEdge (line 337) | public void addEdge(UUID outUUID, String label, UUID inUUID) {
      method getVertexChanges (line 343) | @Override
      method getEdgeChanges (line 348) | @Override

FILE: src/test/java/com/lambdazen/bitsy/store/RecordTest.java
  class RecordTest (line 15) | public class RecordTest extends TestCase {
    method RecordTest (line 16) | public RecordTest() {}
    method testRecord (line 18) | public void testRecord() throws Exception {
    method testDictionaryMaxProperties (line 83) | public void testDictionaryMaxProperties() throws Exception {

FILE: src/test/java/com/lambdazen/bitsy/store/SingleThreadedStringCanonicalizerTest.java
  class SingleThreadedStringCanonicalizerTest (line 5) | public class SingleThreadedStringCanonicalizerTest extends TestCase {
    method testCanonicalize (line 6) | public void testCanonicalize() {

FILE: src/test/java/com/lambdazen/bitsy/structure/BitsyGraphStructureTestSuite.java
  class BitsyGraphStructureTestSuite (line 34) | @RunWith(BitsyGraphStructureTestSuite.class)
    method BitsyGraphStructureTestSuite (line 79) | public BitsyGraphStructureTestSuite(final Class<?> klass, final Runner...

FILE: src/test/java/com/lambdazen/bitsy/structure/BitsyProcessStandardTestSuite.java
  class BitsyProcessStandardTestSuite (line 64) | @RunWith(BitsyProcessStandardTestSuite.class)
    method BitsyProcessStandardTestSuite (line 227) | public BitsyProcessStandardTestSuite(final Class<?> klass, final Runne...

FILE: src/test/java/com/lambdazen/bitsy/structure/BitsyTestGraphProvider.java
  class BitsyTestGraphProvider (line 18) | public class BitsyTestGraphProvider extends AbstractGraphProvider {
    method clear (line 25) | @Override
    method getImplementations (line 39) | @Override
    method wipeOut (line 44) | private void wipeOut(File directory) {
    method deleteDirectory (line 48) | protected static void deleteDirectory(final File directory, boolean de...
    method getBaseConfiguration (line 68) | @Override

FILE: src/test/java/com/lambdazen/bitsy/structure/HasLabelTest.java
  class HasLabelTest (line 13) | public class HasLabelTest {
    method bitsyPredicateTest (line 14) | @Test

FILE: src/test/java/com/lambdazen/bitsy/util/CommittableFileLogTest.java
  class CommittableFileLogTest (line 14) | public class CommittableFileLogTest extends TestCase {
    method CommittableFileLogTest (line 15) | public CommittableFileLogTest() {}
    method testRead (line 17) | public void testRead() throws Exception {

FILE: src/test/java/com/lambdazen/bitsy/util/DoubleBufferIT.java
  class DoubleBufferIT (line 9) | public class DoubleBufferIT extends TestCase {
    method DoubleBufferIT (line 14) | public DoubleBufferIT() {}
    method testFixedCtBuf (line 16) | public void testFixedCtBuf() throws Exception {
    method testException (line 91) | public void testException() throws Exception {