[
  {
    "path": ".gitignore",
    "content": ".pdm.toml                               \n\n# tests\netc/AnnotSV/configfile.minAnnotation\netc/AnnotSV/application.properties.2007 \netc/AnnotSV/application.properties.1902\n\n# Annotations\nshare/AnnotSV/Annotations_Human/        \nshare/AnnotSV/Annotations_Mouse/\nshare/AnnotSV/Annotations_Exomiser/\n\n# Python reimplementation of AnnotSV\n# + PhenoGenius install\nshare/python3/annotsv/\nsrc/annotsv/\nPython/\nshare/python3/phenogeniuscli/\n\n# Exomiser:\n# File share/AnnotSV/jar/exomiser-rest-prioritiser-14.1.0.jar is 114.75 MB; this exceeds GitHub's file size limit of 100.00 MB\n# => Downloaded with the Makefile\nshare/AnnotSV/jar/exomiser-rest-prioritiser-14.1.0.jar\n\n# Unit tests\ntests/AnnotSV/privateTest_*\ntests/AnnotSV/test_*/command_Tcl.log\ntests/AnnotSV/test_*/output/\ntests/AnnotSV/ToDo\ntests/AnnotSV/check_all_public_test_directory.log\ntests/AnnotSV/test_11_RamTracking/ramAnnotSV-*-ram.txt\n\n# VariantConvert\nshare/python3/variantconvert/pipinstall.flag\nshare/python3/variantconvert/src/variantconvert/configs/GRCh37/annotsv3_from*local.json\nshare/python3/variantconvert/src/variantconvert/configs/GRCh38/annotsv3_from*local.json\nshare/python3/variantconvert/src/variantconvert/configs/CHM13/annotsv3_from*local.json\nshare/python3/variantconvert/src/variantconvert/__pycache__/\nshare/python3/variantconvert/src/variantconvert/__pycache__/*.pyc\nshare/python3/variantconvert/src/variantconvert/converters/__pycache__/\nshare/python3/variantconvert/src/variantconvert/converters/__pycache__/*.pyc\nshare/python3/variantconvert/src/variantconvert.egg-info/\n\n\n"
  },
  {
    "path": "License.txt",
    "content": "                    GNU GENERAL PUBLIC LICENSE\r\n                       Version 3, 29 June 2007\r\n\r\n Copyright (C) 2007 Free Software Foundation, Inc. <http://fsf.org/>\r\n Everyone is permitted to copy and distribute verbatim copies\r\n of this license document, but changing it is not allowed.\r\n\r\n                            Preamble\r\n\r\n  The GNU General Public License is a free, copyleft license for\r\nsoftware and other kinds of works.\r\n\r\n  The licenses for most software and other practical works are designed\r\nto take away your freedom to share and change the works.  By contrast,\r\nthe GNU General Public License is intended to guarantee your freedom to\r\nshare and change all versions of a program--to make sure it remains free\r\nsoftware for all its users.  We, the Free Software Foundation, use the\r\nGNU General Public License for most of our software; it applies also to\r\nany other work released this way by its authors.  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  },
  {
    "path": "Makefile",
    "content": "############################################################################################################\n# AnnotSV 3.5.8                                                                                            #\n#                                                                                                          #\n# AnnotSV: An integrated tool for Structural Variations annotation and ranking                             #\n#                                                                                                          #\n# Copyright (C) 2017-present Veronique Geoffroy (veronique.geoffroy@inserm.fr)                             #\n#                                                                                                          #\n# This is part of AnnotSV source code.                                                                     #\n#                                                                                                          #\n# This program is free software; you can redistribute it and/or                                            #\n# modify it under the terms of the GNU General Public License                                              #\n# as published by the Free Software Foundation; either version 3                                           #\n# of the License, or (at your option) any later version.                                                   #\n#                                                                                                          #\n# This program is distributed in the hope that it will be useful,                                          #\n# but WITHOUT ANY WARRANTY; without even the implied warranty of                                           #\n# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the                                             #\n# GNU General Public License for more details.                                                             #\n#                                                                                                          #\n# You should have received a copy of the GNU General Public License                                        #\n# along with this program; If not, see <http://www.gnu.org/licenses/>.                                     #\n############################################################################################################\n\nSHELL = /usr/bin/env bash\n\n\nDESTDIR              ?=\nPREFIX               ?= /usr/local\nINSTALLDIR1          := $(shell readlink -f \"$(DESTDIR)$(PREFIX)\")\nINSTALLDIR2          := $(shell readlink -f \"$(DESTDIR).\")\nBINDIR               := $(PREFIX)/bin\nETCDIR               := $(PREFIX)/etc\nSHAREDIR             := $(PREFIX)/share\nDOCDIR               := $(SHAREDIR)/doc\nBASHDIR              := $(SHAREDIR)/bash\nTESTSDIR             := $(PREFIX)/tests\nTCLVERSION           := tcl$(shell echo 'puts $${tcl_version};exit 0' | tclsh)\nTCLDIRDISTRIBUTED    := share/tcl\nTCLDIR               := $(SHAREDIR)/$(TCLVERSION)\nPYTHONDIR            := $(SHAREDIR)/python3\nANNOTSV              := AnnotSV\nJARDIR               := $(SHAREDIR)/$(ANNOTSV)/jar\nVERSION              := 3.5.8\nHUMANVERSION         := 3.5\nMOUSEVERSION         := 3.4.2\nRM                   := /bin/rm\nRMDIR                := /bin/rmdir\nMKDIR                := install -d\nMV                   := /bin/mv\nCP                   := install -p -m 0644\nCPDIR                := /bin/cp -r\nCHMOD                := /bin/chmod -R 777\nCONFIGFILE           := etc/$(ANNOTSV)/configfile\nMAKEFILE             := Makefile\nPROPERTIES           := etc/$(ANNOTSV)/application.properties\nBASH_SCRIPTS         := $(shell find share/bash/$(ANNOTSV)/ -name '*.bash' 2> /dev/null)\nDOCUMENTATIONS       := $(shell find License.txt changeLog.txt commandLineOptions.txt README.AnnotSV_*.pdf 2> /dev/null)\nVC_FLAG              := $(DESTDIR)$(PYTHONDIR)/variantconvert/pipinstall.flag\nVC_VERSION           := 2.0.1\nVC_CONFIGDIR         := $(DESTDIR)$(PYTHONDIR)/variantconvert/src/variantconvert/configs\nUSEANNODIR           := #flag whether separate annotation resources directory needed (e.g. for HPC environvment)\nEXRP_FILE            := #optional filepath for previously downloaded rest-prioritiser\n\n# make install\n.PHONY: install\n\nifeq ('$(INSTALLDIR1)' , '$(INSTALLDIR2)')\nall: install-display install-documentationlight install-variantconvert install-done\ninstall: install-display install-documentationlight install-variantconvert install-done\ninstall-exomiser: install-exomiser-1 install-exomiser-3\nelse\nall: install-display install-configfile install-makefile install-executable install-tcl-toolbox install-bash-toolbox install-doc install-others-doc install-variantconvert install-done\ninstall: install-display install-configfile install-makefile install-executable install-tcl-toolbox install-bash-toolbox install-doc install-others-doc install-variantconvert install-done\ninstall-exomiser: install-exomiser-1 install-exomiser-2 install-exomiser-3\nendif\n\n# For all PREFIX\ninstall-display:\n\t@echo \"\"\n\t@echo \"Installation of $(ANNOTSV)-$(VERSION):\"\n\t@echo \"----------------------------\"\n\t@echo DESTDIR=$(DESTDIR)\n\t@echo PREFIX=$(PREFIX)\n\t@echo TCLVERSION=$(TCLVERSION)\n\n# For PREFIX==.\ninstall-documentationlight: $(DOCUMENTATIONS)\n\t@echo \"\"\n\t@if [ -n \"$^\" ]; then \\\n\t    $(MV) $^ $(DESTDIR)$(DOCDIR)/$(ANNOTSV); \\\n\tfi\n\t@if [ -d \"$(TCLDIRDISTRIBUTED)\" ]; then \\\n\t\t$(MV) \"$(TCLDIRDISTRIBUTED)\" \"$(TCLDIR)\"; \\\n\tfi\n\n# For PREFIX!=.\ninstall-configfile: $(CONFIGFILE)\n\t@echo \"\"\n\t@echo \"Configfile configuration\"\n\t@echo \"------------------------\"\n\t$(MKDIR) $(DESTDIR)$(ETCDIR)/$(ANNOTSV)\n\tinstall -p -m 0755 $(CONFIGFILE)  $(DESTDIR)$(ETCDIR)/$(ANNOTSV)\n\n# For PREFIX!=.\ninstall-makefile: $(MAKEFILE)\n\t@echo \"\"\n\t@echo \"Makefile installation\"\n\t@echo \"---------------------\"\n\tinstall -p -m 0755 $(MAKEFILE)  $(DESTDIR)$(PREFIX)\n\n# For PREFIX!=.\ninstall-executable:\n\t@echo \"\"\n\t@echo \"Executable installation\"\n\t@echo \"-----------------------\"\n\t$(MKDIR) $(DESTDIR)$(BINDIR)\n\tinstall -p -m 0755 bin/AnnotSV $(DESTDIR)$(BINDIR)\n\n# For PREFIX!=.\ninstall-tcl-toolbox: \n\t@echo \"\"\n\t@echo \"Tcl scripts installation\"\n\t@echo \"------------------------\"\n\t$(MKDIR) $(DESTDIR)$(TCLDIR)/$(ANNOTSV)\n\tcd share/tcl ; tar cf - $(ANNOTSV) | tar xf - -C $(DESTDIR)$(TCLDIR)/\n\n# For all PREFIX\ninstall-variantconvert:\n\t@echo \"\"\n\t@echo \"variantconvert installation\"\n\t@echo \"---------------------------\"\n\t\n\t@if [ -d $(DESTDIR)$(PYTHONDIR)/variantconvert ]; then \\\n\t\techo \"variantconvert directory found; purging locally before re-installing.\"; \\\n\t\trm -rf $(DESTDIR)$(PYTHONDIR)/variantconvert/; \\\n\tfi\n\tgit clone --branch $(VC_VERSION) https://github.com/SamuelNicaise/variantconvert.git $(DESTDIR)$(PYTHONDIR)/variantconvert/\n\n\ttouch $(VC_FLAG)\n\tchmod 777 $(VC_FLAG)\n\tpip3 install -e $(DESTDIR)$(PYTHONDIR)/variantconvert/. > ./tmp.variantconvert.txt 2>&1 \\\n\t|| pip install -e $(DESTDIR)$(PYTHONDIR)/variantconvert/. >> ./tmp.variantconvert.txt 2>&1 \\\n\t|| python -m pip install -e $(DESTDIR)$(PYTHONDIR)/variantconvert/. >> ./tmp.variantconvert.txt 2>&1 \\\n\t|| rm -f $(VC_FLAG)\n\t@if [ -f $(VC_FLAG) ]; then \\\n\t\techo \"variantconvert installed\"; \\\n\t\t$(CHMOD) ./tmp.variantconvert.txt; \\\n\t\trm -f ./tmp.variantconvert.txt; \\\n\t\t$(CHMOD) $(VC_CONFIGDIR); \\\n\t\t$(MV) $(VC_CONFIGDIR)/hs1 $(VC_CONFIGDIR)/CHM13; \\\n\t\tfor f in $(VC_CONFIGDIR)/CHM13/annotsv*; do \\\n\t\t\tcase \"$$f\" in \\\n\t\t\t\t*.json) \\\n\t\t\t\t\tsed -i 's/\"##contig=<ID=chr/\"##contig=<ID=/g' \"$$f\" ;; \\\n\t\t\tesac; \\\n\t\tdone; \\\n\t\t# Creation of the \"*.local.json\" files for Conda use. \\\n\t\tfor genome in GRCh37 GRCh38 CHM13; do \\\n\t\t\tfor source in bed vcf; do \\\n\t\t\t\tfor type in combined full fullsplit; do \\\n\t\t\t\t\techo \"touch $(VC_CONFIGDIR)/$$genome/annotsv3_from_$$source.$$type.local.json\" ; \\\n\t\t\t\t\ttouch $(VC_CONFIGDIR)/$$genome/annotsv3_from_$$source.$$type.local.json; \\\n\t\t\t\t\t$(CHMOD) $(VC_CONFIGDIR)/$$genome/annotsv3_from_$$source.$$type.local.json; \\\n\t\t\t\tdone; \\\n\t\t\tdone; \\\n\t\tdone; \\\n\telse \\\n\t\techo \"variantconvert not installed\"; \\\n\tfi\n\n\n# For PREFIX!=.\ninstall-bash-toolbox: $(BASH_SCRIPTS)\n\t@echo \"\"\n\t@echo \"Bash scripts installation\"\n\t@echo \"-------------------------\"\n\t$(MKDIR) $(DESTDIR)$(BASHDIR)/$(ANNOTSV)\n\t$(CP) $^ $(DESTDIR)$(BASHDIR)/$(ANNOTSV)\n\n# For PREFIX!=.\ninstall-doc: $(DOCUMENTATIONS)\n\t@echo \"\"\n\t@echo \"Documentations installation\"\n\t@echo \"---------------------------\"\n\t$(MKDIR) $(DESTDIR)$(DOCDIR)/$(ANNOTSV)\n\t$(CP) $^ $(DESTDIR)$(DOCDIR)/$(ANNOTSV)\n\n# For PREFIX!=.\ninstall-others-doc: share/doc/$(ANNOTSV)/Example\n\t$(CPDIR) $^ $(DESTDIR)$(DOCDIR)/$(ANNOTSV)\n\n\n# For all PREFIX\ninstall-done: \n\t@echo \"\"\n\t@echo \"Done\"\n\t@echo \"\"\n\t@echo \"WARNING: Annotations need to be installed:\"\n\t@echo \"make DESTDIR=$(DESTDIR) PREFIX=$(PREFIX) install-human-annotation\"\n\t@echo \"make DESTDIR=$(DESTDIR) PREFIX=$(PREFIX) install-mouse-annotation\"\n\n\n\n# make install_organism_annotations\ninstall-all-annotations: install-human-annotation install-mouse-annotation                                     \n\ninstall-human-annotation: install-exomiser $(if $(USEANNODIR),,Annotations_Human_$(HUMANVERSION).tar.gz)\nifndef USEANNODIR\n\t@echo \"\"\n\t@echo \"Installation of human annotation:\"\n\t@echo \"\"\n\ttar -xf Annotations_Human_$(HUMANVERSION).tar.gz -C $(DESTDIR)$(SHAREDIR)/$(ANNOTSV)/\n\t$(RM) -rf Annotations_Human_$(HUMANVERSION).tar.gz\n\t$(CHMOD) $(DESTDIR)$(SHAREDIR)/$(ANNOTSV)/Annotations_*\n\t@echo \"\"\n\t@echo \"--> Human annotation installed\"\nelse\n\t@echo \"\"\n\t@echo \"Flag for custom annotationDir; skipping local install of human annotations\"\n\t@echo \"\"\nendif\n\n# For PREFIX==.\ninstall-exomiser-1: $(if $(USEANNODIR),,2406_phenotype.zip)\n\t@echo \"\"\n\t@echo \"Installation of Exomiser data:\"\n\t@echo \"\"\n\t\nifndef USEANNODIR\n\t$(MKDIR) -p $(DESTDIR)$(SHAREDIR)/$(ANNOTSV)/Annotations_Exomiser/2406\n\tunzip 2406_phenotype.zip -d $(DESTDIR)$(SHAREDIR)/$(ANNOTSV)/Annotations_Exomiser/2406/\n\t$(RM) -rf 2406_phenotype.zip\nelse\n\t@echo \"\"\n\t@echo \"Flag for custom annotationDir; skipped Exomiser phenotypes local installation\"\n\t@echo \"\"\nendif\n\t\n\t$(MKDIR) -p $(DESTDIR)$(JARDIR)\nifndef EXRP_FILE\n\tcurl -C - -LO https://github.com/exomiser/Exomiser/releases/download/14.1.0/exomiser-rest-prioritiser-14.1.0.jar\n\tinstall -p -m 0755 exomiser-rest-prioritiser-14.1.0.jar $(DESTDIR)$(JARDIR)/\n\t$(RM) exomiser-rest-prioritiser-14.1.0.jar\nelse\n\t@echo \"Custom rest-priotiser path provided; creating symlink\"\n\tln -sf $(EXRP_FILE) $(DESTDIR)$(JARDIR)/$(notdir $(EXRP_FILE))\nendif\n\n\n# For PREFIX!=.\ninstall-exomiser-2:\n\tinstall -D -p -m 0755 $(PROPERTIES) $(DESTDIR)$(ETCDIR)/$(ANNOTSV)\n\n\n# For PREFIX==.\ninstall-exomiser-3:\n\t@echo \"\"\n\t@echo \"--> Exomiser data installed\"\n\ninstall-mouse-annotation: $(if $(USEANNODIR),,Annotations_Mouse_$(MOUSEVERSION).tar.gz) \nifndef USEANNODIR\n\t@echo \"\"\n\t@echo \"Installation of mouse annotation:\"\n\t@echo \"\"\t\n\t$(MKDIR) $(DESTDIR)$(SHAREDIR)/$(ANNOTSV)/\n\ttar -xf Annotations_Mouse_$(MOUSEVERSION).tar.gz -C $(DESTDIR)$(SHAREDIR)/$(ANNOTSV)/\n\t$(RM) -rf Annotations_Mouse_$(MOUSEVERSION).tar.gz\n\t@echo \"\"\n\t@echo \"--> Mouse annotation installed\"\nelse\n\t@echo \"\"\n\t@echo \"Flag for custom annotationDir; skipping local install of mouse annotations\"\n\t@echo \"\"\nendif\n\n\nAnnotations_%.tar.gz:\n\t@echo \"\"\n\t@echo \"Download AnnotSV supporting data files:\"\n\t@echo \"\"\n\tcurl -C - -LO https://www.lbgi.fr/~geoffroy/Annotations/$@\n\n%_phenotype.zip:\n\t@echo \"\"\n\t@echo \"Download Exomiser supporting data files:\"\n\t@echo \"\"\n\tcurl -C - -LO https://data.monarchinitiative.org/exomiser/data/$@\n\n\n# make uninstall\n.PHONY: uninstall\n\nifeq ('$(PREFIX)' , '/usr/local')\nuninstall: uninstall1 uninstall4\nelse ifeq ('$(INSTALLDIR1)' , '$(INSTALLDIR2)')\nuninstall: uninstall1 uninstall2 uninstall4\nelse\nuninstall: uninstall1 uninstall2 uninstall3 uninstall4\nendif\n\nuninstall1:\n\t@echo \"\"\n\t@echo \"Uninstalling of $(ANNOTSV)\"\n\t@echo \"------------------------\"\n\t$(RM) -f $(DESTDIR)$(BINDIR)/$(ANNOTSV)\n\t$(RM) -f $(DESTDIR)$(BINDIR)/INSTALL_annotations.sh\n\t$(RM) -f $(DESTDIR)$(BINDIR)/INSTALL_code.sh\n\t$(RM) -rf $(DESTDIR)$(TCLDIR)/$(ANNOTSV)\n\t$(RM) -rf $(DESTDIR)$(PYTHONDIR)/$(ANNOTSV)\n\t$(RM) -rf $(DESTDIR)$(PYTHONDIR)/variantconvert\n\t$(RM) -rf $(DESTDIR)$(DOCDIR)/$(ANNOTSV)\n\t$(RM) -rf $(DESTDIR)$(SHAREDIR)/$(ANNOTSV)\n\t$(RM) -rf $(DESTDIR)$(BASHDIR)/$(ANNOTSV)\n\t$(RM) -rf $(DESTDIR)$(ETCDIR)/$(ANNOTSV)\n\t$(RM) -rf $(DESTDIR)$(TESTSDIR)/$(ANNOTSV)\n\t$(RM) -rf $(DESTDIR)$(PREFIX)/Makefile\n\t$(RM) -rf $(DESTDIR)$(PREFIX)/README.md\n\t$(RM) -rf $(DESTDIR)$(PREFIX)/Scoring_Criteria_AnnotSV_*.xlsx\n\t$(RM) -rf $(DESTDIR)$(PREFIX)/.git\n\t$(RM) -rf $(DESTDIR)$(PREFIX)/.gitignore\n\t$(RM) -rf $(DESTDIR)$(PREFIX)/tmp.variantconvert.txt\n\nuninstall2:\n\t$(RMDIR) --ignore-fail-on-non-empty $(DESTDIR)$(BINDIR) $(DESTDIR)$(BASHDIR) $(DESTDIR)$(TCLDIR) $(DESTDIR)$(PYTHONDIR) $(DESTDIR)$(DOCDIR) $(DESTDIR)$(SHAREDIR) $(DESTDIR)$(ETCDIR) $(DESTDIR)$(TESTSDIR)\n\nuninstall3:\n\t$(RMDIR) --ignore-fail-on-non-empty $(DESTDIR)$(PREFIX)\n\nuninstall4:\n\t@echo \"\"\n\t@echo \"Done\"\n\n"
  },
  {
    "path": "README.md",
    "content": "<p align=\"center\">\n    <img src=\"share/doc/AnnotSV/Images/AnnotSV_logo.png\" width=\"500\">\n\n<br />\n\n<div align=\"center\">\n    <h1 style=\"font-weight: bold\">An integrated tool for Structural Variations annotation and ranking</h1>\n</div>\n\n<br />\n\n# Table of contents\n\n- ## AnnotSV Annotations Engine\n    - ### [README](README.AnnotSV_3.5.7.pdf)\n    - ### [Getting Started](share/doc/AnnotSV/quickstart.md)\n    - ### [Ranking](share/doc/AnnotSV/ranking.md)\n    - ### [Annotations](share/doc/AnnotSV/annotations.md)\n- ## AnnotSV Webserver\n    - ### [Overview](share/doc/AnnotSV/webserver_overview.md)\n- ## AnnotSV issues\n\t<b>Please detail your request when <a href=\"https://github.com/lgmgeo/AnnotSV/issues\" target=\"_blank\">reporting a bug</a>:</b>\n\t- Give the version of AnnotSV and the command line used\n\t- Add/join an input file that allow to reproduce the bug\n\t- Give all the information that could have an impact on the bug reported (modifications made in the installation or in the annotation files)\n\t- Specify if you use Singularity...\n<br />\n\n# Collaborative work\n\nAnyone interested in implementing new annotations/features in AnnotSV?\n\nThanks to the [AnnotSV user community](https://lbgi.fr/AnnotSV/acknowledgments):\n\n    - Bugs could be tackled efficiently\n\n    - New ideas could be investigated faster\n\n\nWe look forward to the opportunity to work together, feel free to fork the page if you want to help :-)\n\n\n"
  },
  {
    "path": "bin/AnnotSV",
    "content": "#!/usr/bin/env tclsh\n\n############################################################################################################\n# AnnotSV 3.5.8                                                                                            #\n#                                                                                                          #\n# AnnotSV: An integrated tool for Structural Variations annotation and ranking                             #\n#                                                                                                          #\n# Copyright (C) 2017-present Veronique Geoffroy (veronique.geoffroy@inserm.fr)                             #\n#                                                                                                          #\n# This is part of AnnotSV source code.                                                                     #\n#                                                                                                          #\n# This program is free software; you can redistribute it and/or                                            #\n# modify it under the terms of the GNU General Public License                                              #\n# as published by the Free Software Foundation; either version 3                                           #\n# of the License, or (at your option) any later version.                                                   #\n#                                                                                                          #\n# This program is distributed in the hope that it will be useful,                                          #\n# but WITHOUT ANY WARRANTY; without even the implied warranty of                                           #\n# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the                                             #\n# GNU General Public License for more details.                                                             #\n#                                                                                                          #\n# You should have received a copy of the GNU General Public License                                        #\n# along with this program; If not, see <http://www.gnu.org/licenses/>.                                     #\n############################################################################################################\n\n# non-zero exit codes --> usually interpreted as error cases\n# zero exit code --> Terminate the process without error\n# exit <=> exit 0 (default)\n\nglobal g_AnnotSV\n\nproc getScriptDirectory {} {\n    set scriptFilePath [file normalize [info script]]\n    set scriptDir [file dirname $scriptFilePath]\n    return $scriptDir\n}\n\n#if {[info exists env(ANNOTSV)]} {\n#    regsub \"/$\" $env(ANNOTSV) \"\" env(ANNOTSV)\n#}\n#set ANNOTSVinstallDir [file normalize \"$env(ANNOTSV)\"]\n\n\n# Setting of g_AnnotSV(installDir), g_AnnotSV(etcDir), g_AnnotSV(docDir), g_AnnotSV(tclDir) and g_AnnotSV(bashDir):\nset binDirFromScript [getScriptDirectory]\nregsub \"/bin$\" $binDirFromScript \"\" binDirFromScript\nset g_AnnotSV(installDir) \"$binDirFromScript\"\nset g_AnnotSV(etcDir)     \"$g_AnnotSV(installDir)/etc/AnnotSV\"\nset g_AnnotSV(docDir)     \"$g_AnnotSV(installDir)/share/doc/AnnotSV\"\nset tclVersion [info tclversion]\nset g_AnnotSV(tclDir)     \"$g_AnnotSV(installDir)/share/tcl${tclVersion}/AnnotSV\"\nif {![file exists $g_AnnotSV(tclDir)]} {\n    set g_AnnotSV(tclDir) \"$g_AnnotSV(installDir)/share/tcl/AnnotSV\"\n}\nset g_AnnotSV(bashDir)    \"$g_AnnotSV(installDir)/share/bash/AnnotSV\"\n# g_AnnotSV(annotationsDir) is set to \"$g_AnnotSV(installDir)/share/AnnotSV\" in AnnotSV-config.tcl\n\n# Setting of \"auto_path\" for the use of the Tcl packages added in AnnotSV\nset auto_path [linsert $::auto_path 0 $g_AnnotSV(tclDir)/tcllib]\n\nsource $g_AnnotSV(tclDir)/AnnotSV-benignsv.tcl\nsource $g_AnnotSV(tclDir)/AnnotSV-candidategenes.tcl\nsource $g_AnnotSV(tclDir)/AnnotSV-clingen.tcl\nsource $g_AnnotSV(tclDir)/AnnotSV-closestgenes.tcl\nsource $g_AnnotSV(tclDir)/AnnotSV-config.tcl\nsource $g_AnnotSV(tclDir)/AnnotSV-cosmic.tcl\nsource $g_AnnotSV(tclDir)/AnnotSV-cytoband.tcl\nsource $g_AnnotSV(tclDir)/AnnotSV-encodeblacklist.tcl\nsource $g_AnnotSV(tclDir)/AnnotSV-exac.tcl\nsource $g_AnnotSV(tclDir)/AnnotSV-exomiser.tcl\nsource $g_AnnotSV(tclDir)/AnnotSV-extann.tcl\nsource $g_AnnotSV(tclDir)/AnnotSV-filteredVCF.tcl\nsource $g_AnnotSV(tclDir)/AnnotSV-gap.tcl\nsource $g_AnnotSV(tclDir)/AnnotSV-gccontent.tcl\nsource $g_AnnotSV(tclDir)/AnnotSV-gencc.tcl\nsource $g_AnnotSV(tclDir)/AnnotSV-general.tcl\nsource $g_AnnotSV(tclDir)/AnnotSV-genes.tcl\nsource $g_AnnotSV(tclDir)/AnnotSV-haploinsufficiency.tcl\nsource $g_AnnotSV(tclDir)/AnnotSV-help.tcl\nsource $g_AnnotSV(tclDir)/AnnotSV-loeuf-pLI.tcl\nsource $g_AnnotSV(tclDir)/AnnotSV-ncbi.tcl\nsource $g_AnnotSV(tclDir)/AnnotSV-omim.tcl\nsource $g_AnnotSV(tclDir)/AnnotSV-pathogenicsv.tcl\nsource $g_AnnotSV(tclDir)/AnnotSV-pathogenicsnvindel.tcl\nsource $g_AnnotSV(tclDir)/AnnotSV-phenogenius.tcl\nsource $g_AnnotSV(tclDir)/AnnotSV-regulatoryelements.tcl\nsource $g_AnnotSV(tclDir)/AnnotSV-ranking.tcl\nsource $g_AnnotSV(tclDir)/AnnotSV-repeat.tcl\nsource $g_AnnotSV(tclDir)/AnnotSV-segdup.tcl\nsource $g_AnnotSV(tclDir)/AnnotSV-tad.tcl\nsource $g_AnnotSV(tclDir)/AnnotSV-userBED.tcl\nsource $g_AnnotSV(tclDir)/AnnotSV-variantconvert.tcl\nsource $g_AnnotSV(tclDir)/AnnotSV-vcf.tcl\nsource $g_AnnotSV(tclDir)/AnnotSV-write.tcl\n\n# Setting of g_AnnotSV(Version):\nif {![info exists g_AnnotSV(Version)]} {\n    set configFile \"$g_AnnotSV(tclDir)/AnnotSV-config.tcl\"\n    foreach L [LinesFromFile $configFile] {\n\tif {[regexp \"^# AnnotSV (\\[0-9\\]+.\\[0-9\\]+(.\\[0-9\\]+)?)\" $L match version]} {\n\t    set g_AnnotSV(Version) \"$version\"\n\t    break\n\t}\n    }\n}\nif {![info exists g_AnnotSV(Version)]} {\n    set g_AnnotSV(Version) \"X.X\"\n}\n\nputs \"AnnotSV $g_AnnotSV(Version)\"\nif {[regexp \"\\-version|\\-Version\" $argv]} {\n    exit\n}\nputs \"\"\nputs \"Copyright (C) 2017-current GEOFFROY Veronique\"\nputs \"\"\nputs \"Please feel free to create a Github issue for any suggestions or bug reports (https://github.com/lgmgeo/AnnotSV/issues)\"\nputs \"\"\nputs \"Tcl/Tk version: $tclVersion\"\nputs \"\"\nputs \"Application name used:\"\nputs \"$g_AnnotSV(installDir)\\n\\n\"\n\nset tclVersion [split $tclVersion \".\"]\nif {[lindex $tclVersion 0] < 8 || ([lindex $tclVersion 0] eq 8 && [lindex $tclVersion 1] < 5)} {\n    puts \"AnnotSV requires a release of the Tcl distribution starting with version 8.5.\"\n    puts \"(AnnotSV has not been tested with lower version)\"\n}\n\n## No argument given:\nif {$argv == \"\"} {\n    puts \"Arguments are missing see help below\\n\"\n    showHelp; exit 0\n}\n\n## Needing help?\nif {[regexp -nocase \"help\" $argv]} {showHelp; exit 0}\n\n## Downloading configuration:\nconfigureAnnotSV $argv\n\n\n## Depending of the VCF or BED input format:\nif {[regexp -nocase \"\\\\.vcf(.gz)?$\" $g_AnnotSV(SVinputFile)]} {\n    ## SVinputfile is a VCF?\n    ## -> need to be formated in bed\n    set g_AnnotSV(bedFile) [VCFsToBED \"$g_AnnotSV(SVinputFile)\"]\n} else {\n    ## SVinputfile is a BED\n    set g_AnnotSV(bedFile) $g_AnnotSV(SVinputFile)\n    regsub -nocase \".bed$\" $g_AnnotSV(bedFile) \".header.tsv\" BEDinputHeaderFile\n    if {\"$g_AnnotSV(bedFile)\" ne \"$BEDinputHeaderFile\"} {file delete -force $BEDinputHeaderFile}\n    createBEDinputHeaderFile\n    addNAinSamplesIDbedCol\n} \n\n## Check VariantConvert configuration:\n######################################\ncheckVariantconvertConfigfile\n\n## Genes annotations:\n#####################\n\nputs \"...checking the annotation data sources ([clock format [clock seconds] -format \"%B %d %Y - %H:%M\"])\"\n\n# Annotation of genes depending of the transcripts (RefSeq or ENSEMBL) ?\nif {$g_AnnotSV(tx) eq \"RefSeq\"} {\n    checkGenesRefSeqFile\n} else {\n    checkGenesENSEMBLfile\n}\n# Annotation with GenCC?\ncheckGenCCgeneFile\n# Annotation with OMIM?\ncheckNCBIandHGNC\nmemorizeGeneNameAlias\ncheckOMIMfile\ncheckMorbidfile\n# Annotation with HI (Haploinsufficiency)?\ncheckHIfile\n# Annotation with ClinGen?\ncheckClinGenFile\n# Annotation with Exomiser?\n# checkNCBI (done with OMIM)\ncheckExomiserInstallation\n# Annotation with PhenoGenius?\ncheckPhenoGeniusCli\n# Annotation with LOEUF\ncheckLOEUFfile\n\n## SVincludedInFt:\n##################\n# Annotations with benign genes or genomic regions?\ncheckBenignFiles\ncheckOverlappedGenesBenignFiles\n\n# Annotation with GeneIntolerance (ExAC)?\ncheckGeneIntoleranceFile\ncheckCNVintoleranceFile\n\n## Breakpoint annotations:\n##########################\n# Annotation with GC content?\ncheckFASTAfiles\n# Annotation with Repeat?\ncheckRepeatFile\n# Annotation with Segmental Duplication?\ncheckSegDupFile\n# Annotation with Gap?\ncheckGapFile\n# Annotation with ENCODE blacklist?\ncheckENCODEblacklistFile\n# Cytoband\ncheckCytoband\n\n## FtIncludedInSV annotations:\n##############################\n# Annotations with pathogenic genes or genomic regions?\ncheckPathogenicFiles\n# Annotations with pathogenic SNV/indel?\ncheckPathoSNVindelFile\n# Annotation with Regulatory Elements?\ncheckPromoterFile\ncheckEAfiles\ncheckGHfiles\ncheckMiRTargetLinkFiles\ncheckABCfiles\ncheckMPRAfiles\n# Annotation with TAD?\ncheckTADfiles\n# Annotation with COSMIC?\ncheckCOSMICfile\n\n# Users BED regions annotations files:\n# (from $ANNOTSV/share/AnnotSV/Annotations_$g_AnnotSV(organism)/Users/GRCh*/*ncludedIn*/*.bed)\n##############################################################################################\ncheckUsersBED\n\n# Users Gene-based annotation files:\n# (from $ANNOTSV/Annotations_$g_AnnotSV(organism)/*/ and from user command lines \"-externalGeneFiles\")\n######################################################################################################\n# g_AnnotSV(extann) has been initialized in AnnotSV-config.tcl\n# g_AnnotSV(extann) will be completed in AnnotSV-exomiser.tcl\nset geneBasedDir \"$g_AnnotSV(annotationsDir)/Annotations_$g_AnnotSV(organism)/Gene-based\"\nforeach annotFile [glob -nocomplain $geneBasedDir/*/*.tsv] {\n    if {[regexp \"_DGV_samplesInStudies.tsv$\" $annotFile]} {continue}\n    lappend g_AnnotSV(extann) $annotFile\n}\nforeach annotFile [glob -nocomplain $geneBasedDir/*/*.tsv.gz] {\n    lappend g_AnnotSV(extann) $annotFile\n}\nset userDir \"$g_AnnotSV(annotationsDir)/Annotations_$g_AnnotSV(organism)/Users/\" \nforeach annotFile [glob -nocomplain $userDir/*.tsv] {\n    lappend g_AnnotSV(extann) $annotFile\n}\nforeach annotFile [glob -nocomplain $userDir/*.tsv.gz] {\n    lappend g_AnnotSV(extann) $annotFile\n}\nforeach annotFile $g_AnnotSV(externalGeneFiles) {\n    lappend g_AnnotSV(extann) $annotFile\n}\n# Depending of the organism, genes based annotation can be absent:\nif {$g_AnnotSV(extann) eq \"\"} {set g_AnnotSV(geneBasedAnn) 0} else {set g_AnnotSV(geneBasedAnn) 1} \n\n\n\n# DISPLAY\nputs \"\"\nputs \"...listing arguments\"\nputs \"\\t******************************************\"\nputs \"\\tAnnotSV has been run with these arguments:\"\nputs \"\\t******************************************\"\nset lKey [array names g_AnnotSV]\nforeach key [lsort $lKey] {\n    if {[regexp \"ABCann|GHann|MPRAann|EAann|Ann|bashDir|bedFile|docDir|etcDir|extann|installDir|outputColHeader|ranking|genes|samplesidTSVcol|svtTSVcol|tclDir|userDir|Version$\" $key]} {continue}\n    if {$g_AnnotSV($key) eq \"\"} {continue}\n    puts \"\\t-$key $g_AnnotSV($key)\"\n}\nputs \"\\t******************************************\\n\"\n\n\n# Annotation with the gene track \ngenesAnnotation\nOrganizeAnnotation\n\nif {[regexp \"\\\\.bed$\" $g_AnnotSV(SVinputFile)]} {\n    file delete -force $BEDinputHeaderFile\n}\nputs \"\\n...AnnotSV is done with the analysis ([clock format [clock seconds] -format \"%B %d %Y - %H:%M\"])\"\n\n\n"
  },
  {
    "path": "bin/INSTALL_annotations.sh",
    "content": "#!/bin/bash\n\n############################################################\n# Installing AnnotSV human annotations in a local directory\n############################################################\n\n# USAGE:\n########\n# INSTALL_annotations.sh \"Version of AnnotSV human annotation\" \"Version of Exomiser phenotype annotations\"\n\n# AIM:\n######\n# Download Exomiser and AnnotSV annotations to be used with the \"-annotationsDir\" option\n\n# CONTEXT:\n##########\n# To work with bioconda/docker/singularity, AnnotSV couldn't contain the annotations in the recipe (that would make the recipe very large, which is a bad practice in bioconda)\n# Users need to download the annotation files once and pass the directory to AnnotSV at runtime with the \"-annotationsDir\" option.\n\n\n\n\nmkdir AnnotSV_annotations\ncd AnnotSV_annotations\n\n# AnnotSV annotations\necho \"\"\necho \"Download AnnotSV supporting data files:\"\necho \"\"\ncurl -C - -LO https://www.lbgi.fr/~geoffroy/Annotations/Annotations_Human_$1.tar.gz\ntar -xf Annotations_Human_$1.tar.gz -C ./\nrm -rf Annotations_Human_$1.tar.gz\n\n# Exomiser\necho \"\"\necho \"Download Exomiser supporting data files:\"\necho \"\"\ncurl -C - -LO https://data.monarchinitiative.org/exomiser/data/$2_phenotype.zip\nunzip $2_phenotype.zip -d Annotations_Exomiser/$2/\nrm -rf 2406_phenotype.zip\n\nchmod -R 777 ./Annotations_*\n\n\n\n\n"
  },
  {
    "path": "changeLog.txt",
    "content": "############################################################################################################\n# AnnotSV 3.5.8                                                                                            #\n#                                                                                                          #\n# An integrated tool for Structural Variations annotation                                                  #\n#                                                                                                          #\n# Copyright (C) 2017-present Veronique Geoffroy (veronique.geoffroy@inserm.fr)                             #\n#                                                                                                          #\n############################################################################################################\n\n\nFor more details, please see the README file.\n\nApril, 16, 2026 AnnotSV version 3.5.8\n\t- Add a fix for the install (issue 328)\n\nApril, 14, 2026 AnnotSV version 3.5.7\n\t- Add a new annotation mode: BNDproximity\n\t\tThis mode allows matching SV with user-provided BED features based on breakpoint proximity rather than interval overlap. \n\t\tA feature is reported when both its start and end coordinates are within a user-defined distance of the SV breakpoints.\n\t\t=> A new parameter is available: -breakpointProximity (default: 100 bp)\n\t- Improve the rules for determining the frameshift status\n\nApril, 02, 2026 AnnotSV version 3.5.6\n\t- Allow to customize the weights of AnnotSV ranking criteria in the configfile\n\t- Add of the \"bracketedAltMode\" option\n\t\tDefines how bracketed ALT values in VCF are interpreted:\n\t\t\tThe SV can be considered as DEL, DUP, INS or INV, or considered as BND (TRA is always reported as BND)\n\t\t\tValues: ALL (default, infer all bracketed ALT as DEL, DUP, INS or INV)\n\t\t\t\t\tBND (treat all bracketed ALT as BND)\n\t\t\t\t\tcomma-separated SVTYPE values among DEL, DUP, INS or INV (infer only selected SVTYPE; e.g.: \"DEL,DUP\". Others are treated as BND)\n\t- Add of the \"bracketedAltMaxSize\" option\n\t    Define a maximum SV length (Mb) for SVTYPE inference from bracketed ALT values. Above 10 Mb (default), bracketed ALT is treated as BND.\n\t- Return 2 unique AnnotSV_Ids for two insertions located at the same position but with different inserted sequences (issue 324)\n\t- Add bugfix for the interpretation of square-bracketed DUP fields in the VCF (those containing the start of the duplicated sequence)\n\t- Add bugfix in the Makefile for bioconda (issue 307#issuecomment-4054614762)\n\nMarch, 03, 2026 AnnotSV version 3.5.5\n\t- Improvements of the Makefile (by @drew-sinha)\n\t\tadd flag for annotation file download, expose path to rest-prioritiser \n\t\tAnnotations installion script no longer relies on AnnotSV make/install\n\t\tapplication.properties now has version filled in programmatically\n\t\tNon-destructive install; fix git install to allow repeats (still doesn't install for system apk builds)\n\nFebruary, 27, 2026 AnnotSV version 3.5.4\n\t- Improvements of the Makefile (by Bradford Powell @bpow-patch)\n\t\tUpdate install-exomiser-2 command in Makefile to support PREFIX\n\nSeptember, 12, 2025, AnnotSV version 3.5.3\n\t- Improvments of the INSTALL_annotations.sh file to be version-controlled (issue 296)\n\nAugust, 29, 2025, AnnotSV version 3.5.2\n\t- Improvements in the GeneHancer section (several sources authorized for the downloaded files)\n\t- Improvements in the tests section (test_37_SVLEN) + Makefile \n\nAugust, 21, 2025, AnnotSV version 3.5.1\n\t- Add bugfix concerning the SV_length (issue 295)\n\t- Update the exomiser application.properties file\n\t- Update the variantconvert install\n\t- Update the Copyright output\n\nJuly, 17, 2025, AnnotSV version 3.5\n\t- Add the T2T-CHM13v2.0 human annotations\n\t- Update GRCh38 and GRCh37 human annotations \n\t- Update the Exomiser install\n\t- Add bugfix concerning the AnnotSV_ranking_criteria\n\t- Add bugfix concerning the naming of temporary files. Add the pid in the file names\n\t- Add bugfix concerning the boundary mismatch for ACMG scores \n\t- Improvements in the tests section\n\t- Add the PacBio-CoLoRS Benign SV annotations (Long Read Sequencing Database, GRCh38, CHM13)\n\t- Return 2 unique AnnotSV_Ids for two translocations starting at the same position but ending at a different position \n\nMarch, 06, 2025, AnnotSV version 3.4.6\n\t- Update the PhenoGenius install (Use of the client repo https://github.com/kyauy/PhenoGeniusCli: v.1.1.3) (issue 274)\n\nFebruary, 27, 2025, AnnotSV version 3.4.5\n\t- Update the PhenoGenius install (Use of the client repo https://github.com/kyauy/PhenoGeniusCli: v.1.1.2)\n\t- Add the \"-missingGTinSamplesid\" option (to report or not sample IDs with missing alleles in the GT field (./. or .|.) in the \"Samples_ID\" output field)\n\t- Fix a bug to set start position when converting from 0-based to 1-based format in some rare special cases (issue 266)\n\t- Fix a bug concerning Mouse annotations (issue 257)\n\nSeptember, 05, 2024, AnnotSV version 3.4.4\n\t- Temporary fix for issues #239 and #250 (wrong PRDM10 line in the GenCC file)\n\t  => Code to be removed after updating annotations\n\nAugust, 29, 2024, AnnotSV version 3.4.3\n\t- New definition of alias gene symbols used in OMIM annotation files. \n\t  Keep only aliases found with the NCBI_gene_ID and validated with genomic locations\n\t- Add a new check for the variantconvert configuration (issue 246)\n\t- Fix a bug in the AnnotSV_ID setting when POS (e.g. 1) is contained in CHROM (e.g. 1)\n\nMay, 14, 2024, AnnotSV version 3.4.2\n\t- Fix a bug when setting the cytoband annotation for large SV (issue 234)\n\t- Update the mm39 repeat annotations (issue 225)\n\nMay, 03, 2024, AnnotSV version 3.4.1\n\t- Update of the variantconvert distribution (2.0.1 installed)\n\t  Add of the \"-variantconvertMode\" option (to choose the variantconvert conversion mode)\n\t- Mouse annotation update (Add GRCm39/mm39 annotations)\n\t- Remove typos in the ranking explanation\n\t- Check the user bedtools version\n\t- Restricts the number of RE_gene features to 50, RE with \"PhenoGenius specificity = \"A\" or Exomiser gene score > 0.7\" are displayed first.\n\t- Integrate all the gene symbols for OMIM morbid annotations\n\t- Improve the creation of the benign dataset (gnomAD, 1000g and HPRC)\n\t- Add log files for the PhenoGenius install\n\nFebruary, 16, 2024, AnnotSV version 3.4\n\t- Human annotation update\n\t- Add new regulatory elements annotations:\n\t\t- Activity-by-Contact (ABC) model annotations (doi: 10.1038/s41586-021-03446-x)\n\t\t- Massively Parallel Reporter assays (MPRA) annotations (doi: 10.1038/s41467-019-11526-w)\n\t- Add novel benign SV annotation sources:\n\t\t- from gnomad v4 (GRCh38) (issue 201)\n\t\t- from the Human Pangenome Reference Consortium (HPRC) dataset (PACBIO long reads, GRCh38 only) (issue 202)\n\t\t- from dbVar (NCBI’s database of genomic structural variation)\n\t- Add new phenotype prioritization method: PhenoGenius (Yauy et al., 2023, doi: 10.1101/2022.07.29.22278181)\n\t\t- Add 3 new features: PhenoGenius_score, PhenoGenius_phenotype and PhenoGenius_specificity\n\t- Add 4 new features: \n\t\t- Closest_left and Closest_right\n\t\t  AnnotSV expands the SV up to 5 megabases in both direction (left and right) and then tries to find neighboring genes\n\t\t  In both directions, the closest gene to the SV is reported\n\t\t- NCBI_gene_ID \n\t\t- Tx_version (transcript version)\n\t- Gene names are now sorted by genomic coordinates and no longer sorted alphabetically (\"Gene_name\" feature)\n\t- Fix a bug when setting the cytoband annotation (issue 210)\n\t- Fix misleading OMIM annotation (issues 156, 132)\n\t- Update of the Makefile\n\t- Update of the \"contact\" recommendations in output (from email to GitHub)\n\t- Reorganization of the GitHub .md files\n\nJanuary, 15, 2024, AnnotSV version 3.3.9\n\t- Fix a bug when setting the \"hpoVersion\" variable (issue 207)\n\nDecember, 22, 2023, AnnotSV version 3.3.8\n\t- Add of 34 unit tests\n\nNovember, 03, 2023, AnnotSV version 3.3.7\n\t- Fix a domain error (issue 199)\n\t- Include code to allow FranceGenRef benign SV annotation (856 WGS with ancestries in different regions of France)\n\t  WARNING: not supplied as part of the AnnotSV sources. \n\t- Optimize access to the exomiser application properties file for use with singularity/bioconda\n\t- Allow uppercase file extensions (\".VCF\", \".BED\" or \".VCF.GZ\") \n\t- Use the new format of the COSMIC data source \n\t- Update of the documentation in $ANNOTSV/docs/ \n\t- Update of the documentation to install AnnotSV human annotations in a local directory (INSTALL_annotations.sh) \n\t- Optimize a regexp\n\t- Fix variantconvert file name\n\nJune, 01, 2023, AnnotSV version 3.3.6\n\t- Add bug fix concerning some INV bracketed. The second breakend notation (which is just the reciprocal of the first) is now always identified as the mate breakend.\n\t- Sample IDs with missing alleles in the GT fields (\"./.\" or \".|.\") are now reported in the \"Samples_ID\" output field\n\t- Refactor variantconvert code\n\t- Allow description of REF/ALT values in SV input files with lowercase ACGT\n\t- Update of the .gitignore file \n\t- Add bug fix to report only a subset of the annotation columns provided by AnnotSV \n\t- Add of warning messages for the ranking (in case of missing required annotations)\n\t- Update the display of the default command line\n\nApril, 14, 2023, AnnotSV version 3.3.5\n\t- Add documentation on the \"-includeCI\" option\n\t- Add bugfix for variantconvert use in GRCh38 (when setting the REF in the VCF output file)\n\t- Add bugfix during the install (depending on the environment)\n\nApril, 07, 2023, AnnotSV version 3.3.4\n\t- Among the “po_P_*_*” features, redundancy is now removed ONLY from “po_P_*_phen” and “po_P_*_hpo”.\n\t  => AnnotSV keeps now the correspondence between “po_P_*_source”, “po_P_*_coord” and “po_P_*_percent” features.\n\t- Improvment of the running time (code part: SV partially overlapping with an established benign region)\n\t- Update of the Makefile (variantconvert install)\n\t- Remove requirement for ANNOTSV environment variable\n\t- Add of the \"INSTALL_code.sh\" and \"INSTALL_annotations.sh\" bash files (for a basic manual installation)\n\t- Add a check of the \"#CHROM\" header line\n\t- Add of the \"-variantconvertDir\" option (path of the variantconvert directory). By default, the variantconvert tool distributed by annotSV is used.\n\nMarch, 30, 2023, AnnotSV version 3.3.3\n\t- Add bugfix for large input file\n\nMarch, 28, 2023, AnnotSV version 3.3.2\n\t- Add bugfix for SV partially overlapping with an established benign region. Ranking Impact\n\t- Improve the 40 criteria (Loss) in the SV ranking\n\t- Restrict the number of \"po_B_*_someG_*\" features to 20\n\nMarch, 24, 2023, AnnotSV version 3.3.1\n\t- Add bugfix with the use of the SVminSize option\n\t- Report the minimal LOEUF value (among those of all overlapped genes) in the SV full length annotation\n\t- Update of the variantconvert distribution (1.2.2 installed)\n\nMarch, 23, 2023, AnnotSV version 3.3\n\t- Add bugfix regarding genomic start coordinates. TSV and VCF output files are now both 1-based, with inclusive-end (whatever the input file format)\n\t- Add interpretation of the square-bracketed SV breakend notations within the VCF. \n\t  This new module relies on the homogenization rules provided within the variant-extractor tool developed by Rodrigo Martín.\n\t- Update of the variantconvert distribution (1.2.1 installed)\n\t- Automation of the variantconvert module installaton\n\t- Reformat of the unannotated.tsv file\n\t- Add of the .gitignore file\n\t- VCF format handling update. According to the VCF 4.4 specification, the SVTYPE has now been deprecated (due to redundancy with ALT). \n\t  The SV type is now extracted primarily from the ALT column, then from the SVTYPE field in the INFO column if available.\n\t- Add bugfix for the TAD annotations update process\n\nJanuary, 31, 2023, AnnotSV version 3.2.3\n\t- Report of the \"Samples_ID\" column in ALL outputs (default, sample = NA) (required by variantconvert)\n\t- Add the creation of a VCF output file from a \"BED\" SV input file. The \"-vcf\" and \"-svtBEDcol\" options are required.\n\t- In VCF output, the GT is set to “1/.” for each SV if the GT is not given in input (BED input file)\n\t- Add bugfix concerning Mouse annotation\n\nJanuary, 06, 2023, AnnotSV version 3.2.2\n\t- Add bugfix concerning the use of variantconvert to create the VCF output file (GRCh37/GRCh38, configfiles)\n\nDecember, 21, 2022, AnnotSV version 3.2.1\n\t- Add bugfix concerning the partial overlap with some specific dbVar SV (same start and end locations)\n\nDecember 13, 2022, AnnotSV version 3.2\n\t- Add of a new output format: VCF\n\t- Add partial overlap annotation:\n\t\t- Add 4 benign gain SV annotation: po_B_gain_allG_source, po_B_gain_allG_coord, po_B_gain_someG_source, po_B_gain_someG_coord\n\t\t- Add 4 benign loss SV annotation: po_B_loss_allG_source, po_B_loss_allG_coord, po_B_loss_someG_source, po_B_loss_someG_coord\n\t\t- Add 5 pathogenic gain SV annotation: po_P_gain_phen, po_P_gain_hpo, po_P_gain_source, po_P_gain_coord, po_P_gain_percent\n\t\t- Add 5 pathogenic loss SV annotation: po_P_loss_phen, po_P_loss_hpo, po_P_loss_source, po_P_loss_coord, po_P_loss_percen\n\t- Add the 2B, 2G and 4O criteria (Loss) in the SV ranking\n\t- Add the 2B, 2C, 2F, 2G and 4O criteria (Gain) in the SV ranking\n\t- Update of the \"make uninstall\"\n\nSeptember 12, 2022, AnnotSV version 3.1.3\n\t- Human annotation update\n\t- Use of the new ClinGen data source format (\"OMIM ID\" no longer reported)\n\t- Removing of the DDG2P gene annotations (to avoid redundancy with GenCC)\n\t- Documentation update \n\nJuly 10, 2022, AnnotSV version 3.1.2\n\t- Add important bugfix concerning the GRCh38 coordinates of the morbid genes\n\t- Add bugfix concerning some Overlapped_CDS_percent values\n\nNovember 25, 2021, AnnotSV version 3.1.1\n\t- Add bugfix when setting the ANNOTSV global environmental variable with a final \"/\"\n\t- Documentation update\n\nNovember 08, 2021, AnnotSV version 3.1\n\t- Change the -genomeBuild default value to \"GRCh38\" (instead of GRCh37)\n\t- Use boolean values (instead of \"yes\"/\"no\") for the following option values: -candidateGenesFiltering, -includeCI, -overwrite, -reciprocal, -REreport, -REselect1 and -REselect2\n\t- Add the Children’s Mercy Research Institute Benign SV annotations (n=502 WGS)\n\t- Add the GenCC database for Gene-Disease relationship annotations\n\t- Add CytoBand annotation\n\t- Add novel regulatory element annotation:\n\t\t- Add miRNA annotation (from miRTargetLink)\n\t\t- Complete the RE_gene column output (the regulated gene name is detailed with more information: candidate gene annotation \n\t\tand data sources (RefSeq, ENSEMBL, EnhancerAtlas, GeneHancer and/or miRTargetLink))\n\t\t- Add the \"-REselect1\" and \"-REselect2\" options to filter the RE_gene output\n\t- Update the benign SV annotation method:\n\t\t- Add the \"-benignAF\" option to change the allele frequency threshold used to select the benign SV in the data sources\n\t\t- Add 4 annotation columns: B_gain_AFmax, B_loss_AFmax, B_ins_AFmax and B_inv_AFmax (maximum allele frequency of the reported benign genomic regions)\n\t- Add new details in the\"AnnotSV_ranking_criteria\" output column: (i) detailed scoring points and (ii) remove gene names redundancy\n\t- Add new warnings if the compound heterozygosity analysis is not processed\n\t- Add the \"-version\" option\n\t- Take into account of a new format in the downloaded OMIM data (approved gene symbol)\n\t- Add bugfix in case of leading or trailing white space in SV type values from the SV input BED file\n\t- Add bugfix in case of no external BED annotation files used\n\t- External BED annotation files can now also be used to report any feature overlapped with the SV (even with 1bp overlap)\n\t- Add bugfix concerning the use of the \"-candidateGenesFiltering\" option\n\t- Include \"NA\" in the \"-rankFiltering\" default option (default = \"1-5,NA\")\n\t- Add bugfix concerning the use of the \"split\" annotationMode\n\t- Add bugfix in the SV input BED file, last column could not have empty values. Replaced with \".\" if empty\n\t- Add bugfix in section 5 of the SV ranking\n\t- Set the ACMG_class to \"NA\" if not defined \n\t- Update/Add Mouse annotations (CytoBand, miRNA from miRTargetLink)\n\nDecember 18, 2020, AnnotSV version 3.0\n\t- Major code rewrite and annotations sources reorganization\n\t\t- Significant modification of the annotations column names\n\t- New SV ranking based on the ACMG guidelines (Riggs et al 2020) as a replacement of the previous ranking (v2.5).\n\t\t- Add 3 annotation columns: AnnotSV ranking score; ranking decision criteria; AnnotSV ranking class\n\t- Merge pathogenic SV annotation (from multiple sources)\n\t\t- Pathogenic SV sources: dbVar, ClinGen, ClinVar, OMIM morbid genes\n\t\t- Add 12 annotation columns: \n\t\t  P_gain_phen; P_gain_hpo; P_gain_source; P_gain_coord; \n\t\t  P_loss_phen; P_loss_hpo; P_loss_source; P_loss_coord; \n\t\t  P_ins_phen; P_ins_hpo; P_ins_source; P_ins_coord; \n\t\t  P_inv_phen; P_inv_hpo; P_inv_source; P_inv_coord\n\t\t- Remove previous annotation columns from dbVar\n\t- Merge benign SV annotation (from multiple sources)\n\t\t- Benign SV sources: DGV, ClinVar, ClinGen, DDD, gnomAD, 1000g and IMH\n\t\t- Add 8 annotation columns: \n\t\t  B_gain_source; B_gain_coord; B_loss_source; B_loss_coord; \n\t\t  B_ins_source; B_ins_coord; B_inv_source; B_inv_coord\n\t\t- Remove previous annotation columns from DDD, DGV, gnomAD, 1000g and IMH\n\t- Add pathogenic SNV/indel annotation (from ClinVar)\n\t- Add new regulatory elements annotation (EnhancerAtlas)\n\t- Merge regulatory elements annotations into a single column (RefSeq/ENSEMBL, EnhancerAtlas, GeneHancer)\n\t- Update of the annotation data sources with the latest available versions\n\t- The \"overlap\" option default is now set to 100 % in order to be compliant with the ACMG guidelines\n\t- Add the percent of the CDS overlapped with the SV (in the \"split\" annotation lines)\n\t- Add the number of overlapped genes in the \"full\" annotation lines\n\t- By default, AnnotSV now expands the \"start\" and \"end\" SV positions with the VCF confidence intervals (CIPOS, CIEND) around the breakpoints (see the \"includeCI\" option)\n\nNovember 06, 2020, AnnotSV version 2.5.2\n\t- Add the pLI annotation from gnomAD (pLI_gnomAD), update the pLI annotation from ExAC (pLI_ExAC)\n\t- Add the \"LOEUF_bin\" annotation (gnomAD)\n\t- Add the \"tx start\", \"tx end\" and \"Number of exons\" annotations \n\t\tThe \"tx length\" column has been renamed \"overlapped tx length\"\n\t  \tThe \"CDS length\" column has been renamed \"overlapped CDS length\" \n\t- If not provided, the EXOMISER_GENE_PHENO_SCORE is set to \"-1.0\"\n\t- Update README.md\n\nOctober 13, 2020: AnnotSV version 2.5.1\n\t- fix:  Add bugfix when the \"SV type\" is badly formatted\n\nOctober 12, 2020: AnnotSV version 2.5\n\t- Add of the \"ENCODE blacklist\", \"Segmental Duplication\" and \"Gap\" annotation datasets\n\t- Fix a critical bug for DGV annotation (GRCh38)\n\t- Add the distance / type to the nearest splice site after considering both breakpoints (distNearestSS and nearestSStype columns)\n\t- Add the in-frame / out-of-frame information from overlapping genes (frameshift column)\n\t- Add decision criteria explaining the ranking (previously available as a separate file)\n\t- Remove of the ranking decision output file (*.ranking.tsv)\n\t- Change the names of the values for the \"tx\" option:\n\t\tNM      >>  RefSeq\n\t\tENST    >>  ENSEMBL\t\n\t- Add bugfix for exomiser use (don't use some badly formatted NCBI gene ID)\n\t- Add bugfix allowing to use a configfile located in the same directory as the input file\n\nJuly 30, 2020: AnnotSV version 2.4\n\t- Update of the annotations sources (see the corresponding README section)\n\t- Add of the COSMIC SV dataset (Cancer)\n\t- AnnotSV now reports either RefSeq or Ensembl gene transcripts. Use the new \"-tx\" option to report either NM or ENST transcripts\n\t  => The « NM » column has been renamed « tx »\n\t  => The “RefGene” directory has been renamed \"Genes\"\n\t- Add of the \"Samples_ID\" feature (report of the sample names for which the SV was called)\n\t  => Can be disabled in the AnnotSV configfile\n\t- Include the new \"-externalGeneFiles\" option to pass external gene file(s) path in the command line\n\t- Integration of 4 Tcl packages (http/tar/csv/json) in the AnnotSV distribution\n\t- Use of the “bcftools” toolset (Li, 2011) to fix a bug with multiallelic sites from VCF input file(s)\n\t  => bcftools is now required if using VCF input file(s)\n\t- Fix the output columns order not being the same depending on the system environment\n\t- \"1000g_AF\" and \"1000g_max_AF\" features are not reported anymore\n\t- Add bugfix concerning the CDS length and tx length calculation\n\t- Add bugfix concerning annotation of 2 SV with the same coordinates but from different types (DEL, DUP...)\n\t- Add bugfix with gzipped VCF files as input\n\t- Add bugfix concerning the running of bash scripts (illegal use of | or |& in command)\n\t- Add bugfix concerning the use of the \"-snvIndelFiles\" and \"-candidateSnvIndelSamples\" options\n\t- Add bugfix to the Exomiser module\n\t- Add bugfix concerning the AnnotSV installation when PREFIX is not the current directory\n\t- Add bugfix concerning the use of a big \"candidateGenesFile\"\n\nDec 20, 2019: AnnotSV version 2.3\n\t- Include phenotype-driven annotations (HPO), based on Exomiser (Smedley et al., 2015)\n\t- Include the lift-over GRCh38 gnomAD SV frequency annotation\n\t- Include the \"-annotationsDir\" option to pass the annotations directory to AnnotSV at run time\n\t- New \"AnnotSV ID\" settings (to ensure unique SV identifiers)\n\t- Deletion filtering improvement\n\t- Integration of the gnomAD frequency data in the ranking\n\t- AnnotSV can now create two other output files:\n\t\t- A report of unannotated variants (e.g. badly formatted SV, variant length < SVminSize...)\n\t\t- A report of the decisions that explain the ranking of each SV\n\t- Change the names of the misleading following options: \n\t\tvcfFiles           >>  snvIndelFiles\n\t\tvcfPASS            >>  snvIndelPASS\n\t\tvcfSamples         >>  snvIndelSamples\n\t\tfilteredVCFfiles   >>  candidateSnvIndelFiles\n\t\tfilteredVCFsamples >>  candidateSnvIndelSamples\n\t- Annotations are not distributed anymore with the sources but downloaded during the installation with the Makefile\n\t- AnnotSV executable is now directly located in $ANNOTSV/bin to respect the FHS\n\t- Add bugfix concerning the management of BED files\n\t- Add bugfix for the report of the compound heterozygosity (1 SV + 1 SNV/indel)\n\t- Add bugfix concerning the -candidateGenesFiltering option\n\t- Add bugfix concerning the DGV metrics\n\t- Add bugfix concerning the use of the \"-sort\" Linux command (whose behavior is OS dependant)\n\t- Add bugfix concerning the use of \"external gene annotation files\"\n\t- Add bugfix concerning the -txFile option\n\nJuly 09, 2019: AnnotSV version 2.2\n\t- AnnotSV follows now the Filesystem Hierarchy Standard (FHS). Installation can be easily done using a Makefile\n\t- Include 2 new options:  \"-candidateGenesFiltering\" to select the SV overlapping a gene from the \"candidateGenesFile\" (default = no)\n\t\t\t\t  \"-rankFiltering\" to select the SV of a user-defined specific class (from 1 to 5), default = \"1-5\"\n\t- Users can now disable default annotation (through a configfile) provided by AnnotSV and only have user defined annotations\n\t- AnnotSV is now available for the Mouse genome SV annotations\n\t- Add the UTR/CDS's information from overlapping genes (location2 column)\n\t- Add bugfix concerning the use of the \"-candidateGenesFile\" and \"-reciprocal\" options\n\t- Add bugfix concerning the report of the SV length\n\t- Add bugfix concerning the report of gene-based annotation on the full lines\n\nApr 18, 2019: AnnotSV version 2.1\n\t- Include the gnomAD SV frequency annotation\n\t- Include the Ira M. Hall’s lab SV frequency annotations\n\t- Include GeneHancer annotation (an integrated compendium of human promoters, enhancers and their inferred target genes)\n\t  WARNING: not supplied as part of the AnnotSV sources. Users need to request the up-to-date GeneHancer data dedicated to AnnotSV\n\t- Include 2 new options: \"-overwrite\" to overwrite existing output results (default = yes)\n\t                         \"-txFile\" to specify a list of preferred genes transcripts to be used in priority during the annotation\n\t- Default of the -SVinputInfo option is now set to 1 (the additional fields from the SV input file are reported in the outputfile) \n\t- Large bed annotation files are presorted, in order to be compatible for server with low specifications\n\t- Improve error messages and exit management (return a non-zero exit code in case of error or zero if all went fine)\n\t- AnnotSV minimum requirement is now starting with Tcl 8.5\n\t- Add bugfix concerning the homozygous and heterozygous SNV/indel counts within the SV to annotate\n\t- Add bugfix for the SV ranking (when the -metrics option was set to \"fr\")\n\t- Add bugfix concerning the \"-reciprocal\" option\n\nDec 21, 2018: AnnotSV version 2.0\n\t- Add ranking/classification for SV in 5 classes (from benign to pathogenic)\n\t- Include 12 additional annotations including:\n\t\t-> the creation of a unique identifier for each SV\n\t\t-> the SV length\n\t\t-> the SV type (DEL, DUP, ...)\n\t\t-> the SV ranking/classification\n\t\t-> the OMIM morbid genes\n\t\t-> the ClinGen Haploinsufficiency Score\n\t\t-> the ClinGen Triplosensitivity Score\n\t\t-> the ACMG genes\n\t\t-> the CNV intolerance from ExAC\n\t- Add of the \"metrics\" option to change numerical values to us or fr metrics (e.g. 0.2 or 0,2)\n\t- Add bugfix concerning empty SV input file: return a non-zero exit status (1) to continue processing in a pipeline\n\t- Modification of the directories structure for the annotation. Please look at the README file.\n\t- Options: \"SVfromDBoverlap\", \"FeaturesOverlap\" and \"SVtoAnnOverlap\" have been replaced by \"reciprocal\" and \"overlap\"\n\t- By default, AnnotSV now reports the additional fields from the SV BED input file\n\t- Report of the input BED file header in the output\n\t- Update of all annotation sources provided with AnnotSV\n\nSep 28, 2018: AnnotSV version 1.2\n\t- Support the integration of user defined annotated regions imported from BED and/or TSV file(s) into the output file\n\t- Include 3 additional annotations based on the dbVar pathogenic NR SV dataset:\n\t\t-> The dbVar NR SV event types (e.g. deletion, duplication…)\n\t\t-> The dbVar NR SV accession (e.g. nssv1415016)\n\t\t-> The dbVar NR SV clinical assertion (e.g. pathogenic, likely pathogenic)\n\t- Include 1 new option (-typeOfAnnotation) to configure the types of lines produced by AnnotSV (both, full or split)\n\t- OutputFile extension will always be a “.tsv” (tab separated values) extension\n\t- Add bugfix concerning large SV and TAD boundaries annotation\n\nMay 16, 2018: AnnotSV version 1.1.1\n\t- Add bugfix concerning 1000g annotation (in some cases, an insertion could be not reported and AnnotSV stopped working properly)\n\nMar 20, 2018: AnnotSV version 1.1\n\t- Add bugfix concerning counts of the homozygous and heterozygous variants in VCF files\n\t- Support for new SV input file format: VCF file (4.3) can now be used to describe the SV to annotate (in addition to the BED format)\n\t  The \"-bedFile\" option has now been renamed \"-SVinputFile\"\n\t  The \"-bedInfo\" option has now been renamed \"-SVinputInfo\". Default is now set to 0 (the additional fields from the SV input file are not reported in the outputfile)\n\t- Report additional information while counting variants in the SNV/indel input file(s):\n\t\t-> The number of SNV/indel loaded\n\t\t-> The number of SNV/indel not considered because of the “FILTER” column value\n\t\t-> The number of SNV/indel not considered because of the absence of genotype information (“GT” value can be absent in bad VCF formatted files)\n\t\t-> The number of SV present but not considered for that purpose (only SNV/indel are taken into account)\n\t- Set the default value of the -vcfPASS option to 0 (to be non-restrictive and consider all variants in the VCF by default).\n\t- Include 2 new options (-outputDir and -outputFile) to specify the output directory and file name\n\t- Include 3 additional annotations based on the 1000 genomes phase 3 dataset:\n\t\t-> The type of event (i.e. DEL, ALU, DUP, <CN3>...)\n\t\t-> The global allele frequency\n\t\t-> The maximum observed allele frequency across populations\n\t- Include a new option (-SVminSize) to set the SV minimum size (in bp). Default is 50 (bp)\n\n\nDec 21, 2017: AnnotSV version 1.0\n\n\n\n\n"
  },
  {
    "path": "commandLineOptions.txt",
    "content": "\nCOMMAND LINE USAGE\n\n       $ANNOTSV/bin/AnnotSV -SVinputFile 'Path of your VCF or BED input file with SV coordinates' >& AnnotSV.log &\n\n\nOPTIONS\n\n-annotationsDir:                Path of the annotations directory\n\n-annotationMode:                Description of the types of lines produced by AnnotSV\n                                Values: both (default), full or split\n\n-bcftools:                      Path of the bcftools local installation\n\n-bedtools:                      Path of the bedtools local installation\n\n-benignAF:                      Allele frequency threshold to select the benign SV in the data sources\n                                Range values: [0.001-0.1], default = 0.01 (i.e. 1%)\t\n\n-bracketedAltMaxSize:           Maximum SV length (Mb) for SVTYPE inference from bracketed ALT values\n                                Values: positive float (default: 10; above 10 Mb, bracketed ALT is treated as BND)\n\n-bracketedAltMode:              Defines how bracketed ALT values in VCF are interpreted:\n                                The SV can be considered as DEL, DUP, INS or INV, or considered as BND (TRA is always reported as BND)\n                                Values: ALL (default, infer all compatible SVTYPE: DEL,DUP,INS,INV)\n                                        BND (treat all bracketed ALT as BND)\n                                        comma-separated SVTYPE values among DEL, DUP, INS or INV (infer only selected SVTYPE; e.g.: \"DEL,DUP\". Others are treated as BND)\n\n-breakpointProximity:           Maximum allowed distance (bp) between SV and feature breakpoints (start-to-start and end-to-end). \n                                Values: positive int (default: 100)\n\n-candidateGenesFile:            Path of a file containing the candidate genes of the user (gene names can be space-separated, tabulation-separated, or line-break-separated)\n\n-candidateGenesFiltering:       To select only the SV annotations (\"split\" and \"full\") overlapping a gene from the \"candidateGenesFile\"\n                                Values: 0 (default) or 1\n\n-candidateSnvIndelFiles:        Path of the filtered VCF input file(s) with SNV/indel coordinates for compound heterozygotes report (optional)\n                                Gzipped VCF files are supported as well as regular expression\n\n-candidateSnvIndelSamples:      To specifiy the sample names from the VCF files defined with the -candidateSnvIndelFiles option (sample names can be coma-separated or semicolon -separated)\n                                Default: use all samples from the filtered VCF files\n\n-genomeBuild:                   Genome build used\n                                Values: GRCh38 (default) or GRCh37 or CHM13 or or mm9 or mm10\n\n-help:                          More information on the arguments\n\n-hpo:                           HPO terms list describing the phenotype of the individual being investigated\n                                Values: use comma, semicolon or space separated class values\n                                Default = \"\" (e.g.: \"HP:0001156,HP:0001363,HP:0011304\")\n\n-includeCI:                     To expand the \"start\" and \"end\" SV positions with the VCF confidence intervals (CIPOS, CIEND) around the breakpoints\n                                AnnotSV keeps the CIPOS and CIEND information that comes first in the INFO column (even if the fields are CIPOS95, CIEND95 or tool_CIPOS, tool_CIEND).\n                                Values: 1 (default) or 0\n\n-metrics:                       Changing numerical values from frequencies to us or fr metrics (e.g. 0.2 or 0,2)\n                                Values: us (default) or fr\n\n-minTotalNumber:                Minimum number of individuals tested to consider a benign SV for the ranking\n                                Range values: [100-1000], default = 500\n\n-missingGTinSamplesid:          To report sample IDs with missing alleles in the GT field (./. or .|.) in the \"Samples_ID\" output field\n                                Values: 1 (default) or 0\n\n-outputDir:                     Output path name\n\n-outputFile:                    Output path and file name \n\n-overlap:                       Minimum overlap (%) between user features (User BED) and the annotated SV to be reported\n                                Range values: [0-100], default = 100\n\n-overwrite:                     To overwrite existing output results\n                                Values: 1 (default) or 0\n\n-promoterSize:                  Number of bases upstream from the transcription start site\n                                Default = 500\n\n-rankFiltering:                 To select the SV of a user-defined specific class (from 1 to 5; or NA)\n                                Values: use comma separated class values, or use a dash to denote a range of values\n                                (e.g.: \"3,4,5\" or \"3-5\"), default = \"1-5,NA\"\n\n-reciprocal:                    Use of a reciprocal overlap between SV and user features (only for annotations with features overlapping the SV)\n                                Values: 0 (default) or 1\n\n-REreport:                      Create a report to link the annotated SV and the overlapped regulatory elements (coordinates and sources)\n                                Values: 0 (default) or 1\n\n-REselect1:                     To report only the morbid, HI, TS, candidate and phenotype matched genes \n                                Values: 1 (default) or 0\n\t\n-REselect2:                     To report only the genes not present in \"Gene_name\"\n                                Values: 1 (default) or 0\n\n-samplesidBEDcol:               Number of the column reporting the samples ID for which the SV was called (if the input SV file is a BED)\n                               \tRange values: [4-[, default = -1 (value not given)\n                                (Samples ID should be comma or space separated) \n\n-snvIndelFiles:\t                Path of the VCF input file(s) with SNV/indel coordinates used for false positive discovery\n                                Use counts of the homozygous and heterozygous variants\n                                Gzipped VCF files are supported as well as regular expression\n\n-snvIndelPASS:                  Boolean. To only use variants from VCF input files that passed all filters during the calling (FILTER column value equal to PASS)\n                                Values: 0 (default) or 1\n\n-snvIndelSamples:               To specify the sample names from the VCF files defined from the -snvIndelFiles option\n                                Default: use all samples from the VCF files\n\n-SVinputFile:                   Path of the input file (VCF or BED) with SV coordinates\n                                Gzipped VCF file is supported\n\n-SVinputInfo:                   To extract the additional SV input fields and insert the data in the outputfile\n                                Values: 1 (default) or 0\n\n-SVminSize:                     SV minimum size (in bp)\n                                AnnotSV does not annotate small deletion, insertion and duplication from a VCF input file \n                                Default = 50\n\n-svtBEDcol:                     Number of the column describing the SV type (DEL, DUP) if the input SV file is a BED\n                                Range values: [4-[, default = -1 (value not given)\n\n-tx:                            Origin of the transcripts (RefSeq or ENSEMBL)\n                                Values: RefSeq (default) or ENSEMBL\n\n-txFile:                        Path of a file containing a list of preferred genes transcripts to be used in priority during the annotation (Preferred genes transcripts names should be tab or space separated)\n\n-variantconvertDir:             Path of the variantconvert directory\n                                (by default, the variantconvert tool distributed by annotSV is used)\n\n-variantconvertMode:            variantconvert conversion mode\n                                Values: combined (default) or full or fullsplit\n\n-version:                       Version of the AnnotSV program\n\n-vcf:                           Creation of a VCF output file format (-svtBEDcol needs to be defined too)\n                                Values: 0 (default) or 1\n\n\n"
  },
  {
    "path": "etc/AnnotSV/application.properties",
    "content": "#\n# The Exomiser - A tool to annotate and prioritize genomic variants\n#\n# Copyright (c) 2016-2018 Queen Mary University of London.\n# Copyright (c) 2012-2016 Charit Universittsmedizin Berlin and Genome Research Ltd.\n#\n# This program is free software: you can redistribute it and/or modify\n# it under the terms of the GNU Affero General Public License as\n# published by the Free Software Foundation, either version 3 of the\n# License, or (at your option) any later version.\n#\n# This program is distributed in the hope that it will be useful,\n# but WITHOUT ANY WARRANTY; without even the implied warranty of\n# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the\n# GNU Affero General Public License for more details.\n#\n# You should have received a copy of the GNU Affero General Public License\n# along with this program.  If not, see <http://www.gnu.org/licenses/>.\n#\nspring.application.name=exomiser-prioritiser-service\n\nserver.servlet.context-path=/exomiser/api/prioritise\nserver.port=XXXX\nserver.servlet.application-display-name=Exomiser Prioritiser Server\n\n#Absolute system path where the exomiser data is installed\n#exomiser.data-directory=${project.build.testOutputDirectory}\nexomiser.data-directory=YYYY\nexomiser.phenotype.data-version=ZZZZ\nexomiser.phenotype.random-walk-preload=true\n\n#Actuator configuration\ninfo.name=${server.display-name}\ninfo.build.version=${project.version}\ninfo.build.timestamp=${build.timestamp}\n"
  },
  {
    "path": "etc/AnnotSV/configfile",
    "content": "# This file is used to simplify the configuration of AnnotSV.\n# Anything behind a hashtag is considered as a comment\n# Please, feel free to change the AnnotSV options.\n\n#------------------\n# AnnotSV Options :\n#------------------\n\n-annotationMode:            \"both\"\n-benignAF:                  0.01\n-candidateGenesFiltering:   0\n-genomeBuild:               \"GRCh38\"\n-hpo:                       \"\"\n-includeCI:                 1\n-metrics:                   \"us\"\n-minTotalNumber:            \"500\"\n-overlap:                   100\n-overwrite:                 1\n-promoterSize:              500\n-rankFiltering:             \"1-5,NA\"\n-reciprocal:                0\n-snvindelPASS:              0\n-SVinputInfo:               1\n-SVminSize:                 50\n-variantconvertMode:        \"combined\"\n-vcf:                       0\n\n\n#------------------------\n# AnnotSV Output columns:\n#------------------------\n# Output column names are listed below.\n# In order to disable default annotations provided by AnnotSV, some column names (the ones that are not marked with an *) can be commented with a hash character (\"#\") by the user.\n\nAnnotSV_ID                      *\nSV_chrom                        *\nSV_start                        *\nSV_end                          *\nSV_length                       *\nSV_type                         *\nSamples_ID                      *\nAnnotation_mode                 *\n\n# Genes annotations:\nCytoBand\t\t\t\nGene_name                       *\nClosest_left\nClosest_right\nGene_count                      *\nTx                              *\nTx_version\nTx_start                        *\nTx_end                          *\nOverlapped_tx_length            *\nOverlapped_CDS_length           *\nOverlapped_CDS_percent\t\t*\nFrameshift                      *\nExon_count                      *\nLocation                        *\nLocation2                       *\nDist_nearest_SS                 *\nNearest_SS_type                 *\nIntersect_start                 *\nIntersect_end                   *\n\n# Regulatory Elements annotations:\nRE_gene                         *\n\n# Annotations with benign genes or genomic regions:\nB_gain_source                   *\nB_gain_coord                    *\nB_gain_AFmax                    *\nB_loss_source                   *\nB_loss_coord                    *\nB_loss_AFmax                    *\nB_ins_source                    \nB_ins_coord                     \nB_ins_AFmax                     \nB_inv_source                    \nB_inv_coord\nB_inv_AFmax\npo_B_gain_allG_source           *       \npo_B_gain_allG_coord            *       \npo_B_gain_someG_source\t\t*\npo_B_gain_someG_coord\t\t*\npo_B_loss_allG_source\t\t*\npo_B_loss_allG_coord\t\t*\npo_B_loss_someG_source\t\t*\npo_B_loss_someG_coord\t\t*\n\n# Annotations with pathogenic genes or genomic regions:\nP_gain_phen \t\t\t*\nP_gain_hpo \t\t\t*\nP_gain_source \t\t\t*\nP_gain_coord \t\t\t*\nP_loss_phen \t\t\t*\nP_loss_hpo \t\t\t*\nP_loss_source \t\t\t*\nP_loss_coord\t\t\t*\nP_ins_phen\nP_ins_hpo\nP_ins_source\nP_ins_coord\nP_inv_phen\nP_inv_hpo\nP_inv_source\nP_inv_coord\npo_P_gain_phen\t\t\t*\npo_P_gain_hpo\t\t\t*\npo_P_gain_source\t\t*\npo_P_gain_coord\t\t\t*\npo_P_gain_percent\t\t*\npo_P_loss_phen\t\t\t*\npo_P_loss_hpo\t\t\t*\npo_P_loss_source\t\t*\npo_P_loss_coord\t\t\t*\npo_P_loss_percent\t\t*\n\n# Annotations with pathogenic snv/indel:\nP_snvindel_nb\t\t\t*\nP_snvindel_phen\t\t\t*\n\n# Cancer\nCosmic_ID\t\t\t*\nCosmic_mut_typ\t\t\t*\n\n# Breakpoints annotations\nTAD_coordinate\nENCODE_experiment\nGC_content_left\nGC_content_right\nRepeat_coord_left\nRepeat_type_left\nRepeat_coord_right\nRepeat_type_right\nGap_left\nGap_right\nSegDup_left\nSegDup_right\nENCODE_blacklist_left\nENCODE_blacklist_characteristics_left\nENCODE_blacklist_right\nENCODE_blacklist_characteristics_right\n\n# Gene-based annotations:\nACMG\nHI                              *\nTS                              *\nGenCC_disease   \nGenCC_moi       \nGenCC_classification    \nGenCC_pmid\nNCBI_gene_ID\nHGNC_gene_ID\nDDD_status\nDDD_mode\nDDD_consequence\nDDD_disease\nDDD_pmid\nDDD_HI_percent\t\t\t\t\t*\nExAC_synZ\nExAC_misZ\nExAC_delZ\nExAC_dupZ\nExAC_cnvZ\nLOEUF_bin\t\t\t\t\t\t*\nExAC_pLI                        \nGnomAD_pLI                      *\nOMIM_morbid                     *\nOMIM_morbid_candidate           \nOMIM_ID\nOMIM_phenotype\nOMIM_inheritance\nGnomAD_pLI\t\t\t            *\nPhenoGenius_score\nPhenoGenius_phenotype\nPhenoGenius_specificity         *\nExomiser_gene_pheno_scorea      *\nHuman_pheno_evidence\nMouse_pheno_evidence\nFish_pheno_evidence\n\n# Ranking:\nAnnotSV_ranking_score           *\nAnnotSV_ranking_criteria        *\nACMG_class                      *\n\n\n#--------------------------\n# AnnotSV ranking criteria:\n#--------------------------\n# The comprehensive and detailed scoring guidelines are available at:\n# https://lbgi.fr/AnnotSV/Documentation/Scoring_Criteria_AnnotSV_latest.xlsx\n\n# Customizing the weights of AnnotSV ranking criteria\n# ---------------------------------------------------\n# To adjust the importance of each criterion in the AnnotSV ranking,\n# modify the values below. Values can be positive or negative floats.\n\n# Loss\n1A_Loss         0.00\n1B_Loss        -0.60\n2A_Loss         1.00\n2B_Loss         0.00\n2C-1_Loss       0.90\n2C-2_Loss       0.00\n2D-1_Loss       0.00\n2D-2_Loss       0.90\n2D-3_Loss       0.45\n2D-4_Loss       0.90\n2E-1_Loss       0.90\n2E-2_Loss       0.45\n2E-3_Loss       0.30\n2E-4_Loss       0.20\n2F-4O_Loss     -1.00\n2G_Loss         0.00\n2H_Loss         0.15\n3A_Loss         0.00\n3B_Loss         0.45\n3C_Loss         0.90\n4O_Loss        -1.00\n5F_Loss         0.00\n5G_Loss         0.10\n5H_Loss         0.30\n\n\n# Gain\n1A_Gain         0.00\n1B_Gain        -0.60\n2A_Gain         1.00\n2B_Gain         0.00\n2C_Gain        -1.00\n2D_Gain        -1.00\n2E_Gain         0.00\n2F_Gain        -1.00\n2G_Gain         0.00\n2H-1_Gain       0.45\n2H-2_Gain       0.00\n2I-1_Gain       0.45\n2I-2_Gain       0.45\n2I-3_Gain       0.00\n2J_Gain         0.00\n2K_Gain         0.45\n2L_Gain         0.00\n3A_Gain         0.00\n3B_Gain         0.45\n3C_Gain         0.90\n4O_Gain         0.00\n5F_Gain         0.00\n5G_Gain         0.10\n5H_Gain         0.15\n"
  },
  {
    "path": "share/bash/AnnotSV/checkPhenoGeniusCliInstall.sh",
    "content": "#!/bin/bash\n\n\n# Bash script: \n# A successfully executed code should exit with code 0. \n# Other values indicate an error. \n\n\n# Poetry is required\n####################\npoetryDir=`which poetry` \n\n# The \"$poetryDir\" directory should exist\nif [ ! -e \"$poetryDir\" ]\nthen\n\techo \"Poetry seems not to be installed\"\n\techo \"WARNING: No PhenoGenius annotations available.\"\n\texit 1\nfi\n\n\n# Poetry version\n################\n# poetryVersion=`poetry --version | sed \"s/Poetry (version //\" | sed \"s/)//\"`\n# e.g. Poetry (version 1.5.1)\n# echo \"Poetry: $poetryVersion\"\n\n\n# PhenogeniusCli install (if needed)\n####################################\nmkdir -p $ANNOTSV/share/python3/phenogeniuscli\ncd $ANNOTSV/share/python3/phenogeniuscli\nif [ ! -d PhenoGeniusCli ]\nthen\n\tgit clone https://github.com/kyauy/PhenoGeniusCli.git >> PhenoGeniusCli.install.log 2>&1\n\tcd ./PhenoGeniusCli >> PhenoGeniusCli.install.log 2>&1\n\t# Search for the last PhenoGenius version tested/validated with AnnotSV\n\tgit checkout tags/v.1.1.3 >> ../PhenoGeniusCli.install.log 2>&1\n\trm -rf .git .gitattributes .github .gitignore >> ../PhenoGeniusCli.install.log 2>&1\n\tpoetry config keyring.enabled false\n\tpoetry install &> ../poetry_install.log\nfi\n\ncd $ANNOTSV/share/python3/phenogeniuscli/PhenoGeniusCli\n\npoetry run python3 phenogenius_cli.py --help  &> ../PhenoGenius.run.test1.log\nif [ `grep -c -- \"--hpo_list\" ../PhenoGenius.run.test1.log` == \"1\" ]\nthen\n\texit 0\nelse\n\tpoetry config keyring.enabled false\n\tpoetry install &> ../poetry_install.log ;# Can be run from different servers\n\tpoetry run python3 phenogenius_cli.py --help &> ../PhenoGenius.run.test2.log\n\tif [ `grep -c -- \"--hpo_list\" ../PhenoGenius.run.test2.log` == 1 ]\n\tthen\n\t\texit 0\n\telse\n\t\techo \"phenogenius_cli.py not installed\"\t\n\t\techo \"WARNING: No PhenoGenius annotations available.\"\n\t\texit 1\n\tfi\nfi\n\n\n"
  },
  {
    "path": "share/bash/AnnotSV/searchForAFreePortNumber.bash",
    "content": "#!/bin/bash\n\n# com: Compare two sorted files line by line. Output the lines that are common, plus the lines that are unique.\n#      comm [options]... File1 File2\n#       -2 Suppress lines unique to file2\n#       -3 Suppress lines that appear in both files\n#\n# seq: print a sorted sequence of numbers from 5000 to 50000\n#\n# ss: used to dump socket statistics.\n#       -H, --no-header\n#       -n, --numeric\n#              Do not try to resolve service names. Show exact bandwidth\n#              values, instead of human-readable.\n#       -t, --tcp\n#              Display TCP sockets.\n#     e.g. \"ss -Htan\" >>> \"LISTEN    0      5                       0.0.0.0:63864                  0.0.0.0:*\"\n\ncomm -23 <(seq 5000 50000 | sort) <(ss -Htan | awk '{print $4}' | cut -d':' -f2 | sort -u) | head -n 1\n"
  },
  {
    "path": "share/doc/AnnotSV/Example/README.commands",
    "content": "\n$ANNOTSV/bin/AnnotSV -SVinputFile test1.bed -outputFile ./test1.annotated.tsv -svtBEDcol 4 -genomeBuild GRCh37 -vcf 1\n\n$ANNOTSV/bin/AnnotSV -SVinputFile test2.vcf -outputFile ./test2.annotated.tsv -genomeBuild GRCh37 -vcf 1\n\n"
  },
  {
    "path": "share/doc/AnnotSV/Example/test1.annotated.tsv",
    "content": "AnnotSV_ID\tSV_chrom\tSV_start\tSV_end\tSV_length\tSV_type\tBiologist_annotation\tBiologist_ranking\tSamples_ID\tAnnotation_mode\tCytoBand\tGene_name\tClosest_left\tClosest_right\tGene_count\tTx\tTx_version\tTx_start\tTx_end\tOverlapped_tx_length\tOverlapped_CDS_length\tOverlapped_CDS_percent\tFrameshift\tExon_count\tLocation\tLocation2\tDist_nearest_SS\tNearest_SS_type\tIntersect_start\tIntersect_end\tRE_gene\tP_gain_phen\tP_gain_hpo\tP_gain_source\tP_gain_coord\tP_loss_phen\tP_loss_hpo\tP_loss_source\tP_loss_coord\tP_ins_phen\tP_ins_hpo\tP_ins_source\tP_ins_coord\tpo_P_gain_phen\tpo_P_gain_hpo\tpo_P_gain_source\tpo_P_gain_coord\tpo_P_gain_percent\tpo_P_loss_phen\tpo_P_loss_hpo\tpo_P_loss_source\tpo_P_loss_coord\tpo_P_loss_percent\tP_snvindel_nb\tP_snvindel_phen\tB_gain_source\tB_gain_coord\tB_gain_AFmax\tB_loss_source\tB_loss_coord\tB_loss_AFmax\tB_ins_source\tB_ins_coord\tB_ins_AFmax\tB_inv_source\tB_inv_coord\tB_inv_AFmax\tpo_B_gain_allG_source\tpo_B_gain_allG_coord\tpo_B_gain_someG_source\tpo_B_gain_someG_coord\tpo_B_loss_allG_source\tpo_B_loss_allG_coord\tpo_B_loss_someG_source\tpo_B_loss_someG_coord\tGC_content_left\tGC_content_right\tRepeat_coord_left\tRepeat_type_left\tRepeat_coord_right\tRepeat_type_right\tGap_left\tGap_right\tSegDup_left\tSegDup_right\tENCODE_blacklist_left\tENCODE_blacklist_characteristics_left\tENCODE_blacklist_right\tENCODE_blacklist_characteristics_right\tACMG\tHI\tTS\tDDD_HI_percent\tExAC_delZ\tExAC_dupZ\tExAC_cnvZ\tExAC_synZ\tExAC_misZ\tGenCC_disease\tGenCC_moi\tGenCC_classification\tGenCC_pmid\tNCBI_gene_ID\tHGNC_gene_ID\tOMIM_ID\tOMIM_phenotype\tOMIM_inheritance\tOMIM_morbid\tOMIM_morbid_candidate\tLOEUF_bin\tGnomAD_pLI\tExAC_pLI\tAnnotSV_ranking_score\tAnnotSV_ranking_criteria\tACMG_class\n22_18894836_21464119_DEL_1\t22\t18894836\t21464119\t-2569284\tDEL\tDi George syndrom\tPathogenic\tNA\tfull\tq11.21\tDGCR6;PRODH;LOC122455341;DGCR5;FAM246C;DGCR2;DGCR11;ESS2;TSSK2;GSC2;LINC01311;SLC25A1;CLTCL1;HIRA;MRPL40;C22orf39;UFD1-AS1;UFD1;CDC45;CLDN5;LINC00895;SEPTIN5;SEPT5-GP1BB;GP1BB;TBX1;GNB1L;RTL10;TXNRD2;COMT;MIR4761;ARVCF;TANGO2;MIR185;DGCR8;MIR3618;MIR1306;TRMT2A;MIR6816;RANBP1;SNORA77B;ZDHHC8;CCDC188;LINC02891;LINC00896;RTN4R;MIR1286;DGCR6L;FAM230A;FAM247B;GGTLC3;TMEM191B;PI4KAP1;RIMBP3;FAM246B;FAM230J;FAM230G;ZNF74;SCARF2;KLHL22;MED15;POM121L4P;TMEM191A;PI4KA;SERPIND1;SNAP29;CRKL;LINC01637;AIFM3;LZTR1;THAP7;THAP7-AS1;TUBA3FP;P2RX6;SLC7A4;MIR649;P2RX6P;LRRC74B;BCRP2\tFAM230F\tLOC102724728\t78\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tABL1 (morbid/RE=mTL_miRNA);ACTN4 (morbid/RE=mTL_miRNA);ACVR2B (morbid/RE=mTL_miRNA);ADA2 (morbid/RE=ABC_enhancer);ADAR (morbid/RE=mTL_miRNA);ADH5 (morbid/RE=mTL_miRNA);AFF2 (HI=3/morbid/RE=mTL_miRNA);AGO1 (morbid/RE=mTL_miRNA);AGO2 (morbid/RE=mTL_miRNA);AHI1 (morbid/RE=mTL_miRNA);AHR (morbid/RE=mTL_miRNA);AKT1 (morbid/RE=mTL_miRNA);ALG1 (morbid/RE=mTL_miRNA);AMH (morbid/RE=mTL_miRNA);APCDD1 (morbid/RE=mTL_miRNA);AR (HI=3/morbid/RE=mTL_miRNA);ARID1A (HI=3/morbid/RE=mTL_miRNA);ASH1L (HI=3/morbid/RE=mTL_miRNA);ATM (HI=3/morbid/RE=mTL_miRNA);ATP6AP1 (morbid/RE=mTL_miRNA);ATP6V0A2 (morbid/RE=mTL_miRNA);ATP6V1E1 (morbid/RE=ABC_enhancer);ATR (morbid/RE=mTL_miRNA);B4GALT1 (morbid/RE=mTL_miRNA);BACH1 (morbid/RE=mTL_miRNA);BAP1 (HI=3/morbid/RE=mTL_miRNA);BBS5 (morbid/RE=mTL_miRNA);BCL10 (morbid/RE=mTL_miRNA);BLOC1S6 (morbid/RE=mTL_miRNA);BMPR1A (HI=3/morbid/RE=mTL_miRNA);BNC2 (morbid/RE=mTL_miRNA);BRD4 (morbid/RE=mTL_miRNA);C3 (morbid/RE=mTL_miRNA);CACNA1C (morbid/RE=mTL_miRNA);CAD (morbid/RE=mTL_miRNA);CALM3 (morbid/RE=mTL_miRNA);CAPN15 (morbid/RE=mTL_miRNA);CAPNS1 (morbid/RE=mTL_miRNA);CASP14 (morbid/RE=mTL_miRNA);CBL (morbid/RE=mTL_miRNA);CCDC134 (morbid/RE=mTL_miRNA);CCDC88A (morbid/RE=mTL_miRNA);CCND2 (morbid/RE=mTL_miRNA);CCNQ (morbid/RE=mTL_miRNA);CDC42 (morbid/RE=mTL_miRNA);CEP104 (morbid/RE=mTL_miRNA);CERS1 (morbid/RE=mTL_miRNA);CHRDL1 (HI=3/morbid/RE=mTL_miRNA);CLCC1 (morbid/RE=mTL_miRNA);CLCN7 (morbid/RE=mTL_miRNA)...\t22q11.2 recurrent (DGS/VCFS) region (proximal, A-B) (includes TBX1);Schwannomatosis\t\tCLN:906110;CLN:906111;CLN:917324;TS3:ISCA-37433;dbVar:nssv15121202;dbVar:nssv15132168;dbVar:nssv15132429;dbVar:nssv15132430;dbVar:nssv15132553;dbVar:nssv15132642;nssv15139997;dbVar:nssv15132749;dbVar:nssv15133139;dbVar:nssv15133442;dbVar:nssv15133527;dbVar:nssv15133528;dbVar:nssv15133531;dbVar:nssv15133921;dbVar:nssv15134211;dbVar:nssv15134239;dbVar:nssv15134353;dbVar:nssv15136015;dbVar:nssv15137439;dbVar:nssv15138177;dbVar:nssv15138869;dbVar:nssv15140282;dbVar:nssv15141369;dbVar:nssv15153269;dbVar:nssv15156361;dbVar:nssv15605811;dbVar:nssv15605831;dbVar:nssv15605876;dbVar:nssv15755816;dbVar:nssv16207465;dbVar:nssv16736612;dbVar:nssv16736616;dbVar:nssv18830899;dbVar:nssv18830992\t22:18894836-20311784;22:18894836-21461752;22:18894836-21464119;22:18896973-21440514;22:18900756-21075586;22:18908833-21358123;22:18909039-21440514;22:18909045-21464119;22:18912232-20287208;22:18912515-21431174;22:18916828-21050078;22:18916829-20312661;22:18916843-20311810;22:18916843-20311858;22:18916843-20312661;22:18919943-20311763;22:18919943-20659606;22:18919943-20708934;22:18919943-21440514;22:18923899-21431174;22:18937381-21459713;22:18938162-21455556;22:18950767-21455556;22:18970562-21040836;22:18973253-21435405;22:19168759-20942862;22:20895156-21374512;22:20958985-21379958;22:21044197-21440455;22:21045039-21455556;22:21065883-21440455;22:21081261-21440455;22:21086707-21445960;22:21300291-21331188;22:21344737-21344807;22:21345949-21346047;22:21348439-21348534\t22q11.2 recurrent (DGS/VCFS) region (proximal, A-B) (includes TBX1);Bernard-Soulier syndrome, type B, 231200 (3) AR;Giant platelet disorder, isolated, 231200 (3) AR;Cerebral dysgenesis, neuropathy, ichthyosis, and palmoplantar keratoderma syndrome, 609528 (3) AR;Combined D-2- and L-2-hydroxyglutaric aciduria, 615182 (3) AR;Myasthenic syndrome, congenital, 23, presynaptic, 618197 (3) AR;Conotruncal anomaly face syndrome, 217095 (3);DiGeorge syndrome, 188400 (3) AD;Tetralogy of Fallot, 187500 (3) AD;Velocardiofacial syndrome, 192430 (3) AD;DiGeorge_syndrome;Gastrointestinal defects and immunodeficiency syndrome 2, 619708 (3) AR;Polymicrogyria, perisylvian, with cerebellar hypoplasia and arthrogryposis, 616531 (3) AR;Spastic paraplegia 84, AR, 619621 (3) AR;Hyperprolinemia, type I, 239500 (3) AR;Schizophrenia, susceptibility to, 4, 600850 (3) AD;Meier-Gorlin syndrome 7, 617063 (3) AR;Metabolic encephalomyopathic crises, recurrent, with rhabdomyolysis, cardiac arrhythmias, and neurodegeneration, 616878 (3) AR;Noonan syndrome 10, 616564 (3) AD;Noonan syndrome 2, 605275 (3) AR;Schwannomatosis-2, susceptibility to, 615670 (3) AD;Recurrent_metabolic_encephalomyopathic_crises-rhabdomyolysis-cardiac_arrhythmia-intellectual_disability_syndrome|Intellectual_disability|Acute_rhabdomyolysis|Episodic_flaccid_weakness|Seizure|Cardiac_arrhythmia;Thrombophilia 10 due to heparin cofactor II deficiency, 612356 (3) AD;Van den Ende-Gupta syndrome, 600920 (3) AR\tHP:0000730;HP:0001249;HP:0001250;HP:0001267;HP:0001275;HP:0001286;HP:0001303;HP:0001656;HP:0001661;HP:0001665;HP:0001666;HP:0001687;HP:0001721;HP:0002122;HP:0002125;HP:0002182;HP:0002192;HP:0002279;HP:0002306;HP:0002316;HP:0002348;HP:0002382;HP:0002386;HP:0002391;HP:0002402;HP:0002417;HP:0002430;HP:0002431;HP:0002432;HP:0002434;HP:0002437;HP:0002458;HP:0002466;HP:0002479;HP:0002482;HP:0002499;HP:0002543;HP:0002794;HP:0003752;HP:0003767;HP:0004351;HP:0005158;HP:0006833;HP:0006997;HP:0007154;HP:0007176;HP:0007180;HP:0008942;HP:0010520;HP:0011675\tCLN:226591;CLN:2871255;CLN:959024;HI3:ISCA-37433;dbVar:nssv15119864;dbVar:nssv15120710;dbVar:nssv15124351;dbVar:nssv15124515;dbVar:nssv15129189;dbVar:nssv15130834;dbVar:nssv15130929;dbVar:nssv15131088;dbVar:nssv15131611;dbVar:nssv15132323;nssv15139981;dbVar:nssv15132334;dbVar:nssv15132747;dbVar:nssv15132748;dbVar:nssv15132933;dbVar:nssv15132934;dbVar:nssv15132935;dbVar:nssv15132939;dbVar:nssv15133099;dbVar:nssv15133185;dbVar:nssv15133186;dbVar:nssv15133443;dbVar:nssv15133817;dbVar:nssv15134350;nssv15139984;dbVar:nssv15134354;dbVar:nssv15134360;dbVar:nssv15134361;dbVar:nssv15134635;dbVar:nssv15134703;dbVar:nssv15134820;dbVar:nssv15134849;dbVar:nssv15136233;dbVar:nssv15137726;dbVar:nssv15137759;dbVar:nssv15137802;dbVar:nssv15138106;dbVar:nssv15138475;dbVar:nssv15139405;dbVar:nssv15139434;dbVar:nssv15139445;nssv15774763;dbVar:nssv15139759;dbVar:nssv15140043;dbVar:nssv15140048;dbVar:nssv15140057;dbVar:nssv15141198;dbVar:nssv15141722;dbVar:nssv15142496;dbVar:nssv15143197;dbVar:nssv15143645;dbVar:nssv15144279;dbVar:nssv15144449;dbVar:nssv15153165;dbVar:nssv15154011;dbVar:nssv15155693;dbVar:nssv15156360;dbVar:nssv15162020;dbVar:nssv15162021;dbVar:nssv15605807;dbVar:nssv15605829;dbVar:nssv15605830;nssv16216546;dbVar:nssv15605834;dbVar:nssv15755310;dbVar:nssv15755712;dbVar:nssv15755812;dbVar:nssv15770037;dbVar:nssv15770783;dbVar:nssv15770877;dbVar:nssv15772938;nssv15773614;nssv15775115;nssv15775184;nssv15775592;dbVar:nssv15772982;dbVar:nssv15775129;dbVar:nssv15776509;dbVar:nssv15776863;dbVar:nssv15776865;dbVar:nssv15776871;dbVar:nssv16208595;dbVar:nssv16208596;dbVar:nssv16212111;dbVar:nssv16213307;dbVar:nssv16213808;dbVar:nssv16214784;dbVar:nssv16215255;dbVar:nssv16215257;dbVar:nssv16216543;dbVar:nssv16216544;nssv8639845;nssv15161831;dbVar:nssv16254574;dbVar:nssv16254739;dbVar:nssv16255831;dbVar:nssv16736634;dbVar:nssv17171460;nssv17974163;dbVar:nssv17171461;dbVar:nssv17171462;dbVar:nssv17171559;dbVar:nssv17171582;dbVar:nssv17171772;dbVar:nssv17649936;dbVar:nssv17649973;dbVar:nssv17955605;dbVar:nssv17955606;dbVar:nssv17955868;dbVar:nssv17970829;dbVar:nssv17971092;dbVar:nssv17971094;dbVar:nssv17971356;dbVar:nssv17971399;dbVar:nssv17977042;dbVar:nssv18329601;dbVar:nssv18329824;dbVar:nssv18330264;dbVar:nssv18330322;dbVar:nssv18330820;dbVar:nssv18786380;dbVar:nssv18790095;dbVar:nssv18792883;dbVar:nssv18841927;nssv18830898;dbVar:nssv8639589;nssv15122532;morbid:CDC45;morbid:GP1BB;morbid:LZTR1;morbid:PI4KA;morbid:PRODH;morbid:SCARF2;morbid:SERPIND1;morbid:SLC25A1;morbid:SNAP29;morbid:TANGO2;morbid:TBX1\t22:18894836-20238206;22:18894836-20311763;22:18894836-20659606;22:18894836-21440514;22:18894836-21461752;22:18894836-21461811;22:18894836-21464119;22:18896973-20311763;22:18896973-21382953;22:18896973-21440514;22:18899288-18925066;22:18900294-18924066;22:18900295-18923806;22:18900443-21440514;22:18900669-18923820;22:18900669-19747220;22:18900669-19770565;22:18900689-21351637;22:18900896-18923882;22:18901005-21408430;22:18905110-19015451;22:18910311-18923800;22:18910311-18923820;22:18910311-19770565;22:18912232-20287208;22:18912404-21431174;22:18912871-21431174;22:18915348-21463730;22:18916828-20311858;22:18916829-20312661;22:18916829-21041014;22:18916829-21049800;22:18916843-19004772;22:18916843-20310938;22:18916843-20311858;22:18916843-20312661;22:18916843-20716903;22:18916843-20767095;22:18916843-21011216;22:18916843-21033371;22:18916843-21075592;22:18916844-20311858;22:18916844-21033401;22:18916844-21075592;22:18918742-20311922;22:18919580-21460595;22:18919943-20311763;22:18919943-20659606;22:18919943-20708934;22:18919943-21025713;22:18919943-21440514;22:18922152-21449911;22:18938162-20229017;22:18938162-20996250;22:18938162-21455556;22:18962314-21455556;22:18973253-21435405;22:18999804-21455499;22:18999804-21455556;22:19016664-21463730;22:19023802-21440455;22:19023802-21440514;22:19035018-21461811;22:19035324-21464119;22:19036287-21208284;22:19058830-21440514;22:19156118-19529130;22:19163094-19166249;22:19163624-19770565;22:19184001-21416024;22:19336599-21208828;22:19467443-19508131;22:19470352-19481849;22:19647906-21153690;22:19709401-21142058;22:19709436-19712313;22:19709952-19963280;22:19710419-21142058;22:19711062-19712294;22:19711829-19711877;22:19743227-19755855;22:19743425-19747210;22:19743425-19754400;22:19743425-19770565;22:19743474-19747220;22:19747168-19754390;22:19748301-19754857;22:19748451-19748647;22:20008633-20054687;22:20027161-20063237;22:20028564-20053554;22:20028990-20062723;22:20028993-20062955;22:20029136-20062954;22:20029701-20062756;22:20030823-20041691;22:20030823-20053554;22:20030859-20052185;22:20030879-20049206;22:20030879-20052185;22:20036383-20045782;22:20036384-20045781;22:20036385-20045784;22:20039969-20043556;22:20708891-21407690;22:20718171-21427936;22:20733496-21463730;22:20745763-21460658;22:20754408-21440515;22:20754408-21457610;22:20754423-21461752;22:20778874-20792112;22:20921343-21459713;22:21061979-21213099;22:21062169-21463730;22:21062567-21463730;22:21065883-21455556;22:21067570-21414817;22:21069074-21463730;22:21074921-21440514;22:21075576-21454721;22:21081285-21457610;22:21128401-21142008;22:21213295-21245502;22:21335907-21346541;22:21336586-21353321;22:21336662-21337398;22:21336662-21351637;22:21348908-21348985\t\t\tCLN:1349334;dbVar:nssv17974796\t22:21337344-21337343;22:21337344-21337456\t22q11.2 recurrent (DGS/VCFS) region (proximal, A-D) (includes TBX1)\t\tdbVar:nssv15161990;dbVar:nssv15139753;dbVar:nssv15150031;dbVar:nssv15150491;dbVar:nssv15146973;dbVar:nssv15135173;dbVar:nssv15137211;dbVar:nssv15129128;dbVar:nssv15161991;dbVar:nssv15161992;dbVar:nssv15164031;dbVar:nssv16254742;dbVar:nssv16297047;dbVar:nssv15151140;nssv16207460;dbVar:nssv15141953;dbVar:nssv15156366;nssv15772157;dbVar:nssv17976875;dbVar:nssv16207463;dbVar:nssv16296938;dbVar:nssv16207464;dbVar:nssv15774756;dbVar:nssv18329565;dbVar:nssv15149512;nssv15150794;dbVar:nssv15139758;dbVar:nssv15755803;dbVar:nssv15774287;dbVar:nssv15605979;dbVar:nssv15139756;dbVar:nssv15605980;dbVar:nssv15137771;dbVar:nssv15132295;dbVar:nssv15133039;dbVar:nssv15133301;dbVar:nssv15132518;dbVar:nssv15134365;dbVar:nssv15146613;dbVar:nssv15133111;dbVar:nssv15147269;dbVar:nssv15121201;dbVar:nssv15136264;dbVar:nssv15605803;dbVar:nssv15605804;dbVar:nssv16736606;dbVar:nssv15128891;dbVar:nssv15126571;dbVar:nssv15128500;dbVar:nssv16254735;dbVar:nssv15140068;dbVar:nssv15137505;dbVar:nssv15128758;dbVar:nssv15152138;dbVar:nssv15154014;dbVar:nssv15755815;dbVar:nssv15755817;dbVar:nssv16255668;dbVar:nssv18329661;dbVar:nssv18330205;dbVar:nssv15156359;dbVar:nssv15142823;dbVar:nssv15140066;dbVar:nssv15133432;dbVar:nssv15605805;dbVar:nssv15605808;dbVar:nssv15605806;dbVar:nssv15132858;dbVar:nssv15133520;dbVar:nssv15132127;dbVar:nssv15133128;dbVar:nssv15136566;dbVar:nssv15133389;dbVar:nssv15140044;dbVar:nssv15133925;dbVar:nssv15138146;dbVar:nssv15133393;nssv15139545;dbVar:nssv15135020;dbVar:nssv15132566;dbVar:nssv15164039;dbVar:nssv17955656;dbVar:nssv15132423;dbVar:nssv15132330;dbVar:nssv15126758;dbVar:nssv15127771;dbVar:nssv15126436;dbVar:nssv17649918;dbVar:nssv15162011;dbVar:nssv15125959;dbVar:nssv17955842;dbVar:nssv15139556;dbVar:nssv15122631;dbVar:nssv15123767;dbVar:nssv15162014;dbVar:nssv15143627;dbVar:nssv16865904;dbVar:nssv15123759;dbVar:nssv17650003;dbVar:nssv15755805;dbVar:nssv15132167;dbVar:nssv15133526;dbVar:nssv15162019;dbVar:nssv15145463;dbVar:nssv15145234;dbVar:nssv16207634;dbVar:nssv15605810;dbVar:nssv15605809;dbVar:nssv18842027;dbVar:nssv18842024;nssv18842046;dbVar:nssv18326316;dbVar:nssv15139749;dbVar:nssv15140369;dbVar:nssv15136643;dbVar:nssv15131931;nssv15133075;dbVar:nssv15131925;dbVar:nssv15134715;dbVar:nssv15132426;TS3:ISCA-37446;dbVar:nssv15605828;dbVar:nssv15153271;dbVar:nssv17976874;dbVar:nssv15139887;dbVar:nssv15137698;dbVar:nssv15139242;dbVar:nssv18329574;dbVar:nssv18329591;dbVar:nssv17976884;dbVar:nssv15132247;nssv15139527;dbVar:nssv15131997;nssv15139348;dbVar:nssv15137835;dbVar:nssv15132026;nssv15139977;dbVar:nssv15127741;dbVar:nssv18830785;dbVar:nssv15154013;dbVar:nssv16254573;dbVar:nssv16255670;dbVar:nssv15133914;dbVar:nssv15145464;dbVar:nssv15755306;dbVar:nssv15132169;dbVar:nssv17976883;dbVar:nssv16207466;dbVar:nssv15132044;dbVar:nssv15139694;dbVar:nssv15120579;dbVar:nssv15133646;dbVar:nssv15139596;dbVar:nssv15132083;dbVar:nssv18330192;dbVar:nssv15139716;dbVar:nssv15135998;dbVar:nssv15139748\t22:16054668-51243435;22:16054692-27296513;22:16054692-51220902;22:16054692-51237463;22:16054692-51237518;22:16087695-19010508;22:16087695-20311784;22:16114245-18917748;22:16114245-20737903;22:16114245-51195728;22:16114245-51211392;22:16197006-51224252;22:16800001-21500000;22:16888900-18916828;22:16888900-20311858;22:16888900-20312661;22:16888900-21915509;22:16888900-22290476;22:16888900-26483608;22:16888900-27657507;22:16888900-51197838;22:16888901-18916828;22:16888901-51197838;22:17012936-21431054;22:17041670-20247250;22:17055734-20312661;22:17072087-20130474;22:17264512-23238029;22:17289828-20311922;22:17397499-18984519;22:17397499-20311763;22:17397499-20659606;22:17397499-20708934;22:17397499-21505417;22:17397499-24754904;22:17397499-51178264;22:17397634-19584890;22:17397634-51178213;22:18533255-18942804;22:18570313-19184416;22:18609713-21408430;22:18611224-21408430;22:18628020-20311763;22:18628133-21712996;22:18628133-21900562;22:18628133-51244566;22:18628148-21722313;22:18637140-20289862;22:18640730-21465659;22:18641480-21917191;22:18644791-21465659;22:18645354-21465659;22:18648856-21461017;22:18648856-21927646;22:18648867-21465659;22:18648868-20311858;22:18648868-21798907;22:18649190-20311858;22:18650665-21440455;22:18650665-21440514;22:18650676-21455556;22:18650746-21460220;22:18650804-21386010;22:18650804-21460220;22:18651615-21440455;22:18652638-21914178;22:18660554-21455556;22:18661700-21505445;22:18661700-22905025;22:18661725-20311763;22:18661725-21025713;22:18661725-21440514;22:18661725-21461752;22:18661725-21505417;22:18661725-21661435;22:18661725-32217179;22:18675474-21465050;22:18687211-19060954;22:18704555-21411284;22:18706002-21440514;22:18713492-20412989;22:18713492-21712996;22:18713492-21917191;22:18841375-21465101;22:18844633-21463730;22:18848021-21468378;22:18873002-21469900;22:18874966-21028946;22:18877788-20306993;22:18877788-21462353;22:18878410-21467387;22:18886916-20278471;22:18886916-21461017;22:18886916-23421058;22:18889978-21463189;22:18890265-21464056;22:18890272-21505417;22:18890272-21561514;22:18891399-21463730;22:18891967-20311852;22:18891967-21631412;22:18892576-20306993;22:18892576-20308800;22:18892576-21460220;22:18893839-20508931;22:18893839-21416074;22:18893889-21414817;22:18894340-21032422;22:18894340-21440455;22:18894821-21505445;22:18894836-21505417;22:18894836-21561514;22:18894836-21809009;22:18909039-21798755;22:18912232-21465672;22:18912515-21922035;22:18916828-21465659;22:18916828-21804886;22:18916829-21465659;22:18916829-21465662;22:18916843-21465659;22:18916844-21798907;22:18916844-21804563;22:18917048-21465659;22:18919943-21505417;22:18919943-21561514;22:18919943-21801604;22:18919943-21809009;22:18919988-21561468;22:18936190-21464809;22:18970561-21465662;22:19024657-21465662;22:19035090-22672555;22:19058830-21561514;22:19346606-21864619;22:19819478-21464764;22:20402634-21561514;22:20732809-21465659;22:20732809-25193541;22:20748977-21499971;22:20754423-21505417;22:21022841-22712836;22:21025655-21505417;22:21025655-22336268;22:21025655-22400806;22:21029657-22485776;22:21081261-21505417;22:21261515-37583387;22:21400684-23654222\t7.30;22.85;7.31;7.30;7.30;3.96;33.54;0.82;39.86;7.32;7.32;7.34;54.67;1.08;41.40;41.41;51.11;47.57;26.78;23.86;7.49;1.08;7.49;57.40;42.19;43.53;40.40;43.01;46.89;5.65;48.62;54.10;54.78;62.54;34.92;7.61;31.55;7.61;11.71;47.16;89.81;89.86;84.15;83.29;78.51;7.88;83.04;84.41;90.95;78.43;91.08;91.10;91.25;78.36;91.21;85.21;81.56;85.23;91.25;91.25;91.30;91.31;91.08;91.31;91.28;78.78;91.62;90.35;60.55;85.87;90.14;91.61;91.67;90.35;85.65;18.95;92.10;44.45;92.97;93.09;89.33;85.66;80.20;97.92;98.08;98.05;98.94;99.08;98.81;99.34;99.24;99.43;99.69;56.67;99.81;99.82;98.25;96.18;99.87;99.80;93.79;99.84;99.84;99.91;99.94;99.96;99.96;99.98;99.98;98.42;98.42;96.35;88.17;88.42;99.94;84.78;99.94;88.20;99.94;99.94;99.94;88.38;88.21;99.94;98.40;96.31;88.29;88.06;96.31;99.97;99.94;99.94;66.78;96.11;84.09;99.96;91.60;99.79;16.39;95.23;94.50;26.11;91.39;33.45;31.88;29.84;90.26;1.24;2.81\t22q11.2 recurrent (DGS/VCFS) region (proximal, A-D) (includes TBX1)\t\tdbVar:nssv15134634;dbVar:nssv16208592;dbVar:nssv16208593;dbVar:nssv15141423;dbVar:nssv15132388;dbVar:nssv15128094;dbVar:nssv15132068;dbVar:nssv15133055;dbVar:nssv18787557;nssv18791888;dbVar:nssv16207650;dbVar:nssv15153272;dbVar:nssv15135754;dbVar:nssv15133431;nssv15139986;dbVar:nssv15125556;dbVar:nssv15126775;dbVar:nssv15133864;dbVar:nssv15755811;dbVar:nssv15755813;dbVar:nssv18326404;dbVar:nssv15126915;dbVar:nssv15128185;dbVar:nssv15145459;dbVar:nssv15145460;dbVar:nssv15138286;dbVar:nssv15154015;nssv18326430;dbVar:nssv18330227;dbVar:nssv17976889;dbVar:nssv17976891;dbVar:nssv15153273;dbVar:nssv18330460;dbVar:nssv17976888;dbVar:nssv15145461;dbVar:nssv15138328;dbVar:nssv17976880;dbVar:nssv15154017;dbVar:nssv18329577;dbVar:nssv15140316;dbVar:nssv15133433;dbVar:nssv18326382;dbVar:nssv17955872;dbVar:nssv15133434;dbVar:nssv16255835;dbVar:nssv15132708;dbVar:nssv15134184;dbVar:nssv15132128;nssv15139349;dbVar:nssv15134982;dbVar:nssv15135883;dbVar:nssv15133394;nssv16091745;dbVar:nssv15132006;nssv15139990;dbVar:nssv15137884;dbVar:nssv15133435;dbVar:nssv18792765;dbVar:nssv15135454;dbVar:nssv15133438;nssv15140028;dbVar:nssv15132230;nssv15139684;dbVar:nssv15132655;nssv15139976;dbVar:nssv15136079;dbVar:nssv15132507;nssv15139975;dbVar:nssv15132389;dbVar:nssv17976452;dbVar:nssv15164040;dbVar:nssv15137872;dbVar:nssv16254738;dbVar:nssv15127636;dbVar:nssv15128166;dbVar:nssv15127784;dbVar:nssv16208773;dbVar:nssv15145231;dbVar:nssv15145040;dbVar:nssv18786377;dbVar:nssv15145232;dbVar:nssv15139558;dbVar:nssv15163611;dbVar:nssv16215256;dbVar:nssv15128065;dbVar:nssv17955534;dbVar:nssv15163612;dbVar:nssv15145462;dbVar:nssv15145233;dbVar:nssv15163613;dbVar:nssv15132390;dbVar:nssv15163614;dbVar:nssv15162012;dbVar:nssv15139255;dbVar:nssv15162013;dbVar:nssv15162015;dbVar:nssv17976449;dbVar:nssv17955549;dbVar:nssv15162016;nssv16215222;nssv16215239;nssv16865884;dbVar:nssv15162017;dbVar:nssv15164042;dbVar:nssv15143222;dbVar:nssv15162018;dbVar:nssv16865881;dbVar:nssv15164043;dbVar:nssv15755824;dbVar:nssv17650004;dbVar:nssv17649858;dbVar:nssv16297048;dbVar:nssv17517456;dbVar:nssv15141730;dbVar:nssv15126093;dbVar:nssv15125439;dbVar:nssv15755804;dbVar:nssv15121171;dbVar:nssv15133439;dbVar:nssv15132392;dbVar:nssv15132132;dbVar:nssv15133440;dbVar:nssv15136213;dbVar:nssv15605874;nssv15605879;dbVar:nssv17976881;dbVar:nssv15119655;dbVar:nssv18842051;dbVar:nssv17173212;dbVar:nssv17173202;dbVar:nssv18792648;dbVar:nssv16091922;dbVar:nssv15143862;dbVar:nssv17976675;dbVar:nssv18830700;dbVar:nssv18786378;dbVar:nssv18786379;dbVar:nssv15140698;dbVar:nssv15139562;dbVar:nssv15140747;dbVar:nssv15140051;dbVar:nssv15133317;nssv15143213;dbVar:nssv15131926;dbVar:nssv15605919;dbVar:nssv15755810;HI3:ISCA-37446;dbVar:nssv15139269;dbVar:nssv15137499;dbVar:nssv15138712;dbVar:nssv18330193;dbVar:nssv15139855;nssv18326386;dbVar:nssv15139854;nssv15153270;dbVar:nssv15154016;nssv17976890;dbVar:nssv15152149;dbVar:nssv15137491;dbVar:nssv18330326;dbVar:nssv18329598;dbVar:nssv18330218;dbVar:nssv15141653;dbVar:nssv15142207;dbVar:nssv15755814;dbVar:nssv15132248;nssv15139690;dbVar:nssv15134351;dbVar:nssv15132463;nssv15139699;dbVar:nssv15132523;dbVar:nssv15155695;dbVar:nssv18831006;dbVar:nssv17976279;dbVar:nssv15139289;dbVar:nssv15139467;dbVar:nssv15142401;dbVar:nssv15134356;dbVar:nssv18330006;dbVar:nssv15137446;dbVar:nssv17976741;dbVar:nssv15153268;dbVar:nssv15156357;dbVar:nssv18842023;dbVar:nssv15132608;dbVar:nssv15145465;dbVar:nssv15145466;dbVar:nssv15145235;dbVar:nssv15772502;dbVar:nssv15154008;dbVar:nssv15156354;dbVar:nssv15755308;nssv15755309;dbVar:nssv15155696;dbVar:nssv18330327;dbVar:nssv18326378;dbVar:nssv18329593;dbVar:nssv18330275;dbVar:nssv18329587;dbVar:nssv18329620;dbVar:nssv17956682;dbVar:nssv15776637;dbVar:nssv17649919;dbVar:nssv18326434;dbVar:nssv18326440;dbVar:nssv15120712;dbVar:nssv15139564;dbVar:nssv16208598;dbVar:nssv15755307;dbVar:nssv15156347;dbVar:nssv18330257;dbVar:nssv15755311;dbVar:nssv17957425;dbVar:nssv15121593;dbVar:nssv15154007;dbVar:nssv15134856;dbVar:nssv18330729;dbVar:nssv18330196;dbVar:nssv17977102\t22:16087695-19363465;22:16888900-20125005;22:16888900-20730144;22:16888901-20026751;22:17019016-20718227;22:17177912-19892632;22:17397499-20311763;22:17397499-20708934;22:17565983-20052185;22:18475386-23764120;22:18626109-21800797;22:18628020-21464119;22:18628020-21505417;22:18628133-21561468;22:18628133-21883879;22:18628148-21440515;22:18631365-21800471;22:18636750-21800471;22:18639781-21910280;22:18641480-21712996;22:18641480-21722262;22:18642647-21717111;22:18642647-21742277;22:18644242-21465662;22:18644543-21465659;22:18644544-21800797;22:18644791-21798907;22:18644791-21800471;22:18644791-21915509;22:18644792-21041014;22:18645354-21800797;22:18646694-21631412;22:18648857-21465662;22:18648867-21798907;22:18648867-21800797;22:18648868-21465659;22:18650665-21440455;22:18650676-21455556;22:18655799-21726191;22:18660136-21737597;22:18660554-21455556;22:18661700-21457610;22:18661700-21505445;22:18661725-20659606;22:18661725-21440514;22:18661725-21461811;22:18661725-21464119;22:18661725-21505417;22:18661725-21561514;22:18661725-21809009;22:18671630-21536841;22:18689517-21588615;22:18706002-20311763;22:18706002-20659606;22:18706002-21025713;22:18706002-21440514;22:18706002-21464119;22:18706002-21505417;22:18706002-21809009;22:18718029-21326012;22:18728119-21811991;22:18765086-21661435;22:18765103-21661435;22:18788000-21065894;22:18788000-21468378;22:18788000-21684798;22:18789966-21591197;22:18790223-21697998;22:18820423-21477877;22:18834446-21414817;22:18834453-21575702;22:18844633-21463730;22:18844633-21608479;22:18844633-21797812;22:18848021-21468378;22:18861210-21630630;22:18861749-21463730;22:18868433-20331055;22:18868433-21477877;22:18872509-21465050;22:18874457-20306317;22:18875870-21470273;22:18875957-21466715;22:18876631-21465659;22:18878410-21465050;22:18878410-21907671;22:18884515-21484289;22:18884715-21483289;22:18886916-21463730;22:18886916-21465050;22:18886916-21467387;22:18886916-21811991;22:18889491-20312668;22:18889491-21463730;22:18889491-21466715;22:18889491-21917190;22:18889572-21464697;22:18889694-21465485;22:18889951-21466053;22:18889970-21462658;22:18890043-21440455;22:18890163-21464056;22:18890222-21561468;22:18890265-21540347;22:18890272-18999862;22:18890272-20328113;22:18890272-20659606;22:18890272-21394730;22:18890272-21461811;22:18891527-21796215;22:18892576-21460220;22:18893345-21650280;22:18893736-18924066;22:18893839-20307561;22:18893883-21563420;22:18893883-21571027;22:18893887-21386103;22:18893888-18923800;22:18893889-18973671;22:18893889-21414817;22:18893889-21481925;22:18893889-21570386;22:18894079-21414817;22:18894340-20255110;22:18894340-20255154;22:18894340-21440455;22:18894340-21440514;22:18894836-21505417;22:18894836-21561514;22:18900756-21800277;22:18912232-21465672;22:18912232-21465672;22:18916828-21465662;22:18916829-21465659;22:18916829-21465662;22:18916829-21800797;22:18916843-21465659;22:18916843-21465662;22:18916843-21798907;22:18916843-21804716;22:18916843-21804886;22:18916844-21465659;22:18916844-21800471;22:18916844-21915509;22:18917048-21465659;22:18917048-21465662;22:18919478-21800471;22:18919943-21505417;22:18919943-21505558;22:18919943-21561514;22:18919943-21809009;22:18935464-21465659;22:18936190-21464809;22:18936191-21464809;22:18970562-21465662;22:19024657-21465659;22:19024658-21465662;22:19029603-21505417;22:19046678-21465662;22:20279767-23822986;22:20310411-21804886;22:20311904-21465659;22:20311904-21800797;22:20609933-21576553;22:20659548-21561514;22:20703817-21503296;22:20703817-21631412;22:20713276-21477877;22:20716877-21465659;22:20716877-21465662;22:20716877-21798907;22:20716877-21800471;22:20716877-23819697;22:20716878-21465659;22:20725309-21465659;22:20725310-21804563;22:20725319-21800797;22:20728958-21798907;22:20728958-21800797;22:20728958-21915096;22:20729389-21465662;22:20730997-21465342;22:20732809-21465659;22:20732809-21800471;22:20733428-21505417;22:20749626-23972878;22:21029656-22481498;22:21033587-21800471;22:21049800-21465662;22:21049801-21465662;22:21059670-21800471;22:21059670-21804716;22:21065883-21937680;22:21075676-21465662;22:21081261-24593820;22:21092649-21465662;22:21188488-21804597;22:21462567-22962196\t14.31;38.01;47.78;36.07;49.29;36.76;48.62;54.78;46.55;48.58;80.93;90.59;89.29;87.59;78.92;90.52;81.07;81.21;78.56;83.65;83.40;83.57;82.89;91.06;91.07;81.40;81.46;81.42;78.55;89.57;81.42;86.08;91.21;81.56;81.51;91.21;91.25;91.30;83.68;83.49;91.62;91.66;90.35;88.33;91.61;91.67;91.68;90.35;88.60;81.63;89.67;88.62;88.24;90.33;91.86;93.09;93.15;91.78;82.80;93.22;83.31;88.71;88.71;95.31;95.86;88.69;91.72;88.36;96.68;97.66;93.73;98.08;92.96;87.00;98.05;92.77;98.73;98.19;98.46;99.10;98.58;99.03;99.17;99.24;99.33;84.82;98.83;98.87;99.69;99.66;99.57;87.84;99.62;99.79;99.69;84.86;99.77;99.75;99.74;99.81;99.81;99.82;96.18;96.95;95.84;99.68;99.74;99.82;99.82;88.45;99.91;93.19;96.37;99.93;96.24;95.97;99.96;96.83;98.81;99.96;99.28;95.99;99.97;99.96;99.96;99.98;99.98;98.42;96.35;88.41;99.94;99.94;99.94;99.94;99.94;88.33;99.94;99.94;88.38;88.21;88.20;99.94;88.34;84.95;99.94;99.94;88.33;98.40;98.40;96.31;88.06;99.94;99.97;99.97;99.94;99.94;99.94;98.33;99.94;33.43;77.20;99.87;77.39;88.37;89.20;95.10;81.96;98.20;99.79;99.79;69.06;68.96;24.08;99.79;99.79;68.46;68.70;68.71;68.59;61.98;99.79;99.83;99.79;68.50;94.65;22.17;29.92;56.14;99.63;99.63;54.60;54.29;45.68;99.60;10.90;99.59;44.74;0.10\t626\t2-hydroxyglutaric_aciduria;Abnormality_of_metabolism/homeostasis;Acute_rhabdomyolysis;Autism_spectrum_disorder;Bardet-Biedl_syndrome;Bernard_Soulier_syndrome;CEDNIK_syndrome;CLDN5-related_neurodevelopmental_disorder;CLDN5_deficiency;Cardiac_arrhythmia;Cardiovascular_phenotype;D,L-2-hydroxyglutaric_aciduria;DiGeorge_syndrome;Emery-Dreifuss_muscular_dystrophy;Episodic_flaccid_weakness;Hereditary_cancer-predisposing_syndrome;Hypertrophic_cardiomyopathy_1;Hypomyelinating_leukodystrophy_2;Inborn_genetic_diseases;Intellectual_disability;LZTR1-related_disorder;LZTR1-related_schwannomatosis;Male_infertility_with_azoospermia_or_oligozoospermia_due_to_single_gene_mutation;Meier-Gorlin_syndrome_7;Metabolic_crises_with_rhabdomyolysis,_cardiac_arrhythmias,_and_neurodegeneration;Myasthenic_syndrome,_congenital,_23,_presynaptic;Neurodevelopmental_disorder;Noonan_syndrome;Noonan_syndrome_1;Noonan_syndrome_10;Noonan_syndrome_2;Noonan_syndrome_and_Noonan-related_syndrome;PI4KA-related_disorder;Polymicrogyria,_perisylvian,_with_cerebellar_hypoplasia_and_arthrogryposis;Proline_dehydrogenase_deficiency;RASopathy;Recurrent_metabolic_encephalomyopathic_crises-rhabdomyolysis-cardiac_arrhythmia-intellectual_disability_syndrome;SLC25A1-related_disorder;Schizophrenia_4;Schwannomatosis;See_cases;Seizure;Spastic_paraplegia_84,_autosomal_recessive;TANGO2-related_disorder;TBX1-related_disorder;Thrombocytopenia;Van_den_Ende-Gupta_syndrome;Velocardiofacial_syndrome;not_specified\t\t\t\t\t\t\t\t\t\tIMH\t22:17036164-22613666\t0.1686\t\t\t22:18667571-18994853 DDD:56146;22:18877788-19033532 dgv543n27;22:18884850-18926400 gnomAD-SV_v2.1_DUP_22_50647;22:18912158-18998999 esv3647250;22:19148049-19148136 gnomAD-SV_v2.1_DUP_22_50677;22:20062642-20063204 IMH;22:20313251-20369884 DDD:56225;22:20330330-20450295 DDD:56232;22:20659548-20717455 DDD:56255;22:21033800-21039000 gnomAD-SV_v2.1_DUP_22_50819;22:21383283-21845355 esv2760719\t22:18655861-19006984 dgv99e203;22:18876429-19006125 DDD:56173;22:18882313-19012377 DDD:56174;22:18912158-18998999 1000g;22:18924000-18940000 gnomAD-SV_v2.1_DUP_22_50652;22:19702276-19702320 DDD:56203;22:20067805-20068161 DDD:56218;22:20322450-20718598 DDD:56226;22:20343574-20380608 DDD:56234;22:20705946-20718598 DDD:56260;22:21088868-21089010 DDD:56283\t\t\tchr22:18884925-18927000 dbVar;chr22:18912157-18998999 dbVar;chr22:18920358-18923595 dbVar;chr22:18934402-18934486 dbVar;chr22:18938445-18969406 dbVar;chr22:18961454-18962214 dbVar;chr22:18977575-18977640 dbVar;chr22:18977576-18977640 dbVar;chr22:18979860-18979920 dbVar;chr22:18984228-18985696 dbVar;chr22:18994879-18998062 dbVar;chr22:18997267-19009786 dbVar;chr22:19008418-19009937 dbVar;chr22:19041070-19041296 dbVar;chr22:19050181-19050386 dbVar;chr22:19063483-19063613 dbVar;22:19063767-19063900 gnomAD-SV_v2.1_DEL_22_181349;chr22:19087245-19091323 dbVar;chr22:19091546-19099675 dbVar;chr22:19099906-19100607 dbVar...\tchr22:18884924-19013000 dbVar;chr22:18902898-18902992 dbVar;chr22:18912910-18913458 dbVar;chr22:18929400-18935100 dbVar;chr22:18934999-21466000 dbVar;chr22:18943458-18943555 dbVar;chr22:18961457-18962214 dbVar;22:18977576-18977640 1000g;22:18977576-18977640 gnomAD-SV_v2.1_DEL_22_181334;chr22:18980769-18984165 dbVar;chr22:18990004-18990064 dbVar;chr22:18997195-19009720 dbVar;chr22:19006733-19006786 dbVar;chr22:19008684-19010259 dbVar;chr22:19050028-19050086 dbVar;chr22:19054635-19055096 dbVar;chr22:19063767-19063900 dbVar;chr22:19085539-19085825 dbVar;chr22:19091504-19102801 dbVar;22:19098616-19100995 dgv1286e212...\t0.445\t0.320\t22:18894850-18894969\tL1ME2z\t22:21464126-21464591\tL1MA7\t\t\t22:18889511-18912230\t\t\t\t\t\t\t1\t\t97.89\t-0.807902299547855\t-1.20830830104818\t-0.791505674827999\t2.94244265911253\t5.29477062168781\t\t\t\t\t\t\t606810;190315;603465;138720;602054;606448;116790;616830;605566;613619;600286;142360;604202;600574\t\t\tyes\tyes\t0\t1.0000e+00\t1.0000e+00\t1.9\t1A (cf Gene_count, RE_gene, +0.00);2A (cf P_loss_source, +1.00);3C (78 genes, +0.90);5F (+0.00)\t5\n22_18894836_21464119_DEL_1\t22\t18894836\t21464119\t-2569284\tDEL\tDi George syndrom\tPathogenic\tNA\tsplit\tq11.21\tDGCR6\t\t\t\tNM_005675\t6\t18893832\t18899601\t4766\t392\t59\tyes\t5\tintron2-txEnd\tCDS-3'UTR\t597\t5'\t18894835\t18899601\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tDDD:56146;DDD:56173;DDD:56174;dgv543n27;dgv99e203;gnomAD-SV_v2.1_DUP_22_50647\t22:18655861-19006984;22:18667571-18994853;22:18876429-19006125;22:18877788-19033532;22:18882313-19012377;22:18884850-18926400\t0.0355\tdbVar\tchr22:18884924-19013000;chr22:18884925-18927000\t0.01\t\t\t\tIMH\t22:17036164-22613666;22:18655109-20719124\t0.1686\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t61.1\t\t\t\t-0.678746019468492\t-0.22775445384527\t\t\t\t\t8214\tHGNC:2846\t\t\t\t\t\t9\t9.8176e-12\t7.6210e-07\t\t\tfull=5\n22_18894836_21464119_DEL_1\t22\t18894836\t21464119\t-2569284\tDEL\tDi George syndrom\tPathogenic\tNA\tsplit\tq11.21\tPRODH\t\t\t\tNM_016335\t6\t18900293\t18923806\t23513\t1803\t100\tno\t14\ttxStart-txEnd\t5'UTR-3'UTR\t\t\t18900293\t18923806\t\t\t\t\t\t\t\tdbVar:nssv17649973;dbVar:nssv17971399\t22:18900295-18923806;22:18910311-18923800\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t11\tInborn_genetic_diseases;Proline_dehydrogenase_deficiency;Schizophrenia_4\tDDD:56146;DDD:56173;DDD:56174;dgv543n27;dgv99e203;gnomAD-SV_v2.1_DUP_22_50647\t22:18655861-19006984;22:18667571-18994853;22:18876429-19006125;22:18877788-19033532;22:18882313-19012377;22:18884850-18926400\t0.0355\tdbVar\tchr22:18884924-19013000;chr22:18884925-18927000\t0.01\t\t\t\tIMH\t22:17036164-22613666;22:18655109-20719124\t0.1686\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t30\t0\t45.38\t\t\t\t0.360135634788785\t0.772811927860626\thyperprolinemia type 1\tAR\tDefinitive;Strong;Supportive\t10192398;12217952;12525555;15662599;19736351;20524212;20524212[PMID]_23462603[PMID];23462603;26978485;28202261;28851938;5031477\t5625\tHGNC:9453\t606810\tHyperprolinemia, type I, 239500 (3) AR;(Schizophrenia, susceptibility to, 4), 600850 (3) AD\tAD;AR\tyes\tyes\t6\t5.3577e-12\t4.7536e-06\t\t\tfull=5\n22_18894836_21464119_DEL_1\t22\t18894836\t21464119\t-2569284\tDEL\tDi George syndrom\tPathogenic\tNA\tsplit\tq11.21\tLOC122455341\t\t\t\tNR_173081\t1\t18926981\t18935206\t8225\t0\t0\tNA\t2\ttxStart-txEnd\tUTR\t\t\t18926981\t18935206\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t1000g;DDD:56146;DDD:56173;DDD:56174;dgv543n27;dgv99e203;esv3647250;gnomAD-SV_v2.1_DUP_22_50652\t22:18655861-19006984;22:18667571-18994853;22:18876429-19006125;22:18877788-19033532;22:18882313-19012377;22:18912158-18998999;22:18912158-18998999;22:18924000-18940000\t0.0355\tdbVar\tchr22:18884924-19013000;chr22:18912157-18998999\t0.01\t\t\t\tIMH\t22:17036164-22613666;22:18655109-20719124;22:18904624-20296851\t0.1686\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tfull=5\n22_18894836_21464119_DEL_1\t22\t18894836\t21464119\t-2569284\tDEL\tDi George syndrom\tPathogenic\tNA\tsplit\tq11.21\tDGCR5\t\t\t\tNR_110533\t2\t18957980\t19018755\t60775\t0\t0\tNA\t6\ttxStart-txEnd\tUTR\t\t\t18957980\t19018755\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tdgv543n27\t22:18877788-19033532\t0.0100\tdbVar\tchr22:18934999-21466000\t0.01\t\t\t\tIMH\t22:17036164-22613666;22:18655109-20719124;22:18904624-20296851;22:18939719-20275949;22:18954422-20259184;22:18957903-20255847\t0.4801\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t26220\tHGNC:16757\t\t\t\t\t\t\t\t\t\t\tfull=5\n22_18894836_21464119_DEL_1\t22\t18894836\t21464119\t-2569284\tDEL\tDi George syndrom\tPathogenic\tNA\tsplit\tq11.21\tFAM246C\t\t\t\tNM_001396027\t1\t19017036\t19017734\t698\t696\t100\tno\t3\ttxStart-txEnd\t5'UTR-3'UTR\t\t\t19017036\t19017734\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tdgv543n27\t22:18877788-19033532\t0.0100\tdbVar\tchr22:18934999-21466000\t0.01\t\t\t\tIMH\t22:17036164-22613666;22:18655109-20719124;22:18904624-20296851;22:18939719-20275949;22:18954422-20259184;22:18957903-20255847;22:19014638-21718005\t0.4801\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t117134596\tHGNC:54842\t\t\t\t\t\t\t\t\t\t\tfull=5\n22_18894836_21464119_DEL_1\t22\t18894836\t21464119\t-2569284\tDEL\tDi George syndrom\tPathogenic\tNA\tsplit\tq11.21\tDGCR2\t\t\t\tNM_005137\t3\t19023798\t19109925\t86127\t1653\t100\tno\t10\ttxStart-txEnd\t5'UTR-3'UTR\t\t\t19023798\t19109925\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tdbVar\tchr22:18934999-21466000\t0.01\t\t\t\tIMH\t22:17036164-22613666;22:18655109-20719124;22:18904624-20296851;22:18939719-20275949;22:18954422-20259184;22:18957903-20255847;22:19014638-21718005\t0.4801\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t39.12\t\t\t\t-0.375038933750903\t0.817637812863819\tschizophrenia\tAD\tLimited\t\t9993\tHGNC:2845\t\t\t\t\t\t4\t5.1573e-06\t1.0959e-03\t\t\tfull=5\n22_18894836_21464119_DEL_1\t22\t18894836\t21464119\t-2569284\tDEL\tDi George syndrom\tPathogenic\tNA\tsplit\tq11.21\tDGCR11\t\t\t\tNR_024157\t1\t19033674\t19035888\t2214\t0\t0\tNA\t1\ttxStart-txEnd\tUTR\t\t\t19033674\t19035888\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tdbVar\tchr22:18934999-21466000\t0.01\t\t\t\tIMH\t22:17036164-22613666;22:18655109-20719124;22:18904624-20296851;22:18939719-20275949;22:18954422-20259184;22:18957903-20255847;22:19014638-21718005\t0.4801\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t25786\tHGNC:17226\t\t\t\t\t\t\t\t\t\t\tfull=5\n22_18894836_21464119_DEL_1\t22\t18894836\t21464119\t-2569284\tDEL\tDi George syndrom\tPathogenic\tNA\tsplit\tq11.21\tESS2\t\t\t\tNM_022719\t3\t19117791\t19132164\t14373\t1431\t100\tno\t10\ttxStart-txEnd\t5'UTR-3'UTR\t\t\t19117791\t19132164\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tdbVar\tchr22:18934999-21466000\t0.01\t\t\t\tIMH\t22:17036164-22613666;22:18655109-20719124;22:18904624-20296851;22:18939719-20275949;22:18954422-20259184;22:18957903-20255847;22:19014638-21718005\t0.4801\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t8220\tHGNC:16817\t\t\t\t\t\t\t\t\t\t\tfull=5\n22_18894836_21464119_DEL_1\t22\t18894836\t21464119\t-2569284\tDEL\tDi George syndrom\tPathogenic\tNA\tsplit\tq11.21\tTSSK2\t\t\t\tNM_053006\t5\t19118820\t19120135\t1315\t1077\t88\tno\t1\ttxStart-txEnd\t5'UTR-3'UTR\t\t\t19118820\t19120135\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tdbVar\tchr22:18934999-21466000\t0.01\t\t\t\tIMH\t22:17036164-22613666;22:18655109-20719124;22:18904624-20296851;22:18939719-20275949;22:18954422-20259184;22:18957903-20255847;22:19014638-21718005\t0.4801\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t33.13\t-2.62354415217069\t-2.53125239294469\t-2.47162789907313\t-0.184731887964386\t1.02819617031079\t\t\t\t\t23617\tHGNC:11401\t\t\t\t\t\t6\t3.8610e-03\t4.1565e-03\t\t\tfull=5\n22_18894836_21464119_DEL_1\t22\t18894836\t21464119\t-2569284\tDEL\tDi George syndrom\tPathogenic\tNA\tsplit\tq11.21\tGSC2\t\t\t\tNM_005315\t2\t19134505\t19137805\t3300\t618\t100\tno\t3\ttxStart-txEnd\t5'UTR-3'UTR\t\t\t19134505\t19137805\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tdbVar\tchr22:18934999-21466000\t0.01\t\t\t\tIMH\t22:17036164-22613666;22:18655109-20719124;22:18904624-20296851;22:18939719-20275949;22:18954422-20259184;22:18957903-20255847;22:19014638-21718005\t0.4801\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t65.74\t\t\t\t1.18735715980007\t0.932740471460801\t\t\t\t\t2928\tHGNC:4613\t\t\t\t\t\t9\t4.4347e-03\t3.7186e-02\t\t\tfull=5\n22_18894836_21464119_DEL_1\t22\t18894836\t21464119\t-2569284\tDEL\tDi George syndrom\tPathogenic\tNA\tsplit\tq11.21\tLINC01311\t\t\t\tNR_103767\t1\t19159218\t19160345\t1127\t0\t0\tNA\t1\ttxStart-txEnd\tUTR\t\t\t19159218\t19160345\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tdbVar\tchr22:18934999-21466000\t0.01\t\t\t\tIMH\t22:17036164-22613666;22:18655109-20719124;22:18904624-20296851;22:18939719-20275949;22:18954422-20259184;22:18957903-20255847;22:19014638-21718005\t0.4801\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t100652736\tHGNC:50503\t\t\t\t\t\t\t\t\t\t\tfull=5\n22_18894836_21464119_DEL_1\t22\t18894836\t21464119\t-2569284\tDEL\tDi George syndrom\tPathogenic\tNA\tsplit\tq11.21\tSLC25A1\t\t\t\tNM_001256534\t2\t19163093\t19166018\t2925\t957\t100\tno\t8\ttxStart-txEnd\t5'UTR-3'UTR\t\t\t19163093\t19166018\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t9\t2-hydroxyglutaric_aciduria;D,L-2-hydroxyglutaric_aciduria;Inborn_genetic_diseases;Myasthenic_syndrome,_congenital,_23,_presynaptic;SLC25A1-related_disorder\t\t\t\tdbVar\tchr22:18934999-21466000;chr22:19161075-19192940\t0.01\t\t\t\tIMH\t22:17036164-22613666;22:18655109-20719124;22:18904624-20296851;22:18939719-20275949;22:18954422-20259184;22:18957903-20255847;22:19014638-21718005\t0.4801\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t30\t\t46.07\t-2.62354415217069\t-2.53125239294469\t-2.47162789907313\t0.459211010381399\t1.99698466418685\tD,L-2-hydroxyglutaric aciduria;mitochondrial disease;myasthenic syndrome, congenital, 23, presynaptic;presynaptic congenital myasthenic syndrome\tAD;AR\tDefinitive;Limited;Strong;Supportive\t23561848;23561848[PMID]_23393310[PMID];26273529;26870663;29238895;31527857;31808147;NULL\t6576\tHGNC:10979\t190315\tCombined D-2- and L-2-hydroxyglutaric aciduria, 615182 (3) AR;Myasthenic syndrome, congenital, 23, presynaptic, 618197 (3) AR\tAR\tyes\t\t3\t5.8829e-02\t6.3354e-01\t\t\tfull=5\n22_18894836_21464119_DEL_1\t22\t18894836\t21464119\t-2569284\tDEL\tDi George syndrom\tPathogenic\tNA\tsplit\tq11.21\tCLTCL1\t\t\t\tNM_007098\t4\t19166985\t19279242\t112257\t4923\t100\tno\t33\ttxStart-txEnd\t5'UTR-3'UTR\t\t\t19166985\t19279242\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tdbVar\tchr22:18934999-21466000\t0.01\t\t\t\tIMH\t22:17036164-22613666;22:18655109-20719124;22:18904624-20296851;22:18939719-20275949;22:18954422-20259184;22:18957903-20255847;22:19014638-21718005\t0.4801\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t72.86\t-2.62354415217069\t-2.53125239294469\t-2.47162789907313\t-0.597972033048653\t-1.19469008098196\tcongenital insensitivity to pain with severe intellectual disability;multiple congenital anomalies/dysmorphic syndrome\tAD;AR\tLimited;Supportive\t26068709[PMID]\t8218\tHGNC:2093\t\t\t\t\t\t5\t2.5101e-37\t1.2408e-26\t\t\tfull=5\n22_18894836_21464119_DEL_1\t22\t18894836\t21464119\t-2569284\tDEL\tDi George syndrom\tPathogenic\tNA\tsplit\tq11.21\tHIRA\t\t\t\tNM_003325\t4\t19318220\t19419256\t101036\t3054\t100\tno\t25\ttxStart-txEnd\t5'UTR-3'UTR\t\t\t19318220\t19419256\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tdbVar\tchr22:18934999-21466000\t0.01\t\t\t\tIMH\t22:17036164-22613666;22:18655109-20719124;22:18904624-20296851;22:18939719-20275949;22:18954422-20259184;22:18957903-20255847;22:19014638-21718005\t0.4801\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t0\t0\t19.48\t-2.51547904504873\t-2.53125239294469\t-2.47162789907313\t-0.543665561522748\t3.98018572942351\tneurodevelopmental disorder\tAD\tLimited\t33417013\t7290\tHGNC:4916\t\t\t\t\t\t0\t1.0000e+00\t1.0000e+00\t\t\tfull=5\n22_18894836_21464119_DEL_1\t22\t18894836\t21464119\t-2569284\tDEL\tDi George syndrom\tPathogenic\tNA\tsplit\tq11.21\tMRPL40\t\t\t\tNM_003776\t4\t19420067\t19423598\t3531\t621\t100\tno\t4\ttxStart-txEnd\t5'UTR-3'UTR\t\t\t19420067\t19423598\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tdbVar\tchr22:18934999-21466000\t0.01\t\t\t\tIMH\t22:17036164-22613666;22:18655109-20719124;22:18904624-20296851;22:18939719-20275949;22:18954422-20259184;22:18957903-20255847;22:19014638-21718005\t0.4801\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t54.99\t-2.62354415217069\t-2.53125239294469\t-2.47162789907313\t0.0822917398873284\t-0.450618700229176\t\t\t\t\t64976\tHGNC:14491\t\t\t\t\t\t4\t5.2924e-02\t2.0082e-02\t\t\tfull=5\n22_18894836_21464119_DEL_1\t22\t18894836\t21464119\t-2569284\tDEL\tDi George syndrom\tPathogenic\tNA\tsplit\tq11.21\tC22orf39\t\t\t\tNM_173793\t5\t19428408\t19435234\t6826\t318\t100\tno\t3\ttxStart-txEnd\t5'UTR-3'UTR\t\t\t19428408\t19435234\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tdbVar\tchr22:18934999-21466000\t0.01\t\t\t\tIMH\t22:17036164-22613666;22:18655109-20719124;22:18904624-20296851;22:18939719-20275949;22:18954422-20259184;22:18957903-20255847;22:19014638-21718005\t0.4801\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t70.45\t-2.53806827104914\t-2.53125239294469\t-2.47162789907313\t0.128056348383697\t0.836381939603491\t\t\t\t\t128977\tHGNC:27012\t\t\t\t\t\t9\t1.9976e-05\t3.6900e-07\t\t\tfull=5\n22_18894836_21464119_DEL_1\t22\t18894836\t21464119\t-2569284\tDEL\tDi George syndrom\tPathogenic\tNA\tsplit\tq11.21\tUFD1-AS1\t\t\t\tNR_186687\t1\t19434956\t19439211\t4255\t0\t0\tNA\t2\ttxStart-txEnd\tUTR\t\t\t19434956\t19439211\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tdbVar\tchr22:18934999-21466000\t0.01\t\t\t\tIMH\t22:17036164-22613666;22:18655109-20719124;22:18904624-20296851;22:18939719-20275949;22:18954422-20259184;22:18957903-20255847;22:19014638-21718005\t0.4801\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t105372860\tHGNC:55917\t\t\t\t\t\t\t\t\t\t\tfull=5\n22_18894836_21464119_DEL_1\t22\t18894836\t21464119\t-2569284\tDEL\tDi George syndrom\tPathogenic\tNA\tsplit\tq11.21\tUFD1\t\t\t\tNM_005659\t7\t19437433\t19466716\t29283\t924\t100\tno\t12\ttxStart-txEnd\t5'UTR-3'UTR\t\t\t19437433\t19466716\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tdbVar\tchr22:18934999-21466000\t0.01\t\t\t\tIMH\t22:17036164-22613666;22:18655109-20719124;22:18904624-20296851;22:18939719-20275949;22:18954422-20259184;22:18957903-20255847;22:19014638-21718005\t0.4801\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t7353\tHGNC:12520\t\t\t\t\t\t\t\t\t\t\tfull=5\n22_18894836_21464119_DEL_1\t22\t18894836\t21464119\t-2569284\tDEL\tDi George syndrom\tPathogenic\tNA\tsplit\tq11.21\tCDC45\t\t\t\tNM_001178010\t2\t19467348\t19508135\t40787\t1797\t100\tno\t20\ttxStart-txEnd\t5'UTR-3'UTR\t\t\t19467348\t19508135\t\t\t\t\t\tMeier-Gorlin syndrome 7, 617063 (3) AR\t\tdbVar:nssv15124515;morbid:CDC45\t22:19467443-19508131;22:19470352-19481849\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t10\tMeier-Gorlin_syndrome_7\t\t\t\tdbVar\tchr22:18934999-21466000\t0.01\t\t\t\tIMH\t22:17036164-22613666;22:18655109-20719124;22:18904624-20296851;22:18939719-20275949;22:18954422-20259184;22:18957903-20255847;22:19014638-21718005\t0.4801\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t8.4\t-2.57292784443109\t-2.53125239294469\t-2.47162789907313\t0.554183575869215\t1.2901097836858\tMeier-Gorlin syndrome;Meier-Gorlin syndrome 7\tAD;AR\tDefinitive;Strong;Supportive\t11416137;121376;149250;27374770;27374770[PMID];282832;30986546\t8318\tHGNC:1739\t603465\tMeier-Gorlin syndrome 7, 617063 (3) AR\tAR\tyes\t\t3\t4.6237e-05\t6.9104e-02\t\t\tfull=5\n22_18894836_21464119_DEL_1\t22\t18894836\t21464119\t-2569284\tDEL\tDi George syndrom\tPathogenic\tNA\tsplit\tq11.21\tCLDN5\t\t\t\tNM_001130861\t1\t19510546\t19512860\t2314\t912\t52\tno\t1\ttxStart-txEnd\t5'UTR-3'UTR\t\t\t19510546\t19512860\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t3\tCLDN5-related_neurodevelopmental_disorder;CLDN5_deficiency;Neurodevelopmental_disorder\t\t\t\tdbVar\tchr22:18934999-21466000\t0.01\t\t\t\tIMH\t22:17036164-22613666;22:18655109-20719124;22:18904624-20296851;22:18939719-20275949;22:18954422-20259184;22:18957903-20255847;22:19014638-21718005\t0.4801\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t50.93\t\t\t\t2.94244265911253\t3.34022892264706\tneurodevelopmental disorder\tAD\tLimited\t35714222;36477332\t7122\tHGNC:2047\t\t\t\t\t\t1\t8.9512e-01\t7.4052e-01\t\t\tfull=5\n22_18894836_21464119_DEL_1\t22\t18894836\t21464119\t-2569284\tDEL\tDi George syndrom\tPathogenic\tNA\tsplit\tq11.21\tLINC00895\t\t\t\tNR_024381\t1\t19553652\t19554362\t710\t0\t0\tNA\t1\ttxStart-txEnd\tUTR\t\t\t19553652\t19554362\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tdbVar\tchr22:18934999-21466000;chr22:19528613-19558447;chr22:19531786-19559055\t0.01\t\t\t\tIMH\t22:17036164-22613666;22:18655109-20719124;22:18904624-20296851;22:18939719-20275949;22:18954422-20259184;22:18957903-20255847;22:19014638-21718005\t0.4801\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t150185\tHGNC:48580\t\t\t\t\t\t\t\t\t\t\tfull=5\n22_18894836_21464119_DEL_1\t22\t18894836\t21464119\t-2569284\tDEL\tDi George syndrom\tPathogenic\tNA\tsplit\tq11.21\tSEPTIN5\t\t\t\tNM_002688\t6\t19702025\t19710842\t8817\t1110\t100\tno\t12\ttxStart-txEnd\t5'UTR-3'UTR\t\t\t19702025\t19710842\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tdbVar\tchr22:18934999-21466000\t0.01\t\t\t\tIMH\t22:17036164-22613666;22:18655109-20719124;22:18904624-20296851;22:18939719-20275949;22:18954422-20259184;22:18957903-20255847;22:19014638-21718005\t0.4801\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t5413\tHGNC:9164\t\t\t\t\t\t\t\t\t\t\tfull=5\n22_18894836_21464119_DEL_1\t22\t18894836\t21464119\t-2569284\tDEL\tDi George syndrom\tPathogenic\tNA\tsplit\tq11.21\tSEPT5-GP1BB\t\t\t\tNR_037611\t1\t19704742\t19712297\t7555\t0\t0\tNA\t12\ttxStart-txEnd\tUTR\t\t\t19704742\t19712297\t\t\t\t\t\tBernard-Soulier syndrome, type B, 231200 (3) AR;Giant platelet disorder, isolated, 231200 (3) AR\t\tdbVar:nssv17977042;morbid:GP1BB\t22:19711062-19712294;22:19711829-19711877\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t8\tBernard_Soulier_syndrome;Thrombocytopenia\t\t\t\tdbVar\tchr22:18934999-21466000\t0.01\t\t\t\tIMH\t22:17036164-22613666;22:18655109-20719124;22:18904624-20296851;22:18939719-20275949;22:18954422-20259184;22:18957903-20255847;22:19014638-21718005\t0.4801\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tfull=5\n22_18894836_21464119_DEL_1\t22\t18894836\t21464119\t-2569284\tDEL\tDi George syndrom\tPathogenic\tNA\tsplit\tq11.21\tGP1BB\t\t\t\tNM_000407\t5\t19711061\t19712294\t1233\t621\t100\tno\t2\ttxStart-txEnd\t5'UTR-3'UTR\t\t\t19711061\t19712294\t\t\t\t\t\tBernard-Soulier syndrome, type B, 231200 (3) AR;Giant platelet disorder, isolated, 231200 (3) AR\t\tdbVar:nssv17977042;morbid:GP1BB\t22:19711062-19712294;22:19711829-19711877\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t8\tBernard_Soulier_syndrome;Thrombocytopenia\t\t\t\tdbVar\tchr22:18934999-21466000\t0.01\t\t\t\tIMH\t22:17036164-22613666;22:18655109-20719124;22:18904624-20296851;22:18939719-20275949;22:18954422-20259184;22:18957903-20255847;22:19014638-21718005\t0.4801\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t30\t\t78.01\t\t\t\t-0.00224146961144303\t0.855158778511627\tBernard-Soulier syndrome;autosomal dominant macrothrombocytopenia\tAD;AR\tDefinitive;Strong;Supportive\t10887115;12447957;15213102;18825380;19484238;22886561[PMID];23995613;28064200[PMID]\t2812\tHGNC:4440\t138720\tBernard-Soulier syndrome, type B, 231200 (3) AR;Giant platelet disorder, isolated, 231200 (3) AR\tAR\tyes\t\t7\t5.1249e-01\t1.0112e-01\t\t\tfull=5\n22_18894836_21464119_DEL_1\t22\t18894836\t21464119\t-2569284\tDEL\tDi George syndrom\tPathogenic\tNA\tsplit\tq11.21\tTBX1\t\t\t\tNM_001379200\t1\t19748300\t19754857\t6557\t1515\t100\tno\t7\ttxStart-txEnd\t5'UTR-3'UTR\t\t\t19748300\t19754857\t\t\t\t\t\tConotruncal anomaly face syndrome, 217095 (3);DiGeorge syndrome, 188400 (3) AD;Tetralogy of Fallot, 187500 (3) AD;Velocardiofacial syndrome, 192430 (3) AD;DiGeorge_syndrome\t\tCLN:959024;morbid:TBX1\t22:19748301-19754857;22:19748451-19748647\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t27\tDiGeorge_syndrome;Inborn_genetic_diseases;TBX1-related_disorder;Velocardiofacial_syndrome\t\t\t\tdbVar\tchr22:18934999-21466000\t0.01\t\t\t\tIMH\t22:17036164-22613666;22:18655109-20719124;22:18904624-20296851;22:18939719-20275949;22:18954422-20259184;22:18957903-20255847;22:19014638-21718005\t0.4801\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t1\t0\t4.92\t-2.62354415217069\t-2.53125239294469\t-2.47162789907313\t2.36782594176173\t3.38001100960461\t22q11.2 deletion syndrome;conotruncal heart malformations;velocardiofacial syndrome\tAD\tDefinitive;Strong;Supportive\t11239417;11242049;11242110;11748311;14585638;14585638[PMID];18636631;192430;20054531;20937753;24637876;24998776;25860641;29500247\t6899\tHGNC:11592\t602054\tConotruncal anomaly face syndrome, 217095 (3);DiGeorge syndrome, 188400 (3) AD;Tetralogy of Fallot, 187500 (3) AD;Velocardiofacial syndrome, 192430 (3) AD\tAD\tyes\t\t2\t8.3661e-01\t9.8340e-01\t\t\tfull=5\n22_18894836_21464119_DEL_1\t22\t18894836\t21464119\t-2569284\tDEL\tDi George syndrom\tPathogenic\tNA\tsplit\tq11.21\tGNB1L\t\t\t\tNM_053004\t3\t19770745\t19842397\t71652\t984\t100\tno\t8\ttxStart-txEnd\t5'UTR-3'UTR\t\t\t19770745\t19842397\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tdbVar\tchr22:18934999-21466000\t0.01\t\t\t\tIMH\t22:17036164-22613666;22:18655109-20719124;22:18904624-20296851;22:18939719-20275949;22:18954422-20259184;22:18957903-20255847;22:19014638-21718005\t0.4801\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t48.57\t-2.62354415217069\t-2.53125239294469\t-2.47162789907313\t-0.373621593221624\t0.590344002361273\t\t\t\t\t54584\tHGNC:4397\t\t\t\t\t\t5\t4.7419e-05\t1.2635e-03\t\t\tfull=5\n22_18894836_21464119_DEL_1\t22\t18894836\t21464119\t-2569284\tDEL\tDi George syndrom\tPathogenic\tNA\tsplit\tq11.21\tRTL10\t\t\t\tNM_024627\t6\t19833668\t19842397\t8729\t1095\t82\tno\t3\ttxStart-txEnd\t5'UTR-3'UTR\t\t\t19833668\t19842397\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tdbVar\tchr22:18934999-21466000\t0.01\t\t\t\tIMH\t22:17036164-22613666;22:18655109-20719124;22:18904624-20296851;22:18939719-20275949;22:18954422-20259184;22:18957903-20255847;22:19014638-21718005\t0.4801\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t79680\tHGNC:26112\t\t\t\t\t\t\t\t\t\t\tfull=5\n22_18894836_21464119_DEL_1\t22\t18894836\t21464119\t-2569284\tDEL\tDi George syndrom\tPathogenic\tNA\tsplit\tq11.21\tTXNRD2\t\t\t\tNM_006440\t5\t19863044\t19929341\t66297\t1575\t100\tno\t18\ttxStart-txEnd\t5'UTR-3'UTR\t\t\t19863044\t19929341\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tdbVar\tchr22:18934999-21466000\t0.01\t\t\t\tIMH\t22:17036164-22613666;22:18655109-20719124;22:18904624-20296851;22:18939719-20275949;22:18954422-20259184;22:18957903-20255847;22:19014638-21718005\t0.4801\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t72.21\t-2.62354415217069\t-2.53125239294469\t-2.47162789907313\t0.348188483468328\t0.327140414338646\tdilated cardiomyopathy;familial glucocorticoid deficiency;familial isolated dilated cardiomyopathy;glucocorticoid deficiency 5\tAD;AR\tLimited;Supportive\t21247928[PMID];24601690[PMID];30237576;32476818\t10587\tHGNC:18155\t606448\t?Glucocorticoid deficiency 5, 617825 (3) AR\tAR\t\tyes\t5\t3.4688e-11\t1.0692e-08\t\t\tfull=5\n22_18894836_21464119_DEL_1\t22\t18894836\t21464119\t-2569284\tDEL\tDi George syndrom\tPathogenic\tNA\tsplit\tq11.21\tCOMT\t\t\t\tNM_000754\t4\t19929294\t19957498\t28204\t816\t100\tno\t6\ttxStart-txEnd\t5'UTR-3'UTR\t\t\t19929294\t19957498\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t1\tBardet-Biedl_syndrome\t\t\t\tdbVar\tchr22:18934999-21466000\t0.01\t\t\t\tIMH\t22:17036164-22613666;22:18655109-20719124;22:18904624-20296851;22:18939719-20275949;22:18954422-20259184;22:18957903-20255847;22:19014638-21718005\t0.4801\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t40.8\t-2.62354415217069\t-2.53125239294469\t-2.47162789907313\t0.465852147917107\t0.557839148920189\tparoxysmal dyskinesia\tAD\tModerate\t\t1312\tHGNC:2228\t116790\t(Panic disorder, susceptibility to), 167870 (3) ?AD;(Schizophrenia, susceptibility to), 181500 (3) AD\t?AD;AD\t\tyes\t8\t1.1377e-06\t8.4666e-04\t\t\tfull=5\n22_18894836_21464119_DEL_1\t22\t18894836\t21464119\t-2569284\tDEL\tDi George syndrom\tPathogenic\tNA\tsplit\tq11.21\tMIR4761\t\t\t\tNR_039918\t1\t19951275\t19951357\t82\t0\t0\tNA\t1\ttxStart-txEnd\tUTR\t\t\t19951275\t19951357\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tdbVar\tchr22:18934999-21466000\t0.01\t\t\t\tIMH\t22:17036164-22613666;22:18655109-20719124;22:18904624-20296851;22:18939719-20275949;22:18954422-20259184;22:18957903-20255847;22:19014638-21718005\t0.4801\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t100616414\tHGNC:41591\t\t\t\t\t\t\t\t\t\t\tfull=5\n22_18894836_21464119_DEL_1\t22\t18894836\t21464119\t-2569284\tDEL\tDi George syndrom\tPathogenic\tNA\tsplit\tq11.21\tARVCF\t\t\t\tNM_001670\t3\t19957418\t20004346\t46928\t2889\t100\tno\t20\ttxStart-txEnd\t5'UTR-3'UTR\t\t\t19957418\t20004346\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tdbVar\tchr22:18934999-21466000\t0.01\t\t\t\tIMH\t22:17036164-22613666;22:18655109-20719124;22:18904624-20296851;22:18939719-20275949;22:18954422-20259184;22:18957903-20255847;22:19014638-21718005\t0.4801\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t54.56\t-2.62354415217069\t-2.53125239294469\t-2.47162789907313\t0.425870777992255\t-0.701931719398633\t\t\t\t\t421\tHGNC:728\t\t\t\t\t\t4\t5.0422e-11\t8.2184e-07\t\t\tfull=5\n22_18894836_21464119_DEL_1\t22\t18894836\t21464119\t-2569284\tDEL\tDi George syndrom\tPathogenic\tNA\tsplit\tq11.21\tTANGO2\t\t\t\tNM_001322141\t2\t20008632\t20054687\t46055\t1110\t100\tno\t9\ttxStart-txEnd\t5'UTR-3'UTR\t\t\t20008632\t20054687\t\t\t\t\t\tMetabolic encephalomyopathic crises, recurrent, with rhabdomyolysis, cardiac arrhythmias, and neurodegeneration, 616878 (3) AR;Recurrent_metabolic_encephalomyopathic_crises-rhabdomyolysis-cardiac_arrhythmia-intellectual_disability_syndrome|Intellectual_disability|Acute_rhabdomyolysis|Episodic_flaccid_weakness|Seizure|Cardiac_arrhythmia\tHP:0000730;HP:0001249;HP:0001250;HP:0001267;HP:0001275;HP:0001286;HP:0001303;HP:0001656;HP:0001661;HP:0001665;HP:0001666;HP:0001687;HP:0001721;HP:0002122;HP:0002125;HP:0002182;HP:0002192;HP:0002279;HP:0002306;HP:0002316;HP:0002348;HP:0002382;HP:0002386;HP:0002391;HP:0002402;HP:0002417;HP:0002430;HP:0002431;HP:0002432;HP:0002434;HP:0002437;HP:0002458;HP:0002466;HP:0002479;HP:0002482;HP:0002499;HP:0002543;HP:0002794;HP:0003752;HP:0003767;HP:0004351;HP:0005158;HP:0006833;HP:0006997;HP:0007154;HP:0007176;HP:0007180;HP:0008942;HP:0010520;HP:0011675\tCLN:226591;dbVar:nssv15770877;dbVar:nssv15772938;nssv15773614;nssv15775115;nssv15775184;nssv15775592;dbVar:nssv15772982;dbVar:nssv15775129;dbVar:nssv16216543;dbVar:nssv17171772;dbVar:nssv17971094;dbVar:nssv18790095;dbVar:nssv8639589;nssv15122532;morbid:TANGO2\t22:20008633-20054687;22:20028564-20053554;22:20030823-20041691;22:20030823-20053554;22:20030859-20052185;22:20030879-20049206;22:20030879-20052185;22:20036383-20045782;22:20036384-20045781;22:20036385-20045784;22:20039969-20043556\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t27\tAbnormality_of_metabolism/homeostasis;Acute_rhabdomyolysis;Cardiac_arrhythmia;Episodic_flaccid_weakness;Inborn_genetic_diseases;Intellectual_disability;Metabolic_crises_with_rhabdomyolysis,_cardiac_arrhythmias,_and_neurodegeneration;Recurrent_metabolic_encephalomyopathic_crises-rhabdomyolysis-cardiac_arrhythmia-intellectual_disability_syndrome;Seizure;TANGO2-related_disorder\t\t\t\tdbVar\tchr22:18934999-21466000\t0.01\t\t\t\tIMH\t22:17036164-22613666;22:18655109-20719124;22:18904624-20296851;22:18939719-20275949;22:18954422-20259184;22:18957903-20255847;22:19014638-21718005\t0.4801\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t51.91\t-2.62354415217069\t-2.53125239294469\t-2.47162789907313\t1.46130508236304\t0.279301120222081\tmetabolic encephalomyopathic crises, recurrent, with rhabdomyolysis, cardiac arrhythmias, and neurodegeneration;recurrent metabolic encephalomyopathic crises-rhabdomyolysis-cardiac arrhythmia-intellectual disability syndrome\tAR\tModerate;Strong\t26805781;26805782\t128989\tHGNC:25439\t616830\tMetabolic encephalomyopathic crises, recurrent, with rhabdomyolysis, cardiac arrhythmias, and neurodegeneration, 616878 (3) AR\tAR\tyes\t\t4\t1.4769e-04\t4.2224e-06\t\t\tfull=5\n22_18894836_21464119_DEL_1\t22\t18894836\t21464119\t-2569284\tDEL\tDi George syndrom\tPathogenic\tNA\tsplit\tq11.21\tMIR185\t\t\t\tNR_029706\t1\t20020661\t20020743\t82\t0\t0\tNA\t1\ttxStart-txEnd\tUTR\t\t\t20020661\t20020743\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tdbVar\tchr22:18934999-21466000\t0.01\t\t\t\tIMH\t22:17036164-22613666;22:18655109-20719124;22:18904624-20296851;22:18939719-20275949;22:18954422-20259184;22:18957903-20255847;22:19014638-21718005\t0.4801\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t406961\tHGNC:31556\t\t\t\t\t\t\t\t\t\t\tfull=5\n22_18894836_21464119_DEL_1\t22\t18894836\t21464119\t-2569284\tDEL\tDi George syndrom\tPathogenic\tNA\tsplit\tq11.21\tDGCR8\t\t\t\tNM_022720\t7\t20067763\t20099395\t31632\t2322\t100\tno\t14\ttxStart-txEnd\t5'UTR-3'UTR\t\t\t20067763\t20099395\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tdbVar\tchr22:18934999-21466000\t0.01\t\t\t\tIMH\t22:17036164-22613666;22:18655109-20719124;22:18904624-20296851;22:18939719-20275949;22:18954422-20259184;22:18957903-20255847;22:19014638-21718005\t0.4801\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t5.07\t-2.46581011772843\t-2.53125239294469\t-2.47162789907313\t0.690563071344625\t4.03153091509844\t\t\t\t\t54487\tHGNC:2847\t\t\t\t\t\t0\t9.9973e-01\t9.9990e-01\t\t\tfull=5\n22_18894836_21464119_DEL_1\t22\t18894836\t21464119\t-2569284\tDEL\tDi George syndrom\tPathogenic\tNA\tsplit\tq11.21\tMIR3618\t\t\t\tNR_037412\t1\t20073268\t20073356\t88\t0\t0\tNA\t1\ttxStart-txEnd\tUTR\t\t\t20073268\t20073356\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tdbVar\tchr22:18934999-21466000\t0.01\t\t\t\tIMH\t22:17036164-22613666;22:18655109-20719124;22:18904624-20296851;22:18939719-20275949;22:18954422-20259184;22:18957903-20255847;22:19014638-21718005\t0.4801\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t100500860\tHGNC:38937\t\t\t\t\t\t\t\t\t\t\tfull=5\n22_18894836_21464119_DEL_1\t22\t18894836\t21464119\t-2569284\tDEL\tDi George syndrom\tPathogenic\tNA\tsplit\tq11.21\tMIR1306\t\t\t\tNR_031706\t1\t20073580\t20073665\t85\t0\t0\tNA\t1\ttxStart-txEnd\tUTR\t\t\t20073580\t20073665\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tdbVar\tchr22:18934999-21466000\t0.01\t\t\t\tIMH\t22:17036164-22613666;22:18655109-20719124;22:18904624-20296851;22:18939719-20275949;22:18954422-20259184;22:18957903-20255847;22:19014638-21718005\t0.4801\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t100302197\tHGNC:35371\t\t\t\t\t\t\t\t\t\t\tfull=5\n22_18894836_21464119_DEL_1\t22\t18894836\t21464119\t-2569284\tDEL\tDi George syndrom\tPathogenic\tNA\tsplit\tq11.21\tTRMT2A\t\t\t\tNM_001331039\t2\t20099397\t20104749\t5352\t1932\t100\tno\t12\ttxStart-txEnd\t5'UTR-3'UTR\t\t\t20099397\t20104749\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tdbVar\tchr22:18934999-21466000\t0.01\t\t\t\tIMH\t22:17036164-22613666;22:18655109-20719124;22:18904624-20296851;22:18939719-20275949;22:18954422-20259184;22:18957903-20255847;22:19014638-21718005\t0.4801\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t68.23\t-2.62354415217069\t-2.53125239294469\t-2.47162789907313\t-1.98609532754524\t-0.363927890852326\t\t\t\t\t27037\tHGNC:24974\t\t\t\t\t\t5\t1.0841e-08\t1.3059e-05\t\t\tfull=5\n22_18894836_21464119_DEL_1\t22\t18894836\t21464119\t-2569284\tDEL\tDi George syndrom\tPathogenic\tNA\tsplit\tq11.21\tMIR6816\t\t\t\tNR_106874\t1\t20102208\t20102274\t66\t0\t0\tNA\t1\ttxStart-txEnd\tUTR\t\t\t20102208\t20102274\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tdbVar\tchr22:18934999-21466000\t0.01\t\t\t\tIMH\t22:17036164-22613666;22:18655109-20719124;22:18904624-20296851;22:18939719-20275949;22:18954422-20259184;22:18957903-20255847;22:19014638-21718005\t0.4801\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t102465490\tHGNC:50256\t\t\t\t\t\t\t\t\t\t\tfull=5\n22_18894836_21464119_DEL_1\t22\t18894836\t21464119\t-2569284\tDEL\tDi George syndrom\tPathogenic\tNA\tsplit\tq11.21\tRANBP1\t\t\t\tNM_001278639\t2\t20103626\t20114878\t11252\t837\t100\tno\t6\ttxStart-txEnd\t5'UTR-3'UTR\t\t\t20103626\t20114878\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tdbVar\tchr22:18934999-21466000\t0.01\t\t\t\tIMH\t22:17036164-22613666;22:18655109-20719124;22:18904624-20296851;22:18939719-20275949;22:18954422-20259184;22:18957903-20255847;22:19014638-21718005\t0.4801\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t8.76\t-2.62354415217069\t-2.53125239294469\t-2.47162789907313\t-1.04492215962902\t2.06932219421127\t\t\t\t\t5902\tHGNC:9847\t\t\t\t\t\t2\t8.2235e-01\t3.3622e-01\t\t\tfull=5\n22_18894836_21464119_DEL_1\t22\t18894836\t21464119\t-2569284\tDEL\tDi George syndrom\tPathogenic\tNA\tsplit\tq11.21\tSNORA77B\t\t\t\tNR_145765\t1\t20113924\t20114049\t125\t0\t0\tNA\t1\ttxStart-txEnd\tUTR\t\t\t20113924\t20114049\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tdbVar\tchr22:18934999-21466000\t0.01\t\t\t\tIMH\t22:17036164-22613666;22:18655109-20719124;22:18904624-20296851;22:18939719-20275949;22:18954422-20259184;22:18957903-20255847;22:19014638-21718005\t0.4801\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t109617010\tHGNC:52221\t\t\t\t\t\t\t\t\t\t\tfull=5\n22_18894836_21464119_DEL_1\t22\t18894836\t21464119\t-2569284\tDEL\tDi George syndrom\tPathogenic\tNA\tsplit\tq11.21\tZDHHC8\t\t\t\tNM_001185024\t2\t20119326\t20135530\t16204\t2337\t100\tno\t11\ttxStart-txEnd\t5'UTR-3'UTR\t\t\t20119326\t20135530\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tdbVar\tchr22:18934999-21466000\t0.01\t\t\t\tIMH\t22:17036164-22613666;22:18655109-20719124;22:18904624-20296851;22:18939719-20275949;22:18954422-20259184;22:18957903-20255847;22:19014638-21718005\t0.4801\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t37.82\t-2.62354415217069\t-2.53125239294469\t-2.47162789907313\t-0.408428770523539\t2.39258092860216\t\t\t\t\t29801\tHGNC:18474\t\t\t\t\t\t1\t8.5288e-01\t9.8899e-01\t\t\tfull=5\n22_18894836_21464119_DEL_1\t22\t18894836\t21464119\t-2569284\tDEL\tDi George syndrom\tPathogenic\tNA\tsplit\tq11.21\tCCDC188\t\t\t\tNM_001365892\t2\t20135938\t20138578\t2640\t1209\t100\tno\t9\ttxStart-txEnd\t5'UTR-3'UTR\t\t\t20135938\t20138578\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tdbVar\tchr22:18934999-21466000\t0.01\t\t\t\tIMH\t22:17036164-22613666;22:18655109-20719124;22:18904624-20296851;22:18939719-20275949;22:18954422-20259184;22:18957903-20255847;22:19014638-21718005\t0.4801\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t388849\tHGNC:51899\t\t\t\t\t\t\t\t\t\t\tfull=5\n22_18894836_21464119_DEL_1\t22\t18894836\t21464119\t-2569284\tDEL\tDi George syndrom\tPathogenic\tNA\tsplit\tq11.21\tLINC02891\t\t\t\tNR_038460\t2\t20186251\t20192441\t6190\t0\t0\tNA\t4\ttxStart-txEnd\tUTR\t\t\t20186251\t20192441\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tdbVar\tchr22:18934999-21466000\t0.01\t\t\t\tIMH\t22:17036164-22613666;22:18655109-20719124;22:18904624-20296851;22:18939719-20275949;22:18954422-20259184;22:18957903-20255847;22:19014638-21718005\t0.4801\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t284865\tHGNC:55221\t\t\t\t\t\t\t\t\t\t\tfull=5\n22_18894836_21464119_DEL_1\t22\t18894836\t21464119\t-2569284\tDEL\tDi George syndrom\tPathogenic\tNA\tsplit\tq11.21\tLINC00896\t\t\t\tNR_026919\t1\t20193854\t20196060\t2206\t0\t0\tNA\t1\ttxStart-txEnd\tUTR\t\t\t20193854\t20196060\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tdbVar\tchr22:18934999-21466000\t0.01\t\t\t\tIMH\t22:17036164-22613666;22:18655109-20719124;22:18904624-20296851;22:18939719-20275949;22:18954422-20259184;22:18957903-20255847;22:19014638-21718005\t0.4801\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t150197\tHGNC:26519\t\t\t\t\t\t\t\t\t\t\tfull=5\n22_18894836_21464119_DEL_1\t22\t18894836\t21464119\t-2569284\tDEL\tDi George syndrom\tPathogenic\tNA\tsplit\tq11.21\tRTN4R\t\t\t\tNM_023004\t6\t20228937\t20255841\t26904\t1422\t100\tno\t2\ttxStart-txEnd\t5'UTR-3'UTR\t\t\t20228937\t20255841\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tdbVar\tchr22:18934999-21466000\t0.01\t\t\t\tIMH\t22:17036164-22613666;22:18655109-20719124;22:18904624-20296851;22:18939719-20275949;22:18954422-20259184;22:18957903-20255847;22:19014638-21718005\t0.4801\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t35.77\t\t\t\t-0.800223805913347\t1.18081437151802\t\t\t\t\t65078\tHGNC:18601\t605566\t(Schizophrenia, susceptibility to), 181500 (3) AD\tAD\t\tyes\t1\t9.5882e-01\t5.2644e-01\t\t\tfull=5\n22_18894836_21464119_DEL_1\t22\t18894836\t21464119\t-2569284\tDEL\tDi George syndrom\tPathogenic\tNA\tsplit\tq11.21\tMIR1286\t\t\t\tNR_031618\t1\t20236656\t20236734\t78\t0\t0\tNA\t1\ttxStart-txEnd\tUTR\t\t\t20236656\t20236734\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tdbVar\tchr22:18934999-21466000\t0.01\t\t\t\tIMH\t22:17036164-22613666;22:18655109-20719124;22:18904624-20296851;22:18939719-20275949;22:18954422-20259184;22:18957903-20255847;22:19014638-21718005\t0.4801\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t100302118\tHGNC:35279\t\t\t\t\t\t\t\t\t\t\tfull=5\n22_18894836_21464119_DEL_1\t22\t18894836\t21464119\t-2569284\tDEL\tDi George syndrom\tPathogenic\tNA\tsplit\tq11.21\tDGCR6L\t\t\t\tNM_033257\t4\t20301760\t20307583\t5823\t663\t100\tno\t5\ttxStart-txEnd\t5'UTR-3'UTR\t\t\t20301760\t20307583\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tdbVar\tchr22:18934999-21466000\t0.01\t\t\t\tIMH\t22:17036164-22613666;22:18655109-20719124;22:19014638-21718005\t0.1686\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t79.33\t\t\t\t0.698499439551705\t0.174075190759776\t\t\t\t\t85359\tHGNC:18551\t\t\t\t\t\t7\t5.0636e-05\t1.2857e-01\t\t\tfull=5\n22_18894836_21464119_DEL_1\t22\t18894836\t21464119\t-2569284\tDEL\tDi George syndrom\tPathogenic\tNA\tsplit\tq11.21\tFAM230A\t\t\t\tNR_165629\t1\t20326419\t20350461\t24042\t0\t0\tNA\t12\ttxStart-txEnd\tUTR\t\t\t20326419\t20350461\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tDDD:56225;DDD:56226\t22:20313251-20369884;22:20322450-20718598\t0.0509\tDDD:56225;DDD:56226;dbVar\tchr22:18934999-21466000;22:20313251-20369884;22:20322450-20718598\t0.0959\t\t\t\tIMH\t22:17036164-22613666;22:18655109-20719124;22:19014638-21718005\t0.1686\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t97.89\t\t\t\t\t\t\t\t\t\t653203\tHGNC:45045\t\t\t\t\t\t7\t4.8065e-01\t\t\t\tfull=5\n22_18894836_21464119_DEL_1\t22\t18894836\t21464119\t-2569284\tDEL\tDi George syndrom\tPathogenic\tNA\tsplit\tq11.21\tFAM247B\t\t\t\tNR_186690\t1\t20351090\t20362291\t11201\t0\t0\tNA\t2\ttxStart-txEnd\tUTR\t\t\t20351090\t20362291\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tDDD:56225;DDD:56226;DDD:56232;DDD:56234\t22:20313251-20369884;22:20322450-20718598;22:20330330-20450295;22:20343574-20380608\t0.0509\tDDD:56225;DDD:56226;DDD:56232;DDD:56234;dbVar\tchr22:18934999-21466000;22:20313251-20369884;22:20322450-20718598;22:20330330-20450295;22:20343574-20380608\t0.0959\t\t\t\tIMH\t22:17036164-22613666;22:18655109-20719124;22:19014638-21718005\t0.1686\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tfull=5\n22_18894836_21464119_DEL_1\t22\t18894836\t21464119\t-2569284\tDEL\tDi George syndrom\tPathogenic\tNA\tsplit\tq11.21\tGGTLC3\t\t\t\tNM_001355479\t1\t20366210\t20368028\t1818\t678\t100\tno\t6\ttxStart-txEnd\t5'UTR-3'UTR\t\t\t20366210\t20368028\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tDDD:56225;DDD:56226;DDD:56232;DDD:56234\t22:20313251-20369884;22:20322450-20718598;22:20330330-20450295;22:20343574-20380608\t0.0509\tDDD:56225;DDD:56226;DDD:56232;DDD:56234;dbVar\tchr22:18934999-21466000;22:20313251-20369884;22:20322450-20718598;22:20330330-20450295;22:20343574-20380608\t0.0959\t\t\t\tIMH\t22:17036164-22613666;22:18655109-20719124;22:19014638-21718005\t0.1686\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t94.16\t\t\t\t\t\t\t\t\t\t728226\tHGNC:33426\t\t\t\t\t\t\t\t\t\t\tfull=5\n22_18894836_21464119_DEL_1\t22\t18894836\t21464119\t-2569284\tDEL\tDi George syndrom\tPathogenic\tNA\tsplit\tq11.21\tTMEM191B\t\t\t\tNM_001242313\t1\t20377668\t20380440\t2772\t1041\t100\tno\t9\ttxStart-txEnd\t5'UTR-3'UTR\t\t\t20377668\t20380440\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tDDD:56226;DDD:56232;DDD:56234\t22:20322450-20718598;22:20330330-20450295;22:20343574-20380608\t0.0509\tDDD:56226;DDD:56232;DDD:56234;dbVar\tchr22:18934999-21466000;22:20322450-20718598;22:20330330-20450295;22:20343574-20380608;chr22:20366424-20403000;chr22:20374000-20389000\t0.0284\t\t\t\tIMH\t22:17036164-22613666;22:18655109-20719124;22:19014638-21718005\t0.1686\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t728229\tHGNC:33600\t\t\t\t\t\t\t\t\t\t\tfull=5\n22_18894836_21464119_DEL_1\t22\t18894836\t21464119\t-2569284\tDEL\tDi George syndrom\tPathogenic\tNA\tsplit\tq11.21\tPI4KAP1\t\t\t\tNR_003563\t1\t20383730\t20398695\t14965\t0\t0\tNA\t15\ttxStart-txEnd\tUTR\t\t\t20383730\t20398695\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tDDD:56226;DDD:56232\t22:20322450-20718598;22:20330330-20450295\t0.0509\tDDD:56226;DDD:56232;dbVar\tchr22:18934999-21466000;22:20322450-20718598;22:20330330-20450295;chr22:20366424-20403000\t0.0189\t\t\t\tIMH\t22:17036164-22613666;22:18655109-20719124;22:19014638-21718005\t0.1686\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t728233\tHGNC:33576\t\t\t\t\t\t\t\t\t\t\tfull=5\n22_18894836_21464119_DEL_1\t22\t18894836\t21464119\t-2569284\tDEL\tDi George syndrom\tPathogenic\tNA\tsplit\tq11.21\tRIMBP3\t\t\t\tNM_015672\t2\t20455681\t20461786\t6105\t4920\t91\tno\t1\ttxStart-txEnd\t5'UTR-3'UTR\t\t\t20455681\t20461786\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tDDD:56226\t22:20322450-20718598\t0.0509\tDDD:56226;HI40:ISCA-46728;dbVar;dgv817e199\tchr22:18934999-21466000;22:20322450-20718598;22:20423846-20488792;22:20428071-20499197\t0.0300\t\t\t\tIMH\t22:17036164-22613666;22:18655109-20719124;22:19014638-21718005\t0.1686\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t90.21\t\t\t\t\t\t\t\t\t\t85376\tHGNC:29344\t\t\t\t\t\t7\t9.0005e-09\t\t\t\tfull=5\n22_18894836_21464119_DEL_1\t22\t18894836\t21464119\t-2569284\tDEL\tDi George syndrom\tPathogenic\tNA\tsplit\tq11.21\tFAM246B\t\t\t\tNM_001396026\t1\t20483850\t20484549\t699\t699\t100\tno\t1\ttxStart-txEnd\t5'UTR-3'UTR\t\t\t20483850\t20484549\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tDDD:56226\t22:20322450-20718598\t0.0509\tDDD:56226;HI40:ISCA-46728;dbVar;dgv817e199\tchr22:18934999-21466000;22:20322450-20718598;22:20423846-20488792;22:20428071-20499197\t0.0300\t\t\t\tIMH\t22:17036164-22613666;22:18655109-20719124;22:19014638-21718005\t0.1686\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t117134597\tHGNC:54843\t\t\t\t\t\t\t\t\t\t\tfull=5\n22_18894836_21464119_DEL_1\t22\t18894836\t21464119\t-2569284\tDEL\tDi George syndrom\tPathogenic\tNA\tsplit\tq11.21\tFAM230J\t\t\t\tNR_136569\t2\t20632119\t20656858\t24739\t0\t0\tNA\t9\ttxStart-txEnd\tUTR\t\t\t20632119\t20656858\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tDDD:56226\t22:20322450-20718598\t0.0509\tDDD:56226;dbVar\tchr22:18934999-21466000;22:20322450-20718598\t0.0118\t\t\t\tIMH\t22:17036164-22613666;22:18655109-20719124;22:19014638-21718005\t0.1686\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t729461\tHGNC:52448\t\t\t\t\t\t\t\t\t\t\tfull=5\n22_18894836_21464119_DEL_1\t22\t18894836\t21464119\t-2569284\tDEL\tDi George syndrom\tPathogenic\tNA\tsplit\tq11.21\tFAM230G\t\t\t\tNR_165637\t1\t20689194\t20706786\t17592\t0\t0\tNA\t7\ttxStart-txEnd\tUTR\t\t\t20689194\t20706786\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tDDD:56226;DDD:56255\t22:20322450-20718598;22:20659548-20717455\t0.0509\tDDD:56226;DDD:56255;dbVar\tchr22:18934999-21466000;22:20322450-20718598;22:20659548-20717455\t0.0604\t\t\t\tIMH\t22:17036164-22613666;22:18655109-20719124;22:19014638-21718005\t0.1686\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t101927859\tHGNC:52423\t\t\t\t\t\t\t\t\t\t\tfull=5\n22_18894836_21464119_DEL_1\t22\t18894836\t21464119\t-2569284\tDEL\tDi George syndrom\tPathogenic\tNA\tsplit\tq11.21\tZNF74\t\t\t\tNM_001256524\t2\t20748440\t20762745\t14305\t1935\t100\tno\t6\ttxStart-txEnd\t5'UTR-3'UTR\t\t\t20748440\t20762745\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tdbVar\tchr22:18934999-21466000\t0.01\t\t\t\tIMH\t22:17036164-22613666;22:19014638-21718005\t0.1686\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t86.28\t-1.30437956536809\t-1.89912490049618\t-1.51976012533128\t2.28676628831896\t2.39892044394279\t\t\t\t\t7625\tHGNC:13144\t\t\t\t\t\t4\t1.5586e-06\t3.5588e-04\t\t\tfull=5\n22_18894836_21464119_DEL_1\t22\t18894836\t21464119\t-2569284\tDEL\tDi George syndrom\tPathogenic\tNA\tsplit\tq11.21\tSCARF2\t\t\t\tNM_153334\t7\t20778873\t20792112\t13239\t2607\t100\tno\t14\ttxStart-txEnd\t5'UTR-3'UTR\t\t\t20778873\t20792112\t\t\t\t\t\tVan den Ende-Gupta syndrome, 600920 (3) AR\t\tmorbid:SCARF2\t22:20778874-20792112\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t3\tVan_den_Ende-Gupta_syndrome\t\t\t\tdbVar\tchr22:18934999-21466000\t0.01\t\t\t\tIMH\t22:17036164-22613666;22:19014638-21718005\t0.1686\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t30\t0\t70.17\t-1.42333559636086\t-1.93669033911618\t-1.61173791689534\t\t\tvan den Ende-Gupta syndrome\tAR\tLimited;Moderate;Strong;Supportive\t20887961;20887961[PMID]_22140376[PMID];22140376;23808541;24478002;3808541\t91179\tHGNC:19869\t613619\tVan den Ende-Gupta syndrome, 600920 (3) AR\tAR\tyes\t\t0\t9.9980e-01\t\t\t\tfull=5\n22_18894836_21464119_DEL_1\t22\t18894836\t21464119\t-2569284\tDEL\tDi George syndrom\tPathogenic\tNA\tsplit\tq11.21\tKLHL22\t\t\t\tNM_032775\t4\t20795805\t20850082\t54277\t1905\t100\tno\t7\ttxStart-txEnd\t5'UTR-3'UTR\t\t\t20795805\t20850082\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tdbVar\tchr22:18934999-21466000\t0.01\t\t\t\tIMH\t22:17036164-22613666;22:19014638-21718005\t0.1686\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t41.2\t-1.60479766897668\t-1.94085802577819\t-1.599983320827\t-0.00460568166698648\t2.85964800561254\t\t\t\t\t84861\tHGNC:25888\t\t\t\t\t\t2\t4.2419e-01\t7.0261e-01\t\t\tfull=5\n22_18894836_21464119_DEL_1\t22\t18894836\t21464119\t-2569284\tDEL\tDi George syndrom\tPathogenic\tNA\tsplit\tq11.21\tMED15\t\t\t\tNM_001003891\t3\t20861896\t20941906\t80010\t2367\t100\tno\t18\ttxStart-txEnd\t5'UTR-3'UTR\t\t\t20861896\t20941906\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tdbVar\tchr22:18934999-21466000\t0.01\t\t\t\tIMH\t22:17036164-22613666;22:19014638-21718005\t0.1686\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t24.41\t\t\t\t0.672972182845271\t2.65389095774821\t\t\t\t\t51586\tHGNC:14248\t\t\t\t\t\t0\t9.9974e-01\t9.6081e-01\t\t\tfull=5\n22_18894836_21464119_DEL_1\t22\t18894836\t21464119\t-2569284\tDEL\tDi George syndrom\tPathogenic\tNA\tsplit\tq11.21\tPOM121L4P\t\t\t\tNR_024592\t1\t21043842\t21046009\t2167\t0\t0\tNA\t1\ttxStart-txEnd\tUTR\t\t\t21043842\t21046009\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tdbVar\tchr22:18934999-21466000;chr22:21027000-21048000\t0.01\t\t\t\tIMH\t22:17036164-22613666;22:19014638-21718005;22:21042853-21483407\t0.1686\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tfull=5\n22_18894836_21464119_DEL_1\t22\t18894836\t21464119\t-2569284\tDEL\tDi George syndrom\tPathogenic\tNA\tsplit\tq11.21\tTMEM191A\t\t\t\tNR_026815\t1\t21055401\t21058891\t3490\t0\t0\tNA\t8\ttxStart-txEnd\tUTR\t\t\t21055401\t21058891\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tdbVar\tchr22:18934999-21466000;chr22:21052000-21466000\t0.01\t\t\t\tIMH\t22:17036164-22613666;22:19014638-21718005;22:21042853-21483407\t0.1686\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t84222\tHGNC:25317\t\t\t\t\t\t\t\t\t\t\tfull=5\n22_18894836_21464119_DEL_1\t22\t18894836\t21464119\t-2569284\tDEL\tDi George syndrom\tPathogenic\tNA\tsplit\tq11.21\tPI4KA\t\t\t\tNM_058004\t4\t21061978\t21213099\t151121\t6309\t100\tno\t55\ttxStart-txEnd\t5'UTR-3'UTR\t\t\t21061978\t21213099\t\t\t\t\t\tGastrointestinal defects and immunodeficiency syndrome 2, 619708 (3) AR;Polymicrogyria, perisylvian, with cerebellar hypoplasia and arthrogryposis, 616531 (3) AR;Spastic paraplegia 84, AR, 619621 (3) AR;Thrombophilia 10 due to heparin cofactor II deficiency, 612356 (3) AD\t\tmorbid:PI4KA;morbid:SERPIND1\t22:21061979-21213099;22:21128401-21142008\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t8\tPI4KA-related_disorder;Polymicrogyria,_perisylvian,_with_cerebellar_hypoplasia_and_arthrogryposis;Spastic_paraplegia_84,_autosomal_recessive\t\t\t\tdbVar\tchr22:18934999-21466000;chr22:21052000-21466000\t0.01\t\t\t\tIMH\t22:17036164-22613666;22:19014638-21718005;22:21042853-21483407\t0.1686\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t35.17\t\t\t\t1.20573288011437\t5.29477062168781\tpolymicrogyria, perisylvian, with cerebellar hypoplasia and arthrogryposis\tAR\tModerate;Strong\t25855803;29738522;30614210;34415310;34415322\t5297\tHGNC:8983\t600286\tGastrointestinal defects and immunodeficiency syndrome 2, 619708 (3) AR;Polymicrogyria, perisylvian, with cerebellar hypoplasia and arthrogryposis, 616531 (3) AR;Spastic paraplegia 84, AR, 619621 (3) AR\tAR\tyes\t\t2\t3.1234e-12\t8.0407e-04\t\t\tfull=5\n22_18894836_21464119_DEL_1\t22\t18894836\t21464119\t-2569284\tDEL\tDi George syndrom\tPathogenic\tNA\tsplit\tq11.21\tSERPIND1\t\t\t\tNM_000185\t4\t21128400\t21142008\t13608\t1500\t100\tno\t5\ttxStart-txEnd\t5'UTR-3'UTR\t\t\t21128400\t21142008\t\t\t\t\t\tThrombophilia 10 due to heparin cofactor II deficiency, 612356 (3) AD\t\tmorbid:SERPIND1\t22:21128401-21142008\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tdbVar\tchr22:18934999-21466000;chr22:21052000-21466000;chr22:21078735-21159481\t0.01\t\t\t\tIMH\t22:17036164-22613666;22:19014638-21718005;22:21042853-21483407\t0.1686\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t68.88\t-1.06265755233802\t-1.49456297636655\t-1.03231231326932\t-0.289055396385536\t-0.349034099945665\theparin cofactor 2 deficiency\tAD\tDefinitive;Limited;Strong\t15337701;2647747;277130;8562924\t3053\tHGNC:4838\t142360\tThrombophilia 10 due to heparin cofactor II deficiency, 612356 (3) AD\tAD\tyes\t\t8\t2.5137e-10\t2.7955e-05\t\t\tfull=5\n22_18894836_21464119_DEL_1\t22\t18894836\t21464119\t-2569284\tDEL\tDi George syndrom\tPathogenic\tNA\tsplit\tq11.21\tSNAP29\t\t\t\tNM_004782\t4\t21213294\t21245502\t32208\t777\t100\tno\t5\ttxStart-txEnd\t5'UTR-3'UTR\t\t\t21213294\t21245502\t\t\t\t\t\tCerebral dysgenesis, neuropathy, ichthyosis, and palmoplantar keratoderma syndrome, 609528 (3) AR\t\tmorbid:SNAP29\t22:21213295-21245502\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t15\tCEDNIK_syndrome;Hypomyelinating_leukodystrophy_2;Inborn_genetic_diseases\t\t\t\tdbVar\tchr22:18934999-21466000;chr22:21052000-21466000\t0.01\t\t\t\tIMH\t22:17036164-22613666;22:19014638-21718005;22:21042853-21483407\t0.1686\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t30\t\t61.36\t-1.39880243235913\t-1.53414994058354\t-1.19910660480315\t1.58078637399342\t-0.841707455415557\tCEDNIK syndrome\tAR\tStrong;Supportive\t15968592;15968592[PMID]_21073448[PMID];21073448;23231787;25473036;26747696\t9342\tHGNC:11133\t604202\tCerebral dysgenesis, neuropathy, ichthyosis, and palmoplantar keratoderma syndrome, 609528 (3) AR\tAR\tyes\t\t4\t1.3567e-02\t1.5166e-01\t\t\tfull=5\n22_18894836_21464119_DEL_1\t22\t18894836\t21464119\t-2569284\tDEL\tDi George syndrom\tPathogenic\tNA\tsplit\tq11.21\tCRKL\t\t\t\tNM_005207\t4\t21271694\t21308035\t36341\t912\t100\tno\t3\ttxStart-txEnd\t5'UTR-3'UTR\t\t\t21271694\t21308035\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tdbVar\tchr22:18934999-21466000;chr22:21052000-21466000;chr22:21256865-21435776\t0.01\t\t\t\tIMH\t22:17036164-22613666;22:19014638-21718005;22:21042853-21483407\t0.1686\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t1\t0\t4.35\t-0.928255048107525\t-1.20830830104818\t-0.791505674827999\t0.477351976371369\t3.00980268645085\tcongenital heart disease\t\tNo Known Disease Relationship\t\t1399\tHGNC:2363\t\t\t\t\t\t3\t4.4604e-01\t1.6345e-01\t\t\tfull=5\n22_18894836_21464119_DEL_1\t22\t18894836\t21464119\t-2569284\tDEL\tDi George syndrom\tPathogenic\tNA\tsplit\tq11.21\tLINC01637\t\t\t\tNR_110537\t1\t21311379\t21318968\t7589\t0\t0\tNA\t2\ttxStart-txEnd\tUTR\t\t\t21311379\t21318968\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tdbVar\tchr22:18934999-21466000;chr22:21052000-21466000;chr22:21256865-21435776\t0.01\t\t\t\tIMH\t22:17036164-22613666;22:19014638-21718005;22:21042853-21483407\t0.1686\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t101928891\tHGNC:52424\t\t\t\t\t\t\t\t\t\t\tfull=5\n22_18894836_21464119_DEL_1\t22\t18894836\t21464119\t-2569284\tDEL\tDi George syndrom\tPathogenic\tNA\tsplit\tq11.21\tAIFM3\t\t\t\tNM_144704\t3\t21319459\t21335647\t16188\t1818\t100\tno\t21\ttxStart-txEnd\t5'UTR-3'UTR\t\t\t21319459\t21335647\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tdbVar\tchr22:18934999-21466000;chr22:21052000-21466000;chr22:21256865-21435776\t0.01\t\t\t\tIMH\t22:17036164-22613666;22:19014638-21718005;22:21042853-21483407\t0.1686\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t38.59\t-1.14442881641699\t-1.26664892202732\t-0.922844550293754\t0.687283106386744\t1.33036583543754\t\t\t\t\t150209\tHGNC:26398\t\t\t\t\t\t5\t1.9474e-14\t1.9583e-10\t\t\tfull=5\n22_18894836_21464119_DEL_1\t22\t18894836\t21464119\t-2569284\tDEL\tDi George syndrom\tPathogenic\tNA\tsplit\tq11.21\tLZTR1\t\t\t\tNM_006767\t4\t21336585\t21353321\t16736\t2523\t100\tno\t21\ttxStart-txEnd\t5'UTR-3'UTR\t\t\t21336585\t21353321\t\tSchwannomatosis\t\tCLN:906110;CLN:906111;CLN:917324\t22:21344737-21344807;22:21345949-21346047;22:21348439-21348534\tNoonan syndrome 10, 616564 (3) AD;Noonan syndrome 2, 605275 (3) AR;Schwannomatosis-2, susceptibility to, 615670 (3) AD\t\tCLN:2871255;dbVar:nssv17171582;dbVar:nssv17971092;morbid:LZTR1\t22:21336586-21353321;22:21336662-21337398;22:21336662-21351637;22:21348908-21348985\t\t\tCLN:1349334;dbVar:nssv17974796\t22:21337344-21337343;22:21337344-21337456\t\t\t\t\t\t\t\t\t\t\t502\tAutism_spectrum_disorder;Cardiovascular_phenotype;Emery-Dreifuss_muscular_dystrophy;Hereditary_cancer-predisposing_syndrome;Hypertrophic_cardiomyopathy_1;LZTR1-related_disorder;LZTR1-related_schwannomatosis;Male_infertility_with_azoospermia_or_oligozoospermia_due_to_single_gene_mutation;Noonan_syndrome;Noonan_syndrome_1;Noonan_syndrome_10;Noonan_syndrome_2;Noonan_syndrome_and_Noonan-related_syndrome;RASopathy;Schwannomatosis;See_cases;not_specified\t\t\t\tdbVar\tchr22:18934999-21466000;chr22:21052000-21466000;chr22:21256865-21435776\t0.01\t\t\t\tIMH\t22:17036164-22613666;22:19014638-21718005;22:21042853-21483407\t0.1686\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t32.82\t-1.25119505668143\t-1.28020537251329\t-0.946080819110286\t0.246895000414255\t0.909128978651125\tLZTR1-related schwannomatosis;Noonan syndrome;Noonan syndrome 10;Noonan syndrome 2;breast cancer;schwannomatosis\tAD;AR\tDefinitive;Moderate;Strong;Supportive\t15955931;16534111;23401320;24362817;25335493;25480913;25795793;25795793[PMID];26446362;274799;278971;287232;29469822;29959388;30368668;303983;30442762;30442766;30481304;30859559;31182298;37592023;37936555;38135892\t8216\tHGNC:6742\t600574\tNoonan syndrome 10, 616564 (3) AD;Noonan syndrome 2, 605275 (3) AR;(Schwannomatosis-2, susceptibility to), 615670 (3) AD\tAD;AR\tyes\tyes\t9\t1.0211e-92\t3.3832e-52\t\t\tfull=5\n22_18894836_21464119_DEL_1\t22\t18894836\t21464119\t-2569284\tDEL\tDi George syndrom\tPathogenic\tNA\tsplit\tq11.21\tTHAP7\t\t\t\tNM_030573\t3\t21353392\t21356407\t3015\t930\t100\tno\t4\ttxStart-txEnd\t5'UTR-3'UTR\t\t\t21353392\t21356407\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tdbVar\tchr22:18934999-21466000;chr22:21052000-21466000;chr22:21256865-21435776\t0.01\t\t\t\tIMH\t22:17036164-22613666;22:19014638-21718005;22:21042853-21483407\t0.1686\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t50.87\t-1.44618961523547\t-1.52989215323949\t-1.19895133869269\t-1.50983365445593\t1.16392737773964\t\t\t\t\t80764\tHGNC:23190\t\t\t\t\t\t4\t1.3291e-02\t2.9328e-02\t\t\tfull=5\n22_18894836_21464119_DEL_1\t22\t18894836\t21464119\t-2569284\tDEL\tDi George syndrom\tPathogenic\tNA\tsplit\tq11.21\tTHAP7-AS1\t\t\t\tNR_027051\t1\t21356210\t21364663\t8453\t0\t0\tNA\t2\ttxStart-txEnd\tUTR\t\t\t21356210\t21364663\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tdbVar\tchr22:18934999-21466000;chr22:21052000-21466000;chr22:21256865-21435776\t0.01\t\t\t\tIMH\t22:17036164-22613666;22:19014638-21718005;22:21042853-21483407\t0.1686\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t439931\tHGNC:41013\t\t\t\t\t\t\t\t\t\t\tfull=5\n22_18894836_21464119_DEL_1\t22\t18894836\t21464119\t-2569284\tDEL\tDi George syndrom\tPathogenic\tNA\tsplit\tq11.21\tTUBA3FP\t\t\t\tNR_003608\t1\t21362491\t21368576\t6085\t0\t0\tNA\t3\ttxStart-txEnd\tUTR\t\t\t21362491\t21368576\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tdbVar\tchr22:18934999-21466000;chr22:21052000-21466000;chr22:21256865-21435776;chr22:21358356-21370047;chr22:21360600-21369738\t0.01\t\t\t\tIMH\t22:17036164-22613666;22:19014638-21718005;22:21042853-21483407\t0.1686\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t113691\tHGNC:24067\t\t\t\t\t\t\t\t\t\t\tfull=5\n22_18894836_21464119_DEL_1\t22\t18894836\t21464119\t-2569284\tDEL\tDi George syndrom\tPathogenic\tNA\tsplit\tq11.21\tP2RX6\t\t\t\tNM_001394691\t1\t21369453\t21382297\t12844\t1422\t100\tno\t12\ttxStart-txEnd\t5'UTR-3'UTR\t\t\t21369453\t21382297\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tdbVar\tchr22:18934999-21466000;chr22:21052000-21466000;chr22:21256865-21435776\t0.01\t\t\t\tIMH\t22:17036164-22613666;22:19014638-21718005;22:21042853-21483407\t0.1686\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t76.26\t-1.8606303493434\t-1.51336493990188\t-1.2805127161158\t-0.990180484365383\t-0.63060581685217\tmyopathy\tAR\tLimited\t\t9127\tHGNC:8538\t\t\t\t\t\t6\t4.4680e-09\t1.8785e-07\t\t\tfull=5\n22_18894836_21464119_DEL_1\t22\t18894836\t21464119\t-2569284\tDEL\tDi George syndrom\tPathogenic\tNA\tsplit\tq11.21\tSLC7A4\t\t\t\tNM_004173\t3\t21383006\t21386850\t3844\t1908\t100\tno\t5\ttxStart-txEnd\t5'UTR-3'UTR\t\t\t21383006\t21386850\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tdbVar\tchr22:18934999-21466000;chr22:21052000-21466000;chr22:21256865-21435776\t0.01\t\t\t\tIMH\t22:17036164-22613666;22:19014638-21718005;22:21042853-21483407\t0.1686\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t74.02\t-0.807902299547855\t-1.26588610868392\t-1.04316708587741\t-0.387275128092876\t-1.12481109733158\t\t\t\t\t6545\tHGNC:11062\t\t\t\t\t\t6\t2.8317e-07\t1.0047e-04\t\t\tfull=5\n22_18894836_21464119_DEL_1\t22\t18894836\t21464119\t-2569284\tDEL\tDi George syndrom\tPathogenic\tNA\tsplit\tq11.21\tMIR649\t\t\t\tNR_030379\t1\t21388464\t21388561\t97\t0\t0\tNA\t1\ttxStart-txEnd\tUTR\t\t\t21388464\t21388561\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tesv2760719\t22:21383283-21845355\t0.0100\tdbVar\tchr22:18934999-21466000;chr22:21052000-21466000;chr22:21256865-21435776\t0.01\t\t\t\tIMH\t22:17036164-22613666;22:19014638-21718005;22:21042853-21483407\t0.1686\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t693234\tHGNC:32905\t\t\t\t\t\t\t\t\t\t\tfull=5\n22_18894836_21464119_DEL_1\t22\t18894836\t21464119\t-2569284\tDEL\tDi George syndrom\tPathogenic\tNA\tsplit\tq11.21\tP2RX6P\t\t\t\tNR_002829\t1\t21396680\t21398538\t1858\t0\t0\tNA\t2\ttxStart-txEnd\tUTR\t\t\t21396680\t21398538\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tesv2760719\t22:21383283-21845355\t0.0100\tdbVar\tchr22:18934999-21466000;chr22:21052000-21466000;chr22:21256865-21435776\t0.01\t\t\t\tIMH\t22:17036164-22613666;22:19014638-21718005;22:21042853-21483407\t0.1686\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t440799\tHGNC:34076\t\t\t\t\t\t\t\t\t\t\tfull=5\n22_18894836_21464119_DEL_1\t22\t18894836\t21464119\t-2569284\tDEL\tDi George syndrom\tPathogenic\tNA\tsplit\tq11.21\tLRRC74B\t\t\t\tNM_001291006\t2\t21400234\t21418457\t18223\t1179\t100\tno\t10\ttxStart-txEnd\t5'UTR-3'UTR\t\t\t21400234\t21418457\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tesv2760719\t22:21383283-21845355\t0.0100\tdbVar\tchr22:18934999-21466000;chr22:21052000-21466000;chr22:21256865-21435776\t0.01\t\t\t\tIMH\t22:17036164-22613666;22:19014638-21718005;22:21042853-21483407\t0.1686\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t400891\tHGNC:34301\t\t\t\t\t\t\t\t\t\t\tfull=5\n22_18894836_21464119_DEL_1\t22\t18894836\t21464119\t-2569284\tDEL\tDi George syndrom\tPathogenic\tNA\tsplit\tq11.21\tBCRP2\t\t\t\tNR_037566\t1\t21457304\t21476575\t6815\t0\t0\tNA\t6\ttxStart-intron1\tUTR\t6098\t3'\t21457304\t21464119\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tesv2760719\t22:21383283-21845355\t0.0100\tdbVar\tchr22:18934999-21466000;chr22:21052000-21466000;chr22:21455959-21464881;chr22:21456000-21467000\t0.01\t\t\t\tIMH\t22:17036164-22613666;22:19014638-21718005;22:21042853-21483407\t0.1686\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t400892\tHGNC:1015\t\t\t\t\t\t\t\t\t\t\tfull=5\n4_71553_9371067_DEL_1\t4\t71553\t9371067\t-9299515\tDEL\t4p- syndrom\tPathogenic\tNA\tfull\tp16.3-p16.1\tZNF595;ZNF718;ZNF876P;ZNF732;ZNF141;MIR571;ABCA11P;ZNF721;PIGG;TMEM271;LOC105374338;PDE6B;PDE6B-AS1;ATP5ME;MYL5;SLC49A3;PCGF3;PCGF3-AS1;CPLX1;GAK;TMEM175;DGKQ;SLC26A1;IDUA;FGFRL1;RNF212;LOC105374344;TMED11P;SPON2;LOC100130872;CTBP1-AS;CTBP1;CTBP1-DT;MAEA;UVSSA;NKX1-1;FAM53A;SLBP;TMEM129;TACC3;FGFR3;LETM1;NSD2;SCARNA22;NELFA;MIR943;NICOL1;NAT8L;POLN;HAUS3;MXD4;MIR4800;ZFYVE28;CFAP99;RNF4;FAM193A;TNIP2;SH3BP2;ADD1;MFSD10;NOP14-AS1;NOP14;GRK4;HTT-AS;HTT;MSANTD1;RGS12;HGFAC;DOK7;LRPAP1;LINC00955;LINC02171;ADRA2C;FAM86EP;OTOP1;TMEM128;LYAR;ZBTB49;NSG1;STX18;STX18-IT1;STX18-AS1;SNORD162;LOC101928279;LINC01396;MSX1;LOC101928306;CYTL1;STK32B;LINC01587;EVC2;EVC;CRMP1;MIR378D1;C4orf50;JAKMIP1;LOC128125818;JAKMIP1-DT;WFS1;PPP2R2C;MAN2B2;MRFAP1;LINC02482;MRFAP1L2;LINC02481;S100P;MRFAP1L1;BLOC1S4;KIAA0232;TBC1D14;LOC100129931;CFAP184;TADA2B;GRPEL1;LINC02447;SORCS2;MIR4798;PSAPL1;MIR4274;AFAP1-AS1;AFAP1;LOC389199;ABLIM2;MIR95;SH3TC1;HTRA3;LINC02517;ACOX3;TRMT44;GPR78;CPZ;LOC101928532;HMX1;FAM90A26;USP17L10;USP17L11;USP17L12;USP17L13;USP17L15;USP17L17;USP17L18;USP17L19;USP17L20;USP17L21;USP17L22;USP17L24;USP17L25;USP17L26;USP17L5;USP17L27;USP17L28;USP17L29;USP17L9P;USP17L30;USP17L6P\t\tDEFB131A\t155\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tACACA (morbid/RE=mTL_miRNA);ACTC1 (morbid/RE=mTL_miRNA);ACVR1 (morbid/RE=mTL_miRNA);AGO2 (morbid/RE=mTL_miRNA);AKT1 (morbid/RE=mTL_miRNA);ANTXR2 (morbid/RE=mTL_miRNA);ARF1 (morbid/RE=mTL_miRNA);ARHGDIA (morbid/RE=mTL_miRNA);ARL6IP1 (morbid/RE=mTL_miRNA);ARPC1B (morbid/RE=mTL_miRNA);ATXN2 (morbid/RE=mTL_miRNA);CAD (morbid/RE=mTL_miRNA);CALM2 (morbid/RE=mTL_miRNA);CASK (morbid/RE=mTL_miRNA);CCNF (morbid/RE=mTL_miRNA);CELF2 (morbid/RE=mTL_miRNA);CEP55 (morbid/RE=mTL_miRNA);CIITA (morbid/RE=mTL_miRNA);CNTNAP2 (morbid/RE=mTL_miRNA);COL18A1 (morbid/RE=mTL_miRNA);COL1A1 (HI=3/morbid/RE=mTL_miRNA);CREBBP (HI=3/morbid/RE=mTL_miRNA);CTCF (HI=3/morbid/RE=mTL_miRNA);DAAM2 (morbid/RE=mTL_miRNA);DDR2 (morbid/RE=mTL_miRNA);DDX3X (HI=3/morbid/RE=mTL_miRNA);EDEM3 (morbid/RE=mTL_miRNA);EGLN1 (morbid/RE=mTL_miRNA);ELOVL5 (morbid/RE=mTL_miRNA);ESCO2 (morbid/RE=mTL_miRNA);FBXO22 (morbid/RE=mTL_miRNA);FICD (morbid/RE=mTL_miRNA);FLCN (HI=3/morbid/RE=mTL_miRNA);FLVCR1 (morbid/RE=mTL_miRNA);FOXC1 (HI=3/morbid/RE=mTL_miRNA);FOXP2 (HI=3/morbid/RE=mTL_miRNA);G6PD (morbid/RE=mTL_miRNA);GABRB2 (morbid/RE=mTL_miRNA);GATA6 (HI=3/morbid/RE=mTL_miRNA);GLI2 (HI=3/morbid/RE=mTL_miRNA);GLUL (morbid/RE=mTL_miRNA);GNAS (HI=3/morbid/RE=mTL_miRNA);HERC2 (morbid/RE=mTL_miRNA);HFE (morbid/RE=mTL_miRNA);IGF1R (HI=3/morbid/RE=mTL_miRNA);INF2 (morbid/RE=mTL_miRNA);ITM2B (morbid/RE=mTL_miRNA);KCNJ6 (morbid/RE=mTL_miRNA);LAMA4 (morbid/RE=mTL_miRNA);LMNB2 (morbid/RE=mTL_miRNA)...\tRetinitis_pigmentosa_40;Retinitis_pigmentosa|Retinitis_pigmentosa_40\tHP:0000547\tCLN:28147;CLN:801370;dbVar:nssv15124412;dbVar:nssv15130095;dbVar:nssv15132150;dbVar:nssv15132411;dbVar:nssv15132589;dbVar:nssv15133497;dbVar:nssv15153559;dbVar:nssv15161020;dbVar:nssv16255833;dbVar:nssv16867404;dbVar:nssv17172169;dbVar:nssv17973849;dbVar:nssv18330201\t4:127234-8667610;4:1420949-1836794;4:1737489-1808653;4:1770487-2303110;4:374558-745174;4:5567009-5587839;4:5785270-5803831;4:614356-2959936;4:619584-619584;4:619584-619655;4:619590-619662;4:72448-3848881;4:72448-5608810;4:85041-4597934;4:963689-2913553\t4p16.3 terminal (Wolf-Hirschhorn syndrome) region;?Cataract 41, 116400 (3) AD;Deafness, AD 6;14;38, 600965 (3) AD;Wolfram syndrome 1, 222300 (3) AR;Wolfram-like syndrome, AD, 614296 (3) AD;Diabetes mellitus, noninsulin-dependent, association with, 125853 (3) AD;?Spermatogenic failure 62, 619673 (3) AR;Recombination rate QTL 1, 612042 (3);?Weyers acrofacial dysostosis, 193530 (3) AD;Ellis-van Creveld syndrome, 225500 (3) AR;Achondroplasia, 100800 (3) AD;Bladder cancer, somatic, 109800 (3);CATSHL syndrome, 610474 (3) AD,AR;Cervical cancer, somatic, 603956 (3);Colorectal cancer, somatic, 114500 (3);Crouzon syndrome with acanthosis nigricans, 612247 (3) AD;Hypochondroplasia, 146000 (3) AD;LADD syndrome 2, 620192 (3) AD;Muenke syndrome, 602849 (3) AD;Nevus, epidermal, somatic, 162900 (3);SADDAN, 616482 (3) AD;Spermatocytic seminoma, somatic, 273300 (3);Thanatophoric dysplasia, type I, 187600 (3) AD;Thanatophoric dysplasia, type II, 187601 (3) AD;Cherubism, 118400 (3) AD;Congenital disorder of glycosylation type 1EE with or without immunodeficiency, 621140 (3) AR;Developmental and epileptic encephalopathy 63, 617976 (3) AR;Ectodermal dysplasia 3, Witkop type, 189500 (3) AD;Orofacial cleft 5, 608874 (3) AD;Tooth agenesis, selective, 1, with or without orofacial cleft, 106600 (3) AD;Ellis-van Creveld syndrome, 225500 (3) AR;Weyers acrofacial dysostosis, 193530 (3) AD;Ellis-van_Creveld_syndrome|Curry-Hall_syndrome;Fetal akinesia deformation sequence 3, 618389 (3) AR;Myasthenic syndrome, congenital, 10, 254300 (3) AR;Fetal_akinesia_deformation_sequence_1|Congenital_myasthenic_syndrome_10|Fetal_akinesia_deformation_sequence_3;Huntington disease, 143100 (3) AD;Lopes-Maciel-Rodan syndrome, 617435 (3) AR;Hurler_syndrome;Hypotonia, ataxia, developmental delay, and tooth enamel defect syndrome, 617915 (3) AD;Mucopolysaccharidosis Ih, 607014 (3) AR;Mucopolysaccharidosis Ih;s, 607015 (3) AR;Mucopolysaccharidosis Is, 607016 (3) AR;Mucopolysaccharidosis_type_1;Myopia 23, AR, 615431 (3) AR;Neurodegeneration, childhood-onset, with multisystem involvement due to mitochondrial dysfunction, 620089 (3) AR;Neurodevelopmental disorder with or without hypotonia, seizures, and cerebellar atrophy, 616917 (3) AR;Blood group, EMM system, 619812 (3) AR;Night blindness, congenital stationary, AD 2, 163500 (3) AD;Retinitis pigmentosa-40, 613801 (3) AR;Oculoauricular syndrome, 612109 (3) AR;Rauch-Steindl syndrome, 619695 (3) AD;UV-sensitive syndrome 3, 614640 (3) AR\tHP:0001989\tCLN:1313135;CLN:2672009;CLN:2834164;CLN:3496433;CLN:961843;HI3:ISCA-37429;HI3:MSX1;HI3:NSD2;dbVar:nssv15119851;dbVar:nssv15121023;dbVar:nssv15121032;dbVar:nssv15121033;dbVar:nssv15121034;dbVar:nssv15121217;dbVar:nssv15121218;dbVar:nssv15121687;dbVar:nssv15122678;dbVar:nssv15123516;dbVar:nssv15124520;dbVar:nssv15127349;dbVar:nssv15130945;dbVar:nssv15131476;dbVar:nssv15131910;dbVar:nssv15132407;dbVar:nssv15132408;dbVar:nssv15132580;nssv15140019;dbVar:nssv15132953;dbVar:nssv15133489;dbVar:nssv15133490;dbVar:nssv15133634;dbVar:nssv15134794;dbVar:nssv15134826;dbVar:nssv15135086;dbVar:nssv15135107;dbVar:nssv15138367;dbVar:nssv15138802;dbVar:nssv15138941;dbVar:nssv15139309;dbVar:nssv15144315;dbVar:nssv15147286;dbVar:nssv15153560;dbVar:nssv15153562;dbVar:nssv15605891;dbVar:nssv15606061;dbVar:nssv15770186;dbVar:nssv15770321;dbVar:nssv16211870;dbVar:nssv16212102;dbVar:nssv16213046;dbVar:nssv16213271;dbVar:nssv16213451;dbVar:nssv16213572;dbVar:nssv16213637;dbVar:nssv16213802;dbVar:nssv16214176;dbVar:nssv16214333;dbVar:nssv16216714;dbVar:nssv16252200;dbVar:nssv16253953;dbVar:nssv16254938;dbVar:nssv16297119;dbVar:nssv16297131;dbVar:nssv16867405;dbVar:nssv17171362;dbVar:nssv17171376;dbVar:nssv17171391;dbVar:nssv17171923;dbVar:nssv17172168;dbVar:nssv17172572;dbVar:nssv17172573;dbVar:nssv17172574;dbVar:nssv17172955;dbVar:nssv17173143;dbVar:nssv17173159;dbVar:nssv17683620;dbVar:nssv17970729;dbVar:nssv17970732;dbVar:nssv17971217;dbVar:nssv17971266;dbVar:nssv17971361;dbVar:nssv17971686;dbVar:nssv17971734;dbVar:nssv17971799;dbVar:nssv17971904;dbVar:nssv17972056;dbVar:nssv17972166;dbVar:nssv17972432;dbVar:nssv17973718;nssv17974037;dbVar:nssv17973748;dbVar:nssv17974578;dbVar:nssv17975024;dbVar:nssv17976233;dbVar:nssv17976464;dbVar:nssv17976477;dbVar:nssv17976550;dbVar:nssv18326580;dbVar:nssv18786244;dbVar:nssv18786333;dbVar:nssv18787193;dbVar:nssv18788241;dbVar:nssv18788242;dbVar:nssv18788927;dbVar:nssv18788928;dbVar:nssv18790018;dbVar:nssv18790019;dbVar:nssv18790020;dbVar:nssv18790021;dbVar:nssv18790022;dbVar:nssv18790117;dbVar:nssv18790118;dbVar:nssv18790119;dbVar:nssv18790120;dbVar:nssv18790121;dbVar:nssv18790180;dbVar:nssv18790633;dbVar:nssv18791534;dbVar:nssv18791535;dbVar:nssv18791536;dbVar:nssv18791537;dbVar:nssv18791538;dbVar:nssv18791542;dbVar:nssv18830727;morbid:CPLX1;morbid:CTBP1;morbid:DOK7;morbid:EVC;morbid:EVC2;morbid:FGFR3;morbid:HMX1;morbid:HTRA3;morbid:HTT;morbid:IDUA;morbid:LETM1;morbid:LRPAP1;morbid:MAN2B2;morbid:MSX1;morbid:NSD2;morbid:PDE6B;morbid:PIGG;morbid:RNF212;morbid:SH3BP2;morbid:UVSSA;morbid:WFS1\t4:1087097-1107352;4:1190912-2255904;4:1205233-1244143;4:1228529-2862002;4:129754-9371067;4:1305803-2460571;4:1340996-1381837;4:1619776-2181192;4:1701019-1975031;4:1784695-1919793;4:1795020-1810594;4:1813206-1857883;4:1827029-1860753;4:1873121-1983919;4:1902353-1950545;4:1941634-3879802;4:1966267-5913899;4:2009467-3080412;4:2200252-5710240;4:2364202-5447465;4:2820541-2842823;4:2909441-6871516;4:3076408-3245687;4:3085428-7591673;4:331569-2010962;4:3465094-3495238;4:3465104-3465298;4:3475114-3491543;4:3478201-3482971;4:3478271-3491403;4:3486271-3496209;4:3487104-3487370;4:3487247-3495248;4:3487257-3487395;4:3487257-3495238;4:3494467-3495228;4:3494950-3495048;4:3495083-3495158;4:3505339-3534149;4:3776785-7361544;4:388345-3872380;4:4859066-4864603;4:4861392-4865663;4:4861393-4865663;4:4861628-6304195;4:492999-533989;4:493126-2065854;4:493126-663896;4:493126-998181;4:493969-499930;4:494166-494410;4:499508-502759;4:501175-533158;4:502599-509994;4:507006-2214932;4:509743-533158;4:512203-518547;4:520809-1020391;4:524206-527790;4:5563147-5711294;4:5564166-5711275;4:5564566-5578191;4:5564566-5586587;4:5564566-5759862;4:5564576-5567096;4:5565511-5811251;4:5570162-5570377;4:5576403-5576509;4:5617140-5812774;4:5630277-5633769;4:5630336-5635926;4:5630338-5635927;4:5636440-5710337;4:5642222-5642585;4:5682978-5735172;4:5690875-5691080;4:5690875-5696238;4:5696053-5696238;4:5710004-5750043;4:5711925-5817031;4:5712928-5816032;4:5713109-5714221;4:5713159-5713318;4:5731025-5759862;4:5733143-5735172;4:5749726-5755670;4:5754554-5755670;4:5754554-5758099;4:5754554-5785501;4:5754599-5758602;4:5785270-5812774;4:5795340-5795484;4:5795341-5795483;4:5798730-5798979;4:5798740-5798969;4:5803668-5806578;4:5809919-5811348;4:619417-619883;4:6271577-6304992;4:6279184-6279434;4:629670-670728;4:646966-664571;4:647642-648677;4:651220-652826;4:652722-656427;4:652742-656407;4:6576916-6625089;4:660321-661795;4:664193-671649;4:72448-2110334;4:72448-2327204;4:72448-2691306;4:72448-3208040;4:72448-3563382;4:72448-3725774;4:72448-3787112;4:72448-4360445;4:72448-4889835;4:72448-5036718;4:72448-5214111;4:72448-5346537;4:72448-6245152;4:72448-7831152;4:75743-8672411;4:778745-819917;4:78471-3364946;4:8271481-8308825;4:85041-1921232;4:85041-2010262;4:85041-4407509;4:85041-7065426;4:85041-7845343;4:8613755-8873340;4:8868774-8873565;4:980776-981040;4:980776-981747;4:990308-992083;4:990309-992082;4:993498-998345;4:994391-998355;4:996510-998192;4:996511-998191;4:996511-998355\t\t\t\t\t\t\tdbVar:nssv15165478;dbVar:nssv15148693;dbVar:nssv15149137;dbVar:nssv15125120;dbVar:nssv15134956;dbVar:nssv15136789;dbVar:nssv15148117;dbVar:nssv15165480;dbVar:nssv15164282;dbVar:nssv15164281;dbVar:nssv16215300;dbVar:nssv15145847;dbVar:nssv15132087;dbVar:nssv15132302;dbVar:nssv16254944;dbVar:nssv16207938;dbVar:nssv18830986;dbVar:nssv15150724;dbVar:nssv15777261;dbVar:nssv15151365;nssv18326348;dbVar:nssv15150634;dbVar:nssv15142189;dbVar:nssv15149870;nssv15151360;dbVar:nssv17649922;dbVar:nssv15147407;dbVar:nssv15146379;dbVar:nssv15146614;dbVar:nssv15148043;dbVar:nssv15146983;dbVar:nssv15146984;dbVar:nssv17976755;dbVar:nssv18841857;dbVar:nssv18841859;dbVar:nssv15164312;dbVar:nssv18841858;dbVar:nssv15149115\t4:11526-191028879;4:12441-190904441;4:12441-49064044;4:33575-6632513;4:36425-1583294;4:36425-4098729;4:36425-47493612;4:49451-190915650;4:49451-190963766;4:49451-46339070;4:49451-49620898;4:51414-17799819;4:51414-3776843;4:51414-8224525;4:68346-2503033;4:68346-27423424;4:68346-34512694;4:68346-3713599;4:68346-4051616;4:68346-49089361;4:68346-66440622;4:68346-8731855;4:68347-190957473;4:69672-29702595;4:72448-21024037;4:72448-33132242;4:72448-39478764;4:78471-15627196;4:85041-22451641;4:85041-38701987;4:114785-47569569;4:507006-49064194;4:507006-57939396;4:1356925-49659859;4:2906395-42965249;4:6447049-20490737\t4.87;4.87;18.96;99.42;97.73;99.14;19.60;4.87;4.87;20.09;18.76;52.40;99.46;99.75;99.87;34.00;27.00;99.91;99.92;18.97;14.01;99.96;4.87;31.38;44.38;28.13;23.60;59.76;41.52;24.05;19.51;18.25;15.43;16.59;16.14;20.82\t\t\tdbVar:nssv18330206;dbVar:nssv16254942;dbVar:nssv15140532;dbVar:nssv15129769;dbVar:nssv15124924;dbVar:nssv15139152;dbVar:nssv15136460;dbVar:nssv15138769;dbVar:nssv15136794;dbVar:nssv15139111;dbVar:nssv15145893;dbVar:nssv15145934;dbVar:nssv15134095;dbVar:nssv15147322;dbVar:nssv8639431;dbVar:nssv15164280;dbVar:nssv16208663;dbVar:nssv15123439;dbVar:nssv15135098;dbVar:nssv15146364;dbVar:nssv15121022;dbVar:nssv15119845;dbVar:nssv16207942;dbVar:nssv15151269;dbVar:nssv15149902;dbVar:nssv15146789;dbVar:nssv17976873;dbVar:nssv15151109;dbVar:nssv17957198;dbVar:nssv15137532;dbVar:nssv15148266;dbVar:nssv17956854;dbVar:nssv17976719;dbVar:nssv16254943;dbVar:nssv16207937;dbVar:nssv15152168;dbVar:nssv15141218;dbVar:nssv16254952;dbVar:nssv15150277;dbVar:nssv17976824;dbVar:nssv16254953;dbVar:nssv15139308;dbVar:nssv16207941;dbVar:nssv15138820;nssv16207940;dbVar:nssv16207939;dbVar:nssv18330137;dbVar:nssv18330792;dbVar:nssv17649921;dbVar:nssv15150501;dbVar:nssv15146961;dbVar:nssv15146716;dbVar:nssv15147405;dbVar:nssv15146665;dbVar:nssv15146669;dbVar:nssv15146272;dbVar:nssv15146661;dbVar:nssv15146276;dbVar:nssv15774427;dbVar:nssv15151369;dbVar:nssv15145981;dbVar:nssv16207944\t4:2-12785001;4:2-1328868;4:29215-1925508;4:33575-2356516;4:33575-4534781;4:36425-1957819;4:36425-3267258;4:36425-3883057;4:36425-3975771;4:36425-7361544;4:36425-9371067;4:37337-15870679;4:37337-3776839;4:37337-9370984;4:44021-19796182;4:49451-2010397;4:49451-24280482;4:49451-8872474;4:51414-1399150;4:56773-14501384;4:56773-2214932;4:56773-3872380;4:68346-10312798;4:68346-10336032;4:68346-13770107;4:68346-14614077;4:68346-1512353;4:68346-15973383;4:68346-1675143;4:68346-1999185;4:68346-20387231;4:68346-20587167;4:68346-20964575;4:68346-2137211;4:68346-2786584;4:68346-3891984;4:68346-4044985;4:68346-5046326;4:68346-5319773;4:68346-5579467;4:68346-5831521;4:68346-6056753;4:68346-6984507;4:68346-8731855;4:68346-9768141;4:68347-12369983;4:68347-2437290;4:68599-18912995;4:71553-15302739;4:71553-29006745;4:72448-10252290;4:72448-12900236;4:72448-15659658;4:72448-17279636;4:72448-28067931;4:78471-10337237;4:85041-17488365;4:3374196-13468480;4:4165335-33324781;4:4428131-17462172;4:5914110-17264668\t72.74;94.62;97.77;98.37;99.16;98.17;98.91;99.09;99.11;99.52;99.62;58.73;99.09;99.63;47.08;98.87;38.38;99.75;98.51;64.38;99.32;99.61;90.78;90.57;67.87;63.93;99.78;58.47;99.80;99.83;45.77;45.32;44.50;99.84;99.88;99.92;99.92;99.94;99.94;99.94;99.94;99.95;99.95;99.96;95.87;75.60;99.86;49.35;61.06;32.14;91.34;72.49;59.66;54.04;33.21;90.58;53.36;59.41;17.85;37.92;30.46\t1051\t4p_partial_monosomy_syndrome;Abnormality_of_the_nervous_system;Achondroplasia;Autosomal_dominant_nonsyndromic_hearing_loss;Autosomal_dominant_nonsyndromic_hearing_loss_6;Autosomal_recessive_retinitis_pigmentosa;BLOOD_GROUP,_EMM_SYSTEM;Bell-shaped_thorax;Bowed_humerus;Camptodactyly-tall_stature-scoliosis-hearing_loss_syndrome;Carcinoma_of_colon;Cataract_41;Cervical_cancer;Colorectal_cancer;Cone-rod_dystrophy;Congenital_Stationary_Night_Blindness,_Dominant;Congenital_myasthenic_syndrome;Congenital_myasthenic_syndrome_10;Congenital_stationary_night_blindness_autosomal_dominant_2;Connective_tissue_disorder;Coronal_craniosynostosis;Craniosynostosis_syndrome;Crouzon_syndrome;Crouzon_syndrome-acanthosis_nigricans_syndrome;Curry-Hall_syndrome;DOK7-related_disorder;Developmental_and_epileptic_encephalopathy,_63;Diabetes_mellitus;Disproportionate_short-limb_short_stature;EVC-related_disorder;EVC2-related_disorder;Ellis-van_Creveld_syndrome;Emm-null_phenotype;Epidermal_nevus;FGFR3-related_chondrodysplasia;FGFR3-related_disorder;Facial_asymmetry;Familial_hypokalemia-hypomagnesemia;Femoral_bowing;Fetal_akinesia_deformation_sequence_1;Fetal_akinesia_deformation_sequence_3;Fibrous_dysplasia_of_jaw;Generalized_non-motor_(absence)_seizure;Germ_cell_tumor_of_testis;Global_developmental_delay;Growth_delay;Hamartoma;Huntington_disease;Hurler_syndrome;Hypochondroplasia;Hypoplastic_enamel-onycholysis-hypohidrosis_syndrome;Hypotonia,_ataxia,_developmental_delay,_and_tooth_enamel_defect_syndrome;IDUA-related_core_myopathy;IDUA-related_disorder;Inborn_genetic_diseases;Infantile_axial_hypotonia;Intellectual_disability,_autosomal_recessive_53;Interstitial_pneumonitis;Isolated_microphthalmia_6;Jeune_thoracic_dystrophy;LADD_syndrome_1;Lacrimoauriculodentodigital_syndrome_2;Larsen_syndrome;Leber_congenital_amaurosis;Lethal_short-limbed_short_stature;Levy-Hollister_syndrome;Lower_limb_undergrowth;MSX1-related_disorder;Malignant_tumor_of_testis;Malignant_tumor_of_urinary_bladder;Meniere_disease;Mucopolysaccharidosis;Mucopolysaccharidosis,_MPS-I-H/S;Mucopolysaccharidosis,_MPS-I-S;Mucopolysaccharidosis,_MPS-IV-A;Mucopolysaccharidosis_type_1;Muenke_syndrome;Multiple_myeloma;Myopia_23,_autosomal_recessive;NSD2-related_disorder;Narrow_chest;Neurodevelopmental_delay;Nonsyndromic_genetic_hearing_loss;Optic_atrophy;PDE6B-related_disorder;PIGG-related_disorder;Rare_genetic_deafness;Rauch-Steindl_syndrome;Retinal_dystrophy;Retinitis_pigmentosa;Retinitis_pigmentosa_40;Rett_syndrome;SH3BP2-related_disorder;Saethre-Chotzen_syndrome;Seborrheic_keratosis;See_cases;Seizure;Severe_achondroplasia-developmental_delay-acanthosis_nigricans_syndrome;Short-rib_thoracic_dysplasia_6_with_or_without_polydactyly;Short_ribs;Short_stature;Skeletal_dysplasia;Skeletal_dysplasia_with_acanthosis_nigricans;Small_for_gestational_age;Smith-Magenis_Syndrome-like;Spermatocytic_seminoma;Squamous_cell_lung_carcinoma;Syndromic_intellectual_disability;Thanatophoric_dysplasia;Thanatophoric_dysplasia,_type_2;Thanatophoric_dysplasia_type_1;Tooth_agenesis,_selective,_1;Type_2_diabetes_mellitus;Type_IV_short_rib_polydactyly_syndrome;Tyrosinase-positive_oculocutaneous_albinism;Unilateral_renal_agenesis;Upper_limb_undergrowth;WFS1-Related_Spectrum_Disorders;WFS1-related_disorder;WFS1-spectrum_disorder;Wolf-Hirschhorn_like_syndrome;Wolfram-like_syndrome;Wolfram_syndrome;Wolfram_syndrome_1;not_specified\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t4:73133-74170 gnomAD-SV_v2.1_DUP_4_10814;4:401040-401369 1000g;4:672926-673080 IMH;4:708497-709963 IMH;4:926067-926498 DDD:12703;4:1019871-1020098 IMH;4:1140854-1142502 IMH;4:1276634-1277595 IMH;4:1366480-1366685 IMH;4:1498576-1499359 IMH;4:2338395-2338550 IMH;4:2804337-2804397 gnomAD-SV_v2.1_DUP_4_10976;4:3059771-3069815 IMH;4:3060202-3069689 1000g;4:3331379-3331542 IMH;4:3446698-3451946 esv3599430;4:3467435-3474409 dgv972e214;4:3467915-3474537 IMH;4:3805045-3805107 gnomAD-SV_v2.1_DUP_4_11034;4:3970050-4129749 DDD:12785...\t4:12282-121562 esv2763806;4:138871-148818 1000g;4:548827-549483 IMH;4:672946-673060 gnomAD-SV_v2.1_DUP_4_10858;4:897767-898589 IMH;4:970627-980630 dgv1450e212;4:1048391-1049187 IMH;4:1276082-1277452 IMH;4:1310419-1311557 IMH;4:1388217-1388850 IMH;4:1526044-1526309 IMH;4:2338396-2338717 IMH;4:3057000-3066000 gnomAD-SV_v2.1_DUP_4_10988;4:3059780-3069806 gnomAD-SV_v2.1_DUP_4_10989;4:3331378-3331542 gnomAD-SV_v2.1_DUP_4_10996;4:3446698-3451946 1000g;4:3467435-3474409 1000g;4:3467914-3474537 gnomAD-SV_v2.1_DUP_4_11003;4:3477856-3478071 IMH;4:3816480-3816984 IMH...\t\t\tchr4:69000-224200 dbVar;chr4:90243-101974 dbVar;chr4:90308-102025 dbVar;4:91367-96776 1000g;chr4:114840-117344 dbVar;chr4:120580-120638 dbVar;chr4:127000-307000 dbVar;chr4:138218-138889 dbVar;chr4:141289-187522 dbVar;chr4:144992-145089 dbVar;chr4:154845-154912 dbVar;chr4:160511-164534 dbVar;chr4:194252-194740 dbVar;chr4:198780-199558 dbVar;chr4:212942-226976 dbVar;chr4:237038-239475 dbVar;chr4:244793-248873 dbVar;chr4:249822-249919 dbVar;chr4:260746-265323 dbVar;4:263958-264238 esv2665266...\tchr4:67914-130131 dbVar;chr4:72279-204237 dbVar;4:90244-101974 1000g;chr4:91366-96776 dbVar;chr4:91373-96776 dbVar;chr4:119685-128703 dbVar;chr4:126571-135658 dbVar;chr4:128533-168126 dbVar;chr4:138870-148818 dbVar;chr4:141363-187545 dbVar;chr4:152769-183508 dbVar;4:156233-158501 nsv515005;chr4:160901-161000 dbVar;chr4:198668-199069 dbVar;4:209407-209857 DDD:12676;chr4:231372-238511 dbVar;chr4:244791-248846 dbVar;4:244794-248873 1000g;chr4:260724-264299 dbVar;chr4:260949-261120 dbVar...\t0.445\t0.425\t\t\t4:9370857-9371011\tMER5B\t\t\t\t4:9357712-9469143;4:9357889-9408758;4:9357889-9408758;4:9362634-9457876\t\t\t4:9199301-9371400\tHigh Signal Region\t\t3\t\t\t1.29231994213647\t1.20702378077388\t1.11611247300207\t3.21047317301589\t5.41905620095129\t\t\t\t\t\t\t194648;616918;180072;605032;610130;252800;612041;602618;614632;134934;604407;602952;610647;602104;102680;613004;610285;104225;142983;607261;604831;606201;618899;142992\t\t\tyes\tyes\t0\t1.0000e+00\t1.0000e+00\t1.9\t1A (cf Gene_count, RE_gene, +0.00);2A (cf P_loss_source, +1.00);3C (155 genes, +0.90);5F (+0.00)\t5\n4_71553_9371067_DEL_1\t4\t71553\t9371067\t-9299515\tDEL\t4p- syndrom\tPathogenic\tNA\tsplit\tp16.3\tZNF595\t\t\t\tNM_001286052\t2\t53214\t88096\t16544\t1709\t92\tyes\t8\tintron2-txEnd\tCDS-3'UTR\t12103\t5'\t71552\t88096\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tesv2763806\t4:12282-121562\t0.0100\tdbVar\tchr4:67914-130131;chr4:69000-224200\t0.01\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t93\t\t\t\t-2.08573739588537\t-0.684191486481177\t\t\t\t\t152687\tHGNC:27196\t\t\t\t\t\t6\t3.0550e-01\t1.7753e-05\t\t\tfull=5\n4_71553_9371067_DEL_1\t4\t71553\t9371067\t-9299515\tDEL\t4p- syndrom\tPathogenic\tNA\tsplit\tp16.3\tZNF718\t\t\t\tNM_001039127\t6\t124382\t157952\t33570\t1239\t100\tno\t6\ttxStart-txEnd\t5'UTR-3'UTR\t\t\t124382\t157952\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tdbVar\tchr4:69000-224200;chr4:72279-204237\t0.01\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t255403\tHGNC:26889\t\t\t\t\t\t\t\t\t\t\tfull=5\n4_71553_9371067_DEL_1\t4\t71553\t9371067\t-9299515\tDEL\t4p- syndrom\tPathogenic\tNA\tsplit\tp16.3\tZNF876P\t\t\t\tNR_027481\t1\t206388\t249774\t43386\t0\t0\tNA\t2\ttxStart-txEnd\tUTR\t\t\t206388\t249774\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tdbVar\tchr4:127000-307000\t0.01\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t642280\tHGNC:32472\t\t\t\t\t\t\t\t\t\t\tfull=5\n4_71553_9371067_DEL_1\t4\t71553\t9371067\t-9299515\tDEL\t4p- syndrom\tPathogenic\tNA\tsplit\tp16.3\tZNF732\t\t\t\tNM_001137608\t3\t264463\t299263\t34800\t1758\t100\tno\t4\ttxStart-txEnd\t5'UTR-3'UTR\t\t\t264463\t299263\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tdbVar\tchr4:127000-307000\t0.01\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t90.28\t0.287750339613682\t0.450417704041247\t0.400052517453145\t-1.34614550091757\t-3.06736199452323\t\t\t\t\t654254\tHGNC:37138\t\t\t\t\t\t7\t9.8159e-02\t1.3118e-09\t\t\tfull=5\n4_71553_9371067_DEL_1\t4\t71553\t9371067\t-9299515\tDEL\t4p- syndrom\tPathogenic\tNA\tsplit\tp16.3\tZNF141\t\t\t\tNM_003441\t4\t331602\t378657\t47055\t1425\t100\tno\t4\ttxStart-txEnd\t5'UTR-3'UTR\t\t\t331602\t378657\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t30\t\t89.36\t-0.117374836114298\t-1.63248668554434\t-1.22454087327741\t0.724425471954094\t-0.520531332003985\tpolydactyly, postaxial, type A6;postaxial polydactyly type A\tAR\tLimited;Supportive\t23160277;26394607[PMID]_23160277[PMID]\t7700\tHGNC:12926\t194648\t?Polydactyly, postaxial, type A6, 615226 (3) AR\tAR\t\tyes\t7\t1.0393e-01\t1.6189e-01\t\t\tfull=5\n4_71553_9371067_DEL_1\t4\t71553\t9371067\t-9299515\tDEL\t4p- syndrom\tPathogenic\tNA\tsplit\tp16.3\tMIR571\t\t\t\tNR_030297\t1\t343945\t344041\t96\t0\t0\tNA\t1\ttxStart-txEnd\tUTR\t\t\t343945\t344041\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tdbVar\tchr4:325395-351492\t0.01\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t693156\tHGNC:32827\t\t\t\t\t\t\t\t\t\t\tfull=5\n4_71553_9371067_DEL_1\t4\t71553\t9371067\t-9299515\tDEL\t4p- syndrom\tPathogenic\tNA\tsplit\tp16.3\tABCA11P\t\t\t\tNR_002451\t2\t419223\t467998\t48775\t0\t0\tNA\t3\ttxStart-txEnd\tUTR\t\t\t419223\t467998\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t79963\tHGNC:31\t\t\t\t\t\t\t\t\t\t\tfull=5\n4_71553_9371067_DEL_1\t4\t71553\t9371067\t-9299515\tDEL\t4p- syndrom\tPathogenic\tNA\tsplit\tp16.3\tZNF721\t\t\t\tNM_133474\t4\t433776\t492945\t59169\t2772\t100\tno\t3\ttxStart-txEnd\t5'UTR-3'UTR\t\t\t433776\t492945\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t96.95\t\t\t\t-1.7693057852588\t-2.76319865584382\t\t\t\t\t170960\tHGNC:29425\t\t\t\t\t\t9\t9.4789e-02\t5.9729e-11\t\t\tfull=5\n4_71553_9371067_DEL_1\t4\t71553\t9371067\t-9299515\tDEL\t4p- syndrom\tPathogenic\tNA\tsplit\tp16.3\tPIGG\t\t\t\tNM_001127178\t3\t492998\t533989\t40991\t2952\t100\tno\t13\ttxStart-txEnd\t5'UTR-3'UTR\t\t\t492998\t533989\t\t\t\t\t\tNeurodevelopmental disorder with or without hypotonia, seizures, and cerebellar atrophy, 616917 (3) AR;Blood group, EMM system, 619812 (3) AR\t\tdbVar:nssv17683620;dbVar:nssv17974578;dbVar:nssv17976464;dbVar:nssv17976477;dbVar:nssv18791534;dbVar:nssv18791536;dbVar:nssv18791537;dbVar:nssv18791538;morbid:PIGG\t4:492999-533989;4:493969-499930;4:494166-494410;4:499508-502759;4:501175-533158;4:502599-509994;4:509743-533158;4:512203-518547;4:524206-527790\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t61\tBLOOD_GROUP,_EMM_SYSTEM;Emm-null_phenotype;Inborn_genetic_diseases;Intellectual_disability,_autosomal_recessive_53;PIGG-related_disorder\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t73.18\t0.208571775574472\t-1.00399823985698\t-0.667367098831187\t1.49327706340249\t-0.0905757042419409\tintellectual disability, autosomal recessive 53\tAR\tDefinitive;Strong\t26996948;28581210;28771251\t54872\tHGNC:25985\t616918\tNeurodevelopmental disorder with or without hypotonia, seizures, and cerebellar atrophy, 616917 (3) AR;[Blood group, EMM system], 619812 (3) AR\tAR\tyes\t\t5\t5.4258e-15\t8.7751e-07\t\t\tfull=5\n4_71553_9371067_DEL_1\t4\t71553\t9371067\t-9299515\tDEL\t4p- syndrom\tPathogenic\tNA\tsplit\tp16.3\tTMEM271\t\t\t\tNM_001362796\t2\t567668\t570084\t2416\t1158\t83\tno\t1\ttxStart-txEnd\t5'UTR-3'UTR\t\t\t567668\t570084\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t112441426\tHGNC:53639\t\t\t\t\t\t\t\t\t\t\tfull=5\n4_71553_9371067_DEL_1\t4\t71553\t9371067\t-9299515\tDEL\t4p- syndrom\tPathogenic\tNA\tsplit\tp16.3\tLOC105374338\t\t\t\tNR_148199\t1\t570956\t578655\t7699\t0\t0\tNA\t3\ttxStart-txEnd\tUTR\t\t\t570956\t578655\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tfull=5\n4_71553_9371067_DEL_1\t4\t71553\t9371067\t-9299515\tDEL\t4p- syndrom\tPathogenic\tNA\tsplit\tp16.3\tPDE6B\t\t\t\tNM_000283\t4\t619361\t664571\t45210\t2565\t100\tno\t22\ttxStart-txEnd\t5'UTR-3'UTR\t\t\t619361\t664571\t\tRetinitis_pigmentosa_40;Retinitis_pigmentosa|Retinitis_pigmentosa_40\tHP:0000547\tCLN:28147;CLN:801370;dbVar:nssv15161020\t4:619584-619584;4:619584-619655;4:619590-619662\tNight blindness, congenital stationary, AD 2, 163500 (3) AD;Retinitis pigmentosa-40, 613801 (3) AR\t\tdbVar:nssv16213572;dbVar:nssv16213637;dbVar:nssv17171376;dbVar:nssv17171923;dbVar:nssv18788927;dbVar:nssv18788928;morbid:PDE6B\t4:619417-619883;4:646966-664571;4:647642-648677;4:651220-652826;4:652722-656427;4:652742-656407;4:660321-661795\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t96\tAutosomal_recessive_retinitis_pigmentosa;Cone-rod_dystrophy;Congenital_Stationary_Night_Blindness,_Dominant;Congenital_stationary_night_blindness_autosomal_dominant_2;Leber_congenital_amaurosis;PDE6B-related_disorder;Retinal_dystrophy;Retinitis_pigmentosa;Retinitis_pigmentosa_40;See_cases;Tyrosinase-positive_oculocutaneous_albinism\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t31.26\t-1.62508422066579\t-0.147567114346182\t-0.732640703348332\t-0.18186725937295\t-0.360251650665831\tcongenital stationary night blindness;congenital stationary night blindness autosomal dominant 2;retinitis pigmentosa;retinitis pigmentosa 40\tAD;AR\tDefinitive;Limited;Strong;Supportive\t12641462;17044014;19578023;20301590[PMID];22334370;22968130;24265693;24760071;24938718;25472526;26667666;28559085;30646425;8075643;8075643[PMID];8394174;8595886\t5158\tHGNC:8786\t180072\tNight blindness, congenital stationary, AD 2, 163500 (3) AD;Retinitis pigmentosa-40, 613801 (3) AR\tAD;AR\tyes\t\t6\t2.6155e-27\t1.6257e-13\t\t\tfull=5\n4_71553_9371067_DEL_1\t4\t71553\t9371067\t-9299515\tDEL\t4p- syndrom\tPathogenic\tNA\tsplit\tp16.3\tPDE6B-AS1\t\t\t\tNR_183810\t1\t646693\t648989\t2296\t0\t0\tNA\t3\ttxStart-txEnd\tUTR\t\t\t646693\t648989\t\t\t\t\t\t\t\tdbVar:nssv17171376\t4:647642-648677\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t12\tAutosomal_recessive_retinitis_pigmentosa;Congenital_stationary_night_blindness_autosomal_dominant_2;Leber_congenital_amaurosis;Retinal_dystrophy;Retinitis_pigmentosa;Retinitis_pigmentosa_40;See_cases\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t101928521\tHGNC:40438\t\t\t\t\t\t\t\t\t\t\tfull=5\n4_71553_9371067_DEL_1\t4\t71553\t9371067\t-9299515\tDEL\t4p- syndrom\tPathogenic\tNA\tsplit\tp16.3\tATP5ME\t\t\t\tNM_007100\t4\t666224\t668065\t1841\t210\t100\tno\t4\ttxStart-txEnd\t5'UTR-3'UTR\t\t\t666224\t668065\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t521\tHGNC:846\t\t\t\t\t\t\t\t\t\t\tfull=5\n4_71553_9371067_DEL_1\t4\t71553\t9371067\t-9299515\tDEL\t4p- syndrom\tPathogenic\tNA\tsplit\tp16.3\tMYL5\t\t\t\tNM_001395441\t1\t668330\t675817\t7487\t522\t100\tno\t9\ttxStart-txEnd\t5'UTR-3'UTR\t\t\t668330\t675817\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t77.92\t-2.62354415217069\t-2.53125239294469\t-2.47162789907313\t-0.841325117744977\t-1.07172517579562\t\t\t\t\t4636\tHGNC:7586\t\t\t\t\t\t9\t8.4023e-14\t4.4299e-08\t\t\tfull=5\n4_71553_9371067_DEL_1\t4\t71553\t9371067\t-9299515\tDEL\t4p- syndrom\tPathogenic\tNA\tsplit\tp16.3\tSLC49A3\t\t\t\tNM_001294341\t2\t675617\t682940\t7323\t1683\t100\tno\t10\ttxStart-txEnd\t5'UTR-3'UTR\t\t\t675617\t682940\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t84179\tHGNC:26177\t\t\t\t\t\t\t\t\t\t\tfull=5\n4_71553_9371067_DEL_1\t4\t71553\t9371067\t-9299515\tDEL\t4p- syndrom\tPathogenic\tNA\tsplit\tp16.3\tPCGF3\t\t\t\tNM_001317836\t3\t699620\t763877\t64257\t729\t100\tno\t12\ttxStart-txEnd\t5'UTR-3'UTR\t\t\t699620\t763877\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t41.81\t1.08104400698142\t0.21167380707342\t0.50450224433182\t-1.15521787576548\t2.22110482517757\t\t\t\t\t10336\tHGNC:10066\t\t\t\t\t\t1\t9.5326e-01\t9.4340e-01\t\t\tfull=5\n4_71553_9371067_DEL_1\t4\t71553\t9371067\t-9299515\tDEL\t4p- syndrom\tPathogenic\tNA\tsplit\tp16.3\tPCGF3-AS1\t\t\t\tNR_171661\t1\t754230\t775637\t21407\t0\t0\tNA\t3\ttxStart-txEnd\tUTR\t\t\t754230\t775637\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t100129917\tHGNC:56108\t\t\t\t\t\t\t\t\t\t\tfull=5\n4_71553_9371067_DEL_1\t4\t71553\t9371067\t-9299515\tDEL\t4p- syndrom\tPathogenic\tNA\tsplit\tp16.3\tCPLX1\t\t\t\tNM_006651\t4\t778744\t819917\t41173\t405\t100\tno\t4\ttxStart-txEnd\t5'UTR-3'UTR\t\t\t778744\t819917\t\t\t\t\t\tDevelopmental and epileptic encephalopathy 63, 617976 (3) AR\t\tmorbid:CPLX1\t4:778745-819917\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t1\tDevelopmental_and_epileptic_encephalopathy,_63\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t57.56\t0.307891021887021\t-0.276081088005473\t-0.0592308346427654\t-0.123982055433658\t0.739036799993362\tdevelopmental and epileptic encephalopathy, 63;familial infantile myoclonic epilepsy\tAR\tStrong;Supportive\t11163241;26539891;28422131;28422131[PMID]\t10815\tHGNC:2309\t605032\tDevelopmental and epileptic encephalopathy 63, 617976 (3) AR\tAR\tyes\t\t2\t8.2499e-01\t7.9579e-01\t\t\tfull=5\n4_71553_9371067_DEL_1\t4\t71553\t9371067\t-9299515\tDEL\t4p- syndrom\tPathogenic\tNA\tsplit\tp16.3\tGAK\t\t\t\tNM_005255\t4\t843064\t926104\t83040\t3936\t100\tno\t28\ttxStart-txEnd\t5'UTR-3'UTR\t\t\t843064\t926104\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t66.55\t1.00920516918233\t-1.32268830826731\t-0.753758448502777\t-1.09712093422474\t-0.06853474623291\t\t\t\t\t2580\tHGNC:4113\t\t\t\t\t\t1\t5.1818e-03\t9.7313e-01\t\t\tfull=5\n4_71553_9371067_DEL_1\t4\t71553\t9371067\t-9299515\tDEL\t4p- syndrom\tPathogenic\tNA\tsplit\tp16.3\tTMEM175\t\t\t\tNM_032326\t4\t926247\t952444\t26197\t1515\t100\tno\t11\ttxStart-txEnd\t5'UTR-3'UTR\t\t\t926247\t952444\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t72.33\t0.68130369659025\t-0.684900012122083\t-0.281672783681246\t-0.335178666431938\t-0.288196719712539\t\t\t\t\t84286\tHGNC:28709\t\t\t\t\t\t6\t3.0549e-09\t4.3963e-04\t\t\tfull=5\n4_71553_9371067_DEL_1\t4\t71553\t9371067\t-9299515\tDEL\t4p- syndrom\tPathogenic\tNA\tsplit\tp16.3\tDGKQ\t\t\t\tNM_001347\t4\t952674\t967357\t14683\t2829\t100\tno\t23\ttxStart-txEnd\t5'UTR-3'UTR\t\t\t952674\t967357\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t68.02\t0.720690705407562\t-0.962987167732907\t-0.540807434627598\t-0.885541042446365\t0.113301977907898\t\t\t\t\t1609\tHGNC:2856\t\t\t\t\t\t3\t1.7603e-09\t1.1940e-03\t\t\tfull=5\n4_71553_9371067_DEL_1\t4\t71553\t9371067\t-9299515\tDEL\t4p- syndrom\tPathogenic\tNA\tsplit\tp16.3\tSLC26A1\t\t\t\tNM_022042\t4\t981444\t987192\t5748\t2106\t100\tno\t3\ttxStart-txEnd\t5'UTR-3'UTR\t\t\t981444\t987192\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t21\tHurler_syndrome;IDUA-related_disorder;Interstitial_pneumonitis;Mucopolysaccharidosis;Mucopolysaccharidosis,_MPS-I-H/S;Mucopolysaccharidosis,_MPS-I-S;Mucopolysaccharidosis_type_1;See_cases\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t74.45\t0.0296456908307138\t-0.811800830743971\t-0.614175007315312\t-0.960716353370505\t-0.560975494729554\tnephrolithiasis susceptibility caused by SLC26A1\tAR\tLimited;Moderate\t24250268;27210743\t10861\tHGNC:10993\t610130\t?Hypersulfaturia, 620372 (3) AR;?Nephrolithiasis, calcium oxalate, 1, 167030 (3) AR\tAR\t\tyes\t8\t1.0564e-11\t4.0130e-06\t\t\tfull=5\n4_71553_9371067_DEL_1\t4\t71553\t9371067\t-9299515\tDEL\t4p- syndrom\tPathogenic\tNA\tsplit\tp16.3\tIDUA\t\t\t\tNM_000203\t5\t980831\t998352\t17521\t1962\t100\tno\t14\ttxStart-txEnd\t5'UTR-3'UTR\t\t\t980831\t998352\t\t\t\t\t\tHurler_syndrome;Mucopolysaccharidosis Ih, 607014 (3) AR;Mucopolysaccharidosis Ih;s, 607015 (3) AR;Mucopolysaccharidosis Is, 607016 (3) AR;Mucopolysaccharidosis_type_1\t\tCLN:2672009;CLN:961843;dbVar:nssv16216714;dbVar:nssv18830727;morbid:IDUA\t4:990308-992083;4:990309-992082;4:993498-998345;4:996510-998192;4:996511-998191\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t213\tFamilial_hypokalemia-hypomagnesemia;Hurler_syndrome;IDUA-related_core_myopathy;IDUA-related_disorder;Inborn_genetic_diseases;Interstitial_pneumonitis;Mucopolysaccharidosis;Mucopolysaccharidosis,_MPS-I-H/S;Mucopolysaccharidosis,_MPS-I-S;Mucopolysaccharidosis,_MPS-IV-A;Mucopolysaccharidosis_type_1;See_cases\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t30\t\t69.73\t-1.6058292542185\t-1.19882139820352\t-1.40825779214199\t-0.0473365386141676\t0.337473103766752\tHurler syndrome;Hurler-Scheie syndrome;Scheie syndrome;mucopolysaccharidosis type 1\tAR\tDefinitive;Strong;Supportive\t11735025;21394825;21480867;22976768;23917744;8680403[PMID]\t3425\tHGNC:5391\t252800\tMucopolysaccharidosis Ih, 607014 (3) AR;Mucopolysaccharidosis Ih/s, 607015 (3) AR;Mucopolysaccharidosis Is, 607016 (3) AR\tAR\tyes\t\t6\t3.7599e-13\t2.6418e-08\t\t\tfull=5\n4_71553_9371067_DEL_1\t4\t71553\t9371067\t-9299515\tDEL\t4p- syndrom\tPathogenic\tNA\tsplit\tp16.3\tFGFRL1\t\t\t\tNM_001004356\t3\t1005413\t1020686\t15273\t1515\t100\tno\t7\ttxStart-txEnd\t5'UTR-3'UTR\t\t\t1005413\t1020686\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tdbVar\tchr4:993000-1180000\t0.01\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t0\t0\t61.34\t0.15762668797229\t-0.095835364724166\t0.0269779205648351\t-1.06125182633592\t-0.304110728864919\t\t\t\t\t53834\tHGNC:3693\t\t\t\t\t\t3\t1.1908e-02\t5.8219e-01\t\t\tfull=5\n4_71553_9371067_DEL_1\t4\t71553\t9371067\t-9299515\tDEL\t4p- syndrom\tPathogenic\tNA\tsplit\tp16.3\tRNF212\t\t\t\tNM_001131034\t4\t1065265\t1107352\t42087\t894\t100\tno\t10\ttxStart-txEnd\t5'UTR-3'UTR\t\t\t1065265\t1107352\t\t\t\t\t\t?Spermatogenic failure 62, 619673 (3) AR;Recombination rate QTL 1, 612042 (3)\t\tmorbid:RNF212\t4:1087097-1107352\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tdbVar\tchr4:993000-1180000\t0.01\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t88.48\t-1.10887487197032\t-0.266612828851805\t-0.582493556461374\t0.70441463212366\t-0.142173437306223\tspermatogenic failure 62\tAR\tLimited\t25342176;31125047\t285498\tHGNC:27729\t612041\t?Spermatogenic failure 62, 619673 (3) AR;Recombination rate QTL 1, 612042 (3)\tAR\tyes\tyes\t4\t1.5645e-03\t1.2523e-01\t\t\tfull=5\n4_71553_9371067_DEL_1\t4\t71553\t9371067\t-9299515\tDEL\t4p- syndrom\tPathogenic\tNA\tsplit\tp16.3\tLOC105374344\t\t\t\tNR_134676\t1\t1107426\t1126763\t19337\t0\t0\tNA\t3\ttxStart-txEnd\tUTR\t\t\t1107426\t1126763\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tdbVar\tchr4:993000-1180000\t0.01\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tfull=5\n4_71553_9371067_DEL_1\t4\t71553\t9371067\t-9299515\tDEL\t4p- syndrom\tPathogenic\tNA\tsplit\tp16.3\tTMED11P\t\t\t\tNR_033768\t1\t1108984\t1116952\t7968\t0\t0\tNA\t4\ttxStart-txEnd\tUTR\t\t\t1108984\t1116952\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tdbVar\tchr4:993000-1180000\t0.01\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tfull=5\n4_71553_9371067_DEL_1\t4\t71553\t9371067\t-9299515\tDEL\t4p- syndrom\tPathogenic\tNA\tsplit\tp16.3\tSPON2\t\t\t\tNM_001199021\t2\t1160719\t1202632\t41913\t996\t100\tno\t8\ttxStart-txEnd\t5'UTR-3'UTR\t\t\t1160719\t1202632\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t77.93\t0.386184284132793\t-0.507819648222944\t-0.233252267365632\t0.982292085246316\t0.77606556285772\t\t\t\t\t10417\tHGNC:11253\t\t\t\t\t\t9\t2.6609e-15\t1.0881e-06\t\t\tfull=5\n4_71553_9371067_DEL_1\t4\t71553\t9371067\t-9299515\tDEL\t4p- syndrom\tPathogenic\tNA\tsplit\tp16.3\tLOC100130872\t\t\t\tNR_024569\t1\t1189570\t1202750\t13180\t0\t0\tNA\t4\ttxStart-txEnd\tUTR\t\t\t1189570\t1202750\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tfull=5\n4_71553_9371067_DEL_1\t4\t71553\t9371067\t-9299515\tDEL\t4p- syndrom\tPathogenic\tNA\tsplit\tp16.3\tCTBP1-AS\t\t\t\tNR_104331\t1\t1203907\t1212379\t8472\t0\t0\tNA\t6\ttxStart-txEnd\tUTR\t\t\t1203907\t1212379\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t1\tHypotonia,_ataxia,_developmental_delay,_and_tooth_enamel_defect_syndrome;Inborn_genetic_diseases\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t285463\tHGNC:48337\t\t\t\t\t\t\t\t\t\t\tfull=5\n4_71553_9371067_DEL_1\t4\t71553\t9371067\t-9299515\tDEL\t4p- syndrom\tPathogenic\tNA\tsplit\tp16.3\tCTBP1\t\t\t\tNM_001377186\t1\t1205232\t1242918\t37686\t1326\t100\tno\t9\ttxStart-txEnd\t5'UTR-3'UTR\t\t\t1205232\t1242918\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t1\tHypotonia,_ataxia,_developmental_delay,_and_tooth_enamel_defect_syndrome;Inborn_genetic_diseases\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t30.46\t0.372261467334061\t-0.687680790971782\t-0.398820302991302\t-0.219318263143712\t4.00265992091985\thypotonia, ataxia, developmental delay, and tooth enamel defect syndrome\tAD\tStrong\t12101226;26480814;27094857;28408745;28955726;30356033;31041561;32075774;36341169;9524128\t1487\tHGNC:2494\t602618\tHypotonia, ataxia, developmental delay, and tooth enamel defect syndrome, 617915 (3) AD\tAD\tyes\t\t1\t9.8442e-01\t9.7976e-01\t\t\tfull=5\n4_71553_9371067_DEL_1\t4\t71553\t9371067\t-9299515\tDEL\t4p- syndrom\tPathogenic\tNA\tsplit\tp16.3\tCTBP1-DT\t\t\t\tNR_033339\t1\t1243227\t1246795\t3568\t0\t0\tNA\t2\ttxStart-txEnd\tUTR\t\t\t1243227\t1246795\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t92070\tHGNC:28307\t\t\t\t\t\t\t\t\t\t\tfull=5\n4_71553_9371067_DEL_1\t4\t71553\t9371067\t-9299515\tDEL\t4p- syndrom\tPathogenic\tNA\tsplit\tp16.3\tMAEA\t\t\t\tNM_001017405\t3\t1283678\t1333925\t50247\t1191\t100\tno\t9\ttxStart-txEnd\t5'UTR-3'UTR\t\t\t1283678\t1333925\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t7.13\t0.506320833777115\t-1.33825481458672\t-0.894129278429717\t-0.194585519191658\t3.59552380294204\t\t\t\t\t10296\tHGNC:13731\t\t\t\t\t\t2\t2.2741e-01\t8.4486e-01\t\t\tfull=5\n4_71553_9371067_DEL_1\t4\t71553\t9371067\t-9299515\tDEL\t4p- syndrom\tPathogenic\tNA\tsplit\tp16.3\tUVSSA\t\t\t\tNM_001317934\t2\t1340995\t1381837\t40842\t2130\t100\tno\t14\ttxStart-txEnd\t5'UTR-3'UTR\t\t\t1340995\t1381837\t\t\t\t\t\tUV-sensitive syndrome 3, 614640 (3) AR\t\tmorbid:UVSSA\t4:1340996-1381837\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t2\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t30\t\t81.41\t\t\t\t-1.108132588085\t-3.07621828146639\tUV-sensitive syndrome;UV-sensitive syndrome 3\tAR\tStrong;Supportive\t22466610;22466610[PMID]_22466611[PMID]_22466612[PMID]\t57654\tHGNC:29304\t614632\tUV-sensitive syndrome 3, 614640 (3) AR\tAR\tyes\t\t7\t5.4127e-25\t8.8875e-14\t\t\tfull=5\n4_71553_9371067_DEL_1\t4\t71553\t9371067\t-9299515\tDEL\t4p- syndrom\tPathogenic\tNA\tsplit\tp16.3\tNKX1-1\t\t\t\tNM_001290079\t1\t1396719\t1400230\t3511\t1347\t100\tno\t2\ttxStart-txEnd\t5'UTR-3'UTR\t\t\t1396719\t1400230\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t80.2\t\t\t\t2.60422559153241\t2.66896012411798\t\t\t\t\t54729\tHGNC:24975\t\t\t\t\t\t3\t7.1465e-01\t1.8842e-01\t\t\tfull=5\n4_71553_9371067_DEL_1\t4\t71553\t9371067\t-9299515\tDEL\t4p- syndrom\tPathogenic\tNA\tsplit\tp16.3\tFAM53A\t\t\t\tNM_001174070\t3\t1641613\t1686040\t44427\t1197\t100\tno\t5\ttxStart-txEnd\t5'UTR-3'UTR\t\t\t1641613\t1686040\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t86.49\t\t\t\t-0.576730190868019\t-0.56780381579822\t\t\t\t\t152877\tHGNC:31860\t\t\t\t\t\t6\t3.5705e-03\t3.0070e-05\t\t\tfull=5\n4_71553_9371067_DEL_1\t4\t71553\t9371067\t-9299515\tDEL\t4p- syndrom\tPathogenic\tNA\tsplit\tp16.3\tSLBP\t\t\t\tNM_006527\t4\t1694457\t1714046\t19589\t813\t100\tno\t8\ttxStart-txEnd\t5'UTR-3'UTR\t\t\t1694457\t1714046\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tdbVar\tchr4:1663278-1724970\t0.01\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t41.08\t-0.996144409589105\t-0.44060461568473\t-0.660904930034766\t-0.443208130978936\t0.50373477013136\t\t\t\t\t7884\tHGNC:10904\t\t\t\t\t\t4\t6.8148e-02\t5.1566e-01\t\t\tfull=5\n4_71553_9371067_DEL_1\t4\t71553\t9371067\t-9299515\tDEL\t4p- syndrom\tPathogenic\tNA\tsplit\tp16.3\tTMEM129\t\t\t\tNM_001127266\t2\t1717678\t1723050\t5372\t1089\t100\tno\t4\ttxStart-txEnd\t5'UTR-3'UTR\t\t\t1717678\t1723050\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tdbVar\tchr4:1663278-1724970\t0.01\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t60.14\t\t\t\t1.8774465029651\t0.292414150336672\t\t\t\t\t92305\tHGNC:25137\t\t\t\t\t\t8\t2.3074e-11\t1.5746e-06\t\t\tfull=5\n4_71553_9371067_DEL_1\t4\t71553\t9371067\t-9299515\tDEL\t4p- syndrom\tPathogenic\tNA\tsplit\tp16.3\tTACC3\t\t\t\tNM_006342\t3\t1723247\t1746898\t23651\t2517\t100\tno\t16\ttxStart-txEnd\t5'UTR-3'UTR\t\t\t1723247\t1746898\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t92.5\t-0.738565549612952\t-1.04002887445022\t-0.98783763752124\t-1.00228696058413\t-1.35276544118498\t\t\t\t\t10460\tHGNC:11524\t\t\t\t\t\t3\t2.7082e-07\t9.1952e-02\t\t\tfull=5\n4_71553_9371067_DEL_1\t4\t71553\t9371067\t-9299515\tDEL\t4p- syndrom\tPathogenic\tNA\tsplit\tp16.3\tFGFR3\t\t\t\tNM_001163213\t2\t1795019\t1810594\t15575\t2427\t100\tno\t18\ttxStart-txEnd\t5'UTR-3'UTR\t\t\t1795019\t1810594\t\t\t\t\t\tAchondroplasia, 100800 (3) AD;Bladder cancer, somatic, 109800 (3);CATSHL syndrome, 610474 (3) AD,AR;Cervical cancer, somatic, 603956 (3);Colorectal cancer, somatic, 114500 (3);Crouzon syndrome with acanthosis nigricans, 612247 (3) AD;Hypochondroplasia, 146000 (3) AD;LADD syndrome 2, 620192 (3) AD;Muenke syndrome, 602849 (3) AD;Nevus, epidermal, somatic, 162900 (3);SADDAN, 616482 (3) AD;Spermatocytic seminoma, somatic, 273300 (3);Thanatophoric dysplasia, type I, 187600 (3) AD;Thanatophoric dysplasia, type II, 187601 (3) AD\t\tmorbid:FGFR3\t4:1795020-1810594\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t39\tAbnormality_of_the_nervous_system;Achondroplasia;Bell-shaped_thorax;Bowed_humerus;Camptodactyly-tall_stature-scoliosis-hearing_loss_syndrome;Carcinoma_of_colon;Cervical_cancer;Colorectal_cancer;Connective_tissue_disorder;Coronal_craniosynostosis;Craniosynostosis_syndrome;Crouzon_syndrome;Crouzon_syndrome-acanthosis_nigricans_syndrome;Disproportionate_short-limb_short_stature;Epidermal_nevus;FGFR3-related_chondrodysplasia;FGFR3-related_disorder;Facial_asymmetry;Femoral_bowing;Generalized_non-motor_(absence)_seizure;Germ_cell_tumor_of_testis;Growth_delay;Hamartoma;Hypochondroplasia;Inborn_genetic_diseases;Infantile_axial_hypotonia;LADD_syndrome_1;Lacrimoauriculodentodigital_syndrome_2;Larsen_syndrome;Lethal_short-limbed_short_stature;Levy-Hollister_syndrome;Lower_limb_undergrowth;Malignant_tumor_of_testis;Malignant_tumor_of_urinary_bladder;Muenke_syndrome;Multiple_myeloma;Narrow_chest;Neurodevelopmental_delay;Saethre-Chotzen_syndrome;Seborrheic_keratosis;See_cases;Seizure;Severe_achondroplasia-developmental_delay-acanthosis_nigricans_syndrome;Short_ribs;Short_stature;Skeletal_dysplasia;Skeletal_dysplasia_with_acanthosis_nigricans;Small_for_gestational_age;Spermatocytic_seminoma;Squamous_cell_lung_carcinoma;Thanatophoric_dysplasia;Thanatophoric_dysplasia,_type_2;Thanatophoric_dysplasia_type_1;Unilateral_renal_agenesis;Upper_limb_undergrowth;not_specified\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t0\t0\t6.4\t-0.683349552436101\t-0.392116289350703\t-0.538573860699497\t-2.22163439002498\t1.36559781959522\tCrouzon syndrome-acanthosis nigricans syndrome;LADD syndrome;LADD syndrome 1;Muenke syndrome;achondroplasia;camptodactyly-tall stature-scoliosis-hearing loss syndrome;hypochondroplasia;isolated brachycephaly;isolated plagiocephaly;severe achondroplasia-developmental delay-acanthosis nigricans syndrome;thanatophoric dysplasia type 1;thanatophoric dysplasia type 2\tAD;AR;sD\tDefinitive;Limited;Moderate;Strong;Supportive\t10053006;10053006[PMID]_18076102[PMID];10671061;10696568;10914960[PMID];11406607;11467490;15909185;16441300;16501574;16501574[PMID];17033969;17033969[PMID]_24864036[PMID];18076102;18818193;194190;19449430;20301540[PMID];20301588[PMID]_20301628[PMID]_21438135[PMID];20301628[PMID];20301650[PMID]_23149434[PMID];21536014;23149434[PMID];24864036;27139183;28249712;28483234;7493034;7670477;7773297;7847369;7913883;8078586;8630492;8640234;8845844;8880573;8880574;9042914;9279753;9300656;9450868;9580776\t2261\tHGNC:3690\t134934\tAchondroplasia, 100800 (3) AD;Bladder cancer, somatic, 109800 (3);CATSHL syndrome, 610474 (3) AD,AR;Cervical cancer, somatic, 603956 (3);Colorectal cancer, somatic, 114500 (3);Crouzon syndrome with acanthosis nigricans, 612247 (3) AD;Hypochondroplasia, 146000 (3) AD;LADD syndrome 2, 620192 (3) AD;Muenke syndrome, 602849 (3) AD;Nevus, epidermal, somatic, 162900 (3);SADDAN, 616482 (3) AD;Spermatocytic seminoma, somatic, 273300 (3);Thanatophoric dysplasia, type I, 187600 (3) AD;Thanatophoric dysplasia, type II, 187601 (3) AD\tAD;AD,AR\tyes\t\t3\t1.6432e-05\t2.9091e-03\t\t\tfull=5\n4_71553_9371067_DEL_1\t4\t71553\t9371067\t-9299515\tDEL\t4p- syndrom\tPathogenic\tNA\tsplit\tp16.3\tLETM1\t\t\t\tNM_012318\t3\t1813205\t1857883\t44678\t2220\t100\tno\t14\ttxStart-txEnd\t5'UTR-3'UTR\t\t\t1813205\t1857883\t\t\t\t\t\tNeurodegeneration, childhood-onset, with multisystem involvement due to mitochondrial dysfunction, 620089 (3) AR\t\tmorbid:LETM1\t4:1813206-1857883\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t0\t0\t63.78\t0.214548231055587\t-0.175454101774909\t-0.0279109913872425\t-1.46983950545222\t1.90036967420169\tneurodegeneration, childhood-onset, with multisystem involvement due to mitochondrial dysfunction;neurodevelopmental disorder\tAR\tModerate;Strong\t26960370;27287194;30378700;30773800;36055214\t3954\tHGNC:6556\t604407\tNeurodegeneration, childhood-onset, with multisystem involvement due to mitochondrial dysfunction, 620089 (3) AR\tAR\tyes\t\t3\t1.2141e-06\t8.1055e-02\t\t\tfull=5\n4_71553_9371067_DEL_1\t4\t71553\t9371067\t-9299515\tDEL\t4p- syndrom\tPathogenic\tNA\tsplit\tp16.3\tNSD2\t\t\t\tNM_001042424\t3\t1873119\t1983919\t110800\t4098\t100\tno\t22\ttxStart-txEnd\t5'UTR-3'UTR\t\t\t1873119\t1983919\t\t\t\t\t\tRauch-Steindl syndrome, 619695 (3) AD\t\tHI3:NSD2;morbid:NSD2\t4:1873121-1983919;4:1902353-1950545\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t32\t4p_partial_monosomy_syndrome;Global_developmental_delay;Inborn_genetic_diseases;NSD2-related_disorder;Neurodevelopmental_delay;Rauch-Steindl_syndrome;Syndromic_intellectual_disability;Wolf-Hirschhorn_like_syndrome\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t3\t0\t\t\t\t\t\t\tRauch-Steindl syndrome;Wolf-Hirschhorn syndrome;syndromic intellectual disability\tAD\tDefinitive;Strong\t19483677;26633542;28600779;29760529;29892088;30244530;30345613;31171569;9618163\t7468\tHGNC:12766\t602952\tRauch-Steindl syndrome, 619695 (3) AD\tAD\tyes\t\t\t\t\t\t\tfull=5\n4_71553_9371067_DEL_1\t4\t71553\t9371067\t-9299515\tDEL\t4p- syndrom\tPathogenic\tNA\tsplit\tp16.3\tSCARNA22\t\t\t\tNR_003004\t1\t1976362\t1976487\t125\t0\t0\tNA\t1\ttxStart-txEnd\tUTR\t\t\t1976362\t1976487\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t677770\tHGNC:32580\t\t\t\t\t\t\t\t\t\t\tfull=5\n4_71553_9371067_DEL_1\t4\t71553\t9371067\t-9299515\tDEL\t4p- syndrom\tPathogenic\tNA\tsplit\tp16.3\tNELFA\t\t\t\tNM_005663\t5\t1984449\t2010701\t26252\t1587\t100\tno\t11\ttxStart-txEnd\t5'UTR-3'UTR\t\t\t1984449\t2010701\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t0\t0\t62.86\t0.0789021097033232\t0.586448065563417\t0.486612084123194\t-0.704500724266535\t2.35326609523799\t\t\t\t\t7469\tHGNC:12768\t\t\t\t\t\t2\t1.3469e-01\t1.6689e-01\t\t\tfull=5\n4_71553_9371067_DEL_1\t4\t71553\t9371067\t-9299515\tDEL\t4p- syndrom\tPathogenic\tNA\tsplit\tp16.3\tMIR943\t\t\t\tNR_030641\t1\t1988110\t1988204\t94\t0\t0\tNA\t1\ttxStart-txEnd\tUTR\t\t\t1988110\t1988204\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t100126332\tHGNC:33689\t\t\t\t\t\t\t\t\t\t\tfull=5\n4_71553_9371067_DEL_1\t4\t71553\t9371067\t-9299515\tDEL\t4p- syndrom\tPathogenic\tNA\tsplit\tp16.3\tNICOL1\t\t\t\tNM_001141936\t3\t2043721\t2045691\t1970\t288\t100\tno\t4\ttxStart-txEnd\t5'UTR-3'UTR\t\t\t2043721\t2045691\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t401115\tHGNC:34437\t\t\t\t\t\t\t\t\t\t\tfull=5\n4_71553_9371067_DEL_1\t4\t71553\t9371067\t-9299515\tDEL\t4p- syndrom\tPathogenic\tNA\tsplit\tp16.3\tNAT8L\t\t\t\tNM_178557\t4\t2061053\t2070816\t9763\t909\t100\tno\t3\ttxStart-txEnd\t5'UTR-3'UTR\t\t\t2061053\t2070816\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t30\t0\t40.87\t0.098456637925367\t0.547035422647778\t0.555421231184509\t-0.17378562567541\t2.72200675038499\tN-acetylaspartate deficiency\tAR\tLimited\t11310630;15328569;16802720;19807691;26511242\t339983\tHGNC:26742\t610647\t?N-acetylaspartate deficiency, 614063 (3) AR\tAR\t\tyes\t2\t8.6458e-01\t3.2468e-01\t\t\tfull=5\n4_71553_9371067_DEL_1\t4\t71553\t9371067\t-9299515\tDEL\t4p- syndrom\tPathogenic\tNA\tsplit\tp16.3\tPOLN\t\t\t\tNM_181808\t4\t2073644\t2243848\t170204\t2703\t100\tno\t26\ttxStart-txEnd\t5'UTR-3'UTR\t\t\t2073644\t2243848\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t74.11\t1.28008098953073\t-0.213680271829885\t0.298427608261686\t0.0230368692484615\t-1.08931776314455\t\t\t\t\t353497\tHGNC:18870\t\t\t\t\t\t7\t9.4880e-41\t2.9966e-32\t\t\tfull=5\n4_71553_9371067_DEL_1\t4\t71553\t9371067\t-9299515\tDEL\t4p- syndrom\tPathogenic\tNA\tsplit\tp16.3\tHAUS3\t\t\t\tNM_001303143\t2\t2230075\t2243848\t13773\t1812\t100\tno\t6\ttxStart-txEnd\t5'UTR-3'UTR\t\t\t2230075\t2243848\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t46.58\t0.701548607121356\t-0.365908352795815\t0.0332648069020548\t-0.527208917402428\t-2.11601983727089\t\t\t\t\t79441\tHGNC:28719\t\t\t\t\t\t6\t1.2992e-09\t8.8992e-07\t\t\tfull=5\n4_71553_9371067_DEL_1\t4\t71553\t9371067\t-9299515\tDEL\t4p- syndrom\tPathogenic\tNA\tsplit\tp16.3\tMXD4\t\t\t\tNM_006454\t3\t2249158\t2263836\t14678\t630\t100\tno\t6\ttxStart-txEnd\t5'UTR-3'UTR\t\t\t2249158\t2263836\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t51.38\t0.152551047660427\t-0.352633837012323\t-0.186392860565083\t-0.362920265024982\t1.29214097300775\t\t\t\t\t10608\tHGNC:13906\t\t\t\t\t\t2\t7.7635e-01\t8.9694e-01\t\t\tfull=5\n4_71553_9371067_DEL_1\t4\t71553\t9371067\t-9299515\tDEL\t4p- syndrom\tPathogenic\tNA\tsplit\tp16.3\tMIR4800\t\t\t\tNR_039964\t1\t2251803\t2251883\t80\t0\t0\tNA\t1\ttxStart-txEnd\tUTR\t\t\t2251803\t2251883\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t100616358\tHGNC:41877\t\t\t\t\t\t\t\t\t\t\tfull=5\n4_71553_9371067_DEL_1\t4\t71553\t9371067\t-9299515\tDEL\t4p- syndrom\tPathogenic\tNA\tsplit\tp16.3\tZFYVE28\t\t\t\tNM_020972\t3\t2271323\t2420372\t149049\t2664\t100\tno\t13\ttxStart-txEnd\t5'UTR-3'UTR\t\t\t2271323\t2420372\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t65.21\t-0.00272190900027315\t-0.788064481059993\t-0.590406277851698\t-0.457051628812482\t-0.248524904723244\t\t\t\t\t57732\tHGNC:29334\t\t\t\t\t\t2\t7.2340e-02\t8.8846e-01\t\t\tfull=5\n4_71553_9371067_DEL_1\t4\t71553\t9371067\t-9299515\tDEL\t4p- syndrom\tPathogenic\tNA\tsplit\tp16.3\tCFAP99\t\t\t\tNM_001193282\t4\t2420681\t2464729\t44048\t1941\t100\tno\t16\ttxStart-txEnd\t5'UTR-3'UTR\t\t\t2420681\t2464729\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t402160\tHGNC:51180\t\t\t\t\t\t\t\t\t\t\tfull=5\n4_71553_9371067_DEL_1\t4\t71553\t9371067\t-9299515\tDEL\t4p- syndrom\tPathogenic\tNA\tsplit\tp16.3\tRNF4\t\t\t\tNM_002938\t5\t2470832\t2517584\t46752\t573\t100\tno\t8\ttxStart-txEnd\t5'UTR-3'UTR\t\t\t2470832\t2517584\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t46.49\t0.675314441657105\t-0.278968200252929\t0.0738937137831485\t0.142993789011855\t1.01071894719792\t\t\t\t\t6047\tHGNC:10067\t\t\t\t\t\t2\t7.9973e-01\t6.2895e-01\t\t\tfull=5\n4_71553_9371067_DEL_1\t4\t71553\t9371067\t-9299515\tDEL\t4p- syndrom\tPathogenic\tNA\tsplit\tp16.3\tFAM193A\t\t\t\tNM_001366318\t2\t2538373\t2734300\t195927\t4548\t100\tno\t21\ttxStart-txEnd\t5'UTR-3'UTR\t\t\t2538373\t2734300\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t63.75\t0.047435784931723\t0.578303279433319\t0.446297134803958\t-0.738211104213101\t1.24551033534962\t\t\t\t\t8603\tHGNC:16822\t\t\t\t\t\t0\t9.9993e-01\t9.9782e-01\t\t\tfull=5\n4_71553_9371067_DEL_1\t4\t71553\t9371067\t-9299515\tDEL\t4p- syndrom\tPathogenic\tNA\tsplit\tp16.3\tTNIP2\t\t\t\tNM_024309\t4\t2743374\t2758063\t14689\t1290\t100\tno\t6\ttxStart-txEnd\t5'UTR-3'UTR\t\t\t2743374\t2758063\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t81.36\t0.00376891322505335\t0.175301121417126\t0.165045961017247\t0.837642525932054\t1.18082169671465\t\t\t\t\t79155\tHGNC:19118\t\t\t\t\t\t3\t1.5926e-03\t2.9733e-06\t\t\tfull=5\n4_71553_9371067_DEL_1\t4\t71553\t9371067\t-9299515\tDEL\t4p- syndrom\tPathogenic\tNA\tsplit\tp16.3\tSH3BP2\t\t\t\tNM_001145856\t2\t2819896\t2842823\t22927\t1857\t100\tno\t13\ttxStart-txEnd\t5'UTR-3'UTR\t\t\t2819896\t2842823\t\t\t\t\t\tCherubism, 118400 (3) AD\t\tmorbid:SH3BP2\t4:2820541-2842823\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t8\tFibrous_dysplasia_of_jaw;SH3BP2-related_disorder\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t63.94\t0.0147924168443993\t-0.755069155443864\t-0.557230884715189\t-0.774788091773142\t0.0928341710725898\tcherubism\tAD\tStrong;Supportive\t11381256;12900899;17147794;17321449;17368082;19038533;22153076;22153077;22640988;24382142;24916406;26064398;NULL\t6452\tHGNC:10825\t602104\tCherubism, 118400 (3) AD\tAD\tyes\t\t6\t1.1560e-11\t3.1019e-03\t\t\tfull=5\n4_71553_9371067_DEL_1\t4\t71553\t9371067\t-9299515\tDEL\t4p- syndrom\tPathogenic\tNA\tsplit\tp16.3\tADD1\t\t\t\tNM_001354761\t2\t2845570\t2931789\t86219\t2400\t100\tno\t16\ttxStart-txEnd\t5'UTR-3'UTR\t\t\t2845570\t2931789\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tIMH\t4:2823210-17706072\t0.0144\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t46.84\t0.415100440885564\t-0.0353582367682211\t0.160620922610348\t1.55687904782076\t0.599493733703596\t\t\t\t\t118\tHGNC:243\t102680\t(Hypertension, essential, salt-sensitive), 145500 (3) Multifactorial\tMultifactorial\t\tyes\t1\t9.8830e-01\t6.1130e-01\t\t\tfull=5\n4_71553_9371067_DEL_1\t4\t71553\t9371067\t-9299515\tDEL\t4p- syndrom\tPathogenic\tNA\tsplit\tp16.3\tMFSD10\t\t\t\tNM_001410703\t1\t2932293\t2936552\t4259\t1443\t100\tno\t12\ttxStart-txEnd\t5'UTR-3'UTR\t\t\t2932293\t2936552\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tIMH\t4:2823210-17706072\t0.0144\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t74.85\t0.411355639726539\t0.128499204561582\t0.297239579860913\t-3.22135273058939\t-2.0505953640051\t\t\t\t\t10227\tHGNC:16894\t\t\t\t\t\t7\t7.3331e-11\t3.0178e-07\t\t\tfull=5\n4_71553_9371067_DEL_1\t4\t71553\t9371067\t-9299515\tDEL\t4p- syndrom\tPathogenic\tNA\tsplit\tp16.3\tNOP14-AS1\t\t\t\tNR_015453\t2\t2937272\t2952805\t15533\t0\t0\tNA\t4\ttxStart-txEnd\tUTR\t\t\t2937272\t2952805\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tIMH\t4:2823210-17706072\t0.0144\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t317648\tHGNC:20205\t\t\t\t\t\t\t\t\t\t\tfull=5\n4_71553_9371067_DEL_1\t4\t71553\t9371067\t-9299515\tDEL\t4p- syndrom\tPathogenic\tNA\tsplit\tp16.3\tNOP14\t\t\t\tNM_001291978\t2\t2939662\t2965133\t25471\t2574\t100\tno\t18\ttxStart-txEnd\t5'UTR-3'UTR\t\t\t2939662\t2965133\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tIMH\t4:2823210-17706072\t0.0144\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t76.1\t\t\t\t-0.287444310372334\t-1.08649031284551\t\t\t\t\t8602\tHGNC:16821\t\t\t\t\t\t2\t2.1363e-06\t1.7449e-02\t\t\tfull=5\n4_71553_9371067_DEL_1\t4\t71553\t9371067\t-9299515\tDEL\t4p- syndrom\tPathogenic\tNA\tsplit\tp16.3\tGRK4\t\t\t\tNM_182982\t3\t2965297\t3042487\t77190\t1737\t100\tno\t16\ttxStart-txEnd\t5'UTR-3'UTR\t\t\t2965297\t3042487\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tIMH\t4:2823210-17706072\t0.0144\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t77.79\t-1.99297870008351\t-1.29609278714656\t-1.46605851541056\t-0.226834639209249\t-0.865456519909477\t\t\t\t\t2868\tHGNC:4543\t\t\t\t\t\t6\t1.6286e-15\t5.6904e-07\t\t\tfull=5\n4_71553_9371067_DEL_1\t4\t71553\t9371067\t-9299515\tDEL\t4p- syndrom\tPathogenic\tNA\tsplit\tp16.3\tHTT-AS\t\t\t\tNR_045414\t2\t3047865\t3076351\t28486\t0\t0\tNA\t4\ttxStart-txEnd\tUTR\t\t\t3047865\t3076351\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tIMH\t4:2823210-17706072\t0.0144\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t100750326\tHGNC:37118\t\t\t\t\t\t\t\t\t\t\tfull=5\n4_71553_9371067_DEL_1\t4\t71553\t9371067\t-9299515\tDEL\t4p- syndrom\tPathogenic\tNA\tsplit\tp16.3\tHTT\t\t\t\tNM_002111\t8\t3076407\t3245687\t169280\t9429\t100\tno\t67\ttxStart-txEnd\t5'UTR-3'UTR\t\t\t3076407\t3245687\t\t\t\t\t\tHuntington disease, 143100 (3) AD;Lopes-Maciel-Rodan syndrome, 617435 (3) AR\t\tmorbid:HTT\t4:3076408-3245687\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t4\tHuntington_disease\t\t\t\t\t\t\t\t\t\tIMH\t4:2823210-17706072\t0.0144\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t7.59\t-0.672019089975884\t1.20702378077388\t0.455761090475751\t-0.292338464564844\t2.75557960790302\tHuntington disease;Lopes-Maciel-Rodan syndrome;juvenile Huntington disease\tAD;AR\tDefinitive;Limited;Strong;Supportive\t11264541;17181545[PMID];20301482[PMID]_21566141[PMID];248284;26740508;27329733;7550343;7618107;7774020;8401587;8458085\t3064\tHGNC:4851\t613004\tHuntington disease, 143100 (3) AD;Lopes-Maciel-Rodan syndrome, 617435 (3) AR\tAD;AR\tyes\tyes\t0\t1.0000e+00\t1.0000e+00\t\t\tfull=5\n4_71553_9371067_DEL_1\t4\t71553\t9371067\t-9299515\tDEL\t4p- syndrom\tPathogenic\tNA\tsplit\tp16.3\tMSANTD1\t\t\t\tNM_001042690\t2\t3250885\t3258340\t7455\t837\t100\tno\t3\ttxStart-txEnd\t5'UTR-3'UTR\t\t\t3250885\t3258340\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tIMH\t4:2823210-17706072\t0.0144\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t38.82\t\t\t\t0.0606051954062481\t0.881143579184346\t\t\t\t\t345222\tHGNC:33741\t\t\t\t\t\t2\t8.0456e-01\t3.2217e-01\t\t\tfull=5\n4_71553_9371067_DEL_1\t4\t71553\t9371067\t-9299515\tDEL\t4p- syndrom\tPathogenic\tNA\tsplit\tp16.3\tRGS12\t\t\t\tNM_001394155\t1\t3287617\t3441640\t154023\t4344\t100\tno\t18\ttxStart-txEnd\t5'UTR-3'UTR\t\t\t3287617\t3441640\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tIMH\t4:2823210-17706072\t0.0144\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t76.68\t0.764664139864726\t0.714317785060336\t0.923141277111761\t-0.25533666429365\t0.674471945471649\t\t\t\t\t6002\tHGNC:9994\t\t\t\t\t\t3\t4.0922e-09\t5.6037e-04\t\t\tfull=5\n4_71553_9371067_DEL_1\t4\t71553\t9371067\t-9299515\tDEL\t4p- syndrom\tPathogenic\tNA\tsplit\tp16.3\tHGFAC\t\t\t\tNM_001297439\t2\t3443694\t3451213\t7519\t1989\t100\tno\t15\ttxStart-txEnd\t5'UTR-3'UTR\t\t\t3443694\t3451213\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tIMH\t4:2823210-17706072\t0.0144\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t76.94\t-2.62354415217069\t0.291115018050139\t-2.47162789907313\t-2.1421417021426\t-1.44878648893363\t\t\t\t\t3083\tHGNC:4894\t\t\t\t\t\t4\t1.9843e-08\t5.2082e-07\t\t\tfull=5\n4_71553_9371067_DEL_1\t4\t71553\t9371067\t-9299515\tDEL\t4p- syndrom\tPathogenic\tNA\tsplit\tp16.3\tDOK7\t\t\t\tNM_001301071\t2\t3465032\t3503209\t38177\t1827\t100\tno\t10\ttxStart-txEnd\t5'UTR-3'UTR\t\t\t3465032\t3503209\t\t\t\t\t\tFetal akinesia deformation sequence 3, 618389 (3) AR;Myasthenic syndrome, congenital, 10, 254300 (3) AR;Fetal_akinesia_deformation_sequence_1|Congenital_myasthenic_syndrome_10|Fetal_akinesia_deformation_sequence_3\tHP:0001989\tCLN:2834164;CLN:3496433;dbVar:nssv15130945;dbVar:nssv15131476;dbVar:nssv15770186;dbVar:nssv16213451;dbVar:nssv16214333;dbVar:nssv17971686;dbVar:nssv17972166;dbVar:nssv17976550;dbVar:nssv18786333;dbVar:nssv18790180;morbid:DOK7\t4:3465094-3495238;4:3465104-3465298;4:3475114-3491543;4:3478201-3482971;4:3478271-3491403;4:3486271-3496209;4:3487104-3487370;4:3487247-3495248;4:3487257-3487395;4:3487257-3495238;4:3494467-3495228;4:3494950-3495048;4:3495083-3495158\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t76\tCongenital_myasthenic_syndrome;Congenital_myasthenic_syndrome_10;DOK7-related_disorder;Fetal_akinesia_deformation_sequence_1;Fetal_akinesia_deformation_sequence_3;Inborn_genetic_diseases;Rett_syndrome;See_cases\t\t\t\t\t\t\t\t\t\tIMH\t4:2823210-17706072\t0.0144\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t30\t\t75.35\t\t\t\t-2.68253992069213\t-3.72411383897722\tcongenital myasthenic syndrome 10;fetal akinesia deformation sequence 1;fetal akinesia deformation sequence 3;postsynaptic congenital myasthenic syndrome\tAR\tDefinitive;Limited;Strong;Supportive\t16794080;16917026;17439981;18626973;19261599;19261599[PMID];20147321;20301347[PMID];29395672;31453852;32360404\t285489\tHGNC:26594\t610285\tFetal akinesia deformation sequence 3, 618389 (3) AR;Myasthenic syndrome, congenital, 10, 254300 (3) AR\tAR\tyes\t\t5\t1.0263e-04\t4.8084e-03\t\t\tfull=5\n4_71553_9371067_DEL_1\t4\t71553\t9371067\t-9299515\tDEL\t4p- syndrom\tPathogenic\tNA\tsplit\tp16.3\tLRPAP1\t\t\t\tNM_002337\t4\t3505338\t3534149\t28811\t1074\t100\tno\t8\ttxStart-txEnd\t5'UTR-3'UTR\t\t\t3505338\t3534149\t\t\t\t\t\tMyopia 23, AR, 615431 (3) AR\t\tmorbid:LRPAP1\t4:3505339-3534149\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t2\tMyopia_23,_autosomal_recessive\t\t\t\t\t\t\t\t\t\tIMH\t4:2823210-17706072\t0.0144\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t30\t\t81.97\t-0.901439467568047\t-1.0008332959639\t-1.03424805406881\t-0.233147203181143\t-1.38131789177637\tmyopia 23, autosomal recessive\tAR\tLimited;Strong\t23830514;25525168\t4043\tHGNC:6701\t104225\tMyopia 23, AR, 615431 (3) AR\tAR\tyes\t\t6\t4.4951e-07\t6.0843e-03\t\t\tfull=5\n4_71553_9371067_DEL_1\t4\t71553\t9371067\t-9299515\tDEL\t4p- syndrom\tPathogenic\tNA\tsplit\tp16.3\tLINC00955\t\t\t\tNR_040045\t1\t3578595\t3592712\t14117\t0\t0\tNA\t3\ttxStart-txEnd\tUTR\t\t\t3578595\t3592712\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tIMH\t4:2823210-17706072\t0.0144\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t93.6\t\t\t\t\t\t\t\t\t\t285492\tHGNC:26644\t\t\t\t\t\t8\t4.5772e-01\t\t\t\tfull=5\n4_71553_9371067_DEL_1\t4\t71553\t9371067\t-9299515\tDEL\t4p- syndrom\tPathogenic\tNA\tsplit\tp16.3\tLINC02171\t\t\t\tNR_034136\t1\t3675319\t3679582\t4263\t0\t0\tNA\t3\ttxStart-txEnd\tUTR\t\t\t3675319\t3679582\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tIMH\t4:2823210-17706072\t0.0144\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t100133461\tHGNC:53033\t\t\t\t\t\t\t\t\t\t\tfull=5\n4_71553_9371067_DEL_1\t4\t71553\t9371067\t-9299515\tDEL\t4p- syndrom\tPathogenic\tNA\tsplit\tp16.3\tADRA2C\t\t\t\tNM_000683\t4\t3768111\t3770253\t2142\t1389\t72\tno\t1\ttxStart-txEnd\t5'UTR-3'UTR\t\t\t3768111\t3770253\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tIMH\t4:2823210-17706072\t0.0144\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t68.35\t\t\t\t3.21047317301589\t5.41905620095129\t\t\t\t\t152\tHGNC:283\t\t\t\t\t\t3\t5.0159e-01\t6.4595e-01\t\t\tfull=5\n4_71553_9371067_DEL_1\t4\t71553\t9371067\t-9299515\tDEL\t4p- syndrom\tPathogenic\tNA\tsplit\tp16.3\tFAM86EP\t\t\t\tNR_130740\t1\t3943486\t3957155\t13669\t0\t0\tNA\t4\ttxStart-txEnd\tUTR\t\t\t3943486\t3957155\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tdbVar\tchr4:3894913-4168551;chr4:3897463-4171386;chr4:3906095-3993252;chr4:3923039-4103069\t0.01\t\t\t\tIMH\t4:2823210-17706072\t0.0144\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t348926\tHGNC:28017\t\t\t\t\t\t\t\t\t\t\tfull=5\n4_71553_9371067_DEL_1\t4\t71553\t9371067\t-9299515\tDEL\t4p- syndrom\tPathogenic\tNA\tsplit\tp16.3\tOTOP1\t\t\t\tNM_177998\t3\t4190452\t4228656\t38204\t1839\t100\tno\t6\ttxStart-txEnd\t5'UTR-3'UTR\t\t\t4190452\t4228656\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tIMH\t4:2823210-17706072;4:4005753-9642302;4:4006353-9641444;4:4041723-9068132;4:4151586-8958950\t0.1474\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t80.7\t0.337011959699387\t0.333342940376347\t0.48201697995522\t0.532976598896309\t-0.342636515952079\t\t\t\t\t133060\tHGNC:19656\t\t\t\t\t\t9\t4.8437e-24\t7.3147e-16\t\t\tfull=5\n4_71553_9371067_DEL_1\t4\t71553\t9371067\t-9299515\tDEL\t4p- syndrom\tPathogenic\tNA\tsplit\tp16.3\tTMEM128\t\t\t\tNM_001297551\t2\t4237268\t4249950\t12682\t498\t100\tno\t5\ttxStart-txEnd\t5'UTR-3'UTR\t\t\t4237268\t4249950\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tIMH\t4:2823210-17706072;4:4005753-9642302;4:4006353-9641444;4:4041723-9068132;4:4151586-8958950\t0.1474\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t73.9\t\t\t\t0.701580942281967\t-0.111669494459405\t\t\t\t\t85013\tHGNC:28201\t\t\t\t\t\t8\t1.9994e-04\t1.1006e-01\t\t\tfull=5\n4_71553_9371067_DEL_1\t4\t71553\t9371067\t-9299515\tDEL\t4p- syndrom\tPathogenic\tNA\tsplit\tp16.3\tLYAR\t\t\t\tNM_017816\t3\t4269427\t4291881\t22454\t1140\t100\tno\t10\ttxStart-txEnd\t5'UTR-3'UTR\t\t\t4269427\t4291881\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tIMH\t4:2823210-17706072;4:4005753-9642302;4:4006353-9641444;4:4041723-9068132;4:4151586-8958950\t0.1474\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t65.63\t-1.04982790537607\t0.837810587333259\t0.0401032398207032\t0.075048187998812\t-0.816993645198656\t\t\t\t\t55646\tHGNC:26021\t\t\t\t\t\t5\t3.7580e-07\t1.3245e-04\t\t\tfull=5\n4_71553_9371067_DEL_1\t4\t71553\t9371067\t-9299515\tDEL\t4p- syndrom\tPathogenic\tNA\tsplit\tp16.3\tZBTB49\t\t\t\tNM_001330625\t2\t4291977\t4323510\t31533\t2298\t100\tno\t8\ttxStart-txEnd\t5'UTR-3'UTR\t\t\t4291977\t4323510\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tIMH\t4:2823210-17706072;4:4005753-9642302;4:4006353-9641444;4:4041723-9068132;4:4151586-8958950\t0.1474\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t89.21\t-0.48130989574319\t0.452744382601107\t0.130333981724112\t-0.597063638061633\t0.18239534186363\t\t\t\t\t166793\tHGNC:19883\t\t\t\t\t\t4\t1.3752e-08\t9.1642e-03\t\t\tfull=5\n4_71553_9371067_DEL_1\t4\t71553\t9371067\t-9299515\tDEL\t4p- syndrom\tPathogenic\tNA\tsplit\tp16.3\tNSG1\t\t\t\tNM_001382227\t1\t4388828\t4420785\t31957\t585\t100\tno\t6\ttxStart-txEnd\t5'UTR-3'UTR\t\t\t4388828\t4420785\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tIMH\t4:2823210-17706072;4:4005753-9642302;4:4006353-9641444;4:4041723-9068132;4:4151586-8958950\t0.1474\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t-0.025549754331335\t0.153242929586267\t0.138678963648336\t0.898629456776545\t-0.214997258794035\t\t\t\t\t27065\tHGNC:18790\t\t\t\t\t\t7\t8.8286e-03\t4.5383e-03\t\t\tfull=5\n4_71553_9371067_DEL_1\t4\t71553\t9371067\t-9299515\tDEL\t4p- syndrom\tPathogenic\tNA\tsplit\tp16.3-p16.2\tSTX18\t\t\t\tNM_016930\t4\t4420694\t4543775\t123081\t1008\t100\tno\t11\ttxStart-txEnd\t5'UTR-3'UTR\t\t\t4420694\t4543775\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tIMH\t4:2823210-17706072;4:4005753-9642302;4:4006353-9641444;4:4041723-9068132;4:4151586-8958950\t0.1474\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t39.55\t0.843231894587517\t0.108678775214296\t0.455109011286475\t-0.165997903989801\t0.517811238015827\t\t\t\t\t53407\tHGNC:15942\t\t\t\t\t\t5\t2.4881e-07\t1.1678e-06\t\t\tfull=5\n4_71553_9371067_DEL_1\t4\t71553\t9371067\t-9299515\tDEL\t4p- syndrom\tPathogenic\tNA\tsplit\tp16.3\tSTX18-IT1\t\t\t\tNR_126434\t1\t4477847\t4483427\t5580\t0\t0\tNA\t4\ttxStart-txEnd\tUTR\t\t\t4477847\t4483427\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tIMH\t4:2823210-17706072;4:4005753-9642302;4:4006353-9641444;4:4041723-9068132;4:4151586-8958950\t0.1474\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tfull=5\n4_71553_9371067_DEL_1\t4\t71553\t9371067\t-9299515\tDEL\t4p- syndrom\tPathogenic\tNA\tsplit\tp16.2\tSTX18-AS1\t\t\t\tNR_037888\t1\t4543857\t4712665\t168808\t0\t0\tNA\t6\ttxStart-txEnd\tUTR\t\t\t4543857\t4712665\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tIMH\t4:2823210-17706072;4:4005753-9642302;4:4006353-9641444;4:4041723-9068132;4:4151586-8958950\t0.1474\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t100507266\tHGNC:48877\t\t\t\t\t\t\t\t\t\t\tfull=5\n4_71553_9371067_DEL_1\t4\t71553\t9371067\t-9299515\tDEL\t4p- syndrom\tPathogenic\tNA\tsplit\tp16.2\tSNORD162\t\t\t\tNR_145783\t1\t4666052\t4666150\t98\t0\t0\tNA\t1\ttxStart-txEnd\tUTR\t\t\t4666052\t4666150\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tIMH\t4:2823210-17706072;4:4005753-9642302;4:4006353-9641444;4:4041723-9068132;4:4151586-8958950\t0.1474\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t109623454\tHGNC:51876\t\t\t\t\t\t\t\t\t\t\tfull=5\n4_71553_9371067_DEL_1\t4\t71553\t9371067\t-9299515\tDEL\t4p- syndrom\tPathogenic\tNA\tsplit\tp16.2\tLOC101928279\t\t\t\tNR_125892\t1\t4763486\t4789101\t25615\t0\t0\tNA\t3\ttxStart-txEnd\tUTR\t\t\t4763486\t4789101\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tIMH\t4:2823210-17706072;4:4005753-9642302;4:4006353-9641444;4:4041723-9068132;4:4151586-8958950\t0.1474\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tfull=5\n4_71553_9371067_DEL_1\t4\t71553\t9371067\t-9299515\tDEL\t4p- syndrom\tPathogenic\tNA\tsplit\tp16.2\tLINC01396\t\t\t\tNR_125765\t1\t4846163\t4852554\t6391\t0\t0\tNA\t4\ttxStart-txEnd\tUTR\t\t\t4846163\t4852554\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tIMH\t4:2823210-17706072;4:4005753-9642302;4:4006353-9641444;4:4041723-9068132;4:4151586-8958950\t0.1474\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tfull=5\n4_71553_9371067_DEL_1\t4\t71553\t9371067\t-9299515\tDEL\t4p- syndrom\tPathogenic\tNA\tsplit\tp16.2\tMSX1\t\t\t\tNM_002448\t3\t4861391\t4865663\t4272\t912\t100\tno\t2\ttxStart-txEnd\t5'UTR-3'UTR\t\t\t4861391\t4865663\t\t\t\t\t\tEctodermal dysplasia 3, Witkop type, 189500 (3) AD;Orofacial cleft 5, 608874 (3) AD;Tooth agenesis, selective, 1, with or without orofacial cleft, 106600 (3) AD\t\tHI3:MSX1;morbid:MSX1\t4:4861392-4865663;4:4861393-4865663\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t12\tHypoplastic_enamel-onycholysis-hypohidrosis_syndrome;MSX1-related_disorder;Tooth_agenesis,_selective,_1\t\t\t\t\t\t\t\t\t\tIMH\t4:2823210-17706072;4:4005753-9642302;4:4006353-9641444;4:4041723-9068132;4:4151586-8958950\t0.1474\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t3\t0\t1.21\t0.15460042661567\t0.172845644735031\t0.256065903692486\t1.56448356794936\t2.50372489686823\ttooth agenesis;tooth agenesis, selective, 1;tooth and nail syndrome\tAD\tDefinitive;Limited;Strong;Supportive\t1054139;10742093;10815578;11369996;11369996[PMID];12097313;15264286;16498076;26502894;4521949;8466837;8469557;8696335;9742121;NULL\t4487\tHGNC:7391\t142983\tEctodermal dysplasia 3, Witkop type, 189500 (3) AD;Orofacial cleft 5, 608874 (3) AD;Tooth agenesis, selective, 1, with or without orofacial cleft, 106600 (3) AD\tAD\tyes\t\t5\t1.6517e-01\t2.7536e-01\t\t\tfull=5\n4_71553_9371067_DEL_1\t4\t71553\t9371067\t-9299515\tDEL\t4p- syndrom\tPathogenic\tNA\tsplit\tp16.2\tLOC101928306\t\t\t\tNR_125893\t1\t4922534\t4990398\t67864\t0\t0\tNA\t3\ttxStart-txEnd\tUTR\t\t\t4922534\t4990398\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tIMH\t4:2823210-17706072;4:4005753-9642302;4:4006353-9641444;4:4041723-9068132;4:4151586-8958950\t0.1474\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tfull=5\n4_71553_9371067_DEL_1\t4\t71553\t9371067\t-9299515\tDEL\t4p- syndrom\tPathogenic\tNA\tsplit\tp16.2\tCYTL1\t\t\t\tNM_018659\t3\t5016312\t5021185\t4873\t411\t100\tno\t4\ttxStart-txEnd\t5'UTR-3'UTR\t\t\t5016312\t5021185\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tIMH\t4:2823210-17706072;4:4005753-9642302;4:4006353-9641444;4:4041723-9068132;4:4151586-8958950\t0.1474\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t76.44\t-0.6295570831736\t0.0670299843738293\t-0.200045256499347\t0.45277691276168\t0.0974901129923348\t\t\t\t\t54360\tHGNC:24435\t\t\t\t\t\t9\t1.0733e-05\t6.5277e-04\t\t\tfull=5\n4_71553_9371067_DEL_1\t4\t71553\t9371067\t-9299515\tDEL\t4p- syndrom\tPathogenic\tNA\tsplit\tp16.2\tSTK32B\t\t\t\tNM_018401\t3\t5053206\t5502716\t449510\t1245\t100\tno\t12\ttxStart-txEnd\t5'UTR-3'UTR\t\t\t5053206\t5502716\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tIMH\t4:2823210-17706072;4:4005753-9642302;4:4006353-9641444;4:4041723-9068132;4:4151586-8958950\t0.1474\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t39.31\t-0.246593908057665\t0.0285262483698947\t-0.063872653370671\t-2.65953872619111\t-2.04902349969142\t\t\t\t\t55351\tHGNC:14217\t\t\t\t\t\t5\t4.9116e-08\t4.3235e-03\t\t\tfull=5\n4_71553_9371067_DEL_1\t4\t71553\t9371067\t-9299515\tDEL\t4p- syndrom\tPathogenic\tNA\tsplit\tp16.2\tLINC01587\t\t\t\tNR_126519\t1\t5526295\t5529528\t3233\t0\t0\tNA\t4\ttxStart-txEnd\tUTR\t\t\t5526295\t5529528\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tdbVar\tchr4:5334999-5780000\t0.01\t\t\t\tIMH\t4:2823210-17706072;4:4005753-9642302;4:4006353-9641444;4:4041723-9068132;4:4151586-8958950\t0.1474\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t96.4\t\t\t\t\t\t\t\t\t\t10141\tHGNC:13716\t\t\t\t\t\t\t\t\t\t\tfull=5\n4_71553_9371067_DEL_1\t4\t71553\t9371067\t-9299515\tDEL\t4p- syndrom\tPathogenic\tNA\tsplit\tp16.2\tEVC2\t\t\t\tNM_147127\t5\t5564165\t5710286\t146121\t3927\t100\tno\t22\ttxStart-txEnd\t5'UTR-3'UTR\t\t\t5564165\t5710286\t\t\t\tdbVar:nssv17973849\t4:5567009-5587839\t\t\tdbVar:nssv15770321;dbVar:nssv16213046;dbVar:nssv16213271;dbVar:nssv16297119;dbVar:nssv17172955;dbVar:nssv17971266;dbVar:nssv17971361;dbVar:nssv17972056;dbVar:nssv18790018;dbVar:nssv18790020;dbVar:nssv18790021;dbVar:nssv18790022\t4:5564566-5578191;4:5564566-5586587;4:5564576-5567096;4:5570162-5570377;4:5576403-5576509;4:5630277-5633769;4:5630336-5635926;4:5630338-5635927;4:5642222-5642585;4:5690875-5691080;4:5690875-5696238;4:5696053-5696238\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t199\tCurry-Hall_syndrome;EVC2-related_disorder;Ellis-van_Creveld_syndrome;Inborn_genetic_diseases;Jeune_thoracic_dystrophy;Short-rib_thoracic_dysplasia_6_with_or_without_polydactyly;Type_IV_short_rib_polydactyly_syndrome;not_specified\t\t\t\tdbVar\tchr4:5334999-5780000\t0.01\t\t\t\tIMH\t4:2823210-17706072;4:4005753-9642302;4:4006353-9641444;4:4041723-9068132;4:4151586-8958950\t0.1474\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t30\t0\t74.81\t-0.675336787286134\t-0.144705826949755\t-0.333473000003108\t-1.44193705805358\t-2.99791740003004\tEllis-van Creveld syndrome;acrofacial dysostosis, Weyers type\tAD;AR\tDefinitive;Strong;Supportive\t16404586;17024374;17547743;19810119;19876929;225500;22616035;23220543;23220543[PMID]_22791528[PMID]_12571802[PMID]_12468274[PMID];23220543[PMID]_22791528[PMID]_16404586[PMID]\t132884\tHGNC:19747\t607261\tEllis-van Creveld syndrome, 225500 (3) AR;Weyers acrofacial dysostosis, 193530 (3) AD\tAD;AR\tyes\t\t5\t1.0207e-34\t1.0533e-21\t\t\tfull=5\n4_71553_9371067_DEL_1\t4\t71553\t9371067\t-9299515\tDEL\t4p- syndrom\tPathogenic\tNA\tsplit\tp16.2\tEVC\t\t\t\tNM_153717\t3\t5712927\t5816032\t103105\t2979\t100\tno\t21\ttxStart-txEnd\t5'UTR-3'UTR\t\t\t5712927\t5816032\t\t\t\tdbVar:nssv17172169\t4:5785270-5803831\t?Weyers acrofacial dysostosis, 193530 (3) AD;Ellis-van Creveld syndrome, 225500 (3) AR;Ellis-van_Creveld_syndrome|Curry-Hall_syndrome\t\tCLN:1313135;dbVar:nssv15144315;dbVar:nssv16211870;dbVar:nssv16297131;dbVar:nssv17172168;dbVar:nssv17172572;dbVar:nssv17172573;dbVar:nssv17172574;dbVar:nssv17971734;dbVar:nssv17973718;nssv17974037;dbVar:nssv17975024;dbVar:nssv18786244;dbVar:nssv18790117;dbVar:nssv18790118;dbVar:nssv18790119;dbVar:nssv18790120;morbid:EVC\t4:5712928-5816032;4:5713109-5714221;4:5713159-5713318;4:5731025-5759862;4:5733143-5735172;4:5749726-5755670;4:5754554-5755670;4:5754554-5758099;4:5754554-5785501;4:5754599-5758602;4:5785270-5812774;4:5795340-5795484;4:5795341-5795483;4:5798730-5798979;4:5798740-5798969;4:5803668-5806578;4:5809919-5811348\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t161\tCurry-Hall_syndrome;EVC-related_disorder;Ellis-van_Creveld_syndrome;Short-rib_thoracic_dysplasia_6_with_or_without_polydactyly\t\t\t\t\t\t\t\t\t\tIMH\t4:2823210-17706072;4:4005753-9642302;4:4006353-9641444;4:4041723-9068132;4:4151586-8958950\t0.1474\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t72.76\t-2.57221447207538\t-0.38737545040403\t-1.26125942639438\t-0.471176482163648\t-1.41925515956187\tEllis-van Creveld syndrome;acrofacial dysostosis, Weyers type\tAD;AR\tDefinitive;Limited;Strong;Supportive\t10700184;10700184[PMID];17024374;23220543;23220543[PMID]_22791528[PMID]_19744229[PMID]_18947413[PMID];26748586;29321360;30076350;7628126\t2121\tHGNC:3497\t604831\t?Weyers acrofacial dysostosis, 193530 (3) AD;Ellis-van Creveld syndrome, 225500 (3) AR\tAD;AR\tyes\tyes\t5\t3.4620e-25\t8.0150e-08\t\t\tfull=5\n4_71553_9371067_DEL_1\t4\t71553\t9371067\t-9299515\tDEL\t4p- syndrom\tPathogenic\tNA\tsplit\tp16.2\tCRMP1\t\t\t\tNM_001014809\t3\t5822490\t5894813\t72323\t2061\t100\tno\t14\ttxStart-txEnd\t5'UTR-3'UTR\t\t\t5822490\t5894813\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tIMH\t4:2823210-17706072;4:4005753-9642302;4:4006353-9641444;4:4041723-9068132;4:4151586-8958950\t0.1474\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t43.19\t-2.45831687825306\t-0.486186941840208\t-1.27538361497834\t0.0326224850029478\t2.34696639804313\t\t\t\t\t1400\tHGNC:2365\t\t\t\t\t\t1\t9.9173e-01\t9.5327e-01\t\t\tfull=5\n4_71553_9371067_DEL_1\t4\t71553\t9371067\t-9299515\tDEL\t4p- syndrom\tPathogenic\tNA\tsplit\tp16.2\tMIR378D1\t\t\t\tNR_039608\t1\t5925001\t5925055\t54\t0\t0\tNA\t1\ttxStart-txEnd\tUTR\t\t\t5925001\t5925055\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tdbVar\tchr4:5918046-5928942\t0.01\t\t\t\tIMH\t4:2823210-17706072;4:4005753-9642302;4:4006353-9641444;4:4041723-9068132;4:4151586-8958950\t0.1474\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t100616201\tHGNC:41550\t\t\t\t\t\t\t\t\t\t\tfull=5\n4_71553_9371067_DEL_1\t4\t71553\t9371067\t-9299515\tDEL\t4p- syndrom\tPathogenic\tNA\tsplit\tp16.2-p16.1\tC4orf50\t\t\t\tNM_001364689\t3\t5961101\t6020158\t59057\t4527\t100\tno\t12\ttxStart-txEnd\t5'UTR-3'UTR\t\t\t5961101\t6020158\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tIMH\t4:2823210-17706072;4:4005753-9642302;4:4006353-9641444;4:4041723-9068132;4:4151586-8958950\t0.1474\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t98.01\t0.369490376960693\t0.371330581311454\t0.517389412359409\t-2.62911053265251\t-1.8079483903393\t\t\t\t\t389197\tHGNC:33766\t\t\t\t\t\t7\t7.7361e-19\t6.3423e-10\t\t\tfull=5\n4_71553_9371067_DEL_1\t4\t71553\t9371067\t-9299515\tDEL\t4p- syndrom\tPathogenic\tNA\tsplit\tp16.1\tJAKMIP1\t\t\t\tNM_001099433\t2\t6027925\t6202276\t174351\t2496\t100\tno\t21\ttxStart-txEnd\t5'UTR-3'UTR\t\t\t6027925\t6202276\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t1\tSmith-Magenis_Syndrome-like\t\t\t\t\t\t\t\t\t\tIMH\t4:2823210-17706072;4:4005753-9642302;4:4006353-9641444;4:4041723-9068132;4:4151586-8958950\t0.1474\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t52.99\t0.975078008148592\t0.865866943304307\t1.11611247300207\t0.172471674763915\t3.32151835531883\t\t\t\t\t152789\tHGNC:26460\t\t\t\t\t\t0\t9.9986e-01\t9.9317e-01\t\t\tfull=5\n4_71553_9371067_DEL_1\t4\t71553\t9371067\t-9299515\tDEL\t4p- syndrom\tPathogenic\tNA\tsplit\tp16.1\tLOC128125818\t\t\t\tNM_001415001\t1\t6066703\t6071889\t5186\t138\t100\tno\t2\ttxStart-txEnd\t5'UTR-3'UTR\t\t\t6066703\t6071889\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tIMH\t4:2823210-17706072;4:4005753-9642302;4:4006353-9641444;4:4041723-9068132;4:4151586-8958950\t0.1474\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tfull=5\n4_71553_9371067_DEL_1\t4\t71553\t9371067\t-9299515\tDEL\t4p- syndrom\tPathogenic\tNA\tsplit\tp16.1\tJAKMIP1-DT\t\t\t\tNR_037863\t1\t6202459\t6235663\t33204\t0\t0\tNA\t4\ttxStart-txEnd\tUTR\t\t\t6202459\t6235663\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tIMH\t4:2823210-17706072;4:4005753-9642302;4:4006353-9641444;4:4041723-9068132;4:4151586-8958950\t0.1474\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t285484\tHGNC:27728\t\t\t\t\t\t\t\t\t\t\tfull=5\n4_71553_9371067_DEL_1\t4\t71553\t9371067\t-9299515\tDEL\t4p- syndrom\tPathogenic\tNA\tsplit\tp16.1\tWFS1\t\t\t\tNM_001145853\t1\t6271576\t6304992\t33416\t2673\t100\tno\t8\ttxStart-txEnd\t5'UTR-3'UTR\t\t\t6271576\t6304992\t\t\t\t\t\t?Cataract 41, 116400 (3) AD;Deafness, AD 6;14;38, 600965 (3) AD;Wolfram syndrome 1, 222300 (3) AR;Wolfram-like syndrome, AD, 614296 (3) AD;Diabetes mellitus, noninsulin-dependent, association with, 125853 (3) AD\t\tdbVar:nssv18790633;morbid:WFS1\t4:6271577-6304992;4:6279184-6279434\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t142\tAutosomal_dominant_nonsyndromic_hearing_loss;Autosomal_dominant_nonsyndromic_hearing_loss_6;Cataract_41;Diabetes_mellitus;Inborn_genetic_diseases;Meniere_disease;Nonsyndromic_genetic_hearing_loss;Optic_atrophy;Rare_genetic_deafness;Retinal_dystrophy;See_cases;Type_2_diabetes_mellitus;WFS1-Related_Spectrum_Disorders;WFS1-related_disorder;WFS1-spectrum_disorder;Wolfram-like_syndrome;Wolfram_syndrome;Wolfram_syndrome_1;not_specified\t\t\t\t\t\t\t\t\t\tIMH\t4:2823210-17706072;4:4005753-9642302;4:4006353-9641444;4:4041723-9068132;4:4151586-8958950\t0.1474\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t0\t0\t33.79\t0.279433736423428\t0.30418592454869\t0.420298457025828\t\t\tWolfram syndrome;Wolfram syndrome 1;Wolfram-like syndrome;autosomal dominant nonsyndromic hearing loss;autosomal dominant nonsyndromic hearing loss 6;cataract 41;early-onset nuclear cataract;type 2 diabetes mellitus\tAD;AR\tDefinitive;Limited;Strong;Supportive\t11709537;11709538;12073007;12754709;12955714;16151413;16648378;16806192;16806192[PMID]_12913071[PMID];17492394;18544103;20069065;20069065[PMID]_20301750[PMID];20301607[PMID]_24148127[PMID];21446023;21538838;21602428;222300;23531866;23531866[PMID];243330;248846;251462;25250959;27395765;28802351;29529044;31313226;31555371;34014271;35018440;606201\t7466\tHGNC:12762\t606201\t?Cataract 41, 116400 (3) AD;Deafness, AD 6/14/38, 600965 (3) AD;Wolfram syndrome 1, 222300 (3) AR;Wolfram-like syndrome, AD, 614296 (3) AD;(Diabetes mellitus, noninsulin-dependent, association with), 125853 (3) AD\tAD;AR\tyes\tyes\t9\t1.6231e-38\t\t\t\tfull=5\n4_71553_9371067_DEL_1\t4\t71553\t9371067\t-9299515\tDEL\t4p- syndrom\tPathogenic\tNA\tsplit\tp16.1\tPPP2R2C\t\t\t\tNM_020416\t4\t6322307\t6474341\t152034\t1344\t100\tno\t9\ttxStart-txEnd\t5'UTR-3'UTR\t\t\t6322307\t6474341\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tIMH\t4:2823210-17706072;4:4005753-9642302;4:4006353-9641444;4:4041723-9068132;4:4151586-8958950\t0.1474\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t50.29\t0.338434929038259\t0.422718688109719\t0.476236130280707\t-0.54023780146542\t4.10111380803453\t\t\t\t\t5522\tHGNC:9306\t\t\t\t\t\t1\t8.9954e-01\t5.6445e-01\t\t\tfull=5\n4_71553_9371067_DEL_1\t4\t71553\t9371067\t-9299515\tDEL\t4p- syndrom\tPathogenic\tNA\tsplit\tp16.1\tMAN2B2\t\t\t\tNM_015274\t3\t6576915\t6625089\t48174\t3030\t100\tno\t19\ttxStart-txEnd\t5'UTR-3'UTR\t\t\t6576915\t6625089\t\t\t\t\t\tCongenital disorder of glycosylation type 1EE with or without immunodeficiency, 621140 (3) AR\t\tmorbid:MAN2B2\t4:6576916-6625089\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tIMH\t4:2823210-17706072;4:4005753-9642302;4:4006353-9641444;4:4041723-9068132;4:4151586-8958950\t0.1474\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t83.66\t-1.20308868163847\t-0.039423685654856\t-0.514512683951566\t0.311204487601666\t-0.733522379663636\tMAN2B2 deficiency\tAR\tLimited\t\t23324\tHGNC:29623\t618899\tCongenital disorder of glycosylation type 1EE with or without immunodeficiency, 621140 (3) AR\tAR\tyes\t\t5\t6.5570e-23\t4.3573e-18\t\t\tfull=5\n4_71553_9371067_DEL_1\t4\t71553\t9371067\t-9299515\tDEL\t4p- syndrom\tPathogenic\tNA\tsplit\tp16.1\tMRFAP1\t\t\t\tNM_001272053\t2\t6642411\t6644456\t2045\t384\t96\tno\t3\ttxStart-txEnd\t5'UTR-3'UTR\t\t\t6642411\t6644456\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tIMH\t4:2823210-17706072;4:4005753-9642302;4:4006353-9641444;4:4041723-9068132;4:4151586-8958950\t0.1474\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t78.84\t0.686792213866423\t0.236901723651345\t0.49521306481059\t0.837271434822507\t2.12628699887071\t\t\t\t\t93621\tHGNC:24549\t\t\t\t\t\t6\t3.1404e-01\t1.7706e-01\t\t\tfull=5\n4_71553_9371067_DEL_1\t4\t71553\t9371067\t-9299515\tDEL\t4p- syndrom\tPathogenic\tNA\tsplit\tp16.1\tLINC02482\t\t\t\tNR_134664\t1\t6672454\t6675608\t3154\t0\t0\tNA\t2\ttxStart-txEnd\tUTR\t\t\t6672454\t6675608\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tdbVar\tchr4:6666000-6686000\t0.01\t\t\t\tIMH\t4:2823210-17706072;4:4005753-9642302;4:4006353-9641444;4:4041723-9068132;4:4151586-8958950\t0.1474\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t105374366\tHGNC:53458\t\t\t\t\t\t\t\t\t\t\tfull=5\n4_71553_9371067_DEL_1\t4\t71553\t9371067\t-9299515\tDEL\t4p- syndrom\tPathogenic\tNA\tsplit\tp16.1\tMRFAP1L2\t\t\t\tNM_138699\t3\t6675801\t6677774\t1973\t360\t19\tno\t1\ttxStart-txEnd\t5'UTR-3'UTR\t\t\t6675801\t6677774\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tdbVar\tchr4:6666000-6686000\t0.01\t\t\t\tIMH\t4:2823210-17706072;4:4005753-9642302;4:4006353-9641444;4:4041723-9068132;4:4151586-8958950\t0.1474\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t93622\tHGNC:25109\t\t\t\t\t\t\t\t\t\t\tfull=5\n4_71553_9371067_DEL_1\t4\t71553\t9371067\t-9299515\tDEL\t4p- syndrom\tPathogenic\tNA\tsplit\tp16.1\tLINC02481\t\t\t\tNR_147207\t1\t6689174\t6692246\t3072\t0\t0\tNA\t3\ttxStart-txEnd\tUTR\t\t\t6689174\t6692246\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tIMH\t4:2823210-17706072;4:4005753-9642302;4:4006353-9641444;4:4041723-9068132;4:4151586-8958950\t0.1474\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t339988\tHGNC:27958\t\t\t\t\t\t\t\t\t\t\tfull=5\n4_71553_9371067_DEL_1\t4\t71553\t9371067\t-9299515\tDEL\t4p- syndrom\tPathogenic\tNA\tsplit\tp16.1\tS100P\t\t\t\tNM_005980\t3\t6695604\t6698897\t3293\t288\t100\tno\t2\ttxStart-txEnd\t5'UTR-3'UTR\t\t\t6695604\t6698897\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tIMH\t4:2823210-17706072;4:4005753-9642302;4:4006353-9641444;4:4041723-9068132;4:4151586-8958950\t0.1474\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t89.8\t-0.0213485169134644\t-0.684657921159283\t-0.478383965590741\t0.251281715605183\t-0.615839346409602\t\t\t\t\t6286\tHGNC:10504\t\t\t\t\t\t9\t3.3257e-02\t4.8649e-02\t\t\tfull=5\n4_71553_9371067_DEL_1\t4\t71553\t9371067\t-9299515\tDEL\t4p- syndrom\tPathogenic\tNA\tsplit\tp16.1\tMRFAP1L1\t\t\t\tNM_203462\t3\t6709427\t6711592\t2165\t384\t61\tno\t2\ttxStart-txEnd\t5'UTR-3'UTR\t\t\t6709427\t6711592\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tIMH\t4:2823210-17706072;4:4005753-9642302;4:4006353-9641444;4:4041723-9068132;4:4151586-8958950\t0.1474\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t84.97\t0.629248196007981\t0.195831367621135\t0.447874019110796\t1.72296511806951\t0.620681882628763\t\t\t\t\t114932\tHGNC:28796\t\t\t\t\t\t8\t2.5481e-03\t8.9080e-03\t\t\tfull=5\n4_71553_9371067_DEL_1\t4\t71553\t9371067\t-9299515\tDEL\t4p- syndrom\tPathogenic\tNA\tsplit\tp16.1\tBLOC1S4\t\t\t\tNM_018366\t3\t6717900\t6719391\t1491\t654\t44\tno\t1\ttxStart-txEnd\t5'UTR-3'UTR\t\t\t6717900\t6719391\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tIMH\t4:2823210-17706072;4:4005753-9642302;4:4006353-9641444;4:4041723-9068132;4:4151586-8958950\t0.1474\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t72.47\t\t\t\t2.75338717063303\t1.98938453238048\t\t\t\t\t55330\tHGNC:24206\t\t\t\t\t\t9\t1.0151e-01\t1.5897e-01\t\t\tfull=5\n4_71553_9371067_DEL_1\t4\t71553\t9371067\t-9299515\tDEL\t4p- syndrom\tPathogenic\tNA\tsplit\tp16.1\tKIAA0232\t\t\t\tNM_001100590\t2\t6784453\t6885891\t101438\t4188\t100\tno\t9\ttxStart-txEnd\t5'UTR-3'UTR\t\t\t6784453\t6885891\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tIMH\t4:2823210-17706072;4:4005753-9642302;4:4006353-9641444;4:4041723-9068132;4:4151586-8958950\t0.1474\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t62.19\t0.495223937339359\t-0.201270287076057\t0.0915777485634488\t-1.04317795810088\t0.185259378880778\t\t\t\t\t9778\tHGNC:28992\t\t\t\t\t\t0\t9.9999e-01\t9.9472e-01\t\t\tfull=5\n4_71553_9371067_DEL_1\t4\t71553\t9371067\t-9299515\tDEL\t4p- syndrom\tPathogenic\tNA\tsplit\tp16.1\tTBC1D14\t\t\t\tNM_001113361\t2\t6911192\t7034841\t123649\t2082\t100\tno\t14\ttxStart-txEnd\t5'UTR-3'UTR\t\t\t6911192\t7034841\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tIMH\t4:2823210-17706072;4:4005753-9642302;4:4006353-9641444;4:4041723-9068132;4:4151586-8958950\t0.1474\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t58.66\t0.38643088540431\t0.788716334548764\t0.774883176364413\t-0.521938260031064\t1.10884704568458\t\t\t\t\t57533\tHGNC:29246\t\t\t\t\t\t2\t3.9267e-02\t9.0900e-01\t\t\tfull=5\n4_71553_9371067_DEL_1\t4\t71553\t9371067\t-9299515\tDEL\t4p- syndrom\tPathogenic\tNA\tsplit\tp16.1\tLOC100129931\t\t\t\tNR_033828\t1\t7032280\t7047958\t15678\t0\t0\tNA\t4\ttxStart-txEnd\tUTR\t\t\t7032280\t7047958\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tIMH\t4:2823210-17706072;4:4005753-9642302;4:4006353-9641444;4:4041723-9068132;4:4151586-8958950\t0.1474\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tfull=5\n4_71553_9371067_DEL_1\t4\t71553\t9371067\t-9299515\tDEL\t4p- syndrom\tPathogenic\tNA\tsplit\tp16.1\tCFAP184\t\t\t\tNM_153376\t3\t7042575\t7044728\t2153\t1668\t96\tno\t1\ttxStart-txEnd\t5'UTR-3'UTR\t\t\t7042575\t7044728\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tIMH\t4:2823210-17706072;4:4005753-9642302;4:4006353-9641444;4:4041723-9068132;4:4151586-8958950\t0.1474\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t257236\tHGNC:26900\t\t\t\t\t\t\t\t\t\t\tfull=5\n4_71553_9371067_DEL_1\t4\t71553\t9371067\t-9299515\tDEL\t4p- syndrom\tPathogenic\tNA\tsplit\tp16.1\tTADA2B\t\t\t\tNM_152293\t3\t7045098\t7059679\t14581\t1263\t100\tno\t2\ttxStart-txEnd\t5'UTR-3'UTR\t\t\t7045098\t7059679\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tIMH\t4:2823210-17706072;4:4005753-9642302;4:4006353-9641444;4:4041723-9068132;4:4151586-8958950\t0.1474\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t53.19\t0.052084742182682\t-0.284361515719772\t-0.145832700564166\t0.664832774210228\t4.02698047878354\t\t\t\t\t93624\tHGNC:30781\t\t\t\t\t\t2\t7.2366e-01\t3.4506e-01\t\t\tfull=5\n4_71553_9371067_DEL_1\t4\t71553\t9371067\t-9299515\tDEL\t4p- syndrom\tPathogenic\tNA\tsplit\tp16.1\tGRPEL1\t\t\t\tNM_025196\t4\t7060621\t7069791\t9170\t654\t100\tno\t4\ttxStart-txEnd\t5'UTR-3'UTR\t\t\t7060621\t7069791\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tIMH\t4:2823210-17706072;4:4005753-9642302;4:4006353-9641444;4:4041723-9068132;4:4151586-8958950\t0.1474\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t50.3\t0.649976625334672\t-1.27240513662323\t-0.777477966060391\t0.934834224809331\t0.303907421223287\t\t\t\t\t80273\tHGNC:19696\t\t\t\t\t\t4\t1.3916e-01\t8.9627e-01\t\t\tfull=5\n4_71553_9371067_DEL_1\t4\t71553\t9371067\t-9299515\tDEL\t4p- syndrom\tPathogenic\tNA\tsplit\tp16.1\tLINC02447\t\t\t\tNR_027441\t1\t7099150\t7105103\t5953\t0\t0\tNA\t2\ttxStart-txEnd\tUTR\t\t\t7099150\t7105103\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tIMH\t4:2823210-17706072;4:4005753-9642302;4:4006353-9641444;4:4041723-9068132;4:4151586-8958950\t0.1474\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t730971\tHGNC:53379\t\t\t\t\t\t\t\t\t\t\tfull=5\n4_71553_9371067_DEL_1\t4\t71553\t9371067\t-9299515\tDEL\t4p- syndrom\tPathogenic\tNA\tsplit\tp16.1\tSORCS2\t\t\t\tNM_020777\t3\t7194264\t7744554\t550290\t3480\t100\tno\t27\ttxStart-txEnd\t5'UTR-3'UTR\t\t\t7194264\t7744554\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tIMH\t4:2823210-17706072;4:4005753-9642302;4:4006353-9641444;4:4041723-9068132;4:4151586-8958950\t0.1474\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t69.5\t1.29231994213647\t0.27620541213653\t0.660060919341019\t-1.05139548669208\t0.853955018782722\t\t\t\t\t57537\tHGNC:16698\t\t\t\t\t\t2\t3.1696e-03\t2.6463e-03\t\t\tfull=5\n4_71553_9371067_DEL_1\t4\t71553\t9371067\t-9299515\tDEL\t4p- syndrom\tPathogenic\tNA\tsplit\tp16.1\tMIR4798\t\t\t\tNR_039961\t1\t7312176\t7312251\t75\t0\t0\tNA\t1\ttxStart-txEnd\tUTR\t\t\t7312176\t7312251\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tIMH\t4:2823210-17706072;4:4005753-9642302;4:4006353-9641444;4:4041723-9068132;4:4151586-8958950\t0.1474\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t100616471\tHGNC:41616\t\t\t\t\t\t\t\t\t\t\tfull=5\n4_71553_9371067_DEL_1\t4\t71553\t9371067\t-9299515\tDEL\t4p- syndrom\tPathogenic\tNA\tsplit\tp16.1\tPSAPL1\t\t\t\tNM_001085382\t2\t7432011\t7436657\t4646\t1566\t96\tno\t1\ttxStart-txEnd\t5'UTR-3'UTR\t\t\t7432011\t7436657\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tdbVar\tchr4:7313592-7549020\t0.01\t\t\t\tIMH\t4:2823210-17706072;4:4005753-9642302;4:4006353-9641444;4:4041723-9068132;4:4151586-8958950\t0.1474\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t96.06\t-0.246463271906552\t-0.572766431683099\t-0.498050358907741\t-1.4518704411588\t-1.9222533414192\t\t\t\t\t768239\tHGNC:33131\t\t\t\t\t\t\t\t3.3350e-11\t\t\tfull=5\n4_71553_9371067_DEL_1\t4\t71553\t9371067\t-9299515\tDEL\t4p- syndrom\tPathogenic\tNA\tsplit\tp16.1\tMIR4274\t\t\t\tNR_036238\t1\t7461754\t7461845\t91\t0\t0\tNA\t1\ttxStart-txEnd\tUTR\t\t\t7461754\t7461845\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tdbVar\tchr4:7313592-7549020\t0.01\t\t\t\tIMH\t4:2823210-17706072;4:4005753-9642302;4:4006353-9641444;4:4041723-9068132;4:4151586-8958950\t0.1474\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t100422826\tHGNC:38194\t\t\t\t\t\t\t\t\t\t\tfull=5\n4_71553_9371067_DEL_1\t4\t71553\t9371067\t-9299515\tDEL\t4p- syndrom\tPathogenic\tNA\tsplit\tp16.1\tAFAP1-AS1\t\t\t\tNR_026892\t1\t7755816\t7780655\t24839\t0\t0\tNA\t2\ttxStart-txEnd\tUTR\t\t\t7755816\t7780655\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tIMH\t4:2823210-17706072;4:4005753-9642302;4:4006353-9641444;4:4041723-9068132;4:4151586-8958950\t0.1474\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t84740\tHGNC:28141\t\t\t\t\t\t\t\t\t\t\tfull=5\n4_71553_9371067_DEL_1\t4\t71553\t9371067\t-9299515\tDEL\t4p- syndrom\tPathogenic\tNA\tsplit\tp16.1\tAFAP1\t\t\t\tNM_001134647\t2\t7760440\t7941588\t181148\t2445\t100\tno\t18\ttxStart-txEnd\t5'UTR-3'UTR\t\t\t7760440\t7941588\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tIMH\t4:2823210-17706072;4:4005753-9642302;4:4006353-9641444;4:4041723-9068132;4:4151586-8958950\t0.1474\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t70.06\t-2.62354415217069\t-0.232673834093773\t-1.98456571684452\t-1.13990389227529\t-0.987321027475765\t\t\t\t\t60312\tHGNC:24017\t\t\t\t\t\t3\t2.3828e-07\t3.7607e-01\t\t\tfull=5\n4_71553_9371067_DEL_1\t4\t71553\t9371067\t-9299515\tDEL\t4p- syndrom\tPathogenic\tNA\tsplit\tp16.1\tLOC389199\t\t\t\tNR_172651\t1\t7940727\t7942023\t1296\t0\t0\tNA\t1\ttxStart-txEnd\tUTR\t\t\t7940727\t7942023\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tIMH\t4:2823210-17706072;4:4005753-9642302;4:4006353-9641444;4:4041723-9068132;4:4151586-8958950\t0.1474\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tfull=5\n4_71553_9371067_DEL_1\t4\t71553\t9371067\t-9299515\tDEL\t4p- syndrom\tPathogenic\tNA\tsplit\tp16.1\tABLIM2\t\t\t\tNM_001130083\t2\t7967053\t8160540\t193487\t1938\t100\tno\t21\ttxStart-txEnd\t5'UTR-3'UTR\t\t\t7967053\t8160540\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tIMH\t4:2823210-17706072;4:4005753-9642302;4:4006353-9641444;4:4041723-9068132;4:4151586-8958950\t0.1474\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t63.64\t0.337838438332487\t-0.499016330621921\t-0.246989921895573\t-1.59029981969928\t-1.42113131036961\t\t\t\t\t84448\tHGNC:19195\t\t\t\t\t\t2\t4.5858e-03\t7.6242e-01\t\t\tfull=5\n4_71553_9371067_DEL_1\t4\t71553\t9371067\t-9299515\tDEL\t4p- syndrom\tPathogenic\tNA\tsplit\tp16.1\tMIR95\t\t\t\tNR_029511\t1\t8007027\t8007108\t81\t0\t0\tNA\t1\ttxStart-txEnd\tUTR\t\t\t8007027\t8007108\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tIMH\t4:2823210-17706072;4:4005753-9642302;4:4006353-9641444;4:4041723-9068132;4:4151586-8958950\t0.1474\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t407052\tHGNC:31647\t\t\t\t\t\t\t\t\t\t\tfull=5\n4_71553_9371067_DEL_1\t4\t71553\t9371067\t-9299515\tDEL\t4p- syndrom\tPathogenic\tNA\tsplit\tp16.1\tSH3TC1\t\t\t\tNM_018986\t5\t8201016\t8242830\t41814\t4011\t100\tno\t18\ttxStart-txEnd\t5'UTR-3'UTR\t\t\t8201016\t8242830\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tIMH\t4:2823210-17706072;4:4005753-9642302;4:4006353-9641444;4:4041723-9068132;4:4151586-8958950\t0.1474\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t89.77\t-0.370323251116391\t-0.462112374732113\t-0.471672769326771\t-2.08522134689875\t-3.42040819381878\t\t\t\t\t54436\tHGNC:26009\t\t\t\t\t\t7\t6.0939e-35\t1.0820e-27\t\t\tfull=5\n4_71553_9371067_DEL_1\t4\t71553\t9371067\t-9299515\tDEL\t4p- syndrom\tPathogenic\tNA\tsplit\tp16.1\tHTRA3\t\t\t\tNM_053044\t5\t8271480\t8308825\t37345\t1362\t100\tno\t9\ttxStart-txEnd\t5'UTR-3'UTR\t\t\t8271480\t8308825\t\t\t\t\t\t\t\tmorbid:HTRA3\t4:8271481-8308825\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tIMH\t4:2823210-17706072;4:4005753-9642302;4:4006353-9641444;4:4041723-9068132;4:4151586-8958950\t0.1474\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t70.02\t-0.536935947037787\t-0.623131034083341\t-0.644700690991608\t0.667359866413857\t1.21754776737995\t\t\t\t\t94031\tHGNC:30406\t\t\t\tyes\t\t6\t6.5843e-08\t1.7199e-05\t\t\tfull=5\n4_71553_9371067_DEL_1\t4\t71553\t9371067\t-9299515\tDEL\t4p- syndrom\tPathogenic\tNA\tsplit\tp16.1\tLINC02517\t\t\t\tNR_149125\t1\t8321902\t8325692\t3790\t0\t0\tNA\t4\ttxStart-txEnd\tUTR\t\t\t8321902\t8325692\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tIMH\t4:2823210-17706072;4:4005753-9642302;4:4006353-9641444;4:4041723-9068132;4:4151586-8958950\t0.1474\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t105374374\tHGNC:53506\t\t\t\t\t\t\t\t\t\t\tfull=5\n4_71553_9371067_DEL_1\t4\t71553\t9371067\t-9299515\tDEL\t4p- syndrom\tPathogenic\tNA\tsplit\tp16.1\tACOX3\t\t\t\tNM_003501\t3\t8368008\t8442450\t74442\t2103\t100\tno\t18\ttxStart-txEnd\t5'UTR-3'UTR\t\t\t8368008\t8442450\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tIMH\t4:2823210-17706072;4:4005753-9642302;4:4006353-9641444;4:4041723-9068132;4:4151586-8958950\t0.1474\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t82.99\t-2.37227679543374\t-0.95101441383295\t-1.44715983267575\t-0.00424238497735845\t-0.527819209746206\t\t\t\t\t8310\tHGNC:121\t\t\t\t\t\t5\t7.6016e-16\t3.0316e-12\t\t\tfull=5\n4_71553_9371067_DEL_1\t4\t71553\t9371067\t-9299515\tDEL\t4p- syndrom\tPathogenic\tNA\tsplit\tp16.1\tTRMT44\t\t\t\tNM_152544\t3\t8442503\t8478282\t35779\t2274\t100\tno\t11\ttxStart-txEnd\t5'UTR-3'UTR\t\t\t8442503\t8478282\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tIMH\t4:2823210-17706072;4:4005753-9642302;4:4006353-9641444;4:4041723-9068132;4:4151586-8958950\t0.1474\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t87.71\t-2.36525961978995\t-1.15479952515637\t-1.59282400997772\t-0.488109075837714\t-1.79889045378054\t\t\t\t\t152992\tHGNC:26653\t\t\t\t\t\t7\t2.0315e-22\t1.4776e-13\t\t\tfull=5\n4_71553_9371067_DEL_1\t4\t71553\t9371067\t-9299515\tDEL\t4p- syndrom\tPathogenic\tNA\tsplit\tp16.1\tGPR78\t\t\t\tNM_080819\t5\t8582118\t8591750\t9632\t1092\t100\tno\t3\ttxStart-txEnd\t5'UTR-3'UTR\t\t\t8582118\t8591750\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tIMH\t4:2823210-17706072;4:4005753-9642302;4:4006353-9641444;4:4041723-9068132;4:4151586-8958950\t0.1474\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t91.64\t-2.62354415217069\t-1.33186842996177\t-1.94147419136763\t-0.663631774481401\t-1.44235869751468\t\t\t\t\t27201\tHGNC:4528\t\t\t\t\t\t9\t2.6834e-06\t1.2826e-05\t\t\tfull=5\n4_71553_9371067_DEL_1\t4\t71553\t9371067\t-9299515\tDEL\t4p- syndrom\tPathogenic\tNA\tsplit\tp16.1\tCPZ\t\t\t\tNM_001014447\t3\t8594491\t8621479\t26988\t1959\t100\tno\t11\ttxStart-txEnd\t5'UTR-3'UTR\t\t\t8594491\t8621479\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tIMH\t4:2823210-17706072;4:4005753-9642302;4:4006353-9641444;4:4041723-9068132;4:4151586-8958950\t0.1474\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t75.68\t-2.62354415217069\t-1.41032367542656\t-1.95519140378666\t-2.6391793475309\t-5.33339017829433\t\t\t\t\t8532\tHGNC:2333\t\t\t\t\t\t9\t8.8063e-36\t4.5080e-21\t\t\tfull=5\n4_71553_9371067_DEL_1\t4\t71553\t9371067\t-9299515\tDEL\t4p- syndrom\tPathogenic\tNA\tsplit\tp16.1\tLOC101928532\t\t\t\tNR_187901\t1\t8747121\t8749448\t2327\t0\t0\tNA\t3\ttxStart-txEnd\tUTR\t\t\t8747121\t8749448\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tIMH\t4:2823210-17706072;4:4005753-9642302;4:4006353-9641444;4:4041723-9068132;4:4151586-8958950\t0.1474\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tfull=5\n4_71553_9371067_DEL_1\t4\t71553\t9371067\t-9299515\tDEL\t4p- syndrom\tPathogenic\tNA\tsplit\tp16.1\tHMX1\t\t\t\tNM_018942\t3\t8868773\t8873565\t4792\t1047\t100\tno\t2\ttxStart-txEnd\t5'UTR-3'UTR\t\t\t8868773\t8873565\t\t\t\t\t\tOculoauricular syndrome, 612109 (3) AR\t\tmorbid:HMX1\t4:8868774-8873565\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t1\tIsolated_microphthalmia_6\t\t\t\t\t\t\t\t\t\tIMH\t4:2823210-17706072;4:4005753-9642302;4:4006353-9641444;4:4041723-9068132;4:4151586-8958950\t0.1474\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t66.38\t\t\t\t1.46868520416757\t1.8176765127262\toculoauricular syndrome\tAR\tDefinitive;Strong;Supportive\t18423520;18423520[PMID]_25574057[PMID];19379485;25574057;29140751\t3166\tHGNC:5017\t142992\tOculoauricular syndrome, 612109 (3) AR\tAR\tyes\t\t3\t7.2623e-01\t1.2528e-01\t\t\tfull=5\n4_71553_9371067_DEL_1\t4\t71553\t9371067\t-9299515\tDEL\t4p- syndrom\tPathogenic\tNA\tsplit\tp16.1\tFAM90A26\t\t\t\tNM_001358418\t3\t9172134\t9178456\t6322\t1395\t100\tno\t7\ttxStart-txEnd\t5'UTR-3'UTR\t\t\t9172134\t9178456\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tDDD:12912;IMH;gnomAD-SV_v2.1_DUP_4_11165;gnomAD-SV_v2.1_DUP_4_11169;gnomAD-SV_v2.1_DUP_4_11174\t4:8951722-9487283;4:8952199-9486394;4:8958204-9492295;4:9009830-9541289;4:9043826-9467101\t0.1145\t1000g;DDD:12912;DDD:12915;dbVar;dgv923e199;esv3599566\t4:9043826-9467101;chr4:9157568-9214307;4:9157569-9214307;4:9157569-9214307;4:9158155-9232046;4:9160215-9232041\t1.0000\t\t\t\tIMH\t4:2823210-17706072;4:4005753-9642302;4:4006353-9641444\t0.1474\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t98.14\t\t\t\t\t\t\t\t\t\t100287045\tHGNC:43746\t\t\t\t\t\t9\t2.8656e-01\t\t\t\tfull=5\n4_71553_9371067_DEL_1\t4\t71553\t9371067\t-9299515\tDEL\t4p- syndrom\tPathogenic\tNA\tsplit\tp16.1\tUSP17L10\t\t\t\tNM_001256852\t1\t9212382\t9213975\t1593\t1593\t100\tno\t1\ttxStart-txEnd\t5'UTR-3'UTR\t\t\t9212382\t9213975\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tDDD:12912;DDD:12919;IMH;gnomAD-SV_v2.1_DUP_4_11165;gnomAD-SV_v2.1_DUP_4_11169;gnomAD-SV_v2.1_DUP_4_11174\t4:8951722-9487283;4:8952199-9486394;4:8958204-9492295;4:9009830-9541289;4:9043826-9467101;4:9176165-9236152\t0.1145\t1000g;DDD:12912;DDD:12915;DDD:12919;dbVar;dgv923e199;esv3599566\t4:9043826-9467101;chr4:9157568-9214307;4:9157569-9214307;4:9157569-9214307;4:9158155-9232046;4:9160215-9232041;4:9176165-9236152\t1.0000\t\t\t\tIMH\t4:2823210-17706072;4:4005753-9642302;4:4006353-9641444\t0.1474\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t88.87\t\t\t\t\t\t\t\t\t\t100287144\tHGNC:44438\t\t\t\t\t\t\t\t\t\t\tfull=5\n4_71553_9371067_DEL_1\t4\t71553\t9371067\t-9299515\tDEL\t4p- syndrom\tPathogenic\tNA\tsplit\tp16.1\tUSP17L11\t\t\t\tNM_001256854\t1\t9217130\t9218723\t1593\t1593\t100\tno\t1\ttxStart-txEnd\t5'UTR-3'UTR\t\t\t9217130\t9218723\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tDDD:12912;DDD:12919;DDD:12922;IMH;gnomAD-SV_v2.1_DUP_4_11165;gnomAD-SV_v2.1_DUP_4_11169;gnomAD-SV_v2.1_DUP_4_11174\t4:8951722-9487283;4:8952199-9486394;4:8958204-9492295;4:9009830-9541289;4:9043826-9467101;4:9176165-9236152;4:9212771-9237062\t0.1145\tDDD:12912;DDD:12915;DDD:12919;DDD:12922;dgv923e199\t4:9043826-9467101;4:9158155-9232046;4:9160215-9232041;4:9176165-9236152;4:9212771-9237062\t1.0000\t\t\t\tIMH\t4:2823210-17706072;4:4005753-9642302;4:4006353-9641444\t0.1474\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t92.38\t\t\t\t\t\t\t\t\t\t100287178\tHGNC:44439\t\t\t\t\t\t\t\t\t\t\tfull=5\n4_71553_9371067_DEL_1\t4\t71553\t9371067\t-9299515\tDEL\t4p- syndrom\tPathogenic\tNA\tsplit\tp16.1\tUSP17L12\t\t\t\tNM_001256853\t1\t9221877\t9223470\t1593\t1593\t100\tno\t1\ttxStart-txEnd\t5'UTR-3'UTR\t\t\t9221877\t9223470\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tDDD:12912;DDD:12919;DDD:12922;IMH;gnomAD-SV_v2.1_DUP_4_11165;gnomAD-SV_v2.1_DUP_4_11169;gnomAD-SV_v2.1_DUP_4_11174\t4:8951722-9487283;4:8952199-9486394;4:8958204-9492295;4:9009830-9541289;4:9043826-9467101;4:9176165-9236152;4:9212771-9237062\t0.1145\tDDD:12912;DDD:12915;DDD:12919;DDD:12922;dgv923e199\t4:9043826-9467101;4:9158155-9232046;4:9160215-9232041;4:9176165-9236152;4:9212771-9237062\t1.0000\t\t\t\tIMH\t4:2823210-17706072;4:4005753-9642302;4:4006353-9641444\t0.1474\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t91.28\t\t\t\t\t\t\t\t\t\t100287205\tHGNC:44440\t\t\t\t\t\t\t\t\t\t\tfull=5\n4_71553_9371067_DEL_1\t4\t71553\t9371067\t-9299515\tDEL\t4p- syndrom\tPathogenic\tNA\tsplit\tp16.1\tUSP17L13\t\t\t\tNM_001256855\t1\t9226621\t9228214\t1593\t1593\t100\tno\t1\ttxStart-txEnd\t5'UTR-3'UTR\t\t\t9226621\t9228214\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tDDD:12912;DDD:12919;DDD:12922;IMH;gnomAD-SV_v2.1_DUP_4_11165;gnomAD-SV_v2.1_DUP_4_11169;gnomAD-SV_v2.1_DUP_4_11174\t4:8951722-9487283;4:8952199-9486394;4:8958204-9492295;4:9009830-9541289;4:9043826-9467101;4:9176165-9236152;4:9212771-9237062\t0.1145\tDDD:12912;DDD:12915;DDD:12919;DDD:12922;dgv923e199\t4:9043826-9467101;4:9158155-9232046;4:9160215-9232041;4:9176165-9236152;4:9212771-9237062\t1.0000\t\t\t\tIMH\t4:2823210-17706072;4:4005753-9642302;4:4006353-9641444\t0.1474\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t93.57\t\t\t\t\t\t\t\t\t\t100287238\tHGNC:44441\t\t\t\t\t\t\t\t\t\t\tfull=5\n4_71553_9371067_DEL_1\t4\t71553\t9371067\t-9299515\tDEL\t4p- syndrom\tPathogenic\tNA\tsplit\tp16.1\tUSP17L15\t\t\t\tNM_001256894\t2\t9236110\t9237772\t1662\t1662\t100\tno\t1\ttxStart-txEnd\t5'UTR-3'UTR\t\t\t9236110\t9237772\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tDDD:12912;IMH;gnomAD-SV_v2.1_DUP_4_11165;gnomAD-SV_v2.1_DUP_4_11169;gnomAD-SV_v2.1_DUP_4_11174\t4:8951722-9487283;4:8952199-9486394;4:8958204-9492295;4:9009830-9541289;4:9043826-9467101\t0.1145\tDDD:12912\t4:9043826-9467101\t0.0130\t\t\t\tIMH\t4:2823210-17706072;4:4005753-9642302;4:4006353-9641444\t0.1474\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t88.6\t\t\t\t\t\t\t\t\t\t100288520\tHGNC:44443\t\t\t\t\t\t\t\t\t\t\tfull=5\n4_71553_9371067_DEL_1\t4\t71553\t9371067\t-9299515\tDEL\t4p- syndrom\tPathogenic\tNA\tsplit\tp16.1\tUSP17L17\t\t\t\tNM_001256857\t1\t9245604\t9247197\t1593\t1593\t100\tno\t1\ttxStart-txEnd\t5'UTR-3'UTR\t\t\t9245604\t9247197\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tDDD:12912;IMH;gnomAD-SV_v2.1_DUP_4_11165;gnomAD-SV_v2.1_DUP_4_11169;gnomAD-SV_v2.1_DUP_4_11174\t4:8951722-9487283;4:8952199-9486394;4:8958204-9492295;4:9009830-9541289;4:9043826-9467101\t0.1145\tDDD:12912\t4:9043826-9467101\t0.0130\t\t\t\tIMH\t4:2823210-17706072;4:4005753-9642302;4:4006353-9641444\t0.1474\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t91.84\t\t\t\t\t\t\t\t\t\t100287327\tHGNC:44445\t\t\t\t\t\t\t\t\t\t\tfull=5\n4_71553_9371067_DEL_1\t4\t71553\t9371067\t-9299515\tDEL\t4p- syndrom\tPathogenic\tNA\tsplit\tp16.1\tUSP17L18\t\t\t\tNM_001256859\t1\t9250355\t9251948\t1593\t1593\t100\tno\t1\ttxStart-txEnd\t5'UTR-3'UTR\t\t\t9250355\t9251948\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tDDD:12912;IMH;gnomAD-SV_v2.1_DUP_4_11165;gnomAD-SV_v2.1_DUP_4_11169;gnomAD-SV_v2.1_DUP_4_11174\t4:8951722-9487283;4:8952199-9486394;4:8958204-9492295;4:9009830-9541289;4:9043826-9467101\t0.1145\tDDD:12912\t4:9043826-9467101\t0.0130\t\t\t\tIMH\t4:2823210-17706072;4:4005753-9642302;4:4006353-9641444\t0.1474\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t91.4\t\t\t\t\t\t\t\t\t\t100287364\tHGNC:44446\t\t\t\t\t\t\t\t\t\t\tfull=5\n4_71553_9371067_DEL_1\t4\t71553\t9371067\t-9299515\tDEL\t4p- syndrom\tPathogenic\tNA\tsplit\tp16.1\tUSP17L19\t\t\t\tNM_001256860\t1\t9255103\t9256696\t1593\t1593\t100\tno\t1\ttxStart-txEnd\t5'UTR-3'UTR\t\t\t9255103\t9256696\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tDDD:12912;IMH;gnomAD-SV_v2.1_DUP_4_11165;gnomAD-SV_v2.1_DUP_4_11169;gnomAD-SV_v2.1_DUP_4_11174\t4:8951722-9487283;4:8952199-9486394;4:8958204-9492295;4:9009830-9541289;4:9043826-9467101\t0.1145\tDDD:12912\t4:9043826-9467101\t0.0130\t\t\t\tIMH\t4:2823210-17706072;4:4005753-9642302;4:4006353-9641444\t0.1474\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t89.82\t\t\t\t\t\t\t\t\t\t100287404\tHGNC:44447\t\t\t\t\t\t\t\t\t\t\tfull=5\n4_71553_9371067_DEL_1\t4\t71553\t9371067\t-9299515\tDEL\t4p- syndrom\tPathogenic\tNA\tsplit\tp16.1\tUSP17L20\t\t\t\tNM_001256861\t1\t9259849\t9261442\t1593\t1593\t100\tno\t1\ttxStart-txEnd\t5'UTR-3'UTR\t\t\t9259849\t9261442\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tDDD:12912;IMH;gnomAD-SV_v2.1_DUP_4_11165;gnomAD-SV_v2.1_DUP_4_11169;gnomAD-SV_v2.1_DUP_4_11174\t4:8951722-9487283;4:8952199-9486394;4:8958204-9492295;4:9009830-9541289;4:9043826-9467101\t0.1145\tDDD:12912\t4:9043826-9467101\t0.0130\t\t\t\tIMH\t4:2823210-17706072;4:4005753-9642302;4:4006353-9641444\t0.1474\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t92.3\t\t\t\t\t\t\t\t\t\t100287441\tHGNC:44448\t\t\t\t\t\t\t\t\t\t\tfull=5\n4_71553_9371067_DEL_1\t4\t71553\t9371067\t-9299515\tDEL\t4p- syndrom\tPathogenic\tNA\tsplit\tp16.1\tUSP17L21\t\t\t\tNM_001256862\t1\t9264597\t9266190\t1593\t1593\t100\tno\t1\ttxStart-txEnd\t5'UTR-3'UTR\t\t\t9264597\t9266190\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tDDD:12912;IMH;gnomAD-SV_v2.1_DUP_4_11165;gnomAD-SV_v2.1_DUP_4_11169;gnomAD-SV_v2.1_DUP_4_11174\t4:8951722-9487283;4:8952199-9486394;4:8958204-9492295;4:9009830-9541289;4:9043826-9467101\t0.1145\tDDD:12912\t4:9043826-9467101\t0.0130\t\t\t\tIMH\t4:2823210-17706072;4:4005753-9642302;4:4006353-9641444\t0.1474\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t93.14\t\t\t\t\t\t\t\t\t\t100287478\tHGNC:44449\t\t\t\t\t\t\t\t\t\t\tfull=5\n4_71553_9371067_DEL_1\t4\t71553\t9371067\t-9299515\tDEL\t4p- syndrom\tPathogenic\tNA\tsplit\tp16.1\tUSP17L22\t\t\t\tNM_001256863\t1\t9269344\t9270937\t1593\t1593\t100\tno\t1\ttxStart-txEnd\t5'UTR-3'UTR\t\t\t9269344\t9270937\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tDDD:12912;IMH;gnomAD-SV_v2.1_DUP_4_11165;gnomAD-SV_v2.1_DUP_4_11169;gnomAD-SV_v2.1_DUP_4_11174\t4:8951722-9487283;4:8952199-9486394;4:8958204-9492295;4:9009830-9541289;4:9043826-9467101\t0.1145\tDDD:12912\t4:9043826-9467101\t0.0130\t\t\t\tIMH\t4:2823210-17706072;4:4005753-9642302;4:4006353-9641444\t0.1474\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t90.3\t\t\t\t\t\t\t\t\t\t100287513\tHGNC:44450\t\t\t\t\t\t\t\t\t\t\tfull=5\n4_71553_9371067_DEL_1\t4\t71553\t9371067\t-9299515\tDEL\t4p- syndrom\tPathogenic\tNA\tsplit\tp16.1\tUSP17L24\t\t\t\tNM_001242327\t1\t9326890\t9328483\t1593\t1593\t100\tno\t1\ttxStart-txEnd\t5'UTR-3'UTR\t\t\t9326890\t9328483\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tDDD:12912;IMH;gnomAD-SV_v2.1_DUP_4_11165;gnomAD-SV_v2.1_DUP_4_11169;gnomAD-SV_v2.1_DUP_4_11174\t4:8951722-9487283;4:8952199-9486394;4:8958204-9492295;4:9009830-9541289;4:9043826-9467101\t0.1145\tDDD:12912\t4:9043826-9467101\t0.0130\t\t\t\tIMH\t4:2823210-17706072;4:4005753-9642302;4:4006353-9641444\t0.1474\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t94.26\t\t\t\t\t\t\t\t\t\t728369\tHGNC:44453\t\t\t\t\t\t\t\t\t\t\tfull=5\n4_71553_9371067_DEL_1\t4\t71553\t9371067\t-9299515\tDEL\t4p- syndrom\tPathogenic\tNA\tsplit\tp16.1\tUSP17L25\t\t\t\tNM_001242326\t1\t9331636\t9333229\t1593\t1593\t100\tno\t1\ttxStart-txEnd\t5'UTR-3'UTR\t\t\t9331636\t9333229\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tDDD:12912;IMH;gnomAD-SV_v2.1_DUP_4_11165;gnomAD-SV_v2.1_DUP_4_11169;gnomAD-SV_v2.1_DUP_4_11174\t4:8951722-9487283;4:8952199-9486394;4:8958204-9492295;4:9009830-9541289;4:9043826-9467101\t0.1145\tDDD:12912\t4:9043826-9467101\t0.0130\t\t\t\tIMH\t4:2823210-17706072;4:4005753-9642302;4:4006353-9641444\t0.1474\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t92.83\t\t\t\t\t\t\t\t\t\t728373\tHGNC:44452\t\t\t\t\t\t\t\t\t\t\tfull=5\n4_71553_9371067_DEL_1\t4\t71553\t9371067\t-9299515\tDEL\t4p- syndrom\tPathogenic\tNA\tsplit\tp16.1\tUSP17L26\t\t\t\tNM_001242328\t1\t9336383\t9337976\t1593\t1593\t100\tno\t1\ttxStart-txEnd\t5'UTR-3'UTR\t\t\t9336383\t9337976\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tDDD:12912;IMH;gnomAD-SV_v2.1_DUP_4_11165;gnomAD-SV_v2.1_DUP_4_11169;gnomAD-SV_v2.1_DUP_4_11174\t4:8951722-9487283;4:8952199-9486394;4:8958204-9492295;4:9009830-9541289;4:9043826-9467101\t0.1145\tDDD:12912\t4:9043826-9467101\t0.0130\t\t\t\tIMH\t4:2823210-17706072;4:4005753-9642302;4:4006353-9641444\t0.1474\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t92.3\t\t\t\t\t\t\t\t\t\t728379\tHGNC:44454\t\t\t\t\t\t\t\t\t\t\tfull=5\n4_71553_9371067_DEL_1\t4\t71553\t9371067\t-9299515\tDEL\t4p- syndrom\tPathogenic\tNA\tsplit\tp16.1\tUSP17L5\t\t\t\tNM_001242329\t1\t9341128\t9342721\t1593\t1593\t100\tno\t1\ttxStart-txEnd\t5'UTR-3'UTR\t\t\t9341128\t9342721\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tDDD:12912;IMH;gnomAD-SV_v2.1_DUP_4_11165;gnomAD-SV_v2.1_DUP_4_11169;gnomAD-SV_v2.1_DUP_4_11174\t4:8951722-9487283;4:8952199-9486394;4:8958204-9492295;4:9009830-9541289;4:9043826-9467101\t0.1145\tDDD:12912\t4:9043826-9467101\t0.0130\t\t\t\tIMH\t4:2823210-17706072;4:4005753-9642302;4:4006353-9641444\t0.1474\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t93.97\t\t\t\t\t\t\t\t\t\t728386\tHGNC:37177\t\t\t\t\t\t\t\t\t\t\tfull=5\n4_71553_9371067_DEL_1\t4\t71553\t9371067\t-9299515\tDEL\t4p- syndrom\tPathogenic\tNA\tsplit\tp16.1\tUSP17L27\t\t\t\tNM_001242330\t1\t9345873\t9347466\t1593\t1593\t100\tno\t1\ttxStart-txEnd\t5'UTR-3'UTR\t\t\t9345873\t9347466\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tDDD:12912;IMH;gnomAD-SV_v2.1_DUP_4_11165;gnomAD-SV_v2.1_DUP_4_11169;gnomAD-SV_v2.1_DUP_4_11174\t4:8951722-9487283;4:8952199-9486394;4:8958204-9492295;4:9009830-9541289;4:9043826-9467101\t0.1145\tDDD:12912\t4:9043826-9467101\t0.0130\t\t\t\tIMH\t4:2823210-17706072;4:4005753-9642302;4:4006353-9641444\t0.1474\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t94.31\t\t\t\t\t\t\t\t\t\t728393\tHGNC:44455\t\t\t\t\t\t\t\t\t\t\tfull=5\n4_71553_9371067_DEL_1\t4\t71553\t9371067\t-9299515\tDEL\t4p- syndrom\tPathogenic\tNA\tsplit\tp16.1\tUSP17L28\t\t\t\tNM_001242331\t1\t9350618\t9352211\t1593\t1593\t100\tno\t1\ttxStart-txEnd\t5'UTR-3'UTR\t\t\t9350618\t9352211\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tDDD:12912;IMH;gnomAD-SV_v2.1_DUP_4_11165;gnomAD-SV_v2.1_DUP_4_11169;gnomAD-SV_v2.1_DUP_4_11174\t4:8951722-9487283;4:8952199-9486394;4:8958204-9492295;4:9009830-9541289;4:9043826-9467101\t0.1145\tDDD:12912\t4:9043826-9467101\t0.0130\t\t\t\tIMH\t4:2823210-17706072;4:4005753-9642302;4:4006353-9641444\t0.1474\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t95.78\t\t\t\t\t\t\t\t\t\t728400\tHGNC:44456\t\t\t\t\t\t\t\t\t\t\tfull=5\n4_71553_9371067_DEL_1\t4\t71553\t9371067\t-9299515\tDEL\t4p- syndrom\tPathogenic\tNA\tsplit\tp16.1\tUSP17L29\t\t\t\tNM_001242332\t1\t9355363\t9356956\t1593\t1593\t100\tno\t1\ttxStart-txEnd\t5'UTR-3'UTR\t\t\t9355363\t9356956\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tDDD:12912;IMH;gnomAD-SV_v2.1_DUP_4_11165;gnomAD-SV_v2.1_DUP_4_11169;gnomAD-SV_v2.1_DUP_4_11174\t4:8951722-9487283;4:8952199-9486394;4:8958204-9492295;4:9009830-9541289;4:9043826-9467101\t0.1145\tDDD:12912\t4:9043826-9467101\t0.0130\t\t\t\tIMH\t4:2823210-17706072;4:4005753-9642302;4:4006353-9641444\t0.1474\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t94.78\t\t\t\t\t\t\t\t\t\t728405\tHGNC:44457\t\t\t\t\t\t\t\t\t\t\tfull=5\n4_71553_9371067_DEL_1\t4\t71553\t9371067\t-9299515\tDEL\t4p- syndrom\tPathogenic\tNA\tsplit\tp16.1\tUSP17L9P\t\t\t\tNR_046416\t1\t9360107\t9361700\t1593\t0\t0\tNA\t1\ttxStart-txEnd\tUTR\t\t\t9360107\t9361700\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tDDD:12912;IMH;gnomAD-SV_v2.1_DUP_4_11165;gnomAD-SV_v2.1_DUP_4_11169;gnomAD-SV_v2.1_DUP_4_11174\t4:8951722-9487283;4:8952199-9486394;4:8958204-9492295;4:9009830-9541289;4:9043826-9467101\t0.1145\tDDD:12912\t4:9043826-9467101\t0.0130\t\t\t\tIMH\t4:2823210-17706072;4:4005753-9642302;4:4006353-9641444\t0.1474\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t391627\tHGNC:12615\t\t\t\t\t\t\t\t\t\t\tfull=5\n4_71553_9371067_DEL_1\t4\t71553\t9371067\t-9299515\tDEL\t4p- syndrom\tPathogenic\tNA\tsplit\tp16.1\tUSP17L30\t\t\t\tNM_001256867\t1\t9364854\t9366447\t1593\t1593\t100\tno\t1\ttxStart-txEnd\t5'UTR-3'UTR\t\t\t9364854\t9366447\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tDDD:12912;IMH;gnomAD-SV_v2.1_DUP_4_11165;gnomAD-SV_v2.1_DUP_4_11169;gnomAD-SV_v2.1_DUP_4_11174\t4:8951722-9487283;4:8952199-9486394;4:8958204-9492295;4:9009830-9541289;4:9043826-9467101\t0.1145\tDDD:12912\t4:9043826-9467101\t0.0130\t\t\t\tIMH\t4:2823210-17706072;4:4005753-9642302;4:4006353-9641444\t0.1474\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t94.83\t\t\t\t\t\t\t\t\t\t728419\tHGNC:44458\t\t\t\t\t\t\t\t\t\t\tfull=5\n4_71553_9371067_DEL_1\t4\t71553\t9371067\t-9299515\tDEL\t4p- syndrom\tPathogenic\tNA\tsplit\tp16.1\tUSP17L6P\t\t\t\tNR_027279\t1\t9369599\t9370796\t1197\t0\t0\tNA\t1\ttxStart-txEnd\tUTR\t\t\t9369599\t9370796\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tDDD:12912;IMH;gnomAD-SV_v2.1_DUP_4_11165;gnomAD-SV_v2.1_DUP_4_11169;gnomAD-SV_v2.1_DUP_4_11174\t4:8951722-9487283;4:8952199-9486394;4:8958204-9492295;4:9009830-9541289;4:9043826-9467101\t0.1145\tDDD:12912\t4:9043826-9467101\t0.0130\t\t\t\tIMH\t4:2823210-17706072;4:4005753-9642302;4:4006353-9641444\t0.1474\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t391622\tHGNC:37179\t\t\t\t\t\t\t\t\t\t\tfull=5\n7_72726579_74139390_DEL_1\t7\t72726579\t74139390\t-1412812\tDEL\tWilliams syndrom\tPathogenic\tNA\tfull\tq11.23\tTRIM50;FKBP6;FZD9;BAZ1B;BCL7B;TBL2;MLXIPL;VPS37D;DNAJC30;BUD23;STX1A;MIR4284;BICDL3P;ABHD11;CLDN3;CLDN4;METTL27;TMEM270;ELN;ELN-AS1;LIMK1;EIF4H;MIR590;LAT2;RFC2;CLIP2;GTF2IRD1;MIR10525;GTF2I;GTF2I-AS1\tNSUN5\tNCF1\t30\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tACOX1 (morbid/RE=mTL_miRNA);AGO2 (morbid/RE=mTL_miRNA);AGTPBP1 (morbid/RE=mTL_miRNA);AHR (morbid/RE=mTL_miRNA);AKR1D1 (morbid/RE=mTL_miRNA);ALDH6A1 (morbid/RE=mTL_miRNA);ALDOA (morbid/RE=mTL_miRNA);APC (HI=3/morbid/RE=mTL_miRNA);APTX (morbid/RE=mTL_miRNA);ARSK (morbid/RE=mTL_miRNA);ATL3 (morbid/RE=mTL_miRNA);ATP13A3 (morbid/RE=mTL_miRNA);ATP6V0A2 (morbid/RE=mTL_miRNA);ATP6V1A (morbid/RE=mTL_miRNA);ATXN1 (morbid/RE=mTL_miRNA);BACH1 (morbid/RE=mTL_miRNA);BVES (morbid/RE=mTL_miRNA);C3 (morbid/RE=mTL_miRNA);CAPN15 (morbid/RE=mTL_miRNA);CASP10 (morbid/RE=mTL_miRNA);CD3D (morbid/RE=mTL_miRNA);CDC73 (HI=3/morbid/RE=mTL_miRNA);CDKN1B (HI=3/morbid/RE=mTL_miRNA);CHRNB1 (morbid/RE=mTL_miRNA);CIAO1 (morbid/RE=mTL_miRNA);CISD2 (morbid/RE=mTL_miRNA);CITED2 (morbid/RE=mTL_miRNA);CLEC7A (morbid/RE=mTL_miRNA);CLN8 (morbid/RE=mTL_miRNA);COL18A1 (morbid/RE=mTL_miRNA);COX20 (morbid/RE=mTL_miRNA);COX6B1 (morbid/RE=mTL_miRNA);CPE (morbid/RE=mTL_miRNA);CPT1A (morbid/RE=mTL_miRNA);CRIPT (morbid/RE=mTL_miRNA);CRTAP (morbid/RE=mTL_miRNA);CSNK1D (morbid/RE=mTL_miRNA);CTSB (morbid/RE=mTL_miRNA);CYCS (morbid/RE=mTL_miRNA);DARS2 (morbid/RE=mTL_miRNA);DBR1 (morbid/RE=mTL_miRNA);DNA2 (morbid/RE=mTL_miRNA);DNAAF3 (morbid/RE=mTL_miRNA);DNAJB13 (morbid/RE=mTL_miRNA);DNAJC3 (morbid/RE=mTL_miRNA);DSG3 (morbid/RE=mTL_miRNA);EDARADD (morbid/RE=mTL_miRNA);EIF2S3 (morbid/RE=mTL_miRNA);EIF4A2 (morbid/RE=mTL_miRNA);ELP2 (morbid/RE=mTL_miRNA)...\t\t\tdbVar:nssv15146175;nssv15148276;dbVar:nssv15146450;dbVar:nssv15147327;dbVar:nssv17955524;dbVar:nssv17976654\t7:72766114-74133473;7:72766313-74133327;7:72766314-74042787;7:72766314-74133332;7:73944169-74138459\tCutis laxa, AD, 123700 (3) AD;Supravalvar aortic stenosis, 185500 (3) AD;Leber-like hereditary optic neuropathy, AR 1, 619382 (3) AR;Spermatogenic failure 77, 620103 (3) AR\t\tHI3:ELN;dbVar:nssv15128343;dbVar:nssv15128578;dbVar:nssv15130113;dbVar:nssv15130169;dbVar:nssv15140244;dbVar:nssv15141480;dbVar:nssv15145649;nssv15146804;nssv15153080;dbVar:nssv15146451;dbVar:nssv15146687;dbVar:nssv15146708;dbVar:nssv15151951;nssv15605841;dbVar:nssv15167740;dbVar:nssv15770120;dbVar:nssv16208140;dbVar:nssv16213814;dbVar:nssv16214480;dbVar:nssv16214500;dbVar:nssv17172745;dbVar:nssv17172746;dbVar:nssv17955650;dbVar:nssv17971140;dbVar:nssv18786274;dbVar:nssv18791884;dbVar:nssv18791887;morbid:DNAJC30;morbid:ELN;morbid:FKBP6\t7:72726579-74139390;7:72742164-72772634;7:72766114-74133473;7:72766313-74133327;7:72766314-74133332;7:72772523-74133319;7:72996565-73597315;7:73023063-73524207;7:73095248-73097783;7:73150890-73604636;7:73187644-73501025;7:73442120-73484237;7:73442459-73483087;7:73442499-73442619;7:73442499-73483050;7:73442503-73484237;7:73442504-73484237;7:73442509-73483040;7:73442519-73449764;7:73442519-73483030;7:73444331-73476493;7:73449675-73483050;7:73461986-73483030;7:73470471-73498327;7:73471703-73483040;7:73482968-73483050;7:73482988-73484237;7:73791726-74133273\t\t\t\t\t7q11.23 recurrent (Williams-Beuren syndrome) region (includes ELN)\t\tdbVar:nssv15777247;dbVar:nssv15168013;dbVar:nssv15161666;nssv15161679;dbVar:nssv15168014;dbVar:nssv15146013;dbVar:nssv15146778;dbVar:nssv15147714;dbVar:nssv15147012;dbVar:nssv15147013;dbVar:nssv15755212;dbVar:nssv15147334;dbVar:nssv15151509;dbVar:nssv15154519;dbVar:nssv15152109;dbVar:nssv15153678;dbVar:nssv15148173;dbVar:nssv15149887;dbVar:nssv15147399;dbVar:nssv15148904;dbVar:nssv15174166;dbVar:nssv15128409;dbVar:nssv15150793;dbVar:nssv16254014;dbVar:nssv15148877;dbVar:nssv18830985;dbVar:nssv15147014;dbVar:nssv15149513;dbVar:nssv15146773;dbVar:nssv15151227;dbVar:nssv15147017;dbVar:nssv15146395;dbVar:nssv15147458;dbVar:nssv15126184;dbVar:nssv17976854;dbVar:nssv15150228;dbVar:nssv15147556;dbVar:nssv15146449;dbVar:nssv15151508;dbVar:nssv15150733;dbVar:nssv15154518;dbVar:nssv17955880;dbVar:nssv18830970;dbVar:nssv15146933;dbVar:nssv16215249;dbVar:nssv15167739;TS3:ISCA-37392;dbVar:nssv15148970\t7:10366-159119707;7:10705-159122532;7:43362-159119707;7:44936-159126310;7:62437464-75044630;7:71644078-78793387;7:71968213-74133332;7:72196406-74991125;7:72233836-74285345;7:72364527-73780265;7:72408603-74193374;7:72576873-74175429;7:72577022-74147166;7:72577022-74197846;7:72577022-74859638;7:72589516-74154603;7:72589516-74165401;7:72606410-74193403;7:72606410-74300084;7:72606451-74153206;7:72650008-74188572;7:72659675-74143240;7:72659675-74164894;7:72663963-74193403;7:72664462-74162586;7:72665463-74139573;7:72677174-74143140;7:72677302-74143060;7:72677302-74143240;7:72679398-74139573;7:72683245-74267189;7:72685735-74142327;7:72685764-74189674;7:72686959-74155067;7:72692113-74154497;7:72700128-74146858;7:72700415-74139573;7:72700525-74069858;7:72700525-74142256;7:72701019-74143240;7:72717346-74133310;7:72718278-74142256;7:72718279-74140708;7:72722982-74141840;7:72743984-74145064;7:72744456-74142510;7:72766314-74481540\t0.89;0.89;0.89;0.89;11.21;19.76;64.97;50.55;68.87;74.43;79.16;88.38;89.98;87.17;61.89;90.27;89.65;89.02;83.42;91.34;91.83;95.23;93.86;92.37;94.31;95.84;96.37;96.39;96.38;96.76;89.20;96.99;93.94;96.23;96.61;97.66;98.17;98.10;97.99;97.96;99.35;99.22;99.32;99.57;99.60;99.78;80.05\t7q11.23 recurrent (Williams-Beuren syndrome) region (includes ELN)\t\tdbVar:nssv15161318;dbVar:nssv15148211;dbVar:nssv15147057;dbVar:nssv15147200;dbVar:nssv16255682;dbVar:nssv15146320;dbVar:nssv15146676;dbVar:nssv16867365;dbVar:nssv15167734;dbVar:nssv15146211;dbVar:nssv16254015;dbVar:nssv15151112;dbVar:nssv15145801;dbVar:nssv15152099;dbVar:nssv17977008;dbVar:nssv15151511;dbVar:nssv17977009;dbVar:nssv15145887;dbVar:nssv15147427;dbVar:nssv15153677;dbVar:nssv15154521;dbVar:nssv16208139;dbVar:nssv15145827;dbVar:nssv15148206;dbVar:nssv15151289;dbVar:nssv18330757;dbVar:nssv15125131;dbVar:nssv17977011;dbVar:nssv15167735;dbVar:nssv15148192;dbVar:nssv15167736;dbVar:nssv15168977;dbVar:nssv18330770;dbVar:nssv16215159;dbVar:nssv15129678;dbVar:nssv15147158;dbVar:nssv15606134;dbVar:nssv15145898;dbVar:nssv15151092;dbVar:nssv15755220;dbVar:nssv17977017;dbVar:nssv15147160;dbVar:nssv15147159;dbVar:nssv15145802;dbVar:nssv15147457;dbVar:nssv15148226;dbVar:nssv15147515;dbVar:nssv15147502;dbVar:nssv15148195;dbVar:nssv15147550;dbVar:nssv17977015;dbVar:nssv15605840;dbVar:nssv17977014;dbVar:nssv15149859;dbVar:nssv17977016;dbVar:nssv15150016;dbVar:nssv15146951;dbVar:nssv16297072;dbVar:nssv18830737;dbVar:nssv15154517;nssv17977012;dbVar:nssv17977007;dbVar:nssv15146637;dbVar:nssv15149107;dbVar:nssv15150231;dbVar:nssv15150699;dbVar:nssv15150637;dbVar:nssv15151346;dbVar:nssv15148257;nssv17977121;dbVar:nssv15150643;dbVar:nssv15149860;dbVar:nssv15151090;dbVar:nssv18329614;dbVar:nssv18330419;dbVar:nssv18330223;dbVar:nssv15167737;dbVar:nssv15605774;dbVar:nssv8640006;dbVar:nssv15167738;dbVar:nssv15147726;dbVar:nssv15755221;HI3:ISCA-37392;dbVar:nssv15605838;dbVar:nssv15605839;dbVar:nssv15147324;dbVar:nssv15147329;dbVar:nssv15145670;dbVar:nssv15145679;nssv15146800;dbVar:nssv15146612;dbVar:nssv17977013;dbVar:nssv15124428;dbVar:nssv15776001;dbVar:nssv15120782;dbVar:nssv15148954;dbVar:nssv15147202\t7:54186-159075079;7:62196743-75061986;7:68133295-72806397;7:68847340-77453149;7:68977231-73939510;7:70690331-81364973;7:70926113-72806397;7:71847969-73391310;7:72305672-74196360;7:72401087-74285345;7:72403118-76709600;7:72456605-76007380;7:72507130-74142327;7:72536981-74629034;7:72589196-74225562;7:72589516-74386749;7:72589516-74629034;7:72606410-74193403;7:72606410-74285345;7:72608515-74386749;7:72612043-74574641;7:72621723-76007380;7:72636007-74339014;7:72637825-74203685;7:72643632-74142190;7:72643633-74143060;7:72644632-74144422;7:72645014-74142190;7:72650107-74138603;7:72650121-74142256;7:72650266-74138603;7:72653307-74134911;7:72654783-74142190;7:72657229-74160300;7:72677238-74144422;7:72681398-74137354;7:72682339-74141250;7:72685735-74142327;7:72691243-74142190;7:72699383-74142329;7:72700128-74142190;7:72700415-74122179;7:72700415-74137354;7:72700415-74139573;7:72700415-74142327;7:72700415-74172913;7:72700415-74193403;7:72700415-74285345;7:72700511-74142190;7:72700525-74141494;7:72700943-74142190;7:72700997-74142190;7:72700997-74142256;7:72701019-74141493;7:72701085-74142190;7:72708238-74133273;7:72708238-74339044;7:72717370-74142224;7:72717396-74173168;7:72718124-74141784;7:72718124-74142190;7:72718253-74133273;7:72718253-74133332;7:72718278-73898515;7:72718278-74141494;7:72718278-74141603;7:72718278-74141746;7:72718278-74142190;7:72718278-74146858;7:72718278-74259899;7:72718278-74287433;7:72718279-74142256;7:72718279-74143060;7:72718279-74143240;7:72719387-74218536;7:72721450-73959106;7:72722982-74141840;7:72722982-74200092;7:72722982-74217390;7:72726591-74142329;7:72744456-74142510;7:72744495-74339044;7:72744495-76038818;7:72766313-74193397;7:72766313-74339030;7:72766314-74285345;7:72766314-74339044;7:72766314-76351578;7:72921551-74145628;7:73591994-75914797;7:73799887-75388031;7:73992745-74991125;7:73992745-81661058;7:73992745-83618176\t0.89;10.98;1.71;16.42;24.44;13.24;4.25;43.07;74.72;74.98;32.81;39.79;86.40;67.53;86.34;78.61;69.27;89.02;84.15;79.45;71.99;41.73;82.96;90.23;94.28;94.22;94.20;94.37;94.86;94.68;94.87;95.05;94.98;93.99;96.29;96.90;96.84;96.99;97.37;97.91;97.97;98.16;98.18;98.17;97.98;95.95;94.63;89.14;98.00;98.05;98.03;98.03;98.03;98.08;98.04;98.71;86.63;99.15;97.05;99.24;99.21;99.41;99.41;99.30;99.27;99.26;99.25;99.22;98.90;91.64;90.04;99.22;99.16;99.15;94.24;99.59;99.57;95.65;94.54;99.79;99.78;87.48;42.34;96.22;87.31;90.39;87.31;38.30;99.49;23.57;21.38;14.69;1.91;1.52\t127\tAutism;Cutis_laxa,_autosomal_dominant_1;DNAJC30-associated_disorder;ELN-related_disorder;Inborn_genetic_diseases;Intellectual_disability;Leber-like_hereditary_optic_neuropathy,_autosomal_recessive_1;Leber_hereditary_optic_neuropathy,_autosomal_recessive;Leber_optic_atrophy,_susceptibility_to;Male_infertility;Optic_atrophy;Retinal_dystrophy;Spermatogenic_failure_77;Supravalvar_aortic_stenosis;Williams_syndrome\t\t\t\t\t\t\t\t\t\tIMH\t7:66631329-143298938;7:67635774-98083201\t0.5000\t\t\t7:74110032-74113459 DDD:24519;\t7:74103674-74113108 DDD:24517;7:74111368-74111473 DDD:24520\t\t\tchr7:72788610-72788928 dbVar;chr7:72792927-72794734 dbVar;chr7:72807457-72811747 dbVar;chr7:72809374-72811765 dbVar;chr7:72831507-72833102 dbVar;chr7:72831655-72833172 dbVar;7:72859067-72859930 DDD:24502;chr7:72859126-72859948 dbVar;chr7:72958486-72958582 dbVar;chr7:72976072-72983729 dbVar;chr7:73003322-73003446 dbVar;chr7:73047101-73047474 dbVar;chr7:73062999-73081000 dbVar;chr7:73072977-73073093 dbVar;chr7:73106347-73106427 dbVar;chr7:73157999-73206000 dbVar;chr7:73190196-73190548 dbVar;chr7:73196830-73198271 dbVar;chr7:73211482-73211654 dbVar;chr7:73223050-73223264 dbVar...\tchr7:72783921-72784587 dbVar;chr7:72790491-72790586 dbVar;chr7:72806431-72813279 dbVar;chr7:72809373-72811754 dbVar;7:72809386-72811787 DDD:24500;7:72831554-72833141 DDD:24501;chr7:72850871-72854146 dbVar;chr7:72859093-72859952 dbVar;chr7:72955017-72955274 dbVar;chr7:72962422-72963182 dbVar;chr7:73002815-73002896 dbVar;chr7:73023279-73023954 dbVar;chr7:73054513-73055107 dbVar;chr7:73065479-73067124 dbVar;chr7:73090809-73093167 dbVar;chr7:73146454-73146754 dbVar;chr7:73173329-73173399 dbVar;chr7:73196779-73198220 dbVar;chr7:73211482-73211632 dbVar;chr7:73222000-73236000 dbVar...\t0.370\t0.355\t7:72726181-72726486\tAluSz\t\t\t\t\t7:72700438-72744454;7:72700443-72744454\t\t\t\t\t\t\t3\t\t88.46\t1.77201404347458\t0.0159631069818757\t0.491444562429841\t2.70903614483931\t4.23220859072885\t\t\t\t\t\t\t604839;618202;130160\t\t\tyes\t\t0\t1.0000e+00\t1.0000e+00\t1.45\t1A (cf Gene_count, RE_gene, +0.00);2A (cf P_loss_source, +1.00);3B (30 genes, +0.45);5F (+0.00)\t5\n7_72726579_74139390_DEL_1\t7\t72726579\t74139390\t-1412812\tDEL\tWilliams syndrom\tPathogenic\tNA\tsplit\tq11.23\tTRIM50\t\t\t\tNM_178125\t3\t72726531\t72742085\t15507\t1464\t100\tno\t7\ttxStart-exon7\t5'UTR-3'UTR\t928\t3'\t72726578\t72742085\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tIMH\t7:66631329-143298938;7:67635774-98083201\t0.5000\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t55.55\t\t\t\t0.317380023327075\t0.681275321847818\t\t\t\t\t135892\tHGNC:19017\t\t\t\t\t\t7\t1.5479e-10\t2.7256e-06\t\t\tfull=5\n7_72726579_74139390_DEL_1\t7\t72726579\t74139390\t-1412812\tDEL\tWilliams syndrom\tPathogenic\tNA\tsplit\tq11.23\tFKBP6\t\t\t\tNM_003602\t5\t72742163\t72772634\t30471\t984\t100\tno\t9\ttxStart-txEnd\t5'UTR-3'UTR\t\t\t72742163\t72772634\t\t\t\t\t\tSpermatogenic failure 77, 620103 (3) AR\t\tmorbid:FKBP6\t7:72742164-72772634\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t1\tMale_infertility;Spermatogenic_failure_77\t\t\t\t\t\t\t\t\t\tIMH\t7:66631329-143298938;7:67635774-98083201\t0.5000\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t65.69\t\t\t\t1.49986407027643\t1.4396607305099\tspermatogenic failure 77\tAR\tModerate\t\t8468\tHGNC:3722\t604839\tSpermatogenic failure 77, 620103 (3) AR\tAR\tyes\t\t5\t1.3955e-06\t1.3060e-01\t\t\tfull=5\n7_72726579_74139390_DEL_1\t7\t72726579\t74139390\t-1412812\tDEL\tWilliams syndrom\tPathogenic\tNA\tsplit\tq11.23\tFZD9\t\t\t\tNM_003508\t3\t72848107\t72850450\t2343\t1776\t84\tno\t1\ttxStart-txEnd\t5'UTR-3'UTR\t\t\t72848107\t72850450\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tIMH\t7:66631329-143298938;7:67635774-98083201\t0.5000\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t46.95\t0.247827425263201\t-1.18776035129969\t-0.895389454591556\t\t\t\t\t\t\t8326\tHGNC:4047\t\t\t\t\t\t4\t1.9309e-03\t\t\t\tfull=5\n7_72726579_74139390_DEL_1\t7\t72726579\t74139390\t-1412812\tDEL\tWilliams syndrom\tPathogenic\tNA\tsplit\tq11.23\tBAZ1B\t\t\t\tNM_001370402\t1\t72854735\t72936623\t81888\t4452\t100\tno\t19\ttxStart-txEnd\t5'UTR-3'UTR\t\t\t72854735\t72936623\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tIMH\t7:66631329-143298938;7:67635774-98083201\t0.5000\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t23.74\t1.02239565516008\t0.0159631069818757\t0.395552906953086\t-0.902054979760057\t4.05717005254254\tautism spectrum disorder\tAD\tLimited\t\t9031\tHGNC:961\t\t\t\t\t\t0\t1.0000e+00\t1.0000e+00\t\t\tfull=5\n7_72726579_74139390_DEL_1\t7\t72726579\t74139390\t-1412812\tDEL\tWilliams syndrom\tPathogenic\tNA\tsplit\tq11.23\tBCL7B\t\t\t\tNM_001301061\t2\t72950685\t72972020\t21335\t642\t100\tno\t7\ttxStart-txEnd\t5'UTR-3'UTR\t\t\t72950685\t72972020\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tIMH\t7:66631329-143298938;7:67635774-98083201\t0.5000\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t28.63\t1.05583278690403\t-0.553040364632404\t-0.0819162539430506\t-0.44503506022657\t1.74981493260157\t\t\t\t\t9275\tHGNC:1005\t\t\t\t\t\t3\t1.8519e-01\t7.0664e-01\t\t\tfull=5\n7_72726579_74139390_DEL_1\t7\t72726579\t74139390\t-1412812\tDEL\tWilliams syndrom\tPathogenic\tNA\tsplit\tq11.23\tTBL2\t\t\t\tNM_012453\t4\t72981866\t72992909\t11043\t1344\t100\tno\t7\ttxStart-txEnd\t5'UTR-3'UTR\t\t\t72981866\t72992909\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tIMH\t7:66631329-143298938;7:67635774-98083201\t0.5000\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t30.81\t-0.199291215312469\t-0.922199212243606\t-0.751016280020485\t0.200201742907301\t0.554223709974506\t\t\t\t\t26608\tHGNC:11586\t\t\t\t\t\t4\t1.8452e-04\t4.3765e-03\t\t\tfull=5\n7_72726579_74139390_DEL_1\t7\t72726579\t74139390\t-1412812\tDEL\tWilliams syndrom\tPathogenic\tNA\tsplit\tq11.23\tMLXIPL\t\t\t\tNM_032951\t3\t73007531\t73038852\t31321\t2559\t100\tno\t17\ttxStart-txEnd\t5'UTR-3'UTR\t\t\t73007531\t73038852\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tIMH\t7:66631329-143298938;7:67635774-98083201\t0.5000\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t36.45\t0.942636989769333\t-0.774220086661663\t-0.327638361779731\t0.58127606528246\t1.2288879277127\t\t\t\t\t51085\tHGNC:12744\t\t\t\t\t\t2\t4.7771e-02\t6.7682e-01\t\t\tfull=5\n7_72726579_74139390_DEL_1\t7\t72726579\t74139390\t-1412812\tDEL\tWilliams syndrom\tPathogenic\tNA\tsplit\tq11.23\tVPS37D\t\t\t\tNM_001077621\t2\t73082160\t73086440\t4280\t756\t100\tno\t4\ttxStart-txEnd\t5'UTR-3'UTR\t\t\t73082160\t73086440\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tIMH\t7:66631329-143298938;7:67635774-98083201\t0.5000\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t64.11\t\t\t\t-0.0288746954043306\t0.953055172354045\t\t\t\t\t155382\tHGNC:18287\t\t\t\t\t\t1\t9.1622e-01\t6.5635e-01\t\t\tfull=5\n7_72726579_74139390_DEL_1\t7\t72726579\t74139390\t-1412812\tDEL\tWilliams syndrom\tPathogenic\tNA\tsplit\tq11.23\tDNAJC30\t\t\t\tNM_032317\t3\t73095247\t73097783\t2536\t681\t95\tno\t1\ttxStart-txEnd\t5'UTR-3'UTR\t\t\t73095247\t73097783\t\t\t\t\t\tLeber-like hereditary optic neuropathy, AR 1, 619382 (3) AR\t\tmorbid:DNAJC30\t7:73095248-73097783\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t1\tDNAJC30-associated_disorder;Leber-like_hereditary_optic_neuropathy,_autosomal_recessive_1;Leber_hereditary_optic_neuropathy,_autosomal_recessive;Leber_optic_atrophy,_susceptibility_to;Optic_atrophy;Retinal_dystrophy\t\t\t\t\t\t\t\t\t\tIMH\t7:66631329-143298938;7:67635774-98083201\t0.5000\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t80.16\t0.717396479665947\t-0.500797326082256\t-0.15204008716984\t1.08623431117684\t1.71697083676563\tLeber hereditary optic neuropathy;Leber hereditary optic neuropathy, autosomal recessive\tAR;MT\tLimited;Strong;Supportive\t33465056;33465056[PMID]\t84277\tHGNC:16410\t618202\tLeber-like hereditary optic neuropathy, AR 1, 619382 (3) AR\tAR\tyes\t\t7\t2.3092e-02\t4.7983e-03\t\t\tfull=5\n7_72726579_74139390_DEL_1\t7\t72726579\t74139390\t-1412812\tDEL\tWilliams syndrom\tPathogenic\tNA\tsplit\tq11.23\tBUD23\t\t\t\tNM_001202560\t3\t73097926\t73112542\t14616\t897\t100\tno\t13\ttxStart-txEnd\t5'UTR-3'UTR\t\t\t73097926\t73112542\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tIMH\t7:66631329-143298938;7:67635774-98083201\t0.5000\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t114049\tHGNC:16405\t\t\t\t\t\t\t\t\t\t\tfull=5\n7_72726579_74139390_DEL_1\t7\t72726579\t74139390\t-1412812\tDEL\tWilliams syndrom\tPathogenic\tNA\tsplit\tq11.23\tSTX1A\t\t\t\tNM_004603\t4\t73113539\t73133999\t20460\t867\t100\tno\t10\ttxStart-txEnd\t5'UTR-3'UTR\t\t\t73113539\t73133999\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t1\tAutism;Intellectual_disability\t\t\t\t\t\t\t\t\t\tIMH\t7:66631329-143298938;7:67635774-98083201\t0.5000\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t22.82\t0.950800964625408\t-0.794674734358171\t-0.324619004824717\t1.10438995088098\t3.33806479625907\tcystic fibrosis\tAR\tSupportive\t23572023\t6804\tHGNC:11433\t\t\t\t\t\t1\t9.7850e-01\t9.1048e-01\t\t\tfull=5\n7_72726579_74139390_DEL_1\t7\t72726579\t74139390\t-1412812\tDEL\tWilliams syndrom\tPathogenic\tNA\tsplit\tq11.23\tMIR4284\t\t\t\tNR_036247\t1\t73125646\t73125727\t81\t0\t0\tNA\t1\ttxStart-txEnd\tUTR\t\t\t73125646\t73125727\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tIMH\t7:66631329-143298938;7:67635774-98083201\t0.5000\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t100422948\tHGNC:38322\t\t\t\t\t\t\t\t\t\t\tfull=5\n7_72726579_74139390_DEL_1\t7\t72726579\t74139390\t-1412812\tDEL\tWilliams syndrom\tPathogenic\tNA\tsplit\tq11.23\tBICDL3P\t\t\t\tNR_026690\t1\t73149398\t73150330\t932\t0\t0\tNA\t4\ttxStart-txEnd\tUTR\t\t\t73149398\t73150330\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tIMH\t7:66631329-143298938;7:67635774-98083201\t0.5000\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t171022\tHGNC:18289\t\t\t\t\t\t\t\t\t\t\tfull=5\n7_72726579_74139390_DEL_1\t7\t72726579\t74139390\t-1412812\tDEL\tWilliams syndrom\tPathogenic\tNA\tsplit\tq11.23\tABHD11\t\t\t\tNM_148912\t4\t73150423\t73153132\t2709\t921\t100\tno\t6\ttxStart-txEnd\t5'UTR-3'UTR\t\t\t73150423\t73153132\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tIMH\t7:66631329-143298938;7:67635774-98083201\t0.5000\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t76.55\t0.643446275430498\t-0.675433866559718\t-0.327510119466819\t1.09331776236833\t0.473373375061211\t\t\t\t\t83451\tHGNC:16407\t\t\t\t\t\t5\t2.9581e-03\t9.0329e-06\t\t\tfull=5\n7_72726579_74139390_DEL_1\t7\t72726579\t74139390\t-1412812\tDEL\tWilliams syndrom\tPathogenic\tNA\tsplit\tq11.23\tCLDN3\t\t\t\tNM_001306\t4\t73183326\t73184600\t1274\t663\t75\tno\t1\ttxStart-txEnd\t5'UTR-3'UTR\t\t\t73183326\t73184600\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tdbVar\tchr7:73157999-73206000\t0.01\t\t\t\tIMH\t7:66631329-143298938;7:67635774-98083201\t0.5000\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t33.46\t0.332553044404404\t-0.966715148489597\t-0.688425296234703\t2.70903614483931\t1.92914089110849\t\t\t\t\t1365\tHGNC:2045\t\t\t\t\t\t4\t5.2233e-01\t6.7854e-01\t\t\tfull=5\n7_72726579_74139390_DEL_1\t7\t72726579\t74139390\t-1412812\tDEL\tWilliams syndrom\tPathogenic\tNA\tsplit\tq11.23\tCLDN4\t\t\t\tNM_001305\t5\t73245325\t73247020\t1695\t630\t42\tno\t1\ttxStart-txEnd\t5'UTR-3'UTR\t\t\t73245325\t73247020\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tIMH\t7:66631329-143298938;7:67635774-98083201\t0.5000\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t23.72\t0.563064431580096\t-0.809178554455325\t-0.46244511082827\t-0.0167724140747313\t0.933080799622852\t\t\t\t\t1364\tHGNC:2046\t\t\t\t\t\t9\t6.9789e-05\t1.3716e-04\t\t\tfull=5\n7_72726579_74139390_DEL_1\t7\t72726579\t74139390\t-1412812\tDEL\tWilliams syndrom\tPathogenic\tNA\tsplit\tq11.23\tMETTL27\t\t\t\tNM_152559\t3\t73248919\t73256846\t7927\t738\t100\tno\t6\ttxStart-txEnd\t5'UTR-3'UTR\t\t\t73248919\t73256846\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tIMH\t7:66631329-143298938;7:67635774-98083201\t0.5000\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t155368\tHGNC:19068\t\t\t\t\t\t\t\t\t\t\tfull=5\n7_72726579_74139390_DEL_1\t7\t72726579\t74139390\t-1412812\tDEL\tWilliams syndrom\tPathogenic\tNA\tsplit\tq11.23\tTMEM270\t\t\t\tNM_182504\t4\t73275488\t73280220\t4732\t798\t100\tno\t3\ttxStart-txEnd\t5'UTR-3'UTR\t\t\t73275488\t73280220\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tIMH\t7:66631329-143298938;7:67635774-98083201\t0.5000\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t135886\tHGNC:23018\t\t\t\t\t\t\t\t\t\t\tfull=5\n7_72726579_74139390_DEL_1\t7\t72726579\t74139390\t-1412812\tDEL\tWilliams syndrom\tPathogenic\tNA\tsplit\tq11.23\tELN\t\t\t\tNM_001278939\t2\t73442502\t73484237\t41735\t2361\t100\tno\t34\ttxStart-txEnd\t5'UTR-3'UTR\t\t\t73442502\t73484237\t\t\t\t\t\tCutis laxa, AD, 123700 (3) AD;Supravalvar aortic stenosis, 185500 (3) AD\t\tHI3:ELN;dbVar:nssv15128578;dbVar:nssv15770120;dbVar:nssv16214480;dbVar:nssv16214500;dbVar:nssv17172746;dbVar:nssv17971140;dbVar:nssv18786274;dbVar:nssv18791884;dbVar:nssv18791887;morbid:ELN\t7:73442503-73484237;7:73442504-73484237;7:73442509-73483040;7:73442519-73449764;7:73442519-73483030;7:73444331-73476493;7:73449675-73483050;7:73461986-73483030;7:73471703-73483040;7:73482968-73483050;7:73482988-73484237\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t124\tCutis_laxa,_autosomal_dominant_1;ELN-related_disorder;Inborn_genetic_diseases;Supravalvar_aortic_stenosis;Williams_syndrome\t\t\t\t\t\t\t\t\t\tIMH\t7:66631329-143298938;7:67635774-98083201\t0.5000\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t3\t0\t8.62\t0.1188507761401\t-1.61408470478924\t-1.04153334326364\t-0.09395744769762\t-0.0129976080826519\tautosomal dominant cutis laxa;cutis laxa, autosomal dominant 1;familial thoracic aortic aneurysm and aortic dissection;supravalvular aortic stenosis\tAD\tDefinitive;Limited;Strong;Supportive\t10942104[PMID]_19844261[PMID];11175284;16085695[PMID]_18348261[PMID];18348261;19844261;21309044;23442826;27866049;28383366;31560829;8364568\t2006\tHGNC:3327\t130160\tCutis laxa, AD, 123700 (3) AD;Supravalvar aortic stenosis, 185500 (3) AD\tAD\tyes\t\t4\t2.1429e-14\t1.5200e-05\t\t\tfull=5\n7_72726579_74139390_DEL_1\t7\t72726579\t74139390\t-1412812\tDEL\tWilliams syndrom\tPathogenic\tNA\tsplit\tq11.23\tELN-AS1\t\t\t\tNR_183555\t1\t73473234\t73476610\t3376\t0\t0\tNA\t2\ttxStart-txEnd\tUTR\t\t\t73473234\t73476610\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t18\tCutis_laxa,_autosomal_dominant_1;ELN-related_disorder;Supravalvar_aortic_stenosis\t\t\t\tdbVar\tchr7:73447215-73480401\t0.01\t\t\t\tIMH\t7:66631329-143298938;7:67635774-98083201\t0.5000\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t107986809\tHGNC:40212\t\t\t\t\t\t\t\t\t\t\tfull=5\n7_72726579_74139390_DEL_1\t7\t72726579\t74139390\t-1412812\tDEL\tWilliams syndrom\tPathogenic\tNA\tsplit\tq11.23\tLIMK1\t\t\t\tNM_002314\t4\t73498133\t73536855\t38722\t1944\t100\tno\t16\ttxStart-txEnd\t5'UTR-3'UTR\t\t\t73498133\t73536855\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tIMH\t7:66631329-143298938;7:67635774-98083201\t0.5000\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t0\t0\t19.66\t0.623604739936053\t-0.79212126645541\t-0.396805714672051\t-0.48782967368913\t2.85746490313868\t\t\t\t\t3984\tHGNC:6613\t\t\t\t\t\t0\t9.9937e-01\t9.9090e-01\t\t\tfull=5\n7_72726579_74139390_DEL_1\t7\t72726579\t74139390\t-1412812\tDEL\tWilliams syndrom\tPathogenic\tNA\tsplit\tq11.23\tEIF4H\t\t\t\tNM_022170\t2\t73588685\t73611426\t22741\t747\t100\tno\t7\ttxStart-txEnd\t5'UTR-3'UTR\t\t\t73588685\t73611426\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tdbVar\tchr7:73504792-73813060\t0.01\t\t\t\tIMH\t7:66631329-143298938;7:67635774-98083201\t0.5000\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t21.78\t0.339580839486745\t-0.49261121282204\t-0.247951312124761\t-0.250271670703448\t3.27930650064444\t\t\t\t\t7458\tHGNC:12741\t\t\t\t\t\t2\t4.3982e-01\t9.2254e-01\t\t\tfull=5\n7_72726579_74139390_DEL_1\t7\t72726579\t74139390\t-1412812\tDEL\tWilliams syndrom\tPathogenic\tNA\tsplit\tq11.23\tMIR590\t\t\t\tNR_030321\t1\t73605527\t73605624\t97\t0\t0\tNA\t1\ttxStart-txEnd\tUTR\t\t\t73605527\t73605624\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tdbVar\tchr7:73504792-73813060\t0.01\t\t\t\tIMH\t7:66631329-143298938;7:67635774-98083201\t0.5000\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t693175\tHGNC:32846\t\t\t\t\t\t\t\t\t\t\tfull=5\n7_72726579_74139390_DEL_1\t7\t72726579\t74139390\t-1412812\tDEL\tWilliams syndrom\tPathogenic\tNA\tsplit\tq11.23\tLAT2\t\t\t\tNM_014146\t4\t73624335\t73644164\t19829\t732\t100\tno\t13\ttxStart-txEnd\t5'UTR-3'UTR\t\t\t73624335\t73644164\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tdbVar\tchr7:73504792-73813060\t0.01\t\t\t\tIMH\t7:66631329-143298938;7:67635774-98083201\t0.5000\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t88.46\t0.592710857132059\t-0.653878691847743\t-0.292110083865967\t0.385787155434006\t-0.303087706786894\t\t\t\t\t7462\tHGNC:12749\t\t\t\t\t\t4\t2.2295e-04\t6.9106e-04\t\t\tfull=5\n7_72726579_74139390_DEL_1\t7\t72726579\t74139390\t-1412812\tDEL\tWilliams syndrom\tPathogenic\tNA\tsplit\tq11.23\tRFC2\t\t\t\tNM_181471\t3\t73645831\t73668729\t22898\t1065\t100\tno\t11\ttxStart-txEnd\t5'UTR-3'UTR\t\t\t73645831\t73668729\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tdbVar\tchr7:73504792-73813060\t0.01\t\t\t\tIMH\t7:66631329-143298938;7:67635774-98083201\t0.5000\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t14.42\t0.200864992787726\t-0.430045328414053\t-0.225638310792768\t-0.430513909559958\t1.53581142075512\t\t\t\t\t5982\tHGNC:9970\t\t\t\t\t\t5\t2.2054e-06\t4.0421e-05\t\t\tfull=5\n7_72726579_74139390_DEL_1\t7\t72726579\t74139390\t-1412812\tDEL\tWilliams syndrom\tPathogenic\tNA\tsplit\tq11.23\tCLIP2\t\t\t\tNM_003388\t5\t73703736\t73820265\t116529\t3141\t100\tno\t17\ttxStart-txEnd\t5'UTR-3'UTR\t\t\t73703736\t73820265\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tIMH\t7:66631329-143298938;7:67635774-98083201\t0.5000\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t47.98\t1.014608801418\t-0.895566510532316\t-0.401705936344982\t-0.746648021563001\t2.45305749434808\t\t\t\t\t7461\tHGNC:2586\t\t\t\t\t\t0\t9.9997e-01\t9.9988e-01\t\t\tfull=5\n7_72726579_74139390_DEL_1\t7\t72726579\t74139390\t-1412812\tDEL\tWilliams syndrom\tPathogenic\tNA\tsplit\tq11.23\tGTF2IRD1\t\t\t\tNM_001199207\t2\t73868235\t74016931\t148696\t2931\t100\tno\t27\ttxStart-txEnd\t5'UTR-3'UTR\t\t\t73868235\t74016931\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tIMH\t7:66631329-143298938;7:67635774-98083201\t0.5000\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t0\t0\t47.51\t1.77201404347458\t-0.0325005901648791\t0.491444562429841\t0.977775575032158\t2.53365459317235\tneurodevelopmental disorder\tAR\tLimited\t36308390\t9569\tHGNC:4661\t\t\t\t\t\t1\t9.0039e-01\t9.9643e-01\t\t\tfull=5\n7_72726579_74139390_DEL_1\t7\t72726579\t74139390\t-1412812\tDEL\tWilliams syndrom\tPathogenic\tNA\tsplit\tq11.23\tMIR10525\t\t\t\tNR_162116\t1\t74010294\t74010353\t59\t0\t0\tNA\t1\ttxStart-txEnd\tUTR\t\t\t74010294\t74010353\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tIMH\t7:66631329-143298938;7:67635774-98083201\t0.5000\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t113218504\tHGNC:54015\t\t\t\t\t\t\t\t\t\t\tfull=5\n7_72726579_74139390_DEL_1\t7\t72726579\t74139390\t-1412812\tDEL\tWilliams syndrom\tPathogenic\tNA\tsplit\tq11.23\tGTF2I\t\t\t\tNM_032999\t4\t74072043\t74175022\t67347\t943\t31\tyes\t35\ttxStart-intron12\t5'UTR-CDS\t3733\t3'\t74072043\t74139390\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tIMH\t7:66631329-143298938;7:67635774-98083201\t0.5000\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t0\t0\t33.5\t\t\t\t0.964550444182401\t4.23220859072885\t\t\t\t\t2969\tHGNC:4659\t\t\t\t\t\t1\t9.9592e-01\t9.9935e-01\t\t\tfull=5\n7_72726579_74139390_DEL_1\t7\t72726579\t74139390\t-1412812\tDEL\tWilliams syndrom\tPathogenic\tNA\tsplit\tq11.23\tGTF2I-AS1\t\t\t\tNR_110044\t1\t74103270\t74143256\t36120\t0\t0\tNA\t4\tintron2-txEnd\tUTR\t2349\t5'\t74103270\t74139390\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tIMH\t7:66631329-143298938;7:67635774-98083201\t0.5000\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t101926943\tHGNC:55572\t\t\t\t\t\t\t\t\t\t\tfull=5\n1_196756232_196799302_DEL_1\t1\t196756232\t196799302\t-43071\tDEL\t\tBenign\tNA\tfull\tq31.3\tCFHR3;CFHR1\tCFH\tCFHR4\t2\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tASPM (morbid/RE=EA_enhancer);CFH (morbid/RE=GH_promoter_enhancer)\t\t\t\t\t\t\tdbVar:nssv15121100\t1:196757279-196796716\t\t\t\t\t\t\tdbVar:nssv15156967;dbVar:nssv15156970;dbVar:nssv15149867;nssv15151118;dbVar:nssv15127572;dbVar:nssv18330594;dbVar:nssv15777262;dbVar:nssv15169967;dbVar:nssv15146388;dbVar:nssv15151024\t1:47852-249228449;1:82155-249218992;1:849468-249224684;1:145764500-249233096;1:181453461-213107248;1:182388774-249111240;1:185644664-221698833;1:187113114-224487119;1:195483440-249213000\t0.02;0.02;0.02;0.04;0.14;0.06;0.12;0.12;0.08\t\t\tdbVar:nssv15129680;dbVar:nssv16207750;dbVar:nssv15146573;dbVar:nssv15151287;dbVar:nssv17970297;dbVar:nssv17970308;dbVar:nssv15146667;dbVar:nssv18329566;dbVar:nssv18330283;dbVar:nssv15154062;dbVar:nssv15134156;dbVar:nssv18792867;dbVar:nssv15146075;dbVar:nssv15119768\t1:146053395-249233096;1:177551194-199599056;1:179002041-199694025;1:179011315-199022759;1:179073387-200192265;1:179413480-201764737;1:189003615-199584994;1:189633886-199854163;1:193011754-199882947;1:195089819-197443021;1:195483440-197865624;1:196676029-196842326;1:196712877-196797546;1:196722207-196808505\t0.04;0.20;0.21;0.22;0.20;0.19;0.41;0.42;0.63;1.83;1.81;25.90;48.80;49.91\t\t\tDDD:3693\t1:196724161-196912840\t0.1822\t1000g;DDD:3692;DDD:3693;DDD:3695;dbVar;dgv11e55;dgv6e203;dgv87e199;esv2421560;esv3588469;nsv514031;nsv517662\t1:196711068-196937536;1:196719268-196810043;1:196722346-196822692;1:196723048-196815791;1:196724161-196912840;1:196727851-196939719;chr1:196728877-196808865;1:196728878-196808865;1:196728878-196808865;1:196731149-196901753;1:196733402-196813850;1:196738898-196801697\t0.4486\t\t\t\tIMH\t1:17124869-234920285;1:108097960-232960701\t0.3095\t\t\t1:196748312-196757828 DDD:3701;\t1:196724161-196912840 DDD:3693;1:196792551-196801251 DDD:3714\t\t\t1:196719268-196810043 DDD:3692;1:196723048-196815791 esv2421560;1:196727851-196939719 dgv6e203;1:196728878-196808865 1000g;chr1:196729000-196789200 dbVar;1:196731149-196901753 dgv11e55;chr1:196735895-196764940 dbVar;1:196735896-196764940 esv3588471;1:196738898-196801697 nsv514031;chr1:196761000-196783900 dbVar;1:196772366-196774588 1000g;1:196772602-196794300 DDD:3705;1:196777327-196902217 DDD:3707;1:196782000-196788000 gnomAD-SV_v2.1_DEL_1_10685;1:196782356-196903873 1000g;1:196785120-196821192 DDD:3712;1:196790200-196805500 gnomAD-SV_v2.1_DEL_1_10686;\t1:196711068-196937536 nsv517662;1:196722346-196822692 dgv87e199;1:196724161-196912840 DDD:3693;chr1:196728877-196808865 dbVar;1:196728878-196808865 esv3588469;1:196729000-196789200 gnomAD-SV_v2.1_DEL_1_10680;1:196733402-196813850 DDD:3695;1:196735896-196764940 1000g;1:196738624-196771280 DDD:3698;1:196748312-196757828 DDD:3701;chr1:196772365-196774588 dbVar;1:196772366-196774588 esv3588475;1:196773003-196909196 DDD:3706;chr1:196782000-196788000 dbVar;chr1:196782355-196903873 dbVar;1:196782356-196903873 esv3588478;chr1:196790200-196805500 dbVar;1:196798566-196802072 DDD:3720\t0.350\t0.285\t\t\t1:196797933-196799242\tL1MDa\t\t\t1:196756102-196796319\t1:196796320-196825045\t\t\t\t\t\t\t\t98.26\t\t\t\t1.07662990621103\t1.30887789301822\t\t\t\t\t\t\t605336;134371\t\t\t\tyes\t8\t2.6297e-08\t9.0932e-04\t1.0\t1A (cf Gene_count, RE_gene, +0.00);2A (cf P_loss_source, +1.00);3A (2 genes, +0.00);5F (+0.00)\t5\n1_196756232_196799302_DEL_1\t1\t196756232\t196799302\t-43071\tDEL\t\tBenign\tNA\tsplit\tq31.3\tCFHR3\t\t\t\tNM_021023\t6\t196743969\t196764537\t8306\t563\t56\tyes\t6\tintron3-txEnd\tCDS-3'UTR\t1114\t3'\t196756231\t196764537\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tDDD:3693\t1:196724161-196912840\t0.1822\t1000g;DDD:3692;DDD:3693;DDD:3695;DDD:3698;dbVar;dgv11e55;dgv6e203;dgv87e199;esv2421560;esv3588469;esv3588471;gnomAD-SV_v2.1_DEL_1_10680;nsv514031;nsv517662\t1:196711068-196937536;1:196719268-196810043;1:196722346-196822692;1:196723048-196815791;1:196724161-196912840;1:196727851-196939719;chr1:196728877-196808865;1:196728878-196808865;1:196728878-196808865;chr1:196729000-196789200;1:196729000-196789200;1:196731149-196901753;1:196733402-196813850;chr1:196735895-196764940;1:196735896-196764940;1:196735896-196764940;1:196738624-196771280;1:196738898-196801697\t0.4486\t\t\t\tIMH\t1:17124869-234920285;1:108097960-232960701\t0.3095\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t98.26\t\t\t\t0.6684477327677\t0.697024247535932\themolytic uremic syndrome, atypical, susceptibility to, 1\t\tLimited\t22626820\t10878\tHGNC:16980\t605336\t(Hemolytic uremic syndrome, atypical, susceptibility to), 235400 (3) AD,AR;(Macular degeneration, age-related, reduced risk of), 603075 (3) AD\tAD;AD,AR\t\tyes\t8\t1.7200e-11\t1.2190e-05\t\t\tfull=5\n1_196756232_196799302_DEL_1\t1\t196756232\t196799302\t-43071\tDEL\t\tBenign\tNA\tsplit\tq31.3\tCFHR1\t\t\t\tNM_002113\t3\t196788860\t196801319\t10442\t607\t61\tyes\t6\ttxStart-intron4\t5'UTR-CDS\t327\t3'\t196788860\t196799302\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tDDD:3693\t1:196724161-196912840\t0.1822\t1000g;DDD:3692;DDD:3693;DDD:3695;DDD:3706;DDD:3707;DDD:3712;dbVar;dgv11e55;dgv6e203;dgv87e199;esv2421560;esv3588469;esv3588478;nsv514031;nsv517662\t1:196711068-196937536;1:196719268-196810043;1:196722346-196822692;1:196723048-196815791;1:196724161-196912840;1:196727851-196939719;chr1:196728877-196808865;1:196728878-196808865;1:196728878-196808865;1:196731149-196901753;1:196733402-196813850;1:196738898-196801697;1:196773003-196909196;1:196777327-196902217;chr1:196782355-196903873;1:196782356-196903873;1:196782356-196903873;1:196785120-196821192\t0.4486\t\t\t\tIMH\t1:17124869-234920285;1:108097960-232960701\t0.3095\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t92.58\t\t\t\t1.07662990621103\t1.30887789301822\tage related macular degeneration 1;dense deposit disease;hemolytic uremic syndrome, atypical, susceptibility to, 1\tAD;AR\tLimited;Supportive\t19745068;19861685;23728178[PMID];23830046\t3078\tHGNC:4888\t134371\t(Hemolytic uremic syndrome, atypical, susceptibility to), 235400 (3) AD,AR;(Macular degeneration, age-related, reduced risk of), 603075 (3) AD\tAD;AD,AR\t\tyes\t8\t2.6297e-08\t9.0932e-04\t\t\tfull=5\n12_63935482_64130626_DEL_1\t12\t63935482\t64130626\t-195145\tDEL\tDPY19L2 (both DEL and DUP LCR mediated, precise breakpoints)\tPathogenic\tNA\tfull\tq14.2\tDPY19L2\tAVPR1A\tRXYLT1\t1\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tRXYLT1 (morbid/RE=GH_enhancer+GH_promoter);TBK1 (morbid/RE=EA_enhancer)\t\t\t\t\tSpermatogenic failure 9, 613958 (3) AR\t\tdbVar:nssv15119764;dbVar:nssv16213932;morbid:DPY19L2\t12:63952693-64062273;12:63952694-64062354;12:63989747-63989817\t\t\t\t\t\t\tdbVar:nssv15161620;dbVar:nssv15161414;nssv15161422;dbVar:nssv15171852;dbVar:nssv15161798;dbVar:nssv15171855\t12:2-133851895;12:173788-133777902;12:191620-133777645;12:282466-133773393;12:621221-133779118\t0.15;0.15;0.15;0.15;0.15\t\t\tdbVar:nssv15136921\t12:61300933-66961857\t3.45\t1\tSpermatogenic_failure_9\t\t\t\t\t\t\t\t\t\tIMH\t12:11501488-96031049;12:40933234-113477160\t0.1070\t\t\t12:63939159-64117235 1000g;12:63940549-64135811 DDD:38888;12:64069043-64136500 dgv280e214;12:63939159-64117235 1000g;12:63940549-64135811 DDD:38888;12:64069043-64136500 dgv280e214\t12:63936386-64131550 gnomAD-SV_v2.1_DUP_12_34997;12:63939159-64117235 esv3629757;12:64020291-64020367 DDD:38896;12:63936386-64131550 gnomAD-SV_v2.1_DUP_12_34997;12:63939159-64117235 esv3629757;12:64020291-64020367 DDD:38896\t\t\tchr12:63936000-63986000 dbVar;chr12:63946269-64141505 dbVar;chr12:63946732-63946956 dbVar;12:63946733-63946956 IMH;chr12:63959839-63959910 dbVar;12:64020291-64020367 DDD:38896;chr12:64069257-64069348 dbVar;chr12:64076528-64076585 dbVar;chr12:64116494-64116881 dbVar;chr12:63923277-64119251 dbVar;chr12:63939158-64117235 dbVar;12:63946730-63946956 esv2662353;12:63946732-63946956 gnomAD-SV_v2.1_DEL_12_129265;chr12:63950172-63950241 dbVar;chr12:64015848-64018740 dbVar;chr12:64065000-64130000 dbVar;chr12:64069869-64069961 dbVar;chr12:64103835-64106468 dbVar;chr12:64122000-64127000 dbVar\tchr12:63923277-64119251 dbVar;chr12:63939158-64117235 dbVar;12:63946730-63946956 esv2662353;12:63946732-63946956 gnomAD-SV_v2.1_DEL_12_129265;chr12:63950172-63950241 dbVar;chr12:64015848-64018740 dbVar;chr12:64065000-64130000 dbVar;chr12:64069869-64069961 dbVar;chr12:64103835-64106468 dbVar;chr12:64122000-64127000 dbVar;chr12:63936000-63986000 dbVar;chr12:63946269-64141505 dbVar;chr12:63946732-63946956 dbVar;12:63946733-63946956 IMH;chr12:63959839-63959910 dbVar;12:64020291-64020367 DDD:38896;chr12:64069257-64069348 dbVar;chr12:64076528-64076585 dbVar;chr12:64116494-64116881 dbVar\t0.530\t0.430\t12:63935369-63935656\tAluSq2\t12:64130409-64130696\tAluSq2\t\t\t12:63923419-63951619\t12:64119249-64146247\t\t\t\t\t\t\t\t81.13\t\t\t\t1.02618176351368\t1.66555804568279\t\t\t\t\t\t\t613893\t\t\tyes\t\t4\t1.0936e-13\t7.0294e-05\t1.0\t1A (cf Gene_count, RE_gene, +0.00);2A (cf P_loss_source, +1.00);3A (1 gene, +0.00);5F (+0.00)\t5\n12_63935482_64130626_DEL_1\t12\t63935482\t64130626\t-195145\tDEL\tDPY19L2 (both DEL and DUP LCR mediated, precise breakpoints)\tPathogenic\tNA\tsplit\tq14.2\tDPY19L2\t\t\t\tNM_173812\t5\t63952692\t64062273\t109581\t2277\t100\tno\t22\ttxStart-txEnd\t5'UTR-3'UTR\t\t\t63952692\t64062273\t\t\t\t\t\tSpermatogenic failure 9, 613958 (3) AR\t\tdbVar:nssv16213932;morbid:DPY19L2\t12:63952693-64062273;12:63989747-63989817\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t1\tSpermatogenic_failure_9\t1000g;DDD:38888;esv3629757;gnomAD-SV_v2.1_DUP_12_34997\t12:63936386-64131550;12:63939159-64117235;12:63939159-64117235;12:63940549-64135811\t0.0257\tdbVar\tchr12:63923277-64119251;chr12:63939158-64117235;chr12:63946269-64141505\t0.01\t\t\t\tIMH\t12:11501488-96031049;12:40933234-113477160\t0.1070\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t81.13\t\t\t\t1.02618176351368\t1.66555804568279\tmale infertility due to globozoospermia;spermatogenic failure 9\tAR\tStrong;Supportive\t17008355;21397063;21397063[PMID]_22571172[PMID];21397064;22627659;22653751;25755131;25780569\t283417\tHGNC:19414\t613893\tSpermatogenic failure 9, 613958 (3) AR\tAR\tyes\t\t4\t1.0936e-13\t7.0294e-05\t\t\tfull=5\n16_1565630_1571297_DUP_1\t16\t1565630\t1571297\t5668\tDUP\tIFT140 tandem duplication\tPathogenic\tNA\tfull\tp13.3\tIFT140\tTELO2\tTMEM204\t1\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tdbVar:nssv17973053\t16:1568198-1570829\t\t\tdbVar:nssv16208781\t16:1568218-1570809\t\t\t\t\tCRANIOECTODERMAL_DYSPLASIA_5|Saldino-Mainzer_syndrome|Cranioectodermal_dysplasia|Joubert_syndrome_with_Jeune_asphyxiating_thoracic_dystrophy\t\tdbVar:nssv15158812;dbVar:nssv15148703;dbVar:nssv15147067;dbVar:nssv15148669;dbVar:nssv15147068;dbVar:nssv17649874;dbVar:nssv15152396;dbVar:nssv15150758;dbVar:nssv15149904;dbVar:nssv15154767;dbVar:nssv16254459;dbVar:nssv15149503;dbVar:nssv15150639;nssv15151292;dbVar:nssv15158813;dbVar:nssv15158224;dbVar:nssv15147425;dbVar:nssv15147959;dbVar:nssv15147069;dbVar:nssv15148094;dbVar:nssv15147790;dbVar:nssv8639650;dbVar:nssv15606077;dbVar:nssv18326373;dbVar:nssv15146792;dbVar:nssv15147071;dbVar:nssv15145754;dbVar:nssv15155466;dbVar:nssv17955877;dbVar:nssv18841986;CLN:513805\t16:61452-90294632;16:69194-90274381;16:73142-11390552;16:78802-9169448;16:79942-2610461;16:84486-5251013;16:85881-11209288;16:85881-19806921;16:85881-22442007;16:85881-3216551;16:85881-5249457;16:85881-9883129;16:85882-90155062;16:88166-90163275;16:88166-90274695;16:93733-13420663;16:96767-11619372;16:96767-3264623;16:96767-4297186;16:97134-5122974;16:102840-28327676;16:109979-4316797;16:111044-6627459;16:716663-15836961;16:1271652-2283774;16:1328823-1969149;16:1505185-4415346;16:1561202-1573469;16:1565604-1571309;16:1565629-1571298\t0.01;0.01;0.05;0.06;0.22;0.11;0.05;0.03;0.03;0.18;0.11;0.06;0.01;0.01;0.01;0.04;0.05;0.18;0.13;0.11;0.02;0.13;0.09;0.04;0.56;0.89;0.19;46.20;99.33;99.96\tCranioectodermal dysplasia 5, 621180 (3) AR;Retinitis pigmentosa 80, 617781 (3) AR;Short-rib thoracic dysplasia 9 with or without polydactyly, 266920 (3) AR;Polycystic kidney disease 9, susceptibility to, 621164 (3) AD\t\tdbVar:nssv15173022;dbVar:nssv15145815;dbVar:nssv15147164;dbVar:nssv15155465;dbVar:nssv15776300;dbVar:nssv15146945;dbVar:nssv15148829;dbVar:nssv15148018;dbVar:nssv15145816;dbVar:nssv18790909;nssv18790910;dbVar:nssv15771714;dbVar:nssv16214818;dbVar:nssv18792796;dbVar:nssv16214651;morbid:IFT140\t16:61452-1593645;16:73142-1762524;16:73142-1823350;16:85881-1875694;16:85881-2053328;16:88166-1715454;16:96723-1917328;16:96767-1594015;16:96767-2047583;16:256303-1657267;16:624056-2115656;16:624056-2148005;16:811897-2130379;16:1203719-2185710;16:1560428-1662073\t0.37;0.34;0.32;0.32;0.29;0.35;0.31;0.38;0.29;0.40;0.38;0.37;0.43;0.58;5.58\t14\tJeune_thoracic_dystrophy;Retinal_dystrophy;Retinitis_pigmentosa;Retinitis_pigmentosa_80;Saldino-Mainzer_syndrome\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t0.520\t0.500\t16:1565418-1565697;16:1565698-1565893\tAluJr;L1MEf\t16:1571134-1571365\tAluJb\t\t\t\t\t\t\t\t\t\t\t\t69.24\t-1.52736818830718\t-0.448946429663129\t-0.844654865976432\t-0.922111894578121\t-1.23259677674915\t\t\t\t\t\t\t614620\t\t\tyes\tyes\t4\t9.9140e-24\t9.1377e-18\t1.0\t1A (cf Gene_count, RE_gene, +0.00);2A (cf P_gain_source, +1.00);2I-3 (IFT140, +0.00);3A (1 gene, +0.00);5F (+0.00)\t5\n16_1565630_1571297_DUP_1\t16\t1565630\t1571297\t5668\tDUP\tIFT140 tandem duplication\tPathogenic\tNA\tsplit\tp13.3\tIFT140\t\t\t\tNM_014714\t4\t1560427\t1662073\t5668\t729\t16\tno\t31\tintron26-intron30\tCDS\t488\t3'\t1565629\t1571297\t\t\t\tdbVar:nssv17973053\t16:1568198-1570829\t\t\tdbVar:nssv16208781\t16:1568218-1570809\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t14\tJeune_thoracic_dystrophy;Retinal_dystrophy;Retinitis_pigmentosa;Retinitis_pigmentosa_80;Saldino-Mainzer_syndrome\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t30\t\t69.24\t-1.52736818830718\t-0.448946429663129\t-0.844654865976432\t-0.922111894578121\t-1.23259677674915\tIFT140-related recessive ciliopathy;Jeune syndrome;Leber congenital amaurosis;autosomal dominant polycystic kidney disease;retinitis pigmentosa;retinitis pigmentosa 80;short-rib thoracic dysplasia 9 with or without polydactyly\tAD;AR\tDefinitive;Strong;Supportive\t154653;22503633;22503633[PMID];22503633[PMID]_23418020[PMID]_24009529[PMID];23418020;24009529;26216056;26216056[PMID];26968735;30479745;31034313\t9742\tHGNC:29077\t614620\tCranioectodermal dysplasia 5, 621180 (3) AR;Retinitis pigmentosa 80, 617781 (3) AR;Short-rib thoracic dysplasia 9 with or without polydactyly, 266920 (3) AR;(Polycystic kidney disease 9, susceptibility to), 621164 (3) AD\tAD;AR\tyes\tyes\t4\t9.9140e-24\t9.1377e-18\t\t\tfull=5\n17_14100119_15442066_DUP_1\t17\t14100119\t15442066\t1341948\tDUP\tPMP22 (CMT1A)\tPathogenic\tNA\tfull\tp12\tCOX10;CDRT15;HS3ST3B1;MGC12916;CDRT7;LOC101928475;CDRT8;PMP22;MIR4731;TEKT3;CDRT4;TVP23C-CDRT4;CDRT3;TVP23C\tCOX10-DT\tFBXW10B\t14\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tABCG8 (morbid/RE=mTL_miRNA);ACBD5 (morbid/RE=mTL_miRNA);ACVRL1 (HI=3/morbid/RE=mTL_miRNA);AMH (morbid/RE=mTL_miRNA);ANKS6 (morbid/RE=mTL_miRNA);ATL3 (morbid/RE=mTL_miRNA);ATP9A (morbid/RE=mTL_miRNA);CABP4 (morbid/RE=mTL_miRNA);CACNA1C (morbid/RE=mTL_miRNA);CACNA2D1 (morbid/RE=mTL_miRNA);CAVIN1 (morbid/RE=mTL_miRNA);CD4 (morbid/RE=mTL_miRNA);CDT1 (morbid/RE=mTL_miRNA);CEP104 (morbid/RE=mTL_miRNA);CHD7 (HI=3/morbid/RE=mTL_miRNA);CHEK1 (morbid/RE=mTL_miRNA);CHST6 (morbid/RE=mTL_miRNA);CISD2 (morbid/RE=mTL_miRNA);CPT1A (morbid/RE=mTL_miRNA);CREB1 (morbid/RE=mTL_miRNA);CRIPT (morbid/RE=mTL_miRNA);CYB5A (morbid/RE=mTL_miRNA);CYCS (morbid/RE=mTL_miRNA);DNAJB13 (morbid/RE=mTL_miRNA);DNAJB4 (morbid/RE=mTL_miRNA);DNAL1 (morbid/RE=mTL_miRNA);DPP9 (morbid/RE=mTL_miRNA);EIF2B2 (morbid/RE=mTL_miRNA);ELAC2 (morbid/RE=ABC_enhancer);EMC1 (morbid/RE=mTL_miRNA);FANCA (morbid/RE=mTL_miRNA);GAN (morbid/RE=mTL_miRNA);GATAD2B (HI=3/morbid/RE=mTL_miRNA);GNB5 (morbid/RE=mTL_miRNA);GOLGA2 (morbid/RE=mTL_miRNA);GPRC5B (morbid/RE=mTL_miRNA);HCFC1 (morbid/RE=mTL_miRNA);HCN4 (morbid/RE=mTL_miRNA);HFE (morbid/RE=mTL_miRNA);IKBKG (HI=3/morbid/RE=mTL_miRNA);IRAK4 (morbid/RE=mTL_miRNA);ISCA2 (morbid/RE=mTL_miRNA);KCND3 (morbid/RE=mTL_miRNA);KCNH2 (HI=3/morbid/RE=mTL_miRNA);KDM6B (HI=3/morbid/RE=mTL_miRNA);KIAA1549 (morbid/RE=mTL_miRNA);LDHD (morbid/RE=mTL_miRNA);LIAS (morbid/RE=mTL_miRNA);LNPK (morbid/RE=mTL_miRNA);LRTOMT (morbid/RE=mTL_miRNA)...\t\t\tdbVar:nssv15123319;nssv18792872;dbVar:nssv15123460;dbVar:nssv15124534;dbVar:nssv15130870;dbVar:nssv15132574;nssv15139980;nssv16091758;dbVar:nssv15143888;dbVar:nssv15144711;dbVar:nssv15605910;dbVar:nssv15770494;dbVar:nssv15770609;dbVar:nssv15770794;dbVar:nssv16216948;dbVar:nssv17171394;dbVar:nssv17171395;dbVar:nssv17171396;dbVar:nssv17517518;dbVar:nssv17968761;dbVar:nssv17971796;dbVar:nssv18788963\t17:14104013-15422557;17:14111773-15442066;17:14139890-15406546;17:14413313-15169915;17:15036413-15036413;17:15132095-15169674;17:15133085-15164054;17:15133095-15164078;17:15133097-15165152;17:15133098-15164054;17:15133961-15169915;17:15134215-15162530;17:15134215-15164064;17:15134229-15164050;17:15134234-15164044;17:15134235-15164044;17:15142769-15164064;17:15142779-15164054;17:15162412-15406546\t?Neuropathy, inflammatory demyelinating, 139393 (3) ?AD;Charcot-Marie-Tooth disease, type 1A, 118220 (3) AD;Charcot-Marie-Tooth disease, type 1E, 118300 (3) AD;Dejerine-Sottas disease, 145900 (3) AD,AR;Neuropathy, recurrent, with pressure palsies, 162500 (3) AD;Roussy-Levy syndrome, 180800 (3) AD;Spermatogenic failure 81, 620277 (3) AR\t\tHI3:PMP22;dbVar:nssv15119700;nssv15120161;dbVar:nssv15123358;dbVar:nssv15124100;dbVar:nssv15124536;dbVar:nssv15130148;nssv15131578;dbVar:nssv15131641;dbVar:nssv15132056;dbVar:nssv15133540;dbVar:nssv15152434;dbVar:nssv15605873;dbVar:nssv15770639;dbVar:nssv16212046;dbVar:nssv16213644;dbVar:nssv17171685;dbVar:nssv17171686;dbVar:nssv17171687;dbVar:nssv17517519;dbVar:nssv17968760;dbVar:nssv17971249;dbVar:nssv17971279;dbVar:nssv17972656;dbVar:nssv17974454;dbVar:nssv17974892;dbVar:nssv18788962;morbid:PMP22;morbid:TEKT3\t17:14110044-14111913;17:14111773-15442066;17:14128551-15422557;17:14139890-15142928;17:14215740-15422582;17:14763747-15242181;17:15133085-15134407;17:15133085-15142938;17:15133085-15164054;17:15133095-15164078;17:15133097-15168643;17:15133098-15164054;17:15133961-15169915;17:15134215-15164064;17:15134234-15164044;17:15134235-15164044;17:15138536-15168643;17:15142769-15142948;17:15142779-15142938;17:15142779-15164054;17:15142930-15164044;17:15152792-15162532;17:15162392-15164044;17:15162402-15162520;17:15162402-15162523;17:15162402-15164054;17:15207129-15244914\t\t\t\t\t17p12 recurrent (HNPP/CMT1A) region (includes PMP22)\t\tdbVar:nssv15148946;dbVar:nssv15150353;dbVar:nssv15149908;nssv15152170;dbVar:nssv15159024;dbVar:nssv15160732;dbVar:nssv15159027;dbVar:nssv15121114;dbVar:nssv17976715;dbVar:nssv15133502;dbVar:nssv15605908;dbVar:nssv17955950;dbVar:nssv18330199;dbVar:nssv15127850;dbVar:nssv15155527;dbVar:nssv18330563;dbVar:nssv16215327;dbVar:nssv15152221;dbVar:nssv15155528;dbVar:nssv15152212;dbVar:nssv15151828;dbVar:nssv15138362;dbVar:nssv18330766;dbVar:nssv15152433;dbVar:nssv15141972;dbVar:nssv15137438;dbVar:nssv15138198;dbVar:nssv15151261;dbVar:nssv15152245;dbVar:nssv15139258;nssv15130449;dbVar:nssv18329572;dbVar:nssv18330190;dbVar:nssv18330250;dbVar:nssv18329615;dbVar:nssv15133504;dbVar:nssv15138548;dbVar:nssv15133503;dbVar:nssv17976450;dbVar:nssv18842067;dbVar:nssv18792739;dbVar:nssv18792799;dbVar:nssv17955866;TS3:ISCA-37436;dbVar:nssv17649964;dbVar:nssv15123339;dbVar:nssv15141042;dbVar:nssv15122626;dbVar:nssv16867389;dbVar:nssv15140957;dbVar:nssv15141757;dbVar:nssv15123522;dbVar:nssv15159072;dbVar:nssv15605912;dbVar:nssv15137903;dbVar:nssv15123444;dbVar:nssv16207305;dbVar:nssv15136705;dbVar:nssv15134920;dbVar:nssv15132415;dbVar:nssv15133505\t17:526-14667519;17:526-15027737;17:527-81041938;17:7215-81058310;17:8548-81060040;17:12345-81057996;17:10795577-17867596;17:11819315-17795978;17:14029614-15562901;17:14063252-15449627;17:14073285-15442296;17:14073564-15479923;17:14073604-15482773;17:14076431-15491532;17:14078284-15479940;17:14079631-15370444;17:14083055-15463054;17:14083055-15479940;17:14083055-15491532;17:14083055-15491533;17:14083055-15567669;17:14083056-15483608;17:14085653-15512120;17:14087934-15437330;17:14087934-15484358;17:14087934-15484858;17:14087934-15490100;17:14087934-15491532;17:14087934-15500645;17:14087935-15479940;17:14087935-15483608;17:14087935-15484358;17:14087935-15484630;17:14090301-15467184;17:14090301-15473590;17:14090301-15482240;17:14093319-15476314;17:14095257-15492591;17:14095307-15466762;17:14095307-15472344;17:14096090-15492591;17:14097916-15422952;17:14098197-15442500;17:14098278-15471179;17:14098661-15501133;17:14099743-15471179;17:14100119-15455297;17:14100119-15458649;17:14100119-15492400;17:14100119-15492444;17:14101030-15504740;17:14105875-15611546;17:14111773-15482872;17:14139858-15707850;17:14195643-15545880;17:15093601-15856310;17:15113718-18184130;17:15138003-20524013;17:15162482-20828612\t3.87;6.17;1.66;1.66;1.66;1.66;18.98;22.45;87.52;96.80;98.02;95.42;95.23;94.83;95.74;98.41;97.24;96.07;95.28;95.28;90.39;95.82;94.07;99.10;96.10;96.06;95.71;95.61;94.99;96.40;96.15;96.10;96.08;97.46;97.01;96.41;97.03;96.04;97.85;97.45;96.09;99.83;99.82;97.75;95.68;97.85;99.02;98.78;96.38;96.38;95.54;88.74;97.02;83.05;92.31;45.69;10.69;5.65;4.93\t17p12 recurrent (HNPP/CMT1A) region (includes PMP22);Mitochondrial complex IV deficiency, nuclear type 3, 619046 (3) AR\t\tmorbid:COX10;dbVar:nssv15129689;dbVar:nssv17976967;dbVar:nssv18330114;dbVar:nssv15145216;dbVar:nssv18330761;dbVar:nssv15138335;dbVar:nssv18330252;dbVar:nssv15145035;dbVar:nssv15141682;dbVar:nssv15141099;dbVar:nssv15138794;dbVar:nssv18330872;dbVar:nssv15137498;nssv15155529;dbVar:nssv15137504;dbVar:nssv18330269;dbVar:nssv18842062;dbVar:nssv15141647;HI3:ISCA-37436;dbVar:nssv18330706;dbVar:nssv15150275;dbVar:nssv15129116;dbVar:nssv15123772;dbVar:nssv15141918;dbVar:nssv15159071;nssv15605909;dbVar:nssv15123331;dbVar:nssv15605911;dbVar:nssv18786371;dbVar:nssv15605913;dbVar:nssv16255829;dbVar:nssv15136096;dbVar:nssv15136245;dbVar:nssv15126994;dbVar:nssv15134560;dbVar:nssv15137984\t17:13972821-14111994;17:14073604-15482773;17:14076990-15473312;17:14077820-15491532;17:14082226-15421861;17:14082946-15484858;17:14083055-15475087;17:14083056-15484859;17:14086859-15476561;17:14087788-15473312;17:14087788-15483608;17:14087788-15490100;17:14087789-15484858;17:14087934-15484858;17:14087934-15491532;17:14087935-15491532;17:14095257-15477547;17:14095640-15274712;17:14097916-15422952;17:14098248-15475654;17:14098661-15500645;17:14098787-15495266;17:14099743-15471179;17:14100119-15455238;17:14101030-15449627;17:14101030-15482817;17:14104013-15551814;17:14110128-15472344;17:14110452-15449097;17:14111755-15442178;17:14111773-15482872;17:14111773-15491748;17:14112032-15482773;17:14574436-15856310;17:14970117-17375771\t8.53;95.23;96.11;94.92;98.66;95.72;96.40;95.73;96.56;96.85;96.14;95.70;96.05;96.06;95.61;95.61;97.08;99.62;99.83;97.43;95.72;96.10;97.85;99.03;99.44;97.05;92.42;97.78;99.47;99.99;97.02;96.40;97.03;67.68;19.62\t60\tAutosomal_recessive_Dejerine-Sottas_syndrome;Charcot-Marie-Tooth_disease;Charcot-Marie-Tooth_disease,_type_I;Charcot-Marie-Tooth_disease,_type_IA;Charcot-Marie-Tooth_disease_type_1E;Charcot-Marie-Tooth_disease_type_2E;DEJERINE-SOTTAS_SYNDROME,_AUTOSOMAL_DOMINANT;Dejerine-Sottas_disease;Guillain-Barre_syndrome,_familial;Hereditary_liability_to_pressure_palsies;Inborn_genetic_diseases;Mitochondrial_complex_4_deficiency,_nuclear_type_3;Mitochondrial_complex_IV_deficiency,_nuclear_type_1;Roussy-Lévy_syndrome\t\t\t\tdbVar\tchr17:14093499-15486000\t0.01\t\t\t\t\t\t\t\t\t17:14191081-14198547 DDD:48802;17:14224375-14483419 esv3640026;17:14668590-15084842 esv3640046\t17:14191081-14191901 DDD:48801;17:14224375-14483419 1000g;17:14668590-15084842 1000g\t\t\tchr17:14096682-14108514 dbVar;chr17:14126839-14220873 dbVar;chr17:14155625-14155942 dbVar;chr17:14189910-14191555 dbVar;17:14189911-14191555 DDD:48799;17:14189911-14191555 esv2665541;17:14189911-14191557 1000g;17:14189912-14191555 IMH;17:14191081-14191901 DDD:48801;chr17:14220258-14221199 dbVar;17:14240918-14242023 DDD:48803;17:14240923-14242032 1000g;17:14240941-14242023 IMH;chr17:14241867-14248195 dbVar;chr17:14269249-14271950 dbVar;chr17:14277792-14278679 dbVar;chr17:14300414-14308117 dbVar;chr17:14314642-14320048 dbVar;chr17:14315900-14328444 dbVar;17:14332272-14332576 gnomAD-SV_v2.1_DEL_17_158748...\tchr17:14093499-15486000 dbVar;chr17:14105499-14108091 dbVar;chr17:14132469-14133456 dbVar;chr17:14186324-14196555 dbVar;chr17:14189910-14191557 dbVar;chr17:14189911-14191555 dbVar;17:14189911-14191555 gnomAD-SV_v2.1_DEL_17_158736;17:14189911-14191557 esv3640023;17:14190834-14191460 nsv574421;chr17:14210420-14210623 dbVar;chr17:14224374-14483419 dbVar;chr17:14240922-14242032 dbVar;17:14240923-14242032 esv3640027;chr17:14240941-14242023 dbVar;chr17:14256280-14258428 dbVar;chr17:14272755-14288592 dbVar;chr17:14284612-14628667 dbVar;chr17:14300914-14367997 dbVar;chr17:14314678-14320063 dbVar;chr17:14332272-14332576 dbVar...\t0.505\t0.420\t\t\t\t\t\t\t\t17:15422954-15470900\t\t\t\t\t\t3\t\t96.58\t-2.62354415217069\t-0.276965016632095\t-1.64032033771268\t3.6772325764896\t4.17517843763452\t\t\t\t\t\t\t602125;601097;612683\t\t\tyes\tyes\t1\t9.0958e-01\t8.3315e-01\t1.0\t1A (cf Gene_count, RE_gene, +0.00);2A (cf P_gain_source, +1.00);2H-2 (PMP22/TEKT3, +0.00);2J (COX10, +0.00);2L (TVP23C/TVP23C-CDRT4, +0.00);3A (14 genes, +0.00);4O (cf po_B_gain_AllG_source, B_gain_source, po_B_gain_SomeG_source, +0.00);5F (+0.00)\t5\n17_14100119_15442066_DUP_1\t17\t14100119\t15442066\t1341948\tDUP\tPMP22 (CMT1A)\tPathogenic\tNA\tsplit\tp12\tCOX10\t\t\t\tNM_001303\t4\t13972820\t14111994\t11876\t404\t30\tyes\t7\tintron6-txEnd\tCDS-3'UTR\t4580\t5'\t14100118\t14111994\t\t\t\t\t\t\t\tdbVar:nssv15124536\t17:14110044-14111913\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t1\tMitochondrial_complex_4_deficiency,_nuclear_type_3;Mitochondrial_complex_IV_deficiency,_nuclear_type_1\t\t\t\tdbVar\tchr17:14093499-15486000\t0.01\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t30\t\t60.22\t-2.62354415217069\t-2.20885612270982\t-2.47162789907313\t0.16322796385632\t0.511864222455301\tLeigh syndrome;cytochrome-c oxidase deficiency disease;mitochondrial complex 4 deficiency, nuclear type 3;mitochondrial disease\tAR\tDefinitive;Moderate;Strong;Supportive\t10767350;10767350[PMID]_12928484[PMID]_15455402[PMID];12928484;15455402;16103131;22622581;24100867\t1352\tHGNC:2260\t602125\tMitochondrial complex IV deficiency, nuclear type 3, 619046 (3) AR\tAR\tyes\t\t3\t8.4050e-02\t6.4657e-01\t\t\tfull=5\n17_14100119_15442066_DUP_1\t17\t14100119\t15442066\t1341948\tDUP\tPMP22 (CMT1A)\tPathogenic\tNA\tsplit\tp12\tCDRT15\t\t\t\tNM_001007530\t3\t14138989\t14140179\t1190\t567\t100\tno\t3\ttxStart-txEnd\t5'UTR-3'UTR\t\t\t14138989\t14140179\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tdbVar\tchr17:14093499-15486000;chr17:14126839-14220873\t0.01\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t96.58\t-2.62354415217069\t-2.20416703243077\t-2.47162789907313\t1.67462394349301\t1.73432863871862\t\t\t\t\t146822\tHGNC:14395\t\t\t\t\t\t9\t1.2820e-06\t7.5064e-03\t\t\tfull=5\n17_14100119_15442066_DUP_1\t17\t14100119\t15442066\t1341948\tDUP\tPMP22 (CMT1A)\tPathogenic\tNA\tsplit\tp12\tHS3ST3B1\t\t\t\tNM_006041\t3\t14204397\t14252721\t48324\t1173\t100\tno\t2\ttxStart-txEnd\t5'UTR-3'UTR\t\t\t14204397\t14252721\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tdbVar\tchr17:14093499-15486000\t0.01\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t42.95\t-2.62354415217069\t-0.276965016632095\t-1.64032033771268\t3.6772325764896\t4.17517843763452\t\t\t\t\t9953\tHGNC:5198\t\t\t\t\t\t4\t2.9349e-01\t8.5455e-02\t\t\tfull=5\n17_14100119_15442066_DUP_1\t17\t14100119\t15442066\t1341948\tDUP\tPMP22 (CMT1A)\tPathogenic\tNA\tsplit\tp12\tMGC12916\t\t\t\tNR_026880\t1\t14207056\t14209062\t2006\t0\t0\tNA\t1\ttxStart-txEnd\tUTR\t\t\t14207056\t14209062\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tdbVar\tchr17:14093499-15486000;chr17:14126839-14220873\t0.01\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tfull=5\n17_14100119_15442066_DUP_1\t17\t14100119\t15442066\t1341948\tDUP\tPMP22 (CMT1A)\tPathogenic\tNA\tsplit\tp12\tCDRT7\t\t\t\tNR_033371\t1\t14934291\t14935274\t983\t0\t0\tNA\t3\ttxStart-txEnd\tUTR\t\t\t14934291\t14935274\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t1000g;esv3640046\t17:14668590-15084842;17:14668590-15084842\t0.2720\tdbVar\tchr17:14093499-15486000;chr17:14668589-15084842;chr17:14920183-14938805;chr17:14931264-14977742\t0.01\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t94150\tHGNC:14386\t\t\t\t\t\t\t\t\t\t\tfull=5\n17_14100119_15442066_DUP_1\t17\t14100119\t15442066\t1341948\tDUP\tPMP22 (CMT1A)\tPathogenic\tNA\tsplit\tp12\tLOC101928475\t\t\t\tNR_135638\t1\t14954671\t14955593\t922\t0\t0\tNA\t1\ttxStart-txEnd\tUTR\t\t\t14954671\t14955593\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t1000g;esv3640046\t17:14668590-15084842;17:14668590-15084842\t0.2720\tdbVar\tchr17:14093499-15486000;chr17:14668589-15084842;chr17:14931264-14977742\t0.01\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tfull=5\n17_14100119_15442066_DUP_1\t17\t14100119\t15442066\t1341948\tDUP\tPMP22 (CMT1A)\tPathogenic\tNA\tsplit\tp12\tCDRT8\t\t\t\tNR_103559\t1\t15008301\t15009504\t1203\t0\t0\tNA\t2\ttxStart-txEnd\tUTR\t\t\t15008301\t15009504\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t1000g;esv3640046\t17:14668590-15084842;17:14668590-15084842\t0.2720\tdbVar\tchr17:14093499-15486000;chr17:14668589-15084842;chr17:14995672-15057656;chr17:14995771-15057475\t0.01\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t94151\tHGNC:14387\t\t\t\t\t\t\t\t\t\t\tfull=5\n17_14100119_15442066_DUP_1\t17\t14100119\t15442066\t1341948\tDUP\tPMP22 (CMT1A)\tPathogenic\tNA\tsplit\tp12\tPMP22\t\t\t\tNM_000304\t4\t15133095\t15168643\t35548\t483\t100\tno\t5\ttxStart-txEnd\t5'UTR-3'UTR\t\t\t15133095\t15168643\t\t\t\tdbVar:nssv15130870;dbVar:nssv15770494;dbVar:nssv15770609;dbVar:nssv15770794;dbVar:nssv17171395;dbVar:nssv17171396;dbVar:nssv17517518;dbVar:nssv17971796;dbVar:nssv18788963\t17:15133097-15165152;17:15133098-15164054;17:15134215-15162530;17:15134215-15164064;17:15134229-15164050;17:15134234-15164044;17:15134235-15164044;17:15142769-15164064;17:15142779-15164054\t?Neuropathy, inflammatory demyelinating, 139393 (3) ?AD;Charcot-Marie-Tooth disease, type 1A, 118220 (3) AD;Charcot-Marie-Tooth disease, type 1E, 118300 (3) AD;Dejerine-Sottas disease, 145900 (3) AD,AR;Neuropathy, recurrent, with pressure palsies, 162500 (3) AD;Roussy-Levy syndrome, 180800 (3) AD\t\tHI3:PMP22;dbVar:nssv15119700;nssv15120161;dbVar:nssv15131641;dbVar:nssv15133540;dbVar:nssv15770639;dbVar:nssv16212046;dbVar:nssv17171685;dbVar:nssv17171686;dbVar:nssv17171687;dbVar:nssv17517519;dbVar:nssv17968760;dbVar:nssv17971279;dbVar:nssv17974892;dbVar:nssv18788962;morbid:PMP22\t17:15133097-15168643;17:15133098-15164054;17:15134215-15164064;17:15134234-15164044;17:15134235-15164044;17:15138536-15168643;17:15142769-15142948;17:15142779-15142938;17:15142779-15164054;17:15142930-15164044;17:15152792-15162532;17:15162392-15164044;17:15162402-15162520;17:15162402-15162523;17:15162402-15164054\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t59\tAutosomal_recessive_Dejerine-Sottas_syndrome;Charcot-Marie-Tooth_disease;Charcot-Marie-Tooth_disease,_type_I;Charcot-Marie-Tooth_disease,_type_IA;Charcot-Marie-Tooth_disease_type_1E;Charcot-Marie-Tooth_disease_type_2E;DEJERINE-SOTTAS_SYNDROME,_AUTOSOMAL_DOMINANT;Dejerine-Sottas_disease;Guillain-Barre_syndrome,_familial;Hereditary_liability_to_pressure_palsies;Inborn_genetic_diseases;Roussy-Lévy_syndrome\t\t\t\tdbVar\tchr17:14093499-15486000\t0.01\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t3\t0\t40.48\t-2.62354415217069\t-1.55852578268999\t-2.47162789907313\t-0.424806725478425\t1.07197498670855\tCharcot-Marie-Tooth disease type 1A;Charcot-Marie-Tooth disease type 1E;Charcot-Marie-Tooth disease type 3;hereditary neuropathy with liability to pressure palsies\tAD\tDefinitive;Moderate;Strong;Supportive\t10330345;118220;12578939;162500;18698610[PMID]_12090401[PMID];20301384[PMID];23224996;24175617;601097;7931393;8355122;9143558;NULL\t5376\tHGNC:9118\t601097\t?Neuropathy, inflammatory demyelinating, 139393 (3) ?AD;Charcot-Marie-Tooth disease, type 1A, 118220 (3) AD;Charcot-Marie-Tooth disease, type 1E, 118300 (3) AD;Dejerine-Sottas disease, 145900 (3) AD,AR;Neuropathy, recurrent, with pressure palsies, 162500 (3) AD;Roussy-Levy syndrome, 180800 (3) AD\t?AD;AD;AD,AR\tyes\tyes\t1\t9.0958e-01\t8.3315e-01\t\t\tfull=5\n17_14100119_15442066_DUP_1\t17\t14100119\t15442066\t1341948\tDUP\tPMP22 (CMT1A)\tPathogenic\tNA\tsplit\tp12\tMIR4731\t\t\t\tNR_039884\t1\t15154943\t15155013\t70\t0\t0\tNA\t1\ttxStart-txEnd\tUTR\t\t\t15154943\t15155013\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tdbVar\tchr17:14093499-15486000;chr17:15070858-15163533;chr17:15112458-15159531;chr17:15150741-15155583\t0.01\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t100616125\tHGNC:41597\t\t\t\t\t\t\t\t\t\t\tfull=5\n17_14100119_15442066_DUP_1\t17\t14100119\t15442066\t1341948\tDUP\tPMP22 (CMT1A)\tPathogenic\tNA\tsplit\tp12\tTEKT3\t\t\t\tNM_031898\t3\t15207128\t15244914\t37786\t1473\t100\tno\t9\ttxStart-txEnd\t5'UTR-3'UTR\t\t\t15207128\t15244914\t\t\t\t\t\tSpermatogenic failure 81, 620277 (3) AR\t\tmorbid:TEKT3\t17:15207129-15244914\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tdbVar\tchr17:14093499-15486000\t0.01\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t59.06\t-2.62354415217069\t-1.25885348060374\t-2.47162789907313\t0.241972873531725\t-0.405588628410555\tspermatogenic failure 81\t\tLimited\t18951373;36708031\t64518\tHGNC:14293\t612683\tSpermatogenic failure 81, 620277 (3) AR\tAR\tyes\t\t7\t1.9845e-17\t3.1995e-14\t\t\tfull=5\n17_14100119_15442066_DUP_1\t17\t14100119\t15442066\t1341948\tDUP\tPMP22 (CMT1A)\tPathogenic\tNA\tsplit\tp12\tCDRT4\t\t\t\tNM_001204477\t2\t15339331\t15370935\t31604\t459\t100\tno\t4\ttxStart-txEnd\t5'UTR-3'UTR\t\t\t15339331\t15370935\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tdbVar\tchr17:14093499-15486000;chr17:15287341-15482010\t0.01\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t86.77\t-2.62354415217069\t-2.24141606178004\t-2.47162789907313\t-0.193191475026352\t0.152950560142403\t\t\t\t\t284040\tHGNC:14383\t\t\t\t\t\t9\t9.5789e-02\t2.4429e-01\t\t\tfull=5\n17_14100119_15442066_DUP_1\t17\t14100119\t15442066\t1341948\tDUP\tPMP22 (CMT1A)\tPathogenic\tNA\tsplit\tp12\tTVP23C-CDRT4\t\t\t\tNM_001204478\t2\t15339331\t15466797\t102735\t33\t6\tno\t7\tintron5-txEnd\tCDS-3'UTR\t7032\t5'\t15339331\t15442066\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tdbVar\tchr17:14093499-15486000;chr17:15287341-15482010\t0.01\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t52.33\t-2.62354415217069\t-2.53125239294469\t-2.47162789907313\t0.433099426603836\t0.962176598220999\t\t\t\t\t100533496\tHGNC:42961\t\t\t\t\t\t7\t8.7378e-07\t2.3623e-03\t\t\tfull=5\n17_14100119_15442066_DUP_1\t17\t14100119\t15442066\t1341948\tDUP\tPMP22 (CMT1A)\tPathogenic\tNA\tsplit\tp12\tCDRT3\t\t\t\tNR_146601\t1\t15373624\t15374150\t526\t0\t0\tNA\t1\ttxStart-txEnd\tUTR\t\t\t15373624\t15374150\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tdbVar\tchr17:14093499-15486000;chr17:15287341-15482010\t0.01\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t94145\tHGNC:14382\t\t\t\t\t\t\t\t\t\t\tfull=5\n17_14100119_15442066_DUP_1\t17\t14100119\t15442066\t1341948\tDUP\tPMP22 (CMT1A)\tPathogenic\tNA\tsplit\tp12\tTVP23C\t\t\t\tNM_145301\t3\t15405577\t15466797\t36489\t369\t44\tno\t6\tintron5-txEnd\tCDS-3'UTR\t7032\t5'\t15405577\t15442066\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tdbVar\tchr17:14093499-15486000;chr17:15287341-15482010\t0.01\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t49.2\t-2.62354415217069\t-2.53125239294469\t-2.47162789907313\t0.622094281610252\t0.322678575541803\t\t\t\t\t201158\tHGNC:30453\t\t\t\t\t\t7\t2.3189e-05\t1.3674e-04\t\t\tfull=5\n3_62939218_65268743_DEL_1\t3\t62939218\t65268743\t-2329526\tDEL\tVOUS in 2017, reclassified in 2020\tPathogenic\tNA\tfull\tp14.2-p14.1\tLINC00698;SYNPR;SYNPR-AS1;SNTN;CDHR18P;C3orf49;THOC7;THOC7-AS1;ATXN7;SCAANT1;PSMD6-AS2;PSMD6;PSMD6-AS1;PRICKLE2-AS1;LINC00994;PRICKLE2;PRICKLE2-AS2;PRICKLE2-AS3;PRICKLE2-DT;ADAMTS9;ADAMTS9-AS1;ADAMTS9-AS2;LINC02040\tCADPS\tMAGI1\t23\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tSLC25A26 (morbid/RE=ABC_enhancer)\t\t\t\t\tSpinocerebellar ataxia 7, 164500 (3) AD\t\tmorbid:ATXN7\t3:63953470-63989138\t\t\t\t\t\t\tdbVar:nssv15162889;dbVar:nssv15164144;dbVar:nssv15149891;nssv15151839\t3:60175-197948027;3:61496-197838262;3:61893-197851986\t1.18;1.18;1.18\t\t\tdbVar:nssv15146214;dbVar:nssv15774780;dbVar:nssv15148889;dbVar:nssv15147494;dbVar:nssv17956097;dbVar:nssv16207905;dbVar:nssv15150232;dbVar:nssv15146193;dbVar:nssv15120308\t3:54079046-66046136;3:57076137-65716956;3:57174453-90309110;3:57416266-64870197;3:59332509-70686155;3:60449668-65561638;3:60526227-63742930;3:61956522-68514983;3:64746925-78459248\t19.47;26.96;7.03;25.91;20.52;45.57;24.99;35.52;3.81\t2\tProgressive_myoclonic_epilepsy_type_5;See_cases\t\t\t\t\t\t\t\t\t\tIMH\t3:1200531-154949082;3:38627146-149162150\t0.3422\t\t\t3:63725720-63725786 gnomAD-SV_v2.1_DUP_3_8770;3:64533160-64535613 gnomAD-SV_v2.1_DUP_3_8779\t3:63224614-63225527 IMH;3:64533160-64535613 IMH\t\t\tchr3:62952324-62973934 dbVar;chr3:62959476-62994696 dbVar;chr3:62959774-62994551 dbVar;chr3:62986070-62987837 dbVar;chr3:63006837-63007330 dbVar;chr3:63072271-63072321 dbVar;chr3:63103673-63107733 dbVar;3:63104370-63107212 1000g;chr3:63128000-63139500 dbVar;3:63134848-63135305 1000g;chr3:63134856-63135309 dbVar;chr3:63134857-63135309 dbVar;3:63134857-63135309 gnomAD-SV_v2.1_DEL_3_33028;chr3:63164118-63164190 dbVar;chr3:63182335-63190512 dbVar;chr3:63184629-63185275 dbVar;chr3:63256602-63256696 dbVar;chr3:63321371-63322219 dbVar;chr3:63347273-63347343 dbVar;chr3:63382056-63382224 dbVar...\tchr3:62938181-62985344 dbVar;chr3:62959345-62994669 dbVar;chr3:62959750-62999530 dbVar;chr3:62986062-62987807 dbVar;chr3:62992485-62993266 dbVar;chr3:63059041-63059108 dbVar;chr3:63081900-63082834 dbVar;chr3:63104369-63107212 dbVar;chr3:63119026-63120115 dbVar;chr3:63134847-63135305 dbVar;3:63134848-63135305 esv3596388;3:63134857-63135309 DDD:10454;3:63134857-63135309 esv2677248;3:63134858-63135309 IMH;chr3:63166947-63171818 dbVar;chr3:63184317-63184367 dbVar;chr3:63244236-63244406 dbVar;chr3:63299578-63299744 dbVar;chr3:63343372-63344883 dbVar;chr3:63353029-63353568 dbVar...\t0.355\t0.430\t3:62939271-62939427\tMER5A1\t3:65268746-65268796;3:65268797-65269299\tLTR16B;L1MB2\t\t\t\t\t\t\t\t\t\t\t\t68.54\t0.730304227093642\t1.22944963357105\t1.15014257139245\t0.85336181383742\t2.61388539526619\t\t\t\t\t\t\t607640\t\t\tyes\t\t0\t9.9544e-01\t9.8784e-01\t1.0\t1A (cf Gene_count, RE_gene, +0.00);2A (cf P_loss_source, +1.00);3A (23 genes, +0.00);5F (+0.00)\t5\n3_62939218_65268743_DEL_1\t3\t62939218\t65268743\t-2329526\tDEL\tVOUS in 2017, reclassified in 2020\tPathogenic\tNA\tsplit\tp14.2\tLINC00698\t\t\t\tNR_027104\t1\t63088363\t63110738\t22375\t0\t0\tNA\t7\ttxStart-txEnd\tUTR\t\t\t63088363\t63110738\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tIMH\t3:1200531-154949082;3:38627146-149162150\t0.3422\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t285401\tHGNC:27720\t\t\t\t\t\t\t\t\t\t\tfull=5\n3_62939218_65268743_DEL_1\t3\t62939218\t65268743\t-2329526\tDEL\tVOUS in 2017, reclassified in 2020\tPathogenic\tNA\tsplit\tp14.2\tSYNPR\t\t\t\tNM_001130003\t2\t63263983\t63602600\t338617\t858\t100\tno\t6\ttxStart-txEnd\t5'UTR-3'UTR\t\t\t63263983\t63602600\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tIMH\t3:1200531-154949082;3:38627146-149162150\t0.3422\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t27.35\t\t\t\t-0.433167561551584\t-0.551647400212283\t\t\t\t\t132204\tHGNC:16507\t\t\t\t\t\t4\t4.1913e-03\t1.7171e-01\t\t\tfull=5\n3_62939218_65268743_DEL_1\t3\t62939218\t65268743\t-2329526\tDEL\tVOUS in 2017, reclassified in 2020\tPathogenic\tNA\tsplit\tp14.2\tSYNPR-AS1\t\t\t\tNR_046677\t1\t63409271\t63535727\t126456\t0\t0\tNA\t5\ttxStart-txEnd\tUTR\t\t\t63409271\t63535727\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tIMH\t3:1200531-154949082;3:38627146-149162150\t0.3422\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tfull=5\n3_62939218_65268743_DEL_1\t3\t62939218\t65268743\t-2329526\tDEL\tVOUS in 2017, reclassified in 2020\tPathogenic\tNA\tsplit\tp14.2\tSNTN\t\t\t\tNM_001348756\t2\t63638350\t63650888\t12538\t534\t100\tno\t5\ttxStart-txEnd\t5'UTR-3'UTR\t\t\t63638350\t63650888\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tIMH\t3:1200531-154949082;3:38627146-149162150\t0.3422\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t66.14\t0.0947592166796515\t-0.338299474644844\t-0.173049359454575\t-0.0258588646723899\t-1.1196806141136\t\t\t\t\t132203\tHGNC:33706\t\t\t\t\t\t9\t1.0257e-04\t2.7379e-03\t\t\tfull=5\n3_62939218_65268743_DEL_1\t3\t62939218\t65268743\t-2329526\tDEL\tVOUS in 2017, reclassified in 2020\tPathogenic\tNA\tsplit\tp14.1\tCDHR18P\t\t\t\tNR_171774\t1\t63727499\t63799313\t71814\t0\t0\tNA\t9\ttxStart-txEnd\tUTR\t\t\t63727499\t63799313\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tIMH\t3:1200531-154949082;3:38627146-149162150\t0.3422\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t100130345\tHGNC:53742\t\t\t\t\t\t\t\t\t\t\tfull=5\n3_62939218_65268743_DEL_1\t3\t62939218\t65268743\t-2329526\tDEL\tVOUS in 2017, reclassified in 2020\tPathogenic\tNA\tsplit\tp14.1\tC3orf49\t\t\t\tNM_001355236\t2\t63804974\t63834312\t29338\t879\t100\tno\t7\ttxStart-txEnd\t5'UTR-3'UTR\t\t\t63804974\t63834312\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tIMH\t3:1200531-154949082;3:38627146-149162150\t0.3422\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t68.54\t\t\t\t\t\t\t\t\t\t132200\tHGNC:25190\t\t\t\t\t\t7\t4.0628e-08\t\t\t\tfull=5\n3_62939218_65268743_DEL_1\t3\t62939218\t65268743\t-2329526\tDEL\tVOUS in 2017, reclassified in 2020\tPathogenic\tNA\tsplit\tp14.1\tTHOC7\t\t\t\tNM_025075\t4\t63819545\t63849481\t29936\t615\t100\tno\t8\ttxStart-txEnd\t5'UTR-3'UTR\t\t\t63819545\t63849481\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tIMH\t3:1200531-154949082;3:38627146-149162150\t0.3422\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t7.39\t0.226822637024357\t-2.4455441384945\t-1.79937886551949\t-0.696357556154856\t1.21996216564798\t\t\t\t\t80145\tHGNC:29874\t\t\t\t\t\t4\t6.0818e-03\t9.7832e-01\t\t\tfull=5\n3_62939218_65268743_DEL_1\t3\t62939218\t65268743\t-2329526\tDEL\tVOUS in 2017, reclassified in 2020\tPathogenic\tNA\tsplit\tp14.1\tTHOC7-AS1\t\t\t\tNR_104326\t1\t63846320\t63847495\t1175\t0\t0\tNA\t2\ttxStart-txEnd\tUTR\t\t\t63846320\t63847495\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tIMH\t3:1200531-154949082;3:38627146-149162150\t0.3422\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tfull=5\n3_62939218_65268743_DEL_1\t3\t62939218\t65268743\t-2329526\tDEL\tVOUS in 2017, reclassified in 2020\tPathogenic\tNA\tsplit\tp14.1\tATXN7\t\t\t\tNM_001177387\t1\t63884074\t63989138\t105064\t2838\t100\tno\t13\ttxStart-txEnd\t5'UTR-3'UTR\t\t\t63884074\t63989138\t\t\t\t\t\tSpinocerebellar ataxia 7, 164500 (3) AD\t\tmorbid:ATXN7\t3:63953470-63989138\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tIMH\t3:1200531-154949082;3:38627146-149162150\t0.3422\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t17.72\t0.730304227093642\t0.636006512326363\t0.862222958307612\t0.85336181383742\t0.386394557252369\tautosomal dominant cerebellar ataxia type II;spinocerebellar ataxia type 7\tAD\tModerate;Strong;Supportive\t20301317[PMID];9288099\t6314\tHGNC:10560\t607640\tSpinocerebellar ataxia 7, 164500 (3) AD\tAD\tyes\t\t1\t9.5950e-01\t9.2856e-01\t\t\tfull=5\n3_62939218_65268743_DEL_1\t3\t62939218\t65268743\t-2329526\tDEL\tVOUS in 2017, reclassified in 2020\tPathogenic\tNA\tsplit\tp14.1\tSCAANT1\t\t\t\tNR_148359\t2\t63897187\t63898059\t872\t0\t0\tNA\t1\ttxStart-txEnd\tUTR\t\t\t63897187\t63898059\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tIMH\t3:1200531-154949082;3:38627146-149162150\t0.3422\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t100861563\tHGNC:43718\t\t\t\t\t\t\t\t\t\t\tfull=5\n3_62939218_65268743_DEL_1\t3\t62939218\t65268743\t-2329526\tDEL\tVOUS in 2017, reclassified in 2020\tPathogenic\tNA\tsplit\tp14.1\tPSMD6-AS2\t\t\t\tNR_038286\t1\t63989697\t63997919\t8222\t0\t0\tNA\t3\ttxStart-txEnd\tUTR\t\t\t63989697\t63997919\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tIMH\t3:1200531-154949082;3:38627146-149162150\t0.3422\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t100507062\tHGNC:44125\t\t\t\t\t\t\t\t\t\t\tfull=5\n3_62939218_65268743_DEL_1\t3\t62939218\t65268743\t-2329526\tDEL\tVOUS in 2017, reclassified in 2020\tPathogenic\tNA\tsplit\tp14.1\tPSMD6\t\t\t\tNM_001271779\t2\t63996226\t64009170\t12944\t1329\t100\tno\t9\ttxStart-txEnd\t5'UTR-3'UTR\t\t\t63996226\t64009170\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tIMH\t3:1200531-154949082;3:38627146-149162150\t0.3422\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t8.63\t0.167507008532066\t0.979835184836382\t0.835574002005388\t-0.764855351937167\t1.81088903222596\t\t\t\t\t9861\tHGNC:9564\t\t\t\t\t\t0\t9.9518e-01\t9.6209e-01\t\t\tfull=5\n3_62939218_65268743_DEL_1\t3\t62939218\t65268743\t-2329526\tDEL\tVOUS in 2017, reclassified in 2020\tPathogenic\tNA\tsplit\tp14.1\tPSMD6-AS1\t\t\t\tNR_189168\t1\t63997639\t64001938\t4299\t0\t0\tNA\t2\ttxStart-txEnd\tUTR\t\t\t63997639\t64001938\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tIMH\t3:1200531-154949082;3:38627146-149162150\t0.3422\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tfull=5\n3_62939218_65268743_DEL_1\t3\t62939218\t65268743\t-2329526\tDEL\tVOUS in 2017, reclassified in 2020\tPathogenic\tNA\tsplit\tp14.1\tPRICKLE2-AS1\t\t\t\tNR_045697\t1\t64053639\t64088807\t35168\t0\t0\tNA\t3\ttxStart-txEnd\tUTR\t\t\t64053639\t64088807\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tIMH\t3:1200531-154949082;3:38627146-149162150\t0.3422\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t100652759\tHGNC:40916\t\t\t\t\t\t\t\t\t\t\tfull=5\n3_62939218_65268743_DEL_1\t3\t62939218\t65268743\t-2329526\tDEL\tVOUS in 2017, reclassified in 2020\tPathogenic\tNA\tsplit\tp14.1\tLINC00994\t\t\t\tNR_033978\t1\t64064036\t64073039\t9003\t0\t0\tNA\t4\ttxStart-txEnd\tUTR\t\t\t64064036\t64073039\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tIMH\t3:1200531-154949082;3:38627146-149162150\t0.3422\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t100287879\tHGNC:48949\t\t\t\t\t\t\t\t\t\t\tfull=5\n3_62939218_65268743_DEL_1\t3\t62939218\t65268743\t-2329526\tDEL\tVOUS in 2017, reclassified in 2020\tPathogenic\tNA\tsplit\tp14.1\tPRICKLE2\t\t\t\tNM_001370528\t1\t64077911\t64253849\t175938\t2535\t100\tno\t8\ttxStart-txEnd\t5'UTR-3'UTR\t\t\t64077911\t64253849\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t2\tProgressive_myoclonic_epilepsy_type_5;See_cases\t\t\t\t\t\t\t\t\t\tIMH\t3:1200531-154949082;3:38627146-149162150\t0.3422\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t19.72\t0.557303960601498\t1.22944963357105\t1.15014257139245\t0.337534415605819\t2.61388539526619\tcomplex neurodevelopmental disorder;neurodevelopmental disorder\tAD;AR\tLimited\t\t166336\tHGNC:20340\t\t\t\t\t\t1\t9.9544e-01\t9.8784e-01\t\t\tfull=5\n3_62939218_65268743_DEL_1\t3\t62939218\t65268743\t-2329526\tDEL\tVOUS in 2017, reclassified in 2020\tPathogenic\tNA\tsplit\tp14.1\tPRICKLE2-AS2\t\t\t\tNR_046701\t1\t64089145\t64092034\t2889\t0\t0\tNA\t4\ttxStart-txEnd\tUTR\t\t\t64089145\t64092034\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tIMH\t3:1200531-154949082;3:38627146-149162150\t0.3422\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tfull=5\n3_62939218_65268743_DEL_1\t3\t62939218\t65268743\t-2329526\tDEL\tVOUS in 2017, reclassified in 2020\tPathogenic\tNA\tsplit\tp14.1\tPRICKLE2-AS3\t\t\t\tNR_046702\t1\t64173219\t64187237\t14018\t0\t0\tNA\t4\ttxStart-txEnd\tUTR\t\t\t64173219\t64187237\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tIMH\t3:1200531-154949082;3:38627146-149162150\t0.3422\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tfull=5\n3_62939218_65268743_DEL_1\t3\t62939218\t65268743\t-2329526\tDEL\tVOUS in 2017, reclassified in 2020\tPathogenic\tNA\tsplit\tp14.1\tPRICKLE2-DT\t\t\t\tNR_183712\t1\t64430932\t64441746\t10814\t0\t0\tNA\t4\ttxStart-txEnd\tUTR\t\t\t64430932\t64441746\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tIMH\t3:1200531-154949082;3:38627146-149162150\t0.3422\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t101929316\tHGNC:52829\t\t\t\t\t\t\t\t\t\t\tfull=5\n3_62939218_65268743_DEL_1\t3\t62939218\t65268743\t-2329526\tDEL\tVOUS in 2017, reclassified in 2020\tPathogenic\tNA\tsplit\tp14.1\tADAMTS9\t\t\t\tNM_182920\t2\t64501329\t64673676\t172347\t5808\t100\tno\t40\ttxStart-txEnd\t5'UTR-3'UTR\t\t\t64501329\t64673676\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tIMH\t3:1200531-154949082;3:38627146-149162150\t0.3422\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t31.58\t-1.39811826175974\t-0.477054147176997\t-0.711187689176027\t-0.797615479905467\t0.510431064472241\tciliopathy;nephronophthisis 1\tAR\tLimited;Supportive\t30609407[PMID]\t56999\tHGNC:13202\t\t\t\t\t\t1\t1.0004e-06\t4.2266e-07\t\t\tfull=5\n3_62939218_65268743_DEL_1\t3\t62939218\t65268743\t-2329526\tDEL\tVOUS in 2017, reclassified in 2020\tPathogenic\tNA\tsplit\tp14.1\tADAMTS9-AS1\t\t\t\tNR_110150\t1\t64547021\t64575760\t28739\t0\t0\tNA\t3\ttxStart-txEnd\tUTR\t\t\t64547021\t64575760\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tIMH\t3:1200531-154949082;3:38627146-149162150\t0.3422\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t101929335\tHGNC:40625\t\t\t\t\t\t\t\t\t\t\tfull=5\n3_62939218_65268743_DEL_1\t3\t62939218\t65268743\t-2329526\tDEL\tVOUS in 2017, reclassified in 2020\tPathogenic\tNA\tsplit\tp14.1\tADAMTS9-AS2\t\t\t\tNR_038264\t1\t64670545\t64997143\t326598\t0\t0\tNA\t6\ttxStart-txEnd\tUTR\t\t\t64670545\t64997143\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tIMH\t3:1200531-154949082;3:38627146-149162150\t0.3422\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t100507098\tHGNC:42435\t\t\t\t\t\t\t\t\t\t\tfull=5\n3_62939218_65268743_DEL_1\t3\t62939218\t65268743\t-2329526\tDEL\tVOUS in 2017, reclassified in 2020\tPathogenic\tNA\tsplit\tp14.1\tLINC02040\t\t\t\tNR_183715\t1\t65160613\t65179178\t18565\t0\t0\tNA\t5\ttxStart-txEnd\tUTR\t\t\t65160613\t65179178\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tIMH\t3:1200531-154949082;3:38627146-149162150\t0.3422\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t102724763\tHGNC:52880\t\t\t\t\t\t\t\t\t\t\tfull=5\n3_97483034_97487074_DEL_1\t3\t97483034\t97487074\t-4041\tDEL\tBBS3/ARL6 promotor overlapped\tPathogenic\tNA\tfull\tq11.2\tARL6\tEPHA6\tCRYBG3\t1\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tdbVar:nssv16214088\t3:97486953-97487074\t\t\t\t\t\t\tdbVar:nssv15162889;dbVar:nssv15164144;dbVar:nssv15149891;nssv15151839;dbVar:nssv17976063;dbVar:nssv15148953;dbVar:nssv15148997\t3:60175-197948027;3:61496-197838262;3:61893-197851986;3:72488758-99614758;3:93519465-145413168;3:93538468-103607593\t0.00;0.00;0.00;0.01;0.01;0.04\tBardet-Biedl syndrome 3, 600151 (3) AR;Retinitis pigmentosa 55, 613575 (3) AR;Bardet-Biedl syndrome 1, modifier of, 209900 (3) Digenic recessive,AR\t\tdbVar:nssv15147282;dbVar:nssv15146259;dbVar:nssv18842017;dbVar:nssv16254235;dbVar:nssv17171854;morbid:ARL6;dbVar:nssv18326626;dbVar:nssv17971170\t3:93538468-116605903;3:93605516-122935530;3:93698392-124492857;3:95563097-102371126;3:97194197-97510809;3:97483602-97520073;3:97483823-97499002;3:97486953-97516893\t0.02;0.01;0.01;0.06;1.28;9.52;21.42;0.41\t5\tARL6-related_disorder;Bardet-Biedl_syndrome_1;Bardet-Biedl_syndrome_3;Retinal_dystrophy;Retinitis_pigmentosa;Retinitis_pigmentosa_55\t\t\t\tdbVar\tchr3:97481287-97495551\t0.01\t\t\t\tIMH\t3:1200531-154949082;3:38627146-149162150;3:75497389-125619977\t0.3422\t\t\t\t\t\t\t\tchr3:97481287-97495551 dbVar\t0.455\t0.335\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t10.16\t0.309918017790144\t-0.416168538751037\t-0.151628993663861\t-0.139439307213778\t-0.254839803839483\t\t\t\t\t\t\t608845\t\t\tyes\tyes\t5\t1.0130e-02\t4.2709e-03\t1.0\t1A (cf Gene_count, RE_gene, +0.00);2A (cf P_loss_source, +1.00);3A (1 gene, +0.00);5F (+0.00)\t5\n3_97483034_97487074_DEL_1\t3\t97483034\t97487074\t-4041\tDEL\tBBS3/ARL6 promotor overlapped\tPathogenic\tNA\tsplit\tq11.2\tARL6\t\t\t\tNM_032146\t5\t97483364\t97520086\t3710\t123\t21\tno\t9\ttxStart-intron3\t5'UTR-CDS\t0\t5'\t97483364\t97487074\t\t\t\t\t\t\t\tdbVar:nssv16214088\t3:97486953-97487074\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t5\tARL6-related_disorder;Bardet-Biedl_syndrome_1;Bardet-Biedl_syndrome_3;Retinal_dystrophy;Retinitis_pigmentosa;Retinitis_pigmentosa_55\t\t\t\tdbVar\tchr3:97481287-97495551\t0.01\t\t\t\tIMH\t3:1200531-154949082;3:38627146-149162150;3:75497389-125619977\t0.3422\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t30\t0\t10.16\t0.309918017790144\t-0.416168538751037\t-0.151628993663861\t-0.139439307213778\t-0.254839803839483\tBardet-Biedl syndrome;Bardet-Biedl syndrome 3;retinitis pigmentosa;retinitis pigmentosa 55\tAD;AR\tStrong;Supportive\t15258860;15314642;19858128;19956407;20142850;20301537[PMID];20301590[PMID];20333246;21282186;22085962;22334370;250666;26355662;26489029;27124789;27486776;28130426;28502102;31736247\t84100\tHGNC:13210\t608845\tBardet-Biedl syndrome 3, 600151 (3) AR;Retinitis pigmentosa 55, 613575 (3) AR;(Bardet-Biedl syndrome 1, modifier of), 209900 (3) Digenic recessive,AR\tAR;Digenic recessive,AR\tyes\tyes\t5\t1.0130e-02\t4.2709e-03\t\t\tfull=5\n5_88774329_91802402_DEL_1\t5\t88774329\t91802402\t-3028074\tDEL\tTAD MEF2C\tPathogenic\tNA\tfull\tq14.3\tLOC102724637;MIR3660;LINC01339;CETN3;LOC731157;MBLAC2;POLR3G;LYSMD3;ADGRV1;LUCAT1;ARRDC3;ARRDC3-AS1\tMEF2C-AS1\tLOC105379082\t12\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tAGO2 (morbid/RE=mTL_miRNA);B4GALNT1 (morbid/RE=mTL_miRNA);CEP57 (morbid/RE=mTL_miRNA);EPHA2 (morbid/RE=mTL_miRNA);GFPT1 (morbid/RE=mTL_miRNA);GPSM2 (morbid/RE=mTL_miRNA);KDM6A (HI=3/morbid/RE=mTL_miRNA);KMT2A (HI=3/morbid/RE=mTL_miRNA);MEF2C (HI=3/morbid/RE=ABC_enhancer+GH_enhancer+GH_promoter);MSX2 (morbid/RE=mTL_miRNA);NODAL (morbid/RE=mTL_miRNA);NR2F1 (HI=3/morbid/RE=ABC_enhancer);PIGS (morbid/RE=mTL_miRNA);PLEKHM1 (morbid/RE=mTL_miRNA);PPP1R15B (morbid/RE=mTL_miRNA);PRKACB (morbid/RE=mTL_miRNA);SELENOI (morbid/RE=mTL_miRNA)\t\t\tdbVar:nssv17172150;dbVar:nssv17172151;dbVar:nssv17974002;dbVar:nssv17974003;dbVar:nssv17976802\t5:89920928-89923613;5:89938434-89948400;5:89938454-89949769;5:90136804-90261231;5:90144435-90159694\t?Febrile seizures, familial, 4, 604352 (3) AD;Usher syndrome, type 2C, 605472 (3) Digenic dominant,AR;Usher syndrome, type 2C, GPR98;PDZD7 digenic, 605472 (3) Digenic dominant,AR;Usher_syndrome_type_2C\t\tCLN:2419348;CLN:3786833;dbVar:nssv15120153;dbVar:nssv15132320;dbVar:nssv15222969;dbVar:nssv15771046;dbVar:nssv15772847;nssv15776039;dbVar:nssv15774334;dbVar:nssv16211859;dbVar:nssv17171561;dbVar:nssv17955830;dbVar:nssv17955831;dbVar:nssv17970856;dbVar:nssv17971694;dbVar:nssv17972093;dbVar:nssv17972414;dbVar:nssv17974150;dbVar:nssv17975051;dbVar:nssv17976597;dbVar:nssv18787826;dbVar:nssv18787827;dbVar:nssv18787828;dbVar:nssv18787829;dbVar:nssv18787830;dbVar:nssv18787831;dbVar:nssv18787832;dbVar:nssv18787833;dbVar:nssv18787834;dbVar:nssv18792626;dbVar:nssv8639335;dbVar:nssv8639887;morbid:ADGRV1\t5:89414155-89415062;5:89414156-89415061;5:89523964-90412409;5:89854614-90460254;5:89854714-90459717;5:89910547-90079868;5:89910633-90002231;5:89915000-89968362;5:89918395-90059306;5:89930912-90079894;5:89940238-89999954;5:89940504-89986878;5:89940571-89940765;5:89953703-89954115;5:89953723-89954095;5:89969852-89975466;5:89988605-90077246;5:89989688-90000325;5:89990520-90136394;5:89992735-90125023;5:89999463-89999632;5:90015866-90016040;5:90046349-90049666;5:90112103-90219415;5:90119223-90151738;5:90150020-90159573;5:90151539-90151738;5:90221275-90357290;5:90261233-90678909;5:90261287-90261361;5:90368245-90398177;5:90368250-90459732\t\t\tCLN:1393621;CLN:1447486;CLN:3819107;dbVar:nssv17971430;dbVar:nssv17974885\t5:89949103-89949102;5:89949103-89949236;5:89990260-89990259;5:89990260-89990371;5:90024639-90024756\t\t\tdbVar:nssv15164761;dbVar:nssv15164765;dbVar:nssv15151111;nssv15151221;dbVar:nssv16206767;dbVar:nssv15120567;dbVar:nssv15132159;dbVar:nssv15142272;dbVar:nssv15151420;dbVar:nssv15135062;dbVar:nssv16207624;dbVar:nssv15776426\t5:13649-180905029;5:25329-180693344;5:113578-180719789;5:72790062-97478870;5:73459012-110145153;5:86420656-92718726;5:86621338-89204392;5:87399002-92675748;5:87493550-92528869;5:87792845-109221844;5:89949119-129317455\t1.67;1.68;1.68;12.26;8.25;48.08;16.65;57.39;60.14;14.13;4.71\t\t\tdbVar:nssv15151179;dbVar:nssv17970035;dbVar:nssv15138006;dbVar:nssv15127576;dbVar:nssv15120741;dbVar:nssv15122759;dbVar:nssv15143209;nssv17976344;dbVar:nssv15133640;dbVar:nssv15140345;dbVar:nssv15132311;dbVar:nssv18841850;dbVar:nssv15167313;dbVar:nssv15121450;dbVar:nssv15142367;dbVar:nssv15132971;dbVar:nssv15133836;dbVar:nssv15121948;dbVar:nssv15132637;dbVar:nssv15121951;dbVar:nssv15138054;dbVar:nssv15120743;dbVar:nssv15139660;dbVar:nssv8639414;dbVar:nssv15138098;dbVar:nssv15152898\t5:17628742-176575720;5:82185952-90110454;5:83899399-110770779;5:85045626-89302638;5:86039541-91633081;5:86062777-91444662;5:86400001-154000000;5:86487716-89253266;5:86530416-88893604;5:86672701-100860147;5:87485354-93120303;5:87512315-95096562;5:87664107-91698938;5:87764486-90147447;5:88016215-88783092;5:88062498-89028098;5:88232588-93437723;5:88348148-88783092;5:88377170-104022949;5:89670424-127412115;5:90682370-97701584;5:90707526-130655256;5:91064111-93896378;5:91327087-93283043;5:91504102-104858348\t1.91;16.86;11.27;12.41;51.11;49.62;4.48;17.32;5.05;21.34;53.74;39.93;72.48;57.62;1.14;26.28;58.17;2.01;19.35;5.65;15.96;2.74;26.07;24.30;2.23\t435\tADGRV1-related_disorder;Autosomal_recessive_sensorineural_hearing_loss;Ear_malformation;Febrile_seizures,_familial,_4;Hearing_impairment;Hearing_loss,_autosomal_recessive;Rare_genetic_deafness;Retinal_dystrophy;Usher_syndrome;Usher_syndrome_type_2;Usher_syndrome_type_2A;Usher_syndrome_type_2C\t\t\t\t\t\t\t\t\t\tIMH\t5:24758285-101693420;5:28691217-97582419;5:84488955-162334467\t0.5483\t\t\t5:89788663-89788952 IMH;5:90866987-90867072 gnomAD-SV_v2.1_DUP_5_15730\t5:89264627-89264683 gnomAD-SV_v2.1_DUP_5_15710;5:89860422-89860742 1000g\t\t\tchr5:88806361-88806411 dbVar;chr5:88831687-88837255 dbVar;chr5:89003565-89004043 dbVar;chr5:89003715-89004039 dbVar;5:89003716-89004039 esv3605750;5:89003721-89004043 esv2657768;chr5:89029798-89029893 dbVar;chr5:89045213-89045498 dbVar;chr5:89047323-89047872 dbVar;chr5:89067203-89083487 dbVar;chr5:89101197-89101273 dbVar;chr5:89113277-89114892 dbVar;chr5:89131325-89131385 dbVar;chr5:89209000-89239000 dbVar;chr5:89257321-89262348 dbVar;chr5:89359000-89373000 dbVar;chr5:89388378-89389723 dbVar;chr5:89436013-89437273 dbVar;chr5:89563059-89564683 dbVar;chr5:89578750-89579142 dbVar...\tchr5:88803653-88817310 dbVar;chr5:88824732-88824785 dbVar;chr5:88832512-88834519 dbVar;5:89003565-89004043 gnomAD-SV_v2.1_DEL_5_59965;5:89003716-89004039 1000g;5:89003721-89004043 IMH;chr5:89018000-89031000 dbVar;chr5:89039679-89039840 dbVar;chr5:89047322-89047872 dbVar;chr5:89052853-89052953 dbVar;chr5:89084915-89086582 dbVar;chr5:89112611-89115172 dbVar;chr5:89124435-89124505 dbVar;chr5:89171348-89171401 dbVar;chr5:89234368-89234446 dbVar;chr5:89299879-89302011 dbVar;chr5:89388306-89389753 dbVar;chr5:89407162-89407215 dbVar;chr5:89471562-89472013 dbVar;chr5:89574182-89585732 dbVar...\t0.335\t0.275\t\t\t5:91802185-91802338\tL2a\t\t\t\t\t\t\t\t\t\t\t\t38.97\t0.855259196084686\t1.02927857149332\t1.26063232799998\t1.13380694792028\t1.83366808117122\t\t\t\t\t\t\t602851\t\t\tyes\tyes\t1\t9.8715e-01\t9.7875e-01\t1.0\t1A (cf Gene_count, RE_gene, +0.00);2A (cf P_loss_source, +1.00);3A (12 genes, +0.00);5F (+0.00)\t5\n5_88774329_91802402_DEL_1\t5\t88774329\t91802402\t-3028074\tDEL\tTAD MEF2C\tPathogenic\tNA\tsplit\tq14.3\tLOC102724637\t\t\t\tNR_188242\t1\t89198108\t89269817\t71709\t0\t0\tNA\t6\ttxStart-txEnd\tUTR\t\t\t89198108\t89269817\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tIMH\t5:24758285-101693420;5:28691217-97582419;5:84488955-162334467\t0.5483\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tfull=5\n5_88774329_91802402_DEL_1\t5\t88774329\t91802402\t-3028074\tDEL\tTAD MEF2C\tPathogenic\tNA\tsplit\tq14.3\tMIR3660\t\t\t\tNR_037433\t1\t89312437\t89312537\t100\t0\t0\tNA\t1\ttxStart-txEnd\tUTR\t\t\t89312437\t89312537\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tIMH\t5:24758285-101693420;5:28691217-97582419;5:84488955-162334467\t0.5483\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t100500825\tHGNC:38985\t\t\t\t\t\t\t\t\t\t\tfull=5\n5_88774329_91802402_DEL_1\t5\t88774329\t91802402\t-3028074\tDEL\tTAD MEF2C\tPathogenic\tNA\tsplit\tq14.3\tLINC01339\t\t\t\tNR_120601\t1\t89454155\t89585888\t131733\t0\t0\tNA\t6\ttxStart-txEnd\tUTR\t\t\t89454155\t89585888\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tIMH\t5:24758285-101693420;5:28691217-97582419;5:84488955-162334467\t0.5483\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t101929495\tHGNC:50549\t\t\t\t\t\t\t\t\t\t\tfull=5\n5_88774329_91802402_DEL_1\t5\t88774329\t91802402\t-3028074\tDEL\tTAD MEF2C\tPathogenic\tNA\tsplit\tq14.3\tCETN3\t\t\t\tNM_001297765\t2\t89688073\t89705573\t17500\t576\t100\tno\t6\ttxStart-txEnd\t5'UTR-3'UTR\t\t\t89688073\t89705573\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tIMH\t5:24758285-101693420;5:28691217-97582419;5:84488955-162334467\t0.5483\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t5.94\t0.855259196084686\t1.02927857149332\t1.26063232799998\t-1.0886019180172\t0.322004765294048\t\t\t\t\t1070\tHGNC:1868\t\t\t\t\t\t7\t1.0528e-04\t1.1321e-02\t\t\tfull=5\n5_88774329_91802402_DEL_1\t5\t88774329\t91802402\t-3028074\tDEL\tTAD MEF2C\tPathogenic\tNA\tsplit\tq14.3\tLOC731157\t\t\t\tNR_105024\t1\t89705816\t89706486\t670\t0\t0\tNA\t2\ttxStart-txEnd\tUTR\t\t\t89705816\t89706486\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tIMH\t5:24758285-101693420;5:28691217-97582419;5:84488955-162334467\t0.5483\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tfull=5\n5_88774329_91802402_DEL_1\t5\t88774329\t91802402\t-3028074\tDEL\tTAD MEF2C\tPathogenic\tNA\tsplit\tq14.3\tMBLAC2\t\t\t\tNM_203406\t2\t89754025\t89770588\t16563\t840\t100\tno\t2\ttxStart-txEnd\t5'UTR-3'UTR\t\t\t89754025\t89770588\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tIMH\t5:24758285-101693420;5:28691217-97582419;5:84488955-162334467\t0.5483\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t38.68\t-0.0315707309390069\t0.414676882744812\t0.420940108293089\t1.13380694792028\t0.9911283716698\t\t\t\t\t153364\tHGNC:33711\t\t\t\t\t\t7\t4.5418e-05\t2.8010e-04\t\t\tfull=5\n5_88774329_91802402_DEL_1\t5\t88774329\t91802402\t-3028074\tDEL\tTAD MEF2C\tPathogenic\tNA\tsplit\tq14.3\tPOLR3G\t\t\t\tNM_001370354\t1\t89769745\t89810374\t40629\t672\t100\tno\t8\ttxStart-txEnd\t5'UTR-3'UTR\t\t\t89769745\t89810374\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tIMH\t5:24758285-101693420;5:28691217-97582419;5:84488955-162334467\t0.5483\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t38.97\t0.478729015674934\t0.798950378312061\t0.929744998199481\t0.494543657071353\t-0.512733755306802\t\t\t\t\t10622\tHGNC:30075\t\t\t\t\t\t8\t1.7611e-10\t6.4276e-05\t\t\tfull=5\n5_88774329_91802402_DEL_1\t5\t88774329\t91802402\t-3028074\tDEL\tTAD MEF2C\tPathogenic\tNA\tsplit\tq14.3\tLYSMD3\t\t\t\tNM_198273\t2\t89811442\t89825401\t13959\t921\t100\tno\t3\ttxStart-txEnd\t5'UTR-3'UTR\t\t\t89811442\t89825401\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tIMH\t5:24758285-101693420;5:28691217-97582419;5:84488955-162334467\t0.5483\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t28.58\t\t\t\t0.0616099264393714\t-0.398837217747125\t\t\t\t\t116068\tHGNC:26969\t\t\t\t\t\t3\t3.0382e-01\t7.7182e-01\t\t\tfull=5\n5_88774329_91802402_DEL_1\t5\t88774329\t91802402\t-3028074\tDEL\tTAD MEF2C\tPathogenic\tNA\tsplit\tq14.3\tADGRV1\t\t\t\tNM_032119\t4\t89854613\t90460254\t605641\t18921\t100\tno\t90\ttxStart-txEnd\t5'UTR-3'UTR\t\t\t89854613\t90460254\t\t\t\tdbVar:nssv17172150;dbVar:nssv17172151;dbVar:nssv17974002;dbVar:nssv17974003;dbVar:nssv17976802\t5:89920928-89923613;5:89938434-89948400;5:89938454-89949769;5:90136804-90261231;5:90144435-90159694\t?Febrile seizures, familial, 4, 604352 (3) AD;Usher syndrome, type 2C, 605472 (3) Digenic dominant,AR;Usher syndrome, type 2C, GPR98;PDZD7 digenic, 605472 (3) Digenic dominant,AR\t\tCLN:3786833;dbVar:nssv15120153;dbVar:nssv15222969;dbVar:nssv15771046;dbVar:nssv15772847;nssv15776039;dbVar:nssv15774334;dbVar:nssv17171561;dbVar:nssv17955830;dbVar:nssv17955831;dbVar:nssv17970856;dbVar:nssv17971694;dbVar:nssv17972093;dbVar:nssv17972414;dbVar:nssv17974150;dbVar:nssv17975051;dbVar:nssv17976597;dbVar:nssv18787826;dbVar:nssv18787827;dbVar:nssv18787828;dbVar:nssv18787829;dbVar:nssv18787830;dbVar:nssv18787831;dbVar:nssv18787832;dbVar:nssv18787833;dbVar:nssv18787834;dbVar:nssv8639335;dbVar:nssv8639887;morbid:ADGRV1\t5:89854614-90460254;5:89854714-90459717;5:89910547-90079868;5:89910633-90002231;5:89915000-89968362;5:89918395-90059306;5:89930912-90079894;5:89940238-89999954;5:89940504-89986878;5:89940571-89940765;5:89953703-89954115;5:89953723-89954095;5:89969852-89975466;5:89988605-90077246;5:89989688-90000325;5:89990520-90136394;5:89992735-90125023;5:89999463-89999632;5:90015866-90016040;5:90046349-90049666;5:90112103-90219415;5:90119223-90151738;5:90150020-90159573;5:90151539-90151738;5:90221275-90357290;5:90261287-90261361;5:90368245-90398177;5:90368250-90459732\t\t\tCLN:1393621;CLN:1447486;CLN:3819107;dbVar:nssv17971430;dbVar:nssv17974885\t5:89949103-89949102;5:89949103-89949236;5:89990260-89990259;5:89990260-89990371;5:90024639-90024756\t\t\t\t\t\t\t\t\t\t\t435\tADGRV1-related_disorder;Autosomal_recessive_sensorineural_hearing_loss;Ear_malformation;Febrile_seizures,_familial,_4;Hearing_impairment;Hearing_loss,_autosomal_recessive;Rare_genetic_deafness;Retinal_dystrophy;Usher_syndrome;Usher_syndrome_type_2;Usher_syndrome_type_2A;Usher_syndrome_type_2C\t\t\t\t\t\t\t\t\t\tIMH\t5:24758285-101693420;5:28691217-97582419;5:84488955-162334467\t0.5483\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t30\t0\t25.58\t\t\t\t\t\tUsher syndrome type 2;Usher syndrome type 2C;febrile seizures, familial, 4;nonsyndromic genetic hearing loss\tAD;AR\tDefinitive;Disputed Evidence;Limited;Strong;Supportive\t14740321;16775142;19357116;19357117;20301515[PMID];22135276;22147658;23441107;25572244;280396\t84059\tHGNC:17416\t602851\t?Febrile seizures, familial, 4, 604352 (3) AD;Usher syndrome, type 2C, 605472 (3) Digenic dominant,AR;Usher syndrome, type 2C, GPR98/PDZD7 digenic, 605472 (3) Digenic dominant,AR\tAD;Digenic dominant,AR\tyes\tyes\t\t\t\t\t\tfull=5\n5_88774329_91802402_DEL_1\t5\t88774329\t91802402\t-3028074\tDEL\tTAD MEF2C\tPathogenic\tNA\tsplit\tq14.3\tLUCAT1\t\t\t\tNR_103548\t1\t90598802\t90610219\t11417\t0\t0\tNA\t5\ttxStart-txEnd\tUTR\t\t\t90598802\t90610219\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tIMH\t5:24758285-101693420;5:28691217-97582419;5:84488955-162334467\t0.5483\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t100505994\tHGNC:48498\t\t\t\t\t\t\t\t\t\t\tfull=5\n5_88774329_91802402_DEL_1\t5\t88774329\t91802402\t-3028074\tDEL\tTAD MEF2C\tPathogenic\tNA\tsplit\tq14.3\tARRDC3\t\t\t\tNM_020801\t4\t90664447\t90679134\t14687\t1245\t100\tno\t8\ttxStart-txEnd\t5'UTR-3'UTR\t\t\t90664447\t90679134\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tIMH\t5:24758285-101693420;5:28691217-97582419;5:84488955-162334467\t0.5483\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t10.63\t0.745040589608255\t1.00834122048279\t1.19108832249232\t0.196967347879621\t1.83366808117122\t\t\t\t\t57561\tHGNC:29263\t\t\t\t\t\t1\t9.8715e-01\t9.7875e-01\t\t\tfull=5\n5_88774329_91802402_DEL_1\t5\t88774329\t91802402\t-3028074\tDEL\tTAD MEF2C\tPathogenic\tNA\tsplit\tq14.3\tARRDC3-AS1\t\t\t\tNR_027435\t1\t90676163\t90716532\t40369\t0\t0\tNA\t3\ttxStart-txEnd\tUTR\t\t\t90676163\t90716532\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tIMH\t5:24758285-101693420;5:28691217-97582419;5:84488955-162334467\t0.5483\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t100129716\tHGNC:44145\t\t\t\t\t\t\t\t\t\t\tfull=5\n6_29854871_29896710_DEL_1\t6\t29854871\t29896710\t-41840\tDEL\t\tBenign\tNA\tfull\tp22.1\tHLA-H;HCG4B\tHCP5B\tHLA-A\t2\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tGABBR1 (morbid/RE=EA_enhancer);ZFP57 (morbid/RE=EA_enhancer+GH_enhancer+GH_promoter_enhancer)\t\t\t\t\t\t\tmorbid:HLA-H\t6:29855350-29858856\t\t\t\t\t\t\tdbVar:nssv15166690;dbVar:nssv15166692;dbVar:nssv15161578;dbVar:nssv15161859;nssv15161868;dbVar:nssv15168255;dbVar:nssv15148873;dbVar:nssv15606075\t6:60108-171054786;6:108667-170980171;6:156975-46757028;6:156976-170919482;6:165633-170919470;6:3224545-30624967;6:29455466-81447367\t0.02;0.02;0.09;0.02;0.02;0.15;0.08\t\t\tdbVar:nssv17955655\t6:28005013-31683185\t1.14\t\t\tDDD:20149;IMH\t6:29698616-29950994;6:29722846-29947201;6:29723410-29948590;6:29733227-29961287;6:29760864-29916953;6:29762617-29919277;6:29767291-29923611;6:29767394-29923982;6:29771866-29927541;6:29840747-29917149\t0.1073\t1000g;DDD:20139;DDD:20142;DDD:20149;DDD:20154;IMH;dbVar;dgv1087e199;dgv7e195;esv2761013;esv2763941;esv3608493\t6:29745199-29961072;6:29805446-29928380;6:29836637-29921127;6:29837073-29937311;6:29840747-29917149;6:29842746-29916111;6:29851122-29905999;chr6:29851172-29904515;6:29851173-29904515;6:29851173-29904515;6:29851444-29899493;6:29853315-29914786\t0.4519\t\t\t\tIMH\t6:26743912-58149585;6:26745294-58149309\t0.3871\t\t\t6:29722846-29947201 IMH;6:29733227-29961287 IMH;6:29762617-29919277 IMH;6:29767394-29923982 IMH;6:29771866-29927541 IMH;6:29777143-29871794 IMH;6:29840747-29917149 DDD:20149\t6:29698616-29950994 IMH;6:29723410-29948590 IMH;6:29760864-29916953 IMH;6:29767291-29923611 IMH;6:29769716-29865367 IMH;6:29773145-29867669 IMH;6:29778441-29873573 IMH\t\t\t6:29805446-29928380 DDD:20142;6:29836637-29921127 esv2763941;6:29840747-29917149 DDD:20149;6:29851122-29905999 IMH;6:29851173-29904515 1000g;6:29851444-29865718 esv2422126;6:29853315-29914786 DDD:20154;6:29861152-29916006 IMH;6:29864510-29936194 dgv1734e212;6:29890896-29906192 dgv1089e199;6:29892561-29905834 HI40:ISCA-46607\t6:29745199-29961072 DDD:20139;6:29829109-29874629 dgv1726e212;6:29837073-29937311 esv2761013;6:29842746-29916111 dgv1087e199;chr6:29851172-29904515 dbVar;6:29851173-29904515 esv3608493;6:29851444-29899493 dgv7e195;6:29859518-29886164 dgv740n27;6:29864510-29889669 dgv1732e212;6:29873934-29890069 nsv515032;6:29891102-29906000 DDD:20157\t0.375\t0.510\t\t\t\t\t\t\t6:29842025-29863148\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tyes\t\t\t\t\t1.0\t1A (cf Gene_count, RE_gene, +0.00);2A (cf P_loss_source, +1.00);3A (2 genes, +0.00);5F (+0.00)\t5\n6_29854871_29896710_DEL_1\t6\t29854871\t29896710\t-41840\tDEL\t\tBenign\tNA\tsplit\tp22.1\tHLA-H\t\t\t\tNR_001434\t4\t29855349\t29858856\t3507\t0\t0\tNA\t8\ttxStart-txEnd\tUTR\t\t\t29855349\t29858856\t\t\t\t\t\t\t\tmorbid:HLA-H\t6:29855350-29858856\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tDDD:20149;IMH\t6:29698616-29950994;6:29722846-29947201;6:29723410-29948590;6:29733227-29961287;6:29760864-29916953;6:29762617-29919277;6:29767291-29923611;6:29767394-29923982;6:29769716-29865367;6:29771866-29927541;6:29773145-29867669;6:29777143-29871794;6:29778441-29873573;6:29840747-29917149\t0.1073\t1000g;DDD:20139;DDD:20142;DDD:20149;DDD:20154;IMH;dbVar;dgv1087e199;dgv1726e212;dgv7e195;esv2422126;esv2761013;esv2763941;esv3608493\t6:29745199-29961072;6:29805446-29928380;6:29829109-29874629;6:29836637-29921127;6:29837073-29937311;6:29840747-29917149;6:29842746-29916111;6:29851122-29905999;chr6:29851172-29904515;6:29851173-29904515;6:29851173-29904515;6:29851444-29865718;6:29851444-29899493;6:29853315-29914786\t0.4519\t\t\t\tIMH\t6:26743912-58149585;6:26745294-58149309\t0.3871\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t3136\tHGNC:4965\t\t\t\tyes\t\t\t\t\t\t\tfull=5\n6_29854871_29896710_DEL_1\t6\t29854871\t29896710\t-41840\tDEL\t\tBenign\tNA\tsplit\tp22.1\tHCG4B\t\t\t\tNR_001317\t3\t29892368\t29894992\t2624\t0\t0\tNA\t1\ttxStart-txEnd\tUTR\t\t\t29892368\t29894992\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tDDD:20149;IMH\t6:29698616-29950994;6:29722846-29947201;6:29723410-29948590;6:29733227-29961287;6:29760864-29916953;6:29762617-29919277;6:29767291-29923611;6:29767394-29923982;6:29771866-29927541;6:29840747-29917149\t0.1073\t1000g;DDD:20139;DDD:20142;DDD:20149;DDD:20154;DDD:20157;IMH;dbVar;dgv1087e199;dgv1089e199;dgv1734e212;dgv7e195;esv2761013;esv2763941;esv3608493\t6:29745199-29961072;6:29805446-29928380;6:29836637-29921127;6:29837073-29937311;6:29840747-29917149;6:29842746-29916111;6:29851122-29905999;chr6:29851172-29904515;6:29851173-29904515;6:29851173-29904515;6:29851444-29899493;6:29853315-29914786;6:29861152-29916006;6:29864510-29936194;6:29890896-29906192;6:29891102-29906000\t0.4519\t\t\t\tIMH\t6:26743912-58149585;6:26745294-58149309\t0.3871\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t80868\tHGNC:22919\t\t\t\t\t\t\t\t\t\t\tfull=5\n8_56986130_57169684_DEL_1\t8\t56986130\t57169684\t-183555\tDEL\tVOUS in 2017, reclassified in 2020\tPathogenic\tNA\tfull\tq12.1\tRPS20;SNORD54;CERNA3;MOS;PLAG1;CHCHD7\tSNORA1B\tSDR16C5\t6\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tLYN (morbid/RE=ABC_enhancer+EA_enhancer+GH_enhancer+GH_promoter_enhancer)\t\t\t\t\tAdenomas, salivary gland pleomorphic, somatic, 181030 (3);Silver-Russell syndrome 4, 618907 (3) AD;Oocyte;zygote;embryo maturation arrest 20, 620383 (3) AR\t\tmorbid:MOS;morbid:PLAG1\t8:57025501-57026541;8:57073468-57123832\t\t\t\t\t\t\tdbVar:nssv15169207;dbVar:nssv15128680;dbVar:nssv15161801;nssv15777239;nssv17976962;dbVar:nssv15161417;nssv15161657;dbVar:nssv15161846;dbVar:nssv15169210;dbVar:nssv15161105;dbVar:nssv15161269;dbVar:nssv15161748;dbVar:nssv15161087;dbVar:nssv15161426;dbVar:nssv15161357;dbVar:nssv15777249;dbVar:nssv15147495;dbVar:nssv15774700;dbVar:nssv15161758;dbVar:nssv15161797;dbVar:nssv15139743;dbVar:nssv15135704\t8:10214-146293414;8:13939-146304022;8:158049-146295771;8:158050-146295771;8:158992-146280828;8:164985-146293414;8:176453-146294098;8:191531-146274835;8:191531-146280020;8:191606-146280167;8:12491000-146295771;8:21149034-146295771;8:31936552-146295771;8:36437622-60531557;8:39555658-64049089;8:46942957-70216022;8:46942963-140297737;8:53436132-65195953;8:56228415-65864987\t0.13;0.13;0.13;0.13;0.13;0.13;0.13;0.13;0.13;0.13;0.14;0.15;0.16;0.76;0.75;0.79;0.20;1.56;1.90\t\t\tdbVar:nssv15167540;dbVar:nssv15148967;dbVar:nssv15138741;dbVar:nssv15125104;dbVar:nssv15137960;dbVar:nssv15137390;dbVar:nssv15121489;dbVar:nssv15124419\t8:49822484-58822602;8:50384338-58738029;8:54237950-62775577;8:54407102-58403572;8:55677511-57697858;8:55733918-62058861;8:56335974-59749312;8:56405321-57358911\t2.04;2.20;2.15;4.59;9.09;2.90;5.38;19.25\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t8:57048633-57098412 1000g\t\t\tchr8:56988070-56988448 dbVar;8:56988698-56989817 1000g;8:56988746-56989825 DDD:27790;chr8:56988762-56997935 dbVar;chr8:57005850-57007074 dbVar;chr8:57059737-57063078 dbVar;chr8:57160128-57168353 dbVar;chr8:57161314-57168512 dbVar\tchr8:56988017-57000275 dbVar;chr8:56988697-56989817 dbVar;chr8:56988709-56997905 dbVar;chr8:56988754-56989776 dbVar;8:56988763-56997935 1000g;chr8:57047231-57047490 dbVar;chr8:57154268-57155609 dbVar;chr8:57161113-57168156 dbVar\t0.410\t0.330\t\t\t8:57169736-57169990\tAluSz6\t\t\t\t\t\t\t\t\t\t\t\t78.38\t0.98432298330431\t0.46663829854876\t0.586548999968454\t2.2343517715388\t2.48184869967673\t\t\t\t\t\t\t190060;603026\t\t\tyes\t\t0\t9.9532e-01\t8.2992e-01\t1.0\t1A (cf Gene_count, RE_gene, +0.00);2A (cf P_loss_source, +1.00);3A (6 genes, +0.00);5F (+0.00)\t5\n8_56986130_57169684_DEL_1\t8\t56986130\t57169684\t-183555\tDEL\tVOUS in 2017, reclassified in 2020\tPathogenic\tNA\tsplit\tq12.1\tRPS20\t\t\t\tNM_001146227\t3\t56979812\t56987065\t936\t177\t41\tno\t6\ttxStart-intron3\t5'UTR-CDS\t124\t5'\t56986129\t56987065\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t0\t0\t29.1\t0.98432298330431\t-0.0464637247715686\t0.36681079114905\t-0.0133102053832282\t2.09183372030708\tDiamond-Blackfan anemia;Lynch syndrome;familial colorectal cancer;familial colorectal cancer type X;hereditary nonpolyposis colon cancer\tAD\tLimited;Moderate;Supportive\t24941021[PMID];32790018[PMID]\t6224\tHGNC:10405\t\t\t\t\t\t5\t2.0686e-02\t6.8632e-01\t\t\tfull=5\n8_56986130_57169684_DEL_1\t8\t56986130\t57169684\t-183555\tDEL\tVOUS in 2017, reclassified in 2020\tPathogenic\tNA\tsplit\tq12.1\tSNORD54\t\t\t\tNR_002437\t1\t56986397\t56986460\t63\t0\t0\tNA\t1\ttxStart-txEnd\tUTR\t\t\t56986397\t56986460\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t26795\tHGNC:10204\t\t\t\t\t\t\t\t\t\t\tfull=5\n8_56986130_57169684_DEL_1\t8\t56986130\t57169684\t-183555\tDEL\tVOUS in 2017, reclassified in 2020\tPathogenic\tNA\tsplit\tq12.1\tCERNA3\t\t\t\tNR_149110\t1\t56987150\t56987833\t683\t0\t0\tNA\t2\ttxStart-txEnd\tUTR\t\t\t56987150\t56987833\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t105375847\tHGNC:53469\t\t\t\t\t\t\t\t\t\t\tfull=5\n8_56986130_57169684_DEL_1\t8\t56986130\t57169684\t-183555\tDEL\tVOUS in 2017, reclassified in 2020\tPathogenic\tNA\tsplit\tq12.1\tMOS\t\t\t\tNM_005372\t1\t57025500\t57026541\t1041\t1041\t100\tno\t1\ttxStart-txEnd\t5'UTR-3'UTR\t\t\t57025500\t57026541\t\t\t\t\t\tOocyte;zygote;embryo maturation arrest 20, 620383 (3) AR\t\tmorbid:MOS\t8:57025501-57026541\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t78.38\t0.159444434408663\t0.46663829854876\t0.524682444320288\t2.2343517715388\t2.48184869967673\toocyte/zygote/embryo maturation arrest 20\t\tLimited\t34779126;34997960;35670744\t4342\tHGNC:7199\t190060\tOocyte/zygote/embryo maturation arrest 20, 620383 (3) AR\tAR\tyes\t\t3\t5.8928e-01\t1.4931e-01\t\t\tfull=5\n8_56986130_57169684_DEL_1\t8\t56986130\t57169684\t-183555\tDEL\tVOUS in 2017, reclassified in 2020\tPathogenic\tNA\tsplit\tq12.1\tPLAG1\t\t\t\tNM_001114634\t2\t57073467\t57123832\t50365\t1503\t100\tno\t4\ttxStart-txEnd\t5'UTR-3'UTR\t\t\t57073467\t57123832\t\t\t\t\t\tAdenomas, salivary gland pleomorphic, somatic, 181030 (3);Silver-Russell syndrome 4, 618907 (3) AD\t\tmorbid:PLAG1\t8:57073468-57123832\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t15.18\t0.393657994766781\t-2.53125239294469\t-2.47162789907313\t-0.349819812502603\t1.96019845356841\tsilver-russell syndrome 4\tAD\tModerate;Strong\t15606491;28796236;32546215\t5324\tHGNC:9045\t603026\tAdenomas, salivary gland pleomorphic, somatic, 181030 (3);Silver-Russell syndrome 4, 618907 (3) AD\tAD\tyes\t\t0\t9.9532e-01\t8.2992e-01\t\t\tfull=5\n8_56986130_57169684_DEL_1\t8\t56986130\t57169684\t-183555\tDEL\tVOUS in 2017, reclassified in 2020\tPathogenic\tNA\tsplit\tq12.1\tCHCHD7\t\t\t\tNM_001011668\t3\t57124347\t57131368\t7021\t333\t100\tno\t5\ttxStart-txEnd\t5'UTR-3'UTR\t\t\t57124347\t57131368\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t47.62\t0.447428062348521\t0.400234098889925\t0.586548999968454\t-0.725400991144389\t-0.857804306808559\t\t\t\t\t79145\tHGNC:28314\t\t\t\t\t\t6\t3.4885e-02\t3.8798e-01\t\t\tfull=5\nX_53250654_53856257_DUP_1\tX\t53250654\t53856257\t605604\tDUP\tHUWE1\tPathogenic\tNA\tfull\tp11.22\tKDM5C;IQSEC2;SMC1A;MIR6857;RIBC1;HSD17B10;HUWE1;MIR98;MIRLET7F2\tMIR6894\tPHF8\t9\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tACACA (morbid/RE=mTL_miRNA);ACADM (morbid/RE=mTL_miRNA);ACTA1 (morbid/RE=mTL_miRNA);ACVR2B (morbid/RE=mTL_miRNA);ADA (morbid/RE=mTL_miRNA);ADGRE2 (morbid/RE=mTL_miRNA);ADGRG1 (morbid/RE=mTL_miRNA);ADH5 (morbid/RE=mTL_miRNA);AGO1 (morbid/RE=mTL_miRNA);AGPS (morbid/RE=mTL_miRNA);AHR (morbid/RE=mTL_miRNA);AK2 (morbid/RE=mTL_miRNA);ALAS2 (morbid/RE=ABC_enhancer);ALDH1A3 (morbid/RE=mTL_miRNA);ALDH7A1 (morbid/RE=mTL_miRNA);ALG3 (morbid/RE=mTL_miRNA);ALG8 (morbid/RE=mTL_miRNA);AMD1 (morbid/RE=mTL_miRNA);AMMECR1 (morbid/RE=mTL_miRNA);ANKRD11 (HI=3/morbid/RE=mTL_miRNA);ANTXR2 (morbid/RE=mTL_miRNA);AP1S1 (morbid/RE=mTL_miRNA);ARCN1 (HI=3/morbid/RE=mTL_miRNA);ARHGEF18 (morbid/RE=mTL_miRNA);ARID1A (HI=3/morbid/RE=mTL_miRNA);ARID1B (HI=3/morbid/RE=mTL_miRNA);ARL6IP1 (morbid/RE=mTL_miRNA);ASCC3 (morbid/RE=mTL_miRNA);ATL1 (morbid/RE=mTL_miRNA);ATP13A3 (morbid/RE=mTL_miRNA);ATP2A2 (morbid/RE=mTL_miRNA);ATP7B (morbid/RE=mTL_miRNA);ATR (morbid/RE=mTL_miRNA);ATXN2 (morbid/RE=mTL_miRNA);B4GAT1 (morbid/RE=mTL_miRNA);BACH1 (morbid/RE=mTL_miRNA);BCL11A (HI=3/morbid/RE=mTL_miRNA);BCL2 (morbid/RE=mTL_miRNA);BCOR (HI=3/morbid/RE=mTL_miRNA);BNC2 (morbid/RE=mTL_miRNA);C12orf4 (morbid/RE=mTL_miRNA);C3 (morbid/RE=mTL_miRNA);CACNA1C (morbid/RE=mTL_miRNA);CACNB2 (morbid/RE=mTL_miRNA);CALM1 (morbid/RE=mTL_miRNA);CANT1 (morbid/RE=mTL_miRNA);CAP1 (morbid/RE=mTL_miRNA);CAPN15 (morbid/RE=mTL_miRNA);CBL (morbid/RE=mTL_miRNA);CCND2 (morbid/RE=mTL_miRNA)...\tXp11.22 region (includes HUWE1)\t\tTS3:ISCA-46299;dbVar:nssv15147941;dbVar:nssv15147942;dbVar:nssv15161312;nssv15161529;dbVar:nssv15161768\tX:53276031-53298472;X:53283514-53325284;X:53363457-53793054;X:53559549-53622547;X:53559733-53790650\tCornelia de Lange syndrome 2, 300590 (3) XLD;Developmental and epileptic encephalopathy 85, with or without midline brain defects, 301044 (3) XLD;HSD10 mitochondrial disease, 300438 (3) XLD;Intellectual developmental disorder, XL 1, 309530 (3) XLD;Intellectual developmental disorder, XL syndromic, Turner type, 309590 (3) XL;Intellectual_disability,_X-linked_1\t\tCLN:1065452;HI3:IQSEC2;HI3:SMC1A;dbVar:nssv15769470;dbVar:nssv16212358;dbVar:nssv16215156;dbVar:nssv17171530;dbVar:nssv17171900;dbVar:nssv17172048;dbVar:nssv17172462;dbVar:nssv17970926;dbVar:nssv17971164;dbVar:nssv18788536;dbVar:nssv18791522;morbid:HSD17B10;morbid:HUWE1;morbid:IQSEC2;morbid:SMC1A\tX:53253923-53254071;X:53262059-53350548;X:53263402-53280376;X:53264077-53264258;X:53264078-53264257;X:53270947-53271111;X:53279442-53280376;X:53295510-53310766;X:53348888-53349736;X:53401070-53449677;X:53401071-53449677;X:53430479-53432101;X:53430479-53442138;X:53435974-53442138;X:53448826-53449569;X:53449432-53449549;X:53458209-53461317;X:53559057-53713664\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t277\tAbnormal_heart_valve_morphology;Atypical_Rett_syndrome;Congenital_muscular_hypertrophy-cerebral_syndrome;Cornelia_de_Lange_syndrome_1;De_Lange_syndrome;Developmental_and_epileptic_encephalopathy,_85,_with_or_without_midline_brain_defects;Epileptic_encephalopathy;Global_developmental_delay;HSD10_mitochondrial_disease;HUWE1-related_disorder;Hirsutism;Hypertonia;Inborn_genetic_diseases;Intellectual_disability;Intellectual_disability,_X-linked_1;Intellectual_disability,_X-linked_syndromic,_Turner_type;Microcephaly;Neurodevelopmental_delay;Paraplegia-intellectual_disability-hyperkeratosis_syndrome;Progressive_sensorineural_hearing_impairment;SMC1A-related_cohesinopathy;SMC1A-related_disorder;See_cases;Seizure;Severe_intellectual_deficiency;Spastic_paraplegia;Syndromic_X-linked_intellectual_disability_Claes-Jensen_type;Undetermined_early-onset_epileptic_encephalopathy\t\t\t\t\t\t\t\t\t\tIMH\tX:46769178-84009828\t0.1280\t\t\t\t\t\t\tchrX:53318184-53318333 dbVar;chrX:53319071-53320350 dbVar;chrX:53414007-53419436 dbVar;chrX:53475340-53498420 dbVar;X:53478094-53491686 1000g;X:53478191-53491588 IMH;X:53478192-53491585 gnomAD-SV_v2.1_DEL_X_186301;chrX:53481193-53482847 dbVar;chrX:53485000-53555000 dbVar;X:53496417-53499888 1000g;chrX:53504537-53504627 dbVar;chrX:53513549-53520809 dbVar;chrX:53520678-53520750 dbVar;chrX:53561861-53562148 dbVar;chrX:53684764-53684885 dbVar;X:53772345-53778301 1000g;X:53772358-53778316 IMH;chrX:53776500-53781600 dbVar;chrX:53781934-53808203 dbVar;X:53792164-53792218 1000g...\tchrX:53256067-53256435 dbVar;chrX:53318309-53320696 dbVar;X:53319072-53320350 1000g;chrX:53437409-53437467 dbVar;chrX:53478093-53491686 dbVar;X:53478160-53491616 DDD:57601;chrX:53478192-53491585 dbVar;chrX:53478817-53479165 dbVar;X:53481194-53482847 1000g;chrX:53496416-53499888 dbVar;chrX:53496418-53499890 dbVar;chrX:53513441-53520776 dbVar;chrX:53513576-53513640 dbVar;chrX:53557344-53558918 dbVar;chrX:53680158-53680957 dbVar;chrX:53772344-53778301 dbVar;X:53772358-53778316 DDD:57606;chrX:53774645-53775785 dbVar;X:53776864-53777371 nsv515204;chrX:53787125-53795624 dbVar...\t0.420\t0.295\tX:53250479-53250649\tMIRc\tX:53855851-53856180;X:53856303-53856465\tL1MA7;L1MA7\t\t\t\t\t\t\t\t\t\t3\t\t75.6\t\t\t\t0.807946261414963\t9.03470791370173\t\t\t\t\t\t\t314690;300522;300040;300256;300697\t\t\tyes\t\t0\t1.0000e+00\t1.0000e+00\t1.0\t1A (cf Gene_count, RE_gene, +0.00);2A (cf P_gain_source, +1.00);2H-2 (HSD17B10/HUWE1/IQSEC2/SMC1A, +0.00);2J (KDM5C, +0.00);3A (9 genes, +0.00);5F (+0.00)\t5\nX_53250654_53856257_DUP_1\tX\t53250654\t53856257\t605604\tDUP\tHUWE1\tPathogenic\tNA\tsplit\tp11.22\tKDM5C\t\t\t\tNM_001353979\t2\t53205458\t53254389\t3736\t150\t3\tno\t26\ttxStart-intron1\t5'UTR-CDS\t555\t3'\t53250653\t53254389\t\t\t\t\t\t\t\tdbVar:nssv16215156\tX:53253923-53254071\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t6\tInborn_genetic_diseases;Spastic_paraplegia;Syndromic_X-linked_intellectual_disability_Claes-Jensen_type\t\t\t\t\t\t\t\t\t\tIMH\tX:46769178-84009828\t0.1280\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t3\t0\t11.71\t\t\t\t-1.20041549946446\t5.44441583895939\tX-linked syndromic intellectual disability;syndromic X-linked intellectual disability Claes-Jensen type\tXL\tDefinitive;Strong;Supportive\t15586325;15586325[PMID];18697827;21575681;22326837;25666439;32279304\t8242\tHGNC:11114\t314690\tIntellectual developmental disorder, XL syndromic, Claes-Jensen type, 300534 (3) XLR\tXLR\tyes\t\t0\t1.0000e+00\t9.9784e-01\t\t\tfull=5\nX_53250654_53856257_DUP_1\tX\t53250654\t53856257\t605604\tDUP\tHUWE1\tPathogenic\tNA\tsplit\tp11.22\tIQSEC2\t\t\t\tNM_001111125\t3\t53262057\t53350548\t88491\t4467\t100\tno\t15\ttxStart-txEnd\t5'UTR-3'UTR\t\t\t53262057\t53350548\t\t\t\tdbVar:nssv15147941;dbVar:nssv15147942\tX:53276031-53298472;X:53283514-53325284\tIntellectual developmental disorder, XL 1, 309530 (3) XLD;Intellectual_disability,_X-linked_1\t\tCLN:1065452;HI3:IQSEC2;dbVar:nssv17171900;dbVar:nssv17172048;dbVar:nssv17172462;dbVar:nssv17970926;dbVar:nssv18791522;morbid:IQSEC2\tX:53262059-53350548;X:53263402-53280376;X:53264077-53264258;X:53264078-53264257;X:53270947-53271111;X:53279442-53280376;X:53295510-53310766;X:53348888-53349736\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t136\tInborn_genetic_diseases;Intellectual_disability;Intellectual_disability,_X-linked_1;Neurodevelopmental_delay;Paraplegia-intellectual_disability-hyperkeratosis_syndrome;See_cases;Severe_intellectual_deficiency;Undetermined_early-onset_epileptic_encephalopathy\t\t\t\t\t\t\t\t\t\tIMH\tX:46769178-84009828\t0.1280\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t3\t0\t26.16\t\t\t\t-0.257046228208263\t4.55717824142058\tX-linked complex neurodevelopmental disorder;intellectual disability, X-linked 1;non-syndromic X-linked intellectual disability;severe intellectual disability-progressive postnatal microcephaly- midline stereotypic hand movements syndrome\tXL\tDefinitive;Strong;Supportive\t20473311[PMID];21686261;23674175[PMID];24306141;25167861;26544041;26793055;27665735;300522;30206421\t23096\tHGNC:29059\t300522\tIntellectual developmental disorder, XL 1, 309530 (3) XLD\tXLD\tyes\t\t0\t9.9998e-01\t9.7539e-01\t\t\tfull=5\nX_53250654_53856257_DUP_1\tX\t53250654\t53856257\t605604\tDUP\tHUWE1\tPathogenic\tNA\tsplit\tp11.22\tSMC1A\t\t\t\tNM_006306\t4\t53401069\t53449603\t48534\t3702\t100\tno\t25\ttxStart-txEnd\t5'UTR-3'UTR\t\t\t53401069\t53449603\t\t\t\t\t\t\t\tdbVar:nssv15769470;dbVar:nssv16212358;dbVar:nssv17171530;dbVar:nssv17971164;dbVar:nssv18788536\tX:53430479-53432101;X:53430479-53442138;X:53435974-53442138;X:53448826-53449569;X:53449432-53449549\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t118\tAbnormal_heart_valve_morphology;Atypical_Rett_syndrome;Congenital_muscular_hypertrophy-cerebral_syndrome;Cornelia_de_Lange_syndrome_1;De_Lange_syndrome;Developmental_and_epileptic_encephalopathy,_85,_with_or_without_midline_brain_defects;Epileptic_encephalopathy;Global_developmental_delay;Hirsutism;Hypertonia;Inborn_genetic_diseases;Intellectual_disability;Microcephaly;Progressive_sensorineural_hearing_impairment;SMC1A-related_cohesinopathy;SMC1A-related_disorder;See_cases;Seizure\t\t\t\t\t\t\t\t\t\tIMH\tX:46769178-84009828\t0.1280\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t3\t0\t14.23\t\t\t\t-0.112682658348456\t6.67845368195785\tCornelia de Lange syndrome;Cornelia de Lange syndrome 2;X-linked complex neurodevelopmental disorder;atypical Rett syndrome;developmental and epileptic encephalopathy, 85, with or without midline brain defects\tAD;XL\tDefinitive;Strong;Supportive\t20301283[PMID];26358754;26386245;27334371;28166369;28548707;31334757;32222533[PMID]\t8243\tHGNC:11111\t300040\tCornelia de Lange syndrome 2, 300590 (3) XLD;Developmental and epileptic encephalopathy 85, with or without midline brain defects, 301044 (3) XLD\tXLD\tyes\t\t0\t1.0000e+00\t9.9999e-01\t\t\tfull=5\nX_53250654_53856257_DUP_1\tX\t53250654\t53856257\t605604\tDUP\tHUWE1\tPathogenic\tNA\tsplit\tp11.22\tMIR6857\t\t\t\tNR_106916\t1\t53432604\t53432697\t93\t0\t0\tNA\t1\ttxStart-txEnd\tUTR\t\t\t53432604\t53432697\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tIMH\tX:46769178-84009828\t0.1280\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t102465516\tHGNC:50263\t\t\t\t\t\t\t\t\t\t\tfull=5\nX_53250654_53856257_DUP_1\tX\t53250654\t53856257\t605604\tDUP\tHUWE1\tPathogenic\tNA\tsplit\tp11.22\tRIBC1\t\t\t\tNM_001031745\t5\t53449821\t53458063\t8242\t1140\t100\tno\t8\ttxStart-txEnd\t5'UTR-3'UTR\t\t\t53449821\t53458063\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tIMH\tX:46769178-84009828\t0.1280\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t75.6\t\t\t\t0.80408198011521\t0.293719819544616\t\t\t\t\t158787\tHGNC:26537\t\t\t\t\t\t1\t9.8300e-01\t9.6626e-01\t\t\tfull=5\nX_53250654_53856257_DUP_1\tX\t53250654\t53856257\t605604\tDUP\tHUWE1\tPathogenic\tNA\tsplit\tp11.22\tHSD17B10\t\t\t\tNM_004493\t3\t53458208\t53461317\t3109\t786\t100\tno\t6\ttxStart-txEnd\t5'UTR-3'UTR\t\t\t53458208\t53461317\t\t\t\t\t\tHSD10 mitochondrial disease, 300438 (3) XLD\t\tmorbid:HSD17B10\tX:53458209-53461317\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t4\tHSD10_mitochondrial_disease\t\t\t\t\t\t\t\t\t\tIMH\tX:46769178-84009828\t0.1280\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t0\t0\t21.63\t\t\t\t0.807946261414963\t2.17074250392365\tHSD10 disease, infantile type;HSD10 disease, neonatal type;HSD10 mitochondrial disease;syndromic X-linked intellectual disability type 10\tXL\tDefinitive;Strong;Supportive\t22127393;22127393[PMID]\t3028\tHGNC:4800\t300256\tHSD10 mitochondrial disease, 300438 (3) XLD\tXLD\tyes\t\t1\t9.3604e-01\t8.8687e-01\t\t\tfull=5\nX_53250654_53856257_DUP_1\tX\t53250654\t53856257\t605604\tDUP\tHUWE1\tPathogenic\tNA\tsplit\tp11.22\tHUWE1\t\t\t\tNM_031407\t7\t53559056\t53713664\t154608\t13125\t100\tno\t84\ttxStart-txEnd\t5'UTR-3'UTR\t\t\t53559056\t53713664\t\t\t\tdbVar:nssv15161768\tX:53559549-53622547\tIntellectual developmental disorder, XL syndromic, Turner type, 309590 (3) XL\t\tmorbid:HUWE1\tX:53559057-53713664\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t13\tGlobal_developmental_delay;HUWE1-related_disorder;Inborn_genetic_diseases;Intellectual_disability;Intellectual_disability,_X-linked_syndromic,_Turner_type;Neurodevelopmental_delay\t\t\t\t\t\t\t\t\t\tIMH\tX:46769178-84009828\t0.1280\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t0\t0\t10.58\t\t\t\t-1.65771922174252\t9.03470791370173\tintellectual disability, X-linked syndromic, Turner type;non-syndromic X-linked intellectual disability;syndromic intellectual disability\tAD;XL\tDefinitive;Strong;Supportive\t18252223;19377476;1968668;20231446;22840365;24303071;25644381;25985138;27418510;27615324;29180823;29180823[PMID]\t10075\tHGNC:30892\t300697\tIntellectual developmental disorder, XL syndromic, Turner type, 309590 (3) XL\tXL\tyes\t\t0\t1.0000e+00\t1.0000e+00\t\t\tfull=5\nX_53250654_53856257_DUP_1\tX\t53250654\t53856257\t605604\tDUP\tHUWE1\tPathogenic\tNA\tsplit\tp11.22\tMIR98\t\t\t\tNR_029513\t1\t53583183\t53583302\t119\t0\t0\tNA\t1\ttxStart-txEnd\tUTR\t\t\t53583183\t53583302\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tIMH\tX:46769178-84009828\t0.1280\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t407054\tHGNC:31649\t\t\t\t\t\t\t\t\t\t\tfull=5\nX_53250654_53856257_DUP_1\tX\t53250654\t53856257\t605604\tDUP\tHUWE1\tPathogenic\tNA\tsplit\tp11.22\tMIRLET7F2\t\t\t\tNR_029484\t1\t53584152\t53584235\t83\t0\t0\tNA\t1\ttxStart-txEnd\tUTR\t\t\t53584152\t53584235\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tIMH\tX:46769178-84009828\t0.1280\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t406889\tHGNC:31484\t\t\t\t\t\t\t\t\t\t\tfull=5\n11_66287089_66288847_DEL_1\t11\t66287089\t66288847\t-1759\tDEL\tBBS1 internal frameshift\tPathogenic\tNA\tfull\tq13.2\tBBS1;ZDHHC24\tDPP3\tACTN3\t2\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tBANF1 (morbid/RE=EA_enhancer);CATSPER1 (morbid/RE=EA_enhancer);CTSF (morbid/RE=EA_enhancer);FIBP (morbid/RE=EA_enhancer);KLC2 (morbid/RE=EA_enhancer);PACS1 (morbid/RE=EA_enhancer);PC (morbid/RE=EA_enhancer);SF3B2 (morbid/RE=EA_enhancer);SPTBN2 (morbid/RE=EA_enhancer);TMEM151A (morbid/RE=EA_enhancer)\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tdbVar:nssv15171978;dbVar:nssv15158476;dbVar:nssv15150306;nssv15150623;dbVar:nssv17976763;dbVar:nssv15150659;dbVar:nssv15605814;dbVar:nssv15146474;dbVar:nssv17973682\t11:70865-134938470;11:198511-134934063;11:230617-134938470;11:32799482-134938470;11:64501920-67129258;11:65138977-67574402;11:65960974-67658241;11:66281868-66288857\t0.00;0.00;0.00;0.00;0.07;0.07;0.10;25.16\tBardet-Biedl syndrome 1, 209900 (3) Digenic recessive,AR\t\tdbVar:nssv16867095;dbVar:nssv15148225;dbVar:nssv15129970;dbVar:nssv18792809;morbid:BBS1;dbVar:nssv16214536;dbVar:nssv17171795;dbVar:nssv16212285;dbVar:nssv17976607;dbVar:nssv17974991;dbVar:nssv17172605;dbVar:nssv16212781;dbVar:nssv18787680;dbVar:nssv15128612;dbVar:nssv17172606\t11:11835570-118373112;11:65508903-67473140;11:66274841-66292574;11:66274871-66292647;11:66278106-66301069;11:66278112-66291373;11:66278112-66299528;11:66278122-66291682;11:66278712-66293593;11:66283002-66287229;11:66283155-66287229;11:66287079-66288857;11:66287079-66291105;11:66288384-66293649;11:66288722-66293683\t0.00;0.09;9.92;9.89;7.66;13.26;8.21;12.97;11.82;3.33;3.46;98.88;43.68;8.81;2.54\t14\tBBS1-related_disorder;Bardet-Biedl_syndrome;Bardet-Biedl_syndrome_1;Retinal_dystrophy\t\t\t\t\t\t\t\t\t\tIMH\t11:1642920-71249653;11:49233128-89368291;11:49425032-89029881;11:49425381-89029675;11:49580506-88798755;11:49652145-88728247;11:50025478-108975588\t0.4320\t\t\t\t\t\t\t\t\t0.565\t0.545\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t67.28\t-0.648300458519823\t0.663432885116562\t0.155145712015149\t0.635599914039232\t1.04727080312339\t\t\t\t\t\t\t209901\t\t\tyes\t\t5\t4.2080e-04\t6.1403e-03\t0.9\t1A (cf Gene_count, RE_gene, +0.00);2E-1 (BBS1, +0.90);3A (2 genes, +0.00);5F (+0.00)\t4\n11_66287089_66288847_DEL_1\t11\t66287089\t66288847\t-1759\tDEL\tBBS1 internal frameshift\tPathogenic\tNA\tsplit\tq13.2\tBBS1\t\t\t\tNM_024649\t5\t66278105\t66301069\t1759\t238\t13\tyes\t17\texon8-intron9\tCDS\t0\t5'\t66287088\t66288847\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t14\tBBS1-related_disorder;Bardet-Biedl_syndrome;Bardet-Biedl_syndrome_1;Retinal_dystrophy\t\t\t\t\t\t\t\t\t\tIMH\t11:1642920-71249653;11:49233128-89368291;11:49425032-89029881;11:49425381-89029675;11:49580506-88798755;11:49652145-88728247;11:50025478-108975588\t0.4320\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t40.7\t-0.648300458519823\t0.663432885116562\t0.155145712015149\t0.0819191978639822\t0.0377121632347663\tBardet-Biedl syndrome;Bardet-Biedl syndrome 1;ciliopathy\tAR\tDefinitive;Strong;Supportive\t10577921;10577922;12118255;18032602;20301537[PMID];20498079\t582\tHGNC:966\t209901\tBardet-Biedl syndrome 1, 209900 (3) Digenic recessive,AR\tDigenic recessive,AR\tyes\t\t5\t3.4063e-12\t1.7787e-07\t\t\tfull=4\n11_66287089_66288847_DEL_1\t11\t66287089\t66288847\t-1759\tDEL\tBBS1 internal frameshift\tPathogenic\tNA\tsplit\tq13.2\tZDHHC24\t\t\t\tNM_001348571\t2\t66288095\t66313519\t752\t0\t0\tNA\t5\texon5-txEnd\t3'UTR\t90\t3'\t66288095\t66288847\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t7\tBBS1-related_disorder;Bardet-Biedl_syndrome;Bardet-Biedl_syndrome_1;Retinal_dystrophy\t\t\t\t\t\t\t\t\t\tIMH\t11:1642920-71249653;11:49233128-89368291;11:49425032-89029881;11:49425381-89029675;11:49580506-88798755;11:49652145-88728247;11:50025478-108975588\t0.4320\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t67.28\t-1.23986898178133\t0.616417349113344\t-0.188374414893838\t0.635599914039232\t1.04727080312339\t\t\t\t\t254359\tHGNC:27387\t\t\t\t\t\t7\t4.2080e-04\t6.1403e-03\t\t\tfull=4\n7_33397468_33397607_DEL_1\t7\t33397468\t33397607\t-140\tDEL\tBBS9 inframe\tPathogenic\tNA\tfull\tp14.3\tBBS9\tRP9\tFLJ20712\t1\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tdbVar:nssv15777247;dbVar:nssv15168013;dbVar:nssv15161666;nssv15161679;dbVar:nssv15168014;dbVar:nssv15161745;dbVar:nssv15161726;dbVar:nssv17970196;dbVar:nssv15161869;dbVar:nssv15161632;dbVar:nssv17970205;dbVar:nssv15133397;dbVar:nssv15154527;dbVar:nssv15146465\t7:10366-159119707;7:10705-159122532;7:43362-159119707;7:44936-159126310;7:54186-37129317;7:54186-41915483;7:10745751-35305167;7:11048841-52863626;7:11562625-36395416;7:27507833-39072473;7:30460550-34600277;7:30463887-43470805;7:33367925-61831899\t0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00\tBardet-Biedl syndrome 9, 615986 (3) AR\t\tdbVar:nssv15161318;dbVar:nssv17976840;dbVar:nssv18329275;dbVar:nssv15138559;dbVar:nssv15147510;dbVar:nssv15148432;morbid:BBS9;dbVar:nssv17971381;dbVar:nssv18790316;dbVar:nssv18790317\t7:54186-159075079;7:25451741-33864069;7:27133787-34466477;7:30977986-33440608;7:32718004-41084581;7:32911004-44576005;7:33169176-33675379;7:33296829-33427776;7:33376034-33427776;7:33388661-33397627\t0.00;0.00;0.00;0.01;0.00;0.00;0.03;0.11;0.27;1.56\t2\tBardet-Biedl_syndrome;Bardet-Biedl_syndrome_9\t\t\t\t\t\t\t\t\t\tIMH\t7:23891013-65526751;7:33013222-55782515\t0.3810\t\t\t\t\t\t\t\t\t0.325\t0.370\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t17.13\t-2.43637392050626\t-2.53125239294469\t-2.47162789907313\t-0.989035894351638\t-1.15018109964609\t\t\t\t\t\t\t607968\t\t\tyes\t\t4\t4.2117e-17\t6.3752e-10\t0.9\t1A (cf Gene_count, RE_gene, +0.00);2E-1 (BBS9, +0.90);3A (1 gene, +0.00);5F (+0.00)\t4\n7_33397468_33397607_DEL_1\t7\t33397468\t33397607\t-140\tDEL\tBBS9 inframe\tPathogenic\tNA\tsplit\tp14.3\tBBS9\t\t\t\tNM_001348036\t1\t33168896\t33645680\t140\t140\t5\tyes\t23\texon16-intron16\tCDS\t0\t5'\t33397467\t33397607\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t2\tBardet-Biedl_syndrome;Bardet-Biedl_syndrome_9\t\t\t\t\t\t\t\t\t\tIMH\t7:23891013-65526751;7:33013222-55782515\t0.3810\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t17.13\t-2.43637392050626\t-2.53125239294469\t-2.47162789907313\t-0.989035894351638\t-1.15018109964609\tBardet-Biedl syndrome;Bardet-Biedl syndrome 9;ciliopathy\tAR\tDefinitive;Strong;Supportive\t16380913;20177705;20301537[PMID];21209035;250490;251248;268436;282550\t27241\tHGNC:30000\t607968\tBardet-Biedl syndrome 9, 615986 (3) AR\tAR\tyes\t\t4\t4.2117e-17\t6.3752e-10\t\t\tfull=4\n12_63935482_64130626_DUP_1\t12\t63935482\t64130626\t195145\tDUP\tDPY19L2 (both DEL and DUP LCR mediated, precise breakpoints)\tPathogenic\tNA\tfull\tq14.2\tDPY19L2\tAVPR1A\tRXYLT1\t1\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tRXYLT1 (morbid/RE=GH_enhancer+GH_promoter);TBK1 (morbid/RE=EA_enhancer)\t\t\t\t\tSpermatogenic failure 9, 613958 (3) AR\t\tdbVar:nssv15119764;dbVar:nssv16213932;morbid:DPY19L2\t12:63952693-64062273;12:63952694-64062354;12:63989747-63989817\t\t\t\t\t\t\tdbVar:nssv15161620;dbVar:nssv15161414;nssv15161422;dbVar:nssv15171852;dbVar:nssv15161798;dbVar:nssv15171855\t12:2-133851895;12:173788-133777902;12:191620-133777645;12:282466-133773393;12:621221-133779118\t0.15;0.15;0.15;0.15;0.15\t\t\tdbVar:nssv15136921\t12:61300933-66961857\t3.45\t1\tSpermatogenic_failure_9\t\t\t\t\t\t\t\t\t\tIMH\t12:11501488-96031049;12:40933234-113477160\t0.1070\t\t\t12:63939159-64117235 1000g;12:63940549-64135811 DDD:38888;12:64069043-64136500 dgv280e214;12:63939159-64117235 1000g;12:63940549-64135811 DDD:38888;12:64069043-64136500 dgv280e214\t12:63936386-64131550 gnomAD-SV_v2.1_DUP_12_34997;12:63939159-64117235 esv3629757;12:64020291-64020367 DDD:38896;12:63936386-64131550 gnomAD-SV_v2.1_DUP_12_34997;12:63939159-64117235 esv3629757;12:64020291-64020367 DDD:38896\t\t\tchr12:63936000-63986000 dbVar;chr12:63946269-64141505 dbVar;chr12:63946732-63946956 dbVar;12:63946733-63946956 IMH;chr12:63959839-63959910 dbVar;12:64020291-64020367 DDD:38896;chr12:64069257-64069348 dbVar;chr12:64076528-64076585 dbVar;chr12:64116494-64116881 dbVar;chr12:63923277-64119251 dbVar;chr12:63939158-64117235 dbVar;12:63946730-63946956 esv2662353;12:63946732-63946956 gnomAD-SV_v2.1_DEL_12_129265;chr12:63950172-63950241 dbVar;chr12:64015848-64018740 dbVar;chr12:64065000-64130000 dbVar;chr12:64069869-64069961 dbVar;chr12:64103835-64106468 dbVar;chr12:64122000-64127000 dbVar\tchr12:63923277-64119251 dbVar;chr12:63939158-64117235 dbVar;12:63946730-63946956 esv2662353;12:63946732-63946956 gnomAD-SV_v2.1_DEL_12_129265;chr12:63950172-63950241 dbVar;chr12:64015848-64018740 dbVar;chr12:64065000-64130000 dbVar;chr12:64069869-64069961 dbVar;chr12:64103835-64106468 dbVar;chr12:64122000-64127000 dbVar;chr12:63936000-63986000 dbVar;chr12:63946269-64141505 dbVar;chr12:63946732-63946956 dbVar;12:63946733-63946956 IMH;chr12:63959839-63959910 dbVar;12:64020291-64020367 DDD:38896;chr12:64069257-64069348 dbVar;chr12:64076528-64076585 dbVar;chr12:64116494-64116881 dbVar\t0.530\t0.430\t12:63935369-63935656\tAluSq2\t12:64130409-64130696\tAluSq2\t\t\t12:63923419-63951619\t12:64119249-64146247\t\t\t\t\t\t\t\t81.13\t\t\t\t1.02618176351368\t1.66555804568279\t\t\t\t\t\t\t613893\t\t\tyes\t\t4\t1.0936e-13\t7.0294e-05\t0.0\t1A (cf Gene_count, RE_gene, +0.00);2B (cf po_P_gain_source, TS, OMIM_morbid, +0.00);2G (cf po_B_gain_someG_source, +0.00);2H-2 (DPY19L2, +0.00);3A (1 gene, +0.00);4O (cf po_B_gain_AllG_source, B_gain_source, po_B_gain_SomeG_source, +0.00);5F (+0.00)\t3\n12_63935482_64130626_DUP_1\t12\t63935482\t64130626\t195145\tDUP\tDPY19L2 (both DEL and DUP LCR mediated, precise breakpoints)\tPathogenic\tNA\tsplit\tq14.2\tDPY19L2\t\t\t\tNM_173812\t5\t63952692\t64062273\t109581\t2277\t100\tno\t22\ttxStart-txEnd\t5'UTR-3'UTR\t\t\t63952692\t64062273\t\t\t\t\t\tSpermatogenic failure 9, 613958 (3) AR\t\tdbVar:nssv16213932;morbid:DPY19L2\t12:63952693-64062273;12:63989747-63989817\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t1\tSpermatogenic_failure_9\t1000g;DDD:38888;esv3629757;gnomAD-SV_v2.1_DUP_12_34997\t12:63936386-64131550;12:63939159-64117235;12:63939159-64117235;12:63940549-64135811\t0.0257\tdbVar\tchr12:63923277-64119251;chr12:63939158-64117235;chr12:63946269-64141505\t0.01\t\t\t\tIMH\t12:11501488-96031049;12:40933234-113477160\t0.1070\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t81.13\t\t\t\t1.02618176351368\t1.66555804568279\tmale infertility due to globozoospermia;spermatogenic failure 9\tAR\tStrong;Supportive\t17008355;21397063;21397063[PMID]_22571172[PMID];21397064;22627659;22653751;25755131;25780569\t283417\tHGNC:19414\t613893\tSpermatogenic failure 9, 613958 (3) AR\tAR\tyes\t\t4\t1.0936e-13\t7.0294e-05\t\t\tfull=3\n16_31955077_34702366_DUP_1\t16\t31955077\t34702366\t2747290\tDUP\t\tBenign\tNA\tfull\tp11.2-p11.1\tLOC102723753;HERC2P4;TP53TG3D;LOC390705;LOC107987382;TP53TG3;SLC6A10P;TP53TG3C;LOC105369266;TP53TG3B;LOC107987386;ENPP7P13;MIR9901;CCNYL3;UBE2MP1;LOC112268173;LOC105371200;LINC01566\tZNF267\tFRG2DP\t18\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tdbVar:nssv15158812;dbVar:nssv15148703;dbVar:nssv15150639;nssv15151292;dbVar:nssv15158813;dbVar:nssv15158224;dbVar:nssv16216874;dbVar:nssv15126545;dbVar:nssv15133058;dbVar:nssv15126469;dbVar:nssv15150356\t16:61452-90294632;16:69194-90274381;16:85882-90155062;16:88166-90163275;16:88166-90274695;16:5805002-34230001;16:24381954-33923059;16:30703234-35147508;16:31986099-90294753;16:34197493-64509054\t3.04;3.05;3.05;3.05;3.05;8.00;20.63;61.82;4.66;1.67\t\t\tdbVar:nssv15141243\t16:28826163-34375007\t43.61\t\t\t\t\t\t\t\t\t\t\t\tIMH\t16:24121264-80276578;16:29238285-88227116\t0.4996\t\t\t16:31985111-31985155 DDD:47053;16:32020000-32026200 gnomAD-SV_v2.1_DUP_16_42021;16:32020000-32096000 gnomAD-SV_v2.1_DUP_16_42022;16:32123333-33664028 DDD:47062;16:32193431-32193767 DDD:47069;16:32232000-32237100 gnomAD-SV_v2.1_DUP_16_42027;16:32328772-32370968 1000g;16:32328772-32370968 dgv504e214;16:32366482-32410672 1000g;16:32366482-32410672 dgv505e214;16:32418984-32469917 1000g;16:32454389-32457877 IMH;16:32486529-32486871 DDD:47082;16:32511180-33912324 dgv821e212;16:32611030-32642738 1000g;16:32611030-32642738 dgv507e214;16:32740800-32750700 gnomAD-SV_v2.1_DUP_16_42037;16:32831660-32863935 1000g;16:32831660-32863935 dgv508e214;16:32903492-32927819 1000g...\t16:31749454-34012168 dgv50e203;16:31989000-32033000 gnomAD-SV_v2.1_DUP_16_42016;16:32020000-32096000 TS40:ISCA-46491;16:32055083-33851279 DDD:47058;16:32129166-32904510 DDD:47063;16:32202950-32209100 gnomAD-SV_v2.1_DUP_16_42026;16:32257510-32714406 esv2421440;16:32328772-32370968 1000g;16:32345385-33344188 IMH;16:32366482-32410672 1000g;16:32418984-32469917 1000g;16:32418984-32469917 dgv506e214;16:32473116-32486576 DDD:47080;16:32489448-32622550 dgv4e224;16:32589803-32684945 DDD:47091;16:32611030-32642738 1000g;16:32684868-32688916 DDD:47098;16:32831660-32863935 1000g;16:32831660-32863935 1000g;16:32900256-32908555 nsv514802...\t\t\tchr16:31933999-31991400 dbVar;chr16:31986799-32041500 dbVar;chr16:31998194-32020170 dbVar;chr16:32036000-32041500 dbVar;16:32055083-33851279 DDD:47058;16:32129166-32904510 DDD:47063;chr16:32289883-32289979 dbVar;16:32298051-32812316 DDD:47074;chr16:32328771-32370968 dbVar;chr16:32366481-32410672 dbVar;chr16:32393247-32393542 dbVar;chr16:32473466-32473664 dbVar;16:32485788-32648832 DDD:47081;16:32489448-32622550 dgv4e224;chr16:32494596-32496820 dbVar;chr16:32511665-32511727 dbVar;16:32524651-32525229 IMH;16:32532282-32533735 IMH;16:32562331-32601372 IMH;chr16:32586298-32586783 dbVar...\t16:31749454-34012168 dgv50e203;chr16:31971409-31971474 dbVar;chr16:31986800-31999150 dbVar;chr16:32010600-32020000 dbVar;16:32052946-32496748 DDD:47057;16:32123333-33664028 DDD:47062;16:32257510-32714406 esv2421440;chr16:32294372-32294452 dbVar;chr16:32312790-32313754 dbVar;16:32328772-32370968 1000g;chr16:32373626-32373758 dbVar;chr16:32418983-32469917 dbVar;chr16:32485126-32485204 dbVar;16:32486808-32486871 DDD:47084;chr16:32491490-32496732 dbVar;16:32511180-32878155 dgv819e212;16:32518848-32519371 IMH;16:32525918-32525974 IMH;16:32541493-32648861 DDD:47087;16:32562341-32600296 IMH...\t0.225\t0.335\t16:31948879-31955047;16:31955090-31955836\tL1PA3;L1M4c\t\t\t\t\t\t\t\t\t\t\t\t\t\t94.39\t\t\t\t1.56757328357025\t2.11426077975333\t\t\t\t\t\t\t\t\t\t\t\t9\t7.5995e-03\t6.4106e-01\t0.0\t1A (cf Gene_count, RE_gene, +0.00);2B (cf po_P_gain_source, TS, OMIM_morbid, +0.00);2G (cf po_B_gain_someG_source, +0.00);3A (18 genes, +0.00);4O (cf po_B_gain_AllG_source, B_gain_source, po_B_gain_SomeG_source, +0.00);5F (+0.00)\t3\n16_31955077_34702366_DUP_1\t16\t31955077\t34702366\t2747290\tDUP\t\tBenign\tNA\tsplit\tp11.2\tLOC102723753\t\t\t\tNR_135178\t1\t32163432\t32199434\t36002\t0\t0\tNA\t25\ttxStart-txEnd\tUTR\t\t\t32163432\t32199434\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tDDD:47058;DDD:47062;DDD:47063;dgv50e203\t16:31749454-34012168;16:32055083-33851279;16:32123333-33664028;16:32129166-32904510\t0.1314\tDDD:47057;DDD:47058;DDD:47062;DDD:47063;dgv50e203\t16:31749454-34012168;16:32052946-32496748;16:32055083-33851279;16:32123333-33664028;16:32129166-32904510\t0.1692\t\t\t\tIMH\t16:24121264-80276578;16:29238285-88227116\t0.4996\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tfull=3\n16_31955077_34702366_DUP_1\t16\t31955077\t34702366\t2747290\tDUP\t\tBenign\tNA\tsplit\tp11.2\tHERC2P4\t\t\t\tNR_109773\t1\t32181363\t32199434\t18071\t0\t0\tNA\t14\ttxStart-txEnd\tUTR\t\t\t32181363\t32199434\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tDDD:47058;DDD:47062;DDD:47063;dgv50e203\t16:31749454-34012168;16:32055083-33851279;16:32123333-33664028;16:32129166-32904510\t0.1314\tDDD:47057;DDD:47058;DDD:47062;DDD:47063;dgv50e203\t16:31749454-34012168;16:32052946-32496748;16:32055083-33851279;16:32123333-33664028;16:32129166-32904510\t0.1692\t\t\t\tIMH\t16:24121264-80276578;16:29238285-88227116\t0.4996\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t100289574\tHGNC:4872\t\t\t\t\t\t\t\t\t\t\tfull=3\n16_31955077_34702366_DUP_1\t16\t31955077\t34702366\t2747290\tDUP\t\tBenign\tNA\tsplit\tp11.2\tTP53TG3D\t\t\t\tNM_001243722\t3\t32264606\t32267249\t2643\t375\t100\tno\t2\ttxStart-txEnd\t5'UTR-3'UTR\t\t\t32264606\t32267249\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tDDD:47058;DDD:47062;DDD:47063;dgv50e203;esv2421440\t16:31749454-34012168;16:32055083-33851279;16:32123333-33664028;16:32129166-32904510;16:32257510-32714406\t0.1314\tDDD:47057;DDD:47058;DDD:47062;DDD:47063;dgv50e203;esv2421440\t16:31749454-34012168;16:32052946-32496748;16:32055083-33851279;16:32123333-33664028;16:32129166-32904510;16:32257510-32714406\t0.2300\t\t\t\tIMH\t16:24121264-80276578;16:29238285-88227116\t0.4996\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t92.49\t\t\t\t1.56757328357025\t2.11426077975333\t\t\t\t\t729264\tHGNC:44657\t\t\t\t\t\t9\t7.5995e-03\t6.4106e-01\t\t\tfull=3\n16_31955077_34702366_DUP_1\t16\t31955077\t34702366\t2747290\tDUP\t\tBenign\tNA\tsplit\tp11.2\tLOC390705\t\t\t\tNR_033866\t1\t32300867\t32301302\t435\t0\t0\tNA\t1\ttxStart-txEnd\tUTR\t\t\t32300867\t32301302\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tDDD:47058;DDD:47062;DDD:47063;dgv50e203;esv2421440\t16:31749454-34012168;16:32055083-33851279;16:32123333-33664028;16:32129166-32904510;16:32257510-32714406\t0.1314\tDDD:47057;DDD:47058;DDD:47062;DDD:47063;DDD:47074;dgv50e203;esv2421440\t16:31749454-34012168;16:32052946-32496748;16:32055083-33851279;16:32123333-33664028;16:32129166-32904510;16:32257510-32714406;16:32298051-32812316\t0.2300\t\t\t\tIMH\t16:24121264-80276578;16:29238285-88227116\t0.4996\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tfull=3\n16_31955077_34702366_DUP_1\t16\t31955077\t34702366\t2747290\tDUP\t\tBenign\tNA\tsplit\tp11.2\tLOC107987382\t\t\t\tNR_171659\t1\t32611681\t32626892\t15211\t0\t0\tNA\t8\ttxStart-txEnd\tUTR\t\t\t32611681\t32626892\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t1000g;DDD:47058;DDD:47062;DDD:47063;DDD:47091;IMH;dgv507e214;dgv50e203;dgv821e212;esv2421440\t16:31749454-34012168;16:32055083-33851279;16:32123333-33664028;16:32129166-32904510;16:32257510-32714406;16:32345385-33344188;16:32511180-33912324;16:32589803-32684945;16:32611030-32642738;16:32611030-32642738;16:32611030-32642738\t0.8086\tDDD:47058;DDD:47062;DDD:47063;DDD:47074;DDD:47081;DDD:47087;DDD:47091;DDD:47092;dbVar;dgv50e203;dgv819e212;esv2421440\t16:31749454-34012168;16:32055083-33851279;16:32123333-33664028;16:32129166-32904510;16:32257510-32714406;16:32298051-32812316;16:32485788-32648832;16:32511180-32878155;16:32541493-32648861;16:32589803-32684945;16:32590685-32653097;chr16:32611029-32642738\t0.2300\t\t\t\tIMH\t16:24121264-80276578;16:29238285-88227116;16:32354183-33512427;16:32354247-33512560\t0.4996\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tfull=3\n16_31955077_34702366_DUP_1\t16\t31955077\t34702366\t2747290\tDUP\t\tBenign\tNA\tsplit\tp11.2\tTP53TG3\t\t\t\tNM_016212\t5\t32684850\t32687486\t2636\t375\t100\tno\t2\ttxStart-txEnd\t5'UTR-3'UTR\t\t\t32684850\t32687486\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tDDD:47058;DDD:47062;DDD:47063;IMH;dgv50e203;dgv821e212;esv2421440\t16:31749454-34012168;16:32055083-33851279;16:32123333-33664028;16:32129166-32904510;16:32257510-32714406;16:32345385-33344188;16:32511180-33912324\t0.3314\tDDD:47058;DDD:47062;DDD:47063;DDD:47074;HI40:ISCA-46492;dbVar;dgv50e203;dgv819e212;esv2421440\t16:31749454-34012168;16:32055083-33851279;16:32123333-33664028;1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16:33230271-33739925;16:33270420-33827235;16:33302092-33630727;16:33473790-33628580;16:33526621-33659628;16:33560604-33662009\t0.5150\tDDD:47058;DDD:47062;DDD:47114;DDD:47126;dgv50e203\t16:31749454-34012168;16:32055083-33851279;16:32123333-33664028;16:33230271-33739925;16:33473790-33628580\t0.1243\t\t\t\tIMH\t16:24121264-80276578;16:29238285-88227116\t0.4996\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tfull=3\n16_31955077_34702366_DUP_1\t16\t31955077\t34702366\t2747290\tDUP\t\tBenign\tNA\tsplit\tp11.2\tMIR9901\t\t\t\tNR_162093\t1\t33966044\t33966140\t96\t0\t0\tNA\t1\ttxStart-txEnd\tUTR\t\t\t33966044\t33966140\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tdgv50e203\t16:31749454-34012168\t0.0700\tdgv50e203\t16:31749454-34012168\t0.0500\t\t\t\tIMH\t16:24121264-80276578;16:29238285-88227116\t0.4996\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t113218496\tHGNC:53993\t\t\t\t\t\t\t\t\t\t\tfull=3\n16_31955077_34702366_DUP_1\t16\t31955077\t34702366\t2747290\tDUP\t\tBenign\tNA\tsplit\tp11.2\tCCNYL3\t\t\t\tNR_158158\t1\t34264719\t34294699\t29980\t0\t0\tNA\t11\ttxStart-txEnd\tUTR\t\t\t34264719\t34294699\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tTS40:ISCA-37481;dgv51e203;nsv516385\t16:34197352-35283226;16:34202089-35147508;16:34259806-34805859\t0.0600\tHI40:ISCA-37481;dbVar\tchr16:34197000-34310700;chr16:34197000-34434000;16:34202089-35147508\t0.01\t\t\t\tIMH\t16:24121264-80276578;16:29238285-88227116;16:34180655-46447887;16:34188883-46442460\t0.4996\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t102724928\tHGNC:33206\t\t\t\t\t\t\t\t\t\t\tfull=3\n16_31955077_34702366_DUP_1\t16\t31955077\t34702366\t2747290\tDUP\t\tBenign\tNA\tsplit\tp11.2\tUBE2MP1\t\t\t\tNR_002837\t1\t34403801\t34404762\t961\t0\t0\tNA\t1\ttxStart-txEnd\tUTR\t\t\t34403801\t34404762\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tTS40:ISCA-37481;dgv51e203;nsv516385\t16:34197352-35283226;16:34202089-35147508;16:34259806-34805859\t0.0600\tHI40:ISCA-37481;dbVar\tchr16:34197000-34434000;16:34202089-35147508\t0.01\t\t\t\tIMH\t16:24121264-80276578;16:29238285-88227116;16:34180655-46447887;16:34188883-46442460\t0.4996\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t606551\tHGNC:32195\t\t\t\t\t\t\t\t\t\t\tfull=3\n16_31955077_34702366_DUP_1\t16\t31955077\t34702366\t2747290\tDUP\t\tBenign\tNA\tsplit\tp11.2\tLOC112268173\t\t\t\tNR_157261\t1\t34430129\t34431919\t1790\t0\t0\tNA\t1\ttxStart-txEnd\tUTR\t\t\t34430129\t34431919\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tTS40:ISCA-37481;dgv117e55;dgv51e203;nsv516385\t16:34197352-35283226;16:34202089-35147508;16:34259806-34805859;16:34410570-34796531\t0.0900\tHI40:ISCA-37481;dbVar\tchr16:34197000-34434000;16:34202089-35147508\t0.01\t\t\t\tIMH\t16:24121264-80276578;16:29238285-88227116;16:34180655-46447887;16:34188883-46442460\t0.4996\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tfull=3\n16_31955077_34702366_DUP_1\t16\t31955077\t34702366\t2747290\tDUP\t\tBenign\tNA\tsplit\tp11.2\tLOC105371200\t\t\t\tNR_188627\t1\t34442319\t34479081\t36762\t0\t0\tNA\t4\ttxStart-txEnd\tUTR\t\t\t34442319\t34479081\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tTS40:ISCA-37481;dgv117e55;dgv2962n100;dgv51e203;nsv516385\t16:34197352-35283226;16:34202089-35147508;16:34259806-34805859;16:34410570-34796531;16:34441796-34784591\t0.0900\tHI40:ISCA-37481\t16:34202089-35147508\t\t\t\t\tIMH\t16:24121264-80276578;16:29238285-88227116;16:34180655-46447887;16:34188883-46442460\t0.4996\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tfull=3\n16_31955077_34702366_DUP_1\t16\t31955077\t34702366\t2747290\tDUP\t\tBenign\tNA\tsplit\tp11.2-p11.1\tLINC01566\t\t\t\tNR_027080\t2\t34597786\t34626084\t28298\t0\t0\tNA\t7\ttxStart-txEnd\tUTR\t\t\t34597786\t34626084\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t1000g;DDD:47173;DDD:47179;DDD:47183;TS40:ISCA-37481;dgv117e55;dgv2962n100;dgv51e203;dgv824e212;esv2421698;esv3638500;gnomAD-SV_v2.1_DUP_16_42078;gnomAD-SV_v2.1_DUP_16_42081;nsv514804;nsv516385\t16:34197352-35283226;16:34202089-35147508;16:34259806-34805859;16:34410570-34796531;16:34441796-34784591;16:34445084-34774280;16:34456525-34736855;16:34457086-34712399;16:34457086-34712399;16:34465000-34757000;16:34470705-34757071;16:34471852-34731191;16:34476781-34747070;16:34567146-34656231;16:34572795-34661165\t0.1875\tHI40:ISCA-37481;dbVar\t16:34202089-35147508;chr16:34457085-34712399\t0.01\t\t\t\tIMH\t16:24121264-80276578;16:29238285-88227116;16:34180655-46447887;16:34188883-46442460\t0.4996\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t283914\tHGNC:27555\t\t\t\t\t\t\t\t\t\t\tfull=3\n16_33371444_34285848_DUP_1\t16\t33371444\t34285848\t914405\tDUP\t\tBenign\tNA\tfull\tp11.2\tENPP7P13;MIR9901;CCNYL3\tLOC107987386\tUBE2MP1\t3\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tdbVar:nssv15158812;dbVar:nssv15148703;dbVar:nssv15150639;nssv15151292;dbVar:nssv15158813;dbVar:nssv15158224;dbVar:nssv16216874;dbVar:nssv15126545;dbVar:nssv15133058;dbVar:nssv15126469;dbVar:nssv15150356\t16:61452-90294632;16:69194-90274381;16:85882-90155062;16:88166-90163275;16:88166-90274695;16:5805002-34230001;16:24381954-33923059;16:30703234-35147508;16:31986099-90294753;16:34197493-64509054\t1.01;1.01;1.02;1.02;1.01;3.02;5.78;20.57;1.57;0.29\t\t\tdbVar:nssv15141243\t16:28826163-34375007\t16.48\t\t\t\t\t\t\t\t\t\t\t\tIMH\t16:24121264-80276578;16:29238285-88227116\t0.4996\t\t\t16:32055083-33851279 DDD:47058;16:32511180-33912324 dgv821e212;16:33230271-33739925 DDD:47114;16:33302092-33630727 nsv514803;16:33406659-33406773 IMH;16:33446164-33480261 1000g;16:33464249-33499453 DDD:47125;16:33470756-33495606 1000g;16:33473790-33628580 DDD:47126;16:33484522-33543753 1000g;16:33524566-33570784 1000g;16:33524566-33570784 dgv513e214;16:33560604-33662009 DDD:47136;16:33588533-33626594 1000g;16:33588533-33626594 dgv514e214;16:33870630-33923125 esv3892830;16:33961733-33961778 DDD:47155;16:33983829-34200953 DDD:47158;16:34202089-35147508 TS40:ISCA-37481;\t16:31749454-34012168 dgv50e203;16:32123333-33664028 DDD:47062;16:33204449-33378738 DDD:47113;16:33270420-33827235 DDD:47116;16:33376004-33548487 DDD:47124;16:33446164-33480261 1000g;16:33446164-33480261 dgv510e214;16:33470756-33495606 1000g;16:33470756-33495606 dgv511e214;16:33484522-33543753 1000g;16:33484522-33543753 dgv512e214;16:33524566-33570784 1000g;16:33526621-33659628 DDD:47131;16:33582387-33629628 DDD:47138;16:33588533-33626594 1000g;16:33783303-33785890 DDD:47148;16:33879457-33912806 esv3892831;16:33961808-33964212 DDD:47156;16:34197352-35283226 dgv51e203;16:34259806-34805859 nsv516385\t\t\t16:32055083-33851279 DDD:47058;16:33204449-33378738 DDD:47113;chr16:33429584-33429643 dbVar;16:33433594-33433957 gnomAD-SV_v2.1_DEL_16_153879;chr16:33462282-33462339 dbVar;16:33464249-33499453 DDD:47125;chr16:33470755-33495606 dbVar;16:33473790-33628580 DDD:47126;16:33486471-33490892 DDD:47128;chr16:33524565-33570784 dbVar;16:33537417-33539750 esv2656732;chr16:33545163-33547147 dbVar;chr16:33559201-33559298 dbVar;chr16:33560642-33560933 dbVar;16:33582387-33629628 DDD:47138;16:33586836-33590310 1000g;chr16:33588532-33626594 dbVar;16:33589117-33599697 1000g;chr16:33597522-33597696 dbVar;16:33604896-33605259 gnomAD-SV_v2.1_DEL_16_153891...\t16:31749454-34012168 dgv50e203;16:32123333-33664028 DDD:47062;16:33230271-33739925 DDD:47114;chr16:33433594-33433957 dbVar;chr16:33446163-33480261 dbVar;16:33462282-33462339 gnomAD-SV_v2.1_DEL_16_153880;chr16:33467950-33468051 dbVar;chr16:33472157-33472229 dbVar;chr16:33484521-33543753 dbVar;chr16:33509280-33509607 dbVar;chr16:33529598-33529692 dbVar;chr16:33543857-33545591 dbVar;chr16:33556576-33556850 dbVar;16:33559201-33559298 gnomAD-SV_v2.1_DEL_16_153886;chr16:33564729-33565655 dbVar;chr16:33586835-33590310 dbVar;16:33586836-33590310 esv3638472;chr16:33589116-33599697 dbVar;16:33589117-33599697 esv3638477;chr16:33604896-33605259 dbVar...\t0.430\t0.365\t16:33371221-33371434\tAluSz6\t\t\t\t\t16:33241272-33372204;16:33325624-33372204;16:33330495-33372204;16:33330495-33372204;16:33342946-33372204;16:33353245-33373923;16:33355202-33372204;16:33363548-33517471\t\t16:32923001-33427100\tHigh Signal Region\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t0.0\t1A (cf Gene_count, RE_gene, +0.00);2B (cf po_P_gain_source, TS, OMIM_morbid, +0.00);2G (cf po_B_gain_someG_source, +0.00);2L (CCNYL3, +0.00);3A (3 genes, +0.00);4O (cf po_B_gain_AllG_source, B_gain_source, po_B_gain_SomeG_source, +0.00);5F (+0.00)\t3\n16_33371444_34285848_DUP_1\t16\t33371444\t34285848\t914405\tDUP\t\tBenign\tNA\tsplit\tp11.2\tENPP7P13\t\t\t\tNR_130771\t1\t33571843\t33586742\t14899\t0\t0\tNA\t3\ttxStart-txEnd\tUTR\t\t\t33571843\t33586742\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tDDD:47058;DDD:47062;DDD:47114;DDD:47116;DDD:47126;DDD:47131;DDD:47136;dgv50e203;dgv821e212;nsv514803\t16:31749454-34012168;16:32055083-33851279;16:32123333-33664028;16:32511180-33912324;16:33230271-33739925;16:33270420-33827235;16:33302092-33630727;16:33473790-33628580;16:33526621-33659628;16:33560604-33662009\t0.5150\tDDD:47058;DDD:47062;DDD:47114;DDD:47126;dgv50e203\t16:31749454-34012168;16:32055083-33851279;16:32123333-33664028;16:33230271-33739925;16:33473790-33628580\t0.1243\t\t\t\tIMH\t16:24121264-80276578;16:29238285-88227116\t0.4996\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tfull=3\n16_33371444_34285848_DUP_1\t16\t33371444\t34285848\t914405\tDUP\t\tBenign\tNA\tsplit\tp11.2\tMIR9901\t\t\t\tNR_162093\t1\t33966044\t33966140\t96\t0\t0\tNA\t1\ttxStart-txEnd\tUTR\t\t\t33966044\t33966140\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tdgv50e203\t16:31749454-34012168\t0.0700\tdgv50e203\t16:31749454-34012168\t0.0500\t\t\t\tIMH\t16:24121264-80276578;16:29238285-88227116\t0.4996\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t113218496\tHGNC:53993\t\t\t\t\t\t\t\t\t\t\tfull=3\n16_33371444_34285848_DUP_1\t16\t33371444\t34285848\t914405\tDUP\t\tBenign\tNA\tsplit\tp11.2\tCCNYL3\t\t\t\tNR_158158\t1\t34264719\t34294699\t21129\t0\t0\tNA\t11\ttxStart-intron9\tUTR\t82\t5'\t34264719\t34285848\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tTS40:ISCA-37481;dgv51e203;nsv516385\t16:34197352-35283226;16:34202089-35147508;16:34259806-34805859\t0.0600\tHI40:ISCA-37481;dbVar\tchr16:34197000-34310700;chr16:34197000-34434000;16:34202089-35147508\t0.01\t\t\t\tIMH\t16:24121264-80276578;16:29238285-88227116;16:34180655-46447887;16:34188883-46442460\t0.4996\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t102724928\tHGNC:33206\t\t\t\t\t\t\t\t\t\t\tfull=3\n5_723195_777000_DUP_1\t5\t723195\t777000\t53806\tDUP\t\tBenign\tNA\tfull\tp15.33\tZDHHC11B\tTPPP\tZDHHC11\t1\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tNDUFS6 (morbid/RE=ABC_enhancer);SDHA (morbid/RE=EA_enhancer);SLC9A3 (morbid/RE=GH_enhancer);TRIP13 (morbid/RE=ABC_enhancer+EA_enhancer)\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tdbVar:nssv15164761;dbVar:nssv15125831;dbVar:nssv15146713;dbVar:nssv15139036;dbVar:nssv15136993;dbVar:nssv15145871;dbVar:nssv15147378;dbVar:nssv15147960;dbVar:nssv15146962;dbVar:nssv15147414;dbVar:nssv15164765;dbVar:nssv15164764;dbVar:nssv15149091;dbVar:nssv15147291;dbVar:nssv15146993;dbVar:nssv15146992;dbVar:nssv15150844;dbVar:nssv17976838;dbVar:nssv15153658;dbVar:nssv15151111;nssv15151221\t5:13649-180905029;5:22150-10308848;5:22150-15851485;5:22150-1659250;5:22150-2324057;5:22150-23607162;5:22150-28075213;5:22150-33418294;5:22150-34041255;5:22150-73708550;5:25329-180693344;5:25329-18698028;5:25329-19661628;5:50094-46115086;5:54955-35680947;5:54955-45649963;5:113577-20240392;5:113577-29310520;5:113577-35739404;5:113578-180719789\t0.03;0.52;0.34;3.29;2.34;0.23;0.19;0.16;0.16;0.07;0.03;0.29;0.27;0.12;0.15;0.12;0.27;0.18;0.15;0.03\t5p15 terminal (Cri du chat syndrome) region\t\tdbVar:nssv18330851;dbVar:nssv18841914;dbVar:nssv17649947;dbVar:nssv15147173;dbVar:nssv15145875;dbVar:nssv15147440;dbVar:nssv15146459;dbVar:nssv15146622;dbVar:nssv15147702;dbVar:nssv15136268;dbVar:nssv15146696;dbVar:nssv15145969;dbVar:nssv15151220;dbVar:nssv15132269;dbVar:nssv15148862;dbVar:nssv15148231;dbVar:nssv15147402;dbVar:nssv15146458;dbVar:nssv15149597;dbVar:nssv15147956;dbVar:nssv15148968;dbVar:nssv15148844;dbVar:nssv15146717;dbVar:nssv15148985;dbVar:nssv15148016;dbVar:nssv15148112;dbVar:nssv15145972;dbVar:nssv16866488;dbVar:nssv15140376;dbVar:nssv15148058;dbVar:nssv15148554;dbVar:nssv15132604;dbVar:nssv15134412;dbVar:nssv15147416;dbVar:nssv15140515;dbVar:nssv15135741;dbVar:nssv15141721;dbVar:nssv15138139;dbVar:nssv15139127;dbVar:nssv15139876;dbVar:nssv15134733;dbVar:nssv15142657;dbVar:nssv15141520;dbVar:nssv15147171;dbVar:nssv15150118;dbVar:nssv15146522;dbVar:nssv15164763;dbVar:nssv15150859;dbVar:nssv15166282;dbVar:nssv15132966;dbVar:nssv15132967;HI3:ISCA-37390;dbVar:nssv15146165;nssv15146815;dbVar:nssv15148064;dbVar:nssv15132680;dbVar:nssv15223218;dbVar:nssv15134417;dbVar:nssv16216549;dbVar:nssv15149121;dbVar:nssv15150161;dbVar:nssv15137858;dbVar:nssv15150229;dbVar:nssv15149886;dbVar:nssv16208009;dbVar:nssv17976839;dbVar:nssv15148942;dbVar:nssv16208008;dbVar:nssv15149911;dbVar:nssv15151402;dbVar:nssv15153655;dbVar:nssv15152885;dbVar:nssv15151403;dbVar:nssv18326313;dbVar:nssv15149508;dbVar:nssv16208007;dbVar:nssv15151241;dbVar:nssv15150601;dbVar:nssv15150625;dbVar:nssv17977082;dbVar:nssv15145995;dbVar:nssv15151861;dbVar:nssv16255066;dbVar:nssv16208006;dbVar:nssv16208011;dbVar:nssv15142295;dbVar:nssv16208010;dbVar:nssv15153656;dbVar:nssv15152886;dbVar:nssv15137538;dbVar:nssv15153657;dbVar:nssv17976724;dbVar:nssv15146000;dbVar:nssv17956677;dbVar:nssv18330187;dbVar:nssv18329119;dbVar:nssv18329189;dbVar:nssv15606071;dbVar:nssv15606072;dbVar:nssv16213555;dbVar:nssv16213990;dbVar:nssv18787102;dbVar:nssv18790308\t5:2-32091038;5:10002-14320109;5:13201-4012072;5:22150-10044199;5:22150-11429370;5:22150-11530503;5:22150-12004203;5:22150-12820111;5:22150-13362684;5:22150-1429714;5:22150-16584684;5:22150-16930125;5:22150-17788806;5:22150-1826370;5:22150-21217229;5:22150-21726469;5:22150-22775404;5:22150-23132155;5:22150-24835567;5:22150-25699714;5:22150-26594000;5:22150-27188057;5:22150-27485726;5:22150-27611270;5:22150-27788723;5:22150-28429348;5:22150-28589299;5:22150-29048823;5:22150-2965987;5:22150-32248116;5:22150-34041196;5:22150-3404358;5:22150-3557056;5:22150-35831640;5:22150-4163847;5:22150-4260264;5:22150-4641409;5:22150-4833739;5:22150-5060009;5:22150-5102699;5:22150-6060215;5:22150-6112711;5:22150-6500967;5:22150-7213388;5:22150-9958240;5:22420-19281001;5:25329-18662625;5:25329-30672798;5:25329-31343671;5:37693-2747022;5:37693-2913319;5:37694-11347262;5:50094-15678560;5:50094-30112642;5:50094-4014761;5:52187-4163906;5:54955-5603514;5:71905-22078969;5:79147-15509107;5:79147-22152284;5:95244-5834664;5:113577-10163809;5:113577-10729838;5:113577-11767720;5:113577-12601027;5:113577-14684471;5:113577-14738180;5:113577-15291661;5:113577-15822225;5:113577-1708530;5:113577-1816055;5:113577-19167699;5:113577-2027194;5:113577-23047959;5:113577-23364376;5:113577-25091472;5:113577-26234903;5:113577-26948599;5:113577-30712376;5:113577-33998394;5:113577-4175855;5:113577-4305172;5:113577-4325585;5:113577-5194484;5:113577-5380741;5:113577-5657333;5:113577-5884399;5:113577-6125331;5:113577-6244090;5:113577-7946262;5:113577-8007018;5:113577-8876045;5:113578-16952167;5:113578-17654787;5:113578-26164852;5:113578-31448527;5:140475-26906925;5:140475-9792158;5:218462-1295161;5:218465-1297488;5:218472-1895829;5:482644-1895829\t0.17;0.38;1.35;0.54;0.47;0.47;0.45;0.42;0.40;3.82;0.32;0.32;0.30;2.98;0.25;0.25;0.24;0.23;0.22;0.21;0.20;0.20;0.20;0.20;0.19;0.19;0.19;0.19;1.83;0.17;0.16;1.59;1.52;0.15;1.30;1.27;1.16;1.12;1.07;1.06;0.89;0.88;0.83;0.75;0.54;0.28;0.29;0.18;0.17;1.99;1.87;0.48;0.34;0.18;1.36;1.31;0.97;0.24;0.35;0.24;0.94;0.54;0.51;0.46;0.43;0.37;0.37;0.35;0.34;3.37;3.16;0.28;2.81;0.23;0.23;0.22;0.21;0.20;0.18;0.16;1.32;1.28;1.28;1.06;1.02;0.97;0.93;0.90;0.88;0.69;0.68;0.61;0.32;0.31;0.21;0.17;0.20;0.56;5.00;4.99;3.21;3.81\t\t\tDDD:16279;DDD:16284;dgv131e203\t5:653582-875018;5:686604-840273;5:708603-865477\t0.1231\tDDD:16279;DDD:16284;dgv1000e199;dgv131e203\t5:653582-875018;5:682475-788359;5:686604-840273;5:708603-865477\t0.0497\t\t\t\tIMH\t5:238915-1591166;5:244073-1583559;5:244336-1583852;5:261961-1570436\t0.2771\t\t\t5:686604-840273 DDD:16279;5:714989-733938 1000g;5:714989-733938 1000g;5:717638-748444 DDD:16285;5:757677-778933 1000g;5:757677-778933 1000g;5:763398-838450 DDD:16291\t5:653582-875018 dgv131e203;5:708603-865477 DDD:16284;5:714989-733938 1000g;5:714989-733938 dgv1061e214;5:754104-754760 IMH;5:757677-778933 1000g;5:757677-778933 dgv1062e214\t\t\t5:682475-788359 dgv1000e199;5:708603-865477 DDD:16284;5:714989-733938 1000g;chr5:724284-724491 dbVar;5:747151-776399 DDD:16288;chr5:757676-778933 dbVar;5:757677-778933 esv3603772;chr5:764454-764539 dbVar;\t5:653582-875018 dgv131e203;5:686604-840273 DDD:16279;chr5:714988-733938 dbVar;5:714989-733938 esv3603766;chr5:725960-726319 dbVar;5:747846-753492 esv2673755;5:757677-778933 1000g;5:763398-838450 DDD:16291;chr5:774523-774617 dbVar\t0.395\t0.580\t5:721917-723166\tL1ME3F\t\t\t\t\t5:686123-731394\t5:770128-777143\t\t\t\t\t\t\t\t98.37\t\t\t\t0.535222227518795\t-0.0274451648003615\t\t\t\t\t\t\t\t\t\t\t\t8\t3.6787e-13\t4.3228e-02\t0.0\t1A (cf Gene_count, RE_gene, +0.00);2B (cf po_P_gain_source, TS, OMIM_morbid, +0.00);2E (cf B_gain_source, +0.00);2L (ZDHHC11B, +0.00);3A (1 gene, +0.00);4O (cf po_B_gain_AllG_source, B_gain_source, po_B_gain_SomeG_source, +0.00);5F (+0.00)\t3\n5_723195_777000_DUP_1\t5\t723195\t777000\t53806\tDUP\t\tBenign\tNA\tsplit\tp15.33\tZDHHC11B\t\t\t\tNM_001351303\t2\t710469\t784844\t53806\t1058\t94\tyes\t14\tintron1-intron12\t5'UTR-CDS\t6214\t3'\t723194\t777000\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tDDD:16279;DDD:16284;dgv131e203\t5:653582-875018;5:686604-840273;5:708603-865477\t0.1231\tDDD:16279;DDD:16284;dgv1000e199;dgv131e203\t5:653582-875018;5:682475-788359;5:686604-840273;5:708603-865477\t0.0497\t\t\t\tIMH\t5:238915-1591166;5:244073-1583559;5:244336-1583852;5:261961-1570436\t0.2771\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t98.37\t\t\t\t0.535222227518795\t-0.0274451648003615\t\t\t\t\t653082\tHGNC:32962\t\t\t\t\t\t8\t3.6787e-13\t4.3228e-02\t\t\tfull=3\n7_38296177_38352444_DEL_1\t7\t38296177\t38352444\t-56268\tDEL\t\tBenign\tNA\tfull\tp14.1\tTARP\tSTARD3NL\tTRG-AS1\t1\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tSFRP4 (morbid/RE=ABC_enhancer);VPS41 (morbid/RE=ABC_enhancer)\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tdbVar:nssv15777247;dbVar:nssv15168013;dbVar:nssv15161666;nssv15161679;dbVar:nssv15168014;dbVar:nssv15161726;dbVar:nssv15161869;dbVar:nssv17970205;dbVar:nssv15154527;dbVar:nssv15146465;dbVar:nssv15166972\t7:10366-159119707;7:10705-159122532;7:43362-159119707;7:44936-159126310;7:54186-41915483;7:11048841-52863626;7:27507833-39072473;7:30463887-43470805;7:33367925-61831899;7:37213109-40255122\t0.04;0.04;0.04;0.04;0.13;0.13;0.49;0.43;0.20;1.85\t\t\tdbVar:nssv15161318;dbVar:nssv15147510;dbVar:nssv15148432;dbVar:nssv15147453;dbVar:nssv15145850;dbVar:nssv15148950\t7:54186-159075079;7:32718004-41084581;7:32911004-44576005;7:35500387-42053399;7:37343083-48700334;7:38217602-45343699\t0.04;0.67;0.48;0.86;0.50;0.79\t\t\tdgv1888e212\t7:38286516-38394857\t0.0100\t\t\t\t\t\t\tIMH\t7:23891013-65526751;7:33013222-55782515\t0.3810\t\t\t7:38286516-38394857 dgv1888e212\t7:38283523-38309532 DDD:23873\t\t\tchr7:38309816-38312727 dbVar;chr7:38312421-38313034 dbVar;chr7:38318010-38318532 dbVar;chr7:38321639-38325867 dbVar;chr7:38325667-38325867 dbVar;chr7:38325667-38328166 dbVar;chr7:38331989-38335441 dbVar;chr7:38331989-38336295 dbVar;chr7:38348388-38349972 dbVar\tchr7:38295995-38331222 dbVar;chr7:38309816-38313034 dbVar;chr7:38315910-38331224 dbVar;chr7:38321639-38325667 dbVar;chr7:38321639-38326916 dbVar;chr7:38325667-38327016 dbVar;chr7:38325867-38328166 dbVar;chr7:38331989-38335610 dbVar;chr7:38335441-38335779 dbVar\t0.365\t0.320\t7:38296252-38296527\tAluSx\t\t\t\t\t7:38284220-38298557\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t0.0\t1A (cf Gene_count, RE_gene, +0.00);2B (cf po_P_loss_source, HI, OMIM_morbid, +0.00;2G (cf po_B_loss_someG_source, +0.00);3A (1 gene, +0.00);5F (+0.00)\t3\n7_38296177_38352444_DEL_1\t7\t38296177\t38352444\t-56268\tDEL\t\tBenign\tNA\tsplit\tp14.1\tTARP\t\t\t\tNM_001003806\t2\t38299243\t38313237\t13994\t336\t100\tno\t4\ttxStart-txEnd\t5'UTR-3'UTR\t\t\t38299243\t38313237\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tdgv1888e212\t7:38286516-38394857\t0.0100\tdbVar\tchr7:38295995-38331222\t0.01\t\t\t\tIMH\t7:23891013-65526751;7:33013222-55782515\t0.3810\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tfull=3\n8_7169491_7753583_DEL_1\t8\t7169491\t7753583\t-584093\tDEL\t\tBenign\tNA\tfull\tp23.1\tFAM66B;DEFB109B;USP17L1;USP17L4;ZNF705G;DEFB4B;DEFB103B;SPAG11B;DEFB104B;DEFB106B;DEFB105B;DEFB107B;PRR23D1;FAM90A7;FAM90A22;FAM90A23;FAM90A14;FAM90A18;FAM90A16;FAM90A8;FAM90A17;FAM90A19;FAM90A9;FAM90A10;PRR23D2;DEFB107A;DEFB105A;DEFB106A;DEFB104A;SPAG11A;DEFB103A;DEFB4A\tFAM90A20\tZNF705B\t32\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tMCPH1 (morbid/RE=ABC_enhancer+GH_promoter_enhancer)\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tdbVar:nssv15169207;dbVar:nssv15128680;dbVar:nssv15161508;dbVar:nssv15161747;dbVar:nssv17976867;dbVar:nssv17957391;dbVar:nssv15154583;dbVar:nssv15161801;nssv15777239;nssv17976962;dbVar:nssv15154584;dbVar:nssv16206921;dbVar:nssv15154580;dbVar:nssv15161417;nssv15161657;dbVar:nssv15147671;dbVar:nssv15161846;dbVar:nssv15150473;dbVar:nssv15127651;dbVar:nssv15149098;dbVar:nssv15169210;dbVar:nssv15154582;dbVar:nssv15146537;dbVar:nssv15161807;dbVar:nssv15161553;dbVar:nssv15161105;dbVar:nssv15161095;dbVar:nssv15161561;dbVar:nssv15161078;dbVar:nssv15147455;dbVar:nssv16736635;dbVar:nssv15161269;dbVar:nssv15161748;dbVar:nssv15161749;dbVar:nssv15143576;dbVar:nssv15161775;dbVar:nssv15146180;dbVar:nssv15161087;dbVar:nssv15161068;dbVar:nssv15161792;dbVar:nssv15606063;dbVar:nssv15151542;dbVar:nssv15161084;dbVar:nssv16206931;dbVar:nssv15154577;dbVar:nssv15161089;dbVar:nssv15151538;dbVar:nssv15152254;dbVar:nssv18842054;dbVar:nssv15161540;dbVar:nssv15161727;dbVar:nssv15161764\t8:10214-146293414;8:13939-146304022;8:46311-11879315;8:46311-30472220;8:158049-10348413;8:158049-11936107;8:158049-13974319;8:158049-146295771;8:158049-15423270;8:158049-8102819;8:158049-9750676;8:158050-146295771;8:158992-13304906;8:158992-146280828;8:158992-17536147;8:163683-46938942;8:164985-11860845;8:164985-146293414;8:168484-13147575;8:169854-10022996;8:176453-12556063;8:176453-12570496;8:176453-146294098;8:176453-16137655;8:176453-34349408;8:176453-37879246;8:176453-7838959;8:176815-43396776;8:191531-146274835;8:191531-146280020;8:191531-17536206;8:191531-22404983;8:191531-23055911;8:191531-7752586;8:191606-146280167;8:191606-24514484;8:191606-30948590;8:194618-13947374;8:1825201-24533193;8:6961184-12157391;8:6999220-11895232;8:6999220-11898980;8:6999220-38553064;8:6999220-8881836;8:7053187-11805960;8:7080282-12045269;8:7169491-12404062;8:7268820-12039974;8:7691902-12039974\t0.40;0.40;4.94;1.92;5.73;4.96;4.23;0.40;3.83;7.35;6.09;0.40;4.44;0.40;3.36;1.25;4.99;0.40;4.50;5.93;4.72;4.71;0.40;3.66;1.71;1.55;7.62;1.35;0.40;0.40;3.37;2.63;2.55;7.71;0.40;2.40;1.90;4.25;2.57;11.24;11.93;11.92;1.85;31.03;12.29;11.76;11.16;10.16;1.42\t\t\tdbVar:nssv15168702;dbVar:nssv15169206;dbVar:nssv18842057;dbVar:nssv17956019;dbVar:nssv15154581;dbVar:nssv18326425;dbVar:nssv15149861;dbVar:nssv15775686;dbVar:nssv17976739;dbVar:nssv16208166;dbVar:nssv15774257;dbVar:nssv15149509;dbVar:nssv18330306;dbVar:nssv18329623;dbVar:nssv16216869;dbVar:nssv15169209;dbVar:nssv15223191;dbVar:nssv15147275;dbVar:nssv15148964;dbVar:nssv15147296;dbVar:nssv15146181;nssv15146816;dbVar:nssv15606064;dbVar:nssv15146660;dbVar:nssv18841910;dbVar:nssv15161264;nssv15161582;dbVar:nssv15145917;dbVar:nssv15161283;dbVar:nssv15161284;dbVar:nssv15161070;dbVar:nssv15141976;dbVar:nssv15161050\t8:10214-10197718;8:10214-8948469;8:10502-11142629;8:10502-7214947;8:158049-10939681;8:158049-11281408;8:158049-13309069;8:158049-14214722;8:158049-30187456;8:158049-9025197;8:158049-9393052;8:158049-9749574;8:158050-10965627;8:158050-18936715;8:161517-11516619;8:164985-10007227;8:176815-7753583;8:191531-10049105;8:191531-10315994;8:191531-10724642;8:191531-7752586;8:194618-7787444;8:360370-7334625;8:399894-23712417;8:2292236-27361796;8:3791728-11384448;8:7053187-12241152;8:7092360-12372324;8:7169491-12404062;8:7268820-11805960;8:7268820-11819316\t5.73;6.53;5.25;0.63;5.42;5.25;4.44;4.16;1.95;6.59;6.32;6.09;5.40;3.11;5.14;5.93;7.71;5.93;5.77;5.55;7.71;7.69;2.37;2.51;2.33;7.69;11.26;11.06;11.16;10.68;10.65\t\t\tDDD:26674;TS40:ISCA-37472;esv2761169;esv2764098\t8:6858816-8072303;8:6959834-8600711;8:7024892-8031414;8:7053187-8130689\t0.2355\tDDD:26674;HI40:ISCA-37472;esv2761169;esv2764098\t8:6858816-8072303;8:6959834-8600711;8:7024892-8031414;8:7053187-8130689\t0.2237\t\t\t\t\t\t\t\t\t8:6959834-8600711 esv2764098;8:7024892-8031414 DDD:26674;8:7053187-8130689 TS40:ISCA-37472;8:7170611-7177489 nsv515099;8:7201176-7392220 DDD:26689;8:7212583-7227421 1000g;8:7212583-7227421 TS40:ISCA-46631;8:7241528-7403182 nsv515100;8:7308244-7308706 DDD:26704;8:7632945-7856630 DDD:26727;8:7717878-7717938 DDD:26737;8:7734213-7856702 DDD:26743;8:7737000-7743100 gnomAD-SV_v2.1_DUP_8_23708;8:6959834-8600711 esv2764098;8:7024892-8031414 DDD:26674;8:7053187-8130689 TS40:ISCA-37472;8:7170611-7177489 nsv515099;8:7201176-7392220 DDD:26689;8:7212583-7227421 1000g;8:7212583-7227421 TS40:ISCA-46631...\t8:6858816-8072303 esv2761169;8:6985776-7230992 DDD:26670;8:7035907-7428513 DDD:26675;8:7154889-7213289 DDD:26682;8:7190891-7190961 DDD:26685;8:7212583-7227421 1000g;8:7212583-7227421 1000g;8:7212583-7227421 dgv1365e214;8:7250369-7832042 dgv6936n100;8:7401394-7472190 DDD:26720;8:7634705-7829839 DDD:26729;8:7718891-7784263 DDD:26742;8:7737000-7743100 TS40:ISCA-46381;8:6858816-8072303 esv2761169;8:6985776-7230992 DDD:26670;8:7035907-7428513 DDD:26675;8:7154889-7213289 DDD:26682;8:7190891-7190961 DDD:26685;8:7212583-7227421 1000g;8:7212583-7227421 1000g...\t\t\t8:6959834-8600711 esv2764098;8:7024892-8031414 DDD:26674;8:7053187-8130689 HI40:ISCA-37472;8:7154889-7213289 DDD:26682;8:7158202-7189800 DDD:26683;chr8:7179582-7191032 dbVar;8:7179583-7191032 esv3616115;8:7190891-7190961 DDD:26685;chr8:7201000-7206400 dbVar;chr8:7204184-7204308 dbVar;8:7212583-7227421 1000g;chr8:7221359-7221602 dbVar;8:7228000-7235000 gnomAD-SV_v2.1_DEL_8_89335;chr8:7286205-7286328 dbVar;chr8:7326402-7326559 dbVar;8:7355000-7363000 gnomAD-SV_v2.1_DEL_8_89340;8:7355294-7364762 1000g;8:7401394-7472190 DDD:26720;8:7402900-7419700 gnomAD-SV_v2.1_DEL_8_89341;8:7405950-7443050 gnomAD-SV_v2.1_DEL_8_89342...\t8:6858816-8072303 esv2761169;8:6985776-7230992 DDD:26670;8:7035907-7428513 DDD:26675;chr8:7085462-7537934 dbVar;8:7158046-7189992 esv2675221;chr8:7175745-7175870 dbVar;8:7179583-7191032 1000g;chr8:7180382-7180743 dbVar;8:7190892-7196288 DDD:26687;8:7201000-7206400 gnomAD-SV_v2.1_DEL_8_89332;chr8:7212582-7227421 dbVar;8:7212583-7227421 esv3616116;chr8:7228000-7235000 dbVar;chr8:7276552-7277128 dbVar;8:7308244-7308706 DDD:26704;chr8:7355000-7363000 dbVar;chr8:7355293-7364762 dbVar;8:7355294-7364762 esv3616120;chr8:7402900-7419700 dbVar;chr8:7405950-7443050 dbVar...\t0.260\t0.330\t\t\t\t\t\t\t8:7150797-7184572;8:7150797-7195814;8:7150797-7200543;8:7150798-7238459\t8:7600001-7825413\t8:7012601-8066200\tHigh Signal Region\t8:7012601-8066200\tHigh Signal Region\t\t\t\t99.72\t\t\t\t2.14121257165536\t2.19863945242443\t\t\t\t\t\t\t\t\t\t\t\t8\t4.2180e-01\t5.1947e-01\t-0.55\t1A (cf Gene_count, RE_gene, +0.00);2F/4O (cf B_loss_source, -1.00);2B (cf po_P_loss_source, HI, OMIM_morbid, +0.00;3B (32 genes, +0.45);5F 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xEnd\t5'UTR-3'UTR\t\t\t7669241\t7673238\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tDDD:26674;DDD:26727;DDD:26729;TS40:ISCA-37472;dgv6936n100;esv2761169;esv2764098\t8:6858816-8072303;8:6959834-8600711;8:7024892-8031414;8:7053187-8130689;8:7250369-7832042;8:7632945-7856630;8:7634705-7829839\t0.2355\tDDD:26674;DDD:26727;HI40:ISCA-37472;esv2761169;esv2764098\t8:6858816-8072303;8:6959834-8600711;8:7024892-8031414;8:7053187-8130689;8:7632945-7856630\t0.2237\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t92.48\t\t\t\t\t\t\t\t\t\t245910\tHGNC:18086\t\t\t\t\t\t9\t3.2633e-01\t\t\t\tfull=3\n8_7169491_7753583_DEL_1\t8\t7169491\t7753583\t-584093\tDEL\t\tBenign\tNA\tsplit\tp23.1\tDEFB105A\t\t\t\tNM_152250\t3\t7678525\t7681402\t2877\t237\t100\tno\t3\ttxStart-txEnd\t5'UTR-3'UTR\t\t\t7678525\t7681402\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tDDD:26674;DDD:26727;DDD:26729;TS40:ISCA-37472;dgv6936n100;esv2761169;esv2764098\t8:6858816-8072303;8:6959834-8600711;8:7024892-8031414;8:7053187-8130689;8:7250369-7832042;8:7632945-7856630;8:7634705-7829839\t0.2355\tDDD:26674;DDD:26727;HI40:ISCA-37472;esv2761169;esv2764098\t8:6858816-8072303;8:6959834-8600711;8:7024892-8031414;8:7053187-8130689;8:7632945-7856630\t0.2237\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t90.61\t\t\t\t0.918523398770926\t0.00809335391872301\t\t\t\t\t245908\tHGNC:18087\t\t\t\t\t\t8\t3.7719e-01\t4.3625e-01\t\t\tfull=3\n8_7169491_7753583_DEL_1\t8\t7169491\t7753583\t-584093\tDEL\t\tBenign\tNA\tsplit\tp23.1\tDEFB106A\t\t\t\tNM_152251\t4\t7682660\t7686575\t3915\t198\t100\tno\t2\ttxStart-txEnd\t5'UTR-3'UTR\t\t\t7682660\t7686575\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tDDD:26674;DDD:26727;DDD:26729;TS40:ISCA-37472;dgv6936n100;esv2761169;esv2764098\t8:6858816-8072303;8:6959834-8600711;8:7024892-8031414;8:7053187-8130689;8:7250369-7832042;8:7632945-7856630;8:7634705-7829839\t0.2355\tDDD:26674;DDD:26727;HI40:ISCA-37472;esv2761169;esv2764098\t8:6858816-8072303;8:6959834-8600711;8:7024892-8031414;8:7053187-8130689;8:7632945-7856630\t0.2237\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t90.45\t\t\t\t0.676417083229402\t1.6332400949348\t\t\t\t\t245909\tHGNC:18088\t\t\t\t\t\t9\t8.5821e-03\t4.0931e-01\t\t\tfull=3\n8_7169491_7753583_DEL_1\t8\t7169491\t7753583\t-584093\tDEL\t\tBenign\tNA\tsplit\tp23.1\tDEFB104A\t\t\t\tNM_080389\t3\t7693957\t7698764\t4807\t219\t100\tno\t2\ttxStart-txEnd\t5'UTR-3'UTR\t\t\t7693957\t7698764\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tDDD:26674;DDD:26727;DDD:26729;TS40:ISCA-37472;dgv6936n100;esv2761169;esv2764098\t8:6858816-8072303;8:6959834-8600711;8:7024892-8031414;8:7053187-8130689;8:7250369-7832042;8:7632945-7856630;8:7634705-7829839\t0.2355\tDDD:26674;DDD:26727;HI40:ISCA-37472;esv2761169;esv2764098\t8:6858816-8072303;8:6959834-8600711;8:7024892-8031414;8:7053187-8130689;8:7632945-7856630\t0.2237\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t96.98\t\t\t\t1.33624136747443\t2.19863945242443\t\t\t\t\t140596\tHGNC:18115\t\t\t\t\t\t9\t9.3748e-02\t5.1947e-01\t\t\tfull=3\n8_7169491_7753583_DEL_1\t8\t7169491\t7753583\t-584093\tDEL\t\tBenign\tNA\tsplit\tp23.1\tSPAG11A\t\t\t\tNM_001395484\t1\t7705529\t7718465\t12936\t402\t100\tno\t3\ttxStart-txEnd\t5'UTR-3'UTR\t\t\t7705529\t7718465\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tDDD:26674;DDD:26727;DDD:26729;TS40:ISCA-37472;dgv6936n100;esv2761169;esv2764098\t8:6858816-8072303;8:6959834-8600711;8:7024892-8031414;8:7053187-8130689;8:7250369-7832042;8:7632945-7856630;8:7634705-7829839\t0.2355\tDDD:26674;DDD:26727;HI40:ISCA-37472;esv2761169;esv2764098\t8:6858816-8072303;8:6959834-8600711;8:7024892-8031414;8:7053187-8130689;8:7632945-7856630\t0.2237\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t97.15\t\t\t\t0.140072348156658\t0.903069021299127\t\t\t\t\t653423\tHGNC:33342\t\t\t\t\t\t9\t6.9645e-05\t3.9012e-02\t\t\tfull=3\n8_7169491_7753583_DEL_1\t8\t7169491\t7753583\t-584093\tDEL\t\tBenign\tNA\tsplit\tp23.1\tDEFB103A\t\t\t\tNM_001081551\t4\t7738913\t7740185\t1272\t204\t100\tno\t2\ttxStart-txEnd\t5'UTR-3'UTR\t\t\t7738913\t7740185\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tDDD:26674;DDD:26727;DDD:26729;DDD:26742;DDD:26743;TS40:ISCA-37472;TS40:ISCA-46381;dgv6936n100;esv2761169;esv2764098;gnomAD-SV_v2.1_DUP_8_23708\t8:6858816-8072303;8:6959834-8600711;8:7024892-8031414;8:7053187-8130689;8:7250369-7832042;8:7632945-7856630;8:7634705-7829839;8:7718891-7784263;8:7734213-7856702;8:7737000-7743100;8:7737000-7743100\t0.2355\tDDD:26674;DDD:26727;HI40:ISCA-37472;HI40:ISCA-46380;dbVar;esv2761169;esv2764098;gnomAD-SV_v2.1_DEL_8_89353\t8:6858816-8072303;8:6959834-8600711;8:7024892-8031414;8:7053187-8130689;8:7632945-7856630;8:7736500-7764500;chr8:7736500-7764500;8:7736500-7764500\t0.3262\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t93.4\t\t\t\t\t\t\t\t\t\t414325\tHGNC:15967\t\t\t\t\t\t\t\t\t\t\tfull=3\n8_7169491_7753583_DEL_1\t8\t7169491\t7753583\t-584093\tDEL\t\tBenign\tNA\tsplit\tp23.1\tDEFB4A\t\t\t\tNM_004942\t4\t7752198\t7754238\t1385\t58\t29\tyes\t2\ttxStart-intron1\t5'UTR-CDS\t412\t3'\t7752198\t7753583\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tDDD:26674;DDD:26727;DDD:26729;DDD:26742;DDD:26743;TS40:ISCA-37472;dgv6936n100;esv2761169;esv2764098\t8:6858816-8072303;8:6959834-8600711;8:7024892-8031414;8:7053187-8130689;8:7250369-7832042;8:7632945-7856630;8:7634705-7829839;8:7718891-7784263;8:7734213-7856702\t0.2355\tDDD:26674;DDD:26727;HI40:ISCA-37472;HI40:ISCA-46380;HI40:ISCA-46382;dbVar;esv2761169;esv2764098;gnomAD-SV_v2.1_DEL_8_89353;gnomAD-SV_v2.1_DEL_8_89355\t8:6858816-8072303;8:6959834-8600711;8:7024892-8031414;8:7053187-8130689;8:7632945-7856630;8:7736500-7764500;chr8:7736500-7764500;8:7736500-7764500;8:7745000-7754100;chr8:7745000-7754100;8:7745000-7754100\t0.5182\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t97.87\t\t\t\t1.12959151611996\t0.758429673080804\t\t\t\t\t1673\tHGNC:2767\t\t\t\t\t\t9\t1.1637e-03\t3.9981e-01\t\t\tfull=3\n1_149041934_149209289_DEL_1\t1\t149041934\t149209289\t-167356\tDEL\t\tBenign\tNA\tfull\tq21.2\tRNVU1-17\tLSP1P5\tRNVU1-18\t1\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tdbVar:nssv15156967;dbVar:nssv15156970;dbVar:nssv15149867;nssv15151118;dbVar:nssv18842007;dbVar:nssv15140065;dbVar:nssv15127264;dbVar:nssv15140622;dbVar:nssv15142143;dbVar:nssv15139736;dbVar:nssv15136257;dbVar:nssv15137789;dbVar:nssv15135435;dbVar:nssv15132352;dbVar:nssv15127572;dbVar:nssv16736643;dbVar:nssv15135787;dbVar:nssv15121048;dbVar:nssv15132855\t1:47852-249228449;1:82155-249218992;1:849468-249224684;1:142535936-157648813;1:143500224-149763815;1:143544036-149754161;1:143753741-151399970;1:143932351-149801420;1:144927579-153223600;1:145425396-149091187;1:145425396-149699420;1:145425396-149768855;1:145451330-156102366;1:145764500-249233096;1:145818703-149378266;1:146500973-149433185;1:147400638-149813625;1:147411535-149699420\t0.07;0.07;0.07;1.11;2.67;2.69;2.19;2.85;2.02;1.34;3.92;3.85;1.57;0.16;4.70;5.71;6.94;7.31\t\t\tdbVar:nssv15132982;dbVar:nssv15133379;dbVar:nssv15137633;dbVar:nssv15137132;dbVar:nssv15136850;dbVar:nssv15132445;dbVar:nssv15137470;dbVar:nssv15135169;dbVar:nssv15129680;dbVar:nssv15157514;dbVar:nssv15133691;dbVar:nssv15132524;dbVar:nssv15137778\t1:143721527-149232481;1:145388356-149418924;1:145415157-149433207;1:145626238-149244468;1:145626238-149453964;1:145655993-149232481;1:145747243-149155026;1:145987157-149232481;1:146053395-249233096;1:146089269-149376652;1:146143190-149232481;1:146143190-149699420;1:146507650-149433207\t3.04;4.15;4.17;4.63;4.37;4.68;3.32;5.16;0.16;5.09;5.42;4.71;5.72\t\t\tDDD:2784;DDD:2806;TS40:ISCA-37469;dgv4e203;nsv514006\t1:147929337-149801433;1:148050780-149739249;1:148867552-149768855;1:149034710-149405578;1:149036513-149244464\t0.0800\tDDD:2784;DDD:2806;HI40:ISCA-37469;dgv375n100;dgv4e203;esv2422083;esv3894145\t1:147929337-149801433;1:148050780-149739249;1:148867552-149768855;1:149034710-149405578;1:149036513-149278459;1:149036525-149256691;1:149039121-149211496\t0.3041\t\t\t\tIMH\t1:4599855-170869838;1:17124869-234920285;1:17225077-149220997;1:17229845-149217063;1:69129973-188838391;1:76428346-179322403;1:108097960-232960701\t0.4999\t\t\t1:148050780-149739249 DDD:2784;1:149034710-149405578 DDD:2806;1:149071635-149169501 1000g;1:149151839-149203736 1000g;1:149207861-149218152 1000g;\t1:147929337-149801433 dgv4e203;1:148867552-149768855 TS40:ISCA-37469;1:149036513-149244464 nsv514006;1:149071635-149169501 esv3587467;1:149151839-149203736 esv3587470;1:149207861-149218152 esv3587472\t\t\t1:148050780-149739249 DDD:2784;1:149034710-149405578 DDD:2806;1:149035900-149053900 gnomAD-SV_v2.1_DEL_1_7834;1:149035900-149204000 gnomAD-SV_v2.1_DEL_1_7835;1:149036525-149256691 esv2422083;chr1:149046220-149046341 dbVar;1:149064634-149080509 gnomAD-SV_v2.1_DEL_1_7837;chr1:149071634-149169501 dbVar;1:149071635-149169501 esv3587466;chr1:149090849-149092378 dbVar;1:149090850-149092378 esv3587468;chr1:149132411-149132504 dbVar;chr1:149134000-149204000 dbVar;chr1:149139251-149139476 dbVar;chr1:149151838-149203736 dbVar;1:149151839-149203736 esv3587469;chr1:149156359-149156429 dbVar;chr1:149159117-149159254 dbVar;chr1:149173738-149173810 dbVar;1:149202746-149436842 DDD:2817...\t1:147929337-149801433 dgv4e203;1:148867552-149768855 HI40:ISCA-37469;chr1:149035900-149053900 dbVar;chr1:149035900-149204000 dbVar;1:149036513-149278459 dgv375n100;1:149039121-149211496 esv3894145;chr1:149064634-149080509 dbVar;chr1:149065069-149065232 dbVar;1:149071635-149169501 1000g;chr1:149077419-149077503 dbVar;1:149090850-149092378 1000g;chr1:149132411-149132463 dbVar;chr1:149133674-149133762 dbVar;1:149134000-149204000 gnomAD-SV_v2.1_DEL_1_7844;1:149145234-149244654 DDD:2814;1:149151839-149203736 1000g;1:149152065-149204067 HI40:ISCA-46570;chr1:149158275-149158337 dbVar;chr1:149162118-149162210 dbVar;chr1:149191596-149191654 dbVar...\t0.455\t0.440\t\t\t1:149209192-149209220\t(GA)n\t\t\t1:149035966-149106186\t1:149191324-149214601;1:149200001-149214601\t1:147832001-149058800\tHigh Signal Region\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t-1.0\t1A (cf Gene_count, RE_gene, +0.00);2F/4O (cf B_loss_source, -1.00);2B (cf po_P_loss_source, HI, OMIM_morbid, +0.00;3A (1 gene, +0.00);5F (+0.00)\t1\n1_149041934_149209289_DEL_1\t1\t149041934\t149209289\t-167356\tDEL\t\tBenign\tNA\tsplit\tq21.2\tRNVU1-17\t\t\t\tNR_104078\t1\t149194105\t149194269\t164\t0\t0\tNA\t1\ttxStart-txEnd\tUTR\t\t\t149194105\t149194269\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t1000g;DDD:2784;DDD:2806;TS40:ISCA-37469;dgv4e203;esv3587470;nsv514006\t1:147929337-149801433;1:148050780-149739249;1:148867552-149768855;1:149034710-149405578;1:149036513-149244464;1:149151839-149203736;1:149151839-149203736\t0.0800\t1000g;DDD:2784;DDD:2806;DDD:2814;HI40:ISCA-37469;HI40:ISCA-46570;dbVar;dgv375n100;dgv4e203;esv2422083;esv3587469;esv3894145;gnomAD-SV_v2.1_DEL_1_7835;gnomAD-SV_v2.1_DEL_1_7844\t1:147929337-149801433;1:148050780-149739249;1:148867552-149768855;1:149034710-149405578;chr1:149035900-149204000;1:149035900-149204000;1:149036513-149278459;1:149036525-149256691;1:149039121-149211496;chr1:149134000-149204000;1:149134000-149204000;1:149145234-149244654;chr1:149151838-149203736;1:149151839-149203736;1:149151839-149203736;1:149152065-149204067\t0.3041\t\t\t\tIMH\t1:4599855-170869838;1:17124869-234920285;1:17225077-149220997;1:17229845-149217063;1:69129973-188838391;1:76428346-179322403;1:108097960-232960701\t0.4999\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t101954269\tHGNC:48322\t\t\t\t\t\t\t\t\t\t\tfull=1\n1_248738899_248785562_DEL_1\t1\t248738899\t248785562\t-46664\tDEL\t\tBenign\tNA\tfull\tq44\tOR2T10\tOR2T34\tOR2T11\t1\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tdbVar:nssv15156967;dbVar:nssv15156970;dbVar:nssv15149867;nssv15151118;dbVar:nssv15127572;dbVar:nssv15777262;dbVar:nssv15151024;dbVar:nssv18326443;dbVar:nssv16207620;dbVar:nssv15146793;dbVar:nssv15147003;dbVar:nssv15146656;dbVar:nssv16215284;dbVar:nssv15145669;dbVar:nssv15154064;dbVar:nssv15146178;dbVar:nssv18329268;dbVar:nssv15147314;dbVar:nssv15147005;dbVar:nssv15146390;dbVar:nssv15150211;dbVar:nssv15147383;dbVar:nssv15146391;dbVar:nssv15126459;dbVar:nssv15146018;dbVar:nssv15156411;dbVar:nssv15147341;dbVar:nssv15149590;dbVar:nssv15170725;dbVar:nssv15149119;dbVar:nssv15774642;dbVar:nssv15776729;dbVar:nssv15145719;dbVar:nssv15142850;dbVar:nssv15140102;dbVar:nssv15119915;dbVar:nssv15135164;dbVar:nssv18330767;dbVar:nssv15142418;dbVar:nssv15133070;dbVar:nssv15128248;dbVar:nssv18326380\t1:47852-249228449;1:82155-249218992;1:849468-249224684;1:145764500-249233096;1:182388774-249111240;1:195483440-249213000;1:197867915-249224684;1:204045949-249218992;1:207519988-249224684;1:209819553-249225312;1:210136971-249212668;1:210152795-249218992;1:214197156-249212668;1:218252552-249224684;1:223521036-249212668;1:223972940-249224684;1:224002850-249212668;1:224016203-249185508;1:224075483-249185508;1:224105295-249224684;1:224210565-249212668;1:224284191-249212668;1:225049988-249233096;1:225626183-249060210;1:228529974-249181598;1:229158657-249212668;1:231670871-249213000;1:232232336-249218992;1:234050865-249213059;1:235582581-249224684;1:238669294-249224684;1:240407745-249185508;1:242324399-249224684;1:242656461-249213000;1:242992034-249185508;1:243095879-249158835;1:243258051-249224684;1:244197792-249224684;1:245476118-249212668;1:245665464-249233096;1:246850402-249205263\t0.02;0.02;0.02;0.05;0.07;0.09;0.09;0.10;0.11;0.12;0.12;0.12;0.13;0.15;0.18;0.18;0.19;0.19;0.19;0.19;0.19;0.19;0.19;0.20;0.23;0.23;0.27;0.27;0.31;0.34;0.44;0.53;0.68;0.71;0.75;0.77;0.78;0.93;1.25;1.31;1.98\t\t\tdbVar:nssv15129680;dbVar:nssv18326340;dbVar:nssv15149874;dbVar:nssv15148823;dbVar:nssv15148210;dbVar:nssv15148138;dbVar:nssv15148243;dbVar:nssv15146635;dbVar:nssv15146644;dbVar:nssv15146499;dbVar:nssv15146500;dbVar:nssv18330244;dbVar:nssv15145856;dbVar:nssv15153348;dbVar:nssv15146579;dbVar:nssv15131783;dbVar:nssv18329412;dbVar:nssv15138053;dbVar:nssv15124424;dbVar:nssv18841999;dbVar:nssv15126240;dbVar:nssv15133004;dbVar:nssv15771899;dbVar:nssv15133645;dbVar:nssv15153353;dbVar:nssv15605763;dbVar:nssv18792785;dbVar:nssv15772690;dbVar:nssv16255440\t1:146053395-249233096;1:233012995-249206918;1:235797385-249224684;1:236719383-249212668;1:237806582-249212668;1:238196876-249218733;1:238356181-249224684;1:238514422-249212668;1:238917050-249212666;1:239721731-249212668;1:239793169-249218792;1:239910961-249224684;1:240628423-249212668;1:241051171-249224684;1:241210723-249218792;1:241920552-249185508;1:242045198-249212668;1:242208582-249224684;1:243103402-249119318;1:243384761-249213309;1:243477621-249233096;1:243949932-249212668;1:244379482-249224684;1:244745426-249212668;1:244797640-249224684;1:245341154-249212429;1:245704070-249212562;1:246565045-249224684;1:246853200-249181899\t0.05;0.29;0.35;0.37;0.41;0.42;0.43;0.44;0.45;0.49;0.50;0.50;0.54;0.57;0.58;0.64;0.65;0.67;0.78;0.80;0.81;0.89;0.96;1.04;1.05;1.21;1.33;1.75;2.00\t\t\t\t\t\tDDD:4636;DDD:4639;HI40:ISCA-46339;dbVar;dgv166e212;dgv630n100;esv2760083;esv2763780;gnomAD-SV_v2.1_DEL_1_13889\t1:248605753-248818483;1:248683401-248814080;1:248688222-248828223;1:248693963-248856466;1:248727631-248859425;1:248731000-248798200;chr1:248731000-248798200;1:248731000-248798200;1:248737436-248818471\t0.2767\t\t\t\tIMH\t1:248596196-248822398;1:248601499-248817009;1:248601686-248817033;1:248602851-248816084;1:248606626-248811646;1:248609654-248808661\t0.4394\t\t\t\t1:248756742-248797597 1000g\t\t\t1:248605753-248818483 esv2760083;1:248688222-248828223 dgv166e212;1:248712455-248757403 HI40:ISCA-46337;1:248712455-248757403 gnomAD-SV_v2.1_DEL_1_13885;1:248729000-248743000 HI40:ISCA-46338;1:248729000-248743000 gnomAD-SV_v2.1_DEL_1_13888;chr1:248731000-248798200 dbVar;1:248737436-248818471 dgv630n100;chr1:248738000-248744000 dbVar;1:248739346-248798392 esv2660478;1:248739502-248798200 DDD:4645;chr1:248741000-248749000 dbVar;chr1:248742276-248742334 dbVar;1:248753185-248795277 dgv167e212;chr1:248755655-248758478 dbVar;1:248755656-248758478 HI40:ISCA-46577;1:248755670-248758483 DDD:4648;chr1:248756741-248797597 dbVar;1:248756742-248797597 esv3589559;\tchr1:248469040-248768529 dbVar;1:248683401-248814080 esv2763780;1:248693963-248856466 DDD:4636;chr1:248712455-248757403 dbVar;1:248727631-248859425 DDD:4639;chr1:248729000-248743000 dbVar;1:248731000-248798200 HI40:ISCA-46339;1:248731000-248798200 gnomAD-SV_v2.1_DEL_1_13889;1:248738000-248744000 HI40:ISCA-46340;1:248738000-248744000 gnomAD-SV_v2.1_DEL_1_13890;chr1:248739419-248739472 dbVar;1:248739517-248797213 esv2421359;1:248741000-248749000 gnomAD-SV_v2.1_DEL_1_13892;1:248749183-248797201 dgv633n100;1:248753986-248795457 nsv514048;1:248755656-248758478 1000g;1:248755656-248758478 esv3589558;chr1:248755674-248758483 dbVar;1:248756742-248797597 1000g;1:248756881-248797809 HI40:ISCA-46576\t0.305\t0.330\t\t\t\t\t\t\t1:248692097-248751707\t\t\t\t\t\t\t\t\t92.08\t\t\t\t0.553342166544692\t-0.565086620797697\t\t\t\t\t\t\t\t\t\t\t\t9\t6.5559e-04\t1.5575e-04\t-1.0\t1A (cf Gene_count, RE_gene, +0.00);2F/4O (cf B_loss_source, -1.00);2B (cf po_P_loss_source, HI, OMIM_morbid, +0.00;3A (1 gene, +0.00);5F (+0.00)\t1\n1_248738899_248785562_DEL_1\t1\t248738899\t248785562\t-46664\tDEL\t\tBenign\tNA\tsplit\tq44\tOR2T10\t\t\t\tNM_001004693\t2\t248753787\t248761001\t7214\t939\t97\tno\t2\ttxStart-txEnd\t5'UTR-3'UTR\t\t\t248753787\t248761001\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tDDD:4636;DDD:4639;DDD:4645;HI40:ISCA-46339;dbVar;dgv166e212;dgv167e212;dgv630n100;dgv633n100;esv2421359;esv2660478;esv2760083;esv2763780;gnomAD-SV_v2.1_DEL_1_13889\tchr1:248469040-248768529;1:248605753-248818483;1:248683401-248814080;1:248688222-248828223;1:248693963-248856466;1:248727631-248859425;1:248731000-248798200;chr1:248731000-248798200;1:248731000-248798200;1:248737436-248818471;1:248739346-248798392;1:248739502-248798200;1:248739517-248797213;1:248749183-248797201;1:248753185-248795277\t0.2767\t\t\t\tIMH\t1:248596196-248822398;1:248601499-248817009;1:248601686-248817033;1:248602851-248816084;1:248606626-248811646;1:248609654-248808661\t0.4394\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t92.08\t\t\t\t0.553342166544692\t-0.565086620797697\t\t\t\t\t127069\tHGNC:19573\t\t\t\t\t\t9\t6.5559e-04\t1.5575e-04\t\t\tfull=1\n10_46976158_47590995_DUP_1\t10\t46976158\t47590995\t614838\tDUP\t\tBenign\tNA\tfull\tq11.22\tGPRIN2;NPY4R;LINC00842;HNRNPA1P33;ANXA8L1;FAM25BP;AGAP14P;SHLD2P3;ANTXRLP1\tSYT15\tLOC105378577\t9\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tGDF2 (morbid/RE=ABC_enhancer)\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tdbVar:nssv15171419;dbVar:nssv15161644;dbVar:nssv15171420;dbVar:nssv15161671;dbVar:nssv15161670;nssv15161864;dbVar:nssv18830975;dbVar:nssv15148987;dbVar:nssv15146649;dbVar:nssv15148014;dbVar:nssv15147999;dbVar:nssv15127252;dbVar:nssv15149138;dbVar:nssv15160810;dbVar:nssv15153822;dbVar:nssv18329611;dbVar:nssv15157044;dbVar:nssv15774462\t10:73233-135524321;10:93298-135378918;10:98088-135477883;10:100027-50961640;10:100028-135427143;10:11138693-135427143;10:42607636-69160433;10:42890650-52636819;10:43180755-75475666;10:43379743-54025077;10:43957497-55681185;10:46242058-51595050;10:46591858-51028871;10:46966534-51822386;10:46966535-51903756;10:47049548-51903662;10:47148814-51626260\t0.45;0.45;0.45;1.21;0.45;0.49;2.32;6.31;1.90;5.78;5.24;11.49;13.86;12.66;12.45;11.15;9.88\t\t\tdbVar:nssv18830989;dbVar:nssv18792766;dbVar:nssv15148974;dbVar:nssv15147055;dbVar:nssv15147325;dbVar:nssv15149769;dbVar:nssv15153824;dbVar:nssv15775323;dbVar:nssv18330284;dbVar:nssv18842061;dbVar:nssv18326311;dbVar:nssv15152293;dbVar:nssv15147381;dbVar:nssv15149118;dbVar:nssv15148000;dbVar:nssv15148874;dbVar:nssv15605856;dbVar:nssv17976988;dbVar:nssv16252224;dbVar:nssv15153821;dbVar:nssv15155360;dbVar:nssv15153823;nssv15775280;dbVar:nssv15149894;dbVar:nssv18330270;dbVar:nssv15151095;dbVar:nssv15150620;dbVar:nssv16596271;dbVar:nssv16254627\t10:12829207-135427143;10:46200157-51028871;10:46205691-51330432;10:46205691-51911085;10:46205697-51724915;10:46224447-51594991;10:46225365-51874356;10:46235358-51874163;10:46269494-51874356;10:46284270-51870080;10:46287822-51627470;10:46287822-51861565;10:46476966-51724915;10:46491170-51081560;10:46491170-51594991;10:46491170-51664079;10:46544811-51743471;10:46576516-51680164;10:46964974-51826226;10:46966534-51700837;10:46966534-51874356;10:46966534-51903755;10:46966534-51903756;10:46966535-51700837;10:46966535-51822386;10:46966535-51903756;10:46966536-51874356;10:47132306-51627470\t0.50;12.73;12.00;10.78;11.14;11.45;10.88;10.90;10.97;11.01;11.51;11.03;11.72;13.39;12.05;11.89;11.83;12.05;12.65;12.99;12.53;12.45;12.45;12.99;12.66;12.45;12.53;10.20\t\t\tDDD:32922;dgv221e212;dgv24e55;nsv516485\t10:46109534-48312291;10:46416327-47756284;10:46943378-47742094;10:46966535-48298893\t0.1100\tDDD:32922;dgv23e55;nsv516485\t10:46109534-48312291;10:46416327-47756284;10:46943378-47742094\t0.0260\t\t\t\tIMH\t10:46257220-51811936\t0.0179\t\t\t10:46416327-47756284 DDD:32922;10:46931463-47389066 DDD:32936;10:46943378-47136996 dgv22e55;10:46966535-48298893 dgv221e212;10:46976293-47023561 1000g;10:46976293-47023561 dgv116e214;10:47007971-47086710 1000g;10:47007971-47086710 dgv117e214;10:47089973-47150813 1000g;10:47089973-47150813 dgv118e214;10:47321000-47396000 gnomAD-SV_v2.1_DUP_10_29724;10:47383858-47395064 1000g;10:47383858-47395064 dgv119e214;10:47394950-47400600 gnomAD-SV_v2.1_DUP_10_29727;10:47424000-47429050 gnomAD-SV_v2.1_DUP_10_29730;10:47531023-47599037 1000g;10:47531764-47597768 TS40:ISCA-46639;10:47537369-47652803 esv2421526;10:47543323-47703613 dgv85n27;10:47565000-47570000 gnomAD-SV_v2.1_DUP_10_29733...\t10:46109534-48312291 nsv516485;10:46923704-47138897 DDD:32934;10:46931470-47201116 DDD:32937;10:46943378-47742094 dgv24e55;10:46976293-47023561 1000g;10:46976293-47023561 1000g;10:47007971-47086710 1000g;10:47007971-47086710 1000g;10:47089973-47150813 1000g;10:47089973-47150813 1000g;10:47150450-47160300 gnomAD-SV_v2.1_DUP_10_29721;10:47370500-47380000 gnomAD-SV_v2.1_DUP_10_29725;10:47383858-47395064 1000g;10:47389000-47395000 gnomAD-SV_v2.1_DUP_10_29726;10:47412000-47429100 gnomAD-SV_v2.1_DUP_10_29729;10:47530000-47578125 gnomAD-SV_v2.1_DUP_10_29731;10:47531023-47599037 dgv120e214;10:47534700-47555100 gnomAD-SV_v2.1_DUP_10_29732;10:47539193-47885867 DDD:32970;10:47545737-47759694 DDD:32972...\t\t\t10:46416327-47756284 DDD:32922;10:46943378-47742094 dgv23e55;chr10:47009185-47009299 dbVar;10:47036095-47036306 IMH;chr10:47083158-47083218 dbVar;10:47083161-47083233 gnomAD-SV_v2.1_DEL_10_109994;chr10:47088385-47088703 dbVar;chr10:47120109-47120186 dbVar;chr10:47148773-47150391 dbVar;10:47148774-47150391 esv3623121;10:47172000-47177000 HI40:ISCA-46432;10:47177700-47182800 HI40:ISCA-46433;10:47191200-47201400 HI40:ISCA-46434;10:47211300-47216400 HI40:ISCA-46435;chr10:47241600-47251000 dbVar;10:47252000-47271150 gnomAD-SV_v2.1_DEL_10_110003;10:47275450-47281000 gnomAD-SV_v2.1_DEL_10_110005;10:47301450-47315100 gnomAD-SV_v2.1_DEL_10_110006;chr10:47531022-47599037 dbVar;10:47531023-47599037 esv3623125...\t10:46109534-48312291 nsv516485;10:46931470-47201116 DDD:32937;chr10:47003380-47003486 dbVar;10:47009185-47009299 gnomAD-SV_v2.1_DEL_10_109993;10:47036095-47036306 esv2665191;chr10:47083161-47083233 dbVar;chr10:47088375-47088703 dbVar;10:47088385-47088703 gnomAD-SV_v2.1_DEL_10_109995;chr10:47141536-47141802 dbVar;10:47148774-47150391 1000g;10:47150446-47326492 esv2663732;chr10:47172000-47177000 dbVar;chr10:47177700-47182800 dbVar;chr10:47191200-47201400 dbVar;chr10:47211300-47216400 dbVar;chr10:47252000-47271150 dbVar;chr10:47275450-47281000 dbVar;chr10:47301450-47315100 dbVar;chr10:47383857-47395064 dbVar;10:47531023-47599037 1000g...\t0.415\t0.500\t10:46976181-46976437\tLTR78\t\t\t\t\t\t10:47590101-47594293;10:47590101-47594293\t\t\t\t\t\t\t\t89.5\t\t\t\t-2.98697085794417\t-2.90416172871297\t\t\t\t\t\t\t\t\t\t\t\t8\t3.3439e-01\t2.9629e-04\t-1.0\t1A (cf Gene_count, RE_gene, +0.00);2D (cf B_gain_source, -1.00);2B (cf po_P_gain_source, TS, OMIM_morbid, +0.00);2E (cf B_gain_source, +0.00);2L (ANTXRLP1, +0.00);3A (9 genes, +0.00);4O (cf po_B_gain_AllG_source, B_gain_source, po_B_gain_SomeG_source, +0.00);5F (+0.00)\t1\n10_46976158_47590995_DUP_1\t10\t46976158\t47590995\t614838\tDUP\t\tBenign\tNA\tsplit\tq11.22\tGPRIN2\t\t\t\tNM_001385287\t1\t46992020\t47007881\t15861\t1449\t100\tno\t4\ttxStart-txEnd\t5'UTR-3'UTR\t\t\t46992020\t47007881\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t1000g;DDD:32922;DDD:32934;DDD:32936;DDD:32937;dgv116e214;dgv221e212;dgv22e55;dgv24e55;nsv516485\t10:46109534-48312291;10:46416327-47756284;10:46923704-47138897;10:46931463-47389066;10:46931470-47201116;10:46943378-47136996;10:46943378-47742094;10:46966535-48298893;10:46976293-47023561;10:46976293-47023561;10:46976293-47023561;10:46976293-47023561\t0.9544\tDDD:32922;DDD:32937;dgv23e55;nsv516485\t10:46109534-48312291;10:46416327-47756284;10:46931470-47201116;10:46943378-47742094\t0.0260\t\t\t\tIMH\t10:46257220-51811936\t0.0179\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t82.54\t\t\t\t-3.10473776124822\t-3.32991530871711\t\t\t\t\t9721\tHGNC:23730\t\t\t\t\t\t8\t3.8557e-06\t2.9629e-04\t\t\tfull=1\n10_46976158_47590995_DUP_1\t10\t46976158\t47590995\t614838\tDUP\t\tBenign\tNA\tsplit\tq11.22\tNPY4R\t\t\t\tNM_001278794\t2\t47083456\t47088320\t4864\t1128\t73\tno\t2\ttxStart-txEnd\t5'UTR-3'UTR\t\t\t47083456\t47088320\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tDDD:32922;DDD:32934;DDD:32936;DDD:32937;dgv221e212;dgv22e55;dgv24e55;nsv516485\t10:46109534-48312291;10:46416327-47756284;10:46923704-47138897;10:46931463-47389066;10:46931470-47201116;10:46943378-47136996;10:46943378-47742094;10:46966535-48298893\t0.1100\tDDD:32922;DDD:32937;dgv23e55;nsv516485\t10:46109534-48312291;10:46416327-47756284;10:46931470-47201116;10:46943378-47742094\t0.0260\t\t\t\tIMH\t10:46257220-51811936\t0.0179\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t66.73\t\t\t\t-2.98697085794417\t-2.90416172871297\t\t\t\t\t5540\tHGNC:9329\t\t\t\t\t\t8\t8.2144e-07\t6.1160e-09\t\t\tfull=1\n10_46976158_47590995_DUP_1\t10\t46976158\t47590995\t614838\tDUP\t\tBenign\tNA\tsplit\tq11.22\tLINC00842\t\t\t\tNR_033957\t2\t47096453\t47151400\t54947\t0\t0\tNA\t4\ttxStart-txEnd\tUTR\t\t\t47096453\t47151400\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tDDD:32922;DDD:32936;DDD:32937;dgv221e212;dgv24e55;nsv516485\t10:46109534-48312291;10:46416327-47756284;10:46931463-47389066;10:46931470-47201116;10:46943378-47742094;10:46966535-48298893\t0.1100\tDDD:32922;DDD:32937;dgv23e55;nsv516485\t10:46109534-48312291;10:46416327-47756284;10:46931470-47201116;10:46943378-47742094\t0.0260\t\t\t\tIMH\t10:46257220-51811936\t0.0179\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t643650\tHGNC:44989\t\t\t\t\t\t\t\t\t\t\tfull=1\n10_46976158_47590995_DUP_1\t10\t46976158\t47590995\t614838\tDUP\t\tBenign\tNA\tsplit\tq11.22\tHNRNPA1P33\t\t\t\tNR_003277\t2\t47133334\t47133898\t564\t0\t0\tNA\t1\ttxStart-txEnd\tUTR\t\t\t47133334\t47133898\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t1000g;DDD:32922;DDD:32934;DDD:32936;DDD:32937;dgv118e214;dgv221e212;dgv22e55;dgv24e55;nsv516485\t10:46109534-48312291;10:46416327-47756284;10:46923704-47138897;10:46931463-47389066;10:46931470-47201116;10:46943378-47136996;10:46943378-47742094;10:46966535-48298893;10:47089973-47150813;10:47089973-47150813;10:47089973-47150813;10:47089973-47150813\t0.9544\tDDD:32922;DDD:32937;dgv23e55;nsv516485\t10:46109534-48312291;10:46416327-47756284;10:46931470-47201116;10:46943378-47742094\t0.0260\t\t\t\tIMH\t10:46257220-51811936\t0.0179\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t728643\tHGNC:44990\t\t\t\t\t\t\t\t\t\t\tfull=1\n10_46976158_47590995_DUP_1\t10\t46976158\t47590995\t614838\tDUP\t\tBenign\tNA\tsplit\tq11.22\tANXA8L1\t\t\t\tNM_001098845\t3\t47157988\t47173994\t16006\t984\t100\tno\t12\ttxStart-txEnd\t5'UTR-3'UTR\t\t\t47157988\t47173994\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tDDD:32922;DDD:32936;DDD:32937;dgv221e212;dgv24e55;nsv516485\t10:46109534-48312291;10:46416327-47756284;10:46931463-47389066;10:46931470-47201116;10:46943378-47742094;10:46966535-48298893\t0.1100\tDDD:32922;DDD:32937;dgv23e55;esv2663732;nsv516485\t10:46109534-48312291;10:46416327-47756284;10:46931470-47201116;10:46943378-47742094;10:47150446-47326492\t0.0400\t\t\t\tIMH\t10:46257220-51811936\t0.0179\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t75.66\t\t\t\t\t\t\t\t\t\t728113\tHGNC:23334\t\t\t\t\t\t9\t3.3439e-01\t\t\t\tfull=1\n10_46976158_47590995_DUP_1\t10\t46976158\t47590995\t614838\tDUP\t\tBenign\tNA\tsplit\tq11.22\tFAM25BP\t\t\t\tNR_104039\t1\t47177206\t47181688\t4482\t0\t0\tNA\t3\ttxStart-txEnd\tUTR\t\t\t47177206\t47181688\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tDDD:32922;DDD:32936;DDD:32937;dgv221e212;dgv24e55;nsv516485\t10:46109534-48312291;10:46416327-47756284;10:46931463-47389066;10:46931470-47201116;10:46943378-47742094;10:46966535-48298893\t0.1100\tDDD:32922;DDD:32937;dgv23e55;esv2663732;nsv516485\t10:46109534-48312291;10:46416327-47756284;10:46931470-47201116;10:46943378-47742094;10:47150446-47326492\t0.0400\t\t\t\tIMH\t10:46257220-51811936\t0.0179\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t89.5\t\t\t\t\t\t\t\t\t\t100132929\tHGNC:23584\t\t\t\t\t\t\t\t\t\t\tfull=1\n10_46976158_47590995_DUP_1\t10\t46976158\t47590995\t614838\tDUP\t\tBenign\tNA\tsplit\tq11.22\tAGAP14P\t\t\t\tNR_165820\t1\t47192907\t47213477\t20570\t0\t0\tNA\t8\ttxStart-txEnd\tUTR\t\t\t47192907\t47213477\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tDDD:32922;DDD:32936;dgv221e212;dgv24e55;nsv516485\t10:46109534-48312291;10:46416327-47756284;10:46931463-47389066;10:46943378-47742094;10:46966535-48298893\t0.1100\tDDD:32922;dgv23e55;esv2663732;nsv516485\t10:46109534-48312291;10:46416327-47756284;10:46943378-47742094;10:47150446-47326492\t0.0400\t\t\t\tIMH\t10:46257220-51811936\t0.0179\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t653259\tHGNC:23660\t\t\t\t\t\t\t\t\t\t\tfull=1\n10_46976158_47590995_DUP_1\t10\t46976158\t47590995\t614838\tDUP\t\tBenign\tNA\tsplit\tq11.22\tSHLD2P3\t\t\t\tNR_027634\t1\t47379719\t47421238\t41519\t0\t0\tNA\t7\ttxStart-txEnd\tUTR\t\t\t47379719\t47421238\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tDDD:32922;dgv221e212;dgv24e55;nsv516485\t10:46109534-48312291;10:46416327-47756284;10:46943378-47742094;10:46966535-48298893\t0.1100\tDDD:32922;dgv23e55;nsv516485\t10:46109534-48312291;10:46416327-47756284;10:46943378-47742094\t0.0260\t\t\t\tIMH\t10:46257220-51811936\t0.0179\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t439965\tHGNC:34038\t\t\t\t\t\t\t\t\t\t\tfull=1\n10_46976158_47590995_DUP_1\t10\t46976158\t47590995\t614838\tDUP\t\tBenign\tNA\tsplit\tq11.22\tANTXRLP1\t\t\t\tNR_103827\t1\t47590260\t47640844\t735\t0\t0\tNA\t5\tintron4-txEnd\tUTR\t53\t3'\t47590260\t47590995\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t1000g;DDD:32922;DDD:32970;DDD:32972;TS40:ISCA-46639;dgv120e214;dgv221e212;dgv24e55;dgv85n27;esv2421526;gnomAD-SV_v2.1_DUP_10_29734;nsv516485\t10:46109534-48312291;10:46416327-47756284;10:46943378-47742094;10:46966535-48298893;10:47531023-47599037;10:47531023-47599037;10:47531764-47597768;10:47537369-47652803;10:47539193-47885867;10:47543323-47703613;10:47545737-47759694;10:47585775-47727500\t0.1100\t1000g;DDD:32922;dbVar;dgv23e55;esv2421526;esv3623125;gnomAD-SV_v2.1_DEL_10_110010;nsv516485\t10:46109534-48312291;10:46416327-47756284;10:46943378-47742094;chr10:47531022-47599037;10:47531023-47599037;10:47531023-47599037;10:47537369-47652803;chr10:47582000-47654100;10:47582000-47654100;chr10:47585000-47706000\t0.0318\t\t\t\tIMH\t10:46257220-51811936\t0.0179\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t100996567\tHGNC:45004\t\t\t\t\t\t\t\t\t\t\tfull=1\n14_22323880_22952279_DEL_1\t14\t22323880\t22952279\t-628400\tDEL\t\tBenign\tNA\tfull\tq11.2\tTRD-AS1\tOR4E1\tLINC02332\t1\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tCHD8 (HI=3/morbid/RE=GH_enhancer+GH_promoter_enhancer);MMP14 (morbid/RE=ABC_enhancer+EA_enhancer+GH_enhancer+GH_promoter_enhancer);PABPN1 (morbid/RE=GH_enhancer+GH_promoter_enhancer);SLC7A7 (morbid/RE=ABC_enhancer+EA_enhancer+GH_enhancer+GH_promoter_enhancer);SUPT16H (morbid/RE=GH_enhancer+GH_promoter_enhancer)\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tdbVar:nssv15162475;dbVar:nssv15606090;dbVar:nssv15161908;dbVar:nssv15162476;dbVar:nssv15161629;dbVar:nssv15139565;dbVar:nssv15141262;dbVar:nssv15146564;dbVar:nssv15146758;dbVar:nssv16207193;dbVar:nssv17976958;dbVar:nssv15148269;dbVar:nssv15161107;nssv15161424;dbVar:nssv15161067;dbVar:nssv15132618;dbVar:nssv15134537;dbVar:nssv17955846;dbVar:nssv16091748\t14:19000423-107289053;14:19100683-28730087;14:19280734-107287663;14:19327824-107287663;14:19794562-107234280;14:19794562-27768254;14:19794562-34049214;14:20468771-39453619;14:20490853-44562875;14:20511673-44829030;14:20511673-47481203;14:20511673-49111245;14:20511674-107285437;14:20619309-107263478;14:20619309-23911404;14:20880747-25487326;14:20925966-23649548;14:21717094-24027220\t0.71;6.53;0.71;0.71;0.72;7.88;4.41;3.31;2.61;2.58;2.33;2.20;0.72;0.73;19.09;13.64;23.07;27.20\t\t\tdbVar:nssv15119819;dbVar:nssv15145699;dbVar:nssv18330314;dbVar:nssv16208379;dbVar:nssv17976070\t14:20223409-23210490;14:20665105-45754005;14:20690197-23114522;14:21143934-23297667;14:21162264-50713602\t21.04;2.50;25.92;29.18;2.13\t\t\tTS40:ISCA-37476\t14:22111110-23021097\t\tHI40:ISCA-37476\t14:22111110-23021097\t\t\t\t\t\t\t\t\t\t14:22420175-22995788 dgv594e212;14:22824113-22824253 IMH\t14:22111110-23021097 TS40:ISCA-37476;14:22558879-22977816 dgv598e212\t\t\tchr14:22203999-22380000 dbVar;chr14:22377253-22379001 dbVar;chr14:22386251-22387140 dbVar;chr14:22401118-22401214 dbVar;chr14:22451362-22451480 dbVar;14:22506096-22519924 dgv596e212;chr14:22522033-22522131 dbVar;chr14:22557093-22558668 dbVar;chr14:22566919-22569163 dbVar;chr14:22578988-22580660 dbVar;chr14:22582707-22583756 dbVar;14:22582708-22583756 DDD:42194;14:22582708-22583756 esv2663069;chr14:22592792-22593350 dbVar;chr14:22621082-22623586 dbVar;chr14:22650745-22651552 dbVar;chr14:22690248-22693574 dbVar;14:22740309-22923239 esv3633740;chr14:22753195-22755692 dbVar;chr14:22763326-22765409 dbVar...\t14:22111110-23021097 HI40:ISCA-37476;chr14:22375089-22375885 dbVar;chr14:22381501-22381559 dbVar;chr14:22392130-22392542 dbVar;chr14:22414330-22458520 dbVar;chr14:22501037-22503623 dbVar;chr14:22520154-22520348 dbVar;14:22549070-22959340 DDD:42190;14:22558879-22995788 dgv599e212;chr14:22570896-22575554 dbVar;chr14:22582165-22583029 dbVar;14:22582707-22583756 gnomAD-SV_v2.1_DEL_14_140471;14:22582708-22583756 IMH;14:22582714-22583762 esv3633739;chr14:22602805-22607184 dbVar;chr14:22629626-22629708 dbVar;chr14:22667031-22667110 dbVar;chr14:22731881-22732433 dbVar;chr14:22740393-22749648 dbVar;chr14:22760947-22761344 dbVar...\t0.250\t0.390\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t-1.0\t1A (cf Gene_count, RE_gene, +0.00);2F/4O (cf B_loss_source, -1.00);2B (cf po_P_loss_source, HI, OMIM_morbid, +0.00;3A (1 gene, +0.00);5F (+0.00)\t1\n14_22323880_22952279_DEL_1\t14\t22323880\t22952279\t-628400\tDEL\t\tBenign\tNA\tsplit\tq11.2\tTRD-AS1\t\t\t\tNR_148361\t1\t22847807\t22951948\t104141\t0\t0\tNA\t5\ttxStart-txEnd\tUTR\t\t\t22847807\t22951948\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tTS40:ISCA-37476;dgv594e212;dgv598e212\t14:22111110-23021097;14:22420175-22995788;14:22558879-22977816\t0.0200\tDDD:42190;HI40:ISCA-37476;dgv599e212\t14:22111110-23021097;14:22549070-22959340;14:22558879-22995788\t0.0107\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t105370401\tHGNC:56197\t\t\t\t\t\t\t\t\t\t\tfull=1\n14_74001652_74022324_DEL_1\t14\t74001652\t74022324\t-20673\tDEL\t\tBenign\tNA\tfull\tq24.3\tHEATR4;ACOT1\tRIOX1\tACOT2\t2\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tCOQ6 (morbid/RE=EA_enhancer);ISCA2 (morbid/RE=GH_enhancer);PSEN1 (morbid/RE=EA_enhancer)\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tdbVar:nssv15162475;dbVar:nssv15161908;dbVar:nssv15162476;dbVar:nssv15161629;dbVar:nssv15161107;nssv15161424;dbVar:nssv15161067;dbVar:nssv17976728;dbVar:nssv17517489;dbVar:nssv15161689\t14:19000423-107289053;14:19280734-107287663;14:19327824-107287663;14:19794562-107234280;14:20511674-107285437;14:20619309-107263478;14:37671059-106985955;14:54654002-75828024;14:73750742-107285437\t0.02;0.02;0.02;0.02;0.02;0.02;0.03;0.10;0.06\t\t\tdbVar:nssv15161064;dbVar:nssv8639619;dbVar:nssv15161370\t14:70028817-82441728;14:73152116-77698582;14:73809922-79301402\t0.17;0.45;0.38\t\t\tDDD:43163;dgv655e212;dgv657e212\t14:73995762-74031034;14:73998504-74050492;14:74001111-74024031\t0.1799\t1000g;DDD:43161;DDD:43163;dbVar;dgv401e199;dgv654e212;esv2421969;esv3634909\t14:73995762-74031034;14:73996446-74025592;14:73997052-74024450;chr14:73997195-74024603;14:73997196-74024603;14:73997196-74024603;14:73998504-74050492;14:73998977-74028117\t0.8135\t\t\t\tIMH\t14:34547844-76392174\t0.0264\t\t\t14:73998504-74050492 DDD:43163;14:74001655-74002844 DDD:43168;14:74007603-74039880 IMH;14:74007864-74040335 IMH;14:74008288-74008463 nsv514748;14:74011084-74024007 1000g;14:74011084-74024007 dgv407e214;\t14:73995762-74031034 dgv655e212;14:74001111-74024031 dgv657e212;14:74001655-74004589 DDD:43169;14:74007816-74040003 IMH;14:74007919-74039902 gnomAD-SV_v2.1_DUP_14_38740;14:74010621-74023183 DDD:43174;14:74011084-74024007 1000g;14:74020544-74030798 DDD:43176\t\t\t14:73996446-74025592 dgv401e199;chr14:73997195-74024603 dbVar;14:73997196-74024603 esv3634909;14:73998977-74028117 esv2421969;14:74002704-74003063 nsv514747;14:74006839-74031034 dgv661e212;14:74010064-74012567 nsv514749;14:74011084-74024007 1000g;chr14:74019700-74051250 dbVar;\t14:73995762-74031034 dgv654e212;14:73997052-74024450 DDD:43161;14:73997196-74024603 1000g;14:73998504-74050492 DDD:43163;14:74001124-74020979 DDD:43165;14:74006839-74024031 dgv660e212;14:74006971-74038879 esv2672436;chr14:74011083-74024007 dbVar;14:74011084-74024007 esv3634910;14:74022142-74045835 DDD:43178\t0.420\t0.380\t14:74001513-74001649;14:74001714-74002042\tFLAM_A;L1ME4a\t14:74021756-74022225\tL1M1\t\t\t14:74000099-74020296\t\t\t\t\t\t\t\t\t85.75\t\t\t\t2.96959666946894\t4.05533207481267\t\t\t\t\t\t\t\t\t\t\t\t6\t6.4141e-05\t3.5999e-02\t-1.0\t1A (cf Gene_count, RE_gene, +0.00);2F/4O (cf B_loss_source, -1.00);2B (cf po_P_loss_source, HI, OMIM_morbid, +0.00;3A (2 genes, +0.00);5F (+0.00)\t1\n14_74001652_74022324_DEL_1\t14\t74001652\t74022324\t-20673\tDEL\t\tBenign\tNA\tsplit\tq24.3\tHEATR4\t\t\t\tNM_001220484\t1\t73945188\t74025651\t20673\t0\t0\tNA\t18\tintron1-intron1\t5'UTR\t3130\t5'\t74001651\t74022324\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tDDD:43163;dgv655e212;dgv657e212\t14:73995762-74031034;14:73998504-74050492;14:74001111-74024031\t0.1799\t1000g;DDD:43161;DDD:43163;dbVar;dgv401e199;dgv654e212;esv2421969;esv3634909\t14:73995762-74031034;14:73996446-74025592;14:73997052-74024450;chr14:73997195-74024603;14:73997196-74024603;14:73997196-74024603;14:73998504-74050492;14:73998977-74028117\t0.8135\t\t\t\tIMH\t14:34547844-76392174\t0.0264\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t85.75\t\t\t\t-0.328810289068687\t-0.503765753071617\t\t\t\t\t399671\tHGNC:16761\t\t\t\t\t\t6\t1.3711e-29\t6.2323e-17\t\t\tfull=1\n14_74001652_74022324_DEL_1\t14\t74001652\t74022324\t-20673\tDEL\t\tBenign\tNA\tsplit\tq24.3\tACOT1\t\t\t\tNM_001037161\t2\t74003846\t74010500\t6654\t1266\t100\tno\t3\ttxStart-txEnd\t5'UTR-3'UTR\t\t\t74003846\t74010500\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tDDD:43163;dgv655e212;dgv657e212\t14:73995762-74031034;14:73998504-74050492;14:74001111-74024031\t0.1799\t1000g;DDD:43161;DDD:43163;DDD:43165;dbVar;dgv401e199;dgv654e212;esv2421969;esv3634909\t14:73995762-74031034;14:73996446-74025592;14:73997052-74024450;chr14:73997195-74024603;14:73997196-74024603;14:73997196-74024603;14:73998504-74050492;14:73998977-74028117;14:74001124-74020979\t0.8135\t\t\t\tIMH\t14:34547844-76392174\t0.0264\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t79.11\t\t\t\t2.96959666946894\t4.05533207481267\t\t\t\t\t641371\tHGNC:33128\t\t\t\t\t\t8\t6.4141e-05\t3.5999e-02\t\t\tfull=1\n15_20432852_22765687_DUP_1\t15\t20432852\t22765687\t2332836\tDUP\t\tBenign\tNA\tfull\tq11.1-q11.2\tCHEK2P2;HERC2P3;GOLGA6L6;GOLGA8CP;NBEAP1;MIR3118-2;POTEB2;MIR5701-1;LINC01193;FAM30C;LOC646214;CXADRP2;POTEB;NF1P2;LINC02203;OR4M2-OT1;OR4M2;OR4N4;OR4N3P;IGHV1OR15-1;IGHV1OR15-3;MIR1268A;REREP3;MIR4509-1;GOLGA8DP;GOLGA6L1\t\tTUBGCP5\t26\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tADAM22 (morbid/RE=mTL_miRNA);AGO2 (morbid/RE=mTL_miRNA);AIP (morbid/RE=mTL_miRNA);BLOC1S3 (morbid/RE=mTL_miRNA);CA12 (morbid/RE=mTL_miRNA);CACNA1H (morbid/RE=mTL_miRNA);CAMK2G (morbid/RE=mTL_miRNA);CDKN1B (HI=3/morbid/RE=mTL_miRNA);CERS1 (morbid/RE=mTL_miRNA);DHCR7 (morbid/RE=mTL_miRNA);DICER1 (HI=3/morbid/RE=mTL_miRNA);EDAR (morbid/RE=mTL_miRNA);EGLN1 (morbid/RE=mTL_miRNA);EPB41 (morbid/RE=mTL_miRNA);EPHA2 (morbid/RE=mTL_miRNA);ERBB3 (morbid/RE=mTL_miRNA);FRMPD4 (morbid/RE=mTL_miRNA);GABRB2 (morbid/RE=mTL_miRNA);GATA6 (HI=3/morbid/RE=mTL_miRNA);GCK (morbid/RE=mTL_miRNA);HPRT1 (HI=3/morbid/RE=mTL_miRNA);HRAS (morbid/RE=mTL_miRNA);HSPD1 (morbid/RE=mTL_miRNA);IL6ST (morbid/RE=mTL_miRNA);INF2 (morbid/RE=mTL_miRNA);ISCU (morbid/RE=mTL_miRNA);KAT6B (HI=3/morbid/RE=mTL_miRNA);KCNJ10 (morbid/RE=mTL_miRNA);KIF23 (morbid/RE=mTL_miRNA);KLHL3 (morbid/RE=mTL_miRNA);KMT2D (HI=3/morbid/RE=mTL_miRNA);LRIG2 (morbid/RE=mTL_miRNA);MAGEL2 (morbid/RE=ABC_enhancer);MAPK1 (morbid/RE=mTL_miRNA);MAPKAPK5 (morbid/RE=mTL_miRNA);MKRN3 (morbid/RE=ABC_enhancer);NDUFS1 (morbid/RE=mTL_miRNA);NEK9 (morbid/RE=mTL_miRNA);NIPA1 (morbid/RE=ABC_enhancer);NPM1 (morbid/RE=mTL_miRNA);ORAI1 (morbid/RE=mTL_miRNA);PEX26 (morbid/RE=mTL_miRNA);PHF12 (HI=3/RE=mTL_miRNA);PIGP (morbid/RE=mTL_miRNA);POT1 (morbid/RE=mTL_miRNA);PRKCA (morbid/RE=mTL_miRNA);PRLR (morbid/RE=mTL_miRNA);PURA (HI=3/morbid/RE=mTL_miRNA);RAC3 (morbid/RE=mTL_miRNA);SCN1A (HI=3/morbid/RE=mTL_miRNA)...\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tdbVar:nssv15172447;dbVar:nssv15149081;dbVar:nssv15148902;dbVar:nssv15125410;dbVar:nssv15127689;dbVar:nssv15127462;dbVar:nssv15126524;dbVar:nssv15124656;dbVar:nssv15127659;dbVar:nssv15126021;dbVar:nssv15172190;dbVar:nssv15150569;dbVar:nssv15147052;dbVar:nssv15145742;dbVar:nssv15147053;dbVar:nssv15175556;dbVar:nssv15145744;dbVar:nssv15774514;dbVar:nssv15148785;dbVar:nssv15605894;dbVar:nssv15149135;dbVar:nssv15148575;dbVar:nssv15147687;dbVar:nssv15605895;dbVar:nssv15147058;dbVar:nssv15145747;dbVar:nssv15146452;dbVar:nssv15149084;dbVar:nssv15147355;dbVar:nssv15149616;dbVar:nssv15147801;dbVar:nssv15146958;dbVar:nssv15149124;dbVar:nssv15123304;dbVar:nssv15147513;dbVar:nssv15127079;dbVar:nssv15605897;dbVar:nssv15605899;dbVar:nssv15125414;dbVar:nssv15148135;dbVar:nssv15146406;dbVar:nssv15148053;dbVar:nssv15145661;nssv15146195;dbVar:nssv15145807;dbVar:nssv15147309;dbVar:nssv15145805;nssv15146672;dbVar:nssv15145677;dbVar:nssv18841879;dbVar:nssv16207640;dbVar:nssv16215281;dbVar:nssv15755702;dbVar:nssv15145809;nssv15150756;dbVar:nssv15145849;dbVar:nssv15146718;dbVar:nssv15148834;dbVar:nssv15147450;nssv15148847;dbVar:nssv15146035;dbVar:nssv15148907;dbVar:nssv15146735;dbVar:nssv15148824;dbVar:nssv15146042;dbVar:nssv15147411;dbVar:nssv15147985;dbVar:nssv15148007;dbVar:nssv15146680;dbVar:nssv15147424;dbVar:nssv15148131;dbVar:nssv15145909\t15:20016812-102493540;15:20044343-28924405;15:20045835-32914140;15:20063341-102521392;15:20063341-29093456;15:20063341-29209620;15:20063341-30448351;15:20063341-32439302;15:20063341-32942613;15:20063341-32986584;15:20071674-102461162;15:20071674-30737344;15:20085003-28947309;15:20085003-29210720;15:20085004-28178425;15:20102541-29031690;15:20110723-28408897;15:20179528-32998070;15:20190549-28406650;15:20190549-30300265;15:20190549-32386089;15:20190549-32917801;15:20190549-32917857;15:20191653-28525310;15:20207714-30641396;15:20207714-32413623;15:20251769-28631040;15:20306550-26208861;15:20686197-30509384;15:20733396-102511616;15:20733396-28406650;15:20733396-28406709;15:20848461-27662530;15:21129985-28535266;15:22304597-28577787;15:22318645-29209620;15:22382861-32396457;15:22383300-32917689;15:22409402-28952953;15:22652061-28883749;15:22669053-28435888;15:22698523-28940098;15:22698523-29030517;15:22698523-29085896;15:22698523-30366124;15:22698523-30653936;15:22698523-32899558;15:22742397-28567325;15:22750306-23114374;15:22750306-23164315;15:22750306-23226254;15:22765629-28520313;15:22765629-28557186;15:22765629-28559402;15:22765629-28912057;15:22765629-29006852;15:22765629-29085896;15:22765629-29096442;15:22765629-30366124;15:22765629-30653936;15:22765629-30819509;15:22765629-38837526;15:22765638-28520316;15:22765638-29085888;15:22765638-30366079;15:22765638-31467435;15:22765638-32509932;15:22765638-32899558\t2.83;26.27;18.13;2.83;25.83;25.51;22.46;18.85;18.11;18.05;2.83;21.87;26.32;25.56;28.82;26.13;28.11;18.20;28.39;23.08;19.13;18.33;18.33;27.99;22.36;19.11;27.84;39.52;21.17;2.49;26.49;26.49;28.14;22.09;7.35;6.49;3.82;3.63;5.44;1.82;1.68;1.08;1.06;1.05;0.88;0.84;0.66;0.40;4.23;3.72;3.23;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00\t\t\tdbVar:nssv16865885;dbVar:nssv18326337;dbVar:nssv15605896;dbVar:nssv15123310;dbVar:nssv18841918;dbVar:nssv16208656;dbVar:nssv18792791;dbVar:nssv16215320;dbVar:nssv15147060;dbVar:nssv15146946;dbVar:nssv15147062;dbVar:nssv15153078;dbVar:nssv18792767;dbVar:nssv15160814;dbVar:nssv15160813;dbVar:nssv15159751;dbVar:nssv15160812;dbVar:nssv16216734;dbVar:nssv16297059;dbVar:nssv15147987;dbVar:nssv16215225;dbVar:nssv16208660;dbVar:nssv15160288;dbVar:nssv15146407;dbVar:nssv15145750;dbVar:nssv16297060;dbVar:nssv15149692;dbVar:nssv15147712;dbVar:nssv15145753;dbVar:nssv15147316;dbVar:nssv15145752;nssv15148282;dbVar:nssv15146196;nssv15146797;dbVar:nssv15146673;dbVar:nssv15147319;dbVar:nssv18326338;dbVar:nssv17955873;dbVar:nssv18842037;dbVar:nssv15145025;dbVar:nssv15145441;dbVar:nssv15145201;dbVar:nssv17517455;dbVar:nssv16297061;dbVar:nssv16208668;dbVar:nssv15129123;dbVar:nssv16215325;dbVar:nssv15130100;dbVar:nssv16209033;dbVar:nssv15172201;dbVar:nssv15606130;dbVar:nssv15132915;nssv16736610;dbVar:nssv16736624;nssv16736646;dbVar:nssv16091751;dbVar:nssv15130140;dbVar:nssv15146040;dbVar:nssv15148147;dbVar:nssv15146043;dbVar:nssv15145953;dbVar:nssv15148915;dbVar:nssv15148857;dbVar:nssv15146645\t15:20612841-23272733;15:20739498-28566579;15:20848751-32925141;15:21129985-32514926;15:21172301-26208861;15:21903816-23272733;15:22070541-23262343;15:22299435-23226254;15:22318598-28940098;15:22427967-23226254;15:22432629-30641396;15:22503622-23091180;15:22646195-23174919;15:22646195-23191269;15:22646195-23199953;15:22646195-23302626;15:22646195-23428906;15:22646693-28964445;15:22646800-23301267;15:22652048-28705151;15:22652331-23226254;15:22652331-23272733;15:22652331-29050198;15:22669053-28435888;15:22669053-30401486;15:22695843-23300942;15:22698523-28406650;15:22698523-28406709;15:22698523-28520313;15:22698523-28557186;15:22698523-28691460;15:22698523-29030517;15:22698523-29085896;15:22698523-38381783;15:22736247-23265381;15:22743128-23246000;15:22744150-23246340;15:22746945-23102836;15:22746945-23121448;15:22746945-23199421;15:22746949-23323445;15:22749636-23301317;15:22750306-23109890;15:22750306-23164315;15:22750306-23222284;15:22750306-23226254;15:22750306-23272733;15:22750306-28535266;15:22751195-23251194;15:22765629-23085096;15:22765629-23191062;15:22765629-23217514;15:22765629-23300287;15:22765629-28559402;15:22765629-28691460;15:22765629-28912057;15:22765629-28940098;15:22765629-28976193;15:22765629-32676855;15:22765638-29085888\t80.94;25.89;15.87;14.37;31.64;62.96;58.33;50.31;6.75;42.31;4.06;44.60;22.60;21.92;21.58;18.20;15.27;1.88;18.17;1.88;19.75;18.27;1.77;1.68;1.25;11.54;1.18;1.18;1.15;1.15;1.12;1.06;1.05;0.43;5.56;4.49;4.29;5.27;5.00;4.14;3.25;2.91;4.28;3.72;3.26;3.23;2.94;0.27;2.90;0.02;0.01;0.01;0.01;0.00;0.00;0.00;0.00;0.00;0.00;0.00\t\t\tdgv40e203;dgv93e55\t15:20016329-23487546;15:20167087-22869764\t0.1500\tdgv40e203;dgv94e55\t15:20016329-23487546;15:20167087-23222284\t0.1000\t\t\t\t\t\t\t\t\t15:20037886-21236662 DDD:43986;15:20167087-21200251 dgv91e55;15:20167087-22869764 dgv93e55;15:20203950-22588019 dgv2191n100;15:20550641-20637800 nsv514762;15:20575412-20599635 DDD:44041;15:20598943-20625797 1000g;15:20598943-20625797 1000g;15:20598943-20625797 1000g;15:20650251-20710056 nsv514763;15:20717000-20724000 gnomAD-SV_v2.1_DUP_15_39413;15:20749534-20773538 DDD:44053;15:20779661-20885221 DDD:44055;15:20786000-20827000 gnomAD-SV_v2.1_DUP_15_39420;15:20846722-20867075 1000g;15:20846722-20867075 1000g;15:20846722-20867075 1000g;15:20935077-20960284 nsv514764;15:21069662-21311925 DDD:44068;15:21153622-21170901 nsv514766...\t15:20016329-23487546 dgv40e203;15:20144627-21266621 DDD:43992;15:20167087-22588036 dgv92e55;15:20182203-22608281 DDD:44001;15:20388742-22207639 TS40:ISCA-46686;15:20556528-20624827 DDD:44039;15:20598943-20625797 1000g;15:20598943-20625797 1000g;15:20598943-20625797 1000g;15:20598943-20625797 dgv430e214;15:20686000-20711550 gnomAD-SV_v2.1_DUP_15_39411;15:20746872-20747023 DDD:44052;15:20751226-21293606 esv3892595;15:20783000-20799000 gnomAD-SV_v2.1_DUP_15_39419;15:20846722-20867075 1000g;15:20846722-20867075 1000g;15:20846722-20867075 1000g;15:20846722-20867075 dgv431e214;15:21040437-21077011 nsv514765;15:21145102-21164300 TS40:ISCA-46688...\t\t\t15:20144627-21266621 DDD:43992;15:20167090-22588036 dgv96e55;15:20396654-20496584 DDD:44013;15:20468142-20468256 DDD:44028;15:20547692-20548186 IMH;15:20575412-20599635 DDD:44041;15:20581464-20589613 esv2674516;15:20587419-20587601 gnomAD-SV_v2.1_DEL_15_145824;15:20698000-20706500 gnomAD-SV_v2.1_DEL_15_145825;chr15:20729175-20745525 dbVar;15:20749534-20773538 DDD:44053;chr15:20781000-20811000 dbVar;chr15:20820627-20821162 dbVar;chr15:20820696-20820748 dbVar;chr15:20891428-20891785 dbVar;chr15:20976350-20994050 dbVar;15:21042050-21056300 HI40:ISCA-46469;15:21042050-21056300 gnomAD-SV_v2.1_DEL_15_145837;chr15:21200932-21201488 dbVar;15:21321039-21325126 DDD:44088...\t15:20016329-23487546 dgv40e203;15:20167087-23222284 dgv94e55;15:20182203-22608281 DDD:44001;chr15:20436850-20437443 dbVar;chr15:20511834-20511893 dbVar;15:20556528-20624827 DDD:44039;15:20581414-20589751 IMH;chr15:20587419-20587601 dbVar;chr15:20698000-20706500 dbVar;15:20729175-20745525 HI40:ISCA-46468;chr15:20732300-20738500 dbVar;15:20779661-20885221 DDD:44055;chr15:20806100-20823500 dbVar;15:20820627-20821162 gnomAD-SV_v2.1_DEL_15_145830;chr15:20881220-20881325 dbVar;15:20945597-20946011 esv2664547;chr15:21017763-21017994 dbVar;chr15:21042050-21056300 dbVar;15:21069662-21311925 DDD:44068;chr15:21282800-21314300 dbVar...\t0.380\t0.455\t\t\t15:22765220-22765620;15:22765771-22766019\tL1MC4;L2\t\t\t15:20345908-20498625;15:20390971-20432871\t15:22754054-22770109\t15:20200401-22365100\tHigh Signal Region\t\t\t\t\t\t93.81\t\t\t\t2.22375841006203\t2.58284576037233\t\t\t\t\t\t\t\t\t\t\t\t8\t3.5277e-01\t5.7189e-01\t-1.0\t1A (cf Gene_count, RE_gene, +0.00);2D (cf B_gain_source, -1.00);2B (cf po_P_gain_source, TS, OMIM_morbid, +0.00);3A (26 genes, +0.00);4O (cf po_B_gain_AllG_source, B_gain_source, po_B_gain_SomeG_source, +0.00);5F 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2661412;15:22280466-22588019;15:22304657-22588026;15:22307890-22657533;15:22308418-22455534;15:22320058-22588019;chr15:22343965-22372302;15:22360686-22387071\t0.1300\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t76.23\t\t\t\t\t\t\t\t\t\t390538\tHGNC:15373\t\t\t\t\t\t9\t3.9447e-08\t\t\t\tfull=1\n15_20432852_22765687_DUP_1\t15\t20432852\t22765687\t2332836\tDUP\t\tBenign\tNA\tsplit\tq11.2\tOR4N4\t\t\t\tNM_001005241\t4\t22382472\t22383813\t1341\t951\t100\tno\t1\ttxStart-txEnd\t5'UTR-3'UTR\t\t\t22382472\t22383813\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tDDD:44001;DDD:44096;DDD:44106;DDD:44113;DDD:44114;DDD:44119;dgv2191n100;dgv3e224;dgv40e203;dgv92e55;dgv93e55;nsv514767\t15:20016329-23487546;15:20167087-22588036;15:20167087-22869764;15:20182203-22608281;15:20203950-22588019;15:21399090-22661412;15:22267463-22591752;15:22278200-22574827;15:22304657-22588026;15:22307890-22657533;15:22308418-22455534;15:22360686-22387071\t0.4271\tDDD:44001;DDD:44096;DDD:44113;DDD:44114;DDD:44119;dgv100e55;dgv2373n100;dgv40e203;dgv94e55;dgv96e55;nsv514767\t15:20016329-23487546;15:20167087-23222284;15:20167090-22588036;15:20182203-22608281;15:21399090-22661412;15:22280466-22588019;15:22304657-22588026;15:22307890-22657533;15:22308418-22455534;15:22320058-22588019;15:22360686-22387071\t0.1300\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t75.33\t\t\t\t-0.271906921498889\t-0.565772314050669\t\t\t\t\t283694\tHGNC:15375\t\t\t\t\t\t9\t5.1332e-05\t1.8051e-02\t\t\tfull=1\n15_20432852_22765687_DUP_1\t15\t20432852\t22765687\t2332836\tDUP\t\tBenign\tNA\tsplit\tq11.2\tOR4N3P\t\t\t\tNR_028067\t1\t22413461\t22414398\t937\t0\t0\tNA\t1\ttxStart-txEnd\tUTR\t\t\t22413461\t22414398\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t1000g;DDD:44001;DDD:44096;DDD:44106;DDD:44113;DDD:44114;DDD:44129;dgv2191n100;dgv3e224;dgv40e203;dgv437e214;dgv92e55;dgv93e55;nsv514767\t15:20016329-23487546;15:20167087-22588036;15:20167087-22869764;15:20182203-22608281;15:20203950-22588019;15:21399090-22661412;15:22267463-22591752;15:22278200-22574827;15:22304657-22588026;15:22307890-22657533;15:22308418-22455534;15:22383478-22434169;15:22383478-22434169;15:22383478-22434169;15:22383478-22434169;15:22383478-22434169;15:22411349-22577661\t0.4271\tDDD:44001;DDD:44096;DDD:44113;DDD:44114;DDD:44129;dbVar;dgv100e55;dgv2373n100;dgv40e203;dgv94e55;dgv96e55;nsv514767\t15:20016329-23487546;15:20167087-23222284;15:20167090-22588036;15:20182203-22608281;15:21399090-22661412;15:22280466-22588019;15:22304657-22588026;15:22307890-22657533;15:22308418-22455534;15:22320058-22588019;chr15:22383477-22434169;15:22411349-22577661\t0.1300\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t390539\tHGNC:15374\t\t\t\t\t\t\t\t\t\t\tfull=1\n15_20432852_22765687_DUP_1\t15\t20432852\t22765687\t2332836\tDUP\t\tBenign\tNA\tsplit\tq11.2\tIGHV1OR15-1\t\t\t\tNR_135694\t1\t22448239\t22448881\t642\t0\t0\tNA\t2\ttxStart-txEnd\tUTR\t\t\t22448239\t22448881\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t1000g;DDD:44001;DDD:44096;DDD:44106;DDD:44113;DDD:44114;DDD:44129;dgv2191n100;dgv3e224;dgv40e203;dgv438e214;dgv92e55;dgv93e55;nsv514767\t15:20016329-23487546;15:20167087-22588036;15:20167087-22869764;15:20182203-22608281;15:20203950-22588019;15:21399090-22661412;15:22267463-22591752;15:22278200-22574827;15:22304657-22588026;15:22307890-22657533;15:22308418-22455534;15:22411349-22577661;15:22446740-22506103;15:22446740-22506103;15:22446740-22506103;15:22446740-22506103;15:22446740-22506103\t0.4271\tDDD:44001;DDD:44096;DDD:44113;DDD:44114;DDD:44129;dbVar;dgv100e55;dgv2373n100;dgv40e203;dgv94e55;dgv96e55;nsv514767\t15:20016329-23487546;15:20167087-23222284;15:20167090-22588036;15:20182203-22608281;15:21399090-22661412;15:22280466-22588019;15:22304657-22588026;15:22307890-22657533;15:22308418-22455534;15:22320058-22588019;15:22411349-22577661;chr15:22446739-22506103\t0.1300\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t388077\tHGNC:5563\t\t\t\t\t\t\t\t\t\t\tfull=1\n15_20432852_22765687_DUP_1\t15\t20432852\t22765687\t2332836\tDUP\t\tBenign\tNA\tsplit\tq11.2\tIGHV1OR15-3\t\t\t\tNR_135666\t1\t22465805\t22466547\t742\t0\t0\tNA\t2\ttxStart-txEnd\tUTR\t\t\t22465805\t22466547\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t1000g;DDD:44001;DDD:44096;DDD:44106;DDD:44113;DDD:44129;dgv2191n100;dgv3e224;dgv40e203;dgv438e214;dgv92e55;dgv93e55;nsv514767\t15:20016329-23487546;15:20167087-22588036;15:20167087-22869764;15:20182203-22608281;15:20203950-22588019;15:21399090-22661412;15:22267463-22591752;15:22278200-22574827;15:22304657-22588026;15:22307890-22657533;15:22411349-22577661;15:22446740-22506103;15:22446740-22506103;15:22446740-22506103;15:22446740-22506103;15:22446740-22506103\t0.4271\tDDD:44001;DDD:44096;DDD:44113;DDD:44129;dbVar;dgv100e55;dgv2373n100;dgv40e203;dgv94e55;dgv96e55;nsv514767\t15:20016329-23487546;15:20167087-23222284;15:20167090-22588036;15:20182203-22608281;15:21399090-22661412;15:22280466-22588019;15:22304657-22588026;15:22307890-22657533;15:22320058-22588019;15:22411349-22577661;chr15:22446739-22506103\t0.1300\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t646370\tHGNC:5565\t\t\t\t\t\t\t\t\t\t\tfull=1\n15_20432852_22765687_DUP_1\t15\t20432852\t22765687\t2332836\tDUP\t\tBenign\tNA\tsplit\tq11.2\tMIR1268A\t\t\t\tNR_031672\t1\t22513228\t22513280\t52\t0\t0\tNA\t1\ttxStart-txEnd\tUTR\t\t\t22513228\t22513280\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tDDD:44001;DDD:44096;DDD:44106;DDD:44113;DDD:44129;dgv2191n100;dgv3e224;dgv40e203;dgv92e55;dgv93e55;nsv514767\t15:20016329-23487546;15:20167087-22588036;15:20167087-22869764;15:20182203-22608281;15:20203950-22588019;15:21399090-22661412;15:22267463-22591752;15:22278200-22574827;15:22304657-22588026;15:22307890-22657533;15:22411349-22577661\t0.4271\tDDD:44001;DDD:44096;DDD:44113;DDD:44129;DDD:44139;dgv100e55;dgv2373n100;dgv40e203;dgv94e55;dgv96e55;nsv514767\t15:20016329-23487546;15:20167087-23222284;15:20167090-22588036;15:20182203-22608281;15:21399090-22661412;15:22280466-22588019;15:22304657-22588026;15:22307890-22657533;15:22320058-22588019;15:22411349-22577661;15:22475646-22537915\t0.1300\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t100302233\tHGNC:35336\t\t\t\t\t\t\t\t\t\t\tfull=1\n15_20432852_22765687_DUP_1\t15\t20432852\t22765687\t2332836\tDUP\t\tBenign\tNA\tsplit\tq11.2\tREREP3\t\t\t\tNR_033735\t1\t22546564\t22570831\t24267\t0\t0\tNA\t3\ttxStart-txEnd\tUTR\t\t\t22546564\t22570831\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tDDD:44001;DDD:44096;DDD:44106;DDD:44113;DDD:44129;DDD:44147;dgv2191n100;dgv3e224;dgv40e203;dgv92e55;dgv93e55;nsv514767\t15:20016329-23487546;15:20167087-22588036;15:20167087-22869764;15:20182203-22608281;15:20203950-22588019;15:21399090-22661412;15:22267463-22591752;15:22278200-22574827;15:22304657-22588026;15:22307890-22657533;15:22411349-22577661;15:22519942-22726364\t0.4271\tDDD:44001;DDD:44096;DDD:44113;DDD:44129;DDD:44147;dgv100e55;dgv2373n100;dgv40e203;dgv94e55;dgv96e55;nsv514767\t15:20016329-23487546;15:20167087-23222284;15:20167090-22588036;15:20182203-22608281;15:21399090-22661412;15:22280466-22588019;15:22304657-22588026;15:22307890-22657533;15:22320058-22588019;15:22411349-22577661;15:22519942-22726364\t0.1300\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t646396\tHGNC:38797\t\t\t\t\t\t\t\t\t\t\tfull=1\n15_20432852_22765687_DUP_1\t15\t20432852\t22765687\t2332836\tDUP\t\tBenign\tNA\tsplit\tq11.2\tMIR4509-1\t\t\t\tNR_039732\t1\t22675147\t22675241\t94\t0\t0\tNA\t1\ttxStart-txEnd\tUTR\t\t\t22675147\t22675241\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tDDD:44147;DDD:44168;dgv40e203;dgv93e55\t15:20016329-23487546;15:20167087-22869764;15:22519942-22726364;15:22650162-22738662\t0.1500\tDDD:44147;DDD:44168;dgv40e203;dgv94e55\t15:20016329-23487546;15:20167087-23222284;15:22519942-22726364;15:22650162-22738662\t0.1000\t\t\t\tIMH\t15:22658037-28688749\t0.1570\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t100616223\tHGNC:41860\t\t\t\t\t\t\t\t\t\t\tfull=1\n15_20432852_22765687_DUP_1\t15\t20432852\t22765687\t2332836\tDUP\t\tBenign\tNA\tsplit\tq11.2\tGOLGA8DP\t\t\t\tNR_027407\t1\t22702284\t22715728\t13444\t0\t0\tNA\t18\ttxStart-txEnd\tUTR\t\t\t22702284\t22715728\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tDDD:44147;DDD:44168;dgv40e203;dgv93e55\t15:20016329-23487546;15:20167087-22869764;15:22519942-22726364;15:22650162-22738662\t0.1500\tDDD:44147;DDD:44168;dgv40e203;dgv94e55\t15:20016329-23487546;15:20167087-23222284;15:22519942-22726364;15:22650162-22738662\t0.1000\t\t\t\tIMH\t15:22658037-28688749\t0.1570\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t100132979\tHGNC:32376\t\t\t\t\t\t\t\t\t\t\tfull=1\n15_20432852_22765687_DUP_1\t15\t20432852\t22765687\t2332836\tDUP\t\tBenign\tNA\tsplit\tq11.2\tGOLGA6L1\t\t\t\tNM_001001413\t3\t22736245\t22746002\t9757\t2007\t100\tno\t9\ttxStart-txEnd\t5'UTR-3'UTR\t\t\t22736245\t22746002\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tdgv40e203;dgv93e55\t15:20016329-23487546;15:20167087-22869764\t0.1500\tdgv40e203;dgv94e55\t15:20016329-23487546;15:20167087-23222284\t0.1000\t\t\t\tIMH\t15:22658037-28688749\t0.1570\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t93.48\t\t\t\t\t\t\t\t\t\t283767\tHGNC:37444\t\t\t\t\t\t8\t2.3586e-12\t\t\t\tfull=1\n15_20564609_22409391_DEL_1\t15\t20564609\t22409391\t-1844783\tDEL\t\tBenign\tNA\tfull\tq11.1-q11.2\tHERC2P3;GOLGA6L6;GOLGA8CP;NBEAP1;MIR3118-2;POTEB2;MIR5701-1;LINC01193;FAM30C;LOC646214;CXADRP2;POTEB;NF1P2;LINC02203;OR4M2-OT1;OR4M2;OR4N4\tCHEK2P2\tOR4N3P\t17\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tADAM22 (morbid/RE=mTL_miRNA);CA12 (morbid/RE=mTL_miRNA);CDKN1B (HI=3/morbid/RE=mTL_miRNA);DICER1 (HI=3/morbid/RE=mTL_miRNA);EDAR (morbid/RE=mTL_miRNA);EGLN1 (morbid/RE=mTL_miRNA);ERBB3 (morbid/RE=mTL_miRNA);GABRB2 (morbid/RE=mTL_miRNA);GATA6 (HI=3/morbid/RE=mTL_miRNA);HSPD1 (morbid/RE=mTL_miRNA);IL6ST (morbid/RE=mTL_miRNA);INF2 (morbid/RE=mTL_miRNA);ISCU (morbid/RE=mTL_miRNA);KAT6B (HI=3/morbid/RE=mTL_miRNA);KCNJ10 (morbid/RE=mTL_miRNA);KLHL3 (morbid/RE=mTL_miRNA);KMT2D (HI=3/morbid/RE=mTL_miRNA);LRIG2 (morbid/RE=mTL_miRNA);MAGEL2 (morbid/RE=ABC_enhancer);MAPKAPK5 (morbid/RE=mTL_miRNA);MKRN3 (morbid/RE=ABC_enhancer);NDUFS1 (morbid/RE=mTL_miRNA);NIPA1 (morbid/RE=ABC_enhancer);NPM1 (morbid/RE=mTL_miRNA);PEX26 (morbid/RE=mTL_miRNA);PHF12 (HI=3/RE=mTL_miRNA);PIGP (morbid/RE=mTL_miRNA);POT1 (morbid/RE=mTL_miRNA);PRLR (morbid/RE=mTL_miRNA);PURA (HI=3/morbid/RE=mTL_miRNA);RAC3 (morbid/RE=mTL_miRNA);SH2D1A (HI=3/morbid/RE=mTL_miRNA);SKI (morbid/RE=mTL_miRNA);SLC6A6 (morbid/RE=mTL_miRNA);SLC7A14 (morbid/RE=mTL_miRNA);SLC7A7 (morbid/RE=mTL_miRNA);SMAD4 (HI=3/morbid/RE=mTL_miRNA);SMAD6 (morbid/RE=mTL_miRNA);SMOC1 (morbid/RE=mTL_miRNA);SMOC2 (morbid/RE=mTL_miRNA);SOX17 (morbid/RE=mTL_miRNA);TULP1 (morbid/RE=mTL_miRNA);USP48 (morbid/RE=mTL_miRNA);ZBTB18 (HI=3/morbid/RE=mTL_miRNA);ZNF711 (morbid/RE=mTL_miRNA)\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tdbVar:nssv15172447;dbVar:nssv15149081;dbVar:nssv15148902;dbVar:nssv15125410;dbVar:nssv15127689;dbVar:nssv15127462;dbVar:nssv15126524;dbVar:nssv15124656;dbVar:nssv15127659;dbVar:nssv15126021;dbVar:nssv15172190;dbVar:nssv15150569;dbVar:nssv15147052;dbVar:nssv15145742;dbVar:nssv15147053;dbVar:nssv15175556;dbVar:nssv15145744;dbVar:nssv15774514;dbVar:nssv15148785;dbVar:nssv15605894;dbVar:nssv15149135;dbVar:nssv15148575;dbVar:nssv15147687;dbVar:nssv15605895;dbVar:nssv15147058;dbVar:nssv15145747;dbVar:nssv15146452;dbVar:nssv15149084;dbVar:nssv15147355;dbVar:nssv15149616;dbVar:nssv15147801;dbVar:nssv15146958;dbVar:nssv15149124;dbVar:nssv15123304;dbVar:nssv15147513;dbVar:nssv15127079;dbVar:nssv15605897;dbVar:nssv15605899\t15:20016812-102493540;15:20044343-28924405;15:20045835-32914140;15:20063341-102521392;15:20063341-29093456;15:20063341-29209620;15:20063341-30448351;15:20063341-32439302;15:20063341-32942613;15:20063341-32986584;15:20071674-102461162;15:20071674-30737344;15:20085003-28947309;15:20085003-29210720;15:20085004-28178425;15:20102541-29031690;15:20110723-28408897;15:20179528-32998070;15:20190549-28406650;15:20190549-30300265;15:20190549-32386089;15:20190549-32917801;15:20190549-32917857;15:20191653-28525310;15:20207714-30641396;15:20207714-32413623;15:20251769-28631040;15:20306550-26208861;15:20686197-30509384;15:20733396-102511616;15:20733396-28406650;15:20733396-28406709;15:20848461-27662530;15:21129985-28535266;15:22304597-28577787;15:22318645-29209620;15:22382861-32396457;15:22383300-32917689\t2.24;20.77;14.34;2.24;20.43;20.17;17.76;14.91;14.32;14.27;2.24;17.30;20.82;20.22;22.79;20.66;22.23;14.39;22.45;18.25;15.13;14.49;14.49;22.14;17.68;15.11;22.02;31.26;17.54;2.05;21.84;21.84;22.91;17.28;1.67;1.32;0.26;0.25\t\t\tdbVar:nssv16865885;dbVar:nssv18326337;dbVar:nssv15605896;dbVar:nssv15123310;dbVar:nssv18841918;dbVar:nssv16208656;dbVar:nssv18792791;dbVar:nssv16215320;dbVar:nssv15147060\t15:20612841-23272733;15:20739498-28566579;15:20848751-32925141;15:21129985-32514926;15:21172301-26208861;15:21903816-23272733;15:22070541-23262343;15:22299435-23226254;15:22318598-28940098\t67.54;21.33;12.92;11.24;24.56;36.93;28.43;11.86;1.37\t\t\tDDD:44001;dgv2191n100;dgv40e203;dgv92e55;dgv93e55\t15:20016329-23487546;15:20167087-22588036;15:20167087-22869764;15:20182203-22608281;15:20203950-22588019\t0.3900\tDDD:44001;dgv40e203;dgv94e55;dgv96e55\t15:20016329-23487546;15:20167087-23222284;15:20167090-22588036;15:20182203-22608281\t0.1300\t\t\t\t\t\t\t\t\t15:20037886-21236662 DDD:43986;15:20167087-21200251 dgv91e55;15:20167087-22869764 dgv93e55;15:20203950-22588019 dgv2191n100;15:20550641-20637800 nsv514762;15:20575412-20599635 DDD:44041;15:20598943-20625797 1000g;15:20598943-20625797 1000g;15:20598943-20625797 1000g;15:20650251-20710056 nsv514763;15:20717000-20724000 gnomAD-SV_v2.1_DUP_15_39413;15:20749534-20773538 DDD:44053;15:20779661-20885221 DDD:44055;15:20786000-20827000 gnomAD-SV_v2.1_DUP_15_39420;15:20846722-20867075 1000g;15:20846722-20867075 1000g;15:20846722-20867075 1000g;15:20935077-20960284 nsv514764;15:21069662-21311925 DDD:44068;15:21153622-21170901 nsv514766...\t15:20016329-23487546 dgv40e203;15:20144627-21266621 DDD:43992;15:20167087-22588036 dgv92e55;15:20182203-22608281 DDD:44001;15:20388742-22207639 TS40:ISCA-46686;15:20556528-20624827 DDD:44039;15:20598943-20625797 1000g;15:20598943-20625797 1000g;15:20598943-20625797 1000g;15:20598943-20625797 dgv430e214;15:20686000-20711550 gnomAD-SV_v2.1_DUP_15_39411;15:20746872-20747023 DDD:44052;15:20751226-21293606 esv3892595;15:20783000-20799000 gnomAD-SV_v2.1_DUP_15_39419;15:20846722-20867075 1000g;15:20846722-20867075 1000g;15:20846722-20867075 1000g;15:20846722-20867075 dgv431e214;15:21040437-21077011 nsv514765;15:21145102-21164300 TS40:ISCA-46688...\t\t\t15:20144627-21266621 DDD:43992;15:20167090-22588036 dgv96e55;15:20556528-20624827 DDD:44039;15:20581414-20589751 IMH;chr15:20587419-20587601 dbVar;chr15:20698000-20706500 dbVar;15:20729175-20745525 HI40:ISCA-46468;chr15:20732300-20738500 dbVar;15:20779661-20885221 DDD:44055;chr15:20806100-20823500 dbVar;15:20820627-20821162 gnomAD-SV_v2.1_DEL_15_145830;chr15:20881220-20881325 dbVar;15:20945597-20946011 esv2664547;chr15:21017763-21017994 dbVar;chr15:21042050-21056300 dbVar;15:21069662-21311925 DDD:44068;chr15:21282800-21314300 dbVar;chr15:21348205-21348677 dbVar;chr15:21888050-21888102 dbVar;15:21904679-21949433 DDD:44097...\t15:20016329-23487546 dgv40e203;15:20167087-23222284 dgv94e55;15:20182203-22608281 DDD:44001;15:20575412-20599635 DDD:44041;15:20581464-20589613 esv2674516;15:20587419-20587601 gnomAD-SV_v2.1_DEL_15_145824;15:20698000-20706500 gnomAD-SV_v2.1_DEL_15_145825;chr15:20729175-20745525 dbVar;15:20749534-20773538 DDD:44053;chr15:20781000-20811000 dbVar;chr15:20820627-20821162 dbVar;chr15:20820696-20820748 dbVar;chr15:20891428-20891785 dbVar;chr15:20976350-20994050 dbVar;15:21042050-21056300 HI40:ISCA-46469;15:21042050-21056300 gnomAD-SV_v2.1_DEL_15_145837;chr15:21200932-21201488 dbVar;15:21321039-21325126 DDD:44088;15:21399090-22661412 DDD:44096;15:21888050-21888102 gnomAD-SV_v2.1_DEL_15_145844...\t0.310\t0.275\t\t\t\t\t\t\t15:20564282-20581643\t15:22292726-22423285\t15:20200401-22365100\tHigh Signal Region\t15:22387401-22749100\tLow Mappability\t\t\t\t93.81\t\t\t\t2.22375841006203\t2.58284576037233\t\t\t\t\t\t\t\t\t\t\t\t8\t3.5277e-01\t5.7189e-01\t-1.0\t1A (cf Gene_count, RE_gene, +0.00);2F/4O (cf B_loss_source, -1.00);2B (cf po_P_loss_source, HI, OMIM_morbid, +0.00;3A (17 genes, +0.00);5F 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(morbid/RE=ABC_enhancer);RYR3 (morbid/RE=ABC_enhancer);SLC12A6 (morbid/RE=ABC_enhancer+EA_enhancer)\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tdbVar:nssv15172447;dbVar:nssv15125410;dbVar:nssv15172190;dbVar:nssv15149616;dbVar:nssv15147411;dbVar:nssv15150618;nssv15150717;dbVar:nssv15151655;dbVar:nssv15145681\t15:20016812-102493540;15:20063341-102521392;15:20071674-102461162;15:20733396-102511616;15:22765629-38837526;15:22770423-102429112;15:31115048-102354857;15:32899500-35492630\t0.09;0.09;0.09;0.09;0.44;0.09;0.10;2.74\t\t\tdbVar:nssv15147319;dbVar:nssv16208403;dbVar:nssv15127755;dbVar:nssv15148236;dbVar:nssv15127602;dbVar:nssv16208407;dbVar:nssv15154730;dbVar:nssv15146365;dbVar:nssv15146268;dbVar:nssv17976656;dbVar:nssv16208948;dbVar:nssv18788041\t15:22698523-38381783;15:22770422-36861479;15:23622527-102521392;15:25279017-37496505;15:29209621-102521392;15:31675453-35689958;15:32446830-34868996;15:32618338-39686269;15:32928005-40526026;15:33809651-40027263;15:34197489-38656254;15:34526073-35087019\t0.45;0.50;0.09;0.58;0.10;1.77;2.93;1.00;0.93;1.14;1.59;12.66\t\t\t1000g\t15:34721237-34836826\t0.0144\t1000g;DDD:44673;DDD:44674;HI40:ISCA-46481;HI40:ISCA-46482;dbVar;dgv2562n100;dgv313n27;dgv43e203;esv3636115;esv3892663;gnomAD-SV_v2.1_DEL_15_146738;gnomAD-SV_v2.1_DEL_15_146739;nsv517751\t15:34647569-34871296;15:34674031-35008201;15:34674425-35009836;15:34678778-34862723;15:34710127-34856557;chr15:34710127-34856557;15:34710127-34856557;15:34714112-34830932;15:34718595-34807869;15:34718595-34871296;chr15:34721236-34836826;15:34721237-34836826;15:34721237-34836826;15:34726358-34872885;chr15:34726358-34872885;15:34726358-34872885\t0.1680\t\t\t\t\t\t\t\t\t15:34741740-34742019 1000g\t15:34721237-34836826 1000g\t\t\t15:34674031-35008201 DDD:44673;15:34678778-34862723 dgv43e203;chr15:34710127-34856557 dbVar;15:34714112-34830932 dgv2562n100;15:34718595-34807869 esv3892663;chr15:34721236-34836826 dbVar;15:34721237-34836826 esv3636115;chr15:34726358-34872885 dbVar;15:34741740-34742019 1000g;15:34741749-34742029 esv2678102;15:34741752-34742021 gnomAD-SV_v2.1_DEL_15_146741;chr15:34746988-34747300 dbVar;15:34779146-34783492 esv2667455;chr15:34785640-34786870 dbVar;15:34802473-34810922 1000g;15:34802548-34810836 DDD:44684;15:34802595-34810858 gnomAD-SV_v2.1_DEL_15_146744\t15:34647569-34871296 nsv517751;15:34674425-35009836 DDD:44674;15:34710127-34856557 HI40:ISCA-46481;15:34710127-34856557 gnomAD-SV_v2.1_DEL_15_146738;15:34718595-34800595 dgv312n27;15:34718595-34871296 dgv313n27;15:34721237-34836826 1000g;15:34726358-34872885 HI40:ISCA-46482;15:34726358-34872885 gnomAD-SV_v2.1_DEL_15_146739;chr15:34741740-34742019 dbVar;chr15:34741752-34742021 dbVar;chr15:34743793-34743843 dbVar;15:34746988-34747300 gnomAD-SV_v2.1_DEL_15_146743;15:34779302-34783300 DDD:44682;chr15:34802472-34810922 dbVar;15:34802473-34810922 esv3636118;chr15:34802595-34810858 dbVar\t0.340\t0.660\t\t\t\t\t\t\t15:34730084-34776964\t15:34782963-34820866;15:34800001-34813836\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t-1.0\t1A (cf Gene_count, RE_gene, +0.00);2F/4O (cf B_loss_source, -1.00);2B (cf po_P_loss_source, HI, OMIM_morbid, +0.00;3A (0 gene, +0.00);5F (+0.00)\t1\n16_32471626_33487672_DEL_1\t16\t32471626\t33487672\t-1016047\tDEL\t\tBenign\tNA\tfull\tp11.2\tLOC107987382;TP53TG3;SLC6A10P;TP53TG3C;LOC105369266;TP53TG3B;LOC107987386\tLOC390705\tENPP7P13\t7\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tdbVar:nssv15158812;dbVar:nssv15148703;dbVar:nssv15150639;nssv15151292;dbVar:nssv15158813;dbVar:nssv15158224;dbVar:nssv16216874;dbVar:nssv15126545;dbVar:nssv15133058;dbVar:nssv15126469\t16:61452-90294632;16:69194-90274381;16:85882-90155062;16:88166-90163275;16:88166-90274695;16:5805002-34230001;16:24381954-33923059;16:30703234-35147508;16:31986099-90294753\t1.13;1.13;1.13;1.13;1.13;3.57;10.65;22.86;1.74\t\t\tdbVar:nssv15141243\t16:28826163-34375007\t18.31\t\t\tDDD:47058;DDD:47062;dgv50e203\t16:31749454-34012168;16:32055083-33851279;16:32123333-33664028\t0.0700\tDDD:47058;DDD:47062;dgv50e203\t16:31749454-34012168;16:32055083-33851279;16:32123333-33664028\t0.0715\t\t\t\tIMH\t16:24121264-80276578;16:29238285-88227116;16:32354183-33512427;16:32354247-33512560\t0.4996\t\t\t16:32055083-33851279 DDD:47058;16:32129166-32904510 DDD:47063;16:32345385-33344188 IMH;16:32486529-32486871 DDD:47082;16:32511180-33912324 dgv821e212;16:32611030-32642738 1000g;16:32611030-32642738 dgv507e214;16:32740800-32750700 gnomAD-SV_v2.1_DUP_16_42037;16:32831660-32863935 1000g;16:32831660-32863935 dgv508e214;16:32903492-32927819 1000g;16:33204449-33378738 DDD:47113;16:33231300-33237300 gnomAD-SV_v2.1_DUP_16_42041;16:33286000-33293700 gnomAD-SV_v2.1_DUP_16_42046;16:33376004-33548487 DDD:47124;16:33446164-33480261 1000g;16:33446164-33480261 dgv510e214;16:33470756-33495606 1000g;16:33470756-33495606 dgv511e214;16:33484522-33543753 1000g...\t16:31749454-34012168 dgv50e203;16:32123333-33664028 DDD:47062;16:32257510-32714406 esv2421440;16:32473116-32486576 DDD:47080;16:32489448-32622550 dgv4e224;16:32589803-32684945 DDD:47091;16:32611030-32642738 1000g;16:32684868-32688916 DDD:47098;16:32831660-32863935 1000g;16:32831660-32863935 1000g;16:32900256-32908555 nsv514802;16:32903492-32927819 dgv509e214;16:33230271-33739925 DDD:47114;16:33270420-33827235 DDD:47116;16:33302092-33630727 nsv514803;16:33406659-33406773 IMH;16:33446164-33480261 1000g;16:33464249-33499453 DDD:47125;16:33470756-33495606 1000g;16:33473790-33628580 DDD:47126...\t\t\t16:32052946-32496748 DDD:47057;16:32123333-33664028 DDD:47062;16:32257510-32714406 esv2421440;chr16:32473466-32473664 dbVar;16:32485788-32648832 DDD:47081;16:32489448-32622550 dgv4e224;chr16:32494596-32496820 dbVar;chr16:32511665-32511727 dbVar;16:32524651-32525229 IMH;16:32532282-32533735 IMH;16:32562331-32601372 IMH;chr16:32586298-32586783 dbVar;16:32588181-32590788 1000g;16:32589803-32684945 DDD:47091;chr16:32598581-32602963 dbVar;16:32598582-32602963 esv3638436;16:32600138-32601847 IMH;16:32600306-32601869 1000g;16:32600344-32601845 IMH;chr16:32611029-32642738 dbVar...\t16:31749454-34012168 dgv50e203;16:32055083-33851279 DDD:47058;16:32129166-32904510 DDD:47063;16:32298051-32812316 DDD:47074;chr16:32485126-32485204 dbVar;16:32486808-32486871 DDD:47084;chr16:32491490-32496732 dbVar;16:32511180-32878155 dgv819e212;16:32518848-32519371 IMH;16:32525918-32525974 IMH;16:32541493-32648861 DDD:47087;16:32562341-32600296 IMH;chr16:32588180-32590788 dbVar;16:32588181-32590788 esv3638433;16:32590685-32653097 DDD:47092;16:32598582-32602963 1000g;chr16:32598863-32598991 dbVar;chr16:32600305-32601869 dbVar;16:32600306-32601869 esv3638437;16:32600531-32601385 IMH...\t0.255\t0.275\t16:32471562-32471589\tAT_rich\t\t\t\t\t16:32328196-32493021;16:32333061-32489849;16:32333061-32492391;16:32462184-32472474\t16:33363548-33517471;16:33465320-33517471;16:33466597-33509202\t\t\t\t\t\t\t\t94.39\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t-1.0\t1A (cf Gene_count, RE_gene, +0.00);2F/4O (cf B_loss_source, -1.00);2B (cf po_P_loss_source, HI, OMIM_morbid, +0.00;3A (7 genes, +0.00);5F (+0.00)\t1\n16_32471626_33487672_DEL_1\t16\t32471626\t33487672\t-1016047\tDEL\t\tBenign\tNA\tsplit\tp11.2\tLOC107987382\t\t\t\tNR_171659\t1\t32611681\t32626892\t15211\t0\t0\tNA\t8\ttxStart-txEnd\tUTR\t\t\t32611681\t32626892\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t1000g;DDD:47058;DDD:47062;DDD:47063;DDD:47091;IMH;dgv507e214;dgv50e203;dgv821e212;esv2421440\t16:31749454-34012168;16:32055083-33851279;16:32123333-33664028;16:32129166-32904510;16:32257510-32714406;16:32345385-33344188;16:32511180-33912324;16:32589803-32684945;16:32611030-32642738;16:32611030-32642738;16:32611030-32642738\t0.8086\tDDD:47058;DDD:47062;DDD:47063;DDD:47074;DDD:47081;DDD:47087;DDD:47091;DDD:47092;dbVar;dgv50e203;dgv819e212;esv2421440\t16:31749454-34012168;16:32055083-33851279;16:32123333-33664028;16:32129166-32904510;16:32257510-32714406;16:32298051-32812316;16:32485788-32648832;16:32511180-32878155;16:32541493-32648861;16:32589803-32684945;16:32590685-32653097;chr16:32611029-32642738\t0.2300\t\t\t\tIMH\t16:24121264-80276578;16:29238285-88227116;16:32354183-33512427;16:32354247-33512560\t0.4996\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tfull=1\n16_32471626_33487672_DEL_1\t16\t32471626\t33487672\t-1016047\tDEL\t\tBenign\tNA\tsplit\tp11.2\tTP53TG3\t\t\t\tNM_016212\t5\t32684850\t32687486\t2636\t375\t100\tno\t2\ttxStart-txEnd\t5'UTR-3'UTR\t\t\t32684850\t32687486\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tDDD:47058;DDD:47062;DDD:47063;IMH;dgv50e203;dgv821e212;esv2421440\t16:31749454-34012168;16:32055083-33851279;16:32123333-33664028;16:32129166-32904510;16:32257510-32714406;16:32345385-33344188;16:32511180-33912324\t0.3314\tDDD:47058;DDD:47062;DDD:47063;DDD:47074;HI40:ISCA-46492;dbVar;dgv50e203;dgv819e212;esv2421440\t16:31749454-34012168;16:32055083-33851279;16:32123333-33664028;16:32129166-32904510;16:32257510-32714406;16:32298051-32812316;16:32511180-32878155;16:32656000-32802000;chr16:32656000-32802000\t0.2300\t\t\t\tIMH\t16:24121264-80276578;16:29238285-88227116;16:32354183-33512427;16:32354247-33512560\t0.4996\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t94.39\t\t\t\t\t\t\t\t\t\t24150\tHGNC:30759\t\t\t\t\t\t\t\t\t\t\tfull=1\n16_32471626_33487672_DEL_1\t16\t32471626\t33487672\t-1016047\tDEL\t\tBenign\tNA\tsplit\tp11.2\tSLC6A10P\t\t\t\tNR_003083\t3\t32888793\t32896463\t7670\t0\t0\tNA\t9\ttxStart-txEnd\tUTR\t\t\t32888793\t32896463\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tDDD:47058;DDD:47062;DDD:47063;IMH;dgv50e203;dgv821e212\t16:31749454-34012168;16:32055083-33851279;16:32123333-33664028;16:32129166-32904510;16:32345385-33344188;16:32511180-33912324\t0.3314\tDDD:47058;DDD:47062;DDD:47063;dgv50e203\t16:31749454-34012168;16:32055083-33851279;16:32123333-33664028;16:32129166-32904510\t0.1692\t\t\t\tIMH\t16:24121264-80276578;16:29238285-88227116;16:32354183-33512427;16:32354247-33512560\t0.4996\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t386757\tHGNC:11043\t\t\t\t\t\t\t\t\t\t\tfull=1\n16_32471626_33487672_DEL_1\t16\t32471626\t33487672\t-1016047\tDEL\t\tBenign\tNA\tsplit\tp11.2\tTP53TG3C\t\t\t\tNM_001205259\t3\t33205546\t33208179\t2633\t375\t100\tno\t2\ttxStart-txEnd\t5'UTR-3'UTR\t\t\t33205546\t33208179\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tDDD:47058;DDD:47062;DDD:47113;IMH;dgv50e203;dgv821e212\t16:31749454-34012168;16:32055083-33851279;16:32123333-33664028;16:32345385-33344188;16:32511180-33912324;16:33204449-33378738\t0.3314\tDDD:47058;DDD:47062;DDD:47113;dgv50e203\t16:31749454-34012168;16:32055083-33851279;16:32123333-33664028;16:33204449-33378738\t0.0715\t\t\t\tIMH\t16:24121264-80276578;16:29238285-88227116;16:32354183-33512427;16:32354247-33512560\t0.4996\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t91.96\t\t\t\t\t\t\t\t\t\t653550\tHGNC:42962\t\t\t\t\t\t\t\t\t\t\tfull=1\n16_32471626_33487672_DEL_1\t16\t32471626\t33487672\t-1016047\tDEL\t\tBenign\tNA\tsplit\tp11.2\tLOC105369266\t\t\t\tNR_158162\t1\t33215160\t33232409\t17249\t0\t0\tNA\t6\ttxStart-txEnd\tUTR\t\t\t33215160\t33232409\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tDDD:47058;DDD:47062;DDD:47113;IMH;dgv50e203;dgv821e212\t16:31749454-34012168;16:32055083-33851279;16:32123333-33664028;16:32345385-33344188;16:32511180-33912324;16:33204449-33378738\t0.3314\tDDD:47058;DDD:47062;DDD:47113;dgv50e203\t16:31749454-34012168;16:32055083-33851279;16:32123333-33664028;16:33204449-33378738\t0.0715\t\t\t\tIMH\t16:24121264-80276578;16:29238285-88227116;16:32354183-33512427;16:32354247-33512560\t0.4996\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tfull=1\n16_32471626_33487672_DEL_1\t16\t32471626\t33487672\t-1016047\tDEL\t\tBenign\tNA\tsplit\tp11.2\tTP53TG3B\t\t\t\tNM_001099687\t4\t33262081\t33264719\t2638\t375\t100\tno\t2\ttxStart-txEnd\t5'UTR-3'UTR\t\t\t33262081\t33264719\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tDDD:47058;DDD:47062;DDD:47113;DDD:47114;IMH;dgv50e203;dgv821e212\t16:31749454-34012168;16:32055083-33851279;16:32123333-33664028;16:32345385-33344188;16:32511180-33912324;16:33204449-33378738;16:33230271-33739925\t0.3314\tDDD:47058;DDD:47062;DDD:47113;DDD:47114;dgv50e203\t16:31749454-34012168;16:32055083-33851279;16:32123333-33664028;16:33204449-33378738;16:33230271-33739925\t0.1243\t\t\t\tIMH\t16:24121264-80276578;16:29238285-88227116;16:32354183-33512427;16:32354247-33512560\t0.4996\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t92.24\t\t\t\t\t\t\t\t\t\t729355\tHGNC:37202\t\t\t\t\t\t\t\t\t\t\tfull=1\n16_32471626_33487672_DEL_1\t16\t32471626\t33487672\t-1016047\tDEL\t\tBenign\tNA\tsplit\tp11.2\tLOC107987386\t\t\t\tNR_171660\t1\t33298270\t33319296\t21026\t0\t0\tNA\t5\ttxStart-txEnd\tUTR\t\t\t33298270\t33319296\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tDDD:47058;DDD:47062;DDD:47113;DDD:47114;DDD:47116;IMH;dgv50e203;dgv821e212\t16:31749454-34012168;16:32055083-33851279;16:32123333-33664028;16:32345385-33344188;16:32511180-33912324;16:33204449-33378738;16:33230271-33739925;16:33270420-33827235\t0.5150\tDDD:47058;DDD:47062;DDD:47113;DDD:47114;dgv50e203\t16:31749454-34012168;16:32055083-33851279;16:32123333-33664028;16:33204449-33378738;16:33230271-33739925\t0.1243\t\t\t\tIMH\t16:24121264-80276578;16:29238285-88227116;16:32354183-33512427;16:32354247-33512560\t0.4996\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tfull=1\n16_34493207_34702366_DUP_1\t16\t34493207\t34702366\t209160\tDUP\t\tBenign\tNA\tfull\tp11.2-p11.1\tLINC01566\tLOC105371200\tFRG2DP\t1\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tdbVar:nssv15158812;dbVar:nssv15148703;dbVar:nssv15150639;nssv15151292;dbVar:nssv15158813;dbVar:nssv15158224;dbVar:nssv15133058;dbVar:nssv15126469;dbVar:nssv15150356\t16:61452-90294632;16:69194-90274381;16:85882-90155062;16:88166-90163275;16:88166-90274695;16:30703234-35147508;16:31986099-90294753;16:34197493-64509054\t0.23;0.23;0.23;0.23;0.23;4.71;0.36;0.69\t\t\t\t\t\t\t\t1000g;DDD:47173;DDD:47179;TS40:ISCA-37481;dgv117e55;dgv2962n100;dgv51e203;dgv824e212;esv2421698;esv3638500;gnomAD-SV_v2.1_DUP_16_42078;nsv514804;nsv516385\t16:34197352-35283226;16:34202089-35147508;16:34259806-34805859;16:34410570-34796531;16:34441796-34784591;16:34445084-34774280;16:34456525-34736855;16:34457086-34712399;16:34457086-34712399;16:34465000-34757000;16:34470705-34757071;16:34471852-34731191;16:34476781-34747070\t0.1875\tHI40:ISCA-37481;dbVar\t16:34202089-35147508;chr16:34457085-34712399\t0.01\t\t\t\tIMH\t16:24121264-80276578;16:29238285-88227116;16:34180655-46447887;16:34188883-46442460\t0.4996\t\t\t16:34202089-35147508 TS40:ISCA-37481;16:34410570-34796531 dgv117e55;16:34445084-34774280 dgv824e212;16:34457086-34712399 1000g;16:34465000-34757000 gnomAD-SV_v2.1_DUP_16_42078;16:34471852-34731191 nsv514804;16:34567146-34656231 DDD:47183;\t16:34197352-35283226 dgv51e203;16:34259806-34805859 nsv516385;16:34441796-34784591 dgv2962n100;16:34456525-34736855 DDD:47173;16:34457086-34712399 esv3638500;16:34470705-34757071 esv2421698;16:34476781-34747070 DDD:47179;16:34572795-34661165 gnomAD-SV_v2.1_DUP_16_42081\t\t\tchr16:34457085-34712399 dbVar;chr16:34513700-34518239 dbVar;chr16:34521342-34521422 dbVar;chr16:34530127-34530478 dbVar;chr16:34539678-34540320 dbVar;chr16:34563433-34571562 dbVar;chr16:34590029-34590133 dbVar;chr16:34590961-34591436 dbVar;chr16:34604209-34604282 dbVar;chr16:34659877-34659999 dbVar;chr16:34666766-34667080 dbVar;chr16:34687510-34703789 dbVar\t16:34202089-35147508 HI40:ISCA-37481;chr16:34502223-34502386 dbVar;chr16:34515750-34515813 dbVar;chr16:34530038-34530588 dbVar;chr16:34539652-34540292 dbVar;16:34539693-34540322 DDD:47181;chr16:34568138-34568693 dbVar;chr16:34590565-34590648 dbVar;chr16:34600723-34610152 dbVar;chr16:34655648-34655724 dbVar;chr16:34664288-34664480 dbVar;chr16:34684662-34685228 dbVar\t0.385\t0.335\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t-1.0\t1A (cf Gene_count, RE_gene, +0.00);2D (cf B_gain_source, -1.00);2B (cf po_P_gain_source, TS, OMIM_morbid, +0.00);3A (1 gene, +0.00);4O (cf po_B_gain_AllG_source, B_gain_source, po_B_gain_SomeG_source, +0.00);5F (+0.00)\t1\n16_34493207_34702366_DUP_1\t16\t34493207\t34702366\t209160\tDUP\t\tBenign\tNA\tsplit\tp11.2-p11.1\tLINC01566\t\t\t\tNR_027080\t2\t34597786\t34626084\t28298\t0\t0\tNA\t7\ttxStart-txEnd\tUTR\t\t\t34597786\t34626084\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t1000g;DDD:47173;DDD:47179;DDD:47183;TS40:ISCA-37481;dgv117e55;dgv2962n100;dgv51e203;dgv824e212;esv2421698;esv3638500;gnomAD-SV_v2.1_DUP_16_42078;gnomAD-SV_v2.1_DUP_16_42081;nsv514804;nsv516385\t16:34197352-35283226;16:34202089-35147508;16:34259806-34805859;16:34410570-34796531;16:34441796-34784591;16:34445084-34774280;16:34456525-34736855;16:34457086-34712399;16:34457086-34712399;16:34465000-34757000;16:34470705-34757071;16:34471852-34731191;16:34476781-34747070;16:34567146-34656231;16:34572795-34661165\t0.1875\tHI40:ISCA-37481;dbVar\t16:34202089-35147508;chr16:34457085-34712399\t0.01\t\t\t\tIMH\t16:24121264-80276578;16:29238285-88227116;16:34180655-46447887;16:34188883-46442460\t0.4996\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t283914\tHGNC:27555\t\t\t\t\t\t\t\t\t\t\tfull=1\n17_34437476_34817481_DUP_1\t17\t34437476\t34817481\t380006\tDUP\t\tBenign\tNA\tfull\tq12\tTBC1D3B;CCL3L3;CCL4L2;TBC1D3D;CCL3L1;TBC1D3H;TBC1D3F\tCCL4\tZNHIT3\t7\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tPEX12 (morbid/RE=GH_enhancer);PIGW (morbid/RE=EA_enhancer);ZNHIT3 (morbid/RE=ABC_enhancer+GH_enhancer)\t\t\t\t\t\t\t\t\t\t\t\t\t17q12 recurrent (RCAD syndrome) region (includes HNF1B)\t\tdbVar:nssv15149908;nssv15152170;dbVar:nssv15159024;dbVar:nssv15160732;dbVar:nssv15159027;dbVar:nssv15127236;dbVar:nssv15775117;dbVar:nssv15132421;dbVar:nssv15132422;dbVar:nssv15155541;dbVar:nssv18330713;dbVar:nssv15155542;dbVar:nssv15605916;dbVar:nssv16736632;dbVar:nssv15138685;dbVar:nssv15142873;dbVar:nssv15141421;dbVar:nssv15132229;nssv15139703;dbVar:nssv15125411;dbVar:nssv15125622;dbVar:nssv15130152;nssv15132345;nssv15139691;dbVar:nssv15135915;dbVar:nssv15124805;dbVar:nssv18842005;TS3:ISCA-37432;dbVar:nssv15132164;dbVar:nssv17649867;dbVar:nssv16215252;dbVar:nssv15123756;dbVar:nssv15133519;dbVar:nssv16736603;dbVar:nssv15135870\t17:527-81041938;17:7215-81058310;17:8548-81060040;17:12345-81057996;17:16757564-81048189;17:21690654-38772647;17:34310999-36297053;17:34360169-36209228;17:34425363-36283612;17:34425364-36404555;17:34426245-36225988;17:34437476-36214026;17:34437476-36243028;17:34437483-36244358;17:34437483-36350584;17:34437483-36404555;17:34508118-36248918;17:34526602-36188734;17:34604365-36231917;17:34611353-36248918;17:34611353-36263019;17:34750819-36354738;17:34752222-36105007;17:34815073-36192489;17:34815185-36209228;17:34815467-36249366;17:34815552-36244358;17:34815552-36249800;17:34817423-36173763;17:34817423-36243028;17:34817423-36248918\t0.47;0.47;0.47;0.47;0.59;2.22;19.13;20.55;20.45;19.20;21.11;21.39;21.05;21.03;19.86;19.32;17.77;17.50;13.09;12.59;12.48;4.16;4.82;0.17;0.16;0.14;0.14;0.13;0.00;0.00;0.00\t17q12 recurrent (RCAD syndrome) region (includes HNF1B)\t\tdbVar:nssv18830976;dbVar:nssv15137372;dbVar:nssv8639331;dbVar:nssv15142228;dbVar:nssv15133035;dbVar:nssv17976904;dbVar:nssv15142015;dbVar:nssv15153182;dbVar:nssv15153183;dbVar:nssv15133261;dbVar:nssv15124226;dbVar:nssv15132100;nssv15139544;dbVar:nssv15127168;dbVar:nssv15133024;dbVar:nssv17955818;HI3:ISCA-37432;dbVar:nssv15149164;dbVar:nssv15129143;dbVar:nssv15130784;nssv15172799;dbVar:nssv15173493;dbVar:nssv15131818;dbVar:nssv15135737;dbVar:nssv15135591;dbVar:nssv15134619\t17:30572863-35843988;17:34360169-36248859;17:34360228-36473024;17:34447114-36283612;17:34450406-36248918;17:34463924-36410559;17:34475680-36283612;17:34475680-36311009;17:34477386-36404555;17:34508118-36173763;17:34604365-36188734;17:34611353-36248918;17:34750819-81048189;17:34768967-36263019;17:34807070-36284994;17:34815073-36192489;17:34815073-36192492;17:34815552-36208392;17:34815552-36244358;17:34815552-36307189;17:34817423-36168104;17:34817423-36188700;17:34817423-36248918;17:34817423-36263019\t7.21;20.12;17.99;20.17;20.41;18.16;18.91;18.62;17.65;18.57;13.45;12.59;0.14;3.25;0.70;0.17;0.17;0.14;0.14;0.13;0.00;0.00;0.00;0.00\t\t\tdgv122e55\t17:34426246-34870708\t0.0300\t\t\t\t\t\t\tIMH\t17:30436599-65922464;17:32367054-60556542;17:32367223-60556516;17:32367435-60556508\t0.2252\t\t\t17:34416412-34496071 nsv514836;17:34424712-34477480 dgv908e212;17:34426246-34870708 dgv122e55;17:34435513-34485079 dgv3148n100;17:34435674-34621060 DDD:49237;17:34436100-34482872 1000g;17:34436438-34780239 DDD:49240;17:34437483-34477480 dgv910e212;17:34502930-34524195 nsv514837;17:34517741-34540630 DDD:49256;17:34580927-34587273 DDD:49263;17:34625755-34641426 DDD:49271;17:34750173-34796456 DDD:49284;\t17:34387632-34629696 esv2762388;17:34416538-34629684 dgv3144n100;17:34425364-34477387 dgv121e55;17:34431132-34484342 DDD:49235;17:34435513-34629696 esv2760467;17:34436100-34482872 1000g;17:34436100-34482872 dgv572e214;17:34437129-34485091 esv2421587;17:34443777-34537005 DDD:49243;17:34502941-34524192 TS40:ISCA-46706;17:34538648-34540293 nsv514838;17:34610042-34641487 nsv514839;17:34746065-34746521 DDD:49283;17:34800000-34914000 gnomAD-SV_v2.1_DUP_17_43954\t\t\t17:34438323-34449809 DDD:49242;chr17:34445826-34446140 dbVar;17:34508446-34554792 dgv545e199;17:34517741-34540630 DDD:49256;chr17:34540766-34540825 dbVar;17:34580927-34587273 DDD:49263;17:34625755-34641426 DDD:49271;chr17:34642332-34642392 dbVar;17:34702019-34702094 DDD:49280;17:34762644-34775639 DDD:49288;chr17:34812000-36251000 dbVar\t17:34436438-34780239 DDD:49240;17:34443777-34537005 DDD:49243;17:34446621-34447535 DDD:49246;17:34509780-34551554 HI40:ISCA-46698;chr17:34528205-34528314 dbVar;17:34540766-34540825 gnomAD-SV_v2.1_DEL_17_159956;17:34591446-34670592 dgv546e199;chr17:34629804-34629885 dbVar;17:34642332-34642392 gnomAD-SV_v2.1_DEL_17_159958;17:34750173-34796456 DDD:49284;chr17:34808750-34815000 dbVar\t0.435\t0.515\t17:34437545-34437861\t7SLRNA\t\t\t\t\t17:34405992-34437446;17:34405992-34437446\t\t\t\t\t\t\t\t\t94.43\t\t\t\t2.42746656950142\t2.41694262394586\t\t\t\t\t\t\t\t\t\t\tyes\t7\t3.1517e-01\t6.3692e-01\t-1.0\t1A (cf Gene_count, RE_gene, +0.00);2D (cf B_gain_source, -1.00);2B (cf po_P_gain_source, TS, OMIM_morbid, +0.00);3A (7 genes, +0.00);4O (cf po_B_gain_AllG_source, B_gain_source, po_B_gain_SomeG_source, +0.00);5F (+0.00)\t1\n17_34437476_34817481_DUP_1\t17\t34437476\t34817481\t380006\tDUP\t\tBenign\tNA\tsplit\tq12\tTBC1D3B\t\t\t\tNM_001001417\t7\t34493062\t34503996\t10934\t1650\t100\tno\t14\ttxStart-txEnd\t5'UTR-3'UTR\t\t\t34493062\t34503996\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tDDD:49237;DDD:49240;DDD:49243;dgv122e55;dgv3144n100;esv2760467;esv2762388\t17:34387632-34629696;17:34416538-34629684;17:34426246-34870708;17:34435513-34629696;17:34435674-34621060;17:34436438-34780239;17:34443777-34537005\t0.1041\tDDD:49240;DDD:49243\t17:34436438-34780239;17:34443777-34537005\t0.0982\t\t\t\tIMH\t17:30436599-65922464;17:32367054-60556542;17:32367223-60556516;17:32367435-60556508\t0.2252\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t94.43\t\t\t\t2.42746656950142\t2.41694262394586\t\t\t\t\t414059\tHGNC:27011\t\t\t\t\t\t7\t2.1949e-01\t6.3692e-01\t\t\tfull=1\n17_34437476_34817481_DUP_1\t17\t34437476\t34817481\t380006\tDUP\t\tBenign\tNA\tsplit\tq12\tCCL3L3\t\t\t\tNM_001001437\t4\t34522267\t34524157\t1890\t282\t100\tno\t3\ttxStart-txEnd\t5'UTR-3'UTR\t\t\t34522267\t34524157\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tDDD:49237;DDD:49240;DDD:49243;DDD:49256;TS40:ISCA-46706;dgv122e55;dgv3144n100;esv2760467;esv2762388;nsv514837\t17:34387632-34629696;17:34416538-34629684;17:34426246-34870708;17:34435513-34629696;17:34435674-34621060;17:34436438-34780239;17:34443777-34537005;17:34502930-34524195;17:34502941-34524192;17:34517741-34540630\t0.1041\tDDD:49240;DDD:49243;DDD:49256;HI40:ISCA-46698;dgv545e199\t17:34436438-34780239;17:34443777-34537005;17:34508446-34554792;17:34509780-34551554;17:34517741-34540630\t0.1500\t\t\t\tIMH\t17:30436599-65922464;17:32367054-60556542;17:32367223-60556516;17:32367435-60556508\t0.2252\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t88.85\t\t\t\t\t\t\t\t\t\t414062\tHGNC:30554\t\t\t\t\t\t9\t3.1517e-01\t\t\t\tfull=1\n17_34437476_34817481_DUP_1\t17\t34437476\t34817481\t380006\tDUP\t\tBenign\tNA\tsplit\tq12\tCCL4L2\t\t\t\tNM_001291471\t2\t34538464\t34540275\t1811\t312\t100\tno\t3\ttxStart-txEnd\t5'UTR-3'UTR\t\t\t34538464\t34540275\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tDDD:49237;DDD:49240;DDD:49256;dgv122e55;dgv3144n100;esv2760467;esv2762388\t17:34387632-34629696;17:34416538-34629684;17:34426246-34870708;17:34435513-34629696;17:34435674-34621060;17:34436438-34780239;17:34517741-34540630\t0.0994\tDDD:49240;DDD:49256;HI40:ISCA-46698;dgv545e199\t17:34436438-34780239;17:34508446-34554792;17:34509780-34551554;17:34517741-34540630\t0.1500\t\t\t\tIMH\t17:30436599-65922464;17:32367054-60556542;17:32367223-60556516;17:32367435-60556508\t0.2252\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t84.65\t\t\t\t1.02068766819866\t1.31010018701924\t\t\t\t\t9560\tHGNC:24066\t\t\t\t\t\t9\t8.8586e-02\t4.8994e-01\t\t\tfull=1\n17_34437476_34817481_DUP_1\t17\t34437476\t34817481\t380006\tDUP\t\tBenign\tNA\tsplit\tq12\tTBC1D3D\t\t\t\tNM_001291465\t2\t34581084\t34592039\t10955\t1650\t100\tno\t14\ttxStart-txEnd\t5'UTR-3'UTR\t\t\t34581084\t34592039\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tDDD:49237;DDD:49240;dgv122e55;dgv3144n100;esv2760467;esv2762388\t17:34387632-34629696;17:34416538-34629684;17:34426246-34870708;17:34435513-34629696;17:34435674-34621060;17:34436438-34780239\t0.0994\tDDD:49240\t17:34436438-34780239\t0.0982\t\t\t\tIMH\t17:30436599-65922464;17:32367054-60556542;17:32367223-60556516;17:32367435-60556508\t0.2252\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t101060389\tHGNC:28944\t\t\t\t\t\t\t\t\t\t\tfull=1\n17_34437476_34817481_DUP_1\t17\t34437476\t34817481\t380006\tDUP\t\tBenign\tNA\tsplit\tq12\tCCL3L1\t\t\t\tNM_021006\t6\t34623841\t34625731\t1890\t282\t100\tno\t3\ttxStart-txEnd\t5'UTR-3'UTR\t\t\t34623841\t34625731\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tDDD:49240;dgv122e55;dgv3144n100;esv2760467;esv2762388;nsv514839\t17:34387632-34629696;17:34416538-34629684;17:34426246-34870708;17:34435513-34629696;17:34436438-34780239;17:34610042-34641487\t0.0994\tDDD:49240;dgv546e199\t17:34436438-34780239;17:34591446-34670592\t0.1000\t\t\t\tIMH\t17:30436599-65922464;17:32367054-60556542;17:32367223-60556516;17:32367435-60556508\t0.2252\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t88.49\t\t\t\t\t\t\t\t\t\t6349\tHGNC:10628\t\t\t\t\tyes\t9\t1.2057e-01\t\t\t\tfull=1\n17_34437476_34817481_DUP_1\t17\t34437476\t34817481\t380006\tDUP\t\tBenign\tNA\tsplit\tq12\tTBC1D3H\t\t\t\tNM_001123392\t4\t34746118\t34757005\t10887\t1650\t100\tno\t14\ttxStart-txEnd\t5'UTR-3'UTR\t\t\t34746118\t34757005\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tDDD:49240;dgv122e55\t17:34426246-34870708;17:34436438-34780239\t0.0994\tDDD:49240\t17:34436438-34780239\t0.0982\t\t\t\tIMH\t17:30436599-65922464;17:32367054-60556542;17:32367223-60556516;17:32367435-60556508\t0.2252\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t93.12\t\t\t\t\t\t\t\t\t\t729877\tHGNC:30708\t\t\t\t\t\t\t\t\t\t\tfull=1\n17_34437476_34817481_DUP_1\t17\t34437476\t34817481\t380006\tDUP\t\tBenign\tNA\tsplit\tq12\tTBC1D3F\t\t\t\tNM_032258\t5\t34797171\t34808058\t10887\t1650\t100\tno\t14\ttxStart-txEnd\t5'UTR-3'UTR\t\t\t34797171\t34808058\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tdgv122e55\t17:34426246-34870708\t0.0300\t\t\t\t\t\t\tIMH\t17:30436599-65922464;17:32367054-60556542;17:32367223-60556516;17:32367435-60556508\t0.2252\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t93.73\t\t\t\t1.8673923772413\t2.14567117504116\t\t\t\t\t84218\tHGNC:18257\t\t\t\t\t\t9\t1.3666e-05\t6.2038e-01\t\t\tfull=1\n17_44171889_44297143_DUP_1\t17\t44171889\t44297143\t125255\tDUP\t\tBenign\tNA\tfull\tq21.31\tKANSL1;KANSL1-AS1\tSTH\tARL17B\t2\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tGOSR2 (morbid/RE=ABC_enhancer+GH_enhancer);MAPT (morbid/RE=ABC_enhancer);NSF (morbid/RE=EA_enhancer);PLEKHM1 (morbid/RE=ABC_enhancer)\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tdbVar:nssv15149908;nssv15152170;dbVar:nssv15159024;dbVar:nssv15160732;dbVar:nssv15159027;dbVar:nssv15127236;dbVar:nssv15149626;dbVar:nssv15150382;dbVar:nssv16207328;dbVar:nssv15141990\t17:527-81041938;17:7215-81058310;17:8548-81060040;17:12345-81057996;17:16757564-81048189;17:42580685-81085615;17:43655357-44292742;17:43655357-44784639;17:43710151-44292742\t0.15;0.15;0.15;0.15;0.19;0.33;18.96;11.09;20.74\tKoolen-De Vries syndrome, 610443 (3) AD\t\tdbVar:nssv15127168;dbVar:nssv16215146;dbVar:nssv15141350;dbVar:nssv16254531;dbVar:nssv15124147;dbVar:nssv15135761;dbVar:nssv15137490;dbVar:nssv18330259;dbVar:nssv15129570;dbVar:nssv15138300;dbVar:nssv15137112;dbVar:nssv15132122;dbVar:nssv15132318;nssv15133093;dbVar:nssv15135170;dbVar:nssv15132284;nssv15139974;dbVar:nssv15136771;dbVar:nssv15136778;dbVar:nssv15132380;dbVar:nssv15173411;dbVar:nssv18329240;dbVar:nssv15133422;dbVar:nssv15143597;nssv15155552;dbVar:nssv15138826;dbVar:nssv15142266;nssv17976955;nssv18326376;dbVar:nssv15173506;dbVar:nssv15136011;dbVar:nssv15133428;dbVar:nssv15132370;nssv15140010;dbVar:nssv15132745;dbVar:nssv16091744;dbVar:nssv15135222;dbVar:nssv15161495;dbVar:nssv15129007;dbVar:nssv15152077;dbVar:nssv15132384;dbVar:nssv15136234;dbVar:nssv15132385;dbVar:nssv15133429;morbid:KANSL1;HI3:KANSL1;dbVar:nssv16252231\t17:34750819-81048189;17:43559852-44248220;17:43585761-44248995;17:43586397-44212416;17:43592411-44249054;17:43593477-44224221;17:43622198-44201470;17:43622198-44212416;17:43629216-44399455;17:43648492-44214888;17:43651732-44351152;17:43653228-44351644;17:43655748-44176717;17:43655748-44224221;17:43655748-44351152;17:43656694-44176717;17:43656694-44694311;17:43675409-44351152;17:43685926-44212727;17:43693539-44212416;17:43693608-44176717;17:43703801-44212416;17:43703802-44187492;17:43703802-44212416;17:43705602-44208333;17:43706887-44171947;17:43706887-44176171;17:43706887-44176717;17:43706887-44207977;17:43706887-44210822;17:43706887-44351152;17:43706887-44694283;17:43706896-44762543;17:43710371-44212416;17:43715081-44176717;17:43717704-44345038;17:43717704-44351152;17:43751675-44351152;17:44107282-44302733;17:44107283-44302733;17:44174220-44481307\t0.27;11.09;11.63;6.47;11.75;8.30;5.11;6.87;16.26;7.59;17.91;17.93;0.93;9.21;18.01;0.93;12.07;18.54;7.75;7.81;1.00;7.97;3.23;7.97;7.25;0.01;0.91;1.03;7.20;7.73;19.44;12.69;11.87;8.07;1.05;19.97;19.77;20.89;64.08;64.09;40.03\t26\tInborn_genetic_diseases;Intellectual_disability;Koolen-de_Vries_syndrome;Neurodevelopmental_delay;not_specified\tDDD:49604;IMH;dgv127e55;dgv128e55;dgv3181n100;esv2422002;esv2762433;nsv516807\t17:43574135-44788194;17:43655786-44366714;17:44004973-44811116;17:44094472-44364056;17:44109475-44793283;17:44145590-44364158;17:44165804-44362009;17:44170038-44744285\t0.1700\tesv2762433\t17:43574135-44788194\t0.0700\t\t\t\tIMH\t17:30436599-65922464;17:32367054-60556542;17:32367223-60556516;17:32367435-60556508;17:43662689-44338152;17:43664434-44336296;17:43681870-44318931\t0.2252\t\t\t17:43655786-44366714 IMH;17:44094472-44364056 dgv128e55;17:44145590-44364158 dgv3181n100;17:44163926-44293020 dgv367n27;17:44165339-44211686 1000g;17:44165339-44211686 dgv575e214;17:44165804-44362009 esv2422002;17:44170285-44212803 DDD:49606;17:44176395-44176717 1000g;17:44187493-44214094 dgv937e212;17:44187493-44364056 dgv130e55;17:44194107-44762405 DDD:49611;17:44209763-44267388 DDD:49612;17:44212745-44369562 gnomAD-SV_v2.1_DUP_17_44188;17:44223908-44224221 1000g;17:44230894-44262697 1000g;17:44249111-44320939 DDD:49618;17:44282756-44286423 IMH;\t17:43574135-44788194 esv2762433;17:44004973-44811116 dgv127e55;17:44109475-44793283 nsv516807;17:44149791-44248860 DDD:49602;17:44165000-44217000 gnomAD-SV_v2.1_DUP_17_44187;17:44165339-44211686 1000g;17:44165703-44291551 nsv514850;17:44170038-44744285 DDD:49604;17:44175518-44443972 DDD:49608;17:44176859-44397890 DDD:49609;17:44187493-44292742 dgv938e212;17:44187493-44789621 dgv939e212;17:44208145-44764994 esv2760451;17:44212647-44369642 IMH;17:44212825-44276618 dgv943e212;17:44230894-44262697 1000g;17:44230894-44262697 dgv576e214;17:44280980-44369559 DDD:49623;17:44283572-44782177 esv3893020\t\t\t17:44170285-44212803 DDD:49606;chr17:44176395-44176717 dbVar;chr17:44176407-44176807 dbVar;17:44176859-44397890 DDD:49609;17:44190672-44785015 dgv940e212;chr17:44192997-44193064 dbVar;17:44208145-44764994 esv2760451;chr17:44223760-44224221 dbVar;17:44223908-44224221 1000g;17:44223908-44224221 esv2662030;chr17:44265262-44265312 dbVar;\t17:43574135-44788194 esv2762433;17:44176395-44176717 1000g;17:44176395-44176717 esv2675570;17:44176407-44176807 gnomAD-SV_v2.1_DEL_17_160649;chr17:44179666-44182382 dbVar;chr17:44192422-44192507 dbVar;17:44194107-44762405 DDD:49611;17:44212311-44292742 dgv941e212;17:44223760-44224221 gnomAD-SV_v2.1_DEL_17_160652;chr17:44223908-44224221 dbVar;chr17:44256597-44256681 dbVar;chr17:44278890-44279167 dbVar\t0.380\t0.460\t\t\t17:44297188-44297495\tAluY\t\t\t17:44164882-44183555\t17:44294406-44329730\t\t\t\t\t\t3\t\t16.23\t\t\t\t-0.71959827485963\t0.443929223699058\t\t\t\t\t\t\t612452\t\t\tyes\t\t0\t9.9972e-01\t9.9973e-01\t-1.0\t1A (cf Gene_count, RE_gene, +0.00);2D (cf B_gain_source, -1.00);2B (cf po_P_gain_source, TS, OMIM_morbid, +0.00);2E (cf B_gain_source, +0.00);2I-3 (KANSL1, +0.00);3A (2 genes, +0.00);4O (cf po_B_gain_AllG_source, B_gain_source, po_B_gain_SomeG_source, +0.00);5F (+0.00)\t1\n17_44171889_44297143_DUP_1\t17\t44171889\t44297143\t125255\tDUP\t\tBenign\tNA\tsplit\tq21.31\tKANSL1\t\t\t\tNM_001405854\t1\t44107281\t44302125\t125255\t1431\t43\tno\t16\tintron2-intron4\t5'UTR-CDS\t37\t5'\t44171888\t44297143\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t26\tInborn_genetic_diseases;Intellectual_disability;Koolen-de_Vries_syndrome;Neurodevelopmental_delay;not_specified\tDDD:49604;IMH;dgv127e55;dgv128e55;dgv3181n100;esv2422002;esv2762433;nsv516807\t17:43574135-44788194;17:43655786-44366714;17:44004973-44811116;17:44094472-44364056;17:44109475-44793283;17:44145590-44364158;17:44165804-44362009;17:44170038-44744285\t0.1700\tesv2762433\t17:43574135-44788194\t0.0700\t\t\t\tIMH\t17:30436599-65922464;17:32367054-60556542;17:32367223-60556516;17:32367435-60556508;17:43662689-44338152;17:43664434-44336296;17:43681870-44318931\t0.2252\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t3\t0\t16.23\t\t\t\t-0.71959827485963\t0.443929223699058\tKoolen-de Vries syndrome;Koolen-de Vries syndrome due to a point mutation\tAD\tDefinitive;Strong;Supportive\t22544363;22544363[PMID]_22544367[PMID]_20301783[PMID];22544367\t284058\tHGNC:24565\t612452\tKoolen-De Vries syndrome, 610443 (3) AD\tAD\tyes\t\t0\t9.9972e-01\t9.9973e-01\t\t\tfull=1\n17_44171889_44297143_DUP_1\t17\t44171889\t44297143\t125255\tDUP\t\tBenign\tNA\tsplit\tq21.31\tKANSL1-AS1\t\t\t\tNR_034172\t1\t44270938\t44274089\t3151\t0\t0\tNA\t2\ttxStart-txEnd\tUTR\t\t\t44270938\t44274089\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tDDD:49604;DDD:49608;DDD:49609;DDD:49611;DDD:49618;IMH;dgv127e55;dgv128e55;dgv130e55;dgv3181n100;dgv367n27;dgv938e212;dgv939e212;dgv943e212;esv2422002;esv2760451;esv2762433;gnomAD-SV_v2.1_DUP_17_44188;nsv514850;nsv516807\t17:43574135-44788194;17:43655786-44366714;17:44004973-44811116;17:44094472-44364056;17:44109475-44793283;17:44145590-44364158;17:44163926-44293020;17:44165703-44291551;17:44165804-44362009;17:44170038-44744285;17:44175518-44443972;17:44176859-44397890;17:44187493-44292742;17:44187493-44364056;17:44187493-44789621;17:44194107-44762405;17:44208145-44764994;17:44212647-44369642;17:44212745-44369562;17:44212825-44276618;17:44249111-44320939\t0.5406\tDDD:49609;DDD:49611;dgv940e212;dgv941e212;esv2760451;esv2762433\t17:43574135-44788194;17:44176859-44397890;17:44190672-44785015;17:44194107-44762405;17:44208145-44764994;17:44212311-44292742\t0.2994\t\t\t\tIMH\t17:30436599-65922464;17:32367054-60556542;17:32367223-60556516;17:32367435-60556508;17:43662689-44338152;17:43664434-44336296;17:43681870-44318931;17:43702611-44296817\t0.2252\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t644246\tHGNC:43740\t\t\t\t\t\t\t\t\t\t\tfull=1\n2_242865921_243028452_DEL_1\t2\t242865921\t243028452\t-162532\tDEL\t\tBenign\tNA\tfull\tq37.3\tLINC01237;LINC01238;LOC285097;LINC01880\tFAM240C\tLINC03100\t4\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tAGXT (morbid/RE=ABC_enhancer);D2HGDH (morbid/RE=ABC_enhancer+EA_enhancer+GH_enhancer);DTYMK (morbid/RE=ABC_enhancer+EA_enhancer)\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tdbVar:nssv17976961;dbVar:nssv15174359;dbVar:nssv15174602;dbVar:nssv16254741;dbVar:nssv15147151;dbVar:nssv15147318;dbVar:nssv15146760;dbVar:nssv15121191;dbVar:nssv15134347;dbVar:nssv15120707;dbVar:nssv8639299\t2:2-243199373;2:14239-243048760;2:15673-243101834;2:178397960-243007457;2:189682922-243007359;2:211444401-243059659;2:218966483-243059659;2:228667865-243028452;2:236177413-243059659;2:236472309-243028452;2:239873382-243006013\t0.07;0.07;0.07;0.22;0.27;0.51;0.67;1.13;2.36;2.48;4.47\t2q37.3 terminal region (includes HDAC4)\t\tdbVar:nssv15124851;dbVar:nssv15132233;nssv15140017;dbVar:nssv16296940;dbVar:nssv15139807;dbVar:nssv15126959;dbVar:nssv15121136;dbVar:nssv15120661;dbVar:nssv15121139;dbVar:nssv15132363;dbVar:nssv15121140;dbVar:nssv15134903;dbVar:nssv15122404;dbVar:nssv15133611;dbVar:nssv15120667;dbVar:nssv16865882;dbVar:nssv15137653;dbVar:nssv15132686;dbVar:nssv17976287;dbVar:nssv15136836;dbVar:nssv15133934;dbVar:nssv15133750;dbVar:nssv15163370;dbVar:nssv15134792;dbVar:nssv15133170;dbVar:nssv15132355;dbVar:nssv15605955;dbVar:nssv15137339;dbVar:nssv15605956;dbVar:nssv18326326;dbVar:nssv15136036;dbVar:nssv15755694;HI3:ISCA-37394;dbVar:nssv15121144;dbVar:nssv15135054;dbVar:nssv15133743;dbVar:nssv15135857;dbVar:nssv15120673;dbVar:nssv15133620;dbVar:nssv15122695;dbVar:nssv15163383;dbVar:nssv16207882;dbVar:nssv15141519;dbVar:nssv15121145\t2:50886433-243102476;2:232634990-243059659;2:233110453-243028452;2:233784244-243040217;2:233891214-243068334;2:233995841-243028452;2:234362258-243041306;2:235081181-243028452;2:235254487-243059659;2:235576804-243059659;2:235744425-243007359;2:235937074-243008259;2:236177413-243007359;2:236649724-242974607;2:237201757-243048760;2:237322366-243059659;2:237463877-243059659;2:237619066-243048655;2:237684406-243059659;2:237875407-243007359;2:237943120-243007359;2:238037760-243101834;2:238140848-243007359;2:238434828-242938241;2:238552640-243059659;2:238795603-242918203;2:238811513-243059659;2:239071624-243048760;2:239229305-243199373;2:239742161-243059659;2:239894073-243048760;2:239954694-242930600;2:241006624-243028452;2:241006624-243059659;2:241110555-243007359;2:241127319-243059659;2:241384237-243028452;2:241446569-243007359;2:241610649-243034277;2:241847590-243101834;2:242011634-243199373;2:242045570-243040217;2:242188711-243028452\t0.08;1.56;1.64;1.76;1.77;1.80;1.87;2.05;2.08;2.17;1.95;2.01;2.07;1.72;2.78;2.83;2.90;2.99;3.02;2.76;2.79;3.21;2.91;1.61;3.61;1.27;3.83;4.09;4.09;4.90;5.15;2.17;8.04;7.92;7.46;8.41;9.89;9.06;11.42;12.96;13.68;16.34;19.35\t\t\t\t\t\tDDD:9221;DDD:9222;IMH;dbVar;gnomAD-SV_v2.1_DEL_2_28790\t2:242849685-243064401;chr2:242852582-243035504;chr2:242853252-243035778;2:242853252-243035778;2:242853253-243035778;2:242853253-243035778\t0.0686\t\t\t\t\t\t\t\t\t2:242930601-243102476 TS40:ISCA-37470;2:242988770-243037176 dgv768e214;2:243027554-243069648 dgv769e214;\t2:242869276-242871593 IMH;2:242988770-243037176 1000g;2:243027554-243069648 1000g;2:243028400-243028975 nsv514985\t\t\t2:242702555-243025545 DDD:9211;chr2:242851168-242874365 dbVar;2:242851169-242874365 esv3594848;chr2:242852582-243035504 dbVar;2:242852907-242902712 1000g;chr2:242853243-243019021 dbVar;2:242853244-243019021 esv3594850;2:242853252-243035778 gnomAD-SV_v2.1_DEL_2_28790;2:242853253-243035778 IMH;chr2:242860574-242892107 dbVar;2:242860575-242892107 esv3594851;2:242872863-243012181 HI40:ISCA-46585;chr2:242878551-242885258 dbVar;2:242881805-242896360 1000g;2:242881806-242896359 DDD:9229;chr2:242888545-242889711 dbVar;2:242890092-242926595 1000g;chr2:242895812-242954423 dbVar;2:242898343-242898462 1000g;chr2:242912279-242912530 dbVar...\t2:242516106-243014630 dgv165e55;2:242849685-243064401 DDD:9221;2:242851169-242874365 1000g;chr2:242852582-242959025 dbVar;chr2:242852906-242902712 dbVar;2:242852907-242902712 esv3594849;2:242853244-243019021 1000g;chr2:242853252-243035778 dbVar;2:242853253-243035778 DDD:9222;chr2:242854838-242867434 dbVar;2:242860575-242892107 1000g;2:242867313-242921118 DDD:9226;chr2:242874439-243024795 dbVar;chr2:242881804-242896360 dbVar;2:242881805-242896360 esv3594852;chr2:242887570-243070660 dbVar;chr2:242890091-242926595 dbVar;2:242890092-242926595 esv3594853;chr2:242898332-242898462 dbVar;chr2:242898343-242898462 dbVar...\t0.400\t0.460\t\t\t\t\t\t\t\t2:243007680-243062019\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t-1.0\t1A (cf Gene_count, RE_gene, +0.00);2F/4O (cf B_loss_source, -1.00);2B (cf po_P_loss_source, HI, OMIM_morbid, +0.00;3A (4 genes, +0.00);5F (+0.00)\t1\n2_242865921_243028452_DEL_1\t2\t242865921\t243028452\t-162532\tDEL\t\tBenign\tNA\tsplit\tq37.3\tLINC01237\t\t\t\tNR_110220\t1\t242823513\t243020873\t154953\t0\t0\tNA\t4\tintron2-txEnd\tUTR\t41134\t5'\t242865920\t243020873\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tDDD:9211;DDD:9221;DDD:9222;IMH;dbVar;gnomAD-SV_v2.1_DEL_2_28790\t2:242702555-243025545;2:242849685-243064401;chr2:242852582-243035504;chr2:242853252-243035778;2:242853252-243035778;2:242853253-243035778;2:242853253-243035778\t0.0686\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t101927289\tHGNC:49793\t\t\t\t\t\t\t\t\t\t\tfull=1\n2_242865921_243028452_DEL_1\t2\t242865921\t243028452\t-162532\tDEL\t\tBenign\tNA\tsplit\tq37.3\tLINC01238\t\t\t\tNR_110592\t1\t242912833\t242919427\t6594\t0\t0\tNA\t6\ttxStart-txEnd\tUTR\t\t\t242912833\t242919427\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t1000g;DDD:9211;DDD:9221;DDD:9222;DDD:9226;HI40:ISCA-46585;IMH;dbVar;dgv165e55;esv3594850;esv3594853;gnomAD-SV_v2.1_DEL_2_28790\t2:242516106-243014630;2:242702555-243025545;2:242849685-243064401;chr2:242852582-242959025;chr2:242852582-243035504;chr2:242853243-243019021;2:242853244-243019021;2:242853244-243019021;chr2:242853252-243035778;2:242853252-243035778;2:242853253-243035778;2:242853253-243035778;2:242867313-242921118;2:242872863-243012181;chr2:242874439-243024795;chr2:242887570-243070660;chr2:242890091-242926595;2:242890092-242926595;2:242890092-242926595;chr2:242895812-242954423\t0.0686\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t101927289\tHGNC:49793\t\t\t\t\t\t\t\t\t\t\tfull=1\n2_242865921_243028452_DEL_1\t2\t242865921\t243028452\t-162532\tDEL\t\tBenign\tNA\tsplit\tq37.3\tLOC285097\t\t\t\tNR_149023\t1\t242943359\t242948164\t4805\t0\t0\tNA\t1\ttxStart-txEnd\tUTR\t\t\t242943359\t242948164\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tTS40:ISCA-37470\t2:242930601-243102476\t\t1000g;DDD:9211;DDD:9221;DDD:9222;DDD:9231;DDD:9235;HI40:ISCA-37470;HI40:ISCA-46585;IMH;dbVar;dgv165e55;dgv167e55;dgv4203n100;dgv498n27;dgv90e203;esv3594850;esv3594855;gnomAD-SV_v2.1_DEL_2_28790\t2:242516106-243014630;2:242702555-243025545;2:242849685-243064401;chr2:242852582-242959025;chr2:242852582-243035504;chr2:242853243-243019021;2:242853244-243019021;2:242853244-243019021;chr2:242853252-243035778;2:242853252-243035778;2:242853253-243035778;2:242853253-243035778;2:242872863-243012181;chr2:242874439-243024795;chr2:242887570-243070660;chr2:242895812-242954423;2:242915455-243049013;2:242915467-243089456;2:242917307-243044147;chr2:242918208-242948232;2:242918249-243014630;chr2:242919210-242952227;2:242919211-242952227;2:242919211-242952227;2:242919289-242952148;2:242922232-243083979;2:242930601-243102476;chr2:242933537-242959025;chr2:242936128-242980024;chr2:242938726-242952779;chr2:242941934-242955439\t0.0804\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tfull=1\n2_242865921_243028452_DEL_1\t2\t242865921\t243028452\t-162532\tDEL\t\tBenign\tNA\tsplit\tq37.3\tLINC01880\t\t\t\tNR_146651\t1\t242989834\t243026289\t36455\t0\t0\tNA\t4\ttxStart-txEnd\tUTR\t\t\t242989834\t243026289\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t1000g;TS40:ISCA-37470;dgv768e214\t2:242930601-243102476;2:242988770-243037176;2:242988770-243037176\t0.0951\t1000g;DDD:9221;DDD:9222;DDD:9235;HI40:ISCA-37470;IMH;dbVar;dgv4203n100;dgv498n27;dgv90e203;esv3594857;esv3594864;gnomAD-SV_v2.1_DEL_2_28790\t2:242849685-243064401;chr2:242852582-243035504;chr2:242853252-243035778;2:242853252-243035778;2:242853253-243035778;2:242853253-243035778;chr2:242887570-243070660;2:242915455-243049013;2:242915467-243089456;2:242917307-243044147;2:242922232-243083979;2:242930601-243102476;chr2:242944058-243035710;2:242944059-243035710;2:242944059-243035710;chr2:242988769-243037176;2:242988770-243037176;2:242988770-243037176\t0.0804\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t105373979\tHGNC:52699\t\t\t\t\t\t\t\t\t\t\tfull=1\n3_195419169_195472855_DEL_1\t3\t195419169\t195472855\t-53687\tDEL\t\tBenign\tNA\tfull\tq29\tMIR570HG;MIR570;MUC20\tSDHAP2\tMUC4\t3\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tABCB7 (morbid/RE=mTL_miRNA);ABHD5 (morbid/RE=mTL_miRNA);ADAM22 (morbid/RE=mTL_miRNA);ANXA11 (morbid/RE=mTL_miRNA);ARL6IP1 (morbid/RE=mTL_miRNA);ATP6V1B2 (morbid/RE=mTL_miRNA);BICD2 (morbid/RE=mTL_miRNA);BLOC1S6 (morbid/RE=mTL_miRNA);BTD (morbid/RE=mTL_miRNA);CALM1 (morbid/RE=mTL_miRNA);CALM3 (morbid/RE=mTL_miRNA);CAVIN1 (morbid/RE=mTL_miRNA);CBFB (morbid/RE=mTL_miRNA);CCDC115 (morbid/RE=mTL_miRNA);CDKN1B (HI=3/morbid/RE=mTL_miRNA);CHD1 (morbid/RE=mTL_miRNA);CHSY1 (morbid/RE=mTL_miRNA);CLCN3 (morbid/RE=mTL_miRNA);CRTAP (morbid/RE=mTL_miRNA);CSNK2A1 (morbid/RE=mTL_miRNA);DDHD1 (morbid/RE=mTL_miRNA);ELOVL5 (morbid/RE=mTL_miRNA);EPG5 (morbid/RE=mTL_miRNA);ESCO2 (morbid/RE=mTL_miRNA);EXOC2 (morbid/RE=mTL_miRNA);FBXW7 (morbid/RE=mTL_miRNA);FTH1 (morbid/RE=mTL_miRNA);GDF6 (morbid/RE=mTL_miRNA);GSR (morbid/RE=mTL_miRNA);HNRNPA2B1 (morbid/RE=mTL_miRNA);IGF1R (HI=3/morbid/RE=mTL_miRNA);IL6R (morbid/RE=mTL_miRNA);IREB2 (morbid/RE=mTL_miRNA);KCNB1 (morbid/RE=mTL_miRNA);KLHL15 (morbid/RE=mTL_miRNA);KREMEN1 (morbid/RE=mTL_miRNA);LEMD2 (morbid/RE=mTL_miRNA);MRPL3 (morbid/RE=mTL_miRNA);MYO1C (morbid/RE=mTL_miRNA);NDRG1 (morbid/RE=mTL_miRNA);NDUFA12 (morbid/RE=mTL_miRNA);P3H2 (morbid/RE=mTL_miRNA);PAX2 (HI=3/morbid/RE=mTL_miRNA);PCYT1A (morbid/RE=GH_promoter_enhancer);PEX2 (morbid/RE=mTL_miRNA);PGK1 (morbid/RE=mTL_miRNA);PHF6 (HI=3/morbid/RE=mTL_miRNA);RAC1 (morbid/RE=mTL_miRNA);RNF168 (morbid/RE=GH_enhancer+GH_promoter_enhancer);SAMD12 (morbid/RE=mTL_miRNA)...\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tdbVar:nssv15162889;dbVar:nssv15164144;dbVar:nssv15149891;nssv15151839;dbVar:nssv15148025;dbVar:nssv15146977;dbVar:nssv15145927;dbVar:nssv15147555;dbVar:nssv15147518;dbVar:nssv15145707;dbVar:nssv15149548;dbVar:nssv15148262;dbVar:nssv15146719;dbVar:nssv18326383;dbVar:nssv15164224;dbVar:nssv15147464;dbVar:nssv15148839;dbVar:nssv15142547;dbVar:nssv15153539;dbVar:nssv17976740;dbVar:nssv15153542;dbVar:nssv15153544;dbVar:nssv15164241;dbVar:nssv15152868;dbVar:nssv15755821;dbVar:nssv15146377;dbVar:nssv15146980;dbVar:nssv15153546;dbVar:nssv15145873;dbVar:nssv15149008;dbVar:nssv15145905;dbVar:nssv15146981;dbVar:nssv16254509;dbVar:nssv16736615;dbVar:nssv15148110\t3:60175-197948027;3:61496-197838262;3:61893-197851986;3:103145727-197837049;3:147239680-197823436;3:151818302-197845254;3:155836231-197851986;3:156039668-197840323;3:157011168-197861598;3:158980632-197766890;3:165854998-197851986;3:167885357-197837049;3:171549422-198022430;3:173281267-197838262;3:175886314-197845254;3:176157700-197845254;3:177246494-197837049;3:182539235-197851986;3:183498521-197851986;3:184003968-197851986;3:186374366-197851986;3:186374672-197838262;3:187913568-197851986;3:188386567-197838262;3:188983161-197837049;3:190385453-197837049;3:191593620-197851986;3:192470727-197845254;3:193422395-197851986;3:194013987-197837069;3:194145226-197895629;3:195068029-197851986;3:195419169-197387258;3:195438670-197837049\t0.03;0.03;0.03;0.06;0.11;0.12;0.13;0.13;0.13;0.14;0.17;0.18;0.20;0.22;0.24;0.25;0.26;0.35;0.37;0.39;0.47;0.47;0.54;0.57;0.61;0.72;0.86;1.00;1.21;1.40;1.43;1.93;2.73;1.43\t\t\tdbVar:nssv15146266;dbVar:nssv15128822;dbVar:nssv15165459;dbVar:nssv17955845;dbVar:nssv17955930;dbVar:nssv15145831\t3:185203638-197837049;3:185599935-196462295;3:189101447-197838262;3:189608637-197532175;3:191866467-197842171;3:194059264-197420612\t0.42;0.49;0.61;0.68;0.90;1.60\t\t\tDDD:12528;TS40:ISCA-46592;esv2760775;esv2763776\t3:195240825-195502119;3:195376589-195493533;3:195383143-195502119;3:195385823-195474165\t0.0300\tDDD:12528;esv2760775;esv2763776\t3:195240825-195502119;3:195383143-195502119;3:195385823-195474165\t0.0300\t\t\t\tIMH\t3:195371562-197367616;3:195376259-197363816;3:195409822-195693354;3:195413625-195689159;3:195417390-195684632;3:195418302-195683569\t0.1142\t\t\t3:195320057-195470538 DDD:12519;3:195383143-195502119 esv2760775;3:195417631-195471708 DDD:12530;3:195417836-195445776 1000g;3:195417836-195445776 1000g;3:195428197-195442889 nsv515001;3:195452013-195457240 1000g;3:195454692-195475463 DDD:12537;3:195457142-195468593 1000g;3:195457142-195468593 dgv969e214\t3:195240825-195502119 esv2763776;3:195376589-195493533 TS40:ISCA-46592;3:195385823-195474165 DDD:12528;3:195417836-195445776 1000g;3:195417836-195445776 1000g;3:195417836-195445776 dgv967e214;3:195452013-195457240 1000g;3:195452013-195457240 dgv968e214;3:195457000-195471300 gnomAD-SV_v2.1_DUP_3_10621;3:195457142-195468593 1000g\t\t\t3:195320057-195470538 DDD:12519;3:195383131-195446910 dgv5017n100;3:195385823-195474165 DDD:12528;chr3:195425199-195425686 dbVar;3:195454692-195475463 DDD:12537;3:195457142-195471062 dgv970e214;chr3:195457317-195471062 dbVar;chr3:195463643-195463762 dbVar\t3:195240825-195502119 esv2763776;3:195380279-195469564 HI40:ISCA-46589;3:195383143-195502119 esv2760775;3:195417631-195471708 DDD:12530;chr3:195451991-195452447 dbVar;chr3:195457141-195468593 dbVar;3:195457249-195471074 dgv906e199;3:195457318-195471062 1000g\t0.470\t0.415\t3:195418975-195419071\tMER3\t\t\t\t\t3:195413607-195420395\t\t3:195341901-195476900\tHigh Signal Region\t3:195341901-195476900\tHigh Signal Region\t\t\t\t95.22\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t6\t4.7211e-03\t\t-1.0\t1A (cf Gene_count, RE_gene, +0.00);2F/4O (cf B_loss_source, -1.00);2B (cf po_P_loss_source, HI, OMIM_morbid, +0.00;3A (3 genes, +0.00);5F (+0.00)\t1\n3_195419169_195472855_DEL_1\t3\t195419169\t195472855\t-53687\tDEL\t\tBenign\tNA\tsplit\tq29\tMIR570HG\t\t\t\tNR_122105\t1\t195415368\t195438746\t19578\t0\t0\tNA\t5\tintron2-txEnd\tUTR\t2859\t5'\t195419168\t195438746\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t1000g;DDD:12519;DDD:12528;DDD:12530;TS40:ISCA-46592;dgv967e214;esv2760775;esv2763776\t3:195240825-195502119;3:195320057-195470538;3:195376589-195493533;3:195383143-195502119;3:195385823-195474165;3:195417631-195471708;3:195417836-195445776;3:195417836-195445776;3:195417836-195445776;3:195417836-195445776;3:195417836-195445776\t0.4682\tDDD:12519;DDD:12528;DDD:12530;HI40:ISCA-46589;dgv5017n100;esv2760775;esv2763776\t3:195240825-195502119;3:195320057-195470538;3:195380279-195469564;3:195383131-195446910;3:195383143-195502119;3:195385823-195474165;3:195417631-195471708\t0.0746\t\t\t\tIMH\t3:195371562-197367616;3:195376259-197363816;3:195409822-195693354;3:195413625-195689159;3:195417390-195684632;3:195418302-195683569\t0.1142\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t440993\tHGNC:53743\t\t\t\t\t\t\t\t\t\t\tfull=1\n3_195419169_195472855_DEL_1\t3\t195419169\t195472855\t-53687\tDEL\t\tBenign\tNA\tsplit\tq29\tMIR570\t\t\t\tNR_030296\t1\t195426271\t195426368\t97\t0\t0\tNA\t1\ttxStart-txEnd\tUTR\t\t\t195426271\t195426368\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t1000g;DDD:12519;DDD:12528;DDD:12530;TS40:ISCA-46592;dgv967e214;esv2760775;esv2763776\t3:195240825-195502119;3:195320057-195470538;3:195376589-195493533;3:195383143-195502119;3:195385823-195474165;3:195417631-195471708;3:195417836-195445776;3:195417836-195445776;3:195417836-195445776;3:195417836-195445776;3:195417836-195445776\t0.4682\tDDD:12519;DDD:12528;DDD:12530;HI40:ISCA-46589;dgv5017n100;esv2760775;esv2763776\t3:195240825-195502119;3:195320057-195470538;3:195380279-195469564;3:195383131-195446910;3:195383143-195502119;3:195385823-195474165;3:195417631-195471708\t0.0746\t\t\t\tIMH\t3:195371562-197367616;3:195376259-197363816;3:195409822-195693354;3:195413625-195689159;3:195417390-195684632;3:195418302-195683569\t0.1142\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t693155\tHGNC:32826\t\t\t\t\t\t\t\t\t\t\tfull=1\n3_195419169_195472855_DEL_1\t3\t195419169\t195472855\t-53687\tDEL\t\tBenign\tNA\tsplit\tq29\tMUC20\t\t\t\tNM_001282506\t2\t195447848\t195460422\t12574\t2130\t100\tno\t4\ttxStart-txEnd\t5'UTR-3'UTR\t\t\t195447848\t195460422\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tDDD:12519;DDD:12528;DDD:12530;TS40:ISCA-46592;esv2760775;esv2763776\t3:195240825-195502119;3:195320057-195470538;3:195376589-195493533;3:195383143-195502119;3:195385823-195474165;3:195417631-195471708\t0.0556\tDDD:12519;DDD:12528;DDD:12530;HI40:ISCA-46589;esv2760775;esv2763776\t3:195240825-195502119;3:195320057-195470538;3:195380279-195469564;3:195383143-195502119;3:195385823-195474165;3:195417631-195471708\t0.0746\t\t\t\tIMH\t3:195371562-197367616;3:195376259-197363816;3:195409822-195693354;3:195413625-195689159;3:195417390-195684632;3:195418302-195683569\t0.1142\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t95.22\t\t\t\t\t\t\t\t\t\t200958\tHGNC:23282\t\t\t\t\t\t6\t4.7211e-03\t\t\t\tfull=1\n4_69392546_69462438_DEL_1\t4\t69392546\t69462438\t-69893\tDEL\t\tBenign\tNA\tfull\tq13.2\tUGT2B17\tTMPRSS11E\tUGT2B15\t1\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tdbVar:nssv15165478;dbVar:nssv15148693;dbVar:nssv15165480;dbVar:nssv15164282;dbVar:nssv15149870;nssv15151360;dbVar:nssv15145710;dbVar:nssv17956560;dbVar:nssv15153593;dbVar:nssv15774461\t4:11526-191028879;4:12441-190904441;4:49451-190915650;4:49451-190963766;4:68347-190957473;4:52697789-98426769;4:52866945-143582507;4:64705502-73469716;4:68242785-82991431\t0.04;0.04;0.04;0.04;0.04;0.15;0.08;0.80;0.47\t\t\tdbVar:nssv17173265;dbVar:nssv15165214;dbVar:nssv15125766;dbVar:nssv17969950;dbVar:nssv15141158;dbVar:nssv15132956;dbVar:nssv15132546;dbVar:nssv15137205;dbVar:nssv18830797;dbVar:nssv16207960\t4:52757981-76930872;4:58332295-71587615;4:59167246-101910659;4:61867556-74711517;4:66017576-76772947;4:66320281-73179410;4:67708127-71697274;4:68665384-75106637;4:68698774-83637218;4:68950364-79738598\t0.29;0.53;0.16;0.54;0.65;1.02;1.75;1.09;0.47;0.65\t\t\tDDD:13999;dgv1490e212;dgv5262n100;dgv5264n100\t4:69360477-69485827;4:69364694-69524016;4:69371992-69489323;4:69371992-69540013\t0.4178\t1000g;DDD:13999;DDD:14001;DDD:14006;IMH;dbVar;dgv5262n100;dgv951e199;esv2421501;esv3600874;esv3893940;gnomAD-SV_v2.1_DEL_4_46338;nsv514223\t4:69364694-69524016;4:69367085-69542363;4:69371992-69489323;4:69372046-69491392;4:69373660-69491275;chr4:69373811-69491113;4:69373811-69491113;4:69374942-69503681;chr4:69375591-69491543;4:69375592-69491543;4:69375592-69491543;4:69380302-69491200;4:69382081-69512905;4:69386966-69483317\t0.8518\t\t\t\tIMH\t4:21758876-84442542;4:32219469-79170284\t0.1946\t\t\t4:69364694-69524016 DDD:13999;4:69371992-69489323 dgv5262n100;4:69435890-69485966 dgv1493e212;\t4:69360477-69485827 dgv1490e212;4:69366026-69430178 DDD:14000;4:69371992-69540013 dgv5264n100;4:69435890-69551731 dgv1495e212\t\t\t4:69364694-69524016 DDD:13999;4:69367085-69542363 DDD:14001;4:69372046-69491392 dgv951e199;chr4:69373747-69423167 dbVar;4:69373748-69423167 esv3600873;4:69373811-69491113 gnomAD-SV_v2.1_DEL_4_46338;4:69374942-69503681 esv2421501;4:69375592-69491543 1000g;4:69380302-69491200 DDD:14006;4:69386966-69483317 nsv514223;4:69426440-69454553 1000g;4:69435890-69485966 dgv1494e212;chr4:69441908-69442050 dbVar;\t4:69360489-69396466 DDD:13998;4:69366026-69430178 DDD:14000;4:69371992-69489323 dgv5262n100;4:69373660-69491275 IMH;4:69373748-69423167 1000g;chr4:69373811-69491113 dbVar;4:69374942-69396466 DDD:14004;chr4:69375591-69491543 dbVar;4:69375592-69491543 esv3600874;4:69382081-69512905 esv3893940;chr4:69426439-69454553 dbVar;4:69426440-69454553 esv3600875;4:69435890-69558258 dgv1496e212;chr4:69446429-69446529 dbVar\t0.400\t0.365\t4:69392108-69392544\tTigger2a\t4:69462528-69462751\tTHE1B\t\t\t4:69370649-69435791\t\t\t\t\t\t\t\t\t87.45\t\t\t\t0.741987855668132\t1.6951286981971\t\t\t\t\t\t\t601903\t\t\t\tyes\t5\t9.6905e-08\t1.0256e-02\t-1.0\t1A (cf Gene_count, RE_gene, +0.00);2F/4O (cf B_loss_source, -1.00);2B (cf po_P_loss_source, HI, OMIM_morbid, +0.00;3A (1 gene, +0.00);5F (+0.00)\t1\n4_69392546_69462438_DEL_1\t4\t69392546\t69462438\t-69893\tDEL\t\tBenign\tNA\tsplit\tq13.2\tUGT2B17\t\t\t\tNM_001077\t4\t69402890\t69442040\t39150\t1593\t100\tno\t7\ttxStart-txEnd\t5'UTR-3'UTR\t\t\t69402890\t69442040\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tDDD:13999;dgv1490e212;dgv5262n100;dgv5264n100\t4:69360477-69485827;4:69364694-69524016;4:69371992-69489323;4:69371992-69540013\t0.4178\t1000g;DDD:13999;DDD:14001;DDD:14006;IMH;dbVar;dgv5262n100;dgv951e199;esv2421501;esv3600874;esv3893940;gnomAD-SV_v2.1_DEL_4_46338;nsv514223\t4:69364694-69524016;4:69367085-69542363;4:69371992-69489323;4:69372046-69491392;4:69373660-69491275;chr4:69373811-69491113;4:69373811-69491113;4:69374942-69503681;chr4:69375591-69491543;4:69375592-69491543;4:69375592-69491543;4:69380302-69491200;4:69382081-69512905;4:69386966-69483317\t0.8518\t\t\t\tIMH\t4:21758876-84442542;4:32219469-79170284\t0.1946\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t87.45\t\t\t\t0.741987855668132\t1.6951286981971\t\t\t\t\t7367\tHGNC:12547\t601903\t(Bone mineral density QTL 12, osteoporosis), 612560 (3)\t\t\tyes\t5\t9.6905e-08\t1.0256e-02\t\t\tfull=1\n6_266080_362290_DEL_1\t6\t266080\t362290\t-96211\tDEL\t\tBenign\tNA\tfull\tp25.3\tDUSP22\tLINC03066\tIRF4\t1\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tEXOC2 (morbid/RE=ABC_enhancer+EA_enhancer+GH_promoter_enhancer);FOXC1 (HI=3/morbid/RE=ABC_enhancer);IRF4 (morbid/RE=ABC_enhancer+EA_enhancer+GH_enhancer+GH_promoter_enhancer)\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tdbVar:nssv15166690;dbVar:nssv15132417;dbVar:nssv15166692;dbVar:nssv15120571;dbVar:nssv17649861;dbVar:nssv15138806;dbVar:nssv15150238;dbVar:nssv15136852;dbVar:nssv15137715;dbVar:nssv15139508;dbVar:nssv15139953;dbVar:nssv15154408;dbVar:nssv15154409;dbVar:nssv15772668;dbVar:nssv15161578;dbVar:nssv15161859;nssv15161868;dbVar:nssv15132517;dbVar:nssv15133942;dbVar:nssv15135449;dbVar:nssv15131978;dbVar:nssv15168255;dbVar:nssv15124407;nssv15153178;dbVar:nssv15124483;dbVar:nssv16255328\t6:60108-171054786;6:106432-18360826;6:108667-170980171;6:144958-5239414;6:149620-3951208;6:152635-14417234;6:152635-15732394;6:152635-6027780;6:155808-17058645;6:156975-11551050;6:156975-13081433;6:156975-13502033;6:156975-21955964;6:156975-23221621;6:156975-46757028;6:156976-170919482;6:163084-1951585;6:163084-2029765;6:163084-9525729;6:164361-13340113;6:165633-170919470;6:168776-24023234;6:255351-3189972;6:302184-3290583\t0.06;0.53;0.06;1.89;2.53;0.67;0.62;1.64;0.57;0.84;0.74;0.72;0.44;0.42;0.21;0.06;5.38;5.15;1.03;0.73;0.06;0.40;3.28;2.01\t\t\tdbVar:nssv15127418;dbVar:nssv15133557;dbVar:nssv15168254;dbVar:nssv15134981;dbVar:nssv15135893;dbVar:nssv15139184;dbVar:nssv16254736;dbVar:nssv15139679;dbVar:nssv15151182;dbVar:nssv16208808;dbVar:nssv15152915;dbVar:nssv15137052;dbVar:nssv15142299;dbVar:nssv15138353;dbVar:nssv18330309;dbVar:nssv15133558;dbVar:nssv15134713;dbVar:nssv15132439;dbVar:nssv15132039;dbVar:nssv15133559;dbVar:nssv15132182;dbVar:nssv15132440;dbVar:nssv15137716;dbVar:nssv15125242;dbVar:nssv15141126;dbVar:nssv15124398;dbVar:nssv15124411\t6:60524-1768235;6:107683-4979015;6:108667-1505511;6:152635-5315912;6:152635-6027780;6:152635-6290037;6:152850-1888703;6:156975-13856156;6:156975-2030623;6:156975-2208360;6:156975-3398920;6:156975-4907926;6:156975-6417749;6:156975-7122992;6:156976-3718881;6:163084-2724845;6:163084-3459841;6:163084-5875635;6:163084-6063033;6:164634-5823834;6:164634-6284470;6:165676-9036267;6:170427-1622218;6:180960-2180143;6:195230-2117379;6:204010-11608587;6:204010-6447311\t5.63;1.98;6.89;1.86;1.64;1.57;5.54;0.70;5.13;4.69;2.97;2.03;1.54;1.38;2.70;3.76;2.92;1.68;1.63;1.70;1.57;1.08;6.63;4.81;5.01;0.84;1.54\t\t\tDDD:19553;DDD:19555;dgv140e203;nsv514340\t6:230528-373346;6:236002-373603;6:257333-380527;6:257354-382897\t0.6839\tDDD:19555;dbVar;dgv1701e212\tchr6:180946-734275;6:236002-373603;6:254255-385771\t0.1870\t\t\t\t\t\t\t\t\t6:236002-373603 DDD:19555;6:253364-302293 dgv1695e212;6:256503-293373 dgv1157e214;6:257354-293393 DDD:19561;6:257354-382897 dgv140e203;6:294125-385771 dgv1705e212;6:305182-340601 1000g;6:305182-340601 dgv1158e214;6:327587-368712 1000g;6:344136-379149 DDD:19570\t6:230528-373346 DDD:19553;6:253364-294911 dgv1694e212;6:256503-293373 1000g;6:257333-380527 nsv514340;6:257354-294837 esv2421434;6:259529-339802 TS40:ISCA-37471;6:298701-379015 esv2421645;6:305182-340601 1000g;6:327587-368712 1000g;6:327587-368712 dgv1159e214\t\t\t6:236002-373603 DDD:19555;6:254255-385771 dgv1701e212;chr6:295586-296060 dbVar;chr6:295710-295782 dbVar;chr6:314312-314882 dbVar;chr6:340942-340994 dbVar;\tchr6:180946-734275 dbVar;6:252694-302294 dgv1693e212;6:259529-339802 HI40:ISCA-37471;6:295586-296060 gnomAD-SV_v2.1_DEL_6_65910;chr6:299088-299161 dbVar;chr6:329960-330054 dbVar;chr6:340943-340994 dbVar\t0.365\t0.315\t6:266156-266836\tL1MC3\t6:362320-362381\tMIRc\t\t\t\t\t6:256601-382800\tHigh Signal Region\t6:256601-382800\tHigh Signal Region\t\t\t\t38.68\t\t\t\t-1.35330421932959\t-0.982727799381157\t\t\t\t\t\t\t\t\t\t\t\t5\t9.3421e-03\t4.3071e-03\t-1.0\t1A (cf Gene_count, RE_gene, +0.00);2F/4O (cf B_loss_source, -1.00);2B (cf po_P_loss_source, HI, OMIM_morbid, +0.00;3A (1 gene, +0.00);5F (+0.00)\t1\n6_266080_362290_DEL_1\t6\t266080\t362290\t-96211\tDEL\t\tBenign\tNA\tsplit\tp25.3\tDUSP22\t\t\t\tNM_001286555\t3\t292486\t351355\t58869\t618\t100\tno\t7\ttxStart-txEnd\t5'UTR-3'UTR\t\t\t292486\t351355\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tDDD:19553;DDD:19555;dgv140e203;nsv514340\t6:230528-373346;6:236002-373603;6:257333-380527;6:257354-382897\t0.6839\tDDD:19555;dbVar;dgv1701e212\tchr6:180946-734275;6:236002-373603;6:254255-385771\t0.1870\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t38.68\t\t\t\t-1.35330421932959\t-0.982727799381157\t\t\t\t\t56940\tHGNC:16077\t\t\t\t\t\t5\t9.3421e-03\t4.3071e-03\t\t\tfull=1\n8_7169491_7753583_DUP_1\t8\t7169491\t7753583\t584093\tDUP\t\tBenign\tNA\tfull\tp23.1\tFAM66B;DEFB109B;USP17L1;USP17L4;ZNF705G;DEFB4B;DEFB103B;SPAG11B;DEFB104B;DEFB106B;DEFB105B;DEFB107B;PRR23D1;FAM90A7;FAM90A22;FAM90A23;FAM90A14;FAM90A18;FAM90A16;FAM90A8;FAM90A17;FAM90A19;FAM90A9;FAM90A10;PRR23D2;DEFB107A;DEFB105A;DEFB106A;DEFB104A;SPAG11A;DEFB103A;DEFB4A\tFAM90A20\tZNF705B\t32\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tMCPH1 (morbid/RE=ABC_enhancer+GH_promoter_enhancer)\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tdbVar:nssv15169207;dbVar:nssv15128680;dbVar:nssv15161508;dbVar:nssv15161747;dbVar:nssv17976867;dbVar:nssv17957391;dbVar:nssv15154583;dbVar:nssv15161801;nssv15777239;nssv17976962;dbVar:nssv15154584;dbVar:nssv16206921;dbVar:nssv15154580;dbVar:nssv15161417;nssv15161657;dbVar:nssv15147671;dbVar:nssv15161846;dbVar:nssv15150473;dbVar:nssv15127651;dbVar:nssv15149098;dbVar:nssv15169210;dbVar:nssv15154582;dbVar:nssv15146537;dbVar:nssv15161807;dbVar:nssv15161553;dbVar:nssv15161105;dbVar:nssv15161095;dbVar:nssv15161561;dbVar:nssv15161078;dbVar:nssv15147455;dbVar:nssv16736635;dbVar:nssv15161269;dbVar:nssv15161748;dbVar:nssv15161749;dbVar:nssv15143576;dbVar:nssv15161775;dbVar:nssv15146180;dbVar:nssv15161087;dbVar:nssv15161068;dbVar:nssv15161792;dbVar:nssv15606063;dbVar:nssv15151542;dbVar:nssv15161084;dbVar:nssv16206931;dbVar:nssv15154577;dbVar:nssv15161089;dbVar:nssv15151538;dbVar:nssv15152254;dbVar:nssv18842054;dbVar:nssv15161540;dbVar:nssv15161727;dbVar:nssv15161764\t8:10214-146293414;8:13939-146304022;8:46311-11879315;8:46311-30472220;8:158049-10348413;8:158049-11936107;8:158049-13974319;8:158049-146295771;8:158049-15423270;8:158049-8102819;8:158049-9750676;8:158050-146295771;8:158992-13304906;8:158992-146280828;8:158992-17536147;8:163683-46938942;8:164985-11860845;8:164985-146293414;8:168484-13147575;8:169854-10022996;8:176453-12556063;8:176453-12570496;8:176453-146294098;8:176453-16137655;8:176453-34349408;8:176453-37879246;8:176453-7838959;8:176815-43396776;8:191531-146274835;8:191531-146280020;8:191531-17536206;8:191531-22404983;8:191531-23055911;8:191531-7752586;8:191606-146280167;8:191606-24514484;8:191606-30948590;8:194618-13947374;8:1825201-24533193;8:6961184-12157391;8:6999220-11895232;8:6999220-11898980;8:6999220-38553064;8:6999220-8881836;8:7053187-11805960;8:7080282-12045269;8:7169491-12404062;8:7268820-12039974;8:7691902-12039974\t0.40;0.40;4.94;1.92;5.73;4.96;4.23;0.40;3.83;7.35;6.09;0.40;4.44;0.40;3.36;1.25;4.99;0.40;4.50;5.93;4.72;4.71;0.40;3.66;1.71;1.55;7.62;1.35;0.40;0.40;3.37;2.63;2.55;7.71;0.40;2.40;1.90;4.25;2.57;11.24;11.93;11.92;1.85;31.03;12.29;11.76;11.16;10.16;1.42\t\t\tdbVar:nssv15168702;dbVar:nssv15169206;dbVar:nssv18842057;dbVar:nssv17956019;dbVar:nssv15154581;dbVar:nssv18326425;dbVar:nssv15149861;dbVar:nssv15775686;dbVar:nssv17976739;dbVar:nssv16208166;dbVar:nssv15774257;dbVar:nssv15149509;dbVar:nssv18330306;dbVar:nssv18329623;dbVar:nssv16216869;dbVar:nssv15169209;dbVar:nssv15223191;dbVar:nssv15147275;dbVar:nssv15148964;dbVar:nssv15147296;dbVar:nssv15146181;nssv15146816;dbVar:nssv15606064;dbVar:nssv15146660;dbVar:nssv18841910;dbVar:nssv15161264;nssv15161582;dbVar:nssv15145917;dbVar:nssv15161283;dbVar:nssv15161284;dbVar:nssv15161070;dbVar:nssv15141976;dbVar:nssv15161050\t8:10214-10197718;8:10214-8948469;8:10502-11142629;8:10502-7214947;8:158049-10939681;8:158049-11281408;8:158049-13309069;8:158049-14214722;8:158049-30187456;8:158049-9025197;8:158049-9393052;8:158049-9749574;8:158050-10965627;8:158050-18936715;8:161517-11516619;8:164985-10007227;8:176815-7753583;8:191531-10049105;8:191531-10315994;8:191531-10724642;8:191531-7752586;8:194618-7787444;8:360370-7334625;8:399894-23712417;8:2292236-27361796;8:3791728-11384448;8:7053187-12241152;8:7092360-12372324;8:7169491-12404062;8:7268820-11805960;8:7268820-11819316\t5.73;6.53;5.25;0.63;5.42;5.25;4.44;4.16;1.95;6.59;6.32;6.09;5.40;3.11;5.14;5.93;7.71;5.93;5.77;5.55;7.71;7.69;2.37;2.51;2.33;7.69;11.26;11.06;11.16;10.68;10.65\t\t\tDDD:26674;TS40:ISCA-37472;esv2761169;esv2764098\t8:6858816-8072303;8:6959834-8600711;8:7024892-8031414;8:7053187-8130689\t0.2355\tDDD:26674;HI40:ISCA-37472;esv2761169;esv2764098\t8:6858816-8072303;8:6959834-8600711;8:7024892-8031414;8:7053187-8130689\t0.2237\t\t\t\t\t\t\t\t\t8:6959834-8600711 esv2764098;8:7024892-8031414 DDD:26674;8:7053187-8130689 TS40:ISCA-37472;8:7170611-7177489 nsv515099;8:7201176-7392220 DDD:26689;8:7212583-7227421 1000g;8:7212583-7227421 TS40:ISCA-46631;8:7241528-7403182 nsv515100;8:7308244-7308706 DDD:26704;8:7632945-7856630 DDD:26727;8:7717878-7717938 DDD:26737;8:7734213-7856702 DDD:26743;8:7737000-7743100 gnomAD-SV_v2.1_DUP_8_23708;8:6959834-8600711 esv2764098;8:7024892-8031414 DDD:26674;8:7053187-8130689 TS40:ISCA-37472;8:7170611-7177489 nsv515099;8:7201176-7392220 DDD:26689;8:7212583-7227421 1000g;8:7212583-7227421 TS40:ISCA-46631...\t8:6858816-8072303 esv2761169;8:6985776-7230992 DDD:26670;8:7035907-7428513 DDD:26675;8:7154889-7213289 DDD:26682;8:7190891-7190961 DDD:26685;8:7212583-7227421 1000g;8:7212583-7227421 1000g;8:7212583-7227421 dgv1365e214;8:7250369-7832042 dgv6936n100;8:7401394-7472190 DDD:26720;8:7634705-7829839 DDD:26729;8:7718891-7784263 DDD:26742;8:7737000-7743100 TS40:ISCA-46381;8:6858816-8072303 esv2761169;8:6985776-7230992 DDD:26670;8:7035907-7428513 DDD:26675;8:7154889-7213289 DDD:26682;8:7190891-7190961 DDD:26685;8:7212583-7227421 1000g;8:7212583-7227421 1000g...\t\t\t8:6959834-8600711 esv2764098;8:7024892-8031414 DDD:26674;8:7053187-8130689 HI40:ISCA-37472;8:7154889-7213289 DDD:26682;8:7158202-7189800 DDD:26683;chr8:7179582-7191032 dbVar;8:7179583-7191032 esv3616115;8:7190891-7190961 DDD:26685;chr8:7201000-7206400 dbVar;chr8:7204184-7204308 dbVar;8:7212583-7227421 1000g;chr8:7221359-7221602 dbVar;8:7228000-7235000 gnomAD-SV_v2.1_DEL_8_89335;chr8:7286205-7286328 dbVar;chr8:7326402-7326559 dbVar;8:7355000-7363000 gnomAD-SV_v2.1_DEL_8_89340;8:7355294-7364762 1000g;8:7401394-7472190 DDD:26720;8:7402900-7419700 gnomAD-SV_v2.1_DEL_8_89341;8:7405950-7443050 gnomAD-SV_v2.1_DEL_8_89342...\t8:6858816-8072303 esv2761169;8:6985776-7230992 DDD:26670;8:7035907-7428513 DDD:26675;chr8:7085462-7537934 dbVar;8:7158046-7189992 esv2675221;chr8:7175745-7175870 dbVar;8:7179583-7191032 1000g;chr8:7180382-7180743 dbVar;8:7190892-7196288 DDD:26687;8:7201000-7206400 gnomAD-SV_v2.1_DEL_8_89332;chr8:7212582-7227421 dbVar;8:7212583-7227421 esv3616116;chr8:7228000-7235000 dbVar;chr8:7276552-7277128 dbVar;8:7308244-7308706 DDD:26704;chr8:7355000-7363000 dbVar;chr8:7355293-7364762 dbVar;8:7355294-7364762 esv3616120;chr8:7402900-7419700 dbVar;chr8:7405950-7443050 dbVar...\t0.260\t0.330\t\t\t\t\t\t\t8:7150797-7184572;8:7150797-7195814;8:7150797-7200543;8:7150798-7238459\t8:7600001-7825413\t8:7012601-8066200\tHigh Signal Region\t8:7012601-8066200\tHigh Signal Region\t\t\t\t99.72\t\t\t\t2.14121257165536\t2.19863945242443\t\t\t\t\t\t\t\t\t\t\t\t8\t4.2180e-01\t5.1947e-01\t-1.0\t1A (cf Gene_count, RE_gene, +0.00);2D (cf B_gain_source, -1.00);2B (cf po_P_gain_source, TS, OMIM_morbid, +0.00);2E (cf B_gain_source, +0.00);2L (DEFB4A/FAM66B, +0.00);3A (32 genes, +0.00);4O (cf po_B_gain_AllG_source, B_gain_source, po_B_gain_SomeG_source, +0.00);5F 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752198\t7754238\t1385\t58\t29\tyes\t2\ttxStart-intron1\t5'UTR-CDS\t412\t3'\t7752198\t7753583\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tDDD:26674;DDD:26727;DDD:26729;DDD:26742;DDD:26743;TS40:ISCA-37472;dgv6936n100;esv2761169;esv2764098\t8:6858816-8072303;8:6959834-8600711;8:7024892-8031414;8:7053187-8130689;8:7250369-7832042;8:7632945-7856630;8:7634705-7829839;8:7718891-7784263;8:7734213-7856702\t0.2355\tDDD:26674;DDD:26727;HI40:ISCA-37472;HI40:ISCA-46380;HI40:ISCA-46382;dbVar;esv2761169;esv2764098;gnomAD-SV_v2.1_DEL_8_89353;gnomAD-SV_v2.1_DEL_8_89355\t8:6858816-8072303;8:6959834-8600711;8:7024892-8031414;8:7053187-8130689;8:7632945-7856630;8:7736500-7764500;chr8:7736500-7764500;8:7736500-7764500;8:7745000-7754100;chr8:7745000-7754100;8:7745000-7754100\t0.5182\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t97.87\t\t\t\t1.12959151611996\t0.758429673080804\t\t\t\t\t1673\tHGNC:2767\t\t\t\t\t\t9\t1.1637e-03\t3.9981e-01\t\t\tfull=1\n8_141035364_141061798_DEL_1\t8\t141035364\t141061798\t-26435\tDEL\tDI AR\tPathogenic\tNA\tfull\tq24.3\tTRAPPC9\tC8orf17\tPEG13\t1\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tKCNK9 (morbid/RE=ABC_enhancer+GH_enhancer)\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tdbVar:nssv15169207;dbVar:nssv15128680;dbVar:nssv15161801;nssv15777239;nssv17976962;dbVar:nssv15161417;nssv15161657;dbVar:nssv15161846;dbVar:nssv15169210;dbVar:nssv15161105;dbVar:nssv15161269;dbVar:nssv15161748;dbVar:nssv15161087;dbVar:nssv15161426;dbVar:nssv15161357;dbVar:nssv15777249;dbVar:nssv18326351;dbVar:nssv17970300;dbVar:nssv15161337;dbVar:nssv15161103;dbVar:nssv17977109;dbVar:nssv15161374;dbVar:nssv15161674;dbVar:nssv15161669;dbVar:nssv15161791;dbVar:nssv15161680;dbVar:nssv15161065;dbVar:nssv17976072;dbVar:nssv15161091;dbVar:nssv15161853;dbVar:nssv15161352;dbVar:nssv15161104;dbVar:nssv15161722;dbVar:nssv15161428;dbVar:nssv16208199;dbVar:nssv15162410;dbVar:nssv15773510;dbVar:nssv15774288;dbVar:nssv15161330;dbVar:nssv15161750;dbVar:nssv16206976;dbVar:nssv15161266;dbVar:nssv17970325;dbVar:nssv15131822;dbVar:nssv18841906;dbVar:nssv15161331;dbVar:nssv15143620;dbVar:nssv15161849;dbVar:nssv15775349;dbVar:nssv15161867;dbVar:nssv15775091;dbVar:nssv15161075;dbVar:nssv15161551\t8:10214-146293414;8:13939-146304022;8:158049-146295771;8:158050-146295771;8:158992-146280828;8:164985-146293414;8:176453-146294098;8:191531-146274835;8:191531-146280020;8:191606-146280167;8:12491000-146295771;8:21149034-146295771;8:31936552-146295771;8:68912433-146295771;8:70382991-146295771;8:78392287-146294098;8:79526313-146280020;8:84712254-146295771;8:86778229-146295771;8:86841155-146295771;8:86841229-142689874;8:88943381-146294098;8:93047483-141355635;8:95694383-146294042;8:96496504-146295711;8:98395102-146295771;8:98432251-146222672;8:101879572-146295771;8:104318565-146294098;8:114592632-146280020;8:114853127-146295771;8:121042468-146295771;8:121694650-146295771;8:122193547-146295771;8:125496224-146295771;8:125510740-146294098;8:125526332-146280020;8:128877996-146295771;8:129233159-146274835;8:130863094-146295771;8:131127765-142238309;8:131138344-143473913;8:131651429-146294098;8:131682564-146280020;8:134825278-146280828;8:136059860-146295771;8:136378790-146295771;8:139188798-146295771;8:140016462-146274835;8:140249068-146294098\t0.02;0.02;0.02;0.02;0.02;0.02;0.02;0.02;0.02;0.02;0.02;0.02;0.02;0.03;0.03;0.04;0.04;0.04;0.04;0.04;0.05;0.05;0.05;0.05;0.05;0.06;0.06;0.06;0.06;0.08;0.08;0.10;0.11;0.11;0.13;0.13;0.13;0.15;0.16;0.17;0.24;0.21;0.18;0.18;0.23;0.26;0.27;0.37;0.42;0.44\tIntellectual developmental disorder, AR 13, 613192 (3) AR\t\tdbVar:nssv16208202;dbVar:nssv15127815;morbid:TRAPPC9\t8:126892815-143750028;8:127638607-144388560;8:140739968-141468678\t0.16;0.16;3.63\t\t\t\t\t\tdbVar\tchr8:140980774-141135131\t0.01\t\t\t\t\t\t\t\t\t\t\t\t\tchr8:141040435-141042904 dbVar\tchr8:140980774-141135131 dbVar\t0.535\t0.380\t8:141035378-141035461;8:141035462-141035486\tMER58C;(CAAAA)n\t\t\t\t\t\t\t\t\t\t\t\t\t\t53.39\t0.107633755409335\t-1.97676981971355\t-1.34878674017516\t-0.190632175596259\t1.58912949219012\t\t\t\t\t\t\t611966\t\t\tyes\t\t3\t2.2898e-14\t5.7604e-06\t-1.0\t1A (cf Gene_count, RE_gene, +0.00);2F/4O (cf B_loss_source, -1.00);2B (cf po_P_loss_source, HI, OMIM_morbid, +0.00;3A (1 gene, +0.00);5F (+0.00)\t1\n8_141035364_141061798_DEL_1\t8\t141035364\t141061798\t-26435\tDEL\tDI AR\tPathogenic\tNA\tsplit\tq24.3\tTRAPPC9\t\t\t\tNM_001160372\t4\t140739967\t141467843\t26435\t0\t0\tNA\t23\tintron17-intron17\tCDS\t1187\t3'\t141035363\t141061798\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tdbVar\tchr8:140980774-141135131\t0.01\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t30\t0\t53.39\t0.107633755409335\t-1.97676981971355\t-1.34878674017516\t-0.190632175596259\t1.58912949219012\tautosomal recessive non-syndromic intellectual disability;intellectual disability, autosomal recessive 13;intellectual disability-obesity-brain malformations-facial dysmorphism syndrome\tAR\tDefinitive;Moderate;Strong;Supportive\t2000476;20004763;20004764;20004765;20004765[PMID]_20004763[PMID]_20004765[PMID];22549410;22549410[PMID]\t83696\tHGNC:30832\t611966\tIntellectual developmental disorder, AR 13, 613192 (3) AR\tAR\tyes\t\t3\t2.2898e-14\t5.7604e-06\t\t\tfull=1\n14_107152093_107180095_DEL_1\t14\t107152093\t107180095\t-28003\tDEL\t\tBenign\tNA\tfull\tq32.33\t\tLINC00221\tMIR5195\t0\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tdbVar:nssv15162475;dbVar:nssv15161908;dbVar:nssv15162476;dbVar:nssv15161629;dbVar:nssv15161107;nssv15161424;dbVar:nssv15161067;dbVar:nssv15161689;dbVar:nssv15161760;dbVar:nssv15161081;dbVar:nssv18330720;dbVar:nssv15161039;dbVar:nssv15161040;dbVar:nssv15777241;dbVar:nssv15125898;dbVar:nssv15161535;dbVar:nssv15777234;dbVar:nssv15161537;dbVar:nssv15606082;dbVar:nssv15161360;dbVar:nssv15135151\t14:19000423-107289053;14:19280734-107287663;14:19327824-107287663;14:19794562-107234280;14:20511674-107285437;14:20619309-107263478;14:73750742-107285437;14:74122476-107287505;14:77689139-107287505;14:84537503-107285437;14:86560375-107240869;14:91922206-107240869;14:91969029-107285437;14:93331785-107289540;14:98104858-107263478;14:99794231-107285437;14:99914350-107258824;14:100575918-107281934;14:103788752-107263478;14:106252706-107263478\t0.03;0.03;0.03;0.03;0.03;0.03;0.08;0.08;0.09;0.12;0.14;0.18;0.18;0.20;0.31;0.37;0.38;0.42;0.81;2.77\t\t\tdbVar:nssv15161324;dbVar:nssv16215328;dbVar:nssv15161030;dbVar:nssv15161062;dbVar:nssv15142554;dbVar:nssv15161267;dbVar:nssv15161579;dbVar:nssv15161268;dbVar:nssv17968992;dbVar:nssv15161102;dbVar:nssv15161557;dbVar:nssv16255573;dbVar:nssv15142555;dbVar:nssv15161354;dbVar:nssv18841864;dbVar:nssv15777252;dbVar:nssv15161369;dbVar:nssv15141232;nssv16208943;dbVar:nssv18830964;dbVar:nssv15150359;dbVar:nssv15161271;dbVar:nssv15161574;dbVar:nssv15161803;dbVar:nssv16208399;dbVar:nssv15142293;dbVar:nssv16208400;dbVar:nssv15120383;dbVar:nssv15137946\t14:95990745-107287708;14:96829291-107287663;14:98404975-107263478;14:100297993-107263478;14:100661320-107285437;14:100775720-107263478;14:101048397-107285437;14:101274638-107263478;14:101732159-107285437;14:102131940-107263478;14:102392008-107284531;14:102615954-107285437;14:102670707-107285437;14:102705760-107285437;14:102729778-107283138;14:102931120-107285437;14:103071434-107287505;14:103153638-107285437;14:103636648-107285437;14:103965060-107285437;14:104251096-107278770;14:104289938-107287505;14:104517596-107285437;14:104764079-107285437;14:104915609-107285437;14:105303585-107285437;14:105489734-107258965;14:106252706-107287505\t0.25;0.27;0.32;0.40;0.42;0.43;0.45;0.47;0.50;0.55;0.57;0.60;0.61;0.61;0.61;0.64;0.66;0.68;0.77;0.84;0.92;0.93;1.01;1.11;1.18;1.41;1.58;2.71\t\t\tDDD:43963;TS40:ISCA-37477;esv2760346\t14:106050001-107289540;14:106437088-107285437;14:107136632-107191499\t0.0828\tDDD:43904;DDD:43963;HI40:ISCA-37477;esv2760346\t14:106050001-107289540;14:106437088-107285437;14:106700994-107266403;14:107136632-107191499\t0.2438\t\t\t\t\t\t\t\t\t14:106437088-107285437 esv2760346;14:107136632-107191499 DDD:43963;14:107147167-107164532 TS40:ISCA-46684;\t14:106050001-107289540 TS40:ISCA-37477;14:106874357-107164992 IMH;14:107145552-107179808 dgv699e212;14:107147167-107164532 dgv428e214\t\t\t14:106437088-107285437 esv2760346;14:107054315-107166266 DDD:43951;chr14:107138985-107155491 dbVar;14:107172849-107183396 HI40:ISCA-46673;14:107174372-107174933 IMH;14:107174399-107174927 DDD:43974;\t14:106050001-107289540 HI40:ISCA-37477;14:106700994-107266403 DDD:43904;14:107136632-107191499 DDD:43963;chr14:107171543-107171645 dbVar;14:107172849-107183396 esv3635707;14:107174391-107174931 esv3635708;14:107174399-107174927 esv2665347\t0.355\t0.425\t\t\t\t\t\t\t\t\t14:107151001-107176900\tHigh Signal Region\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t-1.6\t1B (cf Gene_count, RE_gene, -0.60);2F/4O (cf B_loss_source, -1.00);2B (cf po_P_loss_source, HI, OMIM_morbid, +0.00;3A (0 gene, +0.00);5F (+0.00)\t1\n6_78979173_79023328_DEL_1\t6\t78979173\t79023328\t-44156\tDEL\t\tBenign\tNA\tfull\tq14.1\t\tMEI4\tMIR10524\t0\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tdbVar:nssv15166690;dbVar:nssv15166692;dbVar:nssv15161859;nssv15161868;dbVar:nssv15168255;dbVar:nssv15606075;dbVar:nssv17970109;dbVar:nssv15148895\t6:60108-171054786;6:108667-170980171;6:156976-170919482;6:165633-170919470;6:29455466-81447367;6:69938253-94379210;6:75092524-142361637\t0.03;0.03;0.03;0.03;0.08;0.18;0.07\t\t\tdbVar:nssv17976865;dbVar:nssv15138420;dbVar:nssv17957115;dbVar:nssv17956905;dbVar:nssv15154430;dbVar:nssv16255333;dbVar:nssv15139907;dbVar:nssv16215036\t6:64954688-79581678;6:65259549-84136510;6:70165297-79920769;6:72799055-83275894;6:73674613-84829774;6:74226560-80208037;6:76635917-93420511;6:78562076-79746800\t0.30;0.23;0.45;0.42;0.40;0.74;0.26;3.73\t\t\tDDD:21366;dgv768n27;nsv516597\t6:78848098-79052702;6:78950789-79066065;6:78973202-79031742\t0.3704\t1000g;DDD:21366;DDD:21369;DDD:21373;IMH;dbVar;dgv10802n54;dgv1137e199;dgv1810e212;dgv1811e212;dgv6030n100;dgv6037n100;dgv766n27;dgv767n27;dgv769n27;esv2422170;esv2760997;esv2763987;esv3609657;esv3609663;esv3890888;gnomAD-SV_v2.1_DEL_6_70839;nsv514376;nsv516597\t6:78836835-79051952;6:78848098-79052702;chr6:78892808-79053430;6:78892809-79053430;6:78892809-79053430;6:78950789-79066065;6:78961945-79041809;6:78962294-79041760;6:78962541-79031742;6:78962541-79052702;6:78962582-79027502;6:78962582-79041797;chr6:78962843-79034588;6:78965526-79033478;chr6:78967097-79036275;6:78967098-79036275;6:78967098-79036275;6:78967173-79036477;chr6:78967187-79036419;6:78967187-79036419;6:78967195-79036475;6:78967195-79036497;6:78969054-79027758;6:78969066-79031970;6:78969066-79035185;6:78972098-79031153;6:78972931-79033478;6:78973202-79031742\t0.4631\t\t\t\tIMH\t6:49889718-107723757\t0.1414\t\t\t6:78950789-79066065 DDD:21366;6:78973202-79031742 dgv768n27;\t6:78848098-79052702 nsv516597;6:78963972-78992918 DDD:21367;6:78999918-79033124 DDD:21375\t\t\t6:78848098-79052702 nsv516597;6:78892809-79053430 1000g;6:78950789-79066065 DDD:21366;6:78962294-79041760 dgv1810e212;6:78962541-79052702 dgv767n27;6:78962582-79041797 dgv6030n100;6:78965526-79033478 esv3890888;6:78967098-79036275 1000g;6:78967173-79036477 IMH;6:78967187-79036419 gnomAD-SV_v2.1_DEL_6_70839;6:78967195-79036497 dgv1137e199;6:78969066-79031970 DDD:21373;6:78972098-79031153 nsv514376;6:78973202-79031742 dgv769n27\t6:78836835-79051952 esv2760997;chr6:78892808-79053430 dbVar;6:78892809-79053430 esv3609657;6:78961945-79041809 esv2763987;6:78962541-79031742 dgv766n27;6:78962582-79027502 dgv1811e212;chr6:78962843-79034588 dbVar;chr6:78967097-79036275 dbVar;6:78967098-79036275 esv3609663;chr6:78967187-79036419 dbVar;6:78967195-79036475 DDD:21369;6:78969054-79027758 dgv6037n100;6:78969066-79035185 esv2422170;6:78972931-79033478 dgv10802n54\t0.325\t0.270\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t-1.6\t1B (cf Gene_count, RE_gene, -0.60);2F/4O (cf B_loss_source, -1.00);2B (cf po_P_loss_source, HI, OMIM_morbid, +0.00;3A (0 gene, +0.00);5F (+0.00)\t1\n"
  },
  {
    "path": "share/doc/AnnotSV/Example/test1.annotated.variantconvert.log",
    "content": "python3 /PROGS/EXTERN/AnnotSV/AnnotSV_dev/share/python3/variantconvert//src/variantconvert convert -i /PROGS/EXTERN/AnnotSV/AnnotSV_dev/share/doc/AnnotSV/Example/test1.annotated.tsv -o /PROGS/EXTERN/AnnotSV/AnnotSV_dev/share/doc/AnnotSV/Example/test1.annotated.vcf -c /PROGS/EXTERN/AnnotSV/AnnotSV_dev/share/python3/variantconvert//src/variantconvert/configs/GRCh37/annotsv3_from_bed.combined.local.json\n\n2026-04-14 12:03:34 [INFO] running variantconvert 2.0.1\n/PROGS/EXTERN/AnnotSV/AnnotSV_dev/share/python3/variantconvert/src/variantconvert/converters/vcf_from_annotsv.py:59: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '[1.0 '.' 2.0 '.' '.' 1.0 '.' 9.0 '.' '.' '.' '.' '.' '.' '.' '.' '.' 2.0\n '.' '.' 1.0 '.' 1.0 '.' 1.0 '.' 2.0 '.' '.' 0.0 26.0 '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' 17.0 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' 0.0 1.0 '.' 18.0 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' 7.0 '.' '.' '.' '.' '.' '.' '.' 3.0 '.' '.'\n '.' 1.0 '.' 14.0 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n 7.0 '.' '.' '.' '.' '.' '.' '.' 2.0 '.' '.' 4.0 '.' '.' '.' '.' 78.0 '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' 23.0 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' 1.0 '.' 3.0 '.' '.' '.' 155.0\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' 1.0 '.' 1.0 '.' 12.0 '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' 1.0 '.' 2.0 '.' '.' 0.0 1.0 '.'\n 1.0 '.' 30.0 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' 32.0 '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' 32.0 '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' 6.0 '.' '.' '.' '.' '.' '.' 1.0 '.'\n 9.0 '.' '.' '.' '.' '.' '.' '.' '.' '.']' has dtype incompatible with float64, please explicitly cast to a compatible dtype first.\n  df.loc[:, df.columns != sample_col] = df.loc[:, df.columns != sample_col].fillna(\".\")\n/PROGS/EXTERN/AnnotSV/AnnotSV_dev/share/python3/variantconvert/src/variantconvert/converters/vcf_from_annotsv.py:59: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '['.' 1.0 '.' 6.0 3.0 '.' 2.0 '.' 1.0 2.0 2.0 2.0 3.0 1.0 1.0 1.0 1.0 '.'\n 5.0 2.0 '.' 5.0 '.' 5.0 '.' 1.0 '.' 1.0 2.0 '.' '.' 1.0 1.0 2.0 2.0 1.0\n 2.0 1.0 1.0 1.0 1.0 2.0 1.0 2.0 2.0 1.0 1.0 2.0 4.0 1.0 1.0 1.0 1.0 1.0\n 1.0 1.0 3.0 '.' 1.0 2.0 2.0 1.0 2.0 1.0 1.0 1.0 1.0 2.0 1.0 2.0 2.0 1.0\n 1.0 2.0 4.0 '.' '.' 4.0 '.' 1.0 1.0 3.0 1.0 1.0 5.0 3.0 3.0 1.0 4.0 1.0\n 1.0 1.0 1.0 1.0 1.0 1.0 2.0 '.' 1.0 5.0 3.0 3.0 1.0 4.0 1.0 '.' 1.0 1.0\n 1.0 '.' 2.0 '.' 4.0 3.0 3.0 1.0 1.0 1.0 1.0 4.0 1.0 3.0 2.0 2.0 1.0 3.0\n '.' 7.0 4.0 2.0 2.0 6.0 4.0 5.0 '.' 1.0 1.0 '.' 1.0 1.0 1.0 1.0 '.' 6.0\n 6.0 1.0 2.0 1.0 3.0 1.0 3.0 5.0 2.0 1.0 2.0 4.0 4.0 4.0 5.0 1.0 7.0 2.0\n 1.0 1.0 6.0 1.0 5.0 1.0 3.0 6.0 5.0 4.0 1.0 3.0 2.0 1.0 7.0 1.0 1.0 2.0\n 1.0 2.0 1.0 2.0 2.0 2.0 1.0 6.0 1.0 4.0 1.0 1.0 1.0 1.0 1.0 2.0 1.0 2.0\n 1.0 2.0 7.0 4.0 3.0 1.0 1.0 4.0 4.0 4.0 4.0 1.0 3.0 4.0 3.0 1.0 1.0 1.0\n 3.0 1.0 1.0 2.0 1.0 '.' 1.0 2.0 1.0 2.0 1.0 2.0 4.0 1.0 1.0 2.0 1.0 2.0\n 1.0 1.0 1.0 1.0 1.0 1.0 1.0 2.0 1.0 1.0 1.0 '.' 5.0 '.' 1.0 1.0 2.0 '.'\n 2.0 6.0 1.0 3.0 4.0 1.0 2.0 4.0 3.0 2.0 1.0 4.0 1.0 4.0 1.0 2.0 3.0 1.0\n 4.0 4.0 4.0 4.0 4.0 5.0 3.0 4.0 1.0 1.0 2.0 1.0 1.0 1.0 1.0 3.0 2.0 1.0\n 3.0 4.0 2.0 3.0 2.0 3.0 3.0 1.0 5.0 1.0 3.0 4.0 4.0 2.0 3.0 1.0 3.0 4.0\n 5.0 2.0 4.0 2.0 2.0 1.0 2.0 2.0 3.0 2.0 8.0 2.0 1.0 2.0 2.0 4.0 1.0 1.0\n 4.0 1.0 3.0 2.0 3.0 2.0 1.0 4.0 1.0 1.0 1.0 1.0 1.0 3.0 1.0 3.0 3.0 1.0\n 5.0 3.0 3.0 1.0 3.0 2.0 1.0 1.0 1.0 4.0 3.0 2.0 1.0 3.0 1.0 3.0 3.0 3.0\n 2.0 2.0 1.0 3.0 3.0 4.0 1.0 3.0 1.0 2.0 1.0 1.0 2.0 1.0 2.0 1.0 5.0 5.0\n 1.0 3.0 3.0 5.0 3.0 1.0 3.0 3.0 1.0 1.0 1.0 1.0 2.0 1.0 1.0 1.0 1.0 1.0\n 1.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0 '.' 4.0 '.' 2.0 '.' 1.0 1.0\n 1.0 2.0 1.0 2.0 1.0 2.0 4.0 1.0 4.0 1.0 '.' 3.0 '.' 4.0 3.0 '.' '.' 1.0\n '.' 2.0 '.' 3.0 5.0 3.0 1.0 2.0 4.0 3.0 2.0 3.0 3.0 4.0 1.0 1.0 4.0 4.0\n 5.0 3.0 4.0 2.0 1.0 4.0 2.0 1.0 4.0 3.0 5.0 2.0 1.0 4.0 1.0 '.' 2.0 2.0\n 1.0 1.0 3.0 2.0 4.0 4.0 1.0 2.0 3.0 2.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0\n 1.0 1.0 1.0 1.0 1.0 1.0 3.0 4.0 3.0 1.0 4.0 4.0 '.' 2.0 2.0 1.0 1.0 3.0\n 2.0 4.0 4.0 1.0 2.0 3.0 2.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0\n 1.0 1.0 1.0 3.0 4.0 3.0 1.0 4.0 4.0 '.' 3.0 1.0 1.0 1.0 2.0 3.0 '.' 4.0\n '.' 2.0 3.0 4.0 1.0 5.0 3.0 7.0 1.0 1.0]' has dtype incompatible with float64, please explicitly cast to a compatible dtype first.\n  df.loc[:, df.columns != sample_col] = df.loc[:, df.columns != sample_col].fillna(\".\")\n/PROGS/EXTERN/AnnotSV/AnnotSV_dev/share/python3/variantconvert/src/variantconvert/converters/vcf_from_annotsv.py:59: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '['.' 149194105.0 '.' 196743969.0 196788860.0 '.' 248753787.0 '.'\n 46992020.0 47083456.0 47096453.0 47133334.0 47157988.0 47177206.0\n 47192907.0 47379719.0 47590260.0 '.' 66278105.0 66288095.0 '.' 63952692.0\n '.' 63952692.0 '.' 22847807.0 '.' 73945188.0 74003846.0 '.' '.'\n 20487996.0 20613648.0 20737093.0 20767673.0 20874796.0 21038123.0\n 21040700.0 21145580.0 21145766.0 21208605.0 21932513.0 22014402.0\n 22051852.0 22133180.0 22195582.0 22278030.0 22368477.0 22382472.0\n 22413461.0 22448239.0 22465805.0 22513228.0 22546564.0 22675147.0\n 22702284.0 22736245.0 '.' 20613648.0 20737093.0 20767673.0 20874796.0\n 21038123.0 21040700.0 21145580.0 21145766.0 21208605.0 21932513.0\n 22014402.0 22051852.0 22133180.0 22195582.0 22278030.0 22368477.0\n 22382472.0 '.' '.' 1560427.0 '.' 32163432.0 32181363.0 32264606.0\n 32300867.0 32611681.0 32684850.0 32888793.0 33205546.0 33215160.0\n 33262081.0 33298270.0 33571843.0 33966044.0 34264719.0 34403801.0\n 34430129.0 34442319.0 34597786.0 '.' 32611681.0 32684850.0 32888793.0\n 33205546.0 33215160.0 33262081.0 33298270.0 '.' 33571843.0 33966044.0\n 34264719.0 '.' 34597786.0 '.' 13972820.0 14138989.0 14204397.0 14207056.0\n 14934291.0 14954671.0 15008301.0 15133095.0 15154943.0 15207128.0\n 15339331.0 15339331.0 15373624.0 15405577.0 '.' 34493062.0 34522267.0\n 34538464.0 34581084.0 34623841.0 34746118.0 34797171.0 '.' 44107281.0\n 44270938.0 '.' 242823513.0 242912833.0 242943359.0 242989834.0 '.'\n 18893832.0 18900293.0 18926981.0 18957980.0 19017036.0 19023798.0\n 19033674.0 19117791.0 19118820.0 19134505.0 19159218.0 19163093.0\n 19166985.0 19318220.0 19420067.0 19428408.0 19434956.0 19437433.0\n 19467348.0 19510546.0 19553652.0 19702025.0 19704742.0 19711061.0\n 19748300.0 19770745.0 19833668.0 19863044.0 19929294.0 19951275.0\n 19957418.0 20008632.0 20020661.0 20067763.0 20073268.0 20073580.0\n 20099397.0 20102208.0 20103626.0 20113924.0 20119326.0 20135938.0\n 20186251.0 20193854.0 20228937.0 20236656.0 20301760.0 20326419.0\n 20351090.0 20366210.0 20377668.0 20383730.0 20455681.0 20483850.0\n 20632119.0 20689194.0 20748440.0 20778873.0 20795805.0 20861896.0\n 21043842.0 21055401.0 21061978.0 21128400.0 21213294.0 21271694.0\n 21311379.0 21319459.0 21336585.0 21353392.0 21356210.0 21362491.0\n 21369453.0 21383006.0 21388464.0 21396680.0 21400234.0 21457304.0 '.'\n 63088363.0 63263983.0 63409271.0 63638350.0 63727499.0 63804974.0\n 63819545.0 63846320.0 63884074.0 63897187.0 63989697.0 63996226.0\n 63997639.0 64053639.0 64064036.0 64077911.0 64089145.0 64173219.0\n 64430932.0 64501329.0 64547021.0 64670545.0 65160613.0 '.' 97483364.0 '.'\n 195415368.0 195426271.0 195447848.0 '.' 53214.0 124382.0 206388.0\n 264463.0 331602.0 343945.0 419223.0 433776.0 492998.0 567668.0 570956.0\n 619361.0 646693.0 666224.0 668330.0 675617.0 699620.0 754230.0 778744.0\n 843064.0 926247.0 952674.0 981444.0 980831.0 1005413.0 1065265.0\n 1107426.0 1108984.0 1160719.0 1189570.0 1203907.0 1205232.0 1243227.0\n 1283678.0 1340995.0 1396719.0 1641613.0 1694457.0 1717678.0 1723247.0\n 1795019.0 1813205.0 1873119.0 1976362.0 1984449.0 1988110.0 2043721.0\n 2061053.0 2073644.0 2230075.0 2249158.0 2251803.0 2271323.0 2420681.0\n 2470832.0 2538373.0 2743374.0 2819896.0 2845570.0 2932293.0 2937272.0\n 2939662.0 2965297.0 3047865.0 3076407.0 3250885.0 3287617.0 3443694.0\n 3465032.0 3505338.0 3578595.0 3675319.0 3768111.0 3943486.0 4190452.0\n 4237268.0 4269427.0 4291977.0 4388828.0 4420694.0 4477847.0 4543857.0\n 4666052.0 4763486.0 4846163.0 4861391.0 4922534.0 5016312.0 5053206.0\n 5526295.0 5564165.0 5712927.0 5822490.0 5925001.0 5961101.0 6027925.0\n 6066703.0 6202459.0 6271576.0 6322307.0 6576915.0 6642411.0 6672454.0\n 6675801.0 6689174.0 6695604.0 6709427.0 6717900.0 6784453.0 6911192.0\n 7032280.0 7042575.0 7045098.0 7060621.0 7099150.0 7194264.0 7312176.0\n 7432011.0 7461754.0 7755816.0 7760440.0 7940727.0 7967053.0 8007027.0\n 8201016.0 8271480.0 8321902.0 8368008.0 8442503.0 8582118.0 8594491.0\n 8747121.0 8868773.0 9172134.0 9212382.0 9217130.0 9221877.0 9226621.0\n 9236110.0 9245604.0 9250355.0 9255103.0 9259849.0 9264597.0 9269344.0\n 9326890.0 9331636.0 9336383.0 9341128.0 9345873.0 9350618.0 9355363.0\n 9360107.0 9364854.0 9369599.0 '.' 69402890.0 '.' 710469.0 '.' 89198108.0\n 89312437.0 89454155.0 89688073.0 89705816.0 89754025.0 89769745.0\n 89811442.0 89854613.0 90598802.0 90664447.0 90676163.0 '.' 292486.0 '.'\n 29855349.0 29892368.0 '.' '.' 33168896.0 '.' 38299243.0 '.' 72726531.0\n 72742163.0 72848107.0 72854735.0 72950685.0 72981866.0 73007531.0\n 73082160.0 73095247.0 73097926.0 73113539.0 73125646.0 73149398.0\n 73150423.0 73183326.0 73245325.0 73248919.0 73275488.0 73442502.0\n 73473234.0 73498133.0 73588685.0 73605527.0 73624335.0 73645831.0\n 73703736.0 73868235.0 74010294.0 74072043.0 74103270.0 '.' 7156265.0\n 7170243.0 7189908.0 7194636.0 7213038.0 7272376.0 7286409.0 7308124.0\n 7327829.0 7340025.0 7345200.0 7353432.0 7397148.0 7414221.0 7429516.0\n 7437165.0 7572964.0 7580612.0 7588260.0 7595908.0 7603555.0 7611203.0\n 7618851.0 7626498.0 7636112.0 7669241.0 7678525.0 7682660.0 7693957.0\n 7705529.0 7738913.0 7752198.0 '.' 7156265.0 7170243.0 7189908.0 7194636.0\n 7213038.0 7272376.0 7286409.0 7308124.0 7327829.0 7340025.0 7345200.0\n 7353432.0 7397148.0 7414221.0 7429516.0 7437165.0 7572964.0 7580612.0\n 7588260.0 7595908.0 7603555.0 7611203.0 7618851.0 7626498.0 7636112.0\n 7669241.0 7678525.0 7682660.0 7693957.0 7705529.0 7738913.0 7752198.0 '.'\n 56979812.0 56986397.0 56987150.0 57025500.0 57073467.0 57124347.0 '.'\n 140739967.0 '.' 53205458.0 53262057.0 53401069.0 53432604.0 53449821.0\n 53458208.0 53559056.0 53583183.0 53584152.0]' has dtype incompatible with float64, please explicitly cast to a compatible dtype first.\n  df.loc[:, df.columns != sample_col] = df.loc[:, df.columns != sample_col].fillna(\".\")\n/PROGS/EXTERN/AnnotSV/AnnotSV_dev/share/python3/variantconvert/src/variantconvert/converters/vcf_from_annotsv.py:59: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '['.' 149194269.0 '.' 196764537.0 196801319.0 '.' 248761001.0 '.'\n 47007881.0 47088320.0 47151400.0 47133898.0 47173994.0 47181688.0\n 47213477.0 47421238.0 47640844.0 '.' 66301069.0 66313519.0 '.' 64062273.0\n '.' 64062273.0 '.' 22951948.0 '.' 74025651.0 74010500.0 '.' '.'\n 20496811.0 20711433.0 20747114.0 20781026.0 20961480.0 21038198.0\n 21071643.0 21145662.0 21198633.0 21255165.0 21940739.0 22016878.0\n 22083259.0 22145802.0 22199978.0 22383564.0 22369561.0 22383813.0\n 22414398.0 22448881.0 22466547.0 22513280.0 22570831.0 22675241.0\n 22715728.0 22746002.0 '.' 20711433.0 20747114.0 20781026.0 20961480.0\n 21038198.0 21071643.0 21145662.0 21198633.0 21255165.0 21940739.0\n 22016878.0 22083259.0 22145802.0 22199978.0 22383564.0 22369561.0\n 22383813.0 '.' '.' 1662073.0 '.' 32199434.0 32199434.0 32267249.0\n 32301302.0 32626892.0 32687486.0 32896463.0 33208179.0 33232409.0\n 33264719.0 33319296.0 33586742.0 33966140.0 34294699.0 34404762.0\n 34431919.0 34479081.0 34626084.0 '.' 32626892.0 32687486.0 32896463.0\n 33208179.0 33232409.0 33264719.0 33319296.0 '.' 33586742.0 33966140.0\n 34294699.0 '.' 34626084.0 '.' 14111994.0 14140179.0 14252721.0 14209062.0\n 14935274.0 14955593.0 15009504.0 15168643.0 15155013.0 15244914.0\n 15370935.0 15466797.0 15374150.0 15466797.0 '.' 34503996.0 34524157.0\n 34540275.0 34592039.0 34625731.0 34757005.0 34808058.0 '.' 44302125.0\n 44274089.0 '.' 243020873.0 242919427.0 242948164.0 243026289.0 '.'\n 18899601.0 18923806.0 18935206.0 19018755.0 19017734.0 19109925.0\n 19035888.0 19132164.0 19120135.0 19137805.0 19160345.0 19166018.0\n 19279242.0 19419256.0 19423598.0 19435234.0 19439211.0 19466716.0\n 19508135.0 19512860.0 19554362.0 19710842.0 19712297.0 19712294.0\n 19754857.0 19842397.0 19842397.0 19929341.0 19957498.0 19951357.0\n 20004346.0 20054687.0 20020743.0 20099395.0 20073356.0 20073665.0\n 20104749.0 20102274.0 20114878.0 20114049.0 20135530.0 20138578.0\n 20192441.0 20196060.0 20255841.0 20236734.0 20307583.0 20350461.0\n 20362291.0 20368028.0 20380440.0 20398695.0 20461786.0 20484549.0\n 20656858.0 20706786.0 20762745.0 20792112.0 20850082.0 20941906.0\n 21046009.0 21058891.0 21213099.0 21142008.0 21245502.0 21308035.0\n 21318968.0 21335647.0 21353321.0 21356407.0 21364663.0 21368576.0\n 21382297.0 21386850.0 21388561.0 21398538.0 21418457.0 21476575.0 '.'\n 63110738.0 63602600.0 63535727.0 63650888.0 63799313.0 63834312.0\n 63849481.0 63847495.0 63989138.0 63898059.0 63997919.0 64009170.0\n 64001938.0 64088807.0 64073039.0 64253849.0 64092034.0 64187237.0\n 64441746.0 64673676.0 64575760.0 64997143.0 65179178.0 '.' 97520086.0 '.'\n 195438746.0 195426368.0 195460422.0 '.' 88096.0 157952.0 249774.0\n 299263.0 378657.0 344041.0 467998.0 492945.0 533989.0 570084.0 578655.0\n 664571.0 648989.0 668065.0 675817.0 682940.0 763877.0 775637.0 819917.0\n 926104.0 952444.0 967357.0 987192.0 998352.0 1020686.0 1107352.0\n 1126763.0 1116952.0 1202632.0 1202750.0 1212379.0 1242918.0 1246795.0\n 1333925.0 1381837.0 1400230.0 1686040.0 1714046.0 1723050.0 1746898.0\n 1810594.0 1857883.0 1983919.0 1976487.0 2010701.0 1988204.0 2045691.0\n 2070816.0 2243848.0 2243848.0 2263836.0 2251883.0 2420372.0 2464729.0\n 2517584.0 2734300.0 2758063.0 2842823.0 2931789.0 2936552.0 2952805.0\n 2965133.0 3042487.0 3076351.0 3245687.0 3258340.0 3441640.0 3451213.0\n 3503209.0 3534149.0 3592712.0 3679582.0 3770253.0 3957155.0 4228656.0\n 4249950.0 4291881.0 4323510.0 4420785.0 4543775.0 4483427.0 4712665.0\n 4666150.0 4789101.0 4852554.0 4865663.0 4990398.0 5021185.0 5502716.0\n 5529528.0 5710286.0 5816032.0 5894813.0 5925055.0 6020158.0 6202276.0\n 6071889.0 6235663.0 6304992.0 6474341.0 6625089.0 6644456.0 6675608.0\n 6677774.0 6692246.0 6698897.0 6711592.0 6719391.0 6885891.0 7034841.0\n 7047958.0 7044728.0 7059679.0 7069791.0 7105103.0 7744554.0 7312251.0\n 7436657.0 7461845.0 7780655.0 7941588.0 7942023.0 8160540.0 8007108.0\n 8242830.0 8308825.0 8325692.0 8442450.0 8478282.0 8591750.0 8621479.0\n 8749448.0 8873565.0 9178456.0 9213975.0 9218723.0 9223470.0 9228214.0\n 9237772.0 9247197.0 9251948.0 9256696.0 9261442.0 9266190.0 9270937.0\n 9328483.0 9333229.0 9337976.0 9342721.0 9347466.0 9352211.0 9356956.0\n 9361700.0 9366447.0 9370796.0 '.' 69442040.0 '.' 784844.0 '.' 89269817.0\n 89312537.0 89585888.0 89705573.0 89706486.0 89770588.0 89810374.0\n 89825401.0 90460254.0 90610219.0 90679134.0 90716532.0 '.' 351355.0 '.'\n 29858856.0 29894992.0 '.' '.' 33645680.0 '.' 38313237.0 '.' 72742085.0\n 72772634.0 72850450.0 72936623.0 72972020.0 72992909.0 73038852.0\n 73086440.0 73097783.0 73112542.0 73133999.0 73125727.0 73150330.0\n 73153132.0 73184600.0 73247020.0 73256846.0 73280220.0 73484237.0\n 73476610.0 73536855.0 73611426.0 73605624.0 73644164.0 73668729.0\n 73820265.0 74016931.0 74010353.0 74175022.0 74143256.0 '.' 7212885.0\n 7177618.0 7191501.0 7196229.0 7243080.0 7274385.0 7287870.0 7321064.0\n 7332604.0 7343922.0 7347115.0 7366833.0 7399972.0 7417234.0 7432528.0\n 7440175.0 7575975.0 7583623.0 7591271.0 7598918.0 7606566.0 7614214.0\n 7621862.0 7629510.0 7638935.0 7673238.0 7681402.0 7686575.0 7698764.0\n 7718465.0 7740185.0 7754238.0 '.' 7212885.0 7177618.0 7191501.0 7196229.0\n 7243080.0 7274385.0 7287870.0 7321064.0 7332604.0 7343922.0 7347115.0\n 7366833.0 7399972.0 7417234.0 7432528.0 7440175.0 7575975.0 7583623.0\n 7591271.0 7598918.0 7606566.0 7614214.0 7621862.0 7629510.0 7638935.0\n 7673238.0 7681402.0 7686575.0 7698764.0 7718465.0 7740185.0 7754238.0 '.'\n 56987065.0 56986460.0 56987833.0 57026541.0 57123832.0 57131368.0 '.'\n 141467843.0 '.' 53254389.0 53350548.0 53449603.0 53432697.0 53458063.0\n 53461317.0 53713664.0 53583302.0 53584235.0]' has dtype incompatible with float64, please explicitly cast to a compatible dtype first.\n  df.loc[:, df.columns != sample_col] = df.loc[:, df.columns != sample_col].fillna(\".\")\n/PROGS/EXTERN/AnnotSV/AnnotSV_dev/share/python3/variantconvert/src/variantconvert/converters/vcf_from_annotsv.py:59: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '['.' 164.0 '.' 8306.0 10442.0 '.' 7214.0 '.' 15861.0 4864.0 54947.0 564.0\n 16006.0 4482.0 20570.0 41519.0 735.0 '.' 1759.0 752.0 '.' 109581.0 '.'\n 109581.0 '.' 104141.0 '.' 20673.0 6654.0 '.' '.' 8815.0 97785.0 10021.0\n 13353.0 86684.0 75.0 30943.0 82.0 52867.0 46560.0 8226.0 2476.0 31407.0\n 12622.0 4396.0 105534.0 1084.0 1341.0 937.0 642.0 742.0 52.0 24267.0 94.0\n 13444.0 9757.0 '.' 97785.0 10021.0 13353.0 86684.0 75.0 30943.0 82.0\n 52867.0 46560.0 8226.0 2476.0 31407.0 12622.0 4396.0 105534.0 1084.0\n 1341.0 '.' '.' 5668.0 '.' 36002.0 18071.0 2643.0 435.0 15211.0 2636.0\n 7670.0 2633.0 17249.0 2638.0 21026.0 14899.0 96.0 29980.0 961.0 1790.0\n 36762.0 28298.0 '.' 15211.0 2636.0 7670.0 2633.0 17249.0 2638.0 21026.0\n '.' 14899.0 96.0 21129.0 '.' 28298.0 '.' 11876.0 1190.0 48324.0 2006.0\n 983.0 922.0 1203.0 35548.0 70.0 37786.0 31604.0 102735.0 526.0 36489.0\n '.' 10934.0 1890.0 1811.0 10955.0 1890.0 10887.0 10887.0 '.' 125255.0\n 3151.0 '.' 154953.0 6594.0 4805.0 36455.0 '.' 4766.0 23513.0 8225.0\n 60775.0 698.0 86127.0 2214.0 14373.0 1315.0 3300.0 1127.0 2925.0 112257.0\n 101036.0 3531.0 6826.0 4255.0 29283.0 40787.0 2314.0 710.0 8817.0 7555.0\n 1233.0 6557.0 71652.0 8729.0 66297.0 28204.0 82.0 46928.0 46055.0 82.0\n 31632.0 88.0 85.0 5352.0 66.0 11252.0 125.0 16204.0 2640.0 6190.0 2206.0\n 26904.0 78.0 5823.0 24042.0 11201.0 1818.0 2772.0 14965.0 6105.0 699.0\n 24739.0 17592.0 14305.0 13239.0 54277.0 80010.0 2167.0 3490.0 151121.0\n 13608.0 32208.0 36341.0 7589.0 16188.0 16736.0 3015.0 8453.0 6085.0\n 12844.0 3844.0 97.0 1858.0 18223.0 6815.0 '.' 22375.0 338617.0 126456.0\n 12538.0 71814.0 29338.0 29936.0 1175.0 105064.0 872.0 8222.0 12944.0\n 4299.0 35168.0 9003.0 175938.0 2889.0 14018.0 10814.0 172347.0 28739.0\n 326598.0 18565.0 '.' 3710.0 '.' 19578.0 97.0 12574.0 '.' 16544.0 33570.0\n 43386.0 34800.0 47055.0 96.0 48775.0 59169.0 40991.0 2416.0 7699.0\n 45210.0 2296.0 1841.0 7487.0 7323.0 64257.0 21407.0 41173.0 83040.0\n 26197.0 14683.0 5748.0 17521.0 15273.0 42087.0 19337.0 7968.0 41913.0\n 13180.0 8472.0 37686.0 3568.0 50247.0 40842.0 3511.0 44427.0 19589.0\n 5372.0 23651.0 15575.0 44678.0 110800.0 125.0 26252.0 94.0 1970.0 9763.0\n 170204.0 13773.0 14678.0 80.0 149049.0 44048.0 46752.0 195927.0 14689.0\n 22927.0 86219.0 4259.0 15533.0 25471.0 77190.0 28486.0 169280.0 7455.0\n 154023.0 7519.0 38177.0 28811.0 14117.0 4263.0 2142.0 13669.0 38204.0\n 12682.0 22454.0 31533.0 31957.0 123081.0 5580.0 168808.0 98.0 25615.0\n 6391.0 4272.0 67864.0 4873.0 449510.0 3233.0 146121.0 103105.0 72323.0\n 54.0 59057.0 174351.0 5186.0 33204.0 33416.0 152034.0 48174.0 2045.0\n 3154.0 1973.0 3072.0 3293.0 2165.0 1491.0 101438.0 123649.0 15678.0\n 2153.0 14581.0 9170.0 5953.0 550290.0 75.0 4646.0 91.0 24839.0 181148.0\n 1296.0 193487.0 81.0 41814.0 37345.0 3790.0 74442.0 35779.0 9632.0\n 26988.0 2327.0 4792.0 6322.0 1593.0 1593.0 1593.0 1593.0 1662.0 1593.0\n 1593.0 1593.0 1593.0 1593.0 1593.0 1593.0 1593.0 1593.0 1593.0 1593.0\n 1593.0 1593.0 1593.0 1593.0 1197.0 '.' 39150.0 '.' 53806.0 '.' 71709.0\n 100.0 131733.0 17500.0 670.0 16563.0 40629.0 13959.0 605641.0 11417.0\n 14687.0 40369.0 '.' 58869.0 '.' 3507.0 2624.0 '.' '.' 140.0 '.' 13994.0\n '.' 15507.0 30471.0 2343.0 81888.0 21335.0 11043.0 31321.0 4280.0 2536.0\n 14616.0 20460.0 81.0 932.0 2709.0 1274.0 1695.0 7927.0 4732.0 41735.0\n 3376.0 38722.0 22741.0 97.0 19829.0 22898.0 116529.0 148696.0 59.0\n 67347.0 36120.0 '.' 43395.0 7375.0 1593.0 1593.0 30042.0 2009.0 1461.0\n 12940.0 4775.0 3897.0 1915.0 13401.0 2824.0 3013.0 3012.0 3010.0 3011.0\n 3011.0 3011.0 3010.0 3011.0 3011.0 3011.0 3012.0 2823.0 3997.0 2877.0\n 3915.0 4807.0 12936.0 1272.0 1385.0 '.' 43395.0 7375.0 1593.0 1593.0\n 30042.0 2009.0 1461.0 12940.0 4775.0 3897.0 1915.0 13401.0 2824.0 3013.0\n 3012.0 3010.0 3011.0 3011.0 3011.0 3010.0 3011.0 3011.0 3011.0 3012.0\n 2823.0 3997.0 2877.0 3915.0 4807.0 12936.0 1272.0 1385.0 '.' 936.0 63.0\n 683.0 1041.0 50365.0 7021.0 '.' 26435.0 '.' 3736.0 88491.0 48534.0 93.0\n 8242.0 3109.0 154608.0 119.0 83.0]' has dtype incompatible with float64, please explicitly cast to a compatible dtype first.\n  df.loc[:, df.columns != sample_col] = df.loc[:, df.columns != sample_col].fillna(\".\")\n/PROGS/EXTERN/AnnotSV/AnnotSV_dev/share/python3/variantconvert/src/variantconvert/converters/vcf_from_annotsv.py:59: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '['.' 0.0 '.' 563.0 607.0 '.' 939.0 '.' 1449.0 1128.0 0.0 0.0 984.0 0.0 0.0\n 0.0 0.0 '.' 238.0 0.0 '.' 2277.0 '.' 2277.0 '.' 0.0 '.' 0.0 1266.0 '.'\n '.' 0.0 0.0 2175.0 0.0 0.0 0.0 1635.0 0.0 0.0 0.0 0.0 0.0 1635.0 0.0 0.0\n 0.0 942.0 951.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 2007.0 '.' 0.0 2175.0 0.0 0.0\n 0.0 1635.0 0.0 0.0 0.0 0.0 0.0 1635.0 0.0 0.0 0.0 942.0 951.0 '.' '.'\n 729.0 '.' 0.0 0.0 375.0 0.0 0.0 375.0 0.0 375.0 0.0 375.0 0.0 0.0 0.0 0.0\n 0.0 0.0 0.0 0.0 '.' 0.0 375.0 0.0 375.0 0.0 375.0 0.0 '.' 0.0 0.0 0.0 '.'\n 0.0 '.' 404.0 567.0 1173.0 0.0 0.0 0.0 0.0 483.0 0.0 1473.0 459.0 33.0\n 0.0 369.0 '.' 1650.0 282.0 312.0 1650.0 282.0 1650.0 1650.0 '.' 1431.0\n 0.0 '.' 0.0 0.0 0.0 0.0 '.' 392.0 1803.0 0.0 0.0 696.0 1653.0 0.0 1431.0\n 1077.0 618.0 0.0 957.0 4923.0 3054.0 621.0 318.0 0.0 924.0 1797.0 912.0\n 0.0 1110.0 0.0 621.0 1515.0 984.0 1095.0 1575.0 816.0 0.0 2889.0 1110.0\n 0.0 2322.0 0.0 0.0 1932.0 0.0 837.0 0.0 2337.0 1209.0 0.0 0.0 1422.0 0.0\n 663.0 0.0 0.0 678.0 1041.0 0.0 4920.0 699.0 0.0 0.0 1935.0 2607.0 1905.0\n 2367.0 0.0 0.0 6309.0 1500.0 777.0 912.0 0.0 1818.0 2523.0 930.0 0.0 0.0\n 1422.0 1908.0 0.0 0.0 1179.0 0.0 '.' 0.0 858.0 0.0 534.0 0.0 879.0 615.0\n 0.0 2838.0 0.0 0.0 1329.0 0.0 0.0 0.0 2535.0 0.0 0.0 0.0 5808.0 0.0 0.0\n 0.0 '.' 123.0 '.' 0.0 0.0 2130.0 '.' 1709.0 1239.0 0.0 1758.0 1425.0 0.0\n 0.0 2772.0 2952.0 1158.0 0.0 2565.0 0.0 210.0 522.0 1683.0 729.0 0.0\n 405.0 3936.0 1515.0 2829.0 2106.0 1962.0 1515.0 894.0 0.0 0.0 996.0 0.0\n 0.0 1326.0 0.0 1191.0 2130.0 1347.0 1197.0 813.0 1089.0 2517.0 2427.0\n 2220.0 4098.0 0.0 1587.0 0.0 288.0 909.0 2703.0 1812.0 630.0 0.0 2664.0\n 1941.0 573.0 4548.0 1290.0 1857.0 2400.0 1443.0 0.0 2574.0 1737.0 0.0\n 9429.0 837.0 4344.0 1989.0 1827.0 1074.0 0.0 0.0 1389.0 0.0 1839.0 498.0\n 1140.0 2298.0 585.0 1008.0 0.0 0.0 0.0 0.0 0.0 912.0 0.0 411.0 1245.0 0.0\n 3927.0 2979.0 2061.0 0.0 4527.0 2496.0 138.0 0.0 2673.0 1344.0 3030.0\n 384.0 0.0 360.0 0.0 288.0 384.0 654.0 4188.0 2082.0 0.0 1668.0 1263.0\n 654.0 0.0 3480.0 0.0 1566.0 0.0 0.0 2445.0 0.0 1938.0 0.0 4011.0 1362.0\n 0.0 2103.0 2274.0 1092.0 1959.0 0.0 1047.0 1395.0 1593.0 1593.0 1593.0\n 1593.0 1662.0 1593.0 1593.0 1593.0 1593.0 1593.0 1593.0 1593.0 1593.0\n 1593.0 1593.0 1593.0 1593.0 1593.0 0.0 1593.0 0.0 '.' 1593.0 '.' 1058.0\n '.' 0.0 0.0 0.0 576.0 0.0 840.0 672.0 921.0 18921.0 0.0 1245.0 0.0 '.'\n 618.0 '.' 0.0 0.0 '.' '.' 140.0 '.' 336.0 '.' 1464.0 984.0 1776.0 4452.0\n 642.0 1344.0 2559.0 756.0 681.0 897.0 867.0 0.0 0.0 921.0 663.0 630.0\n 738.0 798.0 2361.0 0.0 1944.0 747.0 0.0 732.0 1065.0 3141.0 2931.0 0.0\n 943.0 0.0 '.' 0.0 264.0 1593.0 1593.0 903.0 195.0 204.0 402.0 219.0 198.0\n 237.0 213.0 840.0 1395.0 1395.0 1395.0 1395.0 1395.0 1395.0 1395.0 1395.0\n 1395.0 1395.0 1395.0 840.0 213.0 237.0 198.0 219.0 402.0 204.0 58.0 '.'\n 0.0 264.0 1593.0 1593.0 903.0 195.0 204.0 402.0 219.0 198.0 237.0 213.0\n 840.0 1395.0 1395.0 1395.0 1395.0 1395.0 1395.0 1395.0 1395.0 1395.0\n 1395.0 1395.0 840.0 213.0 237.0 198.0 219.0 402.0 204.0 58.0 '.' 177.0\n 0.0 0.0 1041.0 1503.0 333.0 '.' 0.0 '.' 150.0 4467.0 3702.0 0.0 1140.0\n 786.0 13125.0 0.0 0.0]' has dtype incompatible with float64, please explicitly cast to a compatible dtype first.\n  df.loc[:, df.columns != sample_col] = df.loc[:, df.columns != sample_col].fillna(\".\")\n/PROGS/EXTERN/AnnotSV/AnnotSV_dev/share/python3/variantconvert/src/variantconvert/converters/vcf_from_annotsv.py:59: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '['.' 0.0 '.' 56.0 61.0 '.' 97.0 '.' 100.0 73.0 0.0 0.0 100.0 0.0 0.0 0.0\n 0.0 '.' 13.0 0.0 '.' 100.0 '.' 100.0 '.' 0.0 '.' 0.0 100.0 '.' '.' 0.0\n 0.0 100.0 0.0 0.0 0.0 100.0 0.0 0.0 0.0 0.0 0.0 100.0 0.0 0.0 0.0 95.0\n 100.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 100.0 '.' 0.0 100.0 0.0 0.0 0.0 100.0\n 0.0 0.0 0.0 0.0 0.0 100.0 0.0 0.0 0.0 95.0 100.0 '.' '.' 16.0 '.' 0.0 0.0\n 100.0 0.0 0.0 100.0 0.0 100.0 0.0 100.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0\n '.' 0.0 100.0 0.0 100.0 0.0 100.0 0.0 '.' 0.0 0.0 0.0 '.' 0.0 '.' 30.0\n 100.0 100.0 0.0 0.0 0.0 0.0 100.0 0.0 100.0 100.0 6.0 0.0 44.0 '.' 100.0\n 100.0 100.0 100.0 100.0 100.0 100.0 '.' 43.0 0.0 '.' 0.0 0.0 0.0 0.0 '.'\n 59.0 100.0 0.0 0.0 100.0 100.0 0.0 100.0 88.0 100.0 0.0 100.0 100.0 100.0\n 100.0 100.0 0.0 100.0 100.0 52.0 0.0 100.0 0.0 100.0 100.0 100.0 82.0\n 100.0 100.0 0.0 100.0 100.0 0.0 100.0 0.0 0.0 100.0 0.0 100.0 0.0 100.0\n 100.0 0.0 0.0 100.0 0.0 100.0 0.0 0.0 100.0 100.0 0.0 91.0 100.0 0.0 0.0\n 100.0 100.0 100.0 100.0 0.0 0.0 100.0 100.0 100.0 100.0 0.0 100.0 100.0\n 100.0 0.0 0.0 100.0 100.0 0.0 0.0 100.0 0.0 '.' 0.0 100.0 0.0 100.0 0.0\n 100.0 100.0 0.0 100.0 0.0 0.0 100.0 0.0 0.0 0.0 100.0 0.0 0.0 0.0 100.0\n 0.0 0.0 0.0 '.' 21.0 '.' 0.0 0.0 100.0 '.' 92.0 100.0 0.0 100.0 100.0 0.0\n 0.0 100.0 100.0 83.0 0.0 100.0 0.0 100.0 100.0 100.0 100.0 0.0 100.0\n 100.0 100.0 100.0 100.0 100.0 100.0 100.0 0.0 0.0 100.0 0.0 0.0 100.0 0.0\n 100.0 100.0 100.0 100.0 100.0 100.0 100.0 100.0 100.0 100.0 0.0 100.0 0.0\n 100.0 100.0 100.0 100.0 100.0 0.0 100.0 100.0 100.0 100.0 100.0 100.0\n 100.0 100.0 0.0 100.0 100.0 0.0 100.0 100.0 100.0 100.0 100.0 100.0 0.0\n 0.0 72.0 0.0 100.0 100.0 100.0 100.0 100.0 100.0 0.0 0.0 0.0 0.0 0.0\n 100.0 0.0 100.0 100.0 0.0 100.0 100.0 100.0 0.0 100.0 100.0 100.0 0.0\n 100.0 100.0 100.0 96.0 0.0 19.0 0.0 100.0 61.0 44.0 100.0 100.0 0.0 96.0\n 100.0 100.0 0.0 100.0 0.0 96.0 0.0 0.0 100.0 0.0 100.0 0.0 100.0 100.0\n 0.0 100.0 100.0 100.0 100.0 0.0 100.0 100.0 100.0 100.0 100.0 100.0 100.0\n 100.0 100.0 100.0 100.0 100.0 100.0 100.0 100.0 100.0 100.0 100.0 100.0\n 100.0 0.0 100.0 0.0 '.' 100.0 '.' 94.0 '.' 0.0 0.0 0.0 100.0 0.0 100.0\n 100.0 100.0 100.0 0.0 100.0 0.0 '.' 100.0 '.' 0.0 0.0 '.' '.' 5.0 '.'\n 100.0 '.' 100.0 100.0 84.0 100.0 100.0 100.0 100.0 100.0 95.0 100.0 100.0\n 0.0 0.0 100.0 75.0 42.0 100.0 100.0 100.0 0.0 100.0 100.0 0.0 100.0 100.0\n 100.0 100.0 0.0 31.0 0.0 '.' 0.0 100.0 100.0 100.0 100.0 100.0 100.0\n 100.0 100.0 100.0 100.0 100.0 100.0 100.0 100.0 100.0 100.0 100.0 100.0\n 100.0 100.0 100.0 100.0 100.0 100.0 100.0 100.0 100.0 100.0 100.0 100.0\n 29.0 '.' 0.0 100.0 100.0 100.0 100.0 100.0 100.0 100.0 100.0 100.0 100.0\n 100.0 100.0 100.0 100.0 100.0 100.0 100.0 100.0 100.0 100.0 100.0 100.0\n 100.0 100.0 100.0 100.0 100.0 100.0 100.0 100.0 29.0 '.' 41.0 0.0 0.0\n 100.0 100.0 100.0 '.' 0.0 '.' 3.0 100.0 100.0 0.0 100.0 100.0 100.0 0.0\n 0.0]' has dtype incompatible with float64, please explicitly cast to a compatible dtype first.\n  df.loc[:, df.columns != sample_col] = df.loc[:, df.columns != sample_col].fillna(\".\")\n/PROGS/EXTERN/AnnotSV/AnnotSV_dev/share/python3/variantconvert/src/variantconvert/converters/vcf_from_annotsv.py:59: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '['.' 1.0 '.' 6.0 6.0 '.' 2.0 '.' 4.0 2.0 4.0 1.0 12.0 3.0 8.0 7.0 5.0 '.'\n 17.0 5.0 '.' 22.0 '.' 22.0 '.' 5.0 '.' 18.0 3.0 '.' '.' 6.0 26.0 11.0\n 18.0 3.0 1.0 11.0 1.0 5.0 4.0 1.0 1.0 11.0 8.0 3.0 9.0 1.0 1.0 1.0 2.0\n 2.0 1.0 3.0 1.0 18.0 9.0 '.' 26.0 11.0 18.0 3.0 1.0 11.0 1.0 5.0 4.0 1.0\n 1.0 11.0 8.0 3.0 9.0 1.0 1.0 '.' '.' 31.0 '.' 25.0 14.0 2.0 1.0 8.0 2.0\n 9.0 2.0 6.0 2.0 5.0 3.0 1.0 11.0 1.0 1.0 4.0 7.0 '.' 8.0 2.0 9.0 2.0 6.0\n 2.0 5.0 '.' 3.0 1.0 11.0 '.' 7.0 '.' 7.0 3.0 2.0 1.0 3.0 1.0 2.0 5.0 1.0\n 9.0 4.0 7.0 1.0 6.0 '.' 14.0 3.0 3.0 14.0 3.0 14.0 14.0 '.' 16.0 2.0 '.'\n 4.0 6.0 1.0 4.0 '.' 5.0 14.0 2.0 6.0 3.0 10.0 1.0 10.0 1.0 3.0 1.0 8.0\n 33.0 25.0 4.0 3.0 2.0 12.0 20.0 1.0 1.0 12.0 12.0 2.0 7.0 8.0 3.0 18.0\n 6.0 1.0 20.0 9.0 1.0 14.0 1.0 1.0 12.0 1.0 6.0 1.0 11.0 9.0 4.0 1.0 2.0\n 1.0 5.0 12.0 2.0 6.0 9.0 15.0 1.0 1.0 9.0 7.0 6.0 14.0 7.0 18.0 1.0 8.0\n 55.0 5.0 5.0 3.0 2.0 21.0 21.0 4.0 2.0 3.0 12.0 5.0 1.0 2.0 10.0 6.0 '.'\n 7.0 6.0 5.0 5.0 9.0 7.0 8.0 2.0 13.0 1.0 3.0 9.0 2.0 3.0 4.0 8.0 4.0 4.0\n 4.0 40.0 3.0 6.0 5.0 '.' 9.0 '.' 5.0 1.0 4.0 '.' 8.0 6.0 2.0 4.0 4.0 1.0\n 3.0 3.0 13.0 1.0 3.0 22.0 3.0 4.0 9.0 10.0 12.0 3.0 4.0 28.0 11.0 23.0\n 3.0 14.0 7.0 10.0 3.0 4.0 8.0 4.0 6.0 9.0 2.0 9.0 14.0 2.0 5.0 8.0 4.0\n 16.0 18.0 14.0 22.0 1.0 11.0 1.0 4.0 3.0 26.0 6.0 6.0 1.0 13.0 16.0 8.0\n 21.0 6.0 13.0 16.0 12.0 4.0 18.0 16.0 4.0 67.0 3.0 18.0 15.0 10.0 8.0 3.0\n 3.0 1.0 4.0 6.0 5.0 10.0 8.0 6.0 11.0 4.0 6.0 1.0 3.0 4.0 2.0 3.0 4.0\n 12.0 4.0 22.0 21.0 14.0 1.0 12.0 21.0 2.0 4.0 8.0 9.0 19.0 3.0 2.0 1.0\n 3.0 2.0 2.0 1.0 9.0 14.0 4.0 1.0 2.0 4.0 2.0 27.0 1.0 1.0 1.0 2.0 18.0\n 1.0 21.0 1.0 18.0 9.0 4.0 18.0 11.0 3.0 11.0 3.0 2.0 7.0 1.0 1.0 1.0 1.0\n 1.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0 '.'\n 7.0 '.' 14.0 '.' 6.0 1.0 6.0 6.0 2.0 2.0 8.0 3.0 90.0 5.0 8.0 3.0 '.' 7.0\n '.' 8.0 1.0 '.' '.' 23.0 '.' 4.0 '.' 7.0 9.0 1.0 19.0 7.0 7.0 17.0 4.0\n 1.0 13.0 10.0 1.0 4.0 6.0 1.0 1.0 6.0 3.0 34.0 2.0 16.0 7.0 1.0 13.0 11.0\n 17.0 27.0 1.0 35.0 4.0 '.' 7.0 2.0 1.0 1.0 7.0 2.0 2.0 3.0 2.0 2.0 3.0\n 2.0 4.0 4.0 4.0 4.0 4.0 4.0 4.0 4.0 4.0 4.0 4.0 4.0 4.0 2.0 3.0 2.0 2.0\n 3.0 2.0 2.0 '.' 7.0 2.0 1.0 1.0 7.0 2.0 2.0 3.0 2.0 2.0 3.0 2.0 4.0 4.0\n 4.0 4.0 4.0 4.0 4.0 4.0 4.0 4.0 4.0 4.0 4.0 2.0 3.0 2.0 2.0 3.0 2.0 2.0\n '.' 6.0 1.0 2.0 1.0 4.0 5.0 '.' 23.0 '.' 26.0 15.0 25.0 1.0 8.0 6.0 84.0\n 1.0 1.0]' has dtype incompatible with float64, please explicitly cast to a compatible dtype first.\n  df.loc[:, df.columns != sample_col] = df.loc[:, df.columns != sample_col].fillna(\".\")\n/PROGS/EXTERN/AnnotSV/AnnotSV_dev/share/python3/variantconvert/src/variantconvert/converters/vcf_from_annotsv.py:59: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '['.' '.' '.' 1114.0 327.0 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' 53.0\n '.' 0.0 90.0 '.' '.' '.' '.' '.' '.' '.' 3130.0 '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' 488.0 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' 82.0 '.' '.' '.' 4580.0 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n 7032.0 '.' 7032.0 '.' '.' '.' '.' '.' '.' '.' '.' '.' 37.0 '.' '.'\n 41134.0 '.' '.' '.' '.' 597.0 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' 6098.0 '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' 0.0 '.' 2859.0 '.' '.' '.' 12103.0 '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' 6214.0 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' 0.0 '.' '.' '.' 928.0 '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' 3733.0 2349.0 '.' 9797.0 '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' 412.0 '.' 9797.0 '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' 412.0 '.' 124.0 '.' '.' '.' '.' '.' '.' 1187.0 '.' 555.0\n '.' '.' '.' '.' '.' '.' '.' '.']' has dtype incompatible with float64, please explicitly cast to a compatible dtype first.\n  df.loc[:, df.columns != sample_col] = df.loc[:, df.columns != sample_col].fillna(\".\")\n/PROGS/EXTERN/AnnotSV/AnnotSV_dev/share/python3/variantconvert/src/variantconvert/converters/vcf_from_annotsv.py:59: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '['.' 149194105.0 '.' 196756231.0 196788860.0 '.' 248753787.0 '.'\n 46992020.0 47083456.0 47096453.0 47133334.0 47157988.0 47177206.0\n 47192907.0 47379719.0 47590260.0 '.' 66287088.0 66288095.0 '.' 63952692.0\n '.' 63952692.0 '.' 22847807.0 '.' 74001651.0 74003846.0 '.' '.'\n 20487996.0 20613648.0 20737093.0 20767673.0 20874796.0 21038123.0\n 21040700.0 21145580.0 21145766.0 21208605.0 21932513.0 22014402.0\n 22051852.0 22133180.0 22195582.0 22278030.0 22368477.0 22382472.0\n 22413461.0 22448239.0 22465805.0 22513228.0 22546564.0 22675147.0\n 22702284.0 22736245.0 '.' 20613648.0 20737093.0 20767673.0 20874796.0\n 21038123.0 21040700.0 21145580.0 21145766.0 21208605.0 21932513.0\n 22014402.0 22051852.0 22133180.0 22195582.0 22278030.0 22368477.0\n 22382472.0 '.' '.' 1565629.0 '.' 32163432.0 32181363.0 32264606.0\n 32300867.0 32611681.0 32684850.0 32888793.0 33205546.0 33215160.0\n 33262081.0 33298270.0 33571843.0 33966044.0 34264719.0 34403801.0\n 34430129.0 34442319.0 34597786.0 '.' 32611681.0 32684850.0 32888793.0\n 33205546.0 33215160.0 33262081.0 33298270.0 '.' 33571843.0 33966044.0\n 34264719.0 '.' 34597786.0 '.' 14100118.0 14138989.0 14204397.0 14207056.0\n 14934291.0 14954671.0 15008301.0 15133095.0 15154943.0 15207128.0\n 15339331.0 15339331.0 15373624.0 15405577.0 '.' 34493062.0 34522267.0\n 34538464.0 34581084.0 34623841.0 34746118.0 34797171.0 '.' 44171888.0\n 44270938.0 '.' 242865920.0 242912833.0 242943359.0 242989834.0 '.'\n 18894835.0 18900293.0 18926981.0 18957980.0 19017036.0 19023798.0\n 19033674.0 19117791.0 19118820.0 19134505.0 19159218.0 19163093.0\n 19166985.0 19318220.0 19420067.0 19428408.0 19434956.0 19437433.0\n 19467348.0 19510546.0 19553652.0 19702025.0 19704742.0 19711061.0\n 19748300.0 19770745.0 19833668.0 19863044.0 19929294.0 19951275.0\n 19957418.0 20008632.0 20020661.0 20067763.0 20073268.0 20073580.0\n 20099397.0 20102208.0 20103626.0 20113924.0 20119326.0 20135938.0\n 20186251.0 20193854.0 20228937.0 20236656.0 20301760.0 20326419.0\n 20351090.0 20366210.0 20377668.0 20383730.0 20455681.0 20483850.0\n 20632119.0 20689194.0 20748440.0 20778873.0 20795805.0 20861896.0\n 21043842.0 21055401.0 21061978.0 21128400.0 21213294.0 21271694.0\n 21311379.0 21319459.0 21336585.0 21353392.0 21356210.0 21362491.0\n 21369453.0 21383006.0 21388464.0 21396680.0 21400234.0 21457304.0 '.'\n 63088363.0 63263983.0 63409271.0 63638350.0 63727499.0 63804974.0\n 63819545.0 63846320.0 63884074.0 63897187.0 63989697.0 63996226.0\n 63997639.0 64053639.0 64064036.0 64077911.0 64089145.0 64173219.0\n 64430932.0 64501329.0 64547021.0 64670545.0 65160613.0 '.' 97483364.0 '.'\n 195419168.0 195426271.0 195447848.0 '.' 71552.0 124382.0 206388.0\n 264463.0 331602.0 343945.0 419223.0 433776.0 492998.0 567668.0 570956.0\n 619361.0 646693.0 666224.0 668330.0 675617.0 699620.0 754230.0 778744.0\n 843064.0 926247.0 952674.0 981444.0 980831.0 1005413.0 1065265.0\n 1107426.0 1108984.0 1160719.0 1189570.0 1203907.0 1205232.0 1243227.0\n 1283678.0 1340995.0 1396719.0 1641613.0 1694457.0 1717678.0 1723247.0\n 1795019.0 1813205.0 1873119.0 1976362.0 1984449.0 1988110.0 2043721.0\n 2061053.0 2073644.0 2230075.0 2249158.0 2251803.0 2271323.0 2420681.0\n 2470832.0 2538373.0 2743374.0 2819896.0 2845570.0 2932293.0 2937272.0\n 2939662.0 2965297.0 3047865.0 3076407.0 3250885.0 3287617.0 3443694.0\n 3465032.0 3505338.0 3578595.0 3675319.0 3768111.0 3943486.0 4190452.0\n 4237268.0 4269427.0 4291977.0 4388828.0 4420694.0 4477847.0 4543857.0\n 4666052.0 4763486.0 4846163.0 4861391.0 4922534.0 5016312.0 5053206.0\n 5526295.0 5564165.0 5712927.0 5822490.0 5925001.0 5961101.0 6027925.0\n 6066703.0 6202459.0 6271576.0 6322307.0 6576915.0 6642411.0 6672454.0\n 6675801.0 6689174.0 6695604.0 6709427.0 6717900.0 6784453.0 6911192.0\n 7032280.0 7042575.0 7045098.0 7060621.0 7099150.0 7194264.0 7312176.0\n 7432011.0 7461754.0 7755816.0 7760440.0 7940727.0 7967053.0 8007027.0\n 8201016.0 8271480.0 8321902.0 8368008.0 8442503.0 8582118.0 8594491.0\n 8747121.0 8868773.0 9172134.0 9212382.0 9217130.0 9221877.0 9226621.0\n 9236110.0 9245604.0 9250355.0 9255103.0 9259849.0 9264597.0 9269344.0\n 9326890.0 9331636.0 9336383.0 9341128.0 9345873.0 9350618.0 9355363.0\n 9360107.0 9364854.0 9369599.0 '.' 69402890.0 '.' 723194.0 '.' 89198108.0\n 89312437.0 89454155.0 89688073.0 89705816.0 89754025.0 89769745.0\n 89811442.0 89854613.0 90598802.0 90664447.0 90676163.0 '.' 292486.0 '.'\n 29855349.0 29892368.0 '.' '.' 33397467.0 '.' 38299243.0 '.' 72726578.0\n 72742163.0 72848107.0 72854735.0 72950685.0 72981866.0 73007531.0\n 73082160.0 73095247.0 73097926.0 73113539.0 73125646.0 73149398.0\n 73150423.0 73183326.0 73245325.0 73248919.0 73275488.0 73442502.0\n 73473234.0 73498133.0 73588685.0 73605527.0 73624335.0 73645831.0\n 73703736.0 73868235.0 74010294.0 74072043.0 74103270.0 '.' 7169490.0\n 7170243.0 7189908.0 7194636.0 7213038.0 7272376.0 7286409.0 7308124.0\n 7327829.0 7340025.0 7345200.0 7353432.0 7397148.0 7414221.0 7429516.0\n 7437165.0 7572964.0 7580612.0 7588260.0 7595908.0 7603555.0 7611203.0\n 7618851.0 7626498.0 7636112.0 7669241.0 7678525.0 7682660.0 7693957.0\n 7705529.0 7738913.0 7752198.0 '.' 7169490.0 7170243.0 7189908.0 7194636.0\n 7213038.0 7272376.0 7286409.0 7308124.0 7327829.0 7340025.0 7345200.0\n 7353432.0 7397148.0 7414221.0 7429516.0 7437165.0 7572964.0 7580612.0\n 7588260.0 7595908.0 7603555.0 7611203.0 7618851.0 7626498.0 7636112.0\n 7669241.0 7678525.0 7682660.0 7693957.0 7705529.0 7738913.0 7752198.0 '.'\n 56986129.0 56986397.0 56987150.0 57025500.0 57073467.0 57124347.0 '.'\n 141035363.0 '.' 53250653.0 53262057.0 53401069.0 53432604.0 53449821.0\n 53458208.0 53559056.0 53583183.0 53584152.0]' has dtype incompatible with float64, please explicitly cast to a compatible dtype first.\n  df.loc[:, df.columns != sample_col] = df.loc[:, df.columns != sample_col].fillna(\".\")\n/PROGS/EXTERN/AnnotSV/AnnotSV_dev/share/python3/variantconvert/src/variantconvert/converters/vcf_from_annotsv.py:59: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '['.' 149194269.0 '.' 196764537.0 196799302.0 '.' 248761001.0 '.'\n 47007881.0 47088320.0 47151400.0 47133898.0 47173994.0 47181688.0\n 47213477.0 47421238.0 47590995.0 '.' 66288847.0 66288847.0 '.' 64062273.0\n '.' 64062273.0 '.' 22951948.0 '.' 74022324.0 74010500.0 '.' '.'\n 20496811.0 20711433.0 20747114.0 20781026.0 20961480.0 21038198.0\n 21071643.0 21145662.0 21198633.0 21255165.0 21940739.0 22016878.0\n 22083259.0 22145802.0 22199978.0 22383564.0 22369561.0 22383813.0\n 22414398.0 22448881.0 22466547.0 22513280.0 22570831.0 22675241.0\n 22715728.0 22746002.0 '.' 20711433.0 20747114.0 20781026.0 20961480.0\n 21038198.0 21071643.0 21145662.0 21198633.0 21255165.0 21940739.0\n 22016878.0 22083259.0 22145802.0 22199978.0 22383564.0 22369561.0\n 22383813.0 '.' '.' 1571297.0 '.' 32199434.0 32199434.0 32267249.0\n 32301302.0 32626892.0 32687486.0 32896463.0 33208179.0 33232409.0\n 33264719.0 33319296.0 33586742.0 33966140.0 34294699.0 34404762.0\n 34431919.0 34479081.0 34626084.0 '.' 32626892.0 32687486.0 32896463.0\n 33208179.0 33232409.0 33264719.0 33319296.0 '.' 33586742.0 33966140.0\n 34285848.0 '.' 34626084.0 '.' 14111994.0 14140179.0 14252721.0 14209062.0\n 14935274.0 14955593.0 15009504.0 15168643.0 15155013.0 15244914.0\n 15370935.0 15442066.0 15374150.0 15442066.0 '.' 34503996.0 34524157.0\n 34540275.0 34592039.0 34625731.0 34757005.0 34808058.0 '.' 44297143.0\n 44274089.0 '.' 243020873.0 242919427.0 242948164.0 243026289.0 '.'\n 18899601.0 18923806.0 18935206.0 19018755.0 19017734.0 19109925.0\n 19035888.0 19132164.0 19120135.0 19137805.0 19160345.0 19166018.0\n 19279242.0 19419256.0 19423598.0 19435234.0 19439211.0 19466716.0\n 19508135.0 19512860.0 19554362.0 19710842.0 19712297.0 19712294.0\n 19754857.0 19842397.0 19842397.0 19929341.0 19957498.0 19951357.0\n 20004346.0 20054687.0 20020743.0 20099395.0 20073356.0 20073665.0\n 20104749.0 20102274.0 20114878.0 20114049.0 20135530.0 20138578.0\n 20192441.0 20196060.0 20255841.0 20236734.0 20307583.0 20350461.0\n 20362291.0 20368028.0 20380440.0 20398695.0 20461786.0 20484549.0\n 20656858.0 20706786.0 20762745.0 20792112.0 20850082.0 20941906.0\n 21046009.0 21058891.0 21213099.0 21142008.0 21245502.0 21308035.0\n 21318968.0 21335647.0 21353321.0 21356407.0 21364663.0 21368576.0\n 21382297.0 21386850.0 21388561.0 21398538.0 21418457.0 21464119.0 '.'\n 63110738.0 63602600.0 63535727.0 63650888.0 63799313.0 63834312.0\n 63849481.0 63847495.0 63989138.0 63898059.0 63997919.0 64009170.0\n 64001938.0 64088807.0 64073039.0 64253849.0 64092034.0 64187237.0\n 64441746.0 64673676.0 64575760.0 64997143.0 65179178.0 '.' 97487074.0 '.'\n 195438746.0 195426368.0 195460422.0 '.' 88096.0 157952.0 249774.0\n 299263.0 378657.0 344041.0 467998.0 492945.0 533989.0 570084.0 578655.0\n 664571.0 648989.0 668065.0 675817.0 682940.0 763877.0 775637.0 819917.0\n 926104.0 952444.0 967357.0 987192.0 998352.0 1020686.0 1107352.0\n 1126763.0 1116952.0 1202632.0 1202750.0 1212379.0 1242918.0 1246795.0\n 1333925.0 1381837.0 1400230.0 1686040.0 1714046.0 1723050.0 1746898.0\n 1810594.0 1857883.0 1983919.0 1976487.0 2010701.0 1988204.0 2045691.0\n 2070816.0 2243848.0 2243848.0 2263836.0 2251883.0 2420372.0 2464729.0\n 2517584.0 2734300.0 2758063.0 2842823.0 2931789.0 2936552.0 2952805.0\n 2965133.0 3042487.0 3076351.0 3245687.0 3258340.0 3441640.0 3451213.0\n 3503209.0 3534149.0 3592712.0 3679582.0 3770253.0 3957155.0 4228656.0\n 4249950.0 4291881.0 4323510.0 4420785.0 4543775.0 4483427.0 4712665.0\n 4666150.0 4789101.0 4852554.0 4865663.0 4990398.0 5021185.0 5502716.0\n 5529528.0 5710286.0 5816032.0 5894813.0 5925055.0 6020158.0 6202276.0\n 6071889.0 6235663.0 6304992.0 6474341.0 6625089.0 6644456.0 6675608.0\n 6677774.0 6692246.0 6698897.0 6711592.0 6719391.0 6885891.0 7034841.0\n 7047958.0 7044728.0 7059679.0 7069791.0 7105103.0 7744554.0 7312251.0\n 7436657.0 7461845.0 7780655.0 7941588.0 7942023.0 8160540.0 8007108.0\n 8242830.0 8308825.0 8325692.0 8442450.0 8478282.0 8591750.0 8621479.0\n 8749448.0 8873565.0 9178456.0 9213975.0 9218723.0 9223470.0 9228214.0\n 9237772.0 9247197.0 9251948.0 9256696.0 9261442.0 9266190.0 9270937.0\n 9328483.0 9333229.0 9337976.0 9342721.0 9347466.0 9352211.0 9356956.0\n 9361700.0 9366447.0 9370796.0 '.' 69442040.0 '.' 777000.0 '.' 89269817.0\n 89312537.0 89585888.0 89705573.0 89706486.0 89770588.0 89810374.0\n 89825401.0 90460254.0 90610219.0 90679134.0 90716532.0 '.' 351355.0 '.'\n 29858856.0 29894992.0 '.' '.' 33397607.0 '.' 38313237.0 '.' 72742085.0\n 72772634.0 72850450.0 72936623.0 72972020.0 72992909.0 73038852.0\n 73086440.0 73097783.0 73112542.0 73133999.0 73125727.0 73150330.0\n 73153132.0 73184600.0 73247020.0 73256846.0 73280220.0 73484237.0\n 73476610.0 73536855.0 73611426.0 73605624.0 73644164.0 73668729.0\n 73820265.0 74016931.0 74010353.0 74139390.0 74139390.0 '.' 7212885.0\n 7177618.0 7191501.0 7196229.0 7243080.0 7274385.0 7287870.0 7321064.0\n 7332604.0 7343922.0 7347115.0 7366833.0 7399972.0 7417234.0 7432528.0\n 7440175.0 7575975.0 7583623.0 7591271.0 7598918.0 7606566.0 7614214.0\n 7621862.0 7629510.0 7638935.0 7673238.0 7681402.0 7686575.0 7698764.0\n 7718465.0 7740185.0 7753583.0 '.' 7212885.0 7177618.0 7191501.0 7196229.0\n 7243080.0 7274385.0 7287870.0 7321064.0 7332604.0 7343922.0 7347115.0\n 7366833.0 7399972.0 7417234.0 7432528.0 7440175.0 7575975.0 7583623.0\n 7591271.0 7598918.0 7606566.0 7614214.0 7621862.0 7629510.0 7638935.0\n 7673238.0 7681402.0 7686575.0 7698764.0 7718465.0 7740185.0 7753583.0 '.'\n 56987065.0 56986460.0 56987833.0 57026541.0 57123832.0 57131368.0 '.'\n 141061798.0 '.' 53254389.0 53350548.0 53449603.0 53432697.0 53458063.0\n 53461317.0 53713664.0 53583302.0 53584235.0]' has dtype incompatible with float64, please explicitly cast to a compatible dtype first.\n  df.loc[:, df.columns != sample_col] = df.loc[:, df.columns != sample_col].fillna(\".\")\n/PROGS/EXTERN/AnnotSV/AnnotSV_dev/share/python3/variantconvert/src/variantconvert/converters/vcf_from_annotsv.py:59: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '['.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.']' has dtype incompatible with float64, please explicitly cast to a compatible dtype first.\n  df.loc[:, df.columns != sample_col] = df.loc[:, df.columns != sample_col].fillna(\".\")\n/PROGS/EXTERN/AnnotSV/AnnotSV_dev/share/python3/variantconvert/src/variantconvert/converters/vcf_from_annotsv.py:59: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '['.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.']' has dtype incompatible with float64, please explicitly cast to a compatible dtype first.\n  df.loc[:, df.columns != sample_col] = df.loc[:, df.columns != sample_col].fillna(\".\")\n/PROGS/EXTERN/AnnotSV/AnnotSV_dev/share/python3/variantconvert/src/variantconvert/converters/vcf_from_annotsv.py:59: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '['.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.']' has dtype incompatible with float64, please explicitly cast to a compatible dtype first.\n  df.loc[:, df.columns != sample_col] = df.loc[:, df.columns != sample_col].fillna(\".\")\n/PROGS/EXTERN/AnnotSV/AnnotSV_dev/share/python3/variantconvert/src/variantconvert/converters/vcf_from_annotsv.py:59: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '['.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.']' has dtype incompatible with float64, please explicitly cast to a compatible dtype first.\n  df.loc[:, df.columns != sample_col] = df.loc[:, df.columns != sample_col].fillna(\".\")\n/PROGS/EXTERN/AnnotSV/AnnotSV_dev/share/python3/variantconvert/src/variantconvert/converters/vcf_from_annotsv.py:59: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '['.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' 14.0\n 14.0 7.0 1.0 1.0 1.0 1.0 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' 14.0 14.0 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' 60.0 1.0 '.' '.' '.' '.' '.' '.' 59.0 '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' 26.0 26.0 '.' '.' '.' '.' '.' '.' 626.0\n '.' 11.0 '.' '.' '.' '.' '.' '.' '.' '.' '.' 9.0 '.' '.' '.' '.' '.' '.'\n 10.0 3.0 '.' '.' 8.0 8.0 27.0 '.' '.' '.' 1.0 '.' '.' 27.0 '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' 3.0 '.' '.' '.' '.' 8.0 '.' 15.0 '.' '.' '.' 502.0 '.'\n '.' '.' '.' '.' '.' '.' '.' '.' 2.0 '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' 2.0 '.' '.' '.' '.' '.' '.' '.' 5.0 5.0 '.' '.'\n '.' '.' 1051.0 '.' '.' '.' '.' '.' '.' '.' '.' 61.0 '.' '.' 96.0 12.0 '.'\n '.' '.' '.' '.' 1.0 '.' '.' '.' 21.0 213.0 '.' '.' '.' '.' '.' '.' 1.0\n 1.0 '.' '.' 2.0 '.' '.' '.' '.' '.' 39.0 '.' 32.0 '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' 8.0 '.' '.' '.' '.' '.' '.' 4.0 '.' '.'\n '.' 76.0 2.0 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n 12.0 '.' '.' '.' '.' 199.0 161.0 '.' '.' '.' 1.0 '.' '.' 142.0 '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' 1.0 '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' 435.0 '.' '.' '.' '.' '.' '.' '.' '.' 435.0 '.' '.' '.'\n '.' '.' '.' '.' '.' '.' 2.0 2.0 '.' '.' 127.0 '.' 1.0 '.' '.' '.' '.' '.'\n '.' 1.0 '.' 1.0 '.' '.' '.' '.' '.' '.' '.' 124.0 18.0 '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' 277.0 6.0 136.0 118.0 '.' '.' 4.0\n 13.0 '.' '.']' has dtype incompatible with float64, please explicitly cast to a compatible dtype first.\n  df.loc[:, df.columns != sample_col] = df.loc[:, df.columns != sample_col].fillna(\".\")\n/PROGS/EXTERN/AnnotSV/AnnotSV_dev/share/python3/variantconvert/src/variantconvert/converters/vcf_from_annotsv.py:59: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '[0.08 0.08 0.1822 0.1822 0.1822 '.' '.' 0.11 0.9544 0.11 0.11 0.9544 0.11\n 0.11 0.11 0.11 0.11 '.' '.' '.' '.' 0.0257 '.' 0.0257 '.' 0.02 0.1799\n 0.1799 0.1799 0.0828 0.15 0.39 0.39 0.39 0.39 0.39 0.39 0.39 0.39 0.39\n 0.39 0.39 0.39 0.39 0.39 0.39 0.39 0.4271 0.4271 0.4271 0.4271 0.4271\n 0.4271 0.4271 0.15 0.15 0.15 0.39 0.39 0.39 0.39 0.39 0.39 0.39 0.39 0.39\n 0.39 0.39 0.39 0.39 0.39 0.39 0.39 0.4271 0.4271 0.0144 '.' '.' '.'\n 0.1314 0.1314 0.1314 0.1314 0.8086 0.3314 0.3314 0.3314 0.3314 0.3314\n 0.515 0.515 0.07 0.06 0.06 0.09 0.09 0.1875 0.07 0.8086 0.3314 0.3314\n 0.3314 0.3314 0.3314 0.515 '.' 0.515 0.07 0.06 0.1875 0.1875 '.' '.' '.'\n '.' '.' 0.272 0.272 0.272 '.' '.' '.' '.' '.' '.' '.' 0.03 0.1041 0.1041\n 0.0994 0.0994 0.0994 0.0994 0.03 0.17 0.17 0.5406 '.' '.' '.' '.' 0.0951\n '.' 0.0355 0.0355 0.0355 0.01 0.01 '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' 0.0509 0.0509\n 0.0509 0.0509 0.0509 0.0509 0.0509 0.0509 0.0509 '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' 0.01 0.01 0.01 0.01 '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' 0.03 0.4682 0.4682 0.0556 '.' 0.01 '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' 0.1145 0.1145 0.1145 0.1145 0.1145 0.1145 0.1145 0.1145\n 0.1145 0.1145 0.1145 0.1145 0.1145 0.1145 0.1145 0.1145 0.1145 0.1145\n 0.1145 0.1145 0.1145 0.1145 0.4178 0.4178 0.1231 0.1231 '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' 0.6839 0.6839 0.1073 0.1073 0.1073\n 0.3704 '.' '.' 0.01 0.01 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' 0.2355 0.2355 0.2355 0.2355 0.2355 0.2355 0.2355 0.2355 0.2355 0.2355\n 0.2355 0.2355 0.2355 0.2355 0.2355 0.2355 0.2355 0.2355 0.2355 0.2355\n 0.2355 0.2355 0.2355 0.2355 0.2355 0.2355 0.2355 0.2355 0.2355 0.2355\n 0.2355 0.2355 0.2355 0.2355 0.2355 0.2355 0.2355 0.2355 0.2355 0.2355\n 0.2355 0.2355 0.2355 0.2355 0.2355 0.2355 0.2355 0.2355 0.2355 0.2355\n 0.2355 0.2355 0.2355 0.2355 0.2355 0.2355 0.2355 0.2355 0.2355 0.2355\n 0.2355 0.2355 0.2355 0.2355 0.2355 0.2355 '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.']' has dtype incompatible with float64, please explicitly cast to a compatible dtype first.\n  df.loc[:, df.columns != sample_col] = df.loc[:, df.columns != sample_col].fillna(\".\")\n/PROGS/EXTERN/AnnotSV/AnnotSV_dev/share/python3/variantconvert/src/variantconvert/converters/vcf_from_annotsv.py:59: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '[0.3041 0.3041 0.4486 0.4486 0.4486 0.2767 0.2767 0.026 0.026 0.026 0.026\n 0.026 0.04 0.04 0.04 0.026 0.0318 '.' '.' '.' '.' 0.01 '.' 0.01 '.'\n 0.0107 0.8135 0.8135 0.8135 0.2438 0.1 0.271 0.271 0.271 0.271 0.271\n 0.271 0.271 0.271 0.271 0.271 0.13 0.13 0.13 0.13 0.13 0.13 0.13 0.13\n 0.13 0.13 0.13 0.13 0.13 0.1 0.1 0.1 0.13 0.271 0.271 0.271 0.271 0.271\n 0.271 0.271 0.271 0.271 0.13 0.13 0.13 0.13 0.13 0.13 0.13 0.13 0.168 '.'\n '.' '.' 0.1692 0.1692 0.23 0.23 0.23 0.23 0.1692 0.0715 0.0715 0.1243\n 0.1243 0.1243 0.05 0.01 0.01 0.01 '.' 0.01 0.0715 0.23 0.23 0.1692 0.0715\n 0.0715 0.1243 0.1243 '.' 0.1243 0.05 0.01 0.01 0.01 0.01 0.01 0.01 0.01\n 0.01 0.01 0.01 0.01 0.01 0.01 0.01 0.01 0.01 0.01 0.01 '.' 0.0982 0.15\n 0.15 0.0982 0.1 0.0982 '.' 0.07 0.07 0.2994 0.0686 0.0686 0.0686 0.0804\n 0.0804 '.' 0.01 0.01 0.01 0.01 0.01 0.01 0.01 0.01 0.01 0.01 0.01 0.01\n 0.01 0.01 0.01 0.01 0.01 0.01 0.01 0.01 0.01 0.01 0.01 0.01 0.01 0.01\n 0.01 0.01 0.01 0.01 0.01 0.01 0.01 0.01 0.01 0.01 0.01 0.01 0.01 0.01\n 0.01 0.01 0.01 0.01 0.01 0.01 0.01 0.0959 0.0959 0.0959 0.0284 0.0189\n 0.03 0.03 0.0118 0.0604 0.01 0.01 0.01 0.01 0.01 0.01 0.01 0.01 0.01 0.01\n 0.01 0.01 0.01 0.01 0.01 0.01 0.01 0.01 0.01 0.01 0.01 0.01 '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' 0.01 0.01 0.03 0.0746 0.0746 0.0746 '.' 0.01 0.01 0.01 0.01\n '.' 0.01 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' 0.01 0.01 0.01 0.01 '.' '.' '.' '.' '.' '.' '.' '.' '.' 0.01 0.01\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' 0.01 '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' 0.01 0.01 '.' '.'\n 0.01 '.' '.' '.' '.' '.' '.' '.' '.' 0.01 0.01 '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' 0.01 0.01 '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' 1.0 1.0 1.0 1.0 1.0 0.013 0.013 0.013 0.013 0.013\n 0.013 0.013 0.013 0.013 0.013 0.013 0.013 0.013 0.013 0.013 0.013 0.013\n 0.8518 0.8518 0.0497 0.0497 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' 0.187 0.187 0.4519 0.4519 0.4519 0.4631 '.' '.' '.' 0.01 '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' 0.01 '.' '.' '.' '.'\n 0.01 '.' 0.01 0.01 0.01 0.01 '.' '.' '.' '.' '.' 0.2237 0.2237 0.2237\n 0.2237 0.2237 0.2237 0.2237 0.2237 0.2237 0.2237 0.2237 0.2237 0.2237\n 0.2237 0.5803 0.4842 0.4842 0.2237 0.2237 0.2237 0.2237 0.2237 0.2237\n 0.2237 0.2237 0.2237 0.2237 0.2237 0.2237 0.2237 0.2237 0.3262 0.5182\n 0.2237 0.2237 0.2237 0.2237 0.2237 0.2237 0.2237 0.2237 0.2237 0.2237\n 0.2237 0.2237 0.2237 0.2237 0.5803 0.4842 0.4842 0.2237 0.2237 0.2237\n 0.2237 0.2237 0.2237 0.2237 0.2237 0.2237 0.2237 0.2237 0.2237 0.2237\n 0.2237 0.3262 0.5182 '.' '.' '.' '.' '.' '.' '.' 0.01 0.01 '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.']' has dtype incompatible with float64, please explicitly cast to a compatible dtype first.\n  df.loc[:, df.columns != sample_col] = df.loc[:, df.columns != sample_col].fillna(\".\")\n/PROGS/EXTERN/AnnotSV/AnnotSV_dev/share/python3/variantconvert/src/variantconvert/converters/vcf_from_annotsv.py:59: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '['.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.']' has dtype incompatible with float64, please explicitly cast to a compatible dtype first.\n  df.loc[:, df.columns != sample_col] = df.loc[:, df.columns != sample_col].fillna(\".\")\n/PROGS/EXTERN/AnnotSV/AnnotSV_dev/share/python3/variantconvert/src/variantconvert/converters/vcf_from_annotsv.py:59: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '['.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.']' has dtype incompatible with float64, please explicitly cast to a compatible dtype first.\n  df.loc[:, df.columns != sample_col] = df.loc[:, df.columns != sample_col].fillna(\".\")\n/PROGS/EXTERN/AnnotSV/AnnotSV_dev/share/python3/variantconvert/src/variantconvert/converters/vcf_from_annotsv.py:59: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '['.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.']' has dtype incompatible with float64, please explicitly cast to a compatible dtype first.\n  df.loc[:, df.columns != sample_col] = df.loc[:, df.columns != sample_col].fillna(\".\")\n/PROGS/EXTERN/AnnotSV/AnnotSV_dev/share/python3/variantconvert/src/variantconvert/converters/vcf_from_annotsv.py:59: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '[0.4999 0.4999 0.3095 0.3095 0.3095 0.4394 0.4394 0.0179 0.0179 0.0179\n 0.0179 0.0179 0.0179 0.0179 0.0179 0.0179 0.0179 0.432 0.432 0.432 0.107\n 0.107 0.107 0.107 '.' '.' 0.0264 0.0264 0.0264 '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' 0.157 0.157 0.157 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' 0.4996 0.4996 0.4996 0.4996 0.4996 0.4996\n 0.4996 0.4996 0.4996 0.4996 0.4996 0.4996 0.4996 0.4996 0.4996 0.4996\n 0.4996 0.4996 0.4996 0.4996 0.4996 0.4996 0.4996 0.4996 0.4996 0.4996\n 0.4996 0.4996 0.4996 0.4996 0.4996 0.4996 0.4996 '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' 0.2252 0.2252 0.2252 0.2252 0.2252\n 0.2252 0.2252 0.2252 0.2252 0.2252 0.2252 '.' '.' '.' '.' '.' 0.1686\n 0.1686 0.1686 0.1686 0.4801 0.4801 0.4801 0.4801 0.4801 0.4801 0.4801\n 0.4801 0.4801 0.4801 0.4801 0.4801 0.4801 0.4801 0.4801 0.4801 0.4801\n 0.4801 0.4801 0.4801 0.4801 0.4801 0.4801 0.4801 0.4801 0.4801 0.4801\n 0.4801 0.4801 0.4801 0.4801 0.4801 0.4801 0.4801 0.4801 0.4801 0.4801\n 0.4801 0.4801 0.4801 0.4801 0.4801 0.4801 0.1686 0.1686 0.1686 0.1686\n 0.1686 0.1686 0.1686 0.1686 0.1686 0.1686 0.1686 0.1686 0.1686 0.1686\n 0.1686 0.1686 0.1686 0.1686 0.1686 0.1686 0.1686 0.1686 0.1686 0.1686\n 0.1686 0.1686 0.1686 0.1686 0.1686 0.1686 0.1686 0.1686 0.3422 0.3422\n 0.3422 0.3422 0.3422 0.3422 0.3422 0.3422 0.3422 0.3422 0.3422 0.3422\n 0.3422 0.3422 0.3422 0.3422 0.3422 0.3422 0.3422 0.3422 0.3422 0.3422\n 0.3422 0.3422 0.3422 0.3422 0.1142 0.1142 0.1142 0.1142 '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' 0.0144 0.0144 0.0144 0.0144 0.0144 0.0144 0.0144 0.0144 0.0144 0.0144\n 0.0144 0.0144 0.0144 0.0144 0.0144 0.0144 0.1474 0.1474 0.1474 0.1474\n 0.1474 0.1474 0.1474 0.1474 0.1474 0.1474 0.1474 0.1474 0.1474 0.1474\n 0.1474 0.1474 0.1474 0.1474 0.1474 0.1474 0.1474 0.1474 0.1474 0.1474\n 0.1474 0.1474 0.1474 0.1474 0.1474 0.1474 0.1474 0.1474 0.1474 0.1474\n 0.1474 0.1474 0.1474 0.1474 0.1474 0.1474 0.1474 0.1474 0.1474 0.1474\n 0.1474 0.1474 0.1474 0.1474 0.1474 0.1474 0.1474 0.1474 0.1474 0.1474\n 0.1474 0.1474 0.1474 0.1474 0.1474 0.1474 0.1474 0.1474 0.1474 0.1474\n 0.1474 0.1474 0.1474 0.1474 0.1474 0.1474 0.1474 0.1474 0.1474 0.1474\n 0.1474 0.1474 0.1474 0.1474 0.1474 0.1474 0.1474 0.1946 0.1946 0.2771\n 0.2771 0.5483 0.5483 0.5483 0.5483 0.5483 0.5483 0.5483 0.5483 0.5483\n 0.5483 0.5483 0.5483 0.5483 '.' '.' 0.3871 0.3871 0.3871 0.1414 0.381\n 0.381 0.381 0.381 0.5 0.5 0.5 0.5 0.5 0.5 0.5 0.5 0.5 0.5 0.5 0.5 0.5 0.5\n 0.5 0.5 0.5 0.5 0.5 0.5 0.5 0.5 0.5 0.5 0.5 0.5 0.5 0.5 0.5 0.5 0.5 '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' 0.128 0.128 0.128 0.128 0.128 0.128 0.128 0.128 0.128 0.128]' has dtype incompatible with float64, please explicitly cast to a compatible dtype first.\n  df.loc[:, df.columns != sample_col] = df.loc[:, df.columns != sample_col].fillna(\".\")\n/PROGS/EXTERN/AnnotSV/AnnotSV_dev/share/python3/variantconvert/src/variantconvert/converters/vcf_from_annotsv.py:59: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '['.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.']' has dtype incompatible with float64, please explicitly cast to a compatible dtype first.\n  df.loc[:, df.columns != sample_col] = df.loc[:, df.columns != sample_col].fillna(\".\")\n/PROGS/EXTERN/AnnotSV/AnnotSV_dev/share/python3/variantconvert/src/variantconvert/converters/vcf_from_annotsv.py:59: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '['.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.']' has dtype incompatible with float64, please explicitly cast to a compatible dtype first.\n  df.loc[:, df.columns != sample_col] = df.loc[:, df.columns != sample_col].fillna(\".\")\n/PROGS/EXTERN/AnnotSV/AnnotSV_dev/share/python3/variantconvert/src/variantconvert/converters/vcf_from_annotsv.py:59: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '['.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.']' has dtype incompatible with float64, please explicitly cast to a compatible dtype first.\n  df.loc[:, df.columns != sample_col] = df.loc[:, df.columns != sample_col].fillna(\".\")\n/PROGS/EXTERN/AnnotSV/AnnotSV_dev/share/python3/variantconvert/src/variantconvert/converters/vcf_from_annotsv.py:59: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '['.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.']' has dtype incompatible with float64, please explicitly cast to a compatible dtype first.\n  df.loc[:, df.columns != sample_col] = df.loc[:, df.columns != sample_col].fillna(\".\")\n/PROGS/EXTERN/AnnotSV/AnnotSV_dev/share/python3/variantconvert/src/variantconvert/converters/vcf_from_annotsv.py:59: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '[0.455 '.' 0.35 '.' '.' 0.305 '.' 0.415 '.' '.' '.' '.' '.' '.' '.' '.'\n '.' 0.565 '.' '.' 0.53 '.' 0.53 '.' 0.25 '.' 0.42 '.' '.' 0.355 0.38 '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' 0.31 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' 0.34 0.52 '.' 0.225 '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' 0.255 '.' '.' '.' '.' '.'\n '.' '.' 0.43 '.' '.' '.' 0.385 '.' 0.505 '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' 0.435 '.' '.' '.' '.' '.' '.' '.' 0.38 '.' '.'\n 0.4 '.' '.' '.' '.' 0.445 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' 0.355 '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n 0.455 '.' 0.47 '.' '.' '.' 0.445 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' 0.4 '.' 0.395 '.' 0.335 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' 0.365 '.' 0.375 '.' '.' 0.325 0.325 '.' 0.365 '.' 0.37 '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' 0.26 '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' 0.26 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' 0.41 '.' '.' '.' '.' '.' '.' 0.535 '.' 0.42 '.' '.' '.' '.'\n '.' '.' '.' '.' '.']' has dtype incompatible with float64, please explicitly cast to a compatible dtype first.\n  df.loc[:, df.columns != sample_col] = df.loc[:, df.columns != sample_col].fillna(\".\")\n/PROGS/EXTERN/AnnotSV/AnnotSV_dev/share/python3/variantconvert/src/variantconvert/converters/vcf_from_annotsv.py:59: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '[0.44 '.' 0.285 '.' '.' 0.33 '.' 0.5 '.' '.' '.' '.' '.' '.' '.' '.' '.'\n 0.545 '.' '.' 0.43 '.' 0.43 '.' 0.39 '.' 0.38 '.' '.' 0.425 0.455 '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' 0.275 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' 0.66 0.5 '.' 0.335 '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' 0.275 '.' '.' '.' '.' '.' '.'\n '.' 0.365 '.' '.' '.' 0.335 '.' 0.42 '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' 0.515 '.' '.' '.' '.' '.' '.' '.' 0.46 '.' '.' 0.46\n '.' '.' '.' '.' 0.32 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' 0.43 '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' 0.335\n '.' 0.415 '.' '.' '.' 0.425 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n 0.365 '.' 0.58 '.' 0.275 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n 0.315 '.' 0.51 '.' '.' 0.27 0.37 '.' 0.32 '.' 0.355 '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' 0.33 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' 0.33 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' 0.33 '.' '.' '.' '.' '.' '.' 0.38 '.' 0.295 '.' '.' '.' '.' '.' '.'\n '.' '.' '.']' has dtype incompatible with float64, please explicitly cast to a compatible dtype first.\n  df.loc[:, df.columns != sample_col] = df.loc[:, df.columns != sample_col].fillna(\".\")\n/PROGS/EXTERN/AnnotSV/AnnotSV_dev/share/python3/variantconvert/src/variantconvert/converters/vcf_from_annotsv.py:59: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '['.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.']' has dtype incompatible with float64, please explicitly cast to a compatible dtype first.\n  df.loc[:, df.columns != sample_col] = df.loc[:, df.columns != sample_col].fillna(\".\")\n/PROGS/EXTERN/AnnotSV/AnnotSV_dev/share/python3/variantconvert/src/variantconvert/converters/vcf_from_annotsv.py:59: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '['.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.']' has dtype incompatible with float64, please explicitly cast to a compatible dtype first.\n  df.loc[:, df.columns != sample_col] = df.loc[:, df.columns != sample_col].fillna(\".\")\n/PROGS/EXTERN/AnnotSV/AnnotSV_dev/share/python3/variantconvert/src/variantconvert/converters/vcf_from_annotsv.py:59: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '['.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.']' has dtype incompatible with float64, please explicitly cast to a compatible dtype first.\n  df.loc[:, df.columns != sample_col] = df.loc[:, df.columns != sample_col].fillna(\".\")\n/PROGS/EXTERN/AnnotSV/AnnotSV_dev/share/python3/variantconvert/src/variantconvert/converters/vcf_from_annotsv.py:59: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '['.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' 30.0 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' 3.0 30.0 '.' '.' '.' '.' '.' '.' 3.0 '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' 3.0 3.0 '.' '.' '.' '.' '.' '.' 1.0 '.'\n 30.0 '.' '.' '.' '.' '.' '.' '.' '.' '.' 30.0 '.' 0.0 '.' '.' '.' '.' '.'\n '.' '.' '.' '.' 30.0 1.0 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' 30.0 '.' '.' '.' '.' '.' '.' 30.0 1.0 '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' 30.0 '.' '.' '.' '.' 3.0\n '.' '.' '.' '.' 30.0 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' 30.0 0.0 '.' '.' '.' '.' '.' '.' '.' '.' '.' 30.0 '.'\n '.' '.' '.' '.' 0.0 0.0 3.0 '.' 0.0 '.' '.' 30.0 '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' 30.0 30.0 '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' 3.0 '.' '.' '.' '.'\n 30.0 '.' '.' '.' '.' '.' '.' '.' 0.0 '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' 30.0 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' 3.0 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' 3.0 '.' 0.0 '.' '.' '.' '.' '.' 0.0 '.' 0.0 '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' 0.0 '.' '.' '.' '.' '.' '.' 30.0\n 3.0 3.0 3.0 3.0 '.' '.' 0.0 0.0 '.' '.']' has dtype incompatible with float64, please explicitly cast to a compatible dtype first.\n  df.loc[:, df.columns != sample_col] = df.loc[:, df.columns != sample_col].fillna(\".\")\n/PROGS/EXTERN/AnnotSV/AnnotSV_dev/share/python3/variantconvert/src/variantconvert/converters/vcf_from_annotsv.py:59: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '['.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' 0.0 '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' 0.0 '.' '.' '.' '.' '.' '.' '.' '.'\n 0.0 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' 0.0 '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' 0.0 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' 0.0 '.' '.' '.' '.' '.' '.' '.' 0.0 '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' 0.0 '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' 0.0 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' 0.0 0.0 0.0 '.' 0.0 '.' '.' 0.0 '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' 0.0 '.' '.' '.' '.'\n 0.0 '.' '.' '.' '.' '.' '.' '.' 0.0 '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' 0.0 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' 0.0 '.' 0.0 '.' '.' '.' '.' '.' 0.0 '.' 0.0 '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' 0.0 '.' '.' '.' '.' '.' '.' 0.0\n '.' 0.0 0.0 0.0 '.' '.' 0.0 0.0 '.' '.']' has dtype incompatible with float64, please explicitly cast to a compatible dtype first.\n  df.loc[:, df.columns != sample_col] = df.loc[:, df.columns != sample_col].fillna(\".\")\n/PROGS/EXTERN/AnnotSV/AnnotSV_dev/share/python3/variantconvert/src/variantconvert/converters/vcf_from_annotsv.py:59: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '['.' '.' 98.26 98.26 92.58 92.08 92.08 89.5 82.54 66.73 '.' '.' 75.66 89.5\n '.' '.' '.' 67.28 40.7 67.28 81.13 81.13 81.13 81.13 '.' '.' 85.75 85.75\n 79.11 '.' 93.81 '.' '.' 93.81 '.' '.' '.' 92.58 '.' '.' '.' '.' '.' 91.86\n '.' '.' '.' 76.23 75.33 '.' '.' '.' '.' '.' '.' '.' 93.48 93.81 '.' 93.81\n '.' '.' '.' 92.58 '.' '.' '.' '.' '.' 91.86 '.' '.' '.' 76.23 75.33 '.'\n 69.24 69.24 94.39 '.' '.' 92.49 '.' '.' 94.39 '.' 91.96 '.' 92.24 '.' '.'\n '.' '.' '.' '.' '.' '.' 94.39 '.' 94.39 '.' 91.96 '.' 92.24 '.' '.' '.'\n '.' '.' '.' '.' 96.58 60.22 96.58 42.95 '.' '.' '.' '.' 40.48 '.' 59.06\n 86.77 52.33 '.' 49.2 94.43 94.43 88.85 84.65 '.' 88.49 93.12 93.73 16.23\n 16.23 '.' '.' '.' '.' '.' '.' 97.89 61.1 45.38 '.' '.' '.' 39.12 '.' '.'\n 33.13 65.74 '.' 46.07 72.86 19.48 54.99 70.45 '.' '.' 8.4 50.93 '.' '.'\n '.' 78.01 4.92 48.57 '.' 72.21 40.8 '.' 54.56 51.91 '.' 5.07 '.' '.'\n 68.23 '.' 8.76 '.' 37.82 '.' '.' '.' 35.77 '.' 79.33 97.89 '.' 94.16 '.'\n '.' 90.21 '.' '.' '.' 86.28 70.17 41.2 24.41 '.' '.' 35.17 68.88 61.36\n 4.35 '.' 38.59 32.82 50.87 '.' '.' 76.26 74.02 '.' '.' '.' '.' 68.54 '.'\n 27.35 '.' 66.14 '.' 68.54 7.39 '.' 17.72 '.' '.' 8.63 '.' '.' '.' 19.72\n '.' '.' '.' 31.58 '.' '.' '.' 10.16 10.16 95.22 '.' '.' 95.22 '.' 93.0\n '.' '.' 90.28 89.36 '.' '.' 96.95 73.18 '.' '.' 31.26 '.' '.' 77.92 '.'\n 41.81 '.' 57.56 66.55 72.33 68.02 74.45 69.73 61.34 88.48 '.' '.' 77.93\n '.' '.' 30.46 '.' 7.13 81.41 80.2 86.49 41.08 60.14 92.5 6.4 63.78 '.'\n '.' 62.86 '.' '.' 40.87 74.11 46.58 51.38 '.' 65.21 '.' 46.49 63.75 81.36\n 63.94 46.84 74.85 '.' 76.1 77.79 '.' 7.59 38.82 76.68 76.94 75.35 81.97\n 93.6 '.' 68.35 '.' 80.7 73.9 65.63 89.21 '.' 39.55 '.' '.' '.' '.' '.'\n 1.21 '.' 76.44 39.31 96.4 74.81 72.76 43.19 '.' 98.01 52.99 '.' '.' 33.79\n 50.29 83.66 78.84 '.' '.' '.' 89.8 84.97 72.47 62.19 58.66 '.' '.' 53.19\n 50.3 '.' 69.5 '.' 96.06 '.' '.' 70.06 '.' 63.64 '.' 89.77 70.02 '.' 82.99\n 87.71 91.64 75.68 '.' 66.38 98.14 88.87 92.38 91.28 93.57 88.6 91.84 91.4\n 89.82 92.3 93.14 90.3 94.26 92.83 92.3 93.97 94.31 95.78 94.78 '.' 94.83\n '.' 87.45 87.45 98.37 98.37 38.97 '.' '.' '.' 5.94 '.' 38.68 38.97 28.58\n 25.58 '.' 10.63 '.' 38.68 38.68 '.' '.' '.' '.' 17.13 17.13 '.' '.' 88.46\n 55.55 65.69 46.95 23.74 28.63 30.81 36.45 64.11 80.16 '.' 22.82 '.' '.'\n 76.55 33.46 23.72 '.' '.' 8.62 '.' 19.66 21.78 '.' 88.46 14.42 47.98\n 47.51 '.' 33.5 '.' 99.72 '.' '.' '.' '.' 91.1 99.72 85.97 89.4 95.66\n 93.29 90.95 91.71 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n 92.48 90.61 90.45 96.98 97.15 93.4 97.87 99.72 '.' '.' '.' '.' 91.1 99.72\n 85.97 89.4 95.66 93.29 90.95 91.71 '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' 92.48 90.61 90.45 96.98 97.15 93.4 97.87 78.38 29.1 '.'\n '.' 78.38 15.18 47.62 53.39 53.39 75.6 11.71 26.16 14.23 '.' 75.6 21.63\n 10.58 '.' '.']' has dtype incompatible with float64, please explicitly cast to a compatible dtype first.\n  df.loc[:, df.columns != sample_col] = df.loc[:, df.columns != sample_col].fillna(\".\")\n/PROGS/EXTERN/AnnotSV/AnnotSV_dev/share/python3/variantconvert/src/variantconvert/converters/vcf_from_annotsv.py:59: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '['.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n -0.648300458519823 -0.648300458519823 -1.23986898178133 '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n -1.52736818830718 -1.52736818830718 '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' -2.62354415217069 -2.62354415217069\n -2.62354415217069 -2.62354415217069 '.' '.' '.' '.' -2.62354415217069 '.'\n -2.62354415217069 -2.62354415217069 -2.62354415217069 '.'\n -2.62354415217069 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' -0.807902299547855 '.' '.' '.' '.' '.' '.' '.' '.'\n -2.62354415217069 '.' '.' -2.62354415217069 -2.62354415217069\n -2.51547904504873 -2.62354415217069 -2.53806827104914 '.' '.'\n -2.57292784443109 '.' '.' '.' '.' '.' -2.62354415217069 -2.62354415217069\n '.' -2.62354415217069 -2.62354415217069 '.' -2.62354415217069\n -2.62354415217069 '.' -2.46581011772843 '.' '.' -2.62354415217069 '.'\n -2.62354415217069 '.' -2.62354415217069 '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' -1.30437956536809 -1.42333559636086\n -1.60479766897668 '.' '.' '.' '.' -1.06265755233802 -1.39880243235913\n -0.928255048107525 '.' -1.14442881641699 -1.25119505668143\n -1.44618961523547 '.' '.' -1.8606303493434 -0.807902299547855 '.' '.' '.'\n '.' 0.730304227093642 '.' '.' '.' 0.0947592166796515 '.' '.'\n 0.226822637024357 '.' 0.730304227093642 '.' '.' 0.167507008532066 '.' '.'\n '.' 0.557303960601498 '.' '.' '.' -1.39811826175974 '.' '.' '.'\n 0.309918017790144 0.309918017790144 '.' '.' '.' '.' 1.29231994213647 '.'\n '.' '.' 0.287750339613682 -0.117374836114298 '.' '.' '.'\n 0.208571775574472 '.' '.' -1.62508422066579 '.' '.' -2.62354415217069 '.'\n 1.08104400698142 '.' 0.307891021887021 1.00920516918233 0.68130369659025\n 0.720690705407562 0.0296456908307138 -1.6058292542185 0.15762668797229\n -1.10887487197032 '.' '.' 0.386184284132793 '.' '.' 0.372261467334061 '.'\n 0.506320833777115 '.' '.' '.' -0.996144409589105 '.' -0.738565549612952\n -0.683349552436101 0.214548231055587 '.' '.' 0.0789021097033232 '.' '.'\n 0.098456637925367 1.28008098953073 0.701548607121356 0.152551047660427\n '.' -0.0027219090002731 '.' 0.675314441657105 0.047435784931723\n 0.0037689132250533 0.0147924168443993 0.415100440885564 0.411355639726539\n '.' '.' -1.99297870008351 '.' -0.672019089975884 '.' 0.764664139864726\n -2.62354415217069 '.' -0.901439467568047 '.' '.' '.' '.'\n 0.337011959699387 '.' -1.04982790537607 -0.48130989574319\n -0.025549754331335 0.843231894587517 '.' '.' '.' '.' '.' 0.15460042661567\n '.' -0.6295570831736 -0.246593908057665 '.' -0.675336787286134\n -2.57221447207538 -2.45831687825306 '.' 0.369490376960693\n 0.975078008148592 '.' '.' 0.279433736423428 0.338434929038259\n -1.20308868163847 0.686792213866423 '.' '.' '.' -0.0213485169134644\n 0.629248196007981 '.' 0.495223937339359 0.38643088540431 '.' '.'\n 0.052084742182682 0.649976625334672 '.' 1.29231994213647 '.'\n -0.246463271906552 '.' '.' -2.62354415217069 '.' 0.337838438332487 '.'\n -0.370323251116391 -0.536935947037787 '.' -2.37227679543374\n -2.36525961978995 -2.62354415217069 -2.62354415217069 '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' 0.855259196084686 '.' '.' '.' 0.855259196084686 '.'\n -0.0315707309390069 0.478729015674934 '.' '.' '.' 0.745040589608255 '.'\n '.' '.' '.' '.' '.' '.' -2.43637392050626 -2.43637392050626 '.' '.'\n 1.77201404347458 '.' '.' 0.247827425263201 1.02239565516008\n 1.05583278690403 -0.199291215312469 0.942636989769333 '.'\n 0.717396479665947 '.' 0.950800964625408 '.' '.' 0.643446275430498\n 0.332553044404404 0.563064431580096 '.' '.' 0.1188507761401 '.'\n 0.623604739936053 0.339580839486745 '.' 0.592710857132059\n 0.200864992787726 1.014608801418 1.77201404347458 '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' 0.98432298330431 0.98432298330431 '.'\n '.' 0.159444434408663 0.393657994766781 0.447428062348521\n 0.107633755409335 0.107633755409335 '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.']' has dtype incompatible with float64, please explicitly cast to a compatible dtype first.\n  df.loc[:, df.columns != sample_col] = df.loc[:, df.columns != sample_col].fillna(\".\")\n/PROGS/EXTERN/AnnotSV/AnnotSV_dev/share/python3/variantconvert/src/variantconvert/converters/vcf_from_annotsv.py:59: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '['.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n 0.663432885116562 0.663432885116562 0.616417349113344 '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n -0.448946429663129 -0.448946429663129 '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' -0.276965016632095 -2.20885612270982\n -2.20416703243077 -0.276965016632095 '.' '.' '.' '.' -1.55852578268999\n '.' -1.25885348060374 -2.24141606178004 -2.53125239294469 '.'\n -2.53125239294469 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' -1.20830830104818 '.' '.' '.' '.' '.' '.' '.' '.'\n -2.53125239294469 '.' '.' -2.53125239294469 -2.53125239294469\n -2.53125239294469 -2.53125239294469 -2.53125239294469 '.' '.'\n -2.53125239294469 '.' '.' '.' '.' '.' -2.53125239294469 -2.53125239294469\n '.' -2.53125239294469 -2.53125239294469 '.' -2.53125239294469\n -2.53125239294469 '.' -2.53125239294469 '.' '.' -2.53125239294469 '.'\n -2.53125239294469 '.' -2.53125239294469 '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' -1.89912490049618 -1.93669033911618\n -1.94085802577819 '.' '.' '.' '.' -1.49456297636655 -1.53414994058354\n -1.20830830104818 '.' -1.26664892202732 -1.28020537251329\n -1.52989215323949 '.' '.' -1.51336493990188 -1.26588610868392 '.' '.' '.'\n '.' 1.22944963357105 '.' '.' '.' -0.338299474644844 '.' '.'\n -2.4455441384945 '.' 0.636006512326363 '.' '.' 0.979835184836382 '.' '.'\n '.' 1.22944963357105 '.' '.' '.' -0.477054147176997 '.' '.' '.'\n -0.416168538751037 -0.416168538751037 '.' '.' '.' '.' 1.20702378077388\n '.' '.' '.' 0.450417704041247 -1.63248668554434 '.' '.' '.'\n -1.00399823985698 '.' '.' -0.147567114346182 '.' '.' -2.53125239294469\n '.' 0.21167380707342 '.' -0.276081088005473 -1.32268830826731\n -0.684900012122083 -0.962987167732907 -0.811800830743971\n -1.19882139820352 -0.095835364724166 -0.266612828851805 '.' '.'\n -0.507819648222944 '.' '.' -0.687680790971782 '.' -1.33825481458672 '.'\n '.' '.' -0.44060461568473 '.' -1.04002887445022 -0.392116289350703\n -0.175454101774909 '.' '.' 0.586448065563417 '.' '.' 0.547035422647778\n -0.213680271829885 -0.365908352795815 -0.352633837012323 '.'\n -0.788064481059993 '.' -0.278968200252929 0.578303279433319\n 0.175301121417126 -0.755069155443864 -0.0353582367682211\n 0.128499204561582 '.' '.' -1.29609278714656 '.' 1.20702378077388 '.'\n 0.714317785060336 0.291115018050139 '.' -1.0008332959639 '.' '.' '.' '.'\n 0.333342940376347 '.' 0.837810587333259 0.452744382601107\n 0.153242929586267 0.108678775214296 '.' '.' '.' '.' '.' 0.172845644735031\n '.' 0.0670299843738293 0.0285262483698947 '.' -0.144705826949755\n -0.38737545040403 -0.486186941840208 '.' 0.371330581311454\n 0.865866943304307 '.' '.' 0.30418592454869 0.422718688109719\n -0.039423685654856 0.236901723651345 '.' '.' '.' -0.684657921159283\n 0.195831367621135 '.' -0.201270287076057 0.788716334548764 '.' '.'\n -0.284361515719772 -1.27240513662323 '.' 0.27620541213653 '.'\n -0.572766431683099 '.' '.' -0.232673834093773 '.' -0.499016330621921 '.'\n -0.462112374732113 -0.623131034083341 '.' -0.95101441383295\n -1.15479952515637 -1.33186842996177 -1.41032367542656 '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' 1.02927857149332 '.' '.' '.' 1.02927857149332 '.'\n 0.414676882744812 0.798950378312061 '.' '.' '.' 1.00834122048279 '.' '.'\n '.' '.' '.' '.' '.' -2.53125239294469 -2.53125239294469 '.' '.'\n 0.0159631069818757 '.' '.' -1.18776035129969 0.0159631069818757\n -0.553040364632404 -0.922199212243606 -0.774220086661663 '.'\n -0.500797326082256 '.' -0.794674734358171 '.' '.' -0.675433866559718\n -0.966715148489597 -0.809178554455325 '.' '.' -1.61408470478924 '.'\n -0.79212126645541 -0.49261121282204 '.' -0.653878691847743\n -0.430045328414053 -0.895566510532316 -0.0325005901648791 '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' 0.46663829854876\n -0.0464637247715686 '.' '.' 0.46663829854876 -2.53125239294469\n 0.400234098889925 -1.97676981971355 -1.97676981971355 '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.']' has dtype incompatible with float64, please explicitly cast to a compatible dtype first.\n  df.loc[:, df.columns != sample_col] = df.loc[:, df.columns != sample_col].fillna(\".\")\n/PROGS/EXTERN/AnnotSV/AnnotSV_dev/share/python3/variantconvert/src/variantconvert/converters/vcf_from_annotsv.py:59: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '['.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n 0.155145712015149 0.155145712015149 -0.188374414893838 '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n -0.844654865976432 -0.844654865976432 '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' -1.64032033771268 -2.47162789907313\n -2.47162789907313 -1.64032033771268 '.' '.' '.' '.' -2.47162789907313 '.'\n -2.47162789907313 -2.47162789907313 -2.47162789907313 '.'\n -2.47162789907313 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' -0.791505674827999 '.' '.' '.' '.' '.' '.' '.' '.'\n -2.47162789907313 '.' '.' -2.47162789907313 -2.47162789907313\n -2.47162789907313 -2.47162789907313 -2.47162789907313 '.' '.'\n -2.47162789907313 '.' '.' '.' '.' '.' -2.47162789907313 -2.47162789907313\n '.' -2.47162789907313 -2.47162789907313 '.' -2.47162789907313\n -2.47162789907313 '.' -2.47162789907313 '.' '.' -2.47162789907313 '.'\n -2.47162789907313 '.' -2.47162789907313 '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' -1.51976012533128 -1.61173791689534\n -1.599983320827 '.' '.' '.' '.' -1.03231231326932 -1.19910660480315\n -0.791505674827999 '.' -0.922844550293754 -0.946080819110286\n -1.19895133869269 '.' '.' -1.2805127161158 -1.04316708587741 '.' '.' '.'\n '.' 1.15014257139245 '.' '.' '.' -0.173049359454575 '.' '.'\n -1.79937886551949 '.' 0.862222958307612 '.' '.' 0.835574002005388 '.' '.'\n '.' 1.15014257139245 '.' '.' '.' -0.711187689176027 '.' '.' '.'\n -0.151628993663861 -0.151628993663861 '.' '.' '.' '.' 1.11611247300207\n '.' '.' '.' 0.400052517453145 -1.22454087327741 '.' '.' '.'\n -0.667367098831187 '.' '.' -0.732640703348332 '.' '.' -2.47162789907313\n '.' 0.50450224433182 '.' -0.0592308346427654 -0.753758448502777\n -0.281672783681246 -0.540807434627598 -0.614175007315312\n -1.40825779214199 0.0269779205648351 -0.582493556461374 '.' '.'\n -0.233252267365632 '.' '.' -0.398820302991302 '.' -0.894129278429717 '.'\n '.' '.' -0.660904930034766 '.' -0.98783763752124 -0.538573860699497\n -0.0279109913872425 '.' '.' 0.486612084123194 '.' '.' 0.555421231184509\n 0.298427608261686 0.0332648069020548 -0.186392860565083 '.'\n -0.590406277851698 '.' 0.0738937137831485 0.446297134803958\n 0.165045961017247 -0.557230884715189 0.160620922610348 0.297239579860913\n '.' '.' -1.46605851541056 '.' 0.455761090475751 '.' 0.923141277111761\n -2.47162789907313 '.' -1.03424805406881 '.' '.' '.' '.' 0.48201697995522\n '.' 0.0401032398207032 0.130333981724112 0.138678963648336\n 0.455109011286475 '.' '.' '.' '.' '.' 0.256065903692486 '.'\n -0.200045256499347 -0.063872653370671 '.' -0.333473000003108\n -1.26125942639438 -1.27538361497834 '.' 0.517389412359409\n 1.11611247300207 '.' '.' 0.420298457025828 0.476236130280707\n -0.514512683951566 0.49521306481059 '.' '.' '.' -0.478383965590741\n 0.447874019110796 '.' 0.0915777485634488 0.774883176364413 '.' '.'\n -0.145832700564166 -0.777477966060391 '.' 0.660060919341019 '.'\n -0.498050358907741 '.' '.' -1.98456571684452 '.' -0.246989921895573 '.'\n -0.471672769326771 -0.644700690991608 '.' -1.44715983267575\n -1.59282400997772 -1.94147419136763 -1.95519140378666 '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' 1.26063232799998 '.' '.' '.' 1.26063232799998 '.'\n 0.420940108293089 0.929744998199481 '.' '.' '.' 1.19108832249232 '.' '.'\n '.' '.' '.' '.' '.' -2.47162789907313 -2.47162789907313 '.' '.'\n 0.491444562429841 '.' '.' -0.895389454591556 0.395552906953086\n -0.0819162539430506 -0.751016280020485 -0.327638361779731 '.'\n -0.15204008716984 '.' -0.324619004824717 '.' '.' -0.327510119466819\n -0.688425296234703 -0.46244511082827 '.' '.' -1.04153334326364 '.'\n -0.396805714672051 -0.247951312124761 '.' -0.292110083865967\n -0.225638310792768 -0.401705936344982 0.491444562429841 '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' 0.586548999968454\n 0.36681079114905 '.' '.' 0.524682444320288 -2.47162789907313\n 0.586548999968454 -1.34878674017516 -1.34878674017516 '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.']' has dtype incompatible with float64, please explicitly cast to a compatible dtype first.\n  df.loc[:, df.columns != sample_col] = df.loc[:, df.columns != sample_col].fillna(\".\")\n/PROGS/EXTERN/AnnotSV/AnnotSV_dev/share/python3/variantconvert/src/variantconvert/converters/vcf_from_annotsv.py:59: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '['.' '.' 1.07662990621103 0.6684477327677 1.07662990621103\n 0.553342166544692 0.553342166544692 -2.98697085794417 -3.10473776124822\n -2.98697085794417 '.' '.' '.' '.' '.' '.' '.' 0.635599914039232\n 0.0819191978639822 0.635599914039232 1.02618176351368 1.02618176351368\n 1.02618176351368 1.02618176351368 '.' '.' 2.96959666946894\n -0.328810289068687 2.96959666946894 '.' 2.22375841006203 '.' '.'\n 0.630577750419089 '.' '.' '.' 2.22375841006203 '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' -0.271906921498889 '.' '.' '.' '.' '.' '.' '.' '.'\n 2.22375841006203 '.' 0.630577750419089 '.' '.' '.' 2.22375841006203 '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' -0.271906921498889 '.'\n -0.922111894578121 -0.922111894578121 1.56757328357025 '.' '.'\n 1.56757328357025 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n 3.6772325764896 0.16322796385632 1.67462394349301 3.6772325764896 '.' '.'\n '.' '.' -0.424806725478425 '.' 0.241972873531725 -0.193191475026352\n 0.433099426603836 '.' 0.622094281610252 2.42746656950142 2.42746656950142\n '.' 1.02068766819866 '.' '.' '.' 1.8673923772413 -0.71959827485963\n -0.71959827485963 '.' '.' '.' '.' '.' '.' 2.94244265911253\n -0.678746019468492 0.360135634788785 '.' '.' '.' -0.375038933750903 '.'\n '.' -0.184731887964386 1.18735715980007 '.' 0.459211010381399\n -0.597972033048653 -0.543665561522748 0.0822917398873284\n 0.128056348383697 '.' '.' 0.554183575869215 2.94244265911253 '.' '.' '.'\n -0.002241469611443 2.36782594176173 -0.373621593221624 '.'\n 0.348188483468328 0.465852147917107 '.' 0.425870777992255\n 1.46130508236304 '.' 0.690563071344625 '.' '.' -1.98609532754524 '.'\n -1.04492215962902 '.' -0.408428770523539 '.' '.' '.' -0.800223805913347\n '.' 0.698499439551705 '.' '.' '.' '.' '.' '.' '.' '.' '.'\n 2.28676628831896 '.' -0.0046056816669864 0.672972182845271 '.' '.'\n 1.20573288011437 -0.289055396385536 1.58078637399342 0.477351976371369\n '.' 0.687283106386744 0.246895000414255 -1.50983365445593 '.' '.'\n -0.990180484365383 -0.387275128092876 '.' '.' '.' '.' 0.85336181383742\n '.' -0.433167561551584 '.' -0.0258588646723899 '.' '.' -0.696357556154856\n '.' 0.85336181383742 '.' '.' -0.764855351937167 '.' '.' '.'\n 0.337534415605819 '.' '.' '.' -0.797615479905467 '.' '.' '.'\n -0.139439307213778 -0.139439307213778 '.' '.' '.' '.' 3.21047317301589\n -2.08573739588537 '.' '.' -1.34614550091757 0.724425471954094 '.' '.'\n -1.7693057852588 1.49327706340249 '.' '.' -0.18186725937295 '.' '.'\n -0.841325117744977 '.' -1.15521787576548 '.' -0.123982055433658\n -1.09712093422474 -0.335178666431938 -0.885541042446365\n -0.960716353370505 -0.0473365386141676 -1.06125182633592 0.70441463212366\n '.' '.' 0.982292085246316 '.' '.' -0.219318263143712 '.'\n -0.194585519191658 -1.108132588085 2.60422559153241 -0.576730190868019\n -0.443208130978936 1.8774465029651 -1.00228696058413 -2.22163439002498\n -1.46983950545222 '.' '.' -0.704500724266535 '.' '.' -0.17378562567541\n 0.0230368692484615 -0.527208917402428 -0.362920265024982 '.'\n -0.457051628812482 '.' 0.142993789011855 -0.738211104213101\n 0.837642525932054 -0.774788091773142 1.55687904782076 -3.22135273058939\n '.' -0.287444310372334 -0.226834639209249 '.' -0.292338464564844\n 0.0606051954062481 -0.25533666429365 -2.1421417021426 -2.68253992069213\n -0.233147203181143 '.' '.' 3.21047317301589 '.' 0.532976598896309\n 0.701580942281967 0.075048187998812 -0.597063638061633 0.898629456776545\n -0.165997903989801 '.' '.' '.' '.' '.' 1.56448356794936 '.'\n 0.45277691276168 -2.65953872619111 '.' -1.44193705805358\n -0.471176482163648 0.0326224850029478 '.' -2.62911053265251\n 0.172471674763915 '.' '.' '.' -0.54023780146542 0.311204487601666\n 0.837271434822507 '.' '.' '.' 0.251281715605183 1.72296511806951\n 2.75338717063303 -1.04317795810088 -0.521938260031064 '.' '.'\n 0.664832774210228 0.934834224809331 '.' -1.05139548669208 '.'\n -1.4518704411588 '.' '.' -1.13990389227529 '.' -1.59029981969928 '.'\n -2.08522134689875 0.667359866413857 '.' -0.0042423849773584\n -0.488109075837714 -0.663631774481401 -2.6391793475309 '.'\n 1.46868520416757 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' 0.741987855668132 0.741987855668132\n 0.535222227518795 0.535222227518795 1.13380694792028 '.' '.' '.'\n -1.0886019180172 '.' 1.13380694792028 0.494543657071353\n 0.0616099264393714 '.' '.' 0.196967347879621 '.' -1.35330421932959\n -1.35330421932959 '.' '.' '.' '.' -0.989035894351638 -0.989035894351638\n '.' '.' 2.70903614483931 0.317380023327075 1.49986407027643 '.'\n -0.902054979760057 -0.44503506022657 0.200201742907301 0.58127606528246\n -0.0288746954043306 1.08623431117684 '.' 1.10438995088098 '.' '.'\n 1.09331776236833 2.70903614483931 -0.0167724140747313 '.' '.'\n -0.09395744769762 '.' -0.48782967368913 -0.250271670703448 '.'\n 0.385787155434006 -0.430513909559958 -0.746648021563001 0.977775575032158\n '.' 0.964550444182401 '.' 2.14121257165536 '.' '.' '.' '.'\n -1.59751875296103 '.' '.' 2.14121257165536 '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' 0.918523398770926\n 0.676417083229402 1.33624136747443 0.140072348156658 '.' 1.12959151611996\n 2.14121257165536 '.' '.' '.' '.' -1.59751875296103 '.' '.'\n 2.14121257165536 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' 0.918523398770926 0.676417083229402 1.33624136747443\n 0.140072348156658 '.' 1.12959151611996 2.2343517715388\n -0.0133102053832282 '.' '.' 2.2343517715388 -0.349819812502603\n -0.725400991144389 -0.190632175596259 -0.190632175596259\n 0.807946261414963 -1.20041549946446 -0.257046228208263 -0.112682658348456\n '.' 0.80408198011521 0.807946261414963 -1.65771922174252 '.' '.']' has dtype incompatible with float64, please explicitly cast to a compatible dtype first.\n  df.loc[:, df.columns != sample_col] = df.loc[:, df.columns != sample_col].fillna(\".\")\n/PROGS/EXTERN/AnnotSV/AnnotSV_dev/share/python3/variantconvert/src/variantconvert/converters/vcf_from_annotsv.py:59: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '['.' '.' 1.30887789301822 0.697024247535932 1.30887789301822\n -0.565086620797697 -0.565086620797697 -2.90416172871297 -3.32991530871711\n -2.90416172871297 '.' '.' '.' '.' '.' '.' '.' 1.04727080312339\n 0.0377121632347663 1.04727080312339 1.66555804568279 1.66555804568279\n 1.66555804568279 1.66555804568279 '.' '.' 4.05533207481267\n -0.503765753071617 4.05533207481267 '.' 2.58284576037233 '.' '.'\n 0.0606178603183018 '.' '.' '.' 2.58284576037233 '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' -0.565772314050669 '.' '.' '.' '.' '.' '.' '.' '.'\n 2.58284576037233 '.' 0.0606178603183018 '.' '.' '.' 2.58284576037233 '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' -0.565772314050669 '.'\n -1.23259677674915 -1.23259677674915 2.11426077975333 '.' '.'\n 2.11426077975333 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n 4.17517843763452 0.511864222455301 1.73432863871862 4.17517843763452 '.'\n '.' '.' '.' 1.07197498670855 '.' -0.405588628410555 0.152950560142403\n 0.962176598220999 '.' 0.322678575541803 2.41694262394586 2.41694262394586\n '.' 1.31010018701924 '.' '.' '.' 2.14567117504116 0.443929223699058\n 0.443929223699058 '.' '.' '.' '.' '.' '.' 5.29477062168781\n -0.22775445384527 0.772811927860626 '.' '.' '.' 0.817637812863819 '.' '.'\n 1.02819617031079 0.932740471460801 '.' 1.99698466418685 -1.19469008098196\n 3.98018572942351 -0.450618700229176 0.836381939603491 '.' '.'\n 1.2901097836858 3.34022892264706 '.' '.' '.' 0.855158778511627\n 3.38001100960461 0.590344002361273 '.' 0.327140414338646\n 0.557839148920189 '.' -0.701931719398633 0.279301120222081 '.'\n 4.03153091509844 '.' '.' -0.363927890852326 '.' 2.06932219421127 '.'\n 2.39258092860216 '.' '.' '.' 1.18081437151802 '.' 0.174075190759776 '.'\n '.' '.' '.' '.' '.' '.' '.' '.' 2.39892044394279 '.' 2.85964800561254\n 2.65389095774821 '.' '.' 5.29477062168781 -0.349034099945665\n -0.841707455415557 3.00980268645085 '.' 1.33036583543754\n 0.909128978651125 1.16392737773964 '.' '.' -0.63060581685217\n -1.12481109733158 '.' '.' '.' '.' 2.61388539526619 '.' -0.551647400212283\n '.' -1.1196806141136 '.' '.' 1.21996216564798 '.' 0.386394557252369 '.'\n '.' 1.81088903222596 '.' '.' '.' 2.61388539526619 '.' '.' '.'\n 0.510431064472241 '.' '.' '.' -0.254839803839483 -0.254839803839483 '.'\n '.' '.' '.' 5.41905620095129 -0.684191486481177 '.' '.' -3.06736199452323\n -0.520531332003985 '.' '.' -2.76319865584382 -0.0905757042419409 '.' '.'\n -0.360251650665831 '.' '.' -1.07172517579562 '.' 2.22110482517757 '.'\n 0.739036799993362 -0.06853474623291 -0.288196719712539 0.113301977907898\n -0.560975494729554 0.337473103766752 -0.304110728864919\n -0.142173437306223 '.' '.' 0.77606556285772 '.' '.' 4.00265992091985 '.'\n 3.59552380294204 -3.07621828146639 2.66896012411798 -0.56780381579822\n 0.50373477013136 0.292414150336672 -1.35276544118498 1.36559781959522\n 1.90036967420169 '.' '.' 2.35326609523799 '.' '.' 2.72200675038499\n -1.08931776314455 -2.11601983727089 1.29214097300775 '.'\n -0.248524904723244 '.' 1.01071894719792 1.24551033534962 1.18082169671465\n 0.0928341710725898 0.599493733703596 -2.0505953640051 '.'\n -1.08649031284551 -0.865456519909477 '.' 2.75557960790302\n 0.881143579184346 0.674471945471649 -1.44878648893363 -3.72411383897722\n -1.38131789177637 '.' '.' 5.41905620095129 '.' -0.342636515952079\n -0.111669494459405 -0.816993645198656 0.18239534186363 -0.214997258794035\n 0.517811238015827 '.' '.' '.' '.' '.' 2.50372489686823 '.'\n 0.0974901129923348 -2.04902349969142 '.' -2.99791740003004\n -1.41925515956187 2.34696639804313 '.' -1.8079483903393 3.32151835531883\n '.' '.' '.' 4.10111380803453 -0.733522379663636 2.12628699887071 '.' '.'\n '.' -0.615839346409602 0.620681882628763 1.98938453238048\n 0.185259378880778 1.10884704568458 '.' '.' 4.02698047878354\n 0.303907421223287 '.' 0.853955018782722 '.' -1.9222533414192 '.' '.'\n -0.987321027475765 '.' -1.42113131036961 '.' -3.42040819381878\n 1.21754776737995 '.' -0.527819209746206 -1.79889045378054\n -1.44235869751468 -5.33339017829433 '.' 1.8176765127262 '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n 1.6951286981971 1.6951286981971 -0.0274451648003615 -0.0274451648003615\n 1.83366808117122 '.' '.' '.' 0.322004765294048 '.' 0.9911283716698\n -0.512733755306802 -0.398837217747125 '.' '.' 1.83366808117122 '.'\n -0.982727799381157 -0.982727799381157 '.' '.' '.' '.' -1.15018109964609\n -1.15018109964609 '.' '.' 4.23220859072885 0.681275321847818\n 1.4396607305099 '.' 4.05717005254254 1.74981493260157 0.554223709974506\n 1.2288879277127 0.953055172354045 1.71697083676563 '.' 3.33806479625907\n '.' '.' 0.473373375061211 1.92914089110849 0.933080799622852 '.' '.'\n -0.0129976080826519 '.' 2.85746490313868 3.27930650064444 '.'\n -0.303087706786894 1.53581142075512 2.45305749434808 2.53365459317235 '.'\n 4.23220859072885 '.' 2.19863945242443 '.' '.' '.' '.' -3.97736276921453\n '.' '.' 1.8677219993927 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' 0.008093353918723 1.6332400949348\n 2.19863945242443 0.903069021299127 '.' 0.758429673080804 2.19863945242443\n '.' '.' '.' '.' -3.97736276921453 '.' '.' 1.8677219993927 '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' 0.008093353918723\n 1.6332400949348 2.19863945242443 0.903069021299127 '.' 0.758429673080804\n 2.48184869967673 2.09183372030708 '.' '.' 2.48184869967673\n 1.96019845356841 -0.857804306808559 1.58912949219012 1.58912949219012\n 9.03470791370173 5.44441583895939 4.55717824142058 6.67845368195785 '.'\n 0.293719819544616 2.17074250392365 9.03470791370173 '.' '.']' has dtype incompatible with float64, please explicitly cast to a compatible dtype first.\n  df.loc[:, df.columns != sample_col] = df.loc[:, df.columns != sample_col].fillna(\".\")\n/PROGS/EXTERN/AnnotSV/AnnotSV_dev/share/python3/variantconvert/src/variantconvert/converters/vcf_from_annotsv.py:59: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '['.' 101954269.0 '.' 10878.0 3078.0 '.' 127069.0 '.' 9721.0 5540.0\n 643650.0 728643.0 728113.0 100132929.0 653259.0 439965.0 100996567.0 '.'\n 582.0 254359.0 '.' 283417.0 '.' 283417.0 '.' 105370401.0 '.' 399671.0\n 641371.0 '.' '.' 646096.0 283755.0 727832.0 729786.0 606.0 100422949.0\n 100287399.0 100847060.0 348120.0 654499.0 '.' 646243.0 100996331.0\n 440225.0 727924.0 101927079.0 390538.0 283694.0 390539.0 388077.0\n 646370.0 100302233.0 646396.0 100616223.0 100132979.0 283767.0 '.'\n 283755.0 727832.0 729786.0 606.0 100422949.0 100287399.0 100847060.0\n 348120.0 654499.0 '.' 646243.0 100996331.0 440225.0 727924.0 101927079.0\n 390538.0 283694.0 '.' '.' 9742.0 '.' '.' 100289574.0 729264.0 '.' '.'\n 24150.0 386757.0 653550.0 '.' 729355.0 '.' '.' 113218496.0 102724928.0\n 606551.0 '.' '.' 283914.0 '.' '.' 24150.0 386757.0 653550.0 '.' 729355.0\n '.' '.' '.' 113218496.0 102724928.0 '.' 283914.0 '.' 1352.0 146822.0\n 9953.0 '.' 94150.0 '.' 94151.0 5376.0 100616125.0 64518.0 284040.0\n 100533496.0 94145.0 201158.0 '.' 414059.0 414062.0 9560.0 101060389.0\n 6349.0 729877.0 84218.0 '.' 284058.0 644246.0 '.' 101927289.0 101927289.0\n '.' 105373979.0 '.' 8214.0 5625.0 '.' 26220.0 117134596.0 9993.0 25786.0\n 8220.0 23617.0 2928.0 100652736.0 6576.0 8218.0 7290.0 64976.0 128977.0\n 105372860.0 7353.0 8318.0 7122.0 150185.0 5413.0 '.' 2812.0 6899.0\n 54584.0 79680.0 10587.0 1312.0 100616414.0 421.0 128989.0 406961.0\n 54487.0 100500860.0 100302197.0 27037.0 102465490.0 5902.0 109617010.0\n 29801.0 388849.0 284865.0 150197.0 65078.0 100302118.0 85359.0 653203.0\n '.' 728226.0 728229.0 728233.0 85376.0 117134597.0 729461.0 101927859.0\n 7625.0 91179.0 84861.0 51586.0 '.' 84222.0 5297.0 3053.0 9342.0 1399.0\n 101928891.0 150209.0 8216.0 80764.0 439931.0 113691.0 9127.0 6545.0\n 693234.0 440799.0 400891.0 400892.0 '.' 285401.0 132204.0 '.' 132203.0\n 100130345.0 132200.0 80145.0 '.' 6314.0 100861563.0 100507062.0 9861.0\n '.' 100652759.0 100287879.0 166336.0 '.' '.' 101929316.0 56999.0\n 101929335.0 100507098.0 102724763.0 '.' 84100.0 '.' 440993.0 693155.0\n 200958.0 '.' 152687.0 255403.0 642280.0 654254.0 7700.0 693156.0 79963.0\n 170960.0 54872.0 112441426.0 '.' 5158.0 101928521.0 521.0 4636.0 84179.0\n 10336.0 100129917.0 10815.0 2580.0 84286.0 1609.0 10861.0 3425.0 53834.0\n 285498.0 '.' '.' 10417.0 '.' 285463.0 1487.0 92070.0 10296.0 57654.0\n 54729.0 152877.0 7884.0 92305.0 10460.0 2261.0 3954.0 7468.0 677770.0\n 7469.0 100126332.0 401115.0 339983.0 353497.0 79441.0 10608.0 100616358.0\n 57732.0 402160.0 6047.0 8603.0 79155.0 6452.0 118.0 10227.0 317648.0\n 8602.0 2868.0 100750326.0 3064.0 345222.0 6002.0 3083.0 285489.0 4043.0\n 285492.0 100133461.0 152.0 348926.0 133060.0 85013.0 55646.0 166793.0\n 27065.0 53407.0 '.' 100507266.0 109623454.0 '.' '.' 4487.0 '.' 54360.0\n 55351.0 10141.0 132884.0 2121.0 1400.0 100616201.0 389197.0 152789.0 '.'\n 285484.0 7466.0 5522.0 23324.0 93621.0 105374366.0 93622.0 339988.0\n 6286.0 114932.0 55330.0 9778.0 57533.0 '.' 257236.0 93624.0 80273.0\n 730971.0 57537.0 100616471.0 768239.0 100422826.0 84740.0 60312.0 '.'\n 84448.0 407052.0 54436.0 94031.0 105374374.0 8310.0 152992.0 27201.0\n 8532.0 '.' 3166.0 100287045.0 100287144.0 100287178.0 100287205.0\n 100287238.0 100288520.0 100287327.0 100287364.0 100287404.0 100287441.0\n 100287478.0 100287513.0 728369.0 728373.0 728379.0 728386.0 728393.0\n 728400.0 728405.0 391627.0 728419.0 391622.0 '.' 7367.0 '.' 653082.0 '.'\n '.' 100500825.0 101929495.0 1070.0 '.' 153364.0 10622.0 116068.0 84059.0\n 100505994.0 57561.0 100129716.0 '.' 56940.0 '.' 3136.0 80868.0 '.' '.'\n 27241.0 '.' '.' '.' 135892.0 8468.0 8326.0 9031.0 9275.0 26608.0 51085.0\n 155382.0 84277.0 114049.0 6804.0 100422948.0 171022.0 83451.0 1365.0\n 1364.0 155368.0 135886.0 2006.0 107986809.0 3984.0 7458.0 693175.0 7462.0\n 5982.0 7461.0 9569.0 113218504.0 2969.0 101926943.0 '.' 100128890.0\n 641517.0 401447.0 645402.0 100131980.0 100289462.0 55894.0 10407.0\n 503618.0 503841.0 504180.0 503614.0 100131608.0 441317.0 645558.0\n 645572.0 645651.0 441326.0 441323.0 441324.0 728746.0 728753.0 441327.0\n 441328.0 100133251.0 245910.0 245908.0 245909.0 140596.0 653423.0\n 414325.0 1673.0 '.' 100128890.0 641517.0 401447.0 645402.0 100131980.0\n 100289462.0 55894.0 10407.0 503618.0 503841.0 504180.0 503614.0\n 100131608.0 441317.0 645558.0 645572.0 645651.0 441326.0 441323.0\n 441324.0 728746.0 728753.0 441327.0 441328.0 100133251.0 245910.0\n 245908.0 245909.0 140596.0 653423.0 414325.0 1673.0 '.' 6224.0 26795.0\n 105375847.0 4342.0 5324.0 79145.0 '.' 83696.0 '.' 8242.0 23096.0 8243.0\n 102465516.0 158787.0 3028.0 10075.0 407054.0 406889.0]' has dtype incompatible with float64, please explicitly cast to a compatible dtype first.\n  df.loc[:, df.columns != sample_col] = df.loc[:, df.columns != sample_col].fillna(\".\")\n/PROGS/EXTERN/AnnotSV/AnnotSV_dev/share/python3/variantconvert/src/variantconvert/converters/vcf_from_annotsv.py:59: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '['.' '.' 8.0 8.0 8.0 9.0 9.0 8.0 8.0 8.0 '.' '.' 9.0 '.' '.' '.' '.' 5.0\n 5.0 7.0 4.0 4.0 4.0 4.0 '.' '.' 6.0 6.0 8.0 '.' 8.0 '.' '.' 8.0 '.' '.'\n '.' 8.0 '.' '.' '.' '.' '.' 9.0 '.' '.' '.' 9.0 9.0 '.' '.' '.' '.' '.'\n '.' '.' 8.0 8.0 '.' 8.0 '.' '.' '.' 8.0 '.' '.' '.' '.' '.' 9.0 '.' '.'\n '.' 9.0 9.0 '.' 4.0 4.0 9.0 '.' '.' 9.0 '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' 1.0 3.0 9.0 4.0 '.' '.' '.' '.' 1.0 '.' 7.0 9.0 7.0 '.' 7.0\n 7.0 7.0 9.0 9.0 '.' 9.0 '.' 9.0 0.0 0.0 '.' '.' '.' '.' '.' '.' 0.0 9.0\n 6.0 '.' '.' '.' 4.0 '.' '.' 6.0 9.0 '.' 3.0 5.0 0.0 4.0 9.0 '.' '.' 3.0\n 1.0 '.' '.' '.' 7.0 2.0 5.0 '.' 5.0 8.0 '.' 4.0 4.0 '.' 0.0 '.' '.' 5.0\n '.' 2.0 '.' 1.0 '.' '.' '.' 1.0 '.' 7.0 7.0 '.' '.' '.' '.' 7.0 '.' '.'\n '.' 4.0 0.0 2.0 0.0 '.' '.' 2.0 8.0 4.0 3.0 '.' 5.0 9.0 4.0 '.' '.' 6.0\n 6.0 '.' '.' '.' '.' 0.0 '.' 4.0 '.' 9.0 '.' 7.0 4.0 '.' 1.0 '.' '.' 0.0\n '.' '.' '.' 1.0 '.' '.' '.' 1.0 '.' '.' '.' 5.0 5.0 6.0 '.' '.' 6.0 0.0\n 6.0 '.' '.' 7.0 7.0 '.' '.' 9.0 5.0 '.' '.' 6.0 '.' '.' 9.0 '.' 1.0 '.'\n 2.0 1.0 6.0 3.0 8.0 6.0 3.0 4.0 '.' '.' 9.0 '.' '.' 1.0 '.' 2.0 7.0 3.0\n 6.0 4.0 8.0 3.0 3.0 3.0 '.' '.' 2.0 '.' '.' 2.0 7.0 6.0 2.0 '.' 2.0 '.'\n 2.0 0.0 3.0 6.0 1.0 7.0 '.' 2.0 6.0 '.' 0.0 2.0 3.0 4.0 5.0 6.0 8.0 '.'\n 3.0 '.' 9.0 8.0 5.0 4.0 7.0 5.0 '.' '.' '.' '.' '.' 5.0 '.' 9.0 5.0 '.'\n 5.0 5.0 1.0 '.' 7.0 0.0 '.' '.' 9.0 1.0 5.0 6.0 '.' '.' '.' 9.0 8.0 9.0\n 0.0 2.0 '.' '.' 2.0 4.0 '.' 2.0 '.' '.' '.' '.' 3.0 '.' 2.0 '.' 7.0 6.0\n '.' 5.0 7.0 9.0 9.0 '.' 3.0 9.0 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' 5.0 5.0 8.0 8.0 1.0 '.' '.'\n '.' 7.0 '.' 7.0 8.0 3.0 '.' '.' 1.0 '.' 5.0 5.0 '.' '.' '.' '.' 4.0 4.0\n '.' '.' 0.0 7.0 5.0 4.0 0.0 3.0 4.0 2.0 1.0 7.0 '.' 1.0 '.' '.' 5.0 4.0\n 9.0 '.' '.' 4.0 '.' 0.0 2.0 '.' 4.0 5.0 0.0 1.0 '.' 1.0 '.' 8.0 '.' '.'\n '.' '.' 9.0 9.0 '.' 9.0 9.0 9.0 9.0 '.' 8.0 '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' 9.0 8.0 9.0 9.0 9.0 '.' 9.0 8.0 '.' '.' '.' '.' 9.0\n 9.0 '.' 9.0 9.0 9.0 9.0 '.' 8.0 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' 9.0 8.0 9.0 9.0 9.0 '.' 9.0 0.0 5.0 '.' '.' 3.0 0.0 6.0 3.0 3.0\n 0.0 0.0 0.0 0.0 '.' 1.0 1.0 0.0 '.' '.']' has dtype incompatible with float64, please explicitly cast to a compatible dtype first.\n  df.loc[:, df.columns != sample_col] = df.loc[:, df.columns != sample_col].fillna(\".\")\n/PROGS/EXTERN/AnnotSV/AnnotSV_dev/share/python3/variantconvert/src/variantconvert/converters/vcf_from_annotsv.py:59: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '['.' '.' 2.6297e-08 1.72e-11 2.6297e-08 0.00065559 0.00065559 0.33439\n 3.8557e-06 8.2144e-07 '.' '.' 0.33439 '.' '.' '.' '.' 0.0004208\n 3.4063e-12 0.0004208 1.0936e-13 1.0936e-13 1.0936e-13 1.0936e-13 '.' '.'\n 6.4141e-05 1.3711e-29 6.4141e-05 '.' 0.35277 '.' '.'\n 2.2875000000000003e-19 '.' '.' '.' 0.042457 '.' '.' '.' '.' '.' 0.35277\n '.' '.' '.' 3.9447e-08 5.1332e-05 '.' '.' '.' '.' '.' '.' '.' 2.3586e-12\n 0.35277 '.' 2.2875000000000003e-19 '.' '.' '.' 0.042457 '.' '.' '.' '.'\n '.' 0.35277 '.' '.' '.' 3.9447e-08 5.1332e-05 '.' 9.914e-24 9.914e-24\n 0.0075995 '.' '.' 0.0075995 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n 0.90958 0.08405 1.282e-06 0.29349 '.' '.' '.' '.' 0.90958 '.' 1.9845e-17\n 0.095789 8.7378e-07 '.' 2.3189e-05 0.31517 0.21949 0.31517 0.088586 '.'\n 0.12057 '.' 1.3666e-05 0.99972 0.99972 '.' '.' '.' '.' '.' '.' 1.0\n 9.8176e-12 5.3577e-12 '.' '.' '.' 5.1573e-06 '.' '.' 0.003861 0.0044347\n '.' 0.058829 2.5101e-37 1.0 0.052924 1.9976e-05 '.' '.' 4.6237e-05\n 0.89512 '.' '.' '.' 0.51249 0.83661 4.7419e-05 '.' 3.4688e-11 1.1377e-06\n '.' 5.0422e-11 0.00014769 '.' 0.99973 '.' '.' 1.0841e-08 '.' 0.82235 '.'\n 0.85288 '.' '.' '.' 0.95882 '.' 5.0636e-05 0.48065 '.' '.' '.' '.'\n 9.0005e-09 '.' '.' '.' 1.5586e-06 0.9998 0.42419 0.99974 '.' '.'\n 3.1234e-12 2.5137e-10 0.013567 0.44604 '.' 1.9474e-14\n 1.0210999999999999e-92 0.013291 '.' '.' 4.468e-09 2.8317e-07 '.' '.' '.'\n '.' 0.99544 '.' 0.0041913 '.' 0.00010257 '.' 4.0628e-08 0.0060818 '.'\n 0.9595 '.' '.' 0.99518 '.' '.' '.' 0.99544 '.' '.' '.' 1.0004e-06 '.' '.'\n '.' 0.01013 0.01013 0.0047211 '.' '.' 0.0047211 1.0 0.3055 '.' '.'\n 0.098159 0.10393 '.' '.' 0.094789 5.4258e-15 '.' '.' 2.6155e-27 '.' '.'\n 8.4023e-14 '.' 0.95326 '.' 0.82499 0.0051818 3.0549e-09 1.7603e-09\n 1.0564e-11 3.7599e-13 0.011908 0.0015645 '.' '.' 2.6609e-15 '.' '.'\n 0.98442 '.' 0.22741 5.4127e-25 0.71465 0.0035705 0.068148 2.3074e-11\n 2.7082e-07 1.6432e-05 1.2141e-06 '.' '.' 0.13469 '.' '.' 0.86458\n 9.488e-41 1.2992e-09 0.77635 '.' 0.07234 '.' 0.79973 0.99993 0.0015926\n 1.156e-11 0.9883 7.3331e-11 '.' 2.1363e-06 1.6286e-15 '.' 1.0 0.80456\n 4.0922e-09 1.9843e-08 0.00010263 4.4951e-07 0.45772 '.' 0.50159 '.'\n 4.8437e-24 0.00019994 3.758e-07 1.3752e-08 0.0088286 2.4881e-07 '.' '.'\n '.' '.' '.' 0.16517 '.' 1.0733e-05 4.9116e-08 '.' 1.0207e-34\n 3.4620000000000003e-25 0.99173 '.' 7.736100000000001e-19 0.99986 '.' '.'\n 1.6230999999999999e-38 0.89954 6.557e-23 0.31404 '.' '.' '.' 0.033257\n 0.0025481 0.10151 0.99999 0.039267 '.' '.' 0.72366 0.13916 '.' 0.0031696\n '.' '.' '.' '.' 2.3828e-07 '.' 0.0045858 '.' 6.0939e-35 6.5843e-08 '.'\n 7.6016e-16 2.0315e-22 2.6834e-06 8.8063e-36 '.' 0.72623 0.28656 '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' 9.6905e-08 9.6905e-08 3.6787e-13 3.6787e-13 0.98715 '.' '.' '.'\n 0.00010528 '.' 4.5418e-05 1.7611e-10 0.30382 '.' '.' 0.98715 '.'\n 0.0093421 0.0093421 '.' '.' '.' '.' 4.2117e-17 4.2117e-17 '.' '.' 1.0\n 1.5479e-10 1.3955e-06 0.0019309 1.0 0.18519 0.00018452 0.047771 0.91622\n 0.023092 '.' 0.9785 '.' '.' 0.0029581 0.52233 6.9789e-05 '.' '.'\n 2.1429e-14 '.' 0.99937 0.43982 '.' 0.00022295 2.2054e-06 0.99997 0.90039\n '.' 0.99592 '.' 0.4218 '.' '.' '.' '.' 1.6471e-08 0.067977 '.' 0.027751\n 0.33176 0.081151 0.29184 '.' 0.4218 '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' 0.32633 0.37719 0.0085821 0.093748 6.9645e-05 '.' 0.0011637\n 0.4218 '.' '.' '.' '.' 1.6471e-08 0.067977 '.' 0.027751 0.33176 0.081151\n 0.29184 '.' 0.4218 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n 0.32633 0.37719 0.0085821 0.093748 6.9645e-05 '.' 0.0011637 0.99532\n 0.020686 '.' '.' 0.58928 0.99532 0.034885 2.2898e-14 2.2898e-14 1.0 1.0\n 0.99998 1.0 '.' 0.983 0.93604 1.0 '.' '.']' has dtype incompatible with float64, please explicitly cast to a compatible dtype first.\n  df.loc[:, df.columns != sample_col] = df.loc[:, df.columns != sample_col].fillna(\".\")\n/PROGS/EXTERN/AnnotSV/AnnotSV_dev/share/python3/variantconvert/src/variantconvert/converters/vcf_from_annotsv.py:59: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '['.' '.' 0.00090932 1.219e-05 0.00090932 0.00015575 0.00015575 0.00029629\n 0.00029629 6.116e-09 '.' '.' '.' '.' '.' '.' '.' 0.0061403 1.7787e-07\n 0.0061403 7.0294e-05 7.0294e-05 7.0294e-05 7.0294e-05 '.' '.' 0.035999\n 6.2323e-17 0.035999 '.' 0.57189 '.' '.' 0.086864 '.' '.' '.' 0.57189 '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' 0.018051 '.' '.' '.' '.' '.' '.' '.'\n '.' 0.57189 '.' 0.086864 '.' '.' '.' 0.57189 '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' 0.018051 '.' 9.1377e-18 9.1377e-18 0.64106 '.' '.' 0.64106\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' 0.83315 0.64657 0.0075064\n 0.085455 '.' '.' '.' '.' 0.83315 '.' 3.1995e-14 0.24429 0.0023623 '.'\n 0.00013674 0.63692 0.63692 '.' 0.48994 '.' '.' '.' 0.62038 0.99973\n 0.99973 '.' '.' '.' '.' '.' '.' 1.0 7.621e-07 4.7536e-06 '.' '.' '.'\n 0.0010959 '.' '.' 0.0041565 0.037186 '.' 0.63354 1.2408e-26 1.0 0.020082\n 3.69e-07 '.' '.' 0.069104 0.74052 '.' '.' '.' 0.10112 0.9834 0.0012635\n '.' 1.0692e-08 0.00084666 '.' 8.2184e-07 4.2224e-06 '.' 0.9999 '.' '.'\n 1.3059e-05 '.' 0.33622 '.' 0.98899 '.' '.' '.' 0.52644 '.' 0.12857 '.'\n '.' '.' '.' '.' '.' '.' '.' '.' 0.00035588 '.' 0.70261 0.96081 '.' '.'\n 0.00080407 2.7955e-05 0.15166 0.16345 '.' 1.9583e-10 3.3832e-52 0.029328\n '.' '.' 1.8785e-07 0.00010047 '.' '.' '.' '.' 0.98784 '.' 0.17171 '.'\n 0.0027379 '.' '.' 0.97832 '.' 0.92856 '.' '.' 0.96209 '.' '.' '.' 0.98784\n '.' '.' '.' 4.2266e-07 '.' '.' '.' 0.0042709 0.0042709 '.' '.' '.' '.'\n 1.0 1.7753e-05 '.' '.' 1.3118e-09 0.16189 '.' '.' 5.9729e-11 8.7751e-07\n '.' '.' 1.6257e-13 '.' '.' 4.4299e-08 '.' 0.9434 '.' 0.79579 0.97313\n 0.00043963 0.001194 4.013e-06 2.6418e-08 0.58219 0.12523 '.' '.'\n 1.0881e-06 '.' '.' 0.97976 '.' 0.84486 8.8875e-14 0.18842 3.007e-05\n 0.51566 1.5746e-06 0.091952 0.0029091 0.081055 '.' '.' 0.16689 '.' '.'\n 0.32468 2.9965999999999997e-32 8.8992e-07 0.89694 '.' 0.88846 '.' 0.62895\n 0.99782 2.9733e-06 0.0031019 0.6113 3.0178e-07 '.' 0.017449 5.6904e-07\n '.' 1.0 0.32217 0.00056037 5.2082e-07 0.0048084 0.0060843 '.' '.' 0.64595\n '.' 7.3147e-16 0.11006 0.00013245 0.0091642 0.0045383 1.1678e-06 '.' '.'\n '.' '.' '.' 0.27536 '.' 0.00065277 0.0043235 '.' 1.0532999999999999e-21\n 8.015e-08 0.95327 '.' 6.3423e-10 0.99317 '.' '.' '.' 0.56445 4.3573e-18\n 0.17706 '.' '.' '.' 0.048649 0.008908 0.15897 0.99472 0.909 '.' '.'\n 0.34506 0.89627 '.' 0.0026463 '.' 3.335e-11 '.' '.' 0.37607 '.' 0.76242\n '.' 1.082e-27 1.7199e-05 '.' 3.0316e-12 1.4776e-13 1.2826e-05\n 4.5079999999999994e-21 '.' 0.12528 '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' 0.010256 0.010256\n 0.043228 0.043228 0.97875 '.' '.' '.' 0.011321 '.' 0.0002801 6.4276e-05\n 0.77182 '.' '.' 0.97875 '.' 0.0043071 0.0043071 '.' '.' '.' '.'\n 6.3752e-10 6.3752e-10 '.' '.' 1.0 2.7256e-06 0.1306 '.' 1.0 0.70664\n 0.0043765 0.67682 0.65635 0.0047983 '.' 0.91048 '.' '.' 9.0329e-06\n 0.67854 0.00013716 '.' '.' 1.52e-05 '.' 0.9909 0.92254 '.' 0.00069106\n 4.0421e-05 0.99988 0.99643 '.' 0.99935 '.' 0.51947 '.' '.' '.' '.'\n 4.2486e-09 '.' '.' 0.047238 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' 0.43625 0.40931 0.51947 0.039012 '.' 0.39981\n 0.51947 '.' '.' '.' '.' 4.2486e-09 '.' '.' 0.047238 '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' 0.43625 0.40931\n 0.51947 0.039012 '.' 0.39981 0.82992 0.68632 '.' '.' 0.14931 0.82992\n 0.38798 5.7604e-06 5.7604e-06 1.0 0.99784 0.97539 0.99999 '.' 0.96626\n 0.88687 1.0 '.' '.']' has dtype incompatible with float64, please explicitly cast to a compatible dtype first.\n  df.loc[:, df.columns != sample_col] = df.loc[:, df.columns != sample_col].fillna(\".\")\n/PROGS/EXTERN/AnnotSV/AnnotSV_dev/share/python3/variantconvert/src/variantconvert/converters/vcf_from_annotsv.py:59: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '[-1.0 '.' 1.0 '.' '.' -1.0 '.' -1.0 '.' '.' '.' '.' '.' '.' '.' '.' '.'\n 0.9 '.' '.' 1.0 '.' 0.0 '.' -1.0 '.' -1.0 '.' '.' -1.6 -1.0 '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' -1.0 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' -1.0 1.0 '.' 0.0 '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' -1.0 '.' '.' '.' '.' '.' '.' '.' 0.0\n '.' '.' '.' -1.0 '.' 1.0 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' -1.0 '.' '.' '.' '.' '.' '.' '.' -1.0 '.' '.' -1.0 '.' '.' '.'\n '.' 1.9 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' 1.0 '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' 1.0 '.' -1.0 '.'\n '.' '.' 1.9 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' -1.0 '.' 0.0 '.'\n 1.0 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' -1.0 '.' 1.0 '.' '.'\n -1.6 0.9 '.' 0.0 '.' 1.45 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n -0.55 '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' -1.0 '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.'\n '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' 1.0 '.' '.' '.' '.' '.'\n '.' -1.0 '.' 1.0 '.' '.' '.' '.' '.' '.' '.' '.' '.']' has dtype incompatible with float64, please explicitly cast to a compatible dtype first.\n  df.loc[:, df.columns != sample_col] = df.loc[:, df.columns != sample_col].fillna(\".\")\n/PROGS/EXTERN/AnnotSV/AnnotSV_dev/share/python3/variantconvert/src/variantconvert/converters/vcf_from_annotsv.py:60: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '['NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA'\n 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA'\n 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA'\n 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA'\n 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA'\n 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA'\n 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA'\n 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA'\n 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA'\n 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA'\n 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA'\n 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA'\n 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA'\n 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA'\n 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA'\n 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA'\n 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA'\n 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA'\n 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA'\n 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA'\n 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA'\n 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA'\n 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA'\n 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA'\n 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA'\n 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA'\n 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA'\n 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA'\n 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA'\n 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA'\n 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA'\n 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA'\n 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA'\n 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA'\n 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA'\n 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA'\n 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA'\n 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA'\n 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA' 'NA'\n 'NA' 'NA' 'NA' 'NA']' has dtype incompatible with float64, please explicitly cast to a compatible dtype first.\n  df.loc[:, sample_col] = df.loc[:, sample_col].fillna(\"NA\")\n2026-04-14 12:03:36 [INFO] variantconvert finished.\n"
  },
  {
    "path": "share/doc/AnnotSV/Example/test1.annotated.vcf",
    "content": "##fileformat=VCFv4.2\n##fileDate=14/04/2026\n##inputFile=/PROGS/EXTERN/AnnotSV/AnnotSV_dev/share/doc/AnnotSV/Example/test1.annotated.tsv\n##source=variantconvert from AnnotSV\n##variantconvertVersion=2.0.1\n##variantconvertMode=combined\n##FILTER=<ID=PASS,Description=\"Passed filter\">\n##ALT=<ID=DUP,Description=\"Duplication\">\n##ALT=<ID=DEL,Description=\"Deletion\">\n##INFO=<ID=AnnotSV_ID,Number=1,Type=String,Description=\"AnnotSV ID\">\n##INFO=<ID=SV_chrom,Number=1,Type=String,Description=\"Name of the chromosome\">\n##INFO=<ID=SV_start,Number=1,Type=Integer,Description=\"Starting position of the SV in the chromosome\">\n##INFO=<ID=END,Number=1,Type=Integer,Description=\"Ending position of the SV in the chromosome\">\n##INFO=<ID=SVLEN,Number=1,Type=Integer,Description=\"Length of the SV (bp) (deletions have negative values)\">\n##INFO=<ID=SVTYPE,Number=1,Type=String,Description=\"Type of the SV (DEL, DUP, ...)\">\n##INFO=<ID=Samples_ID,Number=1,Type=String,Description=\"List of the samples ID for which the SV was called (according to the SV input file)\">\n##INFO=<ID=REF,Number=1,Type=String,Description=\"Nucleotide sequence in the reference genome (extracted only from a VCF input file)\">\n##INFO=<ID=ALT,Number=1,Type=String,Description=\"Alternate nucleotide sequence (extracted only from a VCF input file)\">\n##INFO=<ID='SampleID',Number=1,Type=String,Description=\"The sample ID column from a VCF file\">\n##INFO=<ID=Annotation_mode,Number=1,Type=String,Description=\"Indicate the type of annotation lines generated: annotation on the SV full length ('full'), annotation on each gene overlapped by the SV ('split')\">\n##INFO=<ID=Gene_name,Number=.,Type=String,Description=\"Gene symbol\">\n##INFO=<ID=Gene_count,Number=1,Type=Integer,Description=\"Number of overlapped genes with the SV\">\n##INFO=<ID=Tx,Number=1,Type=String,Description=\"Transcript symbol\">\n##INFO=<ID=Tx_start,Number=1,Type=Integer,Description=\"Starting position of the transcript\">\n##INFO=<ID=Tx_end,Number=1,Type=Integer,Description=\"Ending position of the transcript\">\n##INFO=<ID=Overlapped_tx_length,Number=1,Type=Integer,Description=\"Length of the transcript (bp) overlapping with the SV\">\n##INFO=<ID=Overlapped_CDS_length,Number=1,Type=Integer,Description=\"Length of the CoDing Sequence (CDS) (bp) overlapped with the SV\">\n##INFO=<ID=Overlapped_CDS_percent,Number=1,Type=Integer,Description=\"Percent of the CoDing Sequence (CDS) (bp) overlapped with the SV\">\n##INFO=<ID=Frameshift,Number=1,Type=String,Description=\"Indicates if the CDS length is not divisible by three (yes or no)\">\n##INFO=<ID=Exon_count,Number=1,Type=Integer,Description=\"Number of exons of the transcript\">\n##INFO=<ID=Location,Number=1,Type=String,Description=\"SV location in the gene's. Values: txStart, txEnd, exon'i', intron'i' e.g. txStart-exon3\">\n##INFO=<ID=Location2,Number=1,Type=String,Description=\"SV location in the gene's coding regions. Values: UTR (no CDS in the gene), 5'UTR (before the CDS start), 3'UTR (after the CDS end), CDS (between the CDS start and the CDS end, can be in an exon or an intron). e.g. 3'UTR-CDS\">\n##INFO=<ID=Dist_nearest_SS,Number=1,Type=Integer,Description=\"Absolute distance to nearest splice site after considering exonic and intronic SV breakpoints\">\n##INFO=<ID=Nearest_SS_type,Number=1,Type=String,Description=\"Nearest splice site type: 5' (donor) or 3' (acceptor)\">\n##INFO=<ID=Intersect_start,Number=1,Type=Integer,Description=\"Start position of the intersection between the SV and a transcript\">\n##INFO=<ID=Intersect_end,Number=1,Type=Integer,Description=\"End position of the intersection between the SV and a transcript\">\n##INFO=<ID=RE_gene,Number=1,Type=String,Description=\"Name of the genes regulated by a regulatory element overlapped with the SV to annotate. When available, the regulated gene name is detailed with associated haploinsufficiency (HI), triplosensitivity (TS), Exomiser (EX) scores, OMIM and candidate genes. (For the filtering output, see the -REselect1 and -REselect2 options)\">\n##INFO=<ID=B_gain_source,Number=1,Type=String,Description=\"Origin of the benign gain genomic regions completely overlapping the SV to annotate: gnomAD, ClinVar (CLN), ClinGen (TS40), DGV (dgv, nsv or esv), DDD, 1000 genomes (1000g), Ira M. Hall's lab (IMH), Children's Mercy Research Institute (CMRI)\">\n##INFO=<ID=B_gain_coord,Number=1,Type=String,Description=\"Coordinates of the benign gain genomic regions completely overlapping the SV to annotate\">\n##INFO=<ID=B_gain_AFmax,Number=1,Type=Float,Description=\"Maximum allele frequency of the reported benign gain genomic regions (if available)\">\n##INFO=<ID=B_loss_source,Number=1,Type=String,Description=\"Origin of the benign loss genomic regions completely overlapping the SV to annotate: gnomAD, ClinVar (CLN), ClinGen (HI40), DGV (dgv, nsv or esv), DDD, 1000 genomes (1000g), Ira M. Hall's lab (IMH), Children's Mercy Research Institute (CMRI)\">\n##INFO=<ID=B_loss_coord,Number=1,Type=String,Description=\"Coordinates of the benign loss genomic regions completely overlapping the SV to annotate\">\n##INFO=<ID=B_loss_AFmax,Number=1,Type=Float,Description=\"Maximum allele frequency of the reported benign loss genomic regions (if available)\">\n##INFO=<ID=B_ins_source,Number=1,Type=String,Description=\"Origin of the benign insertion genomic regions completely overlapping the SV to annotate: gnomAD, ClinVar (CLN), 1000 genomes (1000g), Ira M. Hall's lab (IMH), Children's Mercy Research Institute (CMRI)\">\n##INFO=<ID=B_ins_coord,Number=1,Type=String,Description=\"Coordinates of the benign insertion genomic regions completely overlapping the SV to annotate\">\n##INFO=<ID=B_ins_AFmax,Number=1,Type=Float,Description=\"Maximum allele frequency of the reported benign insertion genomic regions (if available)\">\n##INFO=<ID=B_inv_source,Number=1,Type=String,Description=\"Origin of the benign inversion genomic regions completely overlapping the SV to annotate: gnomAD, 1000 genomes (1000g), Ira M. Hall's lab (IMH), Children's Mercy Research Institute (CMRI)\">\n##INFO=<ID=B_inv_coord,Number=1,Type=String,Description=\"Coordinates of the benign inversion genomic regions completely overlapping the SV to annotate\">\n##INFO=<ID=B_inv_AFmax,Number=1,Type=Float,Description=\"Maximum allele frequency of the reported benign inversion genomic regions (if available)\">\n##INFO=<ID=P_gain_phen,Number=1,Type=String,Description=\"Phenotype of the pathogenic gain genomic regions completely overlapped with the SV to annotate\">\n##INFO=<ID=P_gain_hpo,Number=1,Type=String,Description=\"HPO terms describing the pathogenic gain genomic regions completely overlapped with the SV to annotate\">\n##INFO=<ID=P_gain_source,Number=1,Type=String,Description=\"Origin of the pathogenic gain genomic regions completely overlapped with the SV to annotate: dbVarNR (dbVar), ClinVar (CLN), ClinGen (TS3)\">\n##INFO=<ID=P_gain_coord,Number=1,Type=String,Description=\"Coordinates of the pathogenic gain genomic regions completely overlapped with the SV to annotate\">\n##INFO=<ID=P_loss_phen,Number=1,Type=String,Description=\"Phenotype of the pathogenic loss genomic regions completely overlapped with the SV to annotate\">\n##INFO=<ID=P_loss_hpo,Number=1,Type=String,Description=\"HPO terms describing the pathogenic loss genomic regions completely overlapped with the SV to annotate\">\n##INFO=<ID=P_loss_source,Number=1,Type=String,Description=\"Origin of the pathogenic loss genomic regions completely overlapped with the SV to annotate: dbVarNR (dbVar), ClinVar (CLN), ClinGen (HI3), morbid\">\n##INFO=<ID=P_loss_coord,Number=1,Type=String,Description=\"Coordinates of the pathogenic loss genomic regions completely overlapped with the SV to annotate\">\n##INFO=<ID=P_ins_phen,Number=1,Type=String,Description=\"Phenotype of the pathogenic insertion genomic regions completely overlapped with the SV to annotate\">\n##INFO=<ID=P_ins_hpo,Number=1,Type=String,Description=\"HPO terms describing the pathogenic insertion genomic regions completely overlapped with the SV to annotate\">\n##INFO=<ID=P_ins_source,Number=1,Type=String,Description=\"Origin of the pathogenic insertion genomic regions completely overlapped with the SV to annotate: dbVarNR (dbVar), ClinVar (CLN)\">\n##INFO=<ID=P_ins_coord,Number=1,Type=String,Description=\"Coordinates of the pathogenic insertion genomic regions completely overlapped with the SV to annotate\">\n##INFO=<ID=P_snvindel_nb,Number=1,Type=Integer,Description=\"Number of pathogenic snv/indel from public databases completely overlapped with the SV to annotate\">\n##INFO=<ID=P_snvindel_phen,Number=1,Type=String,Description=\"Phenotypes of pathogenic snv/indel from public databases completely overlapped with the SV to annotate\">\n##INFO=<ID=TAD_coordinate,Number=1,Type=String,Description=\"Coordinates of the TAD whose boundaries overlapped with the annotated SV (boundaries included in the coordinates)\">\n##INFO=<ID=ENCODE_experiment,Number=1,Type=String,Description=\"ENCODE experiments used to define the TAD\">\n##INFO=<ID=Cosmic_ID,Number=1,Type=String,Description=\"COSMIC identifier\">\n##INFO=<ID=Cosmic_mut_typ,Number=1,Type=String,Description=\"Defined as Gain or Loss\">\n##INFO=<ID=CytoBand,Number=1,Type=String,Description=\"Cytogenic band annotation\">\n##INFO=<ID=GC_content_left,Number=1,Type=Float,Description=\"GC content around the left SV breakpoint (+/- 100bp)\">\n##INFO=<ID=GC_content_right,Number=1,Type=Float,Description=\"GC content around the right SV breakpoint (+/- 100bp)\">\n##INFO=<ID=Repeat_coord_left,Number=1,Type=String,Description=\"Repeats coordinates around the left SV breakpoint (+/- 100bp)\">\n##INFO=<ID=Repeat_type_left,Number=1,Type=String,Description=\"Repeats type around the left SV breakpoint (+/- 100bp) e.g. AluSp, L2b, L1PA2, LTR12C, SVA_D, ...\">\n##INFO=<ID=Repeat_coord_right,Number=1,Type=String,Description=\"Repeats coordinates around the right SV breakpoint (+/- 100bp)\">\n##INFO=<ID=Repeat_type_right,Number=1,Type=String,Description=\"Repeats type around the right SV breakpoint (+/- 100bp) e.g. AluSp, L2b, L1PA2, LTR12C, SVA_D, ...\">\n##INFO=<ID=Gap_left,Number=1,Type=String,Description=\"Gap regions coordinates around the left SV breakpoint (+/- 100bp)\">\n##INFO=<ID=Gap_right,Number=1,Type=String,Description=\"Gap regions coordinates around the right SV breakpoint (+/-100bp)\">\n##INFO=<ID=SegDup_left,Number=1,Type=String,Description=\"Segmental Duplication regions coordinates around the left SV breakpoint (+/- 100bp)\">\n##INFO=<ID=SegDup_right,Number=1,Type=String,Description=\"Segmental Duplication regions coordinates around the right SV breakpoint (+/- 100bp)\">\n##INFO=<ID=ENCODE_blacklist_left,Number=1,Type=String,Description=\"ENCODE blacklist regions coordinates around the left SV breakpoint (+/- 100bp)\">\n##INFO=<ID=ENCODE_blacklist_characteristics_left,Number=1,Type=String,Description=\"ENCODE blacklist regions characteristics around the left SV breakpoint (+/- 100bp)\">\n##INFO=<ID=ENCODE_blacklist_right,Number=1,Type=String,Description=\"ENCODE blacklist regions coordinates around the right SV breakpoint (+/- 100bp)\">\n##INFO=<ID=ENCODE_blacklist_characteristics_right,Number=1,Type=String,Description=\"ENCODE blacklist regions characteristics around the right SV breakpoint (+/- 100bp)\">\n##INFO=<ID=ACMG,Number=1,Type=String,Description=\"ACMG genes\">\n##INFO=<ID=HI,Number=1,Type=Integer,Description=\"ClinGen Haploinsufficiency Score\">\n##INFO=<ID=TS,Number=1,Type=Float,Description=\"ClinGen Triplosensitivity Score\">\n##INFO=<ID=DDD_HI_percent,Number=1,Type=Float,Description=\"Haploinsufficiency ranks from DDD\">\n##INFO=<ID=GenCC_disease,Number=1,Type=String,Description=\"GenCC disease name: e.g. Nizon-Isidor syndrome\">\n##INFO=<ID=GenCC_moi,Number=1,Type=String,Description=\"GenCC mode of inheritance\">\n##INFO=<ID=GenCC_classification,Number=1,Type=String,Description=\"GenCC classification (Definitive, Strong, Moderate, Limited, Disputed, Animal Model Only, Refuted or No known disease relationship)\">\n##INFO=<ID=GenCC_pmid,Number=1,Type=String,Description=\"GenCC Pubmed Id\">\n##INFO=<ID=DDD_status,Number=1,Type=String,Description=\"DDD status: e.g. confirmed, probable\">\n##INFO=<ID=DDD_mode,Number=1,Type=String,Description=\"DDD allelic requirement: e.g. biallelic, hemizygous...\">\n##INFO=<ID=DDD_consequence,Number=1,Type=String,Description=\"DDD mutation consequence: e.g. 'loss of function', uncertain ...\">\n##INFO=<ID=DDD_disease,Number=1,Type=String,Description=\"DDD disease name: e.g. 'OCULOAURICULAR SYNDROME'\">\n##INFO=<ID=DDD_pmid,Number=1,Type=String,Description=\"DDD Pubmed Id\">\n##INFO=<ID=ExAC_synZ,Number=1,Type=Float,Description=\"Positive synZ_ExAC (Z score) from ExAC indicate gene intolerance to synonymous variation\">\n##INFO=<ID=ExAC_misZ,Number=1,Type=Float,Description=\"Positive misZ_ExAC (Z score) from ExAC indicate gene intolerance to missense variation\">\n##INFO=<ID=ExAC_delZ,Number=1,Type=Float,Description=\"Positive delZ_ExAC (Z score) from ExAC indicate gene intolerance to deletion\">\n##INFO=<ID=ExAC_dupZ,Number=1,Type=Float,Description=\"Positive dupZ_ExAC (Z score) from ExAC indicate gene intolerance to duplication\">\n##INFO=<ID=ExAC_cnvZ,Number=1,Type=Float,Description=\"Positive cnvZ_ExAC (Z score) from ExAC indicate gene intolerance to CNV\">\n##INFO=<ID=OMIM_ID,Number=1,Type=String,Description=\"OMIM unique six-digit identifier\">\n##INFO=<ID=OMIM_phenotype,Number=1,Type=String,Description=\"e.g. Charcot-Marie-Tooth disease\">\n##INFO=<ID=OMIM_inheritance,Number=1,Type=String,Description=\"e.g. AD (= 'Autosomal dominant'). Detailed in AnnotSV's FAQ.\">\n##INFO=<ID=OMIM_morbid,Number=1,Type=String,Description=\"Set to 'yes' if the SV overlaps an OMIM morbid gene\">\n##INFO=<ID=OMIM_morbid_candidate,Number=1,Type=String,Description=\"Set to 'yes' if the SV overlaps an OMIM morbid gene candidate\">\n##INFO=<ID=LOEUF_bin,Number=1,Type=Integer,Description=\"Minimal 'decile bin of LOEUF' for given transcripts of a gene (lower values indicate more constrained). Values = integer [0-9]\">\n##INFO=<ID=GnomAD_pLI,Number=1,Type=Float,Description=\"Score computed by gnomAD indicating the probability that a gene is intolerant to a loss of function variation (Nonsense, splice acceptor/donor variants due to SNV/indel)\">\n##INFO=<ID=ExAC_pLI,Number=1,Type=Float,Description=\"Score computed by ExAC indicating the probability that a gene is intolerant to a loss of function variation (Nonsense, splice acceptor/donor variants due to SNV/indel). ExAC considers pLI>=0.9 as an extremely LoF intolerant gene\">\n##INFO=<ID=Exomiser_gene_pheno_score,Number=1,Type=Float,Description=\"Exomiser score for how close each overlapped gene is to the phenotype\">\n##INFO=<ID=Human_pheno_evidence,Number=1,Type=String,Description=\"Phenotypic evidence from Human model\">\n##INFO=<ID=Mouse_pheno_evidence,Number=1,Type=String,Description=\"Phenotypic evidence from Mouse model\">\n##INFO=<ID=Fish_pheno_evidence,Number=1,Type=String,Description=\"Phenotypic evidence from Fish model\">\n##INFO=<ID=Compound_htz(sample),Number=1,Type=String,Description=\"List of heterozygous SNV/indel (reported with 'chrom_position') presents in the gene overlapped by the annotated SV\">\n##INFO=<ID=Count_hom(sample),Number=1,Type=Integer,Description=\"Number of homozygous SNV/indel (extracted from VCF input file) in the individual 'sample' which are present: 1) in the deletion SV ('full' annotation) and 2) between intersectStart and intersectEnd ('split' annotation)\">\n##INFO=<ID=Count_htz(sample),Number=1,Type=Integer,Description=\"Number of heterozygous SNV/indel (extracted from VCF input file) in the individual 'sample' which are present: 1) in the SV ('full' annotation) and 2) between intersectStart and intersectEnd ('split' annotation)\">\n##INFO=<ID=Count_htz/allHom(sample),Number=1,Type=Float,Description=\"Ratio for QC filtering: #htz(sample)/#allHom(sample)\">\n##INFO=<ID=Count_htz/total(cohort),Number=1,Type=Float,Description=\"Ratio for QC filtering: #htz(sample)/#total(cohort)\">\n##INFO=<ID=Count_total(cohort),Number=1,Type=Integer,Description=\"Total count of SNV/indel called from all the samples of the cohort and present in the interval of the deletion\">\n##INFO=<ID=AnnotSV_ranking_score,Number=1,Type=Float,Description=\"SV ranking score following the 2019 joint consensus recommendation of ACMG and ClinGen. Scoring: pathogenic >= 0.99, likely pathogenic [0.90;0.98], variant of uncertain significance [0.89;-0.89], likely benign [-0.90;-0.98], benign <= -0.99.\">\n##INFO=<ID=AnnotSV_ranking_criteria,Number=1,Type=String,Description=\"Decision criteria explaining the AnnotSV ranking score\">\n##INFO=<ID=ACMG_class,Number=1,Type=String,Description=\"SV ranking class into 1 of 5: class 1 (benign), class 2 (likely benign), class 3 (variant of unknown significance), class 4 (likely pathogenic), class 5 (pathogenic)\">\n##INFO=<ID=Biologist_annotation,Number=.,Type=String,Description=\"Imported from AnnotSV\">\n##INFO=<ID=Biologist_ranking,Number=.,Type=String,Description=\"Imported from AnnotSV\">\n##INFO=<ID=Closest_left,Number=.,Type=String,Description=\"Imported from AnnotSV\">\n##INFO=<ID=Closest_right,Number=.,Type=String,Description=\"Imported from AnnotSV\">\n##INFO=<ID=Tx_version,Number=.,Type=String,Description=\"Imported from AnnotSV\">\n##INFO=<ID=po_P_gain_phen,Number=.,Type=String,Description=\"Imported from AnnotSV\">\n##INFO=<ID=po_P_gain_hpo,Number=.,Type=String,Description=\"Imported from AnnotSV\">\n##INFO=<ID=po_P_gain_source,Number=.,Type=String,Description=\"Imported from AnnotSV\">\n##INFO=<ID=po_P_gain_coord,Number=.,Type=String,Description=\"Imported from AnnotSV\">\n##INFO=<ID=po_P_gain_percent,Number=.,Type=String,Description=\"Imported from AnnotSV\">\n##INFO=<ID=po_P_loss_phen,Number=.,Type=String,Description=\"Imported from AnnotSV\">\n##INFO=<ID=po_P_loss_hpo,Number=.,Type=String,Description=\"Imported from AnnotSV\">\n##INFO=<ID=po_P_loss_source,Number=.,Type=String,Description=\"Imported from AnnotSV\">\n##INFO=<ID=po_P_loss_coord,Number=.,Type=String,Description=\"Imported from AnnotSV\">\n##INFO=<ID=po_P_loss_percent,Number=.,Type=String,Description=\"Imported from AnnotSV\">\n##INFO=<ID=po_B_gain_allG_source,Number=.,Type=String,Description=\"Imported from AnnotSV\">\n##INFO=<ID=po_B_gain_allG_coord,Number=.,Type=String,Description=\"Imported from AnnotSV\">\n##INFO=<ID=po_B_gain_someG_source,Number=.,Type=String,Description=\"Imported from AnnotSV\">\n##INFO=<ID=po_B_gain_someG_coord,Number=.,Type=String,Description=\"Imported from AnnotSV\">\n##INFO=<ID=po_B_loss_allG_source,Number=.,Type=String,Description=\"Imported from AnnotSV\">\n##INFO=<ID=po_B_loss_allG_coord,Number=.,Type=String,Description=\"Imported from AnnotSV\">\n##INFO=<ID=po_B_loss_someG_source,Number=.,Type=String,Description=\"Imported from AnnotSV\">\n##INFO=<ID=po_B_loss_someG_coord,Number=.,Type=String,Description=\"Imported from AnnotSV\">\n##INFO=<ID=NCBI_gene_ID,Number=.,Type=String,Description=\"Imported from AnnotSV\">\n##INFO=<ID=HGNC_gene_ID,Number=.,Type=String,Description=\"Imported from AnnotSV\">\n##FORMAT=<ID=GT,Number=1,Type=String,Description=\"Genotype\">\n##FORMAT=<ID=RE,Number=1,Type=Integer,Description=\"Reads Expected: the number of expected reads 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ntent_right=0.44;Repeat_coord_right=1:149209192-149209220;Repeat_type_right=(GA)n;SegDup_left=1:149035966-149106186;SegDup_right=1:149191324-149214601|1:149200001-149214601;ENCODE_blacklist_left=1:147832001-149058800;ENCODE_blacklist_characteristics_left=High_Signal_Region;NCBI_gene_ID=.,101954269;HGNC_gene_ID=.,HGNC:48322;AnnotSV_ranking_score=-1;AnnotSV_ranking_criteria=1A_(cf_Gene_count,_RE_gene,_+0.00)|2F/4O_(cf_B_loss_source,_-1.00)|2B_(cf_po_P_loss_source,_HI,_OMIM_morbid,_+0.00|3A_(1_gene,_+0.00)|5F_(+0.00);ACMG_class=1,full=1;END=149209289;SVLEN=-167356\tGT\t1/.\n1\t196756232\t.\tA\t<DEL>\t.\tPASS\tAnnotSV_ID=1_196756232_196799302_DEL_1;SV_start=196756232;Biologist_ranking=Benign;Annotation_mode=full,split,split;CytoBand=q31.3;Gene_name=CFHR3|CFHR1,CFHR3,CFHR1;Closest_left=CFH;Closest_right=CFHR4;Gene_count=2;Tx=.,NM_021023,NM_002113;Tx_version=.,6,3;Tx_start=.,196743969,196788860;Tx_end=.,196764537,196801319;Overlapped_tx_length=.,8306,10442;Overlapped_CDS_length=.,563,607;Overlapped_CDS_percent=.,56,61;Frameshift=.,yes,yes;Exon_count=.,6,6;Location=.,intron3-txEnd,txStart-intron4;Location2=.,CDS-3'UTR,5'UTR-CDS;Dist_nearest_SS=.,1114,327;Nearest_SS_type=.,3',3';Intersect_start=.,196756231,196788860;Intersect_end=.,196764537,196799302;RE_gene=ASPM_(morbid/RE=EA_enhancer)|CFH_(morbid/RE=GH_promoter_enhancer);P_loss_source=dbVar:nssv15121100;P_loss_coord=1:196757279-196796716;po_P_gain_source=dbVar:nssv15156967|dbVar:nssv15156970|dbVar:nssv15149867|nssv15151118|dbVar:nssv15127572|dbVar:nssv18330594|dbVar:nssv15777262|dbVar:nssv15169967|dbVar:nssv15146388|dbVar:nssv15151024;po_P_gain_coord=1:47852-249228449|1:82155-249218992|1:849468-249224684|1:145764500-249233096|1:181453461-213107248|1:182388774-249111240|1:185644664-221698833|1:187113114-224487119|1:195483440-249213000;po_P_gain_percent=0.02|0.02|0.02|0.04|0.14|0.06|0.12|0.12|0.08;po_P_loss_source=dbVar:nssv15129680|dbVar:nssv16207750|dbVar:nssv15146573|dbVar:nssv15151287|dbVar:nssv17970297|dbVar:nssv17970308|dbVar:nssv15146667|dbVar:nssv18329566|dbVar:nssv18330283|dbVar:nssv15154062|dbVar:nssv15134156|dbVar:nssv18792867|dbVar:nssv15146075|dbVar:nssv15119768;po_P_loss_coord=1:146053395-249233096|1:177551194-199599056|1:179002041-199694025|1:179011315-199022759|1:179073387-200192265|1:179413480-201764737|1:189003615-199584994|1:189633886-199854163|1:193011754-199882947|1:195089819-197443021|1:195483440-197865624|1:196676029-196842326|1:196712877-196797546|1:196722207-196808505;po_P_loss_percent=0.04|0.20|0.21|0.22|0.20|0.19|0.41|0.42|0.63|1.83|1.81|25.90|48.80|49.91;B_gain_source=DDD:3693;B_gain_coord=1:196724161-196912840;B_gain_AFmax=0.1822;B_loss_source=1000g|DDD:3692|DDD:3693|DDD:3695|dbVar|dgv11e55|dgv6e203|dgv87e199|esv2421560|esv3588469|nsv514031|nsv517662,1000g|DDD:3692|DDD:3693|DDD:3695|DDD:3698|dbVar|dgv11e55|dgv6e203|dgv87e199|esv2421560|esv3588469|esv3588471|gnomAD-SV_v2.1_DEL_1_10680|nsv514031|nsv517662,1000g|DDD:3692|DDD:3693|DDD:3695|DDD:3706|DDD:3707|DDD:3712|dbVar|dgv11e55|dgv6e203|dgv87e199|esv2421560|esv3588469|esv3588478|nsv514031|nsv517662;B_loss_coord=1:196711068-196937536|1:196719268-196810043|1:196722346-196822692|1:196723048-196815791|1:196724161-196912840|1:196727851-196939719|chr1:196728877-196808865|1:196728878-196808865|1:196728878-196808865|1:196731149-196901753|1:196733402-196813850|1:196738898-196801697,1:196711068-196937536|1:196719268-196810043|1:196722346-196822692|1:196723048-196815791|1:196724161-196912840|1:196727851-196939719|chr1:196728877-196808865|1:196728878-196808865|1:196728878-196808865|chr1:196729000-196789200|1:196729000-196789200|1:196731149-196901753|1:196733402-196813850|chr1:196735895-196764940|1:196735896-196764940|1:196735896-196764940|1:196738624-196771280|1:196738898-196801697,1:196711068-196937536|1:196719268-196810043|1:196722346-196822692|1:196723048-196815791|1:196724161-196912840|1:196727851-196939719|chr1:196728877-196808865|1:196728878-196808865|1:196728878-196808865|1:196731149-196901753|1:196733402-196813850|1:196738898-196801697|1:196773003-196909196|1:196777327-196902217|chr1:196782355-196903873|1:196782356-196903873|1:196782356-196903873|1:196785120-196821192;B_loss_AFmax=0.4486;B_inv_source=IMH;B_inv_coord=1:17124869-234920285|1:108097960-232960701;B_inv_AFmax=0.3095;po_B_gain_someG_source=1:196748312-196757828_DDD:3701|;po_B_gain_someG_coord=1:196724161-196912840_DDD:3693|1:196792551-196801251_DDD:3714;po_B_loss_someG_source=1:196719268-196810043_DDD:3692|1:196723048-196815791_esv2421560|1:196727851-196939719_dgv6e203|1:196728878-196808865_1000g|chr1:196729000-196789200_dbVar|1:196731149-196901753_dgv11e55|chr1:196735895-196764940_dbVar|1:196735896-196764940_esv3588471|1:196738898-196801697_nsv514031|chr1:196761000-196783900_dbVar|1:196772366-196774588_1000g|1:196772602-196794300_DDD:3705|1:196777327-196902217_DDD:3707|1:196782000-196788000_gnomAD-SV_v2.1_DEL_1_10685|1:196782356-196903873_1000g|1:196785120-196821192_DDD:3712|1:196790200-196805500_gnomAD-SV_v2.1_DEL_1_10686|;po_B_loss_someG_coord=1:196711068-196937536_nsv517662|1:196722346-196822692_dgv87e199|1:196724161-196912840_DDD:3693|chr1:196728877-196808865_dbVar|1:196728878-196808865_esv3588469|1:196729000-196789200_gnomAD-SV_v2.1_DEL_1_10680|1:196733402-196813850_DDD:3695|1:196735896-196764940_1000g|1:196738624-196771280_DDD:3698|1:196748312-196757828_DDD:3701|chr1:196772365-196774588_dbVar|1:196772366-196774588_esv3588475|1:196773003-196909196_DDD:3706|chr1:196782000-196788000_dbVar|chr1:196782355-196903873_dbVar|1:196782356-196903873_esv3588478|chr1:196790200-196805500_dbVar|1:196798566-196802072_DDD:3720;GC_content_left=0.35;GC_content_right=0.285;Repeat_coord_right=1:196797933-196799242;Repeat_type_right=L1MDa;SegDup_left=1:196756102-196796319;SegDup_right=1:196796320-196825045;DDD_HI_percent=98.26,98.26,92.58;ExAC_synZ=1.07662990621103,0.6684477327677,1.07662990621103;ExAC_misZ=1.30887789301822,0.697024247535932,1.30887789301822;GenCC_disease=.,hemolytic_uremic_syndrome,_atypical,_susceptibility_to,_1,age_related_macular_degeneration_1|dense_deposit_disease|hemolytic_uremic_syndrome,_atypical,_susceptibility_to,_1;GenCC_moi=.,.,AD|AR;GenCC_classification=.,Limited,Limited|Supportive;GenCC_pmid=.,22626820,19745068|19861685|23728178[PMID]|23830046;NCBI_gene_ID=.,10878,3078;HGNC_gene_ID=.,HGNC:16980,HGNC:4888;OMIM_ID=605336|134371,605336,134371;OMIM_phenotype=.,(Hemolytic_uremic_syndrome,_atypical,_susceptibility_to),_235400_(3)_AD,AR|(Macular_degeneration,_age-related,_reduced_risk_of),_603075_(3)_AD,(Hemolytic_uremic_syndrome,_atypical,_susceptibility_to),_235400_(3)_AD,AR|(Macular_degeneration,_age-related,_reduced_risk_of),_603075_(3)_AD;OMIM_inheritance=.,AD|AD,AR,AD|AD,AR;OMIM_morbid_candidate=yes;LOEUF_bin=8;GnomAD_pLI=2.6297e-08,1.72e-11,2.6297e-08;ExAC_pLI=0.00090932,1.219e-05,0.00090932;AnnotSV_ranking_score=1;AnnotSV_ranking_criteria=1A_(cf_Gene_count,_RE_gene,_+0.00)|2A_(cf_P_loss_source,_+1.00)|3A_(2_genes,_+0.00)|5F_(+0.00);ACMG_class=5,full=5,full=5;END=196799302;SVLEN=-43071\tGT\t1/.\n1\t248738899\t.\tG\t<DEL>\t.\tPASS\tAnnotSV_ID=1_248738899_248785562_DEL_1;SV_start=248738899;Biologist_ranking=Benign;Annotation_mode=full,split;CytoBand=q44;Gene_name=OR2T10;Closest_left=OR2T34;Closest_right=OR2T11;Gene_count=1;Tx=.,NM_001004693;Tx_version=.,2;Tx_start=.,248753787;Tx_end=.,248761001;Overlapped_tx_length=.,7214;Overlapped_CDS_length=.,939;Overlapped_CDS_percent=.,97;Frameshift=.,no;Exon_count=.,2;Location=.,txStart-txEnd;Location2=.,5'UTR-3'UTR;Intersect_start=.,248753787;Intersect_end=.,248761001;po_P_gain_source=dbVar:nssv15156967|dbVar:nssv15156970|dbVar:nssv15149867|nssv15151118|dbVar:nssv15127572|dbVar:nssv15777262|dbVar:nssv15151024|dbVar:nssv18326443|dbVar:nssv16207620|dbVar:nssv15146793|dbVar:nssv15147003|dbVar:nssv15146656|dbVar:nssv16215284|dbVar:nssv15145669|dbVar:nssv15154064|dbVar:nssv15146178|dbVar:nssv18329268|dbVar:nssv15147314|dbVar:nssv15147005|dbVar:nssv15146390|dbVar:nssv15150211|dbVar:nssv15147383|dbVar:nssv15146391|dbVar:nssv15126459|dbVar:nssv15146018|dbVar:nssv15156411|dbVar:nssv15147341|dbVar:nssv15149590|dbVar:nssv15170725|dbVar:nssv15149119|dbVar:nssv15774642|dbVar:nssv15776729|dbVar:nssv15145719|dbVar:nssv15142850|dbVar:nssv15140102|dbVar:nssv15119915|dbVar:nssv15135164|dbVar:nssv18330767|dbVar:nssv15142418|dbVar:nssv15133070|dbVar:nssv15128248|dbVar:nssv18326380;po_P_gain_coord=1:47852-249228449|1:82155-249218992|1:849468-249224684|1:145764500-249233096|1:182388774-249111240|1:195483440-249213000|1:197867915-249224684|1:204045949-249218992|1:207519988-249224684|1:209819553-249225312|1:210136971-249212668|1:210152795-249218992|1:214197156-249212668|1:218252552-249224684|1:223521036-249212668|1:223972940-249224684|1:224002850-249212668|1:224016203-249185508|1:224075483-249185508|1:224105295-249224684|1:224210565-249212668|1:224284191-249212668|1:225049988-249233096|1:225626183-249060210|1:228529974-249181598|1:229158657-249212668|1:231670871-249213000|1:232232336-249218992|1:234050865-249213059|1:235582581-249224684|1:238669294-249224684|1:240407745-249185508|1:242324399-249224684|1:242656461-249213000|1:242992034-249185508|1:243095879-249158835|1:243258051-249224684|1:244197792-249224684|1:245476118-249212668|1:245665464-249233096|1:246850402-249205263;po_P_gain_percent=0.02|0.02|0.02|0.05|0.07|0.09|0.09|0.10|0.11|0.12|0.12|0.12|0.13|0.15|0.18|0.18|0.19|0.19|0.19|0.19|0.19|0.19|0.19|0.20|0.23|0.23|0.27|0.27|0.31|0.34|0.44|0.53|0.68|0.71|0.75|0.77|0.78|0.93|1.25|1.31|1.98;po_P_loss_source=dbVar:nssv15129680|dbVar:nssv18326340|dbVar:nssv15149874|dbVar:nssv15148823|dbVar:nssv15148210|dbVar:nssv15148138|dbVar:nssv15148243|dbVar:nssv15146635|dbVar:nssv15146644|dbVar:nssv15146499|dbVar:nssv15146500|dbVar:nssv18330244|dbVar:nssv15145856|dbVar:nssv15153348|dbVar:nssv15146579|dbVar:nssv15131783|dbVar:nssv18329412|dbVar:nssv15138053|dbVar:nssv15124424|dbVar:nssv18841999|dbVar:nssv15126240|dbVar:nssv15133004|dbVar:nssv15771899|dbVar:nssv15133645|dbVar:nssv15153353|dbVar:nssv15605763|dbVar:nssv18792785|dbVar:nssv15772690|dbVar:nssv16255440;po_P_loss_coord=1:146053395-249233096|1:233012995-249206918|1:235797385-249224684|1:236719383-249212668|1:237806582-249212668|1:238196876-249218733|1:238356181-249224684|1:238514422-249212668|1:238917050-249212666|1:239721731-249212668|1:239793169-249218792|1:239910961-249224684|1:240628423-249212668|1:241051171-249224684|1:241210723-249218792|1:241920552-249185508|1:242045198-249212668|1:242208582-249224684|1:243103402-249119318|1:243384761-249213309|1:243477621-249233096|1:243949932-249212668|1:244379482-249224684|1:244745426-249212668|1:244797640-249224684|1:245341154-249212429|1:245704070-249212562|1:246565045-249224684|1:246853200-249181899;po_P_loss_percent=0.05|0.29|0.35|0.37|0.41|0.42|0.43|0.44|0.45|0.49|0.50|0.50|0.54|0.57|0.58|0.64|0.65|0.67|0.78|0.80|0.81|0.89|0.96|1.04|1.05|1.21|1.33|1.75|2.00;B_loss_source=DDD:4636|DDD:4639|HI40:ISCA-46339|dbVar|dgv166e212|dgv630n100|esv2760083|esv2763780|gnomAD-SV_v2.1_DEL_1_13889,DDD:4636|DDD:4639|DDD:4645|HI40:ISCA-46339|dbVar|dgv166e212|dgv167e212|dgv630n100|dgv633n100|esv2421359|esv2660478|esv2760083|esv2763780|gnomAD-SV_v2.1_DEL_1_13889;B_loss_coord=1:248605753-248818483|1:248683401-248814080|1:248688222-248828223|1:248693963-248856466|1:248727631-248859425|1:248731000-248798200|chr1:248731000-248798200|1:248731000-248798200|1:248737436-248818471,chr1:248469040-248768529|1:248605753-248818483|1:248683401-248814080|1:248688222-248828223|1:248693963-248856466|1:248727631-248859425|1:248731000-248798200|chr1:248731000-248798200|1:248731000-248798200|1:248737436-248818471|1:248739346-248798392|1:248739502-248798200|1:248739517-248797213|1:248749183-248797201|1:248753185-248795277;B_loss_AFmax=0.2767;B_inv_source=IMH;B_inv_coord=1:248596196-248822398|1:248601499-248817009|1:248601686-248817033|1:248602851-248816084|1:248606626-248811646|1:248609654-248808661;B_inv_AFmax=0.4394;po_B_gain_someG_coord=1:248756742-248797597_1000g;po_B_loss_someG_source=1:248605753-248818483_esv2760083|1:248688222-248828223_dgv166e212|1:248712455-248757403_HI40:ISCA-46337|1:248712455-248757403_gnomAD-SV_v2.1_DEL_1_13885|1:248729000-248743000_HI40:ISCA-46338|1:248729000-248743000_gnomAD-SV_v2.1_DEL_1_13888|chr1:248731000-248798200_dbVar|1:248737436-248818471_dgv630n100|chr1:248738000-248744000_dbVar|1:248739346-248798392_esv2660478|1:248739502-248798200_DDD:4645|chr1:248741000-248749000_dbVar|chr1:248742276-248742334_dbVar|1:248753185-248795277_dgv167e212|chr1:248755655-248758478_dbVar|1:248755656-248758478_HI40:ISCA-46577|1:248755670-248758483_DDD:4648|chr1:248756741-248797597_dbVar|1:248756742-248797597_esv3589559|;po_B_loss_someG_coord=chr1:248469040-248768529_dbVar|1:248683401-248814080_esv2763780|1:248693963-248856466_DDD:4636|chr1:248712455-248757403_dbVar|1:248727631-248859425_DDD:4639|chr1:248729000-248743000_dbVar|1:248731000-248798200_HI40:ISCA-46339|1:248731000-248798200_gnomAD-SV_v2.1_DEL_1_13889|1:248738000-248744000_HI40:ISCA-46340|1:248738000-248744000_gnomAD-SV_v2.1_DEL_1_13890|chr1:248739419-248739472_dbVar|1:248739517-248797213_esv2421359|1:248741000-248749000_gnomAD-SV_v2.1_DEL_1_13892|1:248749183-248797201_dgv633n100|1:248753986-248795457_nsv514048|1:248755656-248758478_1000g|1:248755656-248758478_esv3589558|chr1:248755674-248758483_dbVar|1:248756742-248797597_1000g|1:248756881-248797809_HI40:ISCA-46576;GC_content_left=0.305;GC_content_right=0.33;SegDup_left=1:248692097-248751707;DDD_HI_percent=92.08;ExAC_synZ=0.553342166544692;ExAC_misZ=-0.565086620797697;NCBI_gene_ID=.,127069;HGNC_gene_ID=.,HGNC:19573;LOEUF_bin=9;GnomAD_pLI=0.00065559;ExAC_pLI=0.00015575;AnnotSV_ranking_score=-1;AnnotSV_ranking_criteria=1A_(cf_Gene_count,_RE_gene,_+0.00)|2F/4O_(cf_B_loss_source,_-1.00)|2B_(cf_po_P_loss_source,_HI,_OMIM_morbid,_+0.00|3A_(1_gene,_+0.00)|5F_(+0.00);ACMG_class=1,full=1;END=248785562;SVLEN=-46664\tGT\t1/.\n2\t242865921\t.\tT\t<DEL>\t.\tPASS\tAnnotSV_ID=2_242865921_243028452_DEL_1;SV_start=242865921;Biologist_ranking=Benign;Annotation_mode=full,split,split,split,split;CytoBand=q37.3;Gene_name=LINC01237|LINC01238|LOC285097|LINC01880,LINC01237,LINC01238,LOC285097,LINC01880;Closest_left=FAM240C;Closest_right=LINC03100;Gene_count=4;Tx=.,NR_110220,NR_110592,NR_149023,NR_146651;Tx_version=.,1,1,1,1;Tx_start=.,242823513,242912833,242943359,242989834;Tx_end=.,243020873,242919427,242948164,243026289;Overlapped_tx_length=.,154953,6594,4805,36455;Overlapped_CDS_length=.,0,0,0,0;Overlapped_CDS_percent=.,0,0,0,0;Exon_count=.,4,6,1,4;Location=.,intron2-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd;Location2=.,UTR,UTR,UTR,UTR;Dist_nearest_SS=.,41134,.,.,.;Nearest_SS_type=.,5',.,.,.;Intersect_start=.,242865920,242912833,242943359,242989834;Intersect_end=.,243020873,242919427,242948164,243026289;RE_gene=AGXT_(morbid/RE=ABC_enhancer)|D2HGDH_(morbid/RE=ABC_enhancer+EA_enhancer+GH_enhancer)|DTYMK_(morbid/RE=ABC_enhancer+EA_enhancer);po_P_gain_source=dbVar:nssv17976961|dbVar:nssv15174359|dbVar:nssv15174602|dbVar:nssv16254741|dbVar:nssv15147151|dbVar:nssv15147318|dbVar:nssv15146760|dbVar:nssv15121191|dbVar:nssv15134347|dbVar:nssv15120707|dbVar:nssv8639299;po_P_gain_coord=2:2-243199373|2:14239-243048760|2:15673-243101834|2:178397960-243007457|2:189682922-243007359|2:211444401-243059659|2:218966483-243059659|2:228667865-243028452|2:236177413-243059659|2:236472309-243028452|2:239873382-243006013;po_P_gain_percent=0.07|0.07|0.07|0.22|0.27|0.51|0.67|1.13|2.36|2.48|4.47;po_P_loss_phen=2q37.3_terminal_region_(includes_HDAC4);po_P_loss_source=dbVar:nssv15124851|dbVar:nssv15132233|nssv15140017|dbVar:nssv16296940|dbVar:nssv15139807|dbVar:nssv15126959|dbVar:nssv15121136|dbVar:nssv15120661|dbVar:nssv15121139|dbVar:nssv15132363|dbVar:nssv15121140|dbVar:nssv15134903|dbVar:nssv15122404|dbVar:nssv15133611|dbVar:nssv15120667|dbVar:nssv16865882|dbVar:nssv15137653|dbVar:nssv15132686|dbVar:nssv17976287|dbVar:nssv15136836|dbVar:nssv15133934|dbVar:nssv15133750|dbVar:nssv15163370|dbVar:nssv15134792|dbVar:nssv15133170|dbVar:nssv15132355|dbVar:nssv15605955|dbVar:nssv15137339|dbVar:nssv15605956|dbVar:nssv18326326|dbVar:nssv15136036|dbVar:nssv15755694|HI3:ISCA-37394|dbVar:nssv15121144|dbVar:nssv15135054|dbVar:nssv15133743|dbVar:nssv15135857|dbVar:nssv15120673|dbVar:nssv15133620|dbVar:nssv15122695|dbVar:nssv15163383|dbVar:nssv16207882|dbVar:nssv15141519|dbVar:nssv15121145;po_P_loss_coord=2:50886433-243102476|2:232634990-243059659|2:233110453-243028452|2:233784244-243040217|2:233891214-243068334|2:233995841-243028452|2:234362258-243041306|2:235081181-243028452|2:235254487-243059659|2:235576804-243059659|2:235744425-243007359|2:235937074-243008259|2:236177413-243007359|2:236649724-242974607|2:237201757-243048760|2:237322366-243059659|2:237463877-243059659|2:237619066-243048655|2:237684406-243059659|2:237875407-243007359|2:237943120-243007359|2:238037760-243101834|2:238140848-243007359|2:238434828-242938241|2:238552640-243059659|2:238795603-242918203|2:238811513-243059659|2:239071624-243048760|2:239229305-243199373|2:239742161-243059659|2:239894073-243048760|2:239954694-242930600|2:241006624-243028452|2:241006624-243059659|2:241110555-243007359|2:241127319-243059659|2:241384237-243028452|2:241446569-243007359|2:241610649-243034277|2:241847590-243101834|2:242011634-243199373|2:242045570-243040217|2:242188711-243028452;po_P_loss_percent=0.08|1.56|1.64|1.76|1.77|1.80|1.87|2.05|2.08|2.17|1.95|2.01|2.07|1.72|2.78|2.83|2.90|2.99|3.02|2.76|2.79|3.21|2.91|1.61|3.61|1.27|3.83|4.09|4.09|4.90|5.15|2.17|8.04|7.92|7.46|8.41|9.89|9.06|11.42|12.96|13.68|16.34|19.35;B_gain_source=.,.,.,TS40:ISCA-37470,1000g|TS40:ISCA-37470|dgv768e214;B_gain_coord=.,.,.,2:242930601-243102476,2:242930601-243102476|2:242988770-243037176|2:242988770-243037176;B_gain_AFmax=.,.,.,.,0.0951;B_loss_source=DDD:9221|DDD:9222|IMH|dbVar|gnomAD-SV_v2.1_DEL_2_28790,DDD:9211|DDD:9221|DDD:9222|IMH|dbVar|gnomAD-SV_v2.1_DEL_2_28790,1000g|DDD:9211|DDD:9221|DDD:9222|DDD:9226|HI40:ISCA-46585|IMH|dbVar|dgv165e55|esv3594850|esv3594853|gnomAD-SV_v2.1_DEL_2_28790,1000g|DDD:9211|DDD:9221|DDD:9222|DDD:9231|DDD:9235|HI40:ISCA-37470|HI40:ISCA-46585|IMH|dbVar|dgv165e55|dgv167e55|dgv4203n100|dgv498n27|dgv90e203|esv3594850|esv3594855|gnomAD-SV_v2.1_DEL_2_28790,1000g|DDD:9221|DDD:9222|DDD:9235|HI40:ISCA-37470|IMH|dbVar|dgv4203n100|dgv498n27|dgv90e203|esv3594857|esv3594864|gnomAD-SV_v2.1_DEL_2_28790;B_loss_coord=2:242849685-243064401|chr2:242852582-243035504|chr2:242853252-243035778|2:242853252-243035778|2:242853253-243035778|2:242853253-243035778,2:242702555-243025545|2:242849685-243064401|chr2:242852582-243035504|chr2:242853252-243035778|2:242853252-243035778|2:242853253-243035778|2:242853253-243035778,2:242516106-243014630|2:242702555-243025545|2:242849685-243064401|chr2:242852582-242959025|chr2:242852582-243035504|chr2:242853243-243019021|2:242853244-243019021|2:242853244-243019021|chr2:242853252-243035778|2:242853252-243035778|2:242853253-243035778|2:242853253-243035778|2:242867313-242921118|2:242872863-243012181|chr2:242874439-243024795|chr2:242887570-243070660|chr2:242890091-242926595|2:242890092-242926595|2:242890092-242926595|chr2:242895812-242954423,2:242516106-243014630|2:242702555-243025545|2:242849685-243064401|chr2:242852582-242959025|chr2:242852582-243035504|chr2:242853243-243019021|2:242853244-243019021|2:242853244-243019021|chr2:242853252-243035778|2:242853252-243035778|2:242853253-243035778|2:242853253-243035778|2:242872863-243012181|chr2:242874439-243024795|chr2:242887570-243070660|chr2:242895812-242954423|2:242915455-243049013|2:242915467-243089456|2:242917307-243044147|chr2:242918208-242948232|2:242918249-243014630|chr2:242919210-242952227|2:242919211-242952227|2:242919211-242952227|2:242919289-242952148|2:242922232-243083979|2:242930601-243102476|chr2:242933537-242959025|chr2:242936128-242980024|chr2:242938726-242952779|chr2:242941934-242955439,2:242849685-243064401|chr2:242852582-243035504|chr2:242853252-243035778|2:242853252-243035778|2:242853253-243035778|2:242853253-243035778|chr2:242887570-243070660|2:242915455-243049013|2:242915467-243089456|2:242917307-243044147|2:242922232-243083979|2:242930601-243102476|chr2:242944058-243035710|2:242944059-243035710|2:242944059-243035710|chr2:242988769-243037176|2:242988770-243037176|2:242988770-243037176;B_loss_AFmax=0.0686,0.0686,0.0686,0.0804,0.0804;po_B_gain_someG_source=2:242930601-243102476_TS40:ISCA-37470|2:242988770-243037176_dgv768e214|2:243027554-243069648_dgv769e214|;po_B_gain_someG_coord=2:242869276-242871593_IMH|2:242988770-243037176_1000g|2:243027554-243069648_1000g|2:243028400-243028975_nsv514985;po_B_loss_someG_source=2:242702555-243025545_DDD:9211|chr2:242851168-242874365_dbVar|2:242851169-242874365_esv3594848|chr2:242852582-243035504_dbVar|2:242852907-242902712_1000g|chr2:242853243-243019021_dbVar|2:242853244-243019021_esv3594850|2:242853252-243035778_gnomAD-SV_v2.1_DEL_2_28790|2:242853253-243035778_IMH|chr2:242860574-242892107_dbVar|2:242860575-242892107_esv3594851|2:242872863-243012181_HI40:ISCA-46585|chr2:242878551-242885258_dbVar|2:242881805-242896360_1000g|2:242881806-242896359_DDD:9229|chr2:242888545-242889711_dbVar|2:242890092-242926595_1000g|chr2:242895812-242954423_dbVar|2:242898343-242898462_1000g|chr2:242912279-242912530_dbVar...;po_B_loss_someG_coord=2:242516106-243014630_dgv165e55|2:242849685-243064401_DDD:9221|2:242851169-242874365_1000g|chr2:242852582-242959025_dbVar|chr2:242852906-242902712_dbVar|2:242852907-242902712_esv3594849|2:242853244-243019021_1000g|chr2:242853252-243035778_dbVar|2:242853253-243035778_DDD:9222|chr2:242854838-242867434_dbVar|2:242860575-242892107_1000g|2:242867313-242921118_DDD:9226|chr2:242874439-243024795_dbVar|chr2:242881804-242896360_dbVar|2:242881805-242896360_esv3594852|chr2:242887570-243070660_dbVar|chr2:242890091-242926595_dbVar|2:242890092-242926595_esv3594853|chr2:242898332-242898462_dbVar|chr2:242898343-242898462_dbVar...;GC_content_left=0.4;GC_content_right=0.46;SegDup_right=2:243007680-243062019;NCBI_gene_ID=.,101927289,101927289,.,105373979;HGNC_gene_ID=.,HGNC:49793,HGNC:49793,.,HGNC:52699;AnnotSV_ranking_score=-1;AnnotSV_ranking_criteria=1A_(cf_Gene_count,_RE_gene,_+0.00)|2F/4O_(cf_B_loss_source,_-1.00)|2B_(cf_po_P_loss_source,_HI,_OMIM_morbid,_+0.00|3A_(4_genes,_+0.00)|5F_(+0.00);ACMG_class=1,full=1,full=1,full=1,full=1;END=243028452;SVLEN=-162532\tGT\t1/.\n3\t62939218\t.\tA\t<DEL>\t.\tPASS\tAnnotSV_ID=3_62939218_65268743_DEL_1;SV_start=62939218;Biologist_annotation=VOUS_in_2017,_reclassified_in_2020;Biologist_ranking=Pathogenic;Annotation_mode=full,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split;CytoBand=p14.2-p14.1,p14.2,p14.2,p14.2,p14.2,p14.1,p14.1,p14.1,p14.1,p14.1,p14.1,p14.1,p14.1,p14.1,p14.1,p14.1,p14.1,p14.1,p14.1,p14.1,p14.1,p14.1,p14.1,p14.1;Gene_name=LINC00698|SYNPR|SYNPR-AS1|SNTN|CDHR18P|C3orf49|THOC7|THOC7-AS1|ATXN7|SCAANT1|PSMD6-AS2|PSMD6|PSMD6-AS1|PRICKLE2-AS1|LINC00994|PRICKLE2|PRICKLE2-AS2|PRICKLE2-AS3|PRICKLE2-DT|ADAMTS9|ADAMTS9-AS1|ADAMTS9-AS2|LINC02040,LINC00698,SYNPR,SYNPR-AS1,SNTN,CDHR18P,C3orf49,THOC7,THOC7-AS1,ATXN7,SCAANT1,PSMD6-AS2,PSMD6,PSMD6-AS1,PRICKLE2-AS1,LINC00994,PRICKLE2,PRICKLE2-AS2,PRICKLE2-AS3,PRICKLE2-DT,ADAMTS9,ADAMTS9-AS1,ADAMTS9-AS2,LINC02040;Closest_left=CADPS;Closest_right=MAGI1;Gene_count=23;Tx=.,NR_027104,NM_001130003,NR_046677,NM_001348756,NR_171774,NM_001355236,NM_025075,NR_104326,NM_001177387,NR_148359,NR_038286,NM_001271779,NR_189168,NR_045697,NR_033978,NM_001370528,NR_046701,NR_046702,NR_183712,NM_182920,NR_110150,NR_038264,NR_183715;Tx_version=.,1,2,1,2,1,2,4,1,1,2,1,2,1,1,1,1,1,1,1,2,1,1,1;Tx_start=.,63088363,63263983,63409271,63638350,63727499,63804974,63819545,63846320,63884074,63897187,63989697,63996226,63997639,64053639,64064036,64077911,64089145,64173219,64430932,64501329,64547021,64670545,65160613;Tx_end=.,63110738,63602600,63535727,63650888,63799313,63834312,63849481,63847495,63989138,63898059,63997919,64009170,64001938,64088807,64073039,64253849,64092034,64187237,64441746,64673676,64575760,64997143,65179178;Overlapped_tx_length=.,22375,338617,126456,12538,71814,29338,29936,1175,105064,872,8222,12944,4299,35168,9003,175938,2889,14018,10814,172347,28739,326598,18565;Overlapped_CDS_length=.,0,858,0,534,0,879,615,0,2838,0,0,1329,0,0,0,2535,0,0,0,5808,0,0,0;Overlapped_CDS_percent=.,0,100,0,100,0,100,100,0,100,0,0,100,0,0,0,100,0,0,0,100,0,0,0;Frameshift=.,.,no,.,no,.,no,no,.,no,.,.,no,.,.,.,no,.,.,.,no,.,.,.;Exon_count=.,7,6,5,5,9,7,8,2,13,1,3,9,2,3,4,8,4,4,4,40,3,6,5;Location=.,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd;Location2=.,UTR,5'UTR-3'UTR,UTR,5'UTR-3'UTR,UTR,5'UTR-3'UTR,5'UTR-3'UTR,UTR,5'UTR-3'UTR,UTR,UTR,5'UTR-3'UTR,UTR,UTR,UTR,5'UTR-3'UTR,UTR,UTR,UTR,5'UTR-3'UTR,UTR,UTR,UTR;Intersect_start=.,63088363,63263983,63409271,63638350,63727499,63804974,63819545,63846320,63884074,63897187,63989697,63996226,63997639,64053639,64064036,64077911,64089145,64173219,64430932,64501329,64547021,64670545,65160613;Intersect_end=.,63110738,63602600,63535727,63650888,63799313,63834312,63849481,63847495,63989138,63898059,63997919,64009170,64001938,64088807,64073039,64253849,64092034,64187237,64441746,64673676,64575760,64997143,65179178;RE_gene=SLC25A26_(morbid/RE=ABC_enhancer);P_loss_phen=Spinocerebellar_ataxia_7,_164500_(3)_AD,.,.,.,.,.,.,.,.,Spinocerebellar_ataxia_7,_164500_(3)_AD,.,.,.,.,.,.,.,.,.,.,.,.,.,.;P_loss_source=morbid:ATXN7,.,.,.,.,.,.,.,.,morbid:ATXN7,.,.,.,.,.,.,.,.,.,.,.,.,.,.;P_loss_coord=3:63953470-63989138,.,.,.,.,.,.,.,.,3:63953470-63989138,.,.,.,.,.,.,.,.,.,.,.,.,.,.;po_P_gain_source=dbVar:nssv15162889|dbVar:nssv15164144|dbVar:nssv15149891|nssv15151839;po_P_gain_coord=3:60175-197948027|3:61496-197838262|3:61893-197851986;po_P_gain_percent=1.18|1.18|1.18;po_P_loss_source=dbVar:nssv15146214|dbVar:nssv15774780|dbVar:nssv15148889|dbVar:nssv15147494|dbVar:nssv17956097|dbVar:nssv16207905|dbVar:nssv15150232|dbVar:nssv15146193|dbVar:nssv15120308;po_P_loss_coord=3:54079046-66046136|3:57076137-65716956|3:57174453-90309110|3:57416266-64870197|3:59332509-70686155|3:60449668-65561638|3:60526227-63742930|3:61956522-68514983|3:64746925-78459248;po_P_loss_percent=19.47|26.96|7.03|25.91|20.52|45.57|24.99|35.52|3.81;P_snvindel_nb=2,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,2,.,.,.,.,.,.,.;P_snvindel_phen=Progressive_myoclonic_epilepsy_type_5|See_cases,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,Progressive_myoclonic_epilepsy_type_5|See_cases,.,.,.,.,.,.,.;B_inv_source=IMH;B_inv_coord=3:1200531-154949082|3:38627146-149162150;B_inv_AFmax=0.3422;po_B_gain_someG_source=3:63725720-63725786_gnomAD-SV_v2.1_DUP_3_8770|3:64533160-64535613_gnomAD-SV_v2.1_DUP_3_8779;po_B_gain_someG_coord=3:63224614-63225527_IMH|3:64533160-64535613_IMH;po_B_loss_someG_source=chr3:62952324-62973934_dbVar|chr3:62959476-62994696_dbVar|chr3:62959774-62994551_dbVar|chr3:62986070-62987837_dbVar|chr3:63006837-63007330_dbVar|chr3:63072271-63072321_dbVar|chr3:63103673-63107733_dbVar|3:63104370-63107212_1000g|chr3:63128000-63139500_dbVar|3:63134848-63135305_1000g|chr3:63134856-63135309_dbVar|chr3:63134857-63135309_dbVar|3:63134857-63135309_gnomAD-SV_v2.1_DEL_3_33028|chr3:63164118-63164190_dbVar|chr3:63182335-63190512_dbVar|chr3:63184629-63185275_dbVar|chr3:63256602-63256696_dbVar|chr3:63321371-63322219_dbVar|chr3:63347273-63347343_dbVar|chr3:63382056-63382224_dbVar...;po_B_loss_someG_coord=chr3:62938181-62985344_dbVar|chr3:62959345-62994669_dbVar|chr3:62959750-62999530_dbVar|chr3:62986062-62987807_dbVar|chr3:62992485-62993266_dbVar|chr3:63059041-63059108_dbVar|chr3:63081900-63082834_dbVar|chr3:63104369-63107212_dbVar|chr3:63119026-63120115_dbVar|chr3:63134847-63135305_dbVar|3:63134848-63135305_esv3596388|3:63134857-63135309_DDD:10454|3:63134857-63135309_esv2677248|3:63134858-63135309_IMH|chr3:63166947-63171818_dbVar|chr3:63184317-63184367_dbVar|chr3:63244236-63244406_dbVar|chr3:63299578-63299744_dbVar|chr3:63343372-63344883_dbVar|chr3:63353029-63353568_dbVar...;GC_content_left=0.355;GC_content_right=0.43;Repeat_coord_left=3:62939271-62939427;Repeat_type_left=MER5A1;Repeat_coord_right=3:65268746-65268796|3:65268797-65269299;Repeat_type_right=LTR16B|L1MB2;DDD_HI_percent=68.54,.,27.35,.,66.14,.,68.54,7.39,.,17.72,.,.,8.63,.,.,.,19.72,.,.,.,31.58,.,.,.;ExAC_delZ=0.730304227093642,.,.,.,0.0947592166796515,.,.,0.226822637024357,.,0.730304227093642,.,.,0.167507008532066,.,.,.,0.557303960601498,.,.,.,-1.39811826175974,.,.,.;ExAC_dupZ=1.22944963357105,.,.,.,-0.338299474644844,.,.,-2.4455441384945,.,0.636006512326363,.,.,0.979835184836382,.,.,.,1.22944963357105,.,.,.,-0.477054147176997,.,.,.;ExAC_cnvZ=1.15014257139245,.,.,.,-0.173049359454575,.,.,-1.79937886551949,.,0.862222958307612,.,.,0.835574002005388,.,.,.,1.15014257139245,.,.,.,-0.711187689176027,.,.,.;ExAC_synZ=0.85336181383742,.,-0.433167561551584,.,-0.0258588646723899,.,.,-0.696357556154856,.,0.85336181383742,.,.,-0.764855351937167,.,.,.,0.337534415605819,.,.,.,-0.797615479905467,.,.,.;ExAC_misZ=2.61388539526619,.,-0.551647400212283,.,-1.1196806141136,.,.,1.21996216564798,.,0.386394557252369,.,.,1.81088903222596,.,.,.,2.61388539526619,.,.,.,0.510431064472241,.,.,.;GenCC_disease=.,.,.,.,.,.,.,.,.,autosomal_dominant_cerebellar_ataxia_type_II|spinocerebellar_ataxia_type_7,.,.,.,.,.,.,complex_neurodevelopmental_disorder|neurodevelopmental_disorder,.,.,.,ciliopathy|nephronophthisis_1,.,.,.;GenCC_moi=.,.,.,.,.,.,.,.,.,AD,.,.,.,.,.,.,AD|AR,.,.,.,AR,.,.,.;GenCC_classification=.,.,.,.,.,.,.,.,.,Moderate|Strong|Supportive,.,.,.,.,.,.,Limited,.,.,.,Limited|Supportive,.,.,.;GenCC_pmid=.,.,.,.,.,.,.,.,.,20301317[PMID]|9288099,.,.,.,.,.,.,.,.,.,.,30609407[PMID],.,.,.;NCBI_gene_ID=.,285401,132204,.,132203,100130345,132200,80145,.,6314,100861563,100507062,9861,.,100652759,100287879,166336,.,.,101929316,56999,101929335,100507098,102724763;HGNC_gene_ID=.,HGNC:27720,HGNC:16507,.,HGNC:33706,HGNC:53742,HGNC:25190,HGNC:29874,.,HGNC:10560,HGNC:43718,HGNC:44125,HGNC:9564,.,HGNC:40916,HGNC:48949,HGNC:20340,.,.,HGNC:52829,HGNC:13202,HGNC:40625,HGNC:42435,HGNC:52880;OMIM_ID=607640,.,.,.,.,.,.,.,.,607640,.,.,.,.,.,.,.,.,.,.,.,.,.,.;OMIM_phenotype=.,.,.,.,.,.,.,.,.,Spinocerebellar_ataxia_7,_164500_(3)_AD,.,.,.,.,.,.,.,.,.,.,.,.,.,.;OMIM_inheritance=.,.,.,.,.,.,.,.,.,AD,.,.,.,.,.,.,.,.,.,.,.,.,.,.;OMIM_morbid=yes,.,.,.,.,.,.,.,.,yes,.,.,.,.,.,.,.,.,.,.,.,.,.,.;LOEUF_bin=0,.,4,.,9,.,7,4,.,1,.,.,0,.,.,.,1,.,.,.,1,.,.,.;GnomAD_pLI=0.99544,.,0.0041913,.,0.00010257,.,4.0628e-08,0.0060818,.,0.9595,.,.,0.99518,.,.,.,0.99544,.,.,.,1.0004e-06,.,.,.;ExAC_pLI=0.98784,.,0.17171,.,0.0027379,.,.,0.97832,.,0.92856,.,.,0.96209,.,.,.,0.98784,.,.,.,4.2266e-07,.,.,.;AnnotSV_ranking_score=1;AnnotSV_ranking_criteria=1A_(cf_Gene_count,_RE_gene,_+0.00)|2A_(cf_P_loss_source,_+1.00)|3A_(23_genes,_+0.00)|5F_(+0.00);ACMG_class=5,full=5,full=5,full=5,full=5,full=5,full=5,full=5,full=5,full=5,full=5,full=5,full=5,full=5,full=5,full=5,full=5,full=5,full=5,full=5,full=5,full=5,full=5,full=5;END=65268743;SVLEN=-2329526\tGT\t1/.\n3\t97483034\t.\tA\t<DEL>\t.\tPASS\tAnnotSV_ID=3_97483034_97487074_DEL_1;SV_start=97483034;Biologist_annotation=BBS3/ARL6_promotor_overlapped;Biologist_ranking=Pathogenic;Annotation_mode=full,split;CytoBand=q11.2;Gene_name=ARL6;Closest_left=EPHA6;Closest_right=CRYBG3;Gene_count=1;Tx=.,NM_032146;Tx_version=.,5;Tx_start=.,97483364;Tx_end=.,97520086;Overlapped_tx_length=.,3710;Overlapped_CDS_length=.,123;Overlapped_CDS_percent=.,21;Frameshift=.,no;Exon_count=.,9;Location=.,txStart-intron3;Location2=.,5'UTR-CDS;Dist_nearest_SS=.,0;Nearest_SS_type=.,5';Intersect_start=.,97483364;Intersect_end=.,97487074;P_loss_source=dbVar:nssv16214088;P_loss_coord=3:97486953-97487074;po_P_gain_source=dbVar:nssv15162889|dbVar:nssv15164144|dbVar:nssv15149891|nssv15151839|dbVar:nssv17976063|dbVar:nssv15148953|dbVar:nssv15148997;po_P_gain_coord=3:60175-197948027|3:61496-197838262|3:61893-197851986|3:72488758-99614758|3:93519465-145413168|3:93538468-103607593;po_P_gain_percent=0.00|0.00|0.00|0.01|0.01|0.04;po_P_loss_phen=Bardet-Biedl_syndrome_3,_600151_(3)_AR|Retinitis_pigmentosa_55,_613575_(3)_AR|Bardet-Biedl_syndrome_1,_modifier_of,_209900_(3)_Digenic_recessive,AR;po_P_loss_source=dbVar:nssv15147282|dbVar:nssv15146259|dbVar:nssv18842017|dbVar:nssv16254235|dbVar:nssv17171854|morbid:ARL6|dbVar:nssv18326626|dbVar:nssv17971170;po_P_loss_coord=3:93538468-116605903|3:93605516-122935530|3:93698392-124492857|3:95563097-102371126|3:97194197-97510809|3:97483602-97520073|3:97483823-97499002|3:97486953-97516893;po_P_loss_percent=0.02|0.01|0.01|0.06|1.28|9.52|21.42|0.41;P_snvindel_nb=5;P_snvindel_phen=ARL6-related_disorder|Bardet-Biedl_syndrome_1|Bardet-Biedl_syndrome_3|Retinal_dystrophy|Retinitis_pigmentosa|Retinitis_pigmentosa_55;B_loss_source=dbVar;B_loss_coord=chr3:97481287-97495551;B_loss_AFmax=0.01;B_inv_source=IMH;B_inv_coord=3:1200531-154949082|3:38627146-149162150|3:75497389-125619977;B_inv_AFmax=0.3422;po_B_loss_someG_coord=chr3:97481287-97495551_dbVar;GC_content_left=0.455;GC_content_right=0.335;HI=.,30;TS=.,0;DDD_HI_percent=10.16;ExAC_delZ=0.309918017790144;ExAC_dupZ=-0.416168538751037;ExAC_cnvZ=-0.151628993663861;ExAC_synZ=-0.139439307213778;ExAC_misZ=-0.254839803839483;GenCC_disease=.,Bardet-Biedl_syndrome|Bardet-Biedl_syndrome_3|retinitis_pigmentosa|retinitis_pigmentosa_55;GenCC_moi=.,AD|AR;GenCC_classification=.,Strong|Supportive;GenCC_pmid=.,15258860|15314642|19858128|19956407|20142850|20301537[PMID]|20301590[PMID]|20333246|21282186|22085962|22334370|250666|26355662|26489029|27124789|27486776|28130426|28502102|31736247;NCBI_gene_ID=.,84100;HGNC_gene_ID=.,HGNC:13210;OMIM_ID=608845;OMIM_phenotype=.,Bardet-Biedl_syndrome_3,_600151_(3)_AR|Retinitis_pigmentosa_55,_613575_(3)_AR|(Bardet-Biedl_syndrome_1,_modifier_of),_209900_(3)_Digenic_recessive,AR;OMIM_inheritance=.,AR|Digenic_recessive,AR;OMIM_morbid=yes;OMIM_morbid_candidate=yes;LOEUF_bin=5;GnomAD_pLI=0.01013;ExAC_pLI=0.0042709;AnnotSV_ranking_score=1;AnnotSV_ranking_criteria=1A_(cf_Gene_count,_RE_gene,_+0.00)|2A_(cf_P_loss_source,_+1.00)|3A_(1_gene,_+0.00)|5F_(+0.00);ACMG_class=5,full=5;END=97487074;SVLEN=-4041\tGT\t1/.\n3\t195419169\t.\tA\t<DEL>\t.\tPASS\tAnnotSV_ID=3_195419169_195472855_DEL_1;SV_start=195419169;Biologist_ranking=Benign;Annotation_mode=full,split,split,split;CytoBand=q29;Gene_name=MIR570HG|MIR570|MUC20,MIR570HG,MIR570,MUC20;Closest_left=SDHAP2;Closest_right=MUC4;Gene_count=3;Tx=.,NR_122105,NR_030296,NM_001282506;Tx_version=.,1,1,2;Tx_start=.,195415368,195426271,195447848;Tx_end=.,195438746,195426368,195460422;Overlapped_tx_length=.,19578,97,12574;Overlapped_CDS_length=.,0,0,2130;Overlapped_CDS_percent=.,0,0,100;Frameshift=.,.,.,no;Exon_count=.,5,1,4;Location=.,intron2-txEnd,txStart-txEnd,txStart-txEnd;Location2=.,UTR,UTR,5'UTR-3'UTR;Dist_nearest_SS=.,2859,.,.;Nearest_SS_type=.,5',.,.;Intersect_start=.,195419168,195426271,195447848;Intersect_end=.,195438746,195426368,195460422;RE_gene=ABCB7_(morbid/RE=mTL_miRNA)|ABHD5_(morbid/RE=mTL_miRNA)|ADAM22_(morbid/RE=mTL_miRNA)|ANXA11_(morbid/RE=mTL_miRNA)|ARL6IP1_(morbid/RE=mTL_miRNA)|ATP6V1B2_(morbid/RE=mTL_miRNA)|BICD2_(morbid/RE=mTL_miRNA)|BLOC1S6_(morbid/RE=mTL_miRNA)|BTD_(morbid/RE=mTL_miRNA)|CALM1_(morbid/RE=mTL_miRNA)|CALM3_(morbid/RE=mTL_miRNA)|CAVIN1_(morbid/RE=mTL_miRNA)|CBFB_(morbid/RE=mTL_miRNA)|CCDC115_(morbid/RE=mTL_miRNA)|CDKN1B_(HI=3/morbid/RE=mTL_miRNA)|CHD1_(morbid/RE=mTL_miRNA)|CHSY1_(morbid/RE=mTL_miRNA)|CLCN3_(morbid/RE=mTL_miRNA)|CRTAP_(morbid/RE=mTL_miRNA)|CSNK2A1_(morbid/RE=mTL_miRNA)|DDHD1_(morbid/RE=mTL_miRNA)|ELOVL5_(morbid/RE=mTL_miRNA)|EPG5_(morbid/RE=mTL_miRNA)|ESCO2_(morbid/RE=mTL_miRNA)|EXOC2_(morbid/RE=mTL_miRNA)|FBXW7_(morbid/RE=mTL_miRNA)|FTH1_(morbid/RE=mTL_miRNA)|GDF6_(morbid/RE=mTL_miRNA)|GSR_(morbid/RE=mTL_miRNA)|HNRNPA2B1_(morbid/RE=mTL_miRNA)|IGF1R_(HI=3/morbid/RE=mTL_miRNA)|IL6R_(morbid/RE=mTL_miRNA)|IREB2_(morbid/RE=mTL_miRNA)|KCNB1_(morbid/RE=mTL_miRNA)|KLHL15_(morbid/RE=mTL_miRNA)|KREMEN1_(morbid/RE=mTL_miRNA)|LEMD2_(morbid/RE=mTL_miRNA)|MRPL3_(morbid/RE=mTL_miRNA)|MYO1C_(morbid/RE=mTL_miRNA)|NDRG1_(morbid/RE=mTL_miRNA)|NDUFA12_(morbid/RE=mTL_miRNA)|P3H2_(morbid/RE=mTL_miRNA)|PAX2_(HI=3/morbid/RE=mTL_miRNA)|PCYT1A_(morbid/RE=GH_promoter_enhancer)|PEX2_(morbid/RE=mTL_miRNA)|PGK1_(morbid/RE=mTL_miRNA)|PHF6_(HI=3/morbid/RE=mTL_miRNA)|RAC1_(morbid/RE=mTL_miRNA)|RNF168_(morbid/RE=GH_enhancer+GH_promoter_enhancer)|SAMD12_(morbid/RE=mTL_miRNA)...;po_P_gain_source=dbVar:nssv15162889|dbVar:nssv15164144|dbVar:nssv15149891|nssv15151839|dbVar:nssv15148025|dbVar:nssv15146977|dbVar:nssv15145927|dbVar:nssv15147555|dbVar:nssv15147518|dbVar:nssv15145707|dbVar:nssv15149548|dbVar:nssv15148262|dbVar:nssv15146719|dbVar:nssv18326383|dbVar:nssv15164224|dbVar:nssv15147464|dbVar:nssv15148839|dbVar:nssv15142547|dbVar:nssv15153539|dbVar:nssv17976740|dbVar:nssv15153542|dbVar:nssv15153544|dbVar:nssv15164241|dbVar:nssv15152868|dbVar:nssv15755821|dbVar:nssv15146377|dbVar:nssv15146980|dbVar:nssv15153546|dbVar:nssv15145873|dbVar:nssv15149008|dbVar:nssv15145905|dbVar:nssv15146981|dbVar:nssv16254509|dbVar:nssv16736615|dbVar:nssv15148110;po_P_gain_coord=3:60175-197948027|3:61496-197838262|3:61893-197851986|3:103145727-197837049|3:147239680-197823436|3:151818302-197845254|3:155836231-197851986|3:156039668-197840323|3:157011168-197861598|3:158980632-197766890|3:165854998-197851986|3:167885357-197837049|3:171549422-198022430|3:173281267-197838262|3:175886314-197845254|3:176157700-197845254|3:177246494-197837049|3:182539235-197851986|3:183498521-197851986|3:184003968-197851986|3:186374366-197851986|3:186374672-197838262|3:187913568-197851986|3:188386567-197838262|3:188983161-197837049|3:190385453-197837049|3:191593620-197851986|3:192470727-197845254|3:193422395-197851986|3:194013987-197837069|3:194145226-197895629|3:195068029-197851986|3:195419169-197387258|3:195438670-197837049;po_P_gain_percent=0.03|0.03|0.03|0.06|0.11|0.12|0.13|0.13|0.13|0.14|0.17|0.18|0.20|0.22|0.24|0.25|0.26|0.35|0.37|0.39|0.47|0.47|0.54|0.57|0.61|0.72|0.86|1.00|1.21|1.40|1.43|1.93|2.73|1.43;po_P_loss_source=dbVar:nssv15146266|dbVar:nssv15128822|dbVar:nssv15165459|dbVar:nssv17955845|dbVar:nssv17955930|dbVar:nssv15145831;po_P_loss_coord=3:185203638-197837049|3:185599935-196462295|3:189101447-197838262|3:189608637-197532175|3:191866467-197842171|3:194059264-197420612;po_P_loss_percent=0.42|0.49|0.61|0.68|0.90|1.60;B_gain_source=DDD:12528|TS40:ISCA-46592|esv2760775|esv2763776,1000g|DDD:12519|DDD:12528|DDD:12530|TS40:ISCA-46592|dgv967e214|esv2760775|esv2763776,1000g|DDD:12519|DDD:12528|DDD:12530|TS40:ISCA-46592|dgv967e214|esv2760775|esv2763776,DDD:12519|DDD:12528|DDD:12530|TS40:ISCA-46592|esv2760775|esv2763776;B_gain_coord=3:195240825-195502119|3:195376589-195493533|3:195383143-195502119|3:195385823-195474165,3:195240825-195502119|3:195320057-195470538|3:195376589-195493533|3:195383143-195502119|3:195385823-195474165|3:195417631-195471708|3:195417836-195445776|3:195417836-195445776|3:195417836-195445776|3:195417836-195445776|3:195417836-195445776,3:195240825-195502119|3:195320057-195470538|3:195376589-195493533|3:195383143-195502119|3:195385823-195474165|3:195417631-195471708|3:195417836-195445776|3:195417836-195445776|3:195417836-195445776|3:195417836-195445776|3:195417836-195445776,3:195240825-195502119|3:195320057-195470538|3:195376589-195493533|3:195383143-195502119|3:195385823-195474165|3:195417631-195471708;B_gain_AFmax=0.03,0.4682,0.4682,0.0556;B_loss_source=DDD:12528|esv2760775|esv2763776,DDD:12519|DDD:12528|DDD:12530|HI40:ISCA-46589|dgv5017n100|esv2760775|esv2763776,DDD:12519|DDD:12528|DDD:12530|HI40:ISCA-46589|dgv5017n100|esv2760775|esv2763776,DDD:12519|DDD:12528|DDD:12530|HI40:ISCA-46589|esv2760775|esv2763776;B_loss_coord=3:195240825-195502119|3:195383143-195502119|3:195385823-195474165,3:195240825-195502119|3:195320057-195470538|3:195380279-195469564|3:195383131-195446910|3:195383143-195502119|3:195385823-195474165|3:195417631-195471708,3:195240825-195502119|3:195320057-195470538|3:195380279-195469564|3:195383131-195446910|3:195383143-195502119|3:195385823-195474165|3:195417631-195471708,3:195240825-195502119|3:195320057-195470538|3:195380279-195469564|3:195383143-195502119|3:195385823-195474165|3:195417631-195471708;B_loss_AFmax=0.03,0.0746,0.0746,0.0746;B_inv_source=IMH;B_inv_coord=3:195371562-197367616|3:195376259-197363816|3:195409822-195693354|3:195413625-195689159|3:195417390-195684632|3:195418302-195683569;B_inv_AFmax=0.1142;po_B_gain_someG_source=3:195320057-195470538_DDD:12519|3:195383143-195502119_esv2760775|3:195417631-195471708_DDD:12530|3:195417836-195445776_1000g|3:195417836-195445776_1000g|3:195428197-195442889_nsv515001|3:195452013-195457240_1000g|3:195454692-195475463_DDD:12537|3:195457142-195468593_1000g|3:195457142-195468593_dgv969e214;po_B_gain_someG_coord=3:195240825-195502119_esv2763776|3:195376589-195493533_TS40:ISCA-46592|3:195385823-195474165_DDD:12528|3:195417836-195445776_1000g|3:195417836-195445776_1000g|3:195417836-195445776_dgv967e214|3:195452013-195457240_1000g|3:195452013-195457240_dgv968e214|3:195457000-195471300_gnomAD-SV_v2.1_DUP_3_10621|3:195457142-195468593_1000g;po_B_loss_someG_source=3:195320057-195470538_DDD:12519|3:195383131-195446910_dgv5017n100|3:195385823-195474165_DDD:12528|chr3:195425199-195425686_dbVar|3:195454692-195475463_DDD:12537|3:195457142-195471062_dgv970e214|chr3:195457317-195471062_dbVar|chr3:195463643-195463762_dbVar;po_B_loss_someG_coord=3:195240825-195502119_esv2763776|3:195380279-195469564_HI40:ISCA-46589|3:195383143-195502119_esv2760775|3:195417631-195471708_DDD:12530|chr3:195451991-195452447_dbVar|chr3:195457141-195468593_dbVar|3:195457249-195471074_dgv906e199|3:195457318-195471062_1000g;GC_content_left=0.47;GC_content_right=0.415;Repeat_coord_left=3:195418975-195419071;Repeat_type_left=MER3;SegDup_left=3:195413607-195420395;ENCODE_blacklist_left=3:195341901-195476900;ENCODE_blacklist_characteristics_left=High_Signal_Region;ENCODE_blacklist_right=3:195341901-195476900;ENCODE_blacklist_characteristics_right=High_Signal_Region;DDD_HI_percent=95.22,.,.,95.22;NCBI_gene_ID=.,440993,693155,200958;HGNC_gene_ID=.,HGNC:53743,HGNC:32826,HGNC:23282;LOEUF_bin=6,.,.,6;GnomAD_pLI=0.0047211,.,.,0.0047211;AnnotSV_ranking_score=-1;AnnotSV_ranking_criteria=1A_(cf_Gene_count,_RE_gene,_+0.00)|2F/4O_(cf_B_loss_source,_-1.00)|2B_(cf_po_P_loss_source,_HI,_OMIM_morbid,_+0.00|3A_(3_genes,_+0.00)|5F_(+0.00);ACMG_class=1,full=1,full=1,full=1;END=195472855;SVLEN=-53687\tGT\t1/.\n4\t71553\t.\tG\t<DEL>\t.\tPASS\tAnnotSV_ID=4_71553_9371067_DEL_1;SV_start=71553;Biologist_annotation=4p-_syndrom;Biologist_ranking=Pathogenic;Annotation_mode=full,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split;CytoBand=p16.3-p16.1,p16.3,p16.3,p16.3,p16.3,p16.3,p16.3,p16.3,p16.3,p16.3,p16.3,p16.3,p16.3,p16.3,p16.3,p16.3,p16.3,p16.3,p16.3,p16.3,p16.3,p16.3,p16.3,p16.3,p16.3,p16.3,p16.3,p16.3,p16.3,p16.3,p16.3,p16.3,p16.3,p16.3,p16.3,p16.3,p16.3,p16.3,p16.3,p16.3,p16.3,p16.3,p16.3,p16.3,p16.3,p16.3,p16.3,p16.3,p16.3,p16.3,p16.3,p16.3,p16.3,p16.3,p16.3,p16.3,p16.3,p16.3,p16.3,p16.3,p16.3,p16.3,p16.3,p16.3,p16.3,p16.3,p16.3,p16.3,p16.3,p16.3,p16.3,p16.3,p16.3,p16.3,p16.3,p16.3,p16.3,p16.3,p16.3,p16.3,p16.3-p16.2,p16.3,p16.2,p16.2,p16.2,p16.2,p16.2,p16.2,p16.2,p16.2,p16.2,p16.2,p16.2,p16.2,p16.2,p16.2-p16.1,p16.1,p16.1,p16.1,p16.1,p16.1,p16.1,p16.1,p16.1,p16.1,p16.1,p16.1,p16.1,p16.1,p16.1,p16.1,p16.1,p16.1,p16.1,p16.1,p16.1,p16.1,p16.1,p16.1,p16.1,p16.1,p16.1,p16.1,p16.1,p16.1,p16.1,p16.1,p16.1,p16.1,p16.1,p16.1,p16.1,p16.1,p16.1,p16.1,p16.1,p16.1,p16.1,p16.1,p16.1,p16.1,p16.1,p16.1,p16.1,p16.1,p16.1,p16.1,p16.1,p16.1,p16.1,p16.1,p16.1,p16.1,p16.1,p16.1,p16.1;Gene_name=ZNF595|ZNF718|ZNF876P|ZNF732|ZNF141|MIR571|ABCA11P|ZNF721|PIGG|TMEM271|LOC105374338|PDE6B|PDE6B-AS1|ATP5ME|MYL5|SLC49A3|PCGF3|PCGF3-AS1|CPLX1|GAK|TMEM175|DGKQ|SLC26A1|IDUA|FGFRL1|RNF212|LOC105374344|TMED11P|SPON2|LOC100130872|CTBP1-AS|CTBP1|CTBP1-DT|MAEA|UVSSA|NKX1-1|FAM53A|SLBP|TMEM129|TACC3|FGFR3|LETM1|NSD2|SCARNA22|NELFA|MIR943|NICOL1|NAT8L|POLN|HAUS3|MXD4|MIR4800|ZFYVE28|CFAP99|RNF4|FAM193A|TNIP2|SH3BP2|ADD1|MFSD10|NOP14-AS1|NOP14|GRK4|HTT-AS|HTT|MSANTD1|RGS12|HGFAC|DOK7|LRPAP1|LINC00955|LINC02171|ADRA2C|FAM86EP|OTOP1|TMEM128|LYAR|ZBTB49|NSG1|STX18|STX18-IT1|STX18-AS1|SNORD162|LOC101928279|LINC01396|MSX1|LOC101928306|CYTL1|STK32B|LINC01587|EVC2|EVC|CRMP1|MIR378D1|C4orf50|JAKMIP1|LOC128125818|JAKMIP1-DT|WFS1|PPP2R2C|MAN2B2|MRFAP1|LINC02482|MRFAP1L2|LINC02481|S100P|MRFAP1L1|BLOC1S4|KIAA0232|TBC1D14|LOC100129931|CFAP184|TADA2B|GRPEL1|LINC02447|SORCS2|MIR4798|PSAPL1|MIR4274|AFAP1-AS1|AFAP1|LOC389199|ABLIM2|MIR95|SH3TC1|HTRA3|LINC02517|ACOX3|TRMT44|GPR78|CPZ|LOC101928532|HMX1|FAM90A26|USP17L10|USP17L11|USP17L12|USP17L13|USP17L15|USP17L17|USP17L18|USP17L19|USP17L20|USP17L21|USP17L22|USP17L24|USP17L25|USP17L26|USP17L5|USP17L27|USP17L28|USP17L29|USP17L9P|USP17L30|USP17L6P,ZNF595,ZNF718,ZNF876P,ZNF732,ZNF141,MIR571,ABCA11P,ZNF721,PIGG,TMEM271,LOC105374338,PDE6B,PDE6B-AS1,ATP5ME,MYL5,SLC49A3,PCGF3,PCGF3-AS1,CPLX1,GAK,TMEM175,DGKQ,SLC26A1,IDUA,FGFRL1,RNF212,LOC105374344,TMED11P,SPON2,LOC100130872,CTBP1-AS,CTBP1,CTBP1-DT,MAEA,UVSSA,NKX1-1,FAM53A,SLBP,TMEM129,TACC3,FGFR3,LETM1,NSD2,SCARNA22,NELFA,MIR943,NICOL1,NAT8L,POLN,HAUS3,MXD4,MIR4800,ZFYVE28,CFAP99,RNF4,FAM193A,TNIP2,SH3BP2,ADD1,MFSD10,NOP14-AS1,NOP14,GRK4,HTT-AS,HTT,MSANTD1,RGS12,HGFAC,DOK7,LRPAP1,LINC00955,LINC02171,ADRA2C,FAM86EP,OTOP1,TMEM128,LYAR,ZBTB49,NSG1,STX18,STX18-IT1,STX18-AS1,SNORD162,LOC101928279,LINC01396,MSX1,LOC101928306,CYTL1,STK32B,LINC01587,EVC2,EVC,CRMP1,MIR378D1,C4orf50,JAKMIP1,LOC128125818,JAKMIP1-DT,WFS1,PPP2R2C,MAN2B2,MRFAP1,LINC02482,MRFAP1L2,LINC02481,S100P,MRFAP1L1,BLOC1S4,KIAA0232,TBC1D14,LOC100129931,CFAP184,TADA2B,GRPEL1,LINC02447,SORCS2,MIR4798,PSAPL1,MIR4274,AFAP1-AS1,AFAP1,LOC389199,ABLIM2,MIR95,SH3TC1,HTRA3,LINC02517,ACOX3,TRMT44,GPR78,CPZ,LOC101928532,HMX1,FAM90A26,USP17L10,USP17L11,USP17L12,USP17L13,USP17L15,USP17L17,USP17L18,USP17L19,USP17L20,USP17L21,USP17L22,USP17L24,USP17L25,USP17L26,USP17L5,USP17L27,USP17L28,USP17L29,USP17L9P,USP17L30,USP17L6P;Closest_right=DEFB131A;Gene_count=155;Tx=.,NM_001286052,NM_001039127,NR_027481,NM_001137608,NM_003441,NR_030297,NR_002451,NM_133474,NM_001127178,NM_001362796,NR_148199,NM_000283,NR_183810,NM_007100,NM_001395441,NM_001294341,NM_001317836,NR_171661,NM_006651,NM_005255,NM_032326,NM_001347,NM_022042,NM_000203,NM_001004356,NM_001131034,NR_134676,NR_033768,NM_001199021,NR_024569,NR_104331,NM_001377186,NR_033339,NM_001017405,NM_001317934,NM_001290079,NM_001174070,NM_006527,NM_001127266,NM_006342,NM_001163213,NM_012318,NM_001042424,NR_003004,NM_005663,NR_030641,NM_001141936,NM_178557,NM_181808,NM_001303143,NM_006454,NR_039964,NM_020972,NM_001193282,NM_002938,NM_001366318,NM_024309,NM_001145856,NM_001354761,NM_001410703,NR_015453,NM_001291978,NM_182982,NR_045414,NM_002111,NM_001042690,NM_001394155,NM_001297439,NM_001301071,NM_002337,NR_040045,NR_034136,NM_000683,NR_130740,NM_177998,NM_001297551,NM_017816,NM_001330625,NM_001382227,NM_016930,NR_126434,NR_037888,NR_145783,NR_125892,NR_125765,NM_002448,NR_125893,NM_018659,NM_018401,NR_126519,NM_147127,NM_153717,NM_001014809,NR_039608,NM_001364689,NM_001099433,NM_001415001,NR_037863,NM_001145853,NM_020416,NM_015274,NM_001272053,NR_134664,NM_138699,NR_147207,NM_005980,NM_203462,NM_018366,NM_001100590,NM_001113361,NR_033828,NM_153376,NM_152293,NM_025196,NR_027441,NM_020777,NR_039961,NM_001085382,NR_036238,NR_026892,NM_001134647,NR_172651,NM_001130083,NR_029511,NM_018986,NM_053044,NR_149125,NM_003501,NM_152544,NM_080819,NM_001014447,NR_187901,NM_018942,NM_001358418,NM_001256852,NM_001256854,NM_001256853,NM_001256855,NM_001256894,NM_001256857,NM_001256859,NM_001256860,NM_001256861,NM_001256862,NM_001256863,NM_001242327,NM_001242326,NM_001242328,NM_001242329,NM_001242330,NM_001242331,NM_001242332,NR_046416,NM_001256867,NR_027279;Tx_version=.,2,6,1,3,4,1,2,4,3,2,1,4,1,4,1,2,3,1,4,4,4,4,4,5,3,4,1,1,2,1,1,1,1,3,2,1,3,4,2,3,2,3,3,1,5,1,3,4,4,2,3,1,3,4,5,2,4,2,2,1,2,2,3,2,8,2,1,2,2,4,1,1,4,1,3,2,3,2,1,4,1,1,1,1,1,3,1,3,3,1,5,3,3,1,3,2,1,1,1,4,3,2,1,3,1,3,3,3,2,2,1,3,3,4,1,3,1,2,1,1,2,1,2,1,5,5,1,3,3,5,3,1,3,3,1,1,1,1,2,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1;Tx_start=.,53214,124382,206388,264463,331602,343945,419223,433776,492998,567668,570956,619361,646693,666224,668330,675617,699620,754230,778744,843064,926247,952674,981444,980831,1005413,1065265,1107426,1108984,1160719,1189570,1203907,1205232,1243227,1283678,1340995,1396719,1641613,1694457,1717678,1723247,1795019,1813205,1873119,1976362,1984449,1988110,2043721,2061053,2073644,2230075,2249158,2251803,2271323,2420681,2470832,2538373,2743374,2819896,2845570,2932293,2937272,2939662,2965297,3047865,3076407,3250885,3287617,3443694,3465032,3505338,3578595,3675319,3768111,3943486,4190452,4237268,4269427,4291977,4388828,4420694,4477847,4543857,4666052,4763486,4846163,4861391,4922534,5016312,5053206,5526295,5564165,5712927,5822490,5925001,5961101,6027925,6066703,6202459,6271576,6322307,6576915,6642411,6672454,6675801,6689174,6695604,6709427,6717900,6784453,6911192,7032280,7042575,7045098,7060621,7099150,7194264,7312176,7432011,7461754,7755816,7760440,7940727,7967053,8007027,8201016,8271480,8321902,8368008,8442503,8582118,8594491,8747121,8868773,9172134,9212382,9217130,9221877,9226621,9236110,9245604,9250355,9255103,9259849,9264597,9269344,9326890,9331636,9336383,9341128,9345873,9350618,9355363,9360107,9364854,9369599;Tx_end=.,88096,157952,249774,299263,378657,344041,467998,492945,533989,570084,578655,664571,648989,668065,675817,682940,763877,775637,819917,926104,952444,967357,987192,998352,1020686,1107352,1126763,1116952,1202632,1202750,1212379,1242918,1246795,1333925,1381837,1400230,1686040,1714046,1723050,1746898,1810594,1857883,1983919,1976487,2010701,1988204,2045691,2070816,2243848,2243848,2263836,2251883,2420372,2464729,2517584,2734300,2758063,2842823,2931789,2936552,2952805,2965133,3042487,3076351,3245687,3258340,3441640,3451213,3503209,3534149,3592712,3679582,3770253,3957155,4228656,4249950,4291881,4323510,4420785,4543775,4483427,4712665,4666150,4789101,4852554,4865663,4990398,5021185,5502716,5529528,5710286,5816032,5894813,5925055,6020158,6202276,6071889,6235663,6304992,6474341,6625089,6644456,6675608,6677774,6692246,6698897,6711592,6719391,6885891,7034841,7047958,7044728,7059679,7069791,7105103,7744554,7312251,7436657,7461845,7780655,7941588,7942023,8160540,8007108,8242830,8308825,8325692,8442450,8478282,8591750,8621479,8749448,8873565,9178456,9213975,9218723,9223470,9228214,9237772,9247197,9251948,9256696,9261442,9266190,9270937,9328483,9333229,9337976,9342721,9347466,9352211,9356956,9361700,9366447,9370796;Overlapped_tx_length=.,16544,33570,43386,34800,47055,96,48775,59169,40991,2416,7699,45210,2296,1841,7487,7323,64257,21407,41173,83040,26197,14683,5748,17521,15273,42087,19337,7968,41913,13180,8472,37686,3568,50247,40842,3511,44427,19589,5372,23651,15575,44678,110800,125,26252,94,1970,9763,170204,13773,14678,80,149049,44048,46752,195927,14689,22927,86219,4259,15533,25471,77190,28486,169280,7455,154023,7519,38177,28811,14117,4263,2142,13669,38204,12682,22454,31533,31957,123081,5580,168808,98,25615,6391,4272,67864,4873,449510,3233,146121,103105,72323,54,59057,174351,5186,33204,33416,152034,48174,2045,3154,1973,3072,3293,2165,1491,101438,123649,15678,2153,14581,9170,5953,550290,75,4646,91,24839,181148,1296,193487,81,41814,37345,3790,74442,35779,9632,26988,2327,4792,6322,1593,1593,1593,1593,1662,1593,1593,1593,1593,1593,1593,1593,1593,1593,1593,1593,1593,1593,1593,1593,1197;Overlapped_CDS_length=.,1709,1239,0,1758,1425,0,0,2772,2952,1158,0,2565,0,210,522,1683,729,0,405,3936,1515,2829,2106,1962,1515,894,0,0,996,0,0,1326,0,1191,2130,1347,1197,813,1089,2517,2427,2220,4098,0,1587,0,288,909,2703,1812,630,0,2664,1941,573,4548,1290,1857,2400,1443,0,2574,1737,0,9429,837,4344,1989,1827,1074,0,0,1389,0,1839,498,1140,2298,585,1008,0,0,0,0,0,912,0,411,1245,0,3927,2979,2061,0,4527,2496,138,0,2673,1344,3030,384,0,360,0,288,384,654,4188,2082,0,1668,1263,654,0,3480,0,1566,0,0,2445,0,1938,0,4011,1362,0,2103,2274,1092,1959,0,1047,1395,1593,1593,1593,1593,1662,1593,1593,1593,1593,1593,1593,1593,1593,1593,1593,1593,1593,1593,0,1593,0;Overlapped_CDS_percent=.,92,100,0,100,100,0,0,100,100,83,0,100,0,100,100,100,100,0,100,100,100,100,100,100,100,100,0,0,100,0,0,100,0,100,100,100,100,100,100,100,100,100,100,0,100,0,100,100,100,100,100,0,100,100,100,100,100,100,100,100,0,100,100,0,100,100,100,100,100,100,0,0,72,0,100,100,100,100,100,100,0,0,0,0,0,100,0,100,100,0,100,100,100,0,100,100,100,0,100,100,100,96,0,19,0,100,61,44,100,100,0,96,100,100,0,100,0,96,0,0,100,0,100,0,100,100,0,100,100,100,100,0,100,100,100,100,100,100,100,100,100,100,100,100,100,100,100,100,100,100,100,100,0,100,0;Frameshift=.,yes,no,.,no,no,.,.,no,no,no,.,no,.,no,no,no,no,.,no,no,no,no,no,no,no,no,.,.,no,.,.,no,.,no,no,no,no,no,no,no,no,no,no,.,no,.,no,no,no,no,no,.,no,no,no,no,no,no,no,no,.,no,no,.,no,no,no,no,no,no,.,.,no,.,no,no,no,no,no,no,.,.,.,.,.,no,.,no,no,.,no,no,no,.,no,no,no,.,no,no,no,no,.,no,.,no,no,no,no,no,.,no,no,no,.,no,.,no,.,.,no,.,no,.,no,no,.,no,no,no,no,.,no,no,no,no,no,no,no,no,no,no,no,no,no,no,no,no,no,no,no,no,.,no,.;Exon_count=.,8,6,2,4,4,1,3,3,13,1,3,22,3,4,9,10,12,3,4,28,11,23,3,14,7,10,3,4,8,4,6,9,2,9,14,2,5,8,4,16,18,14,22,1,11,1,4,3,26,6,6,1,13,16,8,21,6,13,16,12,4,18,16,4,67,3,18,15,10,8,3,3,1,4,6,5,10,8,6,11,4,6,1,3,4,2,3,4,12,4,22,21,14,1,12,21,2,4,8,9,19,3,2,1,3,2,2,1,9,14,4,1,2,4,2,27,1,1,1,2,18,1,21,1,18,9,4,18,11,3,11,3,2,7,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1;Location=.,intron2-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd;Location2=.,CDS-3'UTR,5'UTR-3'UTR,UTR,5'UTR-3'UTR,5'UTR-3'UTR,UTR,UTR,5'UTR-3'UTR,5'UTR-3'UTR,5'UTR-3'UTR,UTR,5'UTR-3'UTR,UTR,5'UTR-3'UTR,5'UTR-3'UTR,5'UTR-3'UTR,5'UTR-3'UTR,UTR,5'UTR-3'UTR,5'UTR-3'UTR,5'UTR-3'UTR,5'UTR-3'UTR,5'UTR-3'UTR,5'UTR-3'UTR,5'UTR-3'UTR,5'UTR-3'UTR,UTR,UTR,5'UTR-3'UTR,UTR,UTR,5'UTR-3'UTR,UTR,5'UTR-3'UTR,5'UTR-3'UTR,5'UTR-3'UTR,5'UTR-3'UTR,5'UTR-3'UTR,5'UTR-3'UTR,5'UTR-3'UTR,5'UTR-3'UTR,5'UTR-3'UTR,5'UTR-3'UTR,UTR,5'UTR-3'UTR,UTR,5'UTR-3'UTR,5'UTR-3'UTR,5'UTR-3'UTR,5'UTR-3'UTR,5'UTR-3'UTR,UTR,5'UTR-3'UTR,5'UTR-3'UTR,5'UTR-3'UTR,5'UTR-3'UTR,5'UTR-3'UTR,5'UTR-3'UTR,5'UTR-3'UTR,5'UTR-3'UTR,UTR,5'UTR-3'UTR,5'UTR-3'UTR,UTR,5'UTR-3'UTR,5'UTR-3'UTR,5'UTR-3'UTR,5'UTR-3'UTR,5'UTR-3'UTR,5'UTR-3'UTR,UTR,UTR,5'UTR-3'UTR,UTR,5'UTR-3'UTR,5'UTR-3'UTR,5'UTR-3'UTR,5'UTR-3'UTR,5'UTR-3'UTR,5'UTR-3'UTR,UTR,UTR,UTR,UTR,UTR,5'UTR-3'UTR,UTR,5'UTR-3'UTR,5'UTR-3'UTR,UTR,5'UTR-3'UTR,5'UTR-3'UTR,5'UTR-3'UTR,UTR,5'UTR-3'UTR,5'UTR-3'UTR,5'UTR-3'UTR,UTR,5'UTR-3'UTR,5'UTR-3'UTR,5'UTR-3'UTR,5'UTR-3'UTR,UTR,5'UTR-3'UTR,UTR,5'UTR-3'UTR,5'UTR-3'UTR,5'UTR-3'UTR,5'UTR-3'UTR,5'UTR-3'UTR,UTR,5'UTR-3'UTR,5'UTR-3'UTR,5'UTR-3'UTR,UTR,5'UTR-3'UTR,UTR,5'UTR-3'UTR,UTR,UTR,5'UTR-3'UTR,UTR,5'UTR-3'UTR,UTR,5'UTR-3'UTR,5'UTR-3'UTR,UTR,5'UTR-3'UTR,5'UTR-3'UTR,5'UTR-3'UTR,5'UTR-3'UTR,UTR,5'UTR-3'UTR,5'UTR-3'UTR,5'UTR-3'UTR,5'UTR-3'UTR,5'UTR-3'UTR,5'UTR-3'UTR,5'UTR-3'UTR,5'UTR-3'UTR,5'UTR-3'UTR,5'UTR-3'UTR,5'UTR-3'UTR,5'UTR-3'UTR,5'UTR-3'UTR,5'UTR-3'UTR,5'UTR-3'UTR,5'UTR-3'UTR,5'UTR-3'UTR,5'UTR-3'UTR,5'UTR-3'UTR,5'UTR-3'UTR,UTR,5'UTR-3'UTR,UTR;Dist_nearest_SS=.,12103,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.;Nearest_SS_type=.,5',.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.;Intersect_start=.,71552,124382,206388,264463,331602,343945,419223,433776,492998,567668,570956,619361,646693,666224,668330,675617,699620,754230,778744,843064,926247,952674,981444,980831,1005413,1065265,1107426,1108984,1160719,1189570,1203907,1205232,1243227,1283678,1340995,1396719,1641613,1694457,1717678,1723247,1795019,1813205,1873119,1976362,1984449,1988110,2043721,2061053,2073644,2230075,2249158,2251803,2271323,2420681,2470832,2538373,2743374,2819896,2845570,2932293,2937272,2939662,2965297,3047865,3076407,3250885,3287617,3443694,3465032,3505338,3578595,3675319,3768111,3943486,4190452,4237268,4269427,4291977,4388828,4420694,4477847,4543857,4666052,4763486,4846163,4861391,4922534,5016312,5053206,5526295,5564165,5712927,5822490,5925001,5961101,6027925,6066703,6202459,6271576,6322307,6576915,6642411,6672454,6675801,6689174,6695604,6709427,6717900,6784453,6911192,7032280,7042575,7045098,7060621,7099150,7194264,7312176,7432011,7461754,7755816,7760440,7940727,7967053,8007027,8201016,8271480,8321902,8368008,8442503,8582118,8594491,8747121,8868773,9172134,9212382,9217130,9221877,9226621,9236110,9245604,9250355,9255103,9259849,9264597,9269344,9326890,9331636,9336383,9341128,9345873,9350618,9355363,9360107,9364854,9369599;Intersect_end=.,88096,157952,249774,299263,378657,344041,467998,492945,533989,570084,578655,664571,648989,668065,675817,682940,763877,775637,819917,926104,952444,967357,987192,998352,1020686,1107352,1126763,1116952,1202632,1202750,1212379,1242918,1246795,1333925,1381837,1400230,1686040,1714046,1723050,1746898,1810594,1857883,1983919,1976487,2010701,1988204,2045691,2070816,2243848,2243848,2263836,2251883,2420372,2464729,2517584,2734300,2758063,2842823,2931789,2936552,2952805,2965133,3042487,3076351,3245687,3258340,3441640,3451213,3503209,3534149,3592712,3679582,3770253,3957155,4228656,4249950,4291881,4323510,4420785,4543775,4483427,4712665,4666150,4789101,4852554,4865663,4990398,5021185,5502716,5529528,5710286,5816032,5894813,5925055,6020158,6202276,6071889,6235663,6304992,6474341,6625089,6644456,6675608,6677774,6692246,6698897,6711592,6719391,6885891,7034841,7047958,7044728,7059679,7069791,7105103,7744554,7312251,7436657,7461845,7780655,7941588,7942023,8160540,8007108,8242830,8308825,8325692,8442450,8478282,8591750,8621479,8749448,8873565,9178456,9213975,9218723,9223470,9228214,9237772,9247197,9251948,9256696,9261442,9266190,9270937,9328483,9333229,9337976,9342721,9347466,9352211,9356956,9361700,9366447,9370796;RE_gene=ACACA_(morbid/RE=mTL_miRNA)|ACTC1_(morbid/RE=mTL_miRNA)|ACVR1_(morbid/RE=mTL_miRNA)|AGO2_(morbid/RE=mTL_miRNA)|AKT1_(morbid/RE=mTL_miRNA)|ANTXR2_(morbid/RE=mTL_miRNA)|ARF1_(morbid/RE=mTL_miRNA)|ARHGDIA_(morbid/RE=mTL_miRNA)|ARL6IP1_(morbid/RE=mTL_miRNA)|ARPC1B_(morbid/RE=mTL_miRNA)|ATXN2_(morbid/RE=mTL_miRNA)|CAD_(morbid/RE=mTL_miRNA)|CALM2_(morbid/RE=mTL_miRNA)|CASK_(morbid/RE=mTL_miRNA)|CCNF_(morbid/RE=mTL_miRNA)|CELF2_(morbid/RE=mTL_miRNA)|CEP55_(morbid/RE=mTL_miRNA)|CIITA_(morbid/RE=mTL_miRNA)|CNTNAP2_(morbid/RE=mTL_miRNA)|COL18A1_(morbid/RE=mTL_miRNA)|COL1A1_(HI=3/morbid/RE=mTL_miRNA)|CREBBP_(HI=3/morbid/RE=mTL_miRNA)|CTCF_(HI=3/morbid/RE=mTL_miRNA)|DAAM2_(morbid/RE=mTL_miRNA)|DDR2_(morbid/RE=mTL_miRNA)|DDX3X_(HI=3/morbid/RE=mTL_miRNA)|EDEM3_(morbid/RE=mTL_miRNA)|EGLN1_(morbid/RE=mTL_miRNA)|ELOVL5_(morbid/RE=mTL_miRNA)|ESCO2_(morbid/RE=mTL_miRNA)|FBXO22_(morbid/RE=mTL_miRNA)|FICD_(morbid/RE=mTL_miRNA)|FLCN_(HI=3/morbid/RE=mTL_miRNA)|FLVCR1_(morbid/RE=mTL_miRNA)|FOXC1_(HI=3/morbid/RE=mTL_miRNA)|FOXP2_(HI=3/morbid/RE=mTL_miRNA)|G6PD_(morbid/RE=mTL_miRNA)|GABRB2_(morbid/RE=mTL_miRNA)|GATA6_(HI=3/morbid/RE=mTL_miRNA)|GLI2_(HI=3/morbid/RE=mTL_miRNA)|GLUL_(morbid/RE=mTL_miRNA)|GNAS_(HI=3/morbid/RE=mTL_miRNA)|HERC2_(morbid/RE=mTL_miRNA)|HFE_(morbid/RE=mTL_miRNA)|IGF1R_(HI=3/morbid/RE=mTL_miRNA)|INF2_(morbid/RE=mTL_miRNA)|ITM2B_(morbid/RE=mTL_miRNA)|KCNJ6_(morbid/RE=mTL_miRNA)|LAMA4_(morbid/RE=mTL_miRNA)|LMNB2_(morbid/RE=mTL_miRNA)...;P_gain_phen=Retinitis_pigmentosa_40|Retinitis_pigmentosa|Retinitis_pigmentosa_40,.,.,.,.,.,.,.,.,.,.,.,Retinitis_pigmentosa_40|Retinitis_pigmentosa|Retinitis_pigmentosa_40,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.;P_gain_hpo=HP:0000547,.,.,.,.,.,.,.,.,.,.,.,HP:0000547,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.;P_gain_source=CLN:28147|CLN:801370|dbVar:nssv15124412|dbVar:nssv15130095|dbVar:nssv15132150|dbVar:nssv15132411|dbVar:nssv15132589|dbVar:nssv15133497|dbVar:nssv15153559|dbVar:nssv15161020|dbVar:nssv16255833|dbVar:nssv16867404|dbVar:nssv17172169|dbVar:nssv17973849|dbVar:nssv18330201,.,.,.,.,.,.,.,.,.,.,.,CLN:28147|CLN:801370|dbVar:nssv15161020,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,dbVar:nssv17973849,dbVar:nssv17172169,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.;P_gain_coord=4:127234-8667610|4:1420949-1836794|4:1737489-1808653|4:1770487-2303110|4:374558-745174|4:5567009-5587839|4:5785270-5803831|4:614356-2959936|4:619584-619584|4:619584-619655|4:619590-619662|4:72448-3848881|4:72448-5608810|4:85041-4597934|4:963689-2913553,.,.,.,.,.,.,.,.,.,.,.,4:619584-619584|4:619584-619655|4:619590-619662,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,4:5567009-5587839,4:5785270-5803831,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.;P_loss_phen=4p16.3_terminal_(Wolf-Hirschhorn_syndrome)_region|?Cataract_41,_116400_(3)_AD|Deafness,_AD_6|14|38,_600965_(3)_AD|Wolfram_syndrome_1,_222300_(3)_AR|Wolfram-like_syndrome,_AD,_614296_(3)_AD|Diabetes_mellitus,_noninsulin-dependent,_association_with,_125853_(3)_AD|?Spermatogenic_failure_62,_619673_(3)_AR|Recombination_rate_QTL_1,_612042_(3)|?Weyers_acrofacial_dysostosis,_193530_(3)_AD|Ellis-van_Creveld_syndrome,_225500_(3)_AR|Achondroplasia,_100800_(3)_AD|Bladder_cancer,_somatic,_109800_(3)|CATSHL_syndrome,_610474_(3)_AD,AR|Cervical_cancer,_somatic,_603956_(3)|Colorectal_cancer,_somatic,_114500_(3)|Crouzon_syndrome_with_acanthosis_nigricans,_612247_(3)_AD|Hypochondroplasia,_146000_(3)_AD|LADD_syndrome_2,_620192_(3)_AD|Muenke_syndrome,_602849_(3)_AD|Nevus,_epidermal,_somatic,_162900_(3)|SADDAN,_616482_(3)_AD|Spermatocytic_seminoma,_somatic,_273300_(3)|Thanatophoric_dysplasia,_type_I,_187600_(3)_AD|Thanatophoric_dysplasia,_type_II,_187601_(3)_AD|Cherubism,_118400_(3)_AD|Congenital_disorder_of_glycosylation_type_1EE_with_or_without_immunodeficiency,_621140_(3)_AR|Developmental_and_epileptic_encephalopathy_63,_617976_(3)_AR|Ectodermal_dysplasia_3,_Witkop_type,_189500_(3)_AD|Orofacial_cleft_5,_608874_(3)_AD|Tooth_agenesis,_selective,_1,_with_or_without_orofacial_cleft,_106600_(3)_AD|Ellis-van_Creveld_syndrome,_225500_(3)_AR|Weyers_acrofacial_dysostosis,_193530_(3)_AD|Ellis-van_Creveld_syndrome|Curry-Hall_syndrome|Fetal_akinesia_deformation_sequence_3,_618389_(3)_AR|Myasthenic_syndrome,_congenital,_10,_254300_(3)_AR|Fetal_akinesia_deformation_sequence_1|Congenital_myasthenic_syndrome_10|Fetal_akinesia_deformation_sequence_3|Huntington_disease,_143100_(3)_AD|Lopes-Maciel-Rodan_syndrome,_617435_(3)_AR|Hurler_syndrome|Hypotonia,_ataxia,_developmental_delay,_and_tooth_enamel_defect_syndrome,_617915_(3)_AD|Mucopolysaccharidosis_Ih,_607014_(3)_AR|Mucopolysaccharidosis_Ih|s,_607015_(3)_AR|Mucopolysaccharidosis_Is,_607016_(3)_AR|Mucopolysaccharidosis_type_1|Myopia_23,_AR,_615431_(3)_AR|Neurodegeneration,_childhood-onset,_with_multisystem_involvement_due_to_mitochondrial_dysfunction,_620089_(3)_AR|Neurodevelopmental_disorder_with_or_without_hypotonia,_seizures,_and_cerebellar_atrophy,_616917_(3)_AR|Blood_group,_EMM_system,_619812_(3)_AR|Night_blindness,_congenital_stationary,_AD_2,_163500_(3)_AD|Retinitis_pigmentosa-40,_613801_(3)_AR|Oculoauricular_syndrome,_612109_(3)_AR|Rauch-Steindl_syndrome,_619695_(3)_AD|UV-sensitive_syndrome_3,_614640_(3)_AR,.,.,.,.,.,.,.,.,Neurodevelopmental_disorder_with_or_without_hypotonia,_seizures,_and_cerebellar_atrophy,_616917_(3)_AR|Blood_group,_EMM_system,_619812_(3)_AR,.,.,Night_blindness,_congenital_stationary,_AD_2,_163500_(3)_AD|Retinitis_pigmentosa-40,_613801_(3)_AR,.,.,.,.,.,.,Developmental_and_epileptic_encephalopathy_63,_617976_(3)_AR,.,.,.,.,Hurler_syndrome|Mucopolysaccharidosis_Ih,_607014_(3)_AR|Mucopolysaccharidosis_Ih|s,_607015_(3)_AR|Mucopolysaccharidosis_Is,_607016_(3)_AR|Mucopolysaccharidosis_type_1,.,?Spermatogenic_failure_62,_619673_(3)_AR|Recombination_rate_QTL_1,_612042_(3),.,.,.,.,.,.,.,.,UV-sensitive_syndrome_3,_614640_(3)_AR,.,.,.,.,.,Achondroplasia,_100800_(3)_AD|Bladder_cancer,_somatic,_109800_(3)|CATSHL_syndrome,_610474_(3)_AD,AR|Cervical_cancer,_somatic,_603956_(3)|Colorectal_cancer,_somatic,_114500_(3)|Crouzon_syndrome_with_acanthosis_nigricans,_612247_(3)_AD|Hypochondroplasia,_146000_(3)_AD|LADD_syndrome_2,_620192_(3)_AD|Muenke_syndrome,_602849_(3)_AD|Nevus,_epidermal,_somatic,_162900_(3)|SADDAN,_616482_(3)_AD|Spermatocytic_seminoma,_somatic,_273300_(3)|Thanatophoric_dysplasia,_type_I,_187600_(3)_AD|Thanatophoric_dysplasia,_type_II,_187601_(3)_AD,Neurodegeneration,_childhood-onset,_with_multisystem_involvement_due_to_mitochondrial_dysfunction,_620089_(3)_AR,Rauch-Steindl_syndrome,_619695_(3)_AD,.,.,.,.,.,.,.,.,.,.,.,.,.,.,Cherubism,_118400_(3)_AD,.,.,.,.,.,.,Huntington_disease,_143100_(3)_AD|Lopes-Maciel-Rodan_syndrome,_617435_(3)_AR,.,.,.,Fetal_akinesia_deformation_sequence_3,_618389_(3)_AR|Myasthenic_syndrome,_congenital,_10,_254300_(3)_AR|Fetal_akinesia_deformation_sequence_1|Congenital_myasthenic_syndrome_10|Fetal_akinesia_deformation_sequence_3,Myopia_23,_AR,_615431_(3)_AR,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,Ectodermal_dysplasia_3,_Witkop_type,_189500_(3)_AD|Orofacial_cleft_5,_608874_(3)_AD|Tooth_agenesis,_selective,_1,_with_or_without_orofacial_cleft,_106600_(3)_AD,.,.,.,.,.,?Weyers_acrofacial_dysostosis,_193530_(3)_AD|Ellis-van_Creveld_syndrome,_225500_(3)_AR|Ellis-van_Creveld_syndrome|Curry-Hall_syndrome,.,.,.,.,.,.,?Cataract_41,_116400_(3)_AD|Deafness,_AD_6|14|38,_600965_(3)_AD|Wolfram_syndrome_1,_222300_(3)_AR|Wolfram-like_syndrome,_AD,_614296_(3)_AD|Diabetes_mellitus,_noninsulin-dependent,_association_with,_125853_(3)_AD,.,Congenital_disorder_of_glycosylation_type_1EE_with_or_without_immunodeficiency,_621140_(3)_AR,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,Oculoauricular_syndrome,_612109_(3)_AR,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.;P_loss_hpo=HP:0001989,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,HP:0001989,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.;P_loss_source=CLN:1313135|CLN:2672009|CLN:2834164|CLN:3496433|CLN:961843|HI3:ISCA-37429|HI3:MSX1|HI3:NSD2|dbVar:nssv15119851|dbVar:nssv15121023|dbVar:nssv15121032|dbVar:nssv15121033|dbVar:nssv15121034|dbVar:nssv15121217|dbVar:nssv15121218|dbVar:nssv15121687|dbVar:nssv15122678|dbVar:nssv15123516|dbVar:nssv15124520|dbVar:nssv15127349|dbVar:nssv15130945|dbVar:nssv15131476|dbVar:nssv15131910|dbVar:nssv15132407|dbVar:nssv15132408|dbVar:nssv15132580|nssv15140019|dbVar:nssv15132953|dbVar:nssv15133489|dbVar:nssv15133490|dbVar:nssv15133634|dbVar:nssv15134794|dbVar:nssv15134826|dbVar:nssv15135086|dbVar:nssv15135107|dbVar:nssv15138367|dbVar:nssv15138802|dbVar:nssv15138941|dbVar:nssv15139309|dbVar:nssv15144315|dbVar:nssv15147286|dbVar:nssv15153560|dbVar:nssv15153562|dbVar:nssv15605891|dbVar:nssv15606061|dbVar:nssv15770186|dbVar:nssv15770321|dbVar:nssv16211870|dbVar:nssv16212102|dbVar:nssv16213046|dbVar:nssv16213271|dbVar:nssv16213451|dbVar:nssv16213572|dbVar:nssv16213637|dbVar:nssv16213802|dbVar:nssv16214176|dbVar:nssv16214333|dbVar:nssv16216714|dbVar:nssv16252200|dbVar:nssv16253953|dbVar:nssv16254938|dbVar:nssv16297119|dbVar:nssv16297131|dbVar:nssv16867405|dbVar:nssv17171362|dbVar:nssv17171376|dbVar:nssv17171391|dbVar:nssv17171923|dbVar:nssv17172168|dbVar:nssv17172572|dbVar:nssv17172573|dbVar:nssv17172574|dbVar:nssv17172955|dbVar:nssv17173143|dbVar:nssv17173159|dbVar:nssv17683620|dbVar:nssv17970729|dbVar:nssv17970732|dbVar:nssv17971217|dbVar:nssv17971266|dbVar:nssv17971361|dbVar:nssv17971686|dbVar:nssv17971734|dbVar:nssv17971799|dbVar:nssv17971904|dbVar:nssv17972056|dbVar:nssv17972166|dbVar:nssv17972432|dbVar:nssv17973718|nssv17974037|dbVar:nssv17973748|dbVar:nssv17974578|dbVar:nssv17975024|dbVar:nssv17976233|dbVar:nssv17976464|dbVar:nssv17976477|dbVar:nssv17976550|dbVar:nssv18326580|dbVar:nssv18786244|dbVar:nssv18786333|dbVar:nssv18787193|dbVar:nssv18788241|dbVar:nssv18788242|dbVar:nssv18788927|dbVar:nssv18788928|dbVar:nssv18790018|dbVar:nssv18790019|dbVar:nssv18790020|dbVar:nssv18790021|dbVar:nssv18790022|dbVar:nssv18790117|dbVar:nssv18790118|dbVar:nssv18790119|dbVar:nssv18790120|dbVar:nssv18790121|dbVar:nssv18790180|dbVar:nssv18790633|dbVar:nssv18791534|dbVar:nssv18791535|dbVar:nssv18791536|dbVar:nssv18791537|dbVar:nssv18791538|dbVar:nssv18791542|dbVar:nssv18830727|morbid:CPLX1|morbid:CTBP1|morbid:DOK7|morbid:EVC|morbid:EVC2|morbid:FGFR3|morbid:HMX1|morbid:HTRA3|morbid:HTT|morbid:IDUA|morbid:LETM1|morbid:LRPAP1|morbid:MAN2B2|morbid:MSX1|morbid:NSD2|morbid:PDE6B|morbid:PIGG|morbid:RNF212|morbid:SH3BP2|morbid:UVSSA|morbid:WFS1,.,.,.,.,.,.,.,.,dbVar:nssv17683620|dbVar:nssv17974578|dbVar:nssv17976464|dbVar:nssv17976477|dbVar:nssv18791534|dbVar:nssv18791536|dbVar:nssv18791537|dbVar:nssv18791538|morbid:PIGG,.,.,dbVar:nssv16213572|dbVar:nssv16213637|dbVar:nssv17171376|dbVar:nssv17171923|dbVar:nssv18788927|dbVar:nssv18788928|morbid:PDE6B,dbVar:nssv17171376,.,.,.,.,.,morbid:CPLX1,.,.,.,.,CLN:2672009|CLN:961843|dbVar:nssv16216714|dbVar:nssv18830727|morbid:IDUA,.,morbid:RNF212,.,.,.,.,.,.,.,.,morbid:UVSSA,.,.,.,.,.,morbid:FGFR3,morbid:LETM1,HI3:NSD2|morbid:NSD2,.,.,.,.,.,.,.,.,.,.,.,.,.,.,morbid:SH3BP2,.,.,.,.,.,.,morbid:HTT,.,.,.,CLN:2834164|CLN:3496433|dbVar:nssv15130945|dbVar:nssv15131476|dbVar:nssv15770186|dbVar:nssv16213451|dbVar:nssv16214333|dbVar:nssv17971686|dbVar:nssv17972166|dbVar:nssv17976550|dbVar:nssv18786333|dbVar:nssv18790180|morbid:DOK7,morbid:LRPAP1,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,HI3:MSX1|morbid:MSX1,.,.,.,.,dbVar:nssv15770321|dbVar:nssv16213046|dbVar:nssv16213271|dbVar:nssv16297119|dbVar:nssv17172955|dbVar:nssv17971266|dbVar:nssv17971361|dbVar:nssv17972056|dbVar:nssv18790018|dbVar:nssv18790020|dbVar:nssv18790021|dbVar:nssv18790022,CLN:1313135|dbVar:nssv15144315|dbVar:nssv16211870|dbVar:nssv16297131|dbVar:nssv17172168|dbVar:nssv17172572|dbVar:nssv17172573|dbVar:nssv17172574|dbVar:nssv17971734|dbVar:nssv17973718|nssv17974037|dbVar:nssv17975024|dbVar:nssv18786244|dbVar:nssv18790117|dbVar:nssv18790118|dbVar:nssv18790119|dbVar:nssv18790120|morbid:EVC,.,.,.,.,.,.,dbVar:nssv18790633|morbid:WFS1,.,morbid:MAN2B2,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,morbid:HTRA3,.,.,.,.,.,.,morbid:HMX1,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.;P_loss_coord=4:1087097-1107352|4:1190912-2255904|4:1205233-1244143|4:1228529-2862002|4:129754-9371067|4:1305803-2460571|4:1340996-1381837|4:1619776-2181192|4:1701019-1975031|4:1784695-1919793|4:1795020-1810594|4:1813206-1857883|4:1827029-1860753|4:1873121-1983919|4:1902353-1950545|4:1941634-3879802|4:1966267-5913899|4:2009467-3080412|4:2200252-5710240|4:2364202-5447465|4:2820541-2842823|4:2909441-6871516|4:3076408-3245687|4:3085428-7591673|4:331569-2010962|4:3465094-3495238|4:3465104-3465298|4:3475114-3491543|4:3478201-3482971|4:3478271-3491403|4:3486271-3496209|4:3487104-3487370|4:3487247-3495248|4:3487257-3487395|4:3487257-3495238|4:3494467-3495228|4:3494950-3495048|4:3495083-3495158|4:3505339-3534149|4:3776785-7361544|4:388345-3872380|4:4859066-4864603|4:4861392-4865663|4:4861393-4865663|4:4861628-6304195|4:492999-533989|4:493126-2065854|4:493126-663896|4:493126-998181|4:493969-499930|4:494166-494410|4:499508-502759|4:501175-533158|4:502599-509994|4:507006-2214932|4:509743-533158|4:512203-518547|4:520809-1020391|4:524206-527790|4:5563147-5711294|4:5564166-5711275|4:5564566-5578191|4:5564566-5586587|4:5564566-5759862|4:5564576-5567096|4:5565511-5811251|4:5570162-5570377|4:5576403-5576509|4:5617140-5812774|4:5630277-5633769|4:5630336-5635926|4:5630338-5635927|4:5636440-5710337|4:5642222-5642585|4:5682978-5735172|4:5690875-5691080|4:5690875-5696238|4:5696053-5696238|4:5710004-5750043|4:5711925-5817031|4:5712928-5816032|4:5713109-5714221|4:5713159-5713318|4:5731025-5759862|4:5733143-5735172|4:5749726-5755670|4:5754554-5755670|4:5754554-5758099|4:5754554-5785501|4:5754599-5758602|4:5785270-5812774|4:5795340-5795484|4:5795341-5795483|4:5798730-5798979|4:5798740-5798969|4:5803668-5806578|4:5809919-5811348|4:619417-619883|4:6271577-6304992|4:6279184-6279434|4:629670-670728|4:646966-664571|4:647642-648677|4:651220-652826|4:652722-656427|4:652742-656407|4:6576916-6625089|4:660321-661795|4:664193-671649|4:72448-2110334|4:72448-2327204|4:72448-2691306|4:72448-3208040|4:72448-3563382|4:72448-3725774|4:72448-3787112|4:72448-4360445|4:72448-4889835|4:72448-5036718|4:72448-5214111|4:72448-5346537|4:72448-6245152|4:72448-7831152|4:75743-8672411|4:778745-819917|4:78471-3364946|4:8271481-8308825|4:85041-1921232|4:85041-2010262|4:85041-4407509|4:85041-7065426|4:85041-7845343|4:8613755-8873340|4:8868774-8873565|4:980776-981040|4:980776-981747|4:990308-992083|4:990309-992082|4:993498-998345|4:994391-998355|4:996510-998192|4:996511-998191|4:996511-998355,.,.,.,.,.,.,.,.,4:492999-533989|4:493969-499930|4:494166-494410|4:499508-502759|4:501175-533158|4:502599-509994|4:509743-533158|4:512203-518547|4:524206-527790,.,.,4:619417-619883|4:646966-664571|4:647642-648677|4:651220-652826|4:652722-656427|4:652742-656407|4:660321-661795,4:647642-648677,.,.,.,.,.,4:778745-819917,.,.,.,.,4:990308-992083|4:990309-992082|4:993498-998345|4:996510-998192|4:996511-998191,.,4:1087097-1107352,.,.,.,.,.,.,.,.,4:1340996-1381837,.,.,.,.,.,4:1795020-1810594,4:1813206-1857883,4:1873121-1983919|4:1902353-1950545,.,.,.,.,.,.,.,.,.,.,.,.,.,.,4:2820541-2842823,.,.,.,.,.,.,4:3076408-3245687,.,.,.,4:3465094-3495238|4:3465104-3465298|4:3475114-3491543|4:3478201-3482971|4:3478271-3491403|4:3486271-3496209|4:3487104-3487370|4:3487247-3495248|4:3487257-3487395|4:3487257-3495238|4:3494467-3495228|4:3494950-3495048|4:3495083-3495158,4:3505339-3534149,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,4:4861392-4865663|4:4861393-4865663,.,.,.,.,4:5564566-5578191|4:5564566-5586587|4:5564576-5567096|4:5570162-5570377|4:5576403-5576509|4:5630277-5633769|4:5630336-5635926|4:5630338-5635927|4:5642222-5642585|4:5690875-5691080|4:5690875-5696238|4:5696053-5696238,4:5712928-5816032|4:5713109-5714221|4:5713159-5713318|4:5731025-5759862|4:5733143-5735172|4:5749726-5755670|4:5754554-5755670|4:5754554-5758099|4:5754554-5785501|4:5754599-5758602|4:5785270-5812774|4:5795340-5795484|4:5795341-5795483|4:5798730-5798979|4:5798740-5798969|4:5803668-5806578|4:5809919-5811348,.,.,.,.,.,.,4:6271577-6304992|4:6279184-6279434,.,4:6576916-6625089,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,4:8271481-8308825,.,.,.,.,.,.,4:8868774-8873565,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.;po_P_gain_source=dbVar:nssv15165478|dbVar:nssv15148693|dbVar:nssv15149137|dbVar:nssv15125120|dbVar:nssv15134956|dbVar:nssv15136789|dbVar:nssv15148117|dbVar:nssv15165480|dbVar:nssv15164282|dbVar:nssv15164281|dbVar:nssv16215300|dbVar:nssv15145847|dbVar:nssv15132087|dbVar:nssv15132302|dbVar:nssv16254944|dbVar:nssv16207938|dbVar:nssv18830986|dbVar:nssv15150724|dbVar:nssv15777261|dbVar:nssv15151365|nssv18326348|dbVar:nssv15150634|dbVar:nssv15142189|dbVar:nssv15149870|nssv15151360|dbVar:nssv17649922|dbVar:nssv15147407|dbVar:nssv15146379|dbVar:nssv15146614|dbVar:nssv15148043|dbVar:nssv15146983|dbVar:nssv15146984|dbVar:nssv17976755|dbVar:nssv18841857|dbVar:nssv18841859|dbVar:nssv15164312|dbVar:nssv18841858|dbVar:nssv15149115;po_P_gain_coord=4:11526-191028879|4:12441-190904441|4:12441-49064044|4:33575-6632513|4:36425-1583294|4:36425-4098729|4:36425-47493612|4:49451-190915650|4:49451-190963766|4:49451-46339070|4:49451-49620898|4:51414-17799819|4:51414-3776843|4:51414-8224525|4:68346-2503033|4:68346-27423424|4:68346-34512694|4:68346-3713599|4:68346-4051616|4:68346-49089361|4:68346-66440622|4:68346-8731855|4:68347-190957473|4:69672-29702595|4:72448-21024037|4:72448-33132242|4:72448-39478764|4:78471-15627196|4:85041-22451641|4:85041-38701987|4:114785-47569569|4:507006-49064194|4:507006-57939396|4:1356925-49659859|4:2906395-42965249|4:6447049-20490737;po_P_gain_perc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imbed_short_stature|Levy-Hollister_syndrome|Lower_limb_undergrowth|MSX1-related_disorder|Malignant_tumor_of_testis|Malignant_tumor_of_urinary_bladder|Meniere_disease|Mucopolysaccharidosis|Mucopolysaccharidosis,_MPS-I-H/S|Mucopolysaccharidosis,_MPS-I-S|Mucopolysaccharidosis,_MPS-IV-A|Mucopolysaccharidosis_type_1|Muenke_syndrome|Multiple_myeloma|Myopia_23,_autosomal_recessive|NSD2-related_disorder|Narrow_chest|Neurodevelopmental_delay|Nonsyndromic_genetic_hearing_loss|Optic_atrophy|PDE6B-related_disorder|PIGG-related_disorder|Rare_genetic_deafness|Rauch-Steindl_syndrome|Retinal_dystrophy|Retinitis_pigmentosa|Retinitis_pigmentosa_40|Rett_syndrome|SH3BP2-related_disorder|Saethre-Chotzen_syndrome|Seborrheic_keratosis|See_cases|Seizure|Severe_achondroplasia-developmental_delay-acanthosis_nigricans_syndrome|Short-rib_thoracic_dysplasia_6_with_or_without_polydactyly|Short_ribs|Short_stature|Skeletal_dysplasia|Skeletal_dysplasia_with_acanthosis_nigricans|Small_for_gestational_age|Smith-Magenis_Syndrome-like|Spermatocytic_seminoma|Squamous_cell_lung_carcinoma|Syndromic_intellectual_disability|Thanatophoric_dysplasia|Thanatophoric_dysplasia,_type_2|Thanatophoric_dysplasia_type_1|Tooth_agenesis,_selective,_1|Type_2_diabetes_mellitus|Type_IV_short_rib_polydactyly_syndrome|Tyrosinase-positive_oculocutaneous_albinism|Unilateral_renal_agenesis|Upper_limb_undergrowth|WFS1-Related_Spectrum_Disorders|WFS1-related_disorder|WFS1-spectrum_disorder|Wolf-Hirschhorn_like_syndrome|Wolfram-like_syndrome|Wolfram_syndrome|Wolfram_syndrome_1|not_specified,.,.,.,.,.,.,.,.,BLOOD_GROUP,_EMM_SYSTEM|Emm-null_phenotype|Inborn_genetic_diseases|Intellectual_disability,_autosomal_recessive_53|PIGG-related_disorder,.,.,Autosomal_recessive_retinitis_pigmentosa|Cone-rod_dystrophy|Congenital_Stationary_Night_Blindness,_Dominant|Congenital_stationary_night_blindness_autosomal_dominant_2|Leber_congenital_amaurosis|PDE6B-related_disorder|Retinal_dystrophy|Retinitis_pigmentosa|Retinitis_pigmentosa_40|See_cases|Tyrosinase-positive_oculocutaneous_albinism,Autosomal_recessive_retinitis_pigmentosa|Congenital_stationary_night_blindness_autosomal_dominant_2|Leber_congenital_amaurosis|Retinal_dystrophy|Retinitis_pigmentosa|Retinitis_pigmentosa_40|See_cases,.,.,.,.,.,Developmental_and_epileptic_encephalopathy,_63,.,.,.,Hurler_syndrome|IDUA-related_disorder|Interstitial_pneumonitis|Mucopolysaccharidosis|Mucopolysaccharidosis,_MPS-I-H/S|Mucopolysaccharidosis,_MPS-I-S|Mucopolysaccharidosis_type_1|See_cases,Familial_hypokalemia-hypomagnesemia|Hurler_syndrome|IDUA-related_core_myopathy|IDUA-related_disorder|Inborn_genetic_diseases|Interstitial_pneumonitis|Mucopolysaccharidosis|Mucopolysaccharidosis,_MPS-I-H/S|Mucopolysaccharidosis,_MPS-I-S|Mucopolysaccharidosis,_MPS-IV-A|Mucopolysaccharidosis_type_1|See_cases,.,.,.,.,.,.,Hypotonia,_ataxia,_developmental_delay,_and_tooth_enamel_defect_syndrome|Inborn_genetic_diseases,Hypotonia,_ataxia,_developmental_delay,_and_tooth_enamel_defect_syndrome|Inborn_genetic_diseases,.,.,.,.,.,.,.,.,Abnormality_of_the_nervous_system|Achondroplasia|Bell-shaped_thorax|Bowed_humerus|Camptodactyly-tall_stature-scoliosis-hearing_loss_syndrome|Carcinoma_of_colon|Cervical_cancer|Colorectal_cancer|Connective_tissue_disorder|Coronal_craniosynostosis|Craniosynostosis_syndrome|Crouzon_syndrome|Crouzon_syndrome-acanthosis_nigricans_syndrome|Disproportionate_short-limb_short_stature|Epidermal_nevus|FGFR3-related_chondrodysplasia|FGFR3-related_disorder|Facial_asymmetry|Femoral_bowing|Generalized_non-motor_(absence)_seizure|Germ_cell_tumor_of_testis|Growth_delay|Hamartoma|Hypochondroplasia|Inborn_genetic_diseases|Infantile_axial_hypotonia|LADD_syndrome_1|Lacrimoauriculodentodigital_syndrome_2|Larsen_syndrome|Lethal_short-limbed_short_stature|Levy-Hollister_syndrome|Lower_limb_undergrowth|Malignant_tumor_of_testis|Malignant_tumor_of_urinary_bladder|Muenke_syndrome|Multiple_myeloma|Narrow_chest|Neurodevelopmental_delay|Saethre-Chotzen_syndrome|Seborrheic_keratosis|See_cases|Seizure|Severe_achondroplasia-developmental_delay-acanthosis_nigricans_syndrome|Short_ribs|Short_stature|Skeletal_dysplasia|Skeletal_dysplasia_with_acanthosis_nigricans|Small_for_gestational_age|Spermatocytic_seminoma|Squamous_cell_lung_carcinoma|Thanatophoric_dysplasia|Thanatophoric_dysplasia,_type_2|Thanatophoric_dysplasia_type_1|Unilateral_renal_agenesis|Upper_limb_undergrowth|not_specified,.,4p_partial_monosomy_syndrome|Global_developmental_delay|Inborn_genetic_diseases|NSD2-related_disorder|Neurodevelopmental_delay|Rauch-Steindl_syndrome|Syndromic_intellectual_disability|Wolf-Hirschhorn_like_syndrome,.,.,.,.,.,.,.,.,.,.,.,.,.,.,Fibrous_dysplasia_of_jaw|SH3BP2-related_disorder,.,.,.,.,.,.,Huntington_disease,.,.,.,Congenital_myasthenic_syndrome|Congenital_myasthenic_syndrome_10|DOK7-related_disorder|Fetal_akinesia_deformation_sequence_1|Fetal_akinesia_deformation_sequence_3|Inborn_genetic_diseases|Rett_syndrome|See_cases,Myopia_23,_autosomal_recessive,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,Hypoplastic_enamel-onycholysis-hypohidrosis_syndrome|MSX1-related_disorder|Tooth_agenesis,_selective,_1,.,.,.,.,Curry-Hall_syndrome|EVC2-related_disorder|Ellis-van_Creveld_syndrome|Inborn_genetic_diseases|Jeune_thoracic_dystrophy|Short-rib_thoracic_dysplasia_6_with_or_without_polydactyly|Type_IV_short_rib_polydactyly_syndrome|not_specified,Curry-Hall_syndrome|EVC-related_disorder|Ellis-van_Creveld_syndrome|Short-rib_thoracic_dysplasia_6_with_or_without_polydactyly,.,.,.,Smith-Magenis_Syndrome-like,.,.,Autosomal_dominant_nonsyndromic_hearing_loss|Autosomal_dominant_nonsyndromic_hearing_loss_6|Cataract_41|Diabetes_mellitus|Inborn_genetic_diseases|Meniere_disease|Nonsyndromic_genetic_hearing_loss|Optic_atrophy|Rare_genetic_deafness|Retinal_dystrophy|See_cases|Type_2_diabetes_mellitus|WFS1-Related_Spectrum_Disorders|WFS1-related_disorder|WFS1-spectrum_disorder|Wolfram-like_syndrome|Wolfram_syndrome|Wolfram_syndrome_1|not_specified,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,Isolated_microphthalmia_6,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.;B_gain_source=.,esv2763806,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,DDD:12912|IMH|gnomAD-SV_v2.1_DUP_4_11165|gnomAD-SV_v2.1_DUP_4_11169|gnomAD-SV_v2.1_DUP_4_11174,DDD:12912|DDD:12919|IMH|gnomAD-SV_v2.1_DUP_4_11165|gnomAD-SV_v2.1_DUP_4_11169|gnomAD-SV_v2.1_DUP_4_11174,DDD:12912|DDD:12919|DDD:12922|IMH|gnomAD-SV_v2.1_DUP_4_11165|gnomAD-SV_v2.1_DUP_4_11169|gnomAD-SV_v2.1_DUP_4_11174,DDD:12912|DDD:12919|DDD:12922|IMH|gnomAD-SV_v2.1_DUP_4_11165|gnomAD-SV_v2.1_DUP_4_11169|gnomAD-SV_v2.1_DUP_4_11174,DDD:12912|DDD:12919|DDD:12922|IMH|gnomAD-SV_v2.1_DUP_4_11165|gnomAD-SV_v2.1_DUP_4_11169|gnomAD-SV_v2.1_DUP_4_11174,DDD:12912|IMH|gnomAD-SV_v2.1_DUP_4_11165|gnomAD-SV_v2.1_DUP_4_11169|gnomAD-SV_v2.1_DUP_4_11174,DDD:12912|IMH|gnomAD-SV_v2.1_DUP_4_11165|gnomAD-SV_v2.1_DUP_4_11169|gnomAD-SV_v2.1_DUP_4_11174,DDD:12912|IMH|gnomAD-SV_v2.1_DUP_4_11165|gnomAD-SV_v2.1_DUP_4_11169|gnomAD-SV_v2.1_DUP_4_11174,DDD:12912|IMH|gnomAD-SV_v2.1_DUP_4_11165|gnomAD-SV_v2.1_DUP_4_11169|gnomAD-SV_v2.1_DUP_4_11174,DDD:12912|IMH|gnomAD-SV_v2.1_DUP_4_11165|gnomAD-SV_v2.1_DUP_4_11169|gnomAD-SV_v2.1_DUP_4_11174,DDD:12912|IMH|gnomAD-SV_v2.1_DUP_4_11165|gnomAD-SV_v2.1_DUP_4_11169|gnomAD-SV_v2.1_DUP_4_11174,DDD:12912|IMH|gnomAD-SV_v2.1_DUP_4_11165|gnomAD-SV_v2.1_DUP_4_11169|gnomAD-SV_v2.1_DUP_4_11174,DDD:12912|IMH|gnomAD-SV_v2.1_DUP_4_11165|gnomAD-SV_v2.1_DUP_4_11169|gnomAD-SV_v2.1_DUP_4_11174,DDD:12912|IMH|gnomAD-SV_v2.1_DUP_4_11165|gnomAD-SV_v2.1_DUP_4_11169|gnomAD-SV_v2.1_DUP_4_11174,DDD:12912|IMH|gnomAD-SV_v2.1_DUP_4_11165|gnomAD-SV_v2.1_DUP_4_11169|gnomAD-SV_v2.1_DUP_4_11174,DDD:12912|IMH|gnomAD-SV_v2.1_DUP_4_11165|gnomAD-SV_v2.1_DUP_4_11169|gnomAD-SV_v2.1_DUP_4_11174,DDD:12912|IMH|gnomAD-SV_v2.1_DUP_4_11165|gnomAD-SV_v2.1_DUP_4_11169|gnomAD-SV_v2.1_DUP_4_11174,DDD:12912|IMH|gnomAD-SV_v2.1_DUP_4_11165|gnomAD-SV_v2.1_DUP_4_11169|gnomAD-SV_v2.1_DUP_4_11174,DDD:12912|IMH|gnomAD-SV_v2.1_DUP_4_11165|gnomAD-SV_v2.1_DUP_4_11169|gnomAD-SV_v2.1_DUP_4_11174,DDD:12912|IMH|gnomAD-SV_v2.1_DUP_4_11165|gnomAD-SV_v2.1_DUP_4_11169|gnomAD-SV_v2.1_DUP_4_11174,DDD:12912|IMH|gnomAD-SV_v2.1_DUP_4_11165|gnomAD-SV_v2.1_DUP_4_11169|gnomAD-SV_v2.1_DUP_4_11174,DDD:12912|IMH|gnomAD-SV_v2.1_DUP_4_11165|gnomAD-SV_v2.1_DUP_4_11169|gnomAD-SV_v2.1_DUP_4_11174;B_gain_coord=.,4:12282-121562,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,4:8951722-9487283|4:8952199-9486394|4:8958204-9492295|4:9009830-9541289|4:9043826-9467101,4:8951722-9487283|4:8952199-9486394|4:8958204-9492295|4:9009830-9541289|4:9043826-9467101|4:9176165-9236152,4:8951722-9487283|4:8952199-9486394|4:8958204-9492295|4:9009830-9541289|4:9043826-9467101|4:9176165-9236152|4:9212771-9237062,4:8951722-9487283|4:8952199-9486394|4:8958204-9492295|4:9009830-9541289|4:9043826-9467101|4:9176165-9236152|4:9212771-9237062,4:8951722-9487283|4:8952199-9486394|4:8958204-9492295|4:9009830-9541289|4:9043826-9467101|4:9176165-9236152|4:9212771-9237062,4:8951722-9487283|4:8952199-9486394|4:8958204-9492295|4:9009830-9541289|4:9043826-9467101,4:8951722-9487283|4:8952199-9486394|4:8958204-9492295|4:9009830-9541289|4:9043826-9467101,4:8951722-9487283|4:8952199-9486394|4:8958204-9492295|4:9009830-9541289|4:9043826-9467101,4:8951722-9487283|4:8952199-9486394|4:8958204-9492295|4:9009830-9541289|4:9043826-9467101,4:8951722-9487283|4:8952199-9486394|4:8958204-9492295|4:9009830-9541289|4:9043826-9467101,4:8951722-9487283|4:8952199-9486394|4:8958204-9492295|4:9009830-9541289|4:9043826-9467101,4:8951722-9487283|4:8952199-9486394|4:8958204-9492295|4:9009830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|hypochondroplasia|isolated_brachycephaly|isolated_plagiocephaly|severe_achondroplasia-developmental_delay-acanthosis_nigricans_syndrome|thanatophoric_dysplasia_type_1|thanatophoric_dysplasia_type_2,neurodegeneration,_childhood-onset,_with_multisystem_involvement_due_to_mitochondrial_dysfunction|neurodevelopmental_disorder,Rauch-Steindl_syndrome|Wolf-Hirschhorn_syndrome|syndromic_intellectual_disability,.,.,.,.,N-acetylaspartate_deficiency,.,.,.,.,.,.,.,.,.,cherubism,.,.,.,.,.,.,Huntington_disease|Lopes-Maciel-Rodan_syndrome|juvenile_Huntington_disease,.,.,.,congenital_myasthenic_syndrome_10|fetal_akinesia_deformation_sequence_1|fetal_akinesia_deformation_sequence_3|postsynaptic_congenital_myasthenic_syndrome,myopia_23,_autosomal_recessive,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,tooth_agenesis|tooth_agenesis,_selective,_1|tooth_and_nail_syndrome,.,.,.,.,Ellis-van_Creveld_syndrome|acrofacial_dysostosis,_Weyers_type,Ellis-van_Creveld_syndrome|acrofacial_dysostosis,_Weyers_type,.,.,.,.,.,.,Wolfram_syndrome|Wolfram_syndrome_1|Wolfram-like_syndrome|autosomal_dominant_nonsyndromic_hearing_loss|autosomal_dominant_nonsyndromic_hearing_loss_6|cataract_41|early-onset_nuclear_cataract|type_2_diabetes_mellitus,.,MAN2B2_deficiency,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,oculoauricular_syndrome,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.;GenCC_moi=.,.,.,.,.,AR,.,.,.,AR,.,.,AD|AR,.,.,.,.,.,.,AR,.,.,.,AR,AR,.,AR,.,.,.,.,.,AD,.,.,AR,.,.,.,.,.,AD|AR|sD,AR,AD,.,.,.,.,AR,.,.,.,.,.,.,.,.,.,AD,.,.,.,.,.,.,AD|AR,.,.,.,AR,AR,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,AD,.,.,.,.,AD|AR,AD|AR,.,.,.,.,.,.,AD|AR,.,AR,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,AR,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.;GenCC_classification=.,.,.,.,.,Limited|Supportive,.,.,.,Definitive|Strong,.,.,Definitive|Limited|Strong|Supportive,.,.,.,.,.,.,Strong|Supportive,.,.,.,Limited|Moderate,Definitive|Strong|Supportive,.,Limited,.,.,.,.,.,Strong,.,.,Strong|Supportive,.,.,.,.,.,Definitive|Limited|Moderate|Strong|Supportive,Moderate|Strong,Definitive|Strong,.,.,.,.,Limited,.,.,.,.,.,.,.,.,.,Strong|Supportive,.,.,.,.,.,.,Definitive|Limited|Strong|Supportive,.,.,.,Definitive|Limited|Strong|Supportive,Limited|Strong,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,Definitive|Limited|Strong|Supportive,.,.,.,.,Definitive|Strong|Supportive,Definitive|Limited|Strong|Supportive,.,.,.,.,.,.,Definitive|Limited|Strong|Supportive,.,Limited,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,Definitive|Strong|Supportive,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.;GenCC_pmid=.,.,.,.,.,23160277|26394607[PMID]_23160277[PMID],.,.,.,26996948|28581210|28771251,.,.,12641462|17044014|19578023|20301590[PMID]|22334370|22968130|24265693|24760071|24938718|25472526|26667666|28559085|30646425|8075643|8075643[PMID]|8394174|8595886,.,.,.,.,.,.,11163241|26539891|28422131|28422131[PMID],.,.,.,24250268|27210743,11735025|21394825|21480867|22976768|23917744|8680403[PMID],.,25342176|31125047,.,.,.,.,.,12101226|26480814|27094857|28408745|28955726|30356033|31041561|32075774|36341169|9524128,.,.,22466610|22466610[PMID]_22466611[PMID]_22466612[PMID],.,.,.,.,.,10053006|10053006[PMID]_18076102[PMID]|10671061|10696568|10914960[PMID]|11406607|11467490|15909185|16441300|16501574|16501574[PMID]|17033969|17033969[PMID]_24864036[PMID]|18076102|18818193|194190|19449430|20301540[PMID]|20301588[PMID]_20301628[PMID]_21438135[PMID]|20301628[PMID]|20301650[PMID]_23149434[PMID]|21536014|23149434[PMID]|24864036|27139183|28249712|28483234|7493034|7670477|7773297|7847369|7913883|8078586|8630492|8640234|8845844|8880573|8880574|9042914|9279753|9300656|9450868|9580776,26960370|27287194|30378700|30773800|36055214,19483677|26633542|28600779|29760529|29892088|30244530|30345613|31171569|9618163,.,.,.,.,11310630|15328569|16802720|19807691|26511242,.,.,.,.,.,.,.,.,.,11381256|12900899|17147794|17321449|17368082|19038533|22153076|22153077|22640988|24382142|24916406|26064398|NULL,.,.,.,.,.,.,11264541|17181545[PMID]|20301482[PMID]_21566141[PMID]|248284|26740508|27329733|7550343|7618107|7774020|8401587|8458085,.,.,.,16794080|16917026|17439981|18626973|19261599|19261599[PMID]|20147321|20301347[PMID]|29395672|31453852|32360404,23830514|25525168,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,1054139|10742093|10815578|11369996|11369996[PMID]|12097313|15264286|16498076|26502894|4521949|8466837|8469557|8696335|9742121|NULL,.,.,.,.,16404586|17024374|17547743|19810119|19876929|225500|22616035|23220543|23220543[PMID]_22791528[PMID]_12571802[PMID]_12468274[PMID]|23220543[PMID]_22791528[PMID]_16404586[PMID],10700184|10700184[PMID]|17024374|23220543|23220543[PMID]_22791528[PMID]_19744229[PMID]_18947413[PMID]|26748586|29321360|30076350|7628126,.,.,.,.,.,.,11709537|11709538|12073007|12754709|12955714|16151413|16648378|16806192|16806192[PMID]_12913071[PMID]|17492394|18544103|20069065|20069065[PMID]_20301750[PMID]|20301607[PMID]_24148127[PMID]|21446023|21538838|21602428|222300|23531866|23531866[PMID]|243330|248846|251462|25250959|27395765|28802351|29529044|31313226|31555371|34014271|35018440|606201,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,18423520|18423520[PMID]_25574057[PMID]|19379485|25574057|29140751,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.;NCBI_gene_ID=.,152687,255403,642280,654254,7700,693156,79963,170960,54872,112441426,.,5158,101928521,521,4636,84179,10336,100129917,10815,2580,84286,1609,10861,3425,53834,285498,.,.,10417,.,285463,1487,92070,10296,57654,54729,152877,7884,92305,10460,2261,3954,7468,677770,7469,100126332,401115,339983,353497,79441,10608,100616358,57732,402160,6047,8603,79155,6452,118,10227,317648,8602,2868,100750326,3064,345222,6002,3083,285489,4043,285492,100133461,152,348926,133060,85013,55646,166793,27065,53407,.,100507266,109623454,.,.,4487,.,54360,55351,10141,132884,2121,1400,100616201,389197,152789,.,285484,7466,5522,23324,93621,105374366,93622,339988,6286,114932,55330,9778,57533,.,257236,93624,80273,730971,57537,100616471,768239,100422826,84740,60312,.,84448,407052,54436,94031,105374374,8310,152992,27201,8532,.,3166,100287045,100287144,100287178,100287205,100287238,100288520,100287327,100287364,100287404,100287441,100287478,100287513,728369,728373,728379,728386,728393,728400,728405,391627,728419,391622;HGNC_gene_ID=.,HGNC:27196,HGNC:26889,HGNC:32472,HGNC:37138,HGNC:12926,HGNC:32827,HGNC:31,HGNC:29425,HGNC:25985,HGNC:53639,.,HGNC:8786,HGNC:40438,HGNC:846,HGNC:7586,HGNC:26177,HGNC:10066,HGNC:56108,HGNC:2309,HGNC:4113,HGNC:28709,HGNC:2856,HGNC:10993,HGNC:5391,HGNC:3693,HGNC:27729,.,.,HGNC:11253,.,HGNC:48337,HGNC:2494,HGNC:28307,HGNC:13731,HGNC:29304,HGNC:24975,HGNC:31860,HGNC:10904,HGNC:25137,HGNC:11524,HGNC:3690,HGNC:6556,HGNC:12766,HGNC:32580,HGNC:12768,HGNC:33689,HGNC:34437,HGNC:26742,HGNC:18870,HGNC:28719,HGNC:13906,HGNC:41877,HGNC:29334,HGNC:51180,HGNC:10067,HGNC:16822,HGNC:19118,HGNC:10825,HGNC:243,HGNC:16894,HGNC:20205,HGNC:16821,HGNC:4543,HGNC:37118,HGNC:4851,HGNC:33741,HGNC:9994,HGNC:4894,HGNC:26594,HGNC:6701,HGNC:26644,HGNC:53033,HGNC:283,HGNC:28017,HGNC:19656,HGNC:28201,HGNC:26021,HGNC:19883,HGNC:18790,HGNC:15942,.,HGNC:48877,HGNC:51876,.,.,HGNC:7391,.,HGNC:24435,HGNC:14217,HGNC:13716,HGNC:19747,HGNC:3497,HGNC:2365,HGNC:41550,HGNC:33766,HGNC:26460,.,HGNC:27728,HGNC:12762,HGNC:9306,HGNC:29623,HGNC:24549,HGNC:53458,HGNC:25109,HGNC:27958,HGNC:10504,HGNC:28796,HGNC:24206,HGNC:28992,HGNC:29246,.,HGNC:26900,HGNC:30781,HGNC:19696,HGNC:53379,HGNC:16698,HGNC:41616,HGNC:33131,HGNC:38194,HGNC:28141,HGNC:24017,.,HGNC:19195,HGNC:31647,HGNC:26009,HGNC:30406,HGNC:53506,HGNC:121,HGNC:26653,HGNC:4528,HGNC:2333,.,HGNC:5017,HGNC:43746,HGNC:44438,HGNC:44439,HGNC:44440,HGNC:44441,HGNC:44443,HGNC:44445,HGNC:44446,HGNC:44447,HGNC:44448,HGNC:44449,HGNC:44450,HGNC:44453,HGNC:44452,HGNC:44454,HGNC:37177,HGNC:44455,HGNC:44456,HGNC:44457,HGNC:12615,HGNC:44458,HGNC:37179;OMIM_ID=194648|616918|180072|605032|610130|252800|612041|602618|614632|134934|604407|602952|610647|602104|102680|613004|610285|104225|142983|607261|604831|606201|618899|142992,.,.,.,.,194648,.,.,.,616918,.,.,180072,.,.,.,.,.,.,605032,.,.,.,610130,252800,.,612041,.,.,.,.,.,602618,.,.,614632,.,.,.,.,.,134934,604407,602952,.,.,.,.,610647,.,.,.,.,.,.,.,.,.,602104,102680,.,.,.,.,.,613004,.,.,.,610285,104225,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,142983,.,.,.,.,607261,604831,.,.,.,.,.,.,606201,.,618899,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,142992,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.;OMIM_phenotype=.,.,.,.,.,?Polydactyly,_postaxial,_type_A6,_615226_(3)_AR,.,.,.,Neurodevelopmental_disorder_with_or_without_hypotonia,_seizures,_and_cerebellar_atrophy,_616917_(3)_AR|[Blood_group,_EMM_system],_619812_(3)_AR,.,.,Night_blindness,_congenital_stationary,_AD_2,_163500_(3)_AD|Retinitis_pigmentosa-40,_613801_(3)_AR,.,.,.,.,.,.,Developmental_and_epileptic_encephalopathy_63,_617976_(3)_AR,.,.,.,?Hypersulfaturia,_620372_(3)_AR|?Nephrolithiasis,_calcium_oxalate,_1,_167030_(3)_AR,Mucopolysaccharidosis_Ih,_607014_(3)_AR|Mucopolysaccharidosis_Ih/s,_607015_(3)_AR|Mucopolysaccharidosis_Is,_607016_(3)_AR,.,?Spermatogenic_failure_62,_619673_(3)_AR|Recombination_rate_QTL_1,_612042_(3),.,.,.,.,.,Hypotonia,_ataxia,_developmental_delay,_and_tooth_enamel_defect_syndrome,_617915_(3)_AD,.,.,UV-sensitive_syndrome_3,_614640_(3)_AR,.,.,.,.,.,Achondroplasia,_100800_(3)_AD|Bladder_cancer,_somatic,_109800_(3)|CATSHL_syndrome,_610474_(3)_AD,AR|Cervical_cancer,_somatic,_603956_(3)|Colorectal_cancer,_somatic,_114500_(3)|Crouzon_syndrome_with_acanthosis_nigricans,_612247_(3)_AD|Hypochondroplasia,_146000_(3)_AD|LADD_syndrome_2,_620192_(3)_AD|Muenke_syndrome,_602849_(3)_AD|Nevus,_epidermal,_somatic,_162900_(3)|SADDAN,_616482_(3)_AD|Spermatocytic_seminoma,_somatic,_273300_(3)|Thanatophoric_dysplasia,_type_I,_187600_(3)_AD|Thanatophoric_dysplasia,_type_II,_187601_(3)_AD,Neurodegeneration,_childhood-onset,_with_multisystem_involvement_due_to_mitochondrial_dysfunction,_620089_(3)_AR,Rauch-Steindl_syndrome,_619695_(3)_AD,.,.,.,.,?N-acetylaspartate_deficiency,_614063_(3)_AR,.,.,.,.,.,.,.,.,.,Cherubism,_118400_(3)_AD,(Hypertension,_essential,_salt-sensitive),_145500_(3)_Multifactorial,.,.,.,.,.,Huntington_disease,_143100_(3)_AD|Lopes-Maciel-Rodan_syndrome,_617435_(3)_AR,.,.,.,Fetal_akinesia_deformation_sequence_3,_618389_(3)_AR|Myasthenic_syndrome,_congenital,_10,_254300_(3)_AR,Myopia_23,_AR,_615431_(3)_AR,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,Ectodermal_dysplasia_3,_Witkop_type,_189500_(3)_AD|Orofacial_cleft_5,_608874_(3)_AD|Tooth_agenesis,_selective,_1,_with_or_without_orofacial_cleft,_106600_(3)_AD,.,.,.,.,Ellis-van_Creveld_syndrome,_225500_(3)_AR|Weyers_acrofacial_dysostosis,_193530_(3)_AD,?Weyers_acrofacial_dysostosis,_193530_(3)_AD|Ellis-van_Creveld_syndrome,_225500_(3)_AR,.,.,.,.,.,.,?Cataract_41,_116400_(3)_AD|Deafness,_AD_6/14/38,_600965_(3)_AD|Wolfram_syndrome_1,_222300_(3)_AR|Wolfram-like_syndrome,_AD,_614296_(3)_AD|(Diabetes_mellitus,_noninsulin-dependent,_association_with),_125853_(3)_AD,.,Congenital_disorder_of_glycosylation_type_1EE_with_or_without_immunodeficiency,_621140_(3)_AR,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,Oculoauricular_syndrome,_612109_(3)_AR,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.;OMIM_inheritance=.,.,.,.,.,AR,.,.,.,AR,.,.,AD|AR,.,.,.,.,.,.,AR,.,.,.,AR,AR,.,AR,.,.,.,.,.,AD,.,.,AR,.,.,.,.,.,AD|AD,AR,AR,AD,.,.,.,.,AR,.,.,.,.,.,.,.,.,.,AD,Multifactorial,.,.,.,.,.,AD|AR,.,.,.,AR,AR,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,AD,.,.,.,.,AD|AR,AD|AR,.,.,.,.,.,.,AD|AR,.,AR,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,AR,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.;OMIM_morbid=yes,.,.,.,.,.,.,.,.,yes,.,.,yes,.,.,.,.,.,.,yes,.,.,.,.,yes,.,yes,.,.,.,.,.,yes,.,.,yes,.,.,.,.,.,yes,yes,yes,.,.,.,.,.,.,.,.,.,.,.,.,.,.,yes,.,.,.,.,.,.,yes,.,.,.,yes,yes,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,yes,.,.,.,.,yes,yes,.,.,.,.,.,.,yes,.,yes,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,yes,.,.,.,.,.,.,yes,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.;OMIM_morbid_candidate=yes,.,.,.,.,yes,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,yes,.,.,yes,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,yes,.,.,.,.,.,.,.,.,.,.,yes,.,.,.,.,.,yes,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,yes,.,.,.,.,.,.,yes,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.;LOEUF_bin=0,6,.,.,7,7,.,.,9,5,.,.,6,.,.,9,.,1,.,2,1,6,3,8,6,3,4,.,.,9,.,.,1,.,2,7,3,6,4,8,3,3,3,.,.,2,.,.,2,7,6,2,.,2,.,2,0,3,6,1,7,.,2,6,.,0,2,3,4,5,6,8,.,3,.,9,8,5,4,7,5,.,.,.,.,.,5,.,9,5,.,5,5,1,.,7,0,.,.,9,1,5,6,.,.,.,9,8,9,0,2,.,.,2,4,.,2,.,.,.,.,3,.,2,.,7,6,.,5,7,9,9,.,3,9,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.;GnomAD_pLI=1,0.3055,.,.,0.098159,0.10393,.,.,0.094789,5.4258e-15,.,.,2.6155e-27,.,.,8.4023e-14,.,0.95326,.,0.82499,0.0051818,3.0549e-09,1.7603e-09,1.0564e-11,3.7599e-13,0.011908,0.0015645,.,.,2.6609e-15,.,.,0.98442,.,0.22741,5.4127e-25,0.71465,0.0035705,0.068148,2.3074e-11,2.7082e-07,1.6432e-05,1.2141e-06,.,.,0.13469,.,.,0.86458,9.488e-41,1.2992e-09,0.77635,.,0.07234,.,0.79973,0.99993,0.0015926,1.156e-11,0.9883,7.3331e-11,.,2.1363e-06,1.6286e-15,.,1,0.80456,4.0922e-09,1.9843e-08,0.00010263,4.4951e-07,0.45772,.,0.50159,.,4.8437e-24,0.00019994,3.758e-07,1.3752e-08,0.0088286,2.4881e-07,.,.,.,.,.,0.16517,.,1.0733e-05,4.9116e-08,.,1.0207e-34,3.4620000000000003e-25,0.99173,.,7.736100000000001e-19,0.99986,.,.,1.6230999999999999e-38,0.89954,6.557e-23,0.31404,.,.,.,0.033257,0.0025481,0.10151,0.99999,0.039267,.,.,0.72366,0.13916,.,0.0031696,.,.,.,.,2.3828e-07,.,0.0045858,.,6.0939e-35,6.5843e-08,.,7.6016e-16,2.0315e-22,2.6834e-06,8.8063e-36,.,0.72623,0.28656,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.;ExAC_pLI=1,1.7753e-05,.,.,1.3118e-09,0.16189,.,.,5.9729e-11,8.7751e-07,.,.,1.6257e-13,.,.,4.4299e-08,.,0.9434,.,0.79579,0.97313,0.00043963,0.001194,4.013e-06,2.6418e-08,0.58219,0.12523,.,.,1.0881e-06,.,.,0.97976,.,0.84486,8.8875e-14,0.18842,3.007e-05,0.51566,1.5746e-06,0.091952,0.0029091,0.081055,.,.,0.16689,.,.,0.32468,2.9965999999999997e-32,8.8992e-07,0.89694,.,0.88846,.,0.62895,0.99782,2.9733e-06,0.0031019,0.6113,3.0178e-07,.,0.017449,5.6904e-07,.,1,0.32217,0.00056037,5.2082e-07,0.0048084,0.0060843,.,.,0.64595,.,7.3147e-16,0.11006,0.00013245,0.0091642,0.0045383,1.1678e-06,.,.,.,.,.,0.27536,.,0.00065277,0.0043235,.,1.0532999999999999e-21,8.015e-08,0.95327,.,6.3423e-10,0.99317,.,.,.,0.56445,4.3573e-18,0.17706,.,.,.,0.048649,0.008908,0.15897,0.99472,0.909,.,.,0.34506,0.89627,.,0.0026463,.,3.335e-11,.,.,0.37607,.,0.76242,.,1.082e-27,1.7199e-05,.,3.0316e-12,1.4776e-13,1.2826e-05,4.5079999999999994e-21,.,0.12528,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.;AnnotSV_ranking_score=1.9;AnnotSV_ranking_criteria=1A_(cf_Gene_count,_RE_gene,_+0.00)|2A_(cf_P_loss_source,_+1.00)|3C_(155_genes,_+0.90)|5F_(+0.00);ACMG_class=5,full=5,full=5,full=5,full=5,full=5,full=5,full=5,full=5,full=5,full=5,full=5,full=5,full=5,full=5,full=5,full=5,full=5,full=5,full=5,full=5,full=5,full=5,full=5,full=5,full=5,full=5,full=5,full=5,full=5,full=5,full=5,full=5,full=5,full=5,full=5,full=5,full=5,full=5,full=5,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ist_ranking=Benign;Annotation_mode=full,split;CytoBand=p15.33;Gene_name=ZDHHC11B;Closest_left=TPPP;Closest_right=ZDHHC11;Gene_count=1;Tx=.,NM_001351303;Tx_version=.,2;Tx_start=.,710469;Tx_end=.,784844;Overlapped_tx_length=.,53806;Overlapped_CDS_length=.,1058;Overlapped_CDS_percent=.,94;Frameshift=.,yes;Exon_count=.,14;Location=.,intron1-intron12;Location2=.,5'UTR-CDS;Dist_nearest_SS=.,6214;Nearest_SS_type=.,3';Intersect_start=.,723194;Intersect_end=.,777000;RE_gene=NDUFS6_(morbid/RE=ABC_enhancer)|SDHA_(morbid/RE=EA_enhancer)|SLC9A3_(morbid/RE=GH_enhancer)|TRIP13_(morbid/RE=ABC_enhancer+EA_enhancer);po_P_gain_source=dbVar:nssv15164761|dbVar:nssv15125831|dbVar:nssv15146713|dbVar:nssv15139036|dbVar:nssv15136993|dbVar:nssv15145871|dbVar:nssv15147378|dbVar:nssv15147960|dbVar:nssv15146962|dbVar:nssv15147414|dbVar:nssv15164765|dbVar:nssv15164764|dbVar:nssv15149091|dbVar:nssv15147291|dbVar:nssv15146993|dbVar:nssv15146992|dbVar:nssv15150844|dbVar:nssv17976838|dbVar:nssv15153658|dbVar:nssv15151111|nssv15151221;po_P_gain_coord=5:13649-180905029|5:22150-10308848|5:22150-15851485|5:22150-1659250|5:22150-2324057|5:22150-23607162|5:22150-28075213|5:22150-33418294|5:22150-34041255|5:22150-73708550|5:25329-180693344|5:25329-18698028|5:25329-19661628|5:50094-46115086|5:54955-35680947|5:54955-45649963|5:113577-20240392|5:113577-29310520|5:113577-35739404|5:113578-180719789;po_P_gain_percent=0.03|0.52|0.34|3.29|2.34|0.23|0.19|0.16|0.16|0.07|0.03|0.29|0.27|0.12|0.15|0.12|0.27|0.18|0.15|0.03;po_P_loss_phen=5p15_terminal_(Cri_du_chat_syndrome)_region;po_P_loss_source=dbVar:nssv18330851|dbVar:nssv18841914|dbVar:nssv17649947|dbVar:nssv15147173|dbVar:nssv15145875|dbVar:nssv15147440|dbVar:nssv15146459|dbVar:nssv15146622|dbVar:nssv15147702|dbVar:nssv15136268|dbVar:nssv15146696|dbVar:nssv15145969|dbVar:nssv15151220|dbVar:nssv15132269|dbVar:nssv15148862|dbVar:nssv15148231|dbVar:nssv15147402|dbVar:nssv15146458|dbVar:nssv15149597|dbVar:nssv15147956|dbVar:nssv15148968|dbVar:nssv15148844|dbVar:nssv15146717|dbVar:nssv15148985|dbVar:nssv15148016|dbVar:nssv15148112|dbVar:nssv15145972|dbVar:nssv16866488|dbVar:nssv15140376|dbVar:nssv15148058|dbVar:nssv15148554|dbVar:nssv15132604|dbVar:nssv15134412|dbVar:nssv15147416|dbVar:nssv15140515|dbVar:nssv15135741|dbVar:nssv15141721|dbVar:nssv15138139|dbVar:nssv15139127|dbVar:nssv15139876|dbVar:nssv15134733|dbVar:nssv15142657|dbVar:nssv15141520|dbVar:nssv15147171|dbVar:nssv15150118|dbVar:nssv15146522|dbVar:nssv15164763|dbVar:nssv15150859|dbVar:nssv15166282|dbVar:nssv15132966|dbVar:nssv15132967|HI3:ISCA-37390|dbVar:nssv15146165|nssv15146815|dbVar:nssv15148064|dbVar:nssv15132680|dbVar:nssv15223218|dbVar:nssv15134417|dbVar:nssv16216549|dbVar:nssv15149121|dbVar:nssv15150161|dbVar:nssv15137858|dbVar:nssv15150229|dbVar:nssv15149886|dbVar:nssv16208009|dbVar:nssv17976839|dbVar:nssv15148942|dbVar:nssv16208008|dbVar:nssv15149911|dbVar:nssv15151402|dbVar:nssv15153655|dbVar:nssv15152885|dbVar:nssv15151403|dbVar:nssv18326313|dbVar:nssv15149508|dbVar:nssv16208007|dbVar:nssv15151241|dbVar:nssv15150601|dbVar:nssv15150625|dbVar:nssv17977082|dbVar:nssv15145995|dbVar:nssv15151861|dbVar:nssv16255066|dbVar:nssv16208006|dbVar:nssv16208011|dbVar:nssv15142295|dbVar:nssv16208010|dbVar:nssv15153656|dbVar:nssv15152886|dbVar:nssv15137538|dbVar:nssv15153657|dbVar:nssv17976724|dbVar:nssv15146000|dbVar:nssv17956677|dbVar:nssv18330187|dbVar:nssv18329119|dbVar:nssv18329189|dbVar:nssv15606071|dbVar:nssv15606072|dbVar:nssv16213555|dbVar:nssv16213990|dbVar:nssv18787102|dbVar:nssv18790308;po_P_loss_coord=5:2-32091038|5:10002-14320109|5:13201-4012072|5:22150-10044199|5:22150-11429370|5:22150-11530503|5:22150-12004203|5:22150-12820111|5:22150-13362684|5:22150-1429714|5:22150-16584684|5:22150-16930125|5:22150-17788806|5:22150-1826370|5:22150-21217229|5:22150-21726469|5:22150-22775404|5:22150-23132155|5:22150-24835567|5:22150-25699714|5:22150-26594000|5:22150-27188057|5:22150-27485726|5:22150-27611270|5:22150-27788723|5:22150-28429348|5:22150-28589299|5:22150-29048823|5:22150-2965987|5:22150-32248116|5:22150-34041196|5:22150-3404358|5:22150-3557056|5:22150-35831640|5:22150-4163847|5:22150-4260264|5:22150-4641409|5:22150-4833739|5:22150-5060009|5:22150-5102699|5:22150-6060215|5:22150-6112711|5:22150-6500967|5:22150-7213388|5:22150-9958240|5:22420-19281001|5:25329-18662625|5:25329-30672798|5:25329-31343671|5:37693-2747022|5:37693-2913319|5:37694-11347262|5:50094-15678560|5:50094-30112642|5:50094-4014761|5:52187-4163906|5:54955-5603514|5:71905-22078969|5:79147-15509107|5:79147-22152284|5:95244-5834664|5:113577-10163809|5:113577-10729838|5:113577-11767720|5:113577-12601027|5:113577-14684471|5:113577-14738180|5:113577-15291661|5:113577-15822225|5:113577-1708530|5:113577-1816055|5:113577-19167699|5:113577-2027194|5:113577-23047959|5:113577-23364376|5:113577-25091472|5:113577-26234903|5:113577-26948599|5:113577-30712376|5:113577-33998394|5:113577-4175855|5:113577-4305172|5:113577-4325585|5:113577-5194484|5:113577-5380741|5:113577-5657333|5:113577-5884399|5:113577-6125331|5:113577-6244090|5:113577-7946262|5:113577-8007018|5:113577-8876045|5:113578-16952167|5:113578-17654787|5:113578-26164852|5:113578-31448527|5:140475-26906925|5:140475-9792158|5:218462-1295161|5:218465-1297488|5:218472-1895829|5:482644-1895829;po_P_loss_percent=0.17|0.38|1.35|0.54|0.47|0.47|0.45|0.42|0.40|3.82|0.32|0.32|0.30|2.98|0.25|0.25|0.24|0.23|0.22|0.21|0.20|0.20|0.20|0.20|0.19|0.19|0.19|0.19|1.83|0.17|0.16|1.59|1.52|0.15|1.30|1.27|1.16|1.12|1.07|1.06|0.89|0.88|0.83|0.75|0.54|0.28|0.29|0.18|0.17|1.99|1.87|0.48|0.34|0.18|1.36|1.31|0.97|0.24|0.35|0.24|0.94|0.54|0.51|0.46|0.43|0.37|0.37|0.35|0.34|3.37|3.16|0.28|2.81|0.23|0.23|0.22|0.21|0.20|0.18|0.16|1.32|1.28|1.28|1.06|1.02|0.97|0.93|0.90|0.88|0.69|0.68|0.61|0.32|0.31|0.21|0.17|0.20|0.56|5.00|4.99|3.21|3.81;B_gain_source=DDD:16279|DDD:16284|dgv131e203;B_gain_coord=5:653582-875018|5:686604-840273|5:708603-865477;B_gain_AFmax=0.1231;B_loss_source=DDD:16279|DDD:16284|dgv1000e199|dgv131e203;B_loss_coord=5:653582-875018|5:682475-788359|5:686604-840273|5:708603-865477;B_loss_AFmax=0.0497;B_inv_source=IMH;B_inv_coord=5:238915-1591166|5:244073-1583559|5:244336-1583852|5:261961-1570436;B_inv_AFmax=0.2771;po_B_gain_someG_source=5:686604-840273_DDD:16279|5:714989-733938_1000g|5:714989-733938_1000g|5:717638-748444_DDD:16285|5:757677-778933_1000g|5:757677-778933_1000g|5:763398-838450_DDD:16291;po_B_gain_someG_coord=5:653582-875018_dgv131e203|5:708603-865477_DDD:16284|5:714989-733938_1000g|5:714989-733938_dgv1061e214|5:754104-754760_IMH|5:757677-778933_1000g|5:757677-778933_dgv1062e214;po_B_loss_someG_source=5:682475-788359_dgv1000e199|5:708603-865477_DDD:16284|5:714989-733938_1000g|chr5:724284-724491_dbVar|5:747151-776399_DDD:16288|chr5:757676-778933_dbVar|5:757677-778933_esv3603772|chr5:764454-764539_dbVar|;po_B_loss_someG_coord=5:653582-875018_dgv131e203|5:686604-840273_DDD:16279|chr5:714988-733938_dbVar|5:714989-733938_esv3603766|chr5:725960-726319_dbVar|5:747846-753492_esv2673755|5:757677-778933_1000g|5:763398-838450_DDD:16291|chr5:774523-774617_dbVar;GC_content_left=0.395;GC_content_right=0.58;Repeat_coord_left=5:721917-723166;Repeat_type_left=L1ME3F;SegDup_left=5:686123-731394;SegDup_right=5:770128-777143;DDD_HI_percent=98.37;ExAC_synZ=0.535222227518795;ExAC_misZ=-0.0274451648003615;NCBI_gene_ID=.,653082;HGNC_gene_ID=.,HGNC:32962;LOEUF_bin=8;GnomAD_pLI=3.6787e-13;ExAC_pLI=0.043228;AnnotSV_ranking_score=0;AnnotSV_ranking_criteria=1A_(cf_Gene_count,_RE_gene,_+0.00)|2B_(cf_po_P_gain_source,_TS,_OMIM_morbid,_+0.00)|2E_(cf_B_gain_source,_+0.00)|2L_(ZDHHC11B,_+0.00)|3A_(1_gene,_+0.00)|4O_(cf_po_B_gain_AllG_source,_B_gain_source,_po_B_gain_SomeG_source,_+0.00)|5F_(+0.00);ACMG_class=3,full=3;END=777000;SVLEN=53806\tGT\t1/.\n5\t88774329\t.\tT\t<DEL>\t.\tPASS\tAnnotSV_ID=5_88774329_91802402_DEL_1;SV_start=88774329;Biologist_annotation=TAD_MEF2C;Biologist_ranking=Pathogenic;Annotation_mode=full,split,split,split,split,split,split,split,split,split,split,split,split;CytoBand=q14.3;Gene_name=LOC102724637|MIR3660|LINC01339|CETN3|LOC731157|MBLAC2|POLR3G|LYSMD3|ADGRV1|LUCAT1|ARRDC3|ARRDC3-AS1,LOC102724637,MIR3660,LINC01339,CETN3,LOC731157,MBLAC2,POLR3G,LYSMD3,ADGRV1,LUCAT1,ARRDC3,ARRDC3-AS1;Closest_left=MEF2C-AS1;Closest_right=LOC105379082;Gene_count=12;Tx=.,NR_188242,NR_037433,NR_120601,NM_001297765,NR_105024,NM_203406,NM_001370354,NM_198273,NM_032119,NR_103548,NM_020801,NR_027435;Tx_version=.,1,1,1,2,1,2,1,2,4,1,4,1;Tx_start=.,89198108,89312437,89454155,89688073,89705816,89754025,89769745,89811442,89854613,90598802,90664447,90676163;Tx_end=.,89269817,89312537,89585888,89705573,89706486,89770588,89810374,89825401,90460254,90610219,90679134,90716532;Overlapped_tx_length=.,71709,100,131733,17500,670,16563,40629,13959,605641,11417,14687,40369;Overlapped_CDS_length=.,0,0,0,576,0,840,672,921,18921,0,1245,0;Overlapped_CDS_percent=.,0,0,0,100,0,100,100,100,100,0,100,0;Frameshift=.,.,.,.,no,.,no,no,no,no,.,no,.;Exon_count=.,6,1,6,6,2,2,8,3,90,5,8,3;Location=.,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd;Location2=.,UTR,UTR,UTR,5'UTR-3'UTR,UTR,5'UTR-3'UTR,5'UTR-3'UTR,5'UTR-3'UTR,5'UTR-3'UTR,UTR,5'UTR-3'UTR,UTR;Intersect_start=.,89198108,89312437,89454155,89688073,89705816,89754025,89769745,89811442,89854613,90598802,90664447,90676163;Intersect_end=.,89269817,89312537,89585888,89705573,89706486,89770588,89810374,89825401,90460254,90610219,90679134,90716532;RE_gene=AGO2_(morbid/RE=mTL_miRNA)|B4GALNT1_(morbid/RE=mTL_miRNA)|CEP57_(morbid/RE=mTL_miRNA)|EPHA2_(morbid/RE=mTL_miRNA)|GFPT1_(morbid/RE=mTL_miRNA)|GPSM2_(morbid/RE=mTL_miRNA)|KDM6A_(HI=3/morbid/RE=mTL_miRNA)|KMT2A_(HI=3/morbid/RE=mTL_miRNA)|MEF2C_(HI=3/morbid/RE=ABC_enhancer+GH_enhancer+GH_promoter)|MSX2_(morbid/RE=mTL_miRNA)|NODAL_(morbid/RE=mTL_miRNA)|NR2F1_(HI=3/morbid/RE=ABC_enhancer)|PIGS_(morbid/RE=mTL_miRNA)|PLEKHM1_(morbid/RE=mTL_miRNA)|PPP1R15B_(morbid/RE=mTL_miRNA)|PRKACB_(morbid/R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701-100860147|5:87485354-93120303|5:87512315-95096562|5:87664107-91698938|5:87764486-90147447|5:88016215-88783092|5:88062498-89028098|5:88232588-93437723|5:88348148-88783092|5:88377170-104022949|5:89670424-127412115|5:90682370-97701584|5:90707526-130655256|5:91064111-93896378|5:91327087-93283043|5:91504102-104858348;po_P_loss_percent=1.91|16.86|11.27|12.41|51.11|49.62|4.48|17.32|5.05|21.34|53.74|39.93|72.48|57.62|1.14|26.28|58.17|2.01|19.35|5.65|15.96|2.74|26.07|24.30|2.23;P_snvindel_nb=435,.,.,.,.,.,.,.,.,435,.,.,.;P_snvindel_phen=ADGRV1-related_disorder|Autosomal_recessive_sensorineural_hearing_loss|Ear_malformation|Febrile_seizures,_familial,_4|Hearing_impairment|Hearing_loss,_autosomal_recessive|Rare_genetic_deafness|Retinal_dystrophy|Usher_syndrome|Usher_syndrome_type_2|Usher_syndrome_type_2A|Usher_syndrome_type_2C,.,.,.,.,.,.,.,.,ADGRV1-related_disorder|Autosomal_recessive_sensorineural_hearing_loss|Ear_malformation|Febrile_seizures,_familial,_4|Hearing_impairment|Hearing_loss,_autosomal_recessive|Rare_genetic_deafness|Retinal_dystrophy|Usher_syndrome|Usher_syndrome_type_2|Usher_syndrome_type_2A|Usher_syndrome_type_2C,.,.,.;B_inv_source=IMH;B_inv_coord=5:24758285-101693420|5:28691217-97582419|5:84488955-162334467;B_inv_AFmax=0.5483;po_B_gain_someG_source=5:89788663-89788952_IMH|5:90866987-90867072_gnomAD-SV_v2.1_DUP_5_15730;po_B_gain_someG_coord=5:89264627-89264683_gnomAD-SV_v2.1_DUP_5_15710|5:89860422-89860742_1000g;po_B_loss_someG_source=chr5:88806361-88806411_dbVar|chr5:88831687-88837255_dbVar|chr5:89003565-89004043_dbVar|chr5:89003715-89004039_dbVar|5:89003716-89004039_esv3605750|5:89003721-89004043_esv2657768|chr5:89029798-89029893_dbVar|chr5:89045213-89045498_dbVar|chr5:89047323-89047872_dbVar|chr5:89067203-89083487_dbVar|chr5:89101197-89101273_dbVar|chr5:89113277-89114892_dbVar|chr5:89131325-89131385_dbVar|chr5:89209000-89239000_dbVar|chr5:89257321-89262348_dbVar|chr5:89359000-89373000_dbVar|chr5:89388378-89389723_dbVar|chr5:89436013-89437273_dbVar|chr5:89563059-89564683_dbVar|chr5:89578750-89579142_dbVar...;po_B_loss_someG_coord=chr5:88803653-88817310_dbVar|chr5:88824732-88824785_dbVar|chr5:88832512-88834519_dbVar|5:89003565-89004043_gnomAD-SV_v2.1_DEL_5_59965|5:89003716-89004039_1000g|5:89003721-89004043_IMH|chr5:89018000-89031000_dbVar|chr5:89039679-89039840_dbVar|chr5:89047322-89047872_dbVar|chr5:89052853-89052953_dbVar|chr5:89084915-89086582_dbVar|chr5:89112611-89115172_dbVar|chr5:89124435-89124505_dbVar|chr5:89171348-89171401_dbVar|chr5:89234368-89234446_dbVar|chr5:89299879-89302011_dbVar|chr5:89388306-89389753_dbVar|chr5:89407162-89407215_dbVar|chr5:89471562-89472013_dbVar|chr5:89574182-89585732_dbVar...;GC_content_left=0.335;GC_content_right=0.275;Repeat_coord_right=5:91802185-91802338;Repeat_type_right=L2a;HI=.,.,.,.,.,.,.,.,.,30,.,.,.;TS=.,.,.,.,.,.,.,.,.,0,.,.,.;DDD_HI_percent=38.97,.,.,.,5.94,.,38.68,38.97,28.58,25.58,.,10.63,.;ExAC_delZ=0.855259196084686,.,.,.,0.855259196084686,.,-0.0315707309390069,0.478729015674934,.,.,.,0.745040589608255,.;ExAC_dupZ=1.02927857149332,.,.,.,1.02927857149332,.,0.414676882744812,0.798950378312061,.,.,.,1.00834122048279,.;ExAC_cnvZ=1.26063232799998,.,.,.,1.26063232799998,.,0.420940108293089,0.929744998199481,.,.,.,1.19108832249232,.;ExAC_synZ=1.13380694792028,.,.,.,-1.0886019180172,.,1.13380694792028,0.494543657071353,0.0616099264393714,.,.,0.196967347879621,.;ExAC_misZ=1.83366808117122,.,.,.,0.322004765294048,.,0.9911283716698,-0.512733755306802,-0.398837217747125,.,.,1.83366808117122,.;GenCC_disease=.,.,.,.,.,.,.,.,.,Usher_syndrome_type_2|Usher_syndrome_type_2C|febrile_seizures,_familial,_4|nonsyndromic_genetic_hearing_loss,.,.,.;GenCC_moi=.,.,.,.,.,.,.,.,.,AD|AR,.,.,.;GenCC_classification=.,.,.,.,.,.,.,.,.,Definitive|Disputed_Evidence|Limited|Strong|Supportive,.,.,.;GenCC_pmid=.,.,.,.,.,.,.,.,.,14740321|16775142|19357116|19357117|20301515[PMID]|22135276|22147658|23441107|25572244|280396,.,.,.;NCBI_gene_ID=.,.,100500825,101929495,1070,.,153364,10622,116068,84059,100505994,57561,100129716;HGNC_gene_ID=.,.,HGNC:38985,HGNC:50549,HGNC:1868,.,HGNC:33711,HGNC:30075,HGNC:26969,HGNC:17416,HGNC:48498,HGNC:29263,HGNC:44145;OMIM_ID=602851,.,.,.,.,.,.,.,.,602851,.,.,.;OMIM_phenotype=.,.,.,.,.,.,.,.,.,?Febrile_seizures,_familial,_4,_604352_(3)_AD|Usher_syndrome,_type_2C,_605472_(3)_Digenic_dominant,AR|Usher_syndrome,_type_2C,_GPR98/PDZD7_digenic,_605472_(3)_Digenic_dominant,AR,.,.,.;OMIM_inheritance=.,.,.,.,.,.,.,.,.,AD|Digenic_dominant,AR,.,.,.;OMIM_morbid=yes,.,.,.,.,.,.,.,.,yes,.,.,.;OMIM_morbid_candidate=yes,.,.,.,.,.,.,.,.,yes,.,.,.;LOEUF_bin=1,.,.,.,7,.,7,8,3,.,.,1,.;GnomAD_pLI=0.98715,.,.,.,0.00010528,.,4.5418e-05,1.7611e-10,0.30382,.,.,0.98715,.;ExAC_pLI=0.97875,.,.,.,0.011321,.,0.0002801,6.4276e-05,0.77182,.,.,0.97875,.;AnnotSV_ranking_score=1;AnnotSV_ranking_criteria=1A_(cf_Gene_count,_RE_gene,_+0.00)|2A_(cf_P_loss_source,_+1.00)|3A_(12_genes,_+0.00)|5F_(+0.00);ACMG_class=5,full=5,full=5,full=5,full=5,full=5,full=5,full=5,full=5,full=5,full=5,full=5,full=5;END=91802402;SVLEN=-3028074\tGT\t1/.\n6\t266080\t.\tC\t<DEL>\t.\tPASS\tAnnotSV_ID=6_266080_362290_DEL_1;SV_start=266080;Biologist_ranking=Benign;Annotation_mode=full,split;CytoBand=p25.3;Gene_name=DUSP22;Closest_left=LINC03066;Closest_right=IRF4;Gene_count=1;Tx=.,NM_001286555;Tx_version=.,3;Tx_start=.,292486;Tx_end=.,351355;Overlapped_tx_length=.,58869;Overlapped_CDS_length=.,618;Overlapped_CDS_percent=.,100;Frameshift=.,no;Exon_count=.,7;Location=.,txStart-txEnd;Location2=.,5'UTR-3'UTR;Intersect_start=.,292486;Intersect_end=.,351355;RE_gene=EXOC2_(morbid/RE=ABC_enhancer+EA_enhancer+GH_promoter_enhancer)|FOXC1_(HI=3/morbid/RE=ABC_enhancer)|IRF4_(morbid/RE=ABC_enhancer+EA_enhancer+GH_enhancer+GH_promoter_enhancer);po_P_gain_source=dbVar:nssv15166690|dbVar:nssv15132417|dbVar:nssv15166692|dbVar:nssv15120571|dbVar:nssv17649861|dbVar:nssv15138806|dbVar:nssv15150238|dbVar:nssv15136852|dbVar:nssv15137715|dbVar:nssv15139508|dbVar:nssv15139953|dbVar:nssv15154408|dbVar:nssv15154409|dbVar:nssv15772668|dbVar:nssv15161578|dbVar:nssv15161859|nssv15161868|dbVar:nssv15132517|dbVar:nssv15133942|dbVar:nssv15135449|dbVar:nssv15131978|dbVar:nssv15168255|dbVar:nssv15124407|nssv15153178|dbVar:nssv15124483|dbVar:nssv16255328;po_P_gain_coord=6:60108-171054786|6:106432-18360826|6:108667-170980171|6:144958-5239414|6:149620-3951208|6:152635-14417234|6:152635-15732394|6:152635-6027780|6:155808-17058645|6:156975-11551050|6:156975-13081433|6:156975-13502033|6:156975-21955964|6:156975-23221621|6:156975-46757028|6:156976-170919482|6:163084-1951585|6:163084-2029765|6:163084-9525729|6:164361-13340113|6:165633-170919470|6:168776-24023234|6:255351-3189972|6:302184-3290583;po_P_gain_percent=0.06|0.53|0.06|1.89|2.53|0.67|0.62|1.64|0.57|0.84|0.74|0.72|0.44|0.42|0.21|0.06|5.38|5.15|1.03|0.73|0.06|0.40|3.28|2.01;po_P_loss_source=dbVar:nssv15127418|dbVar:nssv15133557|dbVar:nssv15168254|dbVar:nssv15134981|dbVar:nssv15135893|dbVar:nssv15139184|dbVar:nssv16254736|dbVar:nssv15139679|dbVar:nssv15151182|dbVar:nssv16208808|dbVar:nssv15152915|dbVar:nssv15137052|dbVar:nssv15142299|dbVar:nssv15138353|dbVar:nssv18330309|dbVar:nssv15133558|dbVar:nssv15134713|dbVar:nssv15132439|dbVar:nssv15132039|dbVar:nssv15133559|dbVar:nssv15132182|dbVar:nssv15132440|dbVar:nssv15137716|dbVar:nssv15125242|dbVar:nssv15141126|dbVar:nssv15124398|dbVar:nssv15124411;po_P_loss_coord=6:60524-1768235|6:107683-4979015|6:108667-1505511|6:152635-5315912|6:152635-6027780|6:152635-6290037|6:152850-1888703|6:156975-13856156|6:156975-2030623|6:156975-2208360|6:156975-3398920|6:156975-4907926|6:156975-6417749|6:156975-7122992|6:156976-3718881|6:163084-2724845|6:163084-3459841|6:163084-5875635|6:163084-6063033|6:164634-5823834|6:164634-6284470|6:165676-9036267|6:170427-1622218|6:180960-2180143|6:195230-2117379|6:204010-11608587|6:204010-6447311;po_P_loss_percent=5.63|1.98|6.89|1.86|1.64|1.57|5.54|0.70|5.13|4.69|2.97|2.03|1.54|1.38|2.70|3.76|2.92|1.68|1.63|1.70|1.57|1.08|6.63|4.81|5.01|0.84|1.54;B_gain_source=DDD:19553|DDD:19555|dgv140e203|nsv514340;B_gain_coord=6:230528-373346|6:236002-373603|6:257333-380527|6:257354-382897;B_gain_AFmax=0.6839;B_loss_source=DDD:19555|dbVar|dgv1701e212;B_loss_coord=chr6:180946-734275|6:236002-373603|6:254255-385771;B_loss_AFmax=0.187;po_B_gain_someG_source=6:236002-373603_DDD:19555|6:253364-302293_dgv1695e212|6:256503-293373_dgv1157e214|6:257354-293393_DDD:19561|6:257354-382897_dgv140e203|6:294125-385771_dgv1705e212|6:305182-340601_1000g|6:305182-340601_dgv1158e214|6:327587-368712_1000g|6:344136-379149_DDD:19570;po_B_gain_someG_coord=6:230528-373346_DDD:19553|6:253364-294911_dgv1694e212|6:256503-293373_1000g|6:257333-380527_nsv514340|6:257354-294837_esv2421434|6:259529-339802_TS40:ISCA-37471|6:298701-379015_esv2421645|6:305182-340601_1000g|6:327587-368712_1000g|6:327587-368712_dgv1159e214;po_B_loss_someG_source=6:236002-373603_DDD:19555|6:254255-385771_dgv1701e212|chr6:295586-296060_dbVar|chr6:295710-295782_dbVar|chr6:314312-314882_dbVar|chr6:340942-340994_dbVar|;po_B_loss_someG_coord=chr6:180946-734275_dbVar|6:252694-302294_dgv1693e212|6:259529-339802_HI40:ISCA-37471|6:295586-296060_gnomAD-SV_v2.1_DEL_6_65910|chr6:299088-299161_dbVar|chr6:329960-330054_dbVar|chr6:340943-340994_dbVar;GC_content_left=0.365;GC_content_right=0.315;Repeat_coord_left=6:266156-266836;Repeat_type_left=L1MC3;Repeat_coord_right=6:362320-362381;Repeat_type_right=MIRc;ENCODE_blacklist_left=6:256601-382800;ENCODE_blacklist_characteristics_left=High_Signal_Region;ENCODE_blacklist_right=6:256601-382800;ENCODE_blacklist_characteristics_right=High_Signal_Region;DDD_HI_percent=38.68;ExAC_synZ=-1.35330421932959;ExAC_misZ=-0.982727799381157;NCBI_gene_ID=.,56940;HGNC_gene_ID=.,HGNC:16077;LOEUF_bin=5;GnomAD_pLI=0.0093421;ExAC_pLI=0.0043071;AnnotSV_ranking_score=-1;AnnotSV_ranking_criteria=1A_(cf_Gene_count,_RE_gene,_+0.00)|2F/4O_(cf_B_loss_source,_-1.00)|2B_(cf_po_P_loss_source,_HI,_OMIM_morbid,_+0.00|3A_(1_gene,_+0.00)|5F_(+0.00);ACMG_class=1,full=1;END=362290;SVLEN=-96211\tGT\t1/.\n6\t29854871\t.\tG\t<DEL>\t.\tPASS\tAnnotSV_ID=6_29854871_29896710_DEL_1;SV_start=29854871;Biologist_ranking=Benign;Annotation_mode=full,split,split;CytoBand=p22.1;Gene_name=HLA-H|HCG4B,HLA-H,HCG4B;Closest_left=HCP5B;Closest_right=HLA-A;Gene_count=2;Tx=.,NR_001434,NR_001317;Tx_version=.,4,3;Tx_start=.,29855349,29892368;Tx_end=.,29858856,29894992;Overlapped_tx_length=.,3507,2624;Overlapped_CDS_length=.,0,0;Overlapped_CDS_percent=.,0,0;Exon_count=.,8,1;Location=.,txStart-txEnd,txStart-txEnd;Location2=.,UTR,UTR;Intersect_start=.,29855349,29892368;Intersect_end=.,29858856,29894992;RE_gene=GABBR1_(morbid/RE=EA_enhancer)|ZFP57_(morbid/RE=EA_enhancer+GH_enhancer+GH_promoter_enhancer);P_loss_source=morbid:HLA-H,morbid:HLA-H,.;P_loss_coord=6:29855350-29858856,6:29855350-29858856,.;po_P_gain_source=dbVar:nssv15166690|dbVar:nssv15166692|dbVar:nssv15161578|dbVar:nssv15161859|nssv15161868|dbVar:nssv15168255|dbVar:nssv15148873|dbVar:nssv15606075;po_P_gain_coord=6:60108-171054786|6:108667-170980171|6:156975-46757028|6:156976-170919482|6:165633-170919470|6:3224545-30624967|6:29455466-81447367;po_P_gain_percent=0.02|0.02|0.09|0.02|0.02|0.15|0.08;po_P_loss_source=dbVar:nssv17955655;po_P_loss_coord=6:28005013-31683185;po_P_loss_percent=1.14;B_gain_source=DDD:20149|IMH;B_gain_coord=6:29698616-29950994|6:29722846-29947201|6:29723410-29948590|6:29733227-29961287|6:29760864-29916953|6:29762617-29919277|6:29767291-29923611|6:29767394-29923982|6:29771866-29927541|6:29840747-29917149,6:29698616-29950994|6:29722846-29947201|6:29723410-29948590|6:29733227-29961287|6:29760864-29916953|6:29762617-29919277|6:29767291-29923611|6:29767394-29923982|6:29769716-29865367|6:29771866-29927541|6:29773145-29867669|6:29777143-29871794|6:29778441-29873573|6:29840747-29917149,6:29698616-29950994|6:29722846-29947201|6:29723410-29948590|6:29733227-29961287|6:29760864-29916953|6:29762617-29919277|6:29767291-29923611|6:29767394-29923982|6:29771866-29927541|6:29840747-29917149;B_gain_AFmax=0.1073;B_loss_source=1000g|DDD:20139|DDD:20142|DDD:20149|DDD:20154|IMH|dbVar|dgv1087e199|dgv7e195|esv2761013|esv2763941|esv3608493,1000g|DDD:20139|DDD:20142|DDD:20149|DDD:20154|IMH|dbVar|dgv1087e199|dgv1726e212|dgv7e195|esv2422126|esv2761013|esv2763941|esv3608493,1000g|DDD:20139|DDD:20142|DDD:20149|DDD:20154|DDD:20157|IMH|dbVar|dgv1087e199|dgv1089e199|dgv1734e212|dgv7e195|esv2761013|esv2763941|esv3608493;B_loss_coord=6:29745199-29961072|6:29805446-29928380|6:29836637-29921127|6:29837073-29937311|6:29840747-29917149|6:29842746-29916111|6:29851122-29905999|chr6:29851172-29904515|6:29851173-29904515|6:29851173-29904515|6:29851444-29899493|6:29853315-29914786,6:29745199-29961072|6:29805446-29928380|6:29829109-29874629|6:29836637-29921127|6:29837073-29937311|6:29840747-29917149|6:29842746-29916111|6:29851122-29905999|chr6:29851172-29904515|6:29851173-29904515|6:29851173-29904515|6:29851444-29865718|6:29851444-29899493|6:29853315-29914786,6:29745199-29961072|6:29805446-29928380|6:29836637-29921127|6:29837073-29937311|6:29840747-29917149|6:29842746-29916111|6:29851122-29905999|chr6:29851172-29904515|6:29851173-29904515|6:29851173-29904515|6:29851444-29899493|6:29853315-29914786|6:29861152-29916006|6:29864510-29936194|6:29890896-29906192|6:29891102-29906000;B_loss_AFmax=0.4519;B_inv_source=IMH;B_inv_coord=6:26743912-58149585|6:26745294-58149309;B_inv_AFmax=0.3871;po_B_gain_someG_source=6:29722846-29947201_IMH|6:29733227-29961287_IMH|6:29762617-29919277_IMH|6:29767394-29923982_IMH|6:29771866-29927541_IMH|6:29777143-29871794_IMH|6:29840747-29917149_DDD:20149;po_B_gain_someG_coord=6:29698616-29950994_IMH|6:29723410-29948590_IMH|6:29760864-29916953_IMH|6:29767291-29923611_IMH|6:29769716-29865367_IMH|6:29773145-29867669_IMH|6:29778441-29873573_IMH;po_B_loss_someG_source=6:29805446-29928380_DDD:20142|6:29836637-29921127_esv2763941|6:29840747-29917149_DDD:20149|6:29851122-29905999_IMH|6:29851173-29904515_1000g|6:29851444-29865718_esv2422126|6:29853315-29914786_DDD:20154|6:29861152-29916006_IMH|6:29864510-29936194_dgv1734e212|6:29890896-29906192_dgv1089e199|6:29892561-29905834_HI40:ISCA-46607;po_B_loss_someG_coord=6:29745199-29961072_DDD:20139|6:29829109-29874629_dgv1726e212|6:29837073-29937311_esv2761013|6:29842746-29916111_dgv1087e199|chr6:29851172-29904515_dbVar|6:29851173-29904515_esv3608493|6:29851444-29899493_dgv7e195|6:29859518-29886164_dgv740n27|6:29864510-29889669_dgv1732e212|6:29873934-29890069_nsv515032|6:29891102-29906000_DDD:20157;GC_content_left=0.375;GC_content_right=0.51;SegDup_left=6:29842025-29863148;NCBI_gene_ID=.,3136,80868;HGNC_gene_ID=.,HGNC:4965,HGNC:22919;OMIM_morbid=yes,yes,.;AnnotSV_ranking_score=1;AnnotSV_ranking_criteria=1A_(cf_Gene_count,_RE_gene,_+0.00)|2A_(cf_P_loss_source,_+1.00)|3A_(2_genes,_+0.00)|5F_(+0.00);ACMG_class=5,full=5,full=5;END=29896710;SVLEN=-41840\tGT\t1/.\n6\t78979173\t.\tG\t<DEL>\t.\tPASS\tAnnotSV_ID=6_78979173_79023328_DEL_1;SV_start=78979173;Biologist_ranking=Benign;Annotation_mode=full;CytoBand=q14.1;Closest_left=MEI4;Closest_right=MIR10524;Gene_count=0;po_P_gain_source=dbVar:nssv15166690|dbVar:nssv15166692|dbVar:nssv15161859|nssv15161868|dbVar:nssv15168255|dbVar:nssv15606075|dbVar:nssv17970109|dbVar:nssv15148895;po_P_gain_coord=6:60108-171054786|6:108667-170980171|6:156976-170919482|6:165633-170919470|6:29455466-81447367|6:69938253-94379210|6:75092524-142361637;po_P_gain_percent=0.03|0.03|0.03|0.03|0.08|0.18|0.07;po_P_loss_source=dbVar:nssv17976865|dbVar:nssv15138420|dbVar:nssv17957115|dbVar:nssv17956905|dbVar:nssv15154430|dbVar:nssv16255333|dbVar:nssv15139907|dbVar:nssv16215036;po_P_loss_coord=6:64954688-79581678|6:65259549-84136510|6:70165297-79920769|6:72799055-83275894|6:73674613-84829774|6:74226560-80208037|6:76635917-93420511|6:78562076-79746800;po_P_loss_percent=0.30|0.23|0.45|0.42|0.40|0.74|0.26|3.73;B_gain_source=DDD:21366|dgv768n27|nsv516597;B_gain_coord=6:78848098-79052702|6:78950789-79066065|6:78973202-79031742;B_gain_AFmax=0.3704;B_loss_source=1000g|DDD:21366|DDD:21369|DDD:21373|IMH|dbVar|dgv10802n54|dgv1137e199|dgv1810e212|dgv1811e212|dgv6030n100|dgv6037n100|dgv766n27|dgv767n27|dgv769n27|esv2422170|esv2760997|esv2763987|esv3609657|esv3609663|esv3890888|gnomAD-SV_v2.1_DEL_6_70839|nsv514376|nsv516597;B_loss_coord=6:78836835-79051952|6:78848098-79052702|chr6:78892808-79053430|6:78892809-79053430|6:78892809-79053430|6:78950789-79066065|6:78961945-79041809|6:78962294-79041760|6:78962541-79031742|6:78962541-79052702|6:78962582-79027502|6:78962582-79041797|chr6:78962843-79034588|6:78965526-79033478|chr6:78967097-79036275|6:78967098-79036275|6:78967098-79036275|6:78967173-79036477|chr6:78967187-79036419|6:78967187-79036419|6:78967195-79036475|6:78967195-79036497|6:78969054-79027758|6:78969066-79031970|6:78969066-79035185|6:78972098-79031153|6:78972931-79033478|6:78973202-79031742;B_loss_AFmax=0.4631;B_inv_source=IMH;B_inv_coord=6:49889718-107723757;B_inv_AFmax=0.1414;po_B_gain_someG_source=6:78950789-79066065_DDD:21366|6:78973202-79031742_dgv768n27|;po_B_gain_someG_coord=6:78848098-79052702_nsv516597|6:78963972-78992918_DDD:21367|6:78999918-79033124_DDD:21375;po_B_loss_someG_source=6:78848098-79052702_nsv516597|6:78892809-79053430_1000g|6:78950789-79066065_DDD:21366|6:78962294-79041760_dgv1810e212|6:78962541-79052702_dgv767n27|6:78962582-79041797_dgv6030n100|6:78965526-79033478_esv3890888|6:78967098-79036275_1000g|6:78967173-79036477_IMH|6:78967187-79036419_gnomAD-SV_v2.1_DEL_6_70839|6:78967195-79036497_dgv1137e199|6:78969066-79031970_DDD:21373|6:78972098-79031153_nsv514376|6:78973202-79031742_dgv769n27;po_B_loss_someG_coord=6:78836835-79051952_esv2760997|chr6:78892808-79053430_dbVar|6:78892809-79053430_esv3609657|6:78961945-79041809_esv2763987|6:78962541-79031742_dgv766n27|6:78962582-79027502_dgv1811e212|chr6:78962843-79034588_dbVar|chr6:78967097-79036275_dbVar|6:78967098-79036275_esv3609663|chr6:78967187-79036419_dbVar|6:78967195-79036475_DDD:21369|6:78969054-79027758_dgv6037n100|6:78969066-79035185_esv2422170|6:78972931-79033478_dgv10802n54;GC_content_left=0.325;GC_content_right=0.27;AnnotSV_ranking_score=-1.6;AnnotSV_ranking_criteria=1B_(cf_Gene_count,_RE_gene,_-0.60)|2F/4O_(cf_B_loss_source,_-1.00)|2B_(cf_po_P_loss_source,_HI,_OMIM_morbid,_+0.00|3A_(0_gene,_+0.00)|5F_(+0.00);ACMG_class=1;END=79023328;SVLEN=-44156\tGT\t1/.\n7\t33397468\t.\tC\t<DEL>\t.\tPASS\tAnnotSV_ID=7_33397468_33397607_DEL_1;SV_start=33397468;Biologist_annotation=BBS9_inframe;Biologist_ranking=Pathogenic;Annotation_mode=full,split;CytoBand=p14.3;Gene_name=BBS9;Closest_left=RP9;Closest_right=FLJ20712;Gene_count=1;Tx=.,NM_001348036;Tx_version=.,1;Tx_start=.,33168896;Tx_end=.,33645680;Overlapped_tx_length=.,140;Overlapped_CDS_length=.,140;Overlapped_CDS_percent=.,5;Frameshift=.,yes;Exon_count=.,23;Location=.,exon16-intron16;Location2=.,CDS;Dist_nearest_SS=.,0;Nearest_SS_type=.,5';Intersect_start=.,33397467;Intersect_end=.,33397607;po_P_gain_source=dbVar:nssv15777247|dbVar:nssv15168013|dbVar:nssv15161666|nssv15161679|dbVar:nssv15168014|dbVar:nssv15161745|dbVar:nssv15161726|dbVar:nssv17970196|dbVar:nssv15161869|dbVar:nssv15161632|dbVar:nssv17970205|dbVar:nssv15133397|dbVar:nssv15154527|dbVar:nssv15146465;po_P_gain_coord=7:10366-159119707|7:10705-159122532|7:43362-159119707|7:44936-159126310|7:54186-37129317|7:54186-41915483|7:10745751-35305167|7:11048841-52863626|7:11562625-36395416|7:27507833-39072473|7:30460550-34600277|7:30463887-43470805|7:33367925-61831899;po_P_gain_percent=0.00|0.00|0.00|0.00|0.00|0.00|0.00|0.00|0.00|0.00|0.00|0.00|0.00;po_P_loss_phen=Bardet-Biedl_syndrome_9,_615986_(3)_AR;po_P_loss_source=dbVar:nssv15161318|dbVar:nssv17976840|dbVar:nssv18329275|dbVar:nssv15138559|dbVar:nssv15147510|dbVar:nssv15148432|morbid:BBS9|dbVar:nssv17971381|dbVar:nssv18790316|dbVar:nssv18790317;po_P_loss_coord=7:54186-159075079|7:25451741-33864069|7:27133787-34466477|7:30977986-33440608|7:32718004-41084581|7:32911004-44576005|7:33169176-33675379|7:33296829-33427776|7:33376034-33427776|7:33388661-33397627;po_P_loss_percent=0.00|0.00|0.00|0.01|0.00|0.00|0.03|0.11|0.27|1.56;P_snvindel_nb=2;P_snvindel_phen=Bardet-Biedl_syndrome|Bardet-Biedl_syndrome_9;B_inv_source=IMH;B_inv_coord=7:23891013-65526751|7:33013222-55782515;B_inv_AFmax=0.381;GC_content_left=0.325;GC_content_right=0.37;DDD_HI_percent=17.13;ExAC_delZ=-2.43637392050626;ExAC_dupZ=-2.53125239294469;ExAC_cnvZ=-2.47162789907313;ExAC_synZ=-0.989035894351638;ExAC_misZ=-1.15018109964609;GenCC_disease=.,Bardet-Biedl_syndrome|Bardet-Biedl_syndrome_9|ciliopathy;GenCC_moi=.,AR;GenCC_classification=.,Definitive|Strong|Supportive;GenCC_pmid=.,16380913|20177705|20301537[PMID]|21209035|250490|251248|268436|282550;NCBI_gene_ID=.,27241;HGNC_gene_ID=.,HGNC:30000;OMIM_ID=607968;OMIM_phenotype=.,Bardet-Biedl_syndrome_9,_615986_(3)_AR;OMIM_inheritance=.,AR;OMIM_morbid=yes;LOEUF_bin=4;GnomAD_pLI=4.2117e-17;ExAC_pLI=6.3752e-10;AnnotSV_ranking_score=0.9;AnnotSV_ranking_criteria=1A_(cf_Gene_count,_RE_gene,_+0.00)|2E-1_(BBS9,_+0.90)|3A_(1_gene,_+0.00)|5F_(+0.00);ACMG_class=4,full=4;END=33397607;SVLEN=-140\tGT\t1/.\n7\t38296177\t.\tG\t<DEL>\t.\tPASS\tAnnotSV_ID=7_38296177_38352444_DEL_1;SV_start=38296177;Biologist_ranking=Benign;Annotation_mode=full,split;CytoBand=p14.1;Gene_name=TARP;Closest_left=STARD3NL;Closest_right=TRG-AS1;Gene_count=1;Tx=.,NM_001003806;Tx_version=.,2;Tx_start=.,38299243;Tx_end=.,38313237;Overlapped_tx_length=.,13994;Overlapped_CDS_length=.,336;Overlapped_CDS_percent=.,100;Frameshift=.,no;Exon_count=.,4;Location=.,txStart-txEnd;Location2=.,5'UTR-3'UTR;Intersect_start=.,38299243;Intersect_end=.,38313237;RE_gene=SFRP4_(morbid/RE=ABC_enhancer)|VPS41_(morbid/RE=ABC_enhancer);po_P_gain_source=dbVar:nssv15777247|dbVar:nssv15168013|dbVar:nssv15161666|nssv15161679|dbVar:nssv15168014|dbVar:nssv15161726|dbVar:nssv15161869|dbVar:nssv17970205|dbVar:nssv15154527|dbVar:nssv15146465|dbVar:nssv15166972;po_P_gain_coord=7:10366-159119707|7:10705-159122532|7:43362-159119707|7:44936-159126310|7:54186-41915483|7:11048841-52863626|7:27507833-39072473|7:30463887-43470805|7:33367925-61831899|7:37213109-40255122;po_P_gain_percent=0.04|0.04|0.04|0.04|0.13|0.13|0.49|0.43|0.20|1.85;po_P_loss_source=dbVar:nssv15161318|dbVar:nssv15147510|dbVar:nssv15148432|dbVar:nssv15147453|dbVar:nssv15145850|dbVar:nssv15148950;po_P_loss_coord=7:54186-159075079|7:32718004-41084581|7:32911004-44576005|7:35500387-42053399|7:37343083-48700334|7:38217602-45343699;po_P_loss_percent=0.04|0.67|0.48|0.86|0.50|0.79;B_gain_source=dgv1888e212;B_gain_coord=7:38286516-38394857;B_gain_AFmax=0.01;B_loss_source=.,dbVar;B_loss_coord=.,chr7:38295995-38331222;B_loss_AFmax=.,0.01;B_inv_source=IMH;B_inv_coord=7:23891013-65526751|7:33013222-55782515;B_inv_AFmax=0.381;po_B_gain_someG_source=7:38286516-38394857_dgv1888e212;po_B_gain_someG_coord=7:38283523-38309532_DDD:23873;po_B_loss_someG_source=chr7:38309816-38312727_dbVar|chr7:38312421-38313034_dbVar|chr7:38318010-38318532_dbVar|chr7:38321639-38325867_dbVar|chr7:38325667-38325867_dbVar|chr7:38325667-38328166_dbVar|chr7:38331989-38335441_dbVar|chr7:38331989-38336295_dbVar|chr7:38348388-38349972_dbVar;po_B_loss_someG_coord=chr7:38295995-38331222_dbVar|chr7:38309816-38313034_dbVar|chr7:38315910-38331224_dbVar|chr7:38321639-38325667_dbVar|chr7:38321639-38326916_dbVar|chr7:38325667-38327016_dbVar|chr7:38325867-38328166_dbVar|chr7:38331989-38335610_dbVar|chr7:38335441-38335779_dbVar;GC_content_left=0.365;GC_content_right=0.32;Repeat_coord_left=7:38296252-38296527;Repeat_type_left=AluSx;SegDup_left=7:38284220-38298557;AnnotSV_ranking_score=0;AnnotSV_ranking_criteria=1A_(cf_Gene_count,_RE_gene,_+0.00)|2B_(cf_po_P_loss_source,_HI,_OMIM_morbid,_+0.00|2G_(cf_po_B_loss_someG_source,_+0.00)|3A_(1_gene,_+0.00)|5F_(+0.00);ACMG_class=3,full=3;END=38352444;SVLEN=-56268\tGT\t1/.\n7\t72726579\t.\tT\t<DEL>\t.\tPASS\tAnnotSV_ID=7_72726579_74139390_DEL_1;SV_start=72726579;Biologist_annotation=Williams_syndrom;Biologist_ranking=Pathogenic;Annotation_mode=full,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split;CytoBand=q11.23;Gene_name=TRIM50|FKBP6|FZD9|BAZ1B|BCL7B|TBL2|MLXIPL|VPS37D|DNAJC30|BUD23|STX1A|MIR4284|BICDL3P|ABHD11|CLDN3|CLDN4|METTL27|TMEM270|ELN|ELN-AS1|LIMK1|EIF4H|MIR590|LAT2|RFC2|CLIP2|GTF2IRD1|MIR10525|GTF2I|GTF2I-AS1,TRIM50,FKBP6,FZD9,BAZ1B,BCL7B,TBL2,MLXIPL,VPS37D,DNAJC30,BUD23,STX1A,MIR4284,BICDL3P,ABHD11,CLDN3,CLDN4,METTL27,TMEM270,ELN,ELN-AS1,LIMK1,EIF4H,MIR590,LAT2,RFC2,CLIP2,GTF2IRD1,MIR10525,GTF2I,GTF2I-AS1;Closest_left=NSUN5;Closest_right=NCF1;Gene_count=30;Tx=.,NM_178125,NM_003602,NM_003508,NM_001370402,NM_001301061,NM_012453,NM_032951,NM_001077621,NM_032317,NM_001202560,NM_004603,NR_036247,NR_026690,NM_148912,NM_001306,NM_001305,NM_152559,NM_182504,NM_001278939,NR_183555,NM_002314,NM_022170,NR_030321,NM_014146,NM_181471,NM_003388,NM_001199207,NR_162116,NM_032999,NR_110044;Tx_version=.,3,5,3,1,2,4,3,2,3,3,4,1,1,4,4,5,3,4,2,1,4,2,1,4,3,5,2,1,4,1;Tx_start=.,72726531,72742163,72848107,72854735,72950685,72981866,73007531,73082160,73095247,73097926,73113539,73125646,73149398,73150423,73183326,73245325,73248919,73275488,73442502,73473234,73498133,73588685,73605527,73624335,73645831,73703736,73868235,74010294,74072043,74103270;Tx_end=.,72742085,72772634,72850450,72936623,72972020,72992909,73038852,73086440,73097783,73112542,73133999,73125727,73150330,73153132,73184600,73247020,73256846,73280220,73484237,73476610,73536855,73611426,73605624,73644164,73668729,73820265,74016931,74010353,74175022,74143256;Overlapped_tx_length=.,15507,30471,2343,81888,21335,11043,31321,4280,2536,14616,20460,81,932,2709,1274,1695,7927,4732,41735,3376,38722,22741,97,19829,22898,116529,148696,59,67347,36120;Overlapped_CDS_length=.,1464,984,1776,4452,642,1344,2559,756,681,897,867,0,0,921,663,630,738,798,2361,0,1944,747,0,732,1065,3141,2931,0,943,0;Overlapped_CDS_percent=.,100,100,84,100,100,100,100,100,95,100,100,0,0,100,75,42,100,100,100,0,100,100,0,100,100,100,100,0,31,0;Frameshift=.,no,no,no,no,no,no,no,no,no,no,no,.,.,no,no,no,no,no,no,.,no,no,.,no,no,no,no,.,yes,.;Exon_count=.,7,9,1,19,7,7,17,4,1,13,10,1,4,6,1,1,6,3,34,2,16,7,1,13,11,17,27,1,35,4;Location=.,txStart-exon7,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-intron12,intron2-txEnd;Location2=.,5'UTR-3'UTR,5'UTR-3'UTR,5'UTR-3'UTR,5'UTR-3'UTR,5'UTR-3'UTR,5'UTR-3'UTR,5'UTR-3'UTR,5'UTR-3'UTR,5'UTR-3'UTR,5'UTR-3'UTR,5'UTR-3'UTR,UTR,UTR,5'UTR-3'UTR,5'UTR-3'UTR,5'UTR-3'UTR,5'UTR-3'UTR,5'UTR-3'UTR,5'UTR-3'UTR,UTR,5'UTR-3'UTR,5'UTR-3'UTR,UTR,5'UTR-3'UTR,5'UTR-3'UTR,5'UTR-3'UTR,5'UTR-3'UTR,UTR,5'UTR-CDS,UTR;Dist_nearest_SS=.,928,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,3733,2349;Nearest_SS_type=.,3',.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,3',5';Intersect_start=.,72726578,72742163,72848107,72854735,72950685,72981866,73007531,73082160,73095247,73097926,73113539,73125646,73149398,73150423,73183326,73245325,73248919,73275488,73442502,73473234,73498133,73588685,73605527,73624335,73645831,73703736,73868235,74010294,74072043,74103270;Intersect_end=.,72742085,72772634,72850450,72936623,72972020,72992909,73038852,73086440,73097783,73112542,73133999,73125727,73150330,73153132,73184600,73247020,73256846,73280220,73484237,73476610,73536855,73611426,73605624,73644164,73668729,73820265,74016931,74010353,74139390,74139390;RE_gene=ACOX1_(morbid/RE=mTL_miRNA)|AGO2_(morbid/RE=mTL_miRNA)|AGTPBP1_(morbid/RE=mTL_miRNA)|AHR_(morbid/RE=mTL_miRNA)|AKR1D1_(morbid/RE=mTL_miRNA)|ALDH6A1_(morbid/RE=mTL_miRNA)|ALDOA_(morbid/RE=mTL_miRNA)|APC_(HI=3/morbid/RE=mTL_miRNA)|APTX_(morbid/RE=mTL_miRNA)|ARSK_(morbid/RE=mTL_miRNA)|ATL3_(morbid/RE=mTL_miRNA)|ATP13A3_(morbid/RE=mTL_miRNA)|ATP6V0A2_(morbid/RE=mTL_miRNA)|ATP6V1A_(morbid/RE=mTL_miRNA)|ATXN1_(morbid/RE=mTL_miRNA)|BACH1_(morbid/RE=mTL_miRNA)|BVES_(morbid/RE=mTL_miRNA)|C3_(morbid/RE=mTL_miRNA)|CAPN15_(morbid/RE=mTL_miRNA)|CASP10_(morbid/RE=mTL_miRNA)|CD3D_(morbid/RE=mTL_miRNA)|CDC73_(HI=3/morbid/RE=mTL_miRNA)|CDKN1B_(HI=3/morbid/RE=mTL_miRNA)|CHRNB1_(morbid/RE=mTL_miRNA)|CIAO1_(morbid/RE=mTL_miRNA)|CISD2_(morbid/RE=mTL_miRNA)|CITED2_(morbid/RE=mTL_miRNA)|CLEC7A_(morbid/RE=mTL_miRNA)|CLN8_(morbid/RE=mTL_miRNA)|COL18A1_(morbid/RE=mTL_miRNA)|COX20_(morbid/RE=mTL_miRNA)|COX6B1_(morbid/RE=mTL_miRNA)|CPE_(morbid/RE=mTL_miRNA)|CPT1A_(morbid/RE=mTL_miRNA)|CRIPT_(morbid/RE=mTL_miRNA)|CRTAP_(morbid/RE=mTL_miRNA)|CSNK1D_(morbid/RE=mTL_miRNA)|CTSB_(morbid/RE=mTL_miRNA)|CYCS_(morbid/RE=mTL_miRNA)|DARS2_(morbid/RE=mTL_miRNA)|DBR1_(morbid/RE=mTL_miRNA)|DNA2_(morbid/RE=mTL_miRNA)|DNAAF3_(morbid/RE=mTL_miRNA)|DNAJB13_(morbid/RE=mTL_miRNA)|DNAJC3_(morbid/RE=mTL_miRNA)|DSG3_(morbid/RE=mTL_miRNA)|EDARADD_(morbid/RE=mTL_miRNA)|EIF2S3_(morbid/RE=mTL_miRNA)|EIF4A2_(morbid/RE=mTL_miRNA)|ELP2_(morbid/RE=mTL_miRNA)...;P_gain_source=dbVar:nssv15146175|nssv15148276|dbVar:nssv15146450|dbVar:nssv15147327|dbVar:nssv17955524|dbVar:nssv17976654;P_gain_coord=7:72766114-74133473|7:72766313-74133327|7:72766314-74042787|7:72766314-74133332|7:73944169-74138459;P_loss_phen=Cutis_laxa,_AD,_123700_(3)_AD|Supravalvar_aortic_stenosis,_185500_(3)_AD|Leber-like_hereditary_optic_neuropathy,_AR_1,_619382_(3)_AR|Spermatogenic_failure_77,_620103_(3)_AR,.,Spermatogenic_failure_77,_620103_(3)_AR,.,.,.,.,.,.,Leber-like_hereditary_optic_neuropathy,_AR_1,_619382_(3)_AR,.,.,.,.,.,.,.,.,.,Cutis_laxa,_AD,_123700_(3)_AD|Supravalvar_aortic_stenosis,_185500_(3)_AD,.,.,.,.,.,.,.,.,.,.,.;P_loss_source=HI3:ELN|dbVar:nssv15128343|dbVar:nssv15128578|dbVar:nssv15130113|dbVar:nssv15130169|dbVar:nssv15140244|dbVar:nssv15141480|dbVar:nssv15145649|nssv15146804|nssv15153080|dbVar:nssv15146451|dbVar:nssv15146687|dbVar:nssv15146708|dbVar:nssv15151951|nssv15605841|dbVar:nssv15167740|dbVar:nssv15770120|dbVar:nssv16208140|dbVar:nssv16213814|dbVar:nssv16214480|dbVar:nssv16214500|dbVar:nssv17172745|dbVar:nssv17172746|dbVar:nssv17955650|dbVar:nssv17971140|dbVar:nssv18786274|dbVar:nssv18791884|dbVar:nssv18791887|morbid:DNAJC30|morbid:ELN|morbid:FKBP6,.,morbid:FKBP6,.,.,.,.,.,.,morbid:DNAJC30,.,.,.,.,.,.,.,.,.,HI3:ELN|dbVar:nssv15128578|dbVar:nssv15770120|dbVar:nssv16214480|dbVar:nssv16214500|dbVar:nssv17172746|dbVar:nssv17971140|dbVar:nssv18786274|dbVar:nssv18791884|dbVar:nssv18791887|morbid:ELN,.,.,.,.,.,.,.,.,.,.,.;P_loss_coord=7:72726579-74139390|7:72742164-72772634|7:72766114-74133473|7:72766313-74133327|7:72766314-74133332|7:72772523-74133319|7:72996565-73597315|7:73023063-73524207|7:73095248-73097783|7:73150890-73604636|7:73187644-73501025|7:73442120-73484237|7:73442459-73483087|7:73442499-73442619|7:73442499-73483050|7:73442503-73484237|7:73442504-73484237|7:73442509-73483040|7:73442519-73449764|7:73442519-73483030|7:73444331-73476493|7:73449675-73483050|7:73461986-73483030|7:73470471-73498327|7:73471703-73483040|7:73482968-73483050|7:73482988-73484237|7:73791726-74133273,.,7:72742164-72772634,.,.,.,.,.,.,7:73095248-73097783,.,.,.,.,.,.,.,.,.,7:73442503-73484237|7:73442504-73484237|7:73442509-73483040|7:73442519-73449764|7:73442519-73483030|7:73444331-73476493|7:73449675-73483050|7:73461986-73483030|7:73471703-73483040|7:73482968-73483050|7:73482988-73484237,.,.,.,.,.,.,.,.,.,.,.;po_P_gain_phen=7q11.23_recurrent_(Williams-Beuren_syndrome)_region_(includes_ELN);po_P_gain_source=dbVar:nssv15777247|dbVar:nssv15168013|dbVar:nssv15161666|nssv15161679|dbVar:nssv15168014|dbVar:nssv15146013|dbVar:nssv15146778|dbVar:nssv15147714|dbVar:nssv15147012|dbVar:nssv15147013|dbVar:nssv15755212|dbVar:nssv15147334|dbVar:nssv15151509|dbVar:nssv15154519|dbVar:nssv15152109|dbVar:nssv15153678|dbVar:nssv15148173|dbVar:nssv15149887|dbVar:nssv15147399|dbVar:nssv15148904|dbVar:nssv15174166|dbVar:nssv15128409|dbVar:nssv15150793|dbVar:nssv16254014|dbVar:nssv15148877|dbVar:nssv18830985|dbVar:nssv15147014|dbVar:nssv15149513|dbVar:nssv15146773|dbVar:nssv15151227|dbVar:nssv15147017|dbVar:nssv15146395|dbVar:nssv15147458|dbVar:nssv15126184|dbVar:nssv17976854|dbVar:nssv15150228|dbVar:nssv15147556|dbVar:nssv15146449|dbVar:nssv15151508|dbVar:nssv15150733|dbVar:nssv15154518|dbVar:nssv17955880|dbVar:nssv18830970|dbVar:nssv15146933|dbVar:nssv16215249|dbVar:nssv15167739|TS3:ISCA-37392|dbVar:nssv15148970;po_P_gain_coord=7:10366-159119707|7:10705-159122532|7:43362-159119707|7:44936-159126310|7:62437464-75044630|7:71644078-78793387|7:71968213-74133332|7:72196406-74991125|7:72233836-74285345|7:72364527-73780265|7:72408603-74193374|7:72576873-74175429|7:72577022-74147166|7:72577022-74197846|7:72577022-74859638|7:72589516-74154603|7:72589516-74165401|7:72606410-74193403|7:72606410-74300084|7:72606451-74153206|7:72650008-74188572|7:72659675-74143240|7:72659675-74164894|7:72663963-74193403|7:72664462-74162586|7:72665463-74139573|7:72677174-74143140|7:72677302-74143060|7:72677302-74143240|7:72679398-74139573|7:72683245-74267189|7:72685735-74142327|7:72685764-74189674|7:72686959-74155067|7:72692113-74154497|7:72700128-74146858|7:72700415-74139573|7:72700525-74069858|7:72700525-74142256|7:72701019-74143240|7:72717346-74133310|7:72718278-74142256|7:72718279-74140708|7:72722982-74141840|7:72743984-74145064|7:72744456-74142510|7:72766314-74481540;po_P_gain_percent=0.89|0.89|0.89|0.89|11.21|19.76|64.97|50.55|68.87|74.43|79.16|88.38|89.98|87.17|61.89|90.27|89.65|89.02|83.42|91.34|91.83|95.23|93.86|92.37|94.31|95.84|96.37|96.39|96.38|96.76|89.20|96.99|93.94|96.23|96.61|97.66|98.17|98.10|97.99|97.96|99.35|99.22|99.32|99.57|99.60|99.78|80.05;po_P_loss_phen=7q11.23_recurrent_(Williams-Beuren_syndrome)_region_(includes_ELN);po_P_loss_source=dbVar:nssv15161318|dbVar:nssv15148211|dbVar:nssv15147057|dbVar:nssv15147200|dbVar:nssv16255682|dbVar:nssv15146320|dbVar:nssv15146676|dbVar:nssv16867365|dbVar:nssv15167734|dbVar:nssv15146211|dbVar:nssv16254015|dbVar:nssv15151112|dbVar:nssv15145801|dbVar:nssv15152099|dbVar:nssv17977008|dbVar:nssv15151511|dbVar:nssv17977009|dbVar:nssv15145887|dbVar:nssv15147427|dbVar:nssv15153677|dbVar:nssv15154521|dbVar:nssv16208139|dbVar:nssv15145827|dbVar:nssv15148206|dbVar:nssv15151289|dbVar:nssv18330757|dbVar:nssv15125131|dbVar:nssv17977011|dbVar:nssv15167735|dbVar:nssv15148192|dbVar:nssv15167736|dbVar:nssv15168977|dbVar:nssv18330770|dbVar:nssv16215159|dbVar:nssv15129678|dbVar:nssv15147158|dbVar:nssv15606134|dbVar:nssv15145898|dbVar:nssv15151092|dbVar:nssv15755220|dbVar:nssv17977017|dbVar:nssv15147160|dbVar:nssv15147159|dbVar:nssv15145802|dbVar:nssv15147457|dbVar:nssv15148226|dbVar:nssv15147515|dbVar:nssv15147502|dbVar:nssv15148195|dbVar:nssv15147550|dbVar:nssv17977015|dbVar:nssv15605840|dbVar:nssv17977014|dbVar:nssv15149859|dbVar:nssv17977016|dbVar:nssv15150016|dbVar:nssv15146951|dbVar:nssv16297072|dbVar:nssv18830737|dbVar:nssv15154517|nssv17977012|dbVar:nssv17977007|dbVar:nssv15146637|dbVar:nssv15149107|dbVar:nssv15150231|dbVar:nssv15150699|dbVar:nssv15150637|dbVar:nssv15151346|dbVar:nssv15148257|nssv17977121|dbVar:nssv15150643|dbVar:nssv15149860|dbVar:nssv15151090|dbVar:nssv18329614|dbVar:nssv18330419|dbVar:nssv18330223|dbVar:nssv15167737|dbVar:nssv15605774|dbVar:nssv8640006|dbVar:nssv15167738|dbVar:nssv15147726|dbVar:nssv15755221|HI3:ISCA-37392|dbVar:nssv15605838|dbVar:nssv15605839|dbVar:nssv15147324|dbVar:nssv15147329|dbVar:nssv15145670|dbVar:nssv15145679|nssv15146800|dbVar:nssv15146612|dbVar:nssv17977013|dbVar:nssv15124428|dbVar:nssv15776001|dbVar:nssv15120782|dbVar:nssv15148954|dbVar:nssv15147202;po_P_loss_coord=7:54186-159075079|7:62196743-75061986|7:68133295-72806397|7:68847340-77453149|7:68977231-73939510|7:70690331-81364973|7:70926113-72806397|7:71847969-73391310|7:72305672-74196360|7:72401087-74285345|7:72403118-76709600|7:72456605-76007380|7:72507130-74142327|7:72536981-74629034|7:72589196-74225562|7:72589516-74386749|7:72589516-74629034|7:72606410-74193403|7:72606410-74285345|7:72608515-74386749|7:72612043-74574641|7:72621723-76007380|7:72636007-74339014|7:72637825-74203685|7:72643632-74142190|7:72643633-74143060|7:72644632-74144422|7:72645014-74142190|7:72650107-74138603|7:72650121-74142256|7:72650266-74138603|7:72653307-74134911|7:72654783-74142190|7:72657229-74160300|7:72677238-74144422|7:72681398-74137354|7:72682339-74141250|7:72685735-74142327|7:72691243-74142190|7:72699383-74142329|7:72700128-74142190|7:72700415-74122179|7:72700415-74137354|7:72700415-74139573|7:72700415-74142327|7:72700415-74172913|7:72700415-74193403|7:72700415-74285345|7:72700511-74142190|7:72700525-74141494|7:72700943-74142190|7:72700997-74142190|7:72700997-74142256|7:72701019-74141493|7:72701085-74142190|7:72708238-74133273|7:72708238-74339044|7:72717370-74142224|7:72717396-74173168|7:72718124-74141784|7:72718124-74142190|7:72718253-74133273|7:72718253-74133332|7:72718278-73898515|7:72718278-74141494|7:72718278-74141603|7:72718278-74141746|7:72718278-74142190|7:72718278-74146858|7:72718278-74259899|7:72718278-74287433|7:72718279-74142256|7:72718279-74143060|7:72718279-74143240|7:72719387-74218536|7:72721450-73959106|7:72722982-74141840|7:72722982-74200092|7:72722982-74217390|7:72726591-74142329|7:72744456-74142510|7:72744495-74339044|7:72744495-76038818|7:72766313-74193397|7:72766313-74339030|7:72766314-74285345|7:72766314-74339044|7:72766314-76351578|7:72921551-74145628|7:73591994-75914797|7:73799887-75388031|7:73992745-74991125|7:73992745-81661058|7:73992745-83618176;po_P_loss_percent=0.89|10.98|1.71|16.42|24.44|13.24|4.25|43.07|74.72|74.98|32.81|39.79|86.40|67.53|86.34|78.61|69.27|89.02|84.15|79.45|71.99|41.73|82.96|90.23|94.28|94.22|94.20|94.37|94.86|94.68|94.87|95.05|94.98|93.99|96.29|96.90|96.84|96.99|97.37|97.91|97.97|98.16|98.18|98.17|97.98|95.95|94.63|89.14|98.00|98.05|98.03|98.03|98.03|98.08|98.04|98.71|86.63|99.15|97.05|99.24|99.21|99.41|99.41|99.30|99.27|99.26|99.25|99.22|98.90|91.64|90.04|99.22|99.16|99.15|94.24|99.59|99.57|95.65|94.54|99.79|99.78|87.48|42.34|96.22|87.31|90.39|87.31|38.30|99.49|23.57|21.38|14.69|1.91|1.52;P_snvindel_nb=127,.,1,.,.,.,.,.,.,1,.,1,.,.,.,.,.,.,.,124,18,.,.,.,.,.,.,.,.,.,.;P_snvindel_phen=Autism|Cutis_laxa,_autosomal_dominant_1|DNAJC30-associated_disorder|ELN-related_disorder|Inborn_genetic_diseases|Intellectual_disability|Leber-like_hereditary_optic_neuropathy,_autosomal_recessive_1|Leber_hereditary_optic_neuropathy,_autosomal_recessive|Leber_optic_atrophy,_susceptibility_to|Male_infertility|Optic_atrophy|Retinal_dystrophy|Spermatogenic_failure_77|Supravalvar_aortic_stenosis|Williams_syndrome,.,Male_infertility|Spermatogenic_failure_77,.,.,.,.,.,.,DNAJC30-associated_disorder|Leber-like_hereditary_optic_neuropathy,_autosomal_recessive_1|Leber_hereditary_optic_neuropathy,_autosomal_recessive|Leber_optic_atrophy,_susceptibility_to|Optic_atrophy|Retinal_dystrophy,.,Autism|Intellectual_disability,.,.,.,.,.,.,.,Cutis_laxa,_autosomal_dominant_1|ELN-related_disorder|Inborn_genetic_diseases|Supravalvar_aortic_stenosis|Williams_syndrome,Cutis_laxa,_autosomal_dominant_1|ELN-related_disorder|Supravalvar_aortic_stenosis,.,.,.,.,.,.,.,.,.,.;B_loss_source=.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,dbVar,.,.,.,.,dbVar,.,dbVar,dbVar,dbVar,dbVar,.,.,.,.,.;B_loss_coord=.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,chr7:73157999-73206000,.,.,.,.,chr7:73447215-73480401,.,chr7:73504792-73813060,chr7:73504792-73813060,chr7:73504792-73813060,chr7:73504792-73813060,.,.,.,.,.;B_loss_AFmax=.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,0.01,.,.,.,.,0.01,.,0.01,0.01,0.01,0.01,.,.,.,.,.;B_inv_source=IMH;B_inv_coord=7:66631329-143298938|7:67635774-98083201;B_inv_AFmax=0.5;po_B_gain_someG_source=7:74110032-74113459_DDD:24519|;po_B_gain_someG_coord=7:74103674-74113108_DDD:24517|7:74111368-74111473_DDD:24520;po_B_loss_someG_source=chr7:72788610-72788928_dbVar|chr7:72792927-72794734_dbVar|chr7:72807457-72811747_dbVar|chr7:72809374-72811765_dbVar|chr7:72831507-72833102_dbVar|chr7:72831655-72833172_dbVar|7:72859067-72859930_DDD:24502|chr7:72859126-72859948_dbVar|chr7:72958486-72958582_dbVar|chr7:72976072-72983729_dbVar|chr7:73003322-73003446_dbVar|chr7:73047101-73047474_dbVar|chr7:73062999-73081000_dbVar|chr7:73072977-73073093_dbVar|chr7:73106347-73106427_dbVar|chr7:73157999-73206000_dbVar|chr7:73190196-73190548_dbVar|chr7:73196830-73198271_dbVar|chr7:73211482-73211654_dbVar|chr7:73223050-73223264_dbVar...;po_B_loss_someG_coord=chr7:72783921-72784587_dbVar|chr7:72790491-72790586_dbVar|chr7:72806431-72813279_dbVar|chr7:72809373-72811754_dbVar|7:72809386-72811787_DDD:24500|7:72831554-72833141_DDD:24501|chr7:72850871-72854146_dbVar|chr7:72859093-72859952_dbVar|chr7:72955017-72955274_dbVar|chr7:72962422-72963182_dbVar|chr7:73002815-73002896_dbVar|chr7:73023279-73023954_dbVar|chr7:73054513-73055107_dbVar|chr7:73065479-73067124_dbVar|chr7:73090809-73093167_dbVar|chr7:73146454-73146754_dbVar|chr7:73173329-73173399_dbVar|chr7:73196779-73198220_dbVar|chr7:73211482-73211632_dbVar|chr7:73222000-73236000_dbVar...;GC_content_left=0.37;GC_content_right=0.355;Repeat_coord_left=7:72726181-72726486;Repeat_type_left=AluSz;SegDup_left=7:72700438-72744454|7:72700443-72744454;HI=3,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,3,.,0,.,.,.,.,.,0,.,0,.;TS=.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,0,.,0,.,.,.,.,.,0,.,0,.;DDD_HI_percent=88.46,55.55,65.69,46.95,23.74,28.63,30.81,36.45,64.11,80.16,.,22.82,.,.,76.55,33.46,23.72,.,.,8.62,.,19.66,21.78,.,88.46,14.42,47.98,47.51,.,33.5,.;ExAC_delZ=1.77201404347458,.,.,0.247827425263201,1.02239565516008,1.05583278690403,-0.199291215312469,0.942636989769333,.,0.717396479665947,.,0.950800964625408,.,.,0.643446275430498,0.332553044404404,0.563064431580096,.,.,0.1188507761401,.,0.623604739936053,0.339580839486745,.,0.592710857132059,0.200864992787726,1.014608801418,1.77201404347458,.,.,.;ExAC_dupZ=0.0159631069818757,.,.,-1.18776035129969,0.0159631069818757,-0.553040364632404,-0.922199212243606,-0.774220086661663,.,-0.500797326082256,.,-0.794674734358171,.,.,-0.675433866559718,-0.966715148489597,-0.809178554455325,.,.,-1.61408470478924,.,-0.79212126645541,-0.49261121282204,.,-0.653878691847743,-0.430045328414053,-0.895566510532316,-0.0325005901648791,.,.,.;ExAC_cnvZ=0.491444562429841,.,.,-0.895389454591556,0.395552906953086,-0.0819162539430506,-0.751016280020485,-0.327638361779731,.,-0.15204008716984,.,-0.324619004824717,.,.,-0.327510119466819,-0.688425296234703,-0.46244511082827,.,.,-1.04153334326364,.,-0.396805714672051,-0.247951312124761,.,-0.292110083865967,-0.225638310792768,-0.401705936344982,0.491444562429841,.,.,.;ExAC_synZ=2.70903614483931,0.317380023327075,1.49986407027643,.,-0.902054979760057,-0.44503506022657,0.200201742907301,0.58127606528246,-0.0288746954043306,1.08623431117684,.,1.10438995088098,.,.,1.09331776236833,2.70903614483931,-0.0167724140747313,.,.,-0.09395744769762,.,-0.48782967368913,-0.250271670703448,.,0.385787155434006,-0.430513909559958,-0.746648021563001,0.977775575032158,.,0.964550444182401,.;ExAC_misZ=4.23220859072885,0.681275321847818,1.4396607305099,.,4.05717005254254,1.74981493260157,0.554223709974506,1.2288879277127,0.953055172354045,1.71697083676563,.,3.33806479625907,.,.,0.473373375061211,1.92914089110849,0.933080799622852,.,.,-0.0129976080826519,.,2.85746490313868,3.27930650064444,.,-0.303087706786894,1.53581142075512,2.45305749434808,2.53365459317235,.,4.23220859072885,.;GenCC_disease=.,.,spermatogenic_failure_77,.,autism_spectrum_disorder,.,.,.,.,Leber_hereditary_optic_neuropathy|Leber_hereditary_optic_neuropathy,_autosomal_recessive,.,cystic_fibrosis,.,.,.,.,.,.,.,autosomal_dominant_cutis_laxa|cutis_laxa,_autosomal_dominant_1|familial_thoracic_aortic_aneurysm_and_aortic_dissection|supravalvular_aortic_stenosis,.,.,.,.,.,.,.,neurodevelopmental_disorder,.,.,.;GenCC_moi=.,.,AR,.,AD,.,.,.,.,AR|MT,.,AR,.,.,.,.,.,.,.,AD,.,.,.,.,.,.,.,AR,.,.,.;GenCC_classification=.,.,Moderate,.,Limited,.,.,.,.,Limited|Strong|Supportive,.,Supportive,.,.,.,.,.,.,.,Definitive|Limited|Strong|Supportive,.,.,.,.,.,.,.,Limited,.,.,.;GenCC_pmid=.,.,.,.,.,.,.,.,.,33465056|33465056[PMID],.,23572023,.,.,.,.,.,.,.,10942104[PMID]_19844261[PMID]|11175284|16085695[PMID]_18348261[PMID]|18348261|19844261|21309044|23442826|27866049|28383366|31560829|8364568,.,.,.,.,.,.,.,36308390,.,.,.;NCBI_gene_ID=.,135892,8468,8326,9031,9275,26608,51085,155382,84277,114049,6804,100422948,171022,83451,1365,1364,155368,135886,2006,107986809,3984,7458,693175,7462,5982,7461,9569,113218504,2969,101926943;HGNC_gene_ID=.,HGNC:19017,HGNC:3722,HGNC:4047,HGNC:961,HGNC:1005,HGNC:11586,HGNC:12744,HGNC:18287,HGNC:16410,HGNC:16405,HGNC:11433,HGNC:38322,HGNC:18289,HGNC:16407,HGNC:2045,HGNC:2046,HGNC:19068,HGNC:23018,HGNC:3327,HGNC:40212,HGNC:6613,HGNC:12741,HGNC:32846,HGNC:12749,HGNC:9970,HGNC:2586,HGNC:4661,HGNC:54015,HGNC:4659,HGNC:55572;OMIM_ID=604839|618202|130160,.,604839,.,.,.,.,.,.,618202,.,.,.,.,.,.,.,.,.,130160,.,.,.,.,.,.,.,.,.,.,.;OMIM_phenotype=.,.,Spermatogenic_failure_77,_620103_(3)_AR,.,.,.,.,.,.,Leber-like_hereditary_optic_neuropathy,_AR_1,_619382_(3)_AR,.,.,.,.,.,.,.,.,.,Cutis_laxa,_AD,_123700_(3)_AD|Supravalvar_aortic_stenosis,_185500_(3)_AD,.,.,.,.,.,.,.,.,.,.,.;OMIM_inheritance=.,.,AR,.,.,.,.,.,.,AR,.,.,.,.,.,.,.,.,.,AD,.,.,.,.,.,.,.,.,.,.,.;OMIM_morbid=yes,.,yes,.,.,.,.,.,.,yes,.,.,.,.,.,.,.,.,.,yes,.,.,.,.,.,.,.,.,.,.,.;LOEUF_bin=0,7,5,4,0,3,4,2,1,7,.,1,.,.,5,4,9,.,.,4,.,0,2,.,4,5,0,1,.,1,.;GnomAD_pLI=1,1.5479e-10,1.3955e-06,0.0019309,1,0.18519,0.00018452,0.047771,0.91622,0.023092,.,0.9785,.,.,0.0029581,0.52233,6.9789e-05,.,.,2.1429e-14,.,0.99937,0.43982,.,0.00022295,2.2054e-06,0.99997,0.90039,.,0.99592,.;ExAC_pLI=1,2.7256e-06,0.1306,.,1,0.70664,0.0043765,0.67682,0.65635,0.0047983,.,0.91048,.,.,9.0329e-06,0.67854,0.00013716,.,.,1.52e-05,.,0.9909,0.92254,.,0.00069106,4.0421e-05,0.99988,0.99643,.,0.99935,.;AnnotSV_ranking_score=1.45;AnnotSV_ranking_criteria=1A_(cf_Gene_count,_RE_gene,_+0.00)|2A_(cf_P_loss_source,_+1.00)|3B_(30_genes,_+0.45)|5F_(+0.00);ACMG_class=5,full=5,full=5,full=5,full=5,full=5,full=5,full=5,full=5,full=5,full=5,full=5,full=5,full=5,full=5,full=5,full=5,full=5,full=5,full=5,full=5,full=5,full=5,full=5,full=5,full=5,full=5,full=5,full=5,full=5,full=5;END=74139390;SVLEN=-1412812\tGT\t1/.\n8\t7169491\t.\tG\t<DEL>\t.\tPASS\tAnnotSV_ID=8_7169491_7753583_DEL_1;SV_start=7169491;Biologist_ranking=Benign;Annotation_mode=full,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split;CytoBand=p23.1;Gene_name=FAM66B|DEFB109B|USP17L1|USP17L4|ZNF705G|DEFB4B|DEFB103B|SPAG11B|DEFB104B|DEFB106B|DEFB105B|DEFB107B|PRR23D1|FAM90A7|FAM90A22|FAM90A23|FAM90A14|FAM90A18|FAM90A16|FAM90A8|FAM90A17|FAM90A19|FAM90A9|FAM90A10|PRR23D2|DEFB107A|DEFB105A|DEFB106A|DEFB104A|SPAG11A|DEFB103A|DEFB4A,FAM66B,DEFB109B,USP17L1,USP17L4,ZNF705G,DEFB4B,DEFB103B,SPAG11B,DEFB104B,DEFB106B,DEFB105B,DEFB107B,PRR23D1,FAM90A7,FAM90A22,FAM90A23,FAM90A14,FAM90A18,FAM90A16,FAM90A8,FAM90A17,FAM90A19,FAM90A9,FAM90A10,PRR23D2,DEFB107A,DEFB105A,DEFB106A,DEFB104A,SPAG11A,DEFB103A,DEFB4A;Closest_left=FAM90A20;Closest_right=ZNF705B;Gene_count=32;Tx=.,NR_027423,NM_001037380,NM_001256873,NM_001256874,NM_001164457,NM_001205266,NM_018661,NM_058201,NM_001040702,NM_001040704,NM_001040703,NM_001040705,NM_001282479,NM_001397387,NM_001397382,NM_001397380,NM_001164452,NM_001164451,NM_001397396,NM_001164450,NM_001397391,NM_001164449,NM_001164448,NM_001164447,NM_001282478,NM_001037668,NM_152250,NM_152251,NM_080389,NM_001395484,NM_001081551,NM_004942;Tx_version=.,2,2,1,1,3,2,4,4,1,2,3,2,1,1,1,1,1,1,1,1,1,1,1,1,1,1,3,4,3,1,4,4;Tx_start=.,7156265,7170243,7189908,7194636,7213038,7272376,7286409,7308124,7327829,7340025,7345200,7353432,7397148,7414221,7429516,7437165,7572964,7580612,7588260,7595908,7603555,7611203,7618851,7626498,7636112,7669241,7678525,7682660,7693957,7705529,7738913,7752198;Tx_end=.,7212885,7177618,7191501,7196229,7243080,7274385,7287870,7321064,7332604,7343922,7347115,7366833,7399972,7417234,7432528,7440175,7575975,7583623,7591271,7598918,7606566,7614214,7621862,7629510,7638935,7673238,7681402,7686575,7698764,7718465,7740185,7754238;Overlapped_tx_length=.,43395,7375,1593,1593,30042,2009,1461,12940,4775,3897,1915,13401,2824,3013,3012,3010,3011,3011,3011,3010,3011,3011,3011,3012,2823,3997,2877,3915,4807,12936,1272,1385;Overlapped_CDS_length=.,0,264,1593,1593,903,195,204,402,219,198,237,213,840,1395,1395,1395,1395,1395,1395,1395,1395,1395,1395,1395,840,213,237,198,219,402,204,58;Overlapped_CDS_percent=.,0,100,100,100,100,100,100,100,100,100,100,100,100,100,100,100,100,100,100,100,100,100,100,100,100,100,100,100,100,100,100,29;Frameshift=.,.,no,no,no,no,no,no,no,no,no,no,no,no,no,no,no,no,no,no,no,no,no,no,no,no,no,no,no,no,no,no,yes;Exon_count=.,7,2,1,1,7,2,2,3,2,2,3,2,4,4,4,4,4,4,4,4,4,4,4,4,4,2,3,2,2,3,2,2;Location=.,txStart-intron6,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-intron1;Location2=.,UTR,5'UTR-3'UTR,5'UTR-3'UTR,5'UTR-3'UTR,5'UTR-3'UTR,5'UTR-3'UTR,5'UTR-3'UTR,5'UTR-3'UTR,5'UTR-3'UTR,5'UTR-3'UTR,5'UTR-3'UTR,5'UTR-3'UTR,5'UTR-3'UTR,5'UTR-3'UTR,5'UTR-3'UTR,5'UTR-3'UTR,5'UTR-3'UTR,5'UTR-3'UTR,5'UTR-3'UTR,5'UTR-3'UTR,5'UTR-3'UTR,5'UTR-3'UTR,5'UTR-3'UTR,5'UTR-3'UTR,5'UTR-3'UTR,5'UTR-3'UTR,5'UTR-3'UTR,5'UTR-3'UTR,5'UTR-3'UTR,5'UTR-3'UTR,5'UTR-3'UTR,5'UTR-CDS;Dist_nearest_SS=.,9797,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,412;Nearest_SS_type=.,3',.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,3';Intersect_start=.,7169490,7170243,7189908,7194636,7213038,7272376,7286409,7308124,7327829,7340025,7345200,7353432,7397148,7414221,7429516,7437165,7572964,7580612,7588260,7595908,7603555,7611203,7618851,7626498,7636112,7669241,7678525,7682660,7693957,7705529,7738913,7752198;Intersect_end=.,7212885,7177618,7191501,7196229,7243080,7274385,7287870,7321064,7332604,7343922,7347115,7366833,7399972,7417234,7432528,7440175,7575975,7583623,7591271,7598918,7606566,7614214,7621862,7629510,7638935,7673238,7681402,7686575,7698764,7718465,7740185,7753583;RE_gene=MCPH1_(morbid/RE=ABC_enhancer+GH_promoter_enhancer);po_P_gain_source=dbVar:nssv15169207|dbVar:nssv15128680|dbVar:nssv15161508|dbVar:nssv15161747|dbVar:nssv17976867|dbVar:nssv17957391|dbVar:nssv15154583|dbVar:nssv15161801|nssv15777239|nssv17976962|dbVar:nssv15154584|dbVar:nssv16206921|dbVar:nssv15154580|dbVar:nssv15161417|nssv15161657|dbVar:nssv15147671|dbVar:nssv15161846|dbVar:nssv15150473|dbVar:nssv15127651|dbVar:nssv15149098|dbVar:nssv15169210|dbVar:nssv15154582|dbVar:nssv15146537|dbVar:nssv15161807|dbVar:nssv15161553|dbVar:nssv15161105|dbVar:nssv15161095|dbVar:nssv15161561|dbVar:nssv15161078|dbVar:nssv15147455|dbVar:nssv16736635|dbVar:nssv15161269|dbVar:nssv15161748|dbVar:nssv15161749|dbVar:nssv15143576|dbVar:nssv15161775|dbVar:nssv15146180|dbVar:nssv15161087|dbVar:nssv15161068|dbVar:nssv15161792|dbVar:nssv15606063|dbVar:nssv15151542|dbVar:nssv15161084|dbVar:nssv16206931|dbVar:nssv15154577|dbVar:nssv15161089|dbVar:nssv15151538|dbVar:nssv15152254|dbVar:nssv18842054|dbVar:nssv15161540|dbVar:nssv15161727|dbVar:nssv15161764;po_P_gain_coord=8:10214-146293414|8:13939-146304022|8:46311-11879315|8:46311-30472220|8:158049-10348413|8:158049-11936107|8:158049-13974319|8:158049-146295771|8:158049-15423270|8:158049-8102819|8:158049-9750676|8:158050-146295771|8:158992-13304906|8:158992-146280828|8:158992-17536147|8:163683-46938942|8:164985-11860845|8:164985-146293414|8:168484-13147575|8:169854-10022996|8:176453-12556063|8:176453-12570496|8:176453-146294098|8:176453-16137655|8:176453-34349408|8:176453-37879246|8:176453-7838959|8:176815-43396776|8:191531-146274835|8:191531-146280020|8:191531-17536206|8:191531-22404983|8:191531-23055911|8:191531-7752586|8:191606-146280167|8:191606-24514484|8:191606-30948590|8:194618-13947374|8:1825201-24533193|8:6961184-12157391|8:6999220-11895232|8:6999220-11898980|8:6999220-38553064|8:6999220-8881836|8:7053187-11805960|8:7080282-12045269|8:7169491-12404062|8:7268820-12039974|8:7691902-12039974;po_P_gain_percent=0.40|0.40|4.94|1.92|5.73|4.96|4.23|0.40|3.83|7.35|6.09|0.40|4.44|0.40|3.36|1.25|4.99|0.40|4.50|5.93|4.72|4.71|0.40|3.66|1.71|1.55|7.62|1.35|0.40|0.40|3.37|2.63|2.55|7.71|0.40|2.40|1.90|4.25|2.57|11.24|11.93|11.92|1.85|31.03|12.29|11.76|11.16|10.16|1.42;po_P_loss_source=dbVar:nssv15168702|dbVar:nssv15169206|dbVar:nssv18842057|dbVar:nssv17956019|dbVar:nssv15154581|dbVar:nssv18326425|dbVar:nssv15149861|dbVar:nssv15775686|dbVar:nssv17976739|dbVar:nssv16208166|dbVar:nssv15774257|dbVar:nssv15149509|dbVar:nssv18330306|dbVar:nssv18329623|dbVar:nssv16216869|dbVar:nssv15169209|dbVar:nssv15223191|dbVar:nssv15147275|dbVar:nssv15148964|dbVar:nssv15147296|dbVar:nssv15146181|nssv15146816|dbVar:nssv15606064|dbVar:nssv15146660|dbVar:nssv18841910|dbVar:nssv15161264|nssv15161582|dbVar:nssv15145917|dbVar:nssv15161283|dbVar:nssv15161284|dbVar:nssv15161070|dbVar:nssv15141976|dbVar:nssv15161050;po_P_loss_coord=8:10214-10197718|8:10214-8948469|8:10502-11142629|8:10502-7214947|8:158049-10939681|8:158049-11281408|8:158049-13309069|8:158049-14214722|8:158049-30187456|8:158049-9025197|8:158049-9393052|8:158049-9749574|8:158050-10965627|8:158050-18936715|8:161517-11516619|8:164985-10007227|8:176815-7753583|8:191531-10049105|8:191531-10315994|8:191531-10724642|8:191531-7752586|8:194618-7787444|8:360370-7334625|8:399894-23712417|8:2292236-27361796|8:3791728-11384448|8:7053187-12241152|8:7092360-12372324|8:7169491-12404062|8:7268820-11805960|8:7268820-11819316;po_P_loss_percent=5.73|6.53|5.25|0.63|5.42|5.25|4.44|4.16|1.95|6.59|6.32|6.09|5.40|3.11|5.14|5.93|7.71|5.93|5.77|5.55|7.71|7.69|2.37|2.51|2.33|7.69|11.26|11.06|11.16|10.68|10.65;B_gain_source=DDD:26674|TS40:ISCA-37472|esv2761169|esv2764098,DDD:26670|DDD:26674|DDD:26675|DDD:26682|TS40:ISCA-37472|esv2761169|esv2764098,DDD:26670|DDD:26674|DDD:26675|DDD:26682|TS40:ISCA-37472|esv2761169|esv2764098,DDD:26670|DDD:26674|DDD:26675|DDD:26682|TS40:ISCA-37472|esv2761169|esv2764098,DDD:26670|DDD:26674|DDD:26675|DDD:26682|TS40:ISCA-37472|esv2761169|esv2764098,DDD:26674|DDD:26675|DDD:26689|TS40:ISCA-37472|esv2761169|esv2764098,DDD:26674|DDD:26675|DDD:26689|TS40:ISCA-37472|dgv6936n100|esv2761169|esv2764098|nsv515100,DDD:26674|DDD:26675|DDD:26689|TS40:ISCA-37472|dgv6936n100|esv2761169|esv2764098|nsv515100,DDD:26674|DDD:26675|DDD:26689|TS40:ISCA-37472|dgv6936n100|esv2761169|esv2764098|nsv515100,DDD:26674|DDD:26675|DDD:26689|TS40:ISCA-37472|dgv6936n100|esv2761169|esv2764098|nsv515100,DDD:26674|DDD:26675|DDD:26689|TS40:ISCA-37472|dgv6936n100|esv2761169|esv2764098|nsv515100,DDD:26674|DDD:26675|DDD:26689|TS40:ISCA-37472|dgv6936n100|esv2761169|esv2764098|nsv515100,DDD:26674|DDD:26675|DDD:26689|TS40:ISCA-37472|dgv6936n100|esv2761169|esv2764098|nsv515100,DDD:26674|DDD:26675|TS40:ISCA-37472|dgv6936n100|esv2761169|esv2764098|nsv515100,DDD:26674|DDD:26675|DDD:26720|TS40:ISCA-37472|dgv6936n100|esv2761169|esv2764098,DDD:26674|DDD:26720|TS40:ISCA-37472|dgv6936n100|esv2761169|esv2764098,DDD:26674|DDD:26720|TS40:ISCA-37472|dgv6936n100|esv2761169|esv2764098,DDD:26674|TS40:ISCA-37472|dgv6936n100|esv2761169|esv2764098,DDD:26674|TS40:ISCA-37472|dgv6936n100|esv2761169|esv2764098,DDD:26674|TS40:ISCA-37472|dgv6936n100|esv2761169|esv2764098,DDD:26674|TS40:ISCA-37472|dgv6936n100|esv2761169|esv2764098,DDD:26674|TS40:ISCA-37472|dgv6936n100|esv2761169|esv2764098,DDD:26674|TS40:ISCA-37472|dgv6936n100|esv2761169|esv2764098,DDD:26674|TS40:ISCA-37472|dgv6936n100|esv2761169|esv2764098,DDD:26674|TS40:ISCA-37472|dgv6936n100|esv2761169|esv2764098,DDD:26674|DDD:26727|DDD:26729|TS40:ISCA-37472|dgv6936n100|esv2761169|esv2764098,DDD:26674|DDD:26727|DDD:26729|TS40:ISCA-37472|dgv6936n100|esv2761169|esv2764098,DDD:26674|DDD:26727|DDD:26729|TS40:ISCA-37472|dgv6936n100|esv2761169|esv2764098,DDD:26674|DDD:26727|DDD:26729|TS40:ISCA-37472|dgv6936n100|esv2761169|esv2764098,DDD:26674|DDD:26727|DDD:26729|TS40:ISCA-37472|dgv6936n100|esv2761169|esv2764098,DDD:26674|DDD:26727|DDD:26729|TS40:ISCA-37472|dgv6936n100|esv2761169|esv2764098,DDD:26674|DDD:26727|DDD:26729|DDD:26742|DDD:26743|TS40:ISCA-37472|TS40:ISCA-46381|dgv6936n100|esv2761169|esv2764098|gnomAD-SV_v2.1_DUP_8_23708,DDD:26674|DDD:26727|DDD:26729|DDD:26742|DDD:26743|TS40:ISCA-37472|dgv6936n100|esv2761169|esv2764098;B_gain_coord=8:6858816-8072303|8:6959834-8600711|8:7024892-8031414|8:7053187-8130689,8:6858816-8072303|8:6959834-8600711|8:6985776-7230992|8:7024892-8031414|8:7035907-7428513|8:7053187-8130689|8:7154889-7213289,8:6858816-8072303|8:6959834-8600711|8:6985776-7230992|8:7024892-8031414|8:7035907-7428513|8:7053187-8130689|8:7154889-7213289,8:6858816-8072303|8:6959834-8600711|8:6985776-7230992|8:7024892-8031414|8:7035907-7428513|8:7053187-8130689|8:7154889-7213289,8:6858816-8072303|8:6959834-8600711|8:6985776-7230992|8:7024892-8031414|8:7035907-7428513|8:7053187-8130689|8:7154889-7213289,8:6858816-8072303|8:6959834-8600711|8:7024892-8031414|8:7035907-7428513|8:7053187-8130689|8:7201176-7392220,8:6858816-8072303|8:6959834-8600711|8:7024892-8031414|8:7035907-7428513|8:7053187-8130689|8:7201176-7392220|8:7241528-7403182|8:7250369-7832042,8:6858816-8072303|8:6959834-8600711|8:7024892-8031414|8:7035907-7428513|8:7053187-8130689|8:7201176-7392220|8:7241528-7403182|8:7250369-7832042,8:6858816-8072303|8:6959834-8600711|8:7024892-8031414|8:7035907-7428513|8:7053187-8130689|8:7201176-7392220|8:7241528-7403182|8:7250369-7832042,8:6858816-8072303|8:6959834-8600711|8:7024892-8031414|8:7035907-7428513|8:7053187-8130689|8:7201176-7392220|8:7241528-7403182|8:7250369-7832042,8:6858816-8072303|8:6959834-8600711|8:7024892-8031414|8:7035907-7428513|8:7053187-8130689|8:7201176-7392220|8:7241528-7403182|8:7250369-7832042,8:6858816-8072303|8:6959834-8600711|8:7024892-8031414|8:7035907-7428513|8:7053187-8130689|8:7201176-7392220|8:7241528-7403182|8:7250369-7832042,8:6858816-8072303|8:6959834-8600711|8:7024892-8031414|8:7035907-7428513|8:7053187-8130689|8:7201176-7392220|8:7241528-7403182|8:7250369-7832042,8:6858816-8072303|8:6959834-8600711|8:7024892-8031414|8:7035907-7428513|8:7053187-8130689|8:7241528-7403182|8:7250369-7832042,8:6858816-8072303|8:6959834-8600711|8:7024892-8031414|8:7035907-7428513|8:7053187-8130689|8:7250369-7832042|8:7401394-7472190,8:6858816-8072303|8:6959834-8600711|8:7024892-8031414|8:7053187-8130689|8:7250369-7832042|8:7401394-7472190,8:6858816-8072303|8:6959834-8600711|8:7024892-8031414|8:7053187-8130689|8:7250369-7832042|8:7401394-7472190,8:6858816-8072303|8:6959834-8600711|8:7024892-8031414|8:7053187-8130689|8:7250369-7832042,8:6858816-8072303|8:6959834-8600711|8:7024892-8031414|8:7053187-8130689|8:7250369-7832042,8:6858816-8072303|8:6959834-8600711|8:7024892-8031414|8:7053187-8130689|8:7250369-7832042,8:6858816-8072303|8:6959834-8600711|8:7024892-8031414|8:7053187-8130689|8:7250369-7832042,8:6858816-8072303|8:6959834-8600711|8:7024892-8031414|8:7053187-8130689|8:7250369-7832042,8:6858816-8072303|8:6959834-8600711|8:7024892-8031414|8:7053187-8130689|8:7250369-7832042,8:6858816-8072303|8:6959834-8600711|8:7024892-8031414|8:7053187-8130689|8:7250369-7832042,8:6858816-8072303|8:6959834-8600711|8:7024892-8031414|8:7053187-8130689|8:7250369-7832042,8:6858816-8072303|8:6959834-8600711|8:7024892-8031414|8:7053187-8130689|8:7250369-7832042|8:7632945-7856630|8:7634705-7829839,8:6858816-8072303|8:6959834-8600711|8:7024892-8031414|8:7053187-8130689|8:7250369-7832042|8:7632945-7856630|8:7634705-7829839,8:6858816-8072303|8:6959834-8600711|8:7024892-8031414|8:7053187-8130689|8:7250369-7832042|8:7632945-7856630|8:7634705-7829839,8:6858816-8072303|8:6959834-8600711|8:7024892-8031414|8:7053187-8130689|8:7250369-7832042|8:7632945-7856630|8:7634705-7829839,8:6858816-8072303|8:6959834-8600711|8:7024892-8031414|8:7053187-8130689|8:7250369-7832042|8:7632945-7856630|8:7634705-7829839,8:6858816-8072303|8:6959834-8600711|8:7024892-8031414|8:7053187-8130689|8:7250369-7832042|8:7632945-7856630|8:7634705-7829839,8:6858816-8072303|8:6959834-8600711|8:7024892-8031414|8:7053187-8130689|8:7250369-7832042|8:7632945-7856630|8:7634705-7829839|8:7718891-7784263|8:7734213-7856702|8:7737000-7743100|8:7737000-7743100,8:6858816-8072303|8:6959834-8600711|8:7024892-8031414|8:7053187-8130689|8:7250369-7832042|8:7632945-7856630|8:7634705-7829839|8:7718891-7784263|8:7734213-7856702;B_gain_AFmax=0.2355;B_loss_source=DDD:26674|HI40:ISCA-37472|esv2761169|esv2764098,DDD:26670|DDD:26674|DDD:26675|DDD:26682|HI40:ISCA-37472|dbVar|esv2761169|esv2764098,DDD:26670|DDD:26674|DDD:26675|DDD:26682|DDD:26683|HI40:ISCA-37472|dbVar|esv2675221|esv2761169|esv2764098,DDD:26670|DDD:26674|DDD:26675|DDD:26682|HI40:ISCA-37472|dbVar|esv2761169|esv2764098,DDD:26670|DDD:26674|DDD:26675|DDD:26682|DDD:26687|HI40:ISCA-37472|dbVar|esv2761169|esv2764098,DDD:26674|DDD:26675|HI40:ISCA-37472|dbVar|esv2761169|esv2764098,DDD:26674|DDD:26675|HI40:ISCA-37472|dbVar|esv2761169|esv2764098,DDD:26674|DDD:26675|HI40:ISCA-37472|dbVar|esv2761169|esv2764098,DDD:26674|DDD:26675|HI40:ISCA-37472|dbVar|esv2761169|esv2764098,DDD:26674|DDD:26675|HI40:ISCA-37472|dbVar|esv2761169|esv2764098,DDD:26674|DDD:26675|HI40:ISCA-37472|dbVar|esv2761169|esv2764098,DDD:26674|DDD:26675|HI40:ISCA-37472|dbVar|esv2761169|esv2764098,DDD:26674|DDD:26675|HI40:ISCA-37472|dbVar|esv2761169|esv2764098,DDD:26674|DDD:26675|HI40:ISCA-37472|dbVar|esv2761169|esv2764098,DDD:26674|DDD:26675|DDD:26720|HI40:ISCA-37472|dbVar|esv2761169|esv2764098|gnomAD-SV_v2.1_DEL_8_89341|gnomAD-SV_v2.1_DEL_8_89342,DDD:26674|DDD:26720|HI40:ISCA-37472|dbVar|esv2761169|esv2764098|gnomAD-SV_v2.1_DEL_8_89342,DDD:26674|DDD:26720|HI40:ISCA-37472|dbVar|esv2761169|esv2764098|gnomAD-SV_v2.1_DEL_8_89342,DDD:26674|HI40:ISCA-37472|esv2761169|esv2764098,DDD:26674|HI40:ISCA-37472|esv2761169|esv2764098,DDD:26674|HI40:ISCA-37472|esv2761169|esv2764098,DDD:26674|HI40:ISCA-37472|esv2761169|esv2764098,DDD:26674|HI40:ISCA-37472|esv2761169|esv2764098,DDD:26674|HI40:ISCA-37472|esv2761169|esv2764098,DDD:26674|HI40:ISCA-37472|esv2761169|esv2764098,DDD:26674|HI40:ISCA-37472|esv2761169|esv2764098,DDD:26674|DDD:26727|HI40:ISCA-37472|esv2761169|esv2764098,DDD:26674|DDD:26727|HI40:ISCA-37472|esv2761169|esv2764098,DDD:26674|DDD:26727|HI40:ISCA-37472|esv2761169|esv2764098,DDD:26674|DDD:26727|HI40:ISCA-37472|esv2761169|esv2764098,DDD:26674|DDD:26727|HI40:ISCA-37472|esv2761169|esv2764098,DDD:26674|DDD:26727|HI40:ISCA-37472|esv2761169|esv2764098,DDD:26674|DDD:26727|HI40:ISCA-37472|HI40:ISCA-46380|dbVar|esv2761169|esv2764098|gnomAD-SV_v2.1_DEL_8_89353,DDD:26674|DDD:26727|HI40:ISCA-37472|HI40:ISCA-46380|HI40:ISCA-46382|dbVar|esv2761169|esv2764098|gnomAD-SV_v2.1_DEL_8_89353|gnomAD-SV_v2.1_DEL_8_89355;B_loss_coord=8:6858816-8072303|8:6959834-8600711|8:7024892-8031414|8:7053187-8130689,8:6858816-8072303|8:6959834-8600711|8:6985776-7230992|8:7024892-8031414|8:7035907-7428513|8:7053187-8130689|chr8:7085462-7537934|8:7154889-7213289,8:6858816-8072303|8:6959834-8600711|8:6985776-7230992|8:7024892-8031414|8:7035907-7428513|8:7053187-8130689|chr8:7085462-7537934|8:7154889-7213289|8:7158046-7189992|8:7158202-7189800,8:6858816-8072303|8:6959834-8600711|8:6985776-7230992|8:7024892-8031414|8:7035907-7428513|8:7053187-8130689|chr8:7085462-7537934|8:7154889-7213289,8:6858816-8072303|8:6959834-8600711|8:6985776-7230992|8:7024892-8031414|8:7035907-7428513|8:7053187-8130689|chr8:7085462-7537934|8:7154889-7213289|8:7190892-7196288,8:6858816-8072303|8:6959834-8600711|8:7024892-8031414|8:7035907-7428513|8:7053187-8130689|chr8:7085462-7537934,8:6858816-8072303|8:6959834-8600711|8:7024892-8031414|8:7035907-7428513|8:7053187-8130689|chr8:7085462-7537934,8:6858816-8072303|8:6959834-8600711|8:7024892-8031414|8:7035907-7428513|8:7053187-8130689|chr8:7085462-7537934,8:6858816-8072303|8:6959834-8600711|8:7024892-8031414|8:7035907-7428513|8:7053187-8130689|chr8:7085462-7537934,8:6858816-8072303|8:6959834-8600711|8:7024892-8031414|8:7035907-7428513|8:7053187-8130689|chr8:7085462-7537934,8:6858816-8072303|8:6959834-8600711|8:7024892-8031414|8:7035907-7428513|8:7053187-8130689|chr8:7085462-7537934,8:6858816-8072303|8:6959834-8600711|8:7024892-8031414|8:7035907-7428513|8:7053187-8130689|chr8:7085462-7537934,8:6858816-8072303|8:6959834-8600711|8:7024892-8031414|8:7035907-7428513|8:7053187-8130689|chr8:7085462-7537934,8:6858816-8072303|8:6959834-8600711|8:7024892-8031414|8:7035907-7428513|8:7053187-8130689|chr8:7085462-7537934,8:6858816-8072303|8:6959834-8600711|8:7024892-8031414|8:7035907-7428513|8:7053187-8130689|chr8:7085462-7537934|8:7401394-7472190|chr8:7402900-7419700|8:7402900-7419700|chr8:7405950-7443050|8:7405950-7443050,8:6858816-8072303|8:6959834-8600711|8:7024892-8031414|8:7053187-8130689|chr8:7085462-7537934|8:7401394-7472190|chr8:7405950-7443050|8:7405950-7443050,8:6858816-8072303|8:6959834-8600711|8:7024892-8031414|8:7053187-8130689|chr8:7085462-7537934|8:7401394-7472190|chr8:7405950-7443050|8:7405950-7443050,8:6858816-8072303|8:6959834-8600711|8:7024892-8031414|8:7053187-8130689,8:6858816-8072303|8:6959834-8600711|8:7024892-8031414|8:7053187-8130689,8:6858816-8072303|8:6959834-8600711|8:7024892-8031414|8:7053187-8130689,8:6858816-8072303|8:6959834-8600711|8:7024892-8031414|8:7053187-8130689,8:6858816-8072303|8:6959834-8600711|8:7024892-8031414|8:7053187-8130689,8:6858816-8072303|8:6959834-8600711|8:7024892-8031414|8:7053187-8130689,8:6858816-8072303|8:6959834-8600711|8:7024892-8031414|8:7053187-8130689,8:6858816-8072303|8:6959834-8600711|8:7024892-8031414|8:7053187-8130689,8:6858816-8072303|8:6959834-8600711|8:7024892-8031414|8:7053187-8130689|8:7632945-7856630,8:6858816-8072303|8:6959834-8600711|8:7024892-8031414|8:7053187-8130689|8:7632945-7856630,8:6858816-8072303|8:6959834-8600711|8:7024892-8031414|8:7053187-8130689|8:7632945-7856630,8:6858816-8072303|8:6959834-8600711|8:7024892-8031414|8:7053187-8130689|8:7632945-7856630,8:6858816-8072303|8:6959834-8600711|8:7024892-8031414|8:7053187-8130689|8:7632945-7856630,8:6858816-8072303|8:6959834-8600711|8:7024892-8031414|8:7053187-8130689|8:7632945-7856630,8:6858816-8072303|8:6959834-8600711|8:7024892-8031414|8:7053187-8130689|8:7632945-7856630|8:7736500-7764500|chr8:7736500-7764500|8:7736500-7764500,8:6858816-8072303|8:6959834-8600711|8:7024892-8031414|8:7053187-8130689|8:7632945-7856630|8:7736500-7764500|chr8:7736500-7764500|8:7736500-7764500|8:7745000-7754100|chr8:7745000-7754100|8:7745000-7754100;B_loss_AFmax=0.2237,0.2237,0.2237,0.2237,0.2237,0.2237,0.2237,0.2237,0.2237,0.2237,0.2237,0.2237,0.2237,0.2237,0.5803,0.4842,0.4842,0.2237,0.2237,0.2237,0.2237,0.2237,0.2237,0.2237,0.2237,0.2237,0.2237,0.2237,0.2237,0.2237,0.2237,0.3262,0.5182;po_B_gain_someG_source=8:6959834-8600711_esv2764098|8:7024892-8031414_DDD:26674|8:7053187-8130689_TS40:ISCA-37472|8:7170611-7177489_nsv515099|8:7201176-7392220_DDD:26689|8:7212583-7227421_1000g|8:7212583-7227421_TS40:ISCA-46631|8:7241528-7403182_nsv515100|8:7308244-7308706_DDD:26704|8:7632945-7856630_DDD:26727|8:7717878-7717938_DDD:26737|8:7734213-7856702_DDD:26743|8:7737000-7743100_gnomAD-SV_v2.1_DUP_8_23708|8:6959834-8600711_esv2764098|8:7024892-8031414_DDD:26674|8:7053187-8130689_TS40:ISCA-37472|8:7170611-7177489_nsv515099|8:7201176-7392220_DDD:26689|8:7212583-7227421_1000g|8:7212583-7227421_TS40:ISCA-46631...;po_B_gain_someG_coord=8:6858816-8072303_esv2761169|8:6985776-7230992_DDD:26670|8:7035907-7428513_DDD:26675|8:7154889-7213289_DDD:26682|8:7190891-7190961_DDD:26685|8:7212583-7227421_1000g|8:7212583-7227421_1000g|8:7212583-7227421_dgv1365e214|8:7250369-7832042_dgv6936n100|8:7401394-7472190_DDD:26720|8:7634705-7829839_DDD:26729|8:7718891-7784263_DDD:26742|8:7737000-7743100_TS40:ISCA-46381|8:6858816-8072303_esv2761169|8:6985776-7230992_DDD:26670|8:7035907-7428513_DDD:26675|8:7154889-7213289_DDD:26682|8:7190891-7190961_DDD:26685|8:7212583-7227421_1000g|8:7212583-7227421_1000g...;po_B_loss_someG_source=8:6959834-8600711_esv2764098|8:7024892-8031414_DDD:26674|8:7053187-8130689_HI40:ISCA-37472|8:7154889-7213289_DDD:26682|8:7158202-7189800_DDD:26683|chr8:7179582-7191032_dbVar|8:7179583-7191032_esv3616115|8:7190891-7190961_DDD:26685|chr8:7201000-7206400_dbVar|chr8:7204184-7204308_dbVar|8:7212583-7227421_1000g|chr8:7221359-7221602_dbVar|8:7228000-7235000_gnomAD-SV_v2.1_DEL_8_89335|chr8:7286205-7286328_dbVar|chr8:7326402-7326559_dbVar|8:7355000-7363000_gnomAD-SV_v2.1_DEL_8_89340|8:7355294-7364762_1000g|8:7401394-7472190_DDD:26720|8:7402900-7419700_gnomAD-SV_v2.1_DEL_8_89341|8:7405950-7443050_gnomAD-SV_v2.1_DEL_8_89342...;po_B_loss_someG_coord=8:6858816-8072303_esv2761169|8:6985776-7230992_DDD:26670|8:7035907-7428513_DDD:26675|chr8:7085462-7537934_dbVar|8:7158046-7189992_esv2675221|chr8:7175745-7175870_dbVar|8:7179583-7191032_1000g|chr8:7180382-7180743_dbVar|8:7190892-7196288_DDD:26687|8:7201000-7206400_gnomAD-SV_v2.1_DEL_8_89332|chr8:7212582-7227421_dbVar|8:7212583-7227421_esv3616116|chr8:7228000-7235000_dbVar|chr8:7276552-7277128_dbVar|8:7308244-7308706_DDD:26704|chr8:7355000-7363000_dbVar|chr8:7355293-7364762_dbVar|8:7355294-7364762_esv3616120|chr8:7402900-7419700_dbVar|chr8:7405950-7443050_dbVar...;GC_content_left=0.26;GC_content_right=0.33;SegDup_left=8:7150797-7184572|8:7150797-7195814|8:7150797-7200543|8:7150798-7238459;SegDup_right=8:7600001-7825413;ENCODE_blacklist_left=8:7012601-8066200;ENCODE_blacklist_characteristics_left=High_Signal_Region;ENCODE_blacklist_right=8:7012601-8066200;ENCODE_blacklist_characteristics_right=High_Signal_Region;DDD_HI_percent=99.72,.,.,.,.,91.1,99.72,85.97,89.4,95.66,93.29,90.95,91.71,.,.,.,.,.,.,.,.,.,.,.,.,.,92.48,90.61,90.45,96.98,97.15,93.4,97.87;ExAC_synZ=2.14121257165536,.,.,.,.,-1.59751875296103,.,.,2.14121257165536,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,0.918523398770926,0.676417083229402,1.33624136747443,0.140072348156658,.,1.12959151611996;ExAC_misZ=2.19863945242443,.,.,.,.,-3.97736276921453,.,.,1.8677219993927,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,0.008093353918723,1.6332400949348,2.19863945242443,0.903069021299127,.,0.758429673080804;NCBI_gene_ID=.,100128890,641517,401447,645402,100131980,100289462,55894,10407,503618,503841,504180,503614,100131608,441317,645558,645572,645651,441326,441323,441324,728746,728753,441327,441328,100133251,245910,245908,245909,140596,653423,414325,1673;HGNC_gene_ID=.,HGNC:28890,HGNC:33469,HGNC:37182,HGNC:37176,HGNC:37134,HGNC:30193,HGNC:31702,HGNC:14534,HGNC:26165,HGNC:28879,HGNC:29930,HGNC:31918,HGNC:49420,HGNC:32255,HGNC:32270,HGNC:32271,HGNC:32262,HGNC:32266,HGNC:32264,HGNC:32256,HGNC:32265,HGNC:32267,HGNC:32257,HGNC:32258,HGNC:49396,HGNC:18086,HGNC:18087,HGNC:18088,HGNC:18115,HGNC:33342,HGNC:15967,HGNC:2767;LOEUF_bin=8,.,.,.,.,9,9,.,9,9,9,9,.,8,.,.,.,.,.,.,.,.,.,.,.,.,9,8,9,9,9,.,9;GnomAD_pLI=0.4218,.,.,.,.,1.6471e-08,0.067977,.,0.027751,0.33176,0.081151,0.29184,.,0.4218,.,.,.,.,.,.,.,.,.,.,.,.,0.32633,0.37719,0.0085821,0.093748,6.9645e-05,.,0.0011637;ExAC_pLI=0.51947,.,.,.,.,4.2486e-09,.,.,0.047238,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,0.43625,0.40931,0.51947,0.039012,.,0.39981;AnnotSV_ranking_score=-0.55;AnnotSV_ranking_criteria=1A_(cf_Gene_count,_RE_gene,_+0.00)|2F/4O_(cf_B_loss_source,_-1.00)|2B_(cf_po_P_loss_source,_HI,_OMIM_morbid,_+0.00|3B_(32_genes,_+0.45)|5F_(+0.00);ACMG_class=3,full=3,full=3,full=3,full=3,full=3,full=3,full=3,full=3,full=3,full=3,full=3,full=3,full=3,full=3,full=3,full=3,full=3,full=3,full=3,full=3,full=3,full=3,full=3,full=3,full=3,full=3,full=3,full=3,full=3,full=3,full=3,full=3;END=7753583;SVLEN=-584093\tGT\t1/.\n8\t7169491\t.\tG\t<DUP>\t.\tPASS\tAnnotSV_ID=8_7169491_7753583_DUP_1;SV_start=7169491;Biologist_ranking=Benign;Annotation_mode=full,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split;CytoBand=p23.1;Gene_name=FAM66B|DEFB109B|USP17L1|USP17L4|ZNF705G|DEFB4B|DEFB103B|SPAG11B|DEFB104B|DEFB106B|DEFB105B|DEFB107B|PRR23D1|FAM90A7|FAM90A22|FAM90A23|FAM90A14|FAM90A18|FAM90A16|FAM90A8|FAM90A17|FAM90A19|FAM90A9|FAM90A10|PRR23D2|DEFB107A|DEFB105A|DEFB106A|DEFB104A|SPAG11A|DEFB103A|DEFB4A,FAM66B,DEFB109B,USP17L1,USP17L4,ZNF705G,DEFB4B,DEFB103B,SPAG11B,DEFB104B,DEFB106B,DEFB105B,DEFB107B,PRR23D1,FAM90A7,FAM90A22,FAM90A23,FAM90A14,FAM90A18,FAM90A16,FAM90A8,FAM90A17,FAM90A19,FAM90A9,FAM90A10,PRR23D2,DEFB107A,DEFB105A,DEFB106A,DEFB104A,SPAG11A,DEFB103A,DEFB4A;Closest_left=FAM90A20;Closest_right=ZNF705B;Gene_count=32;Tx=.,NR_027423,NM_001037380,NM_001256873,NM_001256874,NM_001164457,NM_001205266,NM_018661,NM_058201,NM_001040702,NM_001040704,NM_001040703,NM_001040705,NM_001282479,NM_001397387,NM_001397382,NM_001397380,NM_001164452,NM_001164451,NM_001397396,NM_001164450,NM_001397391,NM_001164449,NM_001164448,NM_001164447,NM_001282478,NM_001037668,NM_152250,NM_152251,NM_080389,NM_001395484,NM_001081551,NM_004942;Tx_version=.,2,2,1,1,3,2,4,4,1,2,3,2,1,1,1,1,1,1,1,1,1,1,1,1,1,1,3,4,3,1,4,4;Tx_start=.,7156265,7170243,7189908,7194636,7213038,7272376,7286409,7308124,7327829,7340025,7345200,7353432,7397148,7414221,7429516,7437165,7572964,7580612,7588260,7595908,7603555,7611203,7618851,7626498,7636112,7669241,7678525,7682660,7693957,7705529,7738913,7752198;Tx_end=.,7212885,7177618,7191501,7196229,7243080,7274385,7287870,7321064,7332604,7343922,7347115,7366833,7399972,7417234,7432528,7440175,7575975,7583623,7591271,7598918,7606566,7614214,7621862,7629510,7638935,7673238,7681402,7686575,7698764,7718465,7740185,7754238;Overlapped_tx_length=.,43395,7375,1593,1593,30042,2009,1461,12940,4775,3897,1915,13401,2824,3013,3012,3010,3011,3011,3011,3010,3011,3011,3011,3012,2823,3997,2877,3915,4807,12936,1272,1385;Overlapped_CDS_length=.,0,264,1593,1593,903,195,204,402,219,198,237,213,840,1395,1395,1395,1395,1395,1395,1395,1395,1395,1395,1395,840,213,237,198,219,402,204,58;Overlapped_CDS_percent=.,0,100,100,100,100,100,100,100,100,100,100,100,100,100,100,100,100,100,100,100,100,100,100,100,100,100,100,100,100,100,100,29;Frameshift=.,.,no,no,no,no,no,no,no,no,no,no,no,no,no,no,no,no,no,no,no,no,no,no,no,no,no,no,no,no,no,no,yes;Exon_count=.,7,2,1,1,7,2,2,3,2,2,3,2,4,4,4,4,4,4,4,4,4,4,4,4,4,2,3,2,2,3,2,2;Location=.,txStart-intron6,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-intron1;Location2=.,UTR,5'UTR-3'UTR,5'UTR-3'UTR,5'UTR-3'UTR,5'UTR-3'UTR,5'UTR-3'UTR,5'UTR-3'UTR,5'UTR-3'UTR,5'UTR-3'UTR,5'UTR-3'UTR,5'UTR-3'UTR,5'UTR-3'UTR,5'UTR-3'UTR,5'UTR-3'UTR,5'UTR-3'UTR,5'UTR-3'UTR,5'UTR-3'UTR,5'UTR-3'UTR,5'UTR-3'UTR,5'UTR-3'UTR,5'UTR-3'UTR,5'UTR-3'UTR,5'UTR-3'UTR,5'UTR-3'UTR,5'UTR-3'UTR,5'UTR-3'UTR,5'UTR-3'UTR,5'UTR-3'UTR,5'UTR-3'UTR,5'UTR-3'UTR,5'UTR-3'UTR,5'UTR-CDS;Dist_nearest_SS=.,9797,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,412;Nearest_SS_type=.,3',.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,3';Intersect_start=.,7169490,7170243,7189908,7194636,7213038,7272376,7286409,7308124,7327829,7340025,7345200,7353432,7397148,7414221,7429516,7437165,7572964,7580612,7588260,7595908,7603555,7611203,7618851,7626498,7636112,7669241,7678525,7682660,7693957,7705529,7738913,7752198;Intersect_end=.,7212885,7177618,7191501,7196229,7243080,7274385,7287870,7321064,7332604,7343922,7347115,7366833,7399972,7417234,7432528,7440175,7575975,7583623,7591271,7598918,7606566,7614214,7621862,7629510,7638935,7673238,7681402,7686575,7698764,7718465,7740185,7753583;RE_gene=MCPH1_(morbid/RE=ABC_enhancer+GH_promoter_enhancer);po_P_gain_source=dbVar:nssv15169207|dbVar:nssv15128680|dbVar:nssv15161508|dbVar:nssv15161747|dbVar:nssv17976867|dbVar:nssv17957391|dbVar:nssv15154583|dbVar:nssv15161801|nssv15777239|nssv17976962|dbVar:nssv15154584|dbVar:nssv16206921|dbVar:nssv15154580|dbVar:nssv15161417|nssv15161657|dbVar:nssv15147671|dbVar:nssv15161846|dbVar:nssv15150473|dbVar:nssv15127651|dbVar:nssv15149098|dbVar:nssv15169210|dbVar:nssv15154582|dbVar:nssv15146537|dbVar:nssv15161807|dbVar:nssv15161553|dbVar:nssv15161105|dbVar:nssv15161095|dbVar:nssv15161561|dbVar:nssv15161078|dbVar:nssv15147455|dbVar:nssv16736635|dbVar:nssv15161269|dbVar:nssv15161748|dbVar:nssv15161749|dbVar:nssv15143576|dbVar:nssv15161775|dbVar:nssv15146180|dbVar:nssv15161087|dbVar:nssv15161068|dbVar:nssv15161792|dbVar:nssv15606063|dbVar:nssv15151542|dbVar:nssv15161084|dbVar:nssv16206931|dbVar:nssv15154577|dbVar:nssv15161089|dbVar:nssv15151538|dbVar:nssv15152254|dbVar:nssv18842054|dbVar:nssv15161540|dbVar:nssv15161727|dbVar:nssv15161764;po_P_gain_coord=8:10214-146293414|8:13939-146304022|8:46311-11879315|8:46311-30472220|8:158049-10348413|8:158049-11936107|8:158049-13974319|8:158049-146295771|8:158049-15423270|8:158049-8102819|8:158049-9750676|8:158050-146295771|8:158992-13304906|8:158992-146280828|8:158992-17536147|8:163683-46938942|8:164985-11860845|8:164985-146293414|8:168484-13147575|8:169854-10022996|8:176453-12556063|8:176453-12570496|8:176453-146294098|8:176453-16137655|8:176453-34349408|8:176453-37879246|8:176453-7838959|8:176815-43396776|8:191531-146274835|8:191531-146280020|8:191531-17536206|8:191531-22404983|8:191531-23055911|8:191531-7752586|8:191606-146280167|8:191606-24514484|8:191606-30948590|8:194618-13947374|8:1825201-24533193|8:6961184-12157391|8:6999220-11895232|8:6999220-11898980|8:6999220-38553064|8:6999220-8881836|8:7053187-11805960|8:7080282-12045269|8:7169491-12404062|8:7268820-12039974|8:7691902-12039974;po_P_gain_percent=0.40|0.40|4.94|1.92|5.73|4.96|4.23|0.40|3.83|7.35|6.09|0.40|4.44|0.40|3.36|1.25|4.99|0.40|4.50|5.93|4.72|4.71|0.40|3.66|1.71|1.55|7.62|1.35|0.40|0.40|3.37|2.63|2.55|7.71|0.40|2.40|1.90|4.25|2.57|11.24|11.93|11.92|1.85|31.03|12.29|11.76|11.16|10.16|1.42;po_P_loss_source=dbVar:nssv15168702|dbVar:nssv15169206|dbVar:nssv18842057|dbVar:nssv17956019|dbVar:nssv15154581|dbVar:nssv18326425|dbVar:nssv15149861|dbVar:nssv15775686|dbVar:nssv17976739|dbVar:nssv16208166|dbVar:nssv15774257|dbVar:nssv15149509|dbVar:nssv18330306|dbVar:nssv18329623|dbVar:nssv16216869|dbVar:nssv15169209|dbVar:nssv15223191|dbVar:nssv15147275|dbVar:nssv15148964|dbVar:nssv15147296|dbVar:nssv15146181|nssv15146816|dbVar:nssv15606064|dbVar:nssv15146660|dbVar:nssv18841910|dbVar:nssv15161264|nssv15161582|dbVar:nssv15145917|dbVar:nssv15161283|dbVar:nssv15161284|dbVar:nssv15161070|dbVar:nssv15141976|dbVar:nssv15161050;po_P_loss_coord=8:10214-10197718|8:10214-8948469|8:10502-11142629|8:10502-7214947|8:158049-10939681|8:158049-11281408|8:158049-13309069|8:158049-14214722|8:158049-30187456|8:158049-9025197|8:158049-9393052|8:158049-9749574|8:158050-10965627|8:158050-18936715|8:161517-11516619|8:164985-10007227|8:176815-7753583|8:191531-10049105|8:191531-10315994|8:191531-10724642|8:191531-7752586|8:194618-7787444|8:360370-7334625|8:399894-23712417|8:2292236-27361796|8:3791728-11384448|8:7053187-12241152|8:7092360-12372324|8:7169491-12404062|8:7268820-11805960|8:7268820-11819316;po_P_loss_percent=5.73|6.53|5.25|0.63|5.42|5.25|4.44|4.16|1.95|6.59|6.32|6.09|5.40|3.11|5.14|5.93|7.71|5.93|5.77|5.55|7.71|7.69|2.37|2.51|2.33|7.69|11.26|11.06|11.16|10.68|10.65;B_gain_source=DDD:26674|TS40:ISCA-37472|esv2761169|esv2764098,DDD:26670|DDD:26674|DDD:26675|DDD:26682|TS40:ISCA-37472|esv2761169|esv2764098,DDD:26670|DDD:26674|DDD:26675|DDD:26682|TS40:ISCA-37472|esv2761169|esv2764098,DDD:26670|DDD:26674|DDD:26675|DDD:26682|TS40:ISCA-37472|esv2761169|esv2764098,DDD:26670|DDD:26674|DDD:26675|DDD:26682|TS40:ISCA-37472|esv2761169|esv2764098,DDD:26674|DDD:26675|DDD:26689|TS40:ISCA-37472|esv2761169|esv2764098,DDD:26674|DDD:26675|DDD:26689|TS40:ISCA-37472|dgv6936n100|esv2761169|esv2764098|nsv515100,DDD:26674|DDD:26675|DDD:26689|TS40:ISCA-37472|dgv6936n100|esv2761169|esv2764098|nsv515100,DDD:26674|DDD:26675|DDD:26689|TS40:ISCA-37472|dgv6936n100|esv2761169|esv2764098|nsv515100,DDD:26674|DDD:26675|DDD:26689|TS40:ISCA-37472|dgv6936n100|esv2761169|esv2764098|nsv515100,DDD:26674|DDD:26675|DDD:26689|TS40:ISCA-37472|dgv6936n100|esv2761169|esv2764098|nsv515100,DDD:26674|DDD:26675|DDD:26689|TS40:ISCA-37472|dgv6936n100|esv2761169|esv2764098|nsv515100,DDD:26674|DDD:26675|DDD:26689|TS40:ISCA-37472|dgv6936n100|esv2761169|esv2764098|nsv515100,DDD:26674|DDD:26675|TS40:ISCA-37472|dgv6936n100|esv2761169|esv2764098|nsv515100,DDD:26674|DDD:26675|DDD:26720|TS40:ISCA-37472|dgv6936n100|esv2761169|esv2764098,DDD:26674|DDD:26720|TS40:ISCA-37472|dgv6936n100|esv2761169|esv2764098,DDD:26674|DDD:26720|TS40:ISCA-37472|dgv6936n100|esv2761169|esv2764098,DDD:26674|TS40:ISCA-37472|dgv6936n100|esv2761169|esv2764098,DDD:26674|TS40:ISCA-37472|dgv6936n100|esv2761169|esv2764098,DDD:26674|TS40:ISCA-37472|dgv6936n100|esv2761169|esv2764098,DDD:26674|TS40:ISCA-37472|dgv6936n100|esv2761169|esv2764098,DDD:26674|TS40:ISCA-37472|dgv6936n100|esv2761169|esv2764098,DDD:26674|TS40:ISCA-37472|dgv6936n100|esv2761169|esv2764098,DDD:26674|TS40:ISCA-37472|dgv6936n100|esv2761169|esv2764098,DDD:26674|TS40:ISCA-37472|dgv6936n100|esv2761169|esv2764098,DDD:26674|DDD:26727|DDD:26729|TS40:ISCA-37472|dgv6936n100|esv2761169|esv2764098,DDD:26674|DDD:26727|DDD:26729|TS40:ISCA-37472|dgv6936n100|esv2761169|esv2764098,DDD:26674|DDD:26727|DDD:26729|TS40:ISCA-37472|dgv6936n100|esv2761169|esv2764098,DDD:26674|DDD:26727|DDD:26729|TS40:ISCA-37472|dgv6936n100|esv2761169|esv2764098,DDD:26674|DDD:26727|DDD:26729|TS40:ISCA-37472|dgv6936n100|esv2761169|esv2764098,DDD:26674|DDD:26727|DDD:26729|TS40:ISCA-37472|dgv6936n100|esv2761169|esv2764098,DDD:26674|DDD:26727|DDD:26729|DDD:26742|DDD:26743|TS40:ISCA-37472|TS40:ISCA-46381|dgv6936n100|esv2761169|esv2764098|gnomAD-SV_v2.1_DUP_8_23708,DDD:26674|DDD:26727|DDD:26729|DDD:26742|DDD:26743|TS40:ISCA-37472|dgv6936n100|esv2761169|esv2764098;B_gain_coord=8:6858816-8072303|8:6959834-8600711|8:7024892-8031414|8:7053187-8130689,8:6858816-8072303|8:6959834-8600711|8:6985776-7230992|8:7024892-8031414|8:7035907-7428513|8:7053187-8130689|8:7154889-7213289,8:6858816-8072303|8:6959834-8600711|8:6985776-7230992|8:7024892-8031414|8:7035907-7428513|8:7053187-8130689|8:7154889-7213289,8:6858816-8072303|8:6959834-8600711|8:6985776-7230992|8:7024892-8031414|8:7035907-7428513|8:7053187-8130689|8:7154889-7213289,8:6858816-8072303|8:6959834-8600711|8:6985776-7230992|8:7024892-8031414|8:7035907-7428513|8:7053187-8130689|8:7154889-7213289,8:6858816-8072303|8:6959834-8600711|8:7024892-8031414|8:7035907-7428513|8:7053187-8130689|8:7201176-7392220,8:6858816-8072303|8:6959834-8600711|8:7024892-8031414|8:7035907-7428513|8:7053187-8130689|8:7201176-7392220|8:7241528-7403182|8:7250369-7832042,8:6858816-8072303|8:6959834-8600711|8:7024892-8031414|8:7035907-7428513|8:7053187-8130689|8:7201176-7392220|8:7241528-7403182|8:7250369-7832042,8:6858816-8072303|8:6959834-8600711|8:7024892-8031414|8:7035907-7428513|8:7053187-8130689|8:7201176-7392220|8:7241528-7403182|8:7250369-7832042,8:6858816-8072303|8:6959834-8600711|8:7024892-8031414|8:7035907-7428513|8:7053187-8130689|8:7201176-7392220|8:7241528-7403182|8:7250369-7832042,8:6858816-8072303|8:6959834-8600711|8:7024892-8031414|8:7035907-7428513|8:7053187-8130689|8:7201176-7392220|8:7241528-7403182|8:7250369-7832042,8:6858816-8072303|8:6959834-8600711|8:7024892-8031414|8:7035907-7428513|8:7053187-8130689|8:7201176-7392220|8:7241528-7403182|8:7250369-7832042,8:6858816-8072303|8:6959834-8600711|8:7024892-8031414|8:7035907-7428513|8:7053187-8130689|8:7201176-7392220|8:7241528-7403182|8:7250369-7832042,8:6858816-8072303|8:6959834-8600711|8:7024892-8031414|8:7035907-7428513|8:7053187-8130689|8:7241528-7403182|8:7250369-7832042,8:6858816-8072303|8:6959834-8600711|8:7024892-8031414|8:7035907-7428513|8:7053187-8130689|8:7250369-7832042|8:7401394-7472190,8:6858816-8072303|8:6959834-8600711|8:7024892-8031414|8:7053187-8130689|8:7250369-7832042|8:7401394-7472190,8:6858816-8072303|8:6959834-8600711|8:7024892-8031414|8:7053187-8130689|8:7250369-7832042|8:7401394-7472190,8:6858816-8072303|8:6959834-8600711|8:7024892-8031414|8:7053187-8130689|8:7250369-7832042,8:6858816-8072303|8:6959834-8600711|8:7024892-8031414|8:7053187-8130689|8:7250369-7832042,8:6858816-8072303|8:6959834-8600711|8:7024892-8031414|8:7053187-8130689|8:7250369-7832042,8:6858816-8072303|8:6959834-8600711|8:7024892-8031414|8:7053187-8130689|8:7250369-7832042,8:6858816-8072303|8:6959834-8600711|8:7024892-8031414|8:7053187-8130689|8:7250369-7832042,8:6858816-8072303|8:6959834-8600711|8:7024892-8031414|8:7053187-8130689|8:7250369-7832042,8:6858816-8072303|8:6959834-8600711|8:7024892-8031414|8:7053187-8130689|8:7250369-7832042,8:6858816-8072303|8:6959834-8600711|8:7024892-8031414|8:7053187-8130689|8:7250369-7832042,8:6858816-8072303|8:6959834-8600711|8:7024892-8031414|8:7053187-8130689|8:7250369-7832042|8:7632945-7856630|8:7634705-7829839,8:6858816-8072303|8:6959834-8600711|8:7024892-8031414|8:7053187-8130689|8:7250369-7832042|8:7632945-7856630|8:7634705-7829839,8:6858816-8072303|8:6959834-8600711|8:7024892-8031414|8:7053187-8130689|8:7250369-7832042|8:7632945-7856630|8:7634705-7829839,8:6858816-8072303|8:6959834-8600711|8:7024892-8031414|8:7053187-8130689|8:7250369-7832042|8:7632945-7856630|8:7634705-7829839,8:6858816-8072303|8:6959834-8600711|8:7024892-8031414|8:7053187-8130689|8:7250369-7832042|8:7632945-7856630|8:7634705-7829839,8:6858816-8072303|8:6959834-8600711|8:7024892-8031414|8:7053187-8130689|8:7250369-7832042|8:7632945-7856630|8:7634705-7829839,8:6858816-8072303|8:6959834-8600711|8:7024892-8031414|8:7053187-8130689|8:7250369-7832042|8:7632945-7856630|8:7634705-7829839|8:7718891-7784263|8:7734213-7856702|8:7737000-7743100|8:7737000-7743100,8:6858816-8072303|8:6959834-8600711|8:7024892-8031414|8:7053187-8130689|8:7250369-7832042|8:7632945-7856630|8:7634705-7829839|8:7718891-7784263|8:7734213-7856702;B_gain_AFmax=0.2355;B_loss_source=DDD:26674|HI40:ISCA-37472|esv2761169|esv2764098,DDD:26670|DDD:26674|DDD:26675|DDD:26682|HI40:ISCA-37472|dbVar|esv2761169|esv2764098,DDD:26670|DDD:26674|DDD:26675|DDD:26682|DDD:26683|HI40:ISCA-37472|dbVar|esv2675221|esv2761169|esv2764098,DDD:26670|DDD:26674|DDD:26675|DDD:26682|HI40:ISCA-37472|dbVar|esv2761169|esv2764098,DDD:26670|DDD:26674|DDD:26675|DDD:26682|DDD:26687|HI40:ISCA-37472|dbVar|esv2761169|esv2764098,DDD:26674|DDD:26675|HI40:ISCA-37472|dbVar|esv2761169|esv2764098,DDD:26674|DDD:26675|HI40:ISCA-37472|dbVar|esv2761169|esv2764098,DDD:26674|DDD:26675|HI40:ISCA-37472|dbVar|esv2761169|esv2764098,DDD:26674|DDD:26675|HI40:ISCA-37472|dbVar|esv2761169|esv2764098,DDD:26674|DDD:26675|HI40:ISCA-37472|dbVar|esv2761169|esv2764098,DDD:26674|DDD:26675|HI40:ISCA-37472|dbVar|esv2761169|esv2764098,DDD:26674|DDD:26675|HI40:ISCA-37472|dbVar|esv2761169|esv2764098,DDD:26674|DDD:26675|HI40:ISCA-37472|dbVar|esv2761169|esv2764098,DDD:26674|DDD:26675|HI40:ISCA-37472|dbVar|esv2761169|esv2764098,DDD:26674|DDD:26675|DDD:26720|HI40:ISCA-37472|dbVar|esv2761169|esv2764098|gnomAD-SV_v2.1_DEL_8_89341|gnomAD-SV_v2.1_DEL_8_89342,DDD:26674|DDD:26720|HI40:ISCA-37472|dbVar|esv2761169|esv2764098|gnomAD-SV_v2.1_DEL_8_89342,DDD:26674|DDD:26720|HI40:ISCA-37472|dbVar|esv2761169|esv2764098|gnomAD-SV_v2.1_DEL_8_89342,DDD:26674|HI40:ISCA-37472|esv2761169|esv2764098,DDD:26674|HI40:ISCA-37472|esv2761169|esv2764098,DDD:26674|HI40:ISCA-37472|esv2761169|esv2764098,DDD:26674|HI40:ISCA-37472|esv2761169|esv2764098,DDD:26674|HI40:ISCA-37472|esv2761169|esv2764098,DDD:26674|HI40:ISCA-37472|esv2761169|esv2764098,DDD:26674|HI40:ISCA-37472|esv2761169|esv2764098,DDD:26674|HI40:ISCA-37472|esv2761169|esv2764098,DDD:26674|DDD:26727|HI40:ISCA-37472|esv2761169|esv2764098,DDD:26674|DDD:26727|HI40:ISCA-37472|esv2761169|esv2764098,DDD:26674|DDD:26727|HI40:ISCA-37472|esv2761169|esv2764098,DDD:26674|DDD:26727|HI40:ISCA-37472|esv2761169|esv2764098,DDD:26674|DDD:26727|HI40:ISCA-37472|esv2761169|esv2764098,DDD:26674|DDD:26727|HI40:ISCA-37472|esv2761169|esv2764098,DDD:26674|DDD:26727|HI40:ISCA-37472|HI40:ISCA-46380|dbVar|esv2761169|esv2764098|gnomAD-SV_v2.1_DEL_8_89353,DDD:26674|DDD:26727|HI40:ISCA-37472|HI40:ISCA-46380|HI40:ISCA-46382|dbVar|esv2761169|esv2764098|gnomAD-SV_v2.1_DEL_8_89353|gnomAD-SV_v2.1_DEL_8_89355;B_loss_coord=8:6858816-8072303|8:6959834-8600711|8:7024892-8031414|8:7053187-8130689,8:6858816-8072303|8:6959834-8600711|8:6985776-7230992|8:7024892-8031414|8:7035907-7428513|8:7053187-8130689|chr8:7085462-7537934|8:7154889-7213289,8:6858816-8072303|8:6959834-8600711|8:6985776-7230992|8:7024892-8031414|8:7035907-7428513|8:7053187-8130689|chr8:7085462-7537934|8:7154889-7213289|8:7158046-7189992|8:7158202-7189800,8:6858816-8072303|8:6959834-8600711|8:6985776-7230992|8:7024892-8031414|8:7035907-7428513|8:7053187-8130689|chr8:7085462-7537934|8:7154889-7213289,8:6858816-8072303|8:6959834-8600711|8:6985776-7230992|8:7024892-8031414|8:7035907-7428513|8:7053187-8130689|chr8:7085462-7537934|8:7154889-7213289|8:7190892-7196288,8:6858816-8072303|8:6959834-8600711|8:7024892-8031414|8:7035907-7428513|8:7053187-8130689|chr8:7085462-7537934,8:6858816-8072303|8:6959834-8600711|8:7024892-8031414|8:7035907-7428513|8:7053187-8130689|chr8:7085462-7537934,8:6858816-8072303|8:6959834-8600711|8:7024892-8031414|8:7035907-7428513|8:7053187-8130689|chr8:7085462-7537934,8:6858816-8072303|8:6959834-8600711|8:7024892-8031414|8:7035907-7428513|8:7053187-8130689|chr8:7085462-7537934,8:6858816-8072303|8:6959834-8600711|8:7024892-8031414|8:7035907-7428513|8:7053187-8130689|chr8:7085462-7537934,8:6858816-8072303|8:6959834-8600711|8:7024892-8031414|8:7035907-7428513|8:7053187-8130689|chr8:7085462-7537934,8:6858816-8072303|8:6959834-8600711|8:7024892-8031414|8:7035907-7428513|8:7053187-8130689|chr8:7085462-7537934,8:6858816-8072303|8:6959834-8600711|8:7024892-8031414|8:7035907-7428513|8:7053187-8130689|chr8:7085462-7537934,8:6858816-8072303|8:6959834-8600711|8:7024892-8031414|8:7035907-7428513|8:7053187-8130689|chr8:7085462-7537934,8:6858816-8072303|8:6959834-8600711|8:7024892-8031414|8:7035907-7428513|8:7053187-8130689|chr8:7085462-7537934|8:7401394-7472190|chr8:7402900-7419700|8:7402900-7419700|chr8:7405950-7443050|8:7405950-7443050,8:6858816-8072303|8:6959834-8600711|8:7024892-8031414|8:7053187-8130689|chr8:7085462-7537934|8:7401394-7472190|chr8:7405950-7443050|8:7405950-7443050,8:6858816-8072303|8:6959834-8600711|8:7024892-8031414|8:7053187-8130689|chr8:7085462-7537934|8:7401394-7472190|chr8:7405950-7443050|8:7405950-7443050,8:6858816-8072303|8:6959834-8600711|8:7024892-8031414|8:7053187-8130689,8:6858816-8072303|8:6959834-8600711|8:7024892-8031414|8:7053187-8130689,8:6858816-8072303|8:6959834-8600711|8:7024892-8031414|8:7053187-8130689,8:6858816-8072303|8:6959834-8600711|8:7024892-8031414|8:7053187-8130689,8:6858816-8072303|8:6959834-8600711|8:7024892-8031414|8:7053187-8130689,8:6858816-8072303|8:6959834-8600711|8:7024892-8031414|8:7053187-8130689,8:6858816-8072303|8:6959834-8600711|8:7024892-8031414|8:7053187-8130689,8:6858816-8072303|8:6959834-8600711|8:7024892-8031414|8:7053187-8130689,8:6858816-8072303|8:6959834-8600711|8:7024892-8031414|8:7053187-8130689|8:7632945-7856630,8:6858816-8072303|8:6959834-8600711|8:7024892-8031414|8:7053187-8130689|8:7632945-7856630,8:6858816-8072303|8:6959834-8600711|8:7024892-8031414|8:7053187-8130689|8:7632945-7856630,8:6858816-8072303|8:6959834-8600711|8:7024892-8031414|8:7053187-8130689|8:7632945-7856630,8:6858816-8072303|8:6959834-8600711|8:7024892-8031414|8:7053187-8130689|8:7632945-7856630,8:6858816-8072303|8:6959834-8600711|8:7024892-8031414|8:7053187-8130689|8:7632945-7856630,8:6858816-8072303|8:6959834-8600711|8:7024892-8031414|8:7053187-8130689|8:7632945-7856630|8:7736500-7764500|chr8:7736500-7764500|8:7736500-7764500,8:6858816-8072303|8:6959834-8600711|8:7024892-8031414|8:7053187-8130689|8:7632945-7856630|8:7736500-7764500|chr8:7736500-7764500|8:7736500-7764500|8:7745000-7754100|chr8:7745000-7754100|8:7745000-7754100;B_loss_AFmax=0.2237,0.2237,0.2237,0.2237,0.2237,0.2237,0.2237,0.2237,0.2237,0.2237,0.2237,0.2237,0.2237,0.2237,0.5803,0.4842,0.4842,0.2237,0.2237,0.2237,0.2237,0.2237,0.2237,0.2237,0.2237,0.2237,0.2237,0.2237,0.2237,0.2237,0.2237,0.3262,0.5182;po_B_gain_someG_source=8:6959834-8600711_esv2764098|8:7024892-8031414_DDD:26674|8:7053187-8130689_TS40:ISCA-37472|8:7170611-7177489_nsv515099|8:7201176-7392220_DDD:26689|8:7212583-7227421_1000g|8:7212583-7227421_TS40:ISCA-46631|8:7241528-7403182_nsv515100|8:7308244-7308706_DDD:26704|8:7632945-7856630_DDD:26727|8:7717878-7717938_DDD:26737|8:7734213-7856702_DDD:26743|8:7737000-7743100_gnomAD-SV_v2.1_DUP_8_23708|8:6959834-8600711_esv2764098|8:7024892-8031414_DDD:26674|8:7053187-8130689_TS40:ISCA-37472|8:7170611-7177489_nsv515099|8:7201176-7392220_DDD:26689|8:7212583-7227421_1000g|8:7212583-7227421_TS40:ISCA-46631...;po_B_gain_someG_coord=8:6858816-8072303_esv2761169|8:6985776-7230992_DDD:26670|8:7035907-7428513_DDD:26675|8:7154889-7213289_DDD:26682|8:7190891-7190961_DDD:26685|8:7212583-7227421_1000g|8:7212583-7227421_1000g|8:7212583-7227421_dgv1365e214|8:7250369-7832042_dgv6936n100|8:7401394-7472190_DDD:26720|8:7634705-7829839_DDD:26729|8:7718891-7784263_DDD:26742|8:7737000-7743100_TS40:ISCA-46381|8:6858816-8072303_esv2761169|8:6985776-7230992_DDD:26670|8:7035907-7428513_DDD:26675|8:7154889-7213289_DDD:26682|8:7190891-7190961_DDD:26685|8:7212583-7227421_1000g|8:7212583-7227421_1000g...;po_B_loss_someG_source=8:6959834-8600711_esv2764098|8:7024892-8031414_DDD:26674|8:7053187-8130689_HI40:ISCA-37472|8:7154889-7213289_DDD:26682|8:7158202-7189800_DDD:26683|chr8:7179582-7191032_dbVar|8:7179583-7191032_esv3616115|8:7190891-7190961_DDD:26685|chr8:7201000-7206400_dbVar|chr8:7204184-7204308_dbVar|8:7212583-7227421_1000g|chr8:7221359-7221602_dbVar|8:7228000-7235000_gnomAD-SV_v2.1_DEL_8_89335|chr8:7286205-7286328_dbVar|chr8:7326402-7326559_dbVar|8:7355000-7363000_gnomAD-SV_v2.1_DEL_8_89340|8:7355294-7364762_1000g|8:7401394-7472190_DDD:26720|8:7402900-7419700_gnomAD-SV_v2.1_DEL_8_89341|8:7405950-7443050_gnomAD-SV_v2.1_DEL_8_89342...;po_B_loss_someG_coord=8:6858816-8072303_esv2761169|8:6985776-7230992_DDD:26670|8:7035907-7428513_DDD:26675|chr8:7085462-7537934_dbVar|8:7158046-7189992_esv2675221|chr8:7175745-7175870_dbVar|8:7179583-7191032_1000g|chr8:7180382-7180743_dbVar|8:7190892-7196288_DDD:26687|8:7201000-7206400_gnomAD-SV_v2.1_DEL_8_89332|chr8:7212582-7227421_dbVar|8:7212583-7227421_esv3616116|chr8:7228000-7235000_dbVar|chr8:7276552-7277128_dbVar|8:7308244-7308706_DDD:26704|chr8:7355000-7363000_dbVar|chr8:7355293-7364762_dbVar|8:7355294-7364762_esv3616120|chr8:7402900-7419700_dbVar|chr8:7405950-7443050_dbVar...;GC_content_left=0.26;GC_content_right=0.33;SegDup_left=8:7150797-7184572|8:7150797-7195814|8:7150797-7200543|8:7150798-7238459;SegDup_right=8:7600001-7825413;ENCODE_blacklist_left=8:7012601-8066200;ENCODE_blacklist_characteristics_left=High_Signal_Region;ENCODE_blacklist_right=8:7012601-8066200;ENCODE_blacklist_characteristics_right=High_Signal_Region;DDD_HI_percent=99.72,.,.,.,.,91.1,99.72,85.97,89.4,95.66,93.29,90.95,91.71,.,.,.,.,.,.,.,.,.,.,.,.,.,92.48,90.61,90.45,96.98,97.15,93.4,97.87;ExAC_synZ=2.14121257165536,.,.,.,.,-1.59751875296103,.,.,2.14121257165536,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,0.918523398770926,0.676417083229402,1.33624136747443,0.140072348156658,.,1.12959151611996;ExAC_misZ=2.19863945242443,.,.,.,.,-3.97736276921453,.,.,1.8677219993927,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,0.008093353918723,1.6332400949348,2.19863945242443,0.903069021299127,.,0.758429673080804;NCBI_gene_ID=.,100128890,641517,401447,645402,100131980,100289462,55894,10407,503618,503841,504180,503614,100131608,441317,645558,645572,645651,441326,441323,441324,728746,728753,441327,441328,100133251,245910,245908,245909,140596,653423,414325,1673;HGNC_gene_ID=.,HGNC:28890,HGNC:33469,HGNC:37182,HGNC:37176,HGNC:37134,HGNC:30193,HGNC:31702,HGNC:14534,HGNC:26165,HGNC:28879,HGNC:29930,HGNC:31918,HGNC:49420,HGNC:32255,HGNC:32270,HGNC:32271,HGNC:32262,HGNC:32266,HGNC:32264,HGNC:32256,HGNC:32265,HGNC:32267,HGNC:32257,HGNC:32258,HGNC:49396,HGNC:18086,HGNC:18087,HGNC:18088,HGNC:18115,HGNC:33342,HGNC:15967,HGNC:2767;LOEUF_bin=8,.,.,.,.,9,9,.,9,9,9,9,.,8,.,.,.,.,.,.,.,.,.,.,.,.,9,8,9,9,9,.,9;GnomAD_pLI=0.4218,.,.,.,.,1.6471e-08,0.067977,.,0.027751,0.33176,0.081151,0.29184,.,0.4218,.,.,.,.,.,.,.,.,.,.,.,.,0.32633,0.37719,0.0085821,0.093748,6.9645e-05,.,0.0011637;ExAC_pLI=0.51947,.,.,.,.,4.2486e-09,.,.,0.047238,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,0.43625,0.40931,0.51947,0.039012,.,0.39981;AnnotSV_ranking_score=-1;AnnotSV_ranking_criteria=1A_(cf_Gene_count,_RE_gene,_+0.00)|2D_(cf_B_gain_source,_-1.00)|2B_(cf_po_P_gain_source,_TS,_OMIM_morbid,_+0.00)|2E_(cf_B_gain_source,_+0.00)|2L_(DEFB4A/FAM66B,_+0.00)|3A_(32_genes,_+0.00)|4O_(cf_po_B_gain_AllG_source,_B_gain_source,_po_B_gain_SomeG_source,_+0.00)|5F_(+0.00);ACMG_class=1,full=1,full=1,full=1,full=1,full=1,full=1,full=1,full=1,full=1,full=1,full=1,full=1,full=1,full=1,full=1,full=1,full=1,full=1,full=1,full=1,full=1,full=1,full=1,full=1,full=1,full=1,full=1,full=1,full=1,full=1,full=1,full=1;END=7753583;SVLEN=584093\tGT\t1/.\n8\t56986130\t.\tT\t<DEL>\t.\tPASS\tAnnotSV_ID=8_56986130_57169684_DEL_1;SV_start=56986130;Biologist_annotation=VOUS_in_2017,_reclassified_in_2020;Biologist_ranking=Pathogenic;Annotation_mode=full,split,split,split,split,split,split;CytoBand=q12.1;Gene_name=RPS20|SNORD54|CERNA3|MOS|PLAG1|CHCHD7,RPS20,SNORD54,CERNA3,MOS,PLAG1,CHCHD7;Closest_left=SNORA1B;Closest_right=SDR16C5;Gene_count=6;Tx=.,NM_001146227,NR_002437,NR_149110,NM_005372,NM_001114634,NM_001011668;Tx_version=.,3,1,1,1,2,3;Tx_start=.,56979812,56986397,56987150,57025500,57073467,57124347;Tx_end=.,56987065,56986460,56987833,57026541,57123832,57131368;Overlapped_tx_length=.,936,63,683,1041,50365,7021;Overlapped_CDS_length=.,177,0,0,1041,1503,333;Overlapped_CDS_percent=.,41,0,0,100,100,100;Frameshift=.,no,.,.,no,no,no;Exon_count=.,6,1,2,1,4,5;Location=.,txStart-intron3,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd;Location2=.,5'UTR-CDS,UTR,UTR,5'UTR-3'UTR,5'UTR-3'UTR,5'UTR-3'UTR;Dist_nearest_SS=.,124,.,.,.,.,.;Nearest_SS_type=.,5',.,.,.,.,.;Intersect_start=.,56986129,56986397,56987150,57025500,57073467,57124347;Intersect_end=.,56987065,56986460,56987833,57026541,57123832,57131368;RE_gene=LYN_(morbid/RE=ABC_enhancer+EA_enhancer+GH_enhancer+GH_promoter_enhancer);P_loss_phen=Adenomas,_salivary_gland_pleomorphic,_somatic,_181030_(3)|Silver-Russell_syndrome_4,_618907_(3)_AD|Oocyte|zygote|embryo_maturation_arrest_20,_620383_(3)_AR,.,.,.,Oocyte|zygote|embryo_maturation_arrest_20,_620383_(3)_AR,Adenomas,_salivary_gland_pleomorphic,_somatic,_181030_(3)|Silver-Russell_syndrome_4,_618907_(3)_AD,.;P_loss_source=morbid:MOS|morbid:PLAG1,.,.,.,morbid:MOS,morbid:PLAG1,.;P_loss_coord=8:57025501-57026541|8:57073468-57123832,.,.,.,8:57025501-57026541,8:57073468-57123832,.;po_P_gain_source=dbVar:nssv15169207|dbVar:nssv15128680|dbVar:nssv15161801|nssv15777239|nssv17976962|dbVar:nssv15161417|nssv15161657|dbVar:nssv15161846|dbVar:nssv15169210|dbVar:nssv15161105|dbVar:nssv15161269|dbVar:nssv15161748|dbVar:nssv15161087|dbVar:nssv15161426|dbVar:nssv15161357|dbVar:nssv15777249|dbVar:nssv15147495|dbVar:nssv15774700|dbVar:nssv15161758|dbVar:nssv15161797|dbVar:nssv15139743|dbVar:nssv15135704;po_P_gain_coord=8:10214-146293414|8:13939-146304022|8:158049-146295771|8:158050-146295771|8:158992-146280828|8:164985-146293414|8:176453-146294098|8:191531-146274835|8:191531-146280020|8:191606-146280167|8:12491000-146295771|8:21149034-146295771|8:31936552-146295771|8:36437622-60531557|8:39555658-64049089|8:46942957-70216022|8:46942963-140297737|8:53436132-65195953|8:56228415-65864987;po_P_gain_percent=0.13|0.13|0.13|0.13|0.13|0.13|0.13|0.13|0.13|0.13|0.14|0.15|0.16|0.76|0.75|0.79|0.20|1.56|1.90;po_P_loss_source=dbVar:nssv15167540|dbVar:nssv15148967|dbVar:nssv15138741|dbVar:nssv15125104|dbVar:nssv15137960|dbVar:nssv15137390|dbVar:nssv15121489|dbVar:nssv15124419;po_P_loss_coord=8:49822484-58822602|8:50384338-58738029|8:54237950-62775577|8:54407102-58403572|8:55677511-57697858|8:55733918-62058861|8:56335974-59749312|8:56405321-57358911;po_P_loss_percent=2.04|2.20|2.15|4.59|9.09|2.90|5.38|19.25;po_B_gain_someG_coord=8:57048633-57098412_1000g;po_B_loss_someG_source=chr8:56988070-56988448_dbVar|8:56988698-56989817_1000g|8:56988746-56989825_DDD:27790|chr8:56988762-56997935_dbVar|chr8:57005850-57007074_dbVar|chr8:57059737-57063078_dbVar|chr8:57160128-57168353_dbVar|chr8:57161314-57168512_dbVar;po_B_loss_someG_coord=chr8:56988017-57000275_dbVar|chr8:56988697-56989817_dbVar|chr8:56988709-56997905_dbVar|chr8:56988754-56989776_dbVar|8:56988763-56997935_1000g|chr8:57047231-57047490_dbVar|chr8:57154268-57155609_dbVar|chr8:57161113-57168156_dbVar;GC_content_left=0.41;GC_content_right=0.33;Repeat_coord_right=8:57169736-57169990;Repeat_type_right=AluSz6;HI=.,0,.,.,.,.,.;TS=.,0,.,.,.,.,.;DDD_HI_percent=78.38,29.1,.,.,78.38,15.18,47.62;ExAC_delZ=0.98432298330431,0.98432298330431,.,.,0.159444434408663,0.393657994766781,0.447428062348521;ExAC_dupZ=0.46663829854876,-0.0464637247715686,.,.,0.46663829854876,-2.53125239294469,0.400234098889925;ExAC_cnvZ=0.586548999968454,0.36681079114905,.,.,0.524682444320288,-2.47162789907313,0.586548999968454;ExAC_synZ=2.2343517715388,-0.0133102053832282,.,.,2.2343517715388,-0.349819812502603,-0.725400991144389;ExAC_misZ=2.48184869967673,2.09183372030708,.,.,2.48184869967673,1.96019845356841,-0.857804306808559;GenCC_disease=.,Diamond-Blackfan_anemia|Lynch_syndrome|familial_colorectal_cancer|familial_colorectal_cancer_type_X|hereditary_nonpolyposis_colon_cancer,.,.,oocyte/zygote/embryo_maturation_arrest_20,silver-russell_syndrome_4,.;GenCC_moi=.,AD,.,.,.,AD,.;GenCC_classification=.,Limited|Moderate|Supportive,.,.,Limited,Moderate|Strong,.;GenCC_pmid=.,24941021[PMID]|32790018[PMID],.,.,34779126|34997960|35670744,15606491|28796236|32546215,.;NCBI_gene_ID=.,6224,26795,105375847,4342,5324,79145;HGNC_gene_ID=.,HGNC:10405,HGNC:10204,HGNC:53469,HGNC:7199,HGNC:9045,HGNC:28314;OMIM_ID=190060|603026,.,.,.,190060,603026,.;OMIM_phenotype=.,.,.,.,Oocyte/zygote/embryo_maturation_arrest_20,_620383_(3)_AR,Adenomas,_salivary_gland_pleomorphic,_somatic,_181030_(3)|Silver-Russell_syndrome_4,_618907_(3)_AD,.;OMIM_inheritance=.,.,.,.,AR,AD,.;OMIM_morbid=yes,.,.,.,yes,yes,.;LOEUF_bin=0,5,.,.,3,0,6;GnomAD_pLI=0.99532,0.020686,.,.,0.58928,0.99532,0.034885;ExAC_pLI=0.82992,0.68632,.,.,0.14931,0.82992,0.38798;AnnotSV_ranking_score=1;AnnotSV_ranking_criteria=1A_(cf_Gene_count,_RE_gene,_+0.00)|2A_(cf_P_loss_source,_+1.00)|3A_(6_genes,_+0.00)|5F_(+0.00);ACMG_class=5,full=5,full=5,full=5,full=5,full=5,full=5;END=57169684;SVLEN=-183555\tGT\t1/.\n8\t141035364\t.\tG\t<DEL>\t.\tPASS\tAnnotSV_ID=8_141035364_141061798_DEL_1;SV_start=141035364;Biologist_annotation=DI_AR;Biologist_ranking=Pathogenic;Annotation_mode=full,split;CytoBand=q24.3;Gene_name=TRAPPC9;Closest_left=C8orf17;Closest_right=PEG13;Gene_count=1;Tx=.,NM_001160372;Tx_version=.,4;Tx_start=.,140739967;Tx_end=.,141467843;Overlapped_tx_length=.,26435;Overlapped_CDS_length=.,0;Overlapped_CDS_percent=.,0;Exon_count=.,23;Location=.,intron17-intron17;Location2=.,CDS;Dist_nearest_SS=.,1187;Nearest_SS_type=.,3';Intersect_start=.,141035363;Intersect_end=.,141061798;RE_gene=KCNK9_(morbid/RE=ABC_enhancer+GH_enhancer);po_P_gain_source=dbVar:nssv15169207|dbVar:nssv15128680|dbVar:nssv15161801|nssv15777239|nssv17976962|dbVar:nssv15161417|nssv15161657|dbVar:nssv15161846|dbVar:nssv15169210|dbVar:nssv15161105|dbVar:nssv15161269|dbVar:nssv15161748|dbVar:nssv15161087|dbVar:nssv15161426|dbVar:nssv15161357|dbVar:nssv15777249|dbVar:nssv18326351|dbVar:nssv17970300|dbVar:nssv15161337|dbVar:nssv15161103|dbVar:nssv17977109|dbVar:nssv15161374|dbVar:nssv15161674|dbVar:nssv15161669|dbVar:nssv15161791|dbVar:nssv15161680|dbVar:nssv15161065|dbVar:nssv17976072|dbVar:nssv15161091|dbVar:nssv15161853|dbVar:nssv15161352|dbVar:nssv15161104|dbVar:nssv15161722|dbVar:nssv15161428|dbVar:nssv16208199|dbVar:nssv15162410|dbVar:nssv15773510|dbVar:nssv15774288|dbVar:nssv15161330|dbVar:nssv15161750|dbVar:nssv16206976|dbVar:nssv15161266|dbVar:nssv17970325|dbVar:nssv15131822|dbVar:nssv18841906|dbVar:nssv15161331|dbVar:nssv15143620|dbVar:nssv15161849|dbVar:nssv15775349|dbVar:nssv15161867|dbVar:nssv15775091|dbVar:nssv15161075|dbVar:nssv15161551;po_P_gain_coord=8:10214-146293414|8:13939-146304022|8:158049-146295771|8:158050-146295771|8:158992-146280828|8:164985-146293414|8:176453-146294098|8:191531-146274835|8:191531-146280020|8:191606-146280167|8:12491000-146295771|8:21149034-146295771|8:31936552-146295771|8:68912433-146295771|8:70382991-146295771|8:78392287-146294098|8:79526313-146280020|8:84712254-146295771|8:86778229-146295771|8:86841155-146295771|8:86841229-142689874|8:88943381-146294098|8:93047483-141355635|8:95694383-146294042|8:96496504-146295711|8:98395102-146295771|8:98432251-146222672|8:101879572-146295771|8:104318565-146294098|8:114592632-146280020|8:114853127-146295771|8:121042468-146295771|8:121694650-146295771|8:122193547-146295771|8:125496224-146295771|8:125510740-146294098|8:125526332-146280020|8:128877996-146295771|8:129233159-146274835|8:130863094-146295771|8:131127765-142238309|8:131138344-143473913|8:131651429-146294098|8:131682564-146280020|8:134825278-146280828|8:136059860-146295771|8:136378790-146295771|8:139188798-146295771|8:140016462-146274835|8:140249068-146294098;po_P_gain_percent=0.02|0.02|0.02|0.02|0.02|0.02|0.02|0.02|0.02|0.02|0.02|0.02|0.02|0.03|0.03|0.04|0.04|0.04|0.04|0.04|0.05|0.05|0.05|0.05|0.05|0.06|0.06|0.06|0.06|0.08|0.08|0.10|0.11|0.11|0.13|0.13|0.13|0.15|0.16|0.17|0.24|0.21|0.18|0.18|0.23|0.26|0.27|0.37|0.42|0.44;po_P_loss_phen=Intellectual_developmental_disorder,_AR_13,_613192_(3)_AR;po_P_loss_source=dbVar:nssv16208202|dbVar:nssv15127815|morbid:TRAPPC9;po_P_loss_coord=8:126892815-143750028|8:127638607-144388560|8:140739968-141468678;po_P_loss_percent=0.16|0.16|3.63;B_loss_source=dbVar;B_loss_coord=chr8:140980774-141135131;B_loss_AFmax=0.01;po_B_loss_someG_source=chr8:141040435-141042904_dbVar;po_B_loss_someG_coord=chr8:140980774-141135131_dbVar;GC_content_left=0.535;GC_content_right=0.38;Repeat_coord_left=8:141035378-141035461|8:141035462-141035486;Repeat_type_left=MER58C|(CAAAA)n;HI=.,30;TS=.,0;DDD_HI_percent=53.39;ExAC_delZ=0.107633755409335;ExAC_dupZ=-1.97676981971355;ExAC_cnvZ=-1.34878674017516;ExAC_synZ=-0.190632175596259;ExAC_misZ=1.58912949219012;GenCC_disease=.,autosomal_recessive_non-syndromic_intellectual_disability|intellectual_disability,_autosomal_recessive_13|intellectual_disability-obesity-brain_malformations-facial_dysmorphism_syndrome;GenCC_moi=.,AR;GenCC_classification=.,Definitive|Moderate|Strong|Supportive;GenCC_pmid=.,2000476|20004763|20004764|20004765|20004765[PMID]_20004763[PMID]_20004765[PMID]|22549410|22549410[PMID];NCBI_gene_ID=.,83696;HGNC_gene_ID=.,HGNC:30832;OMIM_ID=611966;OMIM_phenotype=.,Intellectual_developmental_disorder,_AR_13,_613192_(3)_AR;OMIM_inheritance=.,AR;OMIM_morbid=yes;LOEUF_bin=3;GnomAD_pLI=2.2898e-14;ExAC_pLI=5.7604e-06;AnnotSV_ranking_score=-1;AnnotSV_ranking_criteria=1A_(cf_Gene_count,_RE_gene,_+0.00)|2F/4O_(cf_B_loss_source,_-1.00)|2B_(cf_po_P_loss_source,_HI,_OMIM_morbid,_+0.00|3A_(1_gene,_+0.00)|5F_(+0.00);ACMG_class=1,full=1;END=141061798;SVLEN=-26435\tGT\t1/.\n10\t46976158\t.\tG\t<DUP>\t.\tPASS\tAnnotSV_ID=10_46976158_47590995_DUP_1;SV_start=46976158;Biologist_ranking=Benign;Annotation_mode=full,split,split,split,split,split,split,split,split,split;CytoBand=q11.22;Gene_name=GPRIN2|NPY4R|LINC00842|HNRNPA1P33|ANXA8L1|FAM25BP|AGAP14P|SHLD2P3|ANTXRLP1,GPRIN2,NPY4R,LINC00842,HNRNPA1P33,ANXA8L1,FAM25BP,AGAP14P,SHLD2P3,ANTXRLP1;Closest_left=SYT15;Closest_right=LOC105378577;Gene_count=9;Tx=.,NM_001385287,NM_001278794,NR_033957,NR_003277,NM_001098845,NR_104039,NR_165820,NR_027634,NR_103827;Tx_version=.,1,2,2,2,3,1,1,1,1;Tx_start=.,46992020,47083456,47096453,47133334,47157988,47177206,47192907,47379719,47590260;Tx_end=.,47007881,47088320,47151400,47133898,47173994,47181688,47213477,47421238,47640844;Overlapped_tx_length=.,15861,4864,54947,564,16006,4482,20570,41519,735;Overlapped_CDS_length=.,1449,1128,0,0,984,0,0,0,0;Overlapped_CDS_percent=.,100,73,0,0,100,0,0,0,0;Frameshift=.,no,no,.,.,no,.,.,.,.;Exon_count=.,4,2,4,1,12,3,8,7,5;Location=.,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,intron4-txEnd;Location2=.,5'UTR-3'UTR,5'UTR-3'UTR,UTR,UTR,5'UTR-3'UTR,UTR,UTR,UTR,UTR;Dist_nearest_SS=.,.,.,.,.,.,.,.,.,53;Nearest_SS_type=.,.,.,.,.,.,.,.,.,3';Intersect_start=.,46992020,47083456,47096453,47133334,47157988,47177206,47192907,47379719,47590260;Intersect_end=.,47007881,47088320,47151400,47133898,47173994,47181688,47213477,47421238,47590995;RE_gene=GDF2_(morbid/RE=ABC_enhancer);po_P_gain_source=dbVar:nssv15171419|dbVar:nssv15161644|dbVar:nssv15171420|dbVar:nssv15161671|dbVar:nssv15161670|nssv15161864|dbVar:nssv18830975|dbVar:nssv15148987|dbVar:nssv15146649|dbVar:nssv15148014|dbVar:nssv15147999|dbVar:nssv15127252|dbVar:nssv15149138|dbVar:nssv15160810|dbVar:nssv15153822|dbVar:nssv18329611|dbVar:nssv15157044|dbVar:nssv15774462;po_P_gain_coord=10:73233-135524321|10:93298-135378918|10:98088-135477883|10:100027-50961640|10:100028-135427143|10:11138693-135427143|10:42607636-69160433|10:42890650-52636819|10:43180755-75475666|10:43379743-54025077|10:43957497-55681185|10:46242058-51595050|10:46591858-51028871|10:46966534-51822386|10:46966535-51903756|10:47049548-51903662|10:47148814-51626260;po_P_gain_percent=0.45|0.45|0.45|1.21|0.45|0.49|2.32|6.31|1.90|5.78|5.24|11.49|13.86|12.66|12.45|11.15|9.88;po_P_loss_source=dbVar:nssv18830989|dbVar:nssv18792766|dbVar:nssv15148974|dbVar:nssv15147055|dbVar:nssv15147325|dbVar:nssv15149769|dbVar:nssv15153824|dbVar:nssv15775323|dbVar:nssv18330284|dbVar:nssv18842061|dbVar:nssv18326311|dbVar:nssv15152293|dbVar:nssv15147381|dbVar:nssv15149118|dbVar:nssv15148000|dbVar:nssv15148874|dbVar:nssv15605856|dbVar:nssv17976988|dbVar:nssv16252224|dbVar:nssv15153821|dbVar:nssv15155360|dbVar:nssv15153823|nssv15775280|dbVar:nssv15149894|dbVar:nssv18330270|dbVar:nssv15151095|dbVar:nssv15150620|dbVar:nssv16596271|dbVar:nssv16254627;po_P_loss_coord=10:12829207-135427143|10:46200157-51028871|10:46205691-51330432|10:46205691-51911085|10:46205697-51724915|10:46224447-51594991|10:46225365-51874356|10:46235358-51874163|10:46269494-51874356|10:46284270-51870080|10:46287822-51627470|10:46287822-51861565|10:46476966-51724915|10:46491170-51081560|10:46491170-51594991|10:46491170-51664079|10:46544811-51743471|10:46576516-51680164|10:46964974-51826226|10:46966534-51700837|10:46966534-51874356|10:46966534-51903755|10:46966534-51903756|10:46966535-51700837|10:46966535-51822386|10:46966535-51903756|10:46966536-51874356|10:47132306-51627470;po_P_loss_percent=0.50|12.73|12.00|10.78|11.14|11.45|10.88|10.90|10.97|11.01|11.51|11.03|11.72|13.39|12.05|11.89|11.83|12.05|12.65|12.99|12.53|12.45|12.45|12.99|12.66|12.45|12.53|10.20;B_gain_source=DDD:32922|dgv221e212|dgv24e55|nsv516485,1000g|DDD:32922|DDD:32934|DDD:32936|DDD:32937|dgv116e214|dgv221e212|dgv22e55|dgv24e55|nsv516485,DDD:32922|DDD:32934|DDD:32936|DDD:32937|dgv221e212|dgv22e55|dgv24e55|nsv516485,DDD:32922|DDD:32936|DDD:32937|dgv221e212|dgv24e55|nsv516485,1000g|DDD:32922|DDD:32934|DDD:32936|DDD:32937|dgv118e214|dgv221e212|dgv22e55|dgv24e55|nsv516485,DDD:32922|DDD:32936|DDD:32937|dgv221e212|dgv24e55|nsv516485,DDD:32922|DDD:32936|DDD:32937|dgv221e212|dgv24e55|nsv516485,DDD:32922|DDD:32936|dgv221e212|dgv24e55|nsv516485,DDD:32922|dgv221e212|dgv24e55|nsv516485,1000g|DDD:32922|DDD:32970|DDD:32972|TS40:ISCA-46639|dgv120e214|dgv221e212|dgv24e55|dgv85n27|esv2421526|gnomAD-SV_v2.1_DUP_10_29734|nsv516485;B_gain_coord=10:46109534-48312291|10:46416327-47756284|10:46943378-47742094|10:46966535-48298893,10:46109534-48312291|10:46416327-47756284|10:46923704-47138897|10:46931463-47389066|10:46931470-47201116|10:46943378-47136996|10:46943378-47742094|10:46966535-48298893|10:46976293-47023561|10:46976293-47023561|10:46976293-47023561|10:46976293-47023561,10:46109534-48312291|10:46416327-47756284|10:46923704-47138897|10:46931463-47389066|10:46931470-47201116|10:46943378-47136996|10:46943378-47742094|10:46966535-48298893,10:46109534-48312291|10:46416327-47756284|10:46931463-47389066|10:46931470-47201116|10:46943378-47742094|10:46966535-48298893,10:46109534-48312291|10:46416327-47756284|10:46923704-47138897|10:46931463-47389066|10:46931470-47201116|10:46943378-47136996|10:46943378-47742094|10:46966535-48298893|10:47089973-47150813|10:47089973-47150813|10:47089973-47150813|10:47089973-47150813,10:46109534-48312291|10:46416327-47756284|10:46931463-47389066|10:46931470-47201116|10:46943378-47742094|10:46966535-48298893,10:46109534-48312291|10:46416327-47756284|10:46931463-47389066|10:46931470-47201116|10:46943378-47742094|10:46966535-48298893,10:46109534-48312291|10:46416327-47756284|10:46931463-47389066|10:46943378-47742094|10:46966535-48298893,10:46109534-48312291|10:46416327-47756284|10:46943378-47742094|10:46966535-48298893,10:46109534-48312291|10:46416327-47756284|10:46943378-47742094|10:46966535-48298893|10:47531023-47599037|10:47531023-47599037|10:47531764-47597768|10:47537369-47652803|10:47539193-47885867|10:47543323-47703613|10:47545737-47759694|10:47585775-47727500;B_gain_AFmax=0.11,0.9544,0.11,0.11,0.9544,0.11,0.11,0.11,0.11,0.11;B_loss_source=DDD:32922|dgv23e55|nsv516485,DDD:32922|DDD:32937|dgv23e55|nsv516485,DDD:32922|DDD:32937|dgv23e55|nsv516485,DDD:32922|DDD:32937|dgv23e55|nsv516485,DDD:32922|DDD:32937|dgv23e55|nsv516485,DDD:32922|DDD:32937|dgv23e55|esv2663732|nsv516485,DDD:32922|DDD:32937|dgv23e55|esv2663732|nsv516485,DDD:32922|dgv23e55|esv2663732|nsv516485,DDD:32922|dgv23e55|nsv516485,1000g|DDD:32922|dbVar|dgv23e55|esv2421526|esv3623125|gnomAD-SV_v2.1_DEL_10_110010|nsv516485;B_loss_coord=10:46109534-48312291|10:46416327-47756284|10:46943378-47742094,10:46109534-48312291|10:46416327-47756284|10:46931470-47201116|10:46943378-47742094,10:46109534-48312291|10:46416327-47756284|10:46931470-47201116|10:46943378-47742094,10:46109534-48312291|10:46416327-47756284|10:46931470-47201116|10:46943378-47742094,10:46109534-48312291|10:46416327-47756284|10:46931470-47201116|10:46943378-47742094,10:46109534-48312291|10:46416327-47756284|10:46931470-47201116|10:46943378-47742094|10:47150446-47326492,10:46109534-48312291|10:46416327-47756284|10:46931470-47201116|10:46943378-47742094|10:47150446-47326492,10:46109534-48312291|10:46416327-47756284|10:46943378-47742094|10:47150446-47326492,10:46109534-48312291|10:46416327-47756284|10:46943378-47742094,10:46109534-48312291|10:46416327-47756284|10:46943378-47742094|chr10:47531022-47599037|10:47531023-47599037|10:47531023-47599037|10:47537369-47652803|chr10:47582000-47654100|10:47582000-47654100|chr10:47585000-47706000;B_loss_AFmax=0.026,0.026,0.026,0.026,0.026,0.04,0.04,0.04,0.026,0.0318;B_inv_source=IMH;B_inv_coord=10:46257220-51811936;B_inv_AFmax=0.0179;po_B_gain_someG_source=10:46416327-47756284_DDD:32922|10:46931463-47389066_DDD:32936|10:46943378-47136996_dgv22e55|10:46966535-48298893_dgv221e212|10:46976293-47023561_1000g|10:46976293-47023561_dgv116e214|10:47007971-47086710_1000g|10:47007971-47086710_dgv117e214|10:47089973-47150813_1000g|10:47089973-47150813_dgv118e214|10:47321000-47396000_gnomAD-SV_v2.1_DUP_10_29724|10:47383858-47395064_1000g|10:47383858-47395064_dgv119e214|10:47394950-47400600_gnomAD-SV_v2.1_DUP_10_29727|10:47424000-47429050_gnomAD-SV_v2.1_DUP_10_29730|10:47531023-47599037_1000g|10:47531764-47597768_TS40:ISCA-46639|10:47537369-47652803_esv2421526|10:47543323-47703613_dgv85n27|10:47565000-47570000_gnomAD-SV_v2.1_DUP_10_29733...;po_B_gain_someG_coord=10:46109534-48312291_nsv516485|10:46923704-47138897_DDD:32934|10:46931470-47201116_DDD:32937|10:46943378-47742094_dgv24e55|10:46976293-47023561_1000g|10:46976293-47023561_1000g|10:47007971-47086710_1000g|10:47007971-47086710_1000g|10:47089973-47150813_1000g|10:47089973-47150813_1000g|10:47150450-47160300_gnomAD-SV_v2.1_DUP_10_29721|10:47370500-47380000_gnomAD-SV_v2.1_DUP_10_29725|10:47383858-47395064_1000g|10:47389000-47395000_gnomAD-SV_v2.1_DUP_10_29726|10:47412000-47429100_gnomAD-SV_v2.1_DUP_10_29729|10:47530000-47578125_gnomAD-SV_v2.1_DUP_10_29731|10:47531023-47599037_dgv120e214|10:47534700-47555100_gnomAD-SV_v2.1_DUP_10_29732|10:47539193-47885867_DDD:32970|10:47545737-47759694_DDD:32972...;po_B_loss_someG_source=10:46416327-47756284_DDD:32922|10:46943378-47742094_dgv23e55|chr10:47009185-47009299_dbVar|10:47036095-47036306_IMH|chr10:47083158-47083218_dbVar|10:47083161-47083233_gnomAD-SV_v2.1_DEL_10_109994|chr10:47088385-47088703_dbVar|chr10:47120109-47120186_dbVar|chr10:47148773-47150391_dbVar|10:47148774-47150391_esv3623121|10:47172000-47177000_HI40:ISCA-46432|10:47177700-47182800_HI40:ISCA-46433|10:47191200-47201400_HI40:ISCA-46434|10:47211300-47216400_HI40:ISCA-46435|chr10:47241600-47251000_dbVar|10:47252000-47271150_gnomAD-SV_v2.1_DEL_10_110003|10:47275450-47281000_gnomAD-SV_v2.1_DEL_10_110005|10:47301450-47315100_gnomAD-SV_v2.1_DEL_10_110006|chr10:47531022-47599037_dbVar|10:47531023-47599037_esv3623125...;po_B_loss_someG_coord=10:46109534-48312291_nsv516485|10:46931470-47201116_DDD:32937|chr10:47003380-47003486_dbVar|10:47009185-47009299_gnomAD-SV_v2.1_DEL_10_109993|10:47036095-47036306_esv2665191|chr10:47083161-47083233_dbVar|chr10:47088375-47088703_dbVar|10:47088385-47088703_gnomAD-SV_v2.1_DEL_10_109995|chr10:47141536-47141802_dbVar|10:47148774-47150391_1000g|10:47150446-47326492_esv2663732|chr10:47172000-47177000_dbVar|chr10:47177700-47182800_dbVar|chr10:47191200-47201400_dbVar|chr10:47211300-47216400_dbVar|chr10:47252000-47271150_dbVar|chr10:47275450-47281000_dbVar|chr10:47301450-47315100_dbVar|chr10:47383857-47395064_dbVar|10:47531023-47599037_1000g...;GC_content_left=0.415;GC_content_right=0.5;Repeat_coord_left=10:46976181-46976437;Repeat_type_left=LTR78;SegDup_right=10:47590101-47594293|10:47590101-47594293;DDD_HI_percent=89.5,82.54,66.73,.,.,75.66,89.5,.,.,.;ExAC_synZ=-2.98697085794417,-3.10473776124822,-2.98697085794417,.,.,.,.,.,.,.;ExAC_misZ=-2.90416172871297,-3.32991530871711,-2.90416172871297,.,.,.,.,.,.,.;NCBI_gene_ID=.,9721,5540,643650,728643,728113,100132929,653259,439965,100996567;HGNC_gene_ID=.,HGNC:23730,HGNC:9329,HGNC:44989,HGNC:44990,HGNC:23334,HGNC:23584,HGNC:23660,HGNC:34038,HGNC:45004;LOEUF_bin=8,8,8,.,.,9,.,.,.,.;GnomAD_pLI=0.33439,3.8557e-06,8.2144e-07,.,.,0.33439,.,.,.,.;ExAC_pLI=0.00029629,0.00029629,6.116e-09,.,.,.,.,.,.,.;AnnotSV_ranking_score=-1;AnnotSV_ranking_criteria=1A_(cf_Gene_count,_RE_gene,_+0.00)|2D_(cf_B_gain_source,_-1.00)|2B_(cf_po_P_gain_source,_TS,_OMIM_morbid,_+0.00)|2E_(cf_B_gain_source,_+0.00)|2L_(ANTXRLP1,_+0.00)|3A_(9_genes,_+0.00)|4O_(cf_po_B_gain_AllG_source,_B_gain_source,_po_B_gain_SomeG_source,_+0.00)|5F_(+0.00);ACMG_class=1,full=1,full=1,full=1,full=1,full=1,full=1,full=1,full=1,full=1;END=47590995;SVLEN=614838\tGT\t1/.\n11\t66287089\t.\tC\t<DEL>\t.\tPASS\tAnnotSV_ID=11_66287089_66288847_DEL_1;SV_start=66287089;Biologist_annotation=BBS1_internal_frameshift;Biologist_ranking=Pathogenic;Annotation_mode=full,split,split;CytoBand=q13.2;Gene_name=BBS1|ZDHHC24,BBS1,ZDHHC24;Closest_left=DPP3;Closest_right=ACTN3;Gene_count=2;Tx=.,NM_024649,NM_001348571;Tx_version=.,5,2;Tx_start=.,66278105,66288095;Tx_end=.,66301069,66313519;Overlapped_tx_length=.,1759,752;Overlapped_CDS_length=.,238,0;Overlapped_CDS_percent=.,13,0;Frameshift=.,yes,.;Exon_count=.,17,5;Location=.,exon8-intron9,exon5-txEnd;Location2=.,CDS,3'UTR;Dist_nearest_SS=.,0,90;Nearest_SS_type=.,5',3';Intersect_start=.,66287088,66288095;Intersect_end=.,66288847,66288847;RE_gene=BANF1_(morbid/RE=EA_enhancer)|CATSPER1_(morbid/RE=EA_enhancer)|CTSF_(morbid/RE=EA_enhancer)|FIBP_(morbid/RE=EA_enhancer)|KLC2_(morbid/RE=EA_enhancer)|PACS1_(morbid/RE=EA_enhancer)|PC_(morbid/RE=EA_enhancer)|SF3B2_(morbid/RE=EA_enhancer)|SPTBN2_(morbid/RE=EA_enhancer)|TMEM151A_(morbid/RE=EA_enhancer);po_P_gain_source=dbVar:nssv15171978|dbVar:nssv15158476|dbVar:nssv15150306|nssv15150623|dbVar:nssv17976763|dbVar:nssv15150659|dbVar:nssv15605814|dbVar:nssv15146474|dbVar:nssv17973682;po_P_gain_coord=11:70865-134938470|11:198511-134934063|11:230617-134938470|11:32799482-134938470|11:64501920-67129258|11:65138977-67574402|11:65960974-67658241|11:66281868-66288857;po_P_gain_percent=0.00|0.00|0.00|0.00|0.07|0.07|0.10|25.16;po_P_loss_phen=Bardet-Biedl_syndrome_1,_209900_(3)_Digenic_recessive,AR;po_P_loss_source=dbVar:nssv16867095|dbVar:nssv15148225|dbVar:nssv15129970|dbVar:nssv18792809|morbid:BBS1|dbVar:nssv16214536|dbVar:nssv17171795|dbVar:nssv16212285|dbVar:nssv17976607|dbVar:nssv17974991|dbVar:nssv17172605|dbVar:nssv16212781|dbVar:nssv18787680|dbVar:nssv15128612|dbVar:nssv17172606;po_P_loss_coord=11:11835570-118373112|11:65508903-67473140|11:66274841-66292574|11:66274871-66292647|11:66278106-66301069|11:66278112-66291373|11:66278112-66299528|11:66278122-66291682|11:66278712-66293593|11:66283002-66287229|11:66283155-66287229|11:66287079-66288857|11:66287079-66291105|11:66288384-66293649|11:66288722-66293683;po_P_loss_percent=0.00|0.09|9.92|9.89|7.66|13.26|8.21|12.97|11.82|3.33|3.46|98.88|43.68|8.81|2.54;P_snvindel_nb=14,14,7;P_snvindel_phen=BBS1-related_disorder|Bardet-Biedl_syndrome|Bardet-Biedl_syndrome_1|Retinal_dystrophy;B_inv_source=IMH;B_inv_coord=11:1642920-71249653|11:49233128-89368291|11:49425032-89029881|11:49425381-89029675|11:49580506-88798755|11:49652145-88728247|11:50025478-108975588;B_inv_AFmax=0.432;GC_content_left=0.565;GC_content_right=0.545;DDD_HI_percent=67.28,40.7,67.28;ExAC_delZ=-0.648300458519823,-0.648300458519823,-1.23986898178133;ExAC_dupZ=0.663432885116562,0.663432885116562,0.616417349113344;ExAC_cnvZ=0.155145712015149,0.155145712015149,-0.188374414893838;ExAC_synZ=0.635599914039232,0.0819191978639822,0.635599914039232;ExAC_misZ=1.04727080312339,0.0377121632347663,1.04727080312339;GenCC_disease=.,Bardet-Biedl_syndrome|Bardet-Biedl_syndrome_1|ciliopathy,.;GenCC_moi=.,AR,.;GenCC_classification=.,Definitive|Strong|Supportive,.;GenCC_pmid=.,10577921|10577922|12118255|18032602|20301537[PMID]|20498079,.;NCBI_gene_ID=.,582,254359;HGNC_gene_ID=.,HGNC:966,HGNC:27387;OMIM_ID=209901,209901,.;OMIM_phenotype=.,Bardet-Biedl_syndrome_1,_209900_(3)_Digenic_recessive,AR,.;OMIM_inheritance=.,Digenic_recessive,AR,.;OMIM_morbid=yes,yes,.;LOEUF_bin=5,5,7;GnomAD_pLI=0.0004208,3.4063e-12,0.0004208;ExAC_pLI=0.0061403,1.7787e-07,0.0061403;AnnotSV_ranking_score=0.9;AnnotSV_ranking_criteria=1A_(cf_Gene_count,_RE_gene,_+0.00)|2E-1_(BBS1,_+0.90)|3A_(2_genes,_+0.00)|5F_(+0.00);ACMG_class=4,full=4,full=4;END=66288847;SVLEN=-1759\tGT\t1/.\n12\t63935482\t.\tC\t<DEL>\t.\tPASS\tAnnotSV_ID=12_63935482_64130626_DEL_1;SV_start=63935482;Biologist_annotation=DPY19L2_(both_DEL_and_DUP_LCR_mediated,_precise_breakpoints);Biologist_ranking=Pathogenic;Annotation_mode=full,split;CytoBand=q14.2;Gene_name=DPY19L2;Closest_left=AVPR1A;Closest_right=RXYLT1;Gene_count=1;Tx=.,NM_173812;Tx_version=.,5;Tx_start=.,63952692;Tx_end=.,64062273;Overlapped_tx_length=.,109581;Overlapped_CDS_length=.,2277;Overlapped_CDS_percent=.,100;Frameshift=.,no;Exon_count=.,22;Location=.,txStart-txEnd;Location2=.,5'UTR-3'UTR;Intersect_start=.,63952692;Intersect_end=.,64062273;RE_gene=RXYLT1_(morbid/RE=GH_enhancer+GH_promoter)|TBK1_(morbid/RE=EA_enhancer);P_loss_phen=Spermatogenic_failure_9,_613958_(3)_AR;P_loss_source=dbVar:nssv15119764|dbVar:nssv16213932|morbid:DPY19L2,dbVar:nssv16213932|morbid:DPY19L2;P_loss_coord=12:63952693-64062273|12:63952694-64062354|12:63989747-63989817,12:63952693-64062273|12:63989747-63989817;po_P_gain_source=dbVar:nssv15161620|dbVar:nssv15161414|nssv15161422|dbVar:nssv15171852|dbVar:nssv15161798|dbVar:nssv15171855;po_P_gain_coord=12:2-133851895|12:173788-133777902|12:191620-133777645|12:282466-133773393|12:621221-133779118;po_P_gain_percent=0.15|0.15|0.15|0.15|0.15;po_P_loss_source=dbVar:nssv15136921;po_P_loss_coord=12:61300933-66961857;po_P_loss_percent=3.45;P_snvindel_nb=1;P_snvindel_phen=Spermatogenic_failure_9;B_gain_source=.,1000g|DDD:38888|esv3629757|gnomAD-SV_v2.1_DUP_12_34997;B_gain_coord=.,12:63936386-64131550|12:63939159-64117235|12:63939159-64117235|12:63940549-64135811;B_gain_AFmax=.,0.0257;B_loss_source=.,dbVar;B_loss_coord=.,chr12:63923277-64119251|chr12:63939158-64117235|chr12:63946269-64141505;B_loss_AFmax=.,0.01;B_inv_source=IMH;B_inv_coord=12:11501488-96031049|12:40933234-113477160;B_inv_AFmax=0.107;po_B_gain_someG_source=12:63939159-64117235_1000g|12:63940549-64135811_DDD:38888|12:64069043-64136500_dgv280e214|12:63939159-64117235_1000g|12:63940549-64135811_DDD:38888|12:64069043-64136500_dgv280e214;po_B_gain_someG_coord=12:63936386-64131550_gnomAD-SV_v2.1_DUP_12_34997|12:63939159-64117235_esv3629757|12:64020291-64020367_DDD:38896|12:63936386-64131550_gnomAD-SV_v2.1_DUP_12_34997|12:63939159-64117235_esv3629757|12:64020291-64020367_DDD:38896;po_B_loss_someG_source=chr12:63936000-63986000_dbVar|chr12:63946269-64141505_dbVar|chr12:63946732-63946956_dbVar|12:63946733-63946956_IMH|chr12:63959839-63959910_dbVar|12:64020291-64020367_DDD:38896|chr12:64069257-64069348_dbVar|chr12:64076528-64076585_dbVar|chr12:64116494-64116881_dbVar|chr12:63923277-64119251_dbVar|chr12:63939158-64117235_dbVar|12:63946730-63946956_esv2662353|12:63946732-63946956_gnomAD-SV_v2.1_DEL_12_129265|chr12:63950172-63950241_dbVar|chr12:64015848-64018740_dbVar|chr12:64065000-64130000_dbVar|chr12:64069869-64069961_dbVar|chr12:64103835-64106468_dbVar|chr12:64122000-64127000_dbVar;po_B_loss_someG_coord=chr12:63923277-64119251_dbVar|chr12:63939158-64117235_dbVar|12:63946730-63946956_esv2662353|12:63946732-63946956_gnomAD-SV_v2.1_DEL_12_129265|chr12:63950172-63950241_dbVar|chr12:64015848-64018740_dbVar|chr12:64065000-64130000_dbVar|chr12:64069869-64069961_dbVar|chr12:64103835-64106468_dbVar|chr12:64122000-64127000_dbVar|chr12:63936000-63986000_dbVar|chr12:63946269-64141505_dbVar|chr12:63946732-63946956_dbVar|12:63946733-63946956_IMH|chr12:63959839-63959910_dbVar|12:64020291-64020367_DDD:38896|chr12:64069257-64069348_dbVar|chr12:64076528-64076585_dbVar|chr12:64116494-64116881_dbVar;GC_content_left=0.53;GC_content_right=0.43;Repeat_coord_left=12:63935369-63935656;Repeat_type_left=AluSq2;Repeat_coord_right=12:64130409-64130696;Repeat_type_right=AluSq2;SegDup_left=12:63923419-63951619;SegDup_right=12:64119249-64146247;DDD_HI_percent=81.13;ExAC_synZ=1.02618176351368;ExAC_misZ=1.66555804568279;GenCC_disease=.,male_infertility_due_to_globozoospermia|spermatogenic_failure_9;GenCC_moi=.,AR;GenCC_classification=.,Strong|Supportive;GenCC_pmid=.,17008355|21397063|21397063[PMID]_22571172[PMID]|21397064|22627659|22653751|25755131|25780569;NCBI_gene_ID=.,283417;HGNC_gene_ID=.,HGNC:19414;OMIM_ID=613893;OMIM_phenotype=.,Spermatogenic_failure_9,_613958_(3)_AR;OMIM_inheritance=.,AR;OMIM_morbid=yes;LOEUF_bin=4;GnomAD_pLI=1.0936e-13;ExAC_pLI=7.0294e-05;AnnotSV_ranking_score=1;AnnotSV_ranking_criteria=1A_(cf_Gene_count,_RE_gene,_+0.00)|2A_(cf_P_loss_source,_+1.00)|3A_(1_gene,_+0.00)|5F_(+0.00);ACMG_class=5,full=5;END=64130626;SVLEN=-195145\tGT\t1/.\n12\t63935482\t.\tC\t<DUP>\t.\tPASS\tAnnotSV_ID=12_63935482_64130626_DUP_1;SV_start=63935482;Biologist_annotation=DPY19L2_(both_DEL_and_DUP_LCR_mediated,_precise_breakpoints);Biologist_ranking=Pathogenic;Annotation_mode=full,split;CytoBand=q14.2;Gene_name=DPY19L2;Closest_left=AVPR1A;Closest_right=RXYLT1;Gene_count=1;Tx=.,NM_173812;Tx_version=.,5;Tx_start=.,63952692;Tx_end=.,64062273;Overlapped_tx_length=.,109581;Overlapped_CDS_length=.,2277;Overlapped_CDS_percent=.,100;Frameshift=.,no;Exon_count=.,22;Location=.,txStart-txEnd;Location2=.,5'UTR-3'UTR;Intersect_start=.,63952692;Intersect_end=.,64062273;RE_gene=RXYLT1_(morbid/RE=GH_enhancer+GH_promoter)|TBK1_(morbid/RE=EA_enhancer);P_loss_phen=Spermatogenic_failure_9,_613958_(3)_AR;P_loss_source=dbVar:nssv15119764|dbVar:nssv16213932|morbid:DPY19L2,dbVar:nssv16213932|morbid:DPY19L2;P_loss_coord=12:63952693-64062273|12:63952694-64062354|12:63989747-63989817,12:63952693-64062273|12:63989747-63989817;po_P_gain_source=dbVar:nssv15161620|dbVar:nssv15161414|nssv15161422|dbVar:nssv15171852|dbVar:nssv15161798|dbVar:nssv15171855;po_P_gain_coord=12:2-133851895|12:173788-133777902|12:191620-133777645|12:282466-133773393|12:621221-133779118;po_P_gain_percent=0.15|0.15|0.15|0.15|0.15;po_P_loss_source=dbVar:nssv15136921;po_P_loss_coord=12:61300933-66961857;po_P_loss_percent=3.45;P_snvindel_nb=1;P_snvindel_phen=Spermatogenic_failure_9;B_gain_source=.,1000g|DDD:38888|esv3629757|gnomAD-SV_v2.1_DUP_12_34997;B_gain_coord=.,12:63936386-64131550|12:63939159-64117235|12:63939159-64117235|12:63940549-64135811;B_gain_AFmax=.,0.0257;B_loss_source=.,dbVar;B_loss_coord=.,chr12:63923277-64119251|chr12:63939158-64117235|chr12:63946269-64141505;B_loss_AFmax=.,0.01;B_inv_source=IMH;B_inv_coord=12:11501488-96031049|12:40933234-113477160;B_inv_AFmax=0.107;po_B_gain_someG_source=12:63939159-64117235_1000g|12:63940549-64135811_DDD:38888|12:64069043-64136500_dgv280e214|12:63939159-64117235_1000g|12:63940549-64135811_DDD:38888|12:64069043-64136500_dgv280e214;po_B_gain_someG_coord=12:63936386-64131550_gnomAD-SV_v2.1_DUP_12_34997|12:63939159-64117235_esv3629757|12:64020291-64020367_DDD:38896|12:63936386-64131550_gnomAD-SV_v2.1_DUP_12_34997|12:63939159-64117235_esv3629757|12:64020291-64020367_DDD:38896;po_B_loss_someG_source=chr12:63936000-63986000_dbVar|chr12:63946269-64141505_dbVar|chr12:63946732-63946956_dbVar|12:63946733-63946956_IMH|chr12:63959839-63959910_dbVar|12:64020291-64020367_DDD:38896|chr12:64069257-64069348_dbVar|chr12:64076528-64076585_dbVar|chr12:64116494-64116881_dbVar|chr12:63923277-64119251_dbVar|chr12:63939158-64117235_dbVar|12:63946730-63946956_esv2662353|12:63946732-63946956_gnomAD-SV_v2.1_DEL_12_129265|chr12:63950172-63950241_dbVar|chr12:64015848-64018740_dbVar|chr12:64065000-64130000_dbVar|chr12:64069869-64069961_dbVar|chr12:64103835-64106468_dbVar|chr12:64122000-64127000_dbVar;po_B_loss_someG_coord=chr12:63923277-64119251_dbVar|chr12:63939158-64117235_dbVar|12:63946730-63946956_esv2662353|12:63946732-63946956_gnomAD-SV_v2.1_DEL_12_129265|chr12:63950172-63950241_dbVar|chr12:64015848-64018740_dbVar|chr12:64065000-64130000_dbVar|chr12:64069869-64069961_dbVar|chr12:64103835-64106468_dbVar|chr12:64122000-64127000_dbVar|chr12:63936000-63986000_dbVar|chr12:63946269-64141505_dbVar|chr12:63946732-63946956_dbVar|12:63946733-63946956_IMH|chr12:63959839-63959910_dbVar|12:64020291-64020367_DDD:38896|chr12:64069257-64069348_dbVar|chr12:64076528-64076585_dbVar|chr12:64116494-64116881_dbVar;GC_content_left=0.53;GC_content_right=0.43;Repeat_coord_left=12:63935369-63935656;Repeat_type_left=AluSq2;Repeat_coord_right=12:64130409-64130696;Repeat_type_right=AluSq2;SegDup_left=12:63923419-63951619;SegDup_right=12:64119249-64146247;DDD_HI_percent=81.13;ExAC_synZ=1.02618176351368;ExAC_misZ=1.66555804568279;GenCC_disease=.,male_infertility_due_to_globozoospermia|spermatogenic_failure_9;GenCC_moi=.,AR;GenCC_classification=.,Strong|Supportive;GenCC_pmid=.,17008355|21397063|21397063[PMID]_22571172[PMID]|21397064|22627659|22653751|25755131|25780569;NCBI_gene_ID=.,283417;HGNC_gene_ID=.,HGNC:19414;OMIM_ID=613893;OMIM_phenotype=.,Spermatogenic_failure_9,_613958_(3)_AR;OMIM_inheritance=.,AR;OMIM_morbid=yes;LOEUF_bin=4;GnomAD_pLI=1.0936e-13;ExAC_pLI=7.0294e-05;AnnotSV_ranking_score=0;AnnotSV_ranking_criteria=1A_(cf_Gene_count,_RE_gene,_+0.00)|2B_(cf_po_P_gain_source,_TS,_OMIM_morbid,_+0.00)|2G_(cf_po_B_gain_someG_source,_+0.00)|2H-2_(DPY19L2,_+0.00)|3A_(1_gene,_+0.00)|4O_(cf_po_B_gain_AllG_source,_B_gain_source,_po_B_gain_SomeG_source,_+0.00)|5F_(+0.00);ACMG_class=3,full=3;END=64130626;SVLEN=195145\tGT\t1/.\n14\t22323880\t.\tT\t<DEL>\t.\tPASS\tAnnotSV_ID=14_22323880_22952279_DEL_1;SV_start=22323880;Biologist_ranking=Benign;Annotation_mode=full,split;CytoBand=q11.2;Gene_name=TRD-AS1;Closest_left=OR4E1;Closest_right=LINC02332;Gene_count=1;Tx=.,NR_148361;Tx_version=.,1;Tx_start=.,22847807;Tx_end=.,22951948;Overlapped_tx_length=.,104141;Overlapped_CDS_length=.,0;Overlapped_CDS_percent=.,0;Exon_count=.,5;Location=.,txStart-txEnd;Location2=.,UTR;Intersect_start=.,22847807;Intersect_end=.,22951948;RE_gene=CHD8_(HI=3/morbid/RE=GH_enhancer+GH_promoter_enhancer)|MMP14_(morbid/RE=ABC_enhancer+EA_enhancer+GH_enhancer+GH_promoter_enhancer)|PABPN1_(morbid/RE=GH_enhancer+GH_promoter_enhancer)|SLC7A7_(morbid/RE=ABC_enhancer+EA_enhancer+GH_enhancer+GH_promoter_enhancer)|SUPT16H_(morbid/RE=GH_enhancer+GH_promoter_enhancer);po_P_gain_source=dbVar:nssv15162475|dbVar:nssv15606090|dbVar:nssv15161908|dbVar:nssv15162476|dbVar:nssv15161629|dbVar:nssv15139565|dbVar:nssv15141262|dbVar:nssv15146564|dbVar:nssv15146758|dbVar:nssv16207193|dbVar:nssv17976958|dbVar:nssv15148269|dbVar:nssv15161107|nssv15161424|dbVar:nssv15161067|dbVar:nssv15132618|dbVar:nssv15134537|dbVar:nssv17955846|dbVar:nssv16091748;po_P_gain_coord=14:19000423-107289053|14:19100683-28730087|14:19280734-107287663|14:19327824-107287663|14:19794562-107234280|14:19794562-27768254|14:19794562-34049214|14:20468771-39453619|14:20490853-44562875|14:20511673-44829030|14:20511673-47481203|14:20511673-49111245|14:20511674-107285437|14:20619309-107263478|14:20619309-23911404|14:20880747-25487326|14:20925966-23649548|14:21717094-24027220;po_P_gain_percent=0.71|6.53|0.71|0.71|0.72|7.88|4.41|3.31|2.61|2.58|2.33|2.20|0.72|0.73|19.09|13.64|23.07|27.20;po_P_loss_source=dbVar:nssv15119819|dbVar:nssv15145699|dbVar:nssv18330314|dbVar:nssv16208379|dbVar:nssv17976070;po_P_loss_coord=14:20223409-23210490|14:20665105-45754005|14:20690197-23114522|14:21143934-23297667|14:21162264-50713602;po_P_loss_percent=21.04|2.50|25.92|29.18|2.13;B_gain_source=TS40:ISCA-37476,TS40:ISCA-37476|dgv594e212|dgv598e212;B_gain_coord=14:22111110-23021097,14:22111110-23021097|14:22420175-22995788|14:22558879-22977816;B_gain_AFmax=.,0.02;B_loss_source=HI40:ISCA-37476,DDD:42190|HI40:ISCA-37476|dgv599e212;B_loss_coord=14:22111110-23021097,14:22111110-23021097|14:22549070-22959340|14:22558879-22995788;B_loss_AFmax=.,0.0107;po_B_gain_someG_source=14:22420175-22995788_dgv594e212|14:22824113-22824253_IMH;po_B_gain_someG_coord=14:22111110-23021097_TS40:ISCA-37476|14:22558879-22977816_dgv598e212;po_B_loss_someG_source=chr14:22203999-22380000_dbVar|chr14:22377253-22379001_dbVar|chr14:22386251-22387140_dbVar|chr14:22401118-22401214_dbVar|chr14:22451362-22451480_dbVar|14:22506096-22519924_dgv596e212|chr14:22522033-22522131_dbVar|chr14:22557093-22558668_dbVar|chr14:22566919-22569163_dbVar|chr14:22578988-22580660_dbVar|chr14:22582707-22583756_dbVar|14:22582708-22583756_DDD:42194|14:22582708-22583756_esv2663069|chr14:22592792-22593350_dbVar|chr14:22621082-22623586_dbVar|chr14:22650745-22651552_dbVar|chr14:22690248-22693574_dbVar|14:22740309-22923239_esv3633740|chr14:22753195-22755692_dbVar|chr14:22763326-22765409_dbVar...;po_B_loss_someG_coord=14:22111110-23021097_HI40:ISCA-37476|chr14:22375089-22375885_dbVar|chr14:22381501-22381559_dbVar|chr14:22392130-22392542_dbVar|chr14:22414330-22458520_dbVar|chr14:22501037-22503623_dbVar|chr14:22520154-22520348_dbVar|14:22549070-22959340_DDD:42190|14:22558879-22995788_dgv599e212|chr14:22570896-22575554_dbVar|chr14:22582165-22583029_dbVar|14:22582707-22583756_gnomAD-SV_v2.1_DEL_14_140471|14:22582708-22583756_IMH|14:22582714-22583762_esv3633739|chr14:22602805-22607184_dbVar|chr14:22629626-22629708_dbVar|chr14:22667031-22667110_dbVar|chr14:22731881-22732433_dbVar|chr14:22740393-22749648_dbVar|chr14:22760947-22761344_dbVar...;GC_content_left=0.25;GC_content_right=0.39;NCBI_gene_ID=.,105370401;HGNC_gene_ID=.,HGNC:56197;AnnotSV_ranking_score=-1;AnnotSV_ranking_criteria=1A_(cf_Gene_count,_RE_gene,_+0.00)|2F/4O_(cf_B_loss_source,_-1.00)|2B_(cf_po_P_loss_source,_HI,_OMIM_morbid,_+0.00|3A_(1_gene,_+0.00)|5F_(+0.00);ACMG_class=1,full=1;END=22952279;SVLEN=-628400\tGT\t1/.\n14\t74001652\t.\tC\t<DEL>\t.\tPASS\tAnnotSV_ID=14_74001652_74022324_DEL_1;SV_start=74001652;Biologist_ranking=Benign;Annotation_mode=full,split,split;CytoBand=q24.3;Gene_name=HEATR4|ACOT1,HEATR4,ACOT1;Closest_left=RIOX1;Closest_right=ACOT2;Gene_count=2;Tx=.,NM_001220484,NM_001037161;Tx_version=.,1,2;Tx_start=.,73945188,74003846;Tx_end=.,74025651,74010500;Overlapped_tx_length=.,20673,6654;Overlapped_CDS_length=.,0,1266;Overlapped_CDS_percent=.,0,100;Frameshift=.,.,no;Exon_count=.,18,3;Location=.,intron1-intron1,txStart-txEnd;Location2=.,5'UTR,5'UTR-3'UTR;Dist_nearest_SS=.,3130,.;Nearest_SS_type=.,5',.;Intersect_start=.,74001651,74003846;Intersect_end=.,74022324,74010500;RE_gene=COQ6_(morbid/RE=EA_enhancer)|ISCA2_(morbid/RE=GH_enhancer)|PSEN1_(morbid/RE=EA_enhancer);po_P_gain_source=dbVar:nssv15162475|dbVar:nssv15161908|dbVar:nssv15162476|dbVar:nssv15161629|dbVar:nssv15161107|nssv15161424|dbVar:nssv15161067|dbVar:nssv17976728|dbVar:nssv17517489|dbVar:nssv15161689;po_P_gain_coord=14:19000423-107289053|14:19280734-107287663|14:19327824-107287663|14:19794562-107234280|14:20511674-107285437|14:20619309-107263478|14:37671059-106985955|14:54654002-75828024|14:73750742-107285437;po_P_gain_percent=0.02|0.02|0.02|0.02|0.02|0.02|0.03|0.10|0.06;po_P_loss_source=dbVar:nssv15161064|dbVar:nssv8639619|dbVar:nssv15161370;po_P_loss_coord=14:70028817-82441728|14:73152116-77698582|14:73809922-79301402;po_P_loss_percent=0.17|0.45|0.38;B_gain_source=DDD:43163|dgv655e212|dgv657e212;B_gain_coord=14:73995762-74031034|14:73998504-74050492|14:74001111-74024031;B_gain_AFmax=0.1799;B_loss_source=1000g|DDD:43161|DDD:43163|dbVar|dgv401e199|dgv654e212|esv2421969|esv3634909,1000g|DDD:43161|DDD:43163|dbVar|dgv401e199|dgv654e212|esv2421969|esv3634909,1000g|DDD:43161|DDD:43163|DDD:43165|dbVar|dgv401e199|dgv654e212|esv2421969|esv3634909;B_loss_coord=14:73995762-74031034|14:73996446-74025592|14:73997052-74024450|chr14:73997195-74024603|14:73997196-74024603|14:73997196-74024603|14:73998504-74050492|14:73998977-74028117,14:73995762-74031034|14:73996446-74025592|14:73997052-74024450|chr14:73997195-74024603|14:73997196-74024603|14:73997196-74024603|14:73998504-74050492|14:73998977-74028117,14:73995762-74031034|14:73996446-74025592|14:73997052-74024450|chr14:73997195-74024603|14:73997196-74024603|14:73997196-74024603|14:73998504-74050492|14:73998977-74028117|14:74001124-74020979;B_loss_AFmax=0.8135;B_inv_source=IMH;B_inv_coord=14:34547844-76392174;B_inv_AFmax=0.0264;po_B_gain_someG_source=14:73998504-74050492_DDD:43163|14:74001655-74002844_DDD:43168|14:74007603-74039880_IMH|14:74007864-74040335_IMH|14:74008288-74008463_nsv514748|14:74011084-74024007_1000g|14:74011084-74024007_dgv407e214|;po_B_gain_someG_coord=14:73995762-74031034_dgv655e212|14:74001111-74024031_dgv657e212|14:74001655-74004589_DDD:43169|14:74007816-74040003_IMH|14:74007919-74039902_gnomAD-SV_v2.1_DUP_14_38740|14:74010621-74023183_DDD:43174|14:74011084-74024007_1000g|14:74020544-74030798_DDD:43176;po_B_loss_someG_source=14:73996446-74025592_dgv401e199|chr14:73997195-74024603_dbVar|14:73997196-74024603_esv3634909|14:73998977-74028117_esv2421969|14:74002704-74003063_nsv514747|14:74006839-74031034_dgv661e212|14:74010064-74012567_nsv514749|14:74011084-74024007_1000g|chr14:74019700-74051250_dbVar|;po_B_loss_someG_coord=14:73995762-74031034_dgv654e212|14:73997052-74024450_DDD:43161|14:73997196-74024603_1000g|14:73998504-74050492_DDD:43163|14:74001124-74020979_DDD:43165|14:74006839-74024031_dgv660e212|14:74006971-74038879_esv2672436|chr14:74011083-74024007_dbVar|14:74011084-74024007_esv3634910|14:74022142-74045835_DDD:43178;GC_content_left=0.42;GC_content_right=0.38;Repeat_coord_left=14:74001513-74001649|14:74001714-74002042;Repeat_type_left=FLAM_A|L1ME4a;Repeat_coord_right=14:74021756-74022225;Repeat_type_right=L1M1;SegDup_left=14:74000099-74020296;DDD_HI_percent=85.75,85.75,79.11;ExAC_synZ=2.96959666946894,-0.328810289068687,2.96959666946894;ExAC_misZ=4.05533207481267,-0.503765753071617,4.05533207481267;NCBI_gene_ID=.,399671,641371;HGNC_gene_ID=.,HGNC:16761,HGNC:33128;LOEUF_bin=6,6,8;GnomAD_pLI=6.4141e-05,1.3711e-29,6.4141e-05;ExAC_pLI=0.035999,6.2323e-17,0.035999;AnnotSV_ranking_score=-1;AnnotSV_ranking_criteria=1A_(cf_Gene_count,_RE_gene,_+0.00)|2F/4O_(cf_B_loss_source,_-1.00)|2B_(cf_po_P_loss_source,_HI,_OMIM_morbid,_+0.00|3A_(2_genes,_+0.00)|5F_(+0.00);ACMG_class=1,full=1,full=1;END=74022324;SVLEN=-20673\tGT\t1/.\n14\t107152093\t.\tC\t<DEL>\t.\tPASS\tAnnotSV_ID=14_107152093_107180095_DEL_1;SV_start=107152093;Biologist_ranking=Benign;Annotation_mode=full;CytoBand=q32.33;Closest_left=LINC00221;Closest_right=MIR5195;Gene_count=0;po_P_gain_source=dbVar:nssv15162475|dbVar:nssv15161908|dbVar:nssv15162476|dbVar:nssv15161629|dbVar:nssv15161107|nssv15161424|dbVar:nssv15161067|dbVar:nssv15161689|dbVar:nssv15161760|dbVar:nssv15161081|dbVar:nssv18330720|dbVar:nssv15161039|dbVar:nssv15161040|dbVar:nssv15777241|dbVar:nssv15125898|dbVar:nssv15161535|dbVar:nssv15777234|dbVar:nssv15161537|dbVar:nssv15606082|dbVar:nssv15161360|dbVar:nssv15135151;po_P_gain_coord=14:19000423-107289053|14:19280734-107287663|14:19327824-107287663|14:19794562-107234280|14:20511674-107285437|14:20619309-107263478|14:73750742-107285437|14:74122476-107287505|14:77689139-107287505|14:84537503-107285437|14:86560375-107240869|14:91922206-107240869|14:91969029-107285437|14:93331785-107289540|14:98104858-107263478|14:99794231-107285437|14:99914350-107258824|14:100575918-107281934|14:103788752-107263478|14:106252706-107263478;po_P_gain_percent=0.03|0.03|0.03|0.03|0.03|0.03|0.08|0.08|0.09|0.12|0.14|0.18|0.18|0.20|0.31|0.37|0.38|0.42|0.81|2.77;po_P_loss_source=dbVar:nssv15161324|dbVar:nssv16215328|dbVar:nssv15161030|dbVar:nssv15161062|dbVar:nssv15142554|dbVar:nssv15161267|dbVar:nssv15161579|dbVar:nssv15161268|dbVar:nssv17968992|dbVar:nssv15161102|dbVar:nssv15161557|dbVar:nssv16255573|dbVar:nssv15142555|dbVar:nssv15161354|dbVar:nssv18841864|dbVar:nssv15777252|dbVar:nssv15161369|dbVar:nssv15141232|nssv16208943|dbVar:nssv18830964|dbVar:nssv15150359|dbVar:nssv15161271|dbVar:nssv15161574|dbVar:nssv15161803|dbVar:nssv16208399|dbVar:nssv15142293|dbVar:nssv16208400|dbVar:nssv15120383|dbVar:nssv15137946;po_P_loss_coord=14:95990745-107287708|14:96829291-107287663|14:98404975-107263478|14:100297993-107263478|14:100661320-107285437|14:100775720-107263478|14:101048397-107285437|14:101274638-107263478|14:101732159-107285437|14:102131940-107263478|14:102392008-107284531|14:102615954-107285437|14:102670707-107285437|14:102705760-107285437|14:102729778-107283138|14:102931120-107285437|14:103071434-107287505|14:103153638-107285437|14:103636648-107285437|14:103965060-107285437|14:104251096-107278770|14:104289938-107287505|14:104517596-107285437|14:104764079-107285437|14:104915609-107285437|14:105303585-107285437|14:105489734-107258965|14:106252706-107287505;po_P_loss_percent=0.25|0.27|0.32|0.40|0.42|0.43|0.45|0.47|0.50|0.55|0.57|0.60|0.61|0.61|0.61|0.64|0.66|0.68|0.77|0.84|0.92|0.93|1.01|1.11|1.18|1.41|1.58|2.71;B_gain_source=DDD:43963|TS40:ISCA-37477|esv2760346;B_gain_coord=14:106050001-107289540|14:106437088-107285437|14:107136632-107191499;B_gain_AFmax=0.0828;B_loss_source=DDD:43904|DDD:43963|HI40:ISCA-37477|esv2760346;B_loss_coord=14:106050001-107289540|14:106437088-107285437|14:106700994-107266403|14:107136632-107191499;B_loss_AFmax=0.2438;po_B_gain_someG_source=14:106437088-107285437_esv2760346|14:107136632-107191499_DDD:43963|14:107147167-107164532_TS40:ISCA-46684|;po_B_gain_someG_coord=14:106050001-107289540_TS40:ISCA-37477|14:106874357-107164992_IMH|14:107145552-107179808_dgv699e212|14:107147167-107164532_dgv428e214;po_B_loss_someG_source=14:106437088-107285437_esv2760346|14:107054315-107166266_DDD:43951|chr14:107138985-107155491_dbVar|14:107172849-107183396_HI40:ISCA-46673|14:107174372-107174933_IMH|14:107174399-107174927_DDD:43974|;po_B_loss_someG_coord=14:106050001-107289540_HI40:ISCA-37477|14:106700994-107266403_DDD:43904|14:107136632-107191499_DDD:43963|chr14:107171543-107171645_dbVar|14:107172849-107183396_esv3635707|14:107174391-107174931_esv3635708|14:107174399-107174927_esv2665347;GC_content_left=0.355;GC_content_right=0.425;ENCODE_blacklist_left=14:107151001-107176900;ENCODE_blacklist_characteristics_left=High_Signal_Region;AnnotSV_ranking_score=-1.6;AnnotSV_ranking_criteria=1B_(cf_Gene_count,_RE_gene,_-0.60)|2F/4O_(cf_B_loss_source,_-1.00)|2B_(cf_po_P_loss_source,_HI,_OMIM_morbid,_+0.00|3A_(0_gene,_+0.00)|5F_(+0.00);ACMG_class=1;END=107180095;SVLEN=-28003\tGT\t1/.\n15\t20432852\t.\tG\t<DUP>\t.\tPASS\tAnnotSV_ID=15_20432852_22765687_DUP_1;SV_start=20432852;Biologist_ranking=Benign;Annotation_mode=full,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split;CytoBand=q11.1-q11.2,q11.1,q11.1-q11.2,q11.2,q11.2,q11.2,q11.2,q11.2,q11.2,q11.2,q11.2,q11.2,q11.2,q11.2,q11.2,q11.2,q11.2,q11.2,q11.2,q11.2,q11.2,q11.2,q11.2,q11.2,q11.2,q11.2,q11.2;Gene_name=CHEK2P2|HERC2P3|GOLGA6L6|GOLGA8CP|NBEAP1|MIR3118-2|POTEB2|MIR5701-1|LINC01193|FAM30C|LOC646214|CXADRP2|POTEB|NF1P2|LINC02203|OR4M2-OT1|OR4M2|OR4N4|OR4N3P|IGHV1OR15-1|IGHV1OR15-3|MIR1268A|REREP3|MIR4509-1|GOLGA8DP|GOLGA6L1,CHEK2P2,HERC2P3,GOLGA6L6,GOLGA8CP,NBEAP1,MIR3118-2,POTEB2,MIR5701-1,LINC01193,FAM30C,LOC646214,CXADRP2,POTEB,NF1P2,LINC02203,OR4M2-OT1,OR4M2,OR4N4,OR4N3P,IGHV1OR15-1,IGHV1OR15-3,MIR1268A,REREP3,MIR4509-1,GOLGA8DP,GOLGA6L1;Closest_right=TUBGCP5;Gene_count=26;Tx=.,NR_038836,NR_036432,NM_001145004,NR_027411,NR_027992,NR_036062,NM_001277303,NR_049886,NR_040094,NR_145444,NR_027053,NR_024387,NM_001277304,NR_028506,NR_152818,NR_110480,NM_001004719,NM_001005241,NR_028067,NR_135694,NR_135666,NR_031672,NR_033735,NR_039732,NR_027407,NM_001001413;Tx_version=.,1,1,2,2,1,2,1,1,1,1,2,1,2,2,1,1,2,4,1,1,1,1,1,1,1,3;Tx_start=.,20487996,20613648,20737093,20767673,20874796,21038123,21040700,21145580,21145766,21208605,21932513,22014402,22051852,22133180,22195582,22278030,22368477,22382472,22413461,22448239,22465805,22513228,22546564,22675147,22702284,22736245;Tx_end=.,20496811,20711433,20747114,20781026,20961480,21038198,21071643,21145662,21198633,21255165,21940739,22016878,22083259,22145802,22199978,22383564,22369561,22383813,22414398,22448881,22466547,22513280,22570831,22675241,22715728,22746002;Overlapped_tx_length=.,8815,97785,10021,13353,86684,75,30943,82,52867,46560,8226,2476,31407,12622,4396,105534,1084,1341,937,642,742,52,24267,94,13444,9757;Overlapped_CDS_length=.,0,0,2175,0,0,0,1635,0,0,0,0,0,1635,0,0,0,942,951,0,0,0,0,0,0,0,2007;Overlapped_CDS_percent=.,0,0,100,0,0,0,100,0,0,0,0,0,100,0,0,0,95,100,0,0,0,0,0,0,0,100;Frameshift=.,.,.,no,.,.,.,no,.,.,.,.,.,no,.,.,.,no,no,.,.,.,.,.,.,.,no;Exon_count=.,6,26,11,18,3,1,11,1,5,4,1,1,11,8,3,9,1,1,1,2,2,1,3,1,18,9;Location=.,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd;Location2=.,UTR,UTR,5'UTR-3'UTR,UTR,UTR,UTR,5'UTR-3'UTR,UTR,UTR,UTR,UTR,UTR,5'UTR-3'UTR,UTR,UTR,UTR,5'UTR-3'UTR,5'UTR-3'UTR,UTR,UTR,UTR,UTR,UTR,UTR,UTR,5'UTR-3'UTR;Intersect_start=.,20487996,20613648,20737093,20767673,20874796,21038123,21040700,21145580,21145766,21208605,21932513,22014402,22051852,22133180,22195582,22278030,22368477,22382472,22413461,22448239,22465805,22513228,22546564,22675147,22702284,22736245;Intersect_end=.,20496811,20711433,20747114,20781026,20961480,21038198,21071643,21145662,21198633,21255165,21940739,22016878,22083259,22145802,22199978,22383564,22369561,22383813,22414398,22448881,22466547,22513280,22570831,22675241,22715728,22746002;RE_gene=ADAM22_(morbid/RE=mTL_miRNA)|AGO2_(morbid/RE=mTL_miRNA)|AIP_(morbid/RE=mTL_miRNA)|BLOC1S3_(morbid/RE=mTL_miRNA)|CA12_(morbid/RE=mTL_miRNA)|CACNA1H_(morbid/RE=mTL_miRNA)|CAMK2G_(morbid/RE=mTL_miRNA)|CDKN1B_(HI=3/morbid/RE=mTL_miRNA)|CERS1_(morbid/RE=mTL_miRNA)|DHCR7_(morbid/RE=mTL_miRNA)|DICER1_(HI=3/morbid/RE=mTL_miRNA)|EDAR_(morbid/RE=mTL_miRNA)|EGLN1_(morbid/RE=mTL_miRNA)|EPB41_(morbid/RE=mTL_miRNA)|EPHA2_(morbid/RE=mTL_miRNA)|ERBB3_(morbid/RE=mTL_miRNA)|FRMPD4_(morbid/RE=mTL_miRNA)|GABRB2_(morbid/RE=mTL_miRNA)|GATA6_(HI=3/morbid/RE=mTL_miRNA)|GCK_(morbid/RE=mTL_miRNA)|HPRT1_(HI=3/morbid/RE=mTL_miRNA)|HRAS_(morbid/RE=mTL_miRNA)|HSPD1_(morbid/RE=mTL_miRNA)|IL6ST_(morbid/RE=mTL_miRNA)|INF2_(morbid/RE=mTL_miRNA)|ISCU_(morbid/RE=mTL_miRNA)|KAT6B_(HI=3/morbid/RE=mTL_miRNA)|KCNJ10_(morbid/RE=mTL_miRNA)|KIF23_(morbid/RE=mTL_miRNA)|KLHL3_(morbid/RE=mTL_miRNA)|KMT2D_(HI=3/morbid/RE=mTL_miRNA)|LRIG2_(morbid/RE=mTL_miRNA)|MAGEL2_(morbid/RE=ABC_enhancer)|MAPK1_(morbid/RE=mTL_miRNA)|MAPKAPK5_(morbid/RE=mTL_miRNA)|MKRN3_(morbid/RE=ABC_enhancer)|NDUFS1_(morbid/RE=mTL_miRNA)|NEK9_(morbid/RE=mTL_miRNA)|NIPA1_(morbid/RE=ABC_enhancer)|NPM1_(morbid/RE=mTL_miRNA)|ORAI1_(morbid/RE=mTL_miRNA)|PEX26_(morbid/RE=mTL_miRNA)|PHF12_(HI=3/RE=mTL_miRNA)|PIGP_(morbid/RE=mTL_miRNA)|POT1_(morbid/RE=mTL_miRNA)|PRKCA_(morbid/RE=mTL_miRNA)|PRLR_(morbid/RE=mTL_miRNA)|PURA_(HI=3/morbid/RE=mTL_miRNA)|RAC3_(morbid/RE=mTL_miRNA)|SCN1A_(HI=3/morbid/RE=mTL_miRNA)...;po_P_gain_source=dbVar:nssv15172447|dbVar:nssv15149081|dbVar:nssv15148902|dbVar:nssv15125410|dbVar:nssv15127689|dbVar:nssv15127462|dbVar:nssv15126524|dbVar:nssv15124656|dbVar:nssv15127659|dbVar:nssv15126021|dbVar:nssv15172190|dbVar:nssv15150569|dbVar:nssv15147052|dbVar:nssv15145742|dbVar:nssv15147053|dbVar:nssv15175556|dbVar:nssv15145744|dbVar:nssv15774514|dbVar:nssv15148785|dbVar:nssv15605894|dbVar:nssv15149135|dbVar:nssv15148575|dbVar:nssv15147687|dbVar:nssv15605895|dbVar:nssv15147058|dbVar:nssv15145747|dbVar:nssv15146452|dbVar:nssv15149084|dbVar:nssv15147355|dbVar:nssv15149616|dbVar:nssv15147801|dbVar:nssv15146958|dbVar:nssv15149124|dbVar:nssv15123304|dbVar:nssv15147513|dbVar:nssv15127079|dbVar:nssv15605897|dbVar:nssv15605899|dbVar:nssv15125414|dbVar:nssv15148135|dbVar:nssv15146406|dbVar:nssv15148053|dbVar:nssv15145661|nssv15146195|dbVar:nssv15145807|dbVar:nssv15147309|dbVar:nssv15145805|nssv15146672|dbVar:nssv15145677|dbVar:nssv18841879|dbVar:nssv16207640|dbVar:nssv16215281|dbVar:nssv15755702|dbVar:nssv15145809|nssv15150756|dbVar:nssv15145849|dbVar:nssv15146718|dbVar:nssv15148834|dbVar:nssv15147450|nssv15148847|dbVar:nssv15146035|dbVar:nssv15148907|dbVar:nssv15146735|dbVar:nssv15148824|dbVar:nssv15146042|dbVar:nssv15147411|dbVar:nssv15147985|dbVar:nssv15148007|dbVar:nssv15146680|dbVar:nssv15147424|dbVar:nssv15148131|dbVar:nssv15145909;po_P_gain_coord=15:20016812-102493540|15:20044343-28924405|15:20045835-32914140|15:20063341-102521392|15:20063341-29093456|15:20063341-29209620|15:20063341-30448351|15:20063341-32439302|15:20063341-32942613|15:20063341-32986584|15:20071674-102461162|15:20071674-30737344|15:20085003-28947309|15:20085003-29210720|15:20085004-28178425|15:20102541-29031690|15:20110723-28408897|15:20179528-32998070|15:20190549-28406650|15:20190549-30300265|15:20190549-32386089|15:20190549-32917801|15:20190549-32917857|15:20191653-28525310|15:20207714-30641396|15:20207714-32413623|15:20251769-28631040|15:20306550-26208861|15:20686197-30509384|15:20733396-102511616|15:20733396-28406650|15:20733396-28406709|15:20848461-27662530|15:21129985-28535266|15:22304597-28577787|15:22318645-29209620|15:22382861-32396457|15:22383300-32917689|15:22409402-28952953|15:22652061-28883749|15:22669053-28435888|15:22698523-28940098|15:22698523-29030517|15:22698523-29085896|15:22698523-30366124|15:22698523-30653936|15:22698523-32899558|15:22742397-28567325|15:22750306-23114374|15:22750306-23164315|15:22750306-23226254|15:22765629-28520313|15:22765629-28557186|15:22765629-28559402|15:22765629-28912057|15:22765629-29006852|15:22765629-29085896|15:22765629-29096442|15:22765629-30366124|15:22765629-30653936|15:22765629-30819509|15:22765629-38837526|15:22765638-28520316|15:22765638-29085888|15:22765638-30366079|15:22765638-31467435|15:22765638-32509932|15:22765638-32899558;po_P_gain_percent=2.83|26.27|18.13|2.83|25.83|25.51|22.46|18.85|18.11|18.05|2.83|21.87|26.32|25.56|28.82|26.13|28.11|18.20|28.39|23.08|19.13|18.33|18.33|27.99|22.36|19.11|27.84|39.52|21.17|2.49|26.49|26.49|28.14|22.09|7.35|6.49|3.82|3.63|5.44|1.82|1.68|1.08|1.06|1.05|0.88|0.84|0.66|0.40|4.23|3.72|3.23|0.00|0.00|0.00|0.00|0.00|0.00|0.00|0.00|0.00|0.00|0.00|0.00|0.00|0.00|0.00|0.00|0.00;po_P_loss_source=dbVar:nssv16865885|dbVar:nssv18326337|dbVar:nssv15605896|dbVar:nssv15123310|dbVar:nssv18841918|dbVar:nssv16208656|dbVar:nssv18792791|dbVar:nssv16215320|dbVar:nssv15147060|dbVar:nssv15146946|dbVar:nssv15147062|dbVar:nssv15153078|dbVar:nssv18792767|dbVar:nssv15160814|dbVar:nssv15160813|dbVar:nssv15159751|dbVar:nssv15160812|dbVar:nssv16216734|dbVar:nssv16297059|dbVar:nssv15147987|dbVar:nssv16215225|dbVar:nssv16208660|dbVar:nssv15160288|dbVar:nssv15146407|dbVar:nssv15145750|dbVar:nssv16297060|dbVar:nssv15149692|dbVar:nssv15147712|dbVar:nssv15145753|dbVar:nssv15147316|dbVar:nssv15145752|nssv15148282|dbVar:nssv15146196|nssv15146797|dbVar:nssv15146673|dbVar:nssv15147319|dbVar:nssv18326338|dbVar:nssv17955873|dbVar:nssv18842037|dbVar:nssv15145025|dbVar:nssv15145441|dbVar:nssv15145201|dbVar:nssv17517455|dbVar:nssv16297061|dbVar:nssv16208668|dbVar:nssv15129123|dbVar:nssv16215325|dbVar:nssv15130100|dbVar:nssv16209033|dbVar:nssv15172201|dbVar:nssv15606130|dbVar:nssv15132915|nssv16736610|dbVar:nssv16736624|nssv16736646|dbVar:nssv16091751|dbVar:nssv15130140|dbVar:nssv15146040|dbVar:nssv15148147|dbVar:nssv15146043|dbVar:nssv15145953|dbVar:nssv15148915|dbVar:nssv15148857|dbVar:nssv15146645;po_P_loss_coord=15:20612841-23272733|15:20739498-28566579|15:20848751-32925141|15:21129985-32514926|15:21172301-26208861|15:21903816-23272733|15:22070541-23262343|15:22299435-23226254|15:22318598-28940098|15:22427967-23226254|15:22432629-30641396|15:22503622-23091180|15:22646195-23174919|15:22646195-23191269|15:22646195-23199953|15:22646195-23302626|15:22646195-23428906|15:22646693-28964445|15:22646800-23301267|15:22652048-28705151|15:22652331-23226254|15:22652331-23272733|15:22652331-29050198|15:22669053-28435888|15:22669053-30401486|15:22695843-23300942|15:22698523-28406650|15:22698523-28406709|15:22698523-28520313|15:22698523-28557186|15:22698523-28691460|15:22698523-29030517|15:22698523-29085896|15:22698523-38381783|15:22736247-23265381|15:22743128-23246000|15:22744150-23246340|15:22746945-23102836|15:22746945-23121448|15:22746945-23199421|15:22746949-23323445|15:22749636-23301317|15:22750306-23109890|15:22750306-23164315|15:22750306-23222284|15:22750306-23226254|15:22750306-23272733|15:22750306-28535266|15:22751195-23251194|15:22765629-23085096|15:22765629-23191062|15:22765629-23217514|15:22765629-23300287|15:22765629-28559402|15:22765629-28691460|15:22765629-28912057|15:22765629-28940098|15:22765629-28976193|15:22765629-32676855|15:22765638-29085888;po_P_loss_percent=80.94|25.89|15.87|14.37|31.64|62.96|58.33|50.31|6.75|42.31|4.06|44.60|22.60|21.92|21.58|18.20|15.27|1.88|18.17|1.88|19.75|18.27|1.77|1.68|1.25|11.54|1.18|1.18|1.15|1.15|1.12|1.06|1.05|0.43|5.56|4.49|4.29|5.27|5.00|4.14|3.25|2.91|4.28|3.72|3.26|3.23|2.94|0.27|2.90|0.02|0.01|0.01|0.01|0.00|0.00|0.00|0.00|0.00|0.00|0.00;B_gain_source=dgv40e203|dgv93e55,DDD:43986|DDD:43992|DDD:44001|TS40:ISCA-46686|dgv2191n100|dgv40e203|dgv91e55|dgv92e55|dgv93e55,DDD:43986|DDD:43992|DDD:44001|TS40:ISCA-46686|dgv2191n100|dgv40e203|dgv91e55|dgv92e55|dgv93e55,DDD:43986|DDD:43992|DDD:44001|TS40:ISCA-46686|dgv2191n100|dgv40e203|dgv91e55|dgv92e55|dgv93e55,DDD:43986|DDD:43992|DDD:44001|TS40:ISCA-46686|dgv2191n100|dgv40e203|dgv91e55|dgv92e55|dgv93e55|esv3892595,DDD:43986|DDD:43992|DDD:44001|TS40:ISCA-46686|dgv2191n100|dgv40e203|dgv91e55|dgv92e55|dgv93e55|esv3892595,DDD:43986|DDD:43992|DDD:44001|TS40:ISCA-46686|dgv2191n100|dgv40e203|dgv91e55|dgv92e55|dgv93e55|esv3892595,DDD:43986|DDD:43992|DDD:44001|TS40:ISCA-46686|dgv2191n100|dgv40e203|dgv91e55|dgv92e55|dgv93e55|esv3892595|nsv514765,DDD:43986|DDD:43992|DDD:44001|DDD:44068|TS40:ISCA-46686|TS40:ISCA-46688|dgv2191n100|dgv40e203|dgv91e55|dgv92e55|dgv93e55|esv3892595,DDD:43986|DDD:43992|DDD:44001|DDD:44068|TS40:ISCA-46686|dgv2191n100|dgv40e203|dgv91e55|dgv92e55|dgv93e55|esv3892595,DDD:43992|DDD:44001|DDD:44068|TS40:ISCA-46686|dgv2191n100|dgv40e203|dgv92e55|dgv93e55|esv3892595,DDD:44001|DDD:44096|DDD:44097|DDD:44098|TS40:ISCA-46686|dgv2191n100|dgv40e203|dgv92e55|dgv93e55,DDD:44001|DDD:44096|DDD:44098|TS40:ISCA-46686|dgv2191n100|dgv40e203|dgv92e55|dgv93e55,DDD:44001|DDD:44096|DDD:44098|TS40:ISCA-46686|dgv2191n100|dgv40e203|dgv92e55|dgv93e55,DDD:44001|DDD:44096|TS40:ISCA-46686|dgv2191n100|dgv40e203|dgv92e55|dgv93e55,DDD:44001|DDD:44096|TS40:ISCA-46686|dgv2191n100|dgv40e203|dgv92e55|dgv93e55,DDD:44001|DDD:44096|dgv2191n100|dgv3e224|dgv40e203|dgv92e55|dgv93e55,1000g|DDD:44001|DDD:44096|DDD:44106|DDD:44113|DDD:44114|DDD:44119|dgv2191n100|dgv3e224|dgv40e203|dgv435e214|dgv92e55|dgv93e55|nsv514767,DDD:44001|DDD:44096|DDD:44106|DDD:44113|DDD:44114|DDD:44119|dgv2191n100|dgv3e224|dgv40e203|dgv92e55|dgv93e55|nsv514767,1000g|DDD:44001|DDD:44096|DDD:44106|DDD:44113|DDD:44114|DDD:44129|dgv2191n100|dgv3e224|dgv40e203|dgv437e214|dgv92e55|dgv93e55|nsv514767,1000g|DDD:44001|DDD:44096|DDD:44106|DDD:44113|DDD:44114|DDD:44129|dgv2191n100|dgv3e224|dgv40e203|dgv438e214|dgv92e55|dgv93e55|nsv514767,1000g|DDD:44001|DDD:44096|DDD:44106|DDD:44113|DDD:44129|dgv2191n100|dgv3e224|dgv40e203|dgv438e214|dgv92e55|dgv93e55|nsv514767,DDD:44001|DDD:44096|DDD:44106|DDD:44113|DDD:44129|dgv2191n100|dgv3e224|dgv40e203|dgv92e55|dgv93e55|nsv514767,DDD:44001|DDD:44096|DDD:44106|DDD:44113|DDD:44129|DDD:44147|dgv2191n100|dgv3e224|dgv40e203|dgv92e55|dgv93e55|nsv514767,DDD:44147|DDD:44168|dgv40e203|dgv93e55,DDD:44147|DDD:44168|dgv40e203|dgv93e55,dgv40e203|dgv93e55;B_gain_coord=15:20016329-23487546|15:20167087-22869764,15:20016329-23487546|15:20037886-21236662|15:20144627-21266621|15:20167087-21200251|15:20167087-22588036|15:20167087-22869764|15:20182203-22608281|15:20203950-22588019|15:20388742-22207639,15:20016329-23487546|15:20037886-21236662|15:20144627-21266621|15:20167087-21200251|15:20167087-22588036|15:20167087-22869764|15:20182203-22608281|15:20203950-22588019|15:20388742-22207639,15:20016329-23487546|15:20037886-21236662|15:20144627-21266621|15:20167087-21200251|15:20167087-22588036|15:20167087-22869764|15:20182203-22608281|15:20203950-22588019|15:20388742-22207639,15:20016329-23487546|15:20037886-21236662|15:20144627-21266621|15:20167087-21200251|15:20167087-22588036|15:20167087-22869764|15:20182203-22608281|15:20203950-22588019|15:20388742-22207639|15:20751226-21293606,15:20016329-23487546|15:20037886-21236662|15:20144627-21266621|15:20167087-21200251|15:20167087-22588036|15:20167087-22869764|15:20182203-22608281|15:20203950-22588019|15:20388742-22207639|15:20751226-21293606,15:20016329-23487546|15:20037886-21236662|15:20144627-21266621|15:20167087-21200251|15:20167087-22588036|15:20167087-22869764|15:20182203-22608281|15:20203950-22588019|15:20388742-22207639|15:20751226-21293606,15:20016329-23487546|15:20037886-21236662|15:20144627-21266621|15:20167087-21200251|15:20167087-22588036|15:20167087-22869764|15:20182203-22608281|15:20203950-22588019|15:20388742-22207639|15:20751226-21293606|15:21040437-21077011,15:20016329-23487546|15:20037886-21236662|15:20144627-21266621|15:20167087-21200251|15:20167087-22588036|15:20167087-22869764|15:20182203-22608281|15:20203950-22588019|15:20388742-22207639|15:20751226-21293606|15:21069662-21311925|15:21145102-21164300,15:20016329-23487546|15:20037886-21236662|15:20144627-21266621|15:20167087-21200251|15:20167087-22588036|15:20167087-22869764|15:20182203-22608281|15:20203950-22588019|15:20388742-22207639|15:20751226-21293606|15:21069662-21311925,15:20016329-23487546|15:20144627-21266621|15:20167087-22588036|15:20167087-22869764|15:20182203-22608281|15:20203950-22588019|15:20388742-22207639|15:20751226-21293606|15:21069662-21311925,15:20016329-23487546|15:20167087-22588036|15:20167087-22869764|15:20182203-22608281|15:20203950-22588019|15:20388742-22207639|15:21399090-22661412|15:21904679-21949433|15:21906623-22142846,15:20016329-23487546|15:20167087-22588036|15:20167087-22869764|15:20182203-22608281|15:20203950-22588019|15:20388742-22207639|15:21399090-22661412|15:21906623-22142846,15:20016329-23487546|15:20167087-22588036|15:20167087-22869764|15:20182203-22608281|15:20203950-22588019|15:20388742-22207639|15:21399090-22661412|15:21906623-22142846,15:20016329-23487546|15:20167087-22588036|15:20167087-22869764|15:20182203-22608281|15:20203950-22588019|15:20388742-22207639|15:21399090-22661412,15:20016329-23487546|15:20167087-22588036|15:20167087-22869764|15:20182203-22608281|15:20203950-22588019|15:20388742-22207639|15:21399090-22661412,15:20016329-23487546|15:20167087-22588036|15:20167087-22869764|15:20182203-22608281|15:20203950-22588019|15:21399090-22661412|15:22267463-22591752,15:20016329-23487546|15:20167087-22588036|15:20167087-22869764|15:20182203-22608281|15:20203950-22588019|15:21399090-22661412|15:22267463-22591752|15:22278200-22574827|15:22304657-22588026|15:22307890-22657533|15:22308418-22455534|15:22343966-22372302|15:22343966-22372302|15:22343966-22372302|15:22343966-22372302|15:22343966-22372302|15:22343966-22372302|15:22360686-22387071,15:20016329-23487546|15:20167087-22588036|15:20167087-22869764|15:20182203-22608281|15:20203950-22588019|15:21399090-22661412|15:22267463-22591752|15:22278200-22574827|15:22304657-22588026|15:22307890-22657533|15:22308418-22455534|15:22360686-22387071,15:20016329-23487546|15:20167087-22588036|15:20167087-22869764|15:20182203-22608281|15:20203950-22588019|15:21399090-22661412|15:22267463-22591752|15:22278200-22574827|15:22304657-22588026|15:22307890-22657533|15:22308418-22455534|15:22383478-22434169|15:22383478-22434169|15:22383478-22434169|15:22383478-22434169|15:22383478-22434169|15:22411349-22577661,15:20016329-23487546|15:20167087-22588036|15:20167087-22869764|15:20182203-22608281|15:20203950-22588019|15:21399090-22661412|15:22267463-22591752|15:22278200-22574827|15:22304657-22588026|15:22307890-22657533|15:22308418-22455534|15:22411349-22577661|15:22446740-22506103|15:22446740-22506103|15:22446740-22506103|15:22446740-22506103|15:22446740-22506103,15:20016329-23487546|15:20167087-22588036|15:20167087-22869764|15:20182203-22608281|15:20203950-22588019|15:21399090-22661412|15:22267463-22591752|15:22278200-22574827|15:22304657-22588026|15:22307890-22657533|15:22411349-22577661|15:22446740-22506103|15:22446740-22506103|15:22446740-22506103|15:22446740-22506103|15:22446740-22506103,15:20016329-23487546|15:20167087-22588036|15:20167087-22869764|15:20182203-22608281|15:20203950-22588019|15:21399090-22661412|15:22267463-22591752|15:22278200-22574827|15:22304657-22588026|15:22307890-22657533|15:22411349-22577661,15:20016329-23487546|15:20167087-22588036|15:20167087-22869764|15:20182203-22608281|15:20203950-22588019|15:21399090-22661412|15:22267463-22591752|15:22278200-22574827|15:22304657-22588026|15:22307890-22657533|15:22411349-22577661|15:22519942-22726364,15:20016329-23487546|15:20167087-22869764|15:22519942-22726364|15:22650162-22738662,15:20016329-23487546|15:20167087-22869764|15:22519942-22726364|15:22650162-22738662,15:20016329-23487546|15:20167087-22869764;B_gain_AFmax=0.15,0.39,0.39,0.39,0.39,0.39,0.39,0.39,0.39,0.39,0.39,0.39,0.39,0.39,0.39,0.39,0.39,0.4271,0.4271,0.4271,0.4271,0.4271,0.4271,0.4271,0.15,0.15,0.15;B_loss_source=dgv40e203|dgv94e55,DDD:43992|DDD:44001|dgv40e203|dgv94e55|dgv96e55,DDD:43992|DDD:44001|dgv40e203|dgv94e55|dgv96e55,DDD:43992|DDD:44001|dgv40e203|dgv94e55|dgv96e55,DDD:43992|DDD:44001|dgv40e203|dgv94e55|dgv96e55,DDD:43992|DDD:44001|dgv40e203|dgv94e55|dgv96e55,DDD:43992|DDD:44001|dgv40e203|dgv94e55|dgv96e55,DDD:43992|DDD:44001|dgv40e203|dgv94e55|dgv96e55,DDD:43992|DDD:44001|DDD:44068|dgv40e203|dgv94e55|dgv96e55,DDD:43992|DDD:44001|DDD:44068|dgv40e203|dgv94e55|dgv96e55,DDD:43992|DDD:44001|DDD:44068|dgv40e203|dgv94e55|dgv96e55,DDD:44001|DDD:44096|DDD:44097|DDD:44098|dgv40e203|dgv94e55|dgv96e55,DDD:44001|DDD:44096|DDD:44098|dgv40e203|dgv94e55|dgv96e55,DDD:44001|DDD:44096|DDD:44098|dgv40e203|dgv94e55|dgv96e55,DDD:44001|DDD:44096|dgv40e203|dgv94e55|dgv96e55,DDD:44001|DDD:44096|dgv40e203|dgv94e55|dgv96e55,DDD:44001|DDD:44096|dgv40e203|dgv94e55|dgv96e55,DDD:44001|DDD:44096|DDD:44113|DDD:44114|DDD:44119|dbVar|dgv100e55|dgv2373n100|dgv40e203|dgv94e55|dgv96e55|nsv514767,DDD:44001|DDD:44096|DDD:44113|DDD:44114|DDD:44119|dgv100e55|dgv2373n100|dgv40e203|dgv94e55|dgv96e55|nsv514767,DDD:44001|DDD:44096|DDD:44113|DDD:44114|DDD:44129|dbVar|dgv100e55|dgv2373n100|dgv40e203|dgv94e55|dgv96e55|nsv514767,DDD:44001|DDD:44096|DDD:44113|DDD:44114|DDD:44129|dbVar|dgv100e55|dgv2373n100|dgv40e203|dgv94e55|dgv96e55|nsv514767,DDD:44001|DDD:44096|DDD:44113|DDD:44129|dbVar|dgv100e55|dgv2373n100|dgv40e203|dgv94e55|dgv96e55|nsv514767,DDD:44001|DDD:44096|DDD:44113|DDD:44129|DDD:44139|dgv100e55|dgv2373n100|dgv40e203|dgv94e55|dgv96e55|nsv514767,DDD:44001|DDD:44096|DDD:44113|DDD:44129|DDD:44147|dgv100e55|dgv2373n100|dgv40e203|dgv94e55|dgv96e55|nsv514767,DDD:44147|DDD:44168|dgv40e203|dgv94e55,DDD:44147|DDD:44168|dgv40e203|dgv94e55,dgv40e203|dgv94e55;B_loss_coord=15:20016329-23487546|15:20167087-23222284,15:20016329-23487546|15:20144627-21266621|15:20167087-23222284|15:20167090-22588036|15:20182203-22608281,15:20016329-23487546|15:20144627-21266621|15:20167087-23222284|15:20167090-22588036|15:20182203-22608281,15:20016329-23487546|15:20144627-21266621|15:20167087-23222284|15:20167090-22588036|15:20182203-22608281,15:20016329-23487546|15:20144627-21266621|15:20167087-23222284|15:20167090-22588036|15:20182203-22608281,15:20016329-23487546|15:20144627-21266621|15:20167087-23222284|15:20167090-22588036|15:20182203-22608281,15:20016329-23487546|15:20144627-21266621|15:20167087-23222284|15:20167090-22588036|15:20182203-22608281,15:20016329-23487546|15:20144627-21266621|15:20167087-23222284|15:20167090-22588036|15:20182203-22608281,15:20016329-23487546|15:20144627-21266621|15:20167087-23222284|15:20167090-22588036|15:20182203-22608281|15:21069662-21311925,15:20016329-23487546|15:20144627-21266621|15:20167087-23222284|15:20167090-22588036|15:20182203-22608281|15:21069662-21311925,15:20016329-23487546|15:20144627-21266621|15:20167087-23222284|15:20167090-22588036|15:20182203-22608281|15:21069662-21311925,15:20016329-23487546|15:20167087-23222284|15:20167090-22588036|15:20182203-22608281|15:21399090-22661412|15:21904679-21949433|15:21906623-22142846,15:20016329-23487546|15:20167087-23222284|15:20167090-22588036|15:20182203-22608281|15:21399090-22661412|15:21906623-22142846,15:20016329-23487546|15:20167087-23222284|15:20167090-22588036|15:20182203-22608281|15:21399090-22661412|15:21906623-22142846,15:20016329-23487546|15:20167087-23222284|15:20167090-22588036|15:20182203-22608281|15:21399090-22661412,15:20016329-23487546|15:20167087-23222284|15:20167090-22588036|15:20182203-22608281|15:21399090-22661412,15:20016329-23487546|15:20167087-23222284|15:20167090-22588036|15:20182203-22608281|15:21399090-22661412,15:20016329-23487546|15:20167087-23222284|15:20167090-22588036|15:20182203-22608281|15:21399090-22661412|15:22280466-22588019|15:22304657-22588026|15:22307890-22657533|15:22308418-22455534|15:22320058-22588019|chr15:22343965-22372302|15:22360686-22387071,15:20016329-23487546|15:20167087-23222284|15:20167090-22588036|15:20182203-22608281|15:21399090-22661412|15:22280466-22588019|15:22304657-22588026|15:22307890-22657533|15:22308418-22455534|15:22320058-22588019|15:22360686-22387071,15:20016329-23487546|15:20167087-23222284|15:20167090-22588036|15:20182203-22608281|15:21399090-22661412|15:22280466-22588019|15:22304657-22588026|15:22307890-22657533|15:22308418-22455534|15:22320058-22588019|chr15:22383477-22434169|15:22411349-22577661,15:20016329-23487546|15:20167087-23222284|15:20167090-22588036|15:20182203-22608281|15:21399090-22661412|15:22280466-22588019|15:22304657-22588026|15:22307890-22657533|15:22308418-22455534|15:22320058-22588019|15:22411349-22577661|chr15:22446739-22506103,15:20016329-23487546|15:20167087-23222284|15:20167090-22588036|15:20182203-22608281|15:21399090-22661412|15:22280466-22588019|15:22304657-22588026|15:22307890-22657533|15:22320058-22588019|15:22411349-22577661|chr15:22446739-22506103,15:20016329-23487546|15:20167087-23222284|15:20167090-22588036|15:20182203-22608281|15:21399090-22661412|15:22280466-22588019|15:22304657-22588026|15:22307890-22657533|15:22320058-22588019|15:22411349-22577661|15:22475646-22537915,15:20016329-23487546|15:20167087-23222284|15:20167090-22588036|15:20182203-22608281|15:21399090-22661412|15:22280466-22588019|15:22304657-22588026|15:22307890-22657533|15:22320058-22588019|15:22411349-22577661|15:22519942-22726364,15:20016329-23487546|15:20167087-23222284|15:22519942-22726364|15:22650162-22738662,15:20016329-23487546|15:20167087-23222284|15:22519942-22726364|15:22650162-22738662,15:20016329-23487546|15:20167087-23222284;B_loss_AFmax=0.1,0.271,0.271,0.271,0.271,0.271,0.271,0.271,0.271,0.271,0.271,0.13,0.13,0.13,0.13,0.13,0.13,0.13,0.13,0.13,0.13,0.13,0.13,0.13,0.1,0.1,0.1;B_inv_source=.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,IMH,IMH,IMH;B_inv_coord=.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,15:22658037-28688749,15:22658037-28688749,15:22658037-28688749;B_inv_AFmax=.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,0.157,0.157,0.157;po_B_gain_someG_source=15:20037886-21236662_DDD:43986|15:20167087-21200251_dgv91e55|15:20167087-22869764_dgv93e55|15:20203950-22588019_dgv2191n100|15:20550641-20637800_nsv514762|15:20575412-20599635_DDD:44041|15:20598943-20625797_1000g|15:20598943-20625797_1000g|15:20598943-20625797_1000g|15:20650251-20710056_nsv514763|15:20717000-20724000_gnomAD-SV_v2.1_DUP_15_39413|15:20749534-20773538_DDD:44053|15:20779661-20885221_DDD:44055|15:20786000-20827000_gnomAD-SV_v2.1_DUP_15_39420|15:20846722-20867075_1000g|15:20846722-20867075_1000g|15:20846722-20867075_1000g|15:20935077-20960284_nsv514764|15:21069662-21311925_DDD:44068|15:21153622-21170901_nsv514766...;po_B_gain_someG_coord=15:20016329-23487546_dgv40e203|15:20144627-21266621_DDD:43992|15:20167087-22588036_dgv92e55|15:20182203-22608281_DDD:44001|15:20388742-22207639_TS40:ISCA-46686|15:20556528-20624827_DDD:44039|15:20598943-20625797_1000g|15:20598943-20625797_1000g|15:20598943-20625797_1000g|15:20598943-20625797_dgv430e214|15:20686000-20711550_gnomAD-SV_v2.1_DUP_15_39411|15:20746872-20747023_DDD:44052|15:20751226-21293606_esv3892595|15:20783000-20799000_gnomAD-SV_v2.1_DUP_15_39419|15:20846722-20867075_1000g|15:20846722-20867075_1000g|15:20846722-20867075_1000g|15:20846722-20867075_dgv431e214|15:21040437-21077011_nsv514765|15:21145102-21164300_TS40:ISCA-46688...;po_B_loss_someG_source=15:20144627-21266621_DDD:43992|15:20167090-22588036_dgv96e55|15:20396654-20496584_DDD:44013|15:20468142-20468256_DDD:44028|15:20547692-20548186_IMH|15:20575412-20599635_DDD:44041|15:20581464-20589613_esv2674516|15:20587419-20587601_gnomAD-SV_v2.1_DEL_15_145824|15:20698000-20706500_gnomAD-SV_v2.1_DEL_15_145825|chr15:20729175-20745525_dbVar|15:20749534-20773538_DDD:44053|chr15:20781000-20811000_dbVar|chr15:20820627-20821162_dbVar|chr15:20820696-20820748_dbVar|chr15:20891428-20891785_dbVar|chr15:20976350-20994050_dbVar|15:21042050-21056300_HI40:ISCA-46469|15:21042050-21056300_gnomAD-SV_v2.1_DEL_15_145837|chr15:21200932-21201488_dbVar|15:21321039-21325126_DDD:44088...;po_B_loss_someG_coord=15:20016329-23487546_dgv40e203|15:20167087-23222284_dgv94e55|15:20182203-22608281_DDD:44001|chr15:20436850-20437443_dbVar|chr15:20511834-20511893_dbVar|15:20556528-20624827_DDD:44039|15:20581414-20589751_IMH|chr15:20587419-20587601_dbVar|chr15:20698000-20706500_dbVar|15:20729175-20745525_HI40:ISCA-46468|chr15:20732300-20738500_dbVar|15:20779661-20885221_DDD:44055|chr15:20806100-20823500_dbVar|15:20820627-20821162_gnomAD-SV_v2.1_DEL_15_145830|chr15:20881220-20881325_dbVar|15:20945597-20946011_esv2664547|chr15:21017763-21017994_dbVar|chr15:21042050-21056300_dbVar|15:21069662-21311925_DDD:44068|chr15:21282800-21314300_dbVar...;GC_content_left=0.38;GC_content_right=0.455;Repeat_coord_right=15:22765220-22765620|15:22765771-22766019;Repeat_type_right=L1MC4|L2;SegDup_left=15:20345908-20498625|15:20390971-20432871;SegDup_right=15:22754054-22770109;ENCODE_blacklist_left=15:20200401-22365100;ENCODE_blacklist_characteristics_left=High_Signal_Region;DDD_HI_percent=93.81,.,.,93.81,.,.,.,92.58,.,.,.,.,.,91.86,.,.,.,76.23,75.33,.,.,.,.,.,.,.,93.48;ExAC_synZ=2.22375841006203,.,.,0.630577750419089,.,.,.,2.22375841006203,.,.,.,.,.,.,.,.,.,.,-0.271906921498889,.,.,.,.,.,.,.,.;ExAC_misZ=2.58284576037233,.,.,0.0606178603183018,.,.,.,2.58284576037233,.,.,.,.,.,.,.,.,.,.,-0.565772314050669,.,.,.,.,.,.,.,.;NCBI_gene_ID=.,646096,283755,727832,729786,606,100422949,100287399,100847060,348120,654499,.,646243,100996331,440225,727924,101927079,390538,283694,390539,388077,646370,100302233,646396,100616223,100132979,283767;HGNC_gene_ID=.,HGNC:43578,HGNC:4871,HGNC:37225,HGNC:32375,HGNC:1007,HGNC:38324,HGNC:48327,HGNC:43522,HGNC:28003,HGNC:31024,.,HGNC:33973,HGNC:33734,HGNC:38664,HGNC:53069,HGNC:56199,HGNC:15373,HGNC:15375,HGNC:15374,HGNC:5563,HGNC:5565,HGNC:35336,HGNC:38797,HGNC:41860,HGNC:32376,HGNC:37444;LOEUF_bin=8,.,.,8,.,.,.,8,.,.,.,.,.,9,.,.,.,9,9,.,.,.,.,.,.,.,8;GnomAD_pLI=0.35277,.,.,2.2875000000000003e-19,.,.,.,0.042457,.,.,.,.,.,0.35277,.,.,.,3.9447e-08,5.1332e-05,.,.,.,.,.,.,.,2.3586e-12;ExAC_pLI=0.57189,.,.,0.086864,.,.,.,0.57189,.,.,.,.,.,.,.,.,.,.,0.018051,.,.,.,.,.,.,.,.;AnnotSV_ranking_score=-1;AnnotSV_ranking_criteria=1A_(cf_Gene_count,_RE_gene,_+0.00)|2D_(cf_B_gain_source,_-1.00)|2B_(cf_po_P_gain_source,_TS,_OMIM_morbid,_+0.00)|3A_(26_genes,_+0.00)|4O_(cf_po_B_gain_AllG_source,_B_gain_source,_po_B_gain_SomeG_source,_+0.00)|5F_(+0.00);ACMG_class=1,full=1,full=1,full=1,full=1,full=1,full=1,full=1,full=1,full=1,full=1,full=1,full=1,full=1,full=1,full=1,full=1,full=1,full=1,full=1,full=1,full=1,full=1,full=1,full=1,full=1,full=1;END=22765687;SVLEN=2332836\tGT\t1/.\n15\t20564609\t.\tC\t<DEL>\t.\tPASS\tAnnotSV_ID=15_20564609_22409391_DEL_1;SV_start=20564609;Biologist_ranking=Benign;Annotation_mode=full,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split;CytoBand=q11.1-q11.2,q11.1-q11.2,q11.2,q11.2,q11.2,q11.2,q11.2,q11.2,q11.2,q11.2,q11.2,q11.2,q11.2,q11.2,q11.2,q11.2,q11.2,q11.2;Gene_name=HERC2P3|GOLGA6L6|GOLGA8CP|NBEAP1|MIR3118-2|POTEB2|MIR5701-1|LINC01193|FAM30C|LOC646214|CXADRP2|POTEB|NF1P2|LINC02203|OR4M2-OT1|OR4M2|OR4N4,HERC2P3,GOLGA6L6,GOLGA8CP,NBEAP1,MIR3118-2,POTEB2,MIR5701-1,LINC01193,FAM30C,LOC646214,CXADRP2,POTEB,NF1P2,LINC02203,OR4M2-OT1,OR4M2,OR4N4;Closest_left=CHEK2P2;Closest_right=OR4N3P;Gene_count=17;Tx=.,NR_036432,NM_001145004,NR_027411,NR_027992,NR_036062,NM_001277303,NR_049886,NR_040094,NR_145444,NR_027053,NR_024387,NM_001277304,NR_028506,NR_152818,NR_110480,NM_001004719,NM_001005241;Tx_version=.,1,2,2,1,2,1,1,1,1,2,1,2,2,1,1,2,4;Tx_start=.,20613648,20737093,20767673,20874796,21038123,21040700,21145580,21145766,21208605,21932513,22014402,22051852,22133180,22195582,22278030,22368477,22382472;Tx_end=.,20711433,20747114,20781026,20961480,21038198,21071643,21145662,21198633,21255165,21940739,22016878,22083259,22145802,22199978,22383564,22369561,22383813;Overlapped_tx_length=.,97785,10021,13353,86684,75,30943,82,52867,46560,8226,2476,31407,12622,4396,105534,1084,1341;Overlapped_CDS_length=.,0,2175,0,0,0,1635,0,0,0,0,0,1635,0,0,0,942,951;Overlapped_CDS_percent=.,0,100,0,0,0,100,0,0,0,0,0,100,0,0,0,95,100;Frameshift=.,.,no,.,.,.,no,.,.,.,.,.,no,.,.,.,no,no;Exon_count=.,26,11,18,3,1,11,1,5,4,1,1,11,8,3,9,1,1;Location=.,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd;Location2=.,UTR,5'UTR-3'UTR,UTR,UTR,UTR,5'UTR-3'UTR,UTR,UTR,UTR,UTR,UTR,5'UTR-3'UTR,UTR,UTR,UTR,5'UTR-3'UTR,5'UTR-3'UTR;Intersect_start=.,20613648,20737093,20767673,20874796,21038123,21040700,21145580,21145766,21208605,21932513,22014402,22051852,22133180,22195582,22278030,22368477,22382472;Intersect_end=.,20711433,20747114,20781026,20961480,21038198,21071643,21145662,21198633,21255165,21940739,22016878,22083259,22145802,22199978,22383564,22369561,22383813;RE_gene=ADAM22_(morbid/RE=mTL_miRNA)|CA12_(morbid/RE=mTL_miRNA)|CDKN1B_(HI=3/morbid/RE=mTL_miRNA)|DICER1_(HI=3/morbid/RE=mTL_miRNA)|EDAR_(morbid/RE=mTL_miRNA)|EGLN1_(morbid/RE=mTL_miRNA)|ERBB3_(morbid/RE=mTL_miRNA)|GABRB2_(morbid/RE=mTL_miRNA)|GATA6_(HI=3/morbid/RE=mTL_miRNA)|HSPD1_(morbid/RE=mTL_miRNA)|IL6ST_(morbid/RE=mTL_miRNA)|INF2_(morbid/RE=mTL_miRNA)|ISCU_(morbid/RE=mTL_miRNA)|KAT6B_(HI=3/morbid/RE=mTL_miRNA)|KCNJ10_(morbid/RE=mTL_miRNA)|KLHL3_(morbid/RE=mTL_miRNA)|KMT2D_(HI=3/morbid/RE=mTL_miRNA)|LRIG2_(morbid/RE=mTL_miRNA)|MAGEL2_(morbid/RE=ABC_enhancer)|MAPKAPK5_(morbid/RE=mTL_miRNA)|MKRN3_(morbid/RE=ABC_enhancer)|NDUFS1_(morbid/RE=mTL_miRNA)|NIPA1_(morbid/RE=ABC_enhancer)|NPM1_(morbid/RE=mTL_miRNA)|PEX26_(morbid/RE=mTL_miRNA)|PHF12_(HI=3/RE=mTL_miRNA)|PIGP_(morbid/RE=mTL_miRNA)|POT1_(morbid/RE=mTL_miRNA)|PRLR_(morbid/RE=mTL_miRNA)|PURA_(HI=3/morbid/RE=mTL_miRNA)|RAC3_(morbid/RE=mTL_miRNA)|SH2D1A_(HI=3/morbid/RE=mTL_miRNA)|SKI_(morbid/RE=mTL_miRNA)|SLC6A6_(morbid/RE=mTL_miRNA)|SLC7A14_(morbid/RE=mTL_miRNA)|SLC7A7_(morbid/RE=mTL_miRNA)|SMAD4_(HI=3/morbid/RE=mTL_miRNA)|SMAD6_(morbid/RE=mTL_miRNA)|SMOC1_(morbid/RE=mTL_miRNA)|SMOC2_(morbid/RE=mTL_miRNA)|SOX17_(morbid/RE=mTL_miRNA)|TULP1_(morbid/RE=mTL_miRNA)|USP48_(morbid/RE=mTL_miRNA)|ZBTB18_(HI=3/morbid/RE=mTL_miRNA)|ZNF711_(morbid/RE=mTL_miRNA);po_P_gain_source=dbVar:nssv15172447|dbVar:nssv15149081|dbVar:nssv15148902|dbVar:nssv15125410|dbVar:nssv15127689|dbVar:nssv15127462|dbVar:nssv15126524|dbVar:nssv15124656|dbVar:nssv15127659|dbVar:nssv15126021|dbVar:nssv15172190|dbVar:nssv15150569|dbVar:nssv15147052|dbVar:nssv15145742|dbVar:nssv15147053|dbVar:nssv15175556|dbVar:nssv15145744|dbVar:nssv15774514|dbVar:nssv15148785|dbVar:nssv15605894|dbVar:nssv15149135|dbVar:nssv15148575|dbVar:nssv15147687|dbVar:nssv15605895|dbVar:nssv15147058|dbVar:nssv15145747|dbVar:nssv15146452|dbVar:nssv15149084|dbVar:nssv15147355|dbVar:nssv15149616|dbVar:nssv15147801|dbVar:nssv15146958|dbVar:nssv15149124|dbVar:nssv15123304|dbVar:nssv15147513|dbVar:nssv15127079|dbVar:nssv15605897|dbVar:nssv15605899;po_P_gain_coord=15:20016812-102493540|15:20044343-28924405|15:20045835-32914140|15:20063341-102521392|15:20063341-29093456|15:20063341-29209620|15:20063341-30448351|15:20063341-32439302|15:20063341-32942613|15:20063341-32986584|15:20071674-102461162|15:20071674-30737344|15:20085003-28947309|15:20085003-29210720|15:20085004-28178425|15:20102541-29031690|15:20110723-28408897|15:20179528-32998070|15:20190549-28406650|15:20190549-30300265|15:20190549-32386089|15:20190549-32917801|15:20190549-32917857|15:20191653-28525310|15:20207714-30641396|15:20207714-32413623|15:20251769-28631040|15:20306550-26208861|15:20686197-30509384|15:20733396-102511616|15:20733396-28406650|15:20733396-28406709|15:20848461-27662530|15:21129985-28535266|15:22304597-28577787|15:22318645-29209620|15:22382861-32396457|15:22383300-32917689;po_P_gain_percent=2.24|20.77|14.34|2.24|20.43|20.17|17.76|14.91|14.32|14.27|2.24|17.30|20.82|20.22|22.79|20.66|22.23|14.39|22.45|18.25|15.13|14.49|14.49|22.14|17.68|15.11|22.02|31.26|17.54|2.05|21.84|21.84|22.91|17.28|1.67|1.32|0.26|0.25;po_P_loss_source=dbVar:nssv16865885|dbVar:nssv18326337|dbVar:nssv15605896|dbVar:nssv15123310|dbVar:nssv18841918|dbVar:nssv16208656|dbVar:nssv18792791|dbVar:nssv16215320|dbVar:nssv15147060;po_P_loss_coord=15:20612841-23272733|15:20739498-28566579|15:20848751-32925141|15:21129985-32514926|15:21172301-26208861|15:21903816-23272733|15:22070541-23262343|15:22299435-23226254|15:22318598-28940098;po_P_loss_percent=67.54|21.33|12.92|11.24|24.56|36.93|28.43|11.86|1.37;B_gain_source=DDD:44001|dgv2191n100|dgv40e203|dgv92e55|dgv93e55,DDD:43986|DDD:43992|DDD:44001|TS40:ISCA-46686|dgv2191n100|dgv40e203|dgv91e55|dgv92e55|dgv93e55,DDD:43986|DDD:43992|DDD:44001|TS40:ISCA-46686|dgv2191n100|dgv40e203|dgv91e55|dgv92e55|dgv93e55,DDD:43986|DDD:43992|DDD:44001|TS40:ISCA-46686|dgv2191n100|dgv40e203|dgv91e55|dgv92e55|dgv93e55|esv3892595,DDD:43986|DDD:43992|DDD:44001|TS40:ISCA-46686|dgv2191n100|dgv40e203|dgv91e55|dgv92e55|dgv93e55|esv3892595,DDD:43986|DDD:43992|DDD:44001|TS40:ISCA-46686|dgv2191n100|dgv40e203|dgv91e55|dgv92e55|dgv93e55|esv3892595,DDD:43986|DDD:43992|DDD:44001|TS40:ISCA-46686|dgv2191n100|dgv40e203|dgv91e55|dgv92e55|dgv93e55|esv3892595|nsv514765,DDD:43986|DDD:43992|DDD:44001|DDD:44068|TS40:ISCA-46686|TS40:ISCA-46688|dgv2191n100|dgv40e203|dgv91e55|dgv92e55|dgv93e55|esv3892595,DDD:43986|DDD:43992|DDD:44001|DDD:44068|TS40:ISCA-46686|dgv2191n100|dgv40e203|dgv91e55|dgv92e55|dgv93e55|esv3892595,DDD:43992|DDD:44001|DDD:44068|TS40:ISCA-46686|dgv2191n100|dgv40e203|dgv92e55|dgv93e55|esv3892595,DDD:44001|DDD:44096|DDD:44097|DDD:44098|TS40:ISCA-46686|dgv2191n100|dgv40e203|dgv92e55|dgv93e55,DDD:44001|DDD:44096|DDD:44098|TS40:ISCA-46686|dgv2191n100|dgv40e203|dgv92e55|dgv93e55,DDD:44001|DDD:44096|DDD:44098|TS40:ISCA-46686|dgv2191n100|dgv40e203|dgv92e55|dgv93e55,DDD:44001|DDD:44096|TS40:ISCA-46686|dgv2191n100|dgv40e203|dgv92e55|dgv93e55,DDD:44001|DDD:44096|TS40:ISCA-46686|dgv2191n100|dgv40e203|dgv92e55|dgv93e55,DDD:44001|DDD:44096|dgv2191n100|dgv3e224|dgv40e203|dgv92e55|dgv93e55,1000g|DDD:44001|DDD:44096|DDD:44106|DDD:44113|DDD:44114|DDD:44119|dgv2191n100|dgv3e224|dgv40e203|dgv435e214|dgv92e55|dgv93e55|nsv514767,DDD:44001|DDD:44096|DDD:44106|DDD:44113|DDD:44114|DDD:44119|dgv2191n100|dgv3e224|dgv40e203|dgv92e55|dgv93e55|nsv514767;B_gain_coord=15:20016329-23487546|15:20167087-22588036|15:20167087-22869764|15:20182203-22608281|15:20203950-22588019,15:20016329-23487546|15:20037886-21236662|15:20144627-21266621|15:20167087-21200251|15:20167087-22588036|15:20167087-22869764|15:20182203-22608281|15:20203950-22588019|15:20388742-22207639,15:20016329-23487546|15:20037886-21236662|15:20144627-21266621|15:20167087-21200251|15:20167087-22588036|15:20167087-22869764|15:20182203-22608281|15:20203950-22588019|15:20388742-22207639,15:20016329-23487546|15:20037886-21236662|15:20144627-21266621|15:20167087-21200251|15:20167087-22588036|15:20167087-22869764|15:20182203-22608281|15:20203950-22588019|15:20388742-22207639|15:20751226-21293606,15:20016329-23487546|15:20037886-21236662|15:20144627-21266621|15:20167087-21200251|15:20167087-22588036|15:20167087-22869764|15:20182203-22608281|15:20203950-22588019|15:20388742-22207639|15:20751226-21293606,15:20016329-23487546|15:20037886-21236662|15:20144627-21266621|15:20167087-21200251|15:20167087-22588036|15:20167087-22869764|15:20182203-22608281|15:20203950-22588019|15:20388742-22207639|15:20751226-21293606,15:20016329-23487546|15:20037886-21236662|15:20144627-21266621|15:20167087-21200251|15:20167087-22588036|15:20167087-22869764|15:20182203-22608281|15:20203950-22588019|15:20388742-22207639|15:20751226-21293606|15:21040437-21077011,15:20016329-23487546|15:20037886-21236662|15:20144627-21266621|15:20167087-21200251|15:20167087-22588036|15:20167087-22869764|15:20182203-22608281|15:20203950-22588019|15:20388742-22207639|15:20751226-21293606|15:21069662-21311925|15:21145102-21164300,15:20016329-23487546|15:20037886-21236662|15:20144627-21266621|15:20167087-21200251|15:20167087-22588036|15:20167087-22869764|15:20182203-22608281|15:20203950-22588019|15:20388742-22207639|15:20751226-21293606|15:21069662-21311925,15:20016329-23487546|15:20144627-21266621|15:20167087-22588036|15:20167087-22869764|15:20182203-22608281|15:20203950-22588019|15:20388742-22207639|15:20751226-21293606|15:21069662-21311925,15:20016329-23487546|15:20167087-22588036|15:20167087-22869764|15:20182203-22608281|15:20203950-22588019|15:20388742-22207639|15:21399090-22661412|15:21904679-21949433|15:21906623-22142846,15:20016329-23487546|15:20167087-22588036|15:20167087-22869764|15:20182203-22608281|15:20203950-22588019|15:20388742-22207639|15:21399090-22661412|15:21906623-22142846,15:20016329-23487546|15:20167087-22588036|15:20167087-22869764|15:20182203-22608281|15:20203950-22588019|15:20388742-22207639|15:21399090-22661412|15:21906623-22142846,15:20016329-23487546|15:20167087-22588036|15:20167087-22869764|15:20182203-22608281|15:20203950-22588019|15:20388742-22207639|15:21399090-22661412,15:20016329-23487546|15:20167087-22588036|15:20167087-22869764|15:20182203-22608281|15:20203950-22588019|15:20388742-22207639|15:21399090-22661412,15:20016329-23487546|15:20167087-22588036|15:20167087-22869764|15:20182203-22608281|15:20203950-22588019|15:21399090-22661412|15:22267463-22591752,15:20016329-23487546|15:20167087-22588036|15:20167087-22869764|15:20182203-22608281|15:20203950-22588019|15:21399090-22661412|15:22267463-22591752|15:22278200-22574827|15:22304657-22588026|15:22307890-22657533|15:22308418-22455534|15:22343966-22372302|15:22343966-22372302|15:22343966-22372302|15:22343966-22372302|15:22343966-22372302|15:22343966-22372302|15:22360686-22387071,15:20016329-23487546|15:20167087-22588036|15:20167087-22869764|15:20182203-22608281|15:20203950-22588019|15:21399090-22661412|15:22267463-22591752|15:22278200-22574827|15:22304657-22588026|15:22307890-22657533|15:22308418-22455534|15:22360686-22387071;B_gain_AFmax=0.39,0.39,0.39,0.39,0.39,0.39,0.39,0.39,0.39,0.39,0.39,0.39,0.39,0.39,0.39,0.39,0.4271,0.4271;B_loss_source=DDD:44001|dgv40e203|dgv94e55|dgv96e55,DDD:43992|DDD:44001|dgv40e203|dgv94e55|dgv96e55,DDD:43992|DDD:44001|dgv40e203|dgv94e55|dgv96e55,DDD:43992|DDD:44001|dgv40e203|dgv94e55|dgv96e55,DDD:43992|DDD:44001|dgv40e203|dgv94e55|dgv96e55,DDD:43992|DDD:44001|dgv40e203|dgv94e55|dgv96e55,DDD:43992|DDD:44001|dgv40e203|dgv94e55|dgv96e55,DDD:43992|DDD:44001|DDD:44068|dgv40e203|dgv94e55|dgv96e55,DDD:43992|DDD:44001|DDD:44068|dgv40e203|dgv94e55|dgv96e55,DDD:43992|DDD:44001|DDD:44068|dgv40e203|dgv94e55|dgv96e55,DDD:44001|DDD:44096|DDD:44097|DDD:44098|dgv40e203|dgv94e55|dgv96e55,DDD:44001|DDD:44096|DDD:44098|dgv40e203|dgv94e55|dgv96e55,DDD:44001|DDD:44096|DDD:44098|dgv40e203|dgv94e55|dgv96e55,DDD:44001|DDD:44096|dgv40e203|dgv94e55|dgv96e55,DDD:44001|DDD:44096|dgv40e203|dgv94e55|dgv96e55,DDD:44001|DDD:44096|dgv40e203|dgv94e55|dgv96e55,DDD:44001|DDD:44096|DDD:44113|DDD:44114|DDD:44119|dbVar|dgv100e55|dgv2373n100|dgv40e203|dgv94e55|dgv96e55|nsv514767,DDD:44001|DDD:44096|DDD:44113|DDD:44114|DDD:44119|dgv100e55|dgv2373n100|dgv40e203|dgv94e55|dgv96e55|nsv514767;B_loss_coord=15:20016329-23487546|15:20167087-23222284|15:20167090-22588036|15:20182203-22608281,15:20016329-23487546|15:20144627-21266621|15:20167087-23222284|15:20167090-22588036|15:20182203-22608281,15:20016329-23487546|15:20144627-21266621|15:20167087-23222284|15:20167090-22588036|15:20182203-22608281,15:20016329-23487546|15:20144627-21266621|15:20167087-23222284|15:20167090-22588036|15:20182203-22608281,15:20016329-23487546|15:20144627-21266621|15:20167087-23222284|15:20167090-22588036|15:20182203-22608281,15:20016329-23487546|15:20144627-21266621|15:20167087-23222284|15:20167090-22588036|15:20182203-22608281,15:20016329-23487546|15:20144627-21266621|15:20167087-23222284|15:20167090-22588036|15:20182203-22608281,15:20016329-23487546|15:20144627-21266621|15:20167087-23222284|15:20167090-22588036|15:20182203-22608281|15:21069662-21311925,15:20016329-23487546|15:20144627-21266621|15:20167087-23222284|15:20167090-22588036|15:20182203-22608281|15:21069662-21311925,15:20016329-23487546|15:20144627-21266621|15:20167087-23222284|15:20167090-22588036|15:20182203-22608281|15:21069662-21311925,15:20016329-23487546|15:20167087-23222284|15:20167090-22588036|15:20182203-22608281|15:21399090-22661412|15:21904679-21949433|15:21906623-22142846,15:20016329-23487546|15:20167087-23222284|15:20167090-22588036|15:20182203-22608281|15:21399090-22661412|15:21906623-22142846,15:20016329-23487546|15:20167087-23222284|15:20167090-22588036|15:20182203-22608281|15:21399090-22661412|15:21906623-22142846,15:20016329-23487546|15:20167087-23222284|15:20167090-22588036|15:20182203-22608281|15:21399090-22661412,15:20016329-23487546|15:20167087-23222284|15:20167090-22588036|15:20182203-22608281|15:21399090-22661412,15:20016329-23487546|15:20167087-23222284|15:20167090-22588036|15:20182203-22608281|15:21399090-22661412,15:20016329-23487546|15:20167087-23222284|15:20167090-22588036|15:20182203-22608281|15:21399090-22661412|15:22280466-22588019|15:22304657-22588026|15:22307890-22657533|15:22308418-22455534|15:22320058-22588019|chr15:22343965-22372302|15:22360686-22387071,15:20016329-23487546|15:20167087-23222284|15:20167090-22588036|15:20182203-22608281|15:21399090-22661412|15:22280466-22588019|15:22304657-22588026|15:22307890-22657533|15:22308418-22455534|15:22320058-22588019|15:22360686-22387071;B_loss_AFmax=0.13,0.271,0.271,0.271,0.271,0.271,0.271,0.271,0.271,0.271,0.13,0.13,0.13,0.13,0.13,0.13,0.13,0.13;po_B_gain_someG_source=15:20037886-21236662_DDD:43986|15:20167087-21200251_dgv91e55|15:20167087-22869764_dgv93e55|15:20203950-22588019_dgv2191n100|15:20550641-20637800_nsv514762|15:20575412-20599635_DDD:44041|15:20598943-20625797_1000g|15:20598943-20625797_1000g|15:20598943-20625797_1000g|15:20650251-20710056_nsv514763|15:20717000-20724000_gnomAD-SV_v2.1_DUP_15_39413|15:20749534-20773538_DDD:44053|15:20779661-20885221_DDD:44055|15:20786000-20827000_gnomAD-SV_v2.1_DUP_15_39420|15:20846722-20867075_1000g|15:20846722-20867075_1000g|15:20846722-20867075_1000g|15:20935077-20960284_nsv514764|15:21069662-21311925_DDD:44068|15:21153622-21170901_nsv514766...;po_B_gain_someG_coord=15:20016329-23487546_dgv40e203|15:20144627-21266621_DDD:43992|15:20167087-22588036_dgv92e55|15:20182203-22608281_DDD:44001|15:20388742-22207639_TS40:ISCA-46686|15:20556528-20624827_DDD:44039|15:20598943-20625797_1000g|15:20598943-20625797_1000g|15:20598943-20625797_1000g|15:20598943-20625797_dgv430e214|15:20686000-20711550_gnomAD-SV_v2.1_DUP_15_39411|15:20746872-20747023_DDD:44052|15:20751226-21293606_esv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36-34836826|15:34721237-34836826|15:34721237-34836826|15:34726358-34872885|chr15:34726358-34872885|15:34726358-34872885;B_loss_AFmax=0.168;po_B_gain_someG_source=15:34741740-34742019_1000g;po_B_gain_someG_coord=15:34721237-34836826_1000g;po_B_loss_someG_source=15:34674031-35008201_DDD:44673|15:34678778-34862723_dgv43e203|chr15:34710127-34856557_dbVar|15:34714112-34830932_dgv2562n100|15:34718595-34807869_esv3892663|chr15:34721236-34836826_dbVar|15:34721237-34836826_esv3636115|chr15:34726358-34872885_dbVar|15:34741740-34742019_1000g|15:34741749-34742029_esv2678102|15:34741752-34742021_gnomAD-SV_v2.1_DEL_15_146741|chr15:34746988-34747300_dbVar|15:34779146-34783492_esv2667455|chr15:34785640-34786870_dbVar|15:34802473-34810922_1000g|15:34802548-34810836_DDD:44684|15:34802595-34810858_gnomAD-SV_v2.1_DEL_15_146744;po_B_loss_someG_coord=15:34647569-34871296_nsv517751|15:34674425-35009836_DDD:44674|15:34710127-34856557_HI40:ISCA-46481|15:34710127-34856557_gnomAD-SV_v2.1_DEL_15_146738|15:34718595-34800595_dgv312n27|15:34718595-34871296_dgv313n27|15:34721237-34836826_1000g|15:34726358-34872885_HI40:ISCA-46482|15:34726358-34872885_gnomAD-SV_v2.1_DEL_15_146739|chr15:34741740-34742019_dbVar|chr15:34741752-34742021_dbVar|chr15:34743793-34743843_dbVar|15:34746988-34747300_gnomAD-SV_v2.1_DEL_15_146743|15:34779302-34783300_DDD:44682|chr15:34802472-34810922_dbVar|15:34802473-34810922_esv3636118|chr15:34802595-34810858_dbVar;GC_content_left=0.34;GC_content_right=0.66;SegDup_left=15:34730084-34776964;SegDup_right=15:34782963-34820866|15:34800001-34813836;AnnotSV_ranking_score=-1;AnnotSV_ranking_criteria=1A_(cf_Gene_count,_RE_gene,_+0.00)|2F/4O_(cf_B_loss_source,_-1.00)|2B_(cf_po_P_loss_source,_HI,_OMIM_morbid,_+0.00|3A_(0_gene,_+0.00)|5F_(+0.00);ACMG_class=1;END=34806953;SVLEN=-71004\tGT\t1/.\n16\t1565630\t.\tT\t<DUP>\t.\tPASS\tAnnotSV_ID=16_1565630_1571297_DUP_1;SV_start=1565630;Biologist_annotation=IFT140_tandem_duplication;Biologist_ranking=Pathogenic;Annotation_mode=full,split;CytoBand=p13.3;Gene_name=IFT140;Closest_left=TELO2;Closest_right=TMEM204;Gene_count=1;Tx=.,NM_014714;Tx_version=.,4;Tx_start=.,1560427;Tx_end=.,1662073;Overlapped_tx_length=.,5668;Overlapped_CDS_length=.,729;Overlapped_CDS_percent=.,16;Frameshift=.,no;Exon_count=.,31;Location=.,intron26-intron30;Location2=.,CDS;Dist_nearest_SS=.,488;Nearest_SS_type=.,3';Intersect_start=.,1565629;Intersect_end=.,1571297;P_gain_source=dbVar:nssv17973053;P_gain_coord=16:1568198-1570829;P_loss_source=dbVar:nssv16208781;P_loss_coord=16:1568218-1570809;po_P_gain_phen=CRANIOECTODERMAL_DYSPLASIA_5|Saldino-Mainzer_syndrome|Cranioectodermal_dysplasia|Joubert_syndrome_with_Jeune_asphyxiating_thoracic_dystrophy;po_P_gain_source=dbVar:nssv15158812|dbVar:nssv15148703|dbVar:nssv15147067|dbVar:nssv15148669|dbVar:nssv15147068|dbVar:nssv17649874|dbVar:nssv15152396|dbVar:nssv15150758|dbVar:nssv15149904|dbVar:nssv15154767|dbVar:nssv16254459|dbVar:nssv15149503|dbVar:nssv15150639|nssv15151292|dbVar:nssv15158813|dbVar:nssv15158224|dbVar:nssv15147425|dbVar:nssv15147959|dbVar:nssv15147069|dbVar:nssv15148094|dbVar:nssv15147790|dbVar:nssv8639650|dbVar:nssv15606077|dbVar:nssv18326373|dbVar:nssv15146792|dbVar:nssv15147071|dbVar:nssv15145754|dbVar:nssv15155466|dbVar:nssv17955877|dbVar:nssv18841986|CLN:513805;po_P_gain_coord=16:61452-90294632|16:69194-90274381|16:73142-11390552|16:78802-9169448|16:79942-2610461|16:84486-5251013|16:85881-11209288|16:85881-19806921|16:85881-22442007|16:85881-3216551|16:85881-5249457|16:85881-9883129|16:85882-90155062|16:88166-90163275|16:88166-90274695|16:93733-13420663|16:96767-11619372|16:96767-3264623|16:96767-4297186|16:97134-5122974|16:102840-28327676|16:109979-4316797|16:111044-6627459|16:716663-15836961|16:1271652-2283774|16:1328823-1969149|16:1505185-4415346|16:1561202-1573469|16:1565604-1571309|16:1565629-1571298;po_P_gain_percent=0.01|0.01|0.05|0.06|0.22|0.11|0.05|0.03|0.03|0.18|0.11|0.06|0.01|0.01|0.01|0.04|0.05|0.18|0.13|0.11|0.02|0.13|0.09|0.04|0.56|0.89|0.19|46.20|99.33|99.96;po_P_loss_phen=Cranioectodermal_dysplasia_5,_621180_(3)_AR|Retinitis_pigmentosa_80,_617781_(3)_AR|Short-rib_thoracic_dysplasia_9_with_or_without_polydactyly,_266920_(3)_AR|Polycystic_kidney_disease_9,_susceptibility_to,_621164_(3)_AD;po_P_loss_source=dbVar:nssv15173022|dbVar:nssv15145815|dbVar:nssv15147164|dbVar:nssv15155465|dbVar:nssv15776300|dbVar:nssv15146945|dbVar:nssv15148829|dbVar:nssv15148018|dbVar:nssv15145816|dbVar:nssv18790909|nssv18790910|dbVar:nssv15771714|dbVar:nssv16214818|dbVar:nssv18792796|dbVar:nssv16214651|morbid:IFT140;po_P_loss_coord=16:61452-1593645|16:73142-1762524|16:73142-1823350|16:85881-1875694|16:85881-2053328|16:88166-1715454|16:96723-1917328|16:96767-1594015|16:96767-2047583|16:256303-1657267|16:624056-2115656|16:624056-2148005|16:811897-2130379|16:1203719-2185710|16:1560428-1662073;po_P_loss_percent=0.37|0.34|0.32|0.32|0.29|0.35|0.31|0.38|0.29|0.40|0.38|0.37|0.43|0.58|5.58;P_snvindel_nb=14;P_snvindel_phen=Jeune_thoracic_dystrophy|Retinal_dystrophy|Retinitis_pigmentosa|Retinitis_pigmentosa_80|Saldino-Mainzer_syndrome;GC_content_left=0.52;GC_content_right=0.5;Repeat_coord_left=16:1565418-1565697|16:1565698-1565893;Repeat_type_left=AluJr|L1MEf;Repeat_coord_right=16:1571134-1571365;Repeat_type_right=AluJb;HI=.,30;DDD_HI_percent=69.24;ExAC_delZ=-1.52736818830718;ExAC_dupZ=-0.448946429663129;ExAC_cnvZ=-0.844654865976432;ExAC_synZ=-0.922111894578121;ExAC_misZ=-1.23259677674915;GenCC_disease=.,IFT140-related_recessive_ciliopathy|Jeune_syndrome|Leber_congenital_amaurosis|autosomal_dominant_polycystic_kidney_disease|retinitis_pigmentosa|retinitis_pigmentosa_80|short-rib_thoracic_dysplasia_9_with_or_without_polydactyly;GenCC_moi=.,AD|AR;GenCC_classification=.,Definitive|Strong|Supportive;GenCC_pmid=.,154653|22503633|22503633[PMID]|22503633[PMID]_23418020[PMID]_24009529[PMID]|23418020|24009529|26216056|26216056[PMID]|26968735|30479745|31034313;NCBI_gene_ID=.,9742;HGNC_gene_ID=.,HGNC:29077;OMIM_ID=614620;OMIM_phenotype=.,Cranioectodermal_dysplasia_5,_621180_(3)_AR|Retinitis_pigmentosa_80,_617781_(3)_AR|Short-rib_thoracic_dysplasia_9_with_or_without_polydactyly,_266920_(3)_AR|(Polycystic_kidney_disease_9,_susceptibility_to),_621164_(3)_AD;OMIM_inheritance=.,AD|AR;OMIM_morbid=yes;OMIM_morbid_candidate=yes;LOEUF_bin=4;GnomAD_pLI=9.914e-24;ExAC_pLI=9.1377e-18;AnnotSV_ranking_score=1;AnnotSV_ranking_criteria=1A_(cf_Gene_count,_RE_gene,_+0.00)|2A_(cf_P_gain_source,_+1.00)|2I-3_(IFT140,_+0.00)|3A_(1_gene,_+0.00)|5F_(+0.00);ACMG_class=5,full=5;END=1571297;SVLEN=5668\tGT\t1/.\n16\t31955077\t.\tC\t<DUP>\t.\tPASS\tAnnotSV_ID=16_31955077_34702366_DUP_1;SV_start=31955077;Biologist_ranking=Benign;Annotation_mode=full,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split;CytoBand=p11.2-p11.1,p11.2,p11.2,p11.2,p11.2,p11.2,p11.2,p11.2,p11.2,p11.2,p11.2,p11.2,p11.2,p11.2,p11.2,p11.2,p11.2,p11.2,p11.2-p11.1;Gene_name=LOC102723753|HERC2P4|TP53TG3D|LOC390705|LOC107987382|TP53TG3|SLC6A10P|TP53TG3C|LOC105369266|TP53TG3B|LOC107987386|ENPP7P13|MIR9901|CCNYL3|UBE2MP1|LOC112268173|LOC105371200|LINC01566,LOC102723753,HERC2P4,TP53TG3D,LOC390705,LOC107987382,TP53TG3,SLC6A10P,TP53TG3C,LOC105369266,TP53TG3B,LOC107987386,ENPP7P13,MIR9901,CCNYL3,UBE2MP1,LOC112268173,LOC105371200,LINC01566;Closest_left=ZNF267;Closest_right=FRG2DP;Gene_count=18;Tx=.,NR_135178,NR_109773,NM_001243722,NR_033866,NR_171659,NM_016212,NR_003083,NM_001205259,NR_158162,NM_001099687,NR_171660,NR_130771,NR_162093,NR_158158,NR_002837,NR_157261,NR_188627,NR_027080;Tx_version=.,1,1,3,1,1,5,3,3,1,4,1,1,1,1,1,1,1,2;Tx_start=.,32163432,32181363,32264606,32300867,32611681,32684850,32888793,33205546,33215160,33262081,33298270,33571843,33966044,34264719,34403801,34430129,34442319,34597786;Tx_end=.,32199434,32199434,32267249,32301302,32626892,32687486,32896463,33208179,33232409,33264719,33319296,33586742,33966140,34294699,34404762,34431919,34479081,34626084;Overlapped_tx_length=.,36002,18071,2643,435,15211,2636,7670,2633,17249,2638,21026,14899,96,29980,961,1790,36762,28298;Overlapped_CDS_length=.,0,0,375,0,0,375,0,375,0,375,0,0,0,0,0,0,0,0;Overlapped_CDS_percent=.,0,0,100,0,0,100,0,100,0,100,0,0,0,0,0,0,0,0;Frameshift=.,.,.,no,.,.,no,.,no,.,no,.,.,.,.,.,.,.,.;Exon_count=.,25,14,2,1,8,2,9,2,6,2,5,3,1,11,1,1,4,7;Location=.,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd;Location2=.,UTR,UTR,5'UTR-3'UTR,UTR,UTR,5'UTR-3'UTR,UTR,5'UTR-3'UTR,UTR,5'UTR-3'UTR,UTR,UTR,UTR,UTR,UTR,UTR,UTR,UTR;Intersect_start=.,32163432,32181363,32264606,32300867,32611681,32684850,32888793,33205546,33215160,33262081,33298270,33571843,33966044,34264719,34403801,34430129,34442319,34597786;Intersect_end=.,32199434,32199434,32267249,32301302,32626892,32687486,32896463,33208179,33232409,33264719,33319296,33586742,33966140,34294699,34404762,34431919,34479081,34626084;po_P_gain_source=dbVar:nssv15158812|dbVar:nssv15148703|dbVar:nssv15150639|nssv15151292|dbVar:nssv15158813|dbVar:nssv15158224|dbVar:nssv16216874|dbVar:nssv15126545|dbVar:nssv15133058|dbVar:nssv15126469|dbVar:nssv15150356;po_P_gain_coord=16:61452-90294632|16:69194-90274381|16:85882-90155062|16:88166-90163275|16:88166-90274695|16:5805002-34230001|16:24381954-33923059|16:30703234-35147508|16:31986099-90294753|16:34197493-64509054;po_P_gain_percent=3.04|3.05|3.05|3.05|3.05|8.00|20.63|61.82|4.66|1.67;po_P_loss_source=dbVar:nssv15141243;po_P_loss_coord=16:28826163-34375007;po_P_loss_percent=43.61;B_gain_source=.,DDD:47058|DDD:47062|DDD:47063|dgv50e203,DDD:47058|DDD:47062|DDD:47063|dgv50e203,DDD:47058|DDD:47062|DDD:47063|dgv50e203|esv2421440,DDD:47058|DDD:47062|DDD:47063|dgv50e203|esv2421440,1000g|DDD:47058|DDD:47062|DDD:47063|DDD:47091|IMH|dgv507e214|dgv50e203|dgv821e212|esv2421440,DDD:47058|DDD:47062|DDD:47063|IMH|dgv50e203|dgv821e212|esv2421440,DDD:47058|DDD:47062|DDD:47063|IMH|dgv50e203|dgv821e212,DDD:47058|DDD:47062|DDD:47113|IMH|dgv50e203|dgv821e212,DDD:47058|DDD:47062|DDD:47113|IMH|dgv50e203|dgv821e212,DDD:47058|DDD:47062|DDD:47113|DDD:47114|IMH|dgv50e203|dgv821e212,DDD:47058|DDD:47062|DDD:47113|DDD:47114|DDD:47116|IMH|dgv50e203|dgv821e212,DDD:47058|DDD:47062|DDD:47114|DDD:47116|DDD:47126|DDD:47131|DDD:47136|dgv50e203|dgv821e212|nsv514803,dgv50e203,TS40:ISCA-37481|dgv51e203|nsv516385,TS40:ISCA-37481|dgv51e203|nsv516385,TS40:ISCA-37481|dgv117e55|dgv51e203|nsv516385,TS40:ISCA-37481|dgv117e55|dgv2962n100|dgv51e203|nsv516385,1000g|DDD:47173|DDD:47179|DDD:47183|TS40:ISCA-37481|dgv117e55|dgv2962n100|dgv51e203|dgv824e212|esv2421698|esv3638500|gnomAD-SV_v2.1_DUP_16_42078|gnomAD-SV_v2.1_DUP_16_42081|nsv514804|nsv516385;B_gain_coord=.,16:31749454-34012168|16:32055083-33851279|16:32123333-33664028|16:32129166-32904510,16:31749454-34012168|16:32055083-33851279|16:32123333-33664028|16:32129166-32904510,16:31749454-34012168|16:32055083-33851279|16:32123333-33664028|16:32129166-32904510|16:32257510-32714406,16:31749454-34012168|16:32055083-33851279|16:32123333-33664028|16:32129166-32904510|16:32257510-32714406,16:31749454-34012168|16:32055083-33851279|16:32123333-33664028|16:32129166-32904510|16:32257510-32714406|16:32345385-33344188|16:32511180-33912324|16:32589803-32684945|16:32611030-32642738|16:32611030-32642738|16:32611030-32642738,16:31749454-34012168|16:32055083-33851279|16:32123333-33664028|16:32129166-32904510|16:32257510-32714406|16:32345385-33344188|16:32511180-33912324,16:31749454-34012168|16:32055083-33851279|16:32123333-33664028|16:32129166-32904510|16:32345385-33344188|16:32511180-33912324,16:31749454-34012168|16:32055083-33851279|16:32123333-33664028|16:32345385-33344188|16:32511180-33912324|16:33204449-33378738,16:31749454-34012168|16:32055083-33851279|16:32123333-33664028|16:32345385-33344188|16:32511180-33912324|16:33204449-33378738,16:31749454-34012168|16:32055083-33851279|16:32123333-33664028|16:32345385-33344188|16:32511180-33912324|16:33204449-33378738|16:33230271-33739925,16:31749454-34012168|16:32055083-33851279|16:32123333-33664028|16:32345385-33344188|16:32511180-33912324|16:33204449-33378738|16:33230271-33739925|16:33270420-33827235,16:31749454-34012168|16:32055083-33851279|16:32123333-33664028|16:32511180-33912324|16:33230271-33739925|16:33270420-33827235|16:33302092-33630727|16:33473790-33628580|16:33526621-33659628|16:33560604-33662009,16:31749454-34012168,16:34197352-35283226|16:34202089-35147508|16:34259806-34805859,16:34197352-35283226|16:34202089-35147508|16:34259806-34805859,16:34197352-35283226|16:34202089-35147508|16:34259806-34805859|16:34410570-34796531,16:34197352-35283226|16:34202089-35147508|16:34259806-34805859|16:34410570-34796531|16:34441796-34784591,16:34197352-35283226|16:34202089-35147508|16:34259806-34805859|16:34410570-34796531|16:34441796-34784591|16:34445084-34774280|16:34456525-34736855|16:34457086-34712399|16:34457086-34712399|16:34465000-34757000|16:34470705-34757071|16:34471852-34731191|16:34476781-34747070|16:34567146-34656231|16:34572795-34661165;B_gain_AFmax=.,0.1314,0.1314,0.1314,0.1314,0.8086,0.3314,0.3314,0.3314,0.3314,0.3314,0.515,0.515,0.07,0.06,0.06,0.09,0.09,0.1875;B_loss_source=.,DDD:47057|DDD:47058|DDD:47062|DDD:47063|dgv50e203,DDD:47057|DDD:47058|DDD:47062|DDD:47063|dgv50e203,DDD:47057|DDD:47058|DDD:47062|DDD:47063|dgv50e203|esv2421440,DDD:47057|DDD:47058|DDD:47062|DDD:47063|DDD:47074|dgv50e203|esv2421440,DDD:47058|DDD:47062|DDD:47063|DDD:47074|DDD:47081|DDD:47087|DDD:47091|DDD:47092|dbVar|dgv50e203|dgv819e212|esv2421440,DDD:47058|DDD:47062|DDD:47063|DDD:47074|HI40:ISCA-46492|dbVar|dgv50e203|dgv819e212|esv2421440,DDD:47058|DDD:47062|DDD:47063|dgv50e203,DDD:47058|DDD:47062|DDD:47113|dgv50e203,DDD:47058|DDD:47062|DDD:47113|dgv50e203,DDD:47058|DDD:47062|DDD:47113|DDD:47114|dgv50e203,DDD:47058|DDD:47062|DDD:47113|DDD:47114|dgv50e203,DDD:47058|DDD:47062|DDD:47114|DDD:47126|dgv50e203,dgv50e203,HI40:ISCA-37481|dbVar,HI40:ISCA-37481|dbVar,HI40:ISCA-37481|dbVar,HI40:ISCA-37481,HI40:ISCA-37481|dbVar;B_loss_coord=.,16:31749454-34012168|16:32052946-32496748|16:32055083-33851279|16:32123333-33664028|16:32129166-32904510,16:31749454-34012168|16:32052946-32496748|16:32055083-33851279|16:32123333-33664028|16:32129166-32904510,16:31749454-34012168|16:32052946-32496748|16:32055083-33851279|16:32123333-33664028|16:32129166-32904510|16:32257510-32714406,16:31749454-34012168|16:32052946-32496748|16:32055083-33851279|16:32123333-33664028|16:32129166-32904510|16:32257510-32714406|16:32298051-32812316,16:31749454-34012168|16:32055083-33851279|16:32123333-33664028|16:32129166-32904510|16:32257510-32714406|16:32298051-32812316|16:32485788-32648832|16:32511180-32878155|16:32541493-32648861|16:32589803-32684945|16:32590685-32653097|chr16:32611029-32642738,16:31749454-34012168|16:32055083-33851279|16:32123333-33664028|16:32129166-32904510|16:32257510-32714406|16:32298051-32812316|16:32511180-32878155|16:32656000-32802000|chr16:32656000-32802000,16:31749454-34012168|16:32055083-33851279|16:32123333-33664028|16:32129166-32904510,16:31749454-34012168|16:32055083-33851279|16:32123333-33664028|16:33204449-33378738,16:31749454-34012168|16:32055083-33851279|16:32123333-33664028|16:33204449-33378738,16:31749454-34012168|16:32055083-33851279|16:32123333-33664028|16:33204449-33378738|16:33230271-33739925,16:31749454-34012168|16:32055083-33851279|16:32123333-33664028|16:33204449-33378738|16:33230271-33739925,16:31749454-34012168|16:32055083-33851279|16:32123333-33664028|16:33230271-33739925|16:33473790-33628580,16:31749454-34012168,chr16:34197000-34310700|chr16:34197000-34434000|16:34202089-35147508,chr16:34197000-34434000|16:34202089-35147508,chr16:34197000-34434000|16:34202089-35147508,16:34202089-35147508,16:34202089-35147508|chr16:34457085-34712399;B_loss_AFmax=.,0.1692,0.1692,0.23,0.23,0.23,0.23,0.1692,0.0715,0.0715,0.1243,0.1243,0.1243,0.05,0.01,0.01,0.01,.,0.01;B_inv_source=IMH;B_inv_coord=16:24121264-80276578|16:29238285-88227116,16:24121264-80276578|16:29238285-88227116,16:24121264-80276578|16:29238285-88227116,16:24121264-80276578|16:29238285-88227116,16:24121264-80276578|16:29238285-88227116,16:24121264-80276578|16:29238285-88227116|16:32354183-33512427|16:32354247-33512560,16:24121264-80276578|16:29238285-88227116|16:32354183-33512427|16:32354247-33512560,16:24121264-80276578|16:29238285-88227116|16:32354183-33512427|16:32354247-33512560,16:24121264-80276578|16:29238285-88227116|16:32354183-33512427|16:32354247-33512560,16:24121264-80276578|16:29238285-88227116|16:32354183-33512427|16:32354247-33512560,16:24121264-80276578|16:29238285-88227116|16:32354183-33512427|16:32354247-33512560,16:24121264-80276578|16:29238285-88227116|16:32354183-33512427|16:32354247-33512560,16:24121264-80276578|16:29238285-88227116,16:24121264-80276578|16:29238285-88227116,16:24121264-80276578|16:29238285-88227116|16:34180655-46447887|16:34188883-46442460,16:24121264-80276578|16:29238285-88227116|16:34180655-46447887|16:34188883-46442460,16:24121264-80276578|16:29238285-88227116|16:34180655-46447887|16:34188883-46442460,16:24121264-80276578|16:29238285-88227116|16:34180655-46447887|16:34188883-46442460,16:24121264-80276578|16:29238285-88227116|16:34180655-46447887|16:34188883-46442460;B_inv_AFmax=0.4996;po_B_gain_someG_source=16:31985111-31985155_DDD:47053|16:32020000-32026200_gnomAD-SV_v2.1_DUP_16_42021|16:32020000-32096000_gnomAD-SV_v2.1_DUP_16_42022|16:32123333-33664028_DDD:47062|16:32193431-32193767_DDD:47069|16:32232000-32237100_gnomAD-SV_v2.1_DUP_16_42027|16:32328772-32370968_1000g|16:32328772-32370968_dgv504e214|16:32366482-32410672_1000g|16:32366482-32410672_dgv505e214|16:32418984-32469917_1000g|16:32454389-32457877_IMH|16:32486529-32486871_DDD:47082|16:32511180-33912324_dgv821e212|16:32611030-32642738_1000g|16:32611030-32642738_dgv507e214|16:32740800-32750700_gnomAD-SV_v2.1_DUP_16_42037|16:32831660-32863935_1000g|16:32831660-32863935_dgv508e214|16:32903492-32927819_1000g...;po_B_gain_someG_coord=16:31749454-34012168_dgv50e203|16:31989000-32033000_gnomAD-SV_v2.1_DUP_16_42016|16:32020000-32096000_TS40:ISCA-46491|16:32055083-33851279_DDD:47058|16:32129166-32904510_DDD:47063|16:32202950-32209100_gnomAD-SV_v2.1_DUP_16_42026|16:32257510-32714406_esv2421440|16:32328772-32370968_1000g|16:32345385-33344188_IMH|16:32366482-32410672_1000g|16:32418984-32469917_1000g|16:32418984-32469917_dgv506e214|16:32473116-32486576_DDD:47080|16:32489448-32622550_dgv4e224|16:32589803-32684945_DDD:47091|16:32611030-32642738_1000g|16:32684868-32688916_DDD:47098|16:32831660-32863935_1000g|16:32831660-32863935_1000g|16:32900256-32908555_nsv514802...;po_B_loss_someG_source=chr16:31933999-31991400_dbVar|chr16:31986799-32041500_dbVar|chr16:31998194-32020170_dbVar|chr16:32036000-32041500_dbVar|16:32055083-33851279_DDD:47058|16:32129166-32904510_DDD:47063|chr16:32289883-32289979_dbVar|16:32298051-32812316_DDD:47074|chr16:32328771-32370968_dbVar|chr16:32366481-32410672_dbVar|chr16:32393247-32393542_dbVar|chr16:32473466-32473664_dbVar|16:32485788-32648832_DDD:47081|16:32489448-32622550_dgv4e224|chr16:32494596-32496820_dbVar|chr16:32511665-32511727_dbVar|16:32524651-32525229_IMH|16:32532282-32533735_IMH|16:32562331-32601372_IMH|chr16:32586298-32586783_dbVar...;po_B_loss_someG_coord=16:31749454-34012168_dgv50e203|chr16:31971409-31971474_dbVar|chr16:31986800-31999150_dbVar|chr16:32010600-32020000_dbVar|16:32052946-32496748_DDD:47057|16:32123333-33664028_DDD:47062|16:32257510-32714406_esv2421440|chr16:32294372-32294452_dbVar|chr16:32312790-32313754_dbVar|16:32328772-32370968_1000g|chr16:32373626-32373758_dbVar|chr16:32418983-32469917_dbVar|chr16:32485126-32485204_dbVar|16:32486808-32486871_DDD:47084|chr16:32491490-32496732_dbVar|16:32511180-32878155_dgv819e212|16:32518848-32519371_IMH|16:32525918-32525974_IMH|16:32541493-32648861_DDD:47087|16:32562341-32600296_IMH...;GC_content_left=0.225;GC_content_right=0.335;Repeat_coord_left=16:31948879-31955047|16:31955090-31955836;Repeat_type_left=L1PA3|L1M4c;DDD_HI_percent=94.39,.,.,92.49,.,.,94.39,.,91.96,.,92.24,.,.,.,.,.,.,.,.;ExAC_synZ=1.56757328357025,.,.,1.56757328357025,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.;ExAC_misZ=2.11426077975333,.,.,2.11426077975333,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.;NCBI_gene_ID=.,.,100289574,729264,.,.,24150,386757,653550,.,729355,.,.,113218496,102724928,606551,.,.,283914;HGNC_gene_ID=.,.,HGNC:4872,HGNC:44657,.,.,HGNC:30759,HGNC:11043,HGNC:42962,.,HGNC:37202,.,.,HGNC:53993,HGNC:33206,HGNC:32195,.,.,HGNC:27555;LOEUF_bin=9,.,.,9,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.;GnomAD_pLI=0.0075995,.,.,0.0075995,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.;ExAC_pLI=0.64106,.,.,0.64106,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.;AnnotSV_ranking_score=0;AnnotSV_ranking_criteria=1A_(cf_Gene_count,_RE_gene,_+0.00)|2B_(cf_po_P_gain_source,_TS,_OMIM_morbid,_+0.00)|2G_(cf_po_B_gain_someG_source,_+0.00)|3A_(18_genes,_+0.00)|4O_(cf_po_B_gain_AllG_source,_B_gain_source,_po_B_gain_SomeG_source,_+0.00)|5F_(+0.00);ACMG_class=3,full=3,full=3,full=3,full=3,full=3,full=3,full=3,full=3,full=3,full=3,full=3,full=3,full=3,full=3,full=3,full=3,full=3,full=3;END=34702366;SVLEN=2747290\tGT\t1/.\n16\t32471626\t.\tC\t<DEL>\t.\tPASS\tAnnotSV_ID=16_32471626_33487672_DEL_1;SV_start=32471626;Biologist_ranking=Benign;Annotation_mode=full,split,split,split,split,split,split,split;CytoBand=p11.2;Gene_name=LOC107987382|TP53TG3|SLC6A10P|TP53TG3C|LOC105369266|TP53TG3B|LOC107987386,LOC107987382,TP53TG3,SLC6A10P,TP53TG3C,LOC105369266,TP53TG3B,LOC107987386;Closest_left=LOC390705;Closest_right=ENPP7P13;Gene_count=7;Tx=.,NR_171659,NM_016212,NR_003083,NM_001205259,NR_158162,NM_001099687,NR_171660;Tx_version=.,1,5,3,3,1,4,1;Tx_start=.,32611681,32684850,32888793,33205546,33215160,33262081,33298270;Tx_end=.,32626892,32687486,32896463,33208179,33232409,33264719,33319296;Overlapped_tx_length=.,15211,2636,7670,2633,17249,2638,21026;Overlapped_CDS_length=.,0,375,0,375,0,375,0;Overlapped_CDS_percent=.,0,100,0,100,0,100,0;Frameshift=.,.,no,.,no,.,no,.;Exon_count=.,8,2,9,2,6,2,5;Location=.,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd;Location2=.,UTR,5'UTR-3'UTR,UTR,5'UTR-3'UTR,UTR,5'UTR-3'UTR,UTR;Intersect_start=.,32611681,32684850,32888793,33205546,33215160,33262081,33298270;Intersect_end=.,32626892,32687486,32896463,33208179,33232409,33264719,33319296;po_P_gain_source=dbVar:nssv15158812|dbVar:nssv15148703|dbVar:nssv15150639|nssv15151292|dbVar:nssv15158813|dbVar:nssv15158224|dbVar:nssv16216874|dbVar:nssv15126545|dbVar:nssv15133058|dbVar:nssv15126469;po_P_gain_coord=16:61452-90294632|16:69194-90274381|16:85882-90155062|16:88166-90163275|16:88166-90274695|16:5805002-34230001|16:24381954-33923059|16:30703234-35147508|16:31986099-90294753;po_P_gain_percent=1.13|1.13|1.13|1.13|1.13|3.57|10.65|22.86|1.74;po_P_loss_source=dbVar:nssv15141243;po_P_loss_coord=16:28826163-34375007;po_P_loss_percent=18.31;B_gain_source=DDD:47058|DDD:47062|dgv50e203,1000g|DDD:47058|DDD:47062|DDD:47063|DDD:47091|IMH|dgv507e214|dgv50e203|dgv821e212|esv2421440,DDD:47058|DDD:47062|DDD:47063|IMH|dgv50e203|dgv821e212|esv2421440,DDD:47058|DDD:47062|DDD:47063|IMH|dgv50e203|dgv821e212,DDD:47058|DDD:47062|DDD:47113|IMH|dgv50e203|dgv821e212,DDD:47058|DDD:47062|DDD:47113|IMH|dgv50e203|dgv821e212,DDD:47058|DDD:47062|DDD:47113|DDD:47114|IMH|dgv50e203|dgv821e212,DDD:47058|DDD:47062|DDD:47113|DDD:47114|DDD:47116|IMH|dgv50e203|dgv821e212;B_gain_coord=16:31749454-34012168|16:32055083-33851279|16:32123333-33664028,16:31749454-34012168|16:32055083-33851279|16:32123333-33664028|16:32129166-32904510|16:32257510-32714406|16:32345385-33344188|16:32511180-33912324|16:32589803-32684945|16:32611030-32642738|16:32611030-32642738|16:32611030-32642738,16:31749454-34012168|16:32055083-33851279|16:32123333-33664028|16:32129166-32904510|16:32257510-32714406|16:32345385-33344188|16:32511180-33912324,16:31749454-34012168|16:32055083-33851279|16:32123333-33664028|16:32129166-32904510|16:32345385-33344188|16:32511180-33912324,16:31749454-34012168|16:32055083-33851279|16:32123333-33664028|16:32345385-33344188|16:32511180-33912324|16:33204449-33378738,16:31749454-34012168|16:32055083-33851279|16:32123333-33664028|16:32345385-33344188|16:32511180-33912324|16:33204449-33378738,16:31749454-34012168|16:32055083-33851279|16:32123333-33664028|16:32345385-33344188|16:32511180-33912324|16:33204449-33378738|16:33230271-33739925,16:31749454-34012168|16:32055083-33851279|16:32123333-33664028|16:32345385-33344188|16:32511180-33912324|16:33204449-33378738|16:33230271-33739925|16:33270420-33827235;B_gain_AFmax=0.07,0.8086,0.3314,0.3314,0.3314,0.3314,0.3314,0.515;B_loss_source=DDD:47058|DDD:47062|dgv50e203,DDD:47058|DDD:47062|DDD:47063|DDD:47074|DDD:47081|DDD:47087|DDD:47091|DDD:47092|dbVar|dgv50e203|dgv819e212|esv2421440,DDD:47058|DDD:47062|DDD:47063|DDD:47074|HI40:ISCA-46492|dbVar|dgv50e203|dgv819e212|esv2421440,DDD:47058|DDD:47062|DDD:47063|dgv50e203,DDD:47058|DDD:47062|DDD:47113|dgv50e203,DDD:47058|DDD:47062|DDD:47113|dgv50e203,DDD:47058|DDD:47062|DDD:47113|DDD:47114|dgv50e203,DDD:47058|DDD:47062|DDD:47113|DDD:47114|dgv50e203;B_loss_coord=16:31749454-34012168|16:32055083-33851279|16:32123333-33664028,16:31749454-34012168|16:32055083-33851279|16:32123333-33664028|16:32129166-32904510|16:32257510-32714406|16:32298051-32812316|16:32485788-32648832|16:32511180-32878155|16:32541493-32648861|16:32589803-32684945|16:32590685-32653097|chr16:32611029-32642738,16:31749454-34012168|16:32055083-33851279|16:32123333-33664028|16:32129166-32904510|16:32257510-32714406|16:32298051-32812316|16:32511180-32878155|16:32656000-32802000|chr16:32656000-32802000,16:31749454-34012168|16:32055083-33851279|16:32123333-33664028|16:32129166-32904510,16:31749454-34012168|16:32055083-33851279|16:32123333-33664028|16:33204449-33378738,16:31749454-34012168|16:32055083-33851279|16:32123333-33664028|16:33204449-33378738,16:31749454-34012168|16:32055083-33851279|16:32123333-33664028|16:33204449-33378738|16:33230271-33739925,16:31749454-34012168|16:32055083-33851279|16:32123333-33664028|16:33204449-33378738|16:33230271-33739925;B_loss_AFmax=0.0715,0.23,0.23,0.1692,0.0715,0.0715,0.1243,0.1243;B_inv_source=IMH;B_inv_coord=16:24121264-80276578|16:29238285-88227116|16:32354183-33512427|16:32354247-33512560;B_inv_AFmax=0.4996;po_B_gain_someG_source=16:32055083-33851279_DDD:47058|16:32129166-32904510_DDD:47063|16:32345385-33344188_IMH|16:32486529-32486871_DDD:47082|16:32511180-33912324_dgv821e212|16:32611030-32642738_1000g|16:32611030-32642738_dgv507e214|16:32740800-32750700_gnomAD-SV_v2.1_DUP_16_42037|16:32831660-32863935_1000g|16:32831660-32863935_dgv508e214|16:32903492-32927819_1000g|16:33204449-33378738_DDD:47113|16:33231300-33237300_gnomAD-SV_v2.1_DUP_16_42041|16:33286000-33293700_gnomAD-SV_v2.1_DUP_16_42046|16:33376004-33548487_DDD:47124|16:33446164-33480261_1000g|16:33446164-33480261_dgv510e214|16:33470756-33495606_1000g|16:33470756-33495606_dgv511e214|16:33484522-33543753_1000g...;po_B_gain_someG_coord=16:31749454-34012168_dgv50e203|16:32123333-33664028_DDD:47062|16:32257510-32714406_esv2421440|16:32473116-32486576_DDD:47080|16:32489448-32622550_dgv4e224|16:32589803-32684945_DDD:47091|16:32611030-32642738_1000g|16:32684868-32688916_DDD:47098|16:32831660-32863935_1000g|16:32831660-32863935_1000g|16:32900256-32908555_nsv514802|16:32903492-32927819_dgv509e214|16:33230271-33739925_DDD:47114|16:33270420-33827235_DDD:47116|16:33302092-33630727_nsv514803|16:33406659-33406773_IMH|16:33446164-33480261_1000g|16:33464249-33499453_DDD:47125|16:33470756-33495606_1000g|16:33473790-33628580_DDD:47126...;po_B_loss_someG_source=16:32052946-32496748_DDD:47057|16:32123333-33664028_DDD:47062|16:32257510-32714406_esv2421440|chr16:32473466-32473664_dbVar|16:32485788-32648832_DDD:47081|16:32489448-32622550_dgv4e224|chr16:32494596-32496820_dbVar|chr16:32511665-32511727_dbVar|16:32524651-32525229_IMH|16:32532282-32533735_IMH|16:32562331-32601372_IMH|chr16:32586298-32586783_dbVar|16:32588181-32590788_1000g|16:32589803-32684945_DDD:47091|chr16:32598581-32602963_dbVar|16:32598582-32602963_esv3638436|16:32600138-32601847_IMH|16:32600306-32601869_1000g|16:32600344-32601845_IMH|chr16:32611029-32642738_dbVar...;po_B_loss_someG_coord=16:31749454-34012168_dgv50e203|16:32055083-33851279_DDD:47058|16:32129166-32904510_DDD:47063|16:32298051-32812316_DDD:47074|chr16:32485126-32485204_dbVar|16:32486808-32486871_DDD:47084|chr16:32491490-32496732_dbVar|16:32511180-32878155_dgv819e212|16:32518848-32519371_IMH|16:32525918-32525974_IMH|16:32541493-32648861_DDD:47087|16:32562341-32600296_IMH|chr16:32588180-32590788_dbVar|16:32588181-32590788_esv3638433|16:32590685-32653097_DDD:47092|16:32598582-32602963_1000g|chr16:32598863-32598991_dbVar|chr16:32600305-32601869_dbVar|16:32600306-32601869_esv3638437|16:32600531-32601385_IMH...;GC_content_left=0.255;GC_content_right=0.275;Repeat_coord_left=16:32471562-32471589;Repeat_type_left=AT_rich;SegDup_left=16:32328196-32493021|16:32333061-32489849|16:32333061-32492391|16:32462184-32472474;SegDup_right=16:33363548-33517471|16:33465320-33517471|16:33466597-33509202;DDD_HI_percent=94.39,.,94.39,.,91.96,.,92.24,.;NCBI_gene_ID=.,.,24150,386757,653550,.,729355,.;HGNC_gene_ID=.,.,HGNC:30759,HGNC:11043,HGNC:42962,.,HGNC:37202,.;AnnotSV_ranking_score=-1;AnnotSV_ranking_criteria=1A_(cf_Gene_count,_RE_gene,_+0.00)|2F/4O_(cf_B_loss_source,_-1.00)|2B_(cf_po_P_loss_source,_HI,_OMIM_morbid,_+0.00|3A_(7_genes,_+0.00)|5F_(+0.00);ACMG_class=1,full=1,full=1,full=1,full=1,full=1,full=1,full=1;END=33487672;SVLEN=-1016047\tGT\t1/.\n16\t33371444\t.\tA\t<DUP>\t.\tPASS\tAnnotSV_ID=16_33371444_34285848_DUP_1;SV_start=33371444;Biologist_ranking=Benign;Annotation_mode=full,split,split,split;CytoBand=p11.2;Gene_name=ENPP7P13|MIR9901|CCNYL3,ENPP7P13,MIR9901,CCNYL3;Closest_left=LOC107987386;Closest_right=UBE2MP1;Gene_count=3;Tx=.,NR_130771,NR_162093,NR_158158;Tx_version=.,1,1,1;Tx_start=.,33571843,33966044,34264719;Tx_end=.,33586742,33966140,34294699;Overlapped_tx_length=.,14899,96,21129;Overlapped_CDS_length=.,0,0,0;Overlapped_CDS_percent=.,0,0,0;Exon_count=.,3,1,11;Location=.,txStart-txEnd,txStart-txEnd,txStart-intron9;Location2=.,UTR,UTR,UTR;Dist_nearest_SS=.,.,.,82;Nearest_SS_type=.,.,.,5';Intersect_start=.,33571843,33966044,34264719;Intersect_end=.,33586742,33966140,34285848;po_P_gain_source=dbVar:nssv15158812|dbVar:nssv15148703|dbVar:nssv15150639|nssv15151292|dbVar:nssv15158813|dbVar:nssv15158224|dbVar:nssv16216874|dbVar:nssv15126545|dbVar:nssv15133058|dbVar:nssv15126469|dbVar:nssv15150356;po_P_gain_coord=16:61452-90294632|16:69194-90274381|16:85882-90155062|16:88166-90163275|16:88166-90274695|16:5805002-34230001|16:24381954-33923059|16:30703234-35147508|16:31986099-90294753|16:34197493-64509054;po_P_gain_percent=1.01|1.01|1.02|1.02|1.01|3.02|5.78|20.57|1.57|0.29;po_P_loss_source=dbVar:nssv15141243;po_P_loss_coord=16:28826163-34375007;po_P_loss_percent=16.48;B_gain_source=.,DDD:47058|DDD:47062|DDD:47114|DDD:47116|DDD:47126|DDD:47131|DDD:47136|dgv50e203|dgv821e212|nsv514803,dgv50e203,TS40:ISCA-37481|dgv51e203|nsv516385;B_gain_coord=.,16:31749454-34012168|16:32055083-33851279|16:32123333-33664028|16:32511180-33912324|16:33230271-33739925|16:33270420-33827235|16:33302092-33630727|16:33473790-33628580|16:33526621-33659628|16:33560604-33662009,16:31749454-34012168,16:34197352-35283226|16:34202089-35147508|16:34259806-34805859;B_gain_AFmax=.,0.515,0.07,0.06;B_loss_source=.,DDD:47058|DDD:47062|DDD:47114|DDD:47126|dgv50e203,dgv50e203,HI40:ISCA-37481|dbVar;B_loss_coord=.,16:31749454-34012168|16:32055083-33851279|16:32123333-33664028|16:33230271-33739925|16:33473790-33628580,16:31749454-34012168,chr16:34197000-34310700|chr16:34197000-34434000|16:34202089-35147508;B_loss_AFmax=.,0.1243,0.05,0.01;B_inv_source=IMH;B_inv_coord=16:24121264-80276578|16:29238285-88227116,16:24121264-80276578|16:29238285-88227116,16:24121264-80276578|16:29238285-88227116,16:24121264-80276578|16:29238285-88227116|16:34180655-46447887|16:34188883-46442460;B_inv_AFmax=0.4996;po_B_gain_someG_source=16:32055083-33851279_DDD:47058|16:32511180-33912324_dgv821e212|16:33230271-33739925_DDD:47114|16:33302092-33630727_nsv514803|16:33406659-33406773_IMH|16:33446164-33480261_1000g|16:33464249-33499453_DDD:47125|16:33470756-33495606_1000g|16:33473790-33628580_DDD:47126|16:33484522-33543753_1000g|16:33524566-33570784_1000g|16:33524566-33570784_dgv513e214|16:33560604-33662009_DDD:47136|16:33588533-33626594_1000g|16:33588533-33626594_dgv514e214|16:33870630-33923125_esv3892830|16:33961733-33961778_DDD:47155|16:33983829-34200953_DDD:47158|16:34202089-35147508_TS40:ISCA-37481|;po_B_gain_someG_coord=16:31749454-34012168_dgv50e203|16:32123333-33664028_DDD:47062|16:33204449-33378738_DDD:47113|16:33270420-33827235_DDD:47116|16:33376004-33548487_DDD:47124|16:33446164-33480261_1000g|16:33446164-33480261_dgv510e214|16:33470756-33495606_1000g|16:33470756-33495606_dgv511e214|16:33484522-33543753_1000g|16:33484522-33543753_dgv512e214|16:33524566-33570784_1000g|16:33526621-33659628_DDD:47131|16:33582387-33629628_DDD:47138|16:33588533-33626594_1000g|16:33783303-33785890_DDD:47148|16:33879457-33912806_esv3892831|16:33961808-33964212_DDD:47156|16:34197352-35283226_dgv51e203|16:34259806-34805859_nsv516385;po_B_loss_someG_source=16:32055083-33851279_DDD:47058|16:33204449-33378738_DDD:47113|chr16:33429584-33429643_dbVar|16:33433594-33433957_gnomAD-SV_v2.1_DEL_16_153879|chr16:33462282-33462339_dbVar|16:33464249-33499453_DDD:47125|chr16:33470755-33495606_dbVar|16:33473790-33628580_DDD:47126|16:33486471-33490892_DDD:47128|chr16:33524565-33570784_dbVar|16:33537417-33539750_esv2656732|chr16:33545163-33547147_dbVar|chr16:33559201-33559298_dbVar|chr16:33560642-33560933_dbVar|16:33582387-33629628_DDD:47138|16:33586836-33590310_1000g|chr16:33588532-33626594_dbVar|16:33589117-33599697_1000g|chr16:33597522-33597696_dbVar|16:33604896-33605259_gnomAD-SV_v2.1_DEL_16_153891...;po_B_loss_someG_coord=16:31749454-34012168_dgv50e203|16:32123333-33664028_DDD:47062|16:33230271-33739925_DDD:47114|chr16:33433594-33433957_dbVar|chr16:33446163-33480261_dbVar|16:33462282-33462339_gnomAD-SV_v2.1_DEL_16_153880|chr16:33467950-33468051_dbVar|chr16:33472157-33472229_dbVar|chr16:33484521-33543753_dbVar|chr16:33509280-33509607_dbVar|chr16:33529598-33529692_dbVar|chr16:33543857-33545591_dbVar|chr16:33556576-33556850_dbVar|16:33559201-33559298_gnomAD-SV_v2.1_DEL_16_153886|chr16:33564729-33565655_dbVar|chr16:33586835-33590310_dbVar|16:33586836-33590310_esv3638472|chr16:33589116-33599697_dbVar|16:33589117-33599697_esv3638477|chr16:33604896-33605259_dbVar...;GC_content_left=0.43;GC_content_right=0.365;Repeat_coord_left=16:33371221-33371434;Repeat_type_left=AluSz6;SegDup_left=16:33241272-33372204|16:33325624-33372204|16:33330495-33372204|16:33330495-33372204|16:33342946-33372204|16:33353245-33373923|16:33355202-33372204|16:33363548-33517471;ENCODE_blacklist_left=16:32923001-33427100;ENCODE_blacklist_characteristics_left=High_Signal_Region;NCBI_gene_ID=.,.,113218496,102724928;HGNC_gene_ID=.,.,HGNC:53993,HGNC:33206;AnnotSV_ranking_score=0;AnnotSV_ranking_criteria=1A_(cf_Gene_count,_RE_gene,_+0.00)|2B_(cf_po_P_gain_source,_TS,_OMIM_morbid,_+0.00)|2G_(cf_po_B_gain_someG_source,_+0.00)|2L_(CCNYL3,_+0.00)|3A_(3_genes,_+0.00)|4O_(cf_po_B_gain_AllG_source,_B_gain_source,_po_B_gain_SomeG_source,_+0.00)|5F_(+0.00);ACMG_class=3,full=3,full=3,full=3;END=34285848;SVLEN=914405\tGT\t1/.\n16\t34493207\t.\tC\t<DUP>\t.\tPASS\tAnnotSV_ID=16_34493207_34702366_DUP_1;SV_start=34493207;Biologist_ranking=Benign;Annotation_mode=full,split;CytoBand=p11.2-p11.1;Gene_name=LINC01566;Closest_left=LOC105371200;Closest_right=FRG2DP;Gene_count=1;Tx=.,NR_027080;Tx_version=.,2;Tx_start=.,34597786;Tx_end=.,34626084;Overlapped_tx_length=.,28298;Overlapped_CDS_length=.,0;Overlapped_CDS_percent=.,0;Exon_count=.,7;Location=.,txStart-txEnd;Location2=.,UTR;Intersect_start=.,34597786;Intersect_end=.,34626084;po_P_gain_source=dbVar:nssv15158812|dbVar:nssv15148703|dbVar:nssv15150639|nssv15151292|dbVar:nssv15158813|dbVar:nssv15158224|dbVar:nssv15133058|dbVar:nssv15126469|dbVar:nssv15150356;po_P_gain_coord=16:61452-90294632|16:69194-90274381|16:85882-90155062|16:88166-90163275|16:88166-90274695|16:30703234-35147508|16:31986099-90294753|16:34197493-64509054;po_P_gain_percent=0.23|0.23|0.23|0.23|0.23|4.71|0.36|0.69;B_gain_source=1000g|DDD:47173|DDD:47179|TS40:ISCA-37481|dgv117e55|dgv2962n100|dgv51e203|dgv824e212|esv2421698|esv3638500|gnomAD-SV_v2.1_DUP_16_42078|nsv514804|nsv516385,1000g|DDD:47173|DDD:47179|DDD:47183|TS40:ISCA-37481|dgv117e55|dgv2962n100|dgv51e203|dgv824e212|esv2421698|esv3638500|gnomAD-SV_v2.1_DUP_16_42078|gnomAD-SV_v2.1_DUP_16_42081|nsv514804|nsv516385;B_gain_coord=16:34197352-35283226|16:34202089-35147508|16:34259806-34805859|16:34410570-34796531|16:34441796-34784591|16:34445084-34774280|16:34456525-34736855|16:34457086-34712399|16:34457086-34712399|16:34465000-34757000|16:34470705-34757071|16:34471852-34731191|16:34476781-34747070,16:34197352-35283226|16:34202089-35147508|16:34259806-34805859|16:34410570-34796531|16:34441796-34784591|16:34445084-34774280|16:34456525-34736855|16:34457086-34712399|16:34457086-34712399|16:34465000-34757000|16:34470705-34757071|16:34471852-34731191|16:34476781-34747070|16:34567146-34656231|16:34572795-34661165;B_gain_AFmax=0.1875;B_loss_source=HI40:ISCA-37481|dbVar;B_loss_coord=16:34202089-35147508|chr16:34457085-34712399;B_loss_AFmax=0.01;B_inv_source=IMH;B_inv_coord=16:24121264-80276578|16:29238285-88227116|16:34180655-46447887|16:34188883-46442460;B_inv_AFmax=0.4996;po_B_gain_someG_source=16:34202089-35147508_TS40:ISCA-37481|16:34410570-34796531_dgv117e55|16:34445084-34774280_dgv824e212|16:34457086-34712399_1000g|16:34465000-34757000_gnomAD-SV_v2.1_DUP_16_42078|16:34471852-34731191_nsv514804|16:34567146-34656231_DDD:47183|;po_B_gain_someG_coord=16:34197352-35283226_dgv51e203|16:34259806-34805859_nsv516385|16:34441796-34784591_dgv2962n100|16:34456525-34736855_DDD:47173|16:34457086-34712399_esv3638500|16:34470705-34757071_esv2421698|16:34476781-34747070_DDD:47179|16:34572795-34661165_gnomAD-SV_v2.1_DUP_16_42081;po_B_loss_someG_source=chr16:34457085-34712399_dbVar|chr16:34513700-34518239_dbVar|chr16:34521342-34521422_dbVar|chr16:34530127-34530478_dbVar|chr16:34539678-34540320_dbVar|chr16:34563433-34571562_dbVar|chr16:34590029-34590133_dbVar|chr16:34590961-34591436_dbVar|chr16:34604209-34604282_dbVar|chr16:34659877-34659999_dbVar|chr16:34666766-34667080_dbVar|chr16:34687510-34703789_dbVar;po_B_loss_someG_coord=16:34202089-35147508_HI40:ISCA-37481|chr16:34502223-34502386_dbVar|chr16:34515750-34515813_dbVar|chr16:34530038-34530588_dbVar|chr16:34539652-34540292_dbVar|16:34539693-34540322_DDD:47181|chr16:34568138-34568693_dbVar|chr16:34590565-34590648_dbVar|chr16:34600723-34610152_dbVar|chr16:34655648-34655724_dbVar|chr16:34664288-34664480_dbVar|chr16:34684662-34685228_dbVar;GC_content_left=0.385;GC_content_right=0.335;NCBI_gene_ID=.,283914;HGNC_gene_ID=.,HGNC:27555;AnnotSV_ranking_score=-1;AnnotSV_ranking_criteria=1A_(cf_Gene_count,_RE_gene,_+0.00)|2D_(cf_B_gain_source,_-1.00)|2B_(cf_po_P_gain_source,_TS,_OMIM_morbid,_+0.00)|3A_(1_gene,_+0.00)|4O_(cf_po_B_gain_AllG_source,_B_gain_source,_po_B_gain_SomeG_source,_+0.00)|5F_(+0.00);ACMG_class=1,full=1;END=34702366;SVLEN=209160\tGT\t1/.\n17\t14100119\t.\tT\t<DUP>\t.\tPASS\tAnnotSV_ID=17_14100119_15442066_DUP_1;SV_start=14100119;Biologist_annotation=PMP22_(CMT1A);Biologist_ranking=Pathogenic;Annotation_mode=full,split,split,split,split,split,split,split,split,split,split,split,split,split,split;CytoBand=p12;Gene_name=COX10|CDRT15|HS3ST3B1|MGC12916|CDRT7|LOC101928475|CDRT8|PMP22|MIR4731|TEKT3|CDRT4|TVP23C-CDRT4|CDRT3|TVP23C,COX10,CDRT15,HS3ST3B1,MGC12916,CDRT7,LOC101928475,CDRT8,PMP22,MIR4731,TEKT3,CDRT4,TVP23C-CDRT4,CDRT3,TVP23C;Closest_left=COX10-DT;Closest_right=FBXW10B;Gene_count=14;Tx=.,NM_001303,NM_001007530,NM_006041,NR_026880,NR_033371,NR_135638,NR_103559,NM_000304,NR_039884,NM_031898,NM_001204477,NM_001204478,NR_146601,NM_145301;Tx_version=.,4,3,3,1,1,1,1,4,1,3,2,2,1,3;Tx_start=.,13972820,14138989,14204397,14207056,14934291,14954671,15008301,15133095,15154943,15207128,15339331,15339331,15373624,15405577;Tx_end=.,14111994,14140179,14252721,14209062,14935274,14955593,15009504,15168643,15155013,15244914,15370935,15466797,15374150,15466797;Overlapped_tx_length=.,11876,1190,48324,2006,983,922,1203,35548,70,37786,31604,102735,526,36489;Overlapped_CDS_length=.,404,567,1173,0,0,0,0,483,0,1473,459,33,0,369;Overlapped_CDS_percent=.,30,100,100,0,0,0,0,100,0,100,100,6,0,44;Frameshift=.,yes,no,no,.,.,.,.,no,.,no,no,no,.,no;Exon_count=.,7,3,2,1,3,1,2,5,1,9,4,7,1,6;Location=.,intron6-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,intron5-txEnd,txStart-txEnd,intron5-txEnd;Location2=.,CDS-3'UTR,5'UTR-3'UTR,5'UTR-3'UTR,UTR,UTR,UTR,UTR,5'UTR-3'UTR,UTR,5'UTR-3'UTR,5'UTR-3'UTR,CDS-3'UTR,UTR,CDS-3'UTR;Dist_nearest_SS=.,4580,.,.,.,.,.,.,.,.,.,.,7032,.,7032;Nearest_SS_type=.,5',.,.,.,.,.,.,.,.,.,.,5',.,5';Intersect_start=.,14100118,14138989,14204397,14207056,14934291,14954671,15008301,15133095,15154943,15207128,15339331,15339331,15373624,15405577;Intersect_end=.,14111994,14140179,14252721,14209062,14935274,14955593,15009504,15168643,15155013,15244914,15370935,15442066,15374150,15442066;RE_gene=ABCG8_(morbid/RE=mTL_miRNA)|ACBD5_(morbid/RE=mTL_miRNA)|ACVRL1_(HI=3/morbid/RE=mTL_miRNA)|AMH_(morbid/RE=mTL_miRNA)|ANKS6_(morbid/RE=mTL_miRNA)|ATL3_(morbid/RE=mTL_miRNA)|ATP9A_(morbid/RE=mTL_miRNA)|CABP4_(morbid/RE=mTL_miRNA)|CACNA1C_(morbid/RE=mTL_miRNA)|CACNA2D1_(morbid/RE=mTL_miRNA)|CAVIN1_(morbid/RE=mTL_miRNA)|CD4_(morbid/RE=mTL_miRNA)|CDT1_(morbid/RE=mTL_miRNA)|CEP104_(morbid/RE=mTL_miRNA)|CHD7_(HI=3/morbid/RE=mTL_miRNA)|CHEK1_(morbid/RE=mTL_miRNA)|CHST6_(morbid/RE=mTL_miRNA)|CISD2_(morbid/RE=mTL_miRNA)|CPT1A_(morbid/RE=mTL_miRNA)|CREB1_(morbid/RE=mTL_miRNA)|CRIPT_(morbid/RE=mTL_miRNA)|CYB5A_(morbid/RE=mTL_miRNA)|CYCS_(morbid/RE=mTL_miRNA)|DNAJB13_(morbid/RE=mTL_miRNA)|DNAJB4_(morbid/RE=mTL_miRNA)|DNAL1_(morbid/RE=mTL_miRNA)|DPP9_(morbid/RE=mTL_miRNA)|EIF2B2_(morbid/RE=mTL_miRNA)|ELAC2_(morbid/RE=ABC_enhancer)|EMC1_(morbid/RE=mTL_miRNA)|FANCA_(morbid/RE=mTL_miRNA)|GAN_(morbid/RE=mTL_miRNA)|GATAD2B_(HI=3/morbid/RE=mTL_miRNA)|GNB5_(morbid/RE=mTL_miRNA)|GOLGA2_(morbid/RE=mTL_miRNA)|GPRC5B_(morbid/RE=mTL_miRNA)|HCFC1_(morbid/RE=mTL_miRNA)|HCN4_(morbid/RE=mTL_miRNA)|HFE_(morbid/RE=mTL_miRNA)|IKBKG_(HI=3/morbid/RE=mTL_miRNA)|IRAK4_(morbid/RE=mTL_miRNA)|ISCA2_(morbid/RE=mTL_miRNA)|KCND3_(morbid/RE=mTL_miRNA)|KCNH2_(HI=3/morbid/RE=mTL_miRNA)|KDM6B_(HI=3/morbid/RE=mTL_miRNA)|KIAA1549_(morbid/RE=mTL_miRNA)|LDHD_(morbid/RE=mTL_miRNA)|LIAS_(morbid/RE=mTL_miRNA)|LNPK_(morbid/RE=mTL_miRNA)|LRTOMT_(morbid/RE=mTL_miRNA)...;P_gain_source=dbVar:nssv15123319|nssv18792872|dbVar:nssv15123460|dbVar:nssv15124534|dbVar:nssv15130870|dbVar:nssv15132574|nssv15139980|nssv16091758|dbVar:nssv15143888|dbVar:nssv15144711|dbVar:nssv15605910|dbVar:nssv15770494|dbVar:nssv15770609|dbVar:nssv15770794|dbVar:nssv16216948|dbVar:nssv17171394|dbVar:nssv17171395|dbVar:nssv17171396|dbVar:nssv17517518|dbVar:nssv17968761|dbVar:nssv17971796|dbVar:nssv18788963,.,.,.,.,.,.,.,dbVar:nssv15130870|dbVar:nssv15770494|dbVar:nssv15770609|dbVar:nssv15770794|dbVar:nssv17171395|dbVar:nssv17171396|dbVar:nssv17517518|dbVar:nssv17971796|dbVar:nssv18788963,.,.,.,.,.,.;P_gain_coord=17:14104013-15422557|17:14111773-15442066|17:14139890-15406546|17:14413313-15169915|17:15036413-15036413|17:15132095-15169674|17:15133085-15164054|17:15133095-15164078|17:15133097-15165152|17:15133098-15164054|17:15133961-15169915|17:15134215-15162530|17:15134215-15164064|17:15134229-15164050|17:15134234-15164044|17:15134235-15164044|17:15142769-15164064|17:15142779-15164054|17:15162412-15406546,.,.,.,.,.,.,.,17:15133097-15165152|17:15133098-15164054|17:15134215-15162530|17:15134215-15164064|17:15134229-15164050|17:15134234-15164044|17:15134235-15164044|17:15142769-15164064|17:15142779-15164054,.,.,.,.,.,.;P_loss_phen=?Neuropathy,_inflammatory_demyelinating,_139393_(3)_?AD|Charcot-Marie-Tooth_disease,_type_1A,_118220_(3)_AD|Charcot-Marie-Tooth_disease,_type_1E,_118300_(3)_AD|Dejerine-Sottas_disease,_145900_(3)_AD,AR|Neuropathy,_recurrent,_with_pressure_palsies,_162500_(3)_AD|Roussy-Levy_syndrome,_180800_(3)_AD|Spermatogenic_failure_81,_620277_(3)_AR,.,.,.,.,.,.,.,?Neuropathy,_inflammatory_demyelinating,_139393_(3)_?AD|Charcot-Marie-Tooth_disease,_type_1A,_118220_(3)_AD|Charcot-Marie-Tooth_disease,_type_1E,_118300_(3)_AD|Dejerine-Sottas_disease,_145900_(3)_AD,AR|Neuropathy,_recurrent,_with_pressure_palsies,_162500_(3)_AD|Roussy-Levy_syndrome,_180800_(3)_AD,.,Spermatogenic_failure_81,_620277_(3)_AR,.,.,.,.;P_loss_source=HI3:PMP22|dbVar:nssv15119700|nssv15120161|dbVar:nssv15123358|dbVar:nssv15124100|dbVar:nssv15124536|dbVar:nssv15130148|nssv15131578|dbVar:nssv15131641|dbVar:nssv15132056|dbVar:nssv15133540|dbVar:nssv15152434|dbVar:nssv15605873|dbVar:nssv15770639|dbVar:nssv16212046|dbVar:nssv16213644|dbVar:nssv17171685|dbVar:nssv17171686|dbVar:nssv17171687|dbVar:nssv17517519|dbVar:nssv17968760|dbVar:nssv17971249|dbVar:nssv17971279|dbVar:nssv17972656|dbVar:nssv17974454|dbVar:nssv17974892|dbVar:nssv18788962|morbid:PMP22|morbid:TEKT3,dbVar:nssv15124536,.,.,.,.,.,.,HI3:PMP22|dbVar:nssv15119700|nssv15120161|dbVar:nssv15131641|dbVar:nssv15133540|dbVar:nssv15770639|dbVar:nssv16212046|dbVar:nssv17171685|dbVar:nssv17171686|dbVar:nssv17171687|dbVar:nssv17517519|dbVar:nssv17968760|dbVar:nssv17971279|dbVar:nssv17974892|dbVar:nssv18788962|morbid:PMP22,.,morbid:TEKT3,.,.,.,.;P_loss_coord=17:14110044-14111913|17:14111773-15442066|17:14128551-15422557|17:14139890-15142928|17:14215740-15422582|17:14763747-15242181|17:15133085-15134407|17:15133085-15142938|17:15133085-15164054|17:15133095-15164078|17:15133097-15168643|17:15133098-15164054|17:15133961-15169915|17:15134215-15164064|17:15134234-15164044|17:15134235-15164044|17:15138536-15168643|17:15142769-15142948|17:15142779-15142938|17:15142779-15164054|17:15142930-15164044|17:15152792-15162532|17:15162392-15164044|17:15162402-15162520|17:15162402-15162523|17:15162402-15164054|17:15207129-15244914,17:14110044-14111913,.,.,.,.,.,.,17:15133097-15168643|17:15133098-15164054|17:15134215-15164064|17:15134234-15164044|17:15134235-15164044|17:15138536-15168643|17:15142769-15142948|17:15142779-15142938|17:15142779-15164054|17:15142930-15164044|17:15152792-15162532|17:15162392-15164044|17:15162402-15162520|17:15162402-15162523|17:15162402-15164054,.,17:15207129-15244914,.,.,.,.;po_P_gain_phen=17p12_recurrent_(HNPP/CMT1A)_region_(includes_PMP22);po_P_gain_source=dbVar:nssv15148946|dbVar:nssv15150353|dbVar:nssv15149908|nssv15152170|dbVar:nssv15159024|dbVar:nssv15160732|dbVar:nssv15159027|dbVar:nssv15121114|dbVar:nssv17976715|dbVar:nssv15133502|dbVar:nssv15605908|dbVar:nssv17955950|dbVar:nssv18330199|dbVar:nssv15127850|dbVar:nssv15155527|dbVar:nssv18330563|dbVar:nssv16215327|dbVar:nssv15152221|dbVar:nssv15155528|dbVar:nssv15152212|dbVar:nssv15151828|dbVar:nssv15138362|dbVar:nssv18330766|dbVar:nssv15152433|dbVar:nssv15141972|dbVar:nssv15137438|dbVar:nssv15138198|dbVar:nssv15151261|dbVar:nssv15152245|dbVar:nssv15139258|nssv15130449|dbVar:nssv18329572|dbVar:nssv18330190|dbVar:nssv18330250|dbVar:nssv18329615|dbVar:nssv15133504|dbVar:nssv15138548|dbVar:nssv15133503|dbVar:nssv17976450|dbVar:nssv18842067|dbVar:nssv18792739|dbVar:nssv18792799|dbVar:nssv17955866|TS3:ISCA-37436|dbVar:nssv17649964|dbVar:nssv15123339|dbVar:nssv15141042|dbVar:nssv15122626|dbVar:nssv16867389|dbVar:nssv15140957|dbVar:nssv15141757|dbVar:nssv15123522|dbVar:nssv15159072|dbVar:nssv15605912|dbVar:nssv15137903|dbVar:nssv15123444|dbVar:nssv16207305|dbVar:nssv15136705|dbVar:nssv15134920|dbVar:nssv15132415|dbVar:nssv15133505;po_P_gain_coord=17:526-14667519|17:526-15027737|17:527-81041938|17:7215-81058310|17:8548-81060040|17:12345-81057996|17:10795577-17867596|17:11819315-17795978|17:14029614-15562901|17:14063252-15449627|17:14073285-15442296|17:14073564-15479923|17:14073604-15482773|17:14076431-15491532|17:14078284-15479940|17:14079631-15370444|17:14083055-15463054|17:14083055-15479940|17:14083055-15491532|17:14083055-15491533|17:14083055-15567669|17:14083056-15483608|17:14085653-15512120|17:14087934-15437330|17:14087934-15484358|17:14087934-15484858|17:14087934-15490100|17:14087934-15491532|17:14087934-15500645|17:14087935-15479940|17:14087935-15483608|17:14087935-15484358|17:14087935-15484630|17:14090301-15467184|17:14090301-15473590|17:14090301-15482240|17:14093319-15476314|17:14095257-15492591|17:14095307-15466762|17:14095307-15472344|17:14096090-15492591|17:14097916-15422952|17:14098197-15442500|17:14098278-15471179|17:14098661-15501133|17:14099743-15471179|17:14100119-15455297|17:14100119-15458649|17:14100119-15492400|17:14100119-15492444|17:14101030-15504740|17:14105875-15611546|17:14111773-15482872|17:14139858-15707850|17:14195643-15545880|17:15093601-15856310|17:15113718-18184130|17:15138003-20524013|17:15162482-20828612;po_P_gain_percent=3.87|6.17|1.66|1.66|1.66|1.66|18.98|22.45|87.52|96.80|98.02|95.42|95.23|94.83|95.74|98.41|97.24|96.07|95.28|95.28|90.39|95.82|94.07|99.10|96.10|96.06|95.71|95.61|94.99|96.40|96.15|96.10|96.08|97.46|97.01|96.41|97.03|96.04|97.85|97.45|96.09|99.83|99.82|97.75|95.68|97.85|99.02|98.78|96.38|96.38|95.54|88.74|97.02|83.05|92.31|45.69|10.69|5.65|4.93;po_P_loss_phen=17p12_recurrent_(HNPP/CMT1A)_region_(includes_PMP22)|Mitochondrial_complex_IV_deficiency,_nuclear_type_3,_619046_(3)_AR;po_P_loss_source=morbid:COX10|dbVar:nssv15129689|dbVar:nssv17976967|dbVar:nssv18330114|dbVar:nssv15145216|dbVar:nssv18330761|dbVar:nssv15138335|dbVar:nssv18330252|dbVar:nssv15145035|dbVar:nssv15141682|dbVar:nssv15141099|dbVar:nssv15138794|dbVar:nssv18330872|dbVar:nssv15137498|nssv15155529|dbVar:nssv15137504|dbVar:nssv18330269|dbVar:nssv18842062|dbVar:nssv15141647|HI3:ISCA-37436|dbVar:nssv18330706|dbVar:nssv15150275|dbVar:nssv15129116|dbVar:nssv15123772|dbVar:nssv15141918|dbVar:nssv15159071|nssv15605909|dbVar:nssv15123331|dbVar:nssv15605911|dbVar:nssv18786371|dbVar:nssv15605913|dbVar:nssv16255829|dbVar:nssv15136096|dbVar:nssv15136245|dbVar:nssv15126994|dbVar:nssv15134560|dbVar:nssv15137984;po_P_loss_coord=17:13972821-14111994|17:14073604-15482773|17:14076990-15473312|17:14077820-15491532|17:14082226-15421861|17:14082946-15484858|17:14083055-15475087|17:14083056-15484859|17:14086859-15476561|17:14087788-15473312|17:14087788-15483608|17:14087788-15490100|17:14087789-15484858|17:14087934-15484858|17:14087934-15491532|17:14087935-15491532|17:14095257-15477547|17:14095640-15274712|17:14097916-15422952|17:14098248-15475654|17:14098661-15500645|17:14098787-15495266|17:14099743-15471179|17:14100119-15455238|17:14101030-15449627|17:14101030-15482817|17:14104013-15551814|17:14110128-15472344|17:14110452-15449097|17:14111755-15442178|17:14111773-15482872|17:14111773-15491748|17:14112032-15482773|17:14574436-15856310|17:14970117-17375771;po_P_loss_percent=8.53|95.23|96.11|94.92|98.66|95.72|96.40|95.73|96.56|96.85|96.14|95.70|96.05|96.06|95.61|95.61|97.08|99.62|99.83|97.43|95.72|96.10|97.85|99.03|99.44|97.05|92.42|97.78|99.47|99.99|97.02|96.40|97.03|67.68|19.62;P_snvindel_nb=60,1,.,.,.,.,.,.,59,.,.,.,.,.,.;P_snvindel_phen=Autosomal_recessive_Dejerine-Sottas_syndrome|Charcot-Marie-Tooth_disease|Charcot-Marie-Tooth_disease,_type_I|Charcot-Marie-Tooth_disease,_type_IA|Charcot-Marie-Tooth_disease_type_1E|Charcot-Marie-Tooth_disease_type_2E|DEJERINE-SOTTAS_SYNDROME,_AUTOSOMAL_DOMINANT|Dejerine-Sottas_disease|Guillain-Barre_syndrome,_familial|Hereditary_liability_to_pressure_palsies|Inborn_genetic_diseases|Mitochondrial_complex_4_deficiency,_nuclear_type_3|Mitochondrial_complex_IV_deficiency,_nuclear_type_1|Roussy-Lévy_syndrome,Mitochondrial_complex_4_deficiency,_nuclear_type_3|Mitochondrial_complex_IV_deficiency,_nuclear_type_1,.,.,.,.,.,.,Autosomal_recessive_Dejerine-Sottas_syndrome|Charcot-Marie-Tooth_disease|Charcot-Marie-Tooth_disease,_type_I|Charcot-Marie-Tooth_disease,_type_IA|Charcot-Marie-Tooth_disease_type_1E|Charcot-Marie-Tooth_disease_type_2E|DEJERINE-SOTTAS_SYNDROME,_AUTOSOMAL_DOMINANT|Dejerine-Sottas_disease|Guillain-Barre_syndrome,_familial|Hereditary_liability_to_pressure_palsies|Inborn_genetic_diseases|Roussy-Lévy_syndrome,.,.,.,.,.,.;B_gain_source=.,.,.,.,.,1000g|esv3640046,1000g|esv3640046,1000g|esv3640046,.,.,.,.,.,.,.;B_gain_coord=.,.,.,.,.,17:14668590-15084842|17:14668590-15084842,17:14668590-15084842|17:14668590-15084842,17:14668590-15084842|17:14668590-15084842,.,.,.,.,.,.,.;B_gain_AFmax=.,.,.,.,.,0.272,0.272,0.272,.,.,.,.,.,.,.;B_loss_source=dbVar;B_loss_coord=chr17:14093499-15486000,chr17:14093499-15486000,chr17:14093499-15486000|chr17:14126839-14220873,chr17:14093499-15486000,chr17:14093499-15486000|chr17:14126839-14220873,chr17:14093499-15486000|chr17:14668589-15084842|chr17:14920183-14938805|chr17:14931264-14977742,chr17:14093499-15486000|chr17:14668589-15084842|chr17:14931264-14977742,chr17:14093499-15486000|chr17:14668589-15084842|chr17:14995672-15057656|chr17:14995771-15057475,chr17:14093499-15486000,chr17:14093499-15486000|chr17:15070858-15163533|chr17:15112458-15159531|chr17:15150741-15155583,chr17:14093499-15486000,chr17:14093499-15486000|chr17:15287341-15482010,chr17:14093499-15486000|chr17:15287341-15482010,chr17:14093499-15486000|chr17:15287341-15482010,chr17:14093499-15486000|chr17:15287341-15482010;B_loss_AFmax=0.01;po_B_gain_someG_source=17:14191081-14198547_DDD:48802|17:14224375-14483419_esv3640026|17:14668590-15084842_esv3640046;po_B_gain_someG_coord=17:14191081-14191901_DDD:48801|17:14224375-14483419_1000g|17:14668590-15084842_1000g;po_B_loss_someG_source=chr17:14096682-14108514_dbVar|chr17:14126839-14220873_dbVar|chr17:14155625-14155942_dbVar|chr17:14189910-14191555_dbVar|17:14189911-14191555_DDD:48799|17:14189911-14191555_esv2665541|17:14189911-14191557_1000g|17:14189912-14191555_IMH|17:14191081-14191901_DDD:48801|chr17:14220258-14221199_dbVar|17:14240918-14242023_DDD:48803|17:14240923-14242032_1000g|17:14240941-14242023_IMH|chr17:14241867-14248195_dbVar|chr17:14269249-14271950_dbVar|chr17:14277792-14278679_dbVar|chr17:14300414-14308117_dbVar|chr17:14314642-14320048_dbVar|chr17:14315900-14328444_dbVar|17:14332272-14332576_gnomAD-SV_v2.1_DEL_17_158748...;po_B_loss_someG_coord=chr17:14093499-15486000_dbVar|chr17:14105499-14108091_dbVar|chr17:14132469-14133456_dbVar|chr17:14186324-14196555_dbVar|chr17:14189910-14191557_dbVar|chr17:14189911-14191555_dbVar|17:14189911-14191555_gnomAD-SV_v2.1_DEL_17_158736|17:14189911-14191557_esv3640023|17:14190834-14191460_nsv574421|chr17:14210420-14210623_dbVar|chr17:14224374-14483419_dbVar|chr17:14240922-14242032_dbVar|17:14240923-14242032_esv3640027|chr17:14240941-14242023_dbVar|chr17:14256280-14258428_dbVar|chr17:14272755-14288592_dbVar|chr17:14284612-14628667_dbVar|chr17:14300914-14367997_dbVar|chr17:14314678-14320063_dbVar|chr17:14332272-14332576_dbVar...;GC_content_left=0.505;GC_content_right=0.42;SegDup_right=17:15422954-15470900;HI=3,30,.,.,.,.,.,.,3,.,.,.,.,.,.;TS=.,.,.,.,.,.,.,.,0,.,.,.,.,.,.;DDD_HI_percent=96.58,60.22,96.58,42.95,.,.,.,.,40.48,.,59.06,86.77,52.33,.,49.2;ExAC_delZ=-2.62354415217069,-2.62354415217069,-2.62354415217069,-2.62354415217069,.,.,.,.,-2.62354415217069,.,-2.62354415217069,-2.62354415217069,-2.62354415217069,.,-2.62354415217069;ExAC_dupZ=-0.276965016632095,-2.20885612270982,-2.20416703243077,-0.276965016632095,.,.,.,.,-1.55852578268999,.,-1.25885348060374,-2.24141606178004,-2.53125239294469,.,-2.53125239294469;ExAC_cnvZ=-1.64032033771268,-2.47162789907313,-2.47162789907313,-1.64032033771268,.,.,.,.,-2.47162789907313,.,-2.47162789907313,-2.47162789907313,-2.47162789907313,.,-2.47162789907313;ExAC_synZ=3.6772325764896,0.16322796385632,1.67462394349301,3.6772325764896,.,.,.,.,-0.424806725478425,.,0.241972873531725,-0.193191475026352,0.433099426603836,.,0.622094281610252;ExAC_misZ=4.17517843763452,0.511864222455301,1.73432863871862,4.17517843763452,.,.,.,.,1.07197498670855,.,-0.405588628410555,0.152950560142403,0.962176598220999,.,0.322678575541803;GenCC_disease=.,Leigh_syndrome|cytochrome-c_oxidase_deficiency_disease|mitochondrial_complex_4_deficiency,_nuclear_type_3|mitochondrial_disease,.,.,.,.,.,.,Charcot-Marie-Tooth_disease_type_1A|Charcot-Marie-Tooth_disease_type_1E|Charcot-Marie-Tooth_disease_type_3|hereditary_neuropathy_with_liability_to_pressure_palsies,.,spermatogenic_failure_81,.,.,.,.;GenCC_moi=.,AR,.,.,.,.,.,.,AD,.,.,.,.,.,.;GenCC_classification=.,Definitive|Moderate|Strong|Supportive,.,.,.,.,.,.,Definitive|Moderate|Strong|Supportive,.,Limited,.,.,.,.;GenCC_pmid=.,10767350|10767350[PMID]_12928484[PMID]_15455402[PMID]|12928484|15455402|16103131|22622581|24100867,.,.,.,.,.,.,10330345|118220|12578939|162500|18698610[PMID]_12090401[PMID]|20301384[PMID]|23224996|24175617|601097|7931393|8355122|9143558|NULL,.,18951373|36708031,.,.,.,.;NCBI_gene_ID=.,1352,146822,9953,.,94150,.,94151,5376,100616125,64518,284040,100533496,94145,201158;HGNC_gene_ID=.,HGNC:2260,HGNC:14395,HGNC:5198,.,HGNC:14386,.,HGNC:14387,HGNC:9118,HGNC:41597,HGNC:14293,HGNC:14383,HGNC:42961,HGNC:14382,HGNC:30453;OMIM_ID=602125|601097|612683,602125,.,.,.,.,.,.,601097,.,612683,.,.,.,.;OMIM_phenotype=.,Mitochondrial_complex_IV_deficiency,_nuclear_type_3,_619046_(3)_AR,.,.,.,.,.,.,?Neuropathy,_inflammatory_demyelinating,_139393_(3)_?AD|Charcot-Marie-Tooth_disease,_type_1A,_118220_(3)_AD|Charcot-Marie-Tooth_disease,_type_1E,_118300_(3)_AD|Dejerine-Sottas_disease,_145900_(3)_AD,AR|Neuropathy,_recurrent,_with_pressure_palsies,_162500_(3)_AD|Roussy-Levy_syndrome,_180800_(3)_AD,.,Spermatogenic_failure_81,_620277_(3)_AR,.,.,.,.;OMIM_inheritance=.,AR,.,.,.,.,.,.,?AD|AD|AD,AR,.,AR,.,.,.,.;OMIM_morbid=yes,yes,.,.,.,.,.,.,yes,.,yes,.,.,.,.;OMIM_morbid_candidate=yes,.,.,.,.,.,.,.,yes,.,.,.,.,.,.;LOEUF_bin=1,3,9,4,.,.,.,.,1,.,7,9,7,.,7;GnomAD_pLI=0.90958,0.08405,1.282e-06,0.29349,.,.,.,.,0.90958,.,1.9845e-17,0.095789,8.7378e-07,.,2.3189e-05;ExAC_pLI=0.83315,0.64657,0.0075064,0.085455,.,.,.,.,0.83315,.,3.1995e-14,0.24429,0.0023623,.,0.00013674;AnnotSV_ranking_score=1;AnnotSV_ranking_criteria=1A_(cf_Gene_count,_RE_gene,_+0.00)|2A_(cf_P_gain_source,_+1.00)|2H-2_(PMP22/TEKT3,_+0.00)|2J_(COX10,_+0.00)|2L_(TVP23C/TVP23C-CDRT4,_+0.00)|3A_(14_genes,_+0.00)|4O_(cf_po_B_gain_AllG_source,_B_gain_source,_po_B_gain_SomeG_source,_+0.00)|5F_(+0.00);ACMG_class=5,full=5,full=5,full=5,full=5,full=5,full=5,full=5,full=5,full=5,full=5,full=5,full=5,full=5,full=5;END=15442066;SVLEN=1341948\tGT\t1/.\n17\t34437476\t.\tT\t<DUP>\t.\tPASS\tAnnotSV_ID=17_34437476_34817481_DUP_1;SV_start=34437476;Biologist_ranking=Benign;Annotation_mode=full,split,split,split,split,split,split,split;CytoBand=q12;Gene_name=TBC1D3B|CCL3L3|CCL4L2|TBC1D3D|CCL3L1|TBC1D3H|TBC1D3F,TBC1D3B,CCL3L3,CCL4L2,TBC1D3D,CCL3L1,TBC1D3H,TBC1D3F;Closest_left=CCL4;Closest_right=ZNHIT3;Gene_count=7;Tx=.,NM_001001417,NM_001001437,NM_001291471,NM_001291465,NM_021006,NM_001123392,NM_032258;Tx_version=.,7,4,2,2,6,4,5;Tx_start=.,34493062,34522267,34538464,34581084,34623841,34746118,34797171;Tx_end=.,34503996,34524157,34540275,34592039,34625731,34757005,34808058;Overlapped_tx_length=.,10934,1890,1811,10955,1890,10887,10887;Overlapped_CDS_length=.,1650,282,312,1650,282,1650,1650;Overlapped_CDS_percent=.,100,100,100,100,100,100,100;Frameshift=.,no,no,no,no,no,no,no;Exon_count=.,14,3,3,14,3,14,14;Location=.,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd;Location2=.,5'UTR-3'UTR,5'UTR-3'UTR,5'UTR-3'UTR,5'UTR-3'UTR,5'UTR-3'UTR,5'UTR-3'UTR,5'UTR-3'UTR;Intersect_start=.,34493062,34522267,34538464,34581084,34623841,34746118,34797171;Intersect_end=.,34503996,34524157,34540275,34592039,34625731,34757005,34808058;RE_gene=PEX12_(morbid/RE=GH_enhancer)|PIGW_(morbid/RE=EA_enhancer)|ZNHIT3_(morbid/RE=ABC_enhancer+GH_enhancer);po_P_gain_phen=17q12_recurrent_(RCAD_syndrome)_region_(includes_HNF1B);po_P_gain_source=dbVar:nssv15149908|nssv15152170|dbVar:nssv15159024|dbVar:nssv15160732|dbVar:nssv15159027|dbVar:nssv15127236|dbVar:nssv15775117|dbVar:nssv15132421|dbVar:nssv15132422|dbVar:nssv15155541|dbVar:nssv18330713|dbVar:nssv15155542|dbVar:nssv15605916|dbVar:nssv16736632|dbVar:nssv15138685|dbVar:nssv15142873|dbVar:nssv15141421|dbVar:nssv15132229|nssv15139703|dbVar:nssv15125411|dbVar:nssv15125622|dbVar:nssv15130152|nssv15132345|nssv15139691|dbVar:nssv15135915|dbVar:nssv15124805|dbVar:nssv18842005|TS3:ISCA-37432|dbVar:nssv15132164|dbVar:nssv17649867|dbVar:nssv16215252|dbVar:nssv15123756|dbVar:nssv15133519|dbVar:nssv16736603|dbVar:nssv15135870;po_P_gain_coord=17:527-81041938|17:7215-81058310|17:8548-81060040|17:12345-81057996|17:16757564-81048189|17:21690654-38772647|17:34310999-36297053|17:34360169-36209228|17:34425363-36283612|17:34425364-36404555|17:34426245-36225988|17:34437476-36214026|17:34437476-36243028|17:34437483-36244358|17:34437483-36350584|17:34437483-36404555|17:34508118-36248918|17:34526602-36188734|17:34604365-36231917|17:34611353-36248918|17:34611353-36263019|17:34750819-36354738|17:34752222-36105007|17:34815073-36192489|17:34815185-36209228|17:34815467-36249366|17:34815552-36244358|17:34815552-36249800|17:34817423-36173763|17:34817423-36243028|17:34817423-36248918;po_P_gain_percent=0.47|0.47|0.47|0.47|0.59|2.22|19.13|20.55|20.45|19.20|21.11|21.39|21.05|21.03|19.86|19.32|17.77|17.50|13.09|12.59|12.48|4.16|4.82|0.17|0.16|0.14|0.14|0.13|0.00|0.00|0.00;po_P_loss_phen=17q12_recurrent_(RCAD_syndrome)_region_(includes_HNF1B);po_P_loss_source=dbVar:nssv18830976|dbVar:nssv15137372|dbVar:nssv8639331|dbVar:nssv15142228|dbVar:nssv15133035|dbVar:nssv17976904|dbVar:nssv15142015|dbVar:nssv15153182|dbVar:nssv15153183|dbVar:nssv15133261|dbVar:nssv15124226|dbVar:nssv15132100|nssv15139544|dbVar:nssv15127168|dbVar:nssv15133024|dbVar:nssv17955818|HI3:ISCA-37432|dbVar:nssv15149164|dbVar:nssv15129143|dbVar:nssv15130784|nssv15172799|dbVar:nssv15173493|dbVar:nssv15131818|dbVar:nssv15135737|dbVar:nssv15135591|dbVar:nssv15134619;po_P_loss_coord=17:30572863-35843988|17:34360169-36248859|17:34360228-36473024|17:34447114-36283612|17:34450406-36248918|17:34463924-36410559|17:34475680-36283612|17:34475680-36311009|17:34477386-36404555|17:34508118-36173763|17:34604365-36188734|17:34611353-36248918|17:34750819-81048189|17:34768967-36263019|17:34807070-36284994|17:34815073-36192489|17:34815073-36192492|17:34815552-36208392|17:34815552-36244358|17:34815552-36307189|17:34817423-36168104|17:34817423-36188700|17:34817423-36248918|17:34817423-36263019;po_P_loss_percent=7.21|20.12|17.99|20.17|20.41|18.16|18.91|18.62|17.65|18.57|13.45|12.59|0.14|3.25|0.70|0.17|0.17|0.14|0.14|0.13|0.00|0.00|0.00|0.00;B_gain_source=dgv122e55,DDD:49237|DDD:49240|DDD:49243|dgv122e55|dgv3144n100|esv2760467|esv2762388,DDD:49237|DDD:49240|DDD:49243|DDD:49256|TS40:ISCA-46706|dgv122e55|dgv3144n100|esv2760467|esv2762388|nsv514837,DDD:49237|DDD:49240|DDD:49256|dgv122e55|dgv3144n100|esv2760467|esv2762388,DDD:49237|DDD:49240|dgv122e55|dgv3144n100|esv2760467|esv2762388,DDD:49240|dgv122e55|dgv3144n100|esv2760467|esv2762388|nsv514839,DDD:49240|dgv122e55,dgv122e55;B_gain_coord=17:34426246-34870708,17:34387632-34629696|17:34416538-34629684|17:34426246-34870708|17:34435513-34629696|17:34435674-34621060|17:34436438-34780239|17:34443777-34537005,17:34387632-34629696|17:34416538-34629684|17:34426246-34870708|17:34435513-34629696|17:34435674-34621060|17:34436438-34780239|17:34443777-34537005|17:34502930-34524195|17:34502941-34524192|17:34517741-34540630,17:34387632-34629696|17:34416538-34629684|17:34426246-34870708|17:34435513-34629696|17:34435674-34621060|17:34436438-34780239|17:34517741-34540630,17:34387632-34629696|17:34416538-34629684|17:34426246-34870708|17:34435513-34629696|17:34435674-34621060|17:34436438-34780239,17:34387632-34629696|17:34416538-34629684|17:34426246-34870708|17:34435513-34629696|17:34436438-34780239|17:34610042-34641487,17:34426246-34870708|17:34436438-34780239,17:34426246-34870708;B_gain_AFmax=0.03,0.1041,0.1041,0.0994,0.0994,0.0994,0.0994,0.03;B_loss_source=.,DDD:49240|DDD:49243,DDD:49240|DDD:49243|DDD:49256|HI40:ISCA-46698|dgv545e199,DDD:49240|DDD:49256|HI40:ISCA-46698|dgv545e199,DDD:49240,DDD:49240|dgv546e199,DDD:49240,.;B_loss_coord=.,17:34436438-34780239|17:34443777-34537005,17:34436438-34780239|17:34443777-34537005|17:34508446-34554792|17:34509780-34551554|17:34517741-34540630,17:34436438-34780239|17:34508446-34554792|17:34509780-34551554|17:34517741-34540630,17:34436438-34780239,17:34436438-34780239|17:34591446-34670592,17:34436438-34780239,.;B_loss_AFmax=.,0.0982,0.15,0.15,0.0982,0.1,0.0982,.;B_inv_source=IMH;B_inv_coord=17:30436599-65922464|17:32367054-60556542|17:32367223-60556516|17:32367435-60556508;B_inv_AFmax=0.2252;po_B_gain_someG_source=17:34416412-34496071_nsv514836|17:34424712-34477480_dgv908e212|17:34426246-34870708_dgv122e55|17:34435513-34485079_dgv3148n100|17:34435674-34621060_DDD:49237|17:34436100-34482872_1000g|17:34436438-34780239_DDD:49240|17:34437483-34477480_dgv910e212|17:34502930-34524195_nsv514837|17:34517741-34540630_DDD:49256|17:34580927-34587273_DDD:49263|17:34625755-34641426_DDD:49271|17:34750173-34796456_DDD:49284|;po_B_gain_someG_coord=17:34387632-34629696_esv2762388|17:34416538-34629684_dgv3144n100|17:34425364-34477387_dgv121e55|17:34431132-34484342_DDD:49235|17:34435513-34629696_esv2760467|17:34436100-34482872_1000g|17:34436100-34482872_dgv572e214|17:34437129-34485091_esv2421587|17:34443777-34537005_DDD:49243|17:34502941-34524192_TS40:ISCA-46706|17:34538648-34540293_nsv514838|17:34610042-34641487_nsv514839|17:34746065-34746521_DDD:49283|17:34800000-34914000_gnomAD-SV_v2.1_DUP_17_43954;po_B_loss_someG_source=17:34438323-34449809_DDD:49242|chr17:34445826-34446140_dbVar|17:34508446-34554792_dgv545e199|17:34517741-34540630_DDD:49256|chr17:34540766-34540825_dbVar|17:34580927-34587273_DDD:49263|17:34625755-34641426_DDD:49271|chr17:34642332-34642392_dbVar|17:34702019-34702094_DDD:49280|17:34762644-34775639_DDD:49288|chr17:34812000-36251000_dbVar;po_B_loss_someG_coord=17:34436438-34780239_DDD:49240|17:34443777-34537005_DDD:49243|17:34446621-34447535_DDD:49246|17:34509780-34551554_HI40:ISCA-46698|chr17:34528205-34528314_dbVar|17:34540766-34540825_gnomAD-SV_v2.1_DEL_17_159956|17:34591446-34670592_dgv546e199|chr17:34629804-34629885_dbVar|17:34642332-34642392_gnomAD-SV_v2.1_DEL_17_159958|17:34750173-34796456_DDD:49284|chr17:34808750-34815000_dbVar;GC_content_left=0.435;GC_content_right=0.515;Repeat_coord_left=17:34437545-34437861;Repeat_type_left=7SLRNA;SegDup_left=17:34405992-34437446|17:34405992-34437446;DDD_HI_percent=94.43,94.43,88.85,84.65,.,88.49,93.12,93.73;ExAC_synZ=2.42746656950142,2.42746656950142,.,1.02068766819866,.,.,.,1.8673923772413;ExAC_misZ=2.41694262394586,2.41694262394586,.,1.31010018701924,.,.,.,2.14567117504116;NCBI_gene_ID=.,414059,414062,9560,101060389,6349,729877,84218;HGNC_gene_ID=.,HGNC:27011,HGNC:30554,HGNC:24066,HGNC:28944,HGNC:10628,HGNC:30708,HGNC:18257;OMIM_morbid_candidate=yes,.,.,.,.,yes,.,.;LOEUF_bin=7,7,9,9,.,9,.,9;GnomAD_pLI=0.31517,0.21949,0.31517,0.088586,.,0.12057,.,1.3666e-05;ExAC_pLI=0.63692,0.63692,.,0.48994,.,.,.,0.62038;AnnotSV_ranking_score=-1;AnnotSV_ranking_criteria=1A_(cf_Gene_count,_RE_gene,_+0.00)|2D_(cf_B_gain_source,_-1.00)|2B_(cf_po_P_gain_source,_TS,_OMIM_morbid,_+0.00)|3A_(7_genes,_+0.00)|4O_(cf_po_B_gain_AllG_source,_B_gain_source,_po_B_gain_SomeG_source,_+0.00)|5F_(+0.00);ACMG_class=1,full=1,full=1,full=1,full=1,full=1,full=1,full=1;END=34817481;SVLEN=380006\tGT\t1/.\n17\t44171889\t.\tC\t<DUP>\t.\tPASS\tAnnotSV_ID=17_44171889_44297143_DUP_1;SV_start=44171889;Biologist_ranking=Benign;Annotation_mode=full,split,split;CytoBand=q21.31;Gene_name=KANSL1|KANSL1-AS1,KANSL1,KANSL1-AS1;Closest_left=STH;Closest_right=ARL17B;Gene_count=2;Tx=.,NM_001405854,NR_034172;Tx_version=.,1,1;Tx_start=.,44107281,44270938;Tx_end=.,44302125,44274089;Overlapped_tx_length=.,125255,3151;Overlapped_CDS_length=.,1431,0;Overlapped_CDS_percent=.,43,0;Frameshift=.,no,.;Exon_count=.,16,2;Location=.,intron2-intron4,txStart-txEnd;Location2=.,5'UTR-CDS,UTR;Dist_nearest_SS=.,37,.;Nearest_SS_type=.,5',.;Intersect_start=.,44171888,44270938;Intersect_end=.,44297143,44274089;RE_gene=GOSR2_(morbid/RE=ABC_enhancer+GH_enhancer)|MAPT_(morbid/RE=ABC_enhancer)|NSF_(morbid/RE=EA_enhancer)|PLEKHM1_(morbid/RE=ABC_enhancer);po_P_gain_source=dbVar:nssv15149908|nssv15152170|dbVar:nssv15159024|dbVar:nssv15160732|dbVar:nssv15159027|dbVar:nssv15127236|dbVar:nssv15149626|dbVar:nssv15150382|dbVar:nssv16207328|dbVar:nssv15141990;po_P_gain_coord=17:527-81041938|17:7215-81058310|17:8548-81060040|17:12345-81057996|17:16757564-81048189|17:42580685-81085615|17:43655357-44292742|17:43655357-44784639|17:43710151-44292742;po_P_gain_percent=0.15|0.15|0.15|0.15|0.19|0.33|18.96|11.09|20.74;po_P_loss_phen=Koolen-De_Vries_syndrome,_610443_(3)_AD;po_P_loss_source=dbVar:nssv15127168|dbVar:nssv16215146|dbVar:nssv15141350|dbVar:nssv16254531|dbVar:nssv15124147|dbVar:nssv15135761|dbVar:nssv15137490|dbVar:nssv18330259|dbVar:nssv15129570|dbVar:nssv15138300|dbVar:nssv15137112|dbVar:nssv15132122|dbVar:nssv15132318|nssv15133093|dbVar:nssv15135170|dbVar:nssv15132284|nssv15139974|dbVar:nssv15136771|dbVar:nssv15136778|dbVar:nssv15132380|dbVar:nssv15173411|dbVar:nssv18329240|dbVar:nssv15133422|dbVar:nssv15143597|nssv15155552|dbVar:nssv15138826|dbVar:nssv15142266|nssv17976955|nssv18326376|dbVar:nssv15173506|dbVar:nssv15136011|dbVar:nssv15133428|dbVar:nssv15132370|nssv15140010|dbVar:nssv15132745|dbVar:nssv16091744|dbVar:nssv15135222|dbVar:nssv15161495|dbVar:nssv15129007|dbVar:nssv15152077|dbVar:nssv15132384|dbVar:nssv15136234|dbVar:nssv15132385|dbVar:nssv15133429|morbid:KANSL1|HI3:KANSL1|dbVar:nssv16252231;po_P_loss_coord=17:34750819-81048189|17:43559852-44248220|17:43585761-44248995|17:43586397-44212416|17:43592411-44249054|17:43593477-44224221|17:43622198-44201470|17:43622198-44212416|17:43629216-44399455|17:43648492-44214888|17:43651732-44351152|17:43653228-44351644|17:43655748-44176717|17:43655748-44224221|17:43655748-44351152|17:43656694-44176717|17:43656694-44694311|17:43675409-44351152|17:43685926-44212727|17:43693539-44212416|17:43693608-44176717|17:43703801-44212416|17:43703802-44187492|17:43703802-44212416|17:43705602-44208333|17:43706887-44171947|17:43706887-44176171|17:43706887-44176717|17:43706887-44207977|17:43706887-44210822|17:43706887-44351152|17:43706887-44694283|17:43706896-44762543|17:43710371-44212416|17:43715081-44176717|17:43717704-44345038|17:43717704-44351152|17:43751675-44351152|17:44107282-44302733|17:44107283-44302733|17:44174220-44481307;po_P_loss_percent=0.27|11.09|11.63|6.47|11.75|8.30|5.11|6.87|16.26|7.59|17.91|17.93|0.93|9.21|18.01|0.93|12.07|18.54|7.75|7.81|1.00|7.97|3.23|7.97|7.25|0.01|0.91|1.03|7.20|7.73|19.44|12.69|11.87|8.07|1.05|19.97|19.77|20.89|64.08|64.09|40.03;P_snvindel_nb=26,26,.;P_snvindel_phen=Inborn_genetic_diseases|Intellectual_disability|Koolen-de_Vries_syndrome|Neurodevelopmental_delay|not_specified,Inborn_genetic_diseases|Intellectual_disability|Koolen-de_Vries_syndrome|Neurodevelopmental_delay|not_specified,.;B_gain_source=DDD:49604|IMH|dgv127e55|dgv128e55|dgv3181n100|esv2422002|esv2762433|nsv516807,DDD:49604|IMH|dgv127e55|dgv128e55|dgv3181n100|esv2422002|esv2762433|nsv516807,DDD:49604|DDD:49608|DDD:49609|DDD:49611|DDD:49618|IMH|dgv127e55|dgv128e55|dgv130e55|dgv3181n100|dgv367n27|dgv938e212|dgv939e212|dgv943e212|esv2422002|esv2760451|esv2762433|gnomAD-SV_v2.1_DUP_17_44188|nsv514850|nsv516807;B_gain_coord=17:43574135-44788194|17:43655786-44366714|17:44004973-44811116|17:44094472-44364056|17:44109475-44793283|17:44145590-44364158|17:44165804-44362009|17:44170038-44744285,17:43574135-44788194|17:43655786-44366714|17:44004973-44811116|17:44094472-44364056|17:44109475-44793283|17:44145590-44364158|17:44165804-44362009|17:44170038-44744285,17:43574135-44788194|17:43655786-44366714|17:44004973-44811116|17:44094472-44364056|17:44109475-44793283|17:44145590-44364158|17:44163926-44293020|17:44165703-44291551|17:44165804-44362009|17:44170038-44744285|17:44175518-44443972|17:44176859-44397890|17:44187493-44292742|17:44187493-44364056|17:44187493-44789621|17:44194107-44762405|17:44208145-44764994|17:44212647-44369642|17:44212745-44369562|17:44212825-44276618|17:44249111-44320939;B_gain_AFmax=0.17,0.17,0.5406;B_loss_source=esv2762433,esv2762433,DDD:49609|DDD:49611|dgv940e212|dgv941e212|esv2760451|esv2762433;B_loss_coord=17:43574135-44788194,17:43574135-44788194,17:43574135-44788194|17:44176859-44397890|17:44190672-44785015|17:44194107-44762405|17:44208145-44764994|17:44212311-44292742;B_loss_AFmax=0.07,0.07,0.2994;B_inv_source=IMH;B_inv_coord=17:30436599-65922464|17:32367054-60556542|17:32367223-60556516|17:32367435-60556508|17:43662689-44338152|17:43664434-44336296|17:43681870-44318931,17:30436599-65922464|17:32367054-60556542|17:32367223-60556516|17:32367435-60556508|17:43662689-44338152|17:43664434-44336296|17:43681870-44318931,17:30436599-65922464|17:32367054-60556542|17:32367223-60556516|17:32367435-60556508|17:43662689-44338152|17:43664434-44336296|17:43681870-44318931|17:43702611-44296817;B_inv_AFmax=0.2252;po_B_gain_someG_source=17:43655786-44366714_IMH|17:44094472-44364056_dgv128e55|17:44145590-44364158_dgv3181n100|17:44163926-44293020_dgv367n27|17:44165339-44211686_1000g|17:44165339-44211686_dgv575e214|17:44165804-44362009_esv2422002|17:44170285-44212803_DDD:49606|17:44176395-44176717_1000g|17:44187493-44214094_dgv937e212|17:44187493-44364056_dgv130e55|17:44194107-44762405_DDD:49611|17:44209763-44267388_DDD:49612|17:44212745-44369562_gnomAD-SV_v2.1_DUP_17_44188|17:44223908-44224221_1000g|17:44230894-44262697_1000g|17:44249111-44320939_DDD:49618|17:44282756-44286423_IMH|;po_B_gain_someG_coord=17:43574135-44788194_esv2762433|17:44004973-44811116_dgv127e55|17:44109475-44793283_nsv516807|17:44149791-44248860_DDD:49602|17:44165000-44217000_gnomAD-SV_v2.1_DUP_17_44187|17:44165339-44211686_1000g|17:44165703-44291551_nsv514850|17:44170038-44744285_DDD:49604|17:44175518-44443972_DDD:49608|17:44176859-44397890_DDD:49609|17:44187493-44292742_dgv938e212|17:44187493-44789621_dgv939e212|17:44208145-44764994_esv2760451|17:44212647-44369642_IMH|17:44212825-44276618_dgv943e212|17:44230894-44262697_1000g|17:44230894-44262697_dgv576e214|17:44280980-44369559_DDD:49623|17:44283572-44782177_esv3893020;po_B_loss_someG_source=17:44170285-44212803_DDD:49606|chr17:44176395-44176717_dbVar|chr17:44176407-44176807_dbVar|17:44176859-44397890_DDD:49609|17:44190672-44785015_dgv940e212|chr17:44192997-44193064_dbVar|17:44208145-44764994_esv2760451|chr17:44223760-44224221_dbVar|17:44223908-44224221_1000g|17:44223908-44224221_esv2662030|chr17:44265262-44265312_dbVar|;po_B_loss_someG_coord=17:43574135-44788194_esv2762433|17:44176395-44176717_1000g|17:44176395-44176717_esv2675570|17:44176407-44176807_gnomAD-SV_v2.1_DEL_17_160649|chr17:44179666-44182382_dbVar|chr17:44192422-44192507_dbVar|17:44194107-44762405_DDD:49611|17:44212311-44292742_dgv941e212|17:44223760-44224221_gnomAD-SV_v2.1_DEL_17_160652|chr17:44223908-44224221_dbVar|chr17:44256597-44256681_dbVar|chr17:44278890-44279167_dbVar;GC_content_left=0.38;GC_content_right=0.46;Repeat_coord_right=17:44297188-44297495;Repeat_type_right=AluY;SegDup_left=17:44164882-44183555;SegDup_right=17:44294406-44329730;HI=3,3,.;TS=.,0,.;DDD_HI_percent=16.23,16.23,.;ExAC_synZ=-0.71959827485963,-0.71959827485963,.;ExAC_misZ=0.443929223699058,0.443929223699058,.;GenCC_disease=.,Koolen-de_Vries_syndrome|Koolen-de_Vries_syndrome_due_to_a_point_mutation,.;GenCC_moi=.,AD,.;GenCC_classification=.,Definitive|Strong|Supportive,.;GenCC_pmid=.,22544363|22544363[PMID]_22544367[PMID]_20301783[PMID]|22544367,.;NCBI_gene_ID=.,284058,644246;HGNC_gene_ID=.,HGNC:24565,HGNC:43740;OMIM_ID=612452,612452,.;OMIM_phenotype=.,Koolen-De_Vries_syndrome,_610443_(3)_AD,.;OMIM_inheritance=.,AD,.;OMIM_morbid=yes,yes,.;LOEUF_bin=0,0,.;GnomAD_pLI=0.99972,0.99972,.;ExAC_pLI=0.99973,0.99973,.;AnnotSV_ranking_score=-1;AnnotSV_ranking_criteria=1A_(cf_Gene_count,_RE_gene,_+0.00)|2D_(cf_B_gain_source,_-1.00)|2B_(cf_po_P_gain_source,_TS,_OMIM_morbid,_+0.00)|2E_(cf_B_gain_source,_+0.00)|2I-3_(KANSL1,_+0.00)|3A_(2_genes,_+0.00)|4O_(cf_po_B_gain_AllG_source,_B_gain_source,_po_B_gain_SomeG_source,_+0.00)|5F_(+0.00);ACMG_class=1,full=1,full=1;END=44297143;SVLEN=125255\tGT\t1/.\n22\t18894836\t.\tC\t<DEL>\t.\tPASS\tAnnotSV_ID=22_18894836_21464119_DEL_1;SV_start=18894836;Biologist_annotation=Di_George_syndrom;Biologist_ranking=Pathogenic;Annotation_mode=full,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split,split;CytoBand=q11.21;Gene_name=DGCR6|PRODH|LOC122455341|DGCR5|FAM246C|DGCR2|DGCR11|ESS2|TSSK2|GSC2|LINC01311|SLC25A1|CLTCL1|HIRA|MRPL40|C22orf39|UFD1-AS1|UFD1|CDC45|CLDN5|LINC00895|SEPTIN5|SEPT5-GP1BB|GP1BB|TBX1|GNB1L|RTL10|TXNRD2|COMT|MIR4761|ARVCF|TANGO2|MIR185|DGCR8|MIR3618|MIR1306|TRMT2A|MIR6816|RANBP1|SNORA77B|ZDHHC8|CCDC188|LINC02891|LINC00896|RTN4R|MIR1286|DGCR6L|FAM230A|FAM247B|GGTLC3|TMEM191B|PI4KAP1|RIMBP3|FAM246B|FAM230J|FAM230G|ZNF74|SCARF2|KLHL22|MED15|POM121L4P|TMEM191A|PI4KA|SERPIND1|SNAP29|CRKL|LINC01637|AIFM3|LZTR1|THAP7|THAP7-AS1|TUBA3FP|P2RX6|SLC7A4|MIR649|P2RX6P|LRRC74B|BCRP2,DGCR6,PRODH,LOC122455341,DGCR5,FAM246C,DGCR2,DGCR11,ESS2,TSSK2,GSC2,LINC01311,SLC25A1,CLTCL1,HIRA,MRPL40,C22orf39,UFD1-AS1,UFD1,CDC45,CLDN5,LINC00895,SEPTIN5,SEPT5-GP1BB,GP1BB,TBX1,GNB1L,RTL10,TXNRD2,COMT,MIR4761,ARVCF,TANGO2,MIR185,DGCR8,MIR3618,MIR1306,TRMT2A,MIR6816,RANBP1,SNORA77B,ZDHHC8,CCDC188,LINC02891,LINC00896,RTN4R,MIR1286,DGCR6L,FAM230A,FAM247B,GGTLC3,TMEM191B,PI4KAP1,RIMBP3,FAM246B,FAM230J,FAM230G,ZNF74,SCARF2,KLHL22,MED15,POM121L4P,TMEM191A,PI4KA,SERPIND1,SNAP29,CRKL,LINC01637,AIFM3,LZTR1,THAP7,THAP7-AS1,TUBA3FP,P2RX6,SLC7A4,MIR649,P2RX6P,LRRC74B,BCRP2;Closest_left=FAM230F;Closest_right=LOC102724728;Gene_count=78;Tx=.,NM_005675,NM_016335,NR_173081,NR_110533,NM_001396027,NM_005137,NR_024157,NM_022719,NM_053006,NM_005315,NR_103767,NM_001256534,NM_007098,NM_003325,NM_003776,NM_173793,NR_186687,NM_005659,NM_001178010,NM_001130861,NR_024381,NM_002688,NR_037611,NM_000407,NM_001379200,NM_053004,NM_024627,NM_006440,NM_000754,NR_039918,NM_001670,NM_001322141,NR_029706,NM_022720,NR_037412,NR_031706,NM_001331039,NR_106874,NM_001278639,NR_145765,NM_001185024,NM_001365892,NR_038460,NR_026919,NM_023004,NR_031618,NM_033257,NR_165629,NR_186690,NM_001355479,NM_001242313,NR_003563,NM_015672,NM_001396026,NR_136569,NR_165637,NM_001256524,NM_153334,NM_032775,NM_001003891,NR_024592,NR_026815,NM_058004,NM_000185,NM_004782,NM_005207,NR_110537,NM_144704,NM_006767,NM_030573,NR_027051,NR_003608,NM_001394691,NM_004173,NR_030379,NR_002829,NM_001291006,NR_037566;Tx_version=.,6,6,1,2,1,3,1,3,5,2,1,2,4,4,4,5,1,7,2,1,1,6,1,5,1,3,6,5,4,1,3,2,1,7,1,1,2,1,2,1,2,2,2,1,6,1,4,1,1,1,1,1,2,1,2,1,2,7,4,3,1,1,4,4,4,4,1,3,4,3,1,1,1,3,1,1,2,1;Tx_start=.,18893832,18900293,18926981,18957980,19017036,19023798,19033674,19117791,19118820,19134505,19159218,19163093,19166985,19318220,19420067,19428408,19434956,19437433,19467348,19510546,19553652,19702025,19704742,19711061,19748300,19770745,19833668,19863044,19929294,19951275,19957418,20008632,20020661,20067763,20073268,20073580,20099397,20102208,20103626,20113924,20119326,20135938,20186251,20193854,20228937,20236656,20301760,20326419,20351090,20366210,20377668,20383730,20455681,20483850,20632119,20689194,20748440,20778873,20795805,20861896,21043842,21055401,21061978,21128400,21213294,21271694,21311379,21319459,21336585,21353392,21356210,21362491,21369453,21383006,21388464,21396680,21400234,21457304;Tx_end=.,18899601,18923806,18935206,19018755,19017734,19109925,19035888,19132164,19120135,19137805,19160345,19166018,19279242,19419256,19423598,19435234,19439211,19466716,19508135,19512860,19554362,19710842,19712297,19712294,19754857,19842397,19842397,19929341,19957498,19951357,20004346,20054687,20020743,20099395,20073356,20073665,20104749,20102274,20114878,20114049,20135530,20138578,20192441,20196060,20255841,20236734,20307583,20350461,20362291,20368028,20380440,20398695,20461786,20484549,20656858,20706786,20762745,20792112,20850082,20941906,21046009,21058891,21213099,21142008,21245502,21308035,21318968,21335647,21353321,21356407,21364663,21368576,21382297,21386850,21388561,21398538,21418457,21476575;Overlapped_tx_length=.,4766,23513,8225,60775,698,86127,2214,14373,1315,3300,1127,2925,112257,101036,3531,6826,4255,29283,40787,2314,710,8817,7555,1233,6557,71652,8729,66297,28204,82,46928,46055,82,31632,88,85,5352,66,11252,125,16204,2640,6190,2206,26904,78,5823,24042,11201,1818,2772,14965,6105,699,24739,17592,14305,13239,54277,80010,2167,3490,151121,13608,32208,36341,7589,16188,16736,3015,8453,6085,12844,3844,97,1858,18223,6815;Overlapped_CDS_length=.,392,1803,0,0,696,1653,0,1431,1077,618,0,957,4923,3054,621,318,0,924,1797,912,0,1110,0,621,1515,984,1095,1575,816,0,2889,1110,0,2322,0,0,1932,0,837,0,2337,1209,0,0,1422,0,663,0,0,678,1041,0,4920,699,0,0,1935,2607,1905,2367,0,0,6309,1500,777,912,0,1818,2523,930,0,0,1422,1908,0,0,1179,0;Overlapped_CDS_percent=.,59,100,0,0,100,100,0,100,88,100,0,100,100,100,100,100,0,100,100,52,0,100,0,100,100,100,82,100,100,0,100,100,0,100,0,0,100,0,100,0,100,100,0,0,100,0,100,0,0,100,100,0,91,100,0,0,100,100,100,100,0,0,100,100,100,100,0,100,100,100,0,0,100,100,0,0,100,0;Frameshift=.,yes,no,.,.,no,no,.,no,no,no,.,no,no,no,no,no,.,no,no,no,.,no,.,no,no,no,no,no,no,.,no,no,.,no,.,.,no,.,no,.,no,no,.,.,no,.,no,.,.,no,no,.,no,no,.,.,no,no,no,no,.,.,no,no,no,no,.,no,no,no,.,.,no,no,.,.,no,.;Exon_count=.,5,14,2,6,3,10,1,10,1,3,1,8,33,25,4,3,2,12,20,1,1,12,12,2,7,8,3,18,6,1,20,9,1,14,1,1,12,1,6,1,11,9,4,1,2,1,5,12,2,6,9,15,1,1,9,7,6,14,7,18,1,8,55,5,5,3,2,21,21,4,2,3,12,5,1,2,10,6;Location=.,intron2-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-intron1;Location2=.,CDS-3'UTR,5'UTR-3'UTR,UTR,UTR,5'UTR-3'UTR,5'UTR-3'UTR,UTR,5'UTR-3'UTR,5'UTR-3'UTR,5'UTR-3'UTR,UTR,5'UTR-3'UTR,5'UTR-3'UTR,5'UTR-3'UTR,5'UTR-3'UTR,5'UTR-3'UTR,UTR,5'UTR-3'UTR,5'UTR-3'UTR,5'UTR-3'UTR,UTR,5'UTR-3'UTR,UTR,5'UTR-3'UTR,5'UTR-3'UTR,5'UTR-3'UTR,5'UTR-3'UTR,5'UTR-3'UTR,5'UTR-3'UTR,UTR,5'UTR-3'UTR,5'UTR-3'UTR,UTR,5'UTR-3'UTR,UTR,UTR,5'UTR-3'UTR,UTR,5'UTR-3'UTR,UTR,5'UTR-3'UTR,5'UTR-3'UTR,UTR,UTR,5'UTR-3'UTR,UTR,5'UTR-3'UTR,UTR,UTR,5'UTR-3'UTR,5'UTR-3'UTR,UTR,5'UTR-3'UTR,5'UTR-3'UTR,UTR,UTR,5'UTR-3'UTR,5'UTR-3'UTR,5'UTR-3'UTR,5'UTR-3'UTR,UTR,UTR,5'UTR-3'UTR,5'UTR-3'UTR,5'UTR-3'UTR,5'UTR-3'UTR,UTR,5'UTR-3'UTR,5'UTR-3'UTR,5'UTR-3'UTR,UTR,UTR,5'UTR-3'UTR,5'UTR-3'UTR,UTR,UTR,5'UTR-3'UTR,UTR;Dist_nearest_SS=.,597,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,6098;Nearest_SS_type=.,5',.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,3';Intersect_start=.,18894835,18900293,18926981,18957980,19017036,19023798,19033674,19117791,19118820,19134505,19159218,19163093,19166985,19318220,19420067,19428408,19434956,19437433,19467348,19510546,19553652,19702025,19704742,19711061,19748300,19770745,19833668,19863044,19929294,19951275,19957418,20008632,20020661,20067763,20073268,20073580,20099397,20102208,20103626,20113924,20119326,20135938,20186251,20193854,20228937,20236656,20301760,20326419,20351090,20366210,20377668,20383730,20455681,20483850,20632119,20689194,20748440,20778873,20795805,20861896,21043842,21055401,21061978,21128400,21213294,21271694,21311379,21319459,21336585,21353392,21356210,21362491,21369453,21383006,21388464,21396680,21400234,21457304;Intersect_end=.,18899601,18923806,18935206,19018755,19017734,19109925,19035888,19132164,19120135,19137805,19160345,19166018,19279242,19419256,19423598,19435234,19439211,19466716,19508135,19512860,19554362,19710842,19712297,19712294,19754857,19842397,19842397,19929341,19957498,19951357,20004346,20054687,20020743,20099395,20073356,20073665,20104749,20102274,20114878,20114049,20135530,20138578,20192441,20196060,20255841,20236734,20307583,20350461,20362291,20368028,20380440,20398695,20461786,20484549,20656858,20706786,20762745,20792112,20850082,20941906,21046009,21058891,21213099,21142008,21245502,21308035,21318968,21335647,21353321,21356407,21364663,21368576,21382297,21386850,21388561,21398538,21418457,21464119;RE_gene=ABL1_(morbid/RE=mTL_miRNA)|ACTN4_(morbid/RE=mTL_miRNA)|ACVR2B_(morbid/RE=mTL_miRNA)|ADA2_(morbid/RE=ABC_enhancer)|ADAR_(morbid/RE=mTL_miRNA)|ADH5_(morbid/RE=mTL_miRNA)|AFF2_(HI=3/morbid/RE=mTL_miRNA)|AGO1_(morbid/RE=mTL_miRNA)|AGO2_(morbid/RE=mTL_miRNA)|AHI1_(morbid/RE=mTL_miRNA)|AHR_(morbid/RE=mTL_miRNA)|AKT1_(morbid/RE=mTL_miRNA)|ALG1_(morbid/RE=mTL_miRNA)|AMH_(morbid/RE=mTL_miRNA)|APCDD1_(morbid/RE=mTL_miRNA)|AR_(HI=3/morbid/RE=mTL_miRNA)|ARID1A_(HI=3/morbid/RE=mTL_miRNA)|ASH1L_(HI=3/morbid/RE=mTL_miRNA)|ATM_(HI=3/morbid/RE=mTL_miRNA)|ATP6AP1_(morbid/RE=mTL_miRNA)|ATP6V0A2_(morbid/RE=mTL_miRNA)|ATP6V1E1_(morbid/RE=ABC_enhancer)|ATR_(morbid/RE=mTL_miRNA)|B4GALT1_(morbid/RE=mTL_miRNA)|BACH1_(morbid/RE=mTL_miRNA)|BAP1_(HI=3/morbid/RE=mTL_miRNA)|BBS5_(morbid/RE=mTL_miRNA)|BCL10_(morbid/RE=mTL_miRNA)|BLOC1S6_(morbid/RE=mTL_miRNA)|BMPR1A_(HI=3/morbid/RE=mTL_miRNA)|BNC2_(morbid/RE=mTL_miRNA)|BRD4_(morbid/RE=mTL_miRNA)|C3_(morbid/RE=mTL_miRNA)|CACNA1C_(morbid/RE=mTL_miRNA)|CAD_(morbid/RE=mTL_miRNA)|CALM3_(morbid/RE=mTL_miRNA)|CAPN15_(morbid/RE=mTL_miRNA)|CAPNS1_(morbid/RE=mTL_miRNA)|CASP14_(morbid/RE=mTL_miRNA)|CBL_(morbid/RE=mTL_miRNA)|CCDC134_(morbid/RE=mTL_miRNA)|CCDC88A_(morbid/RE=mTL_miRNA)|CCND2_(morbid/RE=mTL_miRNA)|CCNQ_(morbid/RE=mTL_miRNA)|CDC42_(morbid/RE=mTL_miRNA)|CEP104_(morbid/RE=mTL_miRNA)|CERS1_(morbid/RE=mTL_miRNA)|CHRDL1_(HI=3/morbid/RE=mTL_miRNA)|CLCC1_(morbid/RE=mTL_miRNA)|CLCN7_(morbid/RE=mTL_miRNA)...;P_gain_phen=22q11.2_recurrent_(DGS/VCFS)_region_(proximal,_A-B)_(includes_TBX1)|Schwannomatosis,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,Schwannomatosis,.,.,.,.,.,.,.,.,.;P_gain_source=CLN:906110|CLN:906111|CLN:917324|TS3:ISCA-37433|dbVar:nssv15121202|dbVar:nssv15132168|dbVar:nssv15132429|dbVar:nssv15132430|dbVar:nssv15132553|dbVar:nssv15132642|nssv15139997|dbVar:nssv15132749|dbVar:nssv15133139|dbVar:nssv15133442|dbVar:nssv15133527|dbVar:nssv15133528|dbVar:nssv15133531|dbVar:nssv15133921|dbVar:nssv15134211|dbVar:nssv15134239|dbVar:nssv15134353|dbVar:nssv15136015|dbVar:nssv15137439|dbVar:nssv15138177|dbVar:nssv15138869|dbVar:nssv15140282|dbVar:nssv15141369|dbVar:nssv15153269|dbVar:nssv15156361|dbVar:nssv15605811|dbVar:nssv15605831|dbVar:nssv15605876|dbVar:nssv15755816|dbVar:nssv16207465|dbVar:nssv16736612|dbVar:nssv16736616|dbVar:nssv18830899|dbVar:nssv18830992,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,CLN:906110|CLN:906111|CLN:917324,.,.,.,.,.,.,.,.,.;P_gain_coord=22:18894836-20311784|22:18894836-21461752|22:18894836-21464119|22:18896973-21440514|22:18900756-21075586|22:18908833-21358123|22:18909039-21440514|22:18909045-21464119|22:18912232-20287208|22:18912515-21431174|22:18916828-21050078|22:18916829-20312661|22:18916843-20311810|22:18916843-20311858|22:18916843-20312661|22:18919943-20311763|22:18919943-20659606|22:18919943-20708934|22:18919943-21440514|22:18923899-21431174|22:18937381-21459713|22:18938162-21455556|22:18950767-21455556|22:18970562-21040836|22:18973253-21435405|22:19168759-20942862|22:20895156-21374512|22:20958985-21379958|22:21044197-21440455|22:21045039-21455556|22:21065883-21440455|22:21081261-21440455|22:21086707-21445960|22:21300291-21331188|22:21344737-21344807|22:21345949-21346047|22:21348439-21348534,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,22:21344737-21344807|22:21345949-21346047|22:21348439-21348534,.,.,.,.,.,.,.,.,.;P_loss_phen=22q11.2_recurrent_(DGS/VCFS)_region_(proximal,_A-B)_(includes_TBX1)|Bernard-Soulier_syndrome,_type_B,_231200_(3)_AR|Giant_platelet_disorder,_isolated,_231200_(3)_AR|Cerebral_dysgenesis,_neuropathy,_ichthyosis,_and_palmoplantar_keratoderma_syndrome,_609528_(3)_AR|Combined_D-2-_and_L-2-hydroxyglutaric_aciduria,_615182_(3)_AR|Myasthenic_syndrome,_congenital,_23,_presynaptic,_618197_(3)_AR|Conotruncal_anomaly_face_syndrome,_217095_(3)|DiGeorge_syndrome,_188400_(3)_AD|Tetralogy_of_Fallot,_187500_(3)_AD|Velocardiofacial_syndrome,_192430_(3)_AD|DiGeorge_syndrome|Gastrointestinal_defects_and_immunodeficiency_syndrome_2,_619708_(3)_AR|Polymicrogyria,_perisylvian,_with_cerebellar_hypoplasia_and_arthrogryposis,_616531_(3)_AR|Spastic_paraplegia_84,_AR,_619621_(3)_AR|Hyperprolinemia,_type_I,_239500_(3)_AR|Schizophrenia,_susceptibility_to,_4,_600850_(3)_AD|Meier-Gorlin_syndrome_7,_617063_(3)_AR|Metabolic_encephalomyopathic_crises,_recurrent,_with_rhabdomyolysis,_cardiac_arrhythmias,_and_neurodegeneration,_616878_(3)_AR|Noonan_syndrome_10,_616564_(3)_AD|Noonan_syndrome_2,_605275_(3)_AR|Schwannomatosis-2,_susceptibility_to,_615670_(3)_AD|Recurrent_metabolic_encephalomyopathic_crises-rhabdomyolysis-cardiac_arrhythmia-intellectual_disability_syndrome|Intellectual_disability|Acute_rhabdomyolysis|Episodic_flaccid_weakness|Seizure|Cardiac_arrhythmia|Thrombophilia_10_due_to_heparin_cofactor_II_deficiency,_612356_(3)_AD|Van_den_Ende-Gupta_syndrome,_600920_(3)_AR,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,Meier-Gorlin_syndrome_7,_617063_(3)_AR,.,.,.,Bernard-Soulier_syndrome,_type_B,_231200_(3)_AR|Giant_platelet_disorder,_isolated,_231200_(3)_AR,Bernard-Soulier_syndrome,_type_B,_231200_(3)_AR|Giant_platelet_disorder,_isolated,_231200_(3)_AR,Conotruncal_anomaly_face_syndrome,_217095_(3)|DiGeorge_syndrome,_188400_(3)_AD|Tetralogy_of_Fallot,_187500_(3)_AD|Velocardiofacial_syndrome,_192430_(3)_AD|DiGeorge_syndrome,.,.,.,.,.,.,Metabolic_encephalomyopathic_crises,_recurrent,_with_rhabdomyolysis,_cardiac_arrhythmias,_and_neurodegeneration,_616878_(3)_AR|Recurrent_metabolic_encephalomyopathic_crises-rhabdomyolysis-cardiac_arrhythmia-intellectual_disability_syndrome|Intellectual_disability|Acute_rhabdomyolysis|Episodic_flaccid_weakness|Seizure|Cardiac_arrhythmia,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,Van_den_Ende-Gupta_syndrome,_600920_(3)_AR,.,.,.,.,Gastrointestinal_defects_and_immunodeficiency_syndrome_2,_619708_(3)_AR|Polymicrogyria,_perisylvian,_with_cerebellar_hypoplasia_and_arthrogryposis,_616531_(3)_AR|Spastic_paraplegia_84,_AR,_619621_(3)_AR|Thrombophilia_10_due_to_heparin_cofactor_II_deficiency,_612356_(3)_AD,Thrombophilia_10_due_to_heparin_cofactor_II_deficiency,_612356_(3)_AD,Cerebral_dysgenesis,_neuropathy,_ichthyosis,_and_palmoplantar_keratoderma_syndrome,_609528_(3)_AR,.,.,.,Noonan_syndrome_10,_616564_(3)_AD|Noonan_syndrome_2,_605275_(3)_AR|Schwannomatosis-2,_susceptibility_to,_615670_(3)_AD,.,.,.,.,.,.,.,.,.;P_loss_hpo=HP:0000730|HP:0001249|HP:0001250|HP:0001267|HP:0001275|HP:0001286|HP:0001303|HP:0001656|HP:0001661|HP:0001665|HP:0001666|HP:0001687|HP:0001721|HP:0002122|HP:0002125|HP:0002182|HP:0002192|HP:0002279|HP:0002306|HP:0002316|HP:0002348|HP:0002382|HP:0002386|HP:0002391|HP:0002402|HP:0002417|HP:0002430|HP:0002431|HP:0002432|HP:0002434|HP:0002437|HP:0002458|HP:0002466|HP:0002479|HP:0002482|HP:0002499|HP:0002543|HP:0002794|HP:0003752|HP:0003767|HP:0004351|HP:0005158|HP:0006833|HP:0006997|HP:0007154|HP:0007176|HP:0007180|HP:0008942|HP:0010520|HP:0011675,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,HP:0000730|HP:0001249|HP:0001250|HP:0001267|HP:0001275|HP:0001286|HP:0001303|HP:0001656|HP:0001661|HP:0001665|HP:0001666|HP:0001687|HP:0001721|HP:0002122|HP:0002125|HP:0002182|HP:0002192|HP:0002279|HP:0002306|HP:0002316|HP:0002348|HP:0002382|HP:0002386|HP:0002391|HP:0002402|HP:0002417|HP:0002430|HP:0002431|HP:0002432|HP:0002434|HP:0002437|HP:0002458|HP:0002466|HP:0002479|HP:0002482|HP:0002499|HP:0002543|HP:0002794|HP:0003752|HP:0003767|HP:0004351|HP:0005158|HP:0006833|HP:0006997|HP:0007154|HP:0007176|HP:0007180|HP:0008942|HP:0010520|HP:0011675,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.;P_loss_source=CLN:226591|CLN:2871255|CLN:959024|HI3:ISCA-37433|dbVar:nssv15119864|dbVar:nssv15120710|dbVar:nssv15124351|dbVar:nssv15124515|dbVar:nssv15129189|dbVar:nssv15130834|dbVar:nssv15130929|dbVar:nssv15131088|dbVar:nssv15131611|dbVar:nssv15132323|nssv15139981|dbVar:nssv15132334|dbVar:nssv15132747|dbVar:nssv15132748|dbVar:nssv15132933|dbVar:nssv15132934|dbVar:nssv15132935|dbVar:nssv15132939|dbVar:nssv15133099|dbVar:nssv15133185|dbVar:nssv15133186|dbVar:nssv15133443|dbVar:nssv15133817|dbVar:nssv15134350|nssv15139984|dbVar:nssv15134354|dbVar:nssv15134360|dbVar:nssv15134361|dbVar:nssv15134635|dbVar:nssv15134703|dbVar:nssv15134820|dbVar:nssv15134849|dbVar:nssv15136233|dbVar:nssv15137726|dbVar:nssv15137759|dbVar:nssv15137802|dbVar:nssv15138106|dbVar:nssv15138475|dbVar:nssv15139405|dbVar:nssv15139434|dbVar:nssv15139445|nssv15774763|dbVar:nssv15139759|dbVar:nssv15140043|dbVar:nssv15140048|dbVar:nssv15140057|dbVar:nssv15141198|dbVar:nssv15141722|dbVar:nssv15142496|dbVar:nssv15143197|dbVar:nssv15143645|dbVar:nssv15144279|dbVar:nssv15144449|dbVar:nssv15153165|dbVar:nssv15154011|dbVar:nssv15155693|dbVar:nssv15156360|dbVar:nssv15162020|dbVar:nssv15162021|dbVar:nssv15605807|dbVar:nssv15605829|dbVar:nssv15605830|nssv16216546|dbVar:nssv15605834|dbVar:nssv15755310|dbVar:nssv15755712|dbVar:nssv15755812|dbVar:nssv15770037|dbVar:nssv15770783|dbVar:nssv15770877|dbVar:nssv15772938|nssv15773614|nssv15775115|nssv15775184|nssv15775592|dbVar:nssv15772982|dbVar:nssv15775129|dbVar:nssv15776509|dbVar:nssv15776863|dbVar:nssv15776865|dbVar:nssv15776871|dbVar:nssv16208595|dbVar:nssv16208596|dbVar:nssv16212111|dbVar:nssv16213307|dbVar:nssv16213808|dbVar:nssv16214784|dbVar:nssv16215255|dbVar:nssv16215257|dbVar:nssv16216543|dbVar:nssv16216544|nssv8639845|nssv15161831|dbVar:nssv16254574|dbVar:nssv16254739|dbVar:nssv16255831|dbVar:nssv16736634|dbVar:nssv17171460|nssv17974163|dbVar:nssv17171461|dbVar:nssv17171462|dbVar:nssv17171559|dbVar:nssv17171582|dbVar:nssv17171772|dbVar:nssv17649936|dbVar:nssv17649973|dbVar:nssv17955605|dbVar:nssv17955606|dbVar:nssv17955868|dbVar:nssv17970829|dbVar:nssv17971092|dbVar:nssv17971094|dbVar:nssv17971356|dbVar:nssv17971399|dbVar:nssv17977042|dbVar:nssv18329601|dbVar:nssv18329824|dbVar:nssv18330264|dbVar:nssv18330322|dbVar:nssv18330820|dbVar:nssv18786380|dbVar:nssv18790095|dbVar:nssv18792883|dbVar:nssv18841927|nssv18830898|dbVar:nssv8639589|nssv15122532|morbid:CDC45|morbid:GP1BB|morbid:LZTR1|morbid:PI4KA|morbid:PRODH|morbid:SCARF2|morbid:SERPIND1|morbid:SLC25A1|morbid:SNAP29|morbid:TANGO2|morbid:TBX1,.,dbVar:nssv17649973|dbVar:nssv17971399,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,dbVar:nssv15124515|morbid:CDC45,.,.,.,dbVar:nssv17977042|morbid:GP1BB,dbVar:nssv17977042|morbid:GP1BB,CLN:959024|morbid:TBX1,.,.,.,.,.,.,CLN:226591|dbVar:nssv15770877|dbVar:nssv15772938|nssv15773614|nssv15775115|nssv15775184|nssv15775592|dbVar:nssv15772982|dbVar:nssv15775129|dbVar:nssv16216543|dbVar:nssv17171772|dbVar:nssv17971094|dbVar:nssv18790095|dbVar:nssv8639589|nssv15122532|morbid:TANGO2,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,morbid:SCARF2,.,.,.,.,morbid:PI4KA|morbid:SERPIND1,morbid:SERPIND1,morbid:SNAP29,.,.,.,CLN:2871255|dbVar:nssv17171582|dbVar:nssv17971092|morbid:LZTR1,.,.,.,.,.,.,.,.,.;P_loss_coord=22:18894836-20238206|22:18894836-20311763|22:18894836-20659606|22:18894836-21440514|22:18894836-21461752|22:18894836-21461811|22:18894836-21464119|22:18896973-20311763|22:18896973-21382953|22:18896973-21440514|22:18899288-18925066|22:18900294-18924066|22:18900295-18923806|22:18900443-21440514|22:18900669-18923820|22:18900669-19747220|22:18900669-19770565|22:18900689-21351637|22:18900896-18923882|22:18901005-21408430|22:18905110-19015451|22:18910311-18923800|22:18910311-18923820|22:18910311-19770565|22:18912232-20287208|22:18912404-21431174|22:18912871-21431174|22:18915348-21463730|22:18916828-20311858|22:18916829-20312661|22:18916829-21041014|22:18916829-21049800|22:18916843-19004772|22:18916843-20310938|22:18916843-20311858|22:18916843-20312661|22:18916843-20716903|22:18916843-20767095|22:18916843-21011216|22:18916843-21033371|22:18916843-21075592|22:18916844-20311858|22:18916844-21033401|22:18916844-21075592|22:18918742-20311922|22:18919580-21460595|22:18919943-20311763|22:18919943-20659606|22:18919943-20708934|22:18919943-21025713|22:18919943-21440514|22:18922152-21449911|22:18938162-20229017|22:18938162-20996250|22:18938162-21455556|22:18962314-21455556|22:18973253-21435405|22:18999804-21455499|22:18999804-21455556|22:19016664-21463730|22:19023802-21440455|22:19023802-21440514|22:19035018-21461811|22:19035324-21464119|22:19036287-21208284|22:19058830-21440514|22:19156118-19529130|22:19163094-19166249|22:19163624-19770565|22:19184001-21416024|22:19336599-21208828|22:19467443-19508131|22:19470352-19481849|22:19647906-21153690|22:19709401-21142058|22:19709436-19712313|22:19709952-19963280|22:19710419-21142058|22:19711062-19712294|22:19711829-19711877|22:19743227-19755855|22:19743425-19747210|22:19743425-19754400|22:19743425-19770565|22:19743474-19747220|22:19747168-19754390|22:19748301-19754857|22:19748451-19748647|22:20008633-20054687|22:20027161-20063237|22:20028564-20053554|22:20028990-20062723|22:20028993-20062955|22:20029136-20062954|22:20029701-20062756|22:20030823-20041691|22:20030823-20053554|22:20030859-20052185|22:20030879-20049206|22:20030879-20052185|22:20036383-20045782|22:20036384-20045781|22:20036385-20045784|22:20039969-20043556|22:20708891-21407690|22:20718171-21427936|22:20733496-21463730|22:20745763-21460658|22:20754408-21440515|22:20754408-21457610|22:20754423-21461752|22:20778874-20792112|22:20921343-21459713|22:21061979-21213099|22:21062169-21463730|22:21062567-21463730|22:21065883-21455556|22:21067570-21414817|22:21069074-21463730|22:21074921-21440514|22:21075576-21454721|22:21081285-21457610|22:21128401-21142008|22:21213295-21245502|22:21335907-21346541|22:21336586-21353321|22:21336662-21337398|22:21336662-21351637|22:21348908-21348985,.,22:18900295-18923806|22:18910311-18923800,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,22:19467443-19508131|22:19470352-19481849,.,.,.,22:19711062-19712294|22:19711829-19711877,22:19711062-19712294|22:19711829-19711877,22:19748301-19754857|22:19748451-19748647,.,.,.,.,.,.,22:20008633-20054687|22:20028564-20053554|22:20030823-20041691|22:20030823-20053554|22:20030859-20052185|22:20030879-20049206|22:20030879-20052185|22:20036383-20045782|22:20036384-20045781|22:20036385-20045784|22:20039969-20043556,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,22:20778874-20792112,.,.,.,.,22:21061979-21213099|22:21128401-21142008,22:21128401-21142008,22:21213295-21245502,.,.,.,22:21336586-21353321|22:21336662-21337398|22:21336662-21351637|22:21348908-21348985,.,.,.,.,.,.,.,.,.;P_ins_source=CLN:1349334|dbVar:nssv17974796,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,CLN:1349334|dbVar:nssv17974796,.,.,.,.,.,.,.,.,.;P_ins_coord=22:21337344-21337343|22:21337344-21337456,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,22:21337344-21337343|22:21337344-21337456,.,.,.,.,.,.,.,.,.;po_P_gain_phen=22q11.2_recurrent_(DGS/VCFS)_region_(proximal,_A-D)_(includes_TBX1);po_P_gain_source=dbVar:nssv15161990|dbVar:nssv15139753|dbVar:nssv15150031|dbVar:nssv15150491|dbVar:nssv15146973|dbVar:nssv15135173|dbVar:nssv15137211|dbVar:nssv15129128|dbVar:nssv15161991|dbVar:nssv15161992|dbVar:nssv15164031|dbVar:nssv16254742|dbVar:nssv16297047|dbVar:nssv15151140|nssv16207460|dbVar:nssv15141953|dbVar:nssv15156366|nssv15772157|dbVar:nssv17976875|dbVar:nssv16207463|dbVar:nssv16296938|dbVar:nssv16207464|dbVar:nssv15774756|dbVar:nssv18329565|dbVar:nssv15149512|nssv15150794|dbVar:nssv15139758|dbVar:nssv15755803|dbVar:nssv15774287|dbVar:nssv15605979|dbVar:nssv15139756|dbVar:nssv15605980|dbVar:nssv15137771|dbVar:nssv15132295|dbVar:nssv15133039|dbVar:nssv15133301|dbVar:nssv15132518|dbVar:nssv15134365|dbVar:nssv15146613|dbVar:nssv15133111|dbVar:nssv15147269|dbVar:nssv15121201|dbVar:nssv15136264|dbVar:nssv15605803|dbVar:nssv15605804|dbVar:nssv16736606|dbVar:nssv15128891|dbVar:nssv15126571|dbVar:nssv15128500|dbVar:nssv16254735|dbVar:nssv15140068|dbVar:nssv15137505|dbVar:nssv15128758|dbVar:nssv15152138|dbVar:nssv15154014|dbVar:nssv15755815|dbVar:nssv15755817|dbVar:nssv16255668|dbVar:nssv18329661|dbVar:nssv18330205|dbVar:nssv15156359|dbVar:nssv15142823|dbVar:nssv15140066|dbVar:nssv15133432|dbVar:nssv15605805|dbVar:nssv15605808|dbVar:nssv15605806|dbVar:nssv15132858|dbVar:nssv15133520|dbVar:nssv15132127|dbVar:nssv15133128|dbVar:nssv15136566|dbVar:nssv15133389|dbVar:nssv15140044|dbVar:nssv15133925|dbVar:nssv15138146|dbVar:nssv15133393|nssv15139545|dbVar:nssv15135020|dbVar:nssv15132566|dbVar:nssv15164039|dbVar:nssv17955656|dbVar:nssv15132423|dbVar:nssv15132330|dbVar:nssv15126758|dbVar:nssv15127771|dbVar:nssv15126436|dbVar:nssv17649918|dbVar:nssv15162011|dbVar:nssv15125959|dbVar:nssv17955842|dbVar:nssv15139556|dbVar:nssv15122631|dbVar:nssv15123767|dbVar:nssv15162014|dbVar:nssv15143627|dbVar:nssv16865904|dbVar:nssv15123759|dbVar:nssv17650003|dbVar:nssv15755805|dbVar:nssv15132167|dbVar:nssv15133526|dbVar:nssv15162019|dbVar:nssv15145463|dbVar:nssv15145234|dbVar:nssv16207634|dbVar:nssv15605810|dbVar:nssv15605809|dbVar:nssv18842027|dbVar:nssv18842024|nssv18842046|dbVar:nssv18326316|dbVar:nssv15139749|dbVar:nssv15140369|dbVar:nssv15136643|dbVar:nssv15131931|nssv15133075|dbVar:nssv15131925|dbVar:nssv15134715|dbVar:nssv15132426|TS3:ISCA-37446|dbVar:nssv15605828|dbVar:nssv15153271|dbVar:nssv17976874|dbVar:nssv15139887|dbVar:nssv15137698|dbVar:nssv15139242|dbVar:nssv18329574|dbVar:nssv18329591|dbVar:nssv17976884|dbVar:nssv15132247|nssv15139527|dbVar:nssv15131997|nssv15139348|dbVar:nssv15137835|dbVar:nssv15132026|nssv15139977|dbVar:nssv15127741|dbVar:nssv18830785|dbVar:nssv15154013|dbVar:nssv16254573|dbVar:nssv16255670|dbVar:nssv15133914|dbVar:nssv15145464|dbVar:nssv15755306|dbVar:nssv15132169|dbVar:nssv17976883|dbVar:nssv16207466|dbVar:nssv15132044|dbVar:nssv15139694|dbVar:nssv15120579|dbVar:nssv15133646|dbVar:nssv15139596|dbVar:nssv15132083|dbVar:nssv18330192|dbVar:nssv15139716|dbVar:nssv15135998|dbVar:nssv15139748;po_P_gain_coord=22:16054668-51243435|22:16054692-27296513|22:16054692-51220902|22:16054692-51237463|22:16054692-51237518|22:16087695-19010508|22:16087695-20311784|22:16114245-18917748|22:16114245-20737903|22:16114245-51195728|22:16114245-51211392|22:16197006-51224252|22:16800001-21500000|22:16888900-18916828|22:16888900-20311858|22:16888900-20312661|22:16888900-21915509|22:16888900-22290476|22:16888900-26483608|22:16888900-27657507|22:16888900-51197838|22:16888901-18916828|22:16888901-51197838|22:17012936-21431054|22:17041670-20247250|22:17055734-20312661|22:17072087-20130474|22:17264512-23238029|22:17289828-20311922|22:17397499-18984519|22:17397499-20311763|22:17397499-20659606|22:17397499-20708934|22:17397499-21505417|22:17397499-24754904|22:17397499-51178264|22:17397634-19584890|22:17397634-51178213|22:18533255-18942804|22:18570313-19184416|22:18609713-21408430|22:18611224-21408430|22:18628020-20311763|22:18628133-21712996|22:18628133-21900562|22:18628133-51244566|22:18628148-21722313|22:18637140-20289862|22:18640730-21465659|22:18641480-21917191|22:18644791-21465659|22:18645354-21465659|22:18648856-21461017|22:18648856-21927646|22:18648867-21465659|22:18648868-20311858|22:18648868-21798907|22:18649190-20311858|22:18650665-21440455|22:18650665-21440514|22:18650676-21455556|22:18650746-21460220|22:18650804-21386010|22:18650804-21460220|22:18651615-21440455|22:18652638-21914178|22:18660554-21455556|22:18661700-21505445|22:18661700-22905025|22:18661725-20311763|22:18661725-21025713|22:18661725-21440514|22:18661725-21461752|22:18661725-21505417|22:18661725-21661435|22:18661725-32217179|22:18675474-21465050|22:18687211-19060954|22:18704555-21411284|22:18706002-21440514|22:18713492-20412989|22:18713492-21712996|22:18713492-21917191|22:18841375-21465101|22:18844633-21463730|22:18848021-21468378|22:18873002-21469900|22:18874966-21028946|22:18877788-20306993|22:18877788-21462353|22:18878410-21467387|22:18886916-20278471|22:18886916-21461017|22:18886916-23421058|22:18889978-21463189|22:18890265-21464056|22:18890272-21505417|22:18890272-21561514|22:18891399-21463730|22:18891967-20311852|22:18891967-21631412|22:18892576-20306993|22:18892576-20308800|22:18892576-21460220|22:18893839-20508931|22:18893839-21416074|22:18893889-21414817|22:18894340-21032422|22:18894340-21440455|22:18894821-21505445|22:18894836-21505417|22:18894836-21561514|22:18894836-21809009|22:18909039-21798755|22:18912232-21465672|22:18912515-21922035|22:18916828-21465659|22:18916828-21804886|22:18916829-21465659|22:18916829-21465662|22:18916843-21465659|22:18916844-21798907|22:18916844-21804563|22:18917048-21465659|22:18919943-21505417|22:18919943-21561514|22:18919943-21801604|22:18919943-21809009|22:18919988-21561468|22:18936190-21464809|22:18970561-21465662|22:19024657-21465662|22:19035090-22672555|22:19058830-21561514|22:19346606-21864619|22:19819478-21464764|22:20402634-21561514|22:20732809-21465659|22:20732809-25193541|22:20748977-21499971|22:20754423-21505417|22:21022841-22712836|22:21025655-21505417|22:21025655-22336268|22:21025655-22400806|22:21029657-22485776|22:21081261-21505417|22:21261515-37583387|22:21400684-23654222;po_P_gain_percent=7.30|22.85|7.31|7.30|7.30|3.96|33.54|0.82|39.86|7.32|7.32|7.34|54.67|1.08|41.40|41.41|51.11|47.57|26.78|23.86|7.49|1.08|7.49|57.40|42.19|43.53|40.40|43.01|46.89|5.65|48.62|54.10|54.78|62.54|34.92|7.61|31.55|7.61|11.71|47.16|89.81|89.86|84.15|83.29|78.51|7.88|83.04|84.41|90.95|78.43|91.08|91.10|91.25|78.36|91.21|85.21|81.56|85.23|91.25|91.25|91.30|91.31|91.08|91.31|91.28|78.78|91.62|90.35|60.55|85.87|90.14|91.61|91.67|90.35|85.65|18.95|92.10|44.45|92.97|93.09|89.33|85.66|80.20|97.92|98.08|98.05|98.94|99.08|98.81|99.34|99.24|99.43|99.69|56.67|99.81|99.82|98.25|96.18|99.87|99.80|93.79|99.84|99.84|99.91|99.94|99.96|99.96|99.98|99.98|98.42|98.42|96.35|88.17|88.42|99.94|84.78|99.94|88.20|99.94|99.94|99.94|88.38|88.21|99.94|98.40|96.31|88.29|88.06|96.31|99.97|99.94|99.94|66.78|96.11|84.09|99.96|91.60|99.79|16.39|95.23|94.50|26.11|91.39|33.45|31.88|29.84|90.26|1.24|2.81;po_P_loss_phen=22q11.2_recurrent_(DGS/VCFS)_region_(proximal,_A-D)_(includes_TBX1);po_P_loss_source=dbVar:nssv15134634|dbVar:nssv16208592|dbVar:nssv16208593|dbVar:nssv15141423|dbVar:nssv15132388|dbVar:nssv15128094|dbVar:nssv15132068|dbVar:nssv15133055|dbVar:nssv18787557|nssv18791888|dbVar:nssv16207650|dbVar:nssv15153272|dbVar:nssv15135754|dbVar:nssv15133431|nssv15139986|dbVar:nssv15125556|dbVar:nssv15126775|dbVar:nssv15133864|dbVar:nssv15755811|dbVar:nssv15755813|dbVar:nssv18326404|dbVar:nssv15126915|dbVar:nssv15128185|dbVar:nssv15145459|dbVar:nssv15145460|dbVar:nssv15138286|dbVar:nssv15154015|nssv18326430|dbVar:nssv18330227|dbVar:nssv17976889|dbVar:nssv17976891|dbVar:nssv15153273|dbVar:nssv18330460|dbVar:nssv17976888|dbVar:nssv15145461|dbVar:nssv15138328|dbVar:nssv17976880|dbVar:nssv15154017|dbVar:nssv18329577|dbVar:nssv15140316|dbVar:nssv15133433|dbVar:nssv18326382|dbVar:nssv17955872|dbVar:nssv15133434|dbVar:nssv16255835|dbVar:nssv15132708|dbVar:nssv15134184|dbVar:nssv15132128|nssv15139349|dbVar:nssv15134982|dbVar:nssv15135883|dbVar:nssv15133394|nssv16091745|dbVar:nssv15132006|nssv15139990|dbVar:nssv15137884|dbVar:nssv15133435|dbVar:nssv18792765|dbVar:nssv15135454|dbVar:nssv15133438|nssv15140028|dbVar:nssv15132230|nssv15139684|dbVar:nssv15132655|nssv15139976|dbVar:nssv15136079|dbVar:nssv15132507|nssv15139975|dbVar:nssv15132389|dbVar:nssv17976452|dbVar:nssv15164040|dbVar:nssv15137872|dbVar:nssv16254738|dbVar:nssv15127636|dbVar:nssv15128166|dbVar:nssv15127784|dbVar:nssv16208773|dbVar:nssv15145231|dbVar:nssv15145040|dbVar:nssv18786377|dbVar:nssv15145232|dbVar:nssv15139558|dbVar:nssv15163611|dbVar:nssv16215256|dbVar:nssv15128065|dbVar:nssv17955534|dbVar:nssv15163612|dbVar:nssv15145462|dbVar:nssv15145233|dbVar:nssv15163613|dbVar:nssv15132390|dbVar:nssv15163614|dbVar:nssv15162012|dbVar:nssv15139255|dbVar:nssv15162013|dbVar:nssv15162015|dbVar:nssv17976449|dbVar:nssv17955549|dbVar:nssv15162016|nssv16215222|nssv16215239|nssv16865884|dbVar:nssv15162017|dbVar:nssv15164042|dbVar:nssv15143222|dbVar:nssv15162018|dbVar:nssv16865881|dbVar:nssv15164043|dbVar:nssv15755824|dbVar:nssv17650004|dbVar:nssv17649858|dbVar:nssv16297048|dbVar:nssv17517456|dbVar:nssv15141730|dbVar:nssv15126093|dbVar:nssv15125439|dbVar:nssv15755804|dbVar:nssv15121171|dbVar:nssv15133439|dbVar:nssv15132392|dbVar:nssv15132132|dbVar:nssv15133440|dbVar:nssv15136213|dbVar:nssv15605874|nssv15605879|dbVar:nssv17976881|dbVar:nssv15119655|dbVar:nssv18842051|dbVar:nssv17173212|dbVar:nssv17173202|dbVar:nssv18792648|dbVar:nssv16091922|dbVar:nssv15143862|dbVar:nssv17976675|dbVar:nssv18830700|dbVar:nssv18786378|dbVar:nssv18786379|dbVar:nssv15140698|dbVar:nssv15139562|dbVar:nssv15140747|dbVar:nssv15140051|dbVar:nssv15133317|nssv15143213|dbVar:nssv15131926|dbVar:nssv15605919|dbVar:nssv15755810|HI3:ISCA-37446|dbVar:nssv15139269|dbVar:nssv15137499|dbVar:nssv15138712|dbVar:nssv18330193|dbVar:nssv15139855|nssv18326386|dbVar:nssv15139854|nssv15153270|dbVar:nssv15154016|nssv17976890|dbVar:nssv15152149|dbVar:nssv15137491|dbVar:nssv18330326|dbVar:nssv18329598|dbVar:nssv18330218|dbVar:nssv15141653|dbVar:nssv15142207|dbVar:nssv15755814|dbVar:nssv15132248|nssv15139690|dbVar:nssv15134351|dbVar:nssv15132463|nssv15139699|dbVar:nssv15132523|dbVar:nssv15155695|dbVar:nssv18831006|dbVar:nssv17976279|dbVar:nssv15139289|dbVar:nssv15139467|dbVar:nssv15142401|dbVar:nssv15134356|dbVar:nssv18330006|dbVar:nssv15137446|dbVar:nssv17976741|dbVar:nssv15153268|dbVar:nssv15156357|dbVar:nssv18842023|dbVar:nssv15132608|dbVar:nssv15145465|dbVar:nssv15145466|dbVar:nssv15145235|dbVar:nssv15772502|dbVar:nssv15154008|dbVar:nssv15156354|dbVar:nssv15755308|nssv15755309|dbVar:nssv15155696|dbVar:nssv18330327|dbVar:nssv18326378|dbVar:nssv18329593|dbVar:nssv18330275|dbVar:nssv18329587|dbVar:nssv18329620|dbVar:nssv17956682|dbVar:nssv15776637|dbVar:nssv17649919|dbVar:nssv18326434|dbVar:nssv18326440|dbVar:nssv15120712|dbVar:nssv15139564|dbVar:nssv16208598|dbVar:nssv15755307|dbVar:nssv15156347|dbVar:nssv18330257|dbVar:nssv15755311|dbVar:nssv17957425|dbVar:nssv15121593|dbVar:nssv15154007|dbVar:nssv15134856|dbVar:nssv18330729|dbVar:nssv18330196|dbVar:nssv17977102;po_P_loss_coord=22:16087695-19363465|22:16888900-20125005|22:16888900-20730144|22:16888901-20026751|22:17019016-20718227|22:17177912-19892632|22:17397499-20311763|22:17397499-20708934|22:17565983-20052185|22:18475386-23764120|22:18626109-21800797|22:18628020-21464119|22:18628020-21505417|22:18628133-21561468|22:18628133-21883879|22:18628148-21440515|22:18631365-21800471|22:18636750-21800471|22:18639781-21910280|22:18641480-21712996|22:18641480-21722262|22:18642647-21717111|22:18642647-21742277|22:18644242-21465662|22:18644543-21465659|22:18644544-21800797|22:18644791-21798907|22:18644791-21800471|22:18644791-21915509|22:18644792-21041014|22:18645354-21800797|22:18646694-21631412|22:18648857-21465662|22:18648867-21798907|22:18648867-21800797|22:18648868-21465659|22:18650665-21440455|22:18650676-21455556|22:18655799-21726191|22:18660136-21737597|22:18660554-21455556|22:18661700-21457610|22:18661700-21505445|22:18661725-20659606|22:18661725-21440514|22:18661725-21461811|22:18661725-21464119|22:18661725-21505417|22:18661725-21561514|22:18661725-21809009|22:18671630-21536841|22:18689517-21588615|22:18706002-20311763|22:18706002-20659606|22:18706002-21025713|22:18706002-21440514|22:18706002-21464119|22:18706002-21505417|22:18706002-21809009|22:18718029-21326012|22:18728119-21811991|22:18765086-21661435|22:18765103-21661435|22:18788000-21065894|22:18788000-21468378|22:18788000-21684798|22:18789966-21591197|22:18790223-21697998|22:18820423-21477877|22:18834446-21414817|22:18834453-21575702|22:18844633-21463730|22:18844633-21608479|22:18844633-21797812|22:18848021-21468378|22:18861210-21630630|22:18861749-21463730|22:18868433-20331055|22:18868433-21477877|22:18872509-21465050|22:18874457-20306317|22:18875870-21470273|22:18875957-21466715|22:18876631-21465659|22:18878410-21465050|22:18878410-21907671|22:18884515-21484289|22:18884715-21483289|22:18886916-21463730|22:18886916-21465050|22:18886916-21467387|22:18886916-21811991|22:18889491-20312668|22:18889491-21463730|22:18889491-21466715|22:18889491-21917190|22:18889572-21464697|22:18889694-21465485|22:18889951-21466053|22:18889970-21462658|22:18890043-21440455|22:18890163-21464056|22:18890222-21561468|22:18890265-21540347|22:18890272-18999862|22:18890272-20328113|22:18890272-20659606|22:18890272-21394730|22:18890272-21461811|22:18891527-21796215|22:18892576-21460220|22:18893345-21650280|22:18893736-18924066|22:18893839-20307561|22:18893883-21563420|22:18893883-21571027|22:18893887-21386103|22:18893888-18923800|22:18893889-18973671|22:18893889-21414817|22:18893889-21481925|22:18893889-21570386|22:18894079-21414817|22:18894340-20255110|22:18894340-20255154|22:18894340-21440455|22:18894340-21440514|22:18894836-21505417|22:18894836-21561514|22:18900756-21800277|22:18912232-21465672|22:18912232-21465672|22:18916828-21465662|22:18916829-21465659|22:18916829-21465662|22:18916829-21800797|22:18916843-21465659|22:18916843-21465662|22:18916843-21798907|22:18916843-21804716|22:18916843-21804886|22:18916844-21465659|22:18916844-21800471|22:18916844-21915509|22:18917048-21465659|22:18917048-21465662|22:18919478-21800471|22:18919943-21505417|22:18919943-21505558|22:18919943-21561514|22:18919943-21809009|22:18935464-21465659|22:18936190-21464809|22:18936191-21464809|22:18970562-21465662|22:19024657-21465659|22:19024658-21465662|22:19029603-21505417|22:19046678-21465662|22:20279767-23822986|22:20310411-21804886|22:20311904-21465659|22:20311904-21800797|22:20609933-21576553|22:20659548-21561514|22:20703817-21503296|22:20703817-21631412|22:20713276-21477877|22:20716877-21465659|22:20716877-21465662|22:20716877-21798907|22:20716877-21800471|22:20716877-23819697|22:20716878-21465659|22:20725309-21465659|22:20725310-21804563|22:20725319-21800797|22:20728958-21798907|22:20728958-21800797|22:20728958-21915096|22:20729389-21465662|22:20730997-21465342|22:20732809-21465659|22:20732809-21800471|22:20733428-21505417|22:20749626-23972878|22:21029656-22481498|22:21033587-21800471|22:21049800-21465662|22:21049801-21465662|22:21059670-21800471|22:21059670-21804716|22:21065883-21937680|22:21075676-21465662|22:21081261-24593820|22:21092649-21465662|22:21188488-21804597|22:21462567-22962196;po_P_loss_percent=14.31|38.01|47.78|36.07|49.29|36.76|48.62|54.78|46.55|48.58|80.93|90.59|89.29|87.59|78.92|90.52|81.07|81.21|78.56|83.65|83.40|83.57|82.89|91.06|91.07|81.40|81.46|81.42|78.55|89.57|81.42|86.08|91.21|81.56|81.51|91.21|91.25|91.30|83.68|83.49|91.62|91.66|90.35|88.33|91.61|91.67|91.68|90.35|88.60|81.63|89.67|88.62|88.24|90.33|91.86|93.09|93.15|91.78|82.80|93.22|83.31|88.71|88.71|95.31|95.86|88.69|91.72|88.36|96.68|97.66|93.73|98.08|92.96|87.00|98.05|92.77|98.73|98.19|98.46|99.10|98.58|99.03|99.17|99.24|99.33|84.82|98.83|98.87|99.69|99.66|99.57|87.84|99.62|99.79|99.69|84.86|99.77|99.75|99.74|99.81|99.81|99.82|96.18|96.95|95.84|99.68|99.74|99.82|99.82|88.45|99.91|93.19|96.37|99.93|96.24|95.97|99.96|96.83|98.81|99.96|99.28|95.99|99.97|99.96|99.96|99.98|99.98|98.42|96.35|88.41|99.94|99.94|99.94|99.94|99.94|88.33|99.94|99.94|88.38|88.21|88.20|99.94|88.34|84.95|99.94|99.94|88.33|98.40|98.40|96.31|88.06|99.94|99.97|99.97|99.94|99.94|99.94|98.33|99.94|33.43|77.20|99.87|77.39|88.37|89.20|95.10|81.96|98.20|99.79|99.79|69.06|68.96|24.08|99.79|99.79|68.46|68.70|68.71|68.59|61.98|99.79|99.83|99.79|68.50|94.65|22.17|29.92|56.14|99.63|99.63|54.60|54.29|45.68|99.60|10.90|99.59|44.74|0.10;P_snvindel_nb=626,.,11,.,.,.,.,.,.,.,.,.,9,.,.,.,.,.,.,10,3,.,.,8,8,27,.,.,.,1,.,.,27,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,3,.,.,.,.,8,.,15,.,.,.,502,.,.,.,.,.,.,.,.,.;P_snvindel_phen=2-hydroxyglutaric_aciduria|Abnormality_of_metabolism/homeostasis|Acute_rhabdomyolysis|Autism_spectrum_disorder|Bardet-Biedl_syndrome|Bernard_Soulier_syndrome|CEDNIK_syndrome|CLDN5-related_neurodevelopmental_disorder|CLDN5_deficiency|Cardiac_arrhythmia|Cardiovascular_phenotype|D,L-2-hydroxyglutaric_aciduria|DiGeorge_syndrome|Emery-Dreifuss_muscular_dystrophy|Episodic_flaccid_weakness|Hereditary_cancer-predisposing_syndrome|Hypertrophic_cardiomyopathy_1|Hypomyelinating_leukodystrophy_2|Inborn_genetic_diseases|Intellectual_disability|LZTR1-related_disorder|LZTR1-related_schwannomatosis|Male_infertility_with_azoospermia_or_oligozoospermia_due_to_single_gene_mutation|Meier-Gorlin_syndrome_7|Metabolic_crises_with_rhabdomyolysis,_cardiac_arrhythmias,_and_neurodegeneration|Myasthenic_syndrome,_congenital,_23,_presynaptic|Neurodevelopmental_disorder|Noonan_syndrome|Noonan_syndrome_1|Noonan_syndrome_10|Noonan_syndrome_2|Noonan_syndrome_and_Noonan-related_syndrome|PI4KA-related_disorder|Polymicrogyria,_perisylvian,_with_cerebellar_hypoplasia_and_arthrogryposis|Proline_dehydrogenase_deficiency|RASopathy|Recurrent_metabolic_encephalomyopathic_crises-rhabdomyolysis-cardiac_arrhythmia-intellectual_disability_syndrome|SLC25A1-related_disorder|Schizophrenia_4|Schwannomatosis|See_cases|Seizure|Spastic_paraplegia_84,_autosomal_recessive|TANGO2-related_disorder|TBX1-related_disorder|Thrombocytopenia|Van_den_Ende-Gupta_syndrome|Velocardiofacial_syndrome|not_specified,.,Inborn_genetic_diseases|Proline_dehydrogenase_deficiency|Schizophrenia_4,.,.,.,.,.,.,.,.,.,2-hydroxyglutaric_aciduria|D,L-2-hydroxyglutaric_aciduria|Inborn_genetic_diseases|Myasthenic_syndrome,_congenital,_23,_presynaptic|SLC25A1-related_disorder,.,.,.,.,.,.,Meier-Gorlin_syndrome_7,CLDN5-related_neurodevelopmental_disorder|CLDN5_deficiency|Neurodevelopmental_disorder,.,.,Bernard_Soulier_syndrome|Thrombocytopenia,Bernard_Soulier_syndrome|Thrombocytopenia,DiGeorge_syndrome|Inborn_genetic_diseases|TBX1-related_disorder|Velocardiofacial_syndrome,.,.,.,Bardet-Biedl_syndrome,.,.,Abnormality_of_metabolism/homeostasis|Acute_rhabdomyolysis|Cardiac_arrhythmia|Episodic_flaccid_weakness|Inborn_genetic_diseases|Intellectual_disability|Metabolic_crises_with_rhabdomyolysis,_cardiac_arrhythmias,_and_neurodegeneration|Recurrent_metabolic_encephalomyopathic_crises-rhabdomyolysis-cardiac_arrhythmia-intellectual_disability_syndrome|Seizure|TANGO2-related_disorder,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,Van_den_Ende-Gupta_syndrome,.,.,.,.,PI4KA-related_disorder|Polymicrogyria,_perisylvian,_with_cerebellar_hypoplasia_and_arthrogryposis|Spastic_paraplegia_84,_autosomal_recessive,.,CEDNIK_syndrome|Hypomyelinating_leukodystrophy_2|Inborn_genetic_diseases,.,.,.,Autism_spectrum_disorder|Cardiovascular_phenotype|Emery-Dreifuss_muscular_dystrophy|Hereditary_cancer-predisposing_syndrome|Hypertrophic_cardiomyopathy_1|LZTR1-related_disorder|LZTR1-related_schwannomatosis|Male_infertility_with_azoospermia_or_oligozoospermia_due_to_single_gene_mutation|Noonan_syndrome|Noonan_syndrome_1|Noonan_syndrome_10|Noonan_syndrome_2|Noonan_syndrome_and_Noonan-related_syndrome|RASopathy|Schwannomatosis|See_cases|not_specified,.,.,.,.,.,.,.,.,.;B_gain_source=.,DDD:56146|DDD:56173|DDD:56174|dgv543n27|dgv99e203|gnomAD-SV_v2.1_DUP_22_50647,DDD:56146|DDD:56173|DDD:56174|dgv543n27|dgv99e203|gnomAD-SV_v2.1_DUP_22_50647,1000g|DDD:56146|DDD:56173|DDD:56174|dgv543n27|dgv99e203|esv3647250|gnomAD-SV_v2.1_DUP_22_50652,dgv543n27,dgv543n27,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,DDD:56225|DDD:56226,DDD:56225|DDD:56226|DDD:56232|DDD:56234,DDD:56225|DDD:56226|DDD:56232|DDD:56234,DDD:56226|DDD:56232|DDD:56234,DDD:56226|DDD:56232,DDD:56226,DDD:56226,DDD:56226,DDD:56226|DDD:56255,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,esv2760719,esv2760719,esv2760719,esv2760719;B_gain_coord=.,22:18655861-19006984|22:18667571-18994853|22:18876429-19006125|22:18877788-19033532|22:18882313-19012377|22:18884850-18926400,22:18655861-19006984|22:18667571-18994853|22:18876429-19006125|22:18877788-19033532|22:18882313-19012377|22:18884850-18926400,22:18655861-19006984|22:18667571-18994853|22:18876429-19006125|22:18877788-19033532|22:18882313-19012377|22:18912158-18998999|22:18912158-18998999|22:18924000-18940000,22:18877788-19033532,22:18877788-19033532,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,22:20313251-20369884|22:20322450-20718598,22:20313251-20369884|22:20322450-20718598|22:20330330-20450295|22:20343574-20380608,22:20313251-20369884|22:20322450-20718598|22:20330330-20450295|22:20343574-20380608,22:20322450-20718598|22:20330330-20450295|22:20343574-20380608,22:20322450-20718598|22:20330330-20450295,22:20322450-20718598,22:20322450-20718598,22:20322450-20718598,22:20322450-20718598|22:20659548-20717455,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,22:21383283-21845355,22:21383283-21845355,22:21383283-21845355,22:21383283-21845355;B_gain_AFmax=.,0.0355,0.0355,0.0355,0.01,0.01,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,0.0509,0.0509,0.0509,0.0509,0.0509,0.0509,0.0509,0.0509,0.0509,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,0.01,0.01,0.01,0.01;B_loss_source=.,dbVar,dbVar,dbVar,dbVar,dbVar,dbVar,dbVar,dbVar,dbVar,dbVar,dbVar,dbVar,dbVar,dbVar,dbVar,dbVar,dbVar,dbVar,dbVar,dbVar,dbVar,dbVar,dbVar,dbVar,dbVar,dbVar,dbVar,dbVar,dbVar,dbVar,dbVar,dbVar,dbVar,dbVar,dbVar,dbVar,dbVar,dbVar,dbVar,dbVar,dbVar,dbVar,dbVar,dbVar,dbVar,dbVar,dbVar,DDD:56225|DDD:56226|dbVar,DDD:56225|DDD:56226|DDD:56232|DDD:56234|dbVar,DDD:56225|DDD:56226|DDD:56232|DDD:56234|dbVar,DDD:56226|DDD:56232|DDD:56234|dbVar,DDD:56226|DDD:56232|dbVar,DDD:56226|HI40:ISCA-46728|dbVar|dgv817e199,DDD:56226|HI40:ISCA-46728|dbVar|dgv817e199,DDD:56226|dbVar,DDD:56226|DDD:56255|dbVar,dbVar,dbVar,dbVar,dbVar,dbVar,dbVar,dbVar,dbVar,dbVar,dbVar,dbVar,dbVar,dbVar,dbVar,dbVar,dbVar,dbVar,dbVar,dbVar,dbVar,dbVar,dbVar;B_loss_coord=.,chr22:18884924-19013000|chr22:18884925-18927000,chr22:18884924-19013000|chr22:18884925-18927000,chr22:18884924-19013000|chr22:18912157-18998999,chr22:18934999-21466000,chr22:18934999-21466000,chr22:18934999-21466000,chr22:18934999-21466000,chr22:18934999-21466000,chr22:18934999-21466000,chr22:18934999-21466000,chr22:18934999-21466000,chr22:18934999-21466000|chr22:19161075-19192940,chr22:18934999-21466000,chr22:18934999-21466000,chr22:18934999-21466000,chr22:18934999-21466000,chr22:18934999-21466000,chr22:18934999-21466000,chr22:18934999-21466000,chr22:18934999-21466000,chr22:18934999-21466000|chr22:19528613-19558447|chr22:19531786-19559055,chr22:18934999-21466000,chr22:18934999-21466000,chr22:18934999-21466000,chr22:18934999-21466000,chr22:18934999-21466000,chr22:18934999-21466000,chr22:18934999-21466000,chr22:18934999-21466000,chr22:18934999-21466000,chr22:18934999-21466000,chr22:18934999-21466000,chr22:18934999-21466000,chr22:18934999-21466000,chr22:18934999-21466000,chr22:18934999-21466000,chr22:18934999-21466000,chr22:18934999-21466000,chr22:18934999-21466000,chr22:18934999-21466000,chr22:18934999-21466000,chr22:18934999-21466000,chr22:18934999-21466000,chr22:18934999-21466000,chr22:18934999-21466000,chr22:18934999-21466000,chr22:18934999-21466000,chr22:18934999-21466000|22:20313251-20369884|22:20322450-20718598,chr22:18934999-21466000|22:20313251-20369884|22:20322450-20718598|22:20330330-20450295|22:20343574-20380608,chr22:18934999-21466000|22:20313251-20369884|22:20322450-20718598|22:20330330-20450295|22:20343574-20380608,chr22:18934999-21466000|22:20322450-20718598|22:20330330-20450295|22:20343574-2038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2853-21483407,22:17036164-22613666|22:19014638-21718005|22:21042853-21483407,22:17036164-22613666|22:19014638-21718005|22:21042853-21483407,22:17036164-22613666|22:19014638-21718005|22:21042853-21483407,22:17036164-22613666|22:19014638-21718005|22:21042853-21483407,22:17036164-22613666|22:19014638-21718005|22:21042853-21483407,22:17036164-22613666|22:19014638-21718005|22:21042853-21483407,22:17036164-22613666|22:19014638-21718005|22:21042853-21483407,22:17036164-22613666|22:19014638-21718005|22:21042853-21483407,22:17036164-22613666|22:19014638-21718005|22:21042853-21483407,22:17036164-22613666|22:19014638-21718005|22:21042853-21483407;B_inv_AFmax=0.1686,0.1686,0.1686,0.1686,0.4801,0.4801,0.4801,0.4801,0.4801,0.4801,0.4801,0.4801,0.4801,0.4801,0.4801,0.4801,0.4801,0.4801,0.4801,0.4801,0.4801,0.4801,0.4801,0.4801,0.4801,0.4801,0.4801,0.4801,0.4801,0.4801,0.4801,0.4801,0.4801,0.4801,0.4801,0.4801,0.4801,0.4801,0.4801,0.4801,0.4801,0.4801,0.4801,0.4801,0.4801,0.4801,0.4801,0.1686,0.1686,0.1686,0.1686,0.1686,0.1686,0.1686,0.1686,0.1686,0.1686,0.1686,0.1686,0.1686,0.1686,0.1686,0.1686,0.1686,0.1686,0.1686,0.1686,0.1686,0.1686,0.1686,0.1686,0.1686,0.1686,0.1686,0.1686,0.1686,0.1686,0.1686,0.1686;po_B_gain_someG_source=22:18667571-18994853_DDD:56146|22:18877788-19033532_dgv543n27|22:18884850-18926400_gnomAD-SV_v2.1_DUP_22_50647|22:18912158-18998999_esv3647250|22:19148049-19148136_gnomAD-SV_v2.1_DUP_22_50677|22:20062642-20063204_IMH|22:20313251-20369884_DDD:56225|22:20330330-20450295_DDD:56232|22:20659548-20717455_DDD:56255|22:21033800-21039000_gnomAD-SV_v2.1_DUP_22_50819|22:21383283-21845355_esv2760719;po_B_gain_someG_coord=22:18655861-19006984_dgv99e203|22:18876429-19006125_DDD:56173|22:18882313-19012377_DDD:56174|22:18912158-18998999_1000g|22:18924000-18940000_gnomAD-SV_v2.1_DUP_22_50652|22:19702276-19702320_DDD:56203|22:20067805-20068161_DDD:56218|22:20322450-20718598_DDD:56226|22:20343574-20380608_DDD:56234|22:20705946-20718598_DDD:56260|22:21088868-21089010_DDD:56283;po_B_loss_someG_source=chr22:18884925-18927000_dbVar|chr22:18912157-18998999_dbVar|chr22:18920358-18923595_dbVar|chr22:18934402-18934486_dbVar|chr22:18938445-18969406_dbVar|chr22:18961454-18962214_dbVar|chr22:18977575-18977640_dbVar|chr22:18977576-18977640_dbVar|chr22:18979860-18979920_dbVar|chr22:18984228-18985696_dbVar|chr22:18994879-18998062_dbVar|chr22:18997267-19009786_dbVar|chr22:19008418-19009937_dbVar|chr22:19041070-19041296_dbVar|chr22:19050181-19050386_dbVar|chr22:19063483-19063613_dbVar|22:19063767-19063900_gnomAD-SV_v2.1_DEL_22_181349|chr22:19087245-19091323_dbVar|chr22:19091546-19099675_dbVar|chr22:19099906-19100607_dbVar...;po_B_loss_someG_coord=chr22:18884924-19013000_dbVar|chr22:18902898-18902992_dbVar|chr22:18912910-18913458_dbVar|chr22:18929400-18935100_dbVar|chr22:18934999-21466000_dbVar|chr22:18943458-18943555_dbVar|chr22:18961457-18962214_dbVar|22:18977576-18977640_1000g|22:18977576-18977640_gnomAD-SV_v2.1_DEL_22_181334|chr22:18980769-18984165_dbVar|chr22:18990004-18990064_dbVar|chr22:18997195-19009720_dbVar|chr22:19006733-19006786_dbVar|chr22:19008684-19010259_dbVar|chr22:19050028-19050086_dbVar|chr22:19054635-19055096_dbVar|chr22:19063767-19063900_dbVar|chr22:19085539-19085825_dbVar|chr22:19091504-19102801_dbVar|22:19098616-19100995_dgv1286e212...;GC_content_left=0.445;GC_content_right=0.32;Repeat_coord_left=22:18894850-18894969;Repeat_type_left=L1ME2z;Repeat_coord_right=22:21464126-21464591;Repeat_type_right=L1MA7;SegDup_left=22:18889511-18912230;HI=1,.,30,.,.,.,.,.,.,.,.,.,30,.,0,.,.,.,.,.,.,.,.,.,30,1,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,30,.,.,.,.,.,.,30,1,.,.,.,.,.,.,.,.,.,.,.,.;TS=.,.,0,.,.,.,.,.,.,.,.,.,.,.,0,.,.,.,.,.,.,.,.,.,.,0,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,0,.,.,.,.,.,.,.,0,.,.,.,.,.,.,.,.,.,.,.,.;DDD_HI_percent=97.89,61.1,45.38,.,.,.,39.12,.,.,33.13,65.74,.,46.07,72.86,19.48,54.99,70.45,.,.,8.4,50.93,.,.,.,78.01,4.92,48.57,.,72.21,40.8,.,54.56,51.91,.,5.07,.,.,68.23,.,8.76,.,37.82,.,.,.,35.77,.,79.33,97.89,.,94.16,.,.,90.21,.,.,.,86.28,70.17,41.2,24.41,.,.,35.17,68.88,61.36,4.35,.,38.59,32.82,50.87,.,.,76.26,74.02,.,.,.,.;ExAC_delZ=-0.807902299547855,.,.,.,.,.,.,.,.,-2.62354415217069,.,.,-2.62354415217069,-2.62354415217069,-2.51547904504873,-2.62354415217069,-2.53806827104914,.,.,-2.57292784443109,.,.,.,.,.,-2.62354415217069,-2.62354415217069,.,-2.62354415217069,-2.62354415217069,.,-2.62354415217069,-2.62354415217069,.,-2.46581011772843,.,.,-2.62354415217069,.,-2.62354415217069,.,-2.62354415217069,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,-1.30437956536809,-1.42333559636086,-1.60479766897668,.,.,.,.,-1.06265755233802,-1.39880243235913,-0.928255048107525,.,-1.14442881641699,-1.25119505668143,-1.44618961523547,.,.,-1.8606303493434,-0.807902299547855,.,.,.,.;ExAC_dupZ=-1.20830830104818,.,.,.,.,.,.,.,.,-2.53125239294469,.,.,-2.53125239294469,-2.53125239294469,-2.53125239294469,-2.53125239294469,-2.53125239294469,.,.,-2.53125239294469,.,.,.,.,.,-2.53125239294469,-2.53125239294469,.,-2.53125239294469,-2.53125239294469,.,-2.53125239294469,-2.53125239294469,.,-2.53125239294469,.,.,-2.53125239294469,.,-2.53125239294469,.,-2.53125239294469,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,-1.89912490049618,-1.93669033911618,-1.94085802577819,.,.,.,.,-1.49456297636655,-1.53414994058354,-1.20830830104818,.,-1.26664892202732,-1.28020537251329,-1.52989215323949,.,.,-1.51336493990188,-1.26588610868392,.,.,.,.;ExAC_cnvZ=-0.791505674827999,.,.,.,.,.,.,.,.,-2.47162789907313,.,.,-2.47162789907313,-2.47162789907313,-2.47162789907313,-2.47162789907313,-2.47162789907313,.,.,-2.47162789907313,.,.,.,.,.,-2.47162789907313,-2.47162789907313,.,-2.47162789907313,-2.47162789907313,.,-2.47162789907313,-2.47162789907313,.,-2.47162789907313,.,.,-2.47162789907313,.,-2.47162789907313,.,-2.47162789907313,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,-1.51976012533128,-1.61173791689534,-1.599983320827,.,.,.,.,-1.03231231326932,-1.19910660480315,-0.791505674827999,.,-0.922844550293754,-0.946080819110286,-1.19895133869269,.,.,-1.2805127161158,-1.04316708587741,.,.,.,.;ExAC_synZ=2.94244265911253,-0.678746019468492,0.360135634788785,.,.,.,-0.375038933750903,.,.,-0.184731887964386,1.18735715980007,.,0.459211010381399,-0.597972033048653,-0.543665561522748,0.0822917398873284,0.128056348383697,.,.,0.554183575869215,2.94244265911253,.,.,.,-0.002241469611443,2.36782594176173,-0.373621593221624,.,0.348188483468328,0.465852147917107,.,0.425870777992255,1.46130508236304,.,0.690563071344625,.,.,-1.98609532754524,.,-1.04492215962902,.,-0.408428770523539,.,.,.,-0.800223805913347,.,0.698499439551705,.,.,.,.,.,.,.,.,.,2.28676628831896,.,-0.0046056816669864,0.672972182845271,.,.,1.20573288011437,-0.289055396385536,1.58078637399342,0.477351976371369,.,0.687283106386744,0.246895000414255,-1.50983365445593,.,.,-0.990180484365383,-0.387275128092876,.,.,.,.;ExAC_misZ=5.29477062168781,-0.22775445384527,0.772811927860626,.,.,.,0.817637812863819,.,.,1.02819617031079,0.932740471460801,.,1.99698466418685,-1.19469008098196,3.98018572942351,-0.450618700229176,0.836381939603491,.,.,1.2901097836858,3.34022892264706,.,.,.,0.855158778511627,3.38001100960461,0.590344002361273,.,0.327140414338646,0.557839148920189,.,-0.701931719398633,0.279301120222081,.,4.03153091509844,.,.,-0.363927890852326,.,2.06932219421127,.,2.39258092860216,.,.,.,1.18081437151802,.,0.174075190759776,.,.,.,.,.,.,.,.,.,2.39892044394279,.,2.85964800561254,2.65389095774821,.,.,5.29477062168781,-0.349034099945665,-0.841707455415557,3.00980268645085,.,1.33036583543754,0.909128978651125,1.16392737773964,.,.,-0.63060581685217,-1.12481109733158,.,.,.,.;GenCC_disease=.,.,hyperprolinemia_type_1,.,.,.,schizophrenia,.,.,.,.,.,D,L-2-hydroxyglutaric_aciduria|mitochondrial_disease|myasthenic_syndrome,_congenital,_23,_presynaptic|presynaptic_congenital_myasthenic_syndrome,congenital_insensitivity_to_pain_with_severe_intellectual_disability|multiple_congenital_anomalies/dysmorphic_syndrome,neurodevelopmental_disorder,.,.,.,.,Meier-Gorlin_syndrome|Meier-Gorlin_syndrome_7,neurodevelopmental_disorder,.,.,.,Bernard-Soulier_syndrome|autosomal_dominant_macrothrombocytopenia,22q11.2_deletion_syndrome|conotruncal_heart_malformations|velocardiofacial_syndrome,.,.,dilated_cardiomyopathy|familial_glucocorticoid_deficiency|familial_isolated_dilated_cardiomyopathy|glucocorticoid_deficiency_5,paroxysmal_dyskinesia,.,.,metabolic_encephalomyopathic_crises,_recurrent,_with_rhabdomyolysis,_cardiac_arrhythmias,_and_neurodegeneration|recurrent_metabolic_encephalomyopathic_crises-rhabdomyolysis-cardiac_arrhythmia-intellectual_disability_syndrome,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,van_den_Ende-Gupta_syndrome,.,.,.,.,polymicrogyria,_perisylvian,_with_cerebellar_hypoplasia_and_arthrogryposis,heparin_cofactor_2_deficiency,CEDNIK_syndrome,congenital_heart_disease,.,.,LZTR1-related_schwannomatosis|Noonan_syndrome|Noonan_syndrome_10|Noonan_syndrome_2|breast_cancer|schwannomatosis,.,.,.,myopathy,.,.,.,.,.;GenCC_moi=.,.,AR,.,.,.,AD,.,.,.,.,.,AD|AR,AD|AR,AD,.,.,.,.,AD|AR,AD,.,.,.,AD|AR,AD,.,.,AD|AR,AD,.,.,AR,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,AR,.,.,.,.,AR,AD,AR,.,.,.,AD|AR,.,.,.,AR,.,.,.,.,.;GenCC_classification=.,.,Definitive|Strong|Supportive,.,.,.,Limited,.,.,.,.,.,Definitive|Limited|Strong|Supportive,Limited|Supportive,Limited,.,.,.,.,Definitive|Strong|Supportive,Limited,.,.,.,Definitive|Strong|Supportive,Definitive|Strong|Supportive,.,.,Limited|Supportive,Moderate,.,.,Moderate|Strong,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,Limited|Moderate|Strong|Supportive,.,.,.,.,Moderate|Strong,Definitive|Limited|Strong,Strong|Supportive,No_Known_Disease_Relationship,.,.,Definitive|Moderate|Strong|Supportive,.,.,.,Limited,.,.,.,.,.;GenCC_pmid=.,.,10192398|12217952|12525555|15662599|19736351|20524212|20524212[PMID]_23462603[PMID]|23462603|26978485|28202261|28851938|5031477,.,.,.,.,.,.,.,.,.,23561848|23561848[PMID]_23393310[PMID]|26273529|26870663|29238895|31527857|31808147|NULL,26068709[PMID],33417013,.,.,.,.,11416137|121376|149250|27374770|27374770[PMID]|282832|30986546,35714222|36477332,.,.,.,10887115|12447957|15213102|18825380|19484238|22886561[PMID]|23995613|28064200[PMID],11239417|11242049|11242110|11748311|14585638|14585638[PMID]|18636631|192430|20054531|20937753|24637876|24998776|25860641|29500247,.,.,21247928[PMID]|24601690[PMID]|30237576|32476818,.,.,.,26805781|26805782,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,20887961|20887961[PMID]_22140376[PMID]|22140376|23808541|24478002|3808541,.,.,.,.,25855803|29738522|30614210|34415310|34415322,15337701|2647747|277130|8562924,15968592|15968592[PMID]_21073448[PMID]|21073448|23231787|25473036|26747696,.,.,.,15955931|16534111|23401320|24362817|25335493|25480913|25795793|25795793[PMID]|26446362|274799|278971|287232|29469822|29959388|30368668|303983|30442762|30442766|30481304|30859559|31182298|37592023|37936555|38135892,.,.,.,.,.,.,.,.,.;NCBI_gene_ID=.,8214,5625,.,26220,117134596,9993,25786,8220,23617,2928,100652736,6576,8218,7290,64976,128977,105372860,7353,8318,7122,150185,5413,.,2812,6899,54584,79680,10587,1312,100616414,421,128989,406961,54487,100500860,100302197,27037,102465490,5902,109617010,29801,388849,284865,150197,65078,100302118,85359,653203,.,728226,728229,728233,85376,117134597,729461,101927859,7625,91179,84861,51586,.,84222,5297,3053,9342,1399,101928891,150209,8216,80764,439931,113691,9127,6545,693234,440799,400891,400892;HGNC_gene_ID=.,HGNC:2846,HGNC:9453,.,HGNC:16757,HGNC:54842,HGNC:2845,HGNC:17226,HGNC:16817,HGNC:11401,HGNC:4613,HGNC:50503,HGNC:10979,HGNC:2093,HGNC:4916,HGNC:14491,HGNC:27012,HGNC:55917,HGNC:12520,HGNC:1739,HGNC:2047,HGNC:48580,HGNC:9164,.,HGNC:4440,HGNC:11592,HGNC:4397,HGNC:26112,HGNC:18155,HGNC:2228,HGNC:41591,HGNC:728,HGNC:25439,HGNC:31556,HGNC:2847,HGNC:38937,HGNC:35371,HGNC:24974,HGNC:50256,HGNC:9847,HGNC:52221,HGNC:18474,HGNC:51899,HGNC:55221,HGNC:26519,HGNC:18601,HGNC:35279,HGNC:18551,HGNC:45045,.,HGNC:33426,HGNC:33600,HGNC:33576,HGNC:29344,HGNC:54843,HGNC:52448,HGNC:52423,HGNC:13144,HGNC:19869,HGNC:25888,HGNC:14248,.,HGNC:25317,HGNC:8983,HGNC:4838,HGNC:11133,HGNC:2363,HGNC:52424,HGNC:26398,HGNC:6742,HGNC:23190,HGNC:41013,HGNC:24067,HGNC:8538,HGNC:11062,HGNC:32905,HGNC:34076,HGNC:34301,HGNC:1015;OMIM_ID=606810|190315|603465|138720|602054|606448|116790|616830|605566|613619|600286|142360|604202|600574,.,606810,.,.,.,.,.,.,.,.,.,190315,.,.,.,.,.,.,603465,.,.,.,.,138720,602054,.,.,606448,116790,.,.,616830,.,.,.,.,.,.,.,.,.,.,.,.,605566,.,.,.,.,.,.,.,.,.,.,.,.,613619,.,.,.,.,600286,142360,604202,.,.,.,600574,.,.,.,.,.,.,.,.,.;OMIM_phenotype=.,.,Hyperprolinemia,_type_I,_239500_(3)_AR|(Schizophrenia,_susceptibility_to,_4),_600850_(3)_AD,.,.,.,.,.,.,.,.,.,Combined_D-2-_and_L-2-hydroxyglutaric_aciduria,_615182_(3)_AR|Myasthenic_syndrome,_congenital,_23,_presynaptic,_618197_(3)_AR,.,.,.,.,.,.,Meier-Gorlin_syndrome_7,_617063_(3)_AR,.,.,.,.,Bernard-Soulier_syndrome,_type_B,_231200_(3)_AR|Giant_platelet_disorder,_isolated,_231200_(3)_AR,Conotruncal_anomaly_face_syndrome,_217095_(3)|DiGeorge_syndrome,_188400_(3)_AD|Tetralogy_of_Fallot,_187500_(3)_AD|Velocardiofacial_syndrome,_192430_(3)_AD,.,.,?Glucocorticoid_deficiency_5,_617825_(3)_AR,(Panic_disorder,_susceptibility_to),_167870_(3)_?AD|(Schizophrenia,_susceptibility_to),_181500_(3)_AD,.,.,Metabolic_encephalomyopathic_crises,_recurrent,_with_rhabdomyolysis,_cardiac_arrhythmias,_and_neurodegeneration,_616878_(3)_AR,.,.,.,.,.,.,.,.,.,.,.,.,(Schizophrenia,_susceptibility_to),_181500_(3)_AD,.,.,.,.,.,.,.,.,.,.,.,.,Van_den_Ende-Gupta_syndrome,_600920_(3)_AR,.,.,.,.,Gastrointestinal_defects_and_immunodeficiency_syndrome_2,_619708_(3)_AR|Polymicrogyria,_perisylvian,_with_cerebellar_hypoplasia_and_arthrogryposis,_616531_(3)_AR|Spastic_paraplegia_84,_AR,_619621_(3)_AR,Thrombophilia_10_due_to_heparin_cofactor_II_deficiency,_612356_(3)_AD,Cerebral_dysgenesis,_neuropathy,_ichthyosis,_and_palmoplantar_keratoderma_syndrome,_609528_(3)_AR,.,.,.,Noonan_syndrome_10,_616564_(3)_AD|Noonan_syndrome_2,_605275_(3)_AR|(Schwannomatosis-2,_susceptibility_to),_615670_(3)_AD,.,.,.,.,.,.,.,.,.;OMIM_inheritance=.,.,AD|AR,.,.,.,.,.,.,.,.,.,AR,.,.,.,.,.,.,AR,.,.,.,.,AR,AD,.,.,AR,?AD|AD,.,.,AR,.,.,.,.,.,.,.,.,.,.,.,.,AD,.,.,.,.,.,.,.,.,.,.,.,.,AR,.,.,.,.,AR,AD,AR,.,.,.,AD|AR,.,.,.,.,.,.,.,.,.;OMIM_morbid=yes,.,yes,.,.,.,.,.,.,.,.,.,yes,.,.,.,.,.,.,yes,.,.,.,.,yes,yes,.,.,.,.,.,.,yes,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,yes,.,.,.,.,yes,yes,yes,.,.,.,yes,.,.,.,.,.,.,.,.,.;OMIM_morbid_candidate=yes,.,yes,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,yes,yes,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,yes,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,.,yes,.,.,.,.,.,.,.,.,.;LOEUF_bin=0,9,6,.,.,.,4,.,.,6,9,.,3,5,0,4,9,.,.,3,1,.,.,.,7,2,5,.,5,8,.,4,4,.,0,.,.,5,.,2,.,1,.,.,.,1,.,7,7,.,.,.,.,7,.,.,.,4,0,2,0,.,.,2,8,4,3,.,5,9,4,.,.,6,6,.,.,.,.;GnomAD_pLI=1,9.8176e-12,5.3577e-12,.,.,.,5.1573e-06,.,.,0.003861,0.0044347,.,0.058829,2.5101e-37,1,0.052924,1.9976e-05,.,.,4.6237e-05,0.89512,.,.,.,0.51249,0.83661,4.7419e-05,.,3.4688e-11,1.1377e-06,.,5.0422e-11,0.00014769,.,0.99973,.,.,1.0841e-08,.,0.82235,.,0.85288,.,.,.,0.95882,.,5.0636e-05,0.48065,.,.,.,.,9.0005e-09,.,.,.,1.5586e-06,0.9998,0.42419,0.99974,.,.,3.1234e-12,2.5137e-10,0.013567,0.44604,.,1.9474e-14,1.0210999999999999e-92,0.013291,.,.,4.468e-09,2.8317e-07,.,.,.,.;ExAC_pLI=1,7.621e-07,4.7536e-06,.,.,.,0.0010959,.,.,0.0041565,0.037186,.,0.63354,1.2408e-26,1,0.020082,3.69e-07,.,.,0.069104,0.74052,.,.,.,0.10112,0.9834,0.0012635,.,1.0692e-08,0.00084666,.,8.2184e-07,4.2224e-06,.,0.9999,.,.,1.3059e-05,.,0.33622,.,0.98899,.,.,.,0.52644,.,0.12857,.,.,.,.,.,.,.,.,.,0.00035588,.,0.70261,0.96081,.,.,0.00080407,2.7955e-05,0.15166,0.16345,.,1.9583e-10,3.3832e-52,0.029328,.,.,1.8785e-07,0.00010047,.,.,.,.;AnnotSV_ranking_score=1.9;AnnotSV_ranking_criteria=1A_(cf_Gene_count,_RE_gene,_+0.00)|2A_(cf_P_loss_source,_+1.00)|3C_(78_genes,_+0.90)|5F_(+0.00);ACMG_class=5,full=5,full=5,full=5,full=5,full=5,full=5,full=5,full=5,full=5,full=5,full=5,full=5,full=5,full=5,full=5,full=5,full=5,full=5,full=5,full=5,full=5,full=5,full=5,full=5,full=5,full=5,full=5,full=5,full=5,full=5,full=5,full=5,full=5,full=5,full=5,full=5,full=5,full=5,full=5,full=5,full=5,full=5,full=5,full=5,full=5,full=5,full=5,full=5,full=5,full=5,full=5,full=5,full=5,full=5,full=5,full=5,full=5,full=5,full=5,full=5,full=5,full=5,full=5,full=5,full=5,full=5,full=5,full=5,full=5,full=5,full=5,full=5,full=5,full=5,full=5,full=5,full=5,full=5;END=21464119;SVLEN=-2569284\tGT\t1/.\nX\t53250654\t.\tG\t<DUP>\t.\tPASS\tAnnotSV_ID=X_53250654_53856257_DUP_1;SV_start=53250654;Biologist_annotation=HUWE1;Biologist_ranking=Pathogenic;Annotation_mode=full,split,split,split,split,split,split,split,split,split;CytoBand=p11.22;Gene_name=KDM5C|IQSEC2|SMC1A|MIR6857|RIBC1|HSD17B10|HUWE1|MIR98|MIRLET7F2,KDM5C,IQSEC2,SMC1A,MIR6857,RIBC1,HSD17B10,HUWE1,MIR98,MIRLET7F2;Closest_left=MIR6894;Closest_right=PHF8;Gene_count=9;Tx=.,NM_001353979,NM_001111125,NM_006306,NR_106916,NM_001031745,NM_004493,NM_031407,NR_029513,NR_029484;Tx_version=.,2,3,4,1,5,3,7,1,1;Tx_start=.,53205458,53262057,53401069,53432604,53449821,53458208,53559056,53583183,53584152;Tx_end=.,53254389,53350548,53449603,53432697,53458063,53461317,53713664,53583302,53584235;Overlapped_tx_length=.,3736,88491,48534,93,8242,3109,154608,119,83;Overlapped_CDS_length=.,150,4467,3702,0,1140,786,13125,0,0;Overlapped_CDS_percent=.,3,100,100,0,100,100,100,0,0;Frameshift=.,no,no,no,.,no,no,no,.,.;Exon_count=.,26,15,25,1,8,6,84,1,1;Location=.,txStart-intron1,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd,txStart-txEnd;Location2=.,5'UTR-CDS,5'UTR-3'UTR,5'UTR-3'UTR,UTR,5'UTR-3'UTR,5'UTR-3'UTR,5'UTR-3'UTR,UTR,UTR;Dist_nearest_SS=.,555,.,.,.,.,.,.,.,.;Nearest_SS_type=.,3',.,.,.,.,.,.,.,.;Intersect_start=.,53250653,53262057,53401069,53432604,53449821,53458208,53559056,53583183,53584152;Intersect_end=.,53254389,53350548,53449603,53432697,53458063,53461317,53713664,53583302,53584235;RE_gene=ACACA_(morbid/RE=mTL_miRNA)|ACADM_(morbid/RE=mTL_miRNA)|ACTA1_(morbid/RE=mTL_miRNA)|ACVR2B_(morbid/RE=mTL_miRNA)|ADA_(morbid/RE=mTL_miRNA)|ADGRE2_(morbid/RE=mTL_miRNA)|ADGRG1_(morbid/RE=mTL_miRNA)|ADH5_(morbid/RE=mTL_miRNA)|AGO1_(morbid/RE=mTL_miRNA)|AGPS_(morbid/RE=mTL_miRNA)|AHR_(morbid/RE=mTL_miRNA)|AK2_(morbid/RE=mTL_miRNA)|ALAS2_(morbid/RE=ABC_enhancer)|ALDH1A3_(morbid/RE=mTL_miRNA)|ALDH7A1_(morbid/RE=mTL_miRNA)|ALG3_(morbid/RE=mTL_miRNA)|ALG8_(morbid/RE=mTL_miRNA)|AMD1_(morbid/RE=mTL_miRNA)|AMMECR1_(morbid/RE=mTL_miRNA)|ANKRD11_(HI=3/morbid/RE=mTL_miRNA)|ANTXR2_(morbid/RE=mTL_miRNA)|AP1S1_(morbid/RE=mTL_miRNA)|ARCN1_(HI=3/morbid/RE=mTL_miRNA)|ARHGEF18_(morbid/RE=mTL_miRNA)|ARID1A_(HI=3/morbid/RE=mTL_miRNA)|ARID1B_(HI=3/morbid/RE=mTL_miRNA)|ARL6IP1_(morbid/RE=mTL_miRNA)|ASCC3_(morbid/RE=mTL_miRNA)|ATL1_(morbid/RE=mTL_miRNA)|ATP13A3_(morbid/RE=mTL_miRNA)|ATP2A2_(morbid/RE=mTL_miRNA)|ATP7B_(morbid/RE=mTL_miRNA)|ATR_(morbid/RE=mTL_miRNA)|ATXN2_(morbid/RE=mTL_miRNA)|B4GAT1_(morbid/RE=mTL_miRNA)|BACH1_(morbid/RE=mTL_miRNA)|BCL11A_(HI=3/morbid/RE=mTL_miRNA)|BCL2_(morbid/RE=mTL_miRNA)|BCOR_(HI=3/morbid/RE=mTL_miRNA)|BNC2_(morbid/RE=mTL_miRNA)|C12orf4_(morbid/RE=mTL_miRNA)|C3_(morbid/RE=mTL_miRNA)|CACNA1C_(morbid/RE=mTL_miRNA)|CACNB2_(morbid/RE=mTL_miRNA)|CALM1_(morbid/RE=mTL_miRNA)|CANT1_(morbid/RE=mTL_miRNA)|CAP1_(morbid/RE=mTL_miRNA)|CAPN15_(morbid/RE=mTL_miRNA)|CBL_(morbid/RE=mTL_miRNA)|CCND2_(morbid/RE=mTL_miRNA)...;P_gain_phen=Xp11.22_region_(includes_HUWE1);P_gain_source=TS3:ISCA-46299|dbVar:nssv15147941|dbVar:nssv15147942|dbVar:nssv15161312|nssv15161529|dbVar:nssv15161768,.,dbVar:nssv15147941|dbVar:nssv15147942,.,.,.,.,dbVar:nssv15161768,.,.;P_gain_coord=X:53276031-53298472|X:53283514-53325284|X:53363457-53793054|X:53559549-53622547|X:53559733-53790650,.,X:53276031-53298472|X:53283514-53325284,.,.,.,.,X:53559549-53622547,.,.;P_loss_phen=Cornelia_de_Lange_syndrome_2,_300590_(3)_XLD|Developmental_and_epileptic_encephalopathy_85,_with_or_without_midline_brain_defects,_301044_(3)_XLD|HSD10_mitochondrial_disease,_300438_(3)_XLD|Intellectual_developmental_disorder,_XL_1,_309530_(3)_XLD|Intellectual_developmental_disorder,_XL_syndromic,_Turner_type,_309590_(3)_XL|Intellectual_disability,_X-linked_1,.,Intellectual_developmental_disorder,_XL_1,_309530_(3)_XLD|Intellectual_disability,_X-linked_1,.,.,.,HSD10_mitochondrial_disease,_300438_(3)_XLD,Intellectual_developmental_disorder,_XL_syndromic,_Turner_type,_309590_(3)_XL,.,.;P_loss_source=CLN:1065452|HI3:IQSEC2|HI3:SMC1A|dbVar:nssv15769470|dbVar:nssv16212358|dbVar:nssv16215156|dbVar:nssv17171530|dbVar:nssv17171900|dbVar:nssv17172048|dbVar:nssv17172462|dbVar:nssv17970926|dbVar:nssv17971164|dbVar:nssv18788536|dbVar:nssv18791522|morbid:HSD17B10|morbid:HUWE1|morbid:IQSEC2|morbid:SMC1A,dbVar:nssv16215156,CLN:1065452|HI3:IQSEC2|dbVar:nssv17171900|dbVar:nssv17172048|dbVar:nssv17172462|dbVar:nssv17970926|dbVar:nssv18791522|morbid:IQSEC2,dbVar:nssv15769470|dbVar:nssv16212358|dbVar:nssv17171530|dbVar:nssv17971164|dbVar:nssv18788536,.,.,morbid:HSD17B10,morbid:HUWE1,.,.;P_loss_coord=X:53253923-53254071|X:53262059-53350548|X:53263402-53280376|X:53264077-53264258|X:53264078-53264257|X:53270947-53271111|X:53279442-53280376|X:53295510-53310766|X:53348888-53349736|X:53401070-53449677|X:53401071-53449677|X:53430479-53432101|X:53430479-53442138|X:53435974-53442138|X:53448826-53449569|X:53449432-53449549|X:53458209-53461317|X:53559057-53713664,X:53253923-53254071,X:53262059-53350548|X:53263402-53280376|X:53264077-53264258|X:53264078-53264257|X:53270947-53271111|X:53279442-53280376|X:53295510-53310766|X:53348888-53349736,X:53430479-53432101|X:53430479-53442138|X:53435974-53442138|X:53448826-53449569|X:53449432-53449549,.,.,X:53458209-53461317,X:53559057-53713664,.,.;P_snvindel_nb=277,6,136,118,.,.,4,13,.,.;P_snvindel_phen=Abnormal_heart_valve_morphology|Atypical_Rett_syndrome|Congenital_muscular_hypertrophy-cerebral_syndrome|Cornelia_de_Lange_syndrome_1|De_Lange_syndrome|Developmental_and_epileptic_encephalopathy,_85,_with_or_without_midline_brain_defects|Epileptic_encephalopathy|Global_developmental_delay|HSD10_mitochondrial_disease|HUWE1-related_disorder|Hirsutism|Hypertonia|Inborn_genetic_diseases|Intellectual_disability|Intellectual_disability,_X-linked_1|Intellectual_disability,_X-linked_syndromic,_Turner_type|Microcephaly|Neurodevelopmental_delay|Paraplegia-intellectual_disability-hyperkeratosis_syndrome|Progressive_sensorineural_hearing_impairment|SMC1A-related_cohesinopathy|SMC1A-related_disorder|See_cases|Seizure|Severe_intellectual_deficiency|Spastic_paraplegia|Syndromic_X-linked_intellectual_disability_Claes-Jensen_type|Undetermined_early-onset_epileptic_encephalopathy,Inborn_genetic_diseases|Spastic_paraplegia|Syndromic_X-linked_intellectual_disability_Claes-Jensen_type,Inborn_genetic_diseases|Intellectual_disability|Intellectual_disability,_X-linked_1|Neurodevelopmental_delay|Paraplegia-intellectual_disability-hyperkeratosis_syndrome|See_cases|Severe_intellectual_deficiency|Undetermined_early-onset_epileptic_encephalopathy,Abnormal_heart_valve_morphology|Atypical_Rett_syndrome|Congenital_muscular_hypertrophy-cerebral_syndrome|Cornelia_de_Lange_syndrome_1|De_Lange_syndrome|Developmental_and_epileptic_encephalopathy,_85,_with_or_without_midline_brain_defects|Epileptic_encephalopathy|Global_developmental_delay|Hirsutism|Hypertonia|Inborn_genetic_diseases|Intellectual_disability|Microcephaly|Progressive_sensorineural_hearing_impairment|SMC1A-related_cohesinopathy|SMC1A-related_disorder|See_cases|Seizure,.,.,HSD10_mitochondrial_disease,Global_developmental_delay|HUWE1-related_disorder|Inborn_genetic_diseases|Intellectual_disability|Intellectual_disability,_X-linked_syndromic,_Turner_type|Neurodevelopmental_delay,.,.;B_inv_source=IMH;B_inv_coord=X:46769178-84009828;B_inv_AFmax=0.128;po_B_loss_someG_source=chrX:53318184-53318333_dbVar|chrX:53319071-53320350_dbVar|chrX:53414007-53419436_dbVar|chrX:53475340-53498420_dbVar|X:53478094-53491686_1000g|X:53478191-53491588_IMH|X:53478192-53491585_gnomAD-SV_v2.1_DEL_X_186301|chrX:53481193-53482847_dbVar|chrX:53485000-53555000_dbVar|X:53496417-53499888_1000g|chrX:53504537-53504627_dbVar|chrX:53513549-53520809_dbVar|chrX:53520678-53520750_dbVar|chrX:53561861-53562148_dbVar|chrX:53684764-53684885_dbVar|X:53772345-53778301_1000g|X:53772358-53778316_IMH|chrX:53776500-53781600_dbVar|chrX:53781934-53808203_dbVar|X:53792164-53792218_1000g...;po_B_loss_someG_coord=chrX:53256067-53256435_dbVar|chrX:53318309-53320696_dbVar|X:53319072-53320350_1000g|chrX:53437409-53437467_dbVar|chrX:53478093-53491686_dbVar|X:53478160-53491616_DDD:57601|chrX:53478192-53491585_dbVar|chrX:53478817-53479165_dbVar|X:53481194-53482847_1000g|chrX:53496416-53499888_dbVar|chrX:53496418-53499890_dbVar|chrX:53513441-53520776_dbVar|chrX:53513576-53513640_dbVar|chrX:53557344-53558918_dbVar|chrX:53680158-53680957_dbVar|chrX:53772344-53778301_dbVar|X:53772358-53778316_DDD:57606|chrX:53774645-53775785_dbVar|X:53776864-53777371_nsv515204|chrX:53787125-53795624_dbVar...;GC_content_left=0.42;GC_content_right=0.295;Repeat_coord_left=X:53250479-53250649;Repeat_type_left=MIRc;Repeat_coord_right=X:53855851-53856180|X:53856303-53856465;Repeat_type_right=L1MA7|L1MA7;HI=3,3,3,3,.,.,0,0,.,.;TS=.,0,0,0,.,.,0,0,.,.;DDD_HI_percent=75.6,11.71,26.16,14.23,.,75.6,21.63,10.58,.,.;ExAC_synZ=0.807946261414963,-1.20041549946446,-0.257046228208263,-0.112682658348456,.,0.80408198011521,0.807946261414963,-1.65771922174252,.,.;ExAC_misZ=9.03470791370173,5.44441583895939,4.55717824142058,6.67845368195785,.,0.293719819544616,2.17074250392365,9.03470791370173,.,.;GenCC_disease=.,X-linked_syndromic_intellectual_disability|syndromic_X-linked_intellectual_disability_Claes-Jensen_type,X-linked_complex_neurodevelopmental_disorder|intellectual_disability,_X-linked_1|non-syndromic_X-linked_intellectual_disability|severe_intellectual_disability-progressive_postnatal_microcephaly-_midline_stereotypic_hand_movements_syndrome,Cornelia_de_Lange_syndrome|Cornelia_de_Lange_syndrome_2|X-linked_complex_neurodevelopmental_disorder|atypical_Rett_syndrome|developmental_and_epileptic_encephalopathy,_85,_with_or_without_midline_brain_defects,.,.,HSD10_disease,_infantile_type|HSD10_disease,_neonatal_type|HSD10_mitochondrial_disease|syndromic_X-linked_intellectual_disability_type_10,intellectual_disability,_X-linked_syndromic,_Turner_type|non-syndromic_X-linked_intellectual_disability|syndromic_intellectual_disability,.,.;GenCC_moi=.,XL,XL,AD|XL,.,.,XL,AD|XL,.,.;GenCC_classification=.,Definitive|Strong|Supportive,Definitive|Strong|Supportive,Definitive|Strong|Supportive,.,.,Definitive|Strong|Supportive,Definitive|Strong|Supportive,.,.;GenCC_pmid=.,15586325|15586325[PMID]|18697827|21575681|22326837|25666439|32279304,20473311[PMID]|21686261|23674175[PMID]|24306141|25167861|26544041|26793055|27665735|300522|30206421,20301283[PMID]|26358754|26386245|27334371|28166369|28548707|31334757|32222533[PMID],.,.,22127393|22127393[PMID],18252223|19377476|1968668|20231446|22840365|24303071|25644381|25985138|27418510|27615324|29180823|29180823[PMID],.,.;NCBI_gene_ID=.,8242,23096,8243,102465516,158787,3028,10075,407054,406889;HGNC_gene_ID=.,HGNC:11114,HGNC:29059,HGNC:11111,HGNC:50263,HGNC:26537,HGNC:4800,HGNC:30892,HGNC:31649,HGNC:31484;OMIM_ID=314690|300522|300040|300256|300697,314690,300522,300040,.,.,300256,300697,.,.;OMIM_phenotype=.,Intellectual_developmental_disorder,_XL_syndromic,_Claes-Jensen_type,_300534_(3)_XLR,Intellectual_developmental_disorder,_XL_1,_309530_(3)_XLD,Cornelia_de_Lange_syndrome_2,_300590_(3)_XLD|Developmental_and_epileptic_encephalopathy_85,_with_or_without_midline_brain_defects,_301044_(3)_XLD,.,.,HSD10_mitochondrial_disease,_300438_(3)_XLD,Intellectual_developmental_disorder,_XL_syndromic,_Turner_type,_309590_(3)_XL,.,.;OMIM_inheritance=.,XLR,XLD,XLD,.,.,XLD,XL,.,.;OMIM_morbid=yes,yes,yes,yes,.,.,yes,yes,.,.;LOEUF_bin=0,0,0,0,.,1,1,0,.,.;GnomAD_pLI=1,1,0.99998,1,.,0.983,0.93604,1,.,.;ExAC_pLI=1,0.99784,0.97539,0.99999,.,0.96626,0.88687,1,.,.;AnnotSV_ranking_score=1;AnnotSV_ranking_criteria=1A_(cf_Gene_count,_RE_gene,_+0.00)|2A_(cf_P_gain_source,_+1.00)|2H-2_(HSD17B10/HUWE1/IQSEC2/SMC1A,_+0.00)|2J_(KDM5C,_+0.00)|3A_(9_genes,_+0.00)|5F_(+0.00);ACMG_class=5,full=5,full=5,full=5,full=5,full=5,full=5,full=5,full=5,full=5;END=53856257;SVLEN=605604\tGT\t1/.\n"
  },
  {
    "path": "share/doc/AnnotSV/Example/test1.bed",
    "content": "# chrom\tStart\tEnd\tVariant_type\tBiologist_annotation\tBiologist_ranking\r\n1\t149041933\t149209289\tDEL\t\tBenign\r\n1\t196756231\t196799302\tDEL\t\tBenign\r\n1\t248738898\t248785562\tDEL\t\tBenign\r\n2\t242865920\t243028452\tDEL\t\tBenign\r\n3\t62939217\t65268743\tDEL\tVOUS in 2017, reclassified in 2020\tPathogenic\r\n3\t97483033\t97487074\tDEL\tBBS3/ARL6 promotor overlapped\tPathogenic\r\n3\t195419168\t195472855\tDEL\t\tBenign\r\n4\t71552\t9371067\tDEL\t4p- syndrom\tPathogenic\r\n4\t69392545\t69462438\tDEL\t\tBenign\r\n5\t723194\t777000\tDUP\t\tBenign\r\n5\t88774328\t91802402\tDEL\tTAD MEF2C\tPathogenic\r\n6\t266079\t362290\tDEL\t\tBenign\r\n6\t29854870\t29896710\tDEL\t\tBenign\r\n6\t78979172\t79023328\tDEL\t\tBenign\r\n7\t33397467\t33397607\tDEL\tBBS9 inframe\tPathogenic\r\n7\t38296176\t38352444\tDEL\t\tBenign\r\n7\t72726578\t74139390\tDEL\tWilliams syndrom\tPathogenic\r\n8\t7169490\t7753583\tDUP\t\tBenign\r\n8\t7169490\t7753583\tDEL\t\tBenign\r\n8\t56986129\t57169684\tDEL\tVOUS in 2017, reclassified in 2020\tPathogenic\r\n8\t141035363\t141061798\tDEL\tDI AR\tPathogenic\r\n10\t46976157\t47590995\tDUP\t\tBenign\r\n11\t66287088\t66288847\tDEL\tBBS1 internal frameshift\tPathogenic\r\n12\t63935481\t64130626\tDEL\tDPY19L2 (both DEL and DUP LCR mediated, precise breakpoints)\tPathogenic\r\n12\t63935481\t64130626\tDUP\tDPY19L2 (both DEL and DUP LCR mediated, precise breakpoints)\tPathogenic\r\n14\t22323879\t22952279\tDEL\t\tBenign\r\n14\t74001651\t74022324\tDEL\t\tBenign\r\n14\t107152092\t107180095\tDEL\t\tBenign\r\n15\t20432851\t22765687\tDUP\t\tBenign\r\n15\t20564608\t22409391\tDEL\t\tBenign\r\n15\t34735949\t34806953\tDEL\t\tBenign\r\n16\t1565629\t1571297\tDUP\tIFT140 tandem duplication \tPathogenic\r\n16\t31955076\t34702366\tDUP\t\tBenign\r\n16\t32471625\t33487672\tDEL\t\tBenign\r\n16\t33371443\t34285848\tDUP\t\tBenign\r\n16\t34493206\t34702366\tDUP\t\tBenign\r\n17\t14100118\t15442066\tDUP\tPMP22 (CMT1A)\tPathogenic\r\n17\t34437475\t34817481\tDUP\t\tBenign\r\n17\t44171888\t44297143\tDUP\t\tBenign\r\n22\t18894835\t21464119\tDEL\tDi George syndrom\tPathogenic\r\nX\t53250653\t53856257\tDUP\tHUWE1\tPathogenic\r\n"
  },
  {
    "path": "share/doc/AnnotSV/Example/test2.annotated.tsv",
    "content": "AnnotSV_ID\tSV_chrom\tSV_start\tSV_end\tSV_length\tSV_type\tSamples_ID\tID\tREF\tALT\tQUAL\tFILTER\tINFO\tFORMAT\tsample1\tsample2\tAnnotation_mode\tCytoBand\tGene_name\tClosest_left\tClosest_right\tGene_count\tTx\tTx_version\tTx_start\tTx_end\tOverlapped_tx_length\tOverlapped_CDS_length\tOverlapped_CDS_percent\tFrameshift\tExon_count\tLocation\tLocation2\tDist_nearest_SS\tNearest_SS_type\tIntersect_start\tIntersect_end\tRE_gene\tP_gain_phen\tP_gain_hpo\tP_gain_source\tP_gain_coord\tP_loss_phen\tP_loss_hpo\tP_loss_source\tP_loss_coord\tP_ins_phen\tP_ins_hpo\tP_ins_source\tP_ins_coord\tpo_P_gain_phen\tpo_P_gain_hpo\tpo_P_gain_source\tpo_P_gain_coord\tpo_P_gain_percent\tpo_P_loss_phen\tpo_P_loss_hpo\tpo_P_loss_source\tpo_P_loss_coord\tpo_P_loss_percent\tP_snvindel_nb\tP_snvindel_phen\tB_gain_source\tB_gain_coord\tB_gain_AFmax\tB_loss_source\tB_loss_coord\tB_loss_AFmax\tB_ins_source\tB_ins_coord\tB_ins_AFmax\tB_inv_source\tB_inv_coord\tB_inv_AFmax\tpo_B_gain_allG_source\tpo_B_gain_allG_coord\tpo_B_gain_someG_source\tpo_B_gain_someG_coord\tpo_B_loss_allG_source\tpo_B_loss_allG_coord\tpo_B_loss_someG_source\tpo_B_loss_someG_coord\tGC_content_left\tGC_content_right\tRepeat_coord_left\tRepeat_type_left\tRepeat_coord_right\tRepeat_type_right\tGap_left\tGap_right\tSegDup_left\tSegDup_right\tENCODE_blacklist_left\tENCODE_blacklist_characteristics_left\tENCODE_blacklist_right\tENCODE_blacklist_characteristics_right\tACMG\tHI\tTS\tDDD_HI_percent\tExAC_delZ\tExAC_dupZ\tExAC_cnvZ\tExAC_synZ\tExAC_misZ\tGenCC_disease\tGenCC_moi\tGenCC_classification\tGenCC_pmid\tNCBI_gene_ID\tHGNC_gene_ID\tOMIM_ID\tOMIM_phenotype\tOMIM_inheritance\tOMIM_morbid\tOMIM_morbid_candidate\tLOEUF_bin\tGnomAD_pLI\tExAC_pLI\tAnnotSV_ranking_score\tAnnotSV_ranking_criteria\tACMG_class\n1_14110160_14110400_DUP_1\t1\t14110160\t14110400\t240\tDUP\tsample1,sample2\t.\tG\t<DUP:TANDEM>\t999\tPASS\tEND=14110400\tGT\t0/1\t0/1\tfull\tp36.21\tPRDM2\tPDPN\tKAZN-AS1\t1\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tdbVar:nssv15156967;dbVar:nssv15156970;dbVar:nssv15149867;nssv15151118;dbVar:nssv15148982;dbVar:nssv15128051;dbVar:nssv17976696;dbVar:nssv15147542;dbVar:nssv15145882;dbVar:nssv15133500\t1:47852-249228449;1:82155-249218992;1:849468-249224684;1:6614946-16382506;1:8990091-16518045;1:10175556-16609644;1:11081809-15563167;1:12687422-14320473;1:13946475-18792666\t0.00;0.00;0.00;0.00;0.00;0.00;0.01;0.01;0.00\t\t\tdbVar:nssv15147705;dbVar:nssv17956141;dbVar:nssv15147183;dbVar:nssv18792748;dbVar:nssv15148223;dbVar:nssv15148835;dbVar:nssv18330519;dbVar:nssv15151350;dbVar:nssv15146487;dbVar:nssv15145965;dbVar:nssv15145980;dbVar:nssv15127569;dbVar:nssv15147187;dbVar:nssv15151873;dbVar:nssv15146553;dbVar:nssv15146554;dbVar:nssv15145869;dbVar:nssv15136410\t1:746609-15077159;1:849467-17525065;1:2922758-18015429;1:4481272-20530242;1:5423887-18686796;1:6363702-16125588;1:6758934-19287770;1:8850515-16272383;1:9094731-16767960;1:9488598-16142286;1:10324456-16107335;1:10448140-16107331;1:10681834-16847204;1:10722726-14267773;1:10869097-16748995;1:11181683-16650993;1:12784753-16361283;1:13727392-15683440\t0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.01;0.00;0.00;0.01;0.01\t\t\t\t\t\t\t\t\t\t\t\tIMH\t1:4599855-170869838;1:6507276-17027937;1:6515330-17019897;1:7662178-50846966\t0.3010\t\t\t\t\t\t\t\t\t0.395\t0.445\t1:14109929-14110078\tMIR3\t\t\t\t\t\t\t\t\t\t\t\t\t\t40.49\t0.415153458557427\t0.373434796722033\t0.547664002453622\t-1.78317179376506\t0.436072998472952\t\t\t\t\t\t\t\t\t\t\t\t0\t9.9996e-01\t9.9504e-01\t0.0\t1A (cf Gene_count, RE_gene, +0.00);2B (cf po_P_gain_source, TS, OMIM_morbid, +0.00);2L (PRDM2, +0.00);3A (1 gene, +0.00);5F (+0.00)\t3\n1_14110160_14110400_DUP_1\t1\t14110160\t14110400\t240\tDUP\tsample1,sample2\t.\tG\t<DUP:TANDEM>\t999\tPASS\tEND=14110400\tGT\t0/1\t0/1\tsplit\tp36.21\tPRDM2\t\t\t\tNM_001135610\t2\t14026682\t14151574\t241\t0\t0\tNA\t8\tintron6-intron6\tCDS\t32521\t3'\t14110159\t14110400\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tIMH\t1:4599855-170869838;1:6507276-17027937;1:6515330-17019897;1:7662178-50846966\t0.3010\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t40.49\t0.415153458557427\t0.373434796722033\t0.547664002453622\t-1.78317179376506\t0.436072998472952\t\t\t\t\t7799\tHGNC:9347\t\t\t\t\t\t0\t9.9996e-01\t9.9504e-01\t\t\tfull=3\n2_110138404_110222824_DEL_1\t2\t110138404\t110222824\t-84420\tDEL\tsample1,sample2\t.\tT\t<DEL>\t.\t.\tEND=110222824\tGT\t0/1\t0/1\tfull\tq12.3-q13\tSH3RF3\tMIR4266\tSEPTIN10\t1\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tdbVar:nssv17976961;dbVar:nssv15161685;nssv15161863;dbVar:nssv15174359;dbVar:nssv15174602;dbVar:nssv15148156;dbVar:nssv15152720;dbVar:nssv15147149;dbVar:nssv15147463;dbVar:nssv15151697\t2:2-243199373;2:12772-242783384;2:14239-243048760;2:15673-243101834;2:95344258-111359986;2:96353031-114045463;2:98288986-110968895;2:102327288-111548995;2:107096424-112235727\t0.03;0.03;0.03;0.03;0.53;0.48;0.67;0.92;1.64\t\t\tdbVar:nssv18326420;dbVar:nssv15155128;dbVar:nssv15124851;dbVar:nssv15146967;dbVar:nssv15152708;dbVar:nssv16254438;dbVar:nssv17969746;dbVar:nssv16207824;dbVar:nssv17977078;dbVar:nssv15119790;dbVar:nssv15152686;dbVar:nssv15605770;dbVar:nssv15147710;dbVar:nssv15147572\t2:11504319-111365996;2:40607043-146902764;2:50886433-243102476;2:106423311-115054828;2:107020783-111365996;2:107029681-113187742;2:108446956-110504318;2:108499810-110504318;2:109157563-110497991;2:109195458-110494136;2:109295036-110504318;2:109301075-110482930;2:109556628-117570152;2:109798248-125658380\t0.08;0.08;0.04;0.98;1.94;1.37;4.10;4.21;6.30;6.50;6.98;7.14;1.05;0.53\t\t\t\t\t\t\t\t\t\t\t\tIMH\t2:26280501-162970618;2:87141173-111334517;2:87428138-112522401;2:87449271-112501273;2:87515690-112330711;2:87531266-112315176;2:106984840-112624021\t0.3294\t\t\t\t\t\t\t\t\t0.000 (200 N)\t0.000 (200 N)\t\t\t\t\t2:110109338-110251337\t2:110109338-110251337\t\t\t\t\t\t\t\t\t\t65.25\t\t\t\t-0.881765523739939\t0.150060065037892\t\t\t\t\t\t\t\t\t\t\t\t2\t2.8368e-02\t9.8110e-01\t0.0\t1A (cf Gene_count, RE_gene, +0.00);2B (cf po_P_loss_source, HI, OMIM_morbid, +0.00;3A (1 gene, +0.00);5F (+0.00)\t3\n2_110138404_110222824_DEL_1\t2\t110138404\t110222824\t-84420\tDEL\tsample1,sample2\t.\tT\t<DEL>\t.\t.\tEND=110222824\tGT\t0/1\t0/1\tsplit\tq12.3-q13\tSH3RF3\t\t\t\tNM_001099289\t3\t109745660\t110262211\t84421\t0\t0\tNA\t10\tintron9-intron9\tCDS\t31011\t5'\t110138403\t110222824\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tIMH\t2:26280501-162970618;2:87141173-111334517;2:87428138-112522401;2:87449271-112501273;2:87515690-112330711;2:87531266-112315176;2:106984840-112624021\t0.3294\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t65.25\t\t\t\t-0.881765523739939\t0.150060065037892\t\t\t\t\t344558\tHGNC:24699\t\t\t\t\t\t2\t2.8368e-02\t9.8110e-01\t\t\tfull=3\n5_80251899_80261899_INS_1\t5\t80251899\t80261899\t\tINS\tsample1,sample2\t.\tT\t<INS>\t999\tPASS\tEND=80261899\tGT\t1/1\t0/1\tfull\tq14.1\tRASGRF2-AS1;RASGRF2\tMSH3\tCKMT2\t2\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tDHFR (morbid/RE=GH_enhancer+GH_promoter_enhancer)\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tdbVar:nssv15164761;dbVar:nssv15164765;dbVar:nssv15151111;nssv15151221;dbVar:nssv16206767;dbVar:nssv15120567\t5:13649-180905029;5:25329-180693344;5:113578-180719789;5:72790062-97478870;5:73459012-110145153\t0.01;0.01;0.01;0.04;0.03\t\t\tdbVar:nssv15151179\t5:17628742-176575720\t0.01\t\t\t\t\t\t\t\t\t\t\t\tIMH\t5:24758285-101693420;5:28691217-97582419\t0.2263\t\t\t\t\t\t\t\tchr5:80248529-80253459 dbVar\t0.450\t0.330\t5:80251821-80252359\tMER41A\t5:80261899-80261940\t(TG)n\t\t\t\t\t\t\t\t\t\t\t\t32.53\t1.25977458409673\t0.206923040395808\t0.647601778097669\t0.973590350721445\t3.58412504045464\t\t\t\t\t\t\t\t\t\t\t\t1\t1.5243e-01\t9.9874e-01\t\t\tNA\n5_80251899_80261899_INS_1\t5\t80251899\t80261899\t\tINS\tsample1,sample2\t.\tT\t<INS>\t999\tPASS\tEND=80261899\tGT\t1/1\t0/1\tsplit\tq14.1\tRASGRF2-AS1\t\t\t\tNR_105015\t1\t80243511\t80256726\t4828\t0\t0\tNA\t4\ttxStart-intron1\tUTR\t4599\t3'\t80251898\t80256726\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tIMH\t5:24758285-101693420;5:28691217-97582419\t0.2263\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t102524628\tHGNC:40499\t\t\t\t\t\t\t\t\t\t\tfull=NA\n5_80251899_80261899_INS_1\t5\t80251899\t80261899\t\tINS\tsample1,sample2\t.\tT\t<INS>\t999\tPASS\tEND=80261899\tGT\t1/1\t0/1\tsplit\tq14.1\tRASGRF2\t\t\t\tNM_006909\t3\t80256181\t80525981\t5718\t288\t7\tNA\t27\ttxStart-intron1\t5'UTR-CDS\t5054\t5'\t80256181\t80261899\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tIMH\t5:24758285-101693420;5:28691217-97582419\t0.2263\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t32.53\t1.25977458409673\t0.206923040395808\t0.647601778097669\t0.973590350721445\t3.58412504045464\t\t\t\t\t5924\tHGNC:9876\t\t\t\t\t\t1\t1.5243e-01\t9.9874e-01\t\t\tfull=NA\n"
  },
  {
    "path": "share/doc/AnnotSV/Example/test2.annotated.variantconvert.log",
    "content": "python3 /PROGS/EXTERN/AnnotSV/AnnotSV_dev/share/python3/variantconvert//src/variantconvert convert -i /PROGS/EXTERN/AnnotSV/AnnotSV_dev/share/doc/AnnotSV/Example/test2.annotated.tsv -o /PROGS/EXTERN/AnnotSV/AnnotSV_dev/share/doc/AnnotSV/Example/test2.annotated.vcf -c /PROGS/EXTERN/AnnotSV/AnnotSV_dev/share/python3/variantconvert//src/variantconvert/configs/GRCh37/annotsv3_from_vcf.combined.local.json\n\n2026-04-14 12:03:51 [INFO] running variantconvert 2.0.1\n/PROGS/EXTERN/AnnotSV/AnnotSV_dev/share/python3/variantconvert/src/variantconvert/converters/vcf_from_annotsv.py:59: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '[240.0 240.0 -84420.0 -84420.0 '.' '.' '.']' has dtype incompatible with float64, please explicitly cast to a compatible dtype first.\n  df.loc[:, df.columns != sample_col] = df.loc[:, df.columns != sample_col].fillna(\".\")\n/PROGS/EXTERN/AnnotSV/AnnotSV_dev/share/python3/variantconvert/src/variantconvert/converters/vcf_from_annotsv.py:59: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '[1.0 '.' 1.0 '.' 2.0 '.' '.']' has dtype incompatible with float64, please explicitly cast to a compatible dtype first.\n  df.loc[:, df.columns != sample_col] = df.loc[:, df.columns != sample_col].fillna(\".\")\n/PROGS/EXTERN/AnnotSV/AnnotSV_dev/share/python3/variantconvert/src/variantconvert/converters/vcf_from_annotsv.py:59: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '['.' 2.0 '.' 3.0 '.' 1.0 3.0]' has dtype incompatible with float64, please explicitly cast to a compatible dtype first.\n  df.loc[:, df.columns != sample_col] = df.loc[:, df.columns != sample_col].fillna(\".\")\n/PROGS/EXTERN/AnnotSV/AnnotSV_dev/share/python3/variantconvert/src/variantconvert/converters/vcf_from_annotsv.py:59: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '['.' 14026682.0 '.' 109745660.0 '.' 80243511.0 80256181.0]' has dtype incompatible with float64, please explicitly cast to a compatible dtype first.\n  df.loc[:, df.columns != sample_col] = df.loc[:, df.columns != sample_col].fillna(\".\")\n/PROGS/EXTERN/AnnotSV/AnnotSV_dev/share/python3/variantconvert/src/variantconvert/converters/vcf_from_annotsv.py:59: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '['.' 14151574.0 '.' 110262211.0 '.' 80256726.0 80525981.0]' has dtype incompatible with float64, please explicitly cast to a compatible dtype first.\n  df.loc[:, df.columns != sample_col] = df.loc[:, df.columns != sample_col].fillna(\".\")\n/PROGS/EXTERN/AnnotSV/AnnotSV_dev/share/python3/variantconvert/src/variantconvert/converters/vcf_from_annotsv.py:59: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '['.' 241.0 '.' 84421.0 '.' 4828.0 5718.0]' has dtype incompatible with float64, please explicitly cast to a compatible dtype first.\n  df.loc[:, df.columns != sample_col] = df.loc[:, df.columns != sample_col].fillna(\".\")\n/PROGS/EXTERN/AnnotSV/AnnotSV_dev/share/python3/variantconvert/src/variantconvert/converters/vcf_from_annotsv.py:59: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '['.' 0.0 '.' 0.0 '.' 0.0 288.0]' has dtype incompatible with float64, please explicitly cast to a compatible dtype first.\n  df.loc[:, df.columns != sample_col] = df.loc[:, df.columns != sample_col].fillna(\".\")\n/PROGS/EXTERN/AnnotSV/AnnotSV_dev/share/python3/variantconvert/src/variantconvert/converters/vcf_from_annotsv.py:59: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '['.' 0.0 '.' 0.0 '.' 0.0 7.0]' has dtype incompatible with float64, please explicitly cast to a compatible dtype first.\n  df.loc[:, df.columns != sample_col] = df.loc[:, df.columns != sample_col].fillna(\".\")\n/PROGS/EXTERN/AnnotSV/AnnotSV_dev/share/python3/variantconvert/src/variantconvert/converters/vcf_from_annotsv.py:59: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '['.' '.' '.' '.' '.' '.' '.']' has dtype incompatible with float64, please explicitly cast to a compatible dtype first.\n  df.loc[:, df.columns != sample_col] = df.loc[:, df.columns != sample_col].fillna(\".\")\n/PROGS/EXTERN/AnnotSV/AnnotSV_dev/share/python3/variantconvert/src/variantconvert/converters/vcf_from_annotsv.py:59: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '['.' 8.0 '.' 10.0 '.' 4.0 27.0]' has dtype incompatible with float64, please explicitly cast to a compatible dtype first.\n  df.loc[:, df.columns != sample_col] = df.loc[:, df.columns != sample_col].fillna(\".\")\n/PROGS/EXTERN/AnnotSV/AnnotSV_dev/share/python3/variantconvert/src/variantconvert/converters/vcf_from_annotsv.py:59: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '['.' 32521.0 '.' 31011.0 '.' 4599.0 5054.0]' has dtype incompatible with float64, please explicitly cast to a compatible dtype first.\n  df.loc[:, df.columns != sample_col] = df.loc[:, df.columns != sample_col].fillna(\".\")\n/PROGS/EXTERN/AnnotSV/AnnotSV_dev/share/python3/variantconvert/src/variantconvert/converters/vcf_from_annotsv.py:59: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '['.' 14110159.0 '.' 110138403.0 '.' 80251898.0 80256181.0]' has dtype incompatible with float64, please explicitly cast to a compatible dtype first.\n  df.loc[:, df.columns != sample_col] = df.loc[:, df.columns != sample_col].fillna(\".\")\n/PROGS/EXTERN/AnnotSV/AnnotSV_dev/share/python3/variantconvert/src/variantconvert/converters/vcf_from_annotsv.py:59: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '['.' 14110400.0 '.' 110222824.0 '.' 80256726.0 80261899.0]' has dtype incompatible with float64, please explicitly cast to a compatible dtype first.\n  df.loc[:, df.columns != sample_col] = df.loc[:, df.columns != sample_col].fillna(\".\")\n/PROGS/EXTERN/AnnotSV/AnnotSV_dev/share/python3/variantconvert/src/variantconvert/converters/vcf_from_annotsv.py:59: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '['.' '.' '.' '.' '.' '.' '.']' has dtype incompatible with float64, please explicitly cast to a compatible dtype first.\n  df.loc[:, df.columns != sample_col] = df.loc[:, df.columns != sample_col].fillna(\".\")\n/PROGS/EXTERN/AnnotSV/AnnotSV_dev/share/python3/variantconvert/src/variantconvert/converters/vcf_from_annotsv.py:59: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '['.' '.' '.' '.' '.' '.' '.']' has dtype incompatible with float64, please explicitly cast to a compatible dtype first.\n  df.loc[:, df.columns != sample_col] = df.loc[:, df.columns != sample_col].fillna(\".\")\n/PROGS/EXTERN/AnnotSV/AnnotSV_dev/share/python3/variantconvert/src/variantconvert/converters/vcf_from_annotsv.py:59: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '['.' '.' '.' '.' '.' '.' '.']' has dtype incompatible with float64, please explicitly cast to a compatible dtype first.\n  df.loc[:, df.columns != sample_col] = df.loc[:, df.columns != sample_col].fillna(\".\")\n/PROGS/EXTERN/AnnotSV/AnnotSV_dev/share/python3/variantconvert/src/variantconvert/converters/vcf_from_annotsv.py:59: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '['.' '.' '.' '.' '.' '.' '.']' has dtype incompatible with float64, please explicitly cast to a compatible dtype first.\n  df.loc[:, df.columns != sample_col] = df.loc[:, df.columns != sample_col].fillna(\".\")\n/PROGS/EXTERN/AnnotSV/AnnotSV_dev/share/python3/variantconvert/src/variantconvert/converters/vcf_from_annotsv.py:59: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '['.' '.' '.' '.' '.' '.' '.']' has dtype incompatible with float64, please explicitly cast to a compatible dtype first.\n  df.loc[:, df.columns != sample_col] = df.loc[:, df.columns != sample_col].fillna(\".\")\n/PROGS/EXTERN/AnnotSV/AnnotSV_dev/share/python3/variantconvert/src/variantconvert/converters/vcf_from_annotsv.py:59: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '['.' '.' '.' '.' '.' '.' '.']' has dtype incompatible with float64, please explicitly cast to a compatible dtype first.\n  df.loc[:, df.columns != sample_col] = df.loc[:, df.columns != sample_col].fillna(\".\")\n/PROGS/EXTERN/AnnotSV/AnnotSV_dev/share/python3/variantconvert/src/variantconvert/converters/vcf_from_annotsv.py:59: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '['.' '.' '.' '.' '.' '.' '.']' has dtype incompatible with float64, please explicitly cast to a compatible dtype first.\n  df.loc[:, df.columns != sample_col] = df.loc[:, df.columns != sample_col].fillna(\".\")\n/PROGS/EXTERN/AnnotSV/AnnotSV_dev/share/python3/variantconvert/src/variantconvert/converters/vcf_from_annotsv.py:59: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '['.' '.' '.' '.' '.' '.' '.']' has dtype incompatible with float64, please explicitly cast to a compatible dtype first.\n  df.loc[:, df.columns != sample_col] = df.loc[:, df.columns != sample_col].fillna(\".\")\n/PROGS/EXTERN/AnnotSV/AnnotSV_dev/share/python3/variantconvert/src/variantconvert/converters/vcf_from_annotsv.py:59: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '['.' '.' '.' '.' '.' '.' '.']' has dtype incompatible with float64, please explicitly cast to a compatible dtype first.\n  df.loc[:, df.columns != sample_col] = df.loc[:, df.columns != sample_col].fillna(\".\")\n/PROGS/EXTERN/AnnotSV/AnnotSV_dev/share/python3/variantconvert/src/variantconvert/converters/vcf_from_annotsv.py:59: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '['.' '.' '.' '.' '.' '.' '.']' has dtype incompatible with float64, please explicitly cast to a compatible dtype first.\n  df.loc[:, df.columns != sample_col] = df.loc[:, df.columns != sample_col].fillna(\".\")\n/PROGS/EXTERN/AnnotSV/AnnotSV_dev/share/python3/variantconvert/src/variantconvert/converters/vcf_from_annotsv.py:59: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '['.' '.' '.' '.' '.' '.' '.']' has dtype incompatible with float64, please explicitly cast to a compatible dtype first.\n  df.loc[:, df.columns != sample_col] = df.loc[:, df.columns != sample_col].fillna(\".\")\n/PROGS/EXTERN/AnnotSV/AnnotSV_dev/share/python3/variantconvert/src/variantconvert/converters/vcf_from_annotsv.py:59: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '['.' '.' '.' '.' '.' '.' '.']' has dtype incompatible with float64, please explicitly cast to a compatible dtype first.\n  df.loc[:, df.columns != sample_col] = df.loc[:, df.columns != sample_col].fillna(\".\")\n/PROGS/EXTERN/AnnotSV/AnnotSV_dev/share/python3/variantconvert/src/variantconvert/converters/vcf_from_annotsv.py:59: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '['.' '.' '.' '.' '.' '.' '.']' has dtype incompatible with float64, please explicitly cast to a compatible dtype first.\n  df.loc[:, df.columns != sample_col] = df.loc[:, df.columns != sample_col].fillna(\".\")\n/PROGS/EXTERN/AnnotSV/AnnotSV_dev/share/python3/variantconvert/src/variantconvert/converters/vcf_from_annotsv.py:59: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '['.' '.' '.' '.' '.' '.' '.']' has dtype incompatible with float64, please explicitly cast to a compatible dtype first.\n  df.loc[:, df.columns != sample_col] = df.loc[:, df.columns != sample_col].fillna(\".\")\n/PROGS/EXTERN/AnnotSV/AnnotSV_dev/share/python3/variantconvert/src/variantconvert/converters/vcf_from_annotsv.py:59: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '['.' '.' '.' '.' '.' '.' '.']' has dtype incompatible with float64, please explicitly cast to a compatible dtype first.\n  df.loc[:, df.columns != sample_col] = df.loc[:, df.columns != sample_col].fillna(\".\")\n/PROGS/EXTERN/AnnotSV/AnnotSV_dev/share/python3/variantconvert/src/variantconvert/converters/vcf_from_annotsv.py:59: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '['.' '.' '.' '.' '.' '.' '.']' has dtype incompatible with float64, please explicitly cast to a compatible dtype first.\n  df.loc[:, df.columns != sample_col] = df.loc[:, df.columns != sample_col].fillna(\".\")\n/PROGS/EXTERN/AnnotSV/AnnotSV_dev/share/python3/variantconvert/src/variantconvert/converters/vcf_from_annotsv.py:59: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '['.' '.' '.' '.' '.' '.' '.']' has dtype incompatible with float64, please explicitly cast to a compatible dtype first.\n  df.loc[:, df.columns != sample_col] = df.loc[:, df.columns != sample_col].fillna(\".\")\n/PROGS/EXTERN/AnnotSV/AnnotSV_dev/share/python3/variantconvert/src/variantconvert/converters/vcf_from_annotsv.py:59: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '['.' '.' '.' '.' '.' '.' '.']' has dtype incompatible with float64, please explicitly cast to a compatible dtype first.\n  df.loc[:, df.columns != sample_col] = df.loc[:, df.columns != sample_col].fillna(\".\")\n/PROGS/EXTERN/AnnotSV/AnnotSV_dev/share/python3/variantconvert/src/variantconvert/converters/vcf_from_annotsv.py:59: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '['.' '.' '.' '.' '.' '.' '.']' has dtype incompatible with float64, please explicitly cast to a compatible dtype first.\n  df.loc[:, df.columns != sample_col] = df.loc[:, df.columns != sample_col].fillna(\".\")\n/PROGS/EXTERN/AnnotSV/AnnotSV_dev/share/python3/variantconvert/src/variantconvert/converters/vcf_from_annotsv.py:59: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '['.' '.' '.' '.' '.' '.' '.']' has dtype incompatible with float64, please explicitly cast to a compatible dtype first.\n  df.loc[:, df.columns != sample_col] = df.loc[:, df.columns != sample_col].fillna(\".\")\n/PROGS/EXTERN/AnnotSV/AnnotSV_dev/share/python3/variantconvert/src/variantconvert/converters/vcf_from_annotsv.py:59: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '['.' '.' '.' '.' '.' '.' '.']' has dtype incompatible with float64, please explicitly cast to a compatible dtype first.\n  df.loc[:, df.columns != sample_col] = df.loc[:, df.columns != sample_col].fillna(\".\")\n/PROGS/EXTERN/AnnotSV/AnnotSV_dev/share/python3/variantconvert/src/variantconvert/converters/vcf_from_annotsv.py:59: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '['.' '.' '.' '.' '.' '.' '.']' has dtype incompatible with float64, please explicitly cast to a compatible dtype first.\n  df.loc[:, df.columns != sample_col] = df.loc[:, df.columns != sample_col].fillna(\".\")\n/PROGS/EXTERN/AnnotSV/AnnotSV_dev/share/python3/variantconvert/src/variantconvert/converters/vcf_from_annotsv.py:59: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '['.' '.' '.' '.' '.' '.' '.']' has dtype incompatible with float64, please explicitly cast to a compatible dtype first.\n  df.loc[:, df.columns != sample_col] = df.loc[:, df.columns != sample_col].fillna(\".\")\n/PROGS/EXTERN/AnnotSV/AnnotSV_dev/share/python3/variantconvert/src/variantconvert/converters/vcf_from_annotsv.py:59: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '['.' '.' '.' '.' '.' '.' '.']' has dtype incompatible with float64, please explicitly cast to a compatible dtype first.\n  df.loc[:, df.columns != sample_col] = df.loc[:, df.columns != sample_col].fillna(\".\")\n/PROGS/EXTERN/AnnotSV/AnnotSV_dev/share/python3/variantconvert/src/variantconvert/converters/vcf_from_annotsv.py:59: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '['.' '.' '.' '.' '.' '.' '.']' has dtype incompatible with float64, please explicitly cast to a compatible dtype first.\n  df.loc[:, df.columns != sample_col] = df.loc[:, df.columns != sample_col].fillna(\".\")\n/PROGS/EXTERN/AnnotSV/AnnotSV_dev/share/python3/variantconvert/src/variantconvert/converters/vcf_from_annotsv.py:59: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '['.' '.' '.' '.' '.' '.' '.']' has dtype incompatible with float64, please explicitly cast to a compatible dtype first.\n  df.loc[:, df.columns != sample_col] = df.loc[:, df.columns != sample_col].fillna(\".\")\n/PROGS/EXTERN/AnnotSV/AnnotSV_dev/share/python3/variantconvert/src/variantconvert/converters/vcf_from_annotsv.py:59: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '['.' '.' '.' '.' '.' '.' '.']' has dtype incompatible with float64, please explicitly cast to a compatible dtype first.\n  df.loc[:, df.columns != sample_col] = df.loc[:, df.columns != sample_col].fillna(\".\")\n/PROGS/EXTERN/AnnotSV/AnnotSV_dev/share/python3/variantconvert/src/variantconvert/converters/vcf_from_annotsv.py:59: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '['.' '.' '.' '.' '.' '.' '.']' has dtype incompatible with float64, please explicitly cast to a compatible dtype first.\n  df.loc[:, df.columns != sample_col] = df.loc[:, df.columns != sample_col].fillna(\".\")\n/PROGS/EXTERN/AnnotSV/AnnotSV_dev/share/python3/variantconvert/src/variantconvert/converters/vcf_from_annotsv.py:59: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '['.' '.' '.' '.' '.' '.' '.']' has dtype incompatible with float64, please explicitly cast to a compatible dtype first.\n  df.loc[:, df.columns != sample_col] = df.loc[:, df.columns != sample_col].fillna(\".\")\n/PROGS/EXTERN/AnnotSV/AnnotSV_dev/share/python3/variantconvert/src/variantconvert/converters/vcf_from_annotsv.py:59: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '['.' '.' '.' '.' '.' '.' '.']' has dtype incompatible with float64, please explicitly cast to a compatible dtype first.\n  df.loc[:, df.columns != sample_col] = df.loc[:, df.columns != sample_col].fillna(\".\")\n/PROGS/EXTERN/AnnotSV/AnnotSV_dev/share/python3/variantconvert/src/variantconvert/converters/vcf_from_annotsv.py:59: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '['.' '.' '.' '.' '.' '.' '.']' has dtype incompatible with float64, please explicitly cast to a compatible dtype first.\n  df.loc[:, df.columns != sample_col] = df.loc[:, df.columns != sample_col].fillna(\".\")\n/PROGS/EXTERN/AnnotSV/AnnotSV_dev/share/python3/variantconvert/src/variantconvert/converters/vcf_from_annotsv.py:59: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '['.' '.' '.' '.' '.' '.' '.']' has dtype incompatible with float64, please explicitly cast to a compatible dtype first.\n  df.loc[:, df.columns != sample_col] = df.loc[:, df.columns != sample_col].fillna(\".\")\n/PROGS/EXTERN/AnnotSV/AnnotSV_dev/share/python3/variantconvert/src/variantconvert/converters/vcf_from_annotsv.py:59: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '['.' '.' '.' '.' '.' '.' '.']' has dtype incompatible with float64, please explicitly cast to a compatible dtype first.\n  df.loc[:, df.columns != sample_col] = df.loc[:, df.columns != sample_col].fillna(\".\")\n/PROGS/EXTERN/AnnotSV/AnnotSV_dev/share/python3/variantconvert/src/variantconvert/converters/vcf_from_annotsv.py:59: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '['.' '.' '.' '.' '.' '.' '.']' has dtype incompatible with float64, please explicitly cast to a compatible dtype first.\n  df.loc[:, df.columns != sample_col] = df.loc[:, df.columns != sample_col].fillna(\".\")\n/PROGS/EXTERN/AnnotSV/AnnotSV_dev/share/python3/variantconvert/src/variantconvert/converters/vcf_from_annotsv.py:59: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '['.' '.' '.' '.' '.' '.' '.']' has dtype incompatible with float64, please explicitly cast to a compatible dtype first.\n  df.loc[:, df.columns != sample_col] = df.loc[:, df.columns != sample_col].fillna(\".\")\n/PROGS/EXTERN/AnnotSV/AnnotSV_dev/share/python3/variantconvert/src/variantconvert/converters/vcf_from_annotsv.py:59: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '['.' '.' '.' '.' '.' '.' '.']' has dtype incompatible with float64, please explicitly cast to a compatible dtype first.\n  df.loc[:, df.columns != sample_col] = df.loc[:, df.columns != sample_col].fillna(\".\")\n/PROGS/EXTERN/AnnotSV/AnnotSV_dev/share/python3/variantconvert/src/variantconvert/converters/vcf_from_annotsv.py:59: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '['.' '.' '.' '.' '.' '.' '.']' has dtype incompatible with float64, please explicitly cast to a compatible dtype first.\n  df.loc[:, df.columns != sample_col] = df.loc[:, df.columns != sample_col].fillna(\".\")\n/PROGS/EXTERN/AnnotSV/AnnotSV_dev/share/python3/variantconvert/src/variantconvert/converters/vcf_from_annotsv.py:59: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '['.' '.' '.' '.' '.' '.' '.']' has dtype incompatible with float64, please explicitly cast to a compatible dtype first.\n  df.loc[:, df.columns != sample_col] = df.loc[:, df.columns != sample_col].fillna(\".\")\n/PROGS/EXTERN/AnnotSV/AnnotSV_dev/share/python3/variantconvert/src/variantconvert/converters/vcf_from_annotsv.py:59: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '['.' '.' '.' '.' '.' '.' '.']' has dtype incompatible with float64, please explicitly cast to a compatible dtype first.\n  df.loc[:, df.columns != sample_col] = df.loc[:, df.columns != sample_col].fillna(\".\")\n/PROGS/EXTERN/AnnotSV/AnnotSV_dev/share/python3/variantconvert/src/variantconvert/converters/vcf_from_annotsv.py:59: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '['.' '.' '.' '.' '.' '.' '.']' has dtype incompatible with float64, please explicitly cast to a compatible dtype first.\n  df.loc[:, df.columns != sample_col] = df.loc[:, df.columns != sample_col].fillna(\".\")\n/PROGS/EXTERN/AnnotSV/AnnotSV_dev/share/python3/variantconvert/src/variantconvert/converters/vcf_from_annotsv.py:59: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '['.' '.' '.' '.' '.' '.' '.']' has dtype incompatible with float64, please explicitly cast to a compatible dtype first.\n  df.loc[:, df.columns != sample_col] = df.loc[:, df.columns != sample_col].fillna(\".\")\n/PROGS/EXTERN/AnnotSV/AnnotSV_dev/share/python3/variantconvert/src/variantconvert/converters/vcf_from_annotsv.py:59: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '['.' '.' '.' '.' '.' '.' '.']' has dtype incompatible with float64, please explicitly cast to a compatible dtype first.\n  df.loc[:, df.columns != sample_col] = df.loc[:, df.columns != sample_col].fillna(\".\")\n/PROGS/EXTERN/AnnotSV/AnnotSV_dev/share/python3/variantconvert/src/variantconvert/converters/vcf_from_annotsv.py:59: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '['.' '.' '.' '.' '.' '.' '.']' has dtype incompatible with float64, please explicitly cast to a compatible dtype first.\n  df.loc[:, df.columns != sample_col] = df.loc[:, df.columns != sample_col].fillna(\".\")\n/PROGS/EXTERN/AnnotSV/AnnotSV_dev/share/python3/variantconvert/src/variantconvert/converters/vcf_from_annotsv.py:59: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '[40.49 40.49 65.25 65.25 32.53 '.' 32.53]' has dtype incompatible with float64, please explicitly cast to a compatible dtype first.\n  df.loc[:, df.columns != sample_col] = df.loc[:, df.columns != sample_col].fillna(\".\")\n/PROGS/EXTERN/AnnotSV/AnnotSV_dev/share/python3/variantconvert/src/variantconvert/converters/vcf_from_annotsv.py:59: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '[0.415153458557427 0.415153458557427 '.' '.' 1.25977458409673 '.'\n 1.25977458409673]' has dtype incompatible with float64, please explicitly cast to a compatible dtype first.\n  df.loc[:, df.columns != sample_col] = df.loc[:, df.columns != sample_col].fillna(\".\")\n/PROGS/EXTERN/AnnotSV/AnnotSV_dev/share/python3/variantconvert/src/variantconvert/converters/vcf_from_annotsv.py:59: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '[0.373434796722033 0.373434796722033 '.' '.' 0.206923040395808 '.'\n 0.206923040395808]' has dtype incompatible with float64, please explicitly cast to a compatible dtype first.\n  df.loc[:, df.columns != sample_col] = df.loc[:, df.columns != sample_col].fillna(\".\")\n/PROGS/EXTERN/AnnotSV/AnnotSV_dev/share/python3/variantconvert/src/variantconvert/converters/vcf_from_annotsv.py:59: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '[0.547664002453622 0.547664002453622 '.' '.' 0.647601778097669 '.'\n 0.647601778097669]' has dtype incompatible with float64, please explicitly cast to a compatible dtype first.\n  df.loc[:, df.columns != sample_col] = df.loc[:, df.columns != sample_col].fillna(\".\")\n/PROGS/EXTERN/AnnotSV/AnnotSV_dev/share/python3/variantconvert/src/variantconvert/converters/vcf_from_annotsv.py:59: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '[-1.78317179376506 -1.78317179376506 -0.881765523739939 -0.881765523739939\n 0.973590350721445 '.' 0.973590350721445]' has dtype incompatible with float64, please explicitly cast to a compatible dtype first.\n  df.loc[:, df.columns != sample_col] = df.loc[:, df.columns != sample_col].fillna(\".\")\n/PROGS/EXTERN/AnnotSV/AnnotSV_dev/share/python3/variantconvert/src/variantconvert/converters/vcf_from_annotsv.py:59: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '[0.436072998472952 0.436072998472952 0.150060065037892 0.150060065037892\n 3.58412504045464 '.' 3.58412504045464]' has dtype incompatible with float64, please explicitly cast to a compatible dtype first.\n  df.loc[:, df.columns != sample_col] = df.loc[:, df.columns != sample_col].fillna(\".\")\n/PROGS/EXTERN/AnnotSV/AnnotSV_dev/share/python3/variantconvert/src/variantconvert/converters/vcf_from_annotsv.py:59: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '['.' '.' '.' '.' '.' '.' '.']' has dtype incompatible with float64, please explicitly cast to a compatible dtype first.\n  df.loc[:, df.columns != sample_col] = df.loc[:, df.columns != sample_col].fillna(\".\")\n/PROGS/EXTERN/AnnotSV/AnnotSV_dev/share/python3/variantconvert/src/variantconvert/converters/vcf_from_annotsv.py:59: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '['.' '.' '.' '.' '.' '.' '.']' has dtype incompatible with float64, please explicitly cast to a compatible dtype first.\n  df.loc[:, df.columns != sample_col] = df.loc[:, df.columns != sample_col].fillna(\".\")\n/PROGS/EXTERN/AnnotSV/AnnotSV_dev/share/python3/variantconvert/src/variantconvert/converters/vcf_from_annotsv.py:59: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '['.' '.' '.' '.' '.' '.' '.']' has dtype incompatible with float64, please explicitly cast to a compatible dtype first.\n  df.loc[:, df.columns != sample_col] = df.loc[:, df.columns != sample_col].fillna(\".\")\n/PROGS/EXTERN/AnnotSV/AnnotSV_dev/share/python3/variantconvert/src/variantconvert/converters/vcf_from_annotsv.py:59: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '['.' '.' '.' '.' '.' '.' '.']' has dtype incompatible with float64, please explicitly cast to a compatible dtype first.\n  df.loc[:, df.columns != sample_col] = df.loc[:, df.columns != sample_col].fillna(\".\")\n/PROGS/EXTERN/AnnotSV/AnnotSV_dev/share/python3/variantconvert/src/variantconvert/converters/vcf_from_annotsv.py:59: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '['.' 7799.0 '.' 344558.0 '.' 102524628.0 5924.0]' has dtype incompatible with float64, please explicitly cast to a compatible dtype first.\n  df.loc[:, df.columns != sample_col] = df.loc[:, df.columns != sample_col].fillna(\".\")\n/PROGS/EXTERN/AnnotSV/AnnotSV_dev/share/python3/variantconvert/src/variantconvert/converters/vcf_from_annotsv.py:59: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '['.' '.' '.' '.' '.' '.' '.']' has dtype incompatible with float64, please explicitly cast to a compatible dtype first.\n  df.loc[:, df.columns != sample_col] = df.loc[:, df.columns != sample_col].fillna(\".\")\n/PROGS/EXTERN/AnnotSV/AnnotSV_dev/share/python3/variantconvert/src/variantconvert/converters/vcf_from_annotsv.py:59: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '['.' '.' '.' '.' '.' '.' '.']' has dtype incompatible with float64, please explicitly cast to a compatible dtype first.\n  df.loc[:, df.columns != sample_col] = df.loc[:, df.columns != sample_col].fillna(\".\")\n/PROGS/EXTERN/AnnotSV/AnnotSV_dev/share/python3/variantconvert/src/variantconvert/converters/vcf_from_annotsv.py:59: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '['.' '.' '.' '.' '.' '.' '.']' has dtype incompatible with float64, please explicitly cast to a compatible dtype first.\n  df.loc[:, df.columns != sample_col] = df.loc[:, df.columns != sample_col].fillna(\".\")\n/PROGS/EXTERN/AnnotSV/AnnotSV_dev/share/python3/variantconvert/src/variantconvert/converters/vcf_from_annotsv.py:59: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '['.' '.' '.' '.' '.' '.' '.']' has dtype incompatible with float64, please explicitly cast to a compatible dtype first.\n  df.loc[:, df.columns != sample_col] = df.loc[:, df.columns != sample_col].fillna(\".\")\n/PROGS/EXTERN/AnnotSV/AnnotSV_dev/share/python3/variantconvert/src/variantconvert/converters/vcf_from_annotsv.py:59: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '['.' '.' '.' '.' '.' '.' '.']' has dtype incompatible with float64, please explicitly cast to a compatible dtype first.\n  df.loc[:, df.columns != sample_col] = df.loc[:, df.columns != sample_col].fillna(\".\")\n/PROGS/EXTERN/AnnotSV/AnnotSV_dev/share/python3/variantconvert/src/variantconvert/converters/vcf_from_annotsv.py:59: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '[0.0 0.0 2.0 2.0 1.0 '.' 1.0]' has dtype incompatible with float64, please explicitly cast to a compatible dtype first.\n  df.loc[:, df.columns != sample_col] = df.loc[:, df.columns != sample_col].fillna(\".\")\n/PROGS/EXTERN/AnnotSV/AnnotSV_dev/share/python3/variantconvert/src/variantconvert/converters/vcf_from_annotsv.py:59: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '[0.99996 0.99996 0.028368 0.028368 0.15243 '.' 0.15243]' has dtype incompatible with float64, please explicitly cast to a compatible dtype first.\n  df.loc[:, df.columns != sample_col] = df.loc[:, df.columns != sample_col].fillna(\".\")\n/PROGS/EXTERN/AnnotSV/AnnotSV_dev/share/python3/variantconvert/src/variantconvert/converters/vcf_from_annotsv.py:59: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '[0.99504 0.99504 0.9811 0.9811 0.99874 '.' 0.99874]' has dtype incompatible with float64, please explicitly cast to a compatible dtype first.\n  df.loc[:, df.columns != sample_col] = df.loc[:, df.columns != sample_col].fillna(\".\")\n/PROGS/EXTERN/AnnotSV/AnnotSV_dev/share/python3/variantconvert/src/variantconvert/converters/vcf_from_annotsv.py:59: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error of pandas. Value '[0.0 '.' 0.0 '.' '.' '.' '.']' has dtype incompatible with float64, please explicitly cast to a compatible dtype first.\n  df.loc[:, df.columns != sample_col] = df.loc[:, df.columns != sample_col].fillna(\".\")\n2026-04-14 12:03:51 [INFO] variantconvert finished.\n"
  },
  {
    "path": "share/doc/AnnotSV/Example/test2.annotated.vcf",
    "content": "##fileformat=VCFv4.2\n##fileDate=14/04/2026\n##inputFile=/PROGS/EXTERN/AnnotSV/AnnotSV_dev/share/doc/AnnotSV/Example/test2.annotated.tsv\n##source=variantconvert from AnnotSV\n##variantconvertVersion=2.0.1\n##variantconvertMode=combined\n##FILTER=<ID=PASS,Description=\"Passed filter\">\n##ALT=<ID=DUP,Description=\"Duplication\">\n##ALT=<ID=DEL,Description=\"Deletion\">\n##INFO=<ID=AnnotSV_ID,Number=1,Type=String,Description=\"AnnotSV ID\">\n##INFO=<ID=SV_chrom,Number=1,Type=String,Description=\"Name of the chromosome\">\n##INFO=<ID=SV_start,Number=1,Type=Integer,Description=\"Starting position of the SV in the chromosome\">\n##INFO=<ID=END,Number=1,Type=Integer,Description=\"Ending position of the SV in the chromosome\">\n##INFO=<ID=SVLEN,Number=1,Type=Integer,Description=\"Length of the SV (bp) (deletions have negative values)\">\n##INFO=<ID=SVTYPE,Number=1,Type=String,Description=\"Type of the SV (DEL, DUP, ...)\">\n##INFO=<ID=Samples_ID,Number=1,Type=String,Description=\"List of the samples ID for which the SV was called (according to the SV input file)\">\n##INFO=<ID=REF,Number=1,Type=String,Description=\"Nucleotide sequence in the reference genome (extracted only from a VCF input file)\">\n##INFO=<ID=ALT,Number=1,Type=String,Description=\"Alternate nucleotide sequence (extracted only from a VCF input file)\">\n##INFO=<ID='SampleID',Number=1,Type=String,Description=\"The sample ID column from a VCF file\">\n##INFO=<ID=Annotation_mode,Number=1,Type=String,Description=\"Indicate the type of annotation lines generated: annotation on the SV full length ('full'), annotation on each gene overlapped by the SV ('split')\">\n##INFO=<ID=Gene_name,Number=.,Type=String,Description=\"Gene symbol\">\n##INFO=<ID=Gene_count,Number=1,Type=Integer,Description=\"Number of overlapped genes with the SV\">\n##INFO=<ID=Tx,Number=1,Type=String,Description=\"Transcript symbol\">\n##INFO=<ID=Tx_start,Number=1,Type=Integer,Description=\"Starting position of the transcript\">\n##INFO=<ID=Tx_end,Number=1,Type=Integer,Description=\"Ending position of the transcript\">\n##INFO=<ID=Overlapped_tx_length,Number=1,Type=Integer,Description=\"Length of the transcript (bp) overlapping with the SV\">\n##INFO=<ID=Overlapped_CDS_length,Number=1,Type=Integer,Description=\"Length of the CoDing Sequence (CDS) (bp) overlapped with the SV\">\n##INFO=<ID=Overlapped_CDS_percent,Number=1,Type=Integer,Description=\"Percent of the CoDing Sequence (CDS) (bp) overlapped with the SV\">\n##INFO=<ID=Frameshift,Number=1,Type=String,Description=\"Indicates if the CDS length is not divisible by three (yes or no)\">\n##INFO=<ID=Exon_count,Number=1,Type=Integer,Description=\"Number of exons of the transcript\">\n##INFO=<ID=Location,Number=1,Type=String,Description=\"SV location in the gene's. Values: txStart, txEnd, exon'i', intron'i' e.g. txStart-exon3\">\n##INFO=<ID=Location2,Number=1,Type=String,Description=\"SV location in the gene's coding regions. Values: UTR (no CDS in the gene), 5'UTR (before the CDS start), 3'UTR (after the CDS end), CDS (between the CDS start and the CDS end, can be in an exon or an intron). e.g. 3'UTR-CDS\">\n##INFO=<ID=Dist_nearest_SS,Number=1,Type=Integer,Description=\"Absolute distance to nearest splice site after considering exonic and intronic SV breakpoints\">\n##INFO=<ID=Nearest_SS_type,Number=1,Type=String,Description=\"Nearest splice site type: 5' (donor) or 3' (acceptor)\">\n##INFO=<ID=Intersect_start,Number=1,Type=Integer,Description=\"Start position of the intersection between the SV and a transcript\">\n##INFO=<ID=Intersect_end,Number=1,Type=Integer,Description=\"End position of the intersection between the SV and a transcript\">\n##INFO=<ID=RE_gene,Number=1,Type=String,Description=\"Name of the genes regulated by a regulatory element overlapped with the SV to annotate. When available, the regulated gene name is detailed with associated haploinsufficiency (HI), triplosensitivity (TS), Exomiser (EX) scores, OMIM and candidate genes. (For the filtering output, see the -REselect1 and -REselect2 options)\">\n##INFO=<ID=B_gain_source,Number=1,Type=String,Description=\"Origin of the benign gain genomic regions completely overlapping the SV to annotate: gnomAD, ClinVar (CLN), ClinGen (TS40), DGV (dgv, nsv or esv), DDD, 1000 genomes (1000g), Ira M. Hall's lab (IMH), Children's Mercy Research Institute (CMRI)\">\n##INFO=<ID=B_gain_coord,Number=1,Type=String,Description=\"Coordinates of the benign gain genomic regions completely overlapping the SV to annotate\">\n##INFO=<ID=B_gain_AFmax,Number=1,Type=Float,Description=\"Maximum allele frequency of the reported benign gain genomic regions (if available)\">\n##INFO=<ID=B_loss_source,Number=1,Type=String,Description=\"Origin of the benign loss genomic regions completely overlapping the SV to annotate: gnomAD, ClinVar (CLN), ClinGen (HI40), DGV (dgv, nsv or esv), DDD, 1000 genomes (1000g), Ira M. Hall's lab (IMH), Children's Mercy Research Institute (CMRI)\">\n##INFO=<ID=B_loss_coord,Number=1,Type=String,Description=\"Coordinates of the benign loss genomic regions completely overlapping the SV to annotate\">\n##INFO=<ID=B_loss_AFmax,Number=1,Type=Float,Description=\"Maximum allele frequency of the reported benign loss genomic regions (if available)\">\n##INFO=<ID=B_ins_source,Number=1,Type=String,Description=\"Origin of the benign insertion genomic regions completely overlapping the SV to annotate: gnomAD, ClinVar (CLN), 1000 genomes (1000g), Ira M. Hall's lab (IMH), Children's Mercy Research Institute (CMRI)\">\n##INFO=<ID=B_ins_coord,Number=1,Type=String,Description=\"Coordinates of the benign insertion genomic regions completely overlapping the SV to annotate\">\n##INFO=<ID=B_ins_AFmax,Number=1,Type=Float,Description=\"Maximum allele frequency of the reported benign insertion genomic regions (if available)\">\n##INFO=<ID=B_inv_source,Number=1,Type=String,Description=\"Origin of the benign inversion genomic regions completely overlapping the SV to annotate: gnomAD, 1000 genomes (1000g), Ira M. Hall's lab (IMH), Children's Mercy Research Institute (CMRI)\">\n##INFO=<ID=B_inv_coord,Number=1,Type=String,Description=\"Coordinates of the benign inversion genomic regions completely overlapping the SV to annotate\">\n##INFO=<ID=B_inv_AFmax,Number=1,Type=Float,Description=\"Maximum allele frequency of the reported benign inversion genomic regions (if available)\">\n##INFO=<ID=P_gain_phen,Number=1,Type=String,Description=\"Phenotype of the pathogenic gain genomic regions completely overlapped with the SV to annotate\">\n##INFO=<ID=P_gain_hpo,Number=1,Type=String,Description=\"HPO terms describing the pathogenic gain genomic regions completely overlapped with the SV to annotate\">\n##INFO=<ID=P_gain_source,Number=1,Type=String,Description=\"Origin of the pathogenic gain genomic regions completely overlapped with the SV to annotate: dbVarNR (dbVar), ClinVar (CLN), ClinGen (TS3)\">\n##INFO=<ID=P_gain_coord,Number=1,Type=String,Description=\"Coordinates of the pathogenic gain genomic regions completely overlapped with the SV to annotate\">\n##INFO=<ID=P_loss_phen,Number=1,Type=String,Description=\"Phenotype of the pathogenic loss genomic regions completely overlapped with the SV to annotate\">\n##INFO=<ID=P_loss_hpo,Number=1,Type=String,Description=\"HPO terms describing the pathogenic loss genomic regions completely overlapped with the SV to annotate\">\n##INFO=<ID=P_loss_source,Number=1,Type=String,Description=\"Origin of the pathogenic loss genomic regions completely overlapped with the SV to annotate: dbVarNR (dbVar), ClinVar (CLN), ClinGen (HI3), morbid\">\n##INFO=<ID=P_loss_coord,Number=1,Type=String,Description=\"Coordinates of the pathogenic loss genomic regions completely overlapped with the SV to annotate\">\n##INFO=<ID=P_ins_phen,Number=1,Type=String,Description=\"Phenotype of the pathogenic insertion genomic regions completely overlapped with the SV to annotate\">\n##INFO=<ID=P_ins_hpo,Number=1,Type=String,Description=\"HPO terms describing the pathogenic insertion genomic regions completely overlapped with the SV to annotate\">\n##INFO=<ID=P_ins_source,Number=1,Type=String,Description=\"Origin of the pathogenic insertion genomic regions completely overlapped with the SV to annotate: dbVarNR (dbVar), ClinVar (CLN)\">\n##INFO=<ID=P_ins_coord,Number=1,Type=String,Description=\"Coordinates of the pathogenic insertion genomic regions completely overlapped with the SV to annotate\">\n##INFO=<ID=P_snvindel_nb,Number=1,Type=Integer,Description=\"Number of pathogenic snv/indel from public databases completely overlapped with the SV to annotate\">\n##INFO=<ID=P_snvindel_phen,Number=1,Type=String,Description=\"Phenotypes of pathogenic snv/indel from public databases completely overlapped with the SV to annotate\">\n##INFO=<ID=TAD_coordinate,Number=1,Type=String,Description=\"Coordinates of the TAD whose boundaries overlapped with the annotated SV (boundaries included in the coordinates)\">\n##INFO=<ID=ENCODE_experiment,Number=1,Type=String,Description=\"ENCODE experiments used to define the TAD\">\n##INFO=<ID=Cosmic_ID,Number=1,Type=String,Description=\"COSMIC identifier\">\n##INFO=<ID=Cosmic_mut_typ,Number=1,Type=String,Description=\"Defined as Gain or Loss\">\n##INFO=<ID=CytoBand,Number=1,Type=String,Description=\"Cytogenic band annotation\">\n##INFO=<ID=GC_content_left,Number=1,Type=Float,Description=\"GC content around the left SV breakpoint (+/- 100bp)\">\n##INFO=<ID=GC_content_right,Number=1,Type=Float,Description=\"GC content around the right SV breakpoint (+/- 100bp)\">\n##INFO=<ID=Repeat_coord_left,Number=1,Type=String,Description=\"Repeats coordinates around the left SV breakpoint (+/- 100bp)\">\n##INFO=<ID=Repeat_type_left,Number=1,Type=String,Description=\"Repeats type around the left SV breakpoint (+/- 100bp) e.g. AluSp, L2b, L1PA2, LTR12C, SVA_D, ...\">\n##INFO=<ID=Repeat_coord_right,Number=1,Type=String,Description=\"Repeats coordinates around the right SV breakpoint (+/- 100bp)\">\n##INFO=<ID=Repeat_type_right,Number=1,Type=String,Description=\"Repeats type around the right SV breakpoint (+/- 100bp) e.g. AluSp, L2b, L1PA2, LTR12C, SVA_D, ...\">\n##INFO=<ID=Gap_left,Number=1,Type=String,Description=\"Gap regions coordinates around the left SV breakpoint (+/- 100bp)\">\n##INFO=<ID=Gap_right,Number=1,Type=String,Description=\"Gap regions coordinates around the right SV breakpoint (+/-100bp)\">\n##INFO=<ID=SegDup_left,Number=1,Type=String,Description=\"Segmental Duplication regions coordinates around the left SV breakpoint (+/- 100bp)\">\n##INFO=<ID=SegDup_right,Number=1,Type=String,Description=\"Segmental Duplication regions coordinates around the right SV breakpoint (+/- 100bp)\">\n##INFO=<ID=ENCODE_blacklist_left,Number=1,Type=String,Description=\"ENCODE blacklist regions coordinates around the left SV breakpoint (+/- 100bp)\">\n##INFO=<ID=ENCODE_blacklist_characteristics_left,Number=1,Type=String,Description=\"ENCODE blacklist regions characteristics around the left SV breakpoint (+/- 100bp)\">\n##INFO=<ID=ENCODE_blacklist_right,Number=1,Type=String,Description=\"ENCODE blacklist regions coordinates around the right SV breakpoint (+/- 100bp)\">\n##INFO=<ID=ENCODE_blacklist_characteristics_right,Number=1,Type=String,Description=\"ENCODE blacklist regions characteristics around the right SV breakpoint (+/- 100bp)\">\n##INFO=<ID=ACMG,Number=1,Type=String,Description=\"ACMG genes\">\n##INFO=<ID=HI,Number=1,Type=Integer,Description=\"ClinGen Haploinsufficiency Score\">\n##INFO=<ID=TS,Number=1,Type=Float,Description=\"ClinGen Triplosensitivity Score\">\n##INFO=<ID=DDD_HI_percent,Number=1,Type=Float,Description=\"Haploinsufficiency ranks from DDD\">\n##INFO=<ID=GenCC_disease,Number=1,Type=String,Description=\"GenCC disease name: e.g. Nizon-Isidor syndrome\">\n##INFO=<ID=GenCC_moi,Number=1,Type=String,Description=\"GenCC mode of inheritance\">\n##INFO=<ID=GenCC_classification,Number=1,Type=String,Description=\"GenCC classification (Definitive, Strong, Moderate, Limited, Disputed, Animal Model Only, Refuted or No known disease relationship)\">\n##INFO=<ID=GenCC_pmid,Number=1,Type=String,Description=\"GenCC Pubmed Id\">\n##INFO=<ID=DDD_status,Number=1,Type=String,Description=\"DDD status: e.g. confirmed, probable\">\n##INFO=<ID=DDD_mode,Number=1,Type=String,Description=\"DDD allelic requirement: e.g. biallelic, hemizygous...\">\n##INFO=<ID=DDD_consequence,Number=1,Type=String,Description=\"DDD mutation consequence: e.g. 'loss of function', uncertain ...\">\n##INFO=<ID=DDD_disease,Number=1,Type=String,Description=\"DDD disease name: e.g. 'OCULOAURICULAR SYNDROME'\">\n##INFO=<ID=DDD_pmid,Number=1,Type=String,Description=\"DDD Pubmed Id\">\n##INFO=<ID=ExAC_synZ,Number=1,Type=Float,Description=\"Positive synZ_ExAC (Z score) from ExAC indicate gene intolerance to synonymous variation\">\n##INFO=<ID=ExAC_misZ,Number=1,Type=Float,Description=\"Positive misZ_ExAC (Z score) from ExAC indicate gene intolerance to missense variation\">\n##INFO=<ID=ExAC_delZ,Number=1,Type=Float,Description=\"Positive delZ_ExAC (Z score) from ExAC indicate gene intolerance to deletion\">\n##INFO=<ID=ExAC_dupZ,Number=1,Type=Float,Description=\"Positive dupZ_ExAC (Z score) from ExAC indicate gene intolerance to duplication\">\n##INFO=<ID=ExAC_cnvZ,Number=1,Type=Float,Description=\"Positive cnvZ_ExAC (Z score) from ExAC indicate gene intolerance to CNV\">\n##INFO=<ID=OMIM_ID,Number=1,Type=String,Description=\"OMIM unique six-digit identifier\">\n##INFO=<ID=OMIM_phenotype,Number=1,Type=String,Description=\"e.g. Charcot-Marie-Tooth disease\">\n##INFO=<ID=OMIM_inheritance,Number=1,Type=String,Description=\"e.g. AD (= 'Autosomal dominant'). Detailed in AnnotSV's FAQ.\">\n##INFO=<ID=OMIM_morbid,Number=1,Type=String,Description=\"Set to 'yes' if the SV overlaps an OMIM morbid gene\">\n##INFO=<ID=OMIM_morbid_candidate,Number=1,Type=String,Description=\"Set to 'yes' if the SV overlaps an OMIM morbid gene candidate\">\n##INFO=<ID=LOEUF_bin,Number=1,Type=Integer,Description=\"Minimal 'decile bin of LOEUF' for given transcripts of a gene (lower values indicate more constrained). Values = integer [0-9]\">\n##INFO=<ID=GnomAD_pLI,Number=1,Type=Float,Description=\"Score computed by gnomAD indicating the probability that a gene is intolerant to a loss of function variation (Nonsense, splice acceptor/donor variants due to SNV/indel)\">\n##INFO=<ID=ExAC_pLI,Number=1,Type=Float,Description=\"Score computed by ExAC indicating the probability that a gene is intolerant to a loss of function variation (Nonsense, splice acceptor/donor variants due to SNV/indel). ExAC considers pLI>=0.9 as an extremely LoF intolerant gene\">\n##INFO=<ID=Exomiser_gene_pheno_score,Number=1,Type=Float,Description=\"Exomiser score for how close each overlapped gene is to the phenotype\">\n##INFO=<ID=Human_pheno_evidence,Number=1,Type=String,Description=\"Phenotypic evidence from Human model\">\n##INFO=<ID=Mouse_pheno_evidence,Number=1,Type=String,Description=\"Phenotypic evidence from Mouse model\">\n##INFO=<ID=Fish_pheno_evidence,Number=1,Type=String,Description=\"Phenotypic evidence from Fish model\">\n##INFO=<ID=Compound_htz(sample),Number=1,Type=String,Description=\"List of heterozygous SNV/indel (reported with 'chrom_position') presents in the gene overlapped by the annotated SV\">\n##INFO=<ID=Count_hom(sample),Number=1,Type=Integer,Description=\"Number of homozygous SNV/indel (extracted from VCF input file) in the individual 'sample' which are present: 1) in the deletion SV ('full' annotation) and 2) between intersectStart and intersectEnd ('split' annotation)\">\n##INFO=<ID=Count_htz(sample),Number=1,Type=Integer,Description=\"Number of heterozygous SNV/indel (extracted from VCF input file) in the individual 'sample' which are present: 1) in the SV ('full' annotation) and 2) between intersectStart and intersectEnd ('split' annotation)\">\n##INFO=<ID=Count_htz/allHom(sample),Number=1,Type=Float,Description=\"Ratio for QC filtering: #htz(sample)/#allHom(sample)\">\n##INFO=<ID=Count_htz/total(cohort),Number=1,Type=Float,Description=\"Ratio for QC filtering: #htz(sample)/#total(cohort)\">\n##INFO=<ID=Count_total(cohort),Number=1,Type=Integer,Description=\"Total count of SNV/indel called from all the samples of the cohort and present in the interval of the deletion\">\n##INFO=<ID=AnnotSV_ranking_score,Number=1,Type=Float,Description=\"SV ranking score following the 2019 joint consensus recommendation of ACMG and ClinGen. Scoring: pathogenic >= 0.99, likely pathogenic [0.90;0.98], variant of uncertain significance [0.89;-0.89], likely benign [-0.90;-0.98], benign <= -0.99.\">\n##INFO=<ID=AnnotSV_ranking_criteria,Number=1,Type=String,Description=\"Decision criteria explaining the AnnotSV ranking score\">\n##INFO=<ID=ACMG_class,Number=1,Type=String,Description=\"SV ranking class into 1 of 5: class 1 (benign), class 2 (likely benign), class 3 (variant of unknown significance), class 4 (likely pathogenic), class 5 (pathogenic)\">\n##INFO=<ID=INFO,Number=.,Type=String,Description=\"Imported from AnnotSV\">\n##INFO=<ID=Closest_left,Number=.,Type=String,Description=\"Imported from AnnotSV\">\n##INFO=<ID=Closest_right,Number=.,Type=String,Description=\"Imported from AnnotSV\">\n##INFO=<ID=Tx_version,Number=.,Type=String,Description=\"Imported from AnnotSV\">\n##INFO=<ID=po_P_gain_phen,Number=.,Type=String,Description=\"Imported from AnnotSV\">\n##INFO=<ID=po_P_gain_hpo,Number=.,Type=String,Description=\"Imported from AnnotSV\">\n##INFO=<ID=po_P_gain_source,Number=.,Type=String,Description=\"Imported from AnnotSV\">\n##INFO=<ID=po_P_gain_coord,Number=.,Type=String,Description=\"Imported from AnnotSV\">\n##INFO=<ID=po_P_gain_percent,Number=.,Type=String,Description=\"Imported from AnnotSV\">\n##INFO=<ID=po_P_loss_phen,Number=.,Type=String,Description=\"Imported from AnnotSV\">\n##INFO=<ID=po_P_loss_hpo,Number=.,Type=String,Description=\"Imported from AnnotSV\">\n##INFO=<ID=po_P_loss_source,Number=.,Type=String,Description=\"Imported from AnnotSV\">\n##INFO=<ID=po_P_loss_coord,Number=.,Type=String,Description=\"Imported from AnnotSV\">\n##INFO=<ID=po_P_loss_percent,Number=.,Type=String,Description=\"Imported from AnnotSV\">\n##INFO=<ID=po_B_gain_allG_source,Number=.,Type=String,Description=\"Imported from AnnotSV\">\n##INFO=<ID=po_B_gain_allG_coord,Number=.,Type=String,Description=\"Imported from AnnotSV\">\n##INFO=<ID=po_B_gain_someG_source,Number=.,Type=String,Description=\"Imported from AnnotSV\">\n##INFO=<ID=po_B_gain_someG_coord,Number=.,Type=String,Description=\"Imported from AnnotSV\">\n##INFO=<ID=po_B_loss_allG_source,Number=.,Type=String,Description=\"Imported from AnnotSV\">\n##INFO=<ID=po_B_loss_allG_coord,Number=.,Type=String,Description=\"Imported from AnnotSV\">\n##INFO=<ID=po_B_loss_someG_source,Number=.,Type=String,Description=\"Imported from AnnotSV\">\n##INFO=<ID=po_B_loss_someG_coord,Number=.,Type=String,Description=\"Imported from AnnotSV\">\n##INFO=<ID=NCBI_gene_ID,Number=.,Type=String,Description=\"Imported from AnnotSV\">\n##INFO=<ID=HGNC_gene_ID,Number=.,Type=String,Description=\"Imported from AnnotSV\">\n##FORMAT=<ID=GT,Number=1,Type=String,Description=\"Genotype\">\n##FORMAT=<ID=RE,Number=1,Type=Integer,Description=\"Reads Expected: the number of expected reads under the probabilistic model (Decon)\">\n##FORMAT=<ID=RO,Number=1,Type=Integer,Description=\"Reads observed: the number of observed reads (Decon)\">\n##FORMAT=<ID=RR,Number=1,Type=Float,Description=\"Reads ratio: the ratio of observed to expected reads (Decon)\">\n##FORMAT=<ID=NC,Number=1,Type=Integer,Description=\"N.comp: the number of samples used as the reference set (Decon)\">\n##FORMAT=<ID=CO,Number=1,Type=Float,Description=\"Correlation: the maximum correlation between the test sample and any other sample in the full set of BAM files (Decon)\">\n##FORMAT=<ID=BF,Number=1,Type=Float,Description=\"Bayes factor associated with the call 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    "path": "share/doc/AnnotSV/Example/test2.vcf",
    "content": "##fileformat=VCFv4.3\r\n##fileDate=23/03/2023\r\n##source=AnnotSV\r\n##FILTER=<ID=PASS,Description=\"Passed filter\">\r\n##ALT=<ID=DUP,Description=\"Duplication\">\r\n##ALT=<ID=DEL,Description=\"Deletion\">\r\n##INFO=<ID=SVLEN,Number=1,Type=Integer,Description=\"length of event\">\r\n##INFO=<ID=END,Number=1,Type=Integer,Description=\"End of event\">\r\n##INFO=<ID=CN,Number=1,Type=Integer,Description=\"Copy number\">\r\n##INFO=<ID=SVTYPE,Number=1,Type=String,Description=\"Type of structural variation\">\r\n##FORMAT=<ID=GT,Number=1,Type=String,Description=\"Genotype\">\r\n##contig=<ID=chr1,length=249250621,assembly=hg19>\r\n##contig=<ID=chr2,length=243199373,assembly=hg19>\r\n##contig=<ID=chr3,length=198022430,assembly=hg19>\r\n##contig=<ID=chr4,length=191154276,assembly=hg19>\r\n##contig=<ID=chr5,length=180915260,assembly=hg19>\r\n##contig=<ID=chr6,length=171115067,assembly=hg19>\r\n##contig=<ID=chr7,length=159138663,assembly=hg19>\r\n##contig=<ID=chr8,length=146364022,assembly=hg19>\r\n##contig=<ID=chr9,length=141213431,assembly=hg19>\r\n##contig=<ID=chr10,length=135534747,assembly=hg19>\r\n##contig=<ID=chr11,length=135006516,assembly=hg19>\r\n##contig=<ID=chr12,length=133851895,assembly=hg19>\r\n##contig=<ID=chr13,length=115169878,assembly=hg19>\r\n##contig=<ID=chr14,length=107349540,assembly=hg19>\r\n##contig=<ID=chr15,length=102531392,assembly=hg19>\r\n##contig=<ID=chr16,length=90354753,assembly=hg19>\r\n##contig=<ID=chr17,length=81195210,assembly=hg19>\r\n##contig=<ID=chr18,length=78077248,assembly=hg19>\r\n##contig=<ID=chr19,length=59128983,assembly=hg19>\r\n##contig=<ID=chr20,length=63025520,assembly=hg19>\r\n##contig=<ID=chr21,length=48129895,assembly=hg19>\r\n##contig=<ID=chr22,length=51304566,assembly=hg19>\r\n##contig=<ID=chrM,length=16571,assembly=hg19>\r\n##contig=<ID=chrX,length=155270560,assembly=hg19>\r\n##contig=<ID=chrY,length=59373566,assembly=hg19>\r\n##reference=file:hg19\r\n#CHROM\tPOS\tID\tREF\tALT\tQUAL\tFILTER\tINFO\tFORMAT\tsample1\tsample2\r\nchr1\t14110160\t.\tG\t<DUP:TANDEM>\t999\tPASS\tEND=14110400\tGT\t0/1\t0/1\r\nchr2\t110138404\t.\tT\t<DEL>\t.\t.\tEND=110222824\tGT\t0/1\t0/1\r\nchr5\t80251899\t.\tT\t<INS>\t999\tPASS\tEND=80261899\tGT\t1/1\t0/1\r\n"
  },
  {
    "path": "share/doc/AnnotSV/annotations.md",
    "content": "# Annotations databases\n\nAnnotSV requires different data sources for the annotation and the ranking of SV. In order to provide a ready to start installation of AnnotSV, each annotation source (that do not require a commercial license) is automatically downloaded during the installation.\n\nThe aim of each of these sources is fully explained in the [README](../../../README.AnnotSV_3.5.7.pdf) file.\n\nAnnotation can be performed using either the GRCh37 or GRCh38 build of the human genome (user defined). Some of the annotations are linked to the gene name and thus provided independently of the genome build.\n"
  },
  {
    "path": "share/doc/AnnotSV/quickstart.md",
    "content": "\n# Quick Installation\n\nRequirements are fully explained in the [README](../../../README.AnnotSV_3.5.7.pdf) file.\n\n1. The sources can be cloned to any directory:\n```\ncd /path/to/install/\ngit clone https://github.com/lgmgeo/AnnotSV.git\n```\n2. Then, the user can easily install the package using make:\n```\ncd /path/to/install/AnnotSV\nmake PREFIX=. install\nmake PREFIX=. install-human-annotation\nmake PREFIX=. install-mouse-annotation\n```\n\n3. Set the global environmental variable as the location of the git repo on your system. \n\nIn csh:\n```\nsetenv ANNOTSV /path/to/install/AnnotSV\n```\nIn bash:\n```\nexport ANNOTSV=/path/to/install/AnnotSV\n```\n\n# TEST\n\n1. Change to the repo directory, and run the test\n```\ncd /path/to/install/AnnotSV/share/doc/AnnotSV/Example/\n$ANNOTSV/bin/AnnotSV -SVinputFile test.bed -outputFile ./test.annotated.tsv -svtBEDcol 4\n```\n2. Examine the output\n\n<br />\n\n"
  },
  {
    "path": "share/doc/AnnotSV/ranking.md",
    "content": "# SV ranking/classification\n\nIn order to assist the clinical interpretation of SV, AnnotSV provides on top of the annotations a ranking score to assess SV pathogenicity. This score is an adaptation of the work provided by the joint consensus recommendation of ACMG and ClinGen ([Riggs et al., 2020](https://www.nature.com/articles/s41436-019-0686-8)). We especially took attention in scoring as much as possible recessive SV observed in various dataset (NGS, array based...)\n\n<br />\n\n| Score | Class type | Class|\n| :---: | :--- | :--- |\n|   0.99 or more points | Pathogenic | Class 5 |\n| 0.90 to 0.98 points   | Likely pathogenic\t| Class 4 |\n| 0.89 to −0.89 points | Variant of uncertain significance | Class 3 |\n| −0.90 to −0.98 points | Likely benign\t| Class 2 |\n| −0.99 or fewer points | Benign | Class 1 |\n\n<br />\n\n# Method\n\nThe comprehensive and detailed scoring guidelines are available in the [Scoring_Criteria_AnnotSV](../../../Scoring_Criteria_AnnotSV_v3.4.xlsx) file (see Table1 for loss SV and Table2 for gain SV).\n"
  },
  {
    "path": "share/doc/AnnotSV/webserver_overview.md",
    "content": "# Webserver overview\nThe AnnotSV webserver is separated into the annotation part (AnnotSV engine) and the analysis and visualization part:\n\n![](images/AnnotSV_overview.jpg)\n\n## Input\nMultiple input formats are supported by the AnnotSV webserver corresponding to different usages. One can query directly the server using SV coordinates (format is Chromosome:Begin-End SVType) as an easy and fast way to gather annotations and classification for a single SV. Alternatively and if one requires a larger analysis (multiple SV), a [BED](https://genome.ucsc.edu/FAQ/FAQformat.html#format1) (browser extensible data) file or a [VCF](https://samtools.github.io/hts-specs/VCFv4.3.pdf) (Variant Call Format) file can be submitted.\n<br>\nThe user can add optional sample related information such as the HPO terms to help prioritization or SNV/indels (additional VCF) to help identify false positive deletion. \n\n## Annotations\nAnnotSV compiles functionally, regulatory and clinically **relevant information** and aims at providing annotations useful to i) **interpret SV potential pathogenicity and ii) filter out SV potential false positives.**\n<br />\nThese **relevant annotations** are detailed in the [README](../../../README.AnnotSV_3.5.7.pdf).\n\n## Phenotype-driven prioritization\nTo link the patient's phenotypic data to the already available knowledge for each gene, AnnotSV provide a phenotype driven prioritization module based on the [HPO (Human Phenotype Ontology) dataset](https://pubmed.ncbi.nlm.nih.gov/30476213/).\n\n## Ranking\nIn addition, AnnotSV provides on top of the annotations **a ranking score** to assess SV pathogenicity.\nThis score is an adaptation of the work provided by [the joint consensus recommendation of ACMG and ClinGen](https://pubmed.ncbi.nlm.nih.gov/31690835/). We especially took attention in scoring as much as possible recessive SV observed in various dataset (NGS, array based...).<br />\n**The SV classification is detailed [here](ranking.md).**\n\n## Output\nThe output file contains the overlaps of the SV with relevant genomic features where the genes refer to RefSeq or ENSEMBL genes (user defined).\n\nVarious output formats are available online to visualize your AnnotSV results:\n-  a TSV (tab-separated values) file powered by the AnnotSV Annotation Engine\n-  a VCF file powered by [variantconvert](https://github.com/SamuelNicaise/variantconvert)\n-  a knot HTML file and a knot XLSM file powered by [knotAnnotSV](https://github.com/mobidic/knotAnnotSV)\n-  an HTML CIRCOS PLOT file powered by [vcf2circos](https://github.com/bioinfo-chru-strasbourg/vcf2circos)\n\n\n## Typical use\nA typical AnnotSV use would be to first look at the annotation and ranking of each SV as a whole (i.e. “full”) and then focus on the content of that SV. Indeed, **there are 2 types of lines produced by AnnotSV** (cf the “AnnotSV type” output column):\n\n- An annotation on the **“full” length** of the SV:\nEvery SV are reported, even those not covering a gene. This type of annotation gives an estimate of the SV event itself.\n\n- An annotation of the SV **“split” by gene**:\nThis type of annotation gives an opportunity to focus on each gene overlapped by the SV. Thus, when a SV spans over several genes, the output will contain as many annotations lines as covered genes (cf example in FAQ). This latter annotation is extremely powerful to shorten the identification of mutation implicated in a specific gene.\n\nThe annotations columns available in the output file are detailed in the [README](../../../README.AnnotSV_3.5.7.pdf).\n"
  },
  {
    "path": "share/tcl/AnnotSV/AnnotSV-benignsv.tcl",
    "content": "############################################################################################################\n# AnnotSV 3.5.8                                                                                            #\n#                                                                                                          #\n# AnnotSV: An integrated tool for Structural Variations annotation and ranking                             #\n#                                                                                                          #\n# Copyright (C) 2017-present Veronique Geoffroy (veronique.geoffroy@inserm.fr)                             #\n#                                                                                                          #\n# This is part of AnnotSV source code.                                                                     #\n#                                                                                                          #\n# This program is free software; you can redistribute it and/or                                            #\n# modify it under the terms of the GNU General Public License                                              #\n# as published by the Free Software Foundation; either version 3                                           #\n# of the License, or (at your option) any later version.                                                   #\n#                                                                                                          #\n# This program is distributed in the hope that it will be useful,                                          #\n# but WITHOUT ANY WARRANTY; without even the implied warranty of                                           #\n# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the                                            #\n# GNU General Public License for more details.                                                             #\n#                                                                                                          #\n# You should have received a copy of the GNU General Public License                                        #\n# along with this program; If not, see <http://www.gnu.org/licenses/>.                                     #\n############################################################################################################\n\n\n# Creation / update (if some data source files are presents) of:\n# - $benignLossFile_Sorted\n# - $benignGainFile_Sorted\n# - $benignInsFile_Sorted\n# - $benignInvFile_Sorted\nproc checkBenignFiles {} {\n    \n    global g_AnnotSV\n    \n    foreach genomeBuild {GRCh37 GRCh38 CHM13} {\n        set benignDir \"$g_AnnotSV(annotationsDir)/Annotations_$g_AnnotSV(organism)/SVincludedInFt/BenignSV/$genomeBuild\"\n        \n        # Files to create / update\n        set benignLossFile_Sorted \"$benignDir/benign_Loss_SV_$genomeBuild.sorted.bed\"\n        set benignGainFile_Sorted \"$benignDir/benign_Gain_SV_$genomeBuild.sorted.bed\"\n        set benignInsFile_Sorted \"$benignDir/benign_Ins_SV_$genomeBuild.sorted.bed\"\n        set benignInvFile_Sorted \"$benignDir/benign_Inv_SV_$genomeBuild.sorted.bed\"\n        \n        # Text to write only if an update of the sources is requested (in the check* proc).\n        set g_AnnotSV(benignText) \"\\t...creation/update of the \\\"benign_*_SV_$genomeBuild.sorted.bed\\\" files ([clock format [clock seconds] -format \"%B %d %Y - %H:%M\"])\\n\\t   (done only once)\"\n        \n        # Creation of benign*File_Tmp (not formatted and sorted)\n        set benignLossFile_Tmp \"$benignDir/benign_Loss_SV_$genomeBuild.tmp.bed\"\n        set benignGainFile_Tmp \"$benignDir/benign_Gain_SV_$genomeBuild.tmp.bed\"\n        set benignInsFile_Tmp \"$benignDir/benign_Ins_SV_$genomeBuild.tmp.bed\"\n        set benignInvFile_Tmp \"$benignDir/benign_Inv_SV_$genomeBuild.tmp.bed\"\n        file delete -force $benignLossFile_Tmp\n        file delete -force $benignGainFile_Tmp\n        file delete -force $benignInsFile_Tmp\n        file delete -force $benignInvFile_Tmp\n        checkGnomAD_benignFile $genomeBuild\n        checkDGV_benignFile $genomeBuild\n        checkDDD_benignFile $genomeBuild\n        check1000g_benignFile $genomeBuild\n        checkdbVar_benignFile $genomeBuild\n        checkClinGenHITS_benignFile $genomeBuild\n        checkClinVar_benignFile $genomeBuild\n        checkIMH_benignFile $genomeBuild\n        checkCMRI_benignFile $genomeBuild\n        checkPacBioCoLoRS_benignFile $genomeBuild\n        checkFGR_benignFile $genomeBuild\n        checkHPRC_benignFile $genomeBuild\n        catch {unset g_AnnotSV(benignText)}\n        \n        # Creation of *.tmp.formatted.bed\n        foreach SVtype {Loss Gain Ins Inv} {\n            set benignFile_Sorted \"$benignDir/benign_${SVtype}_SV_$genomeBuild.sorted.bed\"\n            set benignFile_Tmp \"$benignDir/benign_${SVtype}_SV_$genomeBuild.tmp.bed\"\n            if {[file exists $benignFile_Tmp]} {\n                # Add the SV from $benign*File_Sorted\n                if {[file exists $benignFile_Sorted]} {\n                    set id_file1 [open \"$benignFile_Sorted\" r]\n                    set id_file2 [open \"$benignFile_Tmp\" a]\n                    while { [gets $id_file1 line] >= 0 } {\n                        puts $id_file2 $line\n                    }\n                    close $id_file1\n                    close $id_file2\n                }\n                # sort\n                catch {checkBed $benignFile_Tmp $benignDir}\n                file delete -force $benignFile_Tmp\n            }\n        }\n        \n        # Creation of *.sorted.bed:\n        # Intersection with very large files can cause trouble with excessive memory usage.\n        # A presort of the bed files by chromosome and then by start position combined with the use of the -sorted option will invoke a memory-efficient algorithm.\n        foreach SVtype {Loss Gain Ins Inv} {\n            set benignFile_TmpFormatted \"$benignDir/benign_${SVtype}_SV_$genomeBuild.tmp.formatted.bed\"\n            if {![file exist $benignFile_TmpFormatted]} {continue}\n            set benignFile_Sorted \"$benignDir/benign_${SVtype}_SV_$genomeBuild.sorted.bed\"\n            set sortTmpFile \"$g_AnnotSV(outputDir)/[clock format [clock seconds] -format \"%Y%m%d-%H%M%S\"]_[pid]_sort.tmp.bash\"\n            ReplaceTextInFile \"#!/bin/bash\" $sortTmpFile\n            WriteTextInFile \"# The locale specified by the environment can affects the traditional sort order. We need to use native byte values.\" $sortTmpFile\n            WriteTextInFile \"export LC_ALL=C\" $sortTmpFile\n            WriteTextInFile \"sort -k1,1 -k2,2n $benignFile_TmpFormatted > $benignFile_Sorted\" $sortTmpFile\n            file attributes $sortTmpFile -permissions 0755\n            if {[catch {eval exec bash $sortTmpFile} Message]} {\n                puts \"-- checkBenignFiles --\"\n                puts \"sort -k1,1 -k2,2n $benignFile_TmpFormatted > $benignFile_Sorted\"\n                puts \"$Message\"\n                puts \"Exit with error\"\n                exit 2\n            }\n            file delete -force $sortTmpFile\n            file delete -force $benignFile_TmpFormatted\n        }\n        \n        # Prepare the update of the overlappedGenes files\n        foreach SVtype {\"Gain\" \"Loss\" \"Ins\" \"Inv\"} {\n            set overlappedGenes_in_benign${SVtype}File \"$benignDir/overlappedGenes_in_benign_${SVtype}_SV_$genomeBuild.tsv\"\n            file delete -force [set overlappedGenes_in_benign${SVtype}File]\n        }\n    }\n    \n    # Remove some columns from g_AnnotSV(outputColHeader) if the corresponding annotation file doesn't exist\n    foreach SVtype {\"Gain\" \"Loss\" \"Ins\" \"Inv\"} {\n        set benignFile_Sorted \"$benignDir/benign_${SVtype}_SV_$genomeBuild.sorted.bed\"\n        if {![file exists $benignFile_Sorted]} {\n            set newList {}\n            foreach e \"$g_AnnotSV(outputColHeader)\" {\n                if {[regexp \"^B_[string tolower ${SVtype}]_\" $e]} {continue}\n                lappend newList $e\n            }\n            set g_AnnotSV(outputColHeader) $newList\n        }\n    }\n    \n    return\n}\n\n\n# Remove \"overlappedGenes_$\" files if there was an update of the benign dataset.\nproc removeOverlappedGenesBenignFiles {genomeBuild} {\n    \n    global g_AnnotSV\n    \n    foreach tx {RefSeq ENSEMBL} {\n        foreach SVtype {Loss Gain Ins Inv} {\n            set benignDir \"$g_AnnotSV(annotationsDir)/Annotations_$g_AnnotSV(organism)/SVincludedInFt/BenignSV/$genomeBuild\"\n            set overlappedGenes_in_benign${SVtype}File \"$benignDir/overlappedGenes_${tx}_in_benign_${SVtype}_SV_$genomeBuild.tsv\"\n            file delete -force [set overlappedGenes_in_benign${SVtype}File]\n        }\n    }\n}\n\n# If they do not exist, creation of:\n# - overlappedGenes_$tx_in_benign_Loss_SV_$genomeBuild.tsv\n# - overlappedGenes_$tx_in_benign_Gain_SV_$genomeBuild.tsv\n# - overlappedGenes_$tx_in_benign_Ins_SV_$genomeBuild.tsv\n# - overlappedGenes_$tx_in_benign_Inv_SV_$genomeBuild.tsv\n#\n# => These files are removed for each update of the benign dataset.\nproc checkOverlappedGenesBenignFiles {} {\n    \n    global g_AnnotSV\n    \n    if {$g_AnnotSV(organism) eq \"Human\"} {\n        set genomeBuild \"$g_AnnotSV(genomeBuild)\"\n        set benignDir \"$g_AnnotSV(annotationsDir)/Annotations_$g_AnnotSV(organism)/SVincludedInFt/BenignSV/$genomeBuild\"\n        set genesDir \"$g_AnnotSV(annotationsDir)/Annotations_$g_AnnotSV(organism)/Genes/$genomeBuild\"\n        \n        foreach tx {RefSeq ENSEMBL} {\n            set GenesfileFormatted [glob -nocomplain $genesDir/genes.${tx}.sorted.bed]\n            \n            foreach SVtype {Loss Gain Ins Inv} {\n                set benignBEDfile [glob -nocomplain \"$benignDir/benign_${SVtype}_SV_$genomeBuild.sorted.bed\"]\n                \n                # Files to create\n                set overlappedGenes_in_benign${SVtype}File \"$benignDir/overlappedGenes_${tx}_in_benign_${SVtype}_SV_$genomeBuild.tsv\"\n                if {[file exists [set overlappedGenes_in_benign${SVtype}File]]} {continue}\n                \n                puts \"\\t   >>> creation of [set overlappedGenes_in_benign${SVtype}File] ([clock format [clock seconds] -format \"%B %d %Y - %H:%M\"])\"\n                \n                # Intersect\n                set tmpFile \"$g_AnnotSV(outputDir)/[clock seconds]_overlappedGenes_${tx}_in_benign_${SVtype}_SV_$genomeBuild.tmp.bed\"\n                file delete -force $tmpFile\n                if {[catch {exec $g_AnnotSV(bedtools) intersect -sorted -a $GenesfileFormatted -b $benignBEDfile -wa -wb > $tmpFile} Message]} {\n                    if {[catch {exec $g_AnnotSV(bedtools) intersect -a $GenesfileFormatted -b $benignBEDfile -wa -wb > $tmpFile} Message]} {\n                        puts \"-- checkOverlappedGenesBenignFiles, $genomeBuild, $tx, $SVtype --\"\n                        puts \"$g_AnnotSV(bedtools) intersect -sorted -a $GenesfileFormatted -b $benignBEDfile -wa -wb > $tmpFile\"\n                        puts \"$Message\"\n                        puts \"Exit with error\"\n                        exit 2\n                    }\n                }\n                \n                # Parse\n                set f [open $tmpFile]\n                while {![eof $f]} {\n                    set L [gets $f]\n                    if {$L eq \"\"} {continue}\n                    set Ls [split $L \"\\t\"]\n                    set geneName [lindex $Ls 4]\n                    set benignSVcoord [lindex $Ls end-1]\n                    lappend L_genes($benignSVcoord) \"$geneName\"\n                }\n                file delete -force $tmpFile\n                set L_toWrite {}\n                foreach coord [array names L_genes] {\n                    lappend L_toWrite \"$coord\\t[join [lsort -unique $L_genes($coord)] \";\"]\"\n                }\n                WriteTextInFile [join $L_toWrite \"\\n\"] [set overlappedGenes_in_benign${SVtype}File]\n                unset L_genes\n            }\n        }\n    }\n}\n\n\n\n\n################################################################################################\n## In all the next \"check*File\" proc, create and then complete the following file:\n##   - Benign_Gain_SV_$genomeBuild.tmp.bed\n##   - Benign_Loss_SV_$genomeBuild.tmp.bed\n##   - Benign_Ins_SV_$genomeBuild.tmp.bed\n##   - Benign_Inv_SV_$genomeBuild.tmp.bed\n################################################################################################\n\nproc checkClinVar_benignFile {genomeBuild} {\n    \n    global g_AnnotSV\n    \n    ## Check if ClinVar file has been downloaded\n    ############################################\n    set benignDir \"$g_AnnotSV(annotationsDir)/Annotations_$g_AnnotSV(organism)/SVincludedInFt/BenignSV/$genomeBuild\"\n    set ClinVarFileDownloaded [lindex [glob -nocomplain \"$benignDir/clinvar*.vcf.gz\"] end]\n    \n    if {$ClinVarFileDownloaded ne \"\"} {\n        # We have some ClinVar annotations to add in $benign*File\n        if {[info exists g_AnnotSV(benignText)]} {\n            puts $g_AnnotSV(benignText)\n            unset g_AnnotSV(benignText)\n        }\n        puts \"\\t   >>> $genomeBuild ClinVar parsing ([clock format [clock seconds] -format \"%B %d %Y - %H:%M\"])\"\n        \n        removeOverlappedGenesBenignFiles $genomeBuild\n        \n        set benignLossFile_Tmp \"$benignDir/benign_Loss_SV_$genomeBuild.tmp.bed\"\n        set benignGainFile_Tmp \"$benignDir/benign_Gain_SV_$genomeBuild.tmp.bed\"\n        set benignInsFile_Tmp \"$benignDir/benign_Ins_SV_$genomeBuild.tmp.bed\"\n        set benignInvFile_Tmp \"$benignDir/benign_Inv_SV_$genomeBuild.tmp.bed\"\n        set L_toWriteLoss {}\n        set L_toWriteGain {}\n        set L_toWriteIns {}\n        set L_toWriteInv {}\n        set f [open \"| gzip -cd $ClinVarFileDownloaded\"]\n        while {! [eof $f]} {\n            set L [gets $f]\n            set Ls [split $L \"\\t\"]\n            if {[regexp \"^#\" $L]} {continue}\n            set infos [lindex $Ls 7]\n            \n            # Selection of the benign variants to keep:\n            ###########################################\n            # Criteria:\n            # - “benign” or “benign/likely benign” clinical significance (CLNSIG)\n            # - “criteria_provided”, “_multiple_submitters” or “reviewed_by_expert_panel” SV review status (CLNREVSTAT)\n            # - “Deletion” or “Duplication” SV type (CLNVC)\n            # - ≥ $g_AnnotSV(SVminSize) bp in size (default 50)\n            if {![regexp \"ALLELEID=(\\[^;\\]+)?;.*CLNREVSTAT=(\\[^;\\]+)?;.*CLNSIG=Benign.*?CLNVC=(\\[^;\\]+)?\" $infos match ALLELEID CLNREVSTAT CLNVC]} {continue}\n            if {![regexp \"criteria_provided|_multiple_submitters|reviewed_by_expert_panel\" $CLNREVSTAT]} {continue}\n            if {[regexp \"no_assertion_criteria_provided\" $CLNREVSTAT]} {continue}\n            \n            set ref [lindex $Ls 3]\n            set alt [lindex $Ls 4]\n            set SVlength [expr {abs([string length $ref]-[string length $alt])}]\n            if {$SVlength < $g_AnnotSV(SVminSize)} {continue}\n            set chrom [lindex $Ls 0]\n            set start [lindex $Ls 1]\n            # From VCF to BED format:\n            if {$start ne 0} {set start [expr {$start-1}]}\n            set end [expr {$start+$SVlength}]\n            set coord \"${chrom}:${start}-$end\"\n            \n            if {$CLNVC eq \"Deletion\"} {\n                lappend L_toWriteLoss \"$chrom\\t$start\\t$end\\tCLN:$ALLELEID\\t$coord\\tCLN\"\n            } elseif {$CLNVC eq \"Duplication\"} {\n                lappend L_toWriteGain \"$chrom\\t$start\\t$end\\tCLN:$ALLELEID\\t$coord\\tCLN\"\n            } elseif {$CLNVC eq \"Insertion\"} {\n                lappend L_toWriteIns \"$chrom\\t$start\\t$end\\tCLN:$ALLELEID\\t$coord\\tCLN\"\n            } elseif {$CLNVC eq \"Inversion\"} {\n                lappend L_toWriteInv \"$chrom\\t$start\\t$end\\tCLN:$ALLELEID\\t$coord\\tCLN\"\n            }\n            \n        }\n        close $f\n        \n        # Writing:\n        ##########\n        puts \"\\t       ([llength $L_toWriteLoss] SV Loss + [llength $L_toWriteGain] SV Gain + [llength $L_toWriteIns] SV INS + [llength $L_toWriteInv] SV INV)\"\n        if {$L_toWriteLoss ne {}} {\n            WriteTextInFile [join $L_toWriteLoss \"\\n\"] $benignLossFile_Tmp\n        }\n        if {$L_toWriteGain ne {}} {\n            WriteTextInFile [join $L_toWriteGain \"\\n\"] $benignGainFile_Tmp\n        }\n        if {$L_toWriteIns ne {}} {\n            WriteTextInFile [join $L_toWriteIns \"\\n\"]  $benignInsFile_Tmp\n        }\n        if {$L_toWriteInv ne {}} {\n            WriteTextInFile [join $L_toWriteInv \"\\n\"]  $benignInvFile_Tmp\n        }\n        \n        # Clean:\n        ########\n        file delete -force $ClinVarFileDownloaded\n    }\n    \n    return\n}\n\n\nproc checkClinGenHITS_benignFile {genomeBuild} {\n    \n    global g_AnnotSV\n    \n    ## Check if ClinGen files have been downloaded\n    ##############################################\n    set benignDir \"$g_AnnotSV(annotationsDir)/Annotations_$g_AnnotSV(organism)/SVincludedInFt/BenignSV/$genomeBuild\"\n    set ClinGenFileDownloaded1 [glob -nocomplain \"$benignDir/ClinGen_gene_curation_list_$genomeBuild.tsv\"]\n    set ClinGenFileDownloaded2 [glob -nocomplain \"$benignDir/ClinGen_region_curation_list_$genomeBuild.tsv\"]\n    \n    \n    if {$ClinGenFileDownloaded1 ne \"\" || $ClinGenFileDownloaded2 ne \"\"} {\n        # We have some ClinGen annotations to add in $benign*File\n        if {[info exists g_AnnotSV(benignText)]} {\n            puts $g_AnnotSV(benignText)\n            unset g_AnnotSV(benignText)\n        }\n        puts \"\\t   >>> $genomeBuild ClinGen parsing ([clock format [clock seconds] -format \"%B %d %Y - %H:%M\"])\"\n    } else {return}\n    \n    removeOverlappedGenesBenignFiles $genomeBuild\n    \n    set L_files \"$ClinGenFileDownloaded1\"\n    lappend L_files \"$ClinGenFileDownloaded2\"\n    \n    set L_toWriteLoss {}\n    set L_toWriteGain {}\n    set benignLossFile_Tmp \"$benignDir/benign_Loss_SV_$genomeBuild.tmp.bed\"\n    set benignGainFile_Tmp \"$benignDir/benign_Gain_SV_$genomeBuild.tmp.bed\"\n    \n    foreach ClinGenFileDownloaded \"$L_files\" {\n        if {$ClinGenFileDownloaded ne \"\"} {\n            set f [open \"$ClinGenFileDownloaded\"]\n            while {! [eof $f]} {\n                set L [gets $f]\n                set Ls [split $L \"\\t\"]\n                # Header 1 and 2:\n                #################\n                #Gene Symbol    Gene ID cytoBand        Genomic Location        Haploinsufficiency Score        Haploinsufficiency Description  Haploinsufficiency PMID1        Haploinsufficiency PMID2        Haploinsufficiency PMID3 Triplosensitivity Score  Triplosensitivity Description   Triplosensitivity PMID1 Triplosensitivity PMID2 Triplosensitivity PMID3 Date Last Evaluated     Loss phenotype OMIM ID  Triplosensitive phenotype OMIM ID\n                \n                #ISCA ID        ISCA Region Name        cytoBand        Genomic Location        Haploinsufficiency Score        Haploinsufficiency Description  Haploinsufficiency PMID1        Haploinsufficiency PMID2        Haploinsufficiency PMID3  Triplosensitivity Score Triplosensitivity Description   Triplosensitivity PMID1 Triplosensitivity PMID2 Triplosensitivity PMID3 Date Last Evaluated     Loss phenotype OMIM ID  Triplosensitive phenotype OMIM ID\n                \n                # Selection of the benign variants to keep:\n                ###########################################\n                if {[regexp \"(^#Gene Symbol)|(^#ISCA ID)\" $L]} {\n                    set i_id 0 ;# variantaccession\n                    set i_coord [lsearch -exact $Ls \"Genomic Location\"]; if {$i_coord == -1} {puts \"$ClinGenFileDownloaded\"; puts \"Bad header line syntax. Genomic Location column not found - Exit with error\"; exit 2}\n                    set i_hi [lsearch -exact $Ls \"Haploinsufficiency Score\"]; if {$i_hi == -1} {puts \"$ClinGenFileDownloaded\"; puts \"Bad header line syntax. Haploinsufficiency Score column not found - Exit with error\"; exit 2}\n                    set i_ts [lsearch -exact $Ls \"Triplosensitivity Score\"]; if {$i_ts == -1} {puts \"$ClinGenFileDownloaded\"; puts \"Bad header line syntax. Triplosensitivity column not found - Exit with error\"; exit 2}\n                    continue\n                }\n                if {[regexp \"^#\" $L]} {continue}\n                \n                set ID [lindex $Ls $i_id]\n                set coord [lindex $Ls $i_coord]\n                regsub \"(chr)| \" $coord \"\" coord\n                if { ![regexp \"(\\[0-9XYMT\\]+):(\\[0-9\\]+)-(\\[0-9\\]+)\" $coord match chrom start end] } {continue} ;# In GRCh38, some coordinates = \"tbd\" (to be determined)\n                set hi [lindex $Ls $i_hi]\n                set ts [lindex $Ls $i_ts]\n                if {$hi eq \"40\"} {\n                    lappend L_toWriteLoss \"$chrom\\t$start\\t$end\\tHI40:$ID\\t$coord\\tHI\"\n                }\n                if {$ts eq \"40\"} {\n                    lappend L_toWriteGain \"$chrom\\t$start\\t$end\\tTS40:$ID\\t$coord\\tTS\"\n                }\n            }\n            close $f\n        }\n    }\n    \n    # Writing:\n    ##########\n    puts \"\\t       ([llength $L_toWriteLoss] SV Loss + [llength $L_toWriteGain] SV Gain)\"\n    if {$L_toWriteLoss ne {}} {\n        WriteTextInFile [join $L_toWriteLoss \"\\n\"] $benignLossFile_Tmp\n    }\n    if {$L_toWriteGain ne {}} {\n        WriteTextInFile [join $L_toWriteGain \"\\n\"] $benignGainFile_Tmp\n    }\n    \n    # Clean:\n    ########\n    file delete -force $ClinGenFileDownloaded1\n    file delete -force $ClinGenFileDownloaded2\n    \n    return\n}\n\n\n\n\nproc checkDGV_benignFile {genomeBuild} {\n    \n    global g_AnnotSV\n    \n    ## Check if DGV files have been downloaded\n    ##########################################\n    set benignDir \"$g_AnnotSV(annotationsDir)/Annotations_$g_AnnotSV(organism)/SVincludedInFt/BenignSV/$genomeBuild\"\n    set DGVfileDownloaded [glob -nocomplain \"$benignDir/GRCh3*_hg*_variants_*.txt\"]\n    \n    if {$DGVfileDownloaded ne \"\"} {\n        # We have some DGV annotations to add in $benign*File\n        if {[info exists g_AnnotSV(benignText)]} {\n            puts $g_AnnotSV(benignText)\n            unset g_AnnotSV(benignText)\n        }\n        puts \"\\t   >>> $genomeBuild DGV parsing ([clock format [clock seconds] -format \"%B %d %Y - %H:%M\"])\"\n        \n        removeOverlappedGenesBenignFiles $genomeBuild\n        \n        set benignLossFile_Tmp \"$benignDir/benign_Loss_SV_$genomeBuild.tmp.bed\"\n        set benignGainFile_Tmp \"$benignDir/benign_Gain_SV_$genomeBuild.tmp.bed\"\n        set benignInsFile_Tmp \"$benignDir/benign_Ins_SV_$genomeBuild.tmp.bed\"\n        set benignInvFile_Tmp \"$benignDir/benign_Inv_SV_$genomeBuild.tmp.bed\"\n        set L_toWriteLoss {}\n        set L_toWriteGain {}\n        set L_toWriteIns {}\n        set L_toWriteInv {}\n        \n        set f [open \"$DGVfileDownloaded\"]\n        foreach L [LinesFromFile $DGVfileDownloaded] {\n            set Ls [split $L \"\\t\"]\n            \n            # Header:\n            #########\n            # variantaccession   chr   start   end   varianttype   variantsubtype   reference   pubmedid   method   platform   mergedvariants   supportingvariants   mergedorsample   frequency   samplesize   observedgains   observedlosses   cohortdescription   genes   samples\n            # WARNING: the \"frequency\" field is empty\n            if {[regexp \"^variantaccession\" $L]} {\n                set i_id 0 ;# variantaccession\n                set i_chr [lsearch -exact $Ls \"chr\"];     if {$i_chr == -1} {puts \"$DGVfileDownloaded\"; puts \"Bad header line syntax. chr column not found - Exit with error\"; exit 2}\n                set i_start [lsearch -exact $Ls \"start\"]; if {$i_start == -1} {puts \"$DGVfileDownloaded\"; puts \"Bad header line syntax. start column not found - Exit with error\"; exit 2}\n                set i_end [lsearch -exact $Ls \"end\"];     if {$i_end == -1} {puts \"$DGVfileDownloaded\"; puts \"Bad header line syntax. end column not found - Exit with error\"; exit 2}\n                set i_samplesize [lsearch -exact $Ls \"samplesize\"];  if {$i_samplesize == -1} {puts \"$DGVfileDownloaded\"; puts \"Bad header line syntax. samplesize column not found - Exit with error\"; exit 2}\n                set i_obsgains [lsearch -exact $Ls \"observedgains\"]; if {$i_obsgains == -1} {puts \"$DGVfileDownloaded\"; puts \"Bad header line syntax. observedgains column not found - Exit with error\"; exit 2}\n                set i_obsloss [lsearch -exact $Ls \"observedlosses\"]; if {$i_obsloss == -1} {puts \"$DGVfileDownloaded\"; puts \"Bad header line syntax. observedlosses column not found - Exit with error\"; exit 2}\n                continue\n            }\n            \n            # Selection of the benign variants to keep:\n            ###########################################\n            # ≥ 500 individuals tested\n            set samplesize [lindex $Ls $i_samplesize]\n            if {$samplesize <= $g_AnnotSV(minTotalNumber)} {continue}\n            # allele frequency > 0.1%\n            set obsgains [lindex $Ls $i_obsgains]\n            set obsloss [lindex $Ls $i_obsloss]\n            set freqgain [expr {$obsgains*100/(2*$samplesize)}]\n            set freqloss [expr {$obsloss*100/(2*$samplesize)}]\n            set id [lindex $Ls $i_id]\n            set chr [lindex $Ls $i_chr]\n            set start [lindex $Ls $i_start]\n            set end [lindex $Ls $i_end]\n            set coord \"${chr}:${start}-$end\"\n            if {$freqgain > 0.1} {\n                set infos \"$chr\\t$start\\t$end\\t$id\\t$coord\\t[format \"%.4f\" [expr {$freqgain*1.0/100}]]\"\n                lappend L_toWriteGain \"$infos\"\n            }\n            if {$freqloss > 0.1} {\n                set infos \"$chr\\t$start\\t$end\\t$id\\t$coord\\t[format \"%.4f\" [expr {$freqloss*1.0/100}]]\"\n                lappend L_toWriteLoss \"$infos\"\n            }\n        }\n        \n        # Writing:\n        ##########\n        puts \"\\t       ([llength $L_toWriteLoss] SV Loss + [llength $L_toWriteGain] SV Gain + [llength $L_toWriteIns] SV INS + [llength $L_toWriteInv] SV INV)\"\n        if {$L_toWriteLoss ne {}} {\n            WriteTextInFile [join $L_toWriteLoss \"\\n\"] $benignLossFile_Tmp\n        }\n        if {$L_toWriteGain ne {}} {\n            WriteTextInFile [join $L_toWriteGain \"\\n\"] $benignGainFile_Tmp\n        }\n        if {$L_toWriteIns ne {}} {\n            WriteTextInFile [join $L_toWriteIns \"\\n\"]  $benignInsFile_Tmp\n        }\n        if {$L_toWriteInv ne {}} {\n            WriteTextInFile [join $L_toWriteInv \"\\n\"]  $benignInvFile_Tmp\n        }\n        \n        # Clean:\n        ########\n        file delete -force $DGVfileDownloaded\n        \n    }\n    \n    return\n}\n\n\n\nproc checkGnomAD_benignFile {genomeBuild} {\n    \n    global g_AnnotSV\n    \n    # Timing: 15 min for GRCh38\n    \n    if {$genomeBuild eq \"GRCh37\"} {\n        ## Check if GRCh37 gnomAD SV file (v2.1) has been downloaded\n        ############################################################\n        set benignDir \"$g_AnnotSV(annotationsDir)/Annotations_$g_AnnotSV(organism)/SVincludedInFt/BenignSV/GRCh37\"\n        set gnomADfileDownloaded [glob -nocomplain \"$benignDir/gnomad_v2.1_sv.sites.bed.gz\"]\n        \n        if {$gnomADfileDownloaded ne \"\"} {\n            # We have some GRCh37 gnomAD annotations to add in $benign*File\n            if {[info exists g_AnnotSV(benignText)]} {\n                puts $g_AnnotSV(benignText)\n                unset g_AnnotSV(benignText)\n            }\n            puts \"\\t   >>> GRCh37 gnomAD parsing ([clock format [clock seconds] -format \"%B %d %Y - %H:%M\"])\"\n            \n            removeOverlappedGenesBenignFiles $genomeBuild\n            \n            set benignLossFile_Tmp \"$benignDir/benign_Loss_SV_GRCh37.tmp.bed\"\n            set benignGainFile_Tmp \"$benignDir/benign_Gain_SV_GRCh37.tmp.bed\"\n            set benignInsFile_Tmp \"$benignDir/benign_Ins_SV_GRCh37.tmp.bed\"\n            set benignInvFile_Tmp \"$benignDir/benign_Inv_SV_GRCh37.tmp.bed\"\n            set L_toWriteLoss {}\n            set L_toWriteGain {}\n            set L_toWriteIns {}\n            set L_toWriteInv {}\n            \n            set f [open \"| gzip -cd $gnomADfileDownloaded\"]\n            while {![eof $f]} {\n                set L [gets $f]\n                if {$L eq \"\"} {continue}\n                set Ls [split $L \"\\t\"]\n                \n                # Header:\n                #########\n                #chrom  start   end     name    svtype  ALGORITHMS      BOTHSIDES_SUPPORT       CHR2    CPX_INTERVALS   CPX_TYPE        END2    END     EVIDENCE        HIGH_SR_BACKGROUND      PCRPLUS_DEPLETED        PESR_GT_OVERDISPERSION    POS2    PROTEIN_CODING__COPY_GAIN       PROTEIN_CODING__DUP_LOF PROTEIN_CODING__DUP_PARTIAL     PROTEIN_CODING__INTERGENIC      PROTEIN_CODING__INTRONIC        PROTEIN_CODING__INV_SPAN        PROTEIN_CODING__LOF       PROTEIN_CODING__MSV_EXON_OVR    PROTEIN_CODING__NEAREST_TSS     PROTEIN_CODING__PROMOTER        PROTEIN_CODING__UTR     SOURCE  STRANDS SVLEN   SVTYPE  UNRESOLVED_TYPE UNSTABLE_AF_PCRPLUS     VARIABLE_ACROSS_BATCHES   AN      AC      AF      N_BI_GENOS      N_HOMREF        N_HET   N_HOMALT        FREQ_HOMREF     FREQ_HET        FREQ_HOMALT     MALE_AN MALE_AC MALE_AF MALE_N_BI_GENOS MALE_N_HOMREF   MALE_N_HET      MALE_N_HOMALT     MALE_FREQ_HOMREF        MALE_FREQ_HET   MALE_FREQ_HOMALT        MALE_N_HEMIREF  MALE_N_HEMIALT  MALE_FREQ_HEMIREF       MALE_FREQ_HEMIALT       PAR     FEMALE_AN       FEMALE_AC       FEMALE_AF       FEMALE_N_BI_GENOS FEMALE_N_HOMREF FEMALE_N_HET    FEMALE_N_HOMALT FEMALE_FREQ_HOMREF      FEMALE_FREQ_HET FEMALE_FREQ_HOMALT      POPMAX_AF       AFR_AN  AFR_AC  AFR_AF  AFR_N_BI_GENOS  AFR_N_HOMREF    AFR_N_HET       AFR_N_HOMALT      AFR_FREQ_HOMREF AFR_FREQ_HET    AFR_FREQ_HOMALT AFR_MALE_AN     AFR_MALE_AC     AFR_MALE_AF     AFR_MALE_N_BI_GENOS     AFR_MALE_N_HOMREF       AFR_MALE_N_HET  AFR_MALE_N_HOMALT       AFR_MALE_FREQ_HOMREF    AFR_MALE_FREQ_HET AFR_MALE_FREQ_HOMALT    AFR_MALE_N_HEMIREF      AFR_MALE_N_HEMIALT      AFR_MALE_FREQ_HEMIREF   AFR_MALE_FREQ_HEMIALT   AFR_FEMALE_AN   AFR_FEMALE_AC   AFR_FEMALE_AF   AFR_FEMALE_N_BI_GENOS   AFR_FEMALE_N_HOMREF       AFR_FEMALE_N_HET        AFR_FEMALE_N_HOMALT     AFR_FEMALE_FREQ_HOMREF  AFR_FEMALE_FREQ_HET     AFR_FEMALE_FREQ_HOMALT  AMR_AN  AMR_AC  AMR_AF  AMR_N_BI_GENOS  AMR_N_HOMREF    AMR_N_HET       AMR_N_HOMALT      AMR_FREQ_HOMREF AMR_FREQ_HET    AMR_FREQ_HOMALT AMR_MALE_AN     AMR_MALE_AC     AMR_MALE_AF     AMR_MALE_N_BI_GENOS     AMR_MALE_N_HOMREF       AMR_MALE_N_HET  AMR_MALE_N_HOMALT       AMR_MALE_FREQ_HOMREF    AMR_MALE_FREQ_HET AMR_MALE_FREQ_HOMALT    AMR_MALE_N_HEMIREF      AMR_MALE_N_HEMIALT      AMR_MALE_FREQ_HEMIREF   AMR_MALE_FREQ_HEMIALT   AMR_FEMALE_AN   AMR_FEMALE_AC   AMR_FEMALE_AF   AMR_FEMALE_N_BI_GENOS   AMR_FEMALE_N_HOMREF       AMR_FEMALE_N_HET        AMR_FEMALE_N_HOMALT     AMR_FEMALE_FREQ_HOMREF  AMR_FEMALE_FREQ_HET     AMR_FEMALE_FREQ_HOMALT  EAS_AN  EAS_AC  EAS_AF  EAS_N_BI_GENOS  EAS_N_HOMREF    EAS_N_HET       EAS_N_HOMALT      EAS_FREQ_HOMREF EAS_FREQ_HET    EAS_FREQ_HOMALT EAS_MALE_AN     EAS_MALE_AC     EAS_MALE_AF     EAS_MALE_N_BI_GENOS     EAS_MALE_N_HOMREF       EAS_MALE_N_HET  EAS_MALE_N_HOMALT       EAS_MALE_FREQ_HOMREF    EAS_MALE_FREQ_HET EAS_MALE_FREQ_HOMALT    EAS_MALE_N_HEMIREF      EAS_MALE_N_HEMIALT      EAS_MALE_FREQ_HEMIREF   EAS_MALE_FREQ_HEMIALT   EAS_FEMALE_AN   EAS_FEMALE_AC   EAS_FEMALE_AF   EAS_FEMALE_N_BI_GENOS   EAS_FEMALE_N_HOMREF       EAS_FEMALE_N_HET        EAS_FEMALE_N_HOMALT     EAS_FEMALE_FREQ_HOMREF  EAS_FEMALE_FREQ_HET     EAS_FEMALE_FREQ_HOMALT  EUR_AN  EUR_AC  EUR_AF  EUR_N_BI_GENOS  EUR_N_HOMREF    EUR_N_HET       EUR_N_HOMALT      EUR_FREQ_HOMREF EUR_FREQ_HET    EUR_FREQ_HOMALT EUR_MALE_AN     EUR_MALE_AC     EUR_MALE_AF     EUR_MALE_N_BI_GENOS     EUR_MALE_N_HOMREF       EUR_MALE_N_HET  EUR_MALE_N_HOMALT       EUR_MALE_FREQ_HOMREF    EUR_MALE_FREQ_HET EUR_MALE_FREQ_HOMALT    EUR_MALE_N_HEMIREF      EUR_MALE_N_HEMIALT      EUR_MALE_FREQ_HEMIREF   EUR_MALE_FREQ_HEMIALT   EUR_FEMALE_AN   EUR_FEMALE_AC   EUR_FEMALE_AF   EUR_FEMALE_N_BI_GENOS   EUR_FEMALE_N_HOMREF       EUR_FEMALE_N_HET        EUR_FEMALE_N_HOMALT     EUR_FEMALE_FREQ_HOMREF  EUR_FEMALE_FREQ_HET     EUR_FEMALE_FREQ_HOMALT  OTH_AN  OTH_AC  OTH_AF  OTH_N_BI_GENOS  OTH_N_HOMREF    OTH_N_HET       OTH_N_HOMALT      OTH_FREQ_HOMREF OTH_FREQ_HET    OTH_FREQ_HOMALT OTH_MALE_AN     OTH_MALE_AC     OTH_MALE_AF     OTH_MALE_N_BI_GENOS     OTH_MALE_N_HOMREF       OTH_MALE_N_HET  OTH_MALE_N_HOMALT       OTH_MALE_FREQ_HOMREF    OTH_MALE_FREQ_HET OTH_MALE_FREQ_HOMALT    OTH_MALE_N_HEMIREF      OTH_MALE_N_HEMIALT      OTH_MALE_FREQ_HEMIREF   OTH_MALE_FREQ_HEMIALT   OTH_FEMALE_AN   OTH_FEMALE_AC   OTH_FEMALE_AF   OTH_FEMALE_N_BI_GENOS   OTH_FEMALE_N_HOMREF       OTH_FEMALE_N_HET        OTH_FEMALE_N_HOMALT     OTH_FEMALE_FREQ_HOMREF  OTH_FEMALE_FREQ_HET     OTH_FEMALE_FREQ_HOMALT  FILTER\n                if {[regexp \"^#chrom\" $L]} {\n                    set i_chrom      [lsearch -exact $Ls \"#chrom\"];       if {$i_chrom == -1} {puts \"Bad header line syntax. #CHROM column not found - Exit with error\"; exit 2}\n                    set i_start      [lsearch -exact $Ls \"start\"];        if {$i_start == -1} {puts \"Bad header line syntax. START column not found - Exit with error\"; exit 2}\n                    set i_end        [lsearch -exact $Ls \"end\"];          if {$i_end == -1} {puts \"Bad header line syntax. END column not found - Exit with error\"; exit 2}\n                    set i_svid       [lsearch -exact $Ls \"name\"];         if {$i_svid == -1} {puts \"Bad header line syntax. NAME column not found - Exit with error\"; exit 2}\n                    set i_svtype     [lsearch -exact $Ls \"svtype\"];       if {$i_svtype == -1} {puts \"Bad header line syntax. SVTYPE column not found - Exit with error\"; exit 2}\n                    set i_nhomalt    [lsearch -exact $Ls \"N_HOMALT\"];     if {$i_nhomalt == -1} {puts \"Bad header line syntax. N_HOMALT column not found - Exit with error\"; exit 2}\n                    set i_popmaxaf   [lsearch -exact $Ls \"POPMAX_AF\"];    if {$i_popmaxaf == -1} {puts \"Bad header line syntax. POPMAX_AF column not found - Exit with error\"; exit 2}\n                    set i_filter     [lsearch -exact $Ls \"FILTER\"];       if {$i_filter == -1} {puts \"Bad header line syntax. FILTER column not found - Exit with error\"; exit 2}\n                    continue\n                }\n                \n                # Selection of the benign variants to keep:\n                ###########################################\n                set FILTER [lindex $Ls $i_filter]\n                if {$FILTER != \"PASS\"} {continue}\n                \n                set SVTYPE [lindex $Ls $i_svtype]\n                regsub \":.+\" $SVTYPE \"\" SVTYPE\n                # WARNING:\n                # - MCNV have multiple coma-separated-values for nhet, nhomalt, af and popmaxaf...\n                # - \"gnomad_v2_sv.sites.bed\"      => 445858 lines of which only 1148 are MCNV\n                #   \"gnomad_v2.1_sv.sites.bed.gz\" => 387478 lines of which only 1108 are MCNV (<=> \"CN=0\")\n                # => These SV are not selected.\n                if {[lsearch -exact {DEL DUP INS INV} \"$SVTYPE\"] eq -1} {continue}\n                \n                # At least one population allele frequency > 0.1% AND at least 5 homozygous individuals\n                set nhomalt    [lindex $Ls $i_nhomalt]\n                set popmaxaf   [lindex $Ls $i_popmaxaf]\n                if {$popmaxaf < 0.001 || $nhomalt < 5} {continue}\n                \n                set chrom      [lindex $Ls $i_chrom]\n                set start      [lindex $Ls $i_start]\n                set end        [lindex $Ls $i_end]\n                set svid       [lindex $Ls $i_svid]\n                set coord \"$chrom:${start}-$end\"\n                set infos \"$chrom\\t$start\\t$end\\t$svid\\t$coord\\t[format \"%.4f\" $popmaxaf]\"\n                \n                if {$SVTYPE eq \"DEL\"} {\n                    lappend L_toWriteLoss \"$infos\"\n                }\n                if {$SVTYPE eq \"DUP\"} {\n                    lappend L_toWriteGain \"$infos\"\n                }\n                if {$SVTYPE eq \"INS\"} {\n                    lappend L_toWriteIns \"$infos\"\n                }\n                if {$SVTYPE eq \"INV\"} {\n                    lappend L_toWriteInv \"$infos\"\n                }\n            }\n            close $f\n            \n            # Writing:\n            ##########\n            puts \"\\t       ([llength $L_toWriteLoss] SV Loss + [llength $L_toWriteGain] SV Gain + [llength $L_toWriteIns] SV INS + [llength $L_toWriteInv] SV INV)\"\n            if {$L_toWriteLoss ne {}} {\n                WriteTextInFile [join $L_toWriteLoss \"\\n\"] $benignLossFile_Tmp\n            }\n            if {$L_toWriteGain ne {}} {\n                WriteTextInFile [join $L_toWriteGain \"\\n\"] $benignGainFile_Tmp\n            }\n            if {$L_toWriteIns ne {}} {\n                WriteTextInFile [join $L_toWriteIns \"\\n\"]  $benignInsFile_Tmp\n            }\n            if {$L_toWriteInv ne {}} {\n                WriteTextInFile [join $L_toWriteInv \"\\n\"]  $benignInvFile_Tmp\n            }\n            # Clean\n            file delete -force $gnomADfileDownloaded\n        }\n        \n    } elseif {$genomeBuild eq \"GRCh38\"} {\n        \n        ## Check if GRCh38 gnomAD SV files (v4.0) have been downloaded\n        ##############################################################\n        set benignDir \"$g_AnnotSV(annotationsDir)/Annotations_$g_AnnotSV(organism)/SVincludedInFt/BenignSV/GRCh38\"\n        set gnomADfilesDownloaded [glob -nocomplain \"$benignDir/gnomad.v4.0.sv.chr*.vcf.gz\"]\n        \n        if {$gnomADfilesDownloaded ne \"\"} {\n            # We have some GRCh38 gnomAD annotations to add in $benign*File\n            if {[info exists g_AnnotSV(benignText)]} {\n                puts $g_AnnotSV(benignText)\n                unset g_AnnotSV(benignText)\n            }\n            puts \"\\t   >>> GRCh38 gnomAD parsing ([clock format [clock seconds] -format \"%B %d %Y - %H:%M\"])\"\n            \n            removeOverlappedGenesBenignFiles $genomeBuild\n            \n            set benignLossFile_Tmp \"$benignDir/benign_Loss_SV_GRCh38.tmp.bed\"\n            set benignGainFile_Tmp \"$benignDir/benign_Gain_SV_GRCh38.tmp.bed\"\n            set benignInsFile_Tmp \"$benignDir/benign_Ins_SV_GRCh38.tmp.bed\"\n            set benignInvFile_Tmp \"$benignDir/benign_Inv_SV_GRCh38.tmp.bed\"\n            set L_toWriteLoss {}\n            set L_toWriteGain {}\n            set L_toWriteIns {}\n            set L_toWriteInv {}\n            \n            foreach gnomADfileDownloaded $gnomADfilesDownloaded {\n                puts \"\\t       [file tail $gnomADfileDownloaded] ([clock format [clock seconds] -format \"%B %d %Y - %H:%M\"])\"\n                # VCFs do not contain multiallelic sites (no need to split into multiple rows)\n                set f [open \"| gzip -cd $gnomADfileDownloaded\"]\n                while {![eof $f]} {\n                    set L [gets $f]\n                    if {[string index $L 0] eq \"#\" || $L eq \"\"} {continue}\n                    set Ls [split $L \"\\t\"]\n                    \n                    set FILTER [lindex $Ls 6]\n                    if {$FILTER != \"PASS\"} {continue}\n                    \n                    set chrom [lindex $Ls 0]\n                    set pos [lindex $Ls 1]\n                    # From VCF to BED:\n                    if {$pos ne 0} {set pos [expr {$pos-1}]}\n                    \n                    set svid [lindex $Ls 2]\n                    set ref [lindex $Ls 3]\n                    set alt [lindex $Ls 4]\n                    \n                    set L_infos [split [lindex $Ls 7] \";\"]\n                    \n                    # WARNING: for the following search (succession of \"lsearch\" commands), keep the same order than the feature in the VCF lines:\n                    # \"END SVTYPE controls_and_biobanks_AN controls_and_biobanks_AF controls_and_biobanks_N_HOMALT\"\n                    set k [lsearch -regexp $L_infos \"^END=\"]\n                    if {$k eq -1} {continue}\n                    set END [lindex [split [lindex $L_infos $k] \"=\"] 1]\n                    \n                    set k [lsearch -start $k -regexp $L_infos \"^SVTYPE=\"]\n                    if {$k eq -1} {continue}\n                    set SVTYPE [lindex [split [lindex $L_infos $k] \"=\"] 1]\n                    # Skip SVTYPE=\"BND||CPX||CTX\"\n                    if {$SVTYPE eq \"BND\" || $SVTYPE eq \"CPX\" || $SVTYPE eq \"CTX\"} {continue}\n                    \n                    set k [lsearch -start $k -regexp $L_infos \"^controls_and_biobanks_AN=\"]\n                    if {$k eq -1} {continue}\n                    set GD_AN [lindex [split [lindex $L_infos $k] \"=\"] 1]\n                    # Skip SV with controls_and_biobanks_AN < 1000\n                    if {$GD_AN < 1000} {continue}\n                    \n                    set k [lsearch -start $k -regexp $L_infos \"^controls_and_biobanks_AF=\"]\n                    if {$k eq -1} {continue}\n                    set GD_AF [lindex [split [lindex $L_infos $k] \"=\"] 1]\n                    # Skip SV with controls_and_biobanks_AF < 0.1% (minimum for the \"-benignAF\" option)\n                    if {$GD_AF < 0.001} {continue}\n                    \n                    set k [lsearch -start $k -regexp $L_infos \"^controls_and_biobanks_N_HOMALT=\"]\n                    if {$k eq -1} {continue}\n                    set GD_N_HOMALT [lindex [split [lindex $L_infos $k] \"=\"] 1]\n                    # Skip SV with \"controls_and_biobanks_N_HOMALT < 5\"\n                    if {$GD_N_HOMALT < 5} {continue}\n                    \n                    set coord \"$chrom:${pos}-$END\"\n                    set infos \"$chrom\\t$pos\\t$END\\t$svid\\t$coord\\t[format \"%.4f\" $GD_AF]\"\n                    \n                    if {[regexp \"DEL\" $SVTYPE]} {\n                        lappend L_toWriteLoss \"$infos\"\n                    }\n                    if {[regexp \"DUP\" $SVTYPE]} {\n                        lappend L_toWriteGain \"$infos\"\n                    }\n                    if {[regexp \"INS\" $SVTYPE]} {\n                        lappend L_toWriteIns \"$infos\"\n                    }\n                    if {$SVTYPE eq \"INV\"} {\n                        lappend L_toWriteInv \"$infos\"\n                    }\n                    # if {$END eq $pos} {puts \"WARNING: SVTYPE=$SVTYPE -- END=$END eq POS=$pos $svid\"}\n                    # if {$END < $pos}  {puts \"WARNING: SVTYPE=$SVTYPE -- END=$END < POS=$pos $svid\"}\n                    \n                }\n                \n                close $f\n            }\n            \n            # Writing:\n            ##########\n            puts \"\\t       ([llength $L_toWriteLoss] SV Loss + [llength $L_toWriteGain] SV Gain + [llength $L_toWriteIns] SV INS + [llength $L_toWriteInv] SV INV)\"\n            if {$L_toWriteLoss ne {}} {\n                WriteTextInFile [join $L_toWriteLoss \"\\n\"] $benignLossFile_Tmp\n            }\n            if {$L_toWriteGain ne {}} {\n                WriteTextInFile [join $L_toWriteGain \"\\n\"] $benignGainFile_Tmp\n            }\n            if {$L_toWriteIns ne {}} {\n                WriteTextInFile [join $L_toWriteIns \"\\n\"]  $benignInsFile_Tmp\n            }\n            if {$L_toWriteInv ne {}} {\n                WriteTextInFile [join $L_toWriteInv \"\\n\"]  $benignInvFile_Tmp\n            }\n            \n            # Clean\n            #######\n            foreach gnomADfileDownloaded $gnomADfilesDownloaded {\n                file delete -force $gnomADfileDownloaded\n            }\n        }\n    }\n    \n    return\n}\n\nproc checkHPRC_benignFile {genomeBuild} {\n    \n    global g_AnnotSV\n    \n    if {$genomeBuild eq \"GRCh38\"} {\n        ## Check if the GRCh38 PACBIO_HPRC SV file has been downloaded\n        #############################################################\n        set benignDir \"$g_AnnotSV(annotationsDir)/Annotations_$g_AnnotSV(organism)/SVincludedInFt/BenignSV/GRCh38\"\n        set HPRCfileDownloaded \"$benignDir/hprc.GRCh38.pbsv.vcf.gz\"\n        \n        if {[file exist $HPRCfileDownloaded]} {\n            # We have some GRCh38 PACBIO HPRC annotations to add in $benign*File\n            # Contains BND, DEL, DUP, INS and INV\n            # FILTER = NearContigEnd, NearReferenceGap, NearReferenceGap;NearContigEnd or PASS\n            \n            if {[info exists g_AnnotSV(benignText)]} {\n                puts $g_AnnotSV(benignText)\n                unset g_AnnotSV(benignText)\n            }\n            puts \"\\t   >>> GRCh38 PACBIO HPRC parsing ([clock format [clock seconds] -format \"%B %d %Y - %H:%M\"])\"\n            \n            removeOverlappedGenesBenignFiles $genomeBuild\n            \n            set benignLossFile_Tmp \"$benignDir/benign_Loss_SV_GRCh38.tmp.bed\"\n            set benignGainFile_Tmp \"$benignDir/benign_Gain_SV_GRCh38.tmp.bed\"\n            set benignInsFile_Tmp \"$benignDir/benign_Ins_SV_GRCh38.tmp.bed\"\n            set benignInvFile_Tmp \"$benignDir/benign_Inv_SV_GRCh38.tmp.bed\"\n            set L_toWriteLoss {}\n            set L_toWriteGain {}\n            set L_toWriteIns {}\n            set L_toWriteInv {}\n            \n            # VCFs do not contain multiallelic sites (no need to split into multiple rows)\n            set f [open \"| gzip -cd $HPRCfileDownloaded\"]\n            while {![eof $f]} {\n                set L [gets $f]\n                if {[string index $L 0] eq \"#\" || $L eq \"\"} {continue}\n                set Ls [split $L \"\\t\"]\n                \n                set FILTER [lindex $Ls 6]\n                if {$FILTER != \"PASS\"} {continue}\n                \n                set chrom [lindex $Ls 0]\n                set pos [lindex $Ls 1]\n                # From VCF to BED:\n                if {$pos ne 0} {set pos [expr {$pos-1}]}\n                \n                set svid [lindex $Ls 2]\n                \n                catch {unset END}\n                catch {unset SVTYPE}\n                catch {unset AF}\n                set L_infos [split [lindex $Ls 7] \";\"]\n                foreach inf $L_infos {\n                    set inf [split $inf \"=\"]\n                    set val [lindex $inf 0]\n                    set $val [lindex $inf 1]\n                }\n                if {![info exist END] || ![info exist SVTYPE] || ![info exist AF]} {continue}\n                # Skip SVTYPE=\"BND\"\n                if {$SVTYPE eq \"BND\"} {continue}\n                # Skip SV with AF < 5% (identified in < 6 individuals)\n                if {$AF < 0.05} {continue}\n                \n                \n                set coord \"$chrom:${pos}-$END\"\n                set infos \"$chrom\\t$pos\\t$END\\tHPRC:$svid\\t$coord\\t[format \"%.4f\" $AF]\"\n                \n                if {[regexp \"DUP\" $SVTYPE]} {\n                    lappend L_toWriteGain \"$infos\"\n                }\n                if {[regexp \"DEL\" $SVTYPE]} {\n                    lappend L_toWriteLoss \"$infos\"\n                }\n                if {[regexp \"INS\" $SVTYPE]} {\n                    lappend L_toWriteIns \"$infos\"\n                }\n                if {$SVTYPE eq \"INV\"} {\n                    lappend L_toWriteInv \"$infos\"\n                }\n                #if {$END eq $pos} {puts \"WARNING: SVTYPE=$SVTYPE -- END=$END eq POS=$pos $svid\"}\n                #if {$END < $pos}  {puts \"WARNING: SVTYPE=$SVTYPE -- END=$END < POS=$pos $svid\"}\n                \n            }\n            \n            close $f\n            \n            # Writing:\n            ##########\n            puts \"\\t       ([llength $L_toWriteLoss] SV Loss + [llength $L_toWriteGain] SV Gain + [llength $L_toWriteIns] SV INS + [llength $L_toWriteInv] SV INV)\"\n            if {$L_toWriteGain ne {}} {\n                WriteTextInFile [join $L_toWriteGain \"\\n\"] $benignGainFile_Tmp\n            }\n            if {$L_toWriteLoss ne {}} {\n                WriteTextInFile [join $L_toWriteLoss \"\\n\"] $benignLossFile_Tmp\n            }\n            if {$L_toWriteIns ne {}} {\n                WriteTextInFile [join $L_toWriteIns \"\\n\"]  $benignInsFile_Tmp\n            }\n            if {$L_toWriteInv ne {}} {\n                WriteTextInFile [join $L_toWriteInv \"\\n\"]  $benignInvFile_Tmp\n            }\n            \n            # Clean\n            #######\n            file delete -force $HPRCfileDownloaded\n        }\n        \n    }\n    \n    return\n}\n\n\n\nproc checkDDD_benignFile {genomeBuild} {\n    \n    global g_AnnotSV\n    \n    ## Check if DDD file has been downloaded\n    ########################################\n    set benignDir \"$g_AnnotSV(annotationsDir)/Annotations_$g_AnnotSV(organism)/SVincludedInFt/BenignSV/$genomeBuild\"\n    set DDDfileDownloaded [glob -nocomplain \"$benignDir/population_cnv_[string tolower $genomeBuild].txt.gz\"]\n    \n    if {$DDDfileDownloaded ne \"\"} {\n        # We have some DDD annotations to add in $benign*File\n        if {[info exists g_AnnotSV(benignText)]} {\n            puts $g_AnnotSV(benignText)\n            unset g_AnnotSV(benignText)\n        }\n        puts \"\\t   >>> $genomeBuild DDD parsing ([clock format [clock seconds] -format \"%B %d %Y - %H:%M\"])\"\n        \n        removeOverlappedGenesBenignFiles $genomeBuild\n        \n        set benignLossFile_Tmp \"$benignDir/benign_Loss_SV_$genomeBuild.tmp.bed\"\n        set benignGainFile_Tmp \"$benignDir/benign_Gain_SV_$genomeBuild.tmp.bed\"\n        set L_toWriteLoss {}\n        set L_toWriteGain {}\n        \n        set f [open \"| gzip -cd $DDDfileDownloaded\"]\n        while {! [eof $f]} {\n            set L [gets $f]\n            set Ls [split $L \"\\t\"]\n            \n            # Header:\n            #########\n            # #population_cnv_id      chr     start   end     deletion_observations   deletion_frequency      deletion_standard_error duplication_observations        duplication_frequency   duplication_standard_error      observations     frequency       standard_error  type    sample_size     study\n            \n            if {[regexp  \"^#population_cnv_id\" $L]} {\n                set i_id 0 ;# #population_cnv_id\n                set i_chr      [lsearch -regexp $Ls \"chr\"];     if {$i_chr == -1} {puts \"Bad syntax into $DDDfileDownloaded.\\nchr field not found - Exit with error\"; exit 2}\n                set i_start    [lsearch -regexp $Ls \"start\"];   if {$i_start == -1} {puts \"Bad syntax into $DDDfileDownloaded.\\nstart field not found - Exit with error\"; exit 2}\n                set i_end      [lsearch -regexp $Ls \"end\"];     if {$i_end == -1} {puts \"Bad syntax into $DDDfileDownloaded.\\nend field not found - Exit with error\"; exit 2}\n                set i_delfreq  [lsearch -regexp $Ls \"deletion_frequency\"];    if {$i_delfreq == -1} {puts \"Bad syntax into $DDDfileDownloaded.\\ndeletion_frequency field not found - Exit with error\"; exit 2}\n                set i_dupfreq  [lsearch -regexp $Ls \"duplication_frequency\"]; if {$i_dupfreq == -1} {puts \"Bad syntax into $DDDfileDownloaded.\\nduplication_frequency field not found - Exit with error\"; exit 2}\n                set i_sample_size [lsearch -regexp $Ls \"sample_size\"];        if {$i_sample_size == -1} {puts \"Bad syntax into $DDDfileDownloaded.\\nsample_size field not found - Exit with error\"; exit 2}\n                continue\n            }\n            \n            # Selection of the benign variants to keep:\n            ###########################################\n            set Ls [split $L \"\\t\"]\n            \n            set sample_size [lindex $Ls $i_sample_size]\n            # ≥ 500 individuals tested\n            if {$sample_size < $g_AnnotSV(minTotalNumber)} {continue}\n            # allele frequency > 0.1%\n            set id \"DDD:[lindex $Ls $i_id]\"\n            set chr [lindex $Ls $i_chr]\n            set start [lindex $Ls $i_start]\n            set end [lindex $Ls $i_end]\n            set delfreq [lindex $Ls $i_delfreq]\n            set dupfreq [lindex $Ls $i_dupfreq]\n            set coord \"$chr:${start}-$end\"\n            if {$delfreq > 0.001} {\n                set infos \"$chr\\t$start\\t$end\\t$id\\t$coord\\t[format \"%.4f\" $delfreq]\"\n                lappend L_toWriteLoss \"$infos\"\n            }\n            if {$dupfreq > 0.001} {\n                set infos \"$chr\\t$start\\t$end\\t$id\\t$coord\\t[format \"%.4f\" $dupfreq]\"\n                lappend L_toWriteGain \"$infos\"\n            }\n        }\n        close $f\n        \n        # Writing:\n        ##########\n        puts \"\\t       ([llength $L_toWriteLoss] SV Loss + [llength $L_toWriteGain] SV Gain)\"\n        if {$L_toWriteLoss ne {}} {\n            WriteTextInFile [join $L_toWriteLoss \"\\n\"] $benignLossFile_Tmp\n        }\n        if {$L_toWriteGain ne {}} {\n            WriteTextInFile [join $L_toWriteGain \"\\n\"] $benignGainFile_Tmp\n        }\n        \n        # Clean:\n        ########\n        file delete -force $DDDfileDownloaded\n    }\n    \n    return\n}\n\n\nproc check1000g_benignFile {genomeBuild} {\n    \n    global g_AnnotSV\n    \n    ## Check if 1000g file has been downloaded\n    ##########################################\n    set benignDir \"$g_AnnotSV(annotationsDir)/Annotations_$g_AnnotSV(organism)/SVincludedInFt/BenignSV/$genomeBuild\"\n    set 1000gFileDownloaded [glob -nocomplain \"$benignDir/ALL.wgs.mergedSV*.vcf.gz\"]\n    \n    if {$1000gFileDownloaded ne \"\"} {\n        # We have some 1000g annotations to add in $benign*File\n        if {[info exists g_AnnotSV(benignText)]} {\n            puts $g_AnnotSV(benignText)\n            unset g_AnnotSV(benignText)\n        }\n        puts \"\\t   >>> $genomeBuild 1000g parsing ([clock format [clock seconds] -format \"%B %d %Y - %H:%M\"])\"\n        \n        removeOverlappedGenesBenignFiles $genomeBuild\n        \n        set benignLossFile_Tmp \"$benignDir/benign_Loss_SV_$genomeBuild.tmp.bed\"\n        set benignGainFile_Tmp \"$benignDir/benign_Gain_SV_$genomeBuild.tmp.bed\"\n        set benignInsFile_Tmp \"$benignDir/benign_Ins_SV_$genomeBuild.tmp.bed\"\n        set benignInvFile_Tmp \"$benignDir/benign_Inv_SV_$genomeBuild.tmp.bed\"\n        set L_toWriteLoss {}\n        set L_toWriteGain {}\n        set L_toWriteIns {}\n        set L_toWriteInv {}\n        \n        # Split multiallelic sites into multiple rows:\n        ##############################################\n        regsub \".vcf.gz\" $1000gFileDownloaded \".tmp.vcf\" 1000gFileTmp\n        catch {eval exec $g_AnnotSV(bcftools) norm -m -both $1000gFileDownloaded > $1000gFileTmp} Message\n        if {[regexp -nocase \"error|fail\" $Message]} {\n            # we continue AnnotSV without splitting the multiallelic sites !\n            puts \"\\t   -- check1000g --\"\n            puts \"\\t   $g_AnnotSV(bcftools) norm -m -both $1000gFileDownloaded > $1000gFileTmp\"\n            foreach line [split $Message \"\\n\"] {\n                if {[regexp -nocase \"error|fail\" $line]} {puts \"\\t   $line\"}\n            }\n            puts \"\\t   => No multiallelic treatment done.\"\n            file delete -force $1000gFileTmp\n        }\n        \n        # Selection of the benign variants to keep:\n        ###########################################\n        if {[file exists $1000gFileTmp]} {\n            set f [open \"$1000gFileTmp\"]\n        } else {\n            set f [open \"| gzip -cd $1000gFileDownloaded\"]\n        }\n        while {![eof $f]} {\n            set L [gets $f]\n            if {[string index $L 0] eq \"#\" || $L eq \"\"} {continue}\n            # Line example:\n            # 1  645710  ALU_umary_ALU_2 A  <INS:ME:ALU>  .  .  AC=35;AF=0.00698882;AFR_AF=0;AMR_AF=0.0072;AN=5008;CS=ALU_umary;EAS_AF=0.0069;EUR_AF=0.0189;MEINFO=AluYa4_5,1,223,-;NS=2504;SAS_AF=0.0041;SITEPOST=0.9998;SVLEN=222;SVTYPE=ALU;TSD=null  GT  0|0  ...\n            set Ls [split $L \"\\t\"]\n            \n            set FILTER [lindex $Ls 6]\n            if {$FILTER != \"PASS\"} {continue}\n            \n            set chrom [lindex $Ls 0]\n            set pos [lindex $Ls 1]\n            # From VCF to BED format:\n            if {$pos ne 0} {set start [expr {$pos-1}]}\n            set L_infos [split [lindex $Ls 7] \";\"]\n            set ref [lindex $Ls 3]\n            set alt [lindex $Ls 4]\n            # Consider only the SV (not the SNV/indel in the VCF file)\n            ##########################################################\n            # Example of SV:\n            # - Type1: ref=\"G\" and alt=\"ACTGCTAACGATCCGTTTGCTGCTAACGATCTAACGATCGGGATTGCTAACGATCTCGGG\"\n            # - Type2: \"<INS>\", \"<DEL>\", ...\n            # - Type3: complex rearrangements with breakends: \"G]17:1584563]\"\n            if {![regexp \"<|\\\\\\[|\\\\\\]\" $alt]} {\n                set variantLength [expr {[string length $ref]-[string length $alt]}]\n                if {[expr {abs($variantLength)}]<$g_AnnotSV(SVminSize)} {continue}; # it is not an SV\n            }\n            set max -1\n            catch {unset AF}\n            catch {unset END}\n            set SVTYPE \"CNV\"\n            foreach inf $L_infos {\n                set inf [split $inf \"=\"]\n                set val [lindex $inf 0]\n                set $val [lindex $inf 1]\n                if {[regexp \"AF$\" $val]} {\n                    if {[set $val]>$max} {set max [set $val]}\n                }\n            }\n            # allele frequency > 0.1%\n            if {$max < 0.001} {continue}\n            \n            if {![info exists END]} {\n                # INS:ME (LINE1, ALU or SVA)\n                set END [expr {$pos+1}]\n            }\n            # SVTYPE is defined in $L_infos\n            # In case of a single value for \"alt\", SVTYPE is correctly defined (e.g. SVTYPE=DUP).\n            # In case of multiple alt (\"<CN0>,<CN2>\"), SVTYPE has a unique value (often: SVTYPE=CNV)\n            #   => We replace CNV with a more precise value <CN0> or <CNV2>\n            if {$SVTYPE eq \"CNV\"} {set SVTYPE \"$alt\"}\n            # Sometimes, we have \"SVTYPE=DUP\" and alt=<CN0>\n            # or \"SVTYPE=DEL\" and alt=<CN2>\n            # It's due to multiallelic sites. The good value is in \"alt\"\n            if {[regexp \"^<CN\" $alt]} {\n                set SVTYPE \"$alt\"\n            }\n            set coord \"$chrom:${pos}-$END\"\n            set infos \"$chrom\\t$pos\\t$END\\t1000g\\t$coord\\t[format \"%.4f\" $max]\"\n            \n            if {[regexp \"<CN0>|DEL\" $SVTYPE]} {\n                lappend L_toWriteLoss \"$infos\"\n            }\n            if {[regexp \"<CN\\[1-9\\]|ALU|LINE1|SVA\" $SVTYPE]} {\n                lappend L_toWriteGain \"$infos\"\n            }\n            if {$SVTYPE eq \"INS\"} {\n                lappend L_toWriteIns \"$infos\"\n            }\n            if {$SVTYPE eq \"INV\"} {\n                lappend L_toWriteInv \"$infos\"\n            }\n        }\n        \n        close $f\n        \n        # Writing:\n        ##########\n        puts \"\\t       ([llength $L_toWriteLoss] SV Loss + [llength $L_toWriteGain] SV Gain + [llength $L_toWriteIns] SV INS + [llength $L_toWriteInv] SV INV)\"\n        if {$L_toWriteLoss ne {}} {\n            WriteTextInFile [join $L_toWriteLoss \"\\n\"] $benignLossFile_Tmp\n        }\n        if {$L_toWriteGain ne {}} {\n            WriteTextInFile [join $L_toWriteGain \"\\n\"] $benignGainFile_Tmp\n        }\n        if {$L_toWriteIns ne {}} {\n            WriteTextInFile [join $L_toWriteIns \"\\n\"]  $benignInsFile_Tmp\n        }\n        if {$L_toWriteInv ne {}} {\n            WriteTextInFile [join $L_toWriteInv \"\\n\"]  $benignInvFile_Tmp\n        }\n        \n        # Clean:\n        ########\n        file delete -force $1000gFileDownloaded\n        file delete -force $1000gFileTmp\n    }\n    \n    return\n}\n\nproc checkdbVar_benignFile {genomeBuild} {\n    \n    global g_AnnotSV\n    \n    ## Check if dbVar SV files (del, dup or ins) have been downloaded\n    #################################################################\n    set benignDir \"$g_AnnotSV(annotationsDir)/Annotations_$g_AnnotSV(organism)/SVincludedInFt/BenignSV/$genomeBuild\"\n    set L_toWriteLoss {}\n    set L_toWriteGain {}\n    set L_toWriteIns {}\n    \n    # Deletions\n    set dbVarDelFileDownloaded \"$benignDir/$genomeBuild.nr_deletions.common.bed.gz\"\n    if {[file exists $dbVarDelFileDownloaded]} {\n        # We have some dbVar annotations to add in benign file\n        if {[info exists g_AnnotSV(benignText)]} {\n            puts $g_AnnotSV(benignText)\n            unset g_AnnotSV(benignText)\n        }\n        puts \"\\t   >>> $genomeBuild deletion dbVar parsing ([clock format [clock seconds] -format \"%B %d %Y - %H:%M\"])\"\n        \n        removeOverlappedGenesBenignFiles $genomeBuild\n        \n        set benignLossFile_Tmp \"$benignDir/benign_Loss_SV_$genomeBuild.tmp.bed\"\n        set f [open \"| gzip -cd $dbVarDelFileDownloaded\"]\n        while {![eof $f]} {\n            set L [gets $f]\n            if {$L eq \"\"} {continue}\n            set Ls [split $L \"\\t\"]\n            set chrom [lindex $Ls 0]\n            set start [lindex $Ls 1]\n            set end [lindex $Ls 2]\n            set coord \"$chrom:${start}-$end\"\n            set infos \"$chrom\\t$start\\t$end\\tdbVar\\t$coord\\t0.01\" ;# WARNING: As the frequency of these common variants is not given, it is assigned to 1% (minimum value of the AF in the curated dataset)\n            lappend L_toWriteLoss \"$infos\"\n        }\n        close $f\n        puts \"\\t       ([llength $L_toWriteLoss] SV Loss)\"\n    }\n    \n    # Duplications\n    set dbVarDupFileDownloaded \"$benignDir/$genomeBuild.nr_duplications.common.bed.gz\"\n    if {[file exists $dbVarDupFileDownloaded]} {\n        # We have some dbVar annotations to add in benign file\n        if {[info exists g_AnnotSV(benignText)]} {\n            puts $g_AnnotSV(benignText)\n            unset g_AnnotSV(benignText)\n        }\n        puts \"\\t   >>> $genomeBuild duplication dbVar parsing ([clock format [clock seconds] -format \"%B %d %Y - %H:%M\"])\"\n        \n        set benignGainFile_Tmp \"$benignDir/benign_Gain_SV_$genomeBuild.tmp.bed\"\n        set f [open \"| gzip -cd $dbVarDupFileDownloaded\"]\n        while {![eof $f]} {\n            set L [gets $f]\n            if {$L eq \"\"} {continue}\n            set Ls [split $L \"\\t\"]\n            set chrom [lindex $Ls 0]\n            set start [lindex $Ls 1]\n            set end [lindex $Ls 2]\n            set coord \"$chrom:${start}-$end\"\n            set infos \"$chrom\\t$start\\t$end\\tdbVar\\t$coord\\t0.01\" ;# WARNING: As the frequency of these common variants is not given, it is assigned to 1% (minimum value of the AF in the curated dataset)\n            lappend L_toWriteGain \"$infos\"\n        }\n        close $f\n        puts \"\\t       ([llength $L_toWriteGain] SV Gain)\"\n    }\n    \n    # Insertions\n    set dbVarInsFileDownloaded \"$benignDir/$genomeBuild.nr_insertions.common.bed.gz\"\n    if {[file exists $dbVarInsFileDownloaded]} {\n        # We have some dbVar annotations to add in benign file\n        if {[info exists g_AnnotSV(benignText)]} {\n            puts $g_AnnotSV(benignText)\n            unset g_AnnotSV(benignText)\n        }\n        puts \"\\t   >>> $genomeBuild insertion dbVar parsing ([clock format [clock seconds] -format \"%B %d %Y - %H:%M\"])\"\n        \n        set benignInsFile_Tmp \"$benignDir/benign_Ins_SV_$genomeBuild.tmp.bed\"\n        set f [open \"| gzip -cd $dbVarInsFileDownloaded\"]\n        while {![eof $f]} {\n            set L [gets $f]\n            if {$L eq \"\"} {continue}\n            set Ls [split $L \"\\t\"]\n            set chrom [lindex $Ls 0]\n            set start [lindex $Ls 1]\n            set end [lindex $Ls 2]\n            set coord \"$chrom:${start}-$end\"\n            set infos \"$chrom\\t$start\\t$end\\tdbVar\\t$coord\\t0.01\" ;# WARNING: As the frequency of these common variants is not given, it is assigned to 1% (minimum value of the AF in the curated dataset)\n            lappend L_toWriteIns \"$infos\"\n        }\n        close $f\n        puts \"\\t       ([llength $L_toWriteIns] SV INS)\"\n    }\n    \n    # Writing:\n    ##########\n    if {$L_toWriteLoss ne {}} {\n        WriteTextInFile [join $L_toWriteLoss \"\\n\"] $benignLossFile_Tmp\n        file delete -force $dbVarDelFileDownloaded\n    }\n    if {$L_toWriteGain ne {}} {\n        WriteTextInFile [join $L_toWriteGain \"\\n\"] $benignGainFile_Tmp\n        file delete -force $dbVarDupFileDownloaded\n    }\n    if {$L_toWriteIns ne {}} {\n        WriteTextInFile [join $L_toWriteIns \"\\n\"]  $benignInsFile_Tmp\n        file delete -force $dbVarInsFileDownloaded\n    }\n    \n    return\n}\n\nproc checkIMH_benignFile {genomeBuild} {\n    \n    global g_AnnotSV\n    \n    ## Check if IMH file has been downloaded\n    ########################################\n    set benignDir \"$g_AnnotSV(annotationsDir)/Annotations_$g_AnnotSV(organism)/SVincludedInFt/BenignSV/$genomeBuild\"\n    set IMHfileDownloaded [glob -nocomplain \"$benignDir/*callset.public.bedpe.gz\"]\n    \n    if {$IMHfileDownloaded ne \"\"} {\n        # We have some IMH annotations to add in $benign*File\n        if {[info exists g_AnnotSV(benignText)]} {\n            puts $g_AnnotSV(benignText)\n            unset g_AnnotSV(benignText)\n        }\n        puts \"\\t   >>> $genomeBuild IMH parsing ([clock format [clock seconds] -format \"%B %d %Y - %H:%M\"])\"\n        \n        removeOverlappedGenesBenignFiles $genomeBuild\n        \n        set benignLossFile_Tmp \"$benignDir/benign_Loss_SV_$genomeBuild.tmp.bed\"\n        set benignGainFile_Tmp \"$benignDir/benign_Gain_SV_$genomeBuild.tmp.bed\"\n        set benignInsFile_Tmp \"$benignDir/benign_Ins_SV_$genomeBuild.tmp.bed\"\n        set benignInvFile_Tmp \"$benignDir/benign_Inv_SV_$genomeBuild.tmp.bed\"\n        set L_toWriteLoss {}\n        set L_toWriteGain {}\n        set L_toWriteIns {}\n        set L_toWriteInv {}\n        \n        set f [open \"| gzip -cd $IMHfileDownloaded\"]\n        while {![eof $f]} {\n            set L [gets $f]\n            # Header(bedpe):\n            ################\n            #CHROM_A        START_A END_A   CHROM_B START_B END_B   ID      QUAL    STRAND_A        STRAND_B        TYPE    FILTER  NAME_A  REF_A   ALT_A   NAME_B  REF_B   ALT_B   INFO_A  INFO_B\n            #1       10361   10590   15      102520301       102520447       2838    47911.3 -       -       BND     LOW     2838_1  N       [15:102520406[N 2838_2  N       [1:10567[N      SVTYPE=BND;POS=10567;STRANDS=--:97;IMPRECISE;CIPOS=-205,24;CIEND=-104,42;CIPOS95=-20,20;CIEND95=-6,6;MATEID=2838_2;EVENT=2838;SU=97;PE=97;SR=0;ALG=PROD;AF=0.07568;NSAMP=1274;MSQ=37.02;AN=16834;AC=1274;NS=8438;AC_Hom=0;AC_Het=1275;AC_Hemi=0;MAF=0.0755511;HWE=4.03332e-23;NFAM=1263     SVTYPE=BND;POS=102520406;STRANDS=--:97;IMPRECISE;CIPOS=-104,42;CIEND=-205,24;CIPOS95=-6,6;CIEND95=-20,20;MATEID=2838_1;EVENT=2838;SECONDARY;SU=97;PE=97;SR=0;ALG=PROD;AF=0.07568;NSAMP=1274;MSQ=37.02;AN=16834;AC=1274;NS=8438;AC_Hom=0;AC_Het=1275;AC_Hemi=0;MAF=0.0755511;HWE=4.03332e-23;NFAM=1263\n            set Ls [split $L \"\\t\"]\n            if {[regexp  \"^#CHROM_A\" $L]} {\n                set i_chrA 0 ;# #CHROM_A\n                set i_chrB [lsearch -regexp $Ls \"CHROM_B\"]; if {$i_chrB == -1} {puts \"Bad syntax into $IMHfileDownloaded.\\nCHROM_B field not found - Exit with error\"; exit 2}\n                set i_start [lsearch -regexp $Ls \"START_A\"]; if {$i_start == -1} {puts \"Bad syntax into $IMHfileDownloaded.\\nSTART_A field not found - Exit with error\"; exit 2}\n                set i_end [lsearch -regexp $Ls \"END_B\"]; if {$i_end == -1} {puts \"Bad syntax into $IMHfileDownloaded.\\nEND_B field not found - Exit with error\"; exit 2}\n                set i_svtype [lsearch -regexp $Ls \"TYPE\"]; if {$i_svtype == -1} {puts \"Bad syntax into $IMHfileDownloaded.\\nTYPE field not found - Exit with error\"; exit 2}\n                set i_annotations [lsearch -regexp $Ls \"INFO_A\"]; if {$i_annotations == -1} {puts \"Bad syntax into $IMHfileDownloaded.\\nINFO_A field not found - Exit with error\"; exit 2}\n            }\n            if {[string index $L 0] eq \"#\" || $L eq \"\"} {continue}\n            \n            # Selection of the benign variants to keep:\n            ###########################################\n            regsub \"chr\" [lindex $Ls $i_chrA] \"\" chromA\n            regsub \"chr\" [lindex $Ls $i_chrB] \"\" chromB\n            if {$chromA ne $chromB} {continue}\n            set Annotations [lindex $Ls $i_annotations]\n            if {![regexp \";AF=(.+?);\" $Annotations match AF]} {continue}\n            if {$AF < 0.001} {continue}\n            set start  [lindex $Ls $i_start]\n            set end    [lindex $Ls $i_end]\n            set SVTYPE [normalizeSVtype [lindex $Ls $i_svtype]]\n            set coord \"$chromA:${start}-$end\"\n            set infos \"$chromA\\t$start\\t$end\\tIMH\\t$coord\\t[format \"%.4f\" $AF]\"\n            \n            if {$SVTYPE eq \"DEL\"} {\n                lappend L_toWriteLoss \"$infos\"\n            }\n            if {$SVTYPE eq \"DUP\"} {\n                lappend L_toWriteGain \"$infos\"\n            }\n            if {$SVTYPE eq \"INS\"} {\n                lappend L_toWriteIns \"$infos\"\n            }\n            if {$SVTYPE eq \"INV\"} {\n                lappend L_toWriteInv \"$infos\"\n            }\n        }\n        close $f\n        \n        # Writing:\n        ##########\n        puts \"\\t       ([llength $L_toWriteLoss] SV Loss + [llength $L_toWriteGain] SV Gain + [llength $L_toWriteIns] SV INS + [llength $L_toWriteInv] SV INV)\"\n        \n        if {$L_toWriteLoss ne {}} {\n            WriteTextInFile [join $L_toWriteLoss \"\\n\"] $benignLossFile_Tmp\n        }\n        if {$L_toWriteGain ne {}} {\n            WriteTextInFile [join $L_toWriteGain \"\\n\"] $benignGainFile_Tmp\n        }\n        if {$L_toWriteIns ne {}} {\n            WriteTextInFile [join $L_toWriteIns \"\\n\"]  $benignInsFile_Tmp\n        }\n        if {$L_toWriteInv ne {}} {\n            WriteTextInFile [join $L_toWriteInv \"\\n\"]  $benignInvFile_Tmp\n        }\n        # Clean:\n        ########\n        file delete -force $IMHfileDownloaded\n        file delete -force [glob -nocomplain \"Build*.public.v2.vcf.gz\"]\n        file delete -force [glob -nocomplain \"Supplementary_File_*.zip\"]\n    }\n    \n    return\n}\n\n\n\nproc checkCMRI_benignFile {genomeBuild} {\n    \n    global g_AnnotSV\n    \n    ## Check if CMRI file has been downloaded\n    ############################################\n    set benignDir \"$g_AnnotSV(annotationsDir)/Annotations_$g_AnnotSV(organism)/SVincludedInFt/BenignSV/$genomeBuild\"\n    set CMRIfileDownloaded [lindex [glob -nocomplain \"$benignDir/pb_joint_merged.sv.vcf\"] end]\n    \n    if {$CMRIfileDownloaded ne \"\"} {\n        # We have some CMRI annotations to add in $benign*File\n        if {[info exists g_AnnotSV(benignText)]} {\n            puts $g_AnnotSV(benignText)\n            unset g_AnnotSV(benignText)\n        }\n        puts \"\\t   >>> $genomeBuild CMRI parsing ([clock format [clock seconds] -format \"%B %d %Y - %H:%M\"])\"\n        \n        removeOverlappedGenesBenignFiles $genomeBuild\n        \n        set benignLossFile_Tmp \"$benignDir/benign_Loss_SV_$genomeBuild.tmp.bed\"\n        set benignGainFile_Tmp \"$benignDir/benign_Gain_SV_$genomeBuild.tmp.bed\"\n        set benignInsFile_Tmp \"$benignDir/benign_Ins_SV_$genomeBuild.tmp.bed\"\n        set benignInvFile_Tmp \"$benignDir/benign_Inv_SV_$genomeBuild.tmp.bed\"\n        set L_toWriteLoss {}\n        set L_toWriteGain {}\n        set L_toWriteIns {}\n        set L_toWriteInv {}\n        set f [open \"$CMRIfileDownloaded\"]\n        while {! [eof $f]} {\n            set L [gets $f]\n            set Ls [split $L \"\\t\"]\n            if {[regexp \"^#\" $L]} {continue}\n            set infos [lindex $Ls 7]\n            \n            # Selection of the benign variants to keep:\n            ###########################################\n            # Criteria:\n            # - ≥ 500 individuals tested\n            # - ≥ $g_AnnotSV(SVminSize) bp in size (default 50)\n            # - Allele frequency [0.001-0.1]\n            # - \"DUP”, “DEL”, “INS” or “INV” SV type\n            if {![regexp \"END=(\\[^;\\]+)?;.*SVTYPE=(\\[^;\\]+)?;.*SVLEN=(\\[^;\\]+)?;.*SVN=(\\[^;\\]+)?;.*SVF=(\\[^;\\]+)?\" $infos match end svtype svlen totalcount freq]} {continue}\n            if {$totalcount < 500} {continue}\n            if {[expr abs($svlen)] < $g_AnnotSV(SVminSize)} {continue}\n            if {$freq < 0.001} {continue}\n            regsub \"chr\" [lindex $Ls 0] \"\" chrom\n            set start [lindex $Ls 1]\n            # From VCF to BED format:\n            if {$start ne 0} {set start [expr {$start-1}]}\n            set id    [lindex $Ls 2]\n            set ref   [lindex $Ls 3]\n            set alt   [lindex $Ls 4]\n            set coord \"${chrom}:${start}-$end\"\n            if {$end eq $start} {set end [expr {$start+1}]}\n            if {$end < $start} {set i $start; set start $end; set end $i}\n            \n            if {$svtype eq \"DEL\"} {\n                lappend L_toWriteLoss \"$chrom\\t$start\\t$end\\tCMRI:$id\\t$coord\\t[format \"%.4f\" $freq]\"\n            } elseif {$svtype eq \"DUP\"} {\n                lappend L_toWriteGain \"$chrom\\t$start\\t$end\\tCMRI:$id\\t$coord\\t[format \"%.4f\" $freq]\"\n            } elseif {$svtype eq \"INS\"} {\n                lappend L_toWriteIns \"$chrom\\t$start\\t$end\\tCMRI:$id\\t$coord\\t[format \"%.4f\" $freq]\"\n            } elseif {$svtype eq \"INV\"} {\n                lappend L_toWriteInv \"$chrom\\t$start\\t$end\\tCMRI:$id\\t$coord\\t[format \"%.4f\" $freq]\"\n            }\n        }\n        close $f\n        \n        # Writing:\n        ##########\n        puts \"\\t       ([llength $L_toWriteLoss] SV Loss + [llength $L_toWriteGain] SV Gain + [llength $L_toWriteIns] SV INS + [llength $L_toWriteInv] SV INV)\"\n        if {$L_toWriteLoss ne {}} {\n            WriteTextInFile [join $L_toWriteLoss \"\\n\"] $benignLossFile_Tmp\n        }\n        if {$L_toWriteGain ne {}} {\n            WriteTextInFile [join $L_toWriteGain \"\\n\"] $benignGainFile_Tmp\n        }\n        if {$L_toWriteIns ne {}} {\n            WriteTextInFile [join $L_toWriteIns \"\\n\"]  $benignInsFile_Tmp\n        }\n        if {$L_toWriteInv ne {}} {\n            WriteTextInFile [join $L_toWriteInv \"\\n\"]  $benignInvFile_Tmp\n        }\n        \n        # Clean:\n        ########\n        file delete -force $CMRIfileDownloaded\n    }\n    \n    return\n}\n\n\nproc checkPacBioCoLoRS_benignFile {genomeBuild} {\n    \n    global g_AnnotSV\n    \n    ## Check if  file has been downloaded\n    ############################################\n    set benignDir \"$g_AnnotSV(annotationsDir)/Annotations_$g_AnnotSV(organism)/SVincludedInFt/BenignSV/$genomeBuild\"\n    set PacBioCoLoRSfileDownloaded [lindex [glob -nocomplain \"$benignDir/CoLoRSdb.$genomeBuild.v1.0.0.pbsv.jasmine.vcf.gz\"] end]\n    \n    if {$PacBioCoLoRSfileDownloaded ne \"\"} {\n        # We have some PacBioCoLoRS annotations to add in $benign*File\n        if {[info exists g_AnnotSV(benignText)]} {\n            puts $g_AnnotSV(benignText)\n            unset g_AnnotSV(benignText)\n        }\n        puts \"\\t   >>> $genomeBuild PacBioCoLoRS parsing ([clock format [clock seconds] -format \"%B %d %Y - %H:%M\"])\"\n        \n        removeOverlappedGenesBenignFiles $genomeBuild\n        \n        set benignLossFile_Tmp \"$benignDir/benign_Loss_SV_$genomeBuild.tmp.bed\"\n        set benignInsFile_Tmp \"$benignDir/benign_Ins_SV_$genomeBuild.tmp.bed\"\n        set benignInvFile_Tmp \"$benignDir/benign_Inv_SV_$genomeBuild.tmp.bed\"\n        set L_toWriteLoss {}\n        set L_toWriteIns {}\n        set L_toWriteInv {}\n        set f [open \"| gzip -cd $PacBioCoLoRSfileDownloaded\"]\n        while {! [eof $f]} {\n            set L [gets $f]\n            set Ls [split $L \"\\t\"]\n            if {[regexp \"^#\" $L]} {continue}\n            set infos [lindex $Ls 7]\n            \n            # Selection of the benign variants to keep:\n            ###########################################\n            # Criteria:\n            # - AN ≥ 500\n            # - DEL and INV ≥ $g_AnnotSV(SVminSize) bp in size (default 50)\n            # - AF > 0.05\n            # - “DEL”, “INS” or “INV” SV type\n            # Example line: SVTYPE=DEL;END=3210;SVLEN=-42;AC=79;AN=2762;NS=1381;AF=0.0286025;AC_Het=55;AC_Hom=24;AC_Hemi=0;HWE=1.153\n            if {![regexp \"SVTYPE=(\\[^;\\]+)?;END=(\\[^;\\]+)?;.*SVLEN=(\\[^;\\]+)?;.*AN=(\\[^;\\]+)?;.*AF=(\\[^;\\]+)?\" $infos match svtype end svlen totalcount freq]} {continue}\n            if {$totalcount < 500} {continue}\n            if {[expr abs($svlen)] < $g_AnnotSV(SVminSize)} {continue}\n            if {$freq < 0.05} {continue}\n            regsub \"chr\" [lindex $Ls 0] \"\" chrom\n            set start [lindex $Ls 1]\n            # From VCF to BED format:\n            if {$start ne 0} {set start [expr {$start-1}]}\n            set ref   [lindex $Ls 3]\n            set alt   [lindex $Ls 4]\n            set coord \"${chrom}:${start}-$end\"\n            if {$end eq $start} {set end [expr {$start+1}]}\n            if {$end < $start} {set i $start; set start $end; set end $i}\n            \n            \n            if {$svtype eq \"DEL\"} {\n                lappend L_toWriteLoss \"$chrom\\t$start\\t$end\\tPacBioCoLoRS\\t$coord\\t[format \"%.4f\" $freq]\"\n            } elseif {$svtype eq \"INS\"} {\n                lappend L_toWriteIns \"$chrom\\t$start\\t$end\\tPacBioCoLoRS\\t$coord\\t[format \"%.4f\" $freq]\"\n            } elseif {$svtype eq \"INV\"} {\n                lappend L_toWriteInv \"$chrom\\t$start\\t$end\\tPacBioCoLoRS\\t$coord\\t[format \"%.4f\" $freq]\"\n            }\n        }\n        close $f\n        \n        # Writing:\n        ##########\n        puts \"\\t       ([llength $L_toWriteLoss] SV Loss + [llength $L_toWriteIns] SV INS + [llength $L_toWriteInv] SV INV)\"\n        if {$L_toWriteLoss ne {}} {\n            WriteTextInFile [join $L_toWriteLoss \"\\n\"] $benignLossFile_Tmp\n        }\n        if {$L_toWriteIns ne {}} {\n            WriteTextInFile [join $L_toWriteIns \"\\n\"]  $benignInsFile_Tmp\n        }\n        if {$L_toWriteInv ne {}} {\n            WriteTextInFile [join $L_toWriteInv \"\\n\"]  $benignInvFile_Tmp\n        }\n        \n        # Clean:\n        ########\n        file delete -force $PacBioCoLoRSfileDownloaded\n    }\n    \n    return\n}\n\n\nproc checkFGR_benignFile {genomeBuild} {\n    \n    global g_AnnotSV\n    \n    ## Check if FGR file has been downloaded\n    ########################################\n    set benignDir \"$g_AnnotSV(annotationsDir)/Annotations_$g_AnnotSV(organism)/SVincludedInFt/BenignSV/$genomeBuild\"\n    set FGRfileDownloaded [glob -nocomplain \"$benignDir/FGR_benign_*_SV_$genomeBuild.bed\"]\n    \n    \n    ## Writing\n    ##########\n    if {$FGRfileDownloaded ne \"\"} {\n        # We have some FGR annotations to add in $benign*File\n        if {[info exists g_AnnotSV(benignText)]} {\n            puts $g_AnnotSV(benignText)\n            unset g_AnnotSV(benignText)\n        }\n        puts \"\\t   >>> $genomeBuild FGR parsing ([clock format [clock seconds] -format \"%B %d %Y - %H:%M\"])\"\n        \n        removeOverlappedGenesBenignFiles $genomeBuild\n        \n        set benignLossFile_Tmp \"$benignDir/benign_Loss_SV_$genomeBuild.tmp.bed\"\n        set benignGainFile_Tmp \"$benignDir/benign_Gain_SV_$genomeBuild.tmp.bed\"\n        set benignInsFile_Tmp \"$benignDir/benign_Ins_SV_$genomeBuild.tmp.bed\"\n        set benignInvFile_Tmp \"$benignDir/benign_Inv_SV_$genomeBuild.tmp.bed\"\n        \n        if {[file exist \"$benignDir/FGR_benign_Gain_SV_$genomeBuild.bed\"]} {\n            set L_toWriteGain [LinesFromFile \"$benignDir/FGR_benign_Gain_SV_$genomeBuild.bed\"]\n            set nGain [llength $L_toWriteGain]\n            WriteTextInFile [join $L_toWriteGain \"\\n\"] $benignGainFile_Tmp\n        }\n        if {[file exist \"$benignDir/FGR_benign_Loss_SV_$genomeBuild.bed\"]} {\n            set L_toWriteLoss [LinesFromFile \"$benignDir/FGR_benign_Loss_SV_$genomeBuild.bed\"]\n            set nLoss [llength $L_toWriteLoss]\n            WriteTextInFile [join $L_toWriteLoss \"\\n\"] $benignLossFile_Tmp\n        }\n        if {[file exist \"$benignDir/FGR_benign_Ins_SV_$genomeBuild.bed\"]} {\n            set L_toWriteIns [LinesFromFile \"$benignDir/FGR_benign_Ins_SV_$genomeBuild.bed\"]\n            set nIns [llength $L_toWriteIns]\n            WriteTextInFile [join $L_toWriteIns \"\\n\"] $benignInsFile_Tmp\n        }\n        if {[file exist \"$benignDir/FGR_benign_Inv_SV_$genomeBuild.bed\"]} {\n            set L_toWriteInv [LinesFromFile \"$benignDir/FGR_benign_Inv_SV_$genomeBuild.bed\"]\n            set nInv [llength $L_toWriteInv]\n            WriteTextInFile [join $L_toWriteInv \"\\n\"] $benignInvFile_Tmp\n        }\n        \n        puts \"\\t       ($nLoss SV Loss + $nGain SV Gain)\"\n        puts \"\\t       ($nIns INS + $nInv INV)\"\n        \n        # Clean:\n        ########\n        foreach f $FGRfileDownloaded {\n            file delete -force $f\n        }\n        \n    }\n    \n    return\n}\n\n#########################################################################################################################################################################\n#########################################################################################################################################################################\n#########################################################################################################################################################################\n\n\n\n\n# Return the completely overlapped SV annotation\nproc benignSVannotation {SVchrom SVstart SVend} {\n    \n    global g_AnnotSV\n    global benignText\n    \n    set benignDir \"$g_AnnotSV(annotationsDir)/Annotations_$g_AnnotSV(organism)/SVincludedInFt/BenignSV/$g_AnnotSV(genomeBuild)\"\n    \n    if {![info exists benignText(DONE)]} {\n        # headerOutput \"B_gain_source B_gain_coord B_gain_AFmax B_loss_source B_loss_coord B_loss_AFmax\"\n        # + (if user selected) \"B_ins_source B_ins_coord B_ins_AFmax B_inv_source B_inv_coord B_inv_AFmax\"\n        \n        set L_benignText(Empty) {}\n        foreach svtype {\"gain\" \"loss\" \"ins\" \"inv\"} {\n            # Keep only the user requested columns (defined in the configfile)\n            if {[lsearch -regexp \"$g_AnnotSV(outputColHeader)\" \"^B_${svtype}_\"] eq -1} { continue }\n            lappend L_benignText(Empty) {*}{\"\" \"\" \"\"}\n        }\n        set benignText(Empty) \"[join $L_benignText(Empty) \"\\t\"]\"\n        \n        foreach svtype {\"Gain\" \"Loss\" \"Ins\" \"Inv\"} {\n            \n            # Keep only the user requested columns (defined in the configfile)\n            if {[lsearch -regexp \"$g_AnnotSV(outputColHeader)\" \"^B_[string tolower ${svtype}]_\"] eq -1} { continue }\n            \n            # Intersect\n            set benignBEDfile [glob -nocomplain \"$benignDir/benign_${svtype}_SV_$g_AnnotSV(genomeBuild).sorted.bed\"]\n            regsub -nocase \"(.formatted)?.bed$\" $g_AnnotSV(bedFile) \".intersect.benign-$svtype\" tmpFile\n            set tmpFile \"$g_AnnotSV(outputDir)/[file tail $tmpFile]\"\n            file delete -force $tmpFile\n            # -f 1.0 : the feature in B overlaps at least 100% of the A feature.\n            if {[catch {exec $g_AnnotSV(bedtools) intersect -sorted -a $g_AnnotSV(fullAndSplitBedFile) -b $benignBEDfile -f 1.0 -wa -wb > $tmpFile} Message]} {\n                if {[catch {exec $g_AnnotSV(bedtools) intersect -a $g_AnnotSV(fullAndSplitBedFile) -b $benignBEDfile -f 1.0 -wa -wb > $tmpFile} Message]} {\n                    puts \"-- benignSVAnnotation, $svtype --\"\n                    puts \"$g_AnnotSV(bedtools) intersect -sorted -a $g_AnnotSV(fullAndSplitBedFile) -b $benignBEDfile -f 1.0 -wa -wb > $tmpFile\"\n                    puts \"$Message\"\n                    puts \"Exit with error\"\n                    exit 2\n                }\n            }\n            \n            # Parse\n            set f [open $tmpFile]\n            while {![eof $f]} {\n                set L [gets $f]\n                if {$L eq \"\"} {continue}\n                set Ls [split $L \"\\t\"]\n                \n                set SVtoAnn_chrom [lindex $Ls 0]\n                set SVtoAnn_start [lindex $Ls 1]\n                set SVtoAnn_end   [lindex $Ls 2]\n                \n                set benign_AF [lindex $Ls end]\n                # An SV is considered benign if its allele frequency > $g_AnnotSV(benignAF)\n                # (default 0.01)\n                if {[string is double $benign_AF] && $benign_AF < $g_AnnotSV(benignAF)} {continue}\n                set benign_coord [lindex $Ls end-1]\n                set benign_source [lindex $Ls end-2]\n                \n                set SVtoAnn \"$SVtoAnn_chrom,$SVtoAnn_start,$SVtoAnn_end\"\n                lappend L_allSVtoAnn $SVtoAnn\n                lappend L_benign_coord($SVtoAnn,$svtype) $benign_coord\n                lappend L_benign_source($SVtoAnn,$svtype) $benign_source\n                if {![info exists L_benign_AF($SVtoAnn,$svtype)]} {\n                    if {[string is double $benign_AF]} {\n                        set L_benign_AF($SVtoAnn,$svtype) \"$benign_AF\"\n                    } else {\n                        set L_benign_AF($SVtoAnn,$svtype) \"\"\n                    }\n                } else {\n                    if {[string is double $benign_AF] && $benign_AF > $L_benign_AF($SVtoAnn,$svtype)} {\n                        set L_benign_AF($SVtoAnn,$svtype) \"$benign_AF\"\n                    }\n                }\n            }\n            file delete -force $tmpFile\n        }\n        \n        # Loading benign final annotation for each SV\n        if {[info exists L_allSVtoAnn]} {\n            foreach SVtoAnn [lsort -unique $L_allSVtoAnn] {\n                \n                foreach svtype {\"Gain\" \"Loss\" \"Ins\" \"Inv\"} {\n                    \n                    # Keep only the user requested columns (defined in the configfile)\n                    if {[lsearch -regexp \"$g_AnnotSV(outputColHeader)\" \"^B_[string tolower ${svtype}]_\"] eq -1} { continue }\n                    \n                    if {[info exists L_benign_coord($SVtoAnn,$svtype)]} {\n                        lappend L_benignText($SVtoAnn) \"[join [lsort -unique $L_benign_source($SVtoAnn,$svtype)] \";\"]\"\n                        lappend L_benignText($SVtoAnn) \"[join $L_benign_coord($SVtoAnn,$svtype) \";\"]\"\n                        if {[set g_AnnotSV(metrics)] eq \"fr\"} {\n                            # Change metrics from \".\" to \",\"\n                            # We remove the exponential nomenclature: [expr {9.9443e-01}] = 0.99443\n                            catch {regsub -all {\\.} [expr {$L_benign_AF($SVtoAnn,$svtype)}] \",\" L_benign_AF($SVtoAnn,$svtype)}\n                        }\n                        lappend L_benignText($SVtoAnn) \"$L_benign_AF($SVtoAnn,$svtype)\"\n                    } else {\n                        lappend L_benignText($SVtoAnn) \"\"\n                        lappend L_benignText($SVtoAnn) \"\"\n                        lappend L_benignText($SVtoAnn) \"\"\n                    }\n                }\n                set benignText($SVtoAnn) [join $L_benignText($SVtoAnn) \"\\t\"]\n            }\n        }\n        set benignText(DONE) 1\n    }\n    \n    if {[info exist benignText($SVchrom,$SVstart,$SVend)]} {\n        return $benignText($SVchrom,$SVstart,$SVend)\n    } else {\n        return $benignText(Empty)\n    }\n}\n\n\n# Return the PARTIALLY overlapped (po) benign SV annotation for the full lines\n# (nothing done for the split lines)\n# headerOutput: po_B_gain_allG_source po_B_gain_allG_coord po_B_gain_someG_source po_B_gain_someG_coord\n#               po_B_gain_loss_source po_B_loss_allG_coord po_B_loss_someG_source po_B_loss_someG_coord\nproc poBenignSVannotation {SVchrom SVstart SVend L_GenesSVtoAnnotate} {\n    \n    global g_AnnotSV\n    global poBenignIntersectDone\n    global L_genes\n    global benignCoordSource\n    \n    \n    set SVtoAnn \"$SVchrom,$SVstart,$SVend\"\n    set benignDir \"$g_AnnotSV(annotationsDir)/Annotations_$g_AnnotSV(organism)/SVincludedInFt/BenignSV/$g_AnnotSV(genomeBuild)\"\n    \n    if {![info exists poBenignIntersectDone]} {\n        \n        foreach svtype {\"Gain\" \"Loss\"} {\n            # Keep only the user requested columns (defined in the configfile)\n            if {[lsearch -regexp \"$g_AnnotSV(outputColHeader)\" \"^po_B_[string tolower ${svtype}]_\"] eq -1} { continue }\n            \n            # List the genes overlapping with the benign SV\n            # (benign SV without overlapped genes are not listed)\n            set overlappedGenes_in_benign${svtype}File \"$benignDir/overlappedGenes_${g_AnnotSV(tx)}_in_benign_${svtype}_SV_${g_AnnotSV(genomeBuild)}.tsv\"\n            foreach L [LinesFromFile [set overlappedGenes_in_benign${svtype}File]] {\n                set coordBenignSV [lindex $L 0] ;# e.g. 16:47182577-47188882\n                lappend L_genes($coordBenignSV) [lindex $L 1]\n            }\n            \n            # Intersect\n            set benignBEDfile [glob -nocomplain \"$benignDir/benign_${svtype}_SV_$g_AnnotSV(genomeBuild).sorted.bed\"]\n            regsub -nocase \"(.formatted)?.bed$\" $g_AnnotSV(bedFile) \".intersect.po_benign-$svtype\" tmpFile\n            set tmpFile \"$g_AnnotSV(outputDir)/[file tail $tmpFile]\"\n            file delete -force $tmpFile\n            if {[catch {exec $g_AnnotSV(bedtools) intersect -sorted -a $g_AnnotSV(bedFile) -b $benignBEDfile -wa -wb > $tmpFile} Message]} {\n                if {[catch {exec $g_AnnotSV(bedtools) intersect -a $g_AnnotSV(bedFile) -b $benignBEDfile -wa -wb > $tmpFile} Message]} {\n                    puts \"-- benignSVAnnotation, $svtype --\"\n                    puts \"$g_AnnotSV(bedtools) intersect -sorted -a $g_AnnotSV(bedFile) -b $benignBEDfile -wa -wb > $tmpFile\"\n                    puts \"$Message\"\n                    puts \"Exit with error\"\n                    exit 2\n                }\n            }\n            \n            # Parse intersect file\n            set f [open $tmpFile]\n            while {![eof $f]} {\n                set L [gets $f]\n                if {$L eq \"\"} {continue}\n                set Ls [split $L \"\\t\"]\n                \n                set SVtoAnn_chrom [lindex $Ls 0]\n                set SVtoAnn_start [lindex $Ls 1]\n                set SVtoAnn_end   [lindex $Ls 2]\n                \n                # An SV is considered benign if its allele frequency > $g_AnnotSV(benignAF)\n                # (default 0.01)\n                set benign_AF [lindex $Ls end]\n                if {[string is double $benign_AF] && $benign_AF < $g_AnnotSV(benignAF)} {continue}\n                \n                set benign_coord [lindex $Ls end-1] ;# e.g. 16:47182577-47188882\n                set benign_source [lindex $Ls end-2]\n                \n                lappend benignCoordSource($SVtoAnn_chrom,$SVtoAnn_start,$SVtoAnn_end,$svtype) \"$benign_coord $benign_source\"\n            }\n            close $f\n        }\n        set poBenignIntersectDone 1\n    }\n    \n    # Annotations\n    foreach svtype {\"Gain\" \"Loss\"} {\n        \n        # Keep only the user requested columns (defined in the configfile)\n        if {[lsearch -regexp \"$g_AnnotSV(outputColHeader)\" \"^po_B_[string tolower ${svtype}]_\"] eq -1} { continue }\n        \n        if {[info exists benignCoordSource($SVtoAnn,$svtype)]} {\n            foreach {benign_coord benign_source} $benignCoordSource($SVtoAnn,$svtype) {\n                # benign_coord: 16:47182577-47188882\n                if {[info exists L_genes($benign_coord)]} {\n                    set allG 1\n                    foreach gN [split $L_GenesSVtoAnnotate \";\"] {\n                        if {![regexp $gN [split $L_genes($benign_coord) \";\"]]} {\n                            set allG 0\n                            break\n                        }\n                    }\n                    if {$allG} {\n                        lappend L_benign_coord($SVtoAnn,$svtype,allG) $benign_coord\n                        lappend L_benign_source($SVtoAnn,$svtype,allG) $benign_source\n                    } else {\n                        lappend L_benign_coord($SVtoAnn,$svtype,someG) $benign_coord\n                        lappend L_benign_source($SVtoAnn,$svtype,someG) $benign_source\n                    }\n                } else {\n                    lappend L_benign_coord($SVtoAnn,$svtype,someG) $benign_coord\n                    lappend L_benign_source($SVtoAnn,$svtype,someG) $benign_source\n                }\n            }\n        }\n        \n        # Loading benign final annotation for each SV\n        # (AnnotSV restricts the number of overlapping reported features to 20)\n        if {[info exists L_benign_coord($SVtoAnn,$svtype,allG)]} {\n            if {[llength $L_benign_source($SVtoAnn,$svtype,allG)] > 20} {\n                lappend L_poBenignText($SVtoAnn) \"[join [lrange $L_benign_source($SVtoAnn,$svtype,allG) 0 19] \";\"]...\"\n                lappend L_poBenignText($SVtoAnn) \"[join [lrange $L_benign_coord($SVtoAnn,$svtype,allG) 0 19] \";\"]...\"\n            } else {\n                lappend L_poBenignText($SVtoAnn) \"[join $L_benign_source($SVtoAnn,$svtype,allG) \";\"]\"\n                lappend L_poBenignText($SVtoAnn) \"[join $L_benign_coord($SVtoAnn,$svtype,allG) \";\"]\"\n            }\n        } else {\n            lappend L_poBenignText($SVtoAnn) \"\"\n            lappend L_poBenignText($SVtoAnn) \"\"\n        }\n        if {[info exists L_benign_coord($SVtoAnn,$svtype,someG)]} {\n            if {[llength $L_benign_source($SVtoAnn,$svtype,someG)] > 20} {\n                lappend L_poBenignText($SVtoAnn) \"[join [lrange $L_benign_source($SVtoAnn,$svtype,someG) 0 19] \";\"]...\"\n                lappend L_poBenignText($SVtoAnn) \"[join [lrange $L_benign_coord($SVtoAnn,$svtype,someG) 0 19] \";\"]...\"\n            } else {\n                lappend L_poBenignText($SVtoAnn) \"[join $L_benign_source($SVtoAnn,$svtype,someG) \";\"]\"\n                lappend L_poBenignText($SVtoAnn) \"[join $L_benign_coord($SVtoAnn,$svtype,someG) \";\"]\"\n            }\n        } else {\n            lappend L_poBenignText($SVtoAnn) \"\"\n            lappend L_poBenignText($SVtoAnn) \"\"\n        }\n    }\n    \n    if {[info exist L_poBenignText($SVtoAnn)]} {\n        set poBenignText($SVtoAnn) [join $L_poBenignText($SVtoAnn) \"\\t\"]\n    } else {\n        set poBenignText($SVtoAnn) \"\"\n    }\n    \n    return $poBenignText($SVchrom,$SVstart,$SVend)\n}\n\n"
  },
  {
    "path": "share/tcl/AnnotSV/AnnotSV-candidategenes.tcl",
    "content": "############################################################################################################\n# AnnotSV 3.5.8                                                                                            #\n#                                                                                                          #\n# AnnotSV: An integrated tool for Structural Variations annotation and ranking                             #\n#                                                                                                          #\n# Copyright (C) 2017-present Veronique Geoffroy (veronique.geoffroy@inserm.fr)                             #\n#                                                                                                          #\n# This is part of AnnotSV source code.                                                                     #\n#                                                                                                          #\n# This program is free software; you can redistribute it and/or                                            #\n# modify it under the terms of the GNU General Public License                                              #\n# as published by the Free Software Foundation; either version 3                                           #\n# of the License, or (at your option) any later version.                                                   #\n#                                                                                                          #\n# This program is distributed in the hope that it will be useful,                                          #\n# but WITHOUT ANY WARRANTY; without even the implied warranty of                                           #\n# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the                                            #\n# GNU General Public License for more details.                                                             #\n#                                                                                                          #\n# You should have received a copy of the GNU General Public License                                        #\n# along with this program; If not, see <http://www.gnu.org/licenses/>.                                     #\n############################################################################################################\n\nproc isCandidate {gene} {\n    global g_AnnotSV\n    global g_candidate\n    \n    if {![info exists g_candidate(DONE)]} {\n        set g_candidate(DONE) 1\n        \n        # List of the candidate genes (given by the user)\n        set L_Candidates \"\"\n        if {$g_AnnotSV(candidateGenesFile) ne \"\"} {\n            set f [open $g_AnnotSV(candidateGenesFile)]\n            while {![eof $f]} {\n                set L [gets $f]\n                lappend L_Candidates {*}[split $L \" |\\n|\\t\"]\n            }\n            close $f\n        }\n        foreach g $L_Candidates {\n            set g_candidate($g) 1\n        }\n    }\n    \n    if {[info exists g_candidate($gene)]} {\n        return 1\n    } else {\n        return 0\n    }\n}\n\n"
  },
  {
    "path": "share/tcl/AnnotSV/AnnotSV-clingen.tcl",
    "content": "############################################################################################################\n# AnnotSV 3.5.8                                                                                            #\n#                                                                                                          #\n# AnnotSV: An integrated tool for Structural Variations annotation and ranking                             #\n#                                                                                                          #\n# Copyright (C) 2017-present Veronique Geoffroy (veronique.geoffroy@inserm.fr)                             #\n#                                                                                                          #\n# This is part of AnnotSV source code.                                                                     #\n#                                                                                                          #\n# This program is free software; you can redistribute it and/or                                            #\n# modify it under the terms of the GNU General Public License                                              #\n# as published by the Free Software Foundation; either version 3                                           #\n# of the License, or (at your option) any later version.                                                   #\n#                                                                                                          #\n# This program is distributed in the hope that it will be useful,                                          #\n# but WITHOUT ANY WARRANTY; without even the implied warranty of                                           #\n# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the                                            #\n# GNU General Public License for more details.                                                             #\n#                                                                                                          #\n# You should have received a copy of the GNU General Public License                                        #\n# along with this program; If not, see <http://www.gnu.org/licenses/>.                                     #\n############################################################################################################\n\n\n# ClinGenFileDownloaded:\n########################\n# ftp://ftp.clinicalgenome.org/ClinGen_gene_curation_list_GRCh37.tsv\n# Some genes are on chrom X AND chrom Y:\n# CSF2RA  1438    Xp22.33 and Yp11.2      chrX:1387693-1428828    30      Gene associated with autosomal recessive phenotype       0       No evidence available       2021-08-23       MONDO:0012580\n# CSF2RA  1438    Xp22.33 and Yp11.2      chrY:1268814-1325218    30      Gene associated with autosomal recessive phenotype       0       No evidence available       2021-08-23       MONDO:0012580\n# => be carreful to avoid redundancy\n\n\n## - Check if the \"ClinGen_gene_curation_list_GRCh37.tsv\" file exists.\n## - Check and create if necessary the 'date'_ClinGenAnnotations.tsv file.\nproc checkClinGenFile {} {\n    \n    global g_AnnotSV\n    \n    \n    set clingenDir \"$g_AnnotSV(annotationsDir)/Annotations_$g_AnnotSV(organism)/Gene-based/ClinGen\"\n    \n    ## Check if the ClinGen file has been downloaded the formatted\n    ##############################################################\n    set ClinGenFileDownloaded [glob -nocomplain \"$clingenDir/ClinGen_gene_curation_list_*.tsv\"]\n    set ClinGenFileFormattedGzip [glob -nocomplain \"$clingenDir/*_ClinGenAnnotations.tsv.gz\"]\n    \n    if {$ClinGenFileDownloaded eq \"\" && $ClinGenFileFormattedGzip eq \"\"} {\n        # No ClinGene annotation\n        return\n    }\n    \n    if {[llength $ClinGenFileFormattedGzip]>1} {\n        puts \"Several ClinGen files exist:\"\n        puts \"$ClinGenFileFormattedGzip\"\n        puts \"Keep only one: [lindex $ClinGenFileFormattedGzip end]\\n\"\n        foreach ClinGenF [lrange $ClinGenFileFormattedGzip 0 end-1] {\n            file rename -force $ClinGenF $ClinGenF.notused\n        }\n        return\n    }\n    if {$ClinGenFileFormattedGzip eq \"\"} {\n        ## - Create the 'date'_ClinGenAnnotations.tsv file.\n        ##   Header: genes, HI and TS\n        \n        set ClinGenFileFormatted \"$clingenDir/[clock format [clock seconds] -format \"%Y%m%d\"]_ClinGenAnnotations.tsv\"\n        puts \"...creation of $ClinGenFileFormatted.gz ([clock format [clock seconds] -format \"%B %d %Y - %H:%M\"])\\n\"\n        ReplaceTextInFile \"genes\\tHI\\tTS\" $ClinGenFileFormatted\n        \n        # Parsing of $ClinGenFileDownloaded\n        foreach L [LinesFromFile $ClinGenFileDownloaded] {\n            set Ls [split $L \"\\t\"]\n            \n            if {[regexp \"^#Gene Symbol\" $L]} {\n                set i_gene [lsearch -exact $Ls \"#Gene Symbol\"];             if {$i_gene == -1} {puts \"Bad header line syntax. Gene Symbol column not found - Exit with error\"; exit 2}\n                set i_HI   [lsearch -exact $Ls \"Haploinsufficiency Score\"]; if {$i_HI == -1} {puts \"Bad header line syntax. Haploinsufficiency Score column not found - Exit with error\"; exit 2}\n                set i_TS   [lsearch -exact $Ls \"Triplosensitivity Score\"];  if {$i_TS == -1} {puts \"Bad header line syntax. Triplosensitivity Score column not found - Exit with error\"; exit 2}\n                continue\n            }\n            if {[regexp \"^#\" $L]} {continue}\n            \n            set gene [lindex $Ls $i_gene]\n            set HI [lindex $Ls $i_HI]\n            set TS [lindex $Ls $i_TS]\n            \n            # To avoir redundancy for genes (CSF2RA and VAMP7) presents on chrom X AND chrom Y\n            if {[info exists seen($gene)]} {continue}\n            set seen($gene) 1\n            \n            if {$HI eq \"Not yet evaluated\"} {set HI \"\"}\n            if {$TS eq \"Not yet evaluated\"} {set TS \"\"}\n            \n            lappend L_Texte \"$gene\\t$HI\\t$TS\"\n        }\n        \n        # creation of $ClinGenFileFormatted.gz\n        WriteTextInFile \"[join $L_Texte \"\\n\"]\" $ClinGenFileFormatted\n        if {[catch {exec gzip $ClinGenFileFormatted} Message]} {\n            puts \"-- checkClinGenFile --\"\n            puts \"gzip $ClinGenFileFormatted\"\n            puts \"$Message\\n\"\n        }\n        \n        file delete -force $ClinGenFileDownloaded\n    }\n}\n\n"
  },
  {
    "path": "share/tcl/AnnotSV/AnnotSV-closestgenes.tcl",
    "content": "############################################################################################################\n# AnnotSV 3.5.8                                                                                            #\n#                                                                                                          #\n# AnnotSV: An integrated tool for Structural Variations annotation and ranking                             #\n#                                                                                                          #\n# Copyright (C) 2017-present Veronique Geoffroy (veronique.geoffroy@inserm.fr)                             #\n#                                                                                                          #\n# This is part of AnnotSV source code.                                                                     #\n#                                                                                                          #\n# This program is free software; you can redistribute it and/or                                            #\n# modify it under the terms of the GNU General Public License                                              #\n# as published by the Free Software Foundation; either version 3                                           #\n# of the License, or (at your option) any later version.                                                   #\n#                                                                                                          #\n# This program is distributed in the hope that it will be useful,                                          #\n# but WITHOUT ANY WARRANTY; without even the implied warranty of                                           #\n# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the                                            #\n# GNU General Public License for more details.                                                             #\n#                                                                                                          #\n# You should have received a copy of the GNU General Public License                                        #\n# along with this program; If not, see <http://www.gnu.org/licenses/>.                                     #\n############################################################################################################\n\n\n\nproc closestGenesAnnotation {BreakpointChrom BreakpointPos Side} {\n    \n    global g_AnnotSV\n    global g_closestGenesLeft\n    global g_closestGenesRight\n    \n    \n    \n    if {![info exists g_closestGenesLeft(DONE)]} {\n        \n        # Creation of \"$tmpCLosestLeftFile\" with:\n        #   SV Left coordinates: \"start-5000000bp\" \"start\"\n        #   => To find the closest left gene\n        #\n        # Creation of \"$tmpCLosestRightFile\" with:\n        #   SV Right coordinates: \"end\" \"end+5000000bp\"\n        #   => To find the closest right gene\n        \n        regsub -nocase \"(.formatted)?.bed$\" $g_AnnotSV(bedFile) \".closestLeft.bed\" tmpCLosestLeftFile\n        regsub -nocase \"(.formatted)?.bed$\" $g_AnnotSV(bedFile) \".closestRight.bed\" tmpCLosestRightFile\n        \n        set tmpCLosestLeftFile  \"$g_AnnotSV(outputDir)/[file tail $tmpCLosestLeftFile]\"\n        set tmpCLosestRightFile \"$g_AnnotSV(outputDir)/[file tail $tmpCLosestRightFile]\"\n        \n        file delete -force $tmpCLosestLeftFile.tmp\n        file delete -force $tmpCLosestRightFile.tmp\n        \n        set i 0\n        set L_LinesToWriteLeft {}\n        set L_LinesToWriteRight {}\n        set f [open $g_AnnotSV(bedFile)]\n        while {![eof $f]} {\n            set L [gets $f]\n            if {$L eq \"\"} {continue}\n            set Ls [split $L \"\\t\"]\n            set chrom [lindex $Ls 0]\n            set start [lindex $Ls 1]\n            set end [lindex $Ls 2]\n            set start_left [expr $start-5000000]; if {$start_left < 0} {set start_left 0}\n            set end_right [expr $end+5000000]\n            lappend L_LinesToWriteLeft \"$chrom\\t$start_left\\t$start\"\n            lappend L_LinesToWriteRight \"$chrom\\t$end\\t$end_right\"\n            incr i\n            if {$i>100000} {\n                WriteTextInFile [join [lsort -unique $L_LinesToWriteLeft] \"\\n\"] $tmpCLosestLeftFile.tmp\n                WriteTextInFile [join [lsort -unique $L_LinesToWriteRight] \"\\n\"] $tmpCLosestRightFile.tmp\n                set L_LinesToWriteLeft {}\n                set L_LinesToWriteRight {}\n                set i 0\n            }\n        }\n        close $f\n        WriteTextInFile [join [lsort -unique $L_LinesToWriteLeft] \"\\n\"] $tmpCLosestLeftFile.tmp\n        WriteTextInFile [join [lsort -unique $L_LinesToWriteRight] \"\\n\"] $tmpCLosestRightFile.tmp\n        \n        unset L_LinesToWriteLeft\n        unset L_LinesToWriteRight\n        \n        # Right sorting: $tmpCLosestLeftFile.tmp => ($bashTmpFileLeft) => $tmpCLosestLeftFile\n        #\n        # Intersection with very large files can cause trouble with excessive memory usage.\n        # A presort of the bed files by chromosome and then by start position combined with the use of the -sorted option will invoke a memory-efficient algorithm.\n        set bashTmpFileLeft \"$g_AnnotSV(outputDir)/[clock format [clock seconds] -format \"%Y%m%d-%H%M%S\"]_[pid]_sort.left.tmp.bash\"\n        ReplaceTextInFile \"#!/bin/bash\" $bashTmpFileLeft\n        WriteTextInFile \"# The locale specified by the environment can affects the traditional sort order. We need to use native byte values.\" $bashTmpFileLeft\n        WriteTextInFile \"export LC_ALL=C\" $bashTmpFileLeft\n        WriteTextInFile \"sort -k1,1 -k2,2n $tmpCLosestLeftFile.tmp > $tmpCLosestLeftFile\" $bashTmpFileLeft\n        file attributes $bashTmpFileLeft -permissions 0755\n        if {[catch {eval exec bash $bashTmpFileLeft} Message]} {\n            puts \"-- closestGenesAnnotation, left sort --\"\n            puts \"sort -k1,1 -k2,2n $tmpCLosestLeftFile.tmp > $tmpCLosestLeftFile\"\n            puts \"$Message\"\n            puts \"Exit with error\"\n            exit 2\n        }\n        file delete -force $bashTmpFileLeft\n        file delete -force $tmpCLosestLeftFile.tmp\n        \n        # Right sorting: $tmpCLosestRightFile.tmp => ($bashTmpFileRight) => $tmpCLosestRightFile\n        set bashTmpFileRight \"$g_AnnotSV(outputDir)/[clock format [clock seconds] -format \"%Y%m%d-%H%M%S\"]_[pid]_sort.left.tmp.bash\"\n        ReplaceTextInFile \"#!/bin/bash\" $bashTmpFileRight\n        WriteTextInFile \"# The locale specified by the environment can affects the traditional sort order. We need to use native byte values.\" $bashTmpFileRight\n        WriteTextInFile \"export LC_ALL=C\" $bashTmpFileRight\n        WriteTextInFile \"sort -k1,1 -k2,2n $tmpCLosestRightFile.tmp > $tmpCLosestRightFile\" $bashTmpFileRight\n        file attributes $bashTmpFileRight -permissions 0755\n        if {[catch {eval exec bash $bashTmpFileRight} Message]} {\n            puts \"-- closestGenesAnnotation, right sort --\"\n            puts \"sort -k1,1 -k2,2n $tmpCLosestRightFile.tmp > $tmpCLosestRightFile\"\n            puts \"$Message\"\n            puts \"Exit with error\"\n            exit 2\n        }\n        file delete -force $bashTmpFileRight\n        file delete -force $tmpCLosestRightFile.tmp\n        \n        \n        # RefSeq or ENSEMBL gene file\n        set genesDir \"$g_AnnotSV(annotationsDir)/Annotations_$g_AnnotSV(organism)/Genes/$g_AnnotSV(genomeBuild)\"\n        set GenesFileFormatted $genesDir/genes.$g_AnnotSV(tx).sorted.bed\n        \n        # Intersect Left\n        regsub -nocase \"(.formatted)?.bed$\" $g_AnnotSV(bedFile) \".intersect.closestGenesLeft.bed\" tmpIntersectGeneFileLeft\n        set tmpIntersectGeneFileLeft \"$g_AnnotSV(outputDir)/[file tail $tmpIntersectGeneFileLeft]\"\n        file delete -force $tmpIntersectGeneFileLeft\n        if {[catch {exec $g_AnnotSV(bedtools) intersect -sorted -a $tmpCLosestLeftFile -b $GenesFileFormatted -wa -wb > $tmpIntersectGeneFileLeft} Message]} {\n            if {[catch {exec $g_AnnotSV(bedtools) intersect -a $tmpCLosestLeftFile -b $GenesFileFormatted -wa -wb > $tmpIntersectGeneFileLeft} Message]} {\n                puts \"-- closestGenesAnnotation, left intersect --\"\n                puts \"$g_AnnotSV(bedtools) intersect -sorted -a $tmpCLosestLeftFile -b $GenesFileFormatted -wa -wb > $tmpIntersectGeneFileLeft\"\n                puts \"$Message\"\n                puts \"Exit with error\"\n                exit 2\n            }\n        }\n        # Intersect Right\n        regsub -nocase \"(.formatted)?.bed$\" $g_AnnotSV(bedFile) \".intersect.closestGenesRight.bed\" tmpIntersectGeneFileRight\n        set tmpIntersectGeneFileRight \"$g_AnnotSV(outputDir)/[file tail $tmpIntersectGeneFileRight]\"\n        file delete -force $tmpIntersectGeneFileRight\n        if {[catch {exec $g_AnnotSV(bedtools) intersect -sorted -a $tmpCLosestRightFile -b $GenesFileFormatted -wa -wb > $tmpIntersectGeneFileRight} Message]} {\n            if {[catch {exec $g_AnnotSV(bedtools) intersect -a $tmpCLosestRightFile -b $GenesFileFormatted -wa -wb > $tmpIntersectGeneFileRight} Message]} {\n                puts \"-- closestGenesAnnotation, right intersect --\"\n                puts \"$g_AnnotSV(bedtools) intersect -sorted -a $tmpCLosestRightFile -b $GenesFileFormatted -wa -wb > $tmpIntersectGeneFileRight\"\n                puts \"$Message\"\n                puts \"Exit with error\"\n                exit 2\n            }\n        }\n        \n        # Loading g_closestGenesLeft($chrom,$pos)\n        set f [open $tmpIntersectGeneFileLeft]\n        while {![eof $f]} {\n            set L [gets $f]\n            if {$L eq \"\"} {continue}\n            set Ls [split $L \"\\t\"]\n            \n            # SV Left coordinates: \"chrom\" \"start-5000000bp\" \"start\"\n            set chrom [lindex $Ls 0]\n            set pos [lindex $Ls 2]\n            \n            if {![info exists g_closestGenesLeft($chrom,$pos)]} {\n                lappend g_closestGenesLeft($chrom,$pos) [lindex $Ls 7]\n            } else {\n                if {[lsearch -exact $g_closestGenesLeft($chrom,$pos) [lindex $Ls 7]] eq -1} {\n                    lappend g_closestGenesLeft($chrom,$pos) [lindex $Ls 7]\n                }\n            }\n        }\n        file delete -force $tmpIntersectGeneFileLeft\n        \n        # Loading g_closestGenesRight($chrom,$pos)\n        set f [open $tmpIntersectGeneFileRight]\n        while {![eof $f]} {\n            set L [gets $f]\n            if {$L eq \"\"} {continue}\n            set Ls [split $L \"\\t\"]\n            \n            # SV Right coordinates: \"chrom\" \"end\" \"end+5000000bp\"\n            set chrom [lindex $Ls 0]\n            set pos [lindex $Ls 1]\n            \n            if {![info exists g_closestGenesRight($chrom,$pos)]} {\n                lappend g_closestGenesRight($chrom,$pos) [lindex $Ls 7]\n            } else {\n                if {[lsearch -exact $g_closestGenesRight($chrom,$pos) [lindex $Ls 7]] eq -1} {\n                    lappend g_closestGenesRight($chrom,$pos) [lindex $Ls 7]\n                }\n            }\n        }\n        file delete -force $tmpIntersectGeneFileRight\n        \n        \n        # Memorisation done\n        set g_closestGenesLeft(DONE) 1\n        \n        # Clean\n        file delete -force $tmpCLosestLeftFile\n        file delete -force $tmpCLosestRightFile\n        \n    }\n    \n    if {$Side eq \"left\"} {\n        if {[info exist g_closestGenesLeft($BreakpointChrom,$BreakpointPos)]} {\n            return \"$g_closestGenesLeft($BreakpointChrom,$BreakpointPos)\"\n        } else {\n            return \"\"\n        }\n    } elseif {$Side eq \"right\"} {\n        if {[info exist g_closestGenesRight($BreakpointChrom,$BreakpointPos)]} {\n            return \"$g_closestGenesRight($BreakpointChrom,$BreakpointPos)\"\n        } else {\n            return \"\"\n        }\n    } else {\n        return \"\"\n    }\n}\n\n"
  },
  {
    "path": "share/tcl/AnnotSV/AnnotSV-config.tcl",
    "content": "############################################################################################################\n# AnnotSV 3.5.8                                                                                            #\n#                                                                                                          #\n# AnnotSV: An integrated tool for Structural Variations annotation and ranking                             #\n#                                                                                                          #\n# Copyright (C) 2017-present Veronique Geoffroy (veronique.geoffroy@inserm.fr)                             #\n#                                                                                                          #\n# This is part of AnnotSV source code.                                                                     #\n#                                                                                                          #\n# This program is free software; you can redistribute it and/or                                            #\n# modify it under the terms of the GNU General Public License                                              #\n# as published by the Free Software Foundation; either version 3                                           #\n# of the License, or (at your option) any later version.                                                   #\n#                                                                                                          #\n# This program is distributed in the hope that it will be useful,                                          #\n# but WITHOUT ANY WARRANTY; without even the implied warranty of                                           #\n# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the                                            #\n# GNU General Public License for more details.                                                             #\n#                                                                                                          #\n# You should have received a copy of the GNU General Public License                                        #\n# along with this program; If not, see <http://www.gnu.org/licenses/>.                                     #\n############################################################################################################\n\n\n## Loading the different options in the following order:\n## - Default options\n## - Config file options (if file exists)\n## - Options given in arguments\n#\n## Please note: the case in the name of options is not important. Ex: \"snvIndelFiles\" = \"snvindelfiles\"\n##\nproc configureAnnotSV {argv} {\n    \n    global g_AnnotSV\n    global g_rankingCriteria\n    \n    puts \"...downloading the configuration data ([clock format [clock seconds] -format \"%B %d %Y - %H:%M\"])\"\n    \n    #######################\n    ## Load default options\n    #######################\n    puts \"\\t...configuration data by default\"\n    set g_AnnotSV(annotationsDir)           \"\"\n    set g_AnnotSV(annotationMode)           \"both\"\n    set g_AnnotSV(bcftools)                 \"bcftools\"\n    set g_AnnotSV(bedtools)                 \"bedtools\"\n    set g_AnnotSV(benignAF)                 \"0.01\"\n    set g_AnnotSV(bracketedAltMaxSize)      \"10\"\n    set g_AnnotSV(bracketedAltMode)         \"ALL\"\n    set g_AnnotSV(breakpointProximity)      \"100\"\n    set g_AnnotSV(candidateGenesFile)       \"\"\n    set g_AnnotSV(candidateGenesFiltering)  \"0\"\n    set g_AnnotSV(candidateSnvIndelFiles)   \"\"\n    set g_AnnotSV(candidateSnvIndelSamples) \"\"\n    set g_AnnotSV(extann)                   \"\"    ;# list of the “.../Annotations_$g_AnnotSV(organism)/*/*.tsv(.gz) files” <=> External gene annotation files\n    set g_AnnotSV(externalGeneFiles)        \"\"\n    set g_AnnotSV(genomeBuild)              \"GRCh38\"\n    set g_AnnotSV(hpo)                      \"\"    ;# \"HP:0030684,HP:0085622\"\n    set g_AnnotSV(includeCI)                \"1\"\n    set g_AnnotSV(metrics)                  \"us\"\n    set g_AnnotSV(minTotalNumber)           \"500\"\n    set g_AnnotSV(missingGTinSamplesid)     \"1\"\n    set g_AnnotSV(outputColHeader)          \"\"    ;# not given in parameter\n    set g_AnnotSV(outputDir)                \"\"\n    set g_AnnotSV(outputFile)               \"\"\n    set g_AnnotSV(overlap)                  \"100\"\n    set g_AnnotSV(overwrite)                \"1\"\n    set g_AnnotSV(promoterSize)             \"500\"\n    set g_AnnotSV(rankFiltering)            \"1-5,NA\"\n    set g_AnnotSV(ranking)                  \"1\"   ;# not given in parameter\n    set g_AnnotSV(reciprocal)               \"0\"\n    set g_AnnotSV(REreport)                 \"0\"\n    set g_AnnotSV(REselect1)                \"1\"\n    set g_AnnotSV(REselect2)                \"1\"\n    set g_AnnotSV(samplesidBEDcol)          \"-1\"\n    set g_AnnotSV(samplesidTSVcol)          \"-1\"  ;# not given in parameter\n    set g_AnnotSV(snvIndelFiles)            \"\"\n    set g_AnnotSV(snvIndelPASS)             \"0\"\n    set g_AnnotSV(snvIndelSamples)          \"\"\n    set g_AnnotSV(SVinputFile)              \"\"\n    set g_AnnotSV(SVinputInfo)              \"1\"\n    set g_AnnotSV(SVminSize)                \"50\"\n    set g_AnnotSV(svtBEDcol)                \"-1\"\n    set g_AnnotSV(svtTSVcol)                \"-1\"  ;# not given in parameter\n    set g_AnnotSV(tx)                       \"RefSeq\"\n    set g_AnnotSV(txFile)                   \"\"\n    set g_AnnotSV(variantconvertDir)        \"\"\n    set g_AnnotSV(variantconvertMode)       \"combined\"\n    set g_AnnotSV(vcf)                      \"0\"\n    \n    set g_rankingCriteria(1A_Loss)         0.00\n    set g_rankingCriteria(1B_Loss)        -0.60\n    set g_rankingCriteria(2A_Loss)         1.00\n    set g_rankingCriteria(2B_Loss)         0.00\n    set g_rankingCriteria(2C-1_Loss)       0.90\n    set g_rankingCriteria(2C-2_Loss)       0.00\n    set g_rankingCriteria(2D-1_Loss)       0.00\n    set g_rankingCriteria(2D-2_Loss)       0.90\n    set g_rankingCriteria(2D-3_Loss)       0.45\n    set g_rankingCriteria(2D-4_Loss)       0.90\n    set g_rankingCriteria(2E-1_Loss)       0.90\n    set g_rankingCriteria(2E-2_Loss)       0.45\n    set g_rankingCriteria(2E-3_Loss)       0.30\n    set g_rankingCriteria(2E-4_Loss)       0.20\n    set g_rankingCriteria(2F-4O_Loss)     -1.00\n    set g_rankingCriteria(2G_Loss)         0.00\n    set g_rankingCriteria(2H_Loss)         0.15\n    set g_rankingCriteria(3A_Loss)         0.00\n    set g_rankingCriteria(3B_Loss)         0.45\n    set g_rankingCriteria(3C_Loss)         0.90\n    set g_rankingCriteria(4O_Loss)        -1.00\n    set g_rankingCriteria(5F_Loss)         0.00\n    set g_rankingCriteria(5G_Loss)         0.10\n    set g_rankingCriteria(5H_Loss)         0.30\n    \n    set g_rankingCriteria(1A_Gain)         0.00\n    set g_rankingCriteria(1B_Gain)        -0.60\n    set g_rankingCriteria(2A_Gain)         1.00\n    set g_rankingCriteria(2B_Gain)         0.00\n    set g_rankingCriteria(2C_Gain)        -1.00\n    set g_rankingCriteria(2D_Gain)        -1.00\n    set g_rankingCriteria(2E_Gain)         0.00\n    set g_rankingCriteria(2F_Gain)        -1.00\n    set g_rankingCriteria(2G_Gain)         0.00\n    set g_rankingCriteria(2H-1_Gain)       0.45\n    set g_rankingCriteria(2H-2_Gain)       0.00\n    set g_rankingCriteria(2I-1_Gain)       0.45\n    set g_rankingCriteria(2I-2_Gain)       0.45\n    set g_rankingCriteria(2I-3_Gain)       0.00\n    set g_rankingCriteria(2J_Gain)         0.00\n    set g_rankingCriteria(2K_Gain)         0.45\n    set g_rankingCriteria(2L_Gain)         0.00\n    set g_rankingCriteria(3A_Gain)         0.00\n    set g_rankingCriteria(3B_Gain)         0.45\n    set g_rankingCriteria(3C_Gain)         0.90\n    set g_rankingCriteria(4O_Gain)         0.00\n    set g_rankingCriteria(5F_Gain)         0.00\n    set g_rankingCriteria(5G_Gain)         0.10\n    set g_rankingCriteria(5H_Gain)         0.15\n    \n    ###########################\n    ## Load config file options\n    ###########################\n    set lOptionsOk \"annotationsDir annotationMode bcftools bedtools benignAF bracketedAltMaxSize bracketedAltMode breakpointProximity candidateGenesFile candidateGenesFiltering candidateSnvIndelFiles candidateSnvIndelSamples extann externalGeneFiles genomeBuild hpo includeCI metrics minTotalNumber missingGTinSamplesid outputDir outputFile overlap overwrite promoterSize rankFiltering reciprocal REreport REselect1 REselect2 samplesidBEDcol snvIndelFiles snvIndelPASS snvIndelSamples SVinputFile SVinputInfo SVminSize svtBEDcol tx txFile variantconvertDir variantconvertMode vcf\"\n    \n    # Setting of $g_AnnotSV(SVinputFile) from the command line\n    set i 0\n    set j 1\n    while {$j < [llength $argv]} {\n        set optionName [lindex $argv $i]\n        regsub \"^-|:\\[ \\t\\]\" $optionName \"\" optionName\n        if {$optionName eq \"SVinputFile\"} {\n            set g_AnnotSV(SVinputFile) [lindex $argv $j]\n        }\n        incr i 2\n        incr j 2\n    }\n    \n    set configFile \"$g_AnnotSV(etcDir)/configfile\"\n    if {[file exists \"[file dirname $g_AnnotSV(SVinputFile)]/configfile\"]} {\n        set configFile \"[file dirname $g_AnnotSV(SVinputFile)]/configfile\"\n    }\n    puts \"\\t...configuration data from $configFile\"\n    set testColumnNames 0\n    foreach L [LinesFromFile $configFile] {\n        if {[regexp \"^# AnnotSV Output columns:\" $L]} {set testColumnNames 1}\n        if {[regexp \"^# AnnotSV ranking criteria:\" $L]} {set testColumnNames 2}\n        if {[regexp \"^#\" $L]} {continue}\n        if {$L eq \"\"} {continue}\n        if { ! $testColumnNames} {\n            # Reading the configfile options (not the column names)\n            regsub -all \"^-|:\\[ \\t\\]\" $L \"\" L\n            set optionName  [lindex $L 0]\n            set optionValue [lindex $L 1]\n            set k [lsearch -exact -nocase $lOptionsOk $optionName]\n            if {$k != -1} {\n                set optionName [lindex $lOptionsOk $k]\n                set g_AnnotSV($optionName) $optionValue\n            } else {\n                puts \"############################################################################\"\n                puts \"\\\"$optionName\\\" option not known.\"\n                puts \"For more information on the arguments, please use the -help option\"\n                puts \"####################################\n                ########################################\"\n                exit 2\n            }\n        } elseif {$testColumnNames eq 1} {\n            # Reading the configfile column names (not the options)\n            # - Users can select only a subset of the annotation columns provided by AnnotSV\n            # - Essential annotations are added below (at the end of the proc)\n            regsub \"( |\\t|\\\\*)+$\" $L \"\" L\n            lappend g_AnnotSV(outputColHeader) $L\n        } elseif {$testColumnNames eq 2} {\n            # Reading the weights for the ranking criteria\n            set g_rankingCriteria([lindex $L 0]) [lindex $L 1]\n        }\n    }\n    \n    ##################################\n    ## Load options given in arguments\n    ##################################\n    puts \"\\t...configuration data given in arguments\"\n    set i 0\n    set j 1\n    while {$j < [llength $argv]} {\n        set optionName [lindex $argv $i]\n        regsub \"^-|:\\[ \\t\\]\" $optionName \"\" optionName\n        set optionValue [lindex $argv $j]\n        set  k [lsearch -exact -nocase $lOptionsOk $optionName]\n        if {$k != -1} {\n            set optionName [lindex $lOptionsOk $k]\n            set g_AnnotSV($optionName) $optionValue\n        } else {\n            puts \"\\\"$optionName\\\" option not known.\"\n            puts \"For more information on the arguments, please use the -help option\"\n            exit 2\n        }\n        \n        incr i 2\n        incr j 2\n    }\n    \n    ########################################\n    ## Checking of the configuration options\n    ########################################\n    puts \"\\t...checking all these configuration data\\n\"\n    \n    ## annotationsDir, variantconvertDir: It must be existing directories (or \"\" for the default)\n    if {$g_AnnotSV(annotationsDir) eq \"\"} {\n        set g_AnnotSV(annotationsDir) \"$g_AnnotSV(installDir)/share/AnnotSV\"\n    } else {\n        regsub \"/+$\" $g_AnnotSV(annotationsDir) \"\" g_AnnotSV(annotationsDir)\n        if {![file isdirectory $g_AnnotSV(annotationsDir)]} {\n            puts \"AnnotSV needs in argument an existing path of the annotations directory (-annotationsDir = \\\"$g_AnnotSV(annotationsDir)\\\") - Exit with error.\"\n            exit 2\n        }\n    }\n    regsub -all {/+} $g_AnnotSV(annotationsDir) {/} g_AnnotSV(annotationsDir)\n    if {$g_AnnotSV(variantconvertDir) eq \"\"} {\n        set g_AnnotSV(variantconvertDir) \"$g_AnnotSV(installDir)/share/python3/variantconvert/\"\n    } else {\n        regsub \"/+$\" $g_AnnotSV(variantconvertDir) \"\" g_AnnotSV(variantconvertDir)\n        if {![file isdirectory $g_AnnotSV(variantconvertDir)]} {\n            puts \"AnnotSV needs in argument an existing path of the variantconvert directory (-variantconvertDir = \\\"$g_AnnotSV(variantconvertDir)\\\") - Exit with error.\"\n            exit 2\n        }\n    }\n    regsub -all {/+} $g_AnnotSV(variantconvertDir) {/} g_AnnotSV(variantconvertDir)\n    \n    ## SVinputFile: We should have a bed or VCF input file\n    if {$g_AnnotSV(SVinputFile) eq \"\"} {\n        puts \"AnnotSV needs in argument the path of your bed or VCF input file (-SVinputFile ...) - Exit with error.\"\n        exit 2\n    }\n    if {![regexp -nocase \"\\\\.(bed|vcf(.gz)?)$\" $g_AnnotSV(SVinputFile)]} {\n        puts \"############################################################################\"\n        puts \"Bad option value: -SVinputFile = $g_AnnotSV(SVinputFile)\"\n        puts \"Extension file should be \\\".bed\\\" or \\\".vcf\\\" - Exit with error.\"\n        puts \"############################################################################\"\n        exit 2\n    }\n    ## SVinputFile: It must be an existing file\n    if {![file exists $g_AnnotSV(SVinputFile)]} {\n        puts \"############################################################################\"\n        puts \"Bad value for the SVinputFile option, file does not exist ($g_AnnotSV(SVinputFile)) - Exit with error.\"\n        puts \"############################################################################\"\n        exit 2\n    }\n    ## SVinputFile: no SV to annotate if it is an empty file\n    ## (could happen if AnnotSV is implemented into a pipeline)\n    if {[isAnEmptyFile $g_AnnotSV(SVinputFile)]} {\n        puts \"############################################################################\"\n        puts \"SVinputFile ($g_AnnotSV(SVinputFile) is empty, no SV to annotate - Exit without error.\"\n        puts \"############################################################################\"\n        exit 0\n    }\n    \n    ## bracketedAltMaxSize: positive float\n    if {![string is double $g_AnnotSV(bracketedAltMaxSize)] || $g_AnnotSV(bracketedAltMaxSize) < 0 } {\n        puts \"############################################################################\"\n        puts \"Bad option value: -bracketedAltMaxSize = $g_AnnotSV(bracketedAltMaxSize)\"\n        puts \"Should be a positive float, default = 10\"\n        puts \"############################################################################\"\n        exit 2\n    }\n    \n    ## benignAF: [0.001-0.1], default = 0.01\n    if {![string is double $g_AnnotSV(benignAF)] || $g_AnnotSV(benignAF) < 0.001 || $g_AnnotSV(benignAF) > 0.1} {\n        puts \"############################################################################\"\n        puts \"Bad option value: -benignAF = $g_AnnotSV(benignAF)\"\n        puts \"Should be in the \\[0.001-0.1\\] range values, default = 0.01\"\n        puts \"############################################################################\"\n        exit 2\n    }\n    \n    ## metrics: us or fr\n    if {$g_AnnotSV(metrics) ne \"us\" && $g_AnnotSV(metrics) ne \"fr\"} {\n        puts \"############################################################################\"\n        puts \"Bad option value: -metrics = $g_AnnotSV(metrics)\"\n        puts \"Should be \\\"us\\\" or \\\"fr\\\" - Continue with the \\\"us\\\" default.\"\n        puts \"############################################################################\"\n        set g_AnnotSV(metrics) \"us\"\n    }\n    \n    ## It must be a boolean: 1 or 0\n    foreach val {candidateGenesFiltering includeCI missingGTinSamplesid overwrite reciprocal REreport REselect1 REselect2 SVinputInfo snvIndelPASS vcf} {\n        if {$g_AnnotSV($val) ne \"1\" && $g_AnnotSV($val) ne \"0\"} {\n            puts \"############################################################################\"\n            puts \"Bad option value: -$val = $g_AnnotSV($val)\"\n            puts \"Should be \\\"1\\\" or \\\"0\\\"\"\n            puts \"############################################################################\"\n            exit 2\n        }\n    }\n    \n    # g_AnnotSV(hpo)\n    # It must be a comma, semicolon or space separated class values, default = \"\"\n    # (e.g.: \"HP:0001156,HP:0001363,HP:0011304\")\n    set g_AnnotSV(hpo) [split $g_AnnotSV(hpo) \",|;| \"]\n    set L_correctHPO {}\n    set L_display \"\"\n    foreach hpo $g_AnnotSV(hpo) {\n        if {[regexp \"^HP:\\[0-9\\]+$\" $hpo]} {\n            lappend L_correctHPO $hpo\n        } else {\n            lappend L_display \"Bad format for the HPO term: $hpo. Not used.\"\n        }\n    }\n    if {$L_display ne \"\"} {\n        puts \"############################################################################\"\n        puts \"[join $L_display \"\\n\"]\"\n        puts \"############################################################################\"\n    }\n    set g_AnnotSV(hpo) [join $L_correctHPO \",\"]\n    \n    # g_AnnotSV(rankFiltering)\n    ## It must be a list between 1 and 5 and NA\n    ## e.g.: \"3,4,5\" or \"3-5\"\n    set liste {}\n    while {[regexp \"(\\[1-5\\])-(\\[1-5\\])\" $g_AnnotSV(rankFiltering) match i j]} {\n        while {$i <= $j} {\n            lappend liste $i\n            incr i\n        }\n        regsub \"\\[1-5\\]-\\[1-5\\]\" $g_AnnotSV(rankFiltering) \"\" g_AnnotSV(rankFiltering)\n    }\n    foreach i [split $g_AnnotSV(rankFiltering) \",\"] {\n        if {[lsearch -exact {1 2 3 4 5 NA} $i] ne -1} {lappend liste $i}\n    }\n    set liste [lsort -unique $liste]\n    set g_AnnotSV(rankFiltering) $liste\n    \n    ## g_AnnotSV(outputDir) must be an existing directory. Else, we create it.\n    ## g_AnnotSV(outputFile) must be defined and should not already exists.\n    ## g_AnnotSV(outputFile) extension must be \".tsv\".\n    if {$g_AnnotSV(outputDir) eq \"\" && [regexp \"/\" \"$g_AnnotSV(outputFile)\"]} {\n        # Info: Directory and name file could be both given in the g_AnnotSV(outputFile) option\n        set g_AnnotSV(outputDir) [file dirname \"$g_AnnotSV(outputFile)\"]\n    }\n    if {$g_AnnotSV(outputDir) ne \"\"} {\n        if {![file exists $g_AnnotSV(outputDir)]} {\n            file mkdir \"$g_AnnotSV(outputDir)\"\n        }\n    } else {\n        set g_AnnotSV(outputDir) \"[clock format [clock seconds] -format \"%Y%m%d\"]_AnnotSV\"\n        file mkdir \"$g_AnnotSV(outputDir)\"\n    }\n    regsub \"/+$\" $g_AnnotSV(outputDir) \"\" g_AnnotSV(outputDir)\n    if {$g_AnnotSV(outputFile) ne \"\"} {\n        set g_AnnotSV(outputFile) [file tail $g_AnnotSV(outputFile)]\n        if {[string range $g_AnnotSV(outputFile) end-3 end] ne \".tsv\"} {\n            set g_AnnotSV(outputFile) \"$g_AnnotSV(outputFile).tsv\"\n        }\n    } else {\n        regsub -nocase \"(\\\\.bed|\\\\.vcf(\\\\.gz)?)$\" [file tail $g_AnnotSV(SVinputFile)] \".annotated.tsv\" g_AnnotSV(outputFile)\n    }\n    if {!$g_AnnotSV(overwrite) && [file exists $g_AnnotSV(outputDir)/$g_AnnotSV(outputFile)]} {\n        puts \"############################################################################\"\n        puts \"Bad value for the -outputFile option, file already exists ($g_AnnotSV(outputDir)/$g_AnnotSV(outputFile)) - Exit with error.\"\n        puts \"############################################################################\"\n        exit 2\n    }\n    set g_AnnotSV(outputDir) [file normalize $g_AnnotSV(outputDir)]\n    \n    # bedtools/bcftools: It should be a good path that we can run\n    foreach tool {bedtools bcftools} {\n        if {[catch {eval exec $g_AnnotSV($tool) --version} Message]} {\n            puts \"############################################################################\"\n            puts \"Bad value for the $tool option ($g_AnnotSV($tool))\"\n            puts \"$Message\"\n            puts \"Exit with error.\"\n            puts \"############################################################################\"\n            exit 2\n        } else {\n            # Minimum bedtools version compatible with AnnotSV is version 2.25\n            if {$tool eq \"bedtools\"} {\n                if {[regexp \"(\\[0-9\\]+\\\\.\\[0-9\\]+\\\\.\\[0-9\\]+)\" $Message match bedtoolsVersion]} {\n                    set L_bedtoolsVersion [split $bedtoolsVersion \".\"]\n                    if {[lindex $L_bedtoolsVersion 0] < 2 || ([lindex $L_bedtoolsVersion 0] eq 2 && [lindex $L_bedtoolsVersion 1] < 25)} {\n                        puts \"############################################################################\"\n                        puts \"The minimum bedtools version compatible with AnnotSV is version 2.25.\"\n                        puts \"You are using bedtools version $bedtoolsVersion\"\n                        puts \"Exit with error.\"\n                        puts \"############################################################################\"\n                        exit 2\n                    }\n                }\n            }\n        }\n    }\n    \n    # tx: It must be \"RefSeq\" or \"ENSEMBL\"\n    if {$g_AnnotSV(tx) ne \"RefSeq\" && $g_AnnotSV(tx) ne \"ENSEMBL\"} {\n        puts \"############################################################################\"\n        puts \"Bad option value: -tx = $g_AnnotSV(tx)\"\n        puts \"Should be \\\"RefSeq\\\" or \\\"ENSEMBL\\\"\"\n        puts \"############################################################################\"\n        exit 2\n    }\n    \n    ## txFile: It must be an existing file\n    if {$g_AnnotSV(txFile) ne \"\" && ![file exists $g_AnnotSV(txFile)]} {\n        puts \"############################################################################\"\n        puts \"Bad value for the txFile option, file does not exist ($g_AnnotSV(txFile)) - Exit with error.\"\n        puts \"############################################################################\"\n        exit 2\n    }\n    \n    ## candidateGenesFile, externalGeneFiles: It must be an existing file\n    foreach annfile {candidateGenesFile externalGeneFiles} {\n        if {$g_AnnotSV($annfile) ne \"\" && ![file exists $g_AnnotSV($annfile)]} {\n            puts \"############################################################################\"\n            puts \"Bad value for the $annfile option, file does not exist ([set g_AnnotSV($annfile)]) - Exit with error.\"\n            puts \"############################################################################\"\n            exit 2\n        }\n    }\n    \n    ## It must be an integer comprised between 0 and 100\n    if {[regexp \"\\[^0-9\\]\" $g_AnnotSV(overlap)] || $g_AnnotSV(overlap)<=0 || $g_AnnotSV(overlap)>100} {\n        puts \"############################################################################\"\n        puts \"Bad value for the overlap option ($g_AnnotSV(overlap)), should be an integer ]0,100] - Exit with error.\"\n        puts \"############################################################################\"\n        exit 2\n    }\n    \n    ## It must be an integer comprised between 100 and 1000\n    if {[regexp \"\\[^0-9\\]\" $g_AnnotSV(minTotalNumber)] || $g_AnnotSV(minTotalNumber)<100 || $g_AnnotSV(minTotalNumber)>1000} {\n        puts \"############################################################################\"\n        puts \"Bad value for the $val option ($g_AnnotSV($val)), should be an integer comprised between 100 and 1000 - Exit with error.\"\n        puts \"############################################################################\"\n        exit 2\n    }\n    \n    ## It must be an integer > 0\n    foreach val {breakpointProximity promoterSize SVminSize} {\n        if {[regexp \"\\[^0-9\\]\" $g_AnnotSV($val)]} {\n            puts \"############################################################################\"\n            puts \"Bad value for the $val option ($g_AnnotSV($val)), should be a positive integer - Exit with error.\"\n            puts \"############################################################################\"\n            exit 2\n        }\n    }\n    \n    ## It must be \"both\", \"full\" or \"split\"\n    set L_annotationMode {both full split}\n    if {[lsearch -exact $L_annotationMode \"$g_AnnotSV(annotationMode)\"] eq -1} {\n        puts \"############################################################################\"\n        puts \"Bad option value: -annotationMode = $g_AnnotSV(annotationMode)\"\n        puts \"Should be \\\"both\\\", \\\"full\\\" or \\\"split\\\"\"\n        puts \"############################################################################\"\n        exit 2\n    }\n    \n    ## It must be \"combined\", \"full\" or \"fullsplit\"\n    set L_variantconvertMode {combined full fullsplit}\n    if {[lsearch -exact $L_variantconvertMode \"$g_AnnotSV(variantconvertMode)\"] eq -1} {\n        puts \"############################################################################\"\n        puts \"Bad option value: -variantconvertMode = $g_AnnotSV(variantconvertMode)\"\n        puts \"Should be \\\"combined\\\", \\\"full\\\" or \\\"fullsplit\\\"\"\n        puts \"############################################################################\"\n        exit 2\n    }\n    \n    ## The following step could be improved: too long\n    #################################################\n    set g_AnnotSV(snvIndelSamples) [split $g_AnnotSV(snvIndelSamples)  \";|,\"]\n    ## If \"snvIndelFiles\" option is defined:\n    ## It must be existing files\n    if {$g_AnnotSV(snvIndelFiles) ne \"\"} {\n        # Warning: A file that doesn't exists (or badly defined with a regexp) will not return an error message but will return an empty list:\n        set g_AnnotSV(snvIndelFiles) [eval glob -nocomplain $g_AnnotSV(snvIndelFiles)]\n    }\n    ## After that, if \"snvIndelFiles\" contains at least 1 existing file:\n    if {$g_AnnotSV(snvIndelFiles) ne \"\"} {\n        ## All \"$snvIndelSamples\" should be presents in one of the VCF files\n        ## If the \"-snvIndelSamples\" option is not defined, we defined it with all samples from the \"snvIndelFiles\".\n        set L_correctSamples {}\n        set L_allSamplesFromVCF {}\n        foreach vcfF $g_AnnotSV(snvIndelFiles) {\n            if {[regexp -nocase \".gz$\" $vcfF]} {\n                set f [open \"|gzip -cd $vcfF\"]\n            } else {\n                set f [open \"$vcfF\"]\n            }\n            while {![eof $f]} {\n                set L [gets $f]\n                if {[string range $L 0 5] ne \"#CHROM\"} {continue}\n                set Ls [split $L \"\\t\"]\n                lappend L_allSamplesFromVCF {*}[lrange $Ls 9 end]\n                foreach sample $g_AnnotSV(snvIndelSamples) {\n                    if {[lsearch -exact $Ls $sample] ne -1} {lappend L_correctSamples $sample}\n                }\n                # We can't put a break here, because the pipe command: \"|gzip ...\" still produces data.\n                # break will creates a broken pipe signal:\n                #   child killed: write on pipe with no readers\n                #   while executing \"close $f\"\n            }\n            close $f\n        }\n        if {$g_AnnotSV(snvIndelSamples) eq \"\"} {\n            set L_allSamplesFromVCF [lsort -unique $L_allSamplesFromVCF]\n            set g_AnnotSV(snvIndelSamples) $L_allSamplesFromVCF\n        } else {\n            if {$L_correctSamples ne \"\"} {\n                set L_correctSamples [lsort -unique $L_correctSamples]\n                set g_AnnotSV(snvIndelSamples) $L_correctSamples; # Remove samples from g_AnnotSV(snvIndelSamples) that are not in a VCF file\n            } else {\n                set L_allSamplesFromVCF [lsort -unique $L_allSamplesFromVCF]\n                set g_AnnotSV(snvIndelSamples) $L_allSamplesFromVCF\n            }\n        }\n    } else {\n        set g_AnnotSV(snvIndelSamples) \"\"\n    }\n    \n    \n    set g_AnnotSV(candidateSnvIndelSamples) [split $g_AnnotSV(candidateSnvIndelSamples)  \";|,\"]\n    ## If \"candidateSnvIndelFiles\" option is defined:\n    ## It must be existing files\n    if {$g_AnnotSV(candidateSnvIndelFiles) ne \"\"} {\n        # Warning: A file that doesn't exist (or badly defined with a regexp) will not return an error message but will return an empty list:\n        set g_AnnotSV(candidateSnvIndelFiles) [eval glob -nocomplain $g_AnnotSV(candidateSnvIndelFiles)]\n    }\n    ## After that, if \"candidateSnvIndelFiles\" contains at least 1 existing file:\n    if {$g_AnnotSV(candidateSnvIndelFiles) ne \"\"} {\n        ## All \"$candidateSnvIndelSamples\" should be presents in one of the VCF files\n        ## If the \"-candidateSnvIndelSamples\" option is not defined, we defined it with all samples from the \"candidateSnvIndelFiles\".\n        set L_correctCandidateSamples \"\"\n        set L_allSamplesFromVCF {}\n        foreach vcfF $g_AnnotSV(candidateSnvIndelFiles) {\n            if {[regexp -nocase \".gz$\" $vcfF]} {\n                set f [open \"|gzip -cd $vcfF\"]\n            } else {\n                set f [open \"$vcfF\"]\n            }\n            while {![eof $f]} {\n                set L [gets $f]\n                if {[string range $L 0 5] eq \"#CHROM\"} {\n                    set Ls [split $L \"\\t\"]\n                    lappend L_allSamplesFromVCF {*}[lrange $Ls 9 end]\n                    foreach sample $g_AnnotSV(candidateSnvIndelSamples) {\n                        if {[lsearch -exact $Ls $sample] ne -1} {lappend L_correctCandidateSamples $sample}\n                    }\n                    # We can't put a break here, because the pipe command: \"|gzip ...\" still produces data.\n                    # break will creates a broken pipe signal:\n                    #   child killed: write on pipe with no readers\n                    #   while executing \"close $f\"\n                }\n            }\n            close $f\n        }\n        \n        if {$g_AnnotSV(candidateSnvIndelSamples) eq \"\"} {\n            set L_allSamplesFromVCF [lsort -unique $L_allSamplesFromVCF]\n            set g_AnnotSV(candidateSnvIndelSamples) $L_allSamplesFromVCF\n        } else {\n            if {$L_correctCandidateSamples ne \"\"} {\n                set L_correctCandidateSamples [lsort -unique $L_correctCandidateSamples]\n                set g_AnnotSV(candidateSnvIndelSamples) $L_correctCandidateSamples; # Remove samples from g_AnnotSV(candidateSnvIndelSamples) that are not in a VCF file\n            } else {\n                set L_allSamplesFromVCF [lsort -unique $L_allSamplesFromVCF]\n                set g_AnnotSV(candidateSnvIndelSamples) $L_allSamplesFromVCF\n            }\n        }\n        \n        # Check if the \"candidateSnvIndelFiles\" contains the GT field\n        # (else the g_AnnotSV(candidateSnvIndelSamples) is set to \"\")\n        filteredVCFannotation \"FULL\" \"\" \"\" \"\" \"\"\n        \n    } else {\n        set g_AnnotSV(candidateSnvIndelSamples) \"\"\n    }\n    \n    ## It must be \"ALL, BND, DEL, DUP, INS or INV, \"\n    set L_authorized_values {ALL BND DEL DUP INS INV}\n    regsub -all \" \" $g_AnnotSV(bracketedAltMode) \"\" brackMode\n    set L_bracketedAltMode [split $brackMode \",\"]\n    foreach mode $L_bracketedAltMode {\n        if {![regexp -nocase \"$mode\" $L_authorized_values]} {\n            puts \"############################################################################\"\n            puts \"Bad option value: -bracketedAltMode = $g_AnnotSV(bracketedAltMode)\"\n            puts \"Should be \\\"ALL\\\", \\\"BND\\\", \\\"DEL\\\", \\\"DUP\\\", \\\"INS\\\" or \\\"INV\\\"\"\n            puts \"############################################################################\"\n            exit 2\n        }\n    }\n    \n    ## It must be \"GRCh37\" or \"GRCh38\" or \"CHM13\" or \"mm39\" or \"mm9\" or \"mm10\" for the genomeBuild option.\n    if {![regexp -nocase \"^(GRCh37)|(GRCh38)|(CHM13)|(mm39)|(mm9)|(mm10)$\" $g_AnnotSV(genomeBuild)]} {\n        puts \"############################################################################\"\n        puts \"Bad option value: -genomeBuild = $g_AnnotSV(genomeBuild)\"\n        puts \"Should be \\\"GRCh37\\\", \\\"GRCh38\\\", \\\"CHM13\\\", \\\"mm39\\\", \\\"mm9\\\" or \\\"mm10\\\"\"\n        puts \"############################################################################\"\n        exit 2\n    }\n    # Definition of the $g_AnnotSV(organism) variable\n    if {[regexp -nocase \"^(GRCh37)|(GRCh38)|(CHM13)$\" $g_AnnotSV(genomeBuild)]} {\n        set g_AnnotSV(organism) \"Human\"\n    } elseif {[regexp -nocase \"^(mm39)|(mm9)|(mm10)$\" $g_AnnotSV(genomeBuild)]} {\n        set g_AnnotSV(organism) \"Mouse\"\n    }\n    \n    \n    # Some annotation columns can not be removed by the user:\n    # - Annotations which identify the SV:                     AnnotSV_ID SV_chrom SV_start SV_end SV_length SV_type\n    # - Annotations essential for the ranking:                 Annotation_mode Gene_name Gene_Count Overlapped_CDS_percent Frameshift Location Location2 RE_gene Overlapped_CDS_length Exon_count\n    #                                                          P_gain_coord P_loss_coord P_snvindel_nb B_gain_coord B_loss_coord\n    #                                                          po_P_gain_coord po_P_loss_coord po_B_gain_allG_coord po_B_gain_someG_coord po_B_loss_allG_coord po_B_loss_someG_coord\n    #                                                          HI TS GnomAD_pLI LOEUF_bin DDD_HI_percent PhenoGenius_specificity Exomiser_gene_pheno_score OMIM_morbid\n    # - Annotations essential for variantconvert (VCF output): Samples_ID\n    # - Ranking annotations:                                   AnnotSV_ranking_score AnnotSV_ranking_criteria ACMG_class\n    # - Annotations linked to the previous essential annotations: Tx Tx_start Tx_end Overlapped_tx_length Dist_nearest_SS Nearest_SS_type Intersect_start Intersect_end\n    #   (to be improved with the python reimplementation)         P_gain_phen P_gain_hpo P_gain_source P_loss_phen P_loss_hpo P_loss_source\n    #                                                             po_P_gain_phen po_P_gain_hpo po_P_gain_source po_P_gain_percent po_P_loss_phen po_P_loss_hpo po_P_loss_source po_P_loss_percent\n    #                                                             P_snvindel_phen B_gain_source B_gain_AFmax B_loss_source B_loss_AFmax\n    #                                                             po_B_gain_allG_source po_B_gain_someG_source po_B_gain_someG_coord po_B_loss_allG_source po_B_loss_someG_source\n    set g_AnnotSV(genesBasedAnn) 1\n    foreach col \"SV_chrom SV_start SV_end SV_length SV_type Annotation_mode Gene_name Gene_Count RE_gene P_gain_coord P_loss_coord P_snvindel_nb B_gain_coord B_loss_coord po_P_gain_coord po_P_loss_coord po_B_gain_allG_coord po_B_loss_allG_coord po_B_loss_someG_coord HI TS GnomAD_pLI LOEUF_bin DDD_HI_percent PhenoGenius_specificity Exomiser_gene_pheno_score OMIM_morbid Location Location2 Overlapped_CDS_percent Frameshift Exon_count Samples_ID\" {\n        if {[lsearch -exact \"$g_AnnotSV(outputColHeader)\" $col] eq -1} {\n            lappend g_AnnotSV(outputColHeader) $col\n        }\n    }\n    \n    return\n}\n\nproc createBEDinputHeaderFile {} {\n    \n    global g_AnnotSV\n    global headerFileToRemove\n    global addNAinBED\n    \n    set addNAinBED 0\n    \n    ## SVinputfile is a BED\n    regsub -nocase \".bed$\" $g_AnnotSV(bedFile) \".header.tsv\" BEDinputHeaderFile\n    set BEDinputHeaderFile \"$g_AnnotSV(outputDir)/[file tail $BEDinputHeaderFile]\"\n    \n    ## Creation of the header file\n    set f [open $g_AnnotSV(bedFile)]\n    while {![eof $f]} {\n        set L [gets $f]\n        if {$L eq \"\"} {continue}\n        if {[regexp \"^#\" $L]} {\n            set header $L\n            continue\n        }\n        break\n    }\n    close $f\n    if {[info exists header]} {\n        if {$g_AnnotSV(samplesidBEDcol) == -1} {\n            set i_samplesid [lsearch -exact \"Samples_ID\" [split $header \"\\t\"]]\n            if {$i_samplesid ne -1} {\n                set g_AnnotSV(samplesidBEDcol) [expr {$i_samplesid+1}]\n            } else {\n                append header \"\\tSamples_ID\"\n                set addNAinBED 1\n                set g_AnnotSV(samplesidBEDcol) [llength [split $header \"\\t\"]]\n            }\n        }\n        WriteTextInFile \"$header\" $BEDinputHeaderFile\n        set headerFileToRemove 1\n    } else {\n        set header \"SV_chrom\\tSV_start\\tSV_end\"\n        set theBEDlength [llength [split [FirstLineFromFile $g_AnnotSV(bedFile)] \"\\t\"]]\n        set i 4\n        set k 1\n        while {$i <= $theBEDlength} {\n            if {$i eq $g_AnnotSV(svtBEDcol)} {\n                append header \"\\tSV_type\"\n            } elseif {$i eq $g_AnnotSV(samplesidBEDcol)} {\n                append header \"\\tSamples_ID\"\n            } else {\n                append header \"\\tuser#$k\"; incr k\n            }\n            incr i\n        }\n        \n        if {$g_AnnotSV(samplesidBEDcol) == -1} {\n            append header \"\\tSamples_ID\"\n            set addNAinBED 1\n            set g_AnnotSV(samplesidBEDcol) [expr {$theBEDlength+1}]\n        }\n        WriteTextInFile \"$header\" $BEDinputHeaderFile\n        set headerFileToRemove 1\n    }\n    return\n}\n\nproc addNAinSamplesIDbedCol {} {\n    \n    global g_AnnotSV\n    global addNAinBED\n    \n    ## SVinputfile is a BED, with no samplesid column\n    if {$addNAinBED} {\n        # Add a supplementary column in the BED input file with \"NA\" (corresponding to the sample name)\n        # => needed for variantconvert + to create the SV database (in the future)\n        set L_toWrite {}\n        set i 0\n        set f [open $g_AnnotSV(bedFile)]\n        regsub -nocase \".bed$\" $g_AnnotSV(bedFile) \".NA.bed\" g_AnnotSV(NAbedFile)\n        file delete -force \"$g_AnnotSV(NAbedFile)\"\n        while {![eof $f]} {\n            set L [gets $f]\n            if {$L eq \"\"} {continue}\n            if {[regexp \"^#\" $L]} {continue}\n            set L \"$L\\tNA\"\n            #if {![info exists theNAbedLength]} {set theNAbedLength [llength [split $L \"\\t\"]]}\n            lappend L_toWrite $L\n            incr i\n            if {$i > 100000} {\n                WriteTextInFile [join \"$L_toWrite\" \"\\n\"] $g_AnnotSV(NAbedFile)\n                set L_toWrite {}\n                set i 0\n            }\n        }\n        close $f\n        WriteTextInFile [join \"$L_toWrite\" \"\\n\"] $g_AnnotSV(NAbedFile)\n        \n        regsub -nocase \".bed$\" $g_AnnotSV(bedFile) \".header.tsv\" BEDinputHeaderFile\n        set BEDinputHeaderFile \"$g_AnnotSV(outputDir)/[file tail $BEDinputHeaderFile]\"\n        regsub -nocase \".bed$\" $g_AnnotSV(bedFile) \".NA.header.tsv\" NAbedinputHeaderFile\n        set NAbedinputHeaderFile \"$g_AnnotSV(outputDir)/[file tail $NAbedinputHeaderFile]\"\n        file rename -force $BEDinputHeaderFile $NAbedinputHeaderFile\n        \n        set g_AnnotSV(bedFile) $g_AnnotSV(NAbedFile)\n        \n        # Number of the \"Samples_ID\" column in the new \"NA\" BED file (not the informatic count in a list!)\n        # set g_AnnotSV(samplesidBEDcol) \"$theNAbedLength\"\n        \n    }\n}\n\n"
  },
  {
    "path": "share/tcl/AnnotSV/AnnotSV-cosmic.tcl",
    "content": "############################################################################################################\n# AnnotSV 3.5.8                                                                                            #\n#                                                                                                          #\n# AnnotSV: An integrated tool for Structural Variations annotation and ranking                             #\n#                                                                                                          #\n# Copyright (C) 2017-present Veronique Geoffroy (veronique.geoffroy@inserm.fr)                             #\n#                                                                                                          #\n# This is part of AnnotSV source code.                                                                     #\n#                                                                                                          #\n# This program is free software; you can redistribute it and/or                                            #\n# modify it under the terms of the GNU General Public License                                              #\n# as published by the Free Software Foundation; either version 3                                           #\n# of the License, or (at your option) any later version.                                                   #\n#                                                                                                          #\n# This program is distributed in the hope that it will be useful,                                          #\n# but WITHOUT ANY WARRANTY; without even the implied warranty of                                           #\n# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the                                            #\n# GNU General Public License for more details.                                                             #\n#                                                                                                          #\n# You should have received a copy of the GNU General Public License                                        #\n# along with this program; If not, see <http://www.gnu.org/licenses/>.                                     #\n############################################################################################################\n\n\n## - Check if the \"CosmicCompleteCNA.tsv.gz\" file has been downloaded:\n##   If yes, create the \"CosmicCompleteCNA_$g_AnnotSV(genomeBuild).sorted.bed\" file (in the \"Users\" directory) and delete the previous one.\nproc checkCOSMICfile {} {\n    \n    global g_AnnotSV\n    \n    set extannDir \"$g_AnnotSV(annotationsDir)/Annotations_$g_AnnotSV(organism)\"\n    set COSMICdir \"$extannDir/FtIncludedInSV/COSMIC\"\n    set COSMICfileDownloaded \"$COSMICdir/$g_AnnotSV(genomeBuild)/CosmicCompleteCNA.tsv.gz\"\n    set COSMICfileFormatted \"$extannDir/Users/$g_AnnotSV(genomeBuild)/FtIncludedInSV/CosmicCompleteCNA_$g_AnnotSV(genomeBuild).bed\"\n    \n    if {[file exists $COSMICfileFormatted]} {\n        set g_AnnotSV(COSMICann) 1\n    } elseif {[file exists $COSMICfileDownloaded]} {\n        # Creation of \"CosmicCompleteCNA_$g_AnnotSV(genomeBuild).sorted.bed\"\n        puts \"\\t...COSMIC configuration ([clock format [clock seconds] -format \"%B %d %Y - %H:%M\"])\"\n        set i 0\n        set f [open \"| gzip -cd $COSMICfileDownloaded\"]\n        puts \"\\t\\t...reading $COSMICfileDownloaded\"\n        while {![eof $f]} {\n            set L [gets $f]\n            set Ls [split $L \"\\t\"]\n            incr i\n            if {[expr {$i%10000000}] eq 0} {puts \"\\t$i lines read\"}\n            if {[regexp \"^COSMIC_CNV_ID|CNV_ID\" $L]} {\n                set i_id [lsearch -regexp $Ls \"^COSMIC_CNV_ID|CNV_ID\"]\n                set i_type [lsearch -exact $Ls \"MUT_TYPE\"]\n                set i_coord [lsearch -regexp $Ls \"Chromosome:G_Start\"] ;# Old raw data version (before 2023)\n                set i_chrom [lsearch -regexp $Ls \"CHROMOSOME\"]    ;# New raw data version\n                set i_start [lsearch -regexp $Ls \"GENOME_START\"]  ;# New raw data version\n                set i_end [lsearch -regexp $Ls \"GENOME_STOP\"]     ;# New raw data version\n                set L_texteToWrite(Header) \"#Chrom\\tstart\\tend\\tCOSMIC_ID\\tCOSMIC_MUT_TYP\"\n                continue\n            }\n            if {$L eq \"\"} {continue}\n            \n            set id [lindex $Ls $i_id]\n            set cnvtype [lindex $Ls $i_type]\n            \n            if {$i_coord ne -1} {\n                set coord [lindex $Ls $i_coord]\n                regexp \"^(\\[0-9\\]+):(\\[0-9\\]+)\\\\.\\\\.(\\[0-9\\]+)$\" $coord match chrom start end\n            } else {\n                set chrom [lindex $Ls $i_chrom]\n                set start [lindex $Ls $i_start]\n                set end   [lindex $Ls $i_end]\n            }\n            \n            lappend L_texteToWrite($chrom) \"$chrom\\t$start\\t$end\\t$id\\t$cnvtype\"\n        }\n        \n        puts \"\\t\\t...creation of the COSMIC bed file in $extannDir/Users/$g_AnnotSV(genomeBuild)/FtIncludedInSV/\"\n        WriteTextInFile $L_texteToWrite(Header) $COSMICfileFormatted\n        foreach chrom {1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 X Y M MT} {\n            if {![info exists L_texteToWrite($chrom)]} {continue}\n            \n            ## Remove identical lines (due to liftover_to_hg19 for example)\n            set L_texteToWrite($chrom) [lsort -unique $L_texteToWrite($chrom)]\n            \n            ## Put in karyotypic order\n            set L_texteToWrite($chrom) [lsort -command AscendingSortOnElement1 [lsort -command AscendingSortOnElement2 $L_texteToWrite($chrom)]]\n            \n            ## Write the BED file\n            WriteTextInFile [join $L_texteToWrite($chrom) \"\\n\"] $COSMICfileFormatted\n            unset L_texteToWrite($chrom)\n        }\n        \n        file delete -force $COSMICfileDownloaded\n        \n        puts \"\\t\\t   done ([clock format [clock seconds] -format \"%B %d %Y - %H:%M\"])\"\n        set g_AnnotSV(COSMICann) 1\n    }\n    \n    return\n}\n\n"
  },
  {
    "path": "share/tcl/AnnotSV/AnnotSV-cytoband.tcl",
    "content": "############################################################################################################\n# AnnotSV 3.5.8                                                                                            #\n#                                                                                                          #\n# AnnotSV: An integrated tool for Structural Variations annotation and ranking                             #\n#                                                                                                          #\n# Copyright (C) 2017-present Veronique Geoffroy (veronique.geoffroy@inserm.fr)                             #\n#                                                                                                          #\n# This is part of AnnotSV source code.                                                                     #\n#                                                                                                          #\n# This program is free software; you can redistribute it and/or                                            #\n# modify it under the terms of the GNU General Public License                                              #\n# as published by the Free Software Foundation; either version 3                                           #\n# of the License, or (at your option) any later version.                                                   #\n#                                                                                                          #\n# This program is distributed in the hope that it will be useful,                                          #\n# but WITHOUT ANY WARRANTY; without even the implied warranty of                                           #\n# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the                                            #\n# GNU General Public License for more details.                                                             #\n#                                                                                                          #\n# You should have received a copy of the GNU General Public License                                        #\n# along with this program; If not, see <http://www.gnu.org/licenses/>.                                     #\n############################################################################################################\n\n\n\n# Check the cytoband annotations files\n# Create : .../Annotations_$g_AnnotSV(organism)/AnyOverlap/CytoBand/$g_AnnotSV(genomeBuild)/cytoBand_$g_AnnotSV(genomeBuild).formatted.sorted.bed\n# (After the formatting step, the \"cytoBand_$g_AnnotSV(genomeBuild).bed\" is deleted)\nproc checkCytoband {} {\n    \n    global g_AnnotSV\n    global g_numberOfAnnotationCol\n    \n    set cytobandDir \"$g_AnnotSV(annotationsDir)/Annotations_$g_AnnotSV(organism)/AnyOverlap/CytoBand/$g_AnnotSV(genomeBuild)\"\n    set cytobandBEDfile     \"$cytobandDir/cytoBand_$g_AnnotSV(genomeBuild).bed\"\n    set formattedFile       \"$cytobandDir/cytoBand_$g_AnnotSV(genomeBuild).formatted.bed\"\n    set formattedSortedFile \"$cytobandDir/cytoBand_$g_AnnotSV(genomeBuild).formatted.sorted.bed\"\n    set cytobandHeaderFile  \"$cytobandDir/cytoBand_$g_AnnotSV(genomeBuild).header.tsv\"\n    \n    if {[file exists $cytobandBEDfile]} {\n        \n        # Create the formatted bedfile and check the header existence\n        checkBed $cytobandBEDfile $cytobandDir\n        \n        # Create the cytoband header file\n        WriteTextInFile \"#chrom\\tstart\\tend\\tCytoBand\" $cytobandHeaderFile\n        \n        # Create the formatted and sorted bedfile\n        #   Sorting of the bedfile:\n        #   Intersection with very large files can cause trouble with excessive memory usage.\n        #   A presort of the bed files by chromosome and then by start position combined with the use of the -sorted option will invoke a memory-efficient algorithm.\n        set sortTmpFile \"$g_AnnotSV(outputDir)/[clock format [clock seconds] -format \"%Y%m%d-%H%M%S\"]_[pid]_sort.tmp.bash\"\n        ReplaceTextInFile \"#!/bin/bash\" $sortTmpFile\n        WriteTextInFile \"# The locale specified by the environment can affects the traditional sort order. We need to use native byte values.\" $sortTmpFile\n        WriteTextInFile \"export LC_ALL=C\" $sortTmpFile\n        WriteTextInFile \"sort -k1,1 -k2,2n $formattedFile > $formattedSortedFile\" $sortTmpFile\n        file attributes $sortTmpFile -permissions 0755\n        if {[catch {eval exec bash $sortTmpFile} Message]} {\n            puts \"-- checkCytoband --\"\n            puts \"sort -k1,1 -k2,2n $formattedFile > $formattedSortedFile\"\n            puts \"$Message\"\n            puts \"Exit with error\"\n            exit 2\n        }\n        file delete -force $sortTmpFile\n        file delete -force $formattedFile\n        file delete -force $cytobandBEDfile\n    }\n    \n    # Number of annotation columns (without the 3 columns \"chrom start end\")\n    set g_numberOfAnnotationCol($formattedSortedFile) 1\n    \n    # Cytoband annotation?\n    if {[file exists $formattedSortedFile] && [file exists $cytobandHeaderFile]} {\n        set g_AnnotSV(cytoband) 1\n    } else {\n        set g_AnnotSV(cytoband) 0\n    }\n}\n\n"
  },
  {
    "path": "share/tcl/AnnotSV/AnnotSV-encodeblacklist.tcl",
    "content": "############################################################################################################\n# AnnotSV 3.5.8                                                                                            #\n#                                                                                                          #\n# AnnotSV: An integrated tool for Structural Variations annotation and ranking                             #\n#                                                                                                          #\n# Copyright (C) 2017-present Veronique Geoffroy (veronique.geoffroy@inserm.fr)                             #\n#                                                                                                          #\n# This is part of AnnotSV source code.                                                                     #\n#                                                                                                          #\n# This program is free software; you can redistribute it and/or                                            #\n# modify it under the terms of the GNU General Public License                                              #\n# as published by the Free Software Foundation; either version 3                                           #\n# of the License, or (at your option) any later version.                                                   #\n#                                                                                                          #\n# This program is distributed in the hope that it will be useful,                                          #\n# but WITHOUT ANY WARRANTY; without even the implied warranty of                                           #\n# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the                                            #\n# GNU General Public License for more details.                                                             #\n#                                                                                                          #\n# You should have received a copy of the GNU General Public License                                        #\n# along with this program; If not, see <http://www.gnu.org/licenses/>.                                     #\n############################################################################################################\n\n\n## - Check if the downloaded \"ENCODEblacklist.bed\" file or the formatted \"*_ENCODEblacklist.sorted.bed\" file exist\nproc checkENCODEblacklistFile {} {\n    \n    global g_AnnotSV\n    \n    ## Check if the encodeblacklist file has been downloaded then formatted\n    #############################################################\n    set extannDir \"$g_AnnotSV(annotationsDir)/Annotations_$g_AnnotSV(organism)/BreakpointsAnnotations\"\n    set encodeblacklistFileDownloaded [glob -nocomplain \"$extannDir/ENCODEblacklist/$g_AnnotSV(genomeBuild)/ENCODEblacklist.bed\"]\n    set encodeblacklistFileFormatted [glob -nocomplain \"$extannDir/ENCODEblacklist/$g_AnnotSV(genomeBuild)/*_ENCODEblacklist.sorted.bed\"]\n    \n    if {$encodeblacklistFileDownloaded eq \"\" && $encodeblacklistFileFormatted eq \"\"} {\n        # No ENCODEblacklist annotation\n        set g_AnnotSV(ENCODEblacklistAnn) 0\n        return\n    } else {\n        # ENCODEblacklist annotation\n        set g_AnnotSV(ENCODEblacklistAnn) 1\n        # Check if the user asked for these annotations in the configfile\n        set test 0\n        foreach col \"ENCODE_blacklist_left ENCODE_blacklist_characteristics_left ENCODE_blacklist_right ENCODE_blacklist_characteristics_right\" {\n            if {[lsearch -exact \"$g_AnnotSV(outputColHeader)\" $col] ne -1} {set test 1;break}\n        }\n        if {$test eq 0} {set g_AnnotSV(ENCODEblacklistAnn) 0; return}\n    }\n    \n    if {[llength $encodeblacklistFileFormatted]>1} {\n        puts \"Several ENCODE blacklist files exist:\"\n        puts \"$encodeblacklistFileFormatted\"\n        puts \"Keep only one: [lindex $encodeblacklistFileFormatted end]\\n\"\n        foreach encodeblacklist [lrange $encodeblacklistFileFormatted 0 end-1] {\n            file rename -force $encodeblacklist $encodeblacklist.notused\n        }\n        return\n    }\n    \n    if {$encodeblacklistFileFormatted eq \"\"} {\n        # The downloaded file exist but not the formatted.\n        set encodeblacklistFileFormatted \"$extannDir/ENCODEblacklist/$g_AnnotSV(genomeBuild)/[clock format [clock seconds] -format \"%Y%m%d\"]_ENCODEblacklist.sorted.bed\"\n        ReplaceTextInFile \"#Chrom\\tStart\\tEnd\\tENCODE_blacklist\\tENCODE_blacklist_characteristics\" $encodeblacklistFileFormatted.tmp\n        \n        set f [open $encodeblacklistFileDownloaded]\n        set i 0\n        set L_Text {}\n        while {![eof $f]} {\n            set L [gets $f]\n            if {$L eq \"\"} {continue}\n            if {[regexp \"^#\" $L]} {continue}\n            \n            set Ls [split $L \"\\t\"]\n            regsub \"chr\" [lindex $Ls 0] \"\" chrom\n            set start [lindex $Ls 1]\n            set end [lindex $Ls 2]\n            set IDencodeblacklist \"${chrom}:${start}-${end}\"\n            set characteristics [lindex $Ls 3]\n            \n            lappend L_Text \"$chrom\\t$start\\t$end\\t$IDencodeblacklist\\t$characteristics\"\n            if {$i>500000} {\n                WriteTextInFile [join $L_Text \"\\n\"] $encodeblacklistFileFormatted.tmp\n                set L_Text {}\n                set i 0\n            }\n            incr i\n        }\n        WriteTextInFile [join $L_Text \"\\n\"] $encodeblacklistFileFormatted.tmp\n        \n        # Sorting of the bedfile:\n        # Intersection with very large files can cause trouble with excessive memory usage.\n        # A presort of the bed files by chromosome and then by start position combined with the use of the -sorted option will invoke a memory-efficient algorithm.\n        set sortTmpFile \"$g_AnnotSV(outputDir)/[clock format [clock seconds] -format \"%Y%m%d-%H%M%S\"]_[pid]_sort.tmp.bash\"\n        ReplaceTextInFile \"#!/bin/bash\" $sortTmpFile\n        WriteTextInFile \"# The locale specified by the environment can affects the traditional sort order. We need to use native byte values.\" $sortTmpFile\n        WriteTextInFile \"export LC_ALL=C\" $sortTmpFile\n        WriteTextInFile \"sort -k1,1 -k2,2n $encodeblacklistFileFormatted.tmp > $encodeblacklistFileFormatted\" $sortTmpFile\n        file attributes $sortTmpFile -permissions 0755\n        if {[catch {eval exec bash $sortTmpFile} Message]} {\n            puts \"-- checkENCODEblacklistFile --\"\n            puts \"sort -k1,1 -k2,2n $encodeblacklistFileFormatted.tmp > $encodeblacklistFileFormatted\"\n            puts \"$Message\"\n            puts \"Exit with error\"\n            exit 2\n        }\n        file delete -force $sortTmpFile\n        file delete -force $encodeblacklistFileFormatted.tmp\n        file delete -force $encodeblacklistFileDownloaded\n        \n        close $f\n        \n        return\n    }\n}\n\n\n\nproc ENCODEblacklistAnnotation {BreakpointChrom BreakpointPos} {\n    \n    global g_AnnotSV\n    global g_ENCODEblacklist_coord\n    global g_ENCODEblacklist_charact\n    global g_ENCODEblacklist\n    \n    \n    # headerOutput \"ENCODE_blacklists_coord_left ENCODE_blacklists_type_left\" or \"ENCODE_blacklists_coord_right and ENCODE_blacklists_type_right\"\n    # (ENCODEblacklistAnnotation is executed for each breakpoint)\n    set g_ENCODEblacklist(Empty) \"\\t\"\n    \n    set extannDir \"$g_AnnotSV(annotationsDir)/Annotations_$g_AnnotSV(organism)/BreakpointsAnnotations\"\n    set encodeblacklistFileFormatted [glob -nocomplain \"$extannDir/ENCODEblacklist/$g_AnnotSV(genomeBuild)/*_ENCODEblacklist.sorted.bed\"]\n    \n    if {![info exists g_ENCODEblacklist(DONE)]} {\n        \n        # Creation of a bedfile with all breakpoints +/- 100 bp:\n        # => done during the GC content annotation (if \"GC content\" annotation is in the output (user defined))\n        # FORMAT:  chrom   'breakpoint-100'   'breakpoint+100'   'breakpoint'\n        regsub -nocase \"(.formatted)?.bed$\" $g_AnnotSV(bedFile) \".breakpoints.bed\" tmpBreakpointsFile\n        set tmpBreakpointsFile \"$g_AnnotSV(outputDir)/[file tail $tmpBreakpointsFile]\"\n        if {![file exists $tmpBreakpointsFile]} {\n            file delete -force $tmpBreakpointsFile.tmp\n            set i 0\n            set L_LinesToWrite {}\n            set f [open $g_AnnotSV(bedFile)]\n            while {![eof $f]} {\n                set L [gets $f]\n                if {$L eq \"\"} {continue}\n                set Ls [split $L \"\\t\"]\n                set chrom [lindex $Ls 0]\n                set start [lindex $Ls 1]\n                set end [lindex $Ls 2]\n                set start_breakpoint1 [expr $start-100]; if {$start_breakpoint1 < 0} {set start_breakpoint1 0}\n                set end_breakpoint1 [expr $start+100]  ; if {$end_breakpoint1 < 0} {set end_breakpoint1 0}\n                set start_breakpoint2 [expr $end-100]  ; if {$start_breakpoint2 < 0} {set start_breakpoint2 0}\n                set end_breakpoint2 [expr $end+100]    ; if {$end_breakpoint2 < 0} {set end_breakpoint2 0}\n                lappend L_LinesToWrite \"$chrom\\t$start_breakpoint1\\t$end_breakpoint1\\t$start\"\n                lappend L_LinesToWrite \"$chrom\\t$start_breakpoint2\\t$end_breakpoint2\\t$end\"\n                incr i\n                if {$i>100000} {\n                    WriteTextInFile [join [lsort -unique $L_LinesToWrite] \"\\n\"] $tmpBreakpointsFile.tmp\n                    set L_LinesToWrite {}\n                    set i 0\n                }\n            }\n            close $f\n            WriteTextInFile [join [lsort -unique $L_LinesToWrite] \"\\n\"] $tmpBreakpointsFile.tmp\n            unset L_LinesToWrite\n            \n            # Sorting of the bedfile:\n            # Intersection with very large files can cause trouble with excessive memory usage.\n            # A presort of the bed files by chromosome and then by start position combined with the use of the -sorted option will invoke a memory-efficient algorithm.\n            set sortTmpFile \"$g_AnnotSV(outputDir)/[clock format [clock seconds] -format \"%Y%m%d-%H%M%S\"]_[pid]_sort.tmp.bash\"\n            ReplaceTextInFile \"#!/bin/bash\" $sortTmpFile\n            WriteTextInFile \"# The locale specified by the environment can affects the traditional sort order. We need to use native byte values.\" $sortTmpFile\n            WriteTextInFile \"export LC_ALL=C\" $sortTmpFile\n            WriteTextInFile \"sort -k1,1 -k2,2n $tmpBreakpointsFile.tmp > $tmpBreakpointsFile\" $sortTmpFile\n            file attributes $sortTmpFile -permissions 0755\n            if {[catch {eval exec bash $sortTmpFile} Message]} {\n                puts \"-- ENCODEblacklistAnnotation, sort --\"\n                puts \"sort -k1,1 -k2,2n $tmpBreakpointsFile.tmp > $tmpBreakpointsFile\"\n                puts \"$Message\"\n                puts \"Exit with error\"\n                exit 2\n            }\n            file delete -force $sortTmpFile\n            file delete -force $tmpBreakpointsFile.tmp\n            \n        }\n        \n        # Intersect\n        regsub -nocase \"(.formatted)?.bed$\" $g_AnnotSV(bedFile) \".intersect.ENCODEblacklist.bed\" tmpENCODEblacklistFile\n        set tmpENCODEblacklistFile \"$g_AnnotSV(outputDir)/[file tail $tmpENCODEblacklistFile]\"\n        file delete -force $tmpENCODEblacklistFile\n        if {[catch {exec $g_AnnotSV(bedtools) intersect -sorted -a $tmpBreakpointsFile -b $encodeblacklistFileFormatted -wa -wb > $tmpENCODEblacklistFile} Message]} {\n            if {[catch {exec $g_AnnotSV(bedtools) intersect -a $tmpBreakpointsFile -b $encodeblacklistFileFormatted -wa -wb > $tmpENCODEblacklistFile} Message]} {\n                puts \"-- ENCODEblacklistAnnotation, intersect --\"\n                puts \"$g_AnnotSV(bedtools) intersect -sorted -a $tmpBreakpointsFile -b $encodeblacklistFileFormatted -wa -wb > $tmpENCODEblacklistFile\"\n                puts \"$Message\"\n                puts \"Exit with error\"\n                exit 2\n            }\n        }\n        \n        # Loading g_ENCODEblacklist for each SV breakpoint\n        set f [open $tmpENCODEblacklistFile]\n        while {![eof $f]} {\n            set L [gets $f]\n            if {$L eq \"\"} {continue}\n            set Ls [split $L \"\\t\"]\n            \n            set chrom [lindex $Ls 0]\n            set breakpoint [lindex $Ls 3]\n            #set encodeblacklistChrom [lindex $Ls 4]\n            #set encodeblacklistStart [lindex $Ls 5]\n            #set encodeblacklistEnd [lindex $Ls 6]\n            #set encodeblacklistCoord [lindex $Ls 7]\n            #set encodeblacklistCharact [lindex $Ls 8]\n            \n            lappend g_ENCODEblacklist_coord($chrom,$breakpoint) [lindex $Ls 7]\n            lappend g_ENCODEblacklist_charact($chrom,$breakpoint) [lindex $Ls 8]\n        }\n        \n        set g_ENCODEblacklist(DONE) 1\n        file delete -force $tmpENCODEblacklistFile\n    }\n    \n    if {[info exist g_ENCODEblacklist_coord($BreakpointChrom,$BreakpointPos)]} {\n        return \"[join $g_ENCODEblacklist_coord($BreakpointChrom,$BreakpointPos) \";\"]\\t[join $g_ENCODEblacklist_charact($BreakpointChrom,$BreakpointPos) \";\"]\"\n    } else {\n        return $g_ENCODEblacklist(Empty)\n    }\n}\n\n"
  },
  {
    "path": "share/tcl/AnnotSV/AnnotSV-exac.tcl",
    "content": "############################################################################################################\n# AnnotSV 3.5.8                                                                                            #\n#                                                                                                          #\n# AnnotSV: An integrated tool for Structural Variations annotation and ranking                             #\n#                                                                                                          #\n# Copyright (C) 2017-present Veronique Geoffroy (veronique.geoffroy@inserm.fr)                             #\n#                                                                                                          #\n# This is part of AnnotSV source code.                                                                     #\n#                                                                                                          #\n# This program is free software; you can redistribute it and/or                                            #\n# modify it under the terms of the GNU General Public License                                              #\n# as published by the Free Software Foundation; either version 3                                           #\n# of the License, or (at your option) any later version.                                                   #\n#                                                                                                          #\n# This program is distributed in the hope that it will be useful,                                          #\n# but WITHOUT ANY WARRANTY; without even the implied warranty of                                           #\n# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the                                            #\n# GNU General Public License for more details.                                                             #\n#                                                                                                          #\n# You should have received a copy of the GNU General Public License                                        #\n# along with this program; If not, see <http://www.gnu.org/licenses/>.                                     #\n############################################################################################################\n\n\n# ExAC downloaded file: \"fordist_cleaned_nonpsych_z_pli_rec_null_data.txt\"\n# Header:\n# transcript  gene  chr  n_exons tx_start  tx_end  bp   p_syn  p_mis   p_lof   n_syn   n_mis   n_lof   adj_exp_syn  adj_exp_mis   adj_exp_lof   syn_z   mis_z  lof_z   pLI   pRecessive  pNull\n\n## - Check if the ExAC file has been downloaded:\n#    - fordist_cleaned_nonpsych_z_pli_rec_null_data.txt\n#\n## - Check and create if necessary the following file:\n#    - 'date'_ExAC-Zscore.annotations.tsv.gz\nproc checkGeneIntoleranceFile {} {\n    \n    global g_AnnotSV\n    \n    ## Check if the GeneIntolerance file has been downloaded then formatted\n    ######################################################################\n    set extannDir \"$g_AnnotSV(annotationsDir)/Annotations_$g_AnnotSV(organism)/Gene-based\"\n    \n    set GeneIntoleranceFileDownloaded [glob -nocomplain \"$extannDir/ExAC/fordist_cleaned_nonpsych_z_pli_rec_null_data.txt\"]\n    set GeneIntoleranceFileFormattedGzip [glob -nocomplain \"$extannDir/ExAC/*_GeneIntolerance-Zscore.annotations.tsv.gz\"]\n    \n    if {$GeneIntoleranceFileDownloaded eq \"\" && $GeneIntoleranceFileFormattedGzip eq \"\"} {\n        # No \"Gene Intolerance\" annotation\n        return\n    }\n    \n    if {[llength $GeneIntoleranceFileFormattedGzip]>1} {\n        puts \"Several Gene Intolerance files exist:\"\n        puts \"$GeneIntoleranceFileFormattedGzip\"\n        puts \"Keep only one: [lindex $GeneIntoleranceFileFormattedGzip end]\\n\"\n        foreach gi [lrange $GeneIntoleranceFileFormattedGzip 0 end-1] {\n            file rename -force $gi $gi.notused\n        }\n        return\n    }\n    \n    if {$GeneIntoleranceFileFormattedGzip eq \"\"} {\n        ## Create : 'date'_GeneIntolerance-Zscore.annotations.tsv.gz   ; # Header: chr start end syn_z mis_z\n        set GeneIntoleranceFileFormatted \"$extannDir/ExAC/[clock format [clock seconds] -format \"%Y%m%d\"]_GeneIntolerance-Zscore.annotations.tsv\"\n        \n        puts \"\\t...GeneIntolerance configuration for Z scores annotation from ExAC ([clock format [clock seconds] -format \"%B %d %Y - %H:%M\"])\"\n        \n        puts \"\\t\\t...creation of $GeneIntoleranceFileFormatted.gz\"\n        puts \"\\t\\t   (done only once during the first GeneIntolerance annotation)\"\n        \n        set TexteToWrite {genes\\tsynZ_ExAC\\tmisZ_ExAC}\n        foreach L [LinesFromFile $GeneIntoleranceFileDownloaded] {\n            if {[regexp  \"^transcript\" $L]} {\n                set i_gene    [lsearch -regexp $L \"^gene\"]; if {$i_gene == -1} {puts \"Bad syntax into $GeneIntoleranceFileDownloaded.\\ngene field not found - Exit with error\"; exit 2}\n                set i_synZ    [lsearch -regexp $L \"^syn_z\"]; if {$i_synZ == -1} {puts \"Bad syntax into $GeneIntoleranceFileDownloaded.\\nsyn_z field not found - Exit with error\"; exit 2}\n                set i_misZ    [lsearch -regexp $L \"^mis_z\"]; if {$i_misZ == -1} {puts \"Bad syntax into $GeneIntoleranceFileDownloaded.\\nmis_z field not found - Exit with error\"; exit 2}\n                continue\n            }\n            set Ls [split $L \"\\t\"]\n            \n            set gene [lindex $Ls $i_gene]\n            set synZ [lindex $Ls $i_synZ]\n            set misZ [lindex $Ls $i_misZ]\n            \n            lappend TexteToWrite \"$gene\\t$synZ\\t$misZ\"\n        }\n        WriteTextInFile [join $TexteToWrite \"\\n\"] $GeneIntoleranceFileFormatted\n        if {[catch {exec gzip $GeneIntoleranceFileFormatted} Message]} {\n            puts \"-- checkGeneIntoleranceFile --\"\n            puts \"gzip $GeneIntoleranceFileFormatted\"\n            puts \"$Message\\n\"\n        }\n        \n        file delete -force $GeneIntoleranceFileDownloaded\n    }\n}\n\n\n# gene: Gencode ID\n# chr: chromosome\n# start: genomic coordinate gene start\n# end: genomic coordinate gene end\n# gene_symbol: HUGO gene symbol\n# mean_rd: Average read depth of gene across all individuals\n# gc_content: Proportion of gene that is GC\n# complexity: sequence complexity\n# cds_len: Number of targeted coding bases\n# gene_length: Total gene length\n# num_targ: Number of targets of the gene included in CNV calling\n# segdups: number of pairs of segmental duplications gene is within\n# dip: Number of confident diploid calls\n# del: Number of confident deletion calls\n# dup: Number of confident duplication calls\n# del.sing: Number of confident deletion calls spanning only a single gene\n# dup.sing: Number of confident duplication calls spanning only a single gene\n# del.sing.score: Winsorised single-gene deletion intolerance z-score\n# dup.sing.score: Winsorised single-gene duplication intolerance z-score\n# del.score: Winsorised deletion intolerance z-score\n# dup.score: Winsorised duplication intolerance z-score\n# cnv.score: Winsorised cnv intolerance z-score\n# flag: Gene is in a known region of recurrent CNVs mediated by tandem segmental duplications and intolerance scores are more likely to be biased or noisy.\n#\n\n## - Check if the ExAC file has been downloaded:\n#    - exac-final-cnv.gene.scores071316\n#\n## - Check and create if necessary the following file:\n#    - 'date'_ExAC.CNV-Zscore.annotations.tsv.gz\nproc checkCNVintoleranceFile {} {\n    \n    global g_AnnotSV\n    \n    ## Check if the CNVintoleranceFile has been downloaded then formatted\n    ######################################################################\n    set extannDir \"$g_AnnotSV(annotationsDir)/Annotations_$g_AnnotSV(organism)/Gene-based\"\n    \n    set CNVintoleranceFileDownloaded [glob -nocomplain \"$extannDir/ExAC/exac-final-cnv.gene.scores071316\"]\n    set CNVintoleranceFileFormattedGzip [glob -nocomplain \"$extannDir/ExAC/*_ExAC.CNV-Zscore.annotations.tsv.gz\"]\n    \n    if {$CNVintoleranceFileDownloaded eq \"\" && $CNVintoleranceFileFormattedGzip eq \"\"} {\n        # No \"CNV Intolerance\" annotation\n        return\n    }\n    \n    if {[llength $CNVintoleranceFileFormattedGzip]>1} {\n        puts \"Several CNV-Intolerant-Genes files exist:\"\n        puts \"$CNVintoleranceFileFormattedGzip\"\n        puts \"Keep only one: [lindex $CNVintoleranceFileFormattedGzip end]\\n\"\n        foreach ci [lrange $CNVintoleranceFileFormattedGzip 0 end-1] {\n            file rename -force $ci $ci.notused\n        }\n        return\n    }\n    \n    if {$CNVintoleranceFileFormattedGzip eq \"\"} {\n        ## Create : 'date'_ExAC.CNV-Zscore.annotations.tsv.gz ; # Header: genes   delZ_ExAC       dupZ_ExAC       cnvZ_ExAC\n        \n        set CNVintoleranceFileFormatted \"$extannDir/ExAC/[clock format [clock seconds] -format \"%Y%m%d\"]_ExAC.CNV-Zscore.annotations.tsv\"\n        \n        puts \"\\t...ExAC CNV Intolerant Genes configuration ([clock format [clock seconds] -format \"%B %d %Y - %H:%M\"])\"\n        \n        puts \"\\t\\t...creation of $CNVintoleranceFileFormatted.gz\"\n        puts \"\\t\\t   (done only once during the first CNV Intolerant Genes  annotation)\"\n        \n        set TexteToWrite {genes\\tdelZ_ExAC\\tdupZ_ExAC\\tcnvZ_ExAC}\n        foreach L [LinesFromFile $CNVintoleranceFileDownloaded] {\n            \n            set Ls [split $L \" \"]\n            \n            if {[regexp  \"^gene\" $Ls]} {\n                set i_gene    [lsearch -regexp $Ls \"^gene_symbol\"]; if {$i_gene == -1} {puts \"Bad syntax into $CNVintoleranceFileDownloaded.\\ngene_symbol field not found - Exit with error\"; exit 2}\n                set i_cnvZ    [lsearch -regexp $Ls \"^cnv.score\"];   if {$i_cnvZ == -1} {puts \"Bad syntax into $CNVintoleranceFileDownloaded.\\ncnv.score field not found - Exit with error\"; exit 2}\n                set i_delZ    [lsearch -regexp $Ls \"^del.score\"];   if {$i_delZ == -1} {puts \"Bad syntax into $CNVintoleranceFileDownloaded.\\ndel.score field not found - Exit with error\"; exit 2}\n                set i_dupZ    [lsearch -regexp $Ls \"^dup.score\"];   if {$i_dupZ == -1} {puts \"Bad syntax into $CNVintoleranceFileDownloaded.\\ndup.score field not found - Exit with error\"; exit 2}\n                continue\n            }\n            \n            set gene [lindex $Ls $i_gene]\n            set delZ [lindex $Ls $i_delZ]\n            set dupZ [lindex $Ls $i_dupZ]\n            set cnvZ [lindex $Ls $i_cnvZ]\n            \n            if {![info exists del($gene)]} {\n                set del($gene) $delZ\n                set dup($gene) $dupZ\n                set cnv($gene) $cnvZ\n            } else {\n                ## The file has several entries for 63 genes (several \"Gencode ID\" for 1 \"Gene symbo\")\n                ## We keep the highest value\n                if {$delZ > $del($gene)} {set del($gene) $delZ}\n                if {$dupZ > $dup($gene)} {set dup($gene) $dupZ}\n                if {$cnvZ > $cnv($gene)} {set cnv($gene) $cnvZ}\n            }\n            \n        }\n        \n        foreach gene [array names del] {\n            lappend TexteToWrite \"$gene\\t$del($gene)\\t$dup($gene)\\t$cnv($gene)\"\n        }\n        WriteTextInFile [join $TexteToWrite \"\\n\"] $CNVintoleranceFileFormatted\n        \n        if {[catch {exec gzip $CNVintoleranceFileFormatted} Message]} {\n            puts \"-- checkCNVintoleranceFile --\"\n            puts \"gzip $CNVintoleranceFileFormatted\"\n            puts \"$Message\\n\"\n        }\n        \n        file delete -force $CNVintoleranceFileDownloaded\n    }\n}\n\n"
  },
  {
    "path": "share/tcl/AnnotSV/AnnotSV-exomiser.tcl",
    "content": "############################################################################################################\n# AnnotSV 3.5.8                                                                                            #\n#                                                                                                          #\n# AnnotSV: An integrated tool for Structural Variations annotation and ranking                             #\n#                                                                                                          #\n# Copyright (C) 2017-present Veronique Geoffroy (veronique.geoffroy@inserm.fr)                             #\n#                                                                                                          #\n# This is part of AnnotSV source code.                                                                     #\n#                                                                                                          #\n# This program is free software; you can redistribute it and/or                                            #\n# modify it under the terms of the GNU General Public License                                              #\n# as published by the Free Software Foundation; either version 3                                           #\n# of the License, or (at your option) any later version.                                                   #\n#                                                                                                          #\n# This program is distributed in the hope that it will be useful,                                          #\n# but WITHOUT ANY WARRANTY; without even the implied warranty of                                           #\n# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the                                            #\n# GNU General Public License for more details.                                                             #\n#                                                                                                          #\n# You should have received a copy of the GNU General Public License                                        #\n# along with this program; If not, see <http://www.gnu.org/licenses/>.                                     #\n############################################################################################################\n\n# Start the REST service for Exomiser\n# OUTPUT = pid of the command (or \"\" if the service has not been successfully started)\nproc startTheRESTservice {applicationPropertiesTmpFile port exomiserStartServiceFile} {\n    \n    global g_AnnotSV\n    \n    set jarFile [lindex [glob -nocomplain $g_AnnotSV(annotationsDir)/jar/exomiser-rest-prioritiser-*.jar] end]\n    \n    # Run the service\n    \n    if {[catch {set idService [eval exec java -Xmx4g -jar $jarFile --server.port=$port --spring.config.location=$applicationPropertiesTmpFile >& $exomiserStartServiceFile &]} Message]} {\n        puts \"\\nWARNING: No Exomiser annotations available.\"\n        puts \"The REST service has not been started successfully:\"\n        puts \"java -Xmx4g -jar $jarFile --server.port=$port --spring.config.location=$applicationPropertiesTmpFile >& $exomiserStartServiceFile\"\n        puts \"$Message\"\n        set g_AnnotSV(hpo) \"\"\n        file delete -force $exomiserStartServiceFile\n        set idService \"\"\n    } else {\n        # Wait (max 5 minutes) for the start\n        set waiting 1\n        set i 1\n        while {$waiting} {\n            after 6000 ; # 6s\n            if {[catch {set s [socket localhost $port]} Message]} {\n                # The REST service is not started yet, we have the following error message: \"couldn't open socket: connection refused\"\n                incr i\n                if {$i eq 50} { ;# 50 x 6s = 5 min\n                    set waiting 0\n                }\n            } else {\n                # The REST service has successfully started\n                close $s\n                set waiting 0\n            }\n            if {[file exists $exomiserStartServiceFile]} {\n                if {[regexp \"APPLICATION FAILED TO START|Application run failed\" [ContentFromFile $exomiserStartServiceFile]]} {\n                    # The REST service failed to start\n                    set i 50\n                    set waiting 0\n                }\n                foreach L [LinesFromFile $exomiserStartServiceFile] {\n                    if {[regexp \"^ERROR\" $L]} {\n                        puts $L\n                        set i 50\n                        set waiting 0\n                    }\n                }\n            }\n        }\n        \n        if {$i eq 50} {\n            # if the REST service has not started after 10 minutes\n            puts \"\\nWARNING: No Exomiser annotations available.\"\n            puts \"The REST service has not been started successfully:\"\n            puts \"java -Xmx4g -jar $jarFile --server.port=$port --spring.config.location=$applicationPropertiesTmpFile >& $exomiserStartServiceFile\"\n            puts \"(see $exomiserStartServiceFile)\"\n            set g_AnnotSV(hpo) \"\"\n            set idService \"\"\n        } else {\n            # The REST service has been successfully started\n            puts \"\\t...idService = $idService\\n\"\n        }\n    }\n    return $idService\n}\n\n\n## - Check if the exomiser installation is ok\nproc checkExomiserInstallation {} {\n    \n    global g_AnnotSV\n    global hpoVersion\n    \n    \n    #    # Check the existence of the \"$NCBIandHGNCgeneDir/results.txt\" file (for Human annotations)\n    #    # Approved symbol Alias symbol    Previous symbol NCBI Gene ID\n    #    # A1BG-AS1        FLJ23569        NCRNA00181      503538\n    #    set NCBIandHGNCgeneDir \"$g_AnnotSV(annotationsDir)/Annotations_$g_AnnotSV(organism)/Gene-based/NCBIandHGNCgeneID\"\n    #    if {![regexp \"Human\" $g_AnnotSV(organism)]} {\n        #        ## Checked the organism: should be \"Human\"\n        #        set g_AnnotSV(hpo) \"\"\n        #    } elseif {![file exists \"$NCBIandHGNCgeneDir/results.txt\"]} {\n        #        ## Checked if the \"results.txt\" file exists\n        #        puts \"\\nWARNING: No Exomiser annotations available.\"\n        #        puts \"...$NCBIandHGNCgeneDir/results.txt doesn't exist\"\n        #        set g_AnnotSV(hpo) \"\"\n        #    } elseif {![file exists \"$NCBIandHGNCgeneDir/geneSymbol_NCBIandHGNCgeneID.tsv\"]} {\n        #        # Checked if the \"geneSymbol_NCBIandHGNCgeneID.tsv\" file exists\n        #        set L_TextToWrite {\"genes\\tNCBI_gene_ID\"}\n        #        foreach L [LinesFromFile \"$NCBIandHGNCgeneDir/results.txt\"] {\n            #            set Ls [split $L \"\\t\"]\n            #            set NCBIandHGNCgeneID [lindex $Ls 3]\n            #            if {$NCBIandHGNCgeneID eq \"\" || $NCBIandHGNCgeneID eq \"NCBI Gene ID\"} {continue}\n            #            set ApprovedSymbol [lindex $Ls 0]\n            #            if {$ApprovedSymbol ne \"\" && ![info exist tmp($ApprovedSymbol)]} {set tmp($ApprovedSymbol) 1; lappend L_TextToWrite \"$ApprovedSymbol\\t$NCBIandHGNCgeneID\"}\n            #            set AliasSymbol [lindex $Ls 1]\n            #            if {$AliasSymbol ne \"\" && ![info exist tmp($AliasSymbol)]} {set tmp($AliasSymbol) 1; lappend L_TextToWrite \"$AliasSymbol\\t$NCBIandHGNCgeneID\"}\n            #            set PreviousSymbol [lindex $Ls 2]\n            #            if {$PreviousSymbol ne \"\" && ![info exist tmp($PreviousSymbol)]} {set tmp($PreviousSymbol) 1; lappend L_TextToWrite \"$PreviousSymbol\\t$NCBIandHGNCgeneID\"}\n            #        }\n        #        WriteTextInFile [join $L_TextToWrite \"\\n\"] \"$NCBIandHGNCgeneDir/geneSymbol_NCBIandHGNCgeneID.tsv\"\n        #    }\n    \n    ## Check if the Exomiser data files exist\n    ## + HPO citation\n    set L_hpoDir [glob -nocomplain $g_AnnotSV(annotationsDir)/Annotations_Exomiser/*]\n    set L_hpoDir_ok {}\n    foreach hpoDir $L_hpoDir {\n        if {[regexp \"^(\\[0-9\\]+)$\" [file tail $hpoDir] match hpoDir]} {\n            lappend L_hpoDir_ok $hpoDir\n        }\n    }\n    if {$L_hpoDir_ok ne \"\"} {\n        set hpoVersion [lindex [lsort -integer $L_hpoDir_ok] end]\n        if {$g_AnnotSV(hpo) ne \"\"} {\n            puts \"\\tINFO: AnnotSV takes use of Exomiser (Smedley et al., 2015) for the phenotype-driven analysis.\"\n            puts \"\\tINFO: AnnotSV is using the Human Phenotype Ontology (version $hpoVersion). Find out more at http://www.human-phenotype-ontology.org\"\n        }\n        ## Check the existence of the application properties file\n        if {![file exist $g_AnnotSV(etcDir)/application.properties] && ![file exist $g_AnnotSV(annotationsDir)/Annotations_Exomiser/$hpoVersion/application.properties]} {\n            puts \"\\nWARNING: No Exomiser application properties file available\"\n            puts \"...$g_AnnotSV(etcDir)/application.properties doesn't exist\\n\"\n            puts \"...$g_AnnotSV(annotationsDir)/Annotations_Exomiser/$hpoVersion/application.properties doesn't exist\\n\"\n            set g_AnnotSV(hpo) \"\"\n        }\n    } else {\n        puts \"\\nWARNING: No Exomiser annotations available in $g_AnnotSV(annotationsDir)/Annotations_Exomiser/\\n\"\n        set g_AnnotSV(hpo) \"\"\n    }\n    \n    return\n}\n\n\n\n# Creation of the g_Exomiser variable:\n# g_Exomiser($geneName) = EXOMISER_GENE_PHENO_SCORE\\tHUMAN_PHENO_EVIDENCE\\tMOUSE_PHENO_EVIDENCE\\tFISH_PHENO_EVIDENCE\n# default = \"\\t-1.0\\t\\t\\t\"\n# INPUTS:\n# L_genes: e.g. \"FGFR2\"\n# L_HPO:   e.g. \"HP:0001156,HP:0001363,HP:0011304,HP:0010055\"\n#\n# INFO: This proc is run from \"AnnotSV-regulatoryelements.tcl\"\nproc runExomiser {L_Genes L_HPO} {\n    \n    global g_AnnotSV\n    global hpoVersion\n    global g_Exomiser\n    \n    puts \"...running Exomiser on [llength $L_Genes] gene names ([clock format [clock seconds] -format \"%B %d %Y - %H:%M\"])\"\n    # Tcl 8.5 is required for use of the json package.\n    package require http\n    package require json 1.3.3\n    \n    # Creation of the temporary \"application.properties\" file\n    if {[catch {set port [exec bash $g_AnnotSV(bashDir)/searchForAFreePortNumber.bash]} Message]} {\n        puts \"$Message\"\n        puts \"WARNING: port is defined to 50000\"\n        set port 50000\n    }\n    puts \"\\t...on port $port\"\n    \n    set applicationPropertiesTmpFile \"$g_AnnotSV(outputDir)/[clock format [clock seconds] -format \"%Y%m%d-%H%M%S\"]_[pid]_exomiser_application.properties\"\n    if {[file exist $g_AnnotSV(etcDir)/application.properties]} {\n        set infos [ContentFromFile $g_AnnotSV(etcDir)/application.properties]\n    } elseif {[file exist $g_AnnotSV(annotationsDir)/Annotations_Exomiser/$hpoVersion/application.properties]} {\n        set infos [ContentFromFile $g_AnnotSV(annotationsDir)/Annotations_Exomiser/$hpoVersion/application.properties]\n    }\n    regsub \"XXXX\" $infos \"$port\" infos\n    regsub \"YYYY\" $infos \"$g_AnnotSV(annotationsDir)/Annotations_Exomiser/$hpoVersion\" infos\n    regsub \"ZZZZ\" $infos \"$hpoVersion\" infos\n    WriteTextInFile $infos $applicationPropertiesTmpFile\n    \n    # Start the REST service\n    set exomiserStartServiceFile \"$g_AnnotSV(outputDir)/[clock format [clock seconds] -format \"%Y%m%d-%H%M%S\"]_[pid]_exomiser.tmp\"\n    puts \"\\t...starting the REST service\"\n    set idService [startTheRESTservice $applicationPropertiesTmpFile $port $exomiserStartServiceFile]\n    if {$idService ne \"\"} {\n        # Requests\n        foreach geneName $L_Genes {\n            # Search the geneID of the geneName\n            set geneID [searchforNCBIGeneID $geneName]\n            \n            # Check if the information exists\n            if {$geneID eq \"\"} {continue}\n            \n            # Exomiser request\n            set url \"http://localhost:${port}/exomiser/api/prioritise/?phenotypes=${L_HPO}&prioritiser=hiphive&prioritiser-params=human,mouse,fish,ppi&genes=$geneID\"\n            if {[catch {\n                    set token [::http::geturl $url]\n                    set exomiserResult [::http::data $token]\n                    ::http::cleanup $token\n                    set d_all [::json::json2dict $exomiserResult]\n                } Message]} {\n                puts \"geneName: $geneName\"\n                puts \"$Message\\n\"\n                puts \"$url\"\n                continue\n            }\n            # The exomiser http request can be used for x genes -> in this case, it returns in the results a list of dictionary, 1 for each gene\n            # If the http request is only for 1 gene, the result is a list of 1 dict.\n            # => We use only the first element of the results, which is a dict (a list of key-value)\n            if {[catch {set d_results [lindex [dict get $d_all \"results\"] 0]} Message]} {\n                continue\n            }\n            # dict for {theKey theValue} $d_results {\n                #    puts \"$theKey -> $theValue\\n\"\n                # }\n            \n            if {[catch {set EXOMISER_GENE_PHENO_SCORE [dict get $d_results \"score\"]} Message]} {\n                continue\n            }\n            set EXOMISER_GENE_PHENO_SCORE [format \"%.4f\" $EXOMISER_GENE_PHENO_SCORE]\n            \n            if {[catch {set d_phenotypeEvidence [dict get $d_results \"phenotypeEvidence\"]} Message]} {\n                continue\n            }\n            # -> return a list of dictionary, 1 for each organism:\n            # puts [llength $d_phenotypeEvidence] ; # = 2 (HUMAN + MOUSE)\n            \n            #dict for {theKey theValue} [lindex $d_phenotypeEvidence 0] {\n                #    puts \"$theKey -> $theValue\\n\"\n                #}\n            \n            # score -> 0.8790527581872061\n            #\n            # model -> organism HUMAN entrezGeneId 2263 humanGeneSymbol FGFR2 diseaseId OMIM:101600 diseaseTerm {Craniofacial-skeletal-dermatologic dysplasia} phenotypeIds {HP:0000494 HP:0005347 HP:0000452 HP:0003041 HP:0005280 HP:0011304 HP:0000006 HP:0000303 HP:0002308 HP:0006101 HP:0000327 HP:0000586 HP:0000244 HP:0000486 HP:0003795 HP:0002780 HP:0004440 HP:0003196 HP:0003070 HP:0010055 HP:0000238 HP:0000678 HP:0006110 HP:0001249 HP:0000218 HP:0000316 HP:0000453 HP:0002676} id OMIM:101600_2263\n            #\n            # bestModelPhenotypeMatches -> {query {id HP:0001156 label Brachydactyly} match {id HP:0006101 label {Finger syndactyly}} lcs {id MP:0002110 label {}} ic 2.6619180857144342 simj 0.64 score 1.3052308511743194} {query {id HP:0001363 label Craniosynostosis} match {id HP:0004440 label {Coronal craniosynostosis}} lcs {id HP:0001363 label Craniosynostosis} ic 5.851950660605321 simj 0.9411764705882353 score 2.3468528434490747} {query {id HP:0010055 label {Broad hallux}} match {id HP:0010055 label {Broad hallux}} lcs {id HP:0010055 label {Broad hallux}} ic 7.8438437682151125 simj 1.0 score 2.800686303072001} {query {id HP:0011304 label {Broad thumb}} match {id HP:0011304 label {Broad thumb}} lcs {id HP:0011304 label {Broad thumb}} ic 6.728560751270146 simj 1.0 score 2.5939469445750323}\n            set HUMAN_PHENO_EVIDENCE {}\n            set MOUSE_PHENO_EVIDENCE {}\n            set FISH_PHENO_EVIDENCE  {}\n            foreach d_organism $d_phenotypeEvidence {\n                if {[catch {set actualOrganism [dict get $d_organism model organism]} Message]} {\n                    continue\n                } else {\n                    catch {lappend ${actualOrganism}_PHENO_EVIDENCE [dict get $d_organism model diseaseTerm]} Message\n                    if {[catch {set L_best [dict get $d_organism bestModelPhenotypeMatches]} Message]} {\n                        continue\n                    } else {\n                        foreach d_query $L_best {\n                            catch {lappend ${actualOrganism}_PHENO_EVIDENCE  [dict get $d_query query label]} Message\n                            catch {lappend ${actualOrganism}_PHENO_EVIDENCE  [dict get $d_query match label]} Message\n                        }\n                    }\n                }\n            }\n            set HUMAN_PHENO_EVIDENCE [lsort -unique $HUMAN_PHENO_EVIDENCE]\n            set MOUSE_PHENO_EVIDENCE [lsort -unique $MOUSE_PHENO_EVIDENCE]\n            set FISH_PHENO_EVIDENCE  [lsort -unique $FISH_PHENO_EVIDENCE]\n            \n            set g_Exomiser($geneName) \"$EXOMISER_GENE_PHENO_SCORE\\t[join $HUMAN_PHENO_EVIDENCE \";\"]\\t[join $MOUSE_PHENO_EVIDENCE \";\"]\\t[join $FISH_PHENO_EVIDENCE \";\"]\"\n        }\n        \n        # End the REST service\n        if {[catch {exec kill -9 $idService} Message]} {\n            puts \"End the REST service:\"\n            puts $Message\n        }\n        \n        file delete -force $exomiserStartServiceFile\n    }\n    \n    # Remove tmp files\n    file delete -force $applicationPropertiesTmpFile\n    \n    \n    return \"\"\n}\n\n\n# g_Exomiser($geneName) = EXOMISER_GENE_PHENO_SCORE\\tHUMAN_PHENO_EVIDENCE\\tMOUSE_PHENO_EVIDENCE\\tFISH_PHENO_EVIDENCE\n# Return either only the score or all the annotation:\n# what = \"score\" or \"all\"\nproc ExomiserAnnotation {GeneName what} {\n    \n    global g_Exomiser\n    \n    if {$what eq \"all\"} {\n        # Return all the annotation (EXOMISER_GENE_PHENO_SCORE HUMAN_PHENO_EVIDENCE MOUSE_PHENO_EVIDENCE FISH_PHENO_EVIDENCE) => for gene annotations\n        if {[info exists g_Exomiser($GeneName)]} {\n            return $g_Exomiser($GeneName)\n        } else {\n            return \"-1.0\\t\\t\\t\"\n        }\n    } elseif {$what eq \"score\"} {\n        # Return only the score (EXOMISER_GENE_PHENO_SCORE) => for regulatory elements annotations\n        if {[info exists g_Exomiser($GeneName)]} {\n            return [lindex [split $g_Exomiser($GeneName) \"\\t\"] 0]\n        } else {\n            return \"-1.0\"\n        }\n    } else {\n        puts \"proc ExomiserAnnotation: Bad option value for \\\"what\\\" ($what)\"\n    }\n}\n\n"
  },
  {
    "path": "share/tcl/AnnotSV/AnnotSV-extann.tcl",
    "content": "############################################################################################################\n# AnnotSV 3.5.8                                                                                            #\n#                                                                                                          #\n# AnnotSV: An integrated tool for Structural Variations annotation and ranking                             #\n#                                                                                                          #\n# Copyright (C) 2017-present Veronique Geoffroy (veronique.geoffroy@inserm.fr)                             #\n#                                                                                                          #\n# This is part of AnnotSV source code.                                                                     #\n#                                                                                                          #\n# This program is free software; you can redistribute it and/or                                            #\n# modify it under the terms of the GNU General Public License                                              #\n# as published by the Free Software Foundation; either version 3                                           #\n# of the License, or (at your option) any later version.                                                   #\n#                                                                                                          #\n# This program is distributed in the hope that it will be useful,                                          #\n# but WITHOUT ANY WARRANTY; without even the implied warranty of                                           #\n# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the                                            #\n# GNU General Public License for more details.                                                             #\n#                                                                                                          #\n# You should have received a copy of the GNU General Public License                                        #\n# along with this program; If not, see <http://www.gnu.org/licenses/>.                                     #\n############################################################################################################\n\n\nproc ExternalAnnotations args {\n    \n    # To add external annotation to a gene in particular.\n    # Files used (defined in AnnotSV-main.tcl):\n    # - $g_AnnotSV(annotationsDir)/Annotations_$g_AnnotSV(organism)/Annotations_$g_AnnotSV(organism)/Gene-based/*/*.tsv(.gz)\n    # - $g_AnnotSV(annotationsDir)/Annotations_$g_AnnotSV(organism)/Users/*.tsv(.gz)\n    # - all files given with the -externalGeneFiles option\n    #\n    # Format is tab separated values, 1st line is a header, 1st \"genes\" column is the gene name, rest is free\n    # Typical use would be a gene file containing specific annotations such as tranmission mode, disease, expression...\n    # WARNING: shouldn't contain \"{\" and \"}\". Replaced here by \"(\" and \")\"\n    \n    # args :\n    #   - $F\n    #   - \"L_Files\"    -return-> Annotation files list\n    #   - $F,\"Loaded\"  -return-> 1\n    #   - $F,\"L_ID\"    -return-> List of all genes from $F\n    #   - $F,Header    -return-> Header from $F\n    #   - $F,$ID       -return-> Annotation for $ID (= gene) from $F ([lrange $L 1 end])\n    \n    global g_AnnotSV\n    global g_ExtAnnotation\n    \n    set What [join $args \",\"]\n    if {[info exists g_ExtAnnotation($What)]} {return [set g_ExtAnnotation($What)]}\n    \n    if {[info exists g_AnnotSV(extann)] && $g_AnnotSV(extann) ne \"\"} {\n        set L_Files_Anno {}\n        foreach f [set g_AnnotSV(extann)] {\n            if {[lsearch -exact $L_Files_Anno \"$f\"] eq -1} {\n                lappend L_Files_Anno $f\n            }\n        }\n    } else {return \"\"}\n    \n    if {[file exists [lindex $args 0]]} {\n        set What [join $args \",\"]\n        set L_Files_Anno [lindex $args 0]\n    } else {\n        set What [join [concat [list $L_Files_Anno] $args] \",\"]\n    }\n    \n    #puts \"--args $args\"\n    #puts \"--$L_Files_Anno\"\n    #puts \"--$What\"\n    \n    if {[info exists g_ExtAnnotation($What)]} {return [set g_ExtAnnotation($What)]}\n    foreach File_Anno [lsort $L_Files_Anno] {\n        if {![info exists g_ExtAnnotation($File_Anno,Loaded)]} {\n            \n            if {![info exists g_ExtAnnotation(L_Files)]} {\n                set g_ExtAnnotation(L_Files) {}\n            }\n            lappend g_ExtAnnotation(L_Files) $File_Anno\n            \n            set First 1\n            \n            set NbHeaderColumns 0\n            \n            set g_ExtAnnotation($File_Anno,Loaded) 1\n            \n            lappend g_ExtAnnotation(display) \"\\t\\t...[file tail $File_Anno]\"\n            \n            if {![info exists g_ExtAnnotation($File_Anno,L_ID)]} {\n                set g_ExtAnnotation($File_Anno,L_ID) {}\n            }\n            if {[regexp \".gz$\" $File_Anno]} {\n                set lLines [LinesFromGZFile $File_Anno]\n            } else {\n                set lLines [LinesFromFile $File_Anno]\n            }\n            foreach L $lLines {\n                ## Bug during WritingByGene if \"{ or }\" are presents.\n                ## To be done here, inside each element of the list (not on \"$lLines\").\n                regsub -all \"{\" $L \"(\" L\n                    regsub -all \"}\" $L \")\" L\n                \n                if {! [regexp -nocase {[a-z0-9]+} $L] || [regexp -nocase {^[\\#]} $L]} {continue}\n                \n                if {$First} {\n                    set First 0\n                    if {![regexp -nocase \"gene\" [lindex [split $L \"\\t\"] 0]]} {\n                        puts \"\\t\\tReading $File_Anno:\\n\\tWARNING: Header is present ($L) but does not contain a \\\"gene\\\" named column.\"\n                        set g_ExtAnnotation($File_Anno,Header) \"\"\n                    } else {\n                        set g_ExtAnnotation($File_Anno,Header) $L\n                        set NbHeaderColumns [llength [split $L \"\\t\"]]\n                    }\n                    continue\n                }\n                \n                set Ls [split $L \"\\t\"]\n                set ID [string trim [lindex $Ls 0]]\n                \n                if {[llength $Ls] ne $NbHeaderColumns} {puts \"WARNING: $ID, format (nb columns) is not good [llength $L] vs $NbHeaderColumns columns\"}\n                \n                if {![info exists g_ExtAnnotation($File_Anno,$ID)]} {\n                    lappend g_ExtAnnotation($File_Anno,L_ID) $ID\n                } else {\n                    puts \"WARNING: Reading Annotation file [file tail $File_Anno] and $ID is seen multiple times.\"\n                }\n                \n                set g_ExtAnnotation($File_Anno,$ID) [join [lrange $Ls 1 end] \"\\t\"]\n                \n            }\n            \n            lappend g_ExtAnnotation(display) \"\\t\\t([llength [set g_ExtAnnotation($File_Anno,L_ID)]] gene identifiers and [expr {[llength [split [set g_ExtAnnotation($File_Anno,Header)] \"\\t\"]]-1}] annotations columns: [join [lrange [split [set g_ExtAnnotation($File_Anno,Header)] \"\\t\"] 1 end] \", \"])\"\n            \n            if {[info exists g_ExtAnnotation($What)]} {return [set g_ExtAnnotation($What)]}\n        }\n    }\n    return \"\"\n}\n\n"
  },
  {
    "path": "share/tcl/AnnotSV/AnnotSV-filteredVCF.tcl",
    "content": "############################################################################################################\n# AnnotSV 3.5.8                                                                                            #\n#                                                                                                          #\n# AnnotSV: An integrated tool for Structural Variations annotation and ranking                             #\n#                                                                                                          #\n# Copyright (C) 2017-present Veronique Geoffroy (veronique.geoffroy@inserm.fr)                             #\n#                                                                                                          #\n# This is part of AnnotSV source code.                                                                     #\n#                                                                                                          #\n# This program is free software; you can redistribute it and/or                                            #\n# modify it under the terms of the GNU General Public License                                              #\n# as published by the Free Software Foundation; either version 3                                           #\n# of the License, or (at your option) any later version.                                                   #\n#                                                                                                          #\n# This program is distributed in the hope that it will be useful,                                          #\n# but WITHOUT ANY WARRANTY; without even the implied warranty of                                           #\n# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the                                            #\n# GNU General Public License for more details.                                                             #\n#                                                                                                          #\n# You should have received a copy of the GNU General Public License                                        #\n# along with this program; If not, see <http://www.gnu.org/licenses/>.                                     #\n############################################################################################################\n\n\n\n##########################################################################\n# Example with \"-candidateSnvIndelSamples\" = \"sample1 sample2\"\n# -> Prepare 2 new annotation columns: \"compound-htz($sample1) compound-htz($sample2)\"\n#    = List of htz variants (${chrom}_$pos) presents in the gene overlapped by the SV\n##########################################################################\n\n\nproc filteredVCFannotation {GENEchrom GENEstart GENEend Line headerOutput} {\n    \n    global g_AnnotSV\n    global L_htzPos\n    global L_samplesFromTheHeader\n    \n    if {[regexp -nocase \".bed(.gz)?\" $g_AnnotSV(SVinputFile)]} { ;# <=> SVinputFile is a BED\n        puts \"\\t...WARNING: The compound heterozygosity analysis is not available from a BED SV input file\"\n        puts \"\\t            => That analysis won't be processed!\\n\"\n        set g_AnnotSV(candidateSnvIndelFiles)   \"\"\n        set g_AnnotSV(candidateSnvIndelSamples) \"\"\n        set g_AnnotSV(filteredVCFparsing) \"useless\"\n        return\n    }\n    \n    ## VCFs parsing is done only 1 time (After, g_AnnotSV(filteredVCFparsing) is set to \"done\")\n    if {![info exists g_AnnotSV(filteredVCFparsing)]} {\n        set g_AnnotSV(filteredVCFparsing) \"done\"\n        # parsing of $g_AnnotSV(candidateSnvIndelFiles): creation of L_htzPos($chrom,$sample)\n        puts \"...parsing of candidateSnvIndelFiles for \\\"$g_AnnotSV(candidateSnvIndelSamples)\\\" ([clock format [clock seconds] -format \"%B %d %Y - %H:%M\"])\"\n        \n        # No htz compound for the full lines\n        set L_htzPos(FULL) [lrepeat [llength $g_AnnotSV(candidateSnvIndelSamples)] \"\"]\n        \n        # Check if the GT feature is present for at least 1 variant\n        set GTabsent 1\n        \n        # \"eval glob\" accept regular expression (\"*.vcf) as well as a list of files (\"sample1.vcf sample2.vcf.gz\"):\n        foreach vcfF [eval glob -nocomplain $g_AnnotSV(candidateSnvIndelFiles)] {\n            puts \"\\t...parse all positions from $vcfF ([clock format [clock seconds] -format \"%B %d %Y - %H:%M\"])\"\n            if {[regexp -nocase \".gz$\" $vcfF]} {\n                set f [open \"|gzip -cd $vcfF\"]\n            } else {\n                set f [open \"$vcfF\"]\n            }\n            while {! [eof $f]} {\n                set L [gets $f]\n                if {[string range $L 0 5] eq \"#CHROM\"} {\n                    set L_samplesOkFROMvcfF {}\n                    foreach sample $g_AnnotSV(candidateSnvIndelSamples) {\n                        set i_sample($sample) [lsearch -exact [split $L \"\\t\"] $sample]\n                        if {$i_sample($sample) ne -1} {lappend L_samplesOkFROMvcfF $sample}\n                    }\n                    continue\n                }\n                if {[string index $L 0] eq \"#\" || $L eq \"\"} {continue}\n                # set the variables\n                set Ls [split $L \"\\t\"]\n                set chrom [lindex $Ls 0]\n                regsub -nocase \"chr\" $chrom \"\" chrom\n                set pos [lindex $Ls 1]\n                set filter [lindex $Ls 6]\n                set formatData [lindex $Ls 8]\n                \n                # Consider only the SNV/indel (not the SV in the VCF file)\n                ##########################################################\n                # Example of SV:\n                # - Type1: ref=\"G\" and alt=\"ACTGCTAACGATCCGTTTGCTGCTAACGATCTAACGATCGGGATTGCTAACGATCTCGGG\"\n                # - Type2: \"<INS>\", \"<DEL>\", ...\n                # - Type3: complex rearrangements with breakends: \"G]17:1584563]\"\n                set ref [lindex $Ls 3]\n                set alt [lindex $Ls 4]\n                if {[regexp \"<|\\\\\\[|\\\\\\]\" $alt]} {continue}\n                set variantLength [expr {[string length $ref]-[string length $alt]}]\n                if {[expr {abs($variantLength)}]>$g_AnnotSV(SVminSize)} {continue}; # it is an SV\n                \n                # keep only variant with FILTER == PASS\n                if {$g_AnnotSV(snvIndelPASS) && $filter ne \"PASS\"} {continue}\n                foreach sample $L_samplesOkFROMvcfF {\n                    set sampleData [lindex $Ls $i_sample($sample)]\n                    # set the GT\n                    set j_GT [lsearch -exact [split $formatData \":\"] \"GT\"]\n                    if {$j_GT eq -1} {continue}\n                    set GTabsent 0\n                    set GT \"\"\n                    set GTsample [lindex [split $sampleData \":\"] $j_GT];# GTsample = 0/2 or 0|1 or \"\" or ./.\n                    if {[lindex [split $GTsample \"\\[/|\\]\"] 0] ne [lindex [split $GTsample \"\\[/|\\]\"] 1] && $GTsample ne \"\"} {\n                        lappend L_htzPos($chrom,$sample) \"$pos\"\n                    }\n                }\n            }\n            close $f\n        }\n        if {$GTabsent} {\n            puts \"\\t...WARNING: The SNV/indel genotype is not indicated in the FORMAT column under the “GT” field\"\n            puts \"\\t            => Compound heterozygosity analysis won't be processed!\"\n            set g_AnnotSV(candidateSnvIndelFiles)   \"\"\n            set g_AnnotSV(candidateSnvIndelSamples) \"\"\n        }\n        puts \"\"\n    }\n    \n    set textToReturn {}\n    \n    if {$GENEchrom eq \"FULL\"} {\n        # No annotation for a full line (an SV can overlap several genes)\n        #################################################################\n        set textToReturn \"$L_htzPos(FULL)\"\n    } else {\n        # Annotation of a split line\n        ############################\n        \n        if {![info exists L_samplesFromTheHeader]} {\n            # Done only one time\n            # Listing of all the samples in the VCF input files\n            regsub \".*FORMAT\\t\" $headerOutput \"\" samples\n            regsub \"\\tAnnotation_mode.*\" $samples \"\" samples\n            set L_samplesFromTheHeader [split $samples \"\\t\"]\n        }\n        \n        # SVinputFile is a VCF\n        # Is the SV detected in each sample from $g_AnnotSV(candidateSnvIndelSamples)?\n        # Answer given in the GT of the SV VCF input file (but not from a bedfile)\n        if {[info exists g_AnnotSV(formatColNumber)]} { ;# <=> SVinputFile is a VCF\n            set formatData [lindex $Line $g_AnnotSV(formatColNumber)]\n            set i_gt [lsearch [split $formatData \":\"] \"GT\"]\n            foreach sample $L_samplesFromTheHeader valueSample [lrange $Line [expr {$g_AnnotSV(formatColNumber)+1}] end-13] {\n                set gt [lindex [split $valueSample \":\"] $i_gt]\n                if {[regexp \"\\[1-9\\]\" $gt]} {\n                    set SV($sample) detected\n                }\n            }\n        } else {\n            # SVinputFile is a BED\n            # => no GT information\n            # => SV($sample) has never been defined\n            # => No \"Compound heterozygosity analysis\" (even if asked with the -candidateSnvIndelFiles option)\n        }\n        \n        foreach sample $g_AnnotSV(candidateSnvIndelSamples) {\n            # If the SV is not detected in this sample:\n            if {![info exists SV($sample)]} {lappend textToReturn \"\"; continue}\n            # if $GENEchrom not present in the VCF file:\n            if {![info exists L_htzPos($GENEchrom,$sample)]} {lappend textToReturn \"\"; continue}\n            # List for htz variants\n            set i_first [DichotomySearch $GENEstart $L_htzPos($GENEchrom,$sample)]\n            set i_last [DichotomySearch $GENEend $L_htzPos($GENEchrom,$sample)]\n            if {$GENEstart ne [lindex $L_htzPos($GENEchrom,$sample) $i_first]} {set i_first [expr {$i_first+1}]}\n            set sampleText {}\n            foreach pos [lsort -unique [lrange $L_htzPos($GENEchrom,$sample) $i_first $i_last]] {\n                lappend sampleText \"${GENEchrom}_$pos\"\n            }\n            lappend textToReturn [join $sampleText \";\"]\n        }\n    }\n    \n    return \"[join $textToReturn \"\\t\"]\"\n    \n}\n\n"
  },
  {
    "path": "share/tcl/AnnotSV/AnnotSV-gap.tcl",
    "content": "############################################################################################################\n# AnnotSV 3.5.8                                                                                            #\n#                                                                                                          #\n# AnnotSV: An integrated tool for Structural Variations annotation and ranking                             #\n#                                                                                                          #\n# Copyright (C) 2017-present Veronique Geoffroy (veronique.geoffroy@inserm.fr)                             #\n#                                                                                                          #\n# This is part of AnnotSV source code.                                                                     #\n#                                                                                                          #\n# This program is free software; you can redistribute it and/or                                            #\n# modify it under the terms of the GNU General Public License                                              #\n# as published by the Free Software Foundation; either version 3                                           #\n# of the License, or (at your option) any later version.                                                   #\n#                                                                                                          #\n# This program is distributed in the hope that it will be useful,                                          #\n# but WITHOUT ANY WARRANTY; without even the implied warranty of                                           #\n# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the                                            #\n# GNU General Public License for more details.                                                             #\n#                                                                                                          #\n# You should have received a copy of the GNU General Public License                                        #\n# along with this program; If not, see <http://www.gnu.org/licenses/>.                                     #\n############################################################################################################\n\n\n## - Check if the downloaded \"Gap.bed\" file or the formatted \"*_Gap.sorted.bed\" file exist\nproc checkGapFile {} {\n    \n    global g_AnnotSV\n    \n    ## Check if the gap file has been downloaded then formatted\n    #############################################################\n    set extannDir \"$g_AnnotSV(annotationsDir)/Annotations_$g_AnnotSV(organism)/BreakpointsAnnotations\"\n    set gapFileDownloaded [glob -nocomplain \"$extannDir/Gap/$g_AnnotSV(genomeBuild)/Gap.bed\"]\n    set gapFileFormatted [glob -nocomplain \"$extannDir/Gap/$g_AnnotSV(genomeBuild)/*_Gap.sorted.bed\"]\n    \n    if {$gapFileDownloaded eq \"\" && $gapFileFormatted eq \"\"} {\n        # No Gap annotation\n        set g_AnnotSV(gapAnn) 0\n        return\n    } else {\n        # Gap annotation\n        set g_AnnotSV(gapAnn) 1\n        # Check if the user asked for these annotations in the configfile\n        set test 0\n        foreach col \"Gap_left Gap_right\" {\n            if {[lsearch -exact \"$g_AnnotSV(outputColHeader)\" $col] ne -1} {set test 1;break}\n        }\n        if {$test eq 0} {set g_AnnotSV(gapAnn) 0; return}\n    }\n    \n    if {[llength $gapFileFormatted]>1} {\n        puts \"Several gap files exist:\"\n        puts \"$gapFileFormatted\"\n        puts \"Keep only one: [lindex $gapFileFormatted end]\\n\"\n        foreach gap [lrange $gapFileFormatted 0 end-1] {\n            file rename -force $gap $gap.notused\n        }\n        return\n    }\n    \n    if {$gapFileFormatted eq \"\"} {\n        # The downloaded file exist but not the formatted.\n        set gapFileFormatted \"$extannDir/Gap/$g_AnnotSV(genomeBuild)/[clock format [clock seconds] -format \"%Y%m%d\"]_Gap.sorted.bed\"\n        puts \"\\t...creation of the \\\"[file tail $gapFileFormatted]\\\" file ([clock format [clock seconds] -format \"%B %d %Y - %H:%M\"])\\n\\t   (done only once)\"\n        ReplaceTextInFile \"#Chrom\\tStart\\tEnd\\tGap\" $gapFileFormatted.tmp\n        \n        set f [open $gapFileDownloaded]\n        set i 0\n        set L_Text {}\n        while {![eof $f]} {\n            set L [gets $f]\n            if {$L eq \"\"} {continue}\n            if {[regexp \"^#\" $L]} {continue}\n            \n            set Ls [split $L \"\\t\"]\n            regsub \"chr\" [lindex $Ls 0] \"\" chrom\n            set start [lindex $Ls 1]\n            set end [lindex $Ls 2]\n            set IDgap \"${chrom}:${start}-${end}\"\n            \n            lappend L_Text \"$chrom\\t$start\\t$end\\t$IDgap\"\n            if {$i>500000} {\n                WriteTextInFile [join $L_Text \"\\n\"] $gapFileFormatted.tmp\n                set L_Text {}\n                set i 0\n            }\n            incr i\n        }\n        WriteTextInFile [join $L_Text \"\\n\"] $gapFileFormatted.tmp\n        \n        # Sorting of the bedfile:\n        # Intersection with very large files can cause trouble with excessive memory usage.\n        # A presort of the bed files by chromosome and then by start position combined with the use of the -sorted option will invoke a memory-efficient algorithm.\n        set sortTmpFile \"$g_AnnotSV(outputDir)/[clock format [clock seconds] -format \"%Y%m%d-%H%M%S\"]_[pid]_sort.tmp.bash\"\n        ReplaceTextInFile \"#!/bin/bash\" $sortTmpFile\n        WriteTextInFile \"# The locale specified by the environment can affects the traditional sort order. We need to use native byte values.\" $sortTmpFile\n        WriteTextInFile \"export LC_ALL=C\" $sortTmpFile\n        WriteTextInFile \"sort -k1,1 -k2,2n $gapFileFormatted.tmp > $gapFileFormatted\" $sortTmpFile\n        file attributes $sortTmpFile -permissions 0755\n        if {[catch {eval exec bash $sortTmpFile} Message]} {\n            puts \"-- checkGapFile --\"\n            puts \"sort -k1,1 -k2,2n $gapFileFormatted.tmp > $gapFileFormatted\"\n            puts \"$Message\"\n            puts \"Exit with error\"\n            exit 2\n        }\n        file delete -force $sortTmpFile\n        file delete -force $gapFileFormatted.tmp\n        file delete -force $gapFileDownloaded\n        \n        close $f\n        \n        return\n    }\n}\n\n\n\nproc GapAnnotation {BreakpointChrom BreakpointPos} {\n    \n    global g_AnnotSV\n    global g_Gap_type\n    global g_Gap_coord\n    global g_Gap\n    \n    \n    # headerOutput \"Gap_left\" or \"Gap_right\"\n    # (GapAnnotation is executed for each breakpoint)\n    set g_Gap(Empty) \"\"\n    \n    set extannDir \"$g_AnnotSV(annotationsDir)/Annotations_$g_AnnotSV(organism)/BreakpointsAnnotations\"\n    set gapFileFormatted [glob -nocomplain \"$extannDir/Gap/$g_AnnotSV(genomeBuild)/*_Gap.sorted.bed\"]\n    \n    if {![info exists g_Gap(DONE)]} {\n        \n        # Creation of a bedfile with all breakpoints +/- 100 bp:\n        # => done during the GC content annotation (if \"GC content\" annotation is in the output (user defined))\n        # FORMAT:  chrom   'breakpoint-100'   'breakpoint+100'   'breakpoint'\n        regsub -nocase \"(.formatted)?.bed$\" $g_AnnotSV(bedFile) \".breakpoints.bed\" tmpBreakpointsFile\n        set tmpBreakpointsFile \"$g_AnnotSV(outputDir)/[file tail $tmpBreakpointsFile]\"\n        if {![file exists $tmpBreakpointsFile]} {\n            file delete -force $tmpBreakpointsFile.tmp\n            set i 0\n            set L_LinesToWrite {}\n            set f [open $g_AnnotSV(bedFile)]\n            while {![eof $f]} {\n                set L [gets $f]\n                if {$L eq \"\"} {continue}\n                set Ls [split $L \"\\t\"]\n                set chrom [lindex $Ls 0]\n                set start [lindex $Ls 1]\n                set end [lindex $Ls 2]\n                set start_breakpoint1 [expr $start-100]; if {$start_breakpoint1 < 0} {set start_breakpoint1 0}\n                set end_breakpoint1 [expr $start+100]  ; if {$end_breakpoint1 < 0} {set end_breakpoint1 0}\n                set start_breakpoint2 [expr $end-100]  ; if {$start_breakpoint2 < 0} {set start_breakpoint2 0}\n                set end_breakpoint2 [expr $end+100]    ; if {$end_breakpoint2 < 0} {set end_breakpoint2 0}\n                lappend L_LinesToWrite \"$chrom\\t$start_breakpoint1\\t$end_breakpoint1\\t$start\"\n                lappend L_LinesToWrite \"$chrom\\t$start_breakpoint2\\t$end_breakpoint2\\t$end\"\n                incr i\n                if {$i>100000} {\n                    WriteTextInFile [join [lsort -unique $L_LinesToWrite] \"\\n\"] $tmpBreakpointsFile.tmp\n                    set L_LinesToWrite {}\n                    set i 0\n                }\n            }\n            close $f\n            WriteTextInFile [join [lsort -unique $L_LinesToWrite] \"\\n\"] $tmpBreakpointsFile.tmp\n            unset L_LinesToWrite\n            \n            # Sorting of the bedfile:\n            # Intersection with very large files can cause trouble with excessive memory usage.\n            # A presort of the bed files by chromosome and then by start position combined with the use of the -sorted option will invoke a memory-efficient algorithm.\n            set sortTmpFile \"$g_AnnotSV(outputDir)/[clock format [clock seconds] -format \"%Y%m%d-%H%M%S\"]_[pid]_sort.tmp.bash\"\n            ReplaceTextInFile \"#!/bin/bash\" $sortTmpFile\n            WriteTextInFile \"# The locale specified by the environment can affects the traditional sort order. We need to use native byte values.\" $sortTmpFile\n            WriteTextInFile \"export LC_ALL=C\" $sortTmpFile\n            WriteTextInFile \"sort -k1,1 -k2,2n $tmpBreakpointsFile.tmp > $tmpBreakpointsFile\" $sortTmpFile\n            file attributes $sortTmpFile -permissions 0755\n            if {[catch {eval exec bash $sortTmpFile} Message]} {\n                puts \"-- GapAnnotation, sort --\"\n                puts \"sort -k1,1 -k2,2n $tmpBreakpointsFile.tmp > $tmpBreakpointsFile\"\n                puts \"$Message\"\n                puts \"Exit with error\"\n                exit 2\n            }\n            file delete -force $sortTmpFile\n            file delete -force $tmpBreakpointsFile.tmp\n            \n        }\n        \n        # Intersect\n        regsub -nocase \"(.formatted)?.bed$\" $g_AnnotSV(bedFile) \".intersect.Gap.bed\" tmpGapFile\n        set tmpGapFile \"$g_AnnotSV(outputDir)/[file tail $tmpGapFile]\"\n        file delete -force $tmpGapFile\n        if {[catch {exec $g_AnnotSV(bedtools) intersect -sorted -a $tmpBreakpointsFile -b $gapFileFormatted -wa -wb > $tmpGapFile} Message]} {\n            if {[catch {exec $g_AnnotSV(bedtools) intersect -a $tmpBreakpointsFile -b $gapFileFormatted -wa -wb > $tmpGapFile} Message]} {\n                puts \"-- GapAnnotation, intersect --\"\n                puts \"$g_AnnotSV(bedtools) intersect -sorted -a $tmpBreakpointsFile -b $gapFileFormatted -wa -wb > $tmpGapFile\"\n                puts \"$Message\"\n                puts \"Exit with error\"\n                exit 2\n            }\n        }\n        \n        # Loading g_Gap for each SV breakpoint\n        set f [open $tmpGapFile]\n        while {![eof $f]} {\n            set L [gets $f]\n            if {$L eq \"\"} {continue}\n            set Ls [split $L \"\\t\"]\n            \n            set chrom [lindex $Ls 0]\n            set breakpoint [lindex $Ls 3]\n            #set gapchrom [lindex $Ls 6]\n            #set gapStart [lindex $Ls 5]\n            #set gapEnd [lindex $Ls 6]\n            #set gapCoord [lindex $Ls 7]\n            lappend g_Gap_coord($chrom,$breakpoint) \"[lindex $Ls 7]\"\n        }\n        \n        set g_Gap(DONE) 1\n        file delete -force $tmpGapFile\n    }\n    \n    if {[info exist g_Gap_coord($BreakpointChrom,$BreakpointPos)]} {\n        return \"[join $g_Gap_coord($BreakpointChrom,$BreakpointPos) \";\"]\"\n    } else {\n        return $g_Gap(Empty)\n    }\n}\n\n"
  },
  {
    "path": "share/tcl/AnnotSV/AnnotSV-gccontent.tcl",
    "content": "############################################################################################################\n# AnnotSV 3.5.8                                                                                            #\n#                                                                                                          #\n# AnnotSV: An integrated tool for Structural Variations annotation and ranking                             #\n#                                                                                                          #\n# Copyright (C) 2017-present Veronique Geoffroy (veronique.geoffroy@inserm.fr)                             #\n#                                                                                                          #\n# This is part of AnnotSV source code.                                                                     #\n#                                                                                                          #\n# This program is free software; you can redistribute it and/or                                            #\n# modify it under the terms of the GNU General Public License                                              #\n# as published by the Free Software Foundation; either version 3                                           #\n# of the License, or (at your option) any later version.                                                   #\n#                                                                                                          #\n# This program is distributed in the hope that it will be useful,                                          #\n# but WITHOUT ANY WARRANTY; without even the implied warranty of                                           #\n# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the                                            #\n# GNU General Public License for more details.                                                             #\n#                                                                                                          #\n# You should have received a copy of the GNU General Public License                                        #\n# along with this program; If not, see <http://www.gnu.org/licenses/>.                                     #\n############################################################################################################\n\n\n\n## - Check if the following chromFa files has been downloaded:\n#    - *chromFa.tar.gz\n#\n## - Check and create if necessary the following file:\n#    - 'date'_genomeBuild_chromFa.fasta\n#    - 'date'_genomeBuild_chromFa.chromSizes\nproc checkFASTAfiles {} {\n    \n    global g_AnnotSV\n    \n    ## Check if the FASTA file has been downloaded then formatted\n    ############################################################\n    set extannDir \"$g_AnnotSV(annotationsDir)/Annotations_$g_AnnotSV(organism)/BreakpointsAnnotations\"\n    set FASTAfileDownloaded [glob -nocomplain \"$extannDir/GCcontent/$g_AnnotSV(genomeBuild)/*chromFa.tar.gz\"]\n    set FASTAfileFormatted [glob -nocomplain \"$extannDir/GCcontent/$g_AnnotSV(genomeBuild)/$g_AnnotSV(genomeBuild)_chromFa.fasta\"]\n    \n    if {$FASTAfileDownloaded eq \"\" && $FASTAfileFormatted eq \"\"} {\n        # No GCcontent annotations requested by the user\n        set g_AnnotSV(gcContentAnn) 0\n        return\n    } else {\n        set g_AnnotSV(gcContentAnn) 1\n        # Check if the user asked for these annotations in the configfile\n        set test 0\n        foreach col \"GC_content_left GC_content_right\" {\n            if {[lsearch -exact \"$g_AnnotSV(outputColHeader)\" $col] ne -1} {set test 1;break}\n        }\n        if {$test eq 0} {set g_AnnotSV(gcContentAnn) 0; return}\n    }\n    \n    if {$FASTAfileFormatted eq \"\"} {\n        # The downloaded file exist but not the formatted:\n        updateFASTAfiles\n    }\n}\n\nproc updateFASTAfiles {} {\n    \n    global g_AnnotSV\n    \n    if {[catch {package require tar} Message]} {\n        puts \"Tcl package \\\"tar\\\" is required for GC content annotations.\"\n        puts \"$Message\"\n        puts \"-> no GC content annotations.\\n\"\n        set g_AnnotSV(gcContentAnn) 0\n        return\n    }\n    \n    set extannDir \"$g_AnnotSV(annotationsDir)/Annotations_$g_AnnotSV(organism)/BreakpointsAnnotations\"\n    set FASTAfileDownloaded [glob -nocomplain \"$extannDir/GCcontent/$g_AnnotSV(genomeBuild)/*chromFa.tar.gz\"]\n    set FASTAfileFormatted \"$extannDir/GCcontent/$g_AnnotSV(genomeBuild)/$g_AnnotSV(genomeBuild)_chromFa.fasta\"\n    set ChromSizesFile \"$extannDir/GCcontent/$g_AnnotSV(genomeBuild)/$g_AnnotSV(genomeBuild)_chromFa.chromSizes\"\n    \n    puts \"\\t...GC content configuration ([clock format [clock seconds] -format \"%B %d %Y - %H:%M\"])\"\n    puts \"\\t\\t...creation of $FASTAfileFormatted\"\n    puts \"\\t\\t   (done only once during the first GC content annotation)\"\n    \n    # Extracting files from the .tar.gz file\n    set chan [open \"|gzip -cd $FASTAfileDownloaded\"]\n    ::tar::untar $chan -chan -dir \"$extannDir/GCcontent/$g_AnnotSV(genomeBuild)\"\n    \n    # Merging in a unique file ($FASTAfileFormatted)\n    foreach chrom {1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 X Y M MT} {\n        if {$g_AnnotSV(genomeBuild) eq \"GRCh37\"} {\n            set PathGB \"$g_AnnotSV(genomeBuild)\"\n        } elseif {[regexp \"GRCh38|CHM13\" $g_AnnotSV(genomeBuild)]} {\n            set PathGB \"$g_AnnotSV(genomeBuild)/chroms\"\n        } elseif {$g_AnnotSV(genomeBuild) eq \"mm9\"} {\n            set PathGB \"$g_AnnotSV(genomeBuild)\"\n        } elseif {$g_AnnotSV(genomeBuild) eq \"mm10\"} {\n            set PathGB \"$g_AnnotSV(genomeBuild)\"\n        } elseif {$g_AnnotSV(genomeBuild) eq \"mm39\"} {\n            set PathGB \"$g_AnnotSV(genomeBuild)\"\n        }\n        if {![file exists $extannDir/GCcontent/$PathGB/chr$chrom.fa]} {continue}\n        WriteTextInFile [exec sed \"s/chr//\" $extannDir/GCcontent/$PathGB/chr$chrom.fa] $FASTAfileFormatted\n        if {![regexp \"Y|M\" $chrom]} {\n            set wcValue [exec wc $extannDir/GCcontent/$PathGB/chr$chrom.fa]\n            set nbChars [lindex $wcValue 2]\n            set nLignes [lindex $wcValue 0]\n            # puts \"wcValue $wcValue; nbChars $nbChars; nLignes $nLignes\"\n            WriteTextInFile \"$chrom\\t[expr {$nbChars-$nLignes-[string length \">chr$chrom\"]}]\" $ChromSizesFile ; # Removing of the header and \"\\n\" characters\n            # WARNING for chrY:\n            # >chrY dna:chromosome chromosome:GRCh37:Y:2649521:59034049:1\n            # The chr Y doesn't begin at the 1th position => The length of the sequence doesn't correspond to the length of the chrom Y\n        }\n    }\n    \n    foreach tmpFile [glob -nocomplain \"$extannDir/GCcontent/$PathGB/chr*.fa\"] {\n        file delete -force $tmpFile\n    }\n    file delete -force $extannDir/GCcontent/$g_AnnotSV(genomeBuild)/chroms\n    \n    # index file generation\n    ReplaceTextInFile \"1\\t150000\\t150200\" $extannDir/GCcontent/test.bed\n    catch {exec bedtools nuc -fi $FASTAfileFormatted -bed $extannDir/GCcontent/test.bed} Message\n    file delete -force $extannDir/GCcontent/test.bed\n    \n    file delete -force $FASTAfileDownloaded\n    \n}\n\n\n\nproc GCcontentAnnotation {BreakpointChrom BreakpointPos} {\n    \n    global g_AnnotSV\n    global g_GCcontent\n    \n    \n    # headerOutput \"GC_content_left GC_content_right\"\n    # GCcontentAnnotation is executed for each breakpoint:\n    # - the left breakpoint -> GC_content_left\n    # - the right one -> GC_content_right\n    set g_GCcontent(Empty) \"\" ; # Ok, no \"\\t\" because we return only one value for each procedure call\n    \n    # Checking with the size of the chrom is needed\n    set extannDir \"$g_AnnotSV(annotationsDir)/Annotations_$g_AnnotSV(organism)/BreakpointsAnnotations\"\n    set ChromSizesFile \"$extannDir/GCcontent/$g_AnnotSV(genomeBuild)/$g_AnnotSV(genomeBuild)_chromFa.chromSizes\"\n    foreach L [LinesFromFile $ChromSizesFile] {\n        set sizeOf([lindex $L 0]) [lindex $L 1]\n    }\n    \n    set FASTAfileFormatted [glob -nocomplain \"$extannDir/GCcontent/$g_AnnotSV(genomeBuild)/$g_AnnotSV(genomeBuild)_chromFa.fasta\"]\n    \n    \n    if {![info exists g_GCcontent(DONE)]} {\n        \n        # Creation of a bedfile with all breakpoints +/- 100 bp:\n        # FORMAT:  chrom   'breakpoint-100'   'breakpoint+100'   'breakpoint'\n        regsub -nocase \"(.formatted)?.bed$\" $g_AnnotSV(bedFile) \".breakpoints.bed\" tmpBreakpointsFile\n        set tmpBreakpointsFile \"$g_AnnotSV(outputDir)/[file tail $tmpBreakpointsFile]\"\n        file delete -force $tmpBreakpointsFile.tmp\n        file delete -force $tmpBreakpointsFile\n        set i 0\n        set L_LinesToWrite {}\n        set f [open $g_AnnotSV(bedFile)]\n        while {![eof $f]} {\n            set L [gets $f]\n            if {$L eq \"\"} {continue}\n            set Ls [split $L \"\\t\"]\n            set chrom [lindex $Ls 0]\n            set start [lindex $Ls 1]\n            set end [lindex $Ls 2]\n            set start_breakpoint1 [expr $start-100]; if {$start_breakpoint1 < 0} {set start_breakpoint1 0}\n            set end_breakpoint1 [expr $start+100]  ; if {$end_breakpoint1 < 0} {set end_breakpoint1 0}\n            if {[info exists sizeOf($chrom)] && $end_breakpoint1 > $sizeOf($chrom)} {\n                # The start of the SV is near to the end of the chromosome\n                if {$start_breakpoint1 < $sizeOf($chrom)} {\n                    set end_breakpoint1 $sizeOf($chrom)\n                }\n            }\n            set start_breakpoint2 [expr $end-100]  ; if {$start_breakpoint2 < 0} {set start_breakpoint2 0}\n            set end_breakpoint2 [expr $end+100]    ; if {$end_breakpoint2 < 0} {set end_breakpoint2 0}\n            if {[info exists sizeOf($chrom)] && $end_breakpoint2 > $sizeOf($chrom)} {\n                # The end of the SV corresponds (or is near) to the end of the chromosome\n                if {$start_breakpoint2 < $sizeOf($chrom)} {\n                    set end_breakpoint2 $sizeOf($chrom)\n                }\n            }\n            \n            lappend L_LinesToWrite \"$chrom\\t$start_breakpoint1\\t$end_breakpoint1\\t$start\"\n            lappend L_LinesToWrite \"$chrom\\t$start_breakpoint2\\t$end_breakpoint2\\t$end\"\n            incr i\n            if {$i>100000} {\n                WriteTextInFile [join [lsort -unique $L_LinesToWrite] \"\\n\"] $tmpBreakpointsFile.tmp\n                set L_LinesToWrite {}\n                set i 0\n            }\n        }\n        close $f\n        WriteTextInFile [join [lsort -unique $L_LinesToWrite] \"\\n\"] $tmpBreakpointsFile.tmp\n        unset L_LinesToWrite\n        \n        # Sorting of the bedfile\n        if {[catch {exec $g_AnnotSV(bedtools) sort -i $tmpBreakpointsFile.tmp > $tmpBreakpointsFile} Message]} {\n            puts \"-- GCcontentAnnotation, sort --\"\n            puts \"$g_AnnotSV(bedtools) sort -i $tmpBreakpointsFile.tmp > $tmpBreakpointsFile\"\n            puts \"$Message\"\n        }\n        file delete -force $tmpBreakpointsFile.tmp\n        \n        # Intersect\n        regsub -nocase \"(.formatted)?.bed$\" $g_AnnotSV(bedFile) \".GCcontent.txt\" tmpNucFile\n        set tmpNucFile \"$g_AnnotSV(outputDir)/[file tail $tmpNucFile]\"\n        file delete -force $tmpNucFile\n        if {[catch {exec $g_AnnotSV(bedtools) nuc -fi $FASTAfileFormatted -bed $tmpBreakpointsFile > $tmpNucFile} Message]} {\n            if {$Message ne \"Warning: the index file is older than the FASTA file.\"} {\n                puts \"-- GCcontentAnnotation, nuc --\"\n                puts \"$g_AnnotSV(bedtools) nuc -fi $FASTAfileFormatted -bed $tmpBreakpointsFile > $tmpNucFile\"\n                puts \"$Message\"\n            }\n        }\n        # file delete -force $tmpBreakpointsFile; \"tmpBreakpointsFile\" is used later for the other breakpoints annotation!\n        \n        # Loading g_GCcontent for each SV breakpoint\n        set f [open $tmpNucFile]\n        while {![eof $f]} {\n            set L [gets $f]\n            if {$L eq \"\"} {continue}\n            set Ls [split $L \"\\t\"]\n            if {[regexp \"_pct_gc\" $L]} {\n                set i_gc [lsearch -regexp $Ls \"_pct_gc\"]\n                set i_n [lsearch -regexp $Ls \"_num_N\"]\n                set i_oth [lsearch -regexp $Ls \"_num_oth\"]\n                continue\n            }\n            set chrom [lindex $Ls 0]\n            set breakpoint [lindex $Ls 3]\n            set gcPercent [format \"%.3f\" [lindex $Ls $i_gc]]\n            set numN [lindex $Ls $i_n]\n            set numOth [lindex $Ls $i_oth]\n            # Change metrics from \".\" to \",\"\n            if {[set g_AnnotSV(metrics)] eq \"fr\"} {\n                regsub -all {\\.} $gcPercent \",\" gcPercent\n            }\n            set g_GCcontent($chrom,$breakpoint) $gcPercent\n            if {$numN ne \"0\"} {\n                if {$numOth ne \"0\"} {append g_GCcontent($chrom,$breakpoint) \" ($numN N, $numOth Oth)\"} else {append g_GCcontent($chrom,$breakpoint) \" ($numN N)\"}\n            } elseif {$numOth ne \"0\"} {append g_GCcontent($chrom,$breakpoint) \" ($numOth Oth)\"}\n        }\n        \n        set g_GCcontent(DONE) 1\n        file delete -force $tmpNucFile\n    }\n    \n    if {[info exist g_GCcontent($BreakpointChrom,$BreakpointPos)]} {\n        return $g_GCcontent($BreakpointChrom,$BreakpointPos)\n    } else {\n        return $g_GCcontent(Empty)\n    }\n}\n\n"
  },
  {
    "path": "share/tcl/AnnotSV/AnnotSV-gencc.tcl",
    "content": "############################################################################################################\n# AnnotSV 3.5.8                                                                                            #\n#                                                                                                          #\n# AnnotSV: An integrated tool for Structural Variations annotation and ranking                             #\n#                                                                                                          #\n# Copyright (C) 2017-present Veronique Geoffroy (veronique.geoffroy@inserm.fr)                             #\n#                                                                                                          #\n# This is part of AnnotSV source code.                                                                     #\n#                                                                                                          #\n# This program is free software; you can redistribute it and/or                                            #\n# modify it under the terms of the GNU General Public License                                              #\n# as published by the Free Software Foundation; either version 3                                           #\n# of the License, or (at your option) any later version.                                                   #\n#                                                                                                          #\n# This program is distributed in the hope that it will be useful,                                          #\n# but WITHOUT ANY WARRANTY; without even the implied warranty of                                           #\n# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the                                            #\n# GNU General Public License for more details.                                                             #\n#                                                                                                          #\n# You should have received a copy of the GNU General Public License                                        #\n# along with this program; If not, see <http://www.gnu.org/licenses/>.                                     #\n############################################################################################################\n\n\n\n\n### GenCC\n#####################################\n# GenCC downloaded file: https://search.thegencc.org/download/action/submissions-export-tsv\n#\n# Header:\n# \"uuid\",\"gene_curie\",\"gene_symbol\",\"disease_curie\",\"disease_title\",\"disease_original_curie\",\"disease_original_title\",\"classification_curie\",\"classification_title\",\"moi_curie\",\"moi_title\",\"submitter_curie\",\"submitter_title\",\"submitted_as_hgnc_id\",\"submitted_as_hgnc_symbol\",\"submitted_as_disease_id\",\"submitted_as_disease_name\",\"submitted_as_moi_id\",\"submitted_as_moi_name\",\"submitted_as_submitter_id\",\"submitted_as_submitter_name\",\"submitted_as_classification_id\",\"submitted_as_classification_name\",\"submitted_as_date\",\"submitted_as_public_report_url\",\"submitted_as_notes\",\"submitted_as_pmids\",\"submitted_as_assertion_criteria_url\",\"submitted_as_submission_id\",\"submitted_run_date\"\n\n## - Check if the following GenCC file has been downloaded:\n#    - submissions-export-tsv\n#\n## - Check and create if necessary the following file:\n#    - 'date'_GenCC.sorted.tsv.gz\nproc checkGenCCgeneFile {} {\n    \n    global g_AnnotSV\n    \n    ## Check if the \"GenCC gene\" file has been downloaded then formatted\n    #################################################################\n    set extannDir \"$g_AnnotSV(annotationsDir)/Annotations_$g_AnnotSV(organism)/Gene-based\"\n    set GenCCfileDownloaded [glob -nocomplain \"$extannDir/GenCC/submissions-export-tsv\"]\n    set GenCCfileFormattedGzip [glob -nocomplain \"$extannDir/GenCC/*_GenCC.tsv\" \"$extannDir/GenCC/*_GenCC.tsv.gz\"]\n    \n    if {$GenCCfileDownloaded eq \"\" && $GenCCfileFormattedGzip eq \"\"} {\n        # No \"GenCC gene\" annotation (with extAnn procedure)\n        return\n    }\n    \n    if {[llength $GenCCfileFormattedGzip]>1} {\n        puts \"Several GenCC files exist:\"\n        puts \"$GenCCfileFormattedGzip\"\n        puts \"Keep only one: [lindex $GenCCfileFormattedGzip end]\\n\"\n        foreach gencc [lrange $GenCCfileFormattedGzip 0 end-1] {\n            file rename -force $gencc $gencc.notused\n        }\n        return\n    }\n    \n    if {$GenCCfileFormattedGzip eq \"\"} {\n        # The downloaded file exist but not the formatted.\n        ## Create : 'date'_GenCC.tsv.gz\n        updateGenCCgeneFile\n    }\n}\n\nproc updateGenCCgeneFile {} {\n    \n    global g_AnnotSV\n    \n    if {[catch {package require csv} Message]} {\n        puts \"Tcl package \\\"csv\\\" is required for GenCC gene annotations.\"\n        puts \"$Message\"\n        puts \"-> no GenCC gene annotations.\\n\"\n        # No \"GenCC gene\" annotation (with extAnn procedure)\n        return\n    }\n    \n    set extannDir \"$g_AnnotSV(annotationsDir)/Annotations_$g_AnnotSV(organism)/Gene-based\"\n    set GenCCfileDownloaded [glob -nocomplain \"$extannDir/GenCC/submissions-export-tsv\"]\n    \n    ## Create : 'date'_GenCC.tsv.gz\n    set GenCCfileFormatted \"$extannDir/GenCC/[clock format [clock seconds] -format \"%Y%m%d\"]_GenCC.tsv\"\n    \n    puts \"\\t...GenCC genes configuration\"\n    puts \"\\t\\t...creation of $GenCCfileFormatted.gz\"\n    puts \"\\t\\t   (done only once during the first GenCC annotation)\"\n    \n    set TexteToWrite {genes\\tGenCC_disease\\tGenCC_moi\\tGenCC_classification\\tGenCC_pmid}\n    foreach L [LinesFromFile $GenCCfileDownloaded] {\n        if {[regexp  \"^\\\"uuid\" $L]} {\n            set ntext \"field not found - Exit with error\"\n            set Ls [::csv::split $L \"\\t\"]\n            set i_gene    [lsearch -regexp $Ls \"gene_symbol\"];         if {$i_gene == -1} {puts \"Bad syntax into $GenCCfileDownloaded.\\ngene_symbol $ntext\"; exit 2}\n            set i_disease [lsearch -regexp $Ls \"disease_title\"];       if {$i_disease == -1} {puts \"Bad syntax into $GenCCfileDownloaded.\\ndisease_title $ntext\"; exit 2}\n            set i_moi     [lsearch -regexp $Ls \"moi_title\"];           if {$i_moi == -1} {puts \"Bad syntax into $GenCCfileDownloaded.\\nmoi_title $ntext\"; exit 2}\n            set i_classif [lsearch -regexp $Ls \"classification_title\"]; if {$i_classif == -1} {puts \"Bad syntax into $GenCCfileDownloaded.\\nclassification_title $ntext\"; exit 2}\n            set i_pmid    [lsearch -regexp $Ls \"submitted_as_pmids\"];  if {$i_pmid == -1} {puts \"Bad syntax into $GenCCfileDownloaded.\\nsubmitted_as_pmids $ntext\"; exit 2}\n            continue\n        }\n        set Ls [::csv::split $L \"\\t\"]\n        \n        set gene [lindex $Ls $i_gene]\n        lappend L_genes \"$gene\"\n        set disease [lindex $Ls $i_disease]\n        set moi [lindex $Ls $i_moi]\n        set classif [lindex $Ls $i_classif]\n        set pmid [lindex $Ls $i_pmid]\n        \n        # 05/09/2024 - Issue #250 (bad GenCC file)\n        # 04/28/2025 - Bug always present:\n        #   DHX9    \"   AD  Strong  37369308;37467750\n        #   FLVCR1  \";FLVCR1-related retinopathy with or without ataxia;posterior column ataxia-retinitis pigmentosa syndrome   AR  ...\n        # $disease should not be equal to \"\\\"\"\n        if {$disease ne \"\" && $disease ne \"\\\"\"} {\n            lappend L_disease($gene) \"$disease\"\n        }\n        if {[regexp -nocase \"Autosomal dominant\" $moi]} {\n            if {[regexp -nocase \"with maternal imprinting\" $moi]} {\n                set moi \"ADm\"\n            } elseif {[regexp -nocase \"with paternal imprinting\" $moi]} {\n                set moi \"ADp\"\n            } else {\n                set moi \"AD\"\n            }\n        } elseif {[regexp -nocase \"Autosomal recessive\" $moi]} {\n            set moi \"AR\"\n        } elseif {[regexp -nocase \"Digenic\" $moi]} {\n            set moi \"2G\"\n        } elseif {[regexp -nocase \"Mitochondrial\" $moi]} {\n            set moi \"MT\"\n        } elseif {[regexp -nocase \"Semidominant\" $moi]} {\n            set moi \"sD\"\n        } elseif {[regexp -nocase \"Somatic mosaicism\" $moi]} {\n            set moi \"SOM\"\n        } elseif {[regexp -nocase \"X-linked\" $moi]} {\n            if {[regexp -nocase \"dominant\" $moi]} {\n                set moi \"XLD\"\n            } elseif {[regexp -nocase \"recessive\" $moi]} {\n                set moi \"XLR\"\n            } else {\n                set moi \"XL\"\n            }\n        } elseif {[regexp -nocase \"Y-linked\" $moi]} {\n            if {[regexp -nocase \"dominant\" $moi]} {\n                set moi \"YLD\"\n            } elseif {[regexp -nocase \"recessive\" $moi]} {\n                set moi \"YLR\"\n            } else {\n                set moi \"YL\"\n            }\n        } else {\n            set moi \"\"\n        }\n        \n        if {$moi ne \"\"} {\n            lappend L_moi($gene) \"$moi\"\n            #lappend all_moi $moi ;# To use during the annotation update (and see if new moi is used by GenCC)\n            if {[regexp -nocase \"incomplete penetrance|Reduced penetrance\" $L]} {\n                lappend L_moi($gene) \"IPVE\"\n            }\n        }\n        if {$classif ne \"\" && $classif ne \"\\\"\"} {\n            lappend L_classif($gene) \"$classif\"\n        }\n        regsub -all \"\\\"\" $pmid \"\" pmid\n        if {$pmid ne \"\"} {\n            regsub -all \" ,\" $pmid \";\" pmid\n            regsub -all \",\" $pmid \";\" pmid\n            regsub -all \" \" $pmid \";\" pmid\n            foreach p [split \"$pmid\" \";\"] {\n                if {$p eq 0} {continue}\n                if {$p eq \"\"} {continue}\n                lappend L_pmid($gene) $p\n            }\n        }\n    }\n    #puts [join [lsort -unique $all_moi] \"\\n\"]; exit\n    \n    # Write outputfile (will be used as external annotation)\n    set L_genes [lsort -unique $L_genes]\n    puts \"\\t\"\n    foreach gene $L_genes {\n        if {![isARefSeqGeneName $gene] && ![isAnENSEMBLgeneName $gene]} {continue}\n        if {[info exists L_disease($gene)]}   {set a [join [lsort -unique $L_disease($gene)] \";\"]}  else {set a \"\"}\n        if {[info exists L_moi($gene)]}       {set b [join [lsort -unique $L_moi($gene)] \";\"]}      else {set b \"\"}\n        if {[info exists L_classif($gene) ]}  {set c [join [lsort -unique $L_classif($gene) ] \";\"]} else {set c \"\"}\n        if {[info exists L_pmid($gene)]}      {set d [join [lsort -unique $L_pmid($gene)] \";\"]}     else {set d \"\"}\n        \n        set L_toWrite \"$gene\\t$a\\t$b\\t$c\\t$d\"\n        lappend TexteToWrite $L_toWrite\n    }\n    \n    WriteTextInFile [join $TexteToWrite \"\\n\"] $GenCCfileFormatted\n    if {[catch {exec gzip $GenCCfileFormatted} Message]} {\n        puts \"-- updateGenCCgeneFile --\"\n        puts \"gzip $GenCCfileFormatted\"\n        puts \"$Message\\n\"\n    }\n    \n    file delete -force $GenCCfileDownloaded\n}\n\n"
  },
  {
    "path": "share/tcl/AnnotSV/AnnotSV-general.tcl",
    "content": "############################################################################################################\n# AnnotSV 3.5.8                                                                                            #\n#                                                                                                          #\n# AnnotSV: An integrated tool for Structural Variations annotation and ranking                             #\n#                                                                                                          #\n# Copyright (C) 2017-present Veronique Geoffroy (veronique.geoffroy@inserm.fr)                             #\n#                                                                                                          #\n# This is part of AnnotSV source code.                                                                     #\n#                                                                                                          #\n# This program is free software; you can redistribute it and/or                                            #\n# modify it under the terms of the GNU General Public License                                              #\n# as published by the Free Software Foundation; either version 3                                           #\n# of the License, or (at your option) any later version.                                                   #\n#                                                                                                          #\n# This program is distributed in the hope that it will be useful,                                          #\n# but WITHOUT ANY WARRANTY; without even the implied warranty of                                           #\n# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the                                            #\n# GNU General Public License for more details.                                                             #\n#                                                                                                          #\n# You should have received a copy of the GNU General Public License                                        #\n# along with this program; If not, see <http://www.gnu.org/licenses/>.                                     #\n############################################################################################################\n\n\nproc DescendingSortOnElement0 {X Y {N 0}} {\n    return [expr {[lindex $X $N]<[lindex $Y $N]}]\n}\nproc DescendingSortOnElement1 {X Y {N 1}} {\n    return [expr {[lindex $X $N]<[lindex $Y $N]}]\n}\nproc DescendingSortOnElement2 {X Y {N 2}} {\n    return [expr {[lindex $X $N]<[lindex $Y $N]}]\n}\nproc AscendingSortOnElement0 {X Y {N 0}} {\n    return [expr {[lindex $X $N]>[lindex $Y $N]}]\n}\nproc AscendingSortOnElement1 {X Y {N 1}} {\n    return [expr {[lindex $X $N]>[lindex $Y $N]}]\n}\nproc AscendingSortOnElement2 {X Y {N 2}} {\n    return [expr {[lindex $X $N]>[lindex $Y $N]}]\n}\nproc AscendingSortOnElement4 {X Y {N 4}} {\n    return [expr {[lindex $X $N]>[lindex $Y $N]}]\n}\nproc AscendingSortOnElement5 {X Y {N 5}} {\n    return [expr {[lindex $X $N]>[lindex $Y $N]}]\n}\n\n##############################################################################\n#                          WORKING WITH FILES\n##############################################################################\nproc FirstLineFromFile {{File \"\"}} {\n    \n    if {[regexp \".gz$\" $File]} {\n        set F [open \"|gzip -cd $File\"]\n    } else {\n        set F [open \"$File\"]\n    }\n    \n    set L_Lines {}\n    set First 1\n    \n    while {[gets $F Line]>=0} {\n        if {$First} {set First 0;break}\n    }\n    \n    return $Line\n}\n\nproc ContentFromFile {{File \"\"}} {\n    if {[string equal $File \"\"]} {return \"\"}\n    set f     [open $File r]\n    set Text [read -nonewline $f]\n    close $f\n    return $Text\n}\n\nproc LinesFromFile {{File \"\"}} {\n    return [split [ContentFromFile $File] \"\\n\"]\n}\n\nproc ContentFromGZFile {{File \"\"}} {\n    if {[string equal $File \"\"]} {return \"\"}\n    set f     [open \"|gzip -cd $File\" r]\n    set Texte [read -nonewline $f]\n    close $f\n    return $Texte\n}\n\nproc LinesFromGZFile {{File \"\"}} {\n    return [split [ContentFromGZFile $File] \"\\n\"]\n}\n\nproc ReplaceTextInFile {NewText fichier} {\n    set    fifi [open $fichier w]\n    puts  $fifi $NewText\n    close $fifi\n    return 1\n}\n\n\nproc WriteTextInFile {text fichier} {\n    set    fifi [open $fichier a]\n    puts  $fifi $text\n    close $fifi\n    return 1\n}\n\n\n\n##############################################################################\n#                          Settings of the annotSV_ID\n##############################################################################\n\n# INPUT: \"${chrom}_${pos}_${end}_${svtype}\" \"$ref\" \"$alt\"\n# For <INS>: alt = \"alt_insertedseq\" or \"alt_svlen\"\n# For <TRA>: alt = \"alt_chr2_end\"\nproc settingOfTheAnnotSVID {deb ref alt} {\n    global g_ID\n    global g_deb\n    \n    set result [split [removeREFinBracketedALT $ref $alt] \"\\t\"]\n    set ref [lindex $result 0]\n    set alt [lindex $result 1]\n    \n    if {![info exists g_ID($deb,$ref,$alt)]} {\n        set i 1\n        while {[info exists g_deb(${deb}_$i)]} {incr i; continue}\n        set g_deb(${deb}_$i) \"1\"\n        set g_ID($deb,$ref,$alt) \"${deb}_$i\"\n    }\n    \n    return $g_ID($deb,$ref,$alt)\n}\n\n\n# - Remove the REF from the bracketed ALT\n# - Replace \"][\" with \";\"\nproc removeREFinBracketedALT {ref alt} {\n    # Used only for square-bracketed SV:\n    # => because for BND rescue, the REF is replaced by \"N\".\n    # => a new AnnotSV_ID would be attribute to the BND rescue, even if the 1st BND exists)\n    #\n    # Examples:\n    # INS: T TAAAA[13:5000[ => N NAAAA[13:5000[\n    # INS: T ]13:5000]AAAAT => N ]13:5000]AAAAN\n    # DEL: T ]22:3000]A => N ]22:3000]N\n    if {[regexp \"(\\[acgtnACGTN\\]*)(\\\\\\[|\\\\\\])(\\[^:\\]+):(\\[0-9\\]+)(\\\\\\[|\\\\\\])(\\[acgtnACGTN\\]*)\" $alt match baseLeft bracketLeft inBracketChrom inBracketStart bracketRight baseRight]} {\n        if {[string length $baseLeft] > 1 } {\n            # INS, keep the inserted seq\n            regsub -nocase \"^$ref\" $baseLeft \"\" baseLeft\n        } elseif {[string length $baseRight] > 1} {\n            # INS, keep the inserted seq\n            regsub -nocase \"$ref$\" $baseRight \"\" baseRight\n        } else {\n            # Not INS, remove REF from ALT\n            set baseLeft \"\"\n            set baseRight \"\"\n        }\n        set alt \"$baseLeft$bracketLeft${inBracketChrom}:$inBracketStart$bracketRight$baseRight\"\n        \n        # L_squBrack_SV_ID_Written (VCFsToBED): lappend add \"\\\" before \"]\" => we remove all []\n        regsub -all \"\\\\\\]|\\\\\\[\" \"$alt\" \";\" alt\n        \n        # REF is included in bracketed ALT. No need to compare for AnnotSV_ID (else, bug because REF can be replace by \"N\" for the BND rescue)\n        set ref \"\"\n    }\n    \n    return \"$ref\\t$alt\"\n}\n\n\n##############################################################################\n#                          WORKING WITH rsID\n##############################################################################\n\nproc isNotAnRS {rs} {\n    if {[regexp \"^rs\\[0-9\\]+$\" $rs]} {return 0} else {return 1}\n}\n\n##############################################################################\n#                     WORKING WITH ANNOTATION LIST\n##############################################################################\n\n# Example:\n# 1 annotation file (F1) with 2 annotation columns (C1 and C2) by gene\n# (numberOfAnnCol = 2)\n#\n# Input (= a list):\n# -----------------\n# Annotations for the gene1: g1C1 g1C2\n# Annotations for the gene2: g2C1 g2C2\n# Annotations for the gene3:  \"\"   \"\"\n\n# <=> Input = L_ann = {g1C1\\tg1C2} {g2C1\\tg2C2}} {\\t}\n#\n# Output (= a tsv text):\n# ----------------------\n# Annotation desired for g1;g2;g3:\n# <=> Output = L_newAnn = \"g1C1;g2C1;g3C1\\tg1C2;g2C2;g3C2\"\n#\nproc MergeAnnotation {L_ann numberOfannCol} {\n\n# There is only one gene annotation => no need to merge\nif {[llength $L_ann] eq 1} {\n    return [join $L_ann]\n}\n\n# Merge genes annotations\nset g 0\nset L_ig {}\nforeach geneAnn $L_ann {          ;# geneAnn = g1C1\\tg1C2\n    lappend L_ig $g\n    if {$geneAnn eq \"\"} {\n        set tann($g,0) \"\" ; # With 1 annotation column: An empty string can not be split and can not return a colAnn value => don't enter in the following foreach\n    } else {\n        set c 0\n        foreach colAnn [split $geneAnn \"\\t\"] {    ;# colAnn = g1C1\n            set tann($g,$c) $colAnn               ;# tann($g,$c) = g1C1\n            incr c\n        }\n    }\n    incr g\n}\nset L_newAnn {}\nset c 0\nwhile {$c < $numberOfannCol} {\n    set annByCol \"\"\n    foreach g $L_ig {\n        lappend annByCol $tann($g,$c)\n    }\n    incr c\n    set 1ann [join $annByCol \";\"]\n    regsub -all \";;+\" $1ann \";\" 1ann\n    regsub \"^;\" $1ann \"\" 1ann\n    regsub \";$\" $1ann \"\" 1ann\n    lappend L_newAnn $1ann\n}\nset toreturn [join $L_newAnn \"\\t\"]\n\nreturn $toreturn\n}\n\n\nproc RemoveRedundancyWithoutSorting {List} {\nset newList {}\nforeach element $List {\n    if {[lsearch -exact $newList \"$element\"] eq -1} {\n        lappend newList $element\n    }\n}\nreturn $newList\n}\n\n\n\n##############################################################################\n#                          WORKING WITH SV TYPE\n##############################################################################\n\nproc normalizeSVtype {SVtype} {\n\n# SVtype in which category: DUP? DEL? INV? INS? \"\"?\nif {[regexp -nocase \"del|loss|<CN0>|<CN1>\" $SVtype]} {\n    set SVtype \"DEL\"\n} elseif {[regexp -nocase \"dup|gain|MCNV\" $SVtype ]} {\n    set SVtype \"DUP\"\n} elseif {[regexp -nocase \"<CN(\\[0-9\\]+)>\" $SVtype match i]} {\n    if {$i>1} {set SVtype \"DUP\"}\n} elseif {[regexp -nocase \"inv\" $SVtype]} {\n    set SVtype \"INV\"\n} elseif {[regexp -nocase \"ins|MEI|alu|line|sva\" $SVtype]} { ;# \"DEL_ALU\" is set to \"DEL\", OK!\n    set SVtype \"INS\"\n} elseif {[regexp -nocase \"TRA|TRN\" $SVtype ]} {\n    set SVtype \"TRA\"\n} else {\n    set SVtype \"\"\n}\n\nreturn $SVtype\n}\n\n##############################################################################\n#                          WORKING WITH bedFile\n##############################################################################\n\n# - Create a formatted file (*.formatted.bed)\n# - If the bed file is located in the \"Users\" directory, create also a *.header.tsv file (if it doesn't exist yet)\nproc checkBed {bedFile {bedDir \"\"} {mergeOverlap 0}} {\n\nglobal g_AnnotSV\n\nregsub -nocase \".bed$\" $bedFile \".formatted.bed\" newBed\nif {$bedDir eq \"\"} {\n    set newBed \"$g_AnnotSV(outputDir)/[file tail $newBed]\"\n} else {\n    set newBed \"$bedDir/[file tail $newBed]\"\n}\n\nif {[file exists $newBed]} {return 1}\n\n# Bedfile should be sorted, should not have \"chr\" in the first column, should not have 2 identical lines\n##############################################################################################################################################\n# If mergeOverlap is set to 1, should not have overlapping lines\n\n# Removing non-standard contigs (other than the standard 1-22,X,Y,MT) and remove \"chr\" if present\n# Check that the length is the same in each line of the bed file\nset f [open $bedFile]\nset test 0\nset L_length {}\nset header \"\"\nwhile {![eof $f]} {\n    set L [gets $f]\n    if {$L eq \"\"} {continue}\n    # For each tab separated value, any leading or trailing white space is removed\n    set Ls [split $L \"\\t\"]\n    set newLs \"\"\n    foreach val $Ls {\n        lappend newLs [string trim $val]\n    }\n    set L [join $newLs \"\\t\"]\n    \n    if {[regexp \"^#\" $L]} {set header $L; continue}\n    if {[regsub \"chr\" [lindex $L 0] \"\" chrom] ne 0} {\n        lappend L_Text($chrom) \"[string range $L 3 end]\"\n    } else {\n        lappend L_Text($chrom) \"$L\"\n    }\n    lappend L_length [llength [split $L \"\\t\"]]\n}\nclose $f\n\n# With or without annotations?\nset L_length [lsort -unique $L_length]\nif {[llength $L_length] ne 1} {\n    puts \"$bedFile: Unexpected file format, not the same length for each line.\"\n    puts \"\\t-> not using the associated annotations\"\n    set UseAnn 0\n} else {\n    if {$L_length > 3} {set UseAnn 1} else {set UseAnn 0}\n}\n\n# Creation of the *.header.tsv file (if the bed file is located in the \"Users\" directory)\nif {[regexp \"/Users/\" $bedFile]} {\n    regsub -nocase \"(.formatted)?.bed$\" $bedFile \".header.tsv\" userHeaderFile\n    if {![file exists $userHeaderFile]} {\n        if {[llength [split $header \"\\t\"]] eq $L_length} {\n            WriteTextInFile $header $userHeaderFile\n        } else {\n            WriteTextInFile \"[join [lrepeat $L_length \"\"] \"\\t\"]\" $userHeaderFile\n        }\n    }\n}\n\nforeach chrom {1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 X Y M MT} {\n    if {![info exists L_Text($chrom)]} {continue}\n    \n    ## Remove identical lines (due to liftover_to_hg19 for example)\n    set L_Text($chrom) [lsort -unique $L_Text($chrom)]\n    \n    ## Put in karyotypic order\n    set L_Text($chrom) [lsort -command AscendingSortOnElement1 [lsort -command AscendingSortOnElement2 $L_Text($chrom)]]\n    \n    if {$mergeOverlap} {\n        ## Merge overlapping lines\n        set L_newText {}\n        set Ls [split [lindex $L_Text($chrom) 0] \"\\t\"]\n        set previousStart [lindex $Ls 1]\n        set previousEnd [lindex $Ls 2]\n        if {$UseAnn} {\n            set j 3\n            while {$j < $L_length} {\n                set previousAnnotations($j) \"[lindex $Ls $j]\"\n                incr j\n            }\n        }\n        foreach L [lrange $L_Text($chrom) 1 end] {\n            set Ls [split $L \"\\t\"]\n            set start [lindex $Ls 1]\n            set end [lindex $Ls 2]\n            if {$UseAnn} {\n                set j 3\n                while {$j < $L_length} {\n                    set annotations($j) \"[lindex $Ls $j]\"\n                    incr j\n                }\n            }\n            if {$start < $previousEnd} {\n                if {$end > $previousEnd} {set previousEnd $end}\n                if {$UseAnn} {\n                    set j 3\n                    while {$j < $L_length} {\n                        set previousAnnotations($j) \"$previousAnnotations($j)/$annotations($j)\"\n                        incr j\n                    }\n                }\n            } else {\n                if {$UseAnn} {\n                    set n \"$chrom\\t$previousStart\\t$previousEnd\"\n                    set j 3\n                    while {$j < $L_length} {\n                        append n \"\\t$previousAnnotations($j)\"\n                        incr j\n                    }\n                    lappend L_newText \"$n\"\n                } else {\n                    lappend L_newText \"$chrom\\t$previousStart\\t$previousEnd\"\n                }\n                set previousStart $start\n                set previousEnd $end\n                set j 3\n                while {$j < $L_length} {\n                    set previousAnnotations($j) \"$annotations($j)\"\n                    incr j\n                }\n            }\n        }\n        # Treatment of the last line(s)\n        if {$UseAnn} {\n            set n \"$chrom\\t$previousStart\\t$previousEnd\"\n            set j 3\n            while {$j < $L_length} {\n                append n \"\\t$previousAnnotations($j)\"\n                incr j\n            }\n            lappend L_newText \"$n\"\n        } else {\n            lappend L_newText \"$chrom\\t$previousStart\\t$previousEnd\"\n        }\n    }\n    \n    ## Write the formatted bedfile\n    if {$mergeOverlap} {\n        WriteTextInFile [join $L_newText \"\\n\"] $newBed\n    } else {\n        WriteTextInFile [join $L_Text($chrom) \"\\n\"] $newBed\n    }\n    unset L_Text($chrom)\n}\nfile delete -force $bedFile\n\n\nreturn $newBed\n}\n\n\n\n# Check if a bed or VCF file is empty\nproc isAnEmptyFile {bedOrVCFfile} {\n\n# Return 1 if the extension is not .bed or .vcf\nif {![regexp -nocase \"\\\\.(bed|vcf(.gz)?)$\" $bedOrVCFfile]} {return 1}\n\n# After filtering lines beginning with \"#\", at least 1 line should be still present\nif {[regexp -nocase \".gz$\" $bedOrVCFfile]} {\n    set f [open \"|gzip -cd $bedOrVCFfile\"]\n} else {\n    set f [open \"$bedOrVCFfile\"]\n}\nset test 0\nwhile {![eof $f]} {\n    set L [gets $f]\n    if {$L eq \"\"} {continue}\n    if {[regexp \"^#\" $L]} {continue}\n    incr test\n    break\n}\n\nif {$test} {return 0} else {return 1}\n}\n\n\n# Check the -samplesidBEDcol option (= number of the \"samples_ID\" column)\n# - Should be > 3 (the 3 first columns are chrom, start, end)\n# - Should be an existing column (<= total number of columns)\nproc checksamplesidBEDcol {bedFile} {\n\nglobal g_AnnotSV\n\n\nif {$g_AnnotSV(samplesidBEDcol) ne -1} {\n    \n    # Look at the length of a line in the bed file\n    set f [open $bedFile]\n    while {![eof $f]} {\n        set L [gets $f]\n        if {$L eq \"\"} {continue}\n        if {[regexp \"^#\" $L]} {continue}\n        \n        set thelength [llength [split $L \"\\t\"]]\n        break\n    }\n    close $f\n    \n    # Check the -samplesidBEDcol option, and set it to -1 if the column doesn't exist\n    if {$g_AnnotSV(samplesidBEDcol) ne -1} {\n        if {$g_AnnotSV(samplesidBEDcol) > $thelength} {\n            puts \"\\nWARNING: -samplesidBEDcol = $g_AnnotSV(samplesidBEDcol)\"\n            puts \"This value should correspond to a column of $bedFile ($thelength columns)\"\n            puts \"-samplesidBEDcol is set to -1.\\n\"\n            set g_AnnotSV(samplesidBEDcol) \"-1\"\n        } elseif {$g_AnnotSV(samplesidBEDcol) < 4} {\n            puts \"\\nWARNING: -samplesidBEDcol = $g_AnnotSV(samplesidBEDcol)\"\n            puts \"This value should be > 3\"\n            puts \"-samplesidBEDcol is set to -1.\\n\"\n            set g_AnnotSV(samplesidBEDcol) \"-1\"\n        }\n    }\n    \n    # If g_AnnotSV(samplesidBEDcol) is still different to -1\n    # -> formatting of the different values in the \"Samples_ID\" column\n    if {$g_AnnotSV(samplesidBEDcol) ne -1} {\n        \n        incr g_AnnotSV(samplesidBEDcol) -1 ;# 0 is the first element of an informatic list: -1\n        set g_AnnotSV(samplesidTSVcol) [expr {$g_AnnotSV(samplesidBEDcol)+2}]\n        \n        # This column should be a coma separated list of samplesid\n        set L_toWrite {}\n        set L_fromStart {}\n        set f [open $bedFile]\n        while {![eof $f]} {\n            set L [gets $f]\n            if {$L eq \"\"} {continue}\n            \n            lappend L_fromStart $L\n            if {[regexp \"^#\" $L]} {lappend L_toWrite $L; continue}\n            \n            set Ls [split $L \"\\t\"]\n            \n            set part2 [lindex $Ls $g_AnnotSV(samplesidBEDcol)]\n            set part2 [join [split $part2 \" +| *\\\\\\| *| *, *| *; *| */ *\"] \",\"]\n            \n            lappend L_toWrite [join [lreplace $Ls $g_AnnotSV(samplesidBEDcol) $g_AnnotSV(samplesidBEDcol) $part2] \"\\t\"]\n        }\n        close $f\n        if {$L_toWrite ne $L_fromStart} {\n            ReplaceTextInFile [join $L_toWrite \"\\n\"] $bedFile\n        }\n    }\n}\n\nreturn\n}\n\n\n# Check the -svtBEDcol option (= number of the SVtype column)\n# - Should be > 3 (the 3 first columns are chrom, start, end)\n# - Should be an existing column (<= total number of columns)\nproc checksvtBEDcol {bedFile} {\n\nglobal g_AnnotSV\n\n\nif {$g_AnnotSV(svtBEDcol) ne -1} {\n    \n    # Look at the length of a line in the bed file\n    set f [open $bedFile]\n    while {![eof $f]} {\n        set L [gets $f]\n        if {$L eq \"\"} {continue}\n        if {[regexp \"^#\" $L]} {continue}\n        set thelength [llength [split $L \"\\t\"]]\n        break\n    }\n    close $f\n    \n    # Check the -svtBEDcol option, is set to -1 if the column doesn't exist\n    if {$g_AnnotSV(svtBEDcol) ne -1} {\n        if {$g_AnnotSV(svtBEDcol) > $thelength} {\n            puts \"\\nWARNING: -svtBEDcol = $g_AnnotSV(svtBEDcol)\"\n            puts \"This value should correspond to a column of $bedFile ($thelength columns)\"\n            puts \"-svtBEDcol is set to -1. NO SV RANKING WILL BE PERFORMED.\\n\"\n            set g_AnnotSV(svtBEDcol) \"-1\"\n            set g_AnnotSV(ranking) 0\n        } elseif {$g_AnnotSV(svtBEDcol) < 4} {\n            puts \"\\nWARNING: -svtBEDcol = $g_AnnotSV(svtBEDcol)\"\n            puts \"This value should be > 3\"\n            puts \"-svtBEDcol is set to -1. NO SV RANKING WILL BE PERFORMED.\\n\"\n            set g_AnnotSV(svtBEDcol) \"-1\"\n            set g_AnnotSV(ranking) 0\n        } else {\n            # 0 is the first element of an informatic list: -1\n            # AND 2 columns (AnnotSV ID + SV length) are added: +2\n            # Finally: +1\n            incr g_AnnotSV(svtBEDcol) -1 ;# number of the \"SV_type\" column in the input BED file\n            set g_AnnotSV(svtTSVcol) [expr {$g_AnnotSV(svtBEDcol) +2}] ;# number of the \"SV_type\" column in the output TSV file\n        }\n    }\n}\nreturn\n}\n\n"
  },
  {
    "path": "share/tcl/AnnotSV/AnnotSV-genes.tcl",
    "content": "############################################################################################################\n# AnnotSV 3.5.8                                                                                            #\n#                                                                                                          #\n# AnnotSV: An integrated tool for Structural Variations annotation and ranking                             #\n#                                                                                                          #\n# Copyright (C) 2017-present Veronique Geoffroy (veronique.geoffroy@inserm.fr)                             #\n#                                                                                                          #\n# This is part of AnnotSV source code.                                                                     #\n#                                                                                                          #\n# This program is free software; you can redistribute it and/or                                            #\n# modify it under the terms of the GNU General Public License                                              #\n# as published by the Free Software Foundation; either version 3                                           #\n# of the License, or (at your option) any later version.                                                   #\n#                                                                                                          #\n# This program is distributed in the hope that it will be useful,                                          #\n# but WITHOUT ANY WARRANTY; without even the implied warranty of                                           #\n# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the                                             #\n# GNU General Public License for more details.                                                             #\n#                                                                                                          #\n# You should have received a copy of the GNU General Public License                                        #\n# along with this program; If not, see <http://www.gnu.org/licenses/>.                                     #\n############################################################################################################\n\n\n## - Check and create if necessary the \"genes.RefSeq.sorted.bed\" file\nproc checkGenesRefSeqFile {} {\n    \n    global g_AnnotSV\n    \n    ## Check if the Genes file has been downloaded then formatted\n    #############################################################\n    set genesDir \"$g_AnnotSV(annotationsDir)/Annotations_$g_AnnotSV(organism)/Genes/$g_AnnotSV(genomeBuild)\"\n    \n    if {[regexp \"GRCh37|GRCh38|mm39\" $g_AnnotSV(genomeBuild)]} {\n        set genesFileDownloaded [glob -nocomplain $genesDir/ncbiRefSeq.txt.gz]\n    } elseif {[regexp \"mm9|mm10\" $g_AnnotSV(genomeBuild)]} {\n        set genesFileDownloaded [glob -nocomplain $genesDir/refGene.txt.gz]\n    } elseif {[regexp \"CHM13\" $g_AnnotSV(genomeBuild)]} {\n        set genesFileDownloaded [glob -nocomplain $genesDir/hs1_curGene*.txt.gz]\n    }\n    \n    set genesFileFormatted \"[glob -nocomplain $genesDir/genes.RefSeq.sorted.bed]\"\n    set transcriptVersionFile \"$genesDir/transcript_version.RefSeq.tsv\"\n    \n    if {$genesFileDownloaded eq \"\" && $genesFileFormatted eq \"\"} {\n        puts \"############################################################################\"\n        puts \"\\\"$genesDir/*.txt.gz\\\" file doesn't exist\"\n        puts \"Please check your install - Exit with error.\"\n        puts \"############################################################################\"\n        exit 2\n    }\n    \n    if {$genesFileFormatted eq \"\"} {\n        \n        ## Delete promoters files (need to be updated after the creation of new genes file)\n        ###################################################################################\n        set promoterDir \"$g_AnnotSV(annotationsDir)/Annotations_$g_AnnotSV(organism)/FtIncludedInSV/RegulatoryElements/$g_AnnotSV(genomeBuild)\"\n        foreach promFile [glob -nocomplain \"$promoterDir/promoter_*bp_RefSeq_$g_AnnotSV(genomeBuild).sorted.bed\"] {\n            file delete -force $promFile\n        }\n        \n        ## - Create the \"genes.RefSeq.sorted.bed\"\n        #########################################\n        set genesFileFormatted \"$genesDir/genes.RefSeq.sorted.bed\"\n        puts \"\\t...creation of $genesFileFormatted ([clock format [clock seconds] -format \"%B %d %Y - %H:%M\"])\"\n        puts \"\\t   (done only once during the first annotation)\"\n        \n        # Removing non-standard contigs (other than the standard 1-22,X,Y,MT) and sorting the file in karyotypic order\n        # -> create L_genesTXTsorted\n        \n        ## Save the line of the genesTXT by chromosome (L_lines($chrom))\n        foreach L [LinesFromGZFile $genesFileDownloaded] {\n            set Ls [split $L \"\\t\"]\n            set chrom [lindex $Ls 2]\n            lappend L_lines($chrom) \"$L\"\n        }\n        ## Sorting in karyotypic order\n        set L_genesTXTsorted {}\n        foreach val {1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 X Y M MT} {\n            if {![info exists L_lines(chr$val)]} {continue}\n            lappend L_genesTXTsorted {*}\"[lsort -command AscendingSortOnElement4 [lsort -command AscendingSortOnElement5 $L_lines(chr$val)]]\"\n        }\n        \n        # Creation of the \"$genesFileFormatted\"\n        #######################################\n        file delete -force $transcriptVersionFile\n        \n        # Chromosome nomenclature used: 1-22,X,Y,M,T (without \"chr\")\n        ## INPUT:    #bin name chrom strand txStart txEnd cdsStart cdsEnd exonCount exonStarts exonEnds score name2 cdsStartStat cdsEndStat exonFrames\n        #            (cf https://genome.ucsc.edu/cgi-bin/hgTables?db=hg38&hgta_group=genes&hgta_track=refSeqComposite&hgta_table=ncbiRefSeqCurated&hgta_doSchema=describe+table+schema)\n        ## OUTPUT:   chrom txStart txEnd strand name2 name cdsStart cdsEnd exonStarts exonEnds\n        # WARNING : NR_* are for non coding RNA. However, cdsStart=cdsEnd, => CDSlength=1\n        set L_TxVersionToWrite {}\n        set L_formattedGenesToWrite {}\n        foreach L $L_genesTXTsorted {\n            set Ls [split $L \"\\t\"]\n            regsub \"chr\" [lindex $Ls 2] \"\" chrom\n            if {![regexp \"(\\[^.\\]+)\\\\.(\\[0-9_\\]+)$\" [lindex $Ls 1] match transcript_ID transcript_version]} {\n                set transcript_ID [lindex $Ls 1]\n                set transcript_version \"\"\n            }\n            lappend L_TxVersionToWrite \"$transcript_ID\\t$transcript_version\"\n            set line \"$chrom\\t[lindex $Ls 4]\\t[lindex $Ls 5]\\t[lindex $Ls 3]\\t[lindex $Ls 12]\\t$transcript_ID\\t[lindex $Ls 6]\\t[lindex $Ls 7]\\t[lindex $Ls 9]\\t[lindex $Ls 10]\"\n            if {![info exists infos($line)]} {\n                lappend L_formattedGenesToWrite $line\n                set infos($line) 1\n            }\n        }\n        file delete -force $genesFileDownloaded\n        WriteTextInFile [join $L_formattedGenesToWrite \"\\n\"] $genesFileFormatted.tmp\n        WriteTextInFile [join $L_TxVersionToWrite \"\\n\"] $transcriptVersionFile\n        \n        # Sorting of the bedfile:\n        # Intersection with very large files can cause trouble with excessive memory usage.\n        # A presort of the bed files by chromosome and then by start position combined with the use of the -sorted option will invoke a memory-efficient algorithm.\n        set sortTmpFile \"$g_AnnotSV(outputDir)/[clock format [clock seconds] -format \"%Y%m%d-%H%M%S\"]_[pid]_sort.tmp.bash\"\n        ReplaceTextInFile \"#!/bin/bash\" $sortTmpFile\n        WriteTextInFile \"# The locale specified by the environment can affects the traditional sort order. We need to use native byte values.\" $sortTmpFile\n        WriteTextInFile \"export LC_ALL=C\" $sortTmpFile\n        WriteTextInFile \"sort -k1,1 -k2,2n $genesFileFormatted.tmp > $genesFileFormatted\" $sortTmpFile\n        file attributes $sortTmpFile -permissions 0755\n        if {[catch {eval exec bash $sortTmpFile} Message]} {\n            puts \"-- checkGenesRefSeqFile --\"\n            puts \"sort -k1,1 -k2,2n $genesFileFormatted.tmp > $genesFileFormatted\"\n            puts \"$Message\"\n            puts \"Exit with error\"\n            exit 2\n        }\n        file delete -force $sortTmpFile\n        file delete -force $genesFileFormatted.tmp\n        \n    }\n    \n    # DISPLAY:\n    ##########\n    set g_AnnotSV(genesFile) $genesFileFormatted\n    \n}\n\n\n\n## - Check the \"genes.ENSEMBL.sorted.bed\" file\nproc checkGenesENSEMBLfile {} {\n    \n    global g_AnnotSV\n    \n    ## Check if the formatted ENSEMBL genes file is present\n    #######################################################\n    set genesDir \"$g_AnnotSV(annotationsDir)/Annotations_$g_AnnotSV(organism)/Genes/$g_AnnotSV(genomeBuild)\"\n    \n    set TmpGenesENSEMBLfileFormatted \"$genesDir/genes.ENSEMBL.sorted.tmp.bed\"\n    # Header of \"genes.ENSEMBL.sorted.tmp.bed\" (after the awk command, cf in the README):\n    # 1       11868   14409   +       DDX11L2 ENST00000456328.2       14409   14409   11868,12612,13220,      12227,12721,14409,\n    set GenesENSEMBLfileFormatted \"$genesDir/genes.ENSEMBL.sorted.bed\"\n    # Header of \"refGene.sorted.bed\" (after this proc):\n    # 1       11868   14409   +       DDX11L2 ENST00000456328       14409   14409   11868,12612,13220,      12227,12721,14409,\n    \n    set transcriptVersionFile \"$genesDir/transcript_version.ENSEMBL.tsv\"\n    \n    \n    if {![file exists $GenesENSEMBLfileFormatted] && ![file exists $TmpGenesENSEMBLfileFormatted]} {\n        puts \"############################################################################\"\n        puts \"\\\"$GenesENSEMBLfileFormatted\\\" doesn't exist\"\n        puts \"Please check your install - Exit with error.\"\n        puts \"############################################################################\"\n        exit 2\n    }\n    \n    if {[file exists $TmpGenesENSEMBLfileFormatted] && ![file exists $GenesENSEMBLfileFormatted]} {\n        ## - Create the \"genes.ENSEMBL.sorted.bed\" and \"transcript_version.ENSEMBL.tsv\"\n        ###############################################################################\n        puts \"\\t...creation of $GenesENSEMBLfileFormatted ([clock format [clock seconds] -format \"%B %d %Y - %H:%M\"])\"\n        puts \"\\t   (done only once during the first annotation)\"\n        \n        # WARNING: \"transcript_version.ENSEMBL.tsv\" is empty for the GRCh37 build\n        \n        set L_TxVersionToWrite {}\n        set L_toWrite {}\n        foreach L [LinesFromFile $TmpGenesENSEMBLfileFormatted] {\n            set Ls [split $L \"\\t\"]\n            if {![regexp \"(\\[^.\\]+)\\\\.(\\[0-9_\\]+)$\" [lindex $Ls 5] match transcript_ID transcript_version]} {\n                set transcript_ID [lindex $Ls 5]\n                set transcript_version \"\"\n            }\n            lappend L_TxVersionToWrite \"$transcript_ID\\t$transcript_version\"\n            lappend L_toWrite \"[join [lrange $Ls 0 4] \"\\t\"]\\t$transcript_ID\\t[join [lrange $Ls 6 end] \"\\t\"]\"\n        }\n        WriteTextInFile [join $L_TxVersionToWrite \"\\n\"] $transcriptVersionFile\n        WriteTextInFile [join $L_toWrite \"\\n\"] $GenesENSEMBLfileFormatted\n        \n        file delete -force $TmpGenesENSEMBLfileFormatted\n    }\n    \n    # DISPLAY:\n    ##########\n    set g_AnnotSV(genesFile) $GenesENSEMBLfileFormatted\n}\n\n\n\n\nproc transcriptVersionAnnotation {transcript_ID} {\n    \n    global g_AnnotSV\n    global g_transcriptVersion\n    \n    if {$g_AnnotSV(organism) ne \"Human\"} {set g_transcriptVersion(Done) 1}\n    \n    if {![info exists g_transcriptVersion(Done)]} {\n        set g_transcriptVersion(Done) 1\n        set genesDir \"$g_AnnotSV(annotationsDir)/Annotations_$g_AnnotSV(organism)/Genes/$g_AnnotSV(genomeBuild)\"\n        set transcriptVersionFile \"$genesDir/transcript_version.$g_AnnotSV(tx).tsv\"\n        \n        if {![file exists $transcriptVersionFile]} {\n            puts \"############################################################################\"\n            puts \"\\\"$transcriptVersionFile\\\" doesn't exist\"\n            puts \"Please check your install - Exit with error.\"\n            puts \"############################################################################\"\n            exit 2\n        }\n        \n        foreach L [LinesFromFile $transcriptVersionFile] {\n            set Ls [split $L \"\\t\"]\n            set g_transcriptVersion([lindex $Ls 0]) [lindex $Ls 1]\n        }\n    }\n    \n    if {[info exists g_transcriptVersion($transcript_ID)]} {\n        return $g_transcriptVersion($transcript_ID)\n    } else {\n        return \"\"\n    }\n}\n\n\n\n## Annotate the SV bedFile with the genes file.\n## Keep only 1 transcript annotation by gene:\n##   - the one selected by the user with the \"-txFile\" option\n##   - the one with the most of \"bp from CDS\" (=overlappedCDSlength)\n##   - if x transcript with same \"bp from CDS\", the one with the most of \"bp from UTR, exon, intron\" (=overlappedTxLength)\n##\n## Creation of FullAndSplitBedFile ($g_AnnotSV(outputDir)/$g_AnnotSV(outputFile).tmp)\n## -> formatted and sorted\nproc genesAnnotation {} {\n    \n    global g_AnnotSV\n    global g_Lgenes\n    \n    \n    # Check the -svtBEDcol and -samplesidBEDcol options\n    # Create the -svtTSVcol variable\n    #####################################################################################\n    checksvtBEDcol $g_AnnotSV(bedFile)\n    checksamplesidBEDcol $g_AnnotSV(bedFile)\n    \n    # Bedfile should be sorted and should not have \"chr\" in the first column\n    ########################################################################\n    # Removing non-standard contigs (other than the standard 1-22,X,Y,MT) and sorting the file in karyotypic order\n    set f [open $g_AnnotSV(bedFile)]\n    set test 0\n    while {![eof $f]} {\n        set L [gets $f]\n        if {$L eq \"\"} {continue}\n        \n        # To avoid a bug with \"bedtools intersect\", the last value of a line could NOT be empty.\n        # Exemple of bedtools error message:\n        # \"Error: line number 716 of file input.formatted.sorted.bed has 6 fields, but 4 were expected.\"\n        regsub \"\\t$\" $L \"\\t.\" L\n        \n        # To avoid a bug, the SV type value should be trimmed (should not be equal to \"DEL \")\n        # For each tab separated value, any leading or trailing white space is removed\n        set Ls [split $L \"\\t\"]\n        set newLs \"\"\n        foreach val $Ls {\n            lappend newLs [string trim $val]\n        }\n        set L [join $newLs \"\\t\"]\n        \n        if {[regsub \"chr\" [lindex $L 0] \"\" chrom] ne 0} {\n            lappend L_Text($chrom) \"[string range $L 3 end]\"\n        } else {\n            lappend L_Text($chrom) \"$L\"\n        }\n    }\n    close $f\n    ## Writing the bedfile (not sorted)\n    set emptyBed 1\n    regsub -nocase \".bed$\" $g_AnnotSV(bedFile) \".formatted.sorted.bed\" newBed\n    set newBed \"$g_AnnotSV(outputDir)/[file tail $newBed]\"\n    file delete -force $newBed\n    foreach chrom {1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 X Y M MT} {\n        if {![info exists L_Text($chrom)]} {continue}\n        set emptyBed 0\n        WriteTextInFile [join $L_Text($chrom) \"\\n\"] $newBed.tmp\n        unset L_Text($chrom)\n    }\n    if {$emptyBed} {\n        puts \"The SV input file is empty or badly formatted.\"\n        puts \"Exit with error\\n\"\n        exit 2\n    }\n    \n    # Sorting of the bedfile:\n    # Intersection with very large files can cause trouble with excessive memory usage.\n    # A presort of the bed files by chromosome and then by start position combined with the use of the -sorted option will invoke a memory-efficient algorithm.\n    set sortTmpFile \"$g_AnnotSV(outputDir)/[clock format [clock seconds] -format \"%Y%m%d-%H%M%S\"]_[pid]_sort.tmp.bash\"\n    ReplaceTextInFile \"#!/bin/bash\" $sortTmpFile\n    WriteTextInFile \"# The locale specified by the environment can affects the traditional sort order. We need to use native byte values.\" $sortTmpFile\n    WriteTextInFile \"export LC_ALL=C\" $sortTmpFile\n    WriteTextInFile \"sort -k1,1 -k2,2n $newBed.tmp >> $newBed\" $sortTmpFile\n    file attributes $sortTmpFile -permissions 0755\n    if {[catch {eval exec bash $sortTmpFile} Message]} {\n        puts \"-- genesAnnotation --\"\n        puts \"sort -k1,1 -k2,2n $newBed.tmp >> $newBed\"\n        puts \"$Message\"\n        puts \"Exit with error\\n\"\n        exit 2\n    }\n    file delete -force $sortTmpFile\n    file delete -force $newBed.tmp\n    set g_AnnotSV(bedFile) $newBed\n    \n    # Used for the insertion of the \"full/split\" information\n    set L_Bed [LinesFromFile $newBed]\n    \n    # OUTPUT:\n    ###############\n    set FullAndSplitBedFile \"$g_AnnotSV(outputDir)/$g_AnnotSV(outputFile).tmp\" ;# DON'T REMOVE IT! Used in AnnotSV-write.tcl\n    set splitBedFile \"$FullAndSplitBedFile.tmp\"\n    file delete -force $FullAndSplitBedFile\n    file delete -force $splitBedFile\n    \n    \n    # Intersect of the input SV bedfile with the genes annotations\n    # + create the \"FullAndSplitBedFile\"\n    ###################################################################################################\n    \n    set L_linesToWrite {}\n    set i_toWrite 0\n    ## -> Creation of the split annotations\n    if {[catch {exec $g_AnnotSV(bedtools) intersect -sorted -a $g_AnnotSV(bedFile) -b $g_AnnotSV(genesFile) -wa -wb > $splitBedFile} Message]} {\n        if {[catch {exec $g_AnnotSV(bedtools) intersect -a $g_AnnotSV(bedFile) -b $g_AnnotSV(genesFile) -wa -wb > $splitBedFile} Message]} {\n            puts \"-- genesAnnotation --\"\n            puts \"$g_AnnotSV(bedtools) intersect -sorted -a $g_AnnotSV(bedFile) -b $g_AnnotSV(genesFile) -wa -wb > $splitBedFile\"\n            puts \"$Message\"\n            puts \"Exit with error\"\n            exit 2\n        }\n    }\n    if {[file size $splitBedFile] eq 0} {\n        puts \"...no intersection between SV and gene annotation\"\n        set n 0\n        while {$n < [llength $L_Bed]} {\n            lappend L_linesToWrite \"[lindex $L_Bed $n]\\tfull\"\n            incr i_toWrite\n            incr n\n        }\n        WriteTextInFile [join $L_linesToWrite \"\\n\"] \"$FullAndSplitBedFile\"\n        \n        ## Delete temporary file\n        file delete -force $splitBedFile\n        return\n    }\n    \n    # List of the user selected transcripts\n    #######################################\n    set L_selectedTx {}\n    if {$g_AnnotSV(txFile) ne \"\"} {\n        foreach L [LinesFromFile $g_AnnotSV(txFile)] {\n            foreach tx [split $L \" |\\t\"] {\n                # Remove the version number if present\n                regsub \"\\\\.\\[0-9\\]+\" $tx \"\" tx\n                lappend L_selectedTx $tx\n            }\n        }\n    }\n    \n    # Parse the \"splitBedFile\"\n    ##########################\n    set L_allGenesOverlapped {}\n    set L_genes {}\n    set L \"[FirstLineFromFile $splitBedFile]\"\n    set Ls [split $L \"\\t\"]\n    set splitSVleft [lindex $Ls 1]\n    set splitSVright [lindex $Ls 2]\n    \n    # oldsplitSV (a complete line from the bedfile)\n    # Compulsory: In case of same SV presents several times in the bed file (but with different user annotation), a complete line should be kept\n    if {$g_AnnotSV(svtBEDcol) ne \"-1\"} {\n        set SVtype \"\\t[lindex $Ls \"$g_AnnotSV(svtBEDcol)\"]\"\n    } else {\n        set SVtype \"\"\n    }\n    set shortOldSplitSV \"[join [lrange $Ls 0 2] \"\\t\"]\"; # chrom, start, end\n    set oldSplitSV \"[join [lrange $Ls 0 end-10] \"\\t\"]\"\n    \n    # SVfromBED (a complete line from the bedfile)\n    set n 0\n    set Ls_fromBED \"[split [lindex $L_Bed $n] \"\\t\"]\"\n    if {$g_AnnotSV(svtBEDcol) ne \"-1\"} {\n        set SVtypeFromBED \"\\t[lindex $Ls_fromBED \"$g_AnnotSV(svtBEDcol)\"]\"\n    } else {\n        set SVtypeFromBED \"\"\n    }\n    set SVfromBED \"[join $Ls_fromBED \"\\t\"]\"\n    \n    # Particular case: only 1 SV is associated with split lines AND it is not the first SV of the BED.\n    while {$SVfromBED ne $oldSplitSV} {\n        # Writing of the \"full\" SV line (not present in the $splitBedFile file, if not covering a gene)\n        lappend L_linesToWrite \"[lindex $L_Bed $n]\\tfull\"\n        incr i_toWrite\n        incr n\n        set Ls_fromBED \"[split [lindex $L_Bed $n] \"\\t\"]\"\n        if {$g_AnnotSV(svtBEDcol) ne \"-1\"} {\n            set SVtypeFromBED \"\\t[lindex $Ls_fromBED \"$g_AnnotSV(svtBEDcol)\"]\"\n        } else {\n            set SVtypeFromBED \"\"\n        }\n        set SVfromBED \"[join $Ls_fromBED \"\\t\"]\"\n    }\n    \n    # We have several annotations for 1 SV: 1 by gene.\n    #\n    # Keep only 1 transcript by gene:\n    #   - the one selected by the user with the \"-txFile\" option\n    #   - the one with the most of \"bp\" of overlapped CDS (=overlappedCDSlength)\n    #   - if x transcript with same \"bp of overlapped CDS\", the one with the most of \"bp\" of overlapped transcript (=overlapped \"UTR, exon, intron\" = overlappedTxLength)\n    set f [open $splitBedFile]\n    while {![eof $f]} {\n        set L [gets $f]\n        if {$L eq \"\"} {continue}\n        set Ls [split $L \"\\t\"]\n        \n        # splitSV (all the line from the bedfile)\n        if {$g_AnnotSV(svtBEDcol) ne \"-1\"} {\n            set SVtype \"\\t[lindex $Ls \"$g_AnnotSV(svtBEDcol)\"]\"\n        } else {\n            set SVtype \"\"\n        }\n        set splitSV \"[join [lrange $Ls 0 end-10] \"\\t\"]\"\n        \n        if {$splitSV ne $oldSplitSV} {;# new annotated SV line (all the split lines are done for the oldSV) => we write all information about the oldSV\n            while {$SVfromBED ne $splitSV} {\n                # Writing of the \"full\" SV line (not present in the $splitBedFile file, if not covering a gene)\n                lappend L_linesToWrite \"[lindex $L_Bed $n]\\tfull\"\n                incr i_toWrite\n                if {$i_toWrite > 10000} {\n                    WriteTextInFile [join $L_linesToWrite \"\\n\"] \"$FullAndSplitBedFile\"\n                    set L_linesToWrite {}\n                    set i_toWrite 0\n                }\n                # Writing of 1 \"split\" line...\n                if {$SVfromBED eq $oldSplitSV} {\n                    # We remove the redundancy and we keep the coordinate sorting\n                    set L_genes [RemoveRedundancyWithoutSorting $L_genes]\n                    \n                    set g_Lgenes($shortOldSplitSV) [join $L_genes \";\"]\n                    # ...for each gene overlapped by the SV\n                    foreach gene $L_genes {\n                        set bestCDSlov -1\n                        set bestCDSlcompl -1\n                        set bestTxL -1\n                        set bestAnn \"\"\n                        foreach CDSlov $L_overlappedCDSlength($gene) CDSlcompl $L_completeCDSlength($gene) txL $L_overlappedTxLength($gene) ann $L_annot($gene)  {\n                            if {$CDSlov > $bestCDSlov} {\n                                set bestAnn $ann; set bestCDSlov $CDSlov; set bestCDSlcompl $CDSlcompl; set bestTxL $txL; continue\n                            }\n                            if {$CDSlov eq $bestCDSlov} {\n                                if {$txL > $bestTxL} {\n                                    set bestAnn $ann; set bestCDSlov $CDSlov; set bestCDSlcompl $CDSlcompl; set bestTxL $txL; continue\n                                }\n                            }\n                        }\n                        if {$bestCDSlcompl eq 0} {\n                            set percentCDS 0\n                        } else {\n                            set percentCDS [expr {$bestCDSlov*100/$bestCDSlcompl}]\n                        }\n                        lappend L_linesToWrite \"$bestAnn\\t$bestCDSlov\\t$percentCDS\\t$bestTxL\\tsplit\"\n                        incr i_toWrite\n                    }\n                    set splitSVleft [lindex $Ls 1]\n                    set splitSVright [lindex $Ls 2]\n                    unset L_annot\n                    unset L_overlappedTxLength\n                    unset L_overlappedCDSlength\n                    unset L_completeCDSlength\n                    # check the catch\n                    catch {unset Finish}\n                    set L_genes {}\n                    set oldSplitSV \"$splitSV\"\n                    regexp \"^\\[^\\t\\]+\\t\\[^\\t\\]+\\t\\[^\\t\\]+\" $oldSplitSV shortOldSplitSV\n                }\n                incr n\n                set Ls_fromBED \"[split [lindex $L_Bed $n] \"\\t\"]\"\n                if {$g_AnnotSV(svtBEDcol) ne \"-1\"} {\n                    set SVtypeFromBED \"\\t[lindex $Ls_fromBED \"$g_AnnotSV(svtBEDcol)\"]\"\n                } else {\n                    set SVtypeFromBED \"\"\n                }\n                set SVfromBED \"[join $Ls_fromBED \"\\t\"]\"\n            }\n        }\n        set txName [lindex $Ls end-4]\n        set gene [lindex $Ls end-5]\n        lappend L_allGenesOverlapped $gene\n        \n        # Look if the annotation line of a user selected transcript has already been registered for this gene\n        # If yes, no need to recalculate the txStart, txEnd, CDSstart...\n        if {[info exists Finish($gene)]} {continue}\n        \n        # No preferred transcript annotation registered at this step, continue the selection with the CDS/Tx lengths\n        lappend L_genes $gene\n        lappend L_annot($gene) \"$L\"\n        \n        set txStart [lindex $Ls end-8]\n        set txEnd [lindex $Ls end-7]\n        set CDSstart [lindex $Ls end-3]\n        set CDSend [lindex $Ls end-2]\n        set exonStarts [lindex $Ls end-1]\n        set exonEnds [lindex $Ls end]\n        \n        # Calcul of overlappedTxLength:\n        if {$txStart > $splitSVleft} {set splitSV_start $txStart} else {set splitSV_start $splitSVleft}\n        if {$txEnd < $splitSVright} {set splitSV_end $txEnd} else {set splitSV_end $splitSVright}\n        set overlappedTxLength [expr {$splitSV_end-$splitSV_start}]\n        lappend L_overlappedTxLength($gene) \"$overlappedTxLength\"\n        \n        # Calcul of completeCDSlength:\n        set completeCDSlength 0\n        foreach A [split $exonStarts \",\"] B [split $exonEnds \",\"] {\n            if {$A eq \"\" || $B eq \"\"} {continue}\n            #set txEnd $B\n            # Remove exon(s) not in the CDS:\n            if {$A<$CDSstart} {\n                if {$B<$CDSstart} {continue}\n                incr completeCDSlength [expr {$B-$CDSstart}]\n                continue\n            }\n            if {$B>$CDSend} {\n                if {$A>$CDSend} {continue}\n                incr completeCDSlength [expr {$CDSend-$A}]\n                continue\n            }\n            incr completeCDSlength [expr {$B-$A}]\n        }\n        lappend L_completeCDSlength($gene) \"$completeCDSlength\"\n        \n        # Calcul of overlappedCDSlength:\n        set overlappedCDSlength 0\n        foreach A [split $exonStarts \",\"] B [split $exonEnds \",\"] {\n            if {$A eq \"\" || $B eq \"\"} {continue}\n            # Remove exon(s) not in the CDS:\n            if {$A<$CDSstart} {\n                if {$B<$CDSstart} {continue}\n                set A $CDSstart\n            }\n            if {$B>$CDSend} {\n                if {$A>$CDSend} {continue}\n                set B $CDSend\n            }\n            # Intersect coding exon(s) with the SV:\n            if {$splitSV_start<$A} {\n                if {$splitSV_end<$A} {break}\n                set i $A\n            } else {set i $splitSV_start}\n            if {$splitSV_start>$B} {continue}\n            if {$splitSV_end<$B} {set j $splitSV_end} else {set j $B}\n            incr overlappedCDSlength [expr {$j-$i}]\n        }\n        lappend L_overlappedCDSlength($gene) \"$overlappedCDSlength\"\n        \n        # Do we have a user selected transcript?\n        if {\"$txName\" ne \"\" && [lsearch -exact $L_selectedTx \"$txName\"] ne -1} {\n            set L_annot($gene) {}\n            lappend L_annot($gene) \"$L\"\n            set L_overlappedTxLength($gene) \"$overlappedTxLength\"\n            set L_overlappedCDSlength($gene) \"$overlappedCDSlength\"\n            set L_completeCDSlength($gene) \"$completeCDSlength\"\n            set Finish($gene) 1\n        }\n        \n    }\n    close $f\n    \n    # Treatment for the last SV of the file\n    ########################################\n    \n    # Writing of the \"full\" SV line (not present in the $splitBedFile file, if not covering a gene)\n    # Insertion of the \"full length\" SV line\n    lappend L_linesToWrite \"[lindex $L_Bed $n]\\tfull\"\n    incr i_toWrite\n    incr n\n    \n    # Treatment of the \"split by gene\" SV line\n    # We remove the redundancy and we keep the coordinate sorting\n    set L_genes_coordSorted_uniq {}\n    foreach gtmp $L_genes {\n        if {[lsearch -exact $L_genes_coordSorted_uniq \"$gtmp\"] eq -1} {\n            lappend L_genes_coordSorted_uniq $gtmp\n        }\n    }\n    set L_genes $L_genes_coordSorted_uniq\n    set g_Lgenes($shortOldSplitSV) [join $L_genes \";\"]\n    foreach gene $L_genes {\n        set bestCDSlov -1\n        set bestCDSlcompl -1\n        set bestTxL -1\n        set bestAnn \"\"\n        foreach CDSlov $L_overlappedCDSlength($gene) CDSlcompl $L_completeCDSlength($gene) txL $L_overlappedTxLength($gene) ann $L_annot($gene)  {\n            if {$CDSlov > $bestCDSlov} {\n                set bestAnn $ann; set bestCDSlov $CDSlov; set bestCDSlcompl $CDSlcompl; set bestTxL $txL; continue\n            }\n            if {$CDSlov eq $bestCDSlov} {\n                if {$txL > $bestTxL} {\n                    set bestAnn $ann; set bestCDSlov $CDSlov; set bestCDSlcompl $CDSlcompl; set bestTxL $txL; continue\n                }\n            }\n        }\n        if {$bestCDSlcompl eq 0} {\n            set percentCDS 0\n        } else {\n            set percentCDS [expr {$bestCDSlov*100/$bestCDSlcompl}]\n        }\n        lappend L_linesToWrite \"$bestAnn\\t$bestCDSlov\\t$percentCDS\\t$bestTxL\\tsplit\"\n        incr i_toWrite\n    }\n    \n    # Insertion of the last \"full length\" SV lines\n    while {$n < [llength $L_Bed]} {\n        lappend L_linesToWrite \"[lindex $L_Bed $n]\\tfull\"\n        incr i_toWrite\n        incr n\n    }\n    \n    ## Writing\n    WriteTextInFile [join $L_linesToWrite \"\\n\"] \"$FullAndSplitBedFile\"\n    \n    ## Delete temporary file\n    file delete -force $splitBedFile\n    \n    \n    ## Annotate the SV bedFile with the regulatory elements files\n    ## (Preparation of the phenotype-driven analysis (Exomiser) will be done there)\n    set L_allGenesOverlapped [lsort -unique $L_allGenesOverlapped]\n    regulatoryElementsAnnotation $L_allGenesOverlapped\n    \n    ## Memo:\n    #\n    #  The same SV can be annotated on several genes. Warning: annotations are not necessarily group by gene. Example:\n    ##################################################################################################################\n    #     1       144676654       144680028       DEL     SGT161364       NBPF8   NR_102405       0       3375    intron5-intron5 144676654       144680028\n    #     1       144676654       144680028       DEL     SGT161364       NBPF9   NM_001277444    0       3375    intron8-intron8 144676654       144680028\n    #     1       144676654       144680028       DEL     SGT161364       NBPF8   NR_102404       0       3375    intron6-intron6 144676654       144680028\n    #\n    # It's due to the alternance of NBPF8 and NBPF9 in the genes file:\n    ##################################################################\n    #     1       144614958       144830407       NBPF8   NR_102405       144830407       144830407       144614958,144618081,144619346,144619882,144621446,144813741,144814679,144815935,144816472,144817965,144823127,144823812,144824704,144825352,144826234,144826932,144827819,144828540,    144615303,144618296,144619419,144620094,144621656,144813844,144814894,144816008,144816678,144818017,144823179,144823985,144824756,144825525,144826286,144827105,144827928,144830407,\n    #     1       144614958       145370304       NBPF9   NM_001277444    144615130       145368684       144614958,144615095,144615246,144617149,144618081,144619346,144619882,144621446,144813741,144814679,144815935,144816472,144817965,144821920,144823127,144823812,144824704,144825352,144826234,144826932,144827819,145313333,145314215,145314903,145315790,145368440,    144614998,144615246,144615303,144617252,144618296,144619419,144620094,144621656,144813844,144814894,144816008,144816678,144818017,144822084,144823179,144823985,144824756,144825525,144826286,144827105,144827928,145313506,145314267,145315076,145315899,145370304,\n    #     1       144614958       144830407       NBPF8   NR_102404       144830407       144830407       144614958,144617149,144618081,144619346,144619882,144621446,144813741,144814679,144815935,144816472,144817965,144823127,144823812,144824704,144825352,144826234,144826932,144827819,144828540,  144615303,144617252,144618296,144619419,144620094,144621656,144813844,144814894,144816008,144816678,144818017,144823179,144823985,144824756,144825525,144826286,144827105,144827928,144830407,\n    \n    return\n}\n\n"
  },
  {
    "path": "share/tcl/AnnotSV/AnnotSV-haploinsufficiency.tcl",
    "content": "############################################################################################################\n# AnnotSV 3.5.8                                                                                            #\n#                                                                                                          #\n# AnnotSV: An integrated tool for Structural Variations annotation and ranking                             #\n#                                                                                                          #\n# Copyright (C) 2017-present Veronique Geoffroy (veronique.geoffroy@inserm.fr)                             #\n#                                                                                                          #\n# This is part of AnnotSV source code.                                                                     #\n#                                                                                                          #\n# This program is free software; you can redistribute it and/or                                            #\n# modify it under the terms of the GNU General Public License                                              #\n# as published by the Free Software Foundation; either version 3                                           #\n# of the License, or (at your option) any later version.                                                   #\n#                                                                                                          #\n# This program is distributed in the hope that it will be useful,                                          #\n# but WITHOUT ANY WARRANTY; without even the implied warranty of                                           #\n# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the                                            #\n# GNU General Public License for more details.                                                             #\n#                                                                                                          #\n# You should have received a copy of the GNU General Public License                                        #\n# along with this program; If not, see <http://www.gnu.org/licenses/>.                                     #\n############################################################################################################\n\n\n\n## - Check if the following HI file has been downloaded:\n#    - HI_Predictions_Version3.bed.gz\n#\n## - Check and create if necessary the following file:\n#    - 'date'_HI.tsv.gz\nproc checkHIfile {} {\n    \n    global g_AnnotSV\n    \n    ## Check if the HI file has been downloaded then formatted\n    #########################################################\n    set extannDir \"$g_AnnotSV(annotationsDir)/Annotations_$g_AnnotSV(organism)/Gene-based\"\n    \n    set HIfileDownloaded [glob -nocomplain \"$extannDir/DDD/HI_Predictions_Version3.bed.gz\"]\n    set HIfileFormattedGzip [glob -nocomplain \"$extannDir/DDD/*_HI.tsv.gz\"]\n    \n    if {$HIfileDownloaded eq \"\" && $HIfileFormattedGzip eq \"\"} {\n        # No \"Haploinsufficiency\" annotation\n        return\n    }\n    \n    if {[llength $HIfileFormattedGzip]>1} {\n        puts \"Several Haploinsufficiency files exist:\"\n        puts \"$HIfileFormattedGzip\"\n        puts \"Keep only one: [lindex $HIfileFormattedGzip end]\\n\"\n        foreach hi [lrange $HIfileFormattedGzip 0 end-1] {\n            file rename -force $hi $hi.notused\n        }\n        return\n    }\n    \n    if {$HIfileFormattedGzip eq \"\"} {\n        ## Create : 'date'_HI.tsv\n        \n        set HIfileFormatted \"$extannDir/DDD/[clock format [clock seconds] -format \"%Y%m%d\"]_HI.tsv\"\n        \n        puts \"\\t...HI configuration ([clock format [clock seconds] -format \"%B %d %Y - %H:%M\"])\"\n        \n        puts \"\\t\\t...creation of $HIfileFormatted.gz\"\n        puts \"\\t\\t   (done only once during the first HI annotation)\"\n        \n        set TexteToWrite {genes\\tDDD_HI_percent}\n        foreach L [LinesFromGZFile $HIfileDownloaded] {\n            if {[regexp  \"^track name\" $L]} {continue}\n            set Ls [split $L \"\\t\"]\n            \n            # Line example:\n            # chrX    37850070        37850569        HYPM|0.000043663|100%   0.000043663     .       37850070        37850569        0,255,0\n            set infos [split [lindex $Ls 3] \"|\"]\n            set gene [lindex $infos 0]\n            regsub \"%\" [lindex $infos end] \"\" percent\n            lappend TexteToWrite \"$gene\\t$percent\"\n        }\n        \n        # Write outputfile\n        WriteTextInFile [join $TexteToWrite \"\\n\"] $HIfileFormatted\n        if {[catch {exec gzip $HIfileFormatted} Message]} {\n            puts \"-- checkHIfile --\"\n            puts \"gzip $HIfileFormatted\"\n            puts \"$Message\\n\"\n        }\n        \n        file delete -force $HIfileDownloaded\n    }\n}\n\n"
  },
  {
    "path": "share/tcl/AnnotSV/AnnotSV-help.tcl",
    "content": "############################################################################################################\n# AnnotSV 3.5.8                                                                                            #\n#                                                                                                          #\n# AnnotSV: An integrated tool for Structural Variations annotation and ranking                             #\n#                                                                                                          #\n# Copyright (C) 2017-present Veronique Geoffroy (veronique.geoffroy@inserm.fr)                             #\n#                                                                                                          #\n# This is part of AnnotSV source code.                                                                     #\n#                                                                                                          #\n# This program is free software; you can redistribute it and/or                                            #\n# modify it under the terms of the GNU General Public License                                              #\n# as published by the Free Software Foundation; either version 3                                           #\n# of the License, or (at your option) any later version.                                                   #\n#                                                                                                          #\n# This program is distributed in the hope that it will be useful,                                          #\n# but WITHOUT ANY WARRANTY; without even the implied warranty of                                           #\n# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the                                            #\n# GNU General Public License for more details.                                                             #\n#                                                                                                          #\n# You should have received a copy of the GNU General Public License                                        #\n# along with this program; If not, see <http://www.gnu.org/licenses/>.                                     #\n############################################################################################################\n\nproc showHelp {} {\n    \n    global g_AnnotSV\n    \n    if {[file exists $g_AnnotSV(installDir)/commandLineOptions.txt]} {\n        puts [ContentFromFile $g_AnnotSV(installDir)/commandLineOptions.txt]\n    } elseif {[file exists $g_AnnotSV(docDir)/commandLineOptions.txt]} {\n        puts [ContentFromFile $g_AnnotSV(docDir)/commandLineOptions.txt]\n    }\n    \n    return\n}\n\n"
  },
  {
    "path": "share/tcl/AnnotSV/AnnotSV-loeuf-pLI.tcl",
    "content": "############################################################################################################\n# AnnotSV 3.5.8                                                                                            #\n#                                                                                                          #\n# AnnotSV: An integrated tool for Structural Variations annotation and ranking                             #\n#                                                                                                          #\n# Copyright (C) 2017-present Veronique Geoffroy (veronique.geoffroy@inserm.fr)                             #\n#                                                                                                          #\n# This is part of AnnotSV source code.                                                                     #\n#                                                                                                          #\n# This program is free software; you can redistribute it and/or                                            #\n# modify it under the terms of the GNU General Public License                                              #\n# as published by the Free Software Foundation; either version 3                                           #\n# of the License, or (at your option) any later version.                                                   #\n#                                                                                                          #\n# This program is distributed in the hope that it will be useful,                                          #\n# but WITHOUT ANY WARRANTY; without even the implied warranty of                                           #\n# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the                                            #\n# GNU General Public License for more details.                                                             #\n#                                                                                                          #\n# You should have received a copy of the GNU General Public License                                        #\n# along with this program; If not, see <http://www.gnu.org/licenses/>.                                     #\n############################################################################################################\n\n\n# - Check if the gnomAD (LOEUF) file has been downloaded:\n#   \"gnomad.v2.1.1.lof_metrics.by_gene.txt\"\n#\n# - Check and create if necessary the following file:\n#   'date'_gnomAD.LOEUF.pLI.annotations.tsv\nproc checkLOEUFfile {} {\n    \n    global g_AnnotSV\n    \n    ## Check if the LOEUF file has been downloaded then formatted\n    #############################################################\n    set extannDir \"$g_AnnotSV(annotationsDir)/Annotations_$g_AnnotSV(organism)/Gene-based\"\n    \n    set LOEUFfileDownloaded [glob -nocomplain \"$extannDir/gnomAD/gnomad.*.lof_metrics.by_gene.txt\"]\n    set LOEUFformattedFile  [glob -nocomplain \"$extannDir/gnomAD/*_gnomAD.LOEUF.pLI.annotations.tsv.gz\"]\n    \n    if {$LOEUFfileDownloaded eq \"\" && $LOEUFformattedFile eq \"\"} {\n        # No \"LOEUF\" annotation\n        return\n    }\n    \n    if {[llength $LOEUFformattedFile]>1} {\n        puts \"Several LOEUF files exist:\"\n        puts \"$LOEUFformattedFile\"\n        puts \"Keep only one: [lindex $LOEUFformattedFile end]\\n\"\n        foreach lf [lrange $LOEUFformattedFile 0 end-1] {\n            file rename -force $lf $lf.notused\n        }\n        return\n    }\n    \n    if {$LOEUFformattedFile eq \"\"} {\n        ## Create : 'date'_gnomAD.LOEUF.pLI.annotations.tsv.gz   ; # Header: genes  LOEUF_bin\n        set LOEUFformattedFile \"$extannDir/gnomAD/[clock format [clock seconds] -format \"%Y%m%d\"]_gnomAD.LOEUF.pLI.annotations.tsv\"\n        \n        puts \"\\t...creation of $LOEUFformattedFile.gz ([clock format [clock seconds] -format \"%B %d %Y - %H:%M\"])\"\n        puts \"\\t   (done only once during the first LOEUF annotation)\"\n        \n        ReplaceTextInFile \"genes\\tLOEUF_bin\\tpLI_gnomAD\\tpLI_ExAC\" $LOEUFformattedFile\n        foreach L [LinesFromFile $LOEUFfileDownloaded] {\n            set Ls [split $L \"\\t\"]\n            if {[regexp  \"^gene\" $L]} {\n                set i_gene    0\n                set i_loeuf   [lsearch -regexp $Ls \"^oe_lof_upper_bin\"]; if {$i_loeuf == -1} {puts \"Bad syntax into $LOEUFfileDownloaded.\\noe_lof_upper_bin field not found - Exit with error\"; exit 2}\n                set i_pLI     [lsearch -regexp $Ls \"^pLI\"];              if {$i_pLI == -1}   {puts \"Bad syntax into $LOEUFfileDownloaded.\\npLI field not found - Exit with error\"; exit 2}\n                set i_pLIexac [lsearch -regexp $Ls \"^exac_pLI\"];         if {$i_pLIexac == -1} {puts \"Bad syntax into $LOEUFfileDownloaded.\\nexac_pLI field not found - Exit with error\"; exit 2}\n                continue\n            }\n            set gene    [lindex $Ls $i_gene]\n            set loeuf   [lindex $Ls $i_loeuf]\n            set pLI     [lindex $Ls $i_pLI]\n            set pLIexac [lindex $Ls $i_pLIexac]\n            if {$loeuf != \"NA\"}   {lappend L_loeuf($gene) \"$loeuf\"}     ;# Low LOEUF scores (e.g. 0 from values [0-9]) suggest a higher intolerance to inactivation\n            if {$pLI != \"NA\"}     {lappend L_pLI($gene) \"$pLI\"}         ;# High pLI scores (e.g. 1 from values [0-1]) suggest a higher intolerance to inactivation\n            if {$pLIexac != \"NA\"} {lappend L_pLIexac($gene) \"$pLIexac\"} ;# High pLIexac scores (e.g. 0) suggest a higher intolerance to inactivation\n        }\n        \n        set TexteToWrite \"\"\n        set allGenes [array names L_loeuf]\n        lappend allGenes {*}[array names L_pLI]\n        lappend allGenes {*}[array names L_pLIexac]\n        set allGenes [lsort -unique $allGenes]\n        foreach g $allGenes {\n            if {![info exists L_loeuf($g)]} {set loeuf \"\"} else {set loeuf [lindex [lsort $L_loeuf($g)] 0]}\n            if {![info exists L_pLI($g)]} {set pLI \"\"} else {set pLI [lindex [lsort $L_pLI($g)] 0]}\n            if {![info exists L_pLIexac($g)]} {set pLIexac \"\"} else {set pLIexac [lindex [lsort $L_pLIexac($g)] 0]}\n            \n            lappend TexteToWrite \"$g\\t$loeuf\\t$pLI\\t$pLIexac\"\n        }\n        WriteTextInFile [join $TexteToWrite \"\\n\"] $LOEUFformattedFile\n        if {[catch {exec gzip $LOEUFformattedFile} Message]} {\n            puts \"-- checkLOEUFfile --\"\n            puts \"gzip $LOEUFformattedFile\"\n            puts \"$Message\\n\"\n        }\n        \n        file delete -force $LOEUFfileDownloaded\n    }\n}\n\n"
  },
  {
    "path": "share/tcl/AnnotSV/AnnotSV-ncbi.tcl",
    "content": "############################################################################################################\n# AnnotSV 3.5.8                                                                                            #\n#                                                                                                          #\n# AnnotSV: An integrated tool for Structural Variations annotation and ranking                             #\n#                                                                                                          #\n# Copyright (C) 2017-present Veronique Geoffroy (veronique.geoffroy@inserm.fr)                             #\n#                                                                                                          #\n# This is part of AnnotSV source code.                                                                     #\n#                                                                                                          #\n# This program is free software; you can redistribute it and/or                                            #\n# modify it under the terms of the GNU General Public License                                              #\n# as published by the Free Software Foundation; either version 3                                           #\n# of the License, or (at your option) any later version.                                                   #\n#                                                                                                          #\n# This program is distributed in the hope that it will be useful,                                          #\n# but WITHOUT ANY WARRANTY; without even the implied warranty of                                           #\n# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the                                            #\n# GNU General Public License for more details.                                                             #\n#                                                                                                          #\n# You should have received a copy of the GNU General Public License                                        #\n# along with this program; If not, see <http://www.gnu.org/licenses/>.                                     #\n############################################################################################################\n\nproc checkNCBIandHGNC {} {\n    \n    global g_AnnotSV\n    \n    # Check the existence of the \"$NCBIandHGNCgeneDir/results.txt\" file (for Human annotations)\n    # HGNC ID   Approved symbol                   Previous symbols        Alias symbols   NCBI Gene ID\n    # HGNC:5               A1BG                                                                      1\n    # HGNC:37133       A1BG-AS1        NCRNA00181, A1BGAS, A1BG-AS             FLJ23569         503538\n    # HGNC:24086           A1CF  ACF, ASP, ACF64, ACF65, APOBEC1CF                               29974\n    # HGNC:6              A1S9T\n    \n    set NCBIandHGNCgeneDir \"$g_AnnotSV(annotationsDir)/Annotations_$g_AnnotSV(organism)/Gene-based/NCBIandHGNCgeneID\"\n    if {![regexp \"Human\" $g_AnnotSV(organism)]} {\n        ## Checked the organism: should be \"Human\"\n        set g_AnnotSV(hpo) \"\" ;# used for exomiser\n    } elseif {![file exists \"$NCBIandHGNCgeneDir/results.txt\"]} {\n        ## Checked if the \"results.txt\" file exists\n        puts \"\\nWARNING: No Exomiser annotations available.\"\n        puts \"...$NCBIandHGNCgeneDir/results.txt doesn't exist\"\n        set g_AnnotSV(hpo) \"\" ;# used for exomiser\n    } elseif {![file exists \"$NCBIandHGNCgeneDir/geneSymbol_NCBIandHGNCgeneID.tsv\"]} {\n        # Checked if the \"geneSymbol_NCBIandHGNCgeneID.tsv\" file exists\n        set L_TextToWrite {\"genes\\tNCBI_gene_ID\\tHGNC_gene_ID\"}\n        foreach L [LinesFromFile \"$NCBIandHGNCgeneDir/results.txt\"] {\n            set Ls [split $L \"\\t\"]\n            \n            set NCBIgeneID [lindex $Ls 4]\n            if {$NCBIgeneID eq \"\" || [regexp -nocase \"NCBI Gene ID\" $NCBIgeneID]} {continue}\n            \n            set HGNCgeneID [lindex $Ls 0]\n            \n            set ApprovedSymbol [lindex $Ls 1]\n            if {$ApprovedSymbol ne \"\" && ![info exist tmp($ApprovedSymbol)]} {set tmp($ApprovedSymbol) 1; lappend L_TextToWrite \"$ApprovedSymbol\\t$NCBIgeneID\\t$HGNCgeneID\"}\n            \n            regsub -all \" \" [lindex $Ls 2] \"\" PreviousSymbol\n            foreach ps [split $PreviousSymbol \",\"] {\n                if {$ps ne \"\" && ![info exist tmp($ps)]} {set tmp($ps) 1; lappend L_TextToWrite \"$ps\\t$NCBIgeneID\\t$HGNCgeneID\"}\n            }\n            \n            regsub -all \" \" [lindex $Ls 3] \"\" AliasSymbol\n            foreach as [split $PreviousSymbol \",\"] {\n                if {$as ne \"\" && ![info exist tmp($as)]} {set tmp($as) 1; lappend L_TextToWrite \"$as\\t$NCBIgeneID\\t$HGNCgeneID\"}\n            }\n        }\n        WriteTextInFile [join $L_TextToWrite \"\\n\"] \"$NCBIandHGNCgeneDir/geneSymbol_NCBIandHGNCgeneID.tsv\"\n    }\n    \n    return\n}\n\n\nproc searchforNCBIGeneID {geneName} {\n    \n    global g_AnnotSV\n    global geneID\n    \n    if {![array exists geneID]} {\n        \n        set NCBIandHGNCgeneDir \"$g_AnnotSV(annotationsDir)/Annotations_$g_AnnotSV(organism)/Gene-based/NCBIandHGNCgeneID\"\n        # Header:\n        # HGNC ID   Approved symbol                   Previous symbols        Alias symbols   NCBI Gene ID\n        # HGNC:5               A1BG                                                                      1\n        # HGNC:37133       A1BG-AS1        NCRNA00181, A1BGAS, A1BG-AS             FLJ23569         503538\n        # HGNC:24086           A1CF  ACF, ASP, ACF64, ACF65, APOBEC1CF                               29974\n        # HGNC:6              A1S9T\n        foreach L [LinesFromFile \"$NCBIandHGNCgeneDir/results.txt\"] {\n            set Ls [split $L \"\\t\"]\n            if {[regexp \"Approved symbol\" $L]} {\n                set i_approuved [lsearch -exact $Ls \"Approved symbol\"]\n                set i_ncbi [lsearch -exact $Ls \"NCBI Gene ID\"]\n                set i_previous [lsearch -exact $Ls \"Previous symbol\"]\n                set i_alias [lsearch -exact $Ls \"Alias symbol\"]\n                continue\n            }\n            set Approved_symbol [lindex $Ls $i_approuved]\n            set NCBI_gene_ID [lindex $Ls $i_ncbi]\n            if {[regexp \"\\\\\\[\" $NCBI_gene_ID]} { ;# some lines have bad \"NCBI_gene_ID\" : \"CYP4F30P   4F-se9[6:7:8]   C2orf14   100132708\"\n                continue\n            }\n            set Previous_symbol [lindex $Ls $i_previous]\n            set Alias_symbol [lindex $Ls $i_alias]\n            \n            set geneID($Approved_symbol) $NCBI_gene_ID\n            set geneID($Previous_symbol) $NCBI_gene_ID\n            set geneID($Alias_symbol) $NCBI_gene_ID\n        }\n    }\n    \n    if {![info exists geneID($geneName)]} {\n        set geneID($geneName) \"\"\n    }\n    \n    return $geneID($geneName)\n}\n\n"
  },
  {
    "path": "share/tcl/AnnotSV/AnnotSV-omim.tcl",
    "content": "############################################################################################################\n# AnnotSV 3.5.8                                                                                            #\n#                                                                                                          #\n# AnnotSV: An integrated tool for Structural Variations annotation and ranking                             #\n#                                                                                                          #\n# Copyright (C) 2017-present Veronique Geoffroy (veronique.geoffroy@inserm.fr)                             #\n#                                                                                                          #\n# This is part of AnnotSV source code.                                                                     #\n#                                                                                                          #\n# This program is free software; you can redistribute it and/or                                            #\n# modify it under the terms of the GNU General Public License                                              #\n# as published by the Free Software Foundation; either version 3                                           #\n# of the License, or (at your option) any later version.                                                   #\n#                                                                                                          #\n# This program is distributed in the hope that it will be useful,                                          #\n# but WITHOUT ANY WARRANTY; without even the implied warranty of                                           #\n# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the                                            #\n# GNU General Public License for more details.                                                             #\n#                                                                                                          #\n# You should have received a copy of the GNU General Public License                                        #\n# along with this program; If not, see <http://www.gnu.org/licenses/>.                                     #\n############################################################################################################\n\n\n# No link is done without a check of the genomic location\n#########################################################\n# - AGS3 example:\n#\t\tgrep AGS3 $ANNOTSV/share/AnnotSV/Annotations_Human/Gene-based/OMIM/20240806_morbid.tsv\n#\t\t\tAGS3    yes\n#\t\t\t=> AGS3 is morbid\n#\t\tgrep AGS3 $ANNOTSV/share/AnnotSV/Annotations_Human/Genes/GRCh38/genes.RefSeq.sorted.bed\n#\t\t\t=> No genomic coordinates\n#\t\tgrep AGS3 $ANNOTSV/share/AnnotSV/Annotations_Human/Gene-based/NCBIandHGNCgeneID/geneSymbol_NCBIandHGNCgeneID.tsv\n#\t\t\tAGS3    26086\n#\t\t\t=> NCBIgeneID(AGS3) = 26086\n#\t\tgrep 26086 $ANNOTSV/share/AnnotSV/Annotations_Human/Gene-based/NCBIandHGNCgeneID/geneSymbol_NCBIandHGNCgeneID.tsv\n#\t\t\tGPSM1   26086\n#\t\t\tAGS3    26086\n#\t\t\tDKFZP727I051    26086\n#\t\t\t=> Without AGS3 coordinates, we can't link this gene to other genes (GPSM1, DKFZP727I051)\nproc memorizeGeneNameAlias {} {\n    \n    global g_AnnotSV\n    global g_alias\n    global g_L_coord\n    \n    if {$g_AnnotSV(organism) ne \"Human\"} { return }\n    \n    # Here, we memorize the RefSeq/ENSEMBL CHM13 gene coordinates (more complete than the GRCh37 and GRCh38)\n    # => Will permit to check the different alias of a unique gene (only for overlapping genomic coordinates. cf issues 156 + 132)\n    set geneCoordFile \"$g_AnnotSV(annotationsDir)/Annotations_$g_AnnotSV(organism)/Genes/CHM13/genes.$g_AnnotSV(tx).sorted.bed\"\n    foreach L [LinesFromFile $geneCoordFile] {\n        set chrom [lindex $L 0]\n        set start [lindex $L 1]\n        set end [lindex $L 2]\n        set gene [lindex $L 4]\n        # We keep all the coordinates for each gene (different transcripts; genes present on the chrX and chrY (e.g. WASH6P); genes present at different locations (e.g. SNORD81))\n        #\n        # Example: WASH6P\n        # grep WASH6P $ANNOTSV/share/AnnotSV/Annotations_Human/Genes/GRCh38/genes.ENSEMBL.sorted.bed\n        # X    156020825    156022415   +   WASH6P  ENST00000476066 156022415       156022415       156020825,156021505,156021693,156021998,156022322,      156021148,156021563,156021792,156022145,156022415,\n        # Y    57209886     57212186    +   WASH6P  ENST00000711283 57212186        57212186        57209886,57210639,      57209980,57212186,\n        #\n        # Example SNORD81:\n        # grep SNORD81 $ANNOTSV/share/AnnotSV/Annotations_Human/Genes/GRCh38/genes.ENSEMBL.sorted.bed\n        # 1       85592279        85592356        +       SNORD81 ENST00000363064 85592356        85592356        85592279,       85592356,\n        # 5       18236122        18236196        +       SNORD81 ENST00000390976 18236196        18236196        18236122,       18236196,\n        # 7       137287686       137287762       +       SNORD81 ENST00000365153 137287762       137287762       137287686,      137287762,\n        lappend g_L_coord($gene) \"$chrom $start $end\"\n    }\n    foreach gene [array names g_L_coord] {\n        set g_L_coord($gene) [lsort -unique $g_L_coord($gene)]\n    }\n    \n    # Then, for gene names not present in the $geneCoordFile (previous symbol, alias), we use the NCBIgeneID to retrieve new alias\n    # Memorize the link NCBIgeneID-GeneName\n    set NCBIandHGNCgeneDir \"$g_AnnotSV(annotationsDir)/Annotations_$g_AnnotSV(organism)/Gene-based/NCBIandHGNCgeneID\"\n    foreach L [LinesFromFile \"$NCBIandHGNCgeneDir/geneSymbol_NCBIandHGNCgeneID.tsv\"] {\n        set gene [lindex $L 0]\n        set NCBIgeneID [lindex $L 1]\n        set NCBIgeneIDfor($gene) $NCBIgeneID\n        lappend L_genesFor($NCBIgeneID) $gene\n    }\n    \n    # We memorize in \"$g_alias\" the association of the gene names overlapping the same genomic coordinates\n    # Example line (genemap2.txt, GRCh38):\n    # chr2    47806920        47906498        2p21    2p16.3  607871  FBXO11, FBX11, VIT1, PRMT9, IDDFBA      F-box only protein 11   FBXO11  80204   ENSG00000138081 ?2p16   Intellectual developmental disorder with dysmorphic facies and behavioral abnormalities, 618089 (3), Autosomal dominant        Fbxo11 (MGI:2147134)\n    # => PRMT9 (previous symbol) is located on chromosome 4\n    # => FBXO11 is not associated to PRMT9.\n    foreach geneToMatch [array names g_L_coord] {\n        \n        if {![info exists NCBIgeneIDfor($geneToMatch)]} {continue}\n        \n        foreach coordTrue $g_L_coord($geneToMatch) {\n            set trueChrom [lindex $coordTrue 0]\n            set trueStart [lindex $coordTrue 1]\n            set trueEnd [lindex $coordTrue 2]\n            foreach aliasGene $L_genesFor($NCBIgeneIDfor($geneToMatch)) {\n                if {[info exists g_L_coord($aliasGene)]} {\n                    foreach coord $g_L_coord($aliasGene) {\n                        set chrom [lindex $coord 0]\n                        set start [lindex $coord 1]\n                        set end [lindex $coord 2]\n                        if {$trueChrom ne $chrom} {continue}\n                        if {($start < $trueStart && $end > $trueStart) || ($start > $trueStart && $start < $trueEnd)} {\n                            lappend g_alias($geneToMatch) $aliasGene\n                            break\n                        }\n                    }\n                }\n            }\n        }\n    }\n    foreach g [array names g_alias] {\n        set g_alias($g) [lsort -unique $g_alias($g)]\n    }\n}\n\n\n\n## - Check if the \"genemap2.txt\" file exists.\n## - Check and create if necessary the 'date'_OMIM*annotations.tsv files.\nproc checkOMIMfile {} {\n    \n    global g_AnnotSV\n    global g_alias\n    global g_L_coord\n    \n    \n    ## Check if the OMIM file has been downloaded and create the formatted files if needed\n    ######################################################################################\n    set omimDir \"$g_AnnotSV(annotationsDir)/Annotations_$g_AnnotSV(organism)/Gene-based/OMIM\"\n    \n    # INFO:\n    # Genomic coordinates associated to the OMIM phenotype are available in GRCh38 in \"genemap2.txt\" ($OMIMfileDownloaded)\n    set OMIMfileDownloaded [glob -nocomplain \"$omimDir/genemap2.txt\"]\n    \n    # Header:\n    # Chromosome    Genomic Position Start  Genomic Position End    Cyto Location   Computed Cyto Location  MIM Number      Gene/Locus And Other Related Symbols    Gene Name       Approved Gene Symbol    Entrez Gene IDEnsembl Gene ID  Comments        Phenotypes      Mouse Gene Symbol/ID\n    \n    set OMIMfile1FormattedGzip [glob -nocomplain \"$omimDir/*_OMIM-1-annotations.tsv.gz\"]\n    set OMIMfile2FormattedGzip [glob -nocomplain \"$omimDir/*_OMIM-2-annotations.tsv.gz\"]\n    \n    if {$OMIMfileDownloaded eq \"\"} {\n        # No OMIM annotation to do\n        return\n    }\n    \n    if {[llength $OMIMfile1FormattedGzip]>1} {\n        puts \"Several OMIM files exist:\"\n        puts \"$OMIMfile1FormattedGzip\"\n        puts \"Keep only one: [lindex $OMIMfile1FormattedGzip end]\\n\"\n        foreach omim [lrange $OMIMfile1FormattedGzip 0 end-1] {\n            file rename -force $omim $omim.notused\n        }\n        set OMIMfile1FormattedGzip [lindex $OMIMfile1FormattedGzip end]\n    }\n    if {[llength $OMIMfile2FormattedGzip]>1} {\n        puts \"Several OMIM files exist:\"\n        puts \"$OMIMfile2FormattedGzip\"\n        puts \"Keep only one: [lindex $OMIMfile2FormattedGzip end]\\n\"\n        foreach omim [lrange $OMIMfile2FormattedGzip 0 end-1] {\n            file rename -force $omim $omim.notused\n        }\n        set OMIMfile2FormattedGzip [lindex $OMIMfile2FormattedGzip end]\n    }\n    \n    if {$OMIMfile1FormattedGzip ne \"\" && $OMIMfile2FormattedGzip ne \"\"} {return}\n    \n    \n    ## - Create the 'date'_OMIM-1-annotations.tsv and 'date'_OMIM-2-annotations.tsv files (headers):\n    ##   Header1: genes, OMIM_ID\n    ##   Header2: genes, OMIM_phenotype, OMIM_inheritance\n    \n    set OMIMfile1Formatted \"$omimDir/[clock format [clock seconds] -format \"%Y%m%d\"]_OMIM-1-annotations.tsv\"\n    set OMIMfile2Formatted \"$omimDir/[clock format [clock seconds] -format \"%Y%m%d\"]_OMIM-2-annotations.tsv\"\n    puts \"\\t...creation of [file tail $OMIMfile1Formatted.gz] and [file tail $OMIMfile2Formatted] ([clock format [clock seconds] -format \"%B %d %Y - %H:%M\"])\"\n    puts \"\\t   (in [file dirname $OMIMfile1Formatted.gz])\"\n    ReplaceTextInFile \"genes\\tOMIM_ID\" $OMIMfile1Formatted\n    ReplaceTextInFile \"genes\\tOMIM_phenotype\\tOMIM_inheritance\" $OMIMfile2Formatted\n    \n    \n    # Parsing of the GRCh38 $OMIMfileDownloaded\n    foreach L [LinesFromFile $OMIMfileDownloaded] {\n        \n        set Ls [split $L \"\\t\"]\n        # Header of \"genemap2.txt\":\n        ###########################\n        # # Chromosome\n        # Genomic Position Start\n        # Genomic Position End\n        # Cyto Location\n        # Computed Cyto Location\n        # MIM Number\n        # Gene/Locus And Other Related Symbols\n        # Gene Name\n        # Approved Gene Symbol\n        # Entrez Gene ID\n        # Ensembl Gene ID\n        # Comments\n        # Phenotypes\n        # Mouse Gene Symbol/ID\n        if {[regexp \"^# Chromosome\\tGenomic\" $L]} {\n            set i_chrom [lsearch -exact $Ls \"# Chromosome\"]\n            if {$i_chrom == -1} {\n                puts \"$OMIMfileDownloaded:\\nBad header line syntax. \\\"# Chromosome\\\" column not found - Exit with error\"\n                exit 2\n            }\n            set i_start [lsearch -exact $Ls \"Genomic Position Start\"]\n            if {$i_start == -1} {\n                puts \"$OMIMfileDownloaded:\\nBad header line syntax. \\\"Genomic Position Start\\\" column not found - Exit with error\"\n                exit 2\n            }\n            set i_end [lsearch -exact $Ls \"Genomic Position End\"]\n            if {$i_end == -1} {\n                puts \"$OMIMfileDownloaded:\\nBad header line syntax. \\\"Genomic Position End\\\" column not found - Exit with error\"\n                exit 2\n            }\n            set i_gene1 [lsearch -exact $Ls \"Gene/Locus And Other Related Symbols\"]\n            if {$i_gene1 == -1} {\n                puts \"$OMIMfileDownloaded:\\nBad header line syntax. \\\"Gene/Locus And Other Related Symbols\\\" column not found - Exit with error\"\n                exit 2\n            }\n            set i_gene2 [lsearch -exact $Ls \"Approved Gene Symbol\"]\n            if {$i_gene2 == -1} {\n                puts \"$OMIMfileDownloaded:\\nBad header line syntax. \\\"Approved Symbol\\\" column not found - Exit with error\"\n                exit 2\n            }\n            set i_mim [lsearch -exact $Ls \"MIM Number\"]\n            if {$i_mim == -1} {\n                puts \"$OMIMfileDownloaded:\\nBad header line syntax. \\\"Mim Number\\\" column not found - Exit with error\"\n                exit 2\n            }\n            set i_pheno [lsearch -exact $Ls \"Phenotypes\"]\n            if {$i_pheno == -1} {\n                puts \"$OMIMfileDownloaded\\nBad header line syntax. \\\"Phenotypes\\\" column not found - Exit with error\"\n                exit 2\n            }\n            continue\n        }\n        if {[regexp \"^#\" $L]} {continue}\n        \n        regsub \"chr\" [lindex $Ls $i_chrom] \"\" trueChromOMIM\n        set trueStartOMIM [lindex $Ls $i_start]\n        set trueEndOMIM [lindex $Ls $i_end]\n        \n        set gene1 [lindex $Ls $i_gene1]\n        regsub -all \" \" $gene1 \"\" gene1\n        \n        set gene2 [lindex $Ls $i_gene2]\n        set allGenesTmp [split $gene1 \",\"]\n        if {$gene2 ne \"\"} {lappend allGenesTmp $gene2}\n        \n        set allGenesTmp [lsort -unique $allGenesTmp]\n        \n        # In \"genemap2.txt\", we only keep the gene names overlapping the given genomic coordinates associated with the OMIM\n        # Example line:\n        # chr2    47806920        47906498        2p21    2p16.3  607871  FBXO11, FBX11, VIT1, PRMT9, IDDFBA      F-box only protein 11   FBXO11  80204   ENSG00000138081 ?2p16   Intellectual developmental disorder with dysmorphic facies and behavioral abnormalities, 618089 (3), Autosomal dominant        Fbxo11 (MGI:2147134)\n        # => PRMT9 (previous symbol) is located on chromosome 4\n        # => we don't keep this gene for the OMIM \"607871\"\n        set allGenes \"\"\n        foreach gTmp $allGenesTmp {\n            if {$gTmp eq \"\"} {continue}\n            \n            if {[info exists g_L_coord($gTmp)]} {\n                foreach coord $g_L_coord($gTmp) {\n                    set chrom [lindex $coord 0]\n                    set start [lindex $coord 1]\n                    set end [lindex $coord 2]\n                    if {$trueChromOMIM ne $chrom} {continue}\n                    if {($start < $trueStartOMIM && $end > $trueStartOMIM) || ($start > $trueStartOMIM && $start < $trueEndOMIM)} {\n                        lappend allGenes $gTmp\n                        # Add the alias for genes validated with coordinates\n                        if {[info exists g_alias($gTmp)]} {\n                            lappend allGenes {*}$g_alias($gTmp)\n                        }\n                        break\n                    }\n                }\n            }\n        }\n        if {$allGenes eq \"\"} {continue}\n        set allGenes [lsort -unique $allGenes]\n        \n        set mim [lindex $Ls $i_mim]\n        set phenoTmp [lindex $Ls $i_pheno]\n        regsub -all -nocase \"Autosomal dominant\" $phenoTmp \"AD\" phenoTmp\n        regsub -all -nocase \"Autosomal recessive\" $phenoTmp \"AR\" phenoTmp\n        regsub -all -nocase \"X-linked dominant\" $phenoTmp \"XLD\" phenoTmp\n        regsub -all -nocase \"X-linked recessive\" $phenoTmp \"XLR\" phenoTmp\n        regsub -all -nocase \"Y-linked dominant\" $phenoTmp \"YLD\" phenoTmp\n        regsub -all -nocase \"Y-linked recessive\" $phenoTmp \"YLR\" phenoTmp\n        regsub -all -nocase \"X-linked\" $phenoTmp \"XL\" phenoTmp\n        regsub -all -nocase \"Y-linked\" $phenoTmp \"YL\" phenoTmp\n        \n        foreach p [split $phenoTmp \";\"] {\n            if {[regexp \" *(.*\\\\\\(\\[0-9\\]+\\\\\\)),? *(.*)\" $p match 1pheno 1inher]} {\n                if {$1inher ne \"\"} {\n                    regsub -all \" *, +\" $1inher \",\" 1inher\n                    foreach g $allGenes {\n                        regsub -all \" \" $g \"\" g\n                        if {$g eq \"\"} {continue}\n                        lappend Pheno($g) \"$1pheno $1inher\"\n                        lappend Inheritance($g) {*}[split $1inher \";\"]\n                    }\n                } else {\n                    foreach g $allGenes {\n                        regsub -all \" \" $g \"\" g\n                        if {$g eq \"\"} {continue}\n                        lappend Pheno($g) \"$1pheno\"\n                    }\n                }\n                foreach g $allGenes {\n                    regsub -all \" \" $g \"\" g\n                    if {$g eq \"\"} {continue}\n                    lappend L_genes $g\n                    lappend Mim($g) $mim\n                }\n            }\n        }\n    }\n    \n    # creation of $OMIMfileFormatted.gz\n    set L_genes [lsort -unique $L_genes]\n    # Header :\n    # Gene    OMIM_ID\n    # Gene    OMIM_phenotype      OMIM_inheritance\n    foreach g $L_genes {\n        set Pheno($g) \"[join [lsort -unique $Pheno($g)] \";\"]\"\n        if {![info exists Inheritance($g)]} {set Inheritance($g) \"\"}\n        set Inheritance($g) \"[join [lsort -unique $Inheritance($g)] \";\"]\"\n        if {[regexp \"^;+$\" $Inheritance($g)]} {set Inheritance($g) \"\"}\n        WriteTextInFile \"$g\\t[join [lsort -unique $Mim($g)] \";\"]\" $OMIMfile1Formatted\n        WriteTextInFile \"$g\\t$Pheno($g)\\t$Inheritance($g)\" $OMIMfile2Formatted\n    }\n    if {[catch {exec gzip $OMIMfile1Formatted} Message]} {\n        puts \"-- checkOMIMfile --\"\n        puts \"gzip $OMIMfile1Formatted\"\n        puts \"$Message\\n\"\n    }\n    if {[catch {exec gzip $OMIMfile2Formatted} Message]} {\n        puts \"-- checkOMIMfile --\"\n        puts \"gzip $OMIMfile2Formatted\"\n        puts \"$Message\\n\"\n    }\n    \n    file delete -force $OMIMfileDownloaded\n}\n\n## - Check if the \"morbidmap.txt\" file exists.\n## - Check and create if necessary the 'date'_morbid.tsv.gz file.\n## - Check and create if necessary the 'date'_morbidCandidate.tsv.gz file.\nproc checkMorbidfile {} {\n    \n    global g_AnnotSV\n    global g_alias\n    global g_L_coord\n    \n    set omimDir \"$g_AnnotSV(annotationsDir)/Annotations_$g_AnnotSV(organism)/Gene-based/OMIM\"\n    \n    ## Check if the Morbid file has been downloaded the formatted\n    ##################################################################\n    set MorbidFileDownloaded [glob -nocomplain \"$omimDir/morbidmap.txt\"]\n    # Header:\n    # # Phenotype     Gene/Locus And Other Related Symbols    MIM Number      Cyto Location\n    set MorbidFileFormattedGzip [glob -nocomplain \"$omimDir/*_morbid.tsv.gz\"]\n    set MorbidCandidateFileFormattedGzip [glob -nocomplain \"$omimDir/*_morbidCandidate.tsv.gz\"]\n    \n    if {$MorbidFileDownloaded eq \"\" && $MorbidFileFormattedGzip eq \"\"} {\n        # No Morbid annotation\n        return\n    }\n    \n    if {[llength $MorbidFileFormattedGzip]>1} {\n        puts \"Several Morbid Genes files exist:\"\n        puts \"$MorbidFileFormattedGzip\"\n        puts \"Keep only one: [lindex $MorbidFileFormattedGzip end]\\n\"\n        foreach morbid [lrange $MorbidFileFormattedGzip 0 end-1] {\n            file rename -force $morbid $morbid.notused\n        }\n        return\n    }\n    if {[llength $MorbidCandidateFileFormattedGzip]>1} {\n        puts \"Several Morbid Genes candidate files exist:\"\n        puts \"$MorbidCandidateFileFormattedGzip\"\n        puts \"Keep only one: [lindex $MorbidCandidateFileFormattedGzip end]\\n\"\n        foreach morbid [lrange $MorbidCandidateFileFormattedGzip 0 end-1] {\n            file rename -force $morbid $morbid.notused\n        }\n        return\n    }\n    \n    if {$MorbidFileFormattedGzip eq \"\"} {\n        ## - Create the 'date'_morbid.tsv file.\n        ##   Header: genes, OMIM_morbid\n        ## - Create the 'date'_morbidCandidate.tsv.gz file.\n        ##   Header: genes, OMIM_morbid_candidate\n        \n        set MorbidFileFormatted \"$omimDir/[clock format [clock seconds] -format \"%Y%m%d\"]_morbid.tsv\"\n        set MorbidCandidateFileFormatted \"$omimDir/[clock format [clock seconds] -format \"%Y%m%d\"]_morbidCandidate.tsv\"\n        puts \"\\t...creation of [file tail $MorbidFileFormatted.gz] and [file tail $MorbidCandidateFileFormatted] ([clock format [clock seconds] -format \"%B %d %Y - %H:%M\"])\"\n        puts \"\\t   (in [file dirname $MorbidFileFormatted.gz])\"\n        ReplaceTextInFile \"genes\\tOMIM_morbid\" $MorbidFileFormatted\n        ReplaceTextInFile \"genes\\tOMIM_morbid_candidate\" $MorbidCandidateFileFormatted\n        \n        # Parsing of $MorbidFileDownloaded\n        set L_morbid {}\n        set L_morbidCandidate {}\n        foreach L [LinesFromFile $MorbidFileDownloaded] {\n            set Ls [split $L \"\\t\"]\n            \n            # Header from the downloaded file:\n            # Phenotype     Gene Symbols    MIM Number      Cyto Location\n            if {[regexp \"^# Phenotype\\t\" $L]} {\n                set i_gene  [lsearch $Ls \"Gene/Locus And Other Related Symbols\"]\n                if {$i_gene == -1} {\n                    puts \"Bad header line syntax. \\\"Gene/Locus And Other Related Symbols\\\" column not found - Exit with error\"\n                    exit 2\n                }\n                set i_pheno [lsearch $Ls \"# Phenotype\"]\n                if {$i_pheno == -1} {\n                    puts \"Bad header line syntax. Phenotype column not found - Exit with error\"\n                    exit 2\n                }\n                continue\n            }\n            if {[regexp \"^#\" $L]} {continue}\n            \n            set pheno [lindex $Ls $i_pheno]\n            \n            ## \"[ ]\", indicate \"nondiseases\", mainly genetic variations that lead to apparently abnormal laboratory test values (e.g., dysalbuminemic euthyroidal hyperthyroxinemia).\n            if {[regexp \"^\\\\\\[.+\\\\\\]\" $pheno]} {continue}\n            \n            ## (1) The disorder is placed on the map based on its association with a gene, but the underlying defect is not known.\n            ## (2) The disorder has been placed on the map by linkage or other statistical method; no mutation has been found.\n            if {[regexp \"\\\\\\(1\\\\\\)|\\\\\\(2\\\\\\)\" $pheno]} {continue}\n            \n            ## The following lines are automatically either (3) or (4):\n            ## (3) indicates that the molecular basis of the disorder is known; a mutation has been found in the gene.\n            ## (4) indicates that a contiguous gene deletion or duplication syndrome, multiple genes are deleted or duplicated causing the phenotype.\n            set gene [lindex $Ls $i_gene]\n            set allGenes [split $gene \",\"]\n            set allGenes [lsort -unique $allGenes]\n            foreach g $allGenes {\n                regsub -all \" \" $g \"\" g\n                if {$g eq \"\"} {continue}\n                ## \"{ }\", indicate mutations that contribute to susceptibility to multifactorial disorders (e.g., diabetes, asthma) or to susceptibility to infection (e.g., malaria).\n                ## \"?\", before the phenotype name indicates that the relationship between the phenotype and gene is provisional.\n                \n                # Add the gene names (approved symbol + other related symbol)\n                if {[regexp \"^{.+}|^\\\\\\?\" $pheno]} {\n                    if {[info exists g_alias($g)]} {\n                        lappend L_morbidCandidate {*}$g_alias($g)\n                    } else {\n                        lappend L_morbidCandidate $g\n                    }\n                } else {\n                    if {[info exists g_alias($g)]} {\n                        lappend L_morbid {*}$g_alias($g)\n                    } else {\n                        lappend L_morbid $g\n                    }\n                }\n            }\n        }\n        \n        # creation of $MorbidFileFormatted.gz\n        set L_morbid [lsort -unique $L_morbid]\n        \n        ## created header: genes, OMIM_morbid\n        foreach g $L_morbid {\n            WriteTextInFile \"$g\\tyes\" $MorbidFileFormatted\n        }\n        \n        if {[catch {exec gzip $MorbidFileFormatted} Message]} {\n            puts \"-- checkMorbidfile --\"\n            puts \"gzip $MorbidFileFormatted\"\n            puts \"$Message\\n\"\n        }\n        \n        # creation of $MorbidCandidateFileFormatted.gz\n        set L_morbidCandidate [lsort -unique $L_morbidCandidate]\n        ## creted header: genes, OMIM_morbid_candidate\n        foreach g $L_morbidCandidate {\n            WriteTextInFile \"$g\\tyes\" $MorbidCandidateFileFormatted\n        }\n        if {[catch {exec gzip $MorbidCandidateFileFormatted} Message]} {\n            puts \"-- checkMorbidfile --\"\n            puts \"gzip $MorbidCandidateFileFormatted\"\n            puts \"$Message\\n\"\n        }\n        \n        file delete -force $MorbidFileDownloaded\n    }\n    \n    # Defined in memorizeGeneNameAlias\n    unset g_alias\n    unset g_L_coord\n}\n\n\nproc fromOMIMtoPhenotype {OMIM} {\n    global g_AnnotSV\n    global g_phen\n    global g_gene\n    \n    if { ! [info exists g_phen(DONE)]} {\n        set OMIMfile1 [glob -nocomplain \"$g_AnnotSV(annotationsDir)/Annotations_$g_AnnotSV(organism)/Gene-based/OMIM/*_OMIM-1-annotations.tsv.gz\"]\n        # 20201107_OMIM-1-annotations.tsv.gz\n        # Header = genes   OMIM_ID\n        foreach L [LinesFromGZFile $OMIMfile1] {\n            set Ls [split $L \"\\t\"]\n            set gene [lindex $Ls 0]\n            set L_omim [split [lindex $Ls 1] \";\"]\n            foreach omim $L_omim {\n                lappend g_gene($omim) $gene\n            }\n        }\n        \n        set OMIMfile2 [glob -nocomplain \"$g_AnnotSV(annotationsDir)/Annotations_$g_AnnotSV(organism)/Gene-based/OMIM/*_OMIM-2-annotations.tsv.gz\"]\n        # 20201107_OMIM-2-annotations.tsv.gz\n        # Header = genes   OMIM_phenotype      OMIM_inheritance\n        foreach L [LinesFromGZFile $OMIMfile2] {\n            set Ls [split $L \"\\t\"]\n            set gene [lindex $Ls 0]\n            set phenotype [lindex $Ls 1]\n            regsub -all \"\\\\\\{|\\\\\\}|\\\\\\[|\\\\\\]\" $phenotype \"\" phenotype\n            regsub -all \"/\" $phenotype \";\" phenotype\n            set g_phen($gene) $phenotype\n        }\n        \n        set g_phen(DONE) 1\n    }\n    \n    set phenotype \"\"\n    if {[info exists g_gene($OMIM)]} {\n        foreach gene $g_gene($OMIM) {\n            if {[info exists g_phen($gene)]} {\n                lappend phenotype $g_phen($gene)\n            }\n        }\n        set phenotype [join $phenotype \";\"]\n    }\n    \n    return $phenotype\n}\n\nproc fromOMIMgeneToPhenotype {OMIMgene} {\n    global g_AnnotSV\n    global g_phen\n    global g_gene\n    \n    if { ! [info exists g_phen(DONE)]} {\n        fromOMIMtoPhenotype 617631 ;# use to initialize \"g_phen\" and \"g_gene\"\n    }\n    \n    if {[info exists g_phen($OMIMgene)]} {\n        return $g_phen($OMIMgene)\n    } else {\n        return \"\"\n    }\n}\n\n\nproc isMorbid {gene} {\n    global g_AnnotSV\n    global g_morbid\n    \n    if {![info exists g_morbid(DONE)]} {\n        set g_morbid(DONE) 1\n        set morbidFile [glob -nocomplain \"$g_AnnotSV(annotationsDir)/Annotations_$g_AnnotSV(organism)/Gene-based/OMIM/*_morbid.tsv.gz\"]\n        if {$morbidFile ne \"\"} { ;# Doesn't exists for Mouse\n            set f [open \"| gzip -cd $morbidFile\"]\n            while {! [eof $f]} {\n                set L [gets $f]\n                set g_morbid([lindex $L 0]) 1\n            }\n            close $f\n        }\n    }\n    \n    if {[info exists g_morbid($gene)]} {\n        return 1\n    } else {\n        return 0\n    }\n}\n\n"
  },
  {
    "path": "share/tcl/AnnotSV/AnnotSV-pathogenicsnvindel.tcl",
    "content": "############################################################################################################\n# AnnotSV 3.5.8                                                                                            #\n#                                                                                                          #\n# AnnotSV: An integrated tool for Structural Variations annotation and ranking                             #\n#                                                                                                          #\n# Copyright (C) 2017-present Veronique Geoffroy (veronique.geoffroy@inserm.fr)                             #\n#                                                                                                          #\n# This is part of AnnotSV source code.                                                                     #\n#                                                                                                          #\n# This program is free software; you can redistribute it and/or                                            #\n# modify it under the terms of the GNU General Public License                                              #\n# as published by the Free Software Foundation; either version 3                                           #\n# of the License, or (at your option) any later version.                                                   #\n#                                                                                                          #\n# This program is distributed in the hope that it will be useful,                                          #\n# but WITHOUT ANY WARRANTY; without even the implied warranty of                                           #\n# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the                                            #\n# GNU General Public License for more details.                                                             #\n#                                                                                                          #\n# You should have received a copy of the GNU General Public License                                        #\n# along with this program; If not, see <http://www.gnu.org/licenses/>.                                     #\n############################################################################################################\n\n\n# Creation/update (if some data source files are presents) of:\n# - $pathoSNVindelBEDfile\nproc checkPathoSNVindelFile {} {\n    \n    global g_AnnotSV\n    \n    foreach genomeBuild {GRCh37 GRCh38} {\n        ## Check if ClinVar file has been downloaded\n        ############################################\n        set pathoSNVindelDir \"$g_AnnotSV(annotationsDir)/Annotations_$g_AnnotSV(organism)/FtIncludedInSV/PathogenicSNVindel/$genomeBuild\"\n        set ClinVarFileDownloaded [lindex [glob -nocomplain \"$pathoSNVindelDir/clinvar*.vcf.gz\"] end]\n        \n        if {$ClinVarFileDownloaded ne \"\"} {\n            # We have some ClinVar annotations to parse\n            puts \"\\t   ...$genomeBuild pathogenic SNV/indels configuration ([clock format [clock seconds] -format \"%B %d %Y - %H:%M\"])\"\n            \n            set pathoSNVindelBEDfile \"$pathoSNVindelDir/pathogenic_SNVindel_$genomeBuild.bed\"\n            file delete -force $pathoSNVindelBEDfile\n            set L_toWrite {}\n            set f [open \"| gzip -cd $ClinVarFileDownloaded\"]\n            while {! [eof $f]} {\n                set L [gets $f]\n                set Ls [split $L \"\\t\"]\n                if {[regexp \"^#\" $L]} {continue}\n                set infos [lindex $Ls 7]\n                \n                # Selection of the pathogenic variants to keep:\n                ###########################################\n                # Criteria:\n                # - “pathogenic” or “pathogenic/likely pathogenic” clinical significance (CLNSIG)\n                # - “criteria_provided”, “_multiple_submitters” or “reviewed_by_expert_panel” SV review status (CLNREVSTAT)\n                # - < $g_AnnotSV(SVminSize) bp in size (default 50)\n                if {![regexp \"ALLELEID=(\\[^;\\]+)?;.*CLNDISDB=(\\[^;\\]+)?;.*CLNDN\\[INCL\\]*=(\\[^;\\]+)?;.*CLNREVSTAT=(\\[^;\\]+)?;.*CLNSIG=Pathogenic\" $infos match ALLELEID CLNDISDB CLNDN CLNREVSTAT]} {continue}\n                if {![regexp \"criteria_provided|_multiple_submitters|reviewed_by_expert_panel\" $CLNREVSTAT]} {continue}\n                if {[regexp \"no_assertion_criteria_provided\" $CLNREVSTAT]} {continue}\n                \n                set ref [lindex $Ls 3]\n                set alt [lindex $Ls 4]\n                set SVlength [expr {abs([string length $ref]-[string length $alt])+1}]\n                if {$SVlength >= $g_AnnotSV(SVminSize)} {continue}\n                set chrom [lindex $Ls 0]\n                set start [lindex $Ls 1]\n                set end [expr {$start+$SVlength}]\n                set coord \"${chrom}:${start}-$end\"\n                \n                # CLNDISDB example :\n                # Human_Phenotype_Ontology:HP:0000556,Human_Phenotype_Ontology:HP:0007736,Human_Phenotype_Ontology:HP:0007910,Human_Phenotype_Ontology:HP:0007974,Human_Phenotype_Ontology:HP:0007982,MONDO:MONDO:0019118,MeSH:D058499,MedGen:C0854723,Orphanet:ORPHA71862,SNOMED_CT:314407005|MONDO:MONDO:0012056,MedGen:C1837873,OMIM:608553|MedGen:CN517202\n                set L_HPO {}\n                set i 0\n                while {[regexp -start $i -indices \"Human_Phenotype_Ontology:HP:\\[0-9\\]+\" $CLNDISDB indices]} {\n                    set HPO [string range $CLNDISDB [lindex $indices 0] [lindex $indices 1]]\n                    regsub \"^Human_Phenotype_Ontology:\" $HPO \"\" HPO\n                    lappend L_HPO $HPO\n                    set i [lindex $indices 1]\n                }\n                regsub \"(\\\\\\|)?not_provided\" $CLNDN \"\" CLNDN\n                set toWrite \"$chrom\\t$start\\t$end\\t$CLNDN\\t$L_HPO\\tCLN:$ALLELEID\\t$coord\"\n                lappend L_toWrite \"$toWrite\"\n            }\n            close $f\n            \n            # Writing:\n            ##########\n            puts \"\\t       ([llength $L_toWrite] pathogenic SNV/indel)\"\n            if {$L_toWrite ne {}} {\n                WriteTextInFile [join $L_toWrite \"\\n\"] $pathoSNVindelBEDfile\n            }\n            \n            # Clean:\n            ########\n            file delete -force $ClinVarFileDownloaded\n            \n            # Creation of *.formatted.bed\n            #############################\n            if {[file exists $pathoSNVindelBEDfile]} {\n                regsub \".bed$\" $pathoSNVindelBEDfile \".formatted.bed\" pathoSNVindelBEDfile_Formatted\n                if {[catch {checkBed $pathoSNVindelBEDfile $pathoSNVindelDir} Message]} {\n                    puts \"-- checkPathoSNVindelFile --\"\n                    puts $Message\n                }\n                file delete -force $pathoSNVindelBEDfile\n            }\n            \n            # Creation of *.sorted.bed\n            ##########################\n            if {[file exists $pathoSNVindelBEDfile_Formatted]} {\n                regsub \".bed$\" $pathoSNVindelBEDfile \".sorted.bed\" pathoSNVindelBEDfile_Sorted\n                # Intersection with very large files can cause trouble with excessive memory usage.\n                # A presort of the bed files by chromosome and then by start position combined with the use of the -sorted option will invoke a memory-efficient algorithm.\n                set sortTmpFile \"$g_AnnotSV(outputDir)/[clock format [clock seconds] -format \"%Y%m%d-%H%M%S\"]_[pid]_sort.tmp.bash\"\n                ReplaceTextInFile \"#!/bin/bash\" $sortTmpFile\n                WriteTextInFile \"# The locale specified by the environment can affects the traditional sort order. We need to use native byte values.\" $sortTmpFile\n                WriteTextInFile \"export LC_ALL=C\" $sortTmpFile\n                WriteTextInFile \"sort -k1,1 -k2,2n $pathoSNVindelBEDfile_Formatted > $pathoSNVindelBEDfile_Sorted\" $sortTmpFile\n                file attributes $sortTmpFile -permissions 0755\n                if {[catch {eval exec bash $sortTmpFile} Message]} {\n                    puts \"-- checkPathoSNVindelFile --\"\n                    puts \"sort -k1,1 -k2,2n $pathoSNVindelBEDfile_Formatted > $pathoSNVindelBEDfile_Sorted\"\n                    puts \"$Message\"\n                    puts \"Exit with error\"\n                    exit 2\n                }\n                file delete -force $sortTmpFile\n                file delete -force $pathoSNVindelBEDfile_Formatted\n            }\n        }\n    }\n    \n    return\n}\n\n\n\n# Return the overlapped SV annotation\nproc pathoSNVindelAnnotation {SVchrom SVstart SVend} {\n    \n    global g_AnnotSV\n    global pathoSNVindelText\n    \n    set pathoSNVindelDir \"$g_AnnotSV(annotationsDir)/Annotations_$g_AnnotSV(organism)/FtIncludedInSV/PathogenicSNVindel/$g_AnnotSV(genomeBuild)\"\n    set pathoSNVindelBEDfile \"$pathoSNVindelDir/pathogenic_SNVindel_$g_AnnotSV(genomeBuild).sorted.bed\"\n    \n    if {![info exists pathoSNVindelText(DONE)]} {\n        # headerOutput:  P_snvindel_nb P_snvindel_phen\n        set pathoSNVindelText(Empty) \"\\t\"\n        \n        # Intersect\n        if {[file exists $pathoSNVindelBEDfile]} {\n            regsub -nocase \"(.formatted)?.bed$\" $g_AnnotSV(bedFile) \".intersect.pathogenic-snvindel\" tmpFile\n            set tmpFile \"$g_AnnotSV(outputDir)/[file tail $tmpFile]\"\n            file delete -force $tmpFile\n            # -f 1.0 : the feature in B overlaps at least 100% of the A feature.\n            if {[catch {exec $g_AnnotSV(bedtools) intersect -sorted -a $pathoSNVindelBEDfile -b $g_AnnotSV(fullAndSplitBedFile) -f 1.0 -wa -wb > $tmpFile} Message]} {\n                if {[catch {exec $g_AnnotSV(bedtools) intersect -a $pathoSNVindelBEDfile -b $g_AnnotSV(fullAndSplitBedFile) -f 1.0 -wa -wb > $tmpFile} Message]} {\n                    puts \"-- pathoSNVindelAnnotation --\"\n                    puts \"$g_AnnotSV(bedtools) intersect -sorted -a $pathoSNVindelBEDfile -b $g_AnnotSV(fullAndSplitBedFile) -f 1.0 -wa -wb > $tmpFile\"\n                    puts \"$Message\"\n                    puts \"Exit with error\"\n                    exit 2\n                }\n            }\n            # Parse\n            set f [open $tmpFile]\n            while {![eof $f]} {\n                set L [gets $f]\n                if {$L eq \"\"} {continue}\n                set Ls [split $L \"\\t\"]\n                \n                set pathogenic_phen [lindex $Ls 3]\n                #set pathogenic_hpo [lindex $Ls 4]\n                #set pathogenic_source [lindex $Ls 5]\n                #set pathogenic_coord [lindex $Ls 6]\n                \n                set SVtoAnn_chrom [lindex $Ls 7]\n                set SVtoAnn_start [lindex $Ls 8]\n                set SVtoAnn_end   [lindex $Ls 9]\n                \n                set SVtoAnn \"$SVtoAnn_chrom,$SVtoAnn_start,$SVtoAnn_end\"\n                lappend L_allSVtoAnn $SVtoAnn\n                foreach p [split $pathogenic_phen \"|\"] {\n                    if {$p ne \"\"} {lappend L_pathogenic_phen($SVtoAnn) \"$p\"}\n                }\n                if {![info exists L_pathogenic_phen($SVtoAnn)]} {set L_pathogenic_phen($SVtoAnn) {}}\n                #lappend L_pathogenic_hpo($SVtoAnn) {*}[split $pathogenic_hpo \"|\"]\n                #lappend L_pathogenic_source($SVtoAnn) $pathogenic_source\n                #lappend L_pathogenic_coord($SVtoAnn) $pathogenic_coord\n                if {[info exists nb_snvindel($SVtoAnn)]} {\n                    incr nb_snvindel($SVtoAnn)\n                } else {\n                    set nb_snvindel($SVtoAnn) 1\n                }\n            }\n            file delete -force $tmpFile\n            \n            # Loading pathogenic snvindel final annotation for each SV\n            if {[info exists L_allSVtoAnn]} {\n                foreach SVtoAnn [lsort -unique $L_allSVtoAnn] {\n                    lappend L_pathoSNVindelText($SVtoAnn) $nb_snvindel($SVtoAnn)\n                    lappend L_pathoSNVindelText($SVtoAnn) \"[join [lsort -unique $L_pathogenic_phen($SVtoAnn)] \";\"]\"\n                    #lappend L_pathoSNVindelText($SVtoAnn) \"[join $L_pathogenic_hpo($SVtoAnn) \";\"]\"\n                    #lappend L_pathoSNVindelText($SVtoAnn) \"[join $L_pathogenic_source($SVtoAnn) \";\"]\"\n                    #lappend L_pathoSNVindelText($SVtoAnn) \"[join $L_pathogenic_coord($SVtoAnn) \";\"]\"\n                    set pathoSNVindelText($SVtoAnn) [join $L_pathoSNVindelText($SVtoAnn) \"\\t\"]\n                }\n            }\n        }\n        set pathoSNVindelText(DONE) 1\n    }\n    \n    if {[info exist pathoSNVindelText($SVchrom,$SVstart,$SVend)]} {\n        return $pathoSNVindelText($SVchrom,$SVstart,$SVend)\n    } else {\n        return $pathoSNVindelText(Empty)\n    }\n}\n\n"
  },
  {
    "path": "share/tcl/AnnotSV/AnnotSV-pathogenicsv.tcl",
    "content": "############################################################################################################\n# AnnotSV 3.5.8                                                                                            #\n#                                                                                                          #\n# AnnotSV: An integrated tool for Structural Variations annotation and ranking                             #\n#                                                                                                          #\n# Copyright (C) 2017-present Veronique Geoffroy (veronique.geoffroy@inserm.fr)                             #\n#                                                                                                          #\n# This is part of AnnotSV source code.                                                                     #\n#                                                                                                          #\n# This program is free software; you can redistribute it and/or                                            #\n# modify it under the terms of the GNU General Public License                                              #\n# as published by the Free Software Foundation; either version 3                                           #\n# of the License, or (at your option) any later version.                                                   #\n#                                                                                                          #\n# This program is distributed in the hope that it will be useful,                                          #\n# but WITHOUT ANY WARRANTY; without even the implied warranty of                                           #\n# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the                                            #\n# GNU General Public License for more details.                                                             #\n#                                                                                                          #\n# You should have received a copy of the GNU General Public License                                        #\n# along with this program; If not, see <http://www.gnu.org/licenses/>.                                     #\n############################################################################################################\n\n\n# Creation/update (if some data source files are presents) of:\n# - $pathogenicLossFile_Sorted\n# - $pathogenicGainFile_Sorted\n# - $pathogenicInsFile_Sorted\n# - $pathogenicInvFile_Sorted\nproc checkPathogenicFiles {} {\n    \n    global g_AnnotSV\n    \n    foreach genomeBuild {GRCh37 GRCh38 CHM13} {\n        set pathogenicDir \"$g_AnnotSV(annotationsDir)/Annotations_$g_AnnotSV(organism)/FtIncludedInSV/PathogenicSV/$genomeBuild\"\n        \n        # Files to create/update\n        set pathogenicLossFile_Sorted \"$pathogenicDir/pathogenic_Loss_SV_$genomeBuild.sorted.bed\"\n        set pathogenicGainFile_Sorted \"$pathogenicDir/pathogenic_Gain_SV_$genomeBuild.sorted.bed\"\n        set pathogenicInsFile_Sorted \"$pathogenicDir/pathogenic_Ins_SV_$genomeBuild.sorted.bed\"\n        set pathogenicInvFile_Sorted \"$pathogenicDir/pathogenic_Inv_SV_$genomeBuild.sorted.bed\"\n        \n        # Text to write only if an update of the sources is requested (in the check* proc).\n        set g_AnnotSV(pathogenicText) \"\\t...creation/update of the \\\"pathogenic_*_SV_$genomeBuild.sorted.bed\\\" files ([clock format [clock seconds] -format \"%B %d %Y - %H:%M\"])\\n\\t   (done only once)\"\n        \n        # Creation of pathogenic*File_Tmp (not formatted and sorted)\n        set pathogenicLossFile_Tmp \"$pathogenicDir/pathogenic_Loss_SV_$genomeBuild.tmp.bed\"\n        set pathogenicGainFile_Tmp \"$pathogenicDir/pathogenic_Gain_SV_$genomeBuild.tmp.bed\"\n        set pathogenicInsFile_Tmp \"$pathogenicDir/pathogenic_Ins_SV_$genomeBuild.tmp.bed\"\n        set pathogenicInvFile_Tmp \"$pathogenicDir/pathogenic_Inv_SV_$genomeBuild.tmp.bed\"\n        file delete -force $pathogenicLossFile_Tmp\n        file delete -force $pathogenicGainFile_Tmp\n        file delete -force $pathogenicInsFile_Tmp\n        file delete -force $pathogenicInvFile_Tmp\n        checkClinVar_PathogenicFile $genomeBuild\n        checkClinGenHITS_pathogenicFile $genomeBuild\n        checkdbVar_PathogenicFile $genomeBuild\n        checkOMIM_PathogenicFile $genomeBuild\n        catch {unset g_AnnotSV(pathogenicText)}\n        \n        # Creation of *.formatted.bed\n        foreach SVtype {Loss Gain Ins Inv} {\n            set pathogenicFile_Sorted \"$pathogenicDir/pathogenic_${SVtype}_SV_$genomeBuild.sorted.bed\"\n            set pathogenicFile_Tmp \"$pathogenicDir/pathogenic_${SVtype}_SV_$genomeBuild.tmp.bed\"\n            if {[file exists $pathogenicFile_Tmp]} {\n                # Add the SV from $pathogenic*File_Sorted\n                if {[file exists $pathogenicFile_Sorted]} {\n                    set id_file1 [open \"$pathogenicFile_Sorted\" r]\n                    set id_file2 [open \"$pathogenicFile_Tmp\" a]\n                    while { [gets $id_file1 line] >= 0 } {\n                        puts $id_file2 $line\n                    }\n                    close $id_file1\n                    close $id_file2\n                }\n                # Sort:\n                # -> Creation of $pathogenicFile_Tmp.formatted.bed\n                if {[catch {checkBed $pathogenicFile_Tmp $pathogenicDir} Message]} {\n                    puts \"-- checkPathogenicFiles --\"\n                    puts $Message\n                }\n                \n                file delete -force $pathogenicFile_Tmp\n            }\n        }\n        \n        # Creation of *.sorted.bed:\n        # Intersection with very large files can cause trouble with excessive memory usage.\n        # A presort of the bed files by chromosome and then by start position combined with the use of the -sorted option will invoke a memory-efficient algorithm.\n        foreach SVtype {Loss Gain Ins Inv} {\n            set pathogenicFile_TmpFormatted \"$pathogenicDir/pathogenic_${SVtype}_SV_$genomeBuild.tmp.formatted.bed\"\n            if {![file exist $pathogenicFile_TmpFormatted]} {continue}\n            set pathogenicFile_Sorted \"$pathogenicDir/pathogenic_${SVtype}_SV_$genomeBuild.sorted.bed\"\n            set sortTmpFile \"$g_AnnotSV(outputDir)/[clock format [clock seconds] -format \"%Y%m%d-%H%M%S\"]_[pid]_sort.tmp.bash\"\n            ReplaceTextInFile \"#!/bin/bash\" $sortTmpFile\n            WriteTextInFile \"# The locale specified by the environment can affects the traditional sort order. We need to use native byte values.\" $sortTmpFile\n            WriteTextInFile \"export LC_ALL=C\" $sortTmpFile\n            WriteTextInFile \"sort -k1,1 -k2,2n $pathogenicFile_TmpFormatted > $pathogenicFile_Sorted\" $sortTmpFile\n            file attributes $sortTmpFile -permissions 0755\n            if {[catch {eval exec bash $sortTmpFile} Message]} {\n                puts \"-- checkPathogenicFiles --\"\n                puts \"sort -k1,1 -k2,2n $pathogenicFile_TmpFormatted > $pathogenicFile_Sorted\"\n                puts \"$Message\"\n                puts \"Exit with error\"\n                exit 2\n            }\n            file delete -force $sortTmpFile\n            file delete -force $pathogenicFile_TmpFormatted\n        }\n    }\n    \n    # Remove some columns from g_AnnotSV(outputColHeader) if the corresponding annotation file doesn't exist\n    foreach svtype {\"Gain\" \"Loss\" \"Ins\" \"Inv\"} {\n        set pathogenicFile_Sorted \"$pathogenicDir/pathogenic_${svtype}_SV_$genomeBuild.sorted.bed\"\n        if {![file exists $pathogenicFile_Sorted]} {\n            set newList {}\n            foreach e \"$g_AnnotSV(outputColHeader)\" {\n                if {[regexp \"^P_[string tolower ${svtype}]_\" $e]} {continue}\n                lappend newList $e\n            }\n            set g_AnnotSV(outputColHeader) $newList\n        }\n    }\n    \n    return\n}\n\n\n\n\n################################################################################################\n## In all the next \"check*File\" proc, create and then complete the following file:\n##   - Pathogenic_Gain_SV_$genomeBuild.tmp.bed\n##   - Pathogenic_Loss_SV_$genomeBuild.tmp.bed\n##   - Pathogenic_Ins_SV_$genomeBuild.tmp.bed\n##   - Pathogenic_Inv_SV_$genomeBuild.tmp.bed\n################################################################################################\n\nproc checkClinVar_PathogenicFile {genomeBuild} {\n    \n    global g_AnnotSV\n    \n    ## Check if ClinVar file has been downloaded\n    ############################################\n    set pathogenicDir \"$g_AnnotSV(annotationsDir)/Annotations_$g_AnnotSV(organism)/FtIncludedInSV/PathogenicSV/$genomeBuild\"\n    set ClinVarFileDownloaded [lindex [glob -nocomplain \"$pathogenicDir/clinvar*.vcf.gz\"] end]\n    \n    if {$ClinVarFileDownloaded ne \"\"} {\n        # We have some ClinVar annotations to add in $pathogenic*File\n        if {[info exists g_AnnotSV(pathogenicText)]} {\n            puts $g_AnnotSV(pathogenicText)\n            unset g_AnnotSV(pathogenicText)\n        }\n        puts \"\\t   >>> ClinVar parsing ([clock format [clock seconds] -format \"%B %d %Y - %H:%M\"])\"\n        \n        set pathogenicLossFile_Tmp \"$pathogenicDir/pathogenic_Loss_SV_$genomeBuild.tmp.bed\"\n        set pathogenicGainFile_Tmp \"$pathogenicDir/pathogenic_Gain_SV_$genomeBuild.tmp.bed\"\n        set pathogenicInsFile_Tmp \"$pathogenicDir/pathogenic_Ins_SV_$genomeBuild.tmp.bed\"\n        set pathogenicInvFile_Tmp \"$pathogenicDir/pathogenic_Inv_SV_$genomeBuild.tmp.bed\"\n        set L_toWriteLoss {}\n        set L_toWriteGain {}\n        set L_toWriteIns {}\n        set L_toWriteInv {}\n        set f [open \"| gzip -cd $ClinVarFileDownloaded\"]\n        while {! [eof $f]} {\n            set L [gets $f]\n            set Ls [split $L \"\\t\"]\n            if {[regexp \"^#\" $L]} {continue}\n            set infos [lindex $Ls 7]\n            \n            # Selection of the pathogenic variants to keep:\n            ###########################################\n            # Criteria:\n            # - “pathogenic” or “pathogenic/likely pathogenic” clinical significance (CLNSIG)\n            # - “criteria_provided”, “_multiple_submitters” or “reviewed_by_expert_panel” SV review status (CLNREVSTAT)\n            # - \"Deletion\" or \"Duplication\" or \"Insertion\" or \"Inversion\" SV type (CLNVC)\n            # - ≥ $g_AnnotSV(SVminSize) bp in size (default 50)\n            if {![regexp \"ALLELEID=(\\[^;\\]+)?;.*CLNDISDB=(\\[^;\\]+)?;.*CLNDN\\[INCL\\]*=(\\[^;\\]+)?;.*CLNREVSTAT=(\\[^;\\]+)?;.*CLNSIG=Pathogenic.*?CLNVC=(\\[^;\\]+)?\" $infos match ALLELEID CLNDISDB CLNDN CLNREVSTAT CLNVC]} {continue}\n            if {![regexp \"criteria_provided|_multiple_submitters|reviewed_by_expert_panel\" $CLNREVSTAT]} {continue}\n            if {[regexp \"no_assertion_criteria_provided\" $CLNREVSTAT]} {continue}\n            \n            set ref [lindex $Ls 3]\n            set alt [lindex $Ls 4]\n            set SVlength [expr {abs([string length $ref]-[string length $alt])+1}]\n            if {$SVlength < $g_AnnotSV(SVminSize)} {continue}\n            set chrom [lindex $Ls 0]\n            set start [lindex $Ls 1]\n            set end [expr {$start+$SVlength}]\n            set coord \"${chrom}:${start}-$end\"\n            \n            # CLNDISDB example :\n            # Human_Phenotype_Ontology:HP:0000556,Human_Phenotype_Ontology:HP:0007736,Human_Phenotype_Ontology:HP:0007910,Human_Phenotype_Ontology:HP:0007974,Human_Phenotype_Ontology:HP:0007982,MONDO:MONDO:0019118,MeSH:D058499,MedGen:C0854723,Orphanet:ORPHA71862,SNOMED_CT:314407005|MONDO:MONDO:0012056,MedGen:C1837873,OMIM:608553|MedGen:CN517202\n            set L_HPO {}\n            set i 0\n            while {[regexp -start $i -indices \"Human_Phenotype_Ontology:HP:\\[0-9\\]+\" $CLNDISDB indices]} {\n                set HPO [string range $CLNDISDB [lindex $indices 0] [lindex $indices 1]]\n                regsub \"^Human_Phenotype_Ontology:\" $HPO \"\" HPO\n                lappend L_HPO $HPO\n                set i [lindex $indices 1]\n            }\n            regsub \"(\\\\\\|)?not_provided\" $CLNDN \"\" CLNDN\n            set toWrite \"$chrom\\t$start\\t$end\\t$CLNDN\\t$L_HPO\\tCLN:$ALLELEID\\t$coord\"\n            if {$CLNVC eq \"Deletion\"} {\n                lappend L_toWriteLoss \"$toWrite\"\n            } elseif {$CLNVC eq \"Duplication\"} {\n                lappend L_toWriteGain \"$toWrite\"\n            } elseif {$CLNVC eq \"Insertion\"} {\n                lappend L_toWriteIns \"$toWrite\"\n            } elseif {$CLNVC eq \"Inversion\"} {\n                lappend L_toWriteInv \"$toWrite\"\n            }\n            \n        }\n        close $f\n        \n        # Writing:\n        ##########\n        puts \"\\t       ([llength $L_toWriteLoss] SV Loss + [llength $L_toWriteGain] SV Gain + [llength $L_toWriteIns] SV Ins + [llength $L_toWriteInv] SV Inv)\"\n        if {$L_toWriteLoss ne {}} {\n            WriteTextInFile [join $L_toWriteLoss \"\\n\"] $pathogenicLossFile_Tmp\n        }\n        if {$L_toWriteGain ne {}} {\n            WriteTextInFile [join $L_toWriteGain \"\\n\"] $pathogenicGainFile_Tmp\n        }\n        if {$L_toWriteIns ne {}} {\n            WriteTextInFile [join $L_toWriteIns \"\\n\"]  $pathogenicInsFile_Tmp\n        }\n        if {$L_toWriteInv ne {}} {\n            WriteTextInFile [join $L_toWriteInv \"\\n\"]  $pathogenicInvFile_Tmp\n        }\n        \n        # Clean:\n        ########\n        file delete -force $ClinVarFileDownloaded\n    }\n    \n    return\n}\n\n\nproc checkClinGenHITS_pathogenicFile {genomeBuild} {\n    \n    global g_AnnotSV\n    \n    ## Check if ClinGen files have been downloaded\n    ##############################################\n    set pathogenicDir \"$g_AnnotSV(annotationsDir)/Annotations_$g_AnnotSV(organism)/FtIncludedInSV/PathogenicSV/$genomeBuild\"\n    set ClinGenFileDownloaded1 [glob -nocomplain \"$pathogenicDir/ClinGen_gene_curation_list_$genomeBuild.tsv\"]\n    set ClinGenFileDownloaded2 [glob -nocomplain \"$pathogenicDir/ClinGen_region_curation_list_$genomeBuild.tsv\"]\n    \n    if {$ClinGenFileDownloaded1 ne \"\" || $ClinGenFileDownloaded2 ne \"\"} {\n        # We have some ClinGen annotations to add in $pathogenic*File\n        if {[info exists g_AnnotSV(pathogenicText)]} {\n            puts $g_AnnotSV(pathogenicText)\n            unset g_AnnotSV(pathogenicText)\n        }\n        puts \"\\t   >>> ClinGen parsing ([clock format [clock seconds] -format \"%B %d %Y - %H:%M\"])\"\n    } else {return}\n    \n    set L_toWriteLoss {}\n    set L_toWriteGain {}\n    set pathogenicLossFile_Tmp \"$pathogenicDir/pathogenic_Loss_SV_$genomeBuild.tmp.bed\"\n    set pathogenicGainFile_Tmp \"$pathogenicDir/pathogenic_Gain_SV_$genomeBuild.tmp.bed\"\n    \n    ## ClinGenFileDownloaded1 parsing\n    #################################\n    set f [open \"$ClinGenFileDownloaded1\"]\n    while {! [eof $f]} {\n        set L [gets $f]\n        set Ls [split $L \"\\t\"]\n        # Header 1:\n        ###########\n        #Gene Symbol    Gene ID cytoBand        Genomic Location        Haploinsufficiency Score        Haploinsufficiency Description  Haploinsufficiency PMID1        Haploinsufficiency PMID2        Haploinsufficiency PMID3        Haploinsufficiency PMID4        Haploinsufficiency PMID5        Haploinsufficiency PMID6        Triplosensitivity Score Triplosensitivity Description   Triplosensitivity PMID1 Triplosensitivity PMID2 Triplosensitivity PMID3 Triplosensitivity PMID4 Triplosensitivity PMID5 Triplosensitivity PMID6 Date Last Evaluated     Haploinsufficiency Disease ID   Triplosensitivity Disease ID\n        \n        # Selection of the pathogenic variants to keep:\n        ###############################################\n        if {[regexp \"(^#Gene Symbol)|(^#ISCA ID)\" $L]} {\n            set i_id 0 ; #\"Gene Symbol\" (gene) or #\"ISCA ID\" (region)\n            set i_coord [lsearch -exact $Ls \"Genomic Location\"]; if {$i_coord == -1} {puts \"$ClinGenFileDownloaded\"; puts \"Bad header line syntax. \\\"Genomic Location\\\" column not found - Exit with error\"; exit 2}\n            set i_hi [lsearch -exact $Ls \"Haploinsufficiency Score\"]; if {$i_hi == -1} {puts \"$ClinGenFileDownloaded\"; puts \"Bad header line syntax. \\\"Haploinsufficiency Score\\\" column not found - Exit with error\"; exit 2}\n            set i_ts [lsearch -exact $Ls \"Triplosensitivity Score\"]; if {$i_ts == -1} {puts \"$ClinGenFileDownloaded\"; puts \"Bad header line syntax. \\\"Triplosensitivity\\\" Score column not found - Exit with error\"; exit 2}\n            continue\n        }\n        if {[regexp \"^#\" $L]} {continue}\n        \n        set ID [lindex $Ls $i_id]\n        set coord [lindex $Ls $i_coord]\n        regsub -all \"(chr)| \" $coord \"\" coord\n        if { ![regexp \"(\\[0-9XYMT\\]+):(\\[0-9\\]+)-(\\[0-9\\]+)\" $coord match chrom start end] } {continue} ;# In GRCh38, some coordinates = \"tbd\" (to be determined)\n        set hi [lindex $Ls $i_hi]\n        set ts [lindex $Ls $i_ts]\n        set hpo \"\"\n        if {$hi eq \"3\"} {\n            # Phenotype is only available for Gene ID (not for ISCA region)\n            set phenotype [fromOMIMgeneToPhenotype $ID]\n            lappend L_toWriteLoss \"$chrom\\t$start\\t$end\\t$phenotype\\t$hpo\\tHI3:$ID\\t$coord\"\n        }\n        if {$ts eq \"3\"} {\n            set phenotype [fromOMIMgeneToPhenotype $ID]\n            lappend L_toWriteGain \"$chrom\\t$start\\t$end\\t$phenotype\\t$hpo\\tTS3:$ID\\t$coord\"\n        }\n    }\n    close $f\n    \n    \n    ## ClinGenFileDownloaded2 parsing\n    #################################\n    set f [open \"$ClinGenFileDownloaded2\"]\n    while {! [eof $f]} {\n        set L [gets $f]\n        set Ls [split $L \"\\t\"]\n        \n        # Header 2:\n        ###########\n        #ISCA ID        ISCA Region Name        cytoBand        Genomic Location        Haploinsufficiency Score        Haploinsufficiency Description  Haploinsufficiency PMID1        Haploinsufficiency PMID2       Haploinsufficiency PMID3 Haploinsufficiency PMID4        Haploinsufficiency PMID5        Haploinsufficiency PMID6        Triplosensitivity Score Triplosensitivity Description   Triplosensitivity PMID1 Triplosensitivity PMID2 Triplosensitivity PMID3 Triplosensitivity PMID4 Triplosensitivity PMID5 Triplosensitivity PMID6 Date Last Evaluated     Haploinsufficiency Disease ID   Triplosensitivity Disease ID\n        \n        # Selection of the pathogenic variants to keep:\n        ###########################################\n        if {[regexp \"(^#Gene Symbol)|(^#ISCA ID)\" $L]} {\n            set i_id 0 ; #\"Gene Symbol\" (gene) or #\"ISCA ID\" (region)\n            set i_coord [lsearch -exact $Ls \"Genomic Location\"]; if {$i_coord == -1} {puts \"$ClinGenFileDownloaded\"; puts \"Bad header line syntax. \\\"Genomic Location\\\" column not found - Exit with error\"; exit 2}\n            set i_hi [lsearch -exact $Ls \"Haploinsufficiency Score\"]; if {$i_hi == -1} {puts \"$ClinGenFileDownloaded\"; puts \"Bad header line syntax. \\\"Haploinsufficiency Score\\\" column not found - Exit with error\"; exit 2}\n            set i_ts [lsearch -exact $Ls \"Triplosensitivity Score\"]; if {$i_ts == -1} {puts \"$ClinGenFileDownloaded\"; puts \"Bad header line syntax. \\\"Triplosensitivity\\\" Score column not found - Exit with error\"; exit 2}\n            set i_isca [lsearch -exact $Ls \"ISCA Region Name\"]; if {$i_isca == -1} {puts \"$ClinGenFileDownloaded\"; puts \"Bad header line syntax. \\\"ISCA Region Name\\\" column not found - Exit with error\"; exit 2}\n            continue\n        }\n        if {[regexp \"^#\" $L]} {continue}\n        \n        set ID [lindex $Ls $i_id]\n        set coord [lindex $Ls $i_coord]\n        regsub -all \"(chr)| \" $coord \"\" coord\n        if { ![regexp \"(\\[0-9XYMT\\]+):(\\[0-9\\]+)-(\\[0-9\\]+)\" $coord match chrom start end] } {continue} ;# In GRCh38, some coordinates = \"tbd\" (to be determined)\n        set hi [lindex $Ls $i_hi]\n        set ts [lindex $Ls $i_ts]\n        set iscaRegionName [lindex $Ls $i_isca]\n        set hpo \"\"\n        if {$hi eq \"3\"} {\n            # Phenotype is only available for Gene ID (not for ISCA region)\n            set phenotype \"$iscaRegionName\"\n            lappend L_toWriteLoss \"$chrom\\t$start\\t$end\\t$phenotype\\t$hpo\\tHI3:$ID\\t$coord\"\n        }\n        if {$ts eq \"3\"} {\n            set phenotype \"$iscaRegionName\"\n            lappend L_toWriteGain \"$chrom\\t$start\\t$end\\t$phenotype\\t$hpo\\tTS3:$ID\\t$coord\"\n        }\n    }\n    close $f\n    \n    \n    # Writing:\n    ##########\n    puts \"\\t       ([llength $L_toWriteLoss] SV Loss + [llength $L_toWriteGain] SV Gain)\"\n    if {$L_toWriteLoss ne {}} {\n        WriteTextInFile [join $L_toWriteLoss \"\\n\"] $pathogenicLossFile_Tmp\n    }\n    if {$L_toWriteGain ne {}} {\n        WriteTextInFile [join $L_toWriteGain \"\\n\"] $pathogenicGainFile_Tmp\n    }\n    \n    # Clean:\n    ########\n    file delete -force $ClinGenFileDownloaded1\n    file delete -force $ClinGenFileDownloaded2\n    \n    return\n}\n\n\nproc checkdbVar_PathogenicFile {genomeBuild} {\n    \n    global g_AnnotSV\n    \n    ## Check if dbVar files have been downloaded\n    ############################€###############\n    set pathogenicDir \"$g_AnnotSV(annotationsDir)/Annotations_$g_AnnotSV(organism)/FtIncludedInSV/PathogenicSV/$genomeBuild\"\n    set dbVarFileDownloaded1 [glob -nocomplain \"$pathogenicDir/$genomeBuild.nr_deletions.pathogenic.tsv.gz\"]    ; # Loss\n    set dbVarFileDownloaded2 [glob -nocomplain \"$pathogenicDir/$genomeBuild.nr_duplications.pathogenic.tsv.gz\"] ; # Gain\n    set dbVarFileDownloaded3 [glob -nocomplain \"$pathogenicDir/$genomeBuild.nr_insertions.pathogenic.tsv.gz\"]   ; # Ins\n    \n    if {$dbVarFileDownloaded1 ne \"\" || $dbVarFileDownloaded2 ne \"\" || $dbVarFileDownloaded3 ne \"\"} {\n        # We have some dbVar annotations to add in $pathogenic*File\n        if {[info exists g_AnnotSV(pathogenicText)]} {\n            puts $g_AnnotSV(pathogenicText)\n            unset g_AnnotSV(pathogenicText)\n        }\n        puts \"\\t   >>> dbVar parsing ([clock format [clock seconds] -format \"%B %d %Y - %H:%M\"])\"\n    } else {return}\n    \n    set L_files \"$dbVarFileDownloaded1\"\n    lappend L_files \"$dbVarFileDownloaded2\"\n    lappend L_files \"$dbVarFileDownloaded3\"\n    \n    set L_toWriteLoss {}\n    set L_toWriteGain {}\n    set L_toWriteIns {}\n    set pathogenicLossFile_Tmp \"$pathogenicDir/pathogenic_Loss_SV_$genomeBuild.tmp.bed\"\n    set pathogenicGainFile_Tmp \"$pathogenicDir/pathogenic_Gain_SV_$genomeBuild.tmp.bed\"\n    set pathogenicInsFile_Tmp \"$pathogenicDir/pathogenic_Ins_SV_$genomeBuild.tmp.bed\"\n    \n    foreach dbVarFileDownloaded \"$L_files\" {\n        \n        if {[regexp \"deletions\" $dbVarFileDownloaded]} {\n            set svtype \"Loss\"\n        } elseif {[regexp \"duplications\" $dbVarFileDownloaded]} {\n            set svtype \"Gain\"\n        } elseif {[regexp \"insertions\" $dbVarFileDownloaded]} {\n            set svtype \"Ins\"\n        }\n        \n        if {$dbVarFileDownloaded ne \"\"} {\n            set f [open \"| gzip -cd $dbVarFileDownloaded\"]\n            while {! [eof $f]} {\n                set L [gets $f]\n                set Ls [split $L \"\\t\"]\n                # Header 1 and 2:\n                #################\n                # #chr    outermost_start outermost_stop  variant_count   variant_type    method  analysis        platform        study   variant clinical_assertion      clinvar_accession       bin_size\n                \n                # Selection of the pathogenic variants to keep:\n                ###############################################\n                if {[regexp \"^#chr\" $L]} {\n                    set i_chr 0\n                    set i_start [lsearch -exact $Ls \"outermost_start\"]; if {$i_start == -1} {puts \"$dbVarFileDownloaded\"; puts \"Bad header line syntax. outermost_start column not found - Exit with error\"; exit 2}\n                    set i_stop [lsearch -exact $Ls \"outermost_stop\"]; if {$i_stop == -1} {puts \"$dbVarFileDownloaded\"; puts \"Bad header line syntax. outermost_stop column not found - Exit with error\"; exit 2}\n                    set i_source [lsearch -exact $Ls \"variant\"]; if {$i_source == -1} {puts \"$dbVarFileDownloaded\"; puts \"Bad header line syntax. variant column not found - Exit with error\"; exit 2}\n                    \n                    continue\n                }\n                if {[string index $L 0] eq \"#\" || $L eq \"\"} {continue}\n                set chrom [lindex $Ls $i_chr]\n                set start [lindex $Ls $i_start]\n                set end [lindex $Ls $i_stop]\n                set Source [lindex $Ls $i_source]\n                set coord \"$chrom:${start}-$end\"\n                set phenotype \"\"\n                set hpo \"\"\n                \n                lappend L_toWrite$svtype \"$chrom\\t$start\\t$end\\t$phenotype\\t$hpo\\tdbVar:$Source\\t$coord\"\n            }\n            close $f\n        }\n    }\n    \n    # Writing:\n    ##########\n    puts \"\\t       ([llength $L_toWriteLoss] SV Loss + [llength $L_toWriteGain] SV Gain + [llength $L_toWriteIns] SV Ins)\"\n    if {$L_toWriteLoss ne {}} {\n        WriteTextInFile [join $L_toWriteLoss \"\\n\"] $pathogenicLossFile_Tmp\n    }\n    if {$L_toWriteGain ne {}} {\n        WriteTextInFile [join $L_toWriteGain \"\\n\"] $pathogenicGainFile_Tmp\n    }\n    if {$L_toWriteIns ne {}} {\n        WriteTextInFile [join $L_toWriteIns \"\\n\"] $pathogenicInsFile_Tmp\n    }\n    \n    # Clean:\n    ########\n    file delete -force $dbVarFileDownloaded1\n    file delete -force $dbVarFileDownloaded2\n    file delete -force $dbVarFileDownloaded3\n    \n    return\n}\n\n\nproc checkOMIM_PathogenicFile {genomeBuild} {\n    \n    global g_AnnotSV\n    \n    ## Check if OMIM file has been downloaded\n    #########################################\n    set pathogenicDir \"$g_AnnotSV(annotationsDir)/Annotations_$g_AnnotSV(organism)/FtIncludedInSV/PathogenicSV/$genomeBuild\"\n    set OMIMfileDownloaded [glob -nocomplain \"$pathogenicDir/*_morbid.tsv.gz\"]\n    \n    \n    if {$OMIMfileDownloaded ne \"\"} {\n        # We have some OMIM annotations to add in $pathogenicLossFile\n        if {[info exists g_AnnotSV(pathogenicText)]} {\n            puts $g_AnnotSV(pathogenicText)\n            unset g_AnnotSV(pathogenicText)\n        }\n        puts \"\\t   >>> OMIM morbid genes parsing ([clock format [clock seconds] -format \"%B %d %Y - %H:%M\"])\"\n        \n        # Genes coordinates\n        set genesDir \"$g_AnnotSV(annotationsDir)/Annotations_$g_AnnotSV(organism)/Genes/$genomeBuild\"\n        set genesFileFormatted \"[glob -nocomplain $genesDir/genes.$g_AnnotSV(tx).sorted.bed]\"\n        foreach L [LinesFromFile $genesFileFormatted] {\n            set Ls [split $L \"\\t\"]\n            set geneName [lindex $Ls 4]\n            set chrom($geneName) [lindex $Ls 0]\n            set start($geneName) [lindex $Ls 1]\n            set end($geneName)   [lindex $Ls 2]\n        }\n        \n        # Morbid genes\n        set L_toWriteLoss {}\n        set f [open \"| gzip -cd $OMIMfileDownloaded\"]\n        set L_HPO \"\"\n        while {! [eof $f]} {\n            set L [gets $f]\n            set g [lindex $L 0]\n            if {$g eq \"\"} {continue}\n            set pheno [fromOMIMgeneToPhenotype $g]\n            if {[info exists chrom($g)]} {\n                set coord \"$chrom($g):$start($g)\"\n                append coord \"-$end($g)\"\n                regsub -all \"{|}\" $pheno \"\" pheno\n                set toWrite \"$chrom($g)\\t$start($g)\\t$end($g)\\t$pheno\\t$L_HPO\\tmorbid:$g\\t$coord\"\n                lappend L_toWriteLoss \"$toWrite\"\n            }\n        }\n        close $f\n        \n        # Writing:\n        ##########\n        puts \"\\t       ([llength $L_toWriteLoss] SV Loss)\"\n        set pathogenicLossFile_Tmp \"$pathogenicDir/pathogenic_Loss_SV_$genomeBuild.tmp.bed\"\n        if {$L_toWriteLoss ne {}} {\n            WriteTextInFile [join $L_toWriteLoss \"\\n\"] $pathogenicLossFile_Tmp\n        }\n        \n        # Clean:\n        ########\n        file delete -force $OMIMfileDownloaded\n    }\n    \n    \n    return\n}\n\n\n\n\n# Return the overlapped SV annotation\nproc pathogenicSVannotation {SVchrom SVstart SVend} {\n    \n    global g_AnnotSV\n    global pathogenicText\n    \n    set pathogenicDir \"$g_AnnotSV(annotationsDir)/Annotations_$g_AnnotSV(organism)/FtIncludedInSV/PathogenicSV/$g_AnnotSV(genomeBuild)\"\n    \n    if {![info exists pathogenicText(DONE)]} {\n        # headerOutput:         P_gain_phen  P_gain_hpo  P_gain_source  P_gain_coord\n        #                       P_loss_phen  P_loss_hpo  P_loss_source  P_loss_coord\n        # + (if user selected): P_ins_phen   P_ins_hpo   P_ins_source   P_ins_coord\n        #                       P_inv_phen   P_inv_hpo   P_inv_source   P_inv_coord\n        \n        set L_pathogenicText(Empty) {}\n        foreach svtype {\"gain\" \"loss\" \"ins\" \"inv\"} {\n            # Keep only the user requested columns (defined in the configfile)\n            if {[lsearch -regexp \"$g_AnnotSV(outputColHeader)\" \"^P_${svtype}_\"] eq -1} { continue }\n            lappend L_pathogenicText(Empty) {*}{\"\" \"\" \"\" \"\"}\n        }\n        set pathogenicText(Empty) \"[join $L_pathogenicText(Empty) \"\\t\"]\"\n        \n        foreach svtype {\"Gain\" \"Loss\" \"Ins\" \"Inv\"} {\n            \n            # Keep only the user requested columns (defined in the configfile)\n            if {[lsearch -regexp \"$g_AnnotSV(outputColHeader)\" \"^P_[string tolower ${svtype}]_\"] eq -1} { continue }\n            \n            # Intersect\n            set pathogenicBEDfile [glob -nocomplain \"$pathogenicDir/pathogenic_${svtype}_SV_$g_AnnotSV(genomeBuild).sorted.bed\"]\n            regsub -nocase \"(.formatted)?.bed$\" $g_AnnotSV(bedFile) \".intersect.pathogenic-$svtype\" tmpFile\n            set tmpFile \"$g_AnnotSV(outputDir)/[file tail $tmpFile]\"\n            file delete -force $tmpFile\n            # -f 1.0 : the feature in B overlaps at least 100% of the A feature.\n            if {[catch {exec $g_AnnotSV(bedtools) intersect -sorted -a $pathogenicBEDfile -b $g_AnnotSV(fullAndSplitBedFile) -f 1.0 -wa -wb > $tmpFile} Message]} {\n                if {[catch {exec $g_AnnotSV(bedtools) intersect -a $pathogenicBEDfile -b $g_AnnotSV(fullAndSplitBedFile) -f 1.0 -wa -wb > $tmpFile} Message]} {\n                    puts \"-- pathogenicSVAnnotation, $svtype --\"\n                    puts \"$g_AnnotSV(bedtools) intersect -sorted -a $pathogenicBEDfile -b $g_AnnotSV(fullAndSplitBedFile) -f 1.0 -wa -wb > $tmpFile\"\n                    puts \"$Message\"\n                    puts \"Exit with error\"\n                    exit 2\n                }\n            }\n            # Parse\n            set f [open $tmpFile]\n            while {![eof $f]} {\n                set L [gets $f]\n                if {$L eq \"\"} {continue}\n                set Ls [split $L \"\\t\"]\n                \n                set pathogenic_phen [lindex $Ls 3]\n                set pathogenic_hpo [lindex $Ls 4]\n                set pathogenic_source [lindex $Ls 5]\n                set pathogenic_coord [lindex $Ls 6]\n                \n                set SVtoAnn_chrom [lindex $Ls 7]\n                set SVtoAnn_start [lindex $Ls 8]\n                set SVtoAnn_end   [lindex $Ls 9]\n                \n                set SVtoAnn \"$SVtoAnn_chrom,$SVtoAnn_start,$SVtoAnn_end\"\n                lappend L_allSVtoAnn $SVtoAnn\n                if {$pathogenic_phen ne \"\"} {\n                    lappend L_pathogenic_phen($SVtoAnn,$svtype) $pathogenic_phen\n                }\n                if {$pathogenic_hpo ne \"\"} {\n                    lappend L_pathogenic_hpo($SVtoAnn,$svtype) {*}[split $pathogenic_hpo \" \"]\n                }\n                lappend L_pathogenic_source($SVtoAnn,$svtype) $pathogenic_source\n                lappend L_pathogenic_coord($SVtoAnn,$svtype) $pathogenic_coord\n            }\n            file delete -force $tmpFile\n        }\n        \n        # Loading pathogenic final annotation for each SV\n        if {[info exists L_allSVtoAnn]} {\n            foreach SVtoAnn [lsort -unique $L_allSVtoAnn] {\n                \n                foreach svtype {\"Gain\" \"Loss\" \"Ins\" \"Inv\"} {\n                    \n                    # Keep only the user requested columns (defined in the configfile)\n                    if {[lsearch -regexp \"$g_AnnotSV(outputColHeader)\" \"^P_[string tolower ${svtype}]_\"] eq -1} { continue }\n                    \n                    if {[info exists L_pathogenic_coord($SVtoAnn,$svtype)]} {\n                        if {[info exists L_pathogenic_phen($SVtoAnn,$svtype)]} {\n                            lappend L_pathogenicText($SVtoAnn) \"[join [lsort -unique $L_pathogenic_phen($SVtoAnn,$svtype)] \";\"]\"\n                        } else {\n                            lappend L_pathogenicText($SVtoAnn) \"\"\n                        }\n                        if {[info exists L_pathogenic_hpo($SVtoAnn,$svtype)]} {\n                            lappend L_pathogenicText($SVtoAnn) \"[join [lsort -unique $L_pathogenic_hpo($SVtoAnn,$svtype)] \";\"]\"\n                        } else {\n                            lappend L_pathogenicText($SVtoAnn) \"\"\n                        }\n                        lappend L_pathogenicText($SVtoAnn) \"[join [lsort -unique $L_pathogenic_source($SVtoAnn,$svtype)] \";\"]\"\n                        lappend L_pathogenicText($SVtoAnn) \"[join [lsort -unique $L_pathogenic_coord($SVtoAnn,$svtype)] \";\"]\"\n                    } else {\n                        lappend L_pathogenicText($SVtoAnn) {*}{\"\" \"\" \"\" \"\"}\n                    }\n                }\n                set pathogenicText($SVtoAnn) [join $L_pathogenicText($SVtoAnn) \"\\t\"]\n            }\n        }\n        set pathogenicText(DONE) 1\n    }\n    \n    if {[info exist pathogenicText($SVchrom,$SVstart,$SVend)]} {\n        return $pathogenicText($SVchrom,$SVstart,$SVend)\n    } else {\n        return $pathogenicText(Empty)\n    }\n}\n\n\n\n\n# Return the PARTIALLY overlapped (po) SV annotation\nproc poPathogenicSVannotation {SVchrom SVstart SVend} {\n    \n    global g_AnnotSV\n    global poPathogenicText\n    \n    set pathogenicDir \"$g_AnnotSV(annotationsDir)/Annotations_$g_AnnotSV(organism)/FtIncludedInSV/PathogenicSV/$g_AnnotSV(genomeBuild)\"\n    \n    if {![info exists poPathogenicText(DONE)]} {\n        # headerOutput:         po_P_gain_phen  po_P_gain_hpo  po_P_gain_source  po_P_gain_coord  po_P_gain_percent\n        #                       po_P_loss_phen  po_P_loss_hpo  po_P_loss_source  po_P_loss_coord  po_P_loss_percent\n        \n        set L_poPathogenicText(Empty) {}\n        foreach svtype {\"gain\" \"loss\"} {\n            # Keep only the user requested columns (defined in the configfile)\n            if {[lsearch -regexp \"$g_AnnotSV(outputColHeader)\" \"^po_P_${svtype}_\"] eq -1} { continue }\n            lappend L_poPathogenicText(Empty) {*}{\"\" \"\" \"\" \"\" \"\"}\n        }\n        set poPathogenicText(Empty) \"[join $L_poPathogenicText(Empty) \"\\t\"]\"\n        \n        foreach svtype {\"Gain\" \"Loss\"} {\n            \n            # Keep only the user requested columns (defined in the configfile)\n            if {[lsearch -regexp \"$g_AnnotSV(outputColHeader)\" \"^po_P_[string tolower ${svtype}]_\"] eq -1} { continue }\n            \n            # Intersect\n            # Header:\n            #   chrom  start  end  phenotype  hpo  id  coord\n            set pathogenicBEDfile [glob -nocomplain \"$pathogenicDir/pathogenic_${svtype}_SV_$g_AnnotSV(genomeBuild).sorted.bed\"]\n            regsub -nocase \"(.formatted)?.bed$\" $g_AnnotSV(bedFile) \".intersect.po_pathogenic-$svtype\" tmpFile\n            set tmpFile \"$g_AnnotSV(outputDir)/[file tail $tmpFile]\"\n            file delete -force $tmpFile\n            # Any overlap\n            if {[catch {exec $g_AnnotSV(bedtools) intersect -sorted -a $pathogenicBEDfile -b $g_AnnotSV(fullAndSplitBedFile) -wa -wb > $tmpFile} Message]} {\n                if {[catch {exec $g_AnnotSV(bedtools) intersect -a $pathogenicBEDfile -b $g_AnnotSV(fullAndSplitBedFile) -wa -wb > $tmpFile} Message]} {\n                    puts \"-- poPathogenicSVAnnotation, $svtype --\"\n                    puts \"$g_AnnotSV(bedtools) intersect -sorted -a $pathogenicBEDfile -b $g_AnnotSV(fullAndSplitBedFile) -wa -wb > $tmpFile\"\n                    puts \"$Message\"\n                    puts \"Exit with error\"\n                    exit 2\n                }\n            }\n            # Parse\n            set f [open $tmpFile]\n            while {![eof $f]} {\n                set L [gets $f]\n                if {$L eq \"\"} {continue}\n                set Ls [split $L \"\\t\"]\n                \n                set po_pathogenic_phen [lindex $Ls 3]\n                set po_pathogenic_hpo [lindex $Ls 4]\n                set po_pathogenic_source [lindex $Ls 5]\n                set po_pathogenic_coord [lindex $Ls 6]\n                \n                set SVtoAnn_chrom [lindex $Ls 7]\n                set SVtoAnn_start [lindex $Ls 8]\n                set SVtoAnn_end   [lindex $Ls 9]\n                \n                if {[regexp \"\\[0-9\\]+:(\\[0-9\\]+)-(\\[0-9\\]+)\" $po_pathogenic_coord match startP endP]} {\n                    # Keep only the pathogenic SV > $g_AnnotSV(SVminSize) (50 by default)\n                    # WARNING: some dbVar SV have the same start and end locations (e.g. dbVar:nssv17171884)\n                    if {[expr {$endP-$startP}] < $g_AnnotSV(SVminSize)} {continue}\n                    \n                    if {$SVtoAnn_end > $endP} {set po_end $endP} else {set po_end $SVtoAnn_end}\n                    if {$SVtoAnn_start > $startP} {set po_start $SVtoAnn_start} else {set po_start $startP}\n                    # Some pathogenic variant from dbvar (e.g. nssv17172411) are described with \"$endP = $startP\" (region size = 1)\n                    set length_endP_startP [expr {($endP-$startP)}]\n                    if {$length_endP_startP eq 0} {set length_endP_startP 1}\n                    set percent [format \"%.2f\" [expr {($po_end-$po_start)*100.0/$length_endP_startP}]]\n                    \n                    if {$percent == 100} {continue}\n                    \n                    set SVtoAnn \"$SVtoAnn_chrom,$SVtoAnn_start,$SVtoAnn_end\"\n                    lappend L_allSVtoAnn $SVtoAnn\n                    if {$po_pathogenic_phen ne \"\"} {\n                        lappend L_po_pathogenic_phen($SVtoAnn,$svtype) $po_pathogenic_phen\n                    }\n                    if {$po_pathogenic_hpo ne \"\"} {\n                        lappend L_po_pathogenic_hpo($SVtoAnn,$svtype) {*}[split $po_pathogenic_hpo \" \"]\n                    }\n                    lappend L_po_pathogenic_source($SVtoAnn,$svtype) $po_pathogenic_source\n                    lappend L_po_pathogenic_coord($SVtoAnn,$svtype) $po_pathogenic_coord\n                    lappend L_po_pathogenic_percent($SVtoAnn,$svtype) $percent\n                }\n            }\n            file delete -force $tmpFile\n        }\n        \n        # Loading pathogenic final annotation for each SV\n        if {[info exists L_allSVtoAnn]} {\n            foreach SVtoAnn [lsort -unique $L_allSVtoAnn] {\n                \n                foreach svtype {\"Gain\" \"Loss\"} {\n                    \n                    # Keep only the user requested columns (defined in the configfile)\n                    if {[lsearch -regexp \"$g_AnnotSV(outputColHeader)\" \"^P_[string tolower ${svtype}]_\"] eq -1} { continue }\n                    \n                    if {[info exists L_po_pathogenic_coord($SVtoAnn,$svtype)]} {\n                        if {[info exists L_po_pathogenic_phen($SVtoAnn,$svtype)]} {\n                            lappend L_poPathogenicText($SVtoAnn) \"[join [lsort -unique $L_po_pathogenic_phen($SVtoAnn,$svtype)] \";\"]\"\n                        } else {\n                            lappend L_poPathogenicText($SVtoAnn) \"\"\n                        }\n                        if {[info exists L_poPathogenic_hpo($SVtoAnn,$svtype)]} {\n                            lappend L_poPathogenicText($SVtoAnn) \"[join [lsort -unique $L_po_pathogenic_hpo($SVtoAnn,$svtype)] \";\"]\"\n                        } else {\n                            lappend L_poPathogenicText($SVtoAnn) \"\"\n                        }\n                        # No use of a \"lsort -unique\" command below, to keep the correspondance between the 3 following features:\n                        lappend L_poPathogenicText($SVtoAnn) \"[join $L_po_pathogenic_source($SVtoAnn,$svtype) \";\"]\"\n                        lappend L_poPathogenicText($SVtoAnn) \"[join $L_po_pathogenic_coord($SVtoAnn,$svtype) \";\"]\"\n                        lappend L_poPathogenicText($SVtoAnn) \"[join $L_po_pathogenic_percent($SVtoAnn,$svtype) \";\"]\"\n                    } else {\n                        lappend L_poPathogenicText($SVtoAnn) {*}{\"\" \"\" \"\" \"\" \"\"}\n                    }\n                }\n                set poPathogenicText($SVtoAnn) [join $L_poPathogenicText($SVtoAnn) \"\\t\"]\n            }\n        }\n        set poPathogenicText(DONE) 1\n    }\n    if {[info exist poPathogenicText($SVchrom,$SVstart,$SVend)]} {\n        return $poPathogenicText($SVchrom,$SVstart,$SVend)\n    } else {\n        return $poPathogenicText(Empty)\n    }\n}\n\n"
  },
  {
    "path": "share/tcl/AnnotSV/AnnotSV-phenogenius.tcl",
    "content": "############################################################################################################\n# AnnotSV 3.5.8                                                                                            #\n#                                                                                                          #\n# AnnotSV: An integrated tool for Structural Variations annotation and ranking                             #\n#                                                                                                          #\n# Copyright (C) 2017-present Veronique Geoffroy (veronique.geoffroy@inserm.fr)                             #\n#                                                                                                          #\n# This is part of AnnotSV source code.                                                                     #\n#                                                                                                          #\n# This program is free software; you can redistribute it and/or                                            #\n# modify it under the terms of the GNU General Public License                                              #\n# as published by the Free Software Foundation; either version 3                                           #\n# of the License, or (at your option) any later version.                                                   #\n#                                                                                                          #\n# This program is distributed in the hope that it will be useful,                                          #\n# but WITHOUT ANY WARRANTY; without even the implied warranty of                                           #\n# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the                                            #\n# GNU General Public License for more details.                                                             #\n#                                                                                                          #\n# You should have received a copy of the GNU General Public License                                        #\n# along with this program; If not, see <http://www.gnu.org/licenses/>.                                     #\n############################################################################################################\n\n\n\n## - Check if the PhenoGeniusCli installation is ok\n##   Install of PhenoGeniusCli is done here (if needed)\nproc checkPhenoGeniusCli {} {\n    \n    global g_AnnotSV\n    \n    if {$g_AnnotSV(hpo) eq \"\"} {\n        set g_AnnotSV(PhenoGeniusCli) \"0\" ;# No HPO terms in INPUT\n        return\n    }\n    set checkResult [catch {exec $g_AnnotSV(bashDir)/checkPhenoGeniusCliInstall.sh} Message]\n    if {$checkResult eq 0} {\n        puts \"\\tINFO: AnnotSV takes use of PhenoGenius (Yauy et al., 2023) for the phenotype-driven analysis.\"\n        set g_AnnotSV(PhenoGeniusCli) \"1\"\n    } else {\n        puts \"\\nWARNING: No PhenoGenius installation available for the phenotype-driven analysis.\"\n        puts \"\\ncf $g_AnnotSV(installDir)/share/python3/phenogeniuscli/*.log\\n\"\n        set g_AnnotSV(PhenoGeniusCli) \"0\"\n    }\n    \n    return\n}\n\n\n\n# Creation of the g_PhenoGeniusCli variable:\n# g_PhenoGeniusCli($geneName) = PhenoGeniusCli_score\\tPhenoGeniusCli_phenotype\\tPhenoGeniusCli_specificity\n# g_PhenoGeniusCli($NCBIid) = PhenoGeniusCli_score\\tPhenoGeniusCli_phenotype\\tPhenoGeniusCli_specificity\n# default = \"-1.0\\t\\t\"\n#\n# INPUTS:\n# L_NCBI_ID\n# L_genes\n# L_HPO:   e.g. \"HP:0001156,HP:0001363,HP:0011304,HP:0010055\"\n#\n# INFO: This proc is run from \"AnnotSV-regulatoryelements.tcl\"\nproc runPhenoGeniusCli {L_Genes L_NCBI_ID L_HPO} {\n    \n    global g_AnnotSV\n    global g_PhenoGeniusCli\n    \n    puts \"...running PhenoGeniusCli for [llength $L_Genes] gene names ([clock format [clock seconds] -format \"%B %d %Y - %H:%M\"])\\n\"\n    \n    set tmpCommandFile \"$g_AnnotSV(outputDir)/[clock format [clock seconds] -format \"%Y%m%d-%H%M%S\"]_[pid]_run_phenogeniuscli.tmp.bash\"\n    set tmpResultsFile \"$g_AnnotSV(outputDir)/[clock format [clock seconds] -format \"%Y%m%d-%H%M%S\"]_[pid]_phenogeniuscli_results.tmp.tsv\"\n    set tmpResultsLogFile \"$g_AnnotSV(outputDir)/[clock format [clock seconds] -format \"%Y%m%d-%H%M%S\"]_[pid]_phenogeniuscli_results.tmp.log\"\n    \n    set codeToWrite \"#!/bin/bash\\n\\n\"\n    append codeToWrite \"cd $g_AnnotSV(installDir)/share/python3/phenogeniuscli/PhenoGeniusCli\\n\"\n    append codeToWrite \"poetry install\\n\"\n    append codeToWrite \"poetry run python3 phenogenius_cli.py --hpo_list $L_HPO --result_file $tmpResultsFile &> $tmpResultsLogFile \\n\"\n    \n    WriteTextInFile \"$codeToWrite\" $tmpCommandFile\n    file attributes $tmpCommandFile -permissions 0755\n    \n    if {[catch {exec $tmpCommandFile} Message] && [regexp -nocase \"error\" $Message]} {\n        puts \"$codeToWrite\\n\"\n        puts $Message\n    }\n    \n    if {![file exists $tmpResultsLogFile]} {set g_AnnotSV(PhenoGeniusCli) \"0\"; return}\n    \n    foreach L [LinesFromFile $tmpResultsFile] {\n        set Ls [split $L \"\\t\"]\n        # Header\n        # gene_id gene_symbol     rank    score   hpo_implicated  hpo_description_implicated      phenotype_specificity\n        if {[regexp \"^#gene_id\" $L]} {\n            set i_ncbi_id \"0\"\n            set i_gene [lsearch -exact $Ls \"gene_symbol\"]\n            set i_score [lsearch -exact $Ls \"score\"]\n            set i_phenotype [lsearch -exact $Ls \"hpo_description_implicated\"]\n            set i_specificity [lsearch -exact $Ls \"phenotype_specificity\"]\n            continue\n        }\n        # Line example:\n        # 5310    PKD1    1       3.2    [{'HP:0000108': 0.7}, {'HP:0005562': 0.5}]    [{'Renal corticomedullary cysts': 0.7}, {'Multiple renal cysts': 0.5}]    A - the reported phenotype is highly specific and relatively unique to the gene (top 40, 50 perc of diagnosis in PhenoGenius cohort).\n        set NCBI_ID [lindex $Ls $i_ncbi_id]\n        set gene [lindex $Ls $i_gene]\n        set score [lindex $Ls $i_score]\n        regsub -all \"': \\[0-9\\]\\\\\\.\\[0-9\\]\" [lindex $Ls $i_phenotype] \"\" phenotype\n        regsub -all \"\\[\\\\\\[\\\\\\]{}'\\]\" $phenotype \"\" phenotype\n        set specificity [string index [lindex $Ls $i_specificity] 0] ;# A, B, C or D\n        if {[lsearch -exact $L_Genes $gene] ne -1} {\n            set g_PhenoGeniusCli($gene) \"$score\\t$phenotype\\t$specificity\"\n        }\n        if {[lsearch -exact $L_NCBI_ID $NCBI_ID] ne -1} {\n            set g_PhenoGeniusCli($NCBI_ID) \"$score\\t$phenotype\\t$specificity\"\n        }\n    }\n    \n    file delete -force $tmpCommandFile\n    file delete -force $tmpResultsFile\n    file delete -force $tmpResultsLogFile\n    \n    return \"\"\n}\n\n\n# g_PhenoGeniusCli($geneName) = PhenoGeniusCli_score\\tPhenoGeniusCli_phenotype\\tPhenoGeniusCli_specificity\n# g_PhenoGeniusCli($NCBIid) = PhenoGeniusCli_score\\tPhenoGeniusCli_phenotype\\tPhenoGeniusCli_specificity\n# Return either only the specificity or all the annotation:\n# what = \"specificity\" or \"all\"\nproc PhenoGeniusCliAnnotation {GeneName what} {\n    \n    global g_PhenoGeniusCli\n    \n    if {$what eq \"all\"} {\n        # Return all the annotation (PhenoGeniusCli_score\\tPhenoGeniusCli_phenotype\\tPhenoGeniusCli_specificity) => for gene annotations\n        if {[info exists g_PhenoGeniusCli($GeneName)]} {\n            return $g_PhenoGeniusCli($GeneName)\n        } else {\n            set NCBI_ID [searchforNCBIGeneID $GeneName]\n            if {[info exists g_PhenoGeniusCli($NCBI_ID)]} {\n                return $g_PhenoGeniusCli($NCBI_ID)\n            } else {\n                return \"-1.0\\t\\t\"\n            }\n        }\n    } elseif {$what eq \"specificity\"} {\n        # Return only the specificity (PhenoGeniusCli_specificity) => for regulatory elements annotations\n        if {[info exists g_PhenoGeniusCli($GeneName)]} {\n            return [lindex [split $g_PhenoGeniusCli($GeneName) \"\\t\"] end]\n        } else {\n            set NCBI_ID [searchforNCBIGeneID $GeneName]\n            if {[info exists g_PhenoGeniusCli($NCBI_ID)]} {\n                return [lindex [split $g_PhenoGeniusCli($NCBI_ID) \"\\t\"] end]\n            } else {\n                return \"\"\n            }\n        }\n    } else {\n        puts \"proc PhenoGeniusCliAnnotation: Bad option value for \\\"what\\\" ($what)\"\n    }\n}\n\n"
  },
  {
    "path": "share/tcl/AnnotSV/AnnotSV-ranking.tcl",
    "content": "############################################################################################################\n# AnnotSV 3.5.8                                                                                            #\n#                                                                                                          #\n# AnnotSV: An integrated tool for Structural Variations annotation and ranking                             #\n#                                                                                                          #\n# Copyright (C) 2017-present Veronique Geoffroy (veronique.geoffroy@inserm.fr)                             #\n#                                                                                                          #\n# This is part of AnnotSV source code.                                                                     #\n#                                                                                                          #\n# This program is free software; you can redistribute it and/or                                            #\n# modify it under the terms of the GNU General Public License                                              #\n# as published by the Free Software Foundation; either version 3                                           #\n# of the License, or (at your option) any later version.                                                   #\n#                                                                                                          #\n# This program is distributed in the hope that it will be useful,                                          #\n# but WITHOUT ANY WARRANTY; without even the implied warranty of                                           #\n# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the                                            #\n# GNU General Public License for more details.                                                             #\n#                                                                                                          #\n# You should have received a copy of the GNU General Public License                                        #\n# along with this program; If not, see <http://www.gnu.org/licenses/>.                                     #\n############################################################################################################\n\nproc warningRankingMessage {L_header field} {\n    global g_AnnotSV\n    \n    if {$g_AnnotSV(organism) eq \"Human\"} {\n        puts \"WARNING: \\\"$field\\\" annotation is missing:\"\n        puts \"******************************************\"\n        puts \"$L_header\"\n        puts \"******************************************\"\n        puts \"         => No ranking provided\\n\"\n    }\n    return\n}\n\n\n\n## Define the position of some columns in an AnnotSV output line (columns requested for the ranking)\nproc SVprepareRanking {L_header} {\n    \n    global g_AnnotSV\n    global g_i\n    \n    \n    # Check if we have all the needed information for ranking\n    # Before this checking, ranking can not be done\n    set g_AnnotSV(ranking) 0\n    set Ls [split $L_header \"\\t\"]\n    \n    # The user is using a VCF SV input file: the svtTSVcol (\"SV_type\") is necessarily the 6th in the corresponding output annotated file.tsv\n    if {[regexp -nocase \".vcf$|.vcf.gz$\" $g_AnnotSV(SVinputFile)]} {\n        set g_AnnotSV(svtTSVcol) 5\n        set g_AnnotSV(svtBEDcol) 3\n    }\n    \n    # \"SV_type\" is compulsory for the ranking\n    if {$g_AnnotSV(svtTSVcol) eq -1} {warningRankingMessage $L_header \"SV_type\"; return}\n    \n    # Check if we have all the needed information for ranking\n    # unset g_i <=> no SV ranking\n    set g_i(gene)     [lsearch -regexp $Ls \"Gene_name\"];      if {$g_i(gene) == -1} {unset g_i; warningRankingMessage $L_header \"Gene_name\"; return}\n    set g_i(NbGenes)  [lsearch -regexp $Ls \"Gene_count\"]; if {$g_i(NbGenes) == -1} {unset g_i; warningRankingMessage $L_header \"Gene_count\"; return}\n    set g_i(full)     [lsearch -regexp $Ls \"Annotation_mode\"];   if {$g_i(full) == -1} {unset g_i; warningRankingMessage $L_header \"Annotation_mode\"; return}\n    \n    set g_i(REgene)   [lsearch -regexp $Ls \"RE_gene\"]; if {$g_i(REgene) == -1} {unset g_i; warningRankingMessage $L_header \"RE_gene\"; return}\n    \n    set g_i(Ploss)      [lsearch -regexp $Ls \"P_loss_coord\"];  if {$g_i(Ploss) == -1} {unset g_i; warningRankingMessage $L_header \"P_loss_coord\"; return}\n    set g_i(Pgain)      [lsearch -regexp $Ls \"P_gain_coord\"];  if {$g_i(Pgain) == -1} {unset g_i; warningRankingMessage $L_header \"P_gain_coord\"; return}\n    set g_i(Bloss)      [lsearch -regexp $Ls \"B_loss_coord\"];  if {$g_i(Bloss) == -1} {unset g_i; warningRankingMessage $L_header \"B_loss_coord\"; return}\n    set g_i(Bgain)      [lsearch -regexp $Ls \"B_gain_coord\"];  if {$g_i(Bgain) == -1} {unset g_i; warningRankingMessage $L_header \"B_gain_coord\"; return}\n    set g_i(Psnvindel)  [lsearch -regexp $Ls \"P_snvindel_nb\"]; if {$g_i(Psnvindel) == -1} {unset g_i; warningRankingMessage $L_header \"P_snvindel_nb\"; return}\n    \n    set g_i(poPloss)    [lsearch -regexp $Ls \"po_P_loss_coord\"];  if {$g_i(poPloss) == -1} {unset g_i; warningRankingMessage $L_header \"po_P_loss_coord\"; return}\n    set g_i(poPgain)    [lsearch -regexp $Ls \"po_P_gain_coord\"];  if {$g_i(poPgain) == -1} {unset g_i; warningRankingMessage $L_header \"po_P_gain_coord\"; return}\n    set g_i(poBlossAllG)   [lsearch -regexp $Ls \"po_B_loss_allG_coord\"];  if {$g_i(poBlossAllG) == -1} {unset g_i; warningRankingMessage $L_header \"po_B_loss_allG_coord\"; return}\n    set g_i(poBlossSomeG)  [lsearch -regexp $Ls \"po_B_loss_someG_coord\"]; if {$g_i(poBlossSomeG) == -1} {unset g_i; warningRankingMessage $L_header \"po_B_loss_someG_coord\"; return}\n    set g_i(poBgainAllG)   [lsearch -regexp $Ls \"po_B_gain_allG_coord\"];  if {$g_i(poBgainAllG) == -1} {unset g_i; warningRankingMessage $L_header \"po_B_gain_allG_coord\"; return}\n    set g_i(poBgainSomeG)  [lsearch -regexp $Ls \"po_B_gain_someG_coord\"]; if {$g_i(poBgainSomeG) == -1} {unset g_i; warningRankingMessage $L_header \"po_B_gain_someG_coord\"; return}\n    \n    set g_i(HI) [lsearch -regexp $Ls \"HI\"];     if {$g_i(HI) == -1} {unset g_i; warningRankingMessage $L_header \"HI\"; return}\n    set g_i(TS) [lsearch -regexp $Ls \"TS\"];     if {$g_i(TS) == -1} {unset g_i; warningRankingMessage $L_header \"TS\"; return}\n    set g_i(pLI)       [lsearch -regexp $Ls \"GnomAD_pLI\"];    if {$g_i(pLI) == -1} {unset g_i; warningRankingMessage $L_header \"GnomAD_pLI\"; return}\n    set g_i(loeuf)     [lsearch -regexp $Ls \"LOEUF_bin\"];     if {$g_i(loeuf) == -1} {unset g_i; warningRankingMessage $L_header \"LOEUF_bin\"; return}\n    set g_i(HIpercent) [lsearch -regexp $Ls \"DDD_HI_percent\"]; if {$g_i(HIpercent) == -1} {unset g_i; warningRankingMessage $L_header \"DDD_HI_percent\"; return}\n    \n    set g_i(exomiser)    [lsearch -regexp $Ls \"Exomiser_gene_pheno_score\"];\n    set g_i(phenogenius) [lsearch -regexp $Ls \"PhenoGenius_specificity\"];\n    \n    set g_i(morbid)    [lsearch -regexp $Ls \"OMIM_morbid\"]; if {$g_i(morbid) == -1} {unset g_i; warningRankingMessage $L_header \"OMIM_morbid\"; return}\n    \n    set g_i(location)    [lsearch -regexp $Ls \"Location\"];               if {$g_i(location) == -1} {unset g_i; warningRankingMessage $L_header \"Location\"; return}\n    set g_i(location2)   [lsearch -regexp $Ls \"Location2\"];              if {$g_i(location2) == -1} {unset g_i; warningRankingMessage $L_header \"Location2\"; return}\n    set g_i(CDSlength)   [lsearch -regexp $Ls \"Overlapped_CDS_length\"];  if {$g_i(CDSlength) == -1} {unset g_i; warningRankingMessage $L_header \"Overlapped_CDS_length\"; return}\n    set g_i(CDSpercent)  [lsearch -regexp $Ls \"Overlapped_CDS_percent\"]; if {$g_i(CDSpercent) == -1} {unset g_i; warningRankingMessage $L_header \"Overlapped_CDS_percent\"; return}\n    set g_i(frameshift)  [lsearch -regexp $Ls \"Frameshift\"];             if {$g_i(frameshift) == -1} {unset g_i; warningRankingMessage $L_header \"Frameshift\"; return}\n    set g_i(NbExons)     [lsearch -regexp $Ls \"Exon_count\"];        if {$g_i(NbExons) == -1} {unset g_i; warningRankingMessage $L_header \"Exon_count\"; return}\n    \n    # If we have all the needed information, ranking will be done\n    set g_AnnotSV(ranking) 1\n}\n\n\n\n## Rank the pathogenicity of the \"DEL\" SV following the ACMG classification.\n## Creation of 2 global variables:\n## - g_rankingScore($AnnotSV_ID)\n## - g_rankingExplanations($AnnotSV_ID)\nproc SVrankingLoss {L_annotations} {\n    \n    global g_AnnotSV\n    global g_i\n    global g_rankingExplanations\n    global g_rankingScore\n    global g_rankingCriteria\n    \n    set Ls [split $L_annotations \"\\t\"]\n    set AnnotSV_ID \"[lindex $Ls 0]\"\n    set AnnotationMode [lindex $Ls $g_i(full)]\n    if {$AnnotationMode eq \"full\"} {\n        \n        # In case of SV redundancy in the input file\n        if {[info exists g_i(fullDone,$AnnotSV_ID)]} {\n            set g_i(splitDone,$AnnotSV_ID) 1\n            return\n        }\n        set g_i(fullDone,$AnnotSV_ID) 1\n        \n        set NbGenes   [lindex $Ls $g_i(NbGenes)]\n        set REgene    [lindex $Ls $g_i(REgene)]\n        set Ploss     [lindex $Ls $g_i(Ploss)]\n        set poPloss   [lindex $Ls $g_i(poPloss)]\n        set Bloss     [lindex $Ls $g_i(Bloss)]\n        set poBlossSomeG [lindex $Ls $g_i(poBlossSomeG)]\n        set poBlossAllG  [lindex $Ls $g_i(poBlossAllG)]\n        \n        ## Section 1: Initial assessment of genomic content\n        ####################################################################################################################\n        if {$REgene eq \"\" && $NbGenes eq \"0\"} {\n            # 1B. Does NOT contain protein-coding or any known functionally important elements (default -0.60)\n            set g_rankingScore($AnnotSV_ID) \"$g_rankingCriteria(1B_Loss)\"\n            set g_rankingExplanations($AnnotSV_ID) \"1B (cf Gene_count, RE_gene, $g_rankingCriteria(1B_Loss));\"\n        } else {\n            # 1A. Contains protein-coding or other known functionally important elements (default +0.00)\n            set g_rankingScore($AnnotSV_ID) \"$g_rankingCriteria(1A_Loss)\"\n            set g_rankingExplanations($AnnotSV_ID) \"1A (cf Gene_count, RE_gene, +$g_rankingCriteria(1A_Loss));\"\n        }\n        \n        ## Section 2: Overlap with:\n        ## \t\t- established/predicted haploinsufficiency (HI)\n        ## \t\t- known pathogenic Loss SV\n        ## \t\t- established benign genes/genomic regions\n        ##            (Skip to section 3 if your copy-number loss DOES NOT overlap these types of genes/regions)\n        #####################################################################################################################\n        if {$Ploss ne \"\"} {\n            # 2A. Complete overlap of an established HI gene/genomic region (default +1.00)\n            set g_rankingExplanations($AnnotSV_ID,2A) \"2A (cf P_loss_source, +$g_rankingCriteria(2A_Loss));\"\n        } else {\n            if {$poPloss ne \"\"} {\n                # 2B. Partial overlap of a known pathogenic Loss SV (default +0.00)\n                set g_rankingExplanations($AnnotSV_ID,2B) \"2B (cf po_P_loss_source, HI, OMIM_morbid, +$g_rankingCriteria(2B_Loss);\"\n            }\n            if {$Bloss ne \"\"} {\n                # 2F. Completely contained within an established benign CNV region (default -1.00)\n                # 4O. Overlap with common population variation (completely contained within a common population CNV) (default -1.00)\n                set g_rankingExplanations($AnnotSV_ID,2F) \"2F/4O (cf B_loss_source, $g_rankingCriteria(2F-4O_Loss));\"\n            } elseif {$poBlossSomeG ne \"\"} {\n                # 2G. Overlaps an established benign CNV, but includes additional genomic material (default +0.00)\n                set g_rankingExplanations($AnnotSV_ID,2G) \"2G (cf po_B_loss_someG_source, +$g_rankingCriteria(2G_Loss));\"\n            }\n        }\n        \n        ## Section 3: Evaluation of gene number\n        ####################################################################################################################\n        if {$NbGenes <= 24} {\n            # 3A. 0-24 genes (default +0.00)\n            if {$NbGenes < 2} {\n                set g_rankingExplanations($AnnotSV_ID,3A) \"3A ($NbGenes gene, +$g_rankingCriteria(3A_Loss));\"\n            } else {\n                set g_rankingExplanations($AnnotSV_ID,3A) \"3A ($NbGenes genes, +$g_rankingCriteria(3A_Loss));\"\n            }\n        } elseif {$NbGenes <= 35} {\n            # 3B. 25-34 genes (default +0.45)\n            set g_rankingExplanations($AnnotSV_ID,3B) \"3B ($NbGenes genes, +$g_rankingCriteria(3B_Loss));\"\n        } else {\n            # 3C. 35+ genes (default +0.90)\n            set g_rankingExplanations($AnnotSV_ID,3C) \"3C ($NbGenes genes, +$g_rankingCriteria(3C_Loss));\"\n        }\n        \n        ## Section 4: Detailed evaluation of genomic content using cases from published literature, public databases, and/or internal lab data\n        ##            (Skip to section 5 if either your CNV overlapped with an established HI gene/region in section 2,\n        ##             OR there have been no reports associating either the CNV or any genes within the CNV with human phenotypes\n        ##             caused by loss of function [LOF] or copy-number loss)\n        ####################################################################################################################\n        \n        if {$poBlossAllG ne \"\"} {\n            # 4O. Overlap with common population variation (completely contained within a common population CNV\n            #     OR contains no additional genomic material).(default -1.00)\n            if {![info exists g_rankingExplanations($AnnotSV_ID,2F)]} {\n                # Does not add a -1 additional score if 2F/4O is completed.\n                set g_rankingExplanations($AnnotSV_ID,4O) \"4O (cf B_loss_source, po_B_loss_allG_source, $g_rankingCriteria(4O_Loss));\"\n            }\n        }\n        \n        ## Section 5: Evaluation of inheritance pattern/family history for patient being studied\n        ####################################################################################################################\n        if {$REgene ne \"\"} {\n            set L_infos [split $REgene \"\\\\\\);\"]\n            set bestEx \"0\"\n            foreach infos $L_infos {\n                if {[regexp \"(.+?) \\\\\\(.*?EX=(.+)$\" $infos match g ex]} {\n                    regsub \",\" $ex \".\" ex\n                    if {$ex > $bestEx} {\n                        set bestEx $ex\n                        set bestG $g\n                    }\n                }\n            }\n            if {$bestEx >= 0.7} {\n                # 5H. Inheritance information is unavailable or uninformative. The patient phenotype is highly specific and consistent with what has been described in similar cases (default +0.30)\n                lappend g_rankingExplanations($AnnotSV_ID,5H) \"RE:$bestG\"\n            } elseif {$bestEx >= 0.5} {\n                # 5G. Inheritance information is unavailable or uninformative. The patient phenotype is nonspecific, but is consistent with what has been described in similar cases (default +0.10)\n                lappend g_rankingExplanations($AnnotSV_ID,5G) \"RE:$bestG\"\n            }\n        }\n        \n    } else {\n        ## Split lines\n        \n        # In case of SV redundancy in the input file\n        if {[info exists g_i(splitDone,$AnnotSV_ID)]} {return}\n        \n        ## Section 2: Overlap with:\n        ##              - established/predicted haploinsufficiency (HI)\n        ##              - known pathogenic Loss SV\n        ##              - established benign genes/genomic regions\n        ##            (Skip to section 3 if your copy-number loss DOES NOT overlap these types of genes/regions)\n        #####################################################################################################################\n        set HI     [lindex $Ls $g_i(HI)]\n        set morbid [lindex $Ls $g_i(morbid)]\n        set gene   [lindex $Ls $g_i(gene)]\n        set exomiser    [lindex $Ls $g_i(exomiser)]\n        regsub \",\" $exomiser \".\" exomiser\n        set phenogenius [lindex $Ls $g_i(phenogenius)]\n        if {$HI eq \"3\" || $morbid eq \"yes\"} {\n            set location   [lindex $Ls $g_i(location)]\n            set location2  [lindex $Ls $g_i(location2)]\n            set CDSlength  [lindex $Ls $g_i(CDSlength)]\n            set CDSpercent [lindex $Ls $g_i(CDSpercent)]\n            regsub \",\" $CDSpercent \".\" CDSpercent\n            set Psnvindel  [lindex $Ls $g_i(Psnvindel)]\n            set NbExons    [lindex $Ls $g_i(NbExons)]\n            \n            if {[regexp \"^5'UTR\" $location2] && ![regexp \"3'UTR$\" $location2]} {\n                # 2C. Partial overlap with the 5’ end of an established HI gene (3’ end of the gene not involved)…\n                if {$CDSlength ne \"0\"} {\n                    # 2C-1. …and coding sequence is involved (default +0.90)\n                    lappend g_rankingExplanations($AnnotSV_ID,2C-1) \"$gene\"\n                } else {\n                    # 2C-2. …and only the 5’ UTR is involved (default +0.00)\n                    lappend g_rankingExplanations($AnnotSV_ID,2C-2) \"$gene\"\n                }\n            } elseif {[regexp \"3'UTR$\" $location2] && ![regexp \"^5'UTR\" $location2]} {\n                # 2D. Partial overlap with the 3’ end of an established HI gene (5’ end of the gene not involved)…\n                if {$CDSlength eq \"0\"} {\n                    # 2D-1. …and only the 3’ untranslated region is involved (default +0.00)\n                    lappend g_rankingExplanations($AnnotSV_ID,2D-1) \"$gene\"\n                } elseif {$location eq \"exon${NbExons}-txEnd\" && $Psnvindel ne \"\"} {\n                    # 2D-2. …and only the last exon is involved. Other established pathogenic snv/indel have been reported in the SV (default +0.90)\n                    lappend g_rankingExplanations($AnnotSV_ID,2D-2) \"$gene\"\n                } elseif {$location eq \"exon${NbExons}-txEnd\"} {\n                    # 2D-3. …and only the last exon is involved. No other established pathogenic snv/indel have been reported in the SV (default +0.45)\n                    lappend g_rankingExplanations($AnnotSV_ID,2D-3) \"$gene\"\n                } elseif {$location ne \"exon${NbExons}-txEnd\" && $location ne \"intron[expr {${NbExons}-1}]-txEnd\"} {\n                    # 2D-4. …and it includes other exons in addition to the last exon. Nonsense-mediated decay is expected to occur (default +0.90)\n                    lappend g_rankingExplanations($AnnotSV_ID,2D-4) \"$gene\"\n                }\n            } elseif {![regexp \"txStart|txEnd\" $location]} {\n                # 2E. Both breakpoints are within the same gene (intragenic CNV; gene-level sequence variant) AND...\n                set frameshift [lindex $Ls $g_i(frameshift)]\n                # At least 1 exon overlapped ?? <=> (exon'i' in location) OR (location eq intron'i'-intron'j') BUT NOT (location eq intron'i'-intron'i')\n                set exonOverlapped 0\n                if {[regexp \"exon\" $location]} {\n                    set exonOverlapped 1\n                } elseif {[regsub -all \"intron\" $location \"\" tutu]} {\n                    if {[string index $tutu 0] ne [string index $tutu 2]} {\n                        set exonOverlapped 1\n                    }\n                }\n                if {$frameshift eq \"yes\"} {\n                    # 2E-1. ...frameshift (default +0.90)\n                    lappend g_rankingExplanations($AnnotSV_ID,2E-1) \"$gene\"\n                } elseif {$exonOverlapped && $Psnvindel ne \"\" && $CDSpercent >= 10} {\n                    # 2E-2. ...exon(s) overlapped AND pathogenic snv/indel overlapped AND SV removes > 10% of protein (default +0.45)\n                    lappend g_rankingExplanations($AnnotSV_ID,2E-2) \"$gene\"\n                } elseif {$exonOverlapped && $Psnvindel ne \"\" && $CDSpercent < 10} {\n                    # 2E-3. ...exon(s) overlapped AND pathogenic snv/indel overlapped AND SV removes < 10% of protein (default +0.30)\n                    lappend g_rankingExplanations($AnnotSV_ID,2E-3) \"$gene\"\n                } elseif {$exonOverlapped && $Psnvindel eq \"\" && $CDSpercent > 10} {\n                    # 2E-4. ...>=1 exon deleted AND no established pathogenic snv/indel have been reported in the observed CNV AND variant removes > 10% of protein (default +0.20)\n                    lappend g_rankingExplanations($AnnotSV_ID,2E-4) \"$gene\"\n                }\n            }\n        }\n        \n        # Evaluation of the 2H criteria\n        set pLI        [lindex $Ls $g_i(pLI)]\n        regsub -all \",\" $pLI \".\" pLI\n        set loeuf      [lindex $Ls $g_i(loeuf)]\n        regsub -all \",\" $loeuf \".\" loeuf\n        set HIpercent  [lindex $Ls $g_i(HIpercent)]\n        regsub -all \",\" $HIpercent \".\" HIpercent\n        set i 0\n        if {$pLI >= 0.9} {incr i}\n        if {$HIpercent <= 10} {incr i}\n        \n        if {$i >= 2} {\n            # 2H. Two or more HI predictors suggest that AT LEAST ONE gene in the interval is HI (default +0.15)\n            lappend g_rankingExplanations($AnnotSV_ID,2H) \"$gene\"\n        }\n        \n        ## Section 5: Evaluation of inheritance pattern/family history for patient being studied\n        ####################################################################################################################\n        if {$exomiser >= 0.7 || $phenogenius eq \"A\"} {\n            # 5H. Inheritance information is unavailable or uninformative. The patient phenotype is highly specific and consistent with what has been described in similar cases (default +0.30)\n            lappend g_rankingExplanations($AnnotSV_ID,5H) \"$gene\"\n        } elseif {$exomiser >= 0.5 || $phenogenius eq \"B\"} {\n            # 5G. Inheritance information is unavailable or uninformative. The patient phenotype is nonspecific, but is consistent with what has been described in similar cases (default +0.10)\n            lappend g_rankingExplanations($AnnotSV_ID,5G) \"$gene\"\n        }\n    }\n    \n    return\n}\n\n# Add the higher score of each section\n# (WARNING: Evaluation of the different \"if\" statements should be done from the highest score to the lowest score)\nproc achieveSVrankingLoss {AnnotSV_ID} {\n    \n    global g_rankingScore\n    global g_rankingExplanations\n    global g_achieve\n    global g_rankingCriteria\n    \n    # In case of SV redundancy in the input file\n    if {[info exists g_achieve($AnnotSV_ID)]} {return}\n    set g_achieve($AnnotSV_ID) \"\"\n    \n    if {![info exists g_rankingScore($AnnotSV_ID)]} {set g_rankingScore($AnnotSV_ID) \"\"; return}\n    \n    ## Section 2: Overlap with established/predicted haploinsufficiency (HI) or established benign genes/genomic regions\n    ##            (Skip to section 3 if your copy-number loss DOES NOT overlap these types of genes/regions)\n    #####################################################################################################################\n    \n    # Add the higher score of the section 2:\n    # - Evaluate scores from the higher (positive value) to the lower (negative value); stop the evaluation at the first match (only the higher match is reported)\n    #   (the \"0\" scores are evaluated in a second time)\n    \n    # 4O: Skip to section 5 if either your CNV overlapped with a pathogenic Loss SV in section 2\n    \n    if {[info exists g_rankingExplanations($AnnotSV_ID,2A)]} {\n        # 2A\n        set g_rankingScore($AnnotSV_ID) [expr {$g_rankingScore($AnnotSV_ID)+$g_rankingCriteria(2A_Loss)}]\n        append g_rankingExplanations($AnnotSV_ID) \"$g_rankingExplanations($AnnotSV_ID,2A)\"\n    } elseif {[info exists g_rankingExplanations($AnnotSV_ID,2C-1)]} {\n        # 2C-1\n        set g_rankingScore($AnnotSV_ID) [expr {$g_rankingScore($AnnotSV_ID)+$g_rankingCriteria(2C-1_Loss)}]\n        append g_rankingExplanations($AnnotSV_ID) \"2C-1 ([join [lsort -unique $g_rankingExplanations($AnnotSV_ID,2C-1)] \"/\"], +$g_rankingCriteria(2C-1_Loss));\"\n    } elseif {[info exists g_rankingExplanations($AnnotSV_ID,2D-2)]} {\n        # 2D-2\n        set g_rankingScore($AnnotSV_ID) [expr {$g_rankingScore($AnnotSV_ID)+$g_rankingCriteria(2D-2_Loss)}]\n        append g_rankingExplanations($AnnotSV_ID) \"2D-2 ([join [lsort -unique $g_rankingExplanations($AnnotSV_ID,2D-2)] \"/\"], +$g_rankingCriteria(2D-2_Loss));\"\n    } elseif {[info exists g_rankingExplanations($AnnotSV_ID,2D-4)]} {\n        # 2D-4\n        set g_rankingScore($AnnotSV_ID) [expr {$g_rankingScore($AnnotSV_ID)+$g_rankingCriteria(2D-4_Loss)}]\n        append g_rankingExplanations($AnnotSV_ID) \"2D-4 ([join [lsort -unique $g_rankingExplanations($AnnotSV_ID,2D-4)] \"/\"], +$g_rankingCriteria(2D-4_Loss));\"\n    } elseif {[info exists g_rankingExplanations($AnnotSV_ID,2E-1)]} {\n        # 2E-1\n        set g_rankingScore($AnnotSV_ID) [expr {$g_rankingScore($AnnotSV_ID)+$g_rankingCriteria(2E-1_Loss)}]\n        append g_rankingExplanations($AnnotSV_ID) \"2E-1 ([join [lsort -unique $g_rankingExplanations($AnnotSV_ID,2E-1)] \"/\"], +$g_rankingCriteria(2E-1_Loss));\"\n    } elseif {[info exists g_rankingExplanations($AnnotSV_ID,2E-2)]} {\n        # 2E-2\n        set g_rankingScore($AnnotSV_ID) [expr {$g_rankingScore($AnnotSV_ID)+$g_rankingCriteria(2E-2_Loss)}]\n        append g_rankingExplanations($AnnotSV_ID) \"2E-2 ([join [lsort -unique $g_rankingExplanations($AnnotSV_ID,2E-2)] \"/\"], +$g_rankingCriteria(2E-2_Loss));\"\n    } elseif {[info exists g_rankingExplanations($AnnotSV_ID,2D-3)]} {\n        # 2D-3\n        set g_rankingScore($AnnotSV_ID) [expr {$g_rankingScore($AnnotSV_ID)+$g_rankingCriteria(2D-3_Loss)}]\n        append g_rankingExplanations($AnnotSV_ID) \"2D-3 ([join [lsort -unique $g_rankingExplanations($AnnotSV_ID,2D-3)] \"/\"], +$g_rankingCriteria(2D-3_Loss));\"\n    } elseif {[info exists g_rankingExplanations($AnnotSV_ID,2E-3)]} {\n        # 2E-3\n        set g_rankingScore($AnnotSV_ID) [expr {$g_rankingScore($AnnotSV_ID)+$g_rankingCriteria(2E-3_Loss)}]\n        append g_rankingExplanations($AnnotSV_ID) \"2E-3 ([join [lsort -unique $g_rankingExplanations($AnnotSV_ID,2E-3)] \"/\"], +$g_rankingCriteria(2E-3_Loss));\"\n    } elseif {[info exists g_rankingExplanations($AnnotSV_ID,2E-4)]} {\n        # 2E-4\n        set g_rankingScore($AnnotSV_ID) [expr {$g_rankingScore($AnnotSV_ID)+$g_rankingCriteria(2E-4_Loss)}]\n        append g_rankingExplanations($AnnotSV_ID) \"2E-4 ([join [lsort -unique $g_rankingExplanations($AnnotSV_ID,2E-4)] \"/\"]), +$g_rankingCriteria(2E-4_Loss);\"\n    } elseif {[info exists g_rankingExplanations($AnnotSV_ID,2H)]} {\n        # 2H\n        set g_rankingScore($AnnotSV_ID) [expr {$g_rankingScore($AnnotSV_ID)+$g_rankingCriteria(2H_Loss)}]\n        #set g_rankingScore($AnnotSV_ID) [expr {$g_rankingScore($AnnotSV_ID)+$g_rankingScore($AnnotSV_ID,maxLoeuf)}]\n        append g_rankingExplanations($AnnotSV_ID) \"2H ([join [lsort -unique $g_rankingExplanations($AnnotSV_ID,2H)] \"/\"], +$g_rankingCriteria(2H_Loss));\"\n    } elseif {[info exists g_rankingExplanations($AnnotSV_ID,2F)]} {\n        # 2F\n        set g_rankingScore($AnnotSV_ID) [expr {$g_rankingScore($AnnotSV_ID)+$g_rankingCriteria(2F-4O_Loss)}]\n        append g_rankingExplanations($AnnotSV_ID) \"$g_rankingExplanations($AnnotSV_ID,2F)\"\n    }\n    \n    # - Evaluate the \"0\" scores; all the match are reported.\n    if {[info exists g_rankingExplanations($AnnotSV_ID,2B)] && ![regexp \"2A|2C|2D|2E\" $g_rankingExplanations($AnnotSV_ID)]} {\n        # 2B\n        append g_rankingExplanations($AnnotSV_ID) \"$g_rankingExplanations($AnnotSV_ID,2B)\"\n    }\n    if {[info exists g_rankingExplanations($AnnotSV_ID,2C-2)]} {\n        # 2C-2\n        append g_rankingExplanations($AnnotSV_ID) \"2C-2 ([join [lsort -unique $g_rankingExplanations($AnnotSV_ID,2C-2)] \"/\"],+$g_rankingCriteria(2C-2_Loss));\"\n    }\n    if {[info exists g_rankingExplanations($AnnotSV_ID,2D-1)]} {\n        # 2D-1\n        append g_rankingExplanations($AnnotSV_ID) \"2D-1 ([join [lsort -unique $g_rankingExplanations($AnnotSV_ID,2D-1)] \"/\"],+$g_rankingCriteria(2D-1_Loss));\"\n    }\n    if {[info exists g_rankingExplanations($AnnotSV_ID,2G)]} {\n        # 2G\n        append g_rankingExplanations($AnnotSV_ID) \"$g_rankingExplanations($AnnotSV_ID,2G)\"\n    }\n    \n    ## Section 3: Evaluation of gene number\n    ####################################################################################################################\n    \n    # Add the higher score of the section 3\n    if {[info exists g_rankingExplanations($AnnotSV_ID,3C)]} {\n        # 3C\n        set g_rankingScore($AnnotSV_ID) [expr {$g_rankingScore($AnnotSV_ID)+$g_rankingCriteria(3C_Loss)}]\n        append g_rankingExplanations($AnnotSV_ID) \"$g_rankingExplanations($AnnotSV_ID,3C)\"\n    } elseif {[info exists g_rankingExplanations($AnnotSV_ID,3B)]} {\n        # 3B\n        set g_rankingScore($AnnotSV_ID) [expr {$g_rankingScore($AnnotSV_ID)+$g_rankingCriteria(3B_Loss)}]\n        append g_rankingExplanations($AnnotSV_ID) \"$g_rankingExplanations($AnnotSV_ID,3B)\"\n    } elseif {[info exists g_rankingExplanations($AnnotSV_ID,3A)]} {\n        # 3A\n        set g_rankingScore($AnnotSV_ID) [expr {$g_rankingScore($AnnotSV_ID)+$g_rankingCriteria(3A_Loss)}]\n        append g_rankingExplanations($AnnotSV_ID) \"$g_rankingExplanations($AnnotSV_ID,3A)\"\n    }\n    \n    ## Section 4: Detailed evaluation of genomic content using cases from published literature, public databases, and/or internal lab data\n    ##            (Skip to section 5 if either your CNV overlapped with an established HI gene/region in section 2,\n    ##             OR there have been no reports associating either the CNV or any genes within the CNV with human phenotypes\n    ##             caused by loss of function [LOF] or copy-number loss)\n    ####################################################################################################################\n    \n    # Add the higher score of the section 4 (only if no positive score has been attributed in section 2)\n    if {[info exists g_rankingExplanations($AnnotSV_ID,4O)]} {\n        # 4O\n        if {![info exists g_rankingExplanations($AnnotSV_ID,2A)] && \\\n            ![info exists g_rankingExplanations($AnnotSV_ID,2F)] && \\\n            ![info exists g_rankingExplanations($AnnotSV_ID,2C-1)] && \\\n            ![info exists g_rankingExplanations($AnnotSV_ID,2D-2)] && \\\n            ![info exists g_rankingExplanations($AnnotSV_ID,2D-3)] && \\\n            ![info exists g_rankingExplanations($AnnotSV_ID,2D-4)] && \\\n            ![info exists g_rankingExplanations($AnnotSV_ID,2E-1)] && \\\n            ![info exists g_rankingExplanations($AnnotSV_ID,2E-2)] && \\\n            ![info exists g_rankingExplanations($AnnotSV_ID,2E-3)] && \\\n            ![info exists g_rankingExplanations($AnnotSV_ID,2E-4)] && \\\n            ![info exists g_rankingExplanations($AnnotSV_ID,2EH)]} {\n            set g_rankingScore($AnnotSV_ID) [expr {$g_rankingScore($AnnotSV_ID)+$g_rankingCriteria(4O_Loss)}]\n            append g_rankingExplanations($AnnotSV_ID) \"$g_rankingExplanations($AnnotSV_ID,4O)\"\n        }\n    }\n    \n    ## Section 5: Evaluation of inheritance pattern/family history for patient being studied\n    ####################################################################################################################\n    \n    # Add the higher score of the section 5\n    if {[info exists g_rankingExplanations($AnnotSV_ID,5H)]} {\n        # 5H\n        set g_rankingScore($AnnotSV_ID) [expr {$g_rankingScore($AnnotSV_ID)+$g_rankingCriteria(5H_Loss)}]\n        append g_rankingExplanations($AnnotSV_ID) \"5H ([join [lsort -unique $g_rankingExplanations($AnnotSV_ID,5H)] \"/\"], $g_rankingCriteria(5H_Loss))\"\n    } elseif {[info exists g_rankingExplanations($AnnotSV_ID,5G)]} {\n        # 5G\n        set g_rankingScore($AnnotSV_ID) [expr {$g_rankingScore($AnnotSV_ID)+$g_rankingCriteria(5G_Loss)}]\n        append g_rankingExplanations($AnnotSV_ID) \"5G ([join [lsort -unique $g_rankingExplanations($AnnotSV_ID,5G)] \"/\"], +$g_rankingCriteria(5G_Loss))\"\n    } else {\n        # 5F\n        set g_rankingScore($AnnotSV_ID) [expr {$g_rankingScore($AnnotSV_ID)+$g_rankingCriteria(5F_Loss)}]\n        append g_rankingExplanations($AnnotSV_ID) \"5F (+$g_rankingCriteria(5F_Loss))\"\n    }\n    \n    return\n}\n\n\n## Rank the pathogenicity of the \"DUP\" SV following the ACMG classification.\n## Creation of 2 global variables:\n## - g_rankingScore($AnnotSV_ID)\n## - g_rankingExplanations($AnnotSV_ID)\nproc SVrankingGain {L_annotations} {\n    \n    global g_AnnotSV\n    global g_i\n    global g_rankingExplanations\n    global g_rankingScore\n    global g_rankingCriteria\n    \n    \n    set Ls [split $L_annotations \"\\t\"]\n    set AnnotSV_ID \"[lindex $Ls 0]\"\n    \n    set AnnotationMode [lindex $Ls $g_i(full)]\n    \n    if {$AnnotationMode eq \"full\"} {\n        \n        set NbGenes   [lindex $Ls $g_i(NbGenes)]\n        set REgene    [lindex $Ls $g_i(REgene)]\n        set Pgain     [lindex $Ls $g_i(Pgain)]\n        set Bgain     [lindex $Ls $g_i(Bgain)]\n        \n        set poPgain   [lindex $Ls $g_i(poPgain)]\n        set poBgainSomeG [lindex $Ls $g_i(poBgainSomeG)]\n        set poBgainAllG  [lindex $Ls $g_i(poBgainAllG)]\n        \n        \n        ## Section 1: Initial assessment of genomic content\n        ####################################################################################################################\n        if {$REgene eq \"\" && $NbGenes eq \"0\"} {\n            # 1B. Does NOT contain protein-coding or any known functionally important elements (default -0.60)\n            set g_rankingScore($AnnotSV_ID) \"$g_rankingCriteria(1B_Gain)\"\n            set g_rankingExplanations($AnnotSV_ID) \"1B (cf Gene_count, RE_gene, $g_rankingCriteria(1B_Gain));\"\n        } else {\n            # 1A. Contains protein-coding or other known functionally important elements (default +0.00)\n            set g_rankingScore($AnnotSV_ID) \"$g_rankingCriteria(1A_Gain)\"\n            set g_rankingExplanations($AnnotSV_ID) \"1A (cf Gene_count, RE_gene, +$g_rankingCriteria(1A_Gain));\"\n        }\n        \n        ## Section 2: Overlap with established triplosensitive (TS), haploinsufficient (HI), or benign genes or genomic regions\n        ##            (Skip to section 3 if the copy-number gain DOES NOT overlap these types of genes/regions)\n        #####################################################################################################################\n        if {$Pgain ne \"\"} {\n            # 2A. Complete overlap; the TS gene or minimal critical region is fully contained within the observed copy-number gain (default +1.00)\n            set g_rankingExplanations($AnnotSV_ID,2A) \"2A (cf P_gain_source, +1.00);\"\n        } else {\n            if {$poPgain ne \"\"} {\n                # 2B. Partial overlap of a known pathogenic Gain SV (default +0.00)\n                set g_rankingExplanations($AnnotSV_ID,2B) \"2B (cf po_P_gain_source, TS, OMIM_morbid, +0.00);\"\n            }\n            \n            if {$poBgainAllG ne \"\"} {\n                #2C. Identical in gene content to the established benign copy-number gain (default -1.00)\n                set g_rankingExplanations($AnnotSV_ID,2C) \"2C (cf po_B_gain_allG_source, $g_rankingCriteria(2C_Gain));\"\n            } elseif {$Bgain ne \"\"} {\n                # 2DE. Smaller than established benign copy-number gain\n                set g_rankingExplanations($AnnotSV_ID,2DE) \"\"\n            } elseif {$poBgainAllG ne \"\"} {\n                # 2F. Larger than known benign copy-number gain, does not include additional protein-coding genes (default -1.00)\n                # => non protein coding gene list to code to differentiate of 2C\n                set g_rankingExplanations($AnnotSV_ID,2F) \"2F (cf po_B_gain_allG_source, $g_rankingCriteria(2F_Gain));\"\n            } elseif {$poBgainSomeG ne \"\"} {\n                # 2G. Overlaps a benign copy-number gain but includes additional genomic material (default +0.00)\n                set g_rankingExplanations($AnnotSV_ID,2G) \"2G (cf po_B_gain_someG_source, +$g_rankingCriteria(2G_Gain));\"\n            }\n        }\n        \n        ## Section 3: Evaluation of gene number\n        ####################################################################################################################\n        if {$NbGenes <= 34} {\n            # 3A. 0-34 genes (default +0.00)\n            if {$NbGenes < 2} {\n                set g_rankingExplanations($AnnotSV_ID,3A) \"3A ($NbGenes gene, +$g_rankingCriteria(3A_Gain));\"\n            } else {\n                set g_rankingExplanations($AnnotSV_ID,3A) \"3A ($NbGenes genes, +$g_rankingCriteria(3A_Gain));\"\n            }\n        } elseif {$NbGenes <= 49} {\n            # 3B. 35-49 genes (default +0.45)\n            set g_rankingExplanations($AnnotSV_ID,3B) \"3B ($NbGenes genes, +$g_rankingCriteria(3B_Gain));\"\n        } else {\n            # 3C. 50 or more genes (default +0.90)\n            set g_rankingExplanations($AnnotSV_ID,3C) \"3C ($NbGenes genes, +$g_rankingCriteria(3C_Gain));\"\n        }\n        \n        ##  Section 4: Detailed evaluation of genomic content using cases from published literature, public databases, and/or internal lab data\n        ##             (Note: If there have been no reports associating either the copy-number gain or any of the genes therein with human phenotypes caused by triplosensitivity, skip to section 5)\n        ####################################################################################################################\n        if {$poBgainAllG ne \"\" || $Bgain ne \"\" || $poBgainSomeG ne \"\"} {\n            # 4O. Overlap with common population variation.\n            set g_rankingExplanations($AnnotSV_ID,4O) \"4O (cf po_B_gain_AllG_source, B_gain_source, po_B_gain_SomeG_source, +$g_rankingCriteria(4O_Gain));\"\n        }\n        \n        \n        \n        ## Section 5: Evaluation of inheritance pattern/family history for patient being studied\n        ####################################################################################################################\n        if {$REgene ne \"\"} {\n            set L_infos [split $REgene \"\\\\\\);\"]\n            set bestEx \"0\"\n            foreach infos $L_infos {\n                if {[regexp \"(.+?) \\\\\\(.*?EX=(.+)$\" $infos match g ex]} {\n                    regsub \",\" $ex \".\" ex\n                    if {$ex > $bestEx} {\n                        set bestEx $ex\n                        set bestG $g\n                    }\n                }\n            }\n            if {$bestEx >= 0.7} {\n                # 5H. Inheritance information is unavailable or uninformative. The patient phenotype is highly specific and consistent with what has been described in similar cases (default +0.15)\n                lappend g_rankingExplanations($AnnotSV_ID,5H) \"RE:$bestG\"\n            } elseif {$bestEx >= 0.5} {\n                # 5G. Inheritance information is unavailable or uninformative. The patient phenotype is nonspecific, but is consistent with what has been described in similar cases (default +0.10)\n                lappend g_rankingExplanations($AnnotSV_ID,5G) \"RE:$bestG\"\n            }\n        }\n        \n    } else {\n        # Split lines\n        \n        ## Section 2: Overlap with established triplosensitive (TS), haploinsufficient (HI), or benign genes or genomic regions\n        ##            (Skip to section 3 if the copy-number gain DOES NOT overlap these types of genes/regions)\n        #####################################################################################################################\n        set HI          [lindex $Ls $g_i(HI)]\n        set morbid      [lindex $Ls $g_i(morbid)]\n        set gene        [lindex $Ls $g_i(gene)]\n        set location    [lindex $Ls $g_i(location)]\n        set exomiser    [lindex $Ls $g_i(exomiser)]\n        regsub \",\" $exomiser \".\" exomiser\n        set phenogenius [lindex $Ls $g_i(phenogenius)]\n        \n        if {[info exists g_rankingExplanations($AnnotSV_ID,2DE)]} {\n            if {![regexp \"exon|intron\" $location]} {\n                # 2D. Smaller than established benign copy-number gain, breakpoint(s) does not interrupt protein-coding genes (default -1.00)\n                set g_rankingExplanations($AnnotSV_ID,2D) \"2D (cf B_gain_source, $g_rankingCriteria(2D_Gain));\"\n            } else {\n                # 2E. Smaller than established benign copy-number gain, breakpoint(s) potentially interrupts protein-coding gene (default +0.00)\n                set g_rankingExplanations($AnnotSV_ID,2E) \"2E (cf B_gain_source, +$g_rankingCriteria(2E_Gain));\"\n            }\n        }\n        \n        if {$HI eq \"3\" || $morbid eq \"yes\"} {\n            set frameshift [lindex $Ls $g_i(frameshift)]\n            \n            if {![regexp \"^txStart\" $location] && ![regexp \"txEnd$\" $location]} {\n                # Both breakpoints are within the same HI gene / morbid gene (gene-level sequence variant, possibly resulting in loss of function [LOF]) AND...\n                if {$frameshift eq \"yes\"} {\n                    # 2I-1. ...disrupts the reading frame (+0.45)\n                    lappend g_rankingExplanations($AnnotSV_ID,2I-1) \"$gene\"\n                } elseif {$exomiser >= 0.7 || $phenogenius eq \"A\"} {\n                    # 2I-2. ...patient phenotype is highly specific and consistent with what has been described for this HI gene / morbid gene (PhenoGenius_specificity == \"A\" OR Exomiser_gene_pheno_score >= 0.7) (default +0.45)\n                    lappend g_rankingExplanations($AnnotSV_ID,2I-2) \"$gene\"\n                } else {\n                    # 2I-3. ...patient phenotype is either inconsistent with what has been described for this HI gene / morbid gene (Exomiser_gene_pheno_score < 0.7) OR unknown (default +0.00)\n                    lappend g_rankingExplanations($AnnotSV_ID,2I-3) \"$gene\"\n                }\n            } elseif {![regexp \"^txStart\" $location] || ![regexp \"txEnd$\" $location]} {\n                # One breakpoint is within an established HI gene\n                if {$exomiser >= 0.7 || $phenogenius eq \"A\"} {\n                    # 2K. One breakpoint is within an established HI gene / morbid gene, patient’s phenotype is highly specific and consistent with what is expected\n                    #     for LOF of that gene (PhenoGenius_specificity == \"A\" OR Exomiser_gene_pheno_score >= 0.7) (default +0.45)\n                    lappend g_rankingExplanations($AnnotSV_ID,2K) \"$gene\"\n                } else {\n                    # 2J. One breakpoint is within an established HI gene / morbid gene, patient’s phenotype is either inconsistent with what is expected for LOF of that gene OR unknown (default +0.00)\n                    lappend g_rankingExplanations($AnnotSV_ID,2J) \"$gene\"\n                }\n            } elseif {$location eq \"txStart-txEnd\"} {\n                # 2H. HI gene / morbid gene fully contained within observed copy-number gain AND...\n                if {$exomiser >= 0.7 || $phenogenius eq \"A\"} {\n                    # 2H-1. ...patient’s phenotype is highly specific and consistent with what is expected for LOF of that gene (PhenoGenius_specificity == \"A\" OR Exomiser_gene_pheno_score >= 0.7) (default +0.45)\n                    lappend g_rankingExplanations($AnnotSV_ID,2H-1) \"$gene\"\n                } else {\n                    # 2H-2. ...patient's phenotype is nonspecific with what is expected for LOF of that gene (Exomiser_gene_pheno_score < 0.7) (default +0.00)\n                    lappend g_rankingExplanations($AnnotSV_ID,2H-2) \"$gene\"\n                }\n            }\n        } elseif {![regexp \"^txStart\" $location] || ![regexp \"txEnd$\" $location]} {\n            # 2L. One or both breakpoints are within gene(s) of no established clinical significance (default +0.00)\n            lappend g_rankingExplanations($AnnotSV_ID,2L) \"$gene\"\n        }\n        \n        ## Section 5: Evaluation of inheritance pattern/family history for patient being studied\n        ####################################################################################################################\n        if {$exomiser >= 0.7 || $phenogenius eq \"A\"} {\n            # 5H. Inheritance information is unavailable or uninformative. The patient phenotype is highly specific and consistent with what has been described in similar cases (default +0.15)\n            lappend g_rankingExplanations($AnnotSV_ID,5H) \"$gene\"\n        } elseif {$exomiser >= 0.5  || $phenogenius eq \"B\"} {\n            # 5G. Inheritance information is unavailable or uninformative. The patient phenotype is nonspecific, but is consistent with what has been described in similar cases (default +0.10)\n            lappend g_rankingExplanations($AnnotSV_ID,5G) \"$gene\"\n        }\n    }\n    \n    return\n}\n\n\n# Add the higher score of each section\n# (WARNING: Evaluation of the different \"if\" statements should be done from the highest score to the lowest score)\nproc achieveSVrankingGain {AnnotSV_ID} {\n    \n    global g_rankingScore\n    global g_rankingExplanations\n    global g_rankingCriteria\n    \n    if {![info exists g_rankingScore($AnnotSV_ID)]} {set g_rankingScore($AnnotSV_ID) \"\"; return}\n    \n    ## Section 2: Overlap with established triplosensitive (TS), haploinsufficient (HI), or benign genes or genomic regions\n    ##            (Skip to section 3 if the copy-number gain DOES NOT overlap these types of genes/regions)\n    #####################################################################################################################\n    \n    # - Evaluate scores from the higher (positive value) to the lower (negative value); stop the evaluation at the first match (only the higher match is reported)\n    #   (the \"0\" scores are evaluated in a second time)\n    if {[info exists g_rankingExplanations($AnnotSV_ID,2A)]} {\n        # 2A\n        set g_rankingScore($AnnotSV_ID) [expr {$g_rankingScore($AnnotSV_ID)+$g_rankingCriteria(2A_Gain)}]\n        append g_rankingExplanations($AnnotSV_ID) \"$g_rankingExplanations($AnnotSV_ID,2A)\"\n    } elseif {[info exists g_rankingExplanations($AnnotSV_ID,2I-1)]} {\n        # 2I-1\n        set g_rankingScore($AnnotSV_ID) [expr {$g_rankingScore($AnnotSV_ID)+$g_rankingCriteria(2I-1_Gain)}]\n        append g_rankingExplanations($AnnotSV_ID) \"2I-1 ([join [lsort -unique $g_rankingExplanations($AnnotSV_ID,2I-1)] \"/\"], +$g_rankingCriteria(2I-1_Gain));\"\n    } elseif {[info exists g_rankingExplanations($AnnotSV_ID,2I-2)]} {\n        # 2I-2\n        set g_rankingScore($AnnotSV_ID) [expr {$g_rankingScore($AnnotSV_ID)+$g_rankingCriteria(2I-2_Gain)}]\n        append g_rankingExplanations($AnnotSV_ID) \"2I-2 ([join [lsort -unique $g_rankingExplanations($AnnotSV_ID,2I-2)] \"/\"], +$g_rankingCriteria(2I-2_Gain));\"\n    } elseif {[info exists g_rankingExplanations($AnnotSV_ID,2K)]} {\n        # 2K\n        set g_rankingScore($AnnotSV_ID) [expr {$g_rankingScore($AnnotSV_ID)+$g_rankingCriteria(2K_Gain)}]\n        append g_rankingExplanations($AnnotSV_ID) \"2K ([join [lsort -unique $g_rankingExplanations($AnnotSV_ID,2K)] \"/\"], +$g_rankingCriteria(2K_Gain));\"\n    } elseif {[info exists g_rankingExplanations($AnnotSV_ID,2H-1)]} {\n        # 2H-1\n        set g_rankingScore($AnnotSV_ID) [expr {$g_rankingScore($AnnotSV_ID)+$g_rankingCriteria(2H-1_Gain)}]\n        append g_rankingExplanations($AnnotSV_ID) \"2H-1 ([join [lsort -unique $g_rankingExplanations($AnnotSV_ID,2H-1)] \"/\"], +$g_rankingCriteria(2H-1_Gain));\"\n    } elseif {[info exists g_rankingExplanations($AnnotSV_ID,2C)]} {\n        # 2C\n        set g_rankingScore($AnnotSV_ID) [expr {$g_rankingScore($AnnotSV_ID)+$g_rankingCriteria(2C_Gain)}]\n        append g_rankingExplanations($AnnotSV_ID) \"$g_rankingExplanations($AnnotSV_ID,2C)\"\n    } elseif {[info exists g_rankingExplanations($AnnotSV_ID,2D)]} {\n        # 2D\n        set g_rankingScore($AnnotSV_ID) [expr {$g_rankingScore($AnnotSV_ID)+$g_rankingCriteria(2D_Gain)}]\n        append g_rankingExplanations($AnnotSV_ID) \"$g_rankingExplanations($AnnotSV_ID,2D)\"\n    }  elseif {[info exists g_rankingExplanations($AnnotSV_ID,2F)]} {\n        # 2F\n        set g_rankingScore($AnnotSV_ID) [expr {$g_rankingScore($AnnotSV_ID)+$g_rankingCriteria(2F_Gain)}]\n        append g_rankingExplanations($AnnotSV_ID) \"$g_rankingExplanations($AnnotSV_ID,2F)\"\n    }\n    \n    \n    # - Evaluate the \"0\" scores; all the match are reported.\n    if {[info exists g_rankingExplanations($AnnotSV_ID,2B)]} {\n        # 2B\n        set g_rankingScore($AnnotSV_ID) [expr {$g_rankingScore($AnnotSV_ID)+$g_rankingCriteria(2B_Gain)}]\n        append g_rankingExplanations($AnnotSV_ID) \"$g_rankingExplanations($AnnotSV_ID,2B)\"\n    }\n    if {[info exists g_rankingExplanations($AnnotSV_ID,2E)]} {\n        # 2E\n        set g_rankingScore($AnnotSV_ID) [expr {$g_rankingScore($AnnotSV_ID)+$g_rankingCriteria(2E_Gain)}]\n        append g_rankingExplanations($AnnotSV_ID) \"$g_rankingExplanations($AnnotSV_ID,2E)\"\n    }\n    if {[info exists g_rankingExplanations($AnnotSV_ID,2G)]} {\n        # 2G\n        set g_rankingScore($AnnotSV_ID) [expr {$g_rankingScore($AnnotSV_ID)+$g_rankingCriteria(2G_Gain)}]\n        append g_rankingExplanations($AnnotSV_ID) \"$g_rankingExplanations($AnnotSV_ID,2G)\"\n    }\n    if {[info exists g_rankingExplanations($AnnotSV_ID,2H-2)]} {\n        # 2H-2\n        set g_rankingScore($AnnotSV_ID) [expr {$g_rankingScore($AnnotSV_ID)+$g_rankingCriteria(2H-2_Gain)}]\n        append g_rankingExplanations($AnnotSV_ID) \"2H-2 ([join [lsort -unique $g_rankingExplanations($AnnotSV_ID,2H-2)] \"/\"], +$g_rankingCriteria(2H-2_Gain));\"\n    }\n    if {[info exists g_rankingExplanations($AnnotSV_ID,2I-3)]} {\n        # 2I-3\n        set g_rankingScore($AnnotSV_ID) [expr {$g_rankingScore($AnnotSV_ID)+$g_rankingCriteria(2I-3_Gain)}]\n        append g_rankingExplanations($AnnotSV_ID) \"2I-3 ([join [lsort -unique $g_rankingExplanations($AnnotSV_ID,2I-3)] \"/\"], +$g_rankingCriteria(2I-3_Gain));\"\n    }\n    if {[info exists g_rankingExplanations($AnnotSV_ID,2J)]} {\n        # 2J\n        set g_rankingScore($AnnotSV_ID) [expr {$g_rankingScore($AnnotSV_ID)+$g_rankingCriteria(2J_Gain)}]\n        append g_rankingExplanations($AnnotSV_ID) \"2J ([join [lsort -unique $g_rankingExplanations($AnnotSV_ID,2J)] \"/\"], +$g_rankingCriteria(2J_Gain));\"\n    }\n    if {[info exists g_rankingExplanations($AnnotSV_ID,2L)]} {\n        # 2L\n        set g_rankingScore($AnnotSV_ID) [expr {$g_rankingScore($AnnotSV_ID)+$g_rankingCriteria(2L_Gain)}]\n        append g_rankingExplanations($AnnotSV_ID) \"2L ([join [lsort -unique $g_rankingExplanations($AnnotSV_ID,2L)] \"/\"], +$g_rankingCriteria(2L_Gain));\"\n    }\n    \n    \n    ## Section 3: Evaluation of gene number\n    ####################################################################################################################\n    \n    # Add the higher score of the section 3\n    if {[info exists g_rankingExplanations($AnnotSV_ID,3C)]} {\n        # 3C\n        set g_rankingScore($AnnotSV_ID) [expr {$g_rankingScore($AnnotSV_ID)+$g_rankingCriteria(3C_Gain)}]\n        append g_rankingExplanations($AnnotSV_ID) \"$g_rankingExplanations($AnnotSV_ID,3C)\"\n    } elseif {[info exists g_rankingExplanations($AnnotSV_ID,3B)]} {\n        # 3B\n        set g_rankingScore($AnnotSV_ID) [expr {$g_rankingScore($AnnotSV_ID)+$g_rankingCriteria(3B_Gain)}]\n        append g_rankingExplanations($AnnotSV_ID) \"$g_rankingExplanations($AnnotSV_ID,3B)\"\n    } elseif {[info exists g_rankingExplanations($AnnotSV_ID,3A)]} {\n        # 3A\n        set g_rankingScore($AnnotSV_ID) [expr {$g_rankingScore($AnnotSV_ID)+$g_rankingCriteria(3A_Gain)}]\n        append g_rankingExplanations($AnnotSV_ID) \"$g_rankingExplanations($AnnotSV_ID,3A)\"\n    }\n    \n    ## Section 4: Detailed evaluation of genomic content using cases from published literature, public databases, and/or internal lab data\n    ##            (Note: If there have been no reports associating either the copy-number gain or any of the genes therein with human phenotypes caused by triplosensitivity, skip to section 5)\n    ####################################################################################################################\n    \n    # Add the higher score of the section 4\n    if {[info exists g_rankingExplanations($AnnotSV_ID,4O)]} {\n        # 4O\n        set g_rankingScore($AnnotSV_ID) [expr {$g_rankingScore($AnnotSV_ID)+$g_rankingCriteria(4O_Gain)}]\n        append g_rankingExplanations($AnnotSV_ID) \"$g_rankingExplanations($AnnotSV_ID,4O)\"\n    }\n    \n    \n    ## Section 5: Evaluation of inheritance patterns/family history for patient being studied\n    ####################################################################################################################\n    \n    # Add the higher score of the section 5\n    if {![info exists g_rankingExplanations($AnnotSV_ID,2K)]} {\n        if {[info exists g_rankingExplanations($AnnotSV_ID,5H)]} {\n            # 5H\n            set g_rankingScore($AnnotSV_ID) [expr {$g_rankingScore($AnnotSV_ID)+0.15}]\n            append g_rankingExplanations($AnnotSV_ID) \"5H ([join [lsort -unique $g_rankingExplanations($AnnotSV_ID,5H)] \"/\"], +$g_rankingCriteria(5H_Gain))\"\n        } elseif {[info exists g_rankingExplanations($AnnotSV_ID,5G)]} {\n            # 5G\n            set g_rankingScore($AnnotSV_ID) [expr {$g_rankingScore($AnnotSV_ID)+$g_rankingCriteria(5G_Gain)}]\n            append g_rankingExplanations($AnnotSV_ID) \"5G ([join [lsort -unique $g_rankingExplanations($AnnotSV_ID,5G)] \"/\"], +$g_rankingCriteria(5G_Gain))\"\n        } else {\n            # 5F\n            set g_rankingScore($AnnotSV_ID) [expr {$g_rankingScore($AnnotSV_ID)+$g_rankingCriteria(5F_Gain)}]\n            append g_rankingExplanations($AnnotSV_ID) \"5F (+$g_rankingCriteria(5F_Gain))\"\n        }\n    }\n    \n    return\n}\n\n\n\n\n## Rank the pathogenicity of the \"INS\" SV.\n## Creation of 2 global variables:\n## - g_rankingScore($AnnotSV_ID)\n## - g_rankingExplanations($AnnotSV_ID)\nproc SVrankingINS {L_annotations} {\n    \n    global g_AnnotSV\n    global g_i\n    global g_rankingExplanations\n    global g_rankingScore\n    global g_rankingCriteria\n    \n    set Ls [split $L_annotations \"\\t\"]\n    set AnnotSV_ID \"[lindex $Ls 0]\"\n    \n    set g_rankingScore($AnnotSV_ID) \"\"\n    set g_rankingExplanations($AnnotSV_ID) \"\"\n    \n    return\n}\n\n\n## Rank the pathogenicity of the \"INV\" SV.\n## Creation of 2 global variables:\n## - g_rankingScore($AnnotSV_ID)\n## - g_rankingExplanations($AnnotSV_ID)\nproc SVrankingINV {L_annotations} {\n    \n    global g_AnnotSV\n    global g_i\n    global g_rankingExplanations\n    global g_rankingScore\n    global g_rankingCriteria\n    \n    set Ls [split $L_annotations \"\\t\"]\n    set AnnotSV_ID \"[lindex $Ls 0]\"\n    \n    set g_rankingScore($AnnotSV_ID) \"\"\n    set g_rankingExplanations($AnnotSV_ID) \"\"\n    \n    return\n}\n\n"
  },
  {
    "path": "share/tcl/AnnotSV/AnnotSV-regulatoryelements.tcl",
    "content": "############################################################################################################\n# AnnotSV 3.5.8                                                                                            #\n#                                                                                                          #\n# AnnotSV: An integrated tool for Structural Variations annotation and ranking                             #\n#                                                                                                          #\n# Copyright (C) 2017-present Veronique Geoffroy (veronique.geoffroy@inserm.fr)                             #\n#                                                                                                          #\n# This is part of AnnotSV source code.                                                                     #\n#                                                                                                          #\n# This program is free software; you can redistribute it and/or                                            #\n# modify it under the terms of the GNU General Public License                                              #\n# as published by the Free Software Foundation; either version 3                                           #\n# of the License, or (at your option) any later version.                                                   #\n#                                                                                                          #\n# This program is distributed in the hope that it will be useful,                                          #\n# but WITHOUT ANY WARRANTY; without even the implied warranty of                                           #\n# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the                                            #\n# GNU General Public License for more details.                                                             #\n#                                                                                                          #\n# You should have received a copy of the GNU General Public License                                        #\n# along with this program; If not, see <http://www.gnu.org/licenses/>.                                     #\n############################################################################################################\n\n# Is it a RefSeq gene name?\nproc isARefSeqGeneName {geneName} {\n    \n    global g_AnnotSV\n    global g_exist\n    \n    if {![info exists g_exist(RefSeq)]} {\n        set g_exist(RefSeq) \"1\"\n        \n        set genesDir \"$g_AnnotSV(annotationsDir)/Annotations_$g_AnnotSV(organism)/Genes/$g_AnnotSV(genomeBuild)\"\n        foreach L [LinesFromFile \"$genesDir/genes.RefSeq.sorted.bed\"] {\n            set Ls [split $L \"\\t\"]\n            set g_exist(RefSeq,[lindex $Ls 4]) 1\n        }\n    }\n    \n    if {[info exists g_exist(RefSeq,$geneName)]} {set test 1} else {set test 0}\n    \n    return $test\n}\n\n# Is it an ENSEMBL gene name?\nproc isAnENSEMBLgeneName {geneName} {\n    \n    global g_AnnotSV\n    global g_exist\n    \n    if {![info exists g_exist(ENSEMBL)]} {\n        set g_exist(ENSEMBL) \"1\"\n        \n        set genesDir \"$g_AnnotSV(annotationsDir)/Annotations_$g_AnnotSV(organism)/Genes/$g_AnnotSV(genomeBuild)\"\n        set ENSEMBLfile \"$genesDir/genes.ENSEMBL.sorted.bed\"\n        if {[file exists $ENSEMBLfile]} {\n            foreach L [LinesFromFile $ENSEMBLfile] {\n                set Ls [split $L \"\\t\"]\n                set g_exist(ENSEMBL,[lindex $Ls 4]) 1\n            }\n        }\n    }\n    \n    if {[info exists g_exist(ENSEMBL,$geneName)]} {set test 1} else {set test 0}\n    \n    return $test\n}\n\n\n\n## - Check and create if necessary the \"promoter_XXXbp_*_GRCh*.sorted.bed\" file.\nproc checkPromoterFile {} {\n    \n    global g_AnnotSV\n    \n    ## Check if the promoters file has been formatted\n    #################################################\n    set g_AnnotSV(promAnn) 0\n    set genesDir \"$g_AnnotSV(annotationsDir)/Annotations_$g_AnnotSV(organism)/Genes/$g_AnnotSV(genomeBuild)\"\n    set regElementsDir \"$g_AnnotSV(annotationsDir)/Annotations_$g_AnnotSV(organism)/FtIncludedInSV/RegulatoryElements/$g_AnnotSV(genomeBuild)\"\n    \n    if {![file exists $regElementsDir]} {file mkdir $regElementsDir}\n    \n    set genesFileFormatted \"$genesDir/genes.$g_AnnotSV(tx).sorted.bed\"\n    set promoterFormatted \"$regElementsDir/promoter_$g_AnnotSV(promoterSize)bp_${g_AnnotSV(tx)}_$g_AnnotSV(genomeBuild).sorted.bed\"\n    \n    if {![file exists $promoterFormatted]} {\n        \n        # Creation of the promoterFormatted\n        puts \"\\t...$g_AnnotSV(tx) promoters configuration ([clock format [clock seconds] -format \"%B %d %Y - %H:%M\"])\"\n        puts \"\\t   (-promoterSize = $g_AnnotSV(promoterSize))\\n\"\n        foreach L [LinesFromFile $genesFileFormatted] {\n            # Line example:\n            # 1       17368   17436   -       MIR6859-2       NR_107062       17436   17436   17368,  17436,\n            set Ls [split $L \"\\t\"]\n            set chrom [lindex $Ls 0]\n            set strand [lindex $L 3]\n            if {$strand eq \"+\"} {\n                set promRight [lindex $Ls 1]\n                set promLeft [expr $promRight-$g_AnnotSV(promoterSize)]\n                if {$promLeft < 0} {set promLeft 0}\n            } elseif {$strand eq \"-\"} {\n                set promLeft [lindex $Ls 2]\n                set promRight [expr $promLeft+$g_AnnotSV(promoterSize)]\n            } else {\n                puts \"strand eq \\\"$strand\\\" -- $L\"\n            }\n            lappend genesProm($chrom\\t$promLeft\\t$promRight) [lindex $Ls 4]\n            lappend L_prom($chrom) \"$promLeft\\t$promRight\"\n        }\n        set L_allProm {}\n        foreach chrom {1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 X Y M MT} {\n            if {![info exists L_prom($chrom)]} {continue}\n            set L_prom($chrom) [lsort -command AscendingSortOnElement0 [lsort -command AscendingSortOnElement1 [lsort -unique $L_prom($chrom)]]]\n            foreach prom $L_prom($chrom) {\n                lappend L_allProm \"$chrom\\t$prom\\t${g_AnnotSV(tx)}_promoter\\t[join [lsort -unique $genesProm($chrom\\t$prom)] \";\"]\"\n            }\n        }\n        WriteTextInFile [join $L_allProm \"\\n\"] $promoterFormatted.tmp\n        # Sorting of the bedfile:\n        # Intersection with very large files can cause trouble with excessive memory usage.\n        # A presort of the bed files by chromosome and then by start position combined with the use of the -sorted option will invoke a memory-efficient algorithm.\n        set sortTmpFile \"$g_AnnotSV(outputDir)/[clock format [clock seconds] -format \"%Y%m%d-%H%M%S\"]_[pid]_sort.tmp.bash\"\n        ReplaceTextInFile \"#!/bin/bash\" $sortTmpFile\n        WriteTextInFile \"# The locale specified by the environment can affects the traditional sort order. We need to use native byte values.\" $sortTmpFile\n        WriteTextInFile \"export LC_ALL=C\" $sortTmpFile\n        WriteTextInFile \"sort -k1,1 -k2,2n $promoterFormatted.tmp > $promoterFormatted\" $sortTmpFile\n        file attributes $sortTmpFile -permissions 0755\n        if {[catch {eval exec bash $sortTmpFile} Message]} {\n            puts \"-- checkPromoterFile --\"\n            puts \"sort -k1,1 -k2,2n $promoterFormatted.tmp > $promoterFormatted\"\n            puts \"$Message\"\n            puts \"Exit with error\"\n            exit 2\n        }\n        file delete -force $sortTmpFile\n        file delete -force $promoterFormatted.tmp\n    }\n    set g_AnnotSV(promAnn) 1\n}\n\n\n##  EnhancerAtlas\n#################\n## - Check if some \"*_EP.txt\" files have been downloaded\n##\n## - Check and create if necessary:\n##   - EA_RefSeq_GRCh37.sorted.bed\n##   - EA_ENSEMBL_GRCh37.sorted.bed\n##\n## - The GRCh38 version should be manually created by lift over with the UCSC web server, sorted, and\n##   move in the “$ANNOTSV/share/AnnotSV/Annotations_Human/FtIncludedInSV/RegulatoryElements/GRCh38” directory.\nproc checkEAfiles {} {\n    \n    global g_AnnotSV\n    \n    \n    ## Check if EA files have been formatted\n    ########################################\n    set g_AnnotSV(EAann) 0\n    set extannDir \"$g_AnnotSV(annotationsDir)/Annotations_$g_AnnotSV(organism)\"\n    set regElementsDir \"$extannDir/FtIncludedInSV/RegulatoryElements\"\n    set EARefSeqFileFormattedGRCh37 \"$regElementsDir/$g_AnnotSV(genomeBuild)/EA_RefSeq_$g_AnnotSV(genomeBuild).sorted.bed\" ;# GRCh38 version should be manually created by lift over\n    set EAENSEMBLfileFormattedGRCh37 \"$regElementsDir/$g_AnnotSV(genomeBuild)/EA_ENSEMBL_$g_AnnotSV(genomeBuild).sorted.bed\" ;# GRCh38 version should be manually created by lift over\n    \n    set necessaryEAfile \"$regElementsDir/$g_AnnotSV(genomeBuild)/EA_${g_AnnotSV(tx)}_$g_AnnotSV(genomeBuild).sorted.bed\"\n    if {[file exists $necessaryEAfile]} {set g_AnnotSV(EAann) 1}\n    \n    if {[file exists $EARefSeqFileFormattedGRCh37] && [file exists $EAENSEMBLfileFormattedGRCh37]} {\n        return\n    }\n    \n    ###############################################\n    ## No formatted EA files available at this step\n    ###############################################\n    \n    ## Check if some EA files have been downloaded\n    ##############################################\n    set L_EAfiles [glob -nocomplain \"$regElementsDir/GRCh37/*_EP.txt\"] ;# only distributed in GRCh37\n    if {$L_EAfiles eq \"\"} {\n        return\n    }\n    \n    ## Downloaded EA files are available\n    ####################################\n    \n    # Line example:\n    # chr1:1252950-1254670_ENSG00000160087$UBE2J2$chr1$1209265$-      1.205829\n    #\n    # Format:\n    # For human, the data format in the file listed as \"A:B-C_D$E$F$G$H\tI\":\n    # A - Chromosome of enhancer.\n    # B - The starting position of enhancer.\n    # C - The ending position of enhancer.\n    # D - Gene ensembl ID.\n    # E - Gene ensembl Name.\n    # F - chromosome of gene.\n    # G - the position of the gene transcription start site.\n    # H - The strand of DNA the gene located.\n    # I - The predition score of the enhancer-gene interaction.\n    \n    puts \"\\t...EnhancerAtlas configuration ([clock format [clock seconds] -format \"%B %d %Y - %H:%M\"])\"\n    \n    ## Creation of EA_*_GRCh37.sorted.bed\n    ##########################################\n    ##   - # Header: chr EAstart EAend EAtype EAgene\n    \n    puts \"\\t\\t...creation of [file tail $EARefSeqFileFormattedGRCh37] and [file tail $EAENSEMBLfileFormattedGRCh37]\"\n    puts \"\\t\\t   (done only once)\"\n    puts \"\\t\\t   For GRCh38 use, please lift over these GRCh37 files to GRCh38\"\n    \n    file delete -force $EARefSeqFileFormattedGRCh37\n    file delete -force $EAENSEMBLfileFormattedGRCh37\n    \n    # Writings:\n    file delete -force $EARefSeqFileFormattedGRCh37.tmp\n    file delete -force $EAENSEMBLfileFormattedGRCh37.tmp\n    foreach EAfile $L_EAfiles {\n        foreach L [LinesFromFile $EAfile] {\n            if {[regexp \"chr(\\[0-9XYMT\\]+):(\\[0-9\\]+)-(\\[0-9\\]+)_\\[^\\\\\\$\\]+\\\\\\$(\\[^\\\\\\$\\]+)\" $L match chrom start end gene]} {\n                # RefSeq\n                if {[isARefSeqGeneName $gene]} {\n                    lappend L_coordRefSeq($chrom) \"$chrom\\t$start\\t$end\"\n                    lappend L_genesRefSeq($chrom\\t$start\\t$end) \"$gene\"\n                }\n                # ENSEMBL\n                if {[isAnENSEMBLgeneName $gene]} {\n                    lappend L_coordENSEMBL($chrom) \"$chrom\\t$start\\t$end\"\n                    lappend L_genesENSEMBL($chrom\\t$start\\t$end) \"$gene\"\n                }\n            }\n        }\n    }\n    foreach chrom {1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 X Y M MT} {\n        # RefSeq\n        if {[info exists L_coordRefSeq($chrom)]} {\n            set L_coordRefSeq($chrom) [lsort -command AscendingSortOnElement1 [lsort -command AscendingSortOnElement2 [lsort -unique $L_coordRefSeq($chrom)]]]\n            set L_linesToWriteGRCh37 {}\n            foreach coord $L_coordRefSeq($chrom) {\n                set L_genesRefSeq($coord) [lsort -unique $L_genesRefSeq($coord)]\n                lappend L_linesToWriteGRCh37 \"$coord\\tEA_enhancer\\t[join $L_genesRefSeq($coord) \";\"]\"\n            }\n            WriteTextInFile \"[join $L_linesToWriteGRCh37 \"\\n\"]\" $EARefSeqFileFormattedGRCh37.tmp\n        }\n        # ENSEMBL\n        if {[info exists L_coordENSEMBL($chrom)]} {\n            set L_coordENSEMBL($chrom) [lsort -command AscendingSortOnElement1 [lsort -command AscendingSortOnElement2 [lsort -unique $L_coordENSEMBL($chrom)]]]\n            set L_linesToWriteGRCh37 {}\n            foreach coord $L_coordENSEMBL($chrom) {\n                set L_genesENSEMBL($coord) [lsort -unique $L_genesENSEMBL($coord)]\n                lappend L_linesToWriteGRCh37 \"$coord\\tEA_enhancer\\t[join $L_genesENSEMBL($coord) \";\"]\"\n            }\n            WriteTextInFile \"[join $L_linesToWriteGRCh37 \"\\n\"]\" $EAENSEMBLfileFormattedGRCh37.tmp\n        }\n    }\n    \n    # Sorting of the bedfile:\n    # Intersection with very large files can cause trouble with excessive memory usage.\n    # A presort of the bed files by chromosome and then by start position combined with the use of the -sorted option will invoke a memory-efficient algorithm.\n    # RefSeq\n    set sortTmpFile \"$g_AnnotSV(outputDir)/[clock format [clock seconds] -format \"%Y%m%d-%H%M%S\"]_[pid]_sort.tmp.bash\"\n    ReplaceTextInFile \"#!/bin/bash\" $sortTmpFile\n    WriteTextInFile \"# The locale specified by the environment can affects the traditional sort order. We need to use native byte values.\" $sortTmpFile\n    WriteTextInFile \"export LC_ALL=C\" $sortTmpFile\n    WriteTextInFile \"sort -k1,1 -k2,2n $EARefSeqFileFormattedGRCh37.tmp >> $EARefSeqFileFormattedGRCh37\" $sortTmpFile\n    file attributes $sortTmpFile -permissions 0755\n    if {[catch {eval exec bash $sortTmpFile} Message]} {\n        puts \"-- checkEAfiles --\"\n        puts \"sort -k1,1 -k2,2n $EARefSeqFileFormattedGRCh37.tmp >> $EARefSeqFileFormattedGRCh37\"\n        puts \"$Message\"\n        puts \"Exit with error\"\n        exit 2\n    }\n    file delete -force $sortTmpFile\n    file delete -force $EARefSeqFileFormattedGRCh37.tmp\n    # ENSEMBL\n    set sortTmpFile \"$g_AnnotSV(outputDir)/[clock format [clock seconds] -format \"%Y%m%d-%H%M%S\"]_[pid]_sort.tmp.bash\"\n    ReplaceTextInFile \"#!/bin/bash\" $sortTmpFile\n    WriteTextInFile \"# The locale specified by the environment can affects the traditional sort order. We need to use native byte values.\" $sortTmpFile\n    WriteTextInFile \"export LC_ALL=C\" $sortTmpFile\n    WriteTextInFile \"sort -k1,1 -k2,2n $EAENSEMBLfileFormattedGRCh37.tmp >> $EAENSEMBLfileFormattedGRCh37\" $sortTmpFile\n    file attributes $sortTmpFile -permissions 0755\n    if {[catch {eval exec bash $sortTmpFile} Message]} {\n        puts \"-- checkEAfiles --\"\n        puts \"sort -k1,1 -k2,2n $EAENSEMBLfileFormattedGRCh37.tmp >> $EAENSEMBLfileFormattedGRCh37\"\n        puts \"$Message\"\n        puts \"Exit with error\"\n        exit 2\n    }\n    file delete -force $sortTmpFile\n    file delete -force $EAENSEMBLfileFormattedGRCh37.tmp\n    \n    # Delete the downloaded files\n    if {[file exists $EARefSeqFileFormattedGRCh37] && [file exists $EAENSEMBLfileFormattedGRCh37]} {\n        foreach EAfile $L_EAfiles {\n            file delete -force $EAfile\n        }\n    }\n    \n    set necessaryEAfile \"$regElementsDir/$g_AnnotSV(genomeBuild)/EA_${g_AnnotSV(tx)}_$g_AnnotSV(genomeBuild).sorted.bed\"\n    if {[file exists $necessaryEAfile]} {set g_AnnotSV(EAann) 1}\n}\n\n\n\n## - Check if the following GH files has been downloaded:\n##   - GeneHancer_elements.txt\n##   - GeneHancer_gene_associations_scores.txt\n##   - GeneHancer_hg19.txt\n##   Or:\n##   - GeneHancer_AnnotSV_elements_v5.25.txt\n##   - GeneHancer_AnnotSV_gene_associations_scores_v5.25.txt (association w/ or w/o \"s\")\n##   - GeneHancer_AnnotSV_hg19_v5.25.txt\n##\n## - Check and create if necessary:\n##   - GH_RefSeq_GRCh37.sorted.bed\n##   - GH_RefSeq_GRCh38.sorted.bed\n##   - GH_ENSEMBL_GRCh37.sorted.bed\n##   - GH_ENSEMBL_GRCh38.sorted.bed\nproc checkGHfiles {} {\n    \n    global g_AnnotSV\n    \n    \n    ## Check if GH files has been formatted\n    #######################################\n    set g_AnnotSV(GHann) 0\n    set extannDir \"$g_AnnotSV(annotationsDir)/Annotations_$g_AnnotSV(organism)\"\n    set regElementsDir \"$extannDir/FtIncludedInSV/RegulatoryElements\"\n    set GHRefSeqFileFormatted  \"$regElementsDir/$g_AnnotSV(genomeBuild)/GH_RefSeq_$g_AnnotSV(genomeBuild).sorted.bed\"\n    set GHENSEMBLfileFormatted \"$regElementsDir/$g_AnnotSV(genomeBuild)/GH_ENSEMBL_$g_AnnotSV(genomeBuild).sorted.bed\"\n    \n    if {[file exists $GHRefSeqFileFormatted] && [file exists $GHENSEMBLfileFormatted]} {\n        set g_AnnotSV(GHann) 1\n        return\n    }\n    \n    ###############################################\n    ## No formatted GH files available at this step\n    ###############################################\n    \n    ## Check if GH file has been downloaded and unzipped\n    ####################################################\n    # Checks if the unzipped GH files exist:\n    set GHelementsF [glob -no complain \"$regElementsDir/GeneHancer*elements*.txt\"] ;# GRCh38\n    set GHelementsF [expr {[llength $GHelementsF] > 0 ? [lindex $GHelementsF end] : \"no_file_exists\"}]\n    set GHassociationsF [glob -nocomplain \"$regElementsDir/GeneHancer*gene_association*_scores*.txt\"] ;# genes\n    set GHassociationsF [expr {[llength $GHassociationsF] > 0 ? [lindex $GHassociationsF end] : \"no_file_exists\"}]\n    set GHhg19F [glob -nocomplain \"$regElementsDir/GeneHancer*hg19*.txt\"] ;# GRCh37\n    set GHhg19F [expr {[llength $GHhg19F] > 0 ? [lindex $GHhg19F end] : \"no_file_exists\"}]\n    foreach GHfile \"$GHelementsF $GHassociationsF $GHhg19F\" {\n        if {![file exists $GHfile]} {\n            if {$g_AnnotSV(organism) eq \"Human\"} {\n                puts \"\\nWARNING: No GeneHancer annotations available.\"\n                puts \"(Please, see in the README file how to add these annotations. Users need to contact the GeneCards team.)\\n\"\n            }\n            return\n        }\n    }\n    \n    ## Downloaded GH files have been unzipped and are available\n    ###########################################################\n    puts \"\\t...GeneHancer configuration ([clock format [clock seconds] -format \"%B %d %Y - %H:%M\"])\"\n    \n    ## Creation of the 4 GH formatted files (RefSeq and ENSEMBL, GRCh37 and GRCh38)\n    ##   - # Header: chr GHstart GHend GHtype GHgene\n    set GHRefSeqFileFormatted37  \"$regElementsDir/GRCh37/GH_RefSeq_GRCh37.sorted.bed\"\n    set GHRefSeqFileFormatted38  \"$regElementsDir/GRCh38/GH_RefSeq_GRCh38.sorted.bed\"\n    set GHENSEMBLfileFormatted37 \"$regElementsDir/GRCh37/GH_ENSEMBL_GRCh37.sorted.bed\"\n    set GHENSEMBLfileFormatted38 \"$regElementsDir/GRCh38/GH_ENSEMBL_GRCh38.sorted.bed\"\n    \n    puts \"\\t\\t...creation of the 4 GH_*_GRCh3*.sorted.bed files\"\n    puts \"\\t\\t   (done only once)\"\n    \n    file delete -force $GHRefSeqFileFormatted37\n    file delete -force $GHRefSeqFileFormatted38\n    file delete -force $GHENSEMBLfileFormatted37\n    file delete -force $GHENSEMBLfileFormatted38\n    \n    # $GHelementsF (GRCh38)\n    # Header: chr element_start element_end GHid is_elite regulatory_element_type\n    foreach L [LinesFromFile $GHelementsF] {\n        set Ls [split $L \"\\t\"]\n        if {[regexp \"^chr\" $L]} {\n            set i_GHstart [lsearch -exact $Ls \"element_start\"]\n            set i_GHend [lsearch -exact $Ls \"element_end\"]\n            set i_GHid [lsearch -exact $Ls \"GHid\"]\n            set i_GHtype [lsearch -exact $Ls \"regulatory_element_type\"]\n            continue\n        }\n        regsub \"chr\" [lindex $Ls 0] \"\" chrom\n        set GHid [lindex $Ls $i_GHid]\n        lappend L_GHid($chrom) \"$GHid\"\n        \n        set GHstart [lindex $Ls $i_GHstart]\n        set GHend [lindex $Ls $i_GHend]\n        set coordGRCh38($GHid) \"$chrom\\t$GHstart\\t$GHend\"\n        regsub -all \"/\" [lindex $Ls $i_GHtype] \"_\" type($GHid)\n        regsub \"promoter_enhancer\" $type($GHid) \"enhancer\" type($GHid) ;# to simplify the annotation in the AnnotSV output \\\n        # (we don't want: \"RE=GH_enhancer+GH_promoter+GH_promoter_enhancer\" in the RE_gene output column)\n        set type($GHid) \"GH_[string tolower $type($GHid)]\"\n        set L_GHgene(RefSeq,$GHid) \"\" ;# initialisation before the next foreach\n        set L_GHgene(ENSEMBL,$GHid) \"\" ;# initialisation before the next foreach\n    }\n    \n    # $GHassociationsF => genes\n    # Header: GHid symbol combined_score is_elite\n    foreach L [LinesFromFile $GHassociationsF] {\n        set Ls [split $L \"\\t\"]\n        if {[regexp \"^GHid\" $L]} {\n            set i_GHid [lsearch -exact $Ls \"GHid\"]\n            set i_regulatedGene [lsearch -exact $Ls \"symbol\"]\n            continue\n        }\n        set GHid [lindex $Ls $i_GHid]\n        set gene [lindex $Ls $i_regulatedGene]\n        if {[isARefSeqGeneName $gene]} {\n            lappend L_GHgene(RefSeq,$GHid) $gene\n        }\n        if {[isAnENSEMBLgeneName $gene]} {\n            lappend L_GHgene(ENSEMBL,$GHid) $gene\n        }\n    }\n    \n    # $GHhg19F\n    # Header: chromosome start end GHid\n    foreach L [LinesFromFile $GHhg19F] {\n        set Ls [split $L \"\\t\"]\n        if {[regexp \"^chromosome\" $L]} {\n            set i_GHstart [lsearch -exact $Ls \"start\"]\n            set i_GHend [lsearch -exact $Ls \"end\"]\n            set i_GHid [lsearch -exact $Ls \"GHid\"]\n            continue\n        }\n        set GHid [lindex $Ls $i_GHid]\n        regsub \"chr\" [lindex $Ls 0] \"\" chrom\n        set GHstart [lindex $Ls $i_GHstart]\n        set GHend [lindex $Ls $i_GHend]\n        set coordGRCh37($GHid) \"$chrom\\t$GHstart\\t$GHend\"\n    }\n    \n    # Writings:\n    file delete -force $GHRefSeqFileFormatted37.tmp\n    file delete -force $GHRefSeqFileFormatted38.tmp\n    file delete -force $GHENSEMBLfileFormatted37.tmp\n    file delete -force $GHENSEMBLfileFormatted38.tmp\n    foreach chrom {1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 X Y M MT} {\n        if {![info exists L_GHid($chrom)]} {continue}\n        set L_linesToWriteRefSeqGRCh37 {}\n        set L_linesToWriteRefSeqGRCh38 {}\n        set L_linesToWriteENSEMBLGRCh37 {}\n        set L_linesToWriteENSEMBLGRCh38 {}\n        foreach GHid $L_GHid($chrom) {\n            # remove some enhancers (those for which no external identifiers are available, e.g. \"hsa-miR-1273e-082\")\n            ## Header: chr GHstart GHend GHtype GHgene\n            if {$L_GHgene(RefSeq,$GHid) ne \"\"} {\n                catch {lappend L_linesToWriteRefSeqGRCh37 \"$coordGRCh37($GHid)\\t$type($GHid)\\t[join $L_GHgene(RefSeq,$GHid) \";\"]\"}\n                catch {lappend L_linesToWriteRefSeqGRCh38 \"$coordGRCh38($GHid)\\t$type($GHid)\\t[join $L_GHgene(RefSeq,$GHid) \";\"]\"}\n            }\n            if {$L_GHgene(ENSEMBL,$GHid) ne \"\"} {\n                catch {lappend L_linesToWriteENSEMBLGRCh37 \"$coordGRCh37($GHid)\\t$type($GHid)\\t[join $L_GHgene(ENSEMBL,$GHid) \";\"]\"}\n                catch {lappend L_linesToWriteENSEMBLGRCh38 \"$coordGRCh38($GHid)\\t$type($GHid)\\t[join $L_GHgene(ENSEMBL,$GHid) \";\"]\"}\n            }\n        }\n        set L_linesToWriteRefSeqGRCh37 [lsort -command AscendingSortOnElement1 [lsort -command AscendingSortOnElement2 $L_linesToWriteRefSeqGRCh37]]\n        set L_linesToWriteRefSeqGRCh38 [lsort -command AscendingSortOnElement1 [lsort -command AscendingSortOnElement2 $L_linesToWriteRefSeqGRCh38]]\n        set L_linesToWriteENSEMBLGRCh37 [lsort -command AscendingSortOnElement1 [lsort -command AscendingSortOnElement2 $L_linesToWriteENSEMBLGRCh37]]\n        set L_linesToWriteENSEMBLGRCh38 [lsort -command AscendingSortOnElement1 [lsort -command AscendingSortOnElement2 $L_linesToWriteENSEMBLGRCh38]]\n        WriteTextInFile \"[join $L_linesToWriteRefSeqGRCh37 \"\\n\"]\" $GHRefSeqFileFormatted37.tmp\n        WriteTextInFile \"[join $L_linesToWriteRefSeqGRCh38 \"\\n\"]\" $GHRefSeqFileFormatted38.tmp\n        WriteTextInFile \"[join $L_linesToWriteENSEMBLGRCh37 \"\\n\"]\" $GHENSEMBLfileFormatted37.tmp\n        WriteTextInFile \"[join $L_linesToWriteENSEMBLGRCh38 \"\\n\"]\" $GHENSEMBLfileFormatted38.tmp\n    }\n    \n    # Sorting of the bedfile:\n    # Intersection with very large files can cause trouble with excessive memory usage.\n    # A presort of the bed files by chromosome and then by start position combined with the use of the -sorted option will invoke a memory-efficient algorithm.\n    foreach GHfile {GHRefSeqFileFormatted37 GHRefSeqFileFormatted38 GHENSEMBLfileFormatted37 GHENSEMBLfileFormatted38} {\n        set sortTmpFile \"$g_AnnotSV(outputDir)/[clock format [clock seconds] -format \"%Y%m%d-%H%M%S\"]_[pid]_sort.tmp.bash\"\n        ReplaceTextInFile \"#!/bin/bash\" $sortTmpFile\n        WriteTextInFile \"# The locale specified by the environment can affects the traditional sort order. We need to use native byte values.\" $sortTmpFile\n        WriteTextInFile \"export LC_ALL=C\" $sortTmpFile\n        WriteTextInFile \"sort -k1,1 -k2,2n [set $GHfile].tmp >> [set $GHfile]\" $sortTmpFile\n        file attributes $sortTmpFile -permissions 0755\n        if {[catch {eval exec bash $sortTmpFile} Message]} {\n            puts \"-- checkGHfiles --\"\n            puts \"sort -k1,1 -k2,2n [set $GHfile].tmp >> [set $GHfile]\"\n            puts \"$Message\"\n            puts \"Exit with error\"\n            exit 2\n        }\n        file delete -force $sortTmpFile\n        file delete -force [set $GHfile].tmp\n    }\n    \n    # Delete the downloaded files\n    if {[file exists $GHRefSeqFileFormatted37] && [file exists $GHRefSeqFileFormatted38] && [file exists $GHENSEMBLfileFormatted37] && [file exists $GHENSEMBLfileFormatted38]} {\n        foreach GHfile \"$GHelementsF $GHassociationsF $GHhg19F $regElementsDir/GeneHancer_tissues.txt $regElementsDir/ReadMe.txt\" {\n            file delete -force $GHfile\n        }\n    }\n    set g_AnnotSV(GHann) 1\n}\n\n\n\n\n## Human:\n#########\n## - Check if the following miRTargetLink files has been downloaded:\n##   - Validated_miRNA-gene_pairs_hsa_miRBase_v22.1_GRCh38_location_augmented.tsv\n##\n## - Check and create if necessary:\n##   - miRTargetLink_RefSeq_GRCh38.sorted.bed\n##   - miRTargetLink_ENSEMBL_GRCh38.sorted.bed\n##\n## - GRCh37 miRTargetLink are not provided (only GRCh38)\n##   - miRTargetLink_ENSEMBL_GRCh37.sorted.bed => created with a UCSC liftover\n##   - miRTargetLink_RefSeq_GRCh37.sorted.bed  => created with a UCSC liftover\n#\n## Mouse:\n#########\n## - Check if the following miRTargetLink files has been downloaded:\n##   - Validated_miRNA-gene_pairs_mmu_miRBase_v22.1_GRCm38_location_augmented.tsv\n##\n## - Check and create if necessary:\n##   - miRTargetLink_RefSeq_mm10.sorted.bed\n##\n## - mm9 miRTargetLink is not provided (only mm10)\n##   - miRTargetLink_RefSeq_mm9.sorted.bed  => created with a UCSC liftover\nproc checkMiRTargetLinkFiles {} {\n    \n    global g_AnnotSV\n    \n    set g_AnnotSV(miRNAann) 0\n    \n    ## Check if miRTargetLink files has been formatted\n    ##################################################\n    set extannDir \"$g_AnnotSV(annotationsDir)/Annotations_$g_AnnotSV(organism)\"\n    set regElementsDir \"$extannDir/FtIncludedInSV/RegulatoryElements\"\n    set miRNARefSeqFileFormatted  \"$regElementsDir/$g_AnnotSV(genomeBuild)/miRTargetLink_RefSeq_$g_AnnotSV(genomeBuild).sorted.bed\"\n    set miRNAENSEMBLfileFormatted \"$regElementsDir/$g_AnnotSV(genomeBuild)/miRTargetLink_ENSEMBL_$g_AnnotSV(genomeBuild).sorted.bed\"\n    if {$g_AnnotSV(organism) eq \"Human\"} {\n        if {[file exists $miRNARefSeqFileFormatted] && [file exists $miRNAENSEMBLfileFormatted]} {\n            set g_AnnotSV(miRNAann) 1\n            return\n        }\n    } elseif {$g_AnnotSV(organism) eq \"Mouse\"} {\n        if {[file exists $miRNARefSeqFileFormatted]} {\n            set g_AnnotSV(miRNAann) 1\n            return\n        }\n    }\n    \n    ##########################################################\n    ## No formatted miRTargetLink files available at this step\n    ##########################################################\n    \n    ## miRTargetLink is only available in GRCh38 and mm10\n    #####################################################\n    if {$g_AnnotSV(genomeBuild) ne \"GRCh38\" && $g_AnnotSV(genomeBuild) ne \"mm10\"} {\n        return\n    }\n    \n    ## Check if miRTargetLink file has been downloaded\n    ##################################################\n    # Checks if the miRTargetLink file exist:\n    # (we only keep the validated miRNA file. But the code is OK to also keep the predicted miRNA file if wanted)\n    if {$g_AnnotSV(genomeBuild) eq \"GRCh38\"} {\n        set miRNAfilesDownloaded [glob -nocomplain \"$regElementsDir/*_miRNA-gene_pairs_hsa_miRBase_*_GRCh38_location_augmented.tsv\"];# Validated (+ Predicted) miRNA files\n    } elseif {$g_AnnotSV(genomeBuild) eq \"mm10\"} {\n        set miRNAfilesDownloaded [glob -nocomplain \"$regElementsDir/*_miRNA-gene_pairs_mmu_miRBase_*_GRCm38_location_augmented.tsv\"];# Validated (+ Predicted) miRNA files\n    }\n    if {$miRNAfilesDownloaded eq \"\"} {\n        return\n    }\n    \n    ## Downloaded miRTargetLink file is available\n    #############################################\n    puts \"\\t...miRTargetLink configuration ([clock format [clock seconds] -format \"%B %d %Y - %H:%M\"])\"\n    \n    ## Creation of the 2 miRNA formatted files: RefSeq (GRCh38 + mm10)and ENSEMBL (GRCh38)\n    ##   - # Header: chr miRNAstart miRNAend miRNAtype miRNAgene\n    set miRNARefSeqFileFormatted38or10  \"$regElementsDir/$g_AnnotSV(genomeBuild)/miRTargetLink_RefSeq_$g_AnnotSV(genomeBuild).sorted.bed\"\n    set miRNAENSEMBLfileFormatted38     \"$regElementsDir/$g_AnnotSV(genomeBuild)/miRTargetLink_ENSEMBL_$g_AnnotSV(genomeBuild).sorted.bed\"\n    \n    puts \"\\t\\t...creation of the miRNA_*_$g_AnnotSV(genomeBuild).sorted.bed files\"\n    puts \"\\t\\t   (done only once)\"\n    \n    file delete -force $miRNARefSeqFileFormatted38or10\n    file delete -force $miRNAENSEMBLfileFormatted38\n    \n    # Validated_miRNA-gene_pairs_hsa_miRBase_v22.1_GRCh38_location_augmented.tsv:\n    #    seqnames  start          end             strand  ID              Alias           Name             species   target_gene     confidence\n    #    chr11     122146523      122146544       -       MIMAT0010195    MIMAT0010195    hsa-let-7a-2-3p  hsa       CADM1           Functional MTI (Weak)\n    #    chr11     122146523      122146544       -       MIMAT0010195    MIMAT0010195    hsa-let-7a-2-3p  hsa       ARID1A          Functional MTI (Weak)\n    # Validated_miRNA-gene_pairs_mmu_miRBase_v22.1_GRCm38_location_augmented.tsv\n    #    seqnames  start          end             strand  ID              Alias           Name            species    target_gene     confidence\n    #    chr13     48538239       48538260        -       MIMAT0000521    MIMAT0000521    mmu-let-7a-5p   mmu        Hoxa9           Functional MTI\n    #    chr13     48538239       48538260        -       MIMAT0000521    MIMAT0000521    mmu-let-7a-5p   mmu        Hmga2           Functional MTI\n    foreach miRNAfile $miRNAfilesDownloaded {   ;# Validated and predicted\n        foreach L [LinesFromFile $miRNAfile] {\n            set Ls [split $L \"\\t\"]\n            if {[regexp \"^seqnames\" $L]} {\n                set i_miRNAchrom [lsearch -exact $Ls \"seqnames\"]\n                set i_miRNAstart [lsearch -exact $Ls \"start\"]\n                set i_miRNAend   [lsearch -exact $Ls \"end\"]\n                set i_miRNAgene  [lsearch -exact $Ls \"target_gene\"]\n                continue\n            }\n            regsub \"chr\" [lindex $Ls $i_miRNAchrom] \"\" chrom\n            set miRNAstart [lindex $Ls $i_miRNAstart]\n            set miRNAend [lindex $Ls $i_miRNAend]\n            set coord \"$chrom\\t$miRNAstart\\t$miRNAend\"\n            lappend L_Genes($coord) [lindex $Ls $i_miRNAgene]\n            lappend L_coord($chrom) \"$coord\"\n        }\n    }\n    # Writings:\n    file delete -force $miRNARefSeqFileFormatted38or10.tmp\n    file delete -force $miRNAENSEMBLfileFormatted38.tmp\n    foreach chrom {1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 X Y M MT} {\n        if {![info exists L_coord($chrom)]} {continue}\n        set L_linesToWriteRefSeqGRCh38or10 {}\n        set L_linesToWriteENSEMBLGRCh38 {}\n        foreach coord [lsort -unique $L_coord($chrom)] {\n            set allRefSeqGenes \"\"\n            set allEnsemblGenes \"\"\n            foreach gene $L_Genes($coord) {\n                if {[isARefSeqGeneName $gene]} {\n                    lappend allRefSeqGenes $gene\n                }\n                if {[isAnENSEMBLgeneName $gene]} {\n                    lappend allEnsemblGenes $gene\n                }\n            }\n            if {$allRefSeqGenes ne \"\"} {lappend L_linesToWriteRefSeqGRCh38or10 \"$coord\\tmTL_miRNA\\t[join [lsort -unique $allRefSeqGenes] \";\"]\"}\n            if {$allEnsemblGenes ne \"\"} {lappend L_linesToWriteENSEMBLGRCh38 \"$coord\\tmTL_miRNA\\t[join [lsort -unique $allEnsemblGenes] \";\"]\"}\n        }\n        set L_linesToWriteRefSeqGRCh38or10 [lsort -command AscendingSortOnElement1 [lsort -command AscendingSortOnElement2 $L_linesToWriteRefSeqGRCh38or10]]\n        set L_linesToWriteENSEMBLGRCh38 [lsort -command AscendingSortOnElement1 [lsort -command AscendingSortOnElement2 $L_linesToWriteENSEMBLGRCh38]]\n        WriteTextInFile \"[join $L_linesToWriteRefSeqGRCh38or10 \"\\n\"]\" $miRNARefSeqFileFormatted38or10.tmp\n        if {$g_AnnotSV(genomeBuild) eq \"GRCh38\"} {\n            WriteTextInFile \"[join $L_linesToWriteENSEMBLGRCh38 \"\\n\"]\" $miRNAENSEMBLfileFormatted38.tmp\n        }\n    }\n    \n    # Sorting of the bedfile:\n    # Intersection with very large files can cause trouble with excessive memory usage.\n    # A presort of the bed files by chromosome and then by start position combined with the use of the -sorted option will invoke a memory-efficient algorithm.\n    foreach miRNAfile {miRNARefSeqFileFormatted38or10 miRNAENSEMBLfileFormatted38} {\n        if {![file exists [set $miRNAfile].tmp]} {continue} ;# use for Mouse annotation, ENSEMBL annotation doesn't exist\n        set sortTmpFile \"$g_AnnotSV(outputDir)/[clock format [clock seconds] -format \"%Y%m%d-%H%M%S\"]_[pid]_sort.tmp.bash\"\n        ReplaceTextInFile \"#!/bin/bash\" $sortTmpFile\n        WriteTextInFile \"# The locale specified by the environment can affects the traditional sort order. We need to use native byte values.\" $sortTmpFile\n        WriteTextInFile \"export LC_ALL=C\" $sortTmpFile\n        WriteTextInFile \"sort -k1,1 -k2,2n [set $miRNAfile].tmp >> [set $miRNAfile]\" $sortTmpFile\n        file attributes $sortTmpFile -permissions 0755\n        if {[catch {eval exec bash $sortTmpFile} Message]} {\n            puts \"-- checkMiRTargetLinkFiles --\"\n            puts \"sort -k1,1 -k2,2n [set $miRNAfile].tmp >> [set $miRNAfile]\"\n            puts \"$Message\"\n            puts \"Exit with error\"\n            exit 2\n        }\n        file delete -force $sortTmpFile\n        file delete -force [set $miRNAfile].tmp\n    }\n    \n    # Delete the downloaded files\n    foreach miRNAfile $miRNAfilesDownloaded {\n        file delete -force $miRNAfile\n    }\n    \n    set g_AnnotSV(miRNAann) 1\n}\n\n\n##  ABC\n#################\n## - Check if \"AllPredictions.AvgHiC.ABC0.015.minus150.ForABCPaperV3.txt.gz\" has been downloaded\n##\n## - Check and create if necessary:\n##   - ABC_RefSeq_GRCh37.sorted.bed\n##   - ABC_ENSEMBL_GRCh37.sorted.bed\n##\n## - The GRCh38 version should be manually created by lift over with the UCSC web server, sorted, and\n##   move in the “$ANNOTSV/share/AnnotSV/Annotations_Human/FtIncludedInSV/RegulatoryElements/GRCh38” directory.\nproc checkABCfiles {} {\n    \n    global g_AnnotSV\n    \n    \n    ## Check if ABC files have been formatted\n    ########################################\n    set g_AnnotSV(ABCann) 0\n    set extannDir \"$g_AnnotSV(annotationsDir)/Annotations_$g_AnnotSV(organism)\"\n    set regElementsDir \"$extannDir/FtIncludedInSV/RegulatoryElements\"\n    set necessaryABCfile \"$regElementsDir/$g_AnnotSV(genomeBuild)/ABC_${g_AnnotSV(tx)}_$g_AnnotSV(genomeBuild).sorted.bed\"\n    if {[file exists $necessaryABCfile]} {set g_AnnotSV(ABCann) 1}\n    \n    set ABCRefSeqFileFormattedGRCh37 \"$regElementsDir/GRCh37/ABC_RefSeq_GRCh37.sorted.bed\" ;# GRCh38 version should be manually created by lift over\n    set ABCENSEMBLfileFormattedGRCh37 \"$regElementsDir/GRCh37/ABC_ENSEMBL_GRCh37.sorted.bed\" ;# GRCh38 version should be manually created by lift over\n    if {[file exists $ABCRefSeqFileFormattedGRCh37] && [file exists $ABCENSEMBLfileFormattedGRCh37]} {\n        return\n    }\n    \n    ###############################################\n    ## No formatted ABC file available at this step\n    ###############################################\n    \n    ## Check if the ABC file has been downloaded\n    ############################################\n    set DownloadedABCfile \"$regElementsDir/GRCh37/AllPredictions.AvgHiC.ABC0.015.minus150.ForABCPaperV3.txt.gz\" ;# only distributed in GRCh37\n    if {![file exists $DownloadedABCfile]} {\n        return\n    }\n    \n    ## Downloaded ABC file is available\n    ###################################\n    # Line example:\n    # chr1    710010  710210  genic|chr1:709860-710360        genic   0.420794        LOC100288069    714068  NA      0.815301        True    3958    False   0.125372        0.125372        0.123436        0.123436      0.001216 0.124652        0.052453        0.025955        0.051941        0.021762        brite_adipose-Loft2014\n    #\n    # Format:\n    # 1. chr: enhancer chromosome (eg chr1)\n    # 2. start: enhancer start position (eg 710010)\n    # 3. end: enhancer end position (eg 710210)\n    # 4. name: enhancer name made of its class and its initial (before size normalization) coordinates (eg genic|chr1:709860-710360)\n    # 5. class: enhancer class, i.e. position with respect to genes (eg genic)\n    # 6. activity_base: geometric mean DHS (or ATAC) and H3K27ac. This is the Activity used in the ABC Score (eg 0.420794)\n    # 7. TargetGene: enhancer target gene (eg LOC100288069)\n    # 8. TargetGeneTSS: enhancer target gene TSS position (eg 714068)\n    # 9. TargetGeneExpression: enhancer target gene expression (eg NA if no gene expression but the activity of the gene promoter was used)\n    # 10. TargetGenePromoterActivityQuantile: quantile of Activity at Promoter of target gene (eg 0.815301)\n    # 11. TargetGeneIsExpressed: whether enhancer target gene is expressed (eg True)\n    # 12. distance: distance in bp between enhancer and TSS of target gene (eg 3958)\n    # 13. isSelfPromoter: boolean denoting whether element is the promoter of the TargetGene (eg False)\n    # 14. hic_contact: K-R normalized Hi-C contacts between element and TargetGene TSS (eg 0.125372)\n    # 15. powerlaw_contact: contact between enhancer and gene predicted by power law in the cell type (eg 0.125372)\n    # 16. powerlaw_contact_reference: contact between enhancer and gene predicted by power law in K562 (eg 0.123436)\n    # 17. hic_contact_pl_scaled: hic_contact scaled by the difference in powerlaw fits between target cell type and reference cell type (eg 0.123436)\n    # 18. hic_pseudocount: pseudocount added to HiC Contact (eg 0.001216)\n    # 19. hic_contact_pl_scaled_adj: powerlaw scaled KR Normalized HiC plus pseudocount. This is the Contact used in the ABC Score (eg 0.124652)\n    # 20. ABC.Score.Numerator: the numator of the ABC Score. Activity x Contact without dividing by the scores for other elements near the Target Gene (eg 0.052453)\n    # 21. ABC.Score: ABC Score for the enhancer/gene relationship in this cell type (eg 0.025955)\n    # 22. powerlaw.Score.Numerator: power law score numerator (eg 0.051941)\n    # 23. powerlaw.Score: power law score (eg 0.021762)\n    # 24. CellType: cell type where the enhancer/gene relationship is seen (eg brite_adipose-Loft2014)\n    \n    puts \"\\t...ABC configuration ([clock format [clock seconds] -format \"%B %d %Y - %H:%M\"])\"\n    \n    ## Creation of ABC_*_GRCh37.sorted.bed\n    ##########################################\n    ##   - # Header: chr ABCstart ABCend ABCtype ABCgenes\n    \n    puts \"\\t\\t...creation of [file tail $ABCRefSeqFileFormattedGRCh37] and [file tail $ABCENSEMBLfileFormattedGRCh37]\"\n    puts \"\\t\\t   (done only once)\"\n    puts \"\\t\\t   For GRCh38 use, please lift over these GRCh37 files to GRCh38\"\n    \n    file delete -force $ABCRefSeqFileFormattedGRCh37\n    file delete -force $ABCENSEMBLfileFormattedGRCh37\n    \n    # Writings:\n    file delete -force $ABCRefSeqFileFormattedGRCh37.tmp\n    file delete -force $ABCENSEMBLfileFormattedGRCh37.tmp\n    \n    set f [open \"| gzip -cd $DownloadedABCfile\"]\n    while {! [eof $f]} {\n        set L [gets $f]\n        set Ls [split $L \"\\t\"]\n        if {[regexp \"^chr\\t\" $L]} {\n            set i_start [lsearch -exact $Ls \"start\"]\n            set i_end [lsearch -exact $Ls \"end\"]\n            set i_gene [lsearch -exact $Ls \"TargetGene\"]\n            continue\n        }\n        regsub \"chr\" [lindex $Ls 0] \"\" chrom\n        set start [lindex $Ls $i_start]\n        set end [lindex $Ls $i_end]\n        set gene [lindex $Ls $i_gene]\n        # RefSeq\n        if {[isARefSeqGeneName $gene]} {\n            lappend L_coordRefSeq($chrom) \"$chrom\\t$start\\t$end\"\n            lappend L_genesRefSeq($chrom\\t$start\\t$end) \"$gene\"\n        }\n        # ENSEMBL\n        if {[isAnENSEMBLgeneName $gene]} {\n            lappend L_coordENSEMBL($chrom) \"$chrom\\t$start\\t$end\"\n            lappend L_genesENSEMBL($chrom\\t$start\\t$end) \"$gene\"\n        }\n    }\n    foreach chrom {1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 X Y M MT} {\n        # RefSeq\n        if {[info exists L_coordRefSeq($chrom)]} {\n            set L_coordRefSeq($chrom) [lsort -command AscendingSortOnElement1 [lsort -command AscendingSortOnElement2 [lsort -unique $L_coordRefSeq($chrom)]]]\n            set L_linesToWriteGRCh37 {}\n            foreach coord $L_coordRefSeq($chrom) {\n                set L_genesRefSeq($coord) [lsort -unique $L_genesRefSeq($coord)]\n                lappend L_linesToWriteGRCh37 \"$coord\\tABC_enhancer\\t[join $L_genesRefSeq($coord) \";\"]\"\n            }\n            WriteTextInFile \"[join $L_linesToWriteGRCh37 \"\\n\"]\" $ABCRefSeqFileFormattedGRCh37.tmp\n        }\n        # ENSEMBL\n        if {[info exists L_coordENSEMBL($chrom)]} {\n            set L_coordENSEMBL($chrom) [lsort -command AscendingSortOnElement1 [lsort -command AscendingSortOnElement2 [lsort -unique $L_coordENSEMBL($chrom)]]]\n            set L_linesToWriteGRCh37 {}\n            foreach coord $L_coordENSEMBL($chrom) {\n                set L_genesENSEMBL($coord) [lsort -unique $L_genesENSEMBL($coord)]\n                lappend L_linesToWriteGRCh37 \"$coord\\tABC_enhancer\\t[join $L_genesENSEMBL($coord) \";\"]\"\n            }\n            WriteTextInFile \"[join $L_linesToWriteGRCh37 \"\\n\"]\" $ABCENSEMBLfileFormattedGRCh37.tmp\n        }\n    }\n    \n    # Sorting of the bedfile:\n    # Intersection with very large files can cause trouble with excessive memory usage.\n    # A presort of the bed files by chromosome and then by start position combined with the use of the -sorted option will invoke a memory-efficient algorithm.\n    # RefSeq\n    set sortTmpFile \"$g_AnnotSV(outputDir)/[clock format [clock seconds] -format \"%Y%m%d-%H%M%S\"]_[pid]_sort.tmp.bash\"\n    ReplaceTextInFile \"#!/bin/bash\" $sortTmpFile\n    WriteTextInFile \"# The locale specified by the environment can affects the traditional sort order. We need to use native byte values.\" $sortTmpFile\n    WriteTextInFile \"export LC_ALL=C\" $sortTmpFile\n    WriteTextInFile \"sort -k1,1 -k2,2n $ABCRefSeqFileFormattedGRCh37.tmp >> $ABCRefSeqFileFormattedGRCh37\" $sortTmpFile\n    file attributes $sortTmpFile -permissions 0755\n    if {[catch {eval exec bash $sortTmpFile} Message]} {\n        puts \"-- checkABCfiles --\"\n        puts \"sort -k1,1 -k2,2n $ABCRefSeqFileFormattedGRCh37.tmp >> $ABCRefSeqFileFormattedGRCh37\"\n        puts \"$Message\"\n        puts \"Exit with error\"\n        exit 2\n    }\n    file delete -force $sortTmpFile\n    file delete -force $ABCRefSeqFileFormattedGRCh37.tmp\n    # ENSEMBL\n    set sortTmpFile \"$g_AnnotSV(outputDir)/[clock format [clock seconds] -format \"%Y%m%d-%H%M%S\"]_[pid]_sort.tmp.bash\"\n    ReplaceTextInFile \"#!/bin/bash\" $sortTmpFile\n    WriteTextInFile \"# The locale specified by the environment can affects the traditional sort order. We need to use native byte values.\" $sortTmpFile\n    WriteTextInFile \"export LC_ALL=C\" $sortTmpFile\n    WriteTextInFile \"sort -k1,1 -k2,2n $ABCENSEMBLfileFormattedGRCh37.tmp >> $ABCENSEMBLfileFormattedGRCh37\" $sortTmpFile\n    file attributes $sortTmpFile -permissions 0755\n    if {[catch {eval exec bash $sortTmpFile} Message]} {\n        puts \"-- checkABCfiles --\"\n        puts \"sort -k1,1 -k2,2n $ABCENSEMBLfileFormattedGRCh37.tmp >> $ABCENSEMBLfileFormattedGRCh37\"\n        puts \"$Message\"\n        puts \"Exit with error\"\n        exit 2\n    }\n    file delete -force $sortTmpFile\n    file delete -force $ABCENSEMBLfileFormattedGRCh37.tmp\n    \n    # Delete the downloaded files\n    if {[file exists $ABCRefSeqFileFormattedGRCh37] && [file exists $ABCENSEMBLfileFormattedGRCh37]} {\n        file delete -force $DownloadedABCfile\n    }\n    \n    set necessaryABCfile \"$regElementsDir/$g_AnnotSV(genomeBuild)/ABC_${g_AnnotSV(tx)}_$g_AnnotSV(genomeBuild).sorted.bed\"\n    if {[file exists $necessaryABCfile]} {set g_AnnotSV(ABCann) 1}\n}\n\n\n\n##  MPRA\n#################\n## - Check if \"MPRA_promoters.tsv\" and \"MPRA_enhancers.tsv\" have been copy/paste\n##   (https://kircherlab.bihealth.org/satMutMPRA)\n##\n## - Check and create if necessary:\n##   - MPRA_RefSeq_GRCh37.sorted.bed\n##   - MPRA_ENSEMBL_GRCh37.sorted.bed\n##   - MPRA_RefSeq_GRCh38.sorted.bed\n##   - MPRA_ENSEMBL_GRCh38.sorted.bed\nproc checkMPRAfiles {} {\n    \n    global g_AnnotSV\n    \n    \n    ## Check if MPRA files have been formatted\n    ########################################\n    set g_AnnotSV(MPRAann) 0\n    set extannDir \"$g_AnnotSV(annotationsDir)/Annotations_$g_AnnotSV(organism)\"\n    set regElementsDir \"$extannDir/FtIncludedInSV/RegulatoryElements\"\n    set necessaryMPRAfile \"$regElementsDir/$g_AnnotSV(genomeBuild)/MPRA_${g_AnnotSV(tx)}_$g_AnnotSV(genomeBuild).sorted.bed\"\n    if {[file exists $necessaryMPRAfile]} {set g_AnnotSV(MPRAann) 1; return}\n    \n    set MPRARefSeqFileFormattedGRCh37 \"$regElementsDir/GRCh37/MPRA_RefSeq_GRCh37.sorted.bed\"\n    set MPRAENSEMBLfileFormattedGRCh37 \"$regElementsDir/GRCh37/MPRA_ENSEMBL_GRCh37.sorted.bed\"\n    set MPRARefSeqFileFormattedGRCh38 \"$regElementsDir/GRCh38/MPRA_RefSeq_GRCh38.sorted.bed\"\n    set MPRAENSEMBLfileFormattedGRCh38 \"$regElementsDir/GRCh38/MPRA_ENSEMBL_GRCh38.sorted.bed\"\n    if {[file exists $MPRARefSeqFileFormattedGRCh37] && [file exists $MPRAENSEMBLfileFormattedGRCh37] && [file exists $MPRARefSeqFileFormattedGRCh38] && [file exists $MPRAENSEMBLfileFormattedGRCh38]} {\n        return\n    }\n    \n    ###############################################\n    ## No formatted MPRA file available at this step\n    ###############################################\n    \n    ## Check if the MPRA files have been downloaded\n    ###############################################\n    set DownloadedMPRAfile_promoters \"$regElementsDir/MPRA_promoters.tsv\" ;# Distributed with GRCh37/GRCh38 coordinates in the same file\n    set DownloadedMPRAfile_enhancers \"$regElementsDir/MPRA_enhancers.tsv\" ;# Distributed with GRCh37/GRCh38 coordinates in the same file\n    if {![file exists $DownloadedMPRAfile_promoters] || ![file exists $DownloadedMPRAfile_enhancers]} {\n        return\n    }\n    \n    ## Downloaded MPRA file is available\n    ###################################\n    ## MPRA_enhancers.tsv format:\n    #  Name    Genomic coordinates (GRCh37)    Genomic coordinates (GRCh38)    Transcript      Associated Phenotype    Luciferase vector       MPRA vector     Cell line\t...\n    ## MPRA_enhancers.tsv format:\n    #  Name    Genomic coordinates (GRCh37)    Genomic coordinates (GRCh38)    Associated Phenotype    Luciferase vector       MPRA vector     Cell line       Transf. time (hr)\t\t...\n    \n    puts \"\\t...MPRA configuration ([clock format [clock seconds] -format \"%B %d %Y - %H:%M\"])\"\n    \n    ## Creation of MPRA_*_*.sorted.bed\n    ##########################################\n    # Header: chr MPRAstart MPRAend MPRAtype MPRAgenes\n    \n    puts \"\\t\\t...creation of [file tail $MPRARefSeqFileFormattedGRCh37], [file tail $MPRAENSEMBLfileFormattedGRCh37], [file tail $MPRARefSeqFileFormattedGRCh38] and [file tail $MPRAENSEMBLfileFormattedGRCh38]\"\n    puts \"\\t\\t   (done only once)\"\n    \n    file delete -force $MPRARefSeqFileFormattedGRCh37\n    file delete -force $MPRAENSEMBLfileFormattedGRCh37\n    file delete -force $MPRARefSeqFileFormattedGRCh38\n    file delete -force $MPRAENSEMBLfileFormattedGRCh38\n    \n    # Writings:\n    file delete -force $MPRARefSeqFileFormattedGRCh37.tmp\n    file delete -force $MPRAENSEMBLfileFormattedGRCh37.tmp\n    file delete -force $MPRARefSeqFileFormattedGRCh38.tmp\n    file delete -force $MPRAENSEMBLfileFormattedGRCh38.tmp\n    \n    set L_toParse [LinesFromFile $DownloadedMPRAfile_promoters]\n    lappend L_toParse {*}[LinesFromFile $DownloadedMPRAfile_enhancers]\n    \n    foreach L $L_toParse {\n        set Ls [split $L \"\\t\"]\n        if {[regexp \"^Name\\t\" $L]} {\n            set i_coord37 [lsearch -exact $Ls \"Genomic coordinates (GRCh37)\"] ; #e.g. \"chrX:138,612,622-138,612,924\"\n            set i_coord38 [lsearch -exact $Ls \"Genomic coordinates (GRCh38)\"]\n            if {[regexp \"Transcript\" $L]} {\n                set MPRAtype \"MPRA_promoter\"\n            } else {\n                set MPRAtype \"MPRA_enhancer\"\n            }\n            continue\n        }\n        regsub -all \",\" [lindex $Ls $i_coord37] \"\" coord37\n        regsub -all \",\" [lindex $Ls $i_coord38] \"\" coord38\n        if {![regexp \"chr(\\[0-9XYMT\\]+):(\\[0-9\\]+)-(\\[0-9\\]+)\" $coord37 match chrom37 start37 end37]} {\n            puts \"Bad format in $DownloadedMPRAfile_promoters\"\n            puts \"$L\"\n            puts \"Check this format.\"\n        }\n        if {![regexp \"chr(\\[0-9XYMT\\]+):(\\[0-9\\]+)-(\\[0-9\\]+)\" $coord38 match chrom38 start38 end38]} {\n            puts \"Bad format in $DownloadedMPRAfile_promoters\"\n            puts \"$L\"\n            puts \"Check this format.\"\n        }\n        set gene [lindex $Ls 0]\n        regsub \" \\\\(.+|\\\\+.+\" $gene \"\" gene\n        \n        set type($chrom37\\t$start37\\t$end37) \"$MPRAtype\"\n        set type($chrom38\\t$start38\\t$end38) \"$MPRAtype\"\n        # RefSeq\n        if {[isARefSeqGeneName $gene]} {\n            lappend L_coordRefSeq37($chrom37) \"$chrom37\\t$start37\\t$end37\"\n            lappend L_genesRefSeq37($chrom37\\t$start37\\t$end37) \"$gene\"\n            lappend L_coordRefSeq38($chrom38) \"$chrom38\\t$start38\\t$end38\"\n            lappend L_genesRefSeq38($chrom38\\t$start38\\t$end38) \"$gene\"\n        }\n        # ENSEMBL\n        if {[isAnENSEMBLgeneName $gene]} {\n            lappend L_coordENSEMBL37($chrom37) \"$chrom37\\t$start37\\t$end37\"\n            lappend L_genesENSEMBL37($chrom37\\t$start37\\t$end37) \"$gene\"\n            lappend L_coordENSEMBL38($chrom38) \"$chrom38\\t$start38\\t$end38\"\n            lappend L_genesENSEMBL38($chrom38\\t$start38\\t$end38) \"$gene\"\n        }\n    }\n    foreach chrom {1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 X Y M MT} {\n        foreach build {\"37\" \"38\"} {\n            # RefSeq\n            if {[info exists L_coordRefSeq[set build]($chrom)]} {\n                set L_coordRefSeq[set build]($chrom) [lsort -command AscendingSortOnElement1 [lsort -command AscendingSortOnElement2 [lsort -unique [set L_coordRefSeq[set build]($chrom)]]]]\n                set L_linesToWrite[set build] {}\n                foreach coord [set L_coordRefSeq[set build]($chrom)] {\n                    set L_genesRefSeq[set build]($coord) [lsort -unique [set L_genesRefSeq[set build]($coord)]]\n                    lappend L_linesToWrite[set build] \"$coord\\t$type($coord)\\t[join [set L_genesRefSeq[set build]($coord)] \";\"]\"\n                }\n                WriteTextInFile \"[join [set L_linesToWrite[set build]] \"\\n\"]\" [set MPRARefSeqFileFormattedGRCh[set build]].tmp\n            }\n            # ENSEMBL\n            if {[info exists L_coordENSEMBL[set build]($chrom)]} {\n                set L_coordENSEMBL[set build]($chrom) [lsort -command AscendingSortOnElement1 [lsort -command AscendingSortOnElement2 [lsort -unique [set L_coordENSEMBL[set build]($chrom)]]]]\n                set L_linesToWrite[set build] {}\n                foreach coord [set L_coordENSEMBL[set build]($chrom)] {\n                    set L_genesENSEMBL[set build]($coord) [lsort -unique [set L_genesENSEMBL[set build]($coord)]]\n                    lappend L_linesToWrite[set build] \"$coord\\t$type($coord)\\t[join [set L_genesENSEMBL[set build]($coord)] \";\"]\"\n                }\n                WriteTextInFile \"[join [set L_linesToWrite[set build]] \"\\n\"]\" [set MPRAENSEMBLfileFormattedGRCh[set build]].tmp\n            }\n        }\n    }\n    \n    \n    foreach build {\"37\" \"38\"} {\n        # Sorting of the bedfile:\n        # Intersection with very large files can cause trouble with excessive memory usage.\n        # A presort of the bed files by chromosome and then by start position combined with the use of the -sorted option will invoke a memory-efficient algorithm.\n        # RefSeq\n        set sortTmpFile \"$g_AnnotSV(outputDir)/[clock format [clock seconds] -format \"%Y%m%d-%H%M%S\"]_[pid]_sort.tmp.bash\"\n        ReplaceTextInFile \"#!/bin/bash\" $sortTmpFile\n        WriteTextInFile \"# The locale specified by the environment can affects the traditional sort order. We need to use native byte values.\" $sortTmpFile\n        WriteTextInFile \"export LC_ALL=C\" $sortTmpFile\n        WriteTextInFile \"sort -k1,1 -k2,2n [set MPRARefSeqFileFormattedGRCh[set build]].tmp >> [set MPRARefSeqFileFormattedGRCh[set build]]\" $sortTmpFile\n        file attributes $sortTmpFile -permissions 0755\n        if {[catch {eval exec bash $sortTmpFile} Message]} {\n            puts \"-- checkMPRAfiles --\"\n            puts \"sort -k1,1 -k2,2n [set MPRARefSeqFileFormattedGRCh[set build]].tmp >> [set MPRARefSeqFileFormattedGRCh[set build]]\"\n            puts \"$Message\"\n            puts \"Exit with error\"\n            exit 2\n        }\n        file delete -force $sortTmpFile\n        file delete -force [set MPRARefSeqFileFormattedGRCh[set build]].tmp\n        # ENSEMBL\n        set sortTmpFile \"$g_AnnotSV(outputDir)/[clock format [clock seconds] -format \"%Y%m%d-%H%M%S\"]_[pid]_sort.tmp.bash\"\n        ReplaceTextInFile \"#!/bin/bash\" $sortTmpFile\n        WriteTextInFile \"# The locale specified by the environment can affects the traditional sort order. We need to use native byte values.\" $sortTmpFile\n        WriteTextInFile \"export LC_ALL=C\" $sortTmpFile\n        WriteTextInFile \"sort -k1,1 -k2,2n [set MPRAENSEMBLfileFormattedGRCh[set build]].tmp >> [set MPRAENSEMBLfileFormattedGRCh[set build]]\" $sortTmpFile\n        file attributes $sortTmpFile -permissions 0755\n        if {[catch {eval exec bash $sortTmpFile} Message]} {\n            puts \"-- checkMPRAfiles --\"\n            puts \"sort -k1,1 -k2,2n [set MPRAENSEMBLfileFormattedGRCh[set build]].tmp >> [set MPRAENSEMBLfileFormattedGRCh[set build]]\"\n            puts \"$Message\"\n            puts \"Exit with error\"\n            exit 2\n        }\n        file delete -force $sortTmpFile\n        file delete -force [set MPRAENSEMBLfileFormattedGRCh[set build]].tmp\n    }\n    \n    \n    # Delete the downloaded files\n    if {[file exists $MPRARefSeqFileFormattedGRCh37] && [file exists $MPRAENSEMBLfileFormattedGRCh37] && [file exists $MPRARefSeqFileFormattedGRCh38] && [file exists $MPRAENSEMBLfileFormattedGRCh38]} {\n        file delete -force $DownloadedMPRAfile_promoters\n        file delete -force $DownloadedMPRAfile_enhancers\n    }\n    \n    set necessaryMPRAfile \"$regElementsDir/$g_AnnotSV(genomeBuild)/MPRA_${g_AnnotSV(tx)}_$g_AnnotSV(genomeBuild).sorted.bed\"\n    if {[file exists $necessaryMPRAfile]} {set g_AnnotSV(MPRAann) 1}\n}\n\n\n\n\n\n##################################################################################################################\n##################################################################################################################\n##################################################################################################################\n\n\n\n\n## Annotate the SV bedFile with the regulatory elements files\n## Creation of the g_re global variable\nproc regulatoryElementsAnnotation {L_allGenesOverlapped} {\n    \n    global g_AnnotSV\n    global g_re\n    global g_genesReg\n    global g_HI\n    global g_TS\n    global g_reDB\n    \n    # Intersect of the input SV bedfile with the regulatory elements files\n    ######################################################################\n    ## Sorted SV bed file: $g_AnnotSV(bedFile)\n    regsub \"(.annotated)?.tsv$\" $g_AnnotSV(outputDir)/$g_AnnotSV(outputFile) \".SV_RE_intersect.tmp\" SV_RE_intersectBEDfile\n    file delete -force $SV_RE_intersectBEDfile\n    \n    set extannDir \"$g_AnnotSV(annotationsDir)/Annotations_$g_AnnotSV(organism)\"\n    set regElementsDir \"$extannDir/FtIncludedInSV/RegulatoryElements/$g_AnnotSV(genomeBuild)\"\n    set L_REfiles {}\n    lappend L_REfiles \"$regElementsDir/EA_${g_AnnotSV(tx)}_$g_AnnotSV(genomeBuild).sorted.bed\"     ;#EnhancerAtlas\n    lappend L_REfiles \"$regElementsDir/GH_${g_AnnotSV(tx)}_$g_AnnotSV(genomeBuild).sorted.bed\"     ;#GeneHancer\n    lappend L_REfiles \"$regElementsDir/promoter_${g_AnnotSV(promoterSize)}bp_${g_AnnotSV(tx)}_$g_AnnotSV(genomeBuild).sorted.bed\" ;# promoter\n    lappend L_REfiles \"$regElementsDir/miRTargetLink_${g_AnnotSV(tx)}_$g_AnnotSV(genomeBuild).sorted.bed\"     ;#miRTargetLink\n    lappend L_REfiles \"$regElementsDir/ABC_${g_AnnotSV(tx)}_$g_AnnotSV(genomeBuild).sorted.bed\"; #Activity-by-Contact (ABC) Model data\n    lappend L_REfiles \"$regElementsDir/MPRA_${g_AnnotSV(tx)}_$g_AnnotSV(genomeBuild).sorted.bed\"; #Massive parallel reporter assays (MPRA) data (Kircher lab)\n    foreach reFile $L_REfiles {\n        if {![file exists $reFile]} {continue}\n        if {[catch {exec $g_AnnotSV(bedtools) intersect -sorted -a $g_AnnotSV(bedFile) -b $reFile -wa -wb >> $SV_RE_intersectBEDfile} Message]} {\n            if {[catch {exec $g_AnnotSV(bedtools) intersect -a $g_AnnotSV(bedFile) -b $reFile -wa -wb >> $SV_RE_intersectBEDfile} Message]} {\n                puts \"-- regulatoryElementsAnnotation --\"\n                puts \"$g_AnnotSV(bedtools) intersect -sorted -a $g_AnnotSV(bedFile) -b $reFile -wa -wb >> $SV_RE_intersectBEDfile\"\n                puts \"$Message\"\n                puts \"Exit with error\"\n                exit 2\n            }\n        }\n    }\n    \n    # Definition of the g_genesReg($SVfromBED) variable (list all the regulated genes impacted by 1 SV)\n    ###################################################################################################\n    set L_allRegulatedGenes {} ;# used for exomiser\n    if {![file exists $SV_RE_intersectBEDfile ] || [file size $SV_RE_intersectBEDfile] eq 0} {\n        # No intersection between SV and regulatory elements\n        ## Delete temporary file\n        file delete -force $SV_RE_intersectBEDfile\n    } else {\n        set f [open \"$SV_RE_intersectBEDfile\"]\n        while {! [eof $f]} {\n            set L [gets $f]\n            set Ls [split $L \"\\t\"]\n            # SVfromBED (\"chrom\\tstart\\tend\")\n            set SVfromBED \"[join [lrange $Ls 0 2] \"\\t\"]\"\n            set L_genesFromTheLine [split [lindex $Ls end] \";\"]\n            lappend g_genesReg($SVfromBED) {*}$L_genesFromTheLine ;# regulated genes\n            lappend L_allRegulatedGenes {*}$L_genesFromTheLine\n            set db [lindex $Ls end-1]\n            foreach g $L_genesFromTheLine {\n                lappend g_reDB($SVfromBED,$g) $db\n            }\n        }\n        close $f\n        foreach SV [array names g_genesReg] {\n            set g_genesReg($SV) [lsort -unique $g_genesReg($SV)]\n        }\n        foreach key [array names g_reDB] {\n            set g_reDB($key) [lsort -unique $g_reDB($key)]\n        }\n        \n        ## Delete temporary file\n        if {$g_AnnotSV(REreport)} {\n            regsub \"(.annotated)?.tsv$\" $g_AnnotSV(outputDir)/$g_AnnotSV(outputFile) \".SV_RE_intersect.report\" permanentSV_RE_intersectBEDfile\n            file delete -force $permanentSV_RE_intersectBEDfile\n            file rename $SV_RE_intersectBEDfile $permanentSV_RE_intersectBEDfile\n        } else {\n            file delete -force $SV_RE_intersectBEDfile\n        }\n    }\n    \n    ## Display\n    ##########\n    puts \"...searching for SV overlaps with a gene or a regulatory elements\"\n    puts \"\\t...[llength $L_allGenesOverlapped] genes overlapped with an SV\"\n    set L_allRegulatedGenes [lsort -unique $L_allRegulatedGenes]\n    puts \"\\t...[llength $L_allRegulatedGenes] genes regulated by a regulatory element which is overlapped with an SV\\n\"\n    \n    ## Preparation of the phenotype-driven analysis (PhenoGenius + Exomiser)\n    ## (to be able to access to the exomiser score of a gene with [ExomiserAnnotation $gName \"score\"])\n    ## (to be able to access to the PhenoGenius specificity of a gene with [PhenoGeniusCliAnnotation $gName \"specificity\"])\n    #######################################################################################################################\n    set L_allGenes $L_allGenesOverlapped\n    lappend L_allGenes {*}$L_allRegulatedGenes\n    set L_allGenes [lsort -unique $L_allGenes]\n    if {$g_AnnotSV(PhenoGeniusCli)} {\n        set L_NCBI_ID {}\n        foreach g $L_allGenes {\n            set NCBI_ID [searchforNCBIGeneID $g]\n            if {$NCBI_ID ne \"\"} {\n                lappend L_NCBI_ID $NCBI_ID\n            }\n        }\n        set L_NCBI_ID [lsort -unique $L_NCBI_ID]\n        runPhenoGeniusCli \"$L_allGenes\" \"$L_NCBI_ID\" \"$g_AnnotSV(hpo)\"\n    }\n    if {$g_AnnotSV(hpo) ne \"\" && $L_allGenes ne \"\"} {\n        runExomiser \"$L_allGenes\" \"$g_AnnotSV(hpo)\"\n    }\n    \n    ## HI/TS information for these regulated genes\n    ## -> definition of g_HI($gene) and g_TS($gene)\n    ###############################################\n    set clingenDir \"$g_AnnotSV(annotationsDir)/Annotations_$g_AnnotSV(organism)/Gene-based/ClinGen\"\n    set ClinGenFileFormatted [lindex [glob -nocomplain \"$clingenDir/*_ClinGenAnnotations.tsv*\"] end]\n    foreach g $L_allRegulatedGenes {\n        set t($g) 1\n    }\n    if {$ClinGenFileFormatted ne \"\"} {\n        if {[regexp \".gz$\" $ClinGenFileFormatted]} {\n            set f [open \"| gzip -cd $ClinGenFileFormatted\"]\n        } else {\n            set f [open \"$ClinGenFileFormatted\"]\n        }\n        while {! [eof $f]} {\n            set L [gets $f]\n            set Ls [split $L \"\\t\"]\n            set gene [lindex $Ls 0]\n            if {[info exists t($gene)]} {\n                set HI [lindex $Ls 1]; if {$HI ne \"Not yet evaluated\"} {set g_HI($gene) \"$HI\"}\n                set TS [lindex $Ls 2]; if {$TS ne \"Not yet evaluated\"} {set g_TS($gene) \"$TS\"}\n            }\n        }\n    }\n    \n    ## Resume RE information for each SV\n    ## -> definition of g_re($SVfromBED)\n    ####################################\n    foreach SV [array names g_genesReg] {\n        set g_re($SV) \"\"\n        set re_priority($SV) \"\"\n        set re_other($SV) \"\"\n        set re_noann($SV) \"\"\n        foreach gName \"$g_genesReg($SV)\" {\n            if {$g_AnnotSV(REselect2)} {\n                # AnnotSV restrict the report of the regulated genes to the ones not present in \"Gene_name\".\n                if {[lsearch -exact $L_allGenesOverlapped $gName] ne \"-1\"} {continue}\n            }\n            set HI \"\"\n            catch {set HI \"$g_HI($gName)\"}\n            set TS \"\"\n            catch {set TS \"$g_TS($gName)\"}\n            if {$g_AnnotSV(PhenoGeniusCli)} {\n                set PhenoGeniusSpecificity \"[PhenoGeniusCliAnnotation $gName \"specificity\"]\"\n            } else {set PhenoGeniusSpecificity \"\"}\n            if {$g_AnnotSV(hpo) ne \"\"} {\n                set exomiserScore \"[ExomiserAnnotation $gName \"score\"]\"\n            } else {set exomiserScore \"\"}\n            \n            set lAnn {}\n            set priority 0\n            if {$g_AnnotSV(REselect1)} {\n                # By default, only the genes entering in one of the following categories are reported:\n                #  - OMIM morbid genes\n                #  - HI genes (ClinGen HI = 3)\n                #  - TS genes (ClinGen TS = 3)\n                #  - Phenotype matched genes (PhenoGenius specificity = \"A\" or Exomiser gene score > 0.7)\n                #  - User candidate genes\n                if {$HI eq \"3\"} {lappend lAnn \"HI=$HI\"}\n                if {$TS eq \"3\"} {lappend lAnn \"TS=$TS\"}\n                if {$PhenoGeniusSpecificity eq \"A\"} {lappend lAnn \"PG=A\"; set priority 1}\n                if {$exomiserScore ne \"\" && $exomiserScore > 0.7} {lappend lAnn \"EX=$exomiserScore\"; set priority 1}\n                if {[isMorbid $gName]} {lappend lAnn \"morbid\"}\n                if {[isCandidate $gName]} {lappend lAnn \"candidate\"}\n                if {$lAnn eq \"\"} {\n                    continue\n                } else {\n                    lappend lAnn \"RE=[join $g_reDB($SV,$gName) \"+\"]\"\n                }\n            } else {\n                if {$HI ne \"\"} {lappend lAnn \"HI=$HI\"}\n                if {$TS ne \"\"} {lappend lAnn \"TS=$TS\"}\n                if {$PhenoGeniusSpecificity ne \"\"} {lappend lAnn \"PG=A\"}\n                if {$exomiserScore ne \"\" && $exomiserScore ne \"0.0000\" && $exomiserScore ne \"-1.0\"} {lappend lAnn \"EX=$exomiserScore\"}\n                if {[isMorbid $gName]} {lappend lAnn \"morbid\"}\n                if {[isCandidate $gName]} {lappend lAnn \"candidate\"}\n                lappend lAnn \"RE=[join $g_reDB($SV,$gName) \"+\"]\"\n            }\n            if {$lAnn ne \"\"} {\n                if {$priority} {\n                    lappend re_priority($SV) \"$gName ([join $lAnn \"/\"])\"\n                } else {\n                    lappend re_other($SV) \"$gName ([join $lAnn \"/\"])\"\n                }\n            } else {\n                lappend re_noann($SV) \"$gName\"\n            }\n        }\n        \n        # We prioritarily keep RE with \"PhenoGenius specificity = \"A\" or Exomiser gene score > 0.7\" (for the ranking)\n        if {$re_priority($SV) ne \"\"} {\n            set g_re($SV) $re_priority($SV)\n        } elseif {$re_other($SV) ne \"\"} {\n            lappend g_re($SV) {*}$re_other($SV)\n        } elseif {$re_noann($SV) ne \"\"} {\n            lappend g_re($SV) {*}$re_noann($SV)\n        }\n        \n        # AnnotSV restricts the number of overlapping reported features to 50\n        if {[llength $g_re($SV)] > 50} {\n            set g_re($SV) \"[join [lrange $g_re($SV) 0 49] \";\"]...\"\n        } else {\n            set g_re($SV) [join $g_re($SV) \";\"]\n        }\n    }\n    \n    return\n}\n\n"
  },
  {
    "path": "share/tcl/AnnotSV/AnnotSV-repeat.tcl",
    "content": "############################################################################################################\n# AnnotSV 3.5.8                                                                                            #\n#                                                                                                          #\n# AnnotSV: An integrated tool for Structural Variations annotation and ranking                             #\n#                                                                                                          #\n# Copyright (C) 2017-present Veronique Geoffroy (veronique.geoffroy@inserm.fr)                             #\n#                                                                                                          #\n# This is part of AnnotSV source code.                                                                     #\n#                                                                                                          #\n# This program is free software; you can redistribute it and/or                                            #\n# modify it under the terms of the GNU General Public License                                              #\n# as published by the Free Software Foundation; either version 3                                           #\n# of the License, or (at your option) any later version.                                                   #\n#                                                                                                          #\n# This program is distributed in the hope that it will be useful,                                          #\n# but WITHOUT ANY WARRANTY; without even the implied warranty of                                           #\n# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the                                            #\n# GNU General Public License for more details.                                                             #\n#                                                                                                          #\n# You should have received a copy of the GNU General Public License                                        #\n# along with this program; If not, see <http://www.gnu.org/licenses/>.                                     #\n############################################################################################################\n\n\n## - Check if the following file exist:\n#    - 'date'_Repeat.bed\nproc checkRepeatFile {} {\n    \n    global g_AnnotSV\n    \n    ## Check if the repeat file has been downloaded then formatted\n    #############################################################\n    set extannDir \"$g_AnnotSV(annotationsDir)/Annotations_$g_AnnotSV(organism)/BreakpointsAnnotations\"\n    set repeatFileDownloaded [glob -nocomplain \"$extannDir/Repeat/$g_AnnotSV(genomeBuild)/Repeat.bed\"]\n    set repeatFileFormatted [glob -nocomplain \"$extannDir/Repeat/$g_AnnotSV(genomeBuild)/*_Repeat.sorted.bed\"]\n    \n    if {$repeatFileDownloaded eq \"\" && $repeatFileFormatted eq \"\"} {\n        # No Repeat annotation\n        set g_AnnotSV(repeatAnn) 0\n        return\n    } else {\n        # Repeat annotation\n        set g_AnnotSV(repeatAnn) 1\n        # Check if the user asked for these annotations in the configfile\n        set test 0\n        foreach col \"Repeat_coord_left Repeat_type_left Repeat_coord_right Repeat_type_right\" {\n            if {[lsearch -exact \"$g_AnnotSV(outputColHeader)\" $col] ne -1} {set test 1;break}\n        }\n        if {$test eq 0} {set g_AnnotSV(repeatAnn) 0; return}\n    }\n    \n    if {[llength $repeatFileFormatted]>1} {\n        puts \"Several repeat files exist:\"\n        puts \"$repeatFileFormatted\"\n        puts \"Keep only one: [lindex $repeatFileFormatted end]\\n\"\n        foreach repeat [lrange $repeatFileFormatted 0 end-1] {\n            file rename -force $repeat $repeat.notused\n        }\n        return\n    }\n    \n    if {$repeatFileFormatted eq \"\"} {\n        # The downloaded file exist but not the formatted.\n        set repeatFileFormatted \"$extannDir/Repeat/$g_AnnotSV(genomeBuild)/[clock format [clock seconds] -format \"%Y%m%d\"]_Repeat.sorted.bed\"\n        file delete -force $repeatFileFormatted.tmp\n        puts \"\\t...Repeats configuration ([clock format [clock seconds] -format \"%B %d %Y - %H:%M\"])\"\n        puts \"\\t\\t...creation of $repeatFileFormatted\"\n        puts \"\\t\\t   (done only once during the first Repeats annotation)\"\n        \n        set f [open $repeatFileDownloaded]\n        set i 0\n        set L_Text {}\n        while {![eof $f]} {\n            set L [gets $f]\n            if {$L eq \"\"} {continue}\n            regsub \"^chr\" $L \"\" L\n            set chrom [lindex $L 0]\n            if {[lsearch -exact {1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 X Y M MT} $chrom] eq -1} {continue}\n            lappend L_Text \"$L\"\n            if {$i>500000} {\n                WriteTextInFile [join $L_Text \"\\n\"] $repeatFileFormatted.tmp\n                set L_Text {}\n                set i 0\n            }\n        }\n        WriteTextInFile [join $L_Text \"\\n\"] $repeatFileFormatted.tmp\n        \n        # Sorting of the bedfile:\n        # Intersection with very large files can cause trouble with excessive memory usage.\n        # A presort of the bed files by chromosome and then by start position combined with the use of the -sorted option will invoke a memory-efficient algorithm.\n        set sortTmpFile \"$g_AnnotSV(outputDir)/[clock format [clock seconds] -format \"%Y%m%d-%H%M%S\"]_[pid]_sort.tmp.bash\"\n        ReplaceTextInFile \"#!/bin/bash\" $sortTmpFile\n        WriteTextInFile \"# The locale specified by the environment can affects the traditional sort order. We need to use native byte values.\" $sortTmpFile\n        WriteTextInFile \"export LC_ALL=C\" $sortTmpFile\n        WriteTextInFile \"sort -k1,1 -k2,2n $repeatFileFormatted.tmp > $repeatFileFormatted\" $sortTmpFile\n        file attributes $sortTmpFile -permissions 0755\n        if {[catch {eval exec bash $sortTmpFile} Message]} {\n            puts \"-- checkRepeatFile --\"\n            puts \"sort -k1,1 -k2,2n $repeatFileFormatted.tmp > $repeatFileFormatted\"\n            puts \"$Message\"\n            puts \"Exit with error\"\n            exit 2\n        }\n        file delete -force $sortTmpFile\n        file delete -force $repeatFileFormatted.tmp\n        file delete -force $repeatFileDownloaded\n        \n        close $f\n        \n        return\n    }\n}\n\n\n\nproc RepeatAnnotation {BreakpointChrom BreakpointPos} {\n    \n    global g_AnnotSV\n    global g_Repeat_type\n    global g_Repeat_coord\n    global g_Repeat\n    \n    \n    # headerOutput \"Repeat_coord_left Repeat_type_left\" or \"Repeat_coord_right and Repeat_type_right\"\n    # (RepeatAnnotation is executed for each breakpoint)\n    set g_Repeat(Empty) \"\\t\"\n    \n    set extannDir \"$g_AnnotSV(annotationsDir)/Annotations_$g_AnnotSV(organism)/BreakpointsAnnotations\"\n    set repeatFileFormatted [glob -nocomplain \"$extannDir/Repeat/$g_AnnotSV(genomeBuild)/*_Repeat.sorted.bed\"]\n    \n    if {![info exists g_Repeat(DONE)]} {\n        \n        # Creation of a bedfile with all breakpoints +/- 100 bp:\n        # => done during the GC content annotation (if \"GC content\" annotation is in the output (user defined))\n        # FORMAT:  chrom   'breakpoint-100'   'breakpoint+100'   'breakpoint'\n        regsub -nocase \"(.formatted)?.bed$\" $g_AnnotSV(bedFile) \".breakpoints.bed\" tmpBreakpointsFile\n        set tmpBreakpointsFile \"$g_AnnotSV(outputDir)/[file tail $tmpBreakpointsFile]\"\n        if {![file exists $tmpBreakpointsFile]} {\n            file delete -force $tmpBreakpointsFile.tmp\n            set i 0\n            set L_LinesToWrite {}\n            set f [open $g_AnnotSV(bedFile)]\n            while {![eof $f]} {\n                set L [gets $f]\n                if {$L eq \"\"} {continue}\n                set Ls [split $L \"\\t\"]\n                set chrom [lindex $Ls 0]\n                set start [lindex $Ls 1]\n                set end [lindex $Ls 2]\n                set start_breakpoint1 [expr $start-100]; if {$start_breakpoint1 < 0} {set start_breakpoint1 0}\n                set end_breakpoint1 [expr $start+100]  ; if {$end_breakpoint1 < 0} {set end_breakpoint1 0}\n                set start_breakpoint2 [expr $end-100]  ; if {$start_breakpoint2 < 0} {set start_breakpoint2 0}\n                set end_breakpoint2 [expr $end+100]    ; if {$end_breakpoint2 < 0} {set end_breakpoint2 0}\n                lappend L_LinesToWrite \"$chrom\\t$start_breakpoint1\\t$end_breakpoint1\\t$start\"\n                lappend L_LinesToWrite \"$chrom\\t$start_breakpoint2\\t$end_breakpoint2\\t$end\"\n                incr i\n                if {$i>100000} {\n                    WriteTextInFile [join [lsort -unique $L_LinesToWrite] \"\\n\"] $tmpBreakpointsFile.tmp\n                    set L_LinesToWrite {}\n                    set i 0\n                }\n            }\n            close $f\n            WriteTextInFile [join [lsort -unique $L_LinesToWrite] \"\\n\"] $tmpBreakpointsFile.tmp\n            unset L_LinesToWrite\n            \n            # Sorting of the bedfile:\n            # Intersection with very large files can cause trouble with excessive memory usage.\n            # A presort of the bed files by chromosome and then by start position combined with the use of the -sorted option will invoke a memory-efficient algorithm.\n            set sortTmpFile \"$g_AnnotSV(outputDir)/[clock format [clock seconds] -format \"%Y%m%d-%H%M%S\"]_[pid]_sort.tmp.bash\"\n            ReplaceTextInFile \"#!/bin/bash\" $sortTmpFile\n            WriteTextInFile \"# The locale specified by the environment can affects the traditional sort order. We need to use native byte values.\" $sortTmpFile\n            WriteTextInFile \"export LC_ALL=C\" $sortTmpFile\n            WriteTextInFile \"sort -k1,1 -k2,2n $tmpBreakpointsFile.tmp > $tmpBreakpointsFile\" $sortTmpFile\n            file attributes $sortTmpFile -permissions 0755\n            if {[catch {eval exec bash $sortTmpFile} Message]} {\n                puts \"-- RepeatAnnotation, sort --\"\n                puts \"sort -k1,1 -k2,2n $tmpBreakpointsFile.tmp > $tmpBreakpointsFile\"\n                puts \"$Message\"\n                puts \"Exit with error\"\n                exit 2\n            }\n            file delete -force $sortTmpFile\n            file delete -force $tmpBreakpointsFile.tmp\n            \n        }\n        \n        # Intersect\n        regsub -nocase \"(.formatted)?.bed$\" $g_AnnotSV(bedFile) \".intersect.Repeat.bed\" tmpRepeatFile\n        set tmpRepeatFile \"$g_AnnotSV(outputDir)/[file tail $tmpRepeatFile]\"\n        file delete -force $tmpRepeatFile\n        if {[catch {exec $g_AnnotSV(bedtools) intersect -sorted -a $tmpBreakpointsFile -b $repeatFileFormatted -wa -wb > $tmpRepeatFile} Message]} {\n            if {[catch {exec $g_AnnotSV(bedtools) intersect -a $tmpBreakpointsFile -b $repeatFileFormatted -wa -wb > $tmpRepeatFile} Message]} {\n                puts \"-- RepeatAnnotation, intersect --\"\n                puts \"$g_AnnotSV(bedtools) intersect -sorted -a $tmpBreakpointsFile -b $repeatFileFormatted -wa -wb > $tmpRepeatFile\"\n                puts \"$Message\"\n                puts \"Exit with error\"\n                exit 2\n            }\n        }\n        \n        # Loading g_Repeat for each SV breakpoint\n        set f [open $tmpRepeatFile]\n        while {![eof $f]} {\n            set L [gets $f]\n            if {$L eq \"\"} {continue}\n            set Ls [split $L \"\\t\"]\n            \n            set chrom [lindex $Ls 0]\n            set breakpoint [lindex $Ls 3]\n            set repeatStart [lindex $Ls 5]\n            set repeatEnd [lindex $Ls 6]\n            set repeatType [lindex $Ls 7]\n            \n            lappend g_Repeat_coord($chrom,$breakpoint) \"$chrom:$repeatStart-$repeatEnd\"\n            lappend g_Repeat_type($chrom,$breakpoint) \"$repeatType\"\n        }\n        \n        set g_Repeat(DONE) 1\n        file delete -force $tmpRepeatFile\n        \n    }\n    \n    if {[info exist g_Repeat_coord($BreakpointChrom,$BreakpointPos)]} {\n        return \"[join $g_Repeat_coord($BreakpointChrom,$BreakpointPos) \";\"]\\t[join $g_Repeat_type($BreakpointChrom,$BreakpointPos) \";\"]\"\n    } else {\n        return $g_Repeat(Empty)\n    }\n}\n\n"
  },
  {
    "path": "share/tcl/AnnotSV/AnnotSV-segdup.tcl",
    "content": "############################################################################################################\n# AnnotSV 3.5.8                                                                                            #\n#                                                                                                          #\n# AnnotSV: An integrated tool for Structural Variations annotation and ranking                             #\n#                                                                                                          #\n# Copyright (C) 2017-present Veronique Geoffroy (veronique.geoffroy@inserm.fr)                             #\n#                                                                                                          #\n# This is part of AnnotSV source code.                                                                     #\n#                                                                                                          #\n# This program is free software; you can redistribute it and/or                                            #\n# modify it under the terms of the GNU General Public License                                              #\n# as published by the Free Software Foundation; either version 3                                           #\n# of the License, or (at your option) any later version.                                                   #\n#                                                                                                          #\n# This program is distributed in the hope that it will be useful,                                          #\n# but WITHOUT ANY WARRANTY; without even the implied warranty of                                           #\n# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the                                            #\n# GNU General Public License for more details.                                                             #\n#                                                                                                          #\n# You should have received a copy of the GNU General Public License                                        #\n# along with this program; If not, see <http://www.gnu.org/licenses/>.                                     #\n############################################################################################################\n\n\n## - Check if the downloaded \"SegDup.bed\" file or the formatted \"*_SegDup.sorted.bed\" file exist\nproc checkSegDupFile {} {\n    \n    global g_AnnotSV\n    \n    ## Check if the SegDup file has been downloaded then formatted\n    #############################################################\n    set extannDir \"$g_AnnotSV(annotationsDir)/Annotations_$g_AnnotSV(organism)/BreakpointsAnnotations\"\n    set segdupFileDownloaded [glob -nocomplain \"$extannDir/SegDup/$g_AnnotSV(genomeBuild)/SegDup.bed\"]\n    set segdupFileFormatted [glob -nocomplain \"$extannDir/SegDup/$g_AnnotSV(genomeBuild)/*_SegDup.sorted.bed\"]\n    \n    if {$segdupFileDownloaded eq \"\" && $segdupFileFormatted eq \"\"} {\n        # No SegDup annotation\n        set g_AnnotSV(segdupAnn) 0\n        return\n    } else {\n        # SegDup annotation\n        set g_AnnotSV(segdupAnn) 1\n        # Check if the user asked for these annotations in the configfile\n        set test 0\n        foreach col \"SegDup_left SegDup_right\" {\n            if {[lsearch -exact \"$g_AnnotSV(outputColHeader)\" $col] ne -1} {set test 1;break}\n        }\n        if {$test eq 0} {set g_AnnotSV(segdupAnn) 0; return}\n    }\n    \n    if {[llength $segdupFileFormatted]>1} {\n        puts \"Several segmental duplication files exist:\"\n        puts \"$segdupFileFormatted\"\n        puts \"Keep only one: [lindex $segdupFileFormatted end]\\n\"\n        foreach segdup [lrange $segdupFileFormatted 0 end-1] {\n            file rename -force $segdup $segdup.notused\n        }\n        return\n    }\n    \n    if {$segdupFileFormatted eq \"\"} {\n        # The downloaded file exist but not the formatted.\n        set segdupFileFormatted \"$extannDir/SegDup/$g_AnnotSV(genomeBuild)/[clock format [clock seconds] -format \"%Y%m%d\"]_SegDup.sorted.bed\"\n        puts \"\\t...creation of the \\\"[file tail $segdupFileFormatted]\\\" file ([clock format [clock seconds] -format \"%B %d %Y - %H:%M\"])\\n\\t   (done only once)\"\n        ReplaceTextInFile \"#Chrom\\tStart\\tEnd\\tSegDup\" $segdupFileFormatted.tmp\n        \n        set f [open $segdupFileDownloaded]\n        set i 0\n        set L_Text {}\n        while {![eof $f]} {\n            set L [gets $f]\n            if {$L eq \"\"} {continue}\n            if {[regexp \"^#\" $L]} {continue}\n            \n            set Ls [split $L \"\\t\"]\n            regsub \"chr\" [lindex $Ls 0] \"\" chrom\n            set start [lindex $Ls 1]\n            set end [lindex $Ls 2]\n            set IDsegdup \"${chrom}:${start}-${end}\"\n            \n            lappend L_Text \"$chrom\\t$start\\t$end\\t$IDsegdup\"\n            if {$i>500000} {\n                WriteTextInFile [join $L_Text \"\\n\"] $segdupFileFormatted.tmp\n                set L_Text {}\n                set i 0\n            }\n            incr i\n        }\n        WriteTextInFile [join $L_Text \"\\n\"] $segdupFileFormatted.tmp\n        \n        # Sorting of the bedfile:\n        # Intersection with very large files can cause trouble with excessive memory usage.\n        # A presort of the bed files by chromosome and then by start position combined with the use of the -sorted option will invoke a memory-efficient algorithm.\n        set sortTmpFile \"$g_AnnotSV(outputDir)/[clock format [clock seconds] -format \"%Y%m%d-%H%M%S\"]_[pid]_sort.tmp.bash\"\n        ReplaceTextInFile \"#!/bin/bash\" $sortTmpFile\n        WriteTextInFile \"# The locale specified by the environment can affects the traditional sort order. We need to use native byte values.\" $sortTmpFile\n        WriteTextInFile \"export LC_ALL=C\" $sortTmpFile\n        WriteTextInFile \"sort -k1,1 -k2,2n $segdupFileFormatted.tmp > $segdupFileFormatted\" $sortTmpFile\n        file attributes $sortTmpFile -permissions 0755\n        if {[catch {eval exec bash $sortTmpFile} Message]} {\n            puts \"-- checkSegDupFile --\"\n            puts \"sort -k1,1 -k2,2n $segdupFileFormatted.tmp > $segdupFileFormatted\"\n            puts \"$Message\"\n            puts \"Exit with error\"\n            exit 2\n        }\n        file delete -force $sortTmpFile\n        file delete -force $segdupFileFormatted.tmp\n        file delete -force $segdupFileDownloaded\n        \n        close $f\n        \n        return\n    }\n}\n\n\n\nproc SegDupAnnotation {BreakpointChrom BreakpointPos} {\n    \n    global g_AnnotSV\n    global g_SegDup_type\n    global g_SegDup_coord\n    global g_SegDup\n    \n    \n    # headerOutput \"SegDup_left\" or \"SegDup_right\"\n    # (SegDupAnnotation is executed for each breakpoint)\n    set g_SegDup(Empty) \"\"\n    \n    set extannDir \"$g_AnnotSV(annotationsDir)/Annotations_$g_AnnotSV(organism)/BreakpointsAnnotations\"\n    set segdupFileFormatted [glob -nocomplain \"$extannDir/SegDup/$g_AnnotSV(genomeBuild)/*_SegDup.sorted.bed\"]\n    \n    if {![info exists g_SegDup(DONE)]} {\n        \n        # Creation of a bedfile with all breakpoints +/- 100 bp:\n        # => done during the GC content annotation (if \"GC content\" annotation is in the output (user defined))\n        # FORMAT:  chrom   'breakpoint-100'   'breakpoint+100'   'breakpoint'\n        regsub -nocase \"(.formatted)?.bed$\" $g_AnnotSV(bedFile) \".breakpoints.bed\" tmpBreakpointsFile\n        set tmpBreakpointsFile \"$g_AnnotSV(outputDir)/[file tail $tmpBreakpointsFile]\"\n        if {![file exists $tmpBreakpointsFile]} {\n            file delete -force $tmpBreakpointsFile.tmp\n            set i 0\n            set L_LinesToWrite {}\n            set f [open $g_AnnotSV(bedFile)]\n            while {![eof $f]} {\n                set L [gets $f]\n                if {$L eq \"\"} {continue}\n                set Ls [split $L \"\\t\"]\n                set chrom [lindex $Ls 0]\n                set start [lindex $Ls 1]\n                set end [lindex $Ls 2]\n                set start_breakpoint1 [expr $start-100]; if {$start_breakpoint1 < 0} {set start_breakpoint1 0}\n                set end_breakpoint1 [expr $start+100]  ; if {$end_breakpoint1 < 0} {set end_breakpoint1 0}\n                set start_breakpoint2 [expr $end-100]  ; if {$start_breakpoint2 < 0} {set start_breakpoint2 0}\n                set end_breakpoint2 [expr $end+100]    ; if {$end_breakpoint2 < 0} {set end_breakpoint2 0}\n                lappend L_LinesToWrite \"$chrom\\t$start_breakpoint1\\t$end_breakpoint1\\t$start\"\n                lappend L_LinesToWrite \"$chrom\\t$start_breakpoint2\\t$end_breakpoint2\\t$end\"\n                incr i\n                if {$i>100000} {\n                    WriteTextInFile [join [lsort -unique $L_LinesToWrite] \"\\n\"] $tmpBreakpointsFile.tmp\n                    set L_LinesToWrite {}\n                    set i 0\n                }\n            }\n            close $f\n            WriteTextInFile [join [lsort -unique $L_LinesToWrite] \"\\n\"] $tmpBreakpointsFile.tmp\n            unset L_LinesToWrite\n            \n            # Sorting of the bedfile:\n            # Intersection with very large files can cause trouble with excessive memory usage.\n            # A presort of the bed files by chromosome and then by start position combined with the use of the -sorted option will invoke a memory-efficient algorithm.\n            set sortTmpFile \"$g_AnnotSV(outputDir)/[clock format [clock seconds] -format \"%Y%m%d-%H%M%S\"]_[pid]_sort.tmp.bash\"\n            ReplaceTextInFile \"#!/bin/bash\" $sortTmpFile\n            WriteTextInFile \"# The locale specified by the environment can affects the traditional sort order. We need to use native byte values.\" $sortTmpFile\n            WriteTextInFile \"export LC_ALL=C\" $sortTmpFile\n            WriteTextInFile \"sort -k1,1 -k2,2n $tmpBreakpointsFile.tmp > $tmpBreakpointsFile\" $sortTmpFile\n            file attributes $sortTmpFile -permissions 0755\n            if {[catch {eval exec bash $sortTmpFile} Message]} {\n                puts \"-- SegDupAnnotation, sort --\"\n                puts \"sort -k1,1 -k2,2n $tmpBreakpointsFile.tmp > $tmpBreakpointsFile\"\n                puts \"$Message\"\n                puts \"Exit with error\"\n                exit 2\n            }\n            file delete -force $sortTmpFile\n            file delete -force $tmpBreakpointsFile.tmp\n            \n        }\n        \n        # Intersect\n        regsub -nocase \"(.formatted)?.bed$\" $g_AnnotSV(bedFile) \".intersect.SegDup.bed\" tmpSegDupFile\n        set tmpSegDupFile \"$g_AnnotSV(outputDir)/[file tail $tmpSegDupFile]\"\n        file delete -force $tmpSegDupFile\n        if {[catch {exec $g_AnnotSV(bedtools) intersect -sorted -a $tmpBreakpointsFile -b $segdupFileFormatted -wa -wb > $tmpSegDupFile} Message]} {\n            if {[catch {exec $g_AnnotSV(bedtools) intersect -a $tmpBreakpointsFile -b $segdupFileFormatted -wa -wb > $tmpSegDupFile} Message]} {\n                puts \"-- SegDupAnnotation, intersect --\"\n                puts \"$g_AnnotSV(bedtools) intersect -sorted -a $tmpBreakpointsFile -b $segdupFileFormatted -wa -wb > $tmpSegDupFile\"\n                puts \"$Message\"\n                puts \"Exit with error\"\n                exit 2\n            }\n        }\n        \n        # Loading g_SegDup for each SV breakpoint\n        set f [open $tmpSegDupFile]\n        while {![eof $f]} {\n            set L [gets $f]\n            if {$L eq \"\"} {continue}\n            set Ls [split $L \"\\t\"]\n            \n            set chrom [lindex $Ls 0]\n            set breakpoint [lindex $Ls 3]\n            #set segdupStart [lindex $Ls 5]\n            #set segdupEnd [lindex $Ls 6]\n            #set segdupCoord [lindex $Ls 7]\n            \n            lappend g_SegDup_coord($chrom,$breakpoint) \"[lindex $Ls 7]\"\n        }\n        \n        set g_SegDup(DONE) 1\n        file delete -force $tmpSegDupFile\n    }\n    \n    if {[info exist g_SegDup_coord($BreakpointChrom,$BreakpointPos)]} {\n        return \"[join $g_SegDup_coord($BreakpointChrom,$BreakpointPos) \";\"]\"\n    } else {\n        return $g_SegDup(Empty)\n    }\n}\n\n"
  },
  {
    "path": "share/tcl/AnnotSV/AnnotSV-tad.tcl",
    "content": "############################################################################################################\n# AnnotSV 3.5.8                                                                                            #\n#                                                                                                          #\n# AnnotSV: An integrated tool for Structural Variations annotation and ranking                             #\n#                                                                                                          #\n# Copyright (C) 2017-present Veronique Geoffroy (veronique.geoffroy@inserm.fr)                             #\n#                                                                                                          #\n# This is part of AnnotSV source code.                                                                     #\n#                                                                                                          #\n# This program is free software; you can redistribute it and/or                                            #\n# modify it under the terms of the GNU General Public License                                              #\n# as published by the Free Software Foundation; either version 3                                           #\n# of the License, or (at your option) any later version.                                                   #\n#                                                                                                          #\n# This program is distributed in the hope that it will be useful,                                          #\n# but WITHOUT ANY WARRANTY; without even the implied warranty of                                           #\n# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the                                            #\n# GNU General Public License for more details.                                                             #\n#                                                                                                          #\n# You should have received a copy of the GNU General Public License                                        #\n# along with this program; If not, see <http://www.gnu.org/licenses/>.                                     #\n############################################################################################################\n\n\n## - Check if the following TAD files has been downloaded:\n#    - ENC*.bed\n#\n## - Check and create if necessary the 'date'_boundariesTAD.sorted.bed file\n##   Header:\n##   Chrom_boundary  Start_boundary  End_boundary  ENCODE_experiment  TAD_coordinates\n##\nproc checkTADfiles {} {\n    \n    global g_AnnotSV\n    \n    \n    ## Check if TAD files has been downloaded then formatted\n    #######################################################\n    set extannDir \"$g_AnnotSV(annotationsDir)/Annotations_$g_AnnotSV(organism)\"\n    set TADfilesDownloaded [glob -nocomplain \"$extannDir/FtIncludedInSV/TAD/$g_AnnotSV(genomeBuild)/ENC*.bed.gz\"]\n    set boundariesTADfileFormatted [glob -nocomplain \"$extannDir/FtIncludedInSV/TAD/$g_AnnotSV(genomeBuild)/*_boundariesTAD.sorted.bed\"]\n    \n    if {$TADfilesDownloaded eq \"\" && $boundariesTADfileFormatted eq \"\"} {\n        # No TAD annotation (with extAnn procedure)\n        set g_AnnotSV(tadAnn) 0\n        return\n    } else {\n        set g_AnnotSV(tadAnn) 1\n        # Check if the user asked for these annotations in the configfile\n        set test 0\n        foreach col \"TAD_coordinate ENCODE_experiment\" {\n            if {[lsearch -exact \"$g_AnnotSV(outputColHeader)\" $col] ne -1} {set test 1;break}\n        }\n        if {$test eq 0} {set g_AnnotSV(tadAnn) 0; return}\n    }\n    \n    if {[llength $boundariesTADfileFormatted]>1} {\n        puts \"Several TAD files exist:\"\n        puts \"$boundariesTADfileFormatted\"\n        puts \"Keep only one: [lindex $boundariesTADfileFormatted end]\\n\"\n        foreach tad [lrange $boundariesTADfileFormatted 0 end-1] {\n            file rename -force $tad $tad.notused\n        }\n        return\n    }\n    \n    if {$boundariesTADfileFormatted eq \"\"} {\n        # The downloaded file exist but not the formatted.\n        ## Create:\n        ##   - 'date'_boundariesTAD.sorted.bed   ; # Header: chr boundaryStart boundaryEnd ENCODEexperiments correspondingTADs\n        set boundariesTADfileFormatted \"$extannDir/FtIncludedInSV/TAD/$g_AnnotSV(genomeBuild)/[clock format [clock seconds] -format \"%Y%m%d\"]_boundariesTAD.sorted.bed\"\n        \n        puts \"\\t...TAD configuration\"\n        \n        puts \"\\t\\t...creation of $boundariesTADfileFormatted\"\n        puts \"\\t\\t   (done only once during the first boundaries TAD annotation)\"\n        \n        foreach TADfile [glob -nocomplain \"$extannDir/FtIncludedInSV/TAD/$g_AnnotSV(genomeBuild)/ENC*.bed.gz\"] {\n            regsub -nocase \".bed$\" $TADfile \"\" ENCODEexperiment\n            regsub \".*/\" $ENCODEexperiment \"\" ENCODEexperiment\n            foreach L [LinesFromGZFile $TADfile] {\n                if {[regexp \"^#\" $L]} {continue}\n                regsub \"chr\" [lindex $L 0] \"\" chrom\n                set TADstart [lindex $L 1]\n                set TADend [lindex $L 2]\n                if {[regexp \"___boundary\" $L]} {\n                    set boundarieStart $TADstart\n                    set boundariesEnd [expr $TADstart+40000]\n                } else {\n                    set boundarieStart [expr $TADstart-40000]\n                    set boundariesEnd $TADstart\n                    set TADstart $boundarieStart\n                    set TADend [expr $TADend+40000]\n                }\n                # BED format: chromStart - The first base in a chromosome is numbered 0.\n                if {$boundarieStart < 0} {set boundarieStart 0}\n                if {$boundariesEnd <= $boundarieStart} {continue}\n                lappend experiment($chrom\\t$boundarieStart\\t$boundariesEnd) \"$ENCODEexperiment\"\n                lappend TAD($chrom\\t$boundarieStart\\t$boundariesEnd) \"$chrom:$TADstart-$TADend\"\n                lappend L_allLines($chrom) \"$boundarieStart\\t$boundariesEnd\"\n            }\n        }\n        \n        foreach chrom {1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 X Y M MT} {\n            if {![info exists L_allLines($chrom)]} {continue}\n            foreach bounds [lsort -command AscendingSortOnElement0 [lsort -command AscendingSortOnElement1 [lsort -unique $L_allLines($chrom)]]] {\n                WriteTextInFile \"$chrom\\t$bounds\\t[join [lsort -unique $experiment($chrom\\t$bounds)] \",\"]\\t[join [lsort -unique $TAD($chrom\\t$bounds)] \",\"]\" $boundariesTADfileFormatted.tmp\n            }\n        }\n        \n        # Sorting of the bedfile:\n        # Intersection with very large files can cause trouble with excessive memory usage.\n        # A presort of the bed files by chromosome and then by start position combined with the use of the -sorted option will invoke a memory-efficient algorithm.\n        set sortTmpFile \"$g_AnnotSV(outputDir)/[clock format [clock seconds] -format \"%Y%m%d-%H%M%S\"]_[pid]_sort.tmp.bash\"\n        ReplaceTextInFile \"#!/bin/bash\" $sortTmpFile\n        WriteTextInFile \"# The locale specified by the environment can affects the traditional sort order. We need to use native byte values.\" $sortTmpFile\n        WriteTextInFile \"export LC_ALL=C\" $sortTmpFile\n        WriteTextInFile \"sort -k1,1 -k2,2n $boundariesTADfileFormatted.tmp > $boundariesTADfileFormatted\" $sortTmpFile\n        file attributes $sortTmpFile -permissions 0755\n        if {[catch {eval exec bash $sortTmpFile} Message]} {\n            puts \"-- checkTADfiles --\"\n            puts \"sort -k1,1 -k2,2n $boundariesTADfileFormatted.tmp > $boundariesTADfileFormatted\"\n            puts \"$Message\"\n            puts \"Exit with error\"\n            exit 2\n        }\n        \n        file delete -force $sortTmpFile\n        file delete -force $boundariesTADfileFormatted.tmp\n        \n        foreach TADfile $TADfilesDownloaded {\n            file delete -force $TADfile\n        }\n        \n    }\n}\n\n\nproc TADannotation {SVchrom SVstart SVend L_i} {\n    \n    global g_AnnotSV\n    global tadText\n    \n    \n    set extannDir \"$g_AnnotSV(annotationsDir)/Annotations_$g_AnnotSV(organism)\"\n    set boundariesTADfileFormatted [glob -nocomplain \"$extannDir/FtIncludedInSV/TAD/$g_AnnotSV(genomeBuild)/*_boundariesTAD.sorted.bed\"]\n    \n    if {![info exists tadText(DONE)]} {\n        \n        # headerOutput \"TAD_coordinate\\tENCODE_experiment\"\n        set L_tadText(Empty) \"{} {}\"\n        foreach i $L_i {\n            lappend tadText(Empty) \"[lindex $L_tadText(Empty) $i]\"\n        }\n        set tadText(Empty) [join $tadText(Empty) \"\\t\"]\n        \n        # Intersect\n        regsub -nocase \"(.formatted)?.bed$\" $g_AnnotSV(bedFile) \".intersect.tad\" tmpFile\n        set tmpFile \"$g_AnnotSV(outputDir)/[file tail $tmpFile]\"\n        file delete -force $tmpFile\n        if {[catch {exec $g_AnnotSV(bedtools) intersect -sorted -a $g_AnnotSV(bedFile) -b $boundariesTADfileFormatted -wa -wb > $tmpFile} Message]} {\n            if {[catch {exec $g_AnnotSV(bedtools) intersect -a $g_AnnotSV(bedFile) -b $boundariesTADfileFormatted -wa -wb > $tmpFile} Message]} {\n                puts \"-- TADannotation --\"\n                puts \"$g_AnnotSV(bedtools) intersect -sorted -a $g_AnnotSV(bedFile) -b $boundariesTADfileFormatted -wa -wb > $tmpFile\"\n                puts \"$Message\"\n                puts \"Exit with error\"\n                exit 2\n            }\n        }\n        # Parse\n        set f [open $tmpFile]\n        while {![eof $f]} {\n            set L [gets $f]\n            if {$L eq \"\"} {continue}\n            set Ls [split $L \"\\t\"]\n            set SVtoAnn_chrom [lindex $Ls 0]\n            set SVtoAnn_start [lindex $Ls 1]\n            set SVtoAnn_end   [lindex $Ls 2]\n            \n            set TAD_coordinates  [lindex $Ls end]\n            set TAD_ENCODEexperiments [lindex $Ls end-1]\n            set boundary_end [lindex $Ls end-2]\n            set boundary_start [lindex $Ls end-3]\n            \n            # Select:\n            # - TAD boundaries that share > XX % length with the SV to annotate\n            # - TAD boundaries overlapping a SV that is an insertion\n            set boundary_length [expr {$boundary_end-$boundary_start}]\n            set SVtoAnn_length [expr {$SVtoAnn_end - $SVtoAnn_start}]\n            if {$SVtoAnn_length<=1} {\n                # SV to annotate is an insertion\n                set SVtoAnn_length 1\n            } else {\n                # SV to annotate is not an insertion\n                if {$SVtoAnn_start < $boundary_start} {\n                    set overlap_start $boundary_start\n                } else {\n                    set overlap_start $SVtoAnn_start\n                }\n                if {$SVtoAnn_end < $boundary_end} {\n                    set overlap_end $SVtoAnn_end\n                } else {\n                    set overlap_end $boundary_end\n                }\n                set overlap_length [expr {$overlap_end - $overlap_start}]\n                \n                # Keeping only TAD with > 100% overlap with the SV\n                if {[expr {$overlap_length*100.0/$boundary_length}] < 100} {continue}\n                # No reciprocal overlap used for TAD (it would not make sense)\n            }\n            \n            lappend L_experiments($SVtoAnn_chrom,$SVtoAnn_start,$SVtoAnn_end) {*}[split $TAD_ENCODEexperiments \",\"]\n            lappend L_TADcoordinates($SVtoAnn_chrom,$SVtoAnn_start,$SVtoAnn_end) {*}[split $TAD_coordinates \",\"]\n            \n        }\n        \n        \n        # Loading TAD final annotation for each SV\n        foreach SVtoAnn [array names L_experiments] {\n            # Very large SV (e.g. 30Mb) can overlap many TAD (e.g. more than 2600).\n            # e.g. 1:2806107-107058351\n            # So the “full” line can appear truncated in the output if visualized in a spreadsheet.\n            # In order to avoid such embarrassing glitch, AnnotSV gives access to the list of the 20 first TAD coordinates and their associated ENCODE experiments.\n            set L_tadText($SVtoAnn) \"\"\n            lappend L_tadText($SVtoAnn) [join [lrange [lsort -unique $L_TADcoordinates($SVtoAnn)] 0 20] \";\"]\n            lappend L_tadText($SVtoAnn) [join [lrange [lsort -unique $L_experiments($SVtoAnn)] 0 20] \":\"]\n            \n            # Keep only the user requested columns (defined in the configfile)\n            set tadText($SVtoAnn) \"\"\n            foreach i $L_i {\n                lappend tadText($SVtoAnn) \"[lindex $L_tadText($SVtoAnn) $i]\"\n            }\n            set tadText($SVtoAnn) [join $tadText($SVtoAnn) \"\\t\"]\n        }\n        catch {unset L_tadText}\n        set tadText(DONE) 1\n        file delete -force $tmpFile\n    }\n    \n    if {[info exist tadText($SVchrom,$SVstart,$SVend)]} {\n        return $tadText($SVchrom,$SVstart,$SVend)\n    } else {\n        return $tadText(Empty)\n    }\n}\n\n"
  },
  {
    "path": "share/tcl/AnnotSV/AnnotSV-userBED.tcl",
    "content": "############################################################################################################\n# AnnotSV 3.5.8                                                                                            #\n#                                                                                                          #\n# AnnotSV: An integrated tool for Structural Variations annotation and ranking                             #\n#                                                                                                          #\n# Copyright (C) 2017-present Veronique Geoffroy (veronique.geoffroy@inserm.fr)                             #\n#                                                                                                          #\n# This is part of AnnotSV source code.                                                                     #\n#                                                                                                          #\n# This program is free software; you can redistribute it and/or                                            #\n# modify it under the terms of the GNU General Public License                                              #\n# as published by the Free Software Foundation; either version 3                                           #\n# of the License, or (at your option) any later version.                                                   #\n#                                                                                                          #\n# This program is distributed in the hope that it will be useful,                                          #\n# but WITHOUT ANY WARRANTY; without even the implied warranty of                                           #\n# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the                                            #\n# GNU General Public License for more details.                                                             #\n#                                                                                                          #\n# You should have received a copy of the GNU General Public License                                        #\n# along with this program; If not, see <http://www.gnu.org/licenses/>.                                     #\n############################################################################################################\n\n\n# Check the Users BED regions annotations files (from .../Annotations_$g_AnnotSV(organism)/Users/GRCh*/*/*.bed)\n# Create : .../Annotations_$g_AnnotSV(organism)/Users/GRCh*/*/*.formatted.sorted\n# (After the formatting step, the copy and/or linked users file(s) are deleted)\nproc checkUsersBED {} {\n    \n    global g_AnnotSV\n    global g_numberOfAnnotationCol\n    \n    set userBEDdir \"$g_AnnotSV(annotationsDir)/Annotations_$g_AnnotSV(organism)/Users/$g_AnnotSV(genomeBuild)\"\n    foreach userBEDfile [glob -nocomplain $userBEDdir/*/*.bed] {\n        # Create a formatted and sorted bedfile if it doesn't exist yet\n        # and create a *.header.tsv file associated\n        regsub -nocase \"(.formatted.sorted)?.bed$\" $userBEDfile \".bed\" notFormattedFile\n        regsub -nocase \"(.formatted.sorted)?.bed$\" $userBEDfile \".formatted.bed\" formattedFile\n        regsub -nocase \"(.formatted.sorted)?.bed$\" $userBEDfile \".formatted.sorted.bed\" formattedSortedFile\n        regsub -nocase \".bed$\" $notFormattedFile \".header.tsv\" userHeaderFile\n        if {[file exists $notFormattedFile]} {\n            # - Create the formatted bedfile\n            # - Check the *.header.tsv file existence and create it if it doesn't exist yet\n            checkBed $notFormattedFile [file dirname $notFormattedFile]\n            # Create the formatted and sorted bedfile\n            #   Sorting of the bedfile:\n            #   Intersection with very large files can cause trouble with excessive memory usage.\n            #   A presort of the bed files by chromosome and then by start position combined with the use of the -sorted option will invoke a memory-efficient algorithm.\n            set sortTmpFile \"$g_AnnotSV(outputDir)/[clock format [clock seconds] -format \"%Y%m%d-%H%M%S\"]_[pid]_sort.tmp.bash\"\n            ReplaceTextInFile \"#!/bin/bash\" $sortTmpFile\n            WriteTextInFile \"# The locale specified by the environment can affects the traditional sort order. We need to use native byte values.\" $sortTmpFile\n            WriteTextInFile \"export LC_ALL=C\" $sortTmpFile\n            WriteTextInFile \"sort -k1,1 -k2,2n $formattedFile > $formattedSortedFile\" $sortTmpFile\n            file attributes $sortTmpFile -permissions 0755\n            if {[catch {eval exec bash $sortTmpFile} Message]} {\n                puts \"-- checkUsersBED --\"\n                puts \"sort -k1,1 -k2,2n $formattedFile > $formattedSortedFile\"\n                puts \"$Message\"\n                puts \"Exit with error\"\n                exit 2\n            }\n            file delete -force $sortTmpFile\n            file delete -force $formattedFile\n        }\n        \n        # Check that the bed and header files have the same number of columns (and more than 3)\n        set L_all_ColName_from_header   [split [FirstLineFromFile $userHeaderFile] \"\\t\"]\n        set L_ann_ColName_from_header [lrange $L_all_ColName_from_header 3 end]\n        set Ls_BED      [split [FirstLineFromFile $formattedSortedFile] \"\\t\"]\n        set nColHeader [llength $L_all_ColName_from_header]\n        set nColBed    [llength $Ls_BED]\n        if {$nColHeader ne $nColBed} {\n            puts \"WARNING: [file tail $userHeaderFile] has $nColHeader fields, but $nColBed were expected. Header bed file not used.\\n\"\n            file rename -force $userHeaderFile $userHeaderFile.bed\n            WriteTextInFile \"[join [lrepeat $nColBed \"\"] \"\\t\"]\" $userHeaderFile\n            set L_ann_ColName_from_header [expr {$nColBed-3}]\n        } elseif {$nColHeader <=3} {\n            puts \"WARNING: [file tail $userHeaderFile] has $nColHeader fields. More than 3 are expected. Header bed file not used.\\n\"\n            file rename -force $userHeaderFile $userHeaderFile.bed\n            WriteTextInFile \"[join [lrepeat $nColBed \"\"] \"\\t\"]\" $userHeaderFile\n            set L_ann_ColName_from_header [expr {$nColBed-3}]\n        }\n        \n        # Number of annotation columns in the user bedfile (without the 3 columns \"chrom start end\")\n        set g_numberOfAnnotationCol($formattedSortedFile) [llength $L_ann_ColName_from_header]\n    }\n}\n\n\n# Return the annotation of a SV with the userBED file\n# formattedSortedUserBEDfile: \"chrom start end\" (il n'y a que 3 colonnes, pas de col d'annotations)\nproc userBEDannotation {formattedSortedUserBEDfile SVchrom SVstart SVend {use3points 1}} {\n    \n    global g_AnnotSV\n    global g_numberOfAnnotationCol\n    global userBEDtext\n    \n    if {![info exists userBEDtext($formattedSortedUserBEDfile,DONE)]} {\n        \n        set userBEDtext($formattedSortedUserBEDfile,Empty) \"\"\n        \n        regsub -nocase \".formatted.sorted.bed$\" $formattedSortedUserBEDfile \".header.tsv\" userHeaderFile\n        \n        # no intersection with the SV\n        append userBEDtext($formattedSortedUserBEDfile,Empty) \"\\t[join [lrepeat $g_numberOfAnnotationCol($formattedSortedUserBEDfile) \"\"] \"\\t\"]\"\n        \n        # NOTE: $g_AnnotSV(bedFile) = formatted and sorted bedfile!\n        regsub -nocase \".formatted.sorted.bed$\" $g_AnnotSV(bedFile) \".intersect.userBED\" tmpFile\n        set tmpFile \"$g_AnnotSV(outputDir)/[file tail $tmpFile]\"\n        file delete -force $tmpFile\n        \n        # Intersect\n        ###########\n        if {[regexp \"FtIncludedInSV|SVincludedInFt|AnyOverlap\" $formattedSortedUserBEDfile]} {\n            # Intersect (for \"FtIncludedInSV\", \"SVincludedInFt\" and \"AnyOverlap\")\n            if {[catch {exec $g_AnnotSV(bedtools) intersect -sorted -a $g_AnnotSV(fullAndSplitBedFile) -b $formattedSortedUserBEDfile -wa -wb > $tmpFile} Message]} {\n                if {[catch {exec $g_AnnotSV(bedtools) intersect -a $g_AnnotSV(fullAndSplitBedFile) -b $formattedSortedUserBEDfile -wa -wb > $tmpFile} Message]} {\n                    puts \"-- userBEDannotation --\"\n                    puts \"$g_AnnotSV(bedtools) intersect -sorted -a $g_AnnotSV(fullAndSplitBedFile) -b $formattedSortedUserBEDfile -wa -wb > $tmpFile\"\n                    puts \"$Message\"\n                    puts \"Exit with error\"\n                    exit 2\n                }\n            }\n        } elseif {[regexp \"BNDproximity\" $formattedSortedUserBEDfile]} {\n            # Intersect (for \"BNDproximity\")\n            ## <=> At this step, keeping all close user regions\n            if {[catch {exec $g_AnnotSV(bedtools) window -a $g_AnnotSV(fullAndSplitBedFile) -b $formattedSortedUserBEDfile -w $g_AnnotSV(breakpointProximity) > $tmpFile} Message]} {\n                puts \"-- userBEDannotation --\"\n                puts \"$g_AnnotSV(bedtools) window -a $g_AnnotSV(fullAndSplitBedFile) -b $formattedSortedUserBEDfile -w $g_AnnotSV(breakpointProximity) > $tmpFile\"\n                puts \"$Message\"\n                puts \"Exit with error\"\n                exit 2\n            }\n        }\n        \n        # Parse\n        set f [open $tmpFile]\n        while {![eof $f]} {\n            set L [gets $f]\n            if {$L eq \"\"} {continue}\n            set Ls [split $L \"\\t\"]\n            \n            set SVtoAnn_chrom [lindex $Ls 0]\n            set SVtoAnn_start [lindex $Ls 1]\n            set SVtoAnn_end   [lindex $Ls 2]\n            \n            set userFt_end [lindex $Ls end-$g_numberOfAnnotationCol($formattedSortedUserBEDfile)]\n            set userFt_start [lindex $Ls end-[expr {$g_numberOfAnnotationCol($formattedSortedUserBEDfile)+1}]]\n            \n            # Select:\n            #########\n            # - userBED that share > XX% length with the SV to annotate\n            # (doesn't select the INSERTION)\n            set userFt_length [expr {$userFt_end-$userFt_start}]\n            set SVtoAnn_length [expr {$SVtoAnn_end - $SVtoAnn_start}]\n            # The user SV is an insertion or a breakpoint\n            if {$userFt_length<1} {\n                set userFt_length 1\n            }\n            # The SV to annotate is an insertion or a breakpoint\n            if {$SVtoAnn_length<1} {\n                set SVtoAnn_length 1\n            }\n            \n            if {$SVtoAnn_start < $userFt_start} {\n                set overlap_start $userFt_start\n            } else {\n                set overlap_start $SVtoAnn_start\n            }\n            if {$SVtoAnn_end < $userFt_end} {\n                set overlap_end $SVtoAnn_end\n            } else {\n                set overlap_end $userFt_end\n            }\n            set overlap_length [expr {$overlap_end - $overlap_start}]\n            \n            if {[regexp \"FtIncludedInSV\" $formattedSortedUserBEDfile]} {\n                ## FtIncludedInSV:\n                ## <=> Keeping only user regions (userRegion=Ft=Feature) included in the SV to annotate\n                ## <=> Keeping only Ft with >= 100% (\"overlap\" option default) overlap with the SV\n                if {[expr {$overlap_length*100.0/$userFt_length}] < $g_AnnotSV(overlap)} {continue}\n            } elseif {[regexp \"SVincludedInFt\" $formattedSortedUserBEDfile]} {\n                ## SVincludedInFt:\n                ## <=> Keeping user regions respecting the overlaps (reciprocal or not reciprocal)\n                if {[expr {$overlap_length*100.0/$SVtoAnn_length}] < $g_AnnotSV(overlap)} {continue}\n                if {$g_AnnotSV(reciprocal)} {\n                    if {[expr {$overlap_length*100.0/$userFt_length}] < $g_AnnotSV(overlap)} {continue}\n                }\n            } elseif {[regexp \"AnyOverlap\" $formattedSortedUserBEDfile]} {\n                ## AnyOverlap\n                ## <=> Keeping all user regions\n            } elseif {[regexp \"BNDproximity\" $formattedSortedUserBEDfile]} {\n                ## BNDproximity\n                ## <=> |start_SV − start_Ft| < $g_AnnotSV(breakpointProximity) and |end_SV − end_Ft| < $g_AnnotSV(breakpointProximity)\n                if {[expr {abs($SVtoAnn_start-$userFt_start)}] > $g_AnnotSV(breakpointProximity)} {continue}\n                if {[expr {abs($SVtoAnn_end-$userFt_end)}] > $g_AnnotSV(breakpointProximity)} {continue}\n            }\n            \n            # Each SV to annotate can be overlapped with several users regions => use of \"$i\" to merge the annotations column by column\n            set i \"$g_numberOfAnnotationCol($formattedSortedUserBEDfile)\"\n            while {$i > 0} {\n                lappend L_userBEDAnn_${i}($SVtoAnn_chrom,$SVtoAnn_start,$SVtoAnn_end) [lindex $Ls end-[expr {$i-1}]]\n                incr i -1\n            }\n        }\n        \n        # Loading userBED final annotation for each SV\n        set i \"$g_numberOfAnnotationCol($formattedSortedUserBEDfile)\"\n        while {$i > 0} {\n            foreach SVtoAnn [array names L_userBEDAnn_$i] {\n                # We want to keep the same order when removing the redundancy\n                set L_userBEDAnn_${i}($SVtoAnn) [RemoveRedundancyWithoutSorting [set L_userBEDAnn_${i}($SVtoAnn)]]\n                \n                if {$use3points && [llength [set L_userBEDAnn_${i}($SVtoAnn)]] > 50} {\n                    # Too long (often with large SV) and can cause trouble in a spreadsheet. Not used for Cytobands.\n                    set L_userBEDAnn_${i}($SVtoAnn) [lrange [set L_userBEDAnn_${i}($SVtoAnn)] 0 50]\n                    lappend L_userBEDAnn_${i}($SVtoAnn) \"...\"\n                }\n                append userBEDtext($formattedSortedUserBEDfile,$SVtoAnn) \"\\t[join [set L_userBEDAnn_${i}($SVtoAnn)] \";\"]\"\n            }\n            incr i -1\n        }\n        \n        ## Final reajustement\n        set i \"$g_numberOfAnnotationCol($formattedSortedUserBEDfile)\"\n        foreach SVtoAnn [array names L_userBEDAnn_$i] {\n            regsub \"^\\t\" $userBEDtext($formattedSortedUserBEDfile,$SVtoAnn) \"\" userBEDtext($formattedSortedUserBEDfile,$SVtoAnn)\n        }\n        regsub \"^\\t\" $userBEDtext($formattedSortedUserBEDfile,Empty) \"\" userBEDtext($formattedSortedUserBEDfile,Empty)\n        \n        \n        ## Annotation done\n        set userBEDtext($formattedSortedUserBEDfile,DONE) 1\n        set g_AnnotSV(userBEDAnn) 1\n        file delete -force $tmpFile\n    }\n    \n    if {[info exist userBEDtext($formattedSortedUserBEDfile,$SVchrom,$SVstart,$SVend)]} {\n        return $userBEDtext($formattedSortedUserBEDfile,$SVchrom,$SVstart,$SVend)\n    } else {\n        return $userBEDtext($formattedSortedUserBEDfile,Empty)\n    }\n}\n\n"
  },
  {
    "path": "share/tcl/AnnotSV/AnnotSV-variantconvert.tcl",
    "content": "############################################################################################################\n# AnnotSV 3.5.8                                                                                            #\n#                                                                                                          #\n# AnnotSV: An integrated tool for Structural Variations annotation and ranking                             #\n#                                                                                                          #\n# Copyright (C) 2017-present Veronique Geoffroy (veronique.geoffroy@inserm.fr)                             #\n#                                                                                                          #\n# This is part of AnnotSV source code.                                                                     #\n#                                                                                                          #\n# This program is free software; you can redistribute it and/or                                            #\n# modify it under the terms of the GNU General Public License                                              #\n# as published by the Free Software Foundation; either version 3                                           #\n# of the License, or (at your option) any later version.                                                   #\n#                                                                                                          #\n# This program is distributed in the hope that it will be useful,                                          #\n# but WITHOUT ANY WARRANTY; without even the implied warranty of                                           #\n# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the                                            #\n# GNU General Public License for more details.                                                             #\n#                                                                                                          #\n# You should have received a copy of the GNU General Public License                                        #\n# along with this program; If not, see <http://www.gnu.org/licenses/>.                                     #\n############################################################################################################\n\n\n# - Check if the reference fasta file in the variantconvert bed configfiles has the good path\n# - Check if the \"pip install -e .\" command was already run\nproc checkVariantconvertConfigfile {} {\n    \n    global g_AnnotSV\n    \n    # Use of variantconvert to create a vcf output\n    if {$g_AnnotSV(vcf)} {\n        \n        # - Check if the reference fasta file in the variantconvert bed configfiles has the good path\n        #############################################################################################\n        \n        foreach formatFile {bed vcf} {\n            \n            set configfile \"$g_AnnotSV(variantconvertDir)/src/variantconvert/configs/$g_AnnotSV(genomeBuild)/annotsv3_from_$formatFile.json\"\n            \n            if {$g_AnnotSV(variantconvertMode) eq \"combined\"} {\n                set localConfigfile \"$g_AnnotSV(variantconvertDir)/src/variantconvert/configs/$g_AnnotSV(genomeBuild)/annotsv3_from_$formatFile.combined.local.json\"\n            } elseif {$g_AnnotSV(variantconvertMode) eq \"full\"} {\n                set localConfigfile \"$g_AnnotSV(variantconvertDir)/src/variantconvert/configs/$g_AnnotSV(genomeBuild)/annotsv3_from_$formatFile.full.local.json\"\n            } elseif {$g_AnnotSV(variantconvertMode) eq \"fullsplit\"} {\n                set localConfigfile \"$g_AnnotSV(variantconvertDir)/src/variantconvert/configs/$g_AnnotSV(genomeBuild)/annotsv3_from_$formatFile.fullsplit.local.json\"\n            }\n            \n            if {$g_AnnotSV(annotationsDir) ne \"\"} {\n                set pathDir \"$g_AnnotSV(annotationsDir)\"\n            } else {\n                set pathDir \"$g_AnnotSV(installDir)/share/AnnotSV/\"\n            }\n            \n            set distributedPathLine \"\\\"path\\\": \\\".*\\\",\"\n            set newPathLine         \"\\\"path\\\": \\\"$pathDir/Annotations_Human/BreakpointsAnnotations/GCcontent/$g_AnnotSV(genomeBuild)/$g_AnnotSV(genomeBuild)_chromFa.fasta\\\",\"\n            \n            set distributedRefLine  \"\\\"##reference=file:.*\\\"\"\n            set newRefLine          \"\\\"##reference=file:$pathDir/Annotations_Human/BreakpointsAnnotations/GCcontent/$g_AnnotSV(genomeBuild)/$g_AnnotSV(genomeBuild)_chromFa.fasta\\\"\"\n            \n            set distributedModeLine  \"\\\"mode\\\": \\\"combined\\\",\"\n            set newfullModeLine      \"\\\"mode\\\": \\\"full\\\",\"\n            set newfullsplitModeLine \"\\\"mode\\\": \\\"full\\\\&split\\\",\"\n            \n            # 1 - AnnotSV install done with the \"root\" user\n            # 2 - AnnotSV run with \"non-root\" user\n            # (or vice versa)\n            # => The $localConfigfile can not be created by a non-root user. The \"configs\" dir should exists with 777 permissions (Done in the Makefile)\n            \n            # If the user defined a wrong \"-annotationsDir\" during the first execution of AnnotSV (using the -vcf 1 parameter), the $localConfigfile need to be removed then recomputed.\n            if {[file exists $localConfigfile]} {\n                set testPathExists 0\n                set testRefExists 0\n                foreach L [LinesFromFile $localConfigfile] {\n                    if {[regexp \"\\\"path\\\": \\\"(.*)\\\",\" $L match path]} {\n                        if {[file exists $path]} {set testPathExists 1}\n                    }\n                    if {[regexp \"\\\"##reference=file:(.*)\\\"\" $L match ref]} {\n                        if {[file exists $ref]} {set testRefExists 1}\n                    }\n                }\n                if {$testPathExists eq 0 || $testRefExists eq 0} {\n                    file delete -force $localConfigfile\n                }\n            }\n            # If the file has been deleted or does not yet exist:\n            if {![file exists $localConfigfile]} {\n                set L_Lines {}\n                foreach L [LinesFromFile $configfile] {\n                    if {[regexp \"$distributedPathLine\" $L]} {\n                        regsub \"$distributedPathLine\" $L \"$newPathLine\" L\n                    }\n                    if {[regexp \"$distributedRefLine\" $L]} {\n                        regsub \"$distributedRefLine\" $L \"$newRefLine\" L\n                    }\n                    if {[regexp \"$distributedModeLine\" $L]} {\n                        if {$g_AnnotSV(variantconvertMode) eq \"full\"} {\n                            regsub \"$distributedModeLine\" $L \"$newfullModeLine\" L\n                        } elseif {$g_AnnotSV(variantconvertMode) eq \"fullsplit\"} {\n                            regsub \"$distributedModeLine\" $L \"$newfullsplitModeLine\" L\n                        }\n                    }\n                    lappend L_Lines $L\n                }\n                ReplaceTextInFile [join $L_Lines \"\\n\"] $localConfigfile\n            }\n        }\n        \n        # - Check if the \"pip install -e .\" command was already run\n        ###########################################################\n        \n        # => Can be done during the installation with the Makefile (if the python environment is OK)\n        set currentDir [pwd]\n        set flagFile \"$g_AnnotSV(variantconvertDir)/pipinstall.flag\"\n        set vcDone 0\n        catch {\n            if {![file exists $flagFile] || ![regexp -nocase \"Successfully installed variantconvert\" [ContentFromFile $flagFile]]} {\n                cd $g_AnnotSV(variantconvertDir)\n                if {[catch {exec pip3 install -e .} Message]} {\n                    WriteTextInFile \"$Message\" $flagFile\n                    WriteTextInFile \"\\n##############################################\\n\\n\" $flagFile\n                    if {[catch {exec pip install -e .} Message]} {\n                        WriteTextInFile \"$Message\" $flagFile\n                        WriteTextInFile \"\\n##############################################\\n\\n\" $flagFile\n                        if {[catch {exec python -m pip install -e .} Message]} {\n                            WriteTextInFile \"$Message\" $flagFile\n                            WriteTextInFile \"\\n##############################################\\n\\n\" $flagFile\n                        } else {\n                            set vcDone 1\n                        }\n                    } else {\n                        set vcDone 1\n                    }\n                } else {\n                    set vcDone 1\n                }\n            }\n        }\n        if {$vcDone} {\n            WriteTextInFile \"Done\" $flagFile\n        }\n        cd $currentDir\n    }\n}\n\n\n\nproc runVariantconvert {outputFile} {\n    \n    global g_AnnotSV\n    \n    regsub \"\\.tsv$\" $outputFile \".vcf\" VCFoutputFile\n    \n    catch {exec python3 $g_AnnotSV(variantconvertDir)/src/variantconvert --version} Message\n    if {[regexp \"variantconvert (\\[0-9\\]+\\\\.\\[0-9\\]+\\\\.\\[0-9\\]+)\" $Message match version]} {\n        set version \"v$version \"\n    } else {\n        set version \"\"\n    }\n    \n    puts \"...creation of the VCF output file: $VCFoutputFile\"\n    puts \"   AnnotSV relies on the variantconvert tool ${version}(https://github.com/SamuelNicaise/variantconvert)\"\n    \n    regsub \"\\.vcf$\" $VCFoutputFile \".variantconvert.log\" LogFile\n    \n    \n    # run variantconvert\n    ####################\n    \n    if {[regexp -nocase \"\\\\.vcf(.gz)?$\" $g_AnnotSV(SVinputFile)]} {\n        \n        ## SVinputfile is a VCF\n        #######################\n        \n        # configfile definition\n        if {$g_AnnotSV(variantconvertMode) eq \"combined\"} {\n            set localConfigfile \"$g_AnnotSV(variantconvertDir)/src/variantconvert/configs/$g_AnnotSV(genomeBuild)/annotsv3_from_vcf.combined.local.json\"\n        } elseif {$g_AnnotSV(variantconvertMode) eq \"full\"} {\n            set localConfigfile \"$g_AnnotSV(variantconvertDir)/src/variantconvert/configs/$g_AnnotSV(genomeBuild)/annotsv3_from_vcf.full.local.json\"\n        } elseif {$g_AnnotSV(variantconvertMode) eq \"fullsplit\"} {\n            set localConfigfile \"$g_AnnotSV(variantconvertDir)/src/variantconvert/configs/$g_AnnotSV(genomeBuild)/annotsv3_from_vcf.fullsplit.local.json\"\n        }\n        \n        set command \"python3 $g_AnnotSV(variantconvertDir)/src/variantconvert convert -i $outputFile -o $VCFoutputFile -c $localConfigfile\"\n        \n    } else {\n        \n        ## SVinputfile is a BED)\n        ########################\n        \n        # configfile definition\n        if {$g_AnnotSV(variantconvertMode) eq \"combined\"} {\n            set localConfigfile \"$g_AnnotSV(variantconvertDir)/src/variantconvert/configs/$g_AnnotSV(genomeBuild)/annotsv3_from_bed.combined.local.json\"\n        } elseif {$g_AnnotSV(variantconvertMode) eq \"full\"} {\n            set localConfigfile \"$g_AnnotSV(variantconvertDir)/src/variantconvert/configs/$g_AnnotSV(genomeBuild)/annotsv3_from_bed.full.local.json\"\n        } elseif {$g_AnnotSV(variantconvertMode) eq \"fullsplit\"} {\n            set localConfigfile \"$g_AnnotSV(variantconvertDir)/src/variantconvert/configs/$g_AnnotSV(genomeBuild)/annotsv3_from_bed.fullsplit.local.json\"\n        }\n        \n        if {$g_AnnotSV(svtBEDcol) == -1 } {\n            puts \"   WARNING: With a \\\"BED\\\" SV input file, the user has to define the -svtBEDcol option.\"\n            puts \"            => could not create the VCF output file:\"\n            if {$g_AnnotSV(svtBEDcol) == -1}       {puts \"               -svtBEDcol $g_AnnotSV(svtBEDcol)\"}\n            return\n        } else {\n            set command \"python3 $g_AnnotSV(variantconvertDir)/src/variantconvert convert -i $outputFile -o $VCFoutputFile -c $localConfigfile\"\n        }\n    }\n    \n    # variantconvert output\n    #######################\n    catch {eval exec $command} Message\n    regsub -all \"FutureWarning: Setting an item of incompatible dtype is deprecated and will raise in a future error\" $Message \"...\" MessageReg\n    if {[regexp -nocase \"error\" $MessageReg]} {\n        puts \"   (a minimal Python 3.8 installation is required, as well as the natsort, panda and pyfaidx Python modules)\"\n        puts \"Error:\"\n        puts \"   => cf $LogFile\"\n    }\n    ReplaceTextInFile \"$command\\n\\n$Message\" $LogFile\n    \n    return\n}\n\n"
  },
  {
    "path": "share/tcl/AnnotSV/AnnotSV-vcf.tcl",
    "content": "############################################################################################################\n# AnnotSV 3.5.8                                                                                            #\n#                                                                                                          #\n# AnnotSV: An integrated tool for Structural Variations annotation and ranking                             #\n#                                                                                                          #\n# Copyright (C) 2017-present Veronique Geoffroy (veronique.geoffroy@inserm.fr)                             #\n#                                                                                                          #\n# This is part of AnnotSV source code.                                                                     #\n#                                                                                                          #\n# This program is free software; you can redistribute it and/or                                            #\n# modify it under the terms of the GNU General Public License                                              #\n# as published by the Free Software Foundation; either version 3                                           #\n# of the License, or (at your option) any later version.                                                   #\n#                                                                                                          #\n# This program is distributed in the hope that it will be useful,                                          #\n# but WITHOUT ANY WARRANTY; without even the implied warranty of                                           #\n# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the                                            #\n# GNU General Public License for more details.                                                             #\n#                                                                                                          #\n# You should have received a copy of the GNU General Public License                                        #\n# along with this program; If not, see <http://www.gnu.org/licenses/>.                                     #\n############################################################################################################\n\n\n##################################################################\n# Search for the place of a number into a big ordered number list.\n# Return the indice after which we can range the number\n# Return -1 if number < [lindex $ListeOrdonnee 0]\n##################################################################\nproc DichotomySearch {number OrderedNumberList} {\n    set i 0\n    set j [expr {[llength $OrderedNumberList]-1}]\n    if {$number<[lindex $OrderedNumberList 0]} {return -1}\n    if {$number>=[lindex $OrderedNumberList $j]} {return $j}\n    set k [expr {($i+$j)/2}]\n    \n    if {$number<[lindex $OrderedNumberList $k]} {set j $k} else {set i $k}\n    while {[expr {$j-$i}] > 1} {\n        set k [expr {($i+$j)/2}]\n        if {$number<[lindex $OrderedNumberList $k]} {set j $k} else {set i $k}\n    }\n    return $i\n}\n\n\n##################################################################\n# Prepare 5 new annotation columns:\n# - Number of homozygous SNV/indel detected in the sample and located in the SV --- $countHom($sample)\n# - Number of heterozygous SNV/indel detected in the sample and  located in the SV --- $countHtz($sample)\n# - Ratio of htz / Hom ---  $HtzHomRatio\n# - Ratio of htz / Total --- $HtzTotRatio\n# - Total number of calls detected in all samples and located in the SV --- $totalCount\n##################################################################\nproc VCFannotation {SVchrom SVstart SVend SVtype} {\n    \n    global g_AnnotSV\n    global lPos\n    global L_allSamples\n    \n    ## VCFs parsing is done only 1 time (After, g_AnnotSV(vcfParsing) is set to \"done\")\n    if {![info exists g_AnnotSV(vcfParsing)]} {\n        \n        set g_AnnotSV(vcfParsing) \"done\"\n        \n        # parsing of $g_AnnotSV(snvIndelFiles): creation of lPos($SVchrom,htz,sample), lPos($SVchrom,hom,sample) and lPos($SVchrom,tot,cohort)\n        puts \"\\n\\n...parsing of snvIndelFiles for \\\"$g_AnnotSV(snvIndelSamples)\\\" ([clock format [clock seconds] -format \"%B %d %Y - %H:%M\"])\"\n        \n        # \"eval glob\" accept regular expression (\"*.vcf\") as well as a list of files (\"sample1.vcf sample2.vcf.gz\"):\n        set L_allSamples {}\n        foreach vcfF [eval glob -nocomplain $g_AnnotSV(snvIndelFiles)] {\n            \n            # Split multiallelic sites into multiple rows\n            puts \"\\t...split multiallelic sites into multiple rows for $vcfF ([clock format [clock seconds] -format \"%B %d %Y - %H:%M\"])\"\n            set tmpVCF1 \"$g_AnnotSV(outputDir)/[file tail $vcfF].[clock seconds].separate.vcf\"\n            set tmpVCFgz1 \"$g_AnnotSV(outputDir)/[file tail $vcfF].[clock seconds].separate.vcf.gz\"\n            catch {eval exec $g_AnnotSV(bcftools) norm -m -both $vcfF > $tmpVCF1} Message\n            \n            if {[file size $tmpVCF1] eq 0} {\n                # we continue AnnotSV without splitting the multiallelic sites!\n                puts \"\\t   -- VCFannotation --\"\n                puts \"\\t   $g_AnnotSV(bcftools) norm -m -both $vcfF > $tmpVCF1\"\n                puts \"\\t   $tmpVCF1: file empty.\"\n                foreach line [split $Message \"\\n\"] {\n                    if {[regexp -nocase \"error|fail\" $line]} {puts \"\\t   $line\"}\n                }\n                puts \"\\t   => No multiallelic treatment done.\"\n                if {[regexp -nocase \".gz$\" $vcfF]} {\n                    file copy -force $vcfF $tmpVCFgz1\n                } else {\n                    catch {eval exec cat $vcfF | gzip > $tmpVCFgz1} Message\n                }\n            } elseif {[regexp -nocase \"error|fail\" $Message]} {\n                # we continue AnnotSV without splitting the multiallelic sites !\n                puts \"\\t   -- VCFannotation --\"\n                puts \"\\t   $g_AnnotSV(bcftools) norm -m -both $vcfF > $tmpVCF1\"\n                foreach line [split $Message \"\\n\"] {\n                    if {[regexp -nocase \"error|fail\" $line]} {puts \"\\t   $line\"}\n                }\n                puts \"\\t   => No multiallelic treatment done.\"\n                if {[regexp -nocase \".gz$\" $vcfF]} {\n                    file copy -force $vcfF $tmpVCFgz1\n                } else {\n                    catch {eval exec cat $vcfF | gzip > $tmpVCFgz1} Message\n                }\n            } else {\n                catch {eval exec gzip $tmpVCF1} Message\n            }\n            file delete -force $tmpVCF1\n            \n            # Parsing of $vcfF\n            puts \"\\t...parsing of $vcfF ([clock format [clock seconds] -format \"%B %d %Y - %H:%M\"])\"\n            set iIntersect 0\n            set iSV 0\n            set iLoaded 0\n            set iNotPASS 0\n            set iNotGT 0\n            \n            # VCF should not contain \"chr\" prefix\n            regsub \".vcf.gz$\" $tmpVCFgz1 \".withoutChr.vcf.gz\" tmpVCFgz2\n            catch {exec gunzip -c $tmpVCFgz1 | grep -c \"^chr\"} Message\n            if {[string index $Message 0] ne 0} {\n                exec gunzip -c $tmpVCFgz1 | sed \"s/^chr//\" | gzip > $tmpVCFgz2\n            } else {\n                set tmpVCFgz2 \"$tmpVCFgz1\"\n            }\n            \n            # Header for the intersection with the SV bedfile\n            regsub \".vcf.gz$\" $tmpVCFgz2 \".intersect.vcf.gz\" tmpVCFgz3\n            regsub \".gz$\" $tmpVCFgz3 \"\" tmpVCF3\n            set f [open \"| gzip -cd $tmpVCFgz2\"]\n            set L_tmpVCF_Header {} ; # Header is used to find \"samples\" columns names\n            while {! [eof $f]} {\n                set L [gets $f]\n                if {[regexp \"^#\" $L]} {\n                    set L_tmpVCF_Header $L\n                } else {\n                    break\n                }\n            }\n            unset f\n            lappend L_allSamples {*}[lrange $L_tmpVCF_Header 9 end]\n            WriteTextInFile \"$L_tmpVCF_Header\" $tmpVCF3\n            if {[catch {exec gzip $tmpVCF3} Message]} { ; #creation of $tmpVCFgz3\n                puts \"-- VCFannotation --\"\n                puts \"gzip $tmpVCF3\"\n                puts $Message\n            }\n            \n            # Intersect with the bedfile\n            if {[catch {exec gunzip -c $tmpVCFgz2 | $g_AnnotSV(bedtools) intersect -a stdin -b $g_AnnotSV(bedFile) > $tmpVCF3} Message]} {\n                if {[regexp -nocase \"error\" $Message]} {\n                    WriteTextInFile \"$Message\" $tmpVCF3.error\n                    puts \"-- VCFannotation --\"\n                    puts \"gunzip -c $tmpVCFgz2 | $g_AnnotSV(bedtools) intersect -a stdin -b $g_AnnotSV(bedFile) > $tmpVCF3\"\n                    puts \"Error: look at $tmpVCF3.error\"\n                }\n            }\n            \n            # Nettoyage\n            file delete -force $tmpVCFgz1\n            file delete -force $tmpVCFgz2\n            \n            if {[file size $tmpVCF3] eq 0} {\n                # no intersection between the bed and the VCF, no SNV/Indel to load in memory\n                puts \"\\t\\t-> no variant in the intersection\"\n                file delete -force $tmpVCF3\n                file delete -force $tmpVCFgz3\n                continue\n            } else {\n                if {[catch {exec cat $tmpVCF3 | gzip >> $tmpVCFgz3} Message]} {\n                    puts \"-- VCFannotation --\"\n                    puts \"cat $tmpVCF3 | gzip >> $tmpVCFgz3\"\n                    puts $Message\n                }\n                file delete -force $tmpVCF3\n            }\n            \n            # load SNV/Indel in memory\n            set f [open \"| gzip -cd $tmpVCFgz3\"]\n            set L_samples1VCF {}\n            while {![eof $f]} {\n                set L [gets $f]\n                set Ls [split $L \"\\t\"]\n                \n                if {[string range $L 0 5] eq \"#CHROM\"} {\n                    set L_samples1VCF [lrange $Ls 9 end]\n                    set k 9\n                    foreach sample [lrange $Ls 9 end] {\n                        set i_sample($sample) $k\n                        incr k\n                    }\n                    continue\n                }\n                if {[string index $L 0] eq \"#\" || $L eq \"\"} {continue}\n                \n                incr iIntersect\n                \n                # set the variables\n                set Ls [split $L \"\\t\"]\n                set chrom  [lindex $Ls 0]\n                regsub -nocase \"chr\" $chrom \"\" chrom\n                set pos    [lindex $Ls 1]\n                \n                # Consider only the SNV/indel (not the SV in the VCF file)\n                ##########################################################\n                # Example of SV:\n                # - Type1: ref=\"G\" and alt=\"ACTGCTAACGATCCGTTTGCTGCTAACGATCTAACGATCGGGATTGCTAACGATCTCGGG\"\n                # - Type2: \"<INS>\", \"<DEL>\", ...\n                # - Type3: complex rearrangements with breakends: \"G]17:1584563]\"\n                set ref [lindex $Ls 3]\n                set alt [lindex $Ls 4]\n                if {[regexp \"<|\\\\\\[|\\\\\\]\" $alt]} {incr iSV; continue}; # it is an SV\n                set variantLength [expr {[string length $ref]-[string length $alt]}]\n                if {[expr {abs($variantLength)}]>$g_AnnotSV(SVminSize)} {incr iSV; continue}; # it is an SV\n                \n                set filter [lindex $Ls 6]\n                set formatData [lindex $Ls 8]\n                set j_GT [lsearch -exact [split $formatData \":\"] \"GT\"]\n                if {$j_GT eq -1} {incr iNotGT; continue}\n                \n                # keep only variant with FILTER == PASS\n                if {$g_AnnotSV(snvIndelPASS) && $filter ne \"PASS\"} {incr iNotPASS; continue}\n                incr iLoaded\n                \n                foreach sample $L_samples1VCF {\n                    set sampleData [lindex $Ls $i_sample($sample)]\n                    # set the GT\n                    set GTsample [lindex [split $sampleData \":\"] $j_GT]\n                    set GTsample [split $GTsample \"/|\\\\|\"]\n                    set GTsampleA [lindex $GTsample 0]\n                    set GTsampleB [lindex $GTsample 1]\n                    if {$GTsampleA eq \"\" || $GTsampleB eq \"\"} {continue}\n                    if {$GTsampleA eq \"0\" && $GTsampleB eq \"0\"} {continue}\n                    if {[lindex $GTsample 0] ne [lindex $GTsample 1]} {set GT \"htz\"} else {set GT \"hom\"}\n                    # set the lPos($chrom,$GT,$sample)\n                    lappend lPos($chrom,$GT,$sample) $pos\n                }\n                if {[info exists i_samples]} {\n                    unset i_samples\n                }\n            }\n            close $f\n            file delete -force $tmpVCFgz3\n            if {$iIntersect} {\n                puts \"\\t\\t-> $iIntersect SNV/indel located in all the SV (potentially with redundancy depending on SV overlap)\"\n            }\n            if {$iLoaded} {\n                puts \"\\t\\t-> $iLoaded SNV/indel loaded\"\n            }\n            if {$iSV} {\n                puts \"\\t\\t-> $iSV SV excluded (considering only SNV/indel from the VCF)\"\n            }\n            if {$iNotPASS} {\n                puts \"\\t\\t-> $iNotPASS SNV/indel excluded because of the FILTER value not equal to \\\"PASS\\\"\"\n            }\n            if {$iNotGT} {\n                puts \"\\t\\t-> $iNotGT SNV/indel excluded because of the absence of GT information\"\n            }\n        }\n    }\n    \n    set textToReturn {}\n    set lPosTotInTheCohort {}\n    foreach sample $L_allSamples {\n        # Count for hom variants\n        set countHom($sample) 0\n        if {[info exists lPos($SVchrom,hom,$sample)]} {\n            set i_first [DichotomySearch $SVstart $lPos($SVchrom,hom,$sample)]\n            set i_last [DichotomySearch $SVend $lPos($SVchrom,hom,$sample)]\n            if {$SVstart ne [lindex $lPos($SVchrom,hom,$sample) $i_first]} {set i_first [expr {$i_first+1}]}\n            set L_posHom [lsort -unique [lrange $lPos($SVchrom,hom,$sample) $i_first $i_last]]\n            set countHom($sample) [llength $L_posHom]\n            lappend lPosTotInTheCohort {*}$L_posHom\n        }\n        # Count for htz variants\n        set countHtz($sample) 0\n        if {[info exists lPos($SVchrom,htz,$sample)]} {\n            set i_first [DichotomySearch $SVstart $lPos($SVchrom,htz,$sample)]\n            set i_last [DichotomySearch $SVend $lPos($SVchrom,htz,$sample)]\n            if {$SVstart ne [lindex $lPos($SVchrom,htz,$sample) $i_first]} {set i_first [expr {$i_first+1}]}\n            set L_posHtz [lsort -unique [lrange $lPos($SVchrom,htz,$sample) $i_first $i_last]]\n            set countHtz($sample) [llength $L_posHtz]\n            lappend lPosTotInTheCohort {*}$L_posHtz\n        }\n    }\n    set lPosTotInTheCohort [lsort -unique $lPosTotInTheCohort]\n    set totalCount [llength $lPosTotInTheCohort]\n    \n    \n    if {[regexp \"DEL\" [normalizeSVtype $SVtype]]} {\n        if {$totalCount>50} {\n            set textToReturn \"\"\n            foreach sample $g_AnnotSV(snvIndelSamples) {\n                # Count for hom variants (Hom + WT hom)\n                set CountAllHom [expr {$totalCount-$countHtz($sample)}]\n                # htz/AllHom\n                if {$CountAllHom eq 0} {\n                    set HtzHomRatio \"NA\"\n                } else {\n                    set HtzHomRatio [format \"%.4f\" [expr {$countHtz($sample)*1.0/$CountAllHom}]]\n                }\n                # htz(sample)/total(cohort)\n                if {$totalCount eq 0} {\n                    set HtzTotRatio \"NA\"\n                } else {\n                    set HtzTotRatio [format \"%.4f\" [expr {$countHtz($sample)*1.0/$totalCount}]]\n                }\n                append textToReturn \"$countHom($sample)\\t$countHtz($sample)\\t$HtzHomRatio\\t$HtzTotRatio\\t\"\n            }\n            append textToReturn \"$totalCount\"\n        } else {\n            foreach sample $g_AnnotSV(snvIndelSamples) {\n                append textToReturn \"$countHom($sample)\\t$countHtz($sample)\\tNA\\tNA\\t\"\n            }\n            append textToReturn \"$totalCount\"\n        }\n    } else {\n        foreach sample $g_AnnotSV(snvIndelSamples) {\n            append textToReturn \"NA\\tNA\\tNA\\tNA\\t\"\n        }\n        append textToReturn \"NA\"\n    }\n    \n    return \"$textToReturn\"\n}\n\n\nproc VCFsToBED {SV_VCFfiles} {\n    \n    global g_AnnotSV\n    global VCFheader\n    global g_SVLEN\n    global g_ID\n    global g_deb\n    \n    \n    ## BED: 0-based, non-inclusive-end [startFromBED, endFromBED[\n    ## VCF: 1-based, inclusive-end [startFromBED+1, endFromBED]\n    \n    ## It is to notice in the VCF specification:\n    ## - For imprecise structural variants (i.e. symbolic allele with bracketed notation; e.g. <DUP>):\n    ##   END = POS + length of REF allele\n    ## - For precise structural variants (e.g. ref=\"G\" and alt=\"ACTGCTA):\n    ##   END = POS + length of REF allele - 1\n    \n    set SV_BEDfile \"$g_AnnotSV(outputDir)/[clock format [clock seconds] -format \"%Y%m%d-%H%M%S\"]_[pid]_AnnotSV_inputSVfile.bed\"\n    file delete -force \"$SV_BEDfile\"\n    set VCFheader \"\"\n    # Variants from the input file that are not annotated by AnnotSV are reported in $unannotatedOutputFile\n    if {[regexp \"annotated\" $g_AnnotSV(outputDir)/$g_AnnotSV(outputFile)]} {\n        regsub \"annotated\" $g_AnnotSV(outputDir)/$g_AnnotSV(outputFile) \"unannotated\" unannotatedOutputFile\n    } else {\n        regsub \".tsv$\" $g_AnnotSV(outputDir)/$g_AnnotSV(outputFile) \".unannotated.tsv\" unannotatedOutputFile\n    }\n    file delete -force $unannotatedOutputFile\n    \n    foreach VCFfile $SV_VCFfiles {\n        puts \"...VCF to BED ([clock format [clock seconds] -format \"%B %d %Y - %H:%M\"])\"\n        set L_TextToWrite {}\n        set L_squBrack_SV_ID_Written {}\n        \n        if {[regexp -nocase \".gz$\" $VCFfile]} {\n            set f [open \"| gzip -cd $VCFfile\"]\n        } else {\n            set f [open \"$VCFfile\"]\n        }\n        \n        set i 0\n        set VCFheaderNotPresent 1\n        \n        # Check if the GT feature is present for at least 1 variant\n        #\n        # GT info:\n        # - 0/1 and 1/0 functionally mean the same thing (that the individual is a heterozygote) - since the genotype is unphased, the alleles aren't ordered.\n        #   The / symbol tells you the genotype is unphased.\n        #   The convention is to write the GT field in ascending order, so 0/1 rather than 1/0\n        # - 0|1 and 1|0 do mean something different, since the pipe symbol \"|\" tell us the order of the alleles matters\n        # - ”.” must be specified for each missing allele in the GT field (for example ./.) (=> if a call cannot be made for a sample at a given locus)\n        #\n        # In the code:\n        # - if g_AnnotSV(missingGTinSamplesid) set to 1 (default):\n        #\t=> Sample ID with GT \"./.\" or \".|.\" (unknown GT) are reported in the \"Samples_ID\" output column\n        # - if g_AnnotSV(missingGTinSamplesid) set to 0:\n        #   => Sample ID with GT \"./.\" or \".|.\" (unknown GT) are NOT reported in the \"Samples_ID\" output column\n        set GTabsent 1; #To check if the “GT” field is indicated in the FORMAT column\n        \n        set VCFlineNumber 0\n        set nUnknownGT 0; # Number of Samples with unknown GT for an SV\n        \n        while {![eof $f]} {\n            \n            if {$i eq \"500000\"} {\n                WriteTextInFile [join $L_TextToWrite \"\\n\"] $SV_BEDfile\n                set L_TextToWrite {}\n                set i 0\n            }\n            \n            set L [gets $f]\n            set Ls [split $L \"\\t\"]\n            incr VCFlineNumber\n            if {[string index $L 0] eq \"#\" || $L eq \"\"} {\n                if {[regexp \"^#CHROM\" $L]} {\n                    # Check if this header is complete\n                    foreach classicValue {#CHROM POS ID REF ALT QUAL FILTER INFO FORMAT} {\n                        if {[lsearch -exact $Ls $classicValue] eq -1} {\n                            puts \"VCF header file badly formatted:\"\n                            puts $L\n                            puts \"($classicValue not present)\"\n                            puts \"Exit with error\"\n                            exit 2\n                        }\n                    }\n                    set VCFheaderNotPresent 0\n                    #CHROM  POS     ID      REF     ALT     QUAL    FILTER  INFO    FORMAT  HG00096\n                    if {$g_AnnotSV(SVinputInfo)} {\n                        set VCFheader \"SV_type\\tSamples_ID\\t[join [lrange $Ls 2 end] \"\\t\"]\"\n                    } else {\n                        set VCFheader \"SV_type\\tSamples_ID\\t[join [lrange $Ls 3 4] \"\\t\"]\\t[join [lrange $Ls 8 end] \"\\t\"]\"\n                    }\n                    set L_allSamples [lrange $Ls 9 end]\n                }\n                continue\n            }\n            incr i\n            \n            if {$VCFheaderNotPresent} {\n                set VCFheaderNotPresent 0\n                puts \"ERROR:\\n$VCFfile: no VCF header line (prefixed with \\\"#CHROM\\\"). Check your VCF.\"\n                puts \"Exit with error\\n\"\n                exit 2\n            }\n            \n            # Consider only the SV (not the SNV/indel)\n            ##########################################\n            # Example of SV:\n            # - Type1: ref=\"G\" and alt=\"ACTGCTAACGATCCGTTTGCTGCTAACGATCTAACGATCGGGATTGCTAACGATCTCGGG\" (length > 50bp)\n            # - Type2: alt=\"<INS>\", \"<DEL>\", \"<TRA>\"...\n            # - Type3: squared-bracketed SV notation: alt=\"G]17:1584563]\" or alt=\"G]chr17:1584563]\" (length > 50bp)\n            #          (developed with the assistance and guidance of Rodrigo Martin, BSC, Spain)\n            set BNDrescue 0 ;# The ALT of a rescue BND is not square-bracketed anymore\n            set TRArescue 0\n            set SquareBracketedSV 0\n            set chrom [lindex $Ls 0]\n            regsub -nocase \"chr\" $chrom \"\" chrom\n            set posVCF [lindex $Ls 1]\n            set pos [expr {$posVCF-1}]; # VCF: 1-based ==> BED: 0-based\n            regsub \"chr\" [lindex $Ls 3] \"\" ref ; # for alt like: \"alt=\"G]chr17:1584563]\"\n            regsub \"chr\" [lindex $Ls 4] \"\" alt\n            set altVCF $alt ;# To use with the proc \"settingOfTheAnnotSVID\" (because alt is modified if it is a square-bracketed notation)\n            set refVCF $ref\n            regsub \"CHR2=chr\" $Ls \"CHR2=\" Ls\n            regsub -all \"\\\"\" [lindex $Ls 7] \"\" INFOcol\n            set svlen \"\"; set end \"\"; set svtype \"\"; set cipos \"\"; set ciend \"\"; set chr2 \"\"; set cipos95 \"\"; set ciend95 \"\"\n            if {[regexp \"SVLEN=(\\[0-9-\\]+)\" $INFOcol match SVLEN]} {set svlen $SVLEN}\n            if {[regexp \";END=(\\[0-9\\]+)\" $INFOcol match END] || [regexp \"^END=(\\[0-9\\]+)\" $INFOcol match END]} {set end $END}\n            if {[regexp \"SVTYPE=(\\[^;\\]+)\" $INFOcol match SVTYPE]} {set svtype $SVTYPE}\n            if {[regexp \"CIPOS=(\\[^;\\]+)\" $INFOcol match CIPOS]} {set cipos $CIPOS}\n            if {[regexp \"CIEND=(\\[^;\\]+)\" $INFOcol match CIEND]} {set ciend $CIEND}\n            if {[regexp \"CHR2=(\\[^;\\]+)\" $INFOcol match CHR2]} {set chr2 $CHR2} ;# Translocation\n            if {[regexp \"CIPOS95=(\\[^;\\]+)\" $INFOcol match CIPOS95]} {set cipos95 $CIPOS95}\n            if {[regexp \"CIEND95=(\\[^;\\]+)\" $INFOcol match CIEND95]} {set ciend95 $CIEND95}\n            if {[regexp \"^<\" $alt]} {\n                # Type2: angle-bracketed notation <...>\n                \n                if {$end eq \"\"} {\n                    # INS:ME (\"LINE1\", \"ALU\", \"SVA\", \"BND\" or \"TRA without mate_id\")\n                    set end $posVCF\n                }\n                \n                if {[regexp \"<TRA>\" $alt]} {\n                    # Example of a translocation VCF format line:\n                    # chr1   63705386   N    .     <TRA>   51      PASS    \"PRECISE;CT=5to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;SVTYPE=TRA;CHR2=chrX;END=478444;SVLEN=0\"        GT      ./.\n                    # POS = 63705386 --> sur chrom1\n                    # END = 478444   --> sur chromX\n                    ## => annotation should consider only this breakpoint on chr1 (not the BND on chrX because the SVINFO features are specific to this BND on chr1, not to the other one on chrX)\n                    \n                    #2       321682  tra_a   T       <TRA>   .       PASS    SVTYPE=BND;CHR2=13;END=123456  GT      0/0     0/1\n                    set end $posVCF\n                    set svtype \"TRA\"\n                    set svlen 0\n                    # Processing the alt of the TRA (in case of having 2 TRA with the same \"start\" but different \"end\"):\n                    # \"alt\" => \"alt_CHR2_END\"\n                    #\n                    # Example:\n                    # Two translocations that start at the same position, but both ENDs are different:\n                    #    chrX  83731873  .  T   <TRA>   46    .   CHR2=chr1;CIEND=-563,563;CIPOS=-563,563;END=102454994;SVLEN=1;SVTYPE=TRA    GT:PE:SR    0/1:7,2:0,0\n                    #    chrX  83731873  .  T   <TRA>   69    .   CHR2=chr1;CIEND=-563,563;CIPOS=-563,563;END=111581087;SVLEN=1;SVTYPE=TRA    GT:PE:SR    0/1:6,3:0,0\n                    # => alt: <TRA>_chr1_102454994 and <TRA>_chr1_111581087\n                    # => This will permit to obtain 2 different AnnotSV_ID for the 1st breakend: X_83731310_83732436_TRA_1 and X_83731310_83732436_TRA_2\n                    if {$chr2 ne \"\"} { ;# Some TRA do not have mate_id\n                        set alt \"<TRA>_${chr2}_$end\"\n                        #set altVCF $alt\n                        lset Ls 4 \"$alt\"\n                    }\n                } else {\n                    # First, we've choosen the SVTYPE in the INFO column (done above with the parsing of INFOcol).\n                    # Second, we re-set with the SVtype in the ALT column (if exist).\n                    set svtypeALT \"\"\n                    if {[regexp \"^<(.+)>$\" $alt match svtypeALT]} {\n                        set svtypeALT [normalizeSVtype $svtypeALT] ;# DEL or DUP or INS or INV or \"\"\n                    }\n                    if {$svtypeALT != \"\"} {\n                        set svtype $svtypeALT\n                    } else {\n                        set svtype [normalizeSVtype $svtype] ;# DEL or DUP or INS or INV or \"\"\n                    }\n                    \n                    # Processing the alt of the INS (in case of having 2 INS with the same \"pos\" but with different \"seq\" and/or \"svlen\"):\n                    # \"alt\" => \"alt_INSSEQ\" ou \"alt_svlen\"\n                    #\n                    # Example:\n                    # Two insertions at the same position, but with different inserted sequences:\n                    #    chr18   1963003 aa .   <INS>   19    PASS    SVTYPE=INS;CHR2=chr18;END=1963003;SVINSSEQ=ATGTGTAATGCCGTATGCTTGTAATGCCGTATGCTTGTAATGCCGTATGCTTGAAAACCGT        GT      0/1\n                    #    chr18   1963003 xx .   <INS>   50    PASS    SVTYPE=INS;CHR2=chr18;END=1963003;SVINSSEQ=ATGCTTGTAATGCCGTATGCTTGTAATGCCGTATGCTTGTAATGCCGTATGCTTGTAATGCCGT     GT      0/1\n                    # Two insertions at the same position, but with different lengths\n                    #    chr18   1963003 cuteSV.INS.4743 .       <INS>   19      PASS    SVLEN=1512;SVTYPE=INS;CHR2=chr18;END=1963003    GT      0/1\n                    #    chr18   1963003 cuteSV.INS.4744 .       <INS>   50      PASS    SVLEN=51;SVTYPE=INS;CHR2=chr18;END=1963003      GT      0/1\n                    # => This will permit to obtain 2 different AnnotSV_ID: chr18_1963003_1963003_INS_1 and chr18_1963003_1963003_INS_2\n                    \n                    # INS, INSERTED_SEQUENCE, SVINSSEQ, INSSEQ, SEQ, CONSENSUS\n                    if {$svtype == \"INS\"} {\n                        if {[regexp \"(INS|INSERTED_SEQUENCE|INSSEQ|SEQ|CONSENSUS)=(\\[acgtnACGTN\\]+)\" $INFOcol match tutu INSSEQ]} {\n                            append alt \"_$INSSEQ\"\n                        } elseif {$svlen ne \"\"} {\n                            append alt \"_$svlen\"\n                        }\n                        #set altVCF $alt\n                        lset Ls 4 \"$alt\"\n                    }\n                }\n                \n                if {$svlen eq \"\" && $end ne \"\"} {\n                    if {$svtype eq \"DEL\"} {\n                        set svlen [expr {$posVCF-$end}]\n                    } elseif {[regexp \"DUP|INV\" $svtype]} {\n                        set svlen [expr {$end-$posVCF}]\n                    }\n                }\n                \n                # Check the SVminSize for DUP, DEL and INS\n                if {$svlen ne \"\" && ($svtype eq \"DUP\" || $svtype eq \"DEL\" || $svtype eq \"INS\")} {\n                    if {[expr {abs($svlen)}]<$g_AnnotSV(SVminSize)} {\n                        # it is a small variant\n                        WriteTextInFile \"${chrom}_${posVCF}_${end}_${svtype}_${ref}_${altVCF}: variantLength ([expr {abs($svlen)}]) < SVminSize ($g_AnnotSV(SVminSize)) (line $VCFlineNumber)\" $unannotatedOutputFile\n                        continue\n                    }\n                }\n                \n            } elseif {[regexp \"(\\[acgtnACGTN\\]*)(\\\\\\[|\\\\\\])(\\[^:\\]+):(\\[0-9\\]+)(\\\\\\[|\\\\\\])(\\[acgtnACGTN\\]*)\" $alt match baseLeft bracketLeft inBracketChrom inBracketStart bracketRight baseRight]} {\n                # Type3: square-bracketed notation ]...]\n                # => Developed with the assistance and guidance of Rodrigo Martin, BSC, Spain\n                \n                # An SV is described with 2 BND.\n                #\n                # With bracketed notation, we have 1 line in the VCF for each breakend (=> 2 lines)\n                # => Default: It corresponds to only 1 line in the BED file, except for translocation (where both breakends are annotated)\n                \n                # Rules applied here:\n                # - DUP, DEL, INS, INV: In the BND pair of an SV, we keep the line whith pos_POS < pos_ALT.\n                #                  The other line (pos_POS > pos_ALT) is only used for BND rescue (not written in the BED file)\n                #                  BND rescue:\n                #                       - The ALT of a recovered BND is not square-bracketed anymore but angle-bracketed\n                #                       - The REF is set to \"N\"\n                # - TRA: Both breakpoints lines are written in the BED file.\n                \n                set SquareBracketedSV 1\n                if {$chrom != $inBracketChrom} {\n                    # TRA (chrom_#CHROM != chrom_ALT)\n                    #################################\n                    \n                    # Example:\n                    # 17      198982  trn_no_mateid_a A       A]2:321681]\t=> Line analysed by AnnotSV\n                    # 2       321681  trn_no_mateid_b G       G]17:198982]\t=> Line analysed by AnnotSV\n                    # (INFO: Can not have a translocation on the same chrom. A translocation on the same chrom is always represented with another thing: DUP, INV or DEL)\n                    #        Can not rescue the orientation of the square-brackets from one BND to the paired BND (\"]\" or \"[\") => for the rescue: ALT = <TRA>\n                    set ref \"N\"\n                    set end $posVCF\n                    set svtype \"TRA\"\n                    set svlen 0\n                    \n                    set TRArescue 1\n                    #set altVCF2 \"<TRA>\"\n                    set chrom2 $inBracketChrom\n                    set pos2 [expr {$inBracketStart-1}]; # VCF: 1-based ==> BED: 0-based\n                    set posVCF2 $inBracketStart\n                    set end2 $inBracketStart\n                    set INFOcol2 \"$INFOcol;BNDrescue\"\n                    set altVCF2 \"N]$chrom:$posVCF]\"\n                    \n                    # #CHROM  POS     ID      REF     ALT     QUAL    FILTER  INFO    FORMAT  sample1  sample2\n                    set L2 \"$chrom2\\t$posVCF2\\t[lindex $Ls 2]\\t$ref\\t$altVCF2\\t[join [lrange $Ls 5 6] \"\\t\"]\\t$INFOcol2\\t[join [lrange $Ls 8 end] \"\\t\"]\"\n                    set L2s [split $L2 \"\\t\"]\n                    #regsub -all \"\\\\\\\\\" $L2s \"\" L2s\n                    regsub -all {\\\\} $L2s {} L2s\n                    \n                } else {\n                    \n                    # If not TRA, check if the line corresponds to the 2d breakend of an SV pair\n                    ############################################################################\n                    if {$posVCF > $inBracketStart} {\n                        # Lines only used for BND rescue\n                        \n                        # DUP, DEL, INS and INV: We first look at the lines whith pos_POS < pos_ALT\n                        # => Here, we search for the reciprocal breakend in case of rescue needed\n                        \n                        # With one breakend, you can always infer the other. Indeed, the only thing that could be different from the mate breakend is\n                        # its CIPOS INFO field (but it should be provided in the CIEND field of the other breakend).\n                        # Regarding GT, both breakends must have the same GT because they represent the same thing.\n                        # The CIEND/CIPOS relationship is that you can use the CIEND info from the breakend you already have to set the CIPOS field of the new \"inferred\" breakend.\n                        \n                        set BNDrescue 1; # The other BND from this BND pair can be recovered here\n                        \n                        set remember $posVCF\n                        set posVCF $inBracketStart\n                        set inBracketStart $remember\n                        set pos [expr {$posVCF-1}]; # VCF: 1-based ==> BED: 0-based\n                        \n                        # Modif in $INFOcol: Correction of the CIPOS, CIEND...\n                        #                    Add \"BNDrescue\"\n                        set remember $cipos\n                        set cipos $ciend\n                        set ciend $remember\n                        regsub \"CIPOS=\\[^;\\]+\" $INFOcol \"CIPOS=$cipos\" INFOcol\n                        regsub \"CIEND=\\[^;\\]+\" $INFOcol \"CIEND=$ciend\" INFOcol\n                        set remember $cipos95\n                        set cipos95 $ciend95\n                        set ciend95 $remember\n                        regsub \"CIPOS95=\\[^;\\]+\" $INFOcol \"CIPOS95=$cipos95\" INFOcol\n                        regsub \"CIEND95=\\[^;\\]+\" $INFOcol \"CIEND95=$ciend95\" INFOcol\n                        append INFOcol \";BNDrescue\"\n                        \n                        # INS rescue\n                        if {[string length $baseLeft] > 1} {\n                            regsub -nocase \"^$ref\" $baseLeft \"\" baseLeft\n                            set baseLeft \"${baseLeft}N\"\n                        } elseif {[string length $baseRight] > 1} {\n                            regsub -nocase \"$ref$\" $baseRight \"\" baseRight\n                            set baseRight \"N${baseRight}\"\n                        } elseif {[string length $baseLeft] == 1} {\n                            set baseLeft \"N\"\n                        } elseif {[string length $baseRight] == 1} {\n                            set baseRight \"N\"\n                        }\n                        \n                        set ref \"N\"\n                        set remember $baseLeft\n                        set baseLeft $baseRight\n                        set baseRight $remember\n                        if {$bracketLeft == \"\\[\"} {\n                            set bracketLeft \"\\]\"\n                            set bracketRight \"\\]\"\n                        } else {\n                            set bracketLeft \"\\[\"\n                            set bracketRight \"\\[\"\n                        }\n                        set alt \"$baseLeft$bracketLeft${inBracketChrom}:$inBracketStart$bracketRight$baseRight\"\n                        #set altVCF $alt\n                        \n                        # #CHROM  POS     ID      REF     ALT     QUAL    FILTER  INFO    FORMAT  sample1  sample2\n                        set L \"$chrom\\t$posVCF\\t[lindex $Ls 2]\\t$ref\\t$altVCF\\t[join [lrange $Ls 5 6] \"\\t\"]\\t$INFOcol\\t[join [lrange $Ls 8 end] \"\\t\"]\"\n                        set Ls [split $L \"\\t\"]\n                    }\n                    \n                    \n                    # Now, we look successively at the INS, DUP, INV then DEL\n                    #########################################################\n                    # in order to define: svlen, svtype, end and alt\n                    # and to check/write the unannotated SV\n                    \n                    if {([string length $baseLeft] > 1 || [string length $baseRight] > 1) && $inBracketStart == [expr {$posVCF+1}]} {\n                        # INS (\"first mapped base\" is followed by the inserted sequence)\n                        # -> number of bases indicated in ALT > 1\n                        # -> END = POS + 1\n                        ################################################################\n                        # Example:\n                        # 13      53040041        ins_by_gridss   T       TATATATATACACAC[13:53040042[\t=> Line analysed by AnnotSV\n                        # 13      53040042        ins_by_gridss   A       ]13:53040041]ATATATATACACACA\t=> Line NOT reported by AnnotSV (if the previous BND has already been analysed)\n                        if {[string length $baseLeft] > 1 } {\n                            regsub -nocase \"^$ref\" $baseLeft \"\" insertedseq\n                        } elseif {[string length $baseRight] > 1} {\n                            regsub -nocase \"$ref$\" $baseRight \"\" insertedseq\n                        }\n                        set svlen [string length $insertedseq]\n                        \n                        set svtype \"INS\"\n                        set end $posVCF\n                        #set alt \"<INS>\"\n                        if {$svlen<$g_AnnotSV(SVminSize)} {\n                            # it is an indel\n                            WriteTextInFile \"${chrom}_${posVCF}_${end}_${svtype}_${ref}_${altVCF}: variantLength ($svlen) < SVminSize ($g_AnnotSV(SVminSize)) (line $VCFlineNumber)\" $unannotatedOutputFile\n                            continue\n                        }\n                        if {![regexp \"INS|ALL\" $g_AnnotSV(bracketedAltMode)] || $svlen > [expr {$g_AnnotSV(bracketedAltMaxSize)*1000000}]} {\n                            set svlen 0\n                            set svtype \"BND\"\n                            set end $posVCF\n                        }\n                        \n                        #set altVCF $alt\n                        lset Ls 4 \"$alt\"\n                        \n                    } elseif {$bracketRight eq \"]\" && $baseRight ne \"\"} {\n                        # DUP (\"first mapped base\" is NOT contained in the bracket: \"N[\" or \"]N\"; REF is after the brackets\n                        ###################################################################################################\n                        # Example:\n                        # 2       3000    breakend_dup_a  T       ]2:5000]T  \t=> Line analysed by AnnotSV\n                        # 2       5000    breakend_dup_b  T       T[2:3000[ \t=> Line NOT reported by AnnotSV (if the previous BND has already been analysed)\n                        set svlen [expr {$inBracketStart-$posVCF}]\n                        set svtype \"DUP\"\n                        set end $inBracketStart\n                        if {$svlen<$g_AnnotSV(SVminSize)} {\n                            # it is an indel\n                            WriteTextInFile \"${chrom}_${posVCF}_${end}_${svtype}_${ref}_${altVCF}: variantLength ($svlen) < SVminSize ($g_AnnotSV(SVminSize)) (line $VCFlineNumber)\" $unannotatedOutputFile\n                            continue\n                        }\n                        if {![regexp \"DUP|ALL\" $g_AnnotSV(bracketedAltMode)] || $svlen > [expr {$g_AnnotSV(bracketedAltMaxSize)*1000000}]} {\n                            set svlen 0\n                            set svtype \"BND\"\n                            set end $posVCF\n                        }\n                    } elseif {($bracketRight eq \"]\" && $baseLeft ne \"\") || ($bracketRight eq \"\\[\" && $baseRight ne \"\")} {\n                        # INV (\"first mapped base\" is contained in the bracket: \"N]\" or \"[N\")\n                        #####################################################################\n                        # Example 1:\n                        # 3       2999    breakend_inv_1_a        T       T]3:5000]  \t=> Line analysed by AnnotSV\n                        # 3       5000    breakend_inv_1_b        T       [3:2999[T  \t=> Line NOT reported by AnnotSV (if the previous BND has already been analysed)\n                        # Example 2:\n                        # 3       3000    breakend_inv_2_a        T       [3:5001[T  \t=> Line analysed by AnnotSV\n                        # 3       5001    breakend_inv_2_b        T       T]3:3000] \t=> Line NOT reported by AnnotSV (if the previous BND has already been analysed)\n                        # Example 3:\n                        # 3       3000    breakend_inv_3_a        T       [3:5001[T     => Line analysed by AnnotSV\n                        # 3       5001    breakend_inv_3_b        T       [3:3000[T     => Line NOT reported by AnnotSV (if the previous BND has already been analysed)\n                        set svlen [expr {$inBracketStart-$posVCF}]\n                        set svtype \"INV\"\n                        set end $inBracketStart\n                        if {![regexp \"INV|ALL\" $g_AnnotSV(bracketedAltMode)] || $svlen > [expr {$g_AnnotSV(bracketedAltMaxSize)*1000000}]} {\n                            set svlen 0\n                            set svtype \"BND\"\n                            set end $posVCF\n                        }\n                        \n                    } elseif {$bracketRight eq \"\\[\" && $baseLeft ne \"\"} {\n                        # DEL (\"first mapped base\" is NOT contained in the bracket: \"N[\" or \"]N\"; \"first mapped base\" is before the brackets\n                        ####################################################################################################################\n                        # Example:\n                        # 12      3000    breakend_del_1_a        T       T[12:5000[ \t=> Line analysed by AnnotSV\n                        # 12      5000    breakend_del_1_b        T       ]12:3000]T  \t=> Line NOT reported by AnnotSV (if the previous BND has already been analysed)\n                        set svlen [expr {$posVCF-$inBracketStart}];# negative value for del\n                        set svtype \"DEL\"\n                        set end $inBracketStart\n                        if {[expr {abs($svlen)}]<$g_AnnotSV(SVminSize)} {\n                            # it is an indel\n                            WriteTextInFile \"${chrom}_${posVCF}_${end}_${svtype}_${ref}_${altVCF}: variantLength ([expr {abs($svlen)}]) < SVminSize ($g_AnnotSV(SVminSize)) (line $VCFlineNumber)\" $unannotatedOutputFile\n                            continue\n                        }\n                        if {![regexp \"DEL|ALL\" $g_AnnotSV(bracketedAltMode)] || $svlen > [expr {$g_AnnotSV(bracketedAltMaxSize)*1000000}]} {\n                            set svlen 0\n                            set svtype \"BND\"\n                            set end $posVCF\n                        }\n                    }\n                }\n                \n                \n            } elseif {[regexp -nocase \"^\\[acgtnACGTN.*\\]+$\" $ref$alt]} {\n                # Type1\n                regsub -all \"\\[*.\\]\" $ref \"\" refbis ;# cf GRIDSS comment, just below\n                regsub -all \"\\[*.\\]\" $alt \"\" altbis\n                \n                set variantLengthType1 [expr {[string length $altbis]-[string length $refbis]}]\n                if {[expr {abs($variantLengthType1)}] < $g_AnnotSV(SVminSize)} {\n                    # it is a small insertion or deletion (indel)\n                    WriteTextInFile \"${chrom}_${posVCF}_${end}_${svtype}_${ref}_${altVCF}: variantLength ([expr {abs($variantLengthType1)}]) < SVminSize ($g_AnnotSV(SVminSize)) (line $VCFlineNumber)\" $unannotatedOutputFile\n                    continue\n                }\n                \n                if {$variantLengthType1>0} {\n                    # insertion\n                    if {$end eq \"\"} {set end $posVCF}\n                    if {$svtype eq \"\"} {set svtype \"INS\"}\n                } else {\n                    # deletion\n                    if {$end eq \"\"} {set end [expr $pos-$variantLengthType1]}\n                    if {$svtype eq \"\"} {set svtype \"DEL\"}\n                }\n                \n                if {[regexp \"\\\\\\.\" $ref] || [regexp \"\\\\\\.\" $alt]} {\n                    # The GRIDSS author says that a . followed by bases refers to a single breakend where the reads cannot be uniquely mapped back.\n                    # e.g.: 2       39564894        gridss28_45b    T       .TTCTCTCATAACAAACCATGACATCCAGTCATTTAATACAATATGTCTGGGGTGGCTGGGCCCCTTTTTT 246.24  LOW_QUAL\n                    # => AnnotSV can not determine the SV length\n                    set variantLengthType1 \"\"\n                } elseif {[string length $refbis] < 10000 && [string length $altbis] < 10000} { ;# else we can have \"couldn't compile regular expression pattern: out of memory\" in the next regexp!!!\n                    if {![regexp -nocase \"$refbis\" $altbis] && ![regexp -nocase \"$altbis\" $refbis]} {\n                        # Complex SV: AGT>ATTGCATGGACCTGAGTCCCCAAAAAAAAAAATTTTTTTTTTGGGGGGGGGGCCCCCCCCCCGGGGGGGGGG\n                        # => AnnotSV can not determine the SV length\n                        set variantLengthType1 \"\"\n                    }\n                } else {\n                    # AnnotSV can not check the ref and alt values\n                    # => AnnotSV can not determine the SV length\n                    set variantLengthType1 \"\"\n                }\n                if {$svlen eq \"\"} {set svlen $variantLengthType1}\n            } else {\n                WriteTextInFile \"${chrom}_${posVCF}_${end}_${svtype}_${ref}_${altVCF}: not a known SV format (line $VCFlineNumber)\" $unannotatedOutputFile\n                continue\n            }\n            \n            \n            \n            if {$end < $pos} {set tutu $end; set end $pos; set pos $tutu}\n            if {$end eq $pos} {set end [expr {$pos+1}]}\n            \n            if {$g_AnnotSV(includeCI)} {\n                # Correction of the \"start\" / \"end\" SV positions by using the confidence interval around the boundaries:\n                ##INFO=<ID=CIPOS,Number=2,Type=Integer,Description=\"Confidence interval around POS for imprecise variants\">\n                ##INFO=<ID=CIEND,Number=2,Type=Integer,Description=\"Confidence interval around END for imprecise variants\">\n                # e.g. CIPOS=-10,10;CIEND=-10,10;  or  CIPOS=-6,5;CIEND=-6,5;  or  CIPOS=-410,410;CIEND=-410,410\n                set ciposleft [lindex [split $cipos \",\"] 0]\n                set ciendright [lindex [split $ciend \",\"] end]\n                if {$ciposleft < 0} {\n                    catch {incr pos $ciposleft}\n                    if {$pos <=0} {set pos 1}\n                }\n                if {$ciendright > 0} {\n                    catch {incr end $ciendright}\n                }\n            }\n            \n            # chrUn_KN707671v1_decoy\n            set L_orderedChrom {1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 X Y M MT}\n            if {[lsearch -exact \"$L_orderedChrom\" $chrom] eq -1} {\n                WriteTextInFile \"${chrom}_${posVCF}_${end}_${svtype}_${ref}_${altVCF}: chromosome \\\"$chrom\\\" unknown (line $VCFlineNumber)\" $unannotatedOutputFile\n                continue\n            }\n            # END of the SV not defined\n            if {$end eq \"\"} {\n                WriteTextInFile \"${chrom}_${posVCF}_${end}_${svtype}_${ref}_${altVCF}: END of the SV not defined (line $VCFlineNumber)\" $unannotatedOutputFile\n                continue\n            }\n            \n            if {$BNDrescue} {\n                set deb \"${chrom}_${posVCF}_${end}_${svtype}\"\n                set id [settingOfTheAnnotSVID $deb $ref $alt]\n                if {[lsearch -exact $L_squBrack_SV_ID_Written \"$id\"] ne -1} {\n                    WriteTextInFile \"$id: reciprocal breakend (line $VCFlineNumber)\" $unannotatedOutputFile\n                    continue\n                }\n            }\n            \n            if {$SquareBracketedSV} {\n                if {$svtype eq \"TRA\"} {\n                    # If both BND (of a TRA) are presents: the rescue of the 2d BND is already listed in $L_squBrack_SV_ID_Written\n                    set idTRArescue \"${chrom2}_${posVCF2}_${end2}_${svtype}_${ref}_<TRA>\"\n                    if {[lsearch -exact $L_squBrack_SV_ID_Written \"$idTRArescue\"] ne -1} {\n                        set TRArescue 0\n                    }\n                }\n            }\n            \n            # Set up for the Samples_ID value\n            # nUnknownGT = Number of Samples with unknown GT for an SV\n            set i_gt [lsearch -exact [split [lindex $Ls 8] \":\"] \"GT\"]\n            if {$i_gt eq -1} {\n                # If the GT is not given, AnnotSV considers that the SV is present in all the samples\n                set L_samplesid \"$L_allSamples\"\n            } else {\n                set GTabsent 0; # => the “GT” field is indicated in the FORMAT column\n                set L_samplesid {}\n                set isample 0\n                foreach sampleValue [lrange $Ls 9 end] {\n                    set gt [lindex [split $sampleValue \":\"] $i_gt]\n                    if {$gt ne \"0/0\" && $gt ne \"0\\|0\"} {\n                        if {$gt eq \"./.\" || $gt eq \".\\|.\"} {\n                            incr nUnknownGT\n                            if {$g_AnnotSV(missingGTinSamplesid)} {\n                                # AnnotSV reports the sample_id with unknown GT (\"./.\" and \".|.\")\n                                lappend L_samplesid [lindex $L_allSamples $isample]\n                            } else {\n                                # AnnotSV do not reports the sample_id with unknown GT (\"./.\" and \".|.\")\n                            }\n                        } else {\n                            lappend L_samplesid [lindex $L_allSamples $isample]\n                        }\n                    }\n                    incr isample\n                }\n            }\n            \n            # Text to write + Text to possibly rescue (TextToWrite_rescue)\n            #\n            # AnnotSV_ID is required to set the \"g_SVLEN($AnnotSV_ID)\" variable\n            # - For the setting of AnnotSV_ID, we use the \"ref\" and \"alt\" written in the BED file!\n            # - At the end, we unset the global variables \"g_ID\" and \"g_deb\"\n            \n            if {$g_AnnotSV(SVinputInfo)} {\n                set deb \"${chrom}_${posVCF}_${end}_${svtype}\"\n                set AnnotSV_ID [settingOfTheAnnotSVID $deb $ref $alt]\n                if {$BNDrescue} {\n                    # With the BND recovery, the REF and ALT fields have an undefined NT (\"N\")\n                    # #CHROM  POS     ID      REF     ALT     QUAL    FILTER  INFO    FORMAT  sample1  sample2\n                    set TextToWrite_rescue($AnnotSV_ID) \"$chrom\\t$pos\\t$end\\t$svtype\\t[join $L_samplesid \",\"]\\t[lindex $Ls 2]\\t$refVCF\\t$altVCF\\t[join [lrange $Ls 5 end] \"\\t\"]\"\n                    set VCFline_rescue($AnnotSV_ID) $VCFlineNumber\n                } else {\n                    lappend L_TextToWrite \"$chrom\\t$pos\\t$end\\t$svtype\\t[join $L_samplesid \",\"]\\t[join [lrange $Ls 2 end] \"\\t\"]\"\n                    if {$SquareBracketedSV} {\n                        #                        if {$svtype eq \"TRA\"} {\n                            #                            set idTRA \"${chrom}_${posVCF}_${end}_${svtype}_${ref}_<TRA>\"\n                            #                            lappend L_squBrack_SV_ID_Written \"$idTRA\"\n                            #                        } else {\n                            lappend L_squBrack_SV_ID_Written \"$AnnotSV_ID\"\n                            #                        }\n                    }\n                    #                    set AnnotSV_ID [settingOfTheAnnotSVID \"${chrom}_${pos}_${end}_${svtype}\" \"$refVCF\" \"$altVCF\"]\n                }\n                if {$TRArescue} {\n                    set deb2 \"${chrom2}_${posVCF2}_${end2}_${svtype}\"\n                    set AnnotSV_ID2 [settingOfTheAnnotSVID $deb2 \"N\" $altVCF2]\n                    set TextToWrite_rescue($AnnotSV_ID2) \"$chrom2\\t$pos2\\t$end2\\t$svtype\\t[join $L_samplesid \",\"]\\t[lindex $L2s 2]\\t$refVCF\\t$altVCF\\t[join [lrange $L2s 5 end] \"\\t\"]\"\n                    set VCFline_rescue($AnnotSV_ID2) $VCFlineNumber\n                }\n            } else {\n                # SVinputInfo = 0\n                set deb \"${chrom}_${posVCF}_${end}_${svtype}\"\n                set AnnotSV_ID [settingOfTheAnnotSVID $deb $ref $alt]\n                if {$BNDrescue} {\n                    set TextToWrite_rescue($AnnotSV_ID) \"$chrom\\t$pos\\t$end\\t$svtype\\t[join $L_samplesid \",\"]\\t$refVCF\\t$altVCF\\t[join [lrange $Ls 8 end] \"\\t\"]\"\n                    set VCFline_rescue($AnnotSV_ID) $VCFlineNumber\n                } else {\n                    lappend L_TextToWrite \"$chrom\\t$pos\\t$end\\t$svtype\\t[join $L_samplesid \",\"]\\t$refVCF\\t$altVCF\\t[join [lrange $Ls 8 end] \"\\t\"]\"\n                    if {$SquareBracketedSV} {\n                        if {$svtype eq \"TRA\"} {\n                            set idTRA \"${chrom}_${posVCF}_${end}_${svtype}_${ref}_<TRA>\"\n                            lappend L_squBrack_SV_ID_Written \"$idTRA\"\n                        } else {\n                            lappend L_squBrack_SV_ID_Written \"$AnnotSV_ID\"\n                        }\n                    }\n                }\n                if {$TRArescue} {\n                    set deb2 \"${chrom2}_${posVCF2}_${end2}_${svtype}\"\n                    set AnnotSV_ID2 [settingOfTheAnnotSVID $deb2 \"N\" $altVCF2]\n                    set TextToWrite_rescue($AnnotSV_ID2) \"$chrom2\\t$pos2\\t$end2\\t$svtype\\t[join $L_samplesid \",\"]\\t$refVCF\\t$altVCF\\t[join [lrange $L2s 8 end] \"\\t\"]\"\n                    set VCFline_rescue($AnnotSV_ID2) $VCFlineNumber\n                }\n            }\n            \n            # Definition of g_SVLEN:\n            # (If not defined here, the variant length can be calculated in AnnotSV-write.tcl for some type of SV)\n            if {$svlen ne \"\"} {\n                set g_SVLEN($AnnotSV_ID) $svlen\n                if {$TRArescue} {\n                    set g_SVLEN($AnnotSV_ID2) 0\n                }\n            }\n        }\n        if {![regexp -nocase \".gz$\" $VCFfile]} {close $f}\n        \n        \n        # Warning for the unknown GT\n        ############################\n        if {$g_AnnotSV(missingGTinSamplesid)} {\n            if {$nUnknownGT > 1} {\n                puts \"\\t...WARNING: $nUnknownGT missing alleles (./. or .\\|.) found in the GT field of reported SV\"\n                puts \"\\t            Corresponding samples have been reported in the \\\"Samples_ID\\\" output field\\n\"\n            } elseif {$nUnknownGT eq 1} {\n                puts \"\\t...WARNING: 1 missing allele (./. or .\\|.) found in the GT field of reported SV\"\n                puts \"\\t            Corresponding samples have been reported in the \\\"Samples_ID\\\" output field\\n\"\n            } else {puts \"\\n\"}\n        }\n        \n        # Writing of the BED file\n        #########################\n        WriteTextInFile [join $L_TextToWrite \"\\n\"] $SV_BEDfile\n        \n        # Writing of the BND rescue lines (if needed)\n        #############################################\n        set L_TextToWrite {}\n        foreach SV_ID [array names TextToWrite_rescue] {\n            if {[lsearch -exact $L_squBrack_SV_ID_Written \"$SV_ID\"] eq -1} {\n                lappend L_TextToWrite $TextToWrite_rescue($SV_ID)\n            } else {\n                WriteTextInFile \"$SV_ID: reciprocal breakend (line $VCFline_rescue($SV_ID))\" $unannotatedOutputFile\n            }\n        }\n        WriteTextInFile [join $L_TextToWrite \"\\n\"] $SV_BEDfile\n        \n        if {$g_AnnotSV(candidateSnvIndelFiles) ne \"\" && $GTabsent} {\n            puts \"...parsing of $SV_VCFfiles\"\n            puts \"\\t...WARNING: The SV genotype is not indicated in the FORMAT column under the “GT” field\"\n            puts \"\\t            => Compound heterozygosity analysis won't be processed!\\n\"\n            set g_AnnotSV(candidateSnvIndelFiles)   \"\"\n            set g_AnnotSV(candidateSnvIndelSamples) \"\"\n        }\n        \n        if {$VCFheader eq \"\"} { ; # No header in the VCF input file\n            #CHROM  POS     ID      REF     ALT     QUAL    FILTER  INFO    FORMAT  HG00096\n            if {$g_AnnotSV(SVinputInfo)} {\n                set length [llength [lrange $Ls 9 end]]\n                set VCFheader \"SV_type\\tID\\tREF\\tALT\\tQUAL\\tFILTER\\tINFO\\tFORMAT\\t[join [lrepeat $length \"\"] \"\\t\"]\"\n            } else {\n                set length [llength [lrange $Ls 8 end]]\n                set VCFheader \"SV_type\\tREF\\tALT\\t[join [lrepeat $length \"\"] \"\\t\"]\"\n            }\n        }\n        \n    }\n    \n    # Bedfile should be sorted and should not have \"chr\" in the first column\n    # -> This treatment will be done in the 'genesAnnotation' proc\n    \n    ## Bedfile: no SV to annotate if it is an empty file, or a file with only SNV/indel\n    if {[isAnEmptyFile $SV_BEDfile]} {\n        puts \"############################################################################\"\n        puts \"No SV to annotate in the SVinputFile - Exit without error.\"\n        puts \"############################################################################\"\n        exit 0\n    }\n    \n    # Unset the global variables \"g_ID\" and \"g_deb\" before to set the AnnotSV_ID variables in AnnotSV-write.tcl\n    unset g_ID\n    unset g_deb\n    \n    return \"$SV_BEDfile\"\n}\n\n"
  },
  {
    "path": "share/tcl/AnnotSV/AnnotSV-write.tcl",
    "content": "############################################################################################################\n# AnnotSV 3.5.8                                                                                            #\n#                                                                                                          #\n# AnnotSV: An integrated tool for Structural Variations annotation and ranking                             #\n#                                                                                                          #\n# Copyright (C) 2017-present Veronique Geoffroy (veronique.geoffroy@inserm.fr)                             #\n#                                                                                                          #\n# This is part of AnnotSV source code.                                                                     #\n#                                                                                                          #\n# This program is free software; you can redistribute it and/or                                            #\n# modify it under the terms of the GNU General Public License                                              #\n# as published by the Free Software Foundation; either version 3                                           #\n# of the License, or (at your option) any later version.                                                   #\n#                                                                                                          #\n# This program is distributed in the hope that it will be useful,                                          #\n# but WITHOUT ANY WARRANTY; without even the implied warranty of                                           #\n# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the                                             #\n# GNU General Public License for more details.                                                             #\n#                                                                                                          #\n# You should have received a copy of the GNU General Public License                                        #\n# along with this program; If not, see <http://www.gnu.org/licenses/>.                                     #\n############################################################################################################\n\n\n# Switch coordinates from BED to VCF format.\n# Input: chr1:12356-12359 (BED format)\n# Output: chr1:12357-12359 (VCF format)\nproc switchCoordinatesFromBEDtoVCF {BEDcoord} {\n    set liste [split $BEDcoord \":|-\"]\n    if {[llength $liste] ne 3} {\n        return $BEDcoord\n    } else {\n        set VCFcoord \"[lindex $liste 0]:[expr {[lindex $liste 1]+1}]-[lindex $liste 2]\"\n        return $VCFcoord\n    }\n}\n\nproc switchAllCoordinatesFromBEDtoVCFinLine {lineCompleted} {\n    # lineCompleted: AnnotSV_ID              chrom   SV_start   ...\n    # e.g.           15_1_20000000_DEL_1     15      1          ...\n    \n    # Formate \"AnnotSV_ID\" and \"SV_start\"\n    # (switch SV start coordinate from BED to VCF format)\n    #####################################################\n    regexp \"^\\[^\\t\\]+\\t\\[^\\t\\]+\\t(\\[0-9\\]+)\" $lineCompleted match SVstart_BED\n    set SVstart_VCF [expr {$SVstart_BED+1}]\n    \n    # Formate \"AnnotSV_ID\"\n    set AnnotSV_ID [lindex $lineCompleted 0]\n    set L_AnnotSV_ID [split $AnnotSV_ID \"_\"]\n    set updated_AnnotSV_ID [lindex $L_AnnotSV_ID 0]_${SVstart_VCF}_[lindex $L_AnnotSV_ID 2]_[lindex $L_AnnotSV_ID 3]_[lindex $L_AnnotSV_ID 4]\n    set length_AnnotSV_ID [expr {[string length $AnnotSV_ID]-1}]\n    set lineCompleted [string replace $lineCompleted 0 $length_AnnotSV_ID $updated_AnnotSV_ID]\n    \n    # Formate \"SV_start\"\n    set chrom [lindex $lineCompleted 1]\n    set length_chrom [string length $chrom]\n    set length_updated_AnnotSV_ID [string length $updated_AnnotSV_ID]\n    set lengthTot [expr {$length_updated_AnnotSV_ID+$length_chrom+1}]\n    if {[regexp -start $lengthTot -indices \"$SVstart_BED\" $lineCompleted match_indices]} {\n        set i_start [lindex $match_indices 0]\n        set i_end   [lindex $match_indices 1]\n        set lineCompleted [string replace $lineCompleted $i_start $i_end $SVstart_VCF]\n    }\n    \n    # Formate all genomic coordinates (e.g.: 2:1235-62531)\n    set i 0\n    while {[regexp -start $i -indices \"\\[0-9XYMT\\]+:\\[0-9\\]+-\\[0-9\\]+\" $lineCompleted match_indices]} {\n        set i_start [lindex $match_indices 0]\n        set i_end   [lindex $match_indices 1]\n        set BEDcoord [string range $lineCompleted $i_start $i_end]\n        set lineCompleted [string replace $lineCompleted $i_start $i_end [switchCoordinatesFromBEDtoVCF $BEDcoord]]\n        set i [expr {$i_end+1}]\n    }\n    \n    return $lineCompleted\n}\n\n\nproc OrganizeAnnotation {} {\n    \n    global g_AnnotSV\n    global g_Lgenes\n    global VCFheader\n    global g_numberOfAnnotationCol\n    global headerFileToRemove\n    global g_SVLEN\n    global g_ExtAnnotation\n    global g_rankingScore\n    global g_rankingExplanations\n    global g_re\n    global g_HITS\n    \n    # OUTPUT\n    ###############\n    set FullAndSplitBedFile \"$g_AnnotSV(outputDir)/$g_AnnotSV(outputFile).tmp\" ;# created in AnnotSV-genes.tcl\n    set outputFile \"$g_AnnotSV(outputDir)/$g_AnnotSV(outputFile)\"\n    \n    #########################################################################################\n    ################### Writing of the header (first line of the output) ####################\n    #########################################################################################\n    set headerOutput \"AnnotSV_ID\\tSV_chrom\\tSV_start\\tSV_end\\tSV_length\" ;# \"AnnotSV_ID\" and \"SV_start\" indices used in the switchAllCoordinatesFromBEDtoVCFinLine procedure\n    if {[info exist VCFheader]} {\n        # SVinputFile = VCF\n        append headerOutput \"\\t$VCFheader\"\n        set theBEDlength [expr {[llength [split $headerOutput \"\\t\"]]-2}] ; # we remove \"2\" for the 2 columns not in the input file (\"AnnotSV ID\" and \"SV length\")\n        if {$g_AnnotSV(SVinputInfo)} {\n            set g_AnnotSV(formatColNumber) 10 ;# used in AnnotSV-filteredVCF.tcl\n        } else {\n            set g_AnnotSV(formatColNumber) 6\n        }\n        if {[lsearch -exact $g_AnnotSV(outputColHeader) \"Samples_ID\"] ne \"-1\"} {\n            incr g_AnnotSV(formatColNumber) +1\n        }\n        set g_AnnotSV(SVinputInfo) 1 ; # The created bedfile contains only the info to report\n    } else {\n        # SVinputFile = BED\n        if {$g_AnnotSV(SVinputInfo)} {\n            # The user wants to keep all the columns from the SV BED input file\n            regsub -nocase \"(.formatted)?(.sorted)?.bed$\" $g_AnnotSV(bedFile) \".header.tsv\" headerSVinputFile\n            set theBEDlength [llength [split [FirstLineFromFile $g_AnnotSV(bedFile)] \"\\t\"]] ;# theBEDlength = number of col in the SV input BED file\n            \n            # $headerSVinputFile created if needed in the proc \"createBEDinputHeaderFile\"\n            set headerFromTheUser [split [FirstLineFromFile $headerSVinputFile] \"\\t\"]\n            if {[llength $headerFromTheUser] ne $theBEDlength} { ;# A stupid error can be to have a \"\\t\" at the end of the header line\n                puts \"Numbers of columns from $g_AnnotSV(SVinputFile) and $headerSVinputFile are different ($theBEDlength != [llength $headerFromTheUser])\"\n                puts \"=> Can not report: $headerFromTheUser\"\n            } else {\n                if {$g_AnnotSV(svtBEDcol) ne -1} {\n                    set headerFromTheUser [lreplace $headerFromTheUser $g_AnnotSV(svtBEDcol) $g_AnnotSV(svtBEDcol) \"SV_type\"]\n                }\n                if {$g_AnnotSV(samplesidBEDcol) ne -1} {\n                    set headerFromTheUser [lreplace $headerFromTheUser $g_AnnotSV(samplesidBEDcol) $g_AnnotSV(samplesidBEDcol) \"Samples_ID\"]\n                }\n                \n                set k 1\n                foreach colName [lrange $headerFromTheUser 3 end] {\n                    if {$colName ne \"\"} {\n                        append headerOutput \"\\t$colName\"\n                    } else {\n                        append headerOutput \"\\tuser#$k\"; incr k\n                    }\n                }\n            }\n        } else {\n            # At least the \"SV_type\" and the \"samples_ID\" columns should be reported for the ranking\n            if {$g_AnnotSV(svtTSVcol) ne -1} {\n                append headerOutput \"\\tSV_type\"\n            }\n            if {$g_AnnotSV(samplesidTSVcol) eq -1} {\n                regsub -nocase \"(.formatted)?(.sorted)?.bed$\" $g_AnnotSV(bedFile) \".header.tsv\" headerSVinputFile\n                set g_AnnotSV(samplesidTSVcol) [lsearch -exact [split [FirstLineFromFile $headerSVinputFile] \"\\t\"] \"Samples_ID\"]\n            }\n            append headerOutput \"\\tSamples_ID\"\n        }\n    }\n    append headerOutput \"\\tAnnotation_mode\"\n    if {$g_AnnotSV(cytoband)} {\n        if {[lsearch -exact \"$g_AnnotSV(outputColHeader)\" \"CytoBand\"] eq -1} {\n            set g_AnnotSV(cytoband) 0\n        } else {\n            append headerOutput \"\\tCytoBand\"\n        }\n    }\n    append headerOutput \"\\tGene_name\\tClosest_left\\tClosest_right\\tGene_count\\tTx\\tTx_version\\tTx_start\\tTx_end\\tOverlapped_tx_length\\tOverlapped_CDS_length\\tOverlapped_CDS_percent\\tFrameshift\\tExon_count\\tLocation\\tLocation2\\tDist_nearest_SS\\tNearest_SS_type\\tIntersect_start\\tIntersect_end\\tRE_gene\"\n    \n    ### Search for \"ref\" and \"alt\" information (to define the AnnotSV_ID)\n    set i_ref [lsearch -exact [split $headerOutput \"\\t\"] \"REF\"]\n    set i_alt [lsearch -exact [split $headerOutput \"\\t\"] \"ALT\"]\n    set i_ref [expr {$i_ref-2}] ;# (-2) because of the insertion of the END and SVTYPE values.\n    set i_alt [expr {$i_alt-2}] ;# (-2) because of the insertion of the END and SVTYPE values.\n    \n    ####### \"Pathogenic SV header\"\n    if {$g_AnnotSV(organism) eq \"Human\"} {\n        foreach svtype \"gain loss ins inv\" {\n            if {[lsearch -regexp \"$g_AnnotSV(outputColHeader)\" \"^P_${svtype}_\"] eq -1} { continue }\n            append headerOutput \"\\tP_${svtype}_phen\\tP_${svtype}_hpo\\tP_${svtype}_source\\tP_${svtype}_coord\"\n        }\n    }\n    \n    ####### \"Partially overlapped pathogenic SV header\"\n    if {$g_AnnotSV(organism) eq \"Human\"} {\n        foreach svtype \"gain loss\" {\n            if {[lsearch -regexp \"$g_AnnotSV(outputColHeader)\" \"^po_P_${svtype}_\"] eq -1} { continue }\n            append headerOutput \"\\tpo_P_${svtype}_phen\\tpo_P_${svtype}_hpo\\tpo_P_${svtype}_source\\tpo_P_${svtype}_coord\\tpo_P_${svtype}_percent\"\n        }\n    }\n    \n    ####### \"Pathogenic snv/indel header\"\n    if {$g_AnnotSV(organism) eq \"Human\"} {\n        if {[lsearch -regexp \"$g_AnnotSV(outputColHeader)\" \"^P_snvindel_\"] ne -1} {\n            append headerOutput \"\\tP_snvindel_nb\\tP_snvindel_phen\"\n        }\n    }\n    \n    ####### \"Benign SV header\"\n    if {$g_AnnotSV(organism) eq \"Human\"} {\n        foreach svtype \"gain loss ins inv\" {\n            if {[lsearch -regexp \"$g_AnnotSV(outputColHeader)\" \"^B_${svtype}_\"] eq -1} { continue }\n            append headerOutput \"\\tB_${svtype}_source\\tB_${svtype}_coord\\tB_${svtype}_AFmax\"\n        }\n    }\n    \n    ####### \"Partially overlapping benign SV header\"\n    if {$g_AnnotSV(organism) eq \"Human\"} {\n        foreach svtype \"gain loss\" {\n            if {[lsearch -regexp \"$g_AnnotSV(outputColHeader)\" \"^po_B_${svtype}_\"] eq -1} { continue }\n            append headerOutput \"\\tpo_B_${svtype}_allG_source\\tpo_B_${svtype}_allG_coord\"\n            append headerOutput \"\\tpo_B_${svtype}_someG_source\\tpo_B_${svtype}_someG_coord\"\n        }\n    }\n    \n    ####### usersDir: \"SVincludedInFt header\"\n    set usersDir \"$g_AnnotSV(annotationsDir)/Annotations_$g_AnnotSV(organism)/Users/$g_AnnotSV(genomeBuild)\"\n    if {[glob -nocomplain $usersDir/SVincludedInFt/*.formatted.sorted.bed] ne \"\"} {\n        foreach formattedUserBEDfile [glob -nocomplain $usersDir/SVincludedInFt/*.formatted.sorted.bed] {\n            regsub -nocase \".formatted.sorted.bed$\" $formattedUserBEDfile \".header.tsv\" userHeaderFile\n            set L1header [split [FirstLineFromFile $userHeaderFile] \"\\t\"]\n            set L_ann_ColName_from_header [lrange $L1header 3 end]\n            lappend SVincludedInFtHeader \"[join $L_ann_ColName_from_header \"\\t\"]\"\n        }\n        append headerOutput \"\\t[join $SVincludedInFtHeader \"\\t\"]\"\n    }\n    \n    ####### \"TAD header\"\n    if {$g_AnnotSV(tadAnn)} {\n        set g_AnnotSV(tadAnn_i) \"\"\n        set j 0\n        foreach col \"TAD_coordinate ENCODE_experiment\" {\n            if {[lsearch -exact \"$g_AnnotSV(outputColHeader)\" $col] ne -1} {\n                append headerOutput \"\\t$col\"\n                lappend g_AnnotSV(tadAnn_i) $j\n            }\n            incr j\n        }\n        if {$g_AnnotSV(tadAnn_i) eq \"\"} {set g_AnnotSV(tadAnn) 0}\n    }\n    \n    ####### \"VCF files header\"\n    if {$g_AnnotSV(snvIndelFiles) ne \"\"} {\n        foreach sample $g_AnnotSV(snvIndelSamples) {\n            append headerOutput \"\\tCount_hom($sample)\\tCount_htz($sample)\\tCount_htz/allHom($sample)\\tCount_htz/total(cohort)\"\n        }\n        append headerOutput \"\\tCount_total(cohort)\"\n    }\n    if {$g_AnnotSV(candidateSnvIndelFiles) ne \"\"} {\n        foreach sample $g_AnnotSV(candidateSnvIndelSamples) {\n            append headerOutput \"\\tcompound_htz($sample)\"\n        }\n    }\n    \n    #######  usersDir: \"FtIncludedInSV header\"\n    if {[glob -nocomplain $usersDir/FtIncludedInSV/*.formatted.sorted.bed] ne \"\"} {\n        foreach formattedUserBEDfile [glob -nocomplain $usersDir/FtIncludedInSV/*.formatted.sorted.bed] {\n            regsub -nocase \".formatted.sorted.bed$\" $formattedUserBEDfile \".header.tsv\" userHeaderFile\n            set L1header   [split [FirstLineFromFile $userHeaderFile] \"\\t\"]\n            set L_ann_ColName_from_header [lrange $L1header 3 end]\n            lappend FtIncludedInSVHeader \"[join $L_ann_ColName_from_header \"\\t\"]\"\n        }\n        append headerOutput \"\\t[join $FtIncludedInSVHeader \"\\t\"]\"\n    }\n    \n    #######  usersDir: \"AnyOverlap header\"\n    if {[glob -nocomplain $usersDir/AnyOverlap/*.formatted.sorted.bed] ne \"\"} {\n        foreach formattedUserBEDfile [glob -nocomplain $usersDir/AnyOverlap/*.formatted.sorted.bed] {\n            regsub -nocase \".formatted.sorted.bed$\" $formattedUserBEDfile \".header.tsv\" userHeaderFile\n            set L1header   [split [FirstLineFromFile $userHeaderFile] \"\\t\"]\n            set L_ann_ColName_from_header [lrange $L1header 3 end]\n            lappend AnyOverlapHeader \"[join $L_ann_ColName_from_header \"\\t\"]\"\n        }\n        append headerOutput \"\\t[join $AnyOverlapHeader \"\\t\"]\"\n    }\n    \n    #######  usersDir: \"BNDproximity header\"\n    if {[glob -nocomplain $usersDir/BNDproximity/*.formatted.sorted.bed] ne \"\"} {\n        foreach formattedUserBEDfile [glob -nocomplain $usersDir/BNDproximity/*.formatted.sorted.bed] {\n            regsub -nocase \".formatted.sorted.bed$\" $formattedUserBEDfile \".header.tsv\" userHeaderFile\n            set L1header   [split [FirstLineFromFile $userHeaderFile] \"\\t\"]\n            set L_ann_ColName_from_header [lrange $L1header 3 end]\n            lappend BNDproximityHeader \"[join $L_ann_ColName_from_header \"\\t\"]\"\n        }\n        append headerOutput \"\\t[join $BNDproximityHeader \"\\t\"]\"\n    }\n    \n    ####### \"Breakpoints header\"\n    if {$g_AnnotSV(gcContentAnn)} {\n        append headerOutput \"\\tGC_content_left\\tGC_content_right\"\n    }\n    if {$g_AnnotSV(repeatAnn)} {\n        append headerOutput \"\\tRepeat_coord_left\\tRepeat_type_left\\tRepeat_coord_right\\tRepeat_type_right\"\n    }\n    if {$g_AnnotSV(gapAnn)} {\n        append headerOutput \"\\tGap_left\\tGap_right\"\n    }\n    if {$g_AnnotSV(segdupAnn)} {\n        append headerOutput \"\\tSegDup_left\\tSegDup_right\"\n    }\n    if {$g_AnnotSV(ENCODEblacklistAnn)} {\n        append headerOutput \"\\tENCODE_blacklist_left\\tENCODE_blacklist_characteristics_left\\tENCODE_blacklist_right\\tENCODE_blacklist_characteristics_right\"\n    }\n    \n    ####### \"Gene-based header\"\n    if {$g_AnnotSV(geneBasedAnn)} {\n        set L_allGeneBasedHeader \"\"\n        if {[info exists g_AnnotSV(extann)] && $g_AnnotSV(extann) ne \"\"} { ; # g_AnnotSV(extann) defined in the main\n            ExternalAnnotations\n            foreach F [ExternalAnnotations L_Files] {\n                # we remove the first \"genes\" column (not reported in output, used as an ID)\n                regsub \"\\[^\\t\\]+\\t\" [ExternalAnnotations $F Header] \"\" extannHeader\n                lappend L_allGeneBasedHeader {*}[split $extannHeader \"\\t\"]\n            }\n        }\n        set g_AnnotSV(geneBasedAnn_i) \"\"\n        set j 0\n        foreach col \"$L_allGeneBasedHeader\" {\n            if {[lsearch -exact \"$g_AnnotSV(outputColHeader)\" $col] ne -1} {\n                append headerOutput \"\\t$col\"\n                lappend g_AnnotSV(geneBasedAnn_i) $j\n            }\n            incr j\n        }\n        if {$g_AnnotSV(geneBasedAnn_i) eq \"\"} {set g_AnnotSV(geneBasedAnn) 0}\n    }\n    \n    ####### \"PhenoGenius header\"\n    if {$g_AnnotSV(PhenoGeniusCli)} {\n        append headerOutput \"\\tPhenoGenius_score\\tPhenoGenius_phenotype\\tPhenoGenius_specificity\"\n    }\n    \n    ####### \"Exomiser header\"\n    if {$g_AnnotSV(hpo) ne \"\"} {\n        append headerOutput \"\\tExomiser_gene_pheno_score\\tHuman_pheno_evidence\\tMouse_pheno_evidence\\tFish_pheno_evidence\"\n    }\n    \n    # Preparation for the ranking (from benign to pathogenic)\n    SVprepareRanking $headerOutput    ; # svtTSVcol (for VCF input file) is defined there\n    \n    ####### \"Ranking header\"\n    if {$g_AnnotSV(organism) eq \"Human\"} {\n        if {$g_AnnotSV(svtTSVcol) eq -1} { ; # SV_type is required for the ranking of human SV\n            puts \"\\nWARNING: AnnotSV requires the SV type (duplication, deletion...) to classify the SV\"\n            puts \"         Not provided (svtBEDcol = -1)\"\n            puts \"         => No SV ranking (ACMG_class feature will be set to \\\"NA\\\")\\n\"\n            set g_AnnotSV(ranking) 0\n            \n            if {![regexp \"NA\" $g_AnnotSV(rankFiltering)]} {\n                puts \"\\nWARNING: -rankFiltering = $g_AnnotSV(rankFiltering)\"\n                puts \"         => SV with \\\"ACMG_class = NA\\\" will be filtered out\"\n                puts \"         => All the SV will be filtered out\\n\"\n            }\n        } else {\n            if {![regexp \"NA\" $g_AnnotSV(rankFiltering)]} {\n                puts \"\\nWARNING: -rankFiltering = $g_AnnotSV(rankFiltering)\"\n                puts \"         => SV with \\\"ACMG_class = NA\\\" will be filtered out\\n\"\n            }\n        }\n        append headerOutput \"\\tAnnotSV_ranking_score\"\n        append headerOutput \"\\tAnnotSV_ranking_criteria\"\n        append headerOutput \"\\tACMG_class\"\n    }\n    \n    ReplaceTextInFile $headerOutput $outputFile\n    \n    \n    \n    ##################################################################################\n    ################### Display of the annotations to be realized ####################\n    ##################################################################################\n    puts \"...listing of the annotations to be realized ([clock format [clock seconds] -format \"%B %d %Y - %H:%M\"])\"\n    if {$g_AnnotSV(cytoband)} {\n        puts \"\\t...CytoBand annotation\"\n    }\n    puts \"\\t...Genes annotation\"\n    puts \"\\t\\t...$g_AnnotSV(tx) annotation\"\n    \n    ####### \"Regulatory elements annotations\"\n    puts \"\\t...Regulatory elements annotations\"\n    if {$g_AnnotSV(promAnn)} {puts \"\\t\\t...Promoter annotations\"}\n    if {$g_AnnotSV(EAann)} {puts \"\\t\\t...EnhancerAtlas annotations\"}\n    if {$g_AnnotSV(GHann)} {puts \"\\t\\t...GeneHancer annotations\"}\n    if {$g_AnnotSV(miRNAann)} {puts \"\\t\\t...MiRTargetLink annotations\"}\n    if {$g_AnnotSV(ABCann)} {puts \"\\t\\t...ABC annotations\"}\n    if {$g_AnnotSV(MPRAann)} {puts \"\\t\\t...MPRA annotations\"}\n    \n    #######  Annotations with pathogenic genes or genomic regions (FtIncludedInSV)\n    if {$g_AnnotSV(organism) eq \"Human\"} {\n        puts \"\\t...Annotations with pathogenic genes or genomic regions\"\n        puts \"\\t\\t...dbVar annotation\"\n        puts \"\\t\\t...ClinVar annotation\"\n        puts \"\\t\\t...ClinGen annotation\"\n    }\n    \n    #######  Annotations with pathogenic snv/indel(FtIncludedInSV)\n    if {$g_AnnotSV(organism) eq \"Human\"} {\n        puts \"\\t...Annotations with pathogenic snv/indel\"\n    }\n    \n    #######  Annotations with benign genes or genomic regions (SVincludedInFt)\n    if {$g_AnnotSV(organism) eq \"Human\"} {\n        puts \"\\t...Annotations with benign genes or genomic regions\"\n        puts \"\\t\\t...gnomAD annotation\"\n        puts \"\\t\\t...ClinVar annotation\"\n        puts \"\\t\\t...ClinGen annotation\"\n        puts \"\\t\\t...DGV annotation\"\n        puts \"\\t\\t...DDD annotation\"\n        puts \"\\t\\t...1000g annotation\"\n        puts \"\\t\\t...Ira M. Hall's lab annotation\"\n        puts \"\\t\\t...Children’s Mercy Research Institute\"\n    }\n    \n    ####### Custom \"SVincludedInFt\"\n    set L_files_SVincludedInFt [glob -nocomplain $usersDir/SVincludedInFt/*.formatted.sorted.bed]\n    if {$L_files_SVincludedInFt ne \"\"} {\n        puts \"\\t...Annotations with features overlapping the SV ($g_AnnotSV(overlap) %)\"\n        foreach formattedUserBEDfile $L_filesSVincludedInFt {\n            puts \"\\t\\t...[file tail $formattedUserBEDfile]\"\n            regsub -nocase \".formatted.sorted.bed$\" $formattedUserBEDfile \".header.tsv\" userHeaderFile\n            set L1header [split [FirstLineFromFile $userHeaderFile] \"\\t\"]\n            set L_ann_ColName_from_header [lrange $L1header 3 end]\n            # Number of columns of annotation in the user bedfile (without the 3 columns \"chrom start end\")\n            set nColHeader [llength $L_ann_ColName_from_header]\n            puts \"\\t\\t($nColHeader annotations columns: [join $L_ann_ColName_from_header \", \"])\"\n        }\n    }\n    \n    ####### Custom \"FtIncludedInSV\"\n    set L_files_FtincludedInSV [glob -nocomplain $usersDir/FtIncludedInSV/*.formatted.sorted.bed]\n    if {$L_files_FtincludedInSV ne \"\" || $g_AnnotSV(tadAnn)} {\n        puts \"\\t...Annotations with features overlapped with the SV ($g_AnnotSV(overlap) %)\"\n    }\n    if {$g_AnnotSV(tadAnn)} {puts \"\\t\\t...TAD annotation\"}\n    foreach formattedUserBEDfile $L_files_FtincludedInSV {\n        puts \"\\t\\t...[file tail $formattedUserBEDfile]\"\n        regsub -nocase \".formatted.sorted.bed$\" $formattedUserBEDfile \".header.tsv\" userHeaderFile\n        set L1header   [split [FirstLineFromFile $userHeaderFile] \"\\t\"]\n        set L_ann_ColName_from_header [lrange $L1header 3 end]\n        # Number of columns of annotation in the user bedfile (without the 3 columns \"chrom start end\")\n        set nColHeader [llength $L_ann_ColName_from_header]\n        puts \"\\t\\t($nColHeader annotations columns: [join $L_ann_ColName_from_header \", \"])\"\n    }\n    \n    ####### Custom \"AnyOverlap\"\n    set L_files_AnyOverlap [glob -nocomplain $usersDir/AnyOverlap/*.formatted.sorted.bed]\n    if {$L_files_AnyOverlap ne \"\"} {\n        puts \"\\t...Annotations with features sharing any overlap with the SV\"\n    }\n    foreach formattedUserBEDfile $L_files_AnyOverlap {\n        puts \"\\t\\t...[file tail $formattedUserBEDfile]\"\n        regsub -nocase \".formatted.sorted.bed$\" $formattedUserBEDfile \".header.tsv\" userHeaderFile\n        set L1header   [split [FirstLineFromFile $userHeaderFile] \"\\t\"]\n        set L_ann_ColName_from_header [lrange $L1header 3 end]\n        # Number of columns of annotation in the user bedfile (without the 3 columns \"chrom start end\")\n        set nColHeader [llength $L_ann_ColName_from_header]\n        puts \"\\t\\t($nColHeader annotations columns: [join $L_ann_ColName_from_header \", \"])\"\n    }\n    \n    ####### Custom \"BNDproximity\"\n    set L_files_BNDproximity [glob -nocomplain $usersDir/BNDproximity/*.formatted.sorted.bed]\n    if {$L_files_BNDproximity ne \"\"} {\n        puts \"\\t...Annotations with features sharing very close BND with the SV\"\n    }\n    foreach formattedUserBEDfile $L_files_BNDproximity {\n        puts \"\\t\\t...[file tail $formattedUserBEDfile]\"\n        regsub -nocase \".formatted.sorted.bed$\" $formattedUserBEDfile \".header.tsv\" userHeaderFile\n        set L1header   [split [FirstLineFromFile $userHeaderFile] \"\\t\"]\n        set L_ann_ColName_from_header [lrange $L1header 3 end]\n        # Number of columns of annotation in the user bedfile (without the 3 columns \"chrom start end\")\n        set nColHeader [llength $L_ann_ColName_from_header]\n        puts \"\\t\\t($nColHeader annotations columns: [join $L_ann_ColName_from_header \", \"])\"\n    }\n    \n    ####### \"Breakpoints annotations\"\n    puts \"\\t...Breakpoints annotations\"\n    if {$g_AnnotSV(gcContentAnn)} {puts \"\\t\\t...GC content annotation\"}\n    if {$g_AnnotSV(repeatAnn)} {puts \"\\t\\t...Repeat annotation\"}\n    if {$g_AnnotSV(gapAnn)} {puts \"\\t\\t...Gap annotation\"}\n    if {$g_AnnotSV(segdupAnn)} {puts \"\\t\\t...Segmental duplication annotation\"}\n    if {$g_AnnotSV(ENCODEblacklistAnn)} {puts \"\\t\\t...ENCODE blacklist annotation\"}\n    \n    ####### \"Gene-based annotations\"\n    if {$g_AnnotSV(geneBasedAnn)} {\n        puts \"\\t...Gene-based annotations\"\n        puts \"[join $g_ExtAnnotation(display) \"\\n\"]\"\n    }\n    \n    ####### \"PhenoGenius annotations\"\n    if {$g_AnnotSV(PhenoGeniusCli)} {puts \"\\t...PhenoGenius annotations\"}\n    \n    ####### \"Exomiser annotation\"\n    if {$g_AnnotSV(hpo) ne \"\"} {puts \"\\t...Exomiser annotations\"}\n    \n    \n    \n    \n    ########################################################################\n    ################### Display: annotation in progress ####################\n    ########################################################################\n    puts \"\\n...annotation in progress ([clock format [clock seconds] -format \"%B %d %Y - %H:%M\"])\"\n    \n    \n    \n    #######################################################################################################\n    ##   Prepare the intersection between \"SV / genes\" and \"annotation BED files\" (benign SV...):\n    ##\n    ##   => creation of $g_AnnotSV(fullAndSplitBedFile),\n    ##      a bedfile with the coordinates (only 3 columns: chrom, start and end) of:\n    ##      - the SV to annotate (full)\n    ##      - the intersections with genes (split)\n    #######################################################################################################\n    set g_AnnotSV(fullAndSplitBedFile) \"$g_AnnotSV(outputDir)/[file tail $g_AnnotSV(bedFile)].users.bed\"\n    file delete -force $g_AnnotSV(fullAndSplitBedFile)\n    set L_UsersText {}\n    \n    set f [open \"$FullAndSplitBedFile\"]\n    while {! [eof $f]} {\n        set L [gets $f]\n        if {$L eq \"\"} {continue}\n        set Ls [split $L \"\\t\"]\n        set AnnotationMode [lindex $Ls end]\n        if {$AnnotationMode eq \"split\"} {\n            set SVchrom [lindex $Ls 0]\n            set SVleft  [lindex $Ls 1]\n            set SVright [lindex $Ls 2]\n            set exonStarts [lindex $Ls end-5]\n            set exonEnds   [lindex $Ls end-4]\n            set tx_left [lindex [split $exonStarts \",\"] 0]\n            set tx_right [lindex [split $exonEnds \",\"] end-1]\n            if {$SVleft<$tx_left} {set intersectStart \"$tx_left\"} else {set intersectStart \"$SVleft\"}\n            if {$SVright<$tx_right} {set intersectEnd \"$SVright\"} else {set intersectEnd \"$tx_right\"}\n            lappend L_UsersText \"$SVchrom\\t$intersectStart\\t$intersectEnd\"\n        } else {\n            lappend L_UsersText \"[join [lrange $Ls 0 2] \"\\t\"]\"\n        }\n    }\n    close $f\n    set L_UsersText [lsort -unique $L_UsersText]\n    WriteTextInFile [join $L_UsersText \"\\n\"] $g_AnnotSV(fullAndSplitBedFile)\n    checkBed $g_AnnotSV(fullAndSplitBedFile)\n    regsub -nocase \".bed$\" $g_AnnotSV(fullAndSplitBedFile) \".formatted.bed\" newFullAndSplitBedFile\n    \n    # Sorting of the bedfile:\n    # Intersection with very large files can cause trouble with excessive memory usage.\n    # A presort of the bed files by chromosome and then by start position combined with the use of the -sorted option will invoke a memory-efficient algorithm.\n    set g_AnnotSV(fullAndSplitBedFile) \"$g_AnnotSV(outputDir)/[file tail $g_AnnotSV(bedFile)].users.sorted.bed\"\n    set sortTmpFile \"$g_AnnotSV(outputDir)/[clock format [clock seconds] -format \"%Y%m%d-%H%M%S\"]_[pid]_sort.tmp.bash\"\n    ReplaceTextInFile \"#!/bin/bash\" $sortTmpFile\n    WriteTextInFile \"# The locale specified by the environment can affects the traditional sort order. We need to use native byte values.\" $sortTmpFile\n    WriteTextInFile \"export LC_ALL=C\" $sortTmpFile\n    WriteTextInFile \"sort -k1,1 -k2,2n $newFullAndSplitBedFile > $g_AnnotSV(fullAndSplitBedFile)\" $sortTmpFile\n    file attributes $sortTmpFile -permissions 0755\n    if {[catch {eval exec bash $sortTmpFile} Message]} {\n        puts \"-- OrganizeAnnotation --\"\n        puts \"sort -k1,1 -k2,2n $newFullAndSplitBedFile > $g_AnnotSV(fullAndSplitBedFile)\"\n        puts \"$Message\"\n        puts \"Exit with error\"\n        exit 2\n    }\n    file delete -force $sortTmpFile\n    file delete -force $newFullAndSplitBedFile\n    unset L_UsersText\n    \n    \n    \n    \n    ########################################################################\n    ################### Parse the \"FullAndSplitBedFile\" ####################\n    ########################################################################\n    \n    # FullAndSplitBedFile: Coordinates 0-based!!!\n    \n    set f [open \"$FullAndSplitBedFile\"]\n    \n    while {! [eof $f]} {\n        set L [gets $f]\n        if {$L eq \"\"} {continue}\n        set Ls [split $L \"\\t\"]\n        \n        # Full + split\n        set SVchrom   [lindex $Ls 0]\n        set SVleft    [lindex $Ls 1]\n        set SVright   [lindex $Ls 2]\n        \n        set AnnotationMode   [lindex $Ls end]                 ;# full or split\n        # SVtype is not normalized here\n        if {$g_AnnotSV(svtBEDcol) ne -1} {\n            set SVtype [lindex $Ls \"$g_AnnotSV(svtBEDcol)\"]                     ;# DEL, DUP, <CN0>...\n        } else {\n            set SVtype \"\"\n        }\n        \n        if {$g_AnnotSV(samplesidBEDcol) ne -1} {\n            set Samplesid [lindex $Ls \"$g_AnnotSV(samplesidBEDcol)\"]\n        } else {\n            set Samplesid \"\"\n        }\n        \n        if {$AnnotationMode eq \"split\"} {\n            # split\n            set txStart    [lindex $Ls end-12]\n            set txEnd      [lindex $Ls end-11]\n            set strand     [lindex $Ls end-10]\n            set geneName   [lindex $Ls end-9]\n            set NbGenes    \"\"\n            set transcript [lindex $Ls end-8]\n            set transcript_version [transcriptVersionAnnotation $transcript]\n            set CDSstart   [lindex $Ls end-7]\n            set CDSend     [lindex $Ls end-6]\n            set exonStarts [lindex $Ls end-5]\n            set exonEnds   [lindex $Ls end-4]\n            set CDSl       [lindex $Ls end-3]\n            set CDSpercent [lindex $Ls end-2]\n            set txL        [lindex $Ls end-1]\n            set locationStart \"\"\n            set locationEnd \"\"\n            set distNearestSSright \"\"\n            set distNearestSSrightA \"\"\n            set distNearestSSrightB \"\"\n            set distNearestSSleft \"\"\n            set distNearestSSleftA \"\"\n            set distNearestSSleftB \"\"\n            set distNearestSS \"\"\n            set nearestSStypeRight \"\"\n            set nearestSStypeLeft \"\"\n            set nearestSStype \"\"\n            set regionStart \"\"\n            set regionEnd \"\"\n            set intersectStart \"\"\n            set intersectEnd \"\"\n            set nbExons [expr {[llength [split $exonStarts \",\"]]-1}]\n            \n            # frameshift\n            set SVtype_norm [normalizeSVtype $SVtype]\n            if {[string is integer $CDSl]} {\n                if {$SVtype_norm eq \"DEL\" || $SVtype_norm eq \"DUP\"} {\n                    # Deletion\n                    if {$CDSl eq 0} {\n                        # Outside the CDS\n                        set frameshift \"NA\"\n                    } elseif {[expr {$CDSl%3}] eq 0} {\n                        # Number of nucleotides overlapped is a multiple of 3\n                        set frameshift \"no\"\n                    } else {\n                        # number of nucleotides overlapped is not a multiple of 3\n                        set frameshift \"yes\"\n                    }\n                } elseif {$SVtype_norm eq \"INS\"} {\n                    # Insertion\n                    if {![info exists g_SVLEN($AnnotSV_ID)] || ![string is integer $g_SVLEN($AnnotSV_ID)]} {\n                        # Insertion length is unknown\n                        set frameshift \"NA\"\n                    } elseif {[expr {$g_SVLEN($AnnotSV_ID)%3}] eq 0} {\n                        # Insertion length is a multiple of 3. The reading frame is preserved,\n                        # but the inserted sequence may still have functional consequences (e.g. introduction of a premature stop codon)\n                        set frameshift \"NA\"\n                    } else {\n                        # Insertion length is not a multiple of 3\n                        # We do not yet know if the INS is in the CDS at the moment. This will be checked later with the value \"location2\".\n                        set frameshift \"yes\"\n                    }\n                } else {\n                    # Translocations, Inversions, and other SV types\n                    set frameshift \"NA\"\n                }\n            } else {set frameshift \"NA\"}\n            \n        } else {\n            set SV \"[join [lrange $Ls 0 2] \"\\t\"]\"\n            # full\n            if {[info exists g_Lgenes($SV)]} {\n                set geneName \"$g_Lgenes($SV)\"  ; # SV/oldSV defined with: \"chrom, start, end, SVtype\":\t    set transcript         \"\"\n                set NbGenes \"[llength [split $g_Lgenes($SV) \";\"]]\"\n            } else {\n                set geneName \"\"\n                set NbGenes 0\n            }\n            set transcript \"\"\n            set transcript_version \"\"\n            set CDSl       \"\"\n            set CDSpercent \"\"\n            set txStart    \"\"\n            set txEnd      \"\"\n            set txL        \"\"\n            set location   \"\"\n            set location2  \"\"\n            set distNearestSS \"\"\n            set nearestSStype \"\"\n            set intersect  \"\\t\"\n            set nbExons    \"\"\n            set frameshift \"\"\n        }\n        \n        # Definition of \"locationStart\" and \"locationEnd\" variables\n        # Definition of \"distNearestSS\" and \"nearestSStype\" variables\n        # NearestSStype:\n        #   5' = splice donor site (on the right of the exon if strand +; else on the left)\n        #   3' = splice acceptor site (on the left of the exon if strand +; else on the right)\n        if {$AnnotationMode eq \"split\"} {\n            set nbEx [expr {[llength [split $exonStarts \",\"]]-1}] ; # Example: \"1652370,1657120,1660664,1661968,\" --> 1652370 1657120 1660664 1661968 {}\n            \n            set tx_left [lindex [split $exonStarts \",\"] 0]\n            set tx_right [lindex [split $exonEnds \",\"] end-1]\n            \n            if {$SVleft<=$tx_left} {         ; # SV begins before tx start (or tx end for strand \"-\")\n                if {$strand eq \"+\"} {\n                    set locationStart \"txStart\"\n                } else {\n                    set locationEnd \"txEnd\"\n                }\n            }\n            \n            set i 0\n            set previousB \"[lindex [split $exonEnds \",\"] 0]\"\n            foreach A [split $exonStarts \",\"] B [split $exonEnds \",\"] {\n                if {$A eq \"\" || $B eq \"\"} {continue}\n                incr i\n                # SV left\n                if {$SVleft<$B} {\n                    if {$SVleft>$A} {\n                        # in an exon\n                        set distNearestSSleftA \"[expr {$SVleft-$A}]\"\n                        set distNearestSSleftB \"[expr {$B-$SVleft}]\"\n                        if {$i eq 1} { ;# Only 1 splice site on the first exon\n                            set distNearestSSleft $distNearestSSleftB\n                            if {$strand eq \"+\"} {set nearestSStypeLeft \"5'\"} else {set nearestSStypeLeft \"3'\"}\n                        } elseif {$i eq $nbEx} { ;# Only 1 splice site on the last exon\n                            set distNearestSSleft $distNearestSSleftA\n                            if {$strand eq \"+\"} {set nearestSStypeLeft \"3'\"} else {set nearestSStypeLeft \"5'\"}\n                        } elseif {$distNearestSSleftA < $distNearestSSleftB} {\n                            set distNearestSSleft $distNearestSSleftA\n                            if {$strand eq \"+\"} {set nearestSStypeLeft \"3'\"} else {set nearestSStypeLeft \"5'\"}\n                        } else {\n                            set distNearestSSleft $distNearestSSleftB\n                            if {$strand eq \"+\"} {set nearestSStypeLeft \"5'\"} else {set nearestSStypeLeft \"3'\"}\n                        }\n                        if {$strand eq \"+\"} {\n                            set locationStart \"exon$i\"\n                        } else {\n                            set locationEnd \"exon[expr {$nbEx-$i+1}]\" ; # gene on the strand \"-\"\n                        }\n                    } elseif {$SVleft>=$previousB} {\n                        # in an intron\n                        set distNearestSSleftB \"[expr {$SVleft-$previousB}]\"\n                        set distNearestSSleftA \"[expr {$A-$SVleft}]\"\n                        if {$distNearestSSleftB < $distNearestSSleftA} {\n                            set distNearestSSleft $distNearestSSleftB\n                            if {$strand eq \"+\"} {set nearestSStypeLeft \"5'\"} else {set nearestSStypeLeft \"3'\"}\n                        } else {\n                            set distNearestSSleft $distNearestSSleftA\n                            if {$strand eq \"+\"} {set nearestSStypeLeft \"3'\"} else {set nearestSStypeLeft \"5'\"}\n                        }\n                        if {$strand eq \"+\"} {\n                            set locationStart \"intron[expr {$i-1}]\"\n                        } else {\n                            set locationEnd \"intron[expr {$nbEx-$i+1}]\"\n                        }\n                    }\n                }\n                # SV right\n                if {$SVright<$B} {\n                    if {$SVright>$A} {\n                        # in an exon\n                        set distNearestSSrightA \"[expr {$SVright-$A}]\"\n                        set distNearestSSrightB \"[expr {$B-$SVright}]\"\n                        if {$i eq 1} { ;# Only 1 splice site on the first exon\n                            set distNearestSSright $distNearestSSrightB\n                            if {$strand eq \"+\"} {set nearestSStypeRight \"5'\"} else {set nearestSStypeRight \"3'\"}\n                        } elseif {$i eq $nbEx} { ;# Only 1 splice site on the last exon\n                            set distNearestSSright $distNearestSSrightA\n                            if {$strand eq \"+\"} {set nearestSStypeRight \"3'\"} else {set nearestSStypeRight \"5'\"}\n                        } elseif {$distNearestSSrightA < $distNearestSSrightB} {\n                            set distNearestSSright $distNearestSSrightA\n                            if {$strand eq \"+\"} {set nearestSStypeRight \"3'\"} else {set nearestSStypeRight \"5'\"}\n                        } else {\n                            set distNearestSSright $distNearestSSrightB\n                            if {$strand eq \"+\"} {set nearestSStypeRight \"5'\"} else {set nearestSStypeRight \"3'\"}\n                        }\n                        if {$strand eq \"+\"} {\n                            set locationEnd \"exon$i\"\n                        } else {\n                            set locationStart \"exon[expr {$nbEx-$i+1}]\"\n                        }\n                        break\n                    } elseif {$SVright>=$previousB} {\n                        # in an intron\n                        set distNearestSSrightB \"[expr {$SVright-$previousB}]\"\n                        set distNearestSSrightA \"[expr {$A-$SVright}]\"\n                        if {$distNearestSSrightB < $distNearestSSrightA} {\n                            set distNearestSSright $distNearestSSrightB\n                            if {$strand eq \"+\"} {set nearestSStypeRight \"5'\"} else {set nearestSStypeRight \"3'\"}\n                        } else {\n                            set distNearestSSright $distNearestSSrightA\n                            if {$strand eq \"+\"} {set nearestSStypeRight \"3'\"} else {set nearestSStypeRight \"5'\"}\n                        }\n                        if {$strand eq \"+\"} {\n                            set locationEnd \"intron[expr {$i-1}]\"\n                        } else {\n                            set locationStart \"intron[expr {$nbEx-$i+1}]\"\n                        }\n                        break\n                    }\n                }\n                set previousB \"$B\"\n            }\n            if {$locationEnd eq \"\" || $locationStart eq \"\"} {     ; # SV finishes after tx end\n                if {$strand eq \"+\"} {\n                    set locationEnd \"txEnd\"\n                } else {\n                    set locationStart \"txStart\"\n                }\n            }\n            \n            set location \"${locationStart}-${locationEnd}\"\n            if {$location ne \"txStart-txEnd\"} {\n                if {$distNearestSSright eq \"\"} {\n                    if {$distNearestSSleft ne \"\"} {\n                        set distNearestSS \"$distNearestSSleft\"\n                        set nearestSStype \"$nearestSStypeLeft\"\n                    }\n                } elseif {$distNearestSSleft eq \"\"} {\n                    set distNearestSS \"$distNearestSSright\"\n                    set nearestSStype \"$nearestSStypeRight\"\n                } elseif {$distNearestSSright < $distNearestSSleft} {\n                    set distNearestSS \"$distNearestSSright\"\n                    set nearestSStype \"$nearestSStypeRight\"\n                } else {\n                    set distNearestSS \"$distNearestSSleft\"\n                    set nearestSStype \"$nearestSStypeLeft\"\n                }\n            }\n            \n            # Definition of \"regionStart\" and \"regionEnd\" variables\n            # Warning: some genes have CDSstart=CDSend=txEnd (<=> no CDS)\n            if {$CDSstart eq $CDSend} {\n                set regionLeft \"UTR\"\n                set regionRight \"UTR\"\n            } else {\n                # SVleft\n                if {$SVleft < $CDSstart} {\n                    if {$strand eq \"+\"} {\n                        set regionLeft \"5'UTR\"\n                    } else {\n                        set regionLeft \"3'UTR\"\n                    }\n                } elseif {$SVleft < $CDSend} {\n                    set regionLeft \"CDS\"\n                } else {\n                    if {$strand eq \"+\"} {\n                        set regionLeft \"3'UTR\"\n                    } else {\n                        set regionLeft \"5'UTR\"\n                    }\n                }\n                # SVright\n                if {$SVright < $CDSstart} {\n                    if {$strand eq \"+\"} {\n                        set regionRight \"5'UTR\"\n                    } else {\n                        set regionRight \"3'UTR\"\n                    }\n                } elseif {$SVright < $CDSend} {\n                    set regionRight \"CDS\"\n                } else {\n                    if {$strand eq \"+\"} {\n                        set regionRight \"3'UTR\"\n                    } else {\n                        set regionRight \"5'UTR\"\n                    }\n                }\n            }\n            if {$strand eq \"+\"} {\n                set regionStart $regionLeft\n                set regionEnd   $regionRight\n            } else {\n                set regionStart $regionRight\n                set regionEnd   $regionLeft\n            }\n            set location2 \"$regionStart-$regionEnd\"\n            if {[regexp \"(\\[^-\\]+)-(\\[^-\\]+)\" $location2 match titi tutu]} {\n                if {$titi eq $tutu} {set location2 $titi}\n            }\n            \n            # frameshift update for insertion\n            if {$SVtype_norm eq \"INS\"} {\n                if {![regexp \"exon\" $location2]} {\n                    # Insertion outside the CDS\n                    set frameshift \"NA\"\n                }\n            }\n        }\n        \n        # Definition of \"intersectStart\" and \"intersectEnd\" variables\n        if {$AnnotationMode eq \"split\"} {\n            if {$SVleft<$tx_left} {set intersectStart \"$tx_left\"} else {set intersectStart \"$SVleft\"}\n            if {$SVright<$tx_right} {set intersectEnd \"$SVright\"} else {set intersectEnd \"$tx_right\"}\n            set intersect \"$intersectStart\\t$intersectEnd\"\n        }\n        \n        # Closest genes annotation\n        if {$AnnotationMode eq \"full\"} {\n            # In Closest_left and Closest_right features, we only keep the closest gene:\n            #   - not overlapped with the SV (<=> not in $geneName)\n            #   - located up to 5 Mb to the left or right side of the SV\n            set L_geneName [split $geneName \";\"] ;# => gene names overlapped with the SV\n            set L_closestGenesLeft [closestGenesAnnotation $SVchrom $SVleft \"left\"]\n            set i [expr {[llength $L_closestGenesLeft]-1}]\n            set closestGeneText \"\"\n            while {$i >= 0} {\n                set gClosest [lindex $L_closestGenesLeft $i]\n                if {[lsearch -exact $L_geneName $gClosest] eq -1} {\n                    set closestGeneText \"$gClosest\"\n                    break\n                } else {\n                    incr i -1\n                }\n            }\n            set toAdd \"\"\n            foreach gClosest [closestGenesAnnotation $SVchrom $SVright \"right\"] {\n                if {[lsearch -exact $L_geneName $gClosest] eq -1} {\n                    set toAdd \"$gClosest\"\n                    break\n                }\n            }\n            append closestGeneText \"\\t$toAdd\"\n        } else {set closestGeneText \"\\t\"}\n        \n        # Regulatory elements annotation (only for the full lines)\n        # Human or mouse\n        set reText \"\"\n        if {$AnnotationMode eq \"full\"} {\n            if {[info exists g_re($SVchrom\\t$SVleft\\t$SVright)]} {\n                set reText $g_re($SVchrom\\t$SVleft\\t$SVright)\n            }\n        }\n        \n        # Annotations with pathogenic genes or genomic regions (FtIncludedInSV)\n        if {$g_AnnotSV(organism) eq \"Human\"} {\n            if {$AnnotationMode eq \"split\"} {\n                set pathogenicText \"[pathogenicSVannotation $SVchrom $intersectStart $intersectEnd]\"\n            } else {\n                set pathogenicText \"[pathogenicSVannotation $SVchrom $SVleft $SVright]\"\n            }\n        }\n        \n        # Annotations with \"partially overlapped\" (po) pathogenic genes or genomic regions\n        if {$g_AnnotSV(organism) eq \"Human\"} {\n            if {$AnnotationMode eq \"split\"} {\n                # nothing for the split lines\n                set poPathogenicText \"[poPathogenicSVannotation \"NULL\" \"NULL\" \"NULL\"]\"\n            } else {\n                set poPathogenicText \"[poPathogenicSVannotation $SVchrom $SVleft $SVright]\"\n            }\n        }\n        \n        # Annotations with pathogenic snv/indel (FtIncludedInSV)\n        if {$g_AnnotSV(organism) eq \"Human\"} {\n            if {$AnnotationMode eq \"split\"} {\n                set pathoSNVindelText \"[pathoSNVindelAnnotation $SVchrom $intersectStart $intersectEnd]\"\n            } else {\n                set pathoSNVindelText \"[pathoSNVindelAnnotation $SVchrom $SVleft $SVright]\"\n            }\n        }\n        \n        # Annotations with benign genes or genomic regions (SVincludedInFt)\n        if {$g_AnnotSV(organism) eq \"Human\"} {\n            if {$AnnotationMode eq \"split\"} {\n                set benignText \"[benignSVannotation $SVchrom $intersectStart $intersectEnd]\"\n            } else {\n                set benignText \"[benignSVannotation $SVchrom $SVleft $SVright]\"\n            }\n        }\n        \n        # Annotations with \"partially overlapping\" (po) benign genomic regions\n        if {$g_AnnotSV(organism) eq \"Human\"} {\n            if {$AnnotationMode eq \"split\"} {\n                # nothing for the split lines\n                set poBenignText \"[poBenignSVannotation \"NULL\" \"NULL\" \"NULL\" \"NULL\"]\"\n            } else {\n                set poBenignText \"[poBenignSVannotation $SVchrom $SVleft $SVright $geneName]\"\n            }\n        }\n        \n        # Annotations with cytoband (AnyOverlap)\n        if {$g_AnnotSV(cytoband)} {\n            set cytobandText \"\"\n            set cytobandDir \"$g_AnnotSV(annotationsDir)/Annotations_$g_AnnotSV(organism)/AnyOverlap/CytoBand/$g_AnnotSV(genomeBuild)/\"\n            set cytobandBEDfile [glob -nocomplain $cytobandDir/cytoBand_$g_AnnotSV(genomeBuild).formatted.sorted.bed]\n            if {[file exists $cytobandBEDfile]} {\n                set use3points \"0\"\n                if {$AnnotationMode eq \"split\"} {\n                    set L_cytobandText \"[userBEDannotation $cytobandBEDfile $SVchrom $intersectStart $intersectEnd $use3points]\"\n                } else {\n                    set L_cytobandText \"[userBEDannotation $cytobandBEDfile $SVchrom $SVleft $SVright $use3points]\"\n                }\n                set L_cytobandText [split $L_cytobandText \";\"]\n                set cytobandText [lindex $L_cytobandText 0]\n                if {[llength $L_cytobandText] > 1} {\n                    append cytobandText \"-[lindex $L_cytobandText end]\"\n                }\n            }\n        }\n        \n        # User SVincludedInFt BED annotations.\n        set L_SVincludedInFtText {}\n        foreach formattedUserBEDfile [glob -nocomplain $usersDir/SVincludedInFt/*.formatted.sorted.bed] {\n            if {$AnnotationMode eq \"split\"} {\n                lappend L_SVincludedInFtText \"[userBEDannotation $formattedUserBEDfile $SVchrom $intersectStart $intersectEnd]\"\n            } else {\n                lappend L_SVincludedInFtText \"[userBEDannotation $formattedUserBEDfile $SVchrom $SVleft $SVright]\"\n            }\n        }\n        set SVincludedInFTtext [join $L_SVincludedInFtText \"\\t\"]\n        \n        # User FtIncludedInSV BED annotations.\n        set L_FtIncludedInSVtext {}\n        foreach formattedUserBEDfile [glob -nocomplain $usersDir/FtIncludedInSV/*.formatted.sorted.bed] {\n            # Very slow with COSMIC data, to check\n            # puts \"$formattedUserBEDfile ([clock format [clock seconds] -format \"%H:%M\"])\"\n            if {$AnnotationMode eq \"split\"} {\n                lappend L_FtIncludedInSVtext \"[userBEDannotation $formattedUserBEDfile $SVchrom $intersectStart $intersectEnd]\"\n            } else {\n                lappend L_FtIncludedInSVtext \"[userBEDannotation $formattedUserBEDfile $SVchrom $SVleft $SVright]\"\n            }\n        }\n        set FtIncludedInSVtext [join $L_FtIncludedInSVtext \"\\t\"]\n        \n        # User AnyOverlap BED annotations.\n        set L_AnyOverlapText {}\n        foreach formattedUserBEDfile [glob -nocomplain $usersDir/AnyOverlap/*.formatted.sorted.bed] {\n            if {$AnnotationMode eq \"split\"} {\n                lappend L_AnyOverlapText \"[userBEDannotation $formattedUserBEDfile $SVchrom $intersectStart $intersectEnd]\"\n            } else {\n                lappend L_AnyOverlapText \"[userBEDannotation $formattedUserBEDfile $SVchrom $SVleft $SVright]\"\n            }\n        }\n        set AnyOverlapText [join $L_AnyOverlapText \"\\t\"]\n        \n        # User BNDproximity BED annotations.\n        set L_BNDproximityText {}\n        foreach formattedUserBEDfile [glob -nocomplain $usersDir/BNDproximity/*.formatted.sorted.bed] {\n            if {$AnnotationMode eq \"split\"} {\n                lappend L_BNDproximityText \"[userBEDannotation $formattedUserBEDfile $SVchrom $intersectStart $intersectEnd]\"\n            } else {\n                lappend L_BNDproximityText \"[userBEDannotation $formattedUserBEDfile $SVchrom $SVleft $SVright]\"\n            }\n        }\n        set BNDproximityText [join $L_BNDproximityText \"\\t\"]\n        \n        # Gene-based annotations.\n        if {$g_AnnotSV(geneBasedAnn)} {\n            #   -> Number of columns from each Gene-based file\n            if {[info exists g_AnnotSV(extann)] && $g_AnnotSV(extann) ne \"\"} {\n                foreach F [ExternalAnnotations L_Files] {\n                    set nbColumns($F) [expr {[llength [split [ExternalAnnotations $F Header] \"\\t\"]]-1}]\n                }\n            }\n            #   -> Annotations\n            set L_geneBasedText {}\n            if {$AnnotationMode eq \"split\"} {\n                ######### split lines ###################################\n                if {[info exists g_AnnotSV(extann)] && $g_AnnotSV(extann) != \"\"} {\n                    foreach F [ExternalAnnotations L_Files] {\n                        set AnnotFound \"[ExternalAnnotations $F $geneName]\"\n                        if {$AnnotFound eq \"\"} {\n                            lappend L_geneBasedText {*}\"[lrepeat $nbColumns($F) \"\"]\"\n                        } else {\n                            if {[set g_AnnotSV(metrics)] eq \"fr\"} {\n                                # Remove the exponential nomenclature: [expr {9.9443e-01}] = 0.99443\n                                # Change metrics from \".\" to \",\"\n                                foreach valueByColumn [split $AnnotFound \"\\t\"] {\n                                    # Only for the values like \"0.5\", \"-25.3\", \"9.3e-01\", \"9.3e+01\"\n                                    if {[regexp \"^(-)?\\[0-9\\]+\\\\.\\[0-9\\]+(e\\[-+\\]\\[0-9\\]+)?$\" $valueByColumn]} {\n                                        regsub -all {\\.} [expr {$valueByColumn}] \",\" valueByColumn\n                                    }\n                                    lappend L_geneBasedText \"$valueByColumn\"\n                                }\n                            } else {\n                                lappend L_geneBasedText {*}[split $AnnotFound \"\\t\"]\n                            }\n                        }\n                    }\n                }\n            } else {\n                ######### full lines ###################################\n                if {[info exists g_AnnotSV(extann)] && $g_AnnotSV(extann) != \"\"} {\n                    if {$geneName eq \"\"} {\n                        foreach F [ExternalAnnotations L_Files] {\n                            lappend L_geneBasedText {*}\"[lrepeat $nbColumns($F) \"\"]\"\n                        }\n                    } else {\n                        set allGenesFromFullLine [split $geneName \";\"]\n                        foreach F [ExternalAnnotations L_Files] {\n                            \n                            # First, we search for the annotation of each gene that we merge with a \";\"\n                            set L_AnnotFound {}\n                            foreach g $allGenesFromFullLine {\n                                set AnnotFound \"[ExternalAnnotations $F $g]\"\n                                if {$AnnotFound eq \"\"} {\n                                    set AnnotFound \"[join [lrepeat $nbColumns($F) \"\"] \"\\t\"]\"\n                                }\n                                lappend L_AnnotFound \"$AnnotFound\"\n                            }\n                            set tutu [MergeAnnotation $L_AnnotFound $nbColumns($F)]\n                            # Second (for full lines), we doesn't keep the annotation of all genes (value is set to empty),\n                            # except:\n                            # -  for \"decimal\" scores and percentages where we keep the max value\n                            #    (in order not to have value such \"1.5/////-0.2////\")\n                            # - for OMIM number where we keep all the numbers\n                            # - For LOEUF value where we keep the min value\n                            set L_newGeneBasedText \"\"\n                            if {$tutu eq \"\"} {lappend L_geneBasedText \"\"} ; #if {$tutu eq \"\"} => doesn't enter in the foreach\n                            foreach valueByColumn [split $tutu \"\\t\"] {\n                                if {$valueByColumn ne \"\"} {\n                                    set isAScore 1\n                                    set max -1000\n                                    foreach valueByGene [split $valueByColumn \";\"] {\n                                        if {[regexp \"ClinGenAnnotations.tsv\" $F]} {\n                                            set max \"\"\n                                            # For ClinGen file (HI + TS), the values are ordered as follow:\n                                            # 3 > 2 > 1 > 0 > 40 > 30 > Not yet evaluated\n                                            # We only report 3, 2 or 1 in a full line\n                                            if {[lsearch -exact {3 2 1} $valueByGene] ne -1} {\n                                                if {$valueByGene eq 3} {set max 3; break}\n                                                if {$valueByGene eq 2} {\n                                                    set max 2\n                                                } elseif {$max ne 2} {\n                                                    set max 1\n                                                }\n                                            }\n                                        } elseif {[regexp \"OMIM-1-annotations.tsv\" $F]} {\n                                            if {$valueByGene ne \"\"} {if {$max eq \"-1000\"} {set max \"$valueByGene\"} else {append max \";$valueByGene\"}}\n                                        } elseif {[regexp \"morbid\" $F]} {\n                                            if {[regexp \"yes\" $valueByGene]} {set max \"yes\"}\n                                        } elseif {[regexp \"gnomAD.LOEUF.pLI.annotations.tsv\" $F] && [regexp \"^\\[0-9\\]$\" $valueByGene]} {\n                                            # Only for the loeuf values: 0, 1, 2, 3, 4, 5, 6, 7, 8 or 9\n                                            # -\tLow LOEUF scores (e.g. 0) indicate strong selection against predicted loss-of-function (pLoF) variation in a given gene\n                                            # - High LOEUF scores (e.g. 9) suggest a relatively higher tolerance to inactivation\n                                            if {$valueByGene ne \"\" && ($max eq \"-1000\" || $valueByGene < $max)} {set max $valueByGene}\n                                        } else {\n                                            # Only for the values like \"0.5\", \"-25.3\", \"9.3e-01\", \"9.3e+01\"\n                                            if {[regexp \"^(-)?\\[0-9\\]+\\\\.\\[0-9\\]+(e\\[-+\\]\\[0-9\\]+)?$\" $valueByGene]} {\n                                                if {$valueByGene > $max} {set max $valueByGene}\n                                            } else {\n                                                set isAScore 0\n                                                #if {$valueByGene ne \"\"} {break}\n                                            }\n                                        }\n                                    }\n                                    if {$isAScore} {\n                                        # Remove the exponential nomenclature: [expr {9.9443e-01}] = 0.99443\n                                        # Change metrics from \".\" to \",\"\n                                        if {[set g_AnnotSV(metrics)] eq \"fr\"} {\n                                            regsub -all {\\.} [expr {$max}] \",\" max\n                                        }\n                                        lappend L_newGeneBasedText $max\n                                    } else {\n                                        lappend L_newGeneBasedText \"\"\n                                        \n                                    }\n                                } else {\n                                    lappend L_newGeneBasedText \"\"\n                                }\n                            }\n                            lappend L_geneBasedText {*}$L_newGeneBasedText\n                        }\n                    }\n                }\n            }\n            set geneBasedText \"\"\n            foreach i $g_AnnotSV(geneBasedAnn_i) {\n                lappend geneBasedText [lindex $L_geneBasedText $i]\n            }\n            set geneBasedText [join $geneBasedText \"\\t\"]\n        }\n        \n        # GC content annotation\n        if {$g_AnnotSV(gcContentAnn)} {\n            if {$AnnotationMode eq \"full\"} {\n                set gcContentText \"[GCcontentAnnotation $SVchrom $SVleft]\"\n                append gcContentText \"\\t[GCcontentAnnotation $SVchrom $SVright]\"\n            } else {set gcContentText \"\\t\"}\n        }\n        \n        # Repeat annotation\n        if {$g_AnnotSV(repeatAnn)} {\n            if {$AnnotationMode eq \"full\"} {\n                set repeatText \"[RepeatAnnotation $SVchrom $SVleft]\"\n                append repeatText \"\\t[RepeatAnnotation $SVchrom $SVright]\"\n            } else {set repeatText \"\\t\\t\\t\"}\n        }\n        \n        # Gap annotation\n        if {$g_AnnotSV(gapAnn)} {\n            if {$AnnotationMode eq \"full\"} {\n                set gapText \"[GapAnnotation $SVchrom $SVleft]\"\n                append gapText \"\\t[GapAnnotation $SVchrom $SVright]\"\n            } else {set gapText \"\\t\"}\n        }\n        \n        # Segmental duplication annotation\n        if {$g_AnnotSV(segdupAnn)} {\n            if {$AnnotationMode eq \"full\"} {\n                set segdupText \"[SegDupAnnotation $SVchrom $SVleft]\"\n                append segdupText \"\\t[SegDupAnnotation $SVchrom $SVright]\"\n            } else {set segdupText \"\\t\"}\n        }\n        \n        # ENCODE blacklist annotation\n        if {$g_AnnotSV(ENCODEblacklistAnn)} {\n            if {$AnnotationMode eq \"full\"} {\n                set ENCODEblacklistText \"[ENCODEblacklistAnnotation $SVchrom $SVleft]\"\n                append ENCODEblacklistText \"\\t[ENCODEblacklistAnnotation $SVchrom $SVright]\"\n            } else {set ENCODEblacklistText \"\\t\\t\\t\"}\n        }\n        \n        # TAD annotation\n        if {$g_AnnotSV(tadAnn)} {\n            if {$AnnotationMode eq \"split\"} {\n                set tadText \"[TADannotation $SVchrom $intersectStart $intersectEnd $g_AnnotSV(tadAnn_i)]\"\n            } else {\n                set tadText \"[TADannotation $SVchrom $SVleft $SVright $g_AnnotSV(tadAnn_i)]\"\n            }\n        }\n        \n        # Calculate among the SNV/indel (only for deletion) the:\n        # - #hom(sample), #htz(sample), #htz/allHom(sample), #htz/total(sample) variables for each sample\n        # - #total(cohort) variable\n        set HomHtz \"\"\n        if {$g_AnnotSV(snvIndelFiles) ne \"\"} {\n            if {$AnnotationMode eq \"split\"} {\n                set HomHtz \"[VCFannotation $SVchrom $intersectStart $intersectEnd $SVtype]\"\n            } else {\n                set HomHtz \"[VCFannotation $SVchrom $SVleft $SVright $SVtype]\"\n            }\n        }\n        \n        # Calculate the compound-htz variable\n        set compound \"\"\n        if {$g_AnnotSV(candidateSnvIndelFiles) ne \"\"} {\n            if {$AnnotationMode eq \"split\"} {\n                set compound [filteredVCFannotation $SVchrom $txStart $txEnd $Ls $headerOutput]\n            } else {\n                set compound [filteredVCFannotation \"FULL\" \"\" \"\" \"\" \"\"]\n            }\n        }\n        \n        # \"bestAnn\" annotation order:\n        # chrom txStart txEnd name2 name cdsStart cdsEnd exonStarts exonEnds\n        #\n        # headerOutput \"\\tAnnotation_mode\\tGene_name\\tGene_count\\tTx\\tTx_version\\tTx_start\\tTx_end\\tOverlapped_tx_length\\tOverlapped_CDS_length\\tOverlapped_CDS_percent\\tFrameshift\\tExon_count\\tLocation\\tLocation2\\tDist_nearest_SS\\tNearest_SS_type\\tIntersect_start\\tIntersect_end\\tRE_gene\"\n        \n        # Insertion of the SV length in the fourth column:\n        set SVchrom [lindex $Ls 0]\n        set SVstart_BED [lindex $Ls 1]\n        set SVstart_VCF [expr {$SVstart_BED+1}]\n        set SVend [lindex $Ls 2]\n        regsub \"chr\" [lindex $Ls $i_ref] \"\" ref\n        regsub \"chr\" [lindex $Ls $i_alt] \"\" alt\n        \n        # Creation of the AnnotSV ID (chrom_start_end_SVtype_i)\n        # (SV_type should not have any space or special car)\n        regsub -all \"\\[ .():;\\]\" $SVtype \"_\" SVtypeTmp\n        set AnnotSV_ID [settingOfTheAnnotSVID \"${SVchrom}_${SVstart_VCF}_${SVend}_$SVtypeTmp\" \"$ref\" \"$alt\"]\n        \n        # FullAndSplitBedFile: Coordinates 0-based!!!\n        # Report of the SV length\n        # set SVlength [expr {$SVend-$SVstart_BED}] ; # No! Wrong for an insertion, a BND or a translocation\n        if {[info exists g_SVLEN($AnnotSV_ID)]} {\n            set SVlength $g_SVLEN($AnnotSV_ID)\n        } else {\n            set SVtype_norm [normalizeSVtype $SVtype]\n            if {![info exist VCFheader]} {\n                # SVinputFile = BED\n                if {[regexp \"DEL\" $SVtype_norm]} { ;# DEL\n                    set SVlength [expr {$SVstart_BED-$SVend}]\n                } elseif {[regexp \"DUP|INV\" $SVtype_norm]} { ;# DUP or INV\n                    set SVlength [expr {$SVend-$SVstart_BED}]\n                } elseif {[regexp \"TRA\" $SVtype_norm]} { ;# TRA\n                    set SVlength 0\n                    set g_SVLEN($AnnotSV_ID) 0\n                } else {set SVlength \"\"}\n            } else {\n                # SVinputFile = VCF\n                if {[regexp \"DEL\" $SVtype_norm]} { ;# DEL\n                    set SVlength [expr {$SVstart_BED-$SVend}]\n                } elseif {[regexp \"DUP|INV\" $SVtype_norm]} { ;# DUP or INV\n                    set SVlength [expr {$SVend-$SVstart_BED}]\n                } elseif {[regexp \"TRA\" $SVtype_norm]} { ;# TRA\n                    set SVlength 0\n                    set g_SVLEN($AnnotSV_ID) 0\n                } else {set SVlength \"\"}\n            }\n        }\n        \n        ####### \"Phenogenius annotation\"\n        if {$g_AnnotSV(PhenoGeniusCli)} {\n            if {$AnnotationMode eq \"split\"} {\n                set phenogeniusText [PhenoGeniusCliAnnotation $geneName \"all\"]\n            } else {\n                set bestSpecificity \"\"\n                foreach g [split $geneName \";\"] {\n                    set specificity [PhenoGeniusCliAnnotation $g \"specificity\"]\n                    # {\"A\" < \"B\"} => True\n                    if {$specificity eq \"\"} {continue}\n                    if {$bestSpecificity eq \"\"} {set bestSpecificity $specificity; continue}\n                    if {$specificity < $bestSpecificity} {set bestSpecificity $specificity}\n                }\n                set phenogeniusText \"\\t\\t$bestSpecificity\"\n            }\n        }\n        ####### \"Exomiser annotation\"\n        if {$g_AnnotSV(hpo) ne \"\"} {\n            if {$AnnotationMode eq \"split\"} {\n                set exomiserText [ExomiserAnnotation $geneName \"all\"]\n            } else {\n                set bestScore \"-1.0\"\n                foreach g [split $geneName \";\"] {\n                    set score [ExomiserAnnotation $g \"score\"]\n                    if {$score > $bestScore} {set bestScore $score}\n                }\n                set exomiserText \"$bestScore\\t\\t\\t\"\n            }\n        }\n        \n        \n        #################################################################################\n        ############# creation of the \"L_TextToWrite(AnnotSV_ID)\" variable ##############\n        #################################################################################\n        \n        set TextToWrite \"\"\n        \n        ####### \"Basic SV annotations\"\n        if {$g_AnnotSV(SVinputInfo)} {\n            set toadd [lrange $Ls 0 [expr {$theBEDlength-1}]]\n            set toadd [linsert $toadd 3 $SVlength]\n            append TextToWrite \"$AnnotSV_ID\\t[join $toadd \"\\t\"]\"\n        } else {\n            append TextToWrite \"$AnnotSV_ID\\t[join [lrange $Ls 0 2] \"\\t\"]\\t$SVlength\"\n            if {$g_AnnotSV(svtBEDcol) ne -1} { ; # SV_type is required for the ranking\n                append TextToWrite \"\\t$SVtype\"\n                if {$g_AnnotSV(samplesidBEDcol) ne -1} {\n                    append TextToWrite \"\\t$Samplesid\"\n                }\n            } elseif {$g_AnnotSV(samplesidBEDcol) ne -1} {\n                append TextToWrite \"\\t$Samplesid\"\n            }\n        }\n        append TextToWrite \"\\t$AnnotationMode\"\n        \n        ####### \"Cytoband annotations\"\n        if {$g_AnnotSV(cytoband)} {\n            append TextToWrite \"\\t$cytobandText\"\n        }\n        \n        ####### \"Basic gene annotations\"\n        append TextToWrite \"\\t$geneName\\t$closestGeneText\\t$NbGenes\\t$transcript\\t$transcript_version\\t$txStart\\t$txEnd\\t$txL\\t$CDSl\\t$CDSpercent\\t$frameshift\\t$nbExons\\t$location\\t$location2\\t$distNearestSS\\t$nearestSStype\\t$intersect\"\n        \n        ####### \"Regulatory elements annotations\"\n        append TextToWrite \"\\t$reText\"\n        \n        #######  \"Annotations with pathogenic genes or genomic regions (FtIncludedInSV)\"\n        if {$g_AnnotSV(organism) eq \"Human\"} {\n            append TextToWrite \"\\t$pathogenicText\"\n        }\n        \n        #######  \"Annotations with \"partially overlapped\" pathogenic genes or genomic regions\"\n        if {$g_AnnotSV(organism) eq \"Human\"} {\n            append TextToWrite \"\\t$poPathogenicText\"\n        }\n        \n        #######  \"Annotations with pathogenic snv/indel (FtIncludedInSV)\"\n        if {$g_AnnotSV(organism) eq \"Human\"} {\n            append TextToWrite \"\\t$pathoSNVindelText\"\n        }\n        \n        #######  \"Annotations with benign genes or genomic regions (SVincludedInFt)\"\n        if {$g_AnnotSV(organism) eq \"Human\"} {\n            append TextToWrite \"\\t$benignText\"\n        }\n        \n        #######  \"Annotations with partially overlapping benign genomic regions\"\n        if {$g_AnnotSV(organism) eq \"Human\"} {\n            append TextToWrite \"\\t$poBenignText\"\n        }\n        \n        #######  \"Custom SVincludedInFt\"\n        if {[glob -nocomplain $usersDir/SVincludedInFt/*.formatted.sorted.bed] ne \"\"} { ; # Don't put {$SVincludedInFTtext ne \"\"}: the user BED could have only 1 annotation column, and so $UserText can be equel to \"\" (without \"\\t\")\n            append TextToWrite \"\\t$SVincludedInFTtext\"\n        }\n        \n        ####### Custom \"FtIncludedInSV\"\n        if {$g_AnnotSV(tadAnn)} {\n            append TextToWrite \"\\t$tadText\"\n        }\n        if {$HomHtz ne \"\"} {\n            append TextToWrite \"\\t$HomHtz\"\n        }\n        if {$g_AnnotSV(candidateSnvIndelFiles) ne \"\"} {\n            append TextToWrite \"\\t$compound\"\n        }\n        if {[glob -nocomplain $usersDir/FtIncludedInSV/*.formatted.sorted.bed] ne \"\"} { ; # Don't put {$FtIncludedInSVtext ne \"\"}: the user BED could have only 1 annotation column, and so $UserText can be equal to \"\" (without \"\\t\")\n            append TextToWrite \"\\t$FtIncludedInSVtext\"\n        }\n        \n        #######  \"Custom AnyOverlap\"\n        if {[glob -nocomplain $usersDir/AnyOverlap/*.formatted.sorted.bed] ne \"\"} { ; # Don't put {$AnyOverlaptext ne \"\"}: the user BED could have only 1 annotation column, and so $UserText can be equal to \"\" (without \"\\t\")\n            append TextToWrite \"\\t$AnyOverlapText\"\n        }\n        \n        #######  \"Custom BNDproximity\"\n        if {[glob -nocomplain $usersDir/BNDproximity/*.formatted.sorted.bed] ne \"\"} { ; # Don't put {$BNDproximitytext ne \"\"}: the user BED could have only 1 annotation column, and so $UserText can be equal to \"\" (without \"\\t\")\n            append TextToWrite \"\\t$BNDproximityText\"\n        }\n        \n        ####### \"Breakpoints annotations\"\n        if {$g_AnnotSV(gcContentAnn)} {\n            append TextToWrite \"\\t$gcContentText\"\n        }\n        if {$g_AnnotSV(repeatAnn)} {\n            append TextToWrite \"\\t$repeatText\"\n        }\n        if {$g_AnnotSV(gapAnn)} {\n            append TextToWrite \"\\t$gapText\"\n        }\n        if {$g_AnnotSV(segdupAnn)} {\n            append TextToWrite \"\\t$segdupText\"\n        }\n        if {$g_AnnotSV(ENCODEblacklistAnn)} {\n            append TextToWrite \"\\t$ENCODEblacklistText\"\n        }\n        ####### \"Gene-based annotations\"\n        if {$g_AnnotSV(geneBasedAnn)} {\n            append TextToWrite \"\\t$geneBasedText\"\n        }\n        ####### \"PhenoGenius annotation\"\n        if {$g_AnnotSV(PhenoGeniusCli)} {\n            append TextToWrite \"\\t$phenogeniusText\"\n        }\n        ####### \"Exomiser annotation\"\n        if {$g_AnnotSV(hpo) ne \"\"} {\n            append TextToWrite \"\\t$exomiserText\"\n        }\n        \n        ####### \"Memorize the AnnotSV_ID to then order the output lines\"\n        ## Done only the first time an AnnotSV_ID is met\n        ## (not for the split lines)\n        ## WARNING: AnnotSV_ID redundancy is not authorized between full lines\n        ##\t\t\tEach SV is assumed to only have one single line of 'full' annotation (no ID redundancy authorized in VCF)\n        if {![info exists L_TextToWrite($AnnotSV_ID)]} {\n            lappend L_AnnotSV_ID $AnnotSV_ID\n            if {$g_AnnotSV(hpo) ne \"\"} {\n                set bestExomiserScore($AnnotSV_ID) \"[lindex [split $exomiserText \"\\t\"] 0]\"\n            }\n        }\n        \n        ####### \"Ranking annotations\"\n        # Determine the SV ranking score in several steps:\n        # 1 - score computed with the full line\n        # 2 - score recomputed with the split lines\n        if {$g_AnnotSV(ranking)} {\n            set SVtype [normalizeSVtype $SVtype] ;# DEL or DUP or INS or INV or \"\"\n            if {$SVtype eq \"DEL\"} {\n                SVrankingLoss \"$TextToWrite\" ;# Creation of $g_rankingScore($AnnotSV_ID) and $g_rankingExplanations($AnnotSV_ID)\n            } elseif {$SVtype eq \"DUP\"} {\n                SVrankingGain \"$TextToWrite\" ;# Creation of $g_rankingScore($AnnotSV_ID) and $g_rankingExplanations($AnnotSV_ID)\n            } elseif {$SVtype eq \"INS\"} {\n                SVrankingINS \"$TextToWrite\" ;# Creation of $g_rankingScore($AnnotSV_ID) and $g_rankingExplanations($AnnotSV_ID)\n            } elseif {$SVtype eq \"INV\"} {\n                SVrankingINV \"$TextToWrite\" ;# Creation of $g_rankingScore($AnnotSV_ID) and $g_rankingExplanations($AnnotSV_ID)\n            } else {\n                set g_rankingScore($AnnotSV_ID) \"\"\n                set g_rankingExplanations($AnnotSV_ID) \"\"\n            }\n        }\n        \n        ####### Define $L_TextToWrite($AnnotSV_ID)\n        lappend L_TextToWrite($AnnotSV_ID) \"$TextToWrite\"\n    }\n    close $f\n    \n    \n    ## Finalize the ranking\n    #######################\n    if {$g_AnnotSV(ranking)} {\n        # Some input BED file can have the same SV described on several lines\n        foreach AnnotSV_ID [lsort -unique $L_AnnotSV_ID] {\n            set SVtype [lindex [split $AnnotSV_ID \"_\"] end-1]\n            set SVtype [normalizeSVtype $SVtype]\n            if {$SVtype eq \"DEL\"} {\n                achieveSVrankingLoss $AnnotSV_ID\n            } elseif {$SVtype eq \"DUP\"} {\n                achieveSVrankingGain $AnnotSV_ID\n            }\n        }\n    }\n    \n    \n    ################################################\n    ################### Writing ####################\n    ################################################\n    puts \"\\n...writing of $outputFile ([clock format [clock seconds] -format \"%B %d %Y - %H:%M\"])\"\n    set L_lineCompleted \"\"\n    \n    # If the ranking is provided, the SV in the output are classified:\n    # >>  from the higher to the lower ranking score\n    # >>  or (if equal), from the higher to the lower exomiser score\n    # >>  or (if equal), in the sorted order of the BED\n    if {$g_AnnotSV(ranking)} {\n        # Before:            L_AnnotSV_ID is a list of {AnnotSV_ID}\n        # After the foreach: L_AnnotSV_ID is a list of {AnnotSV_ID rankingScore exomiserScore}\n        foreach AnnotSV_ID $L_AnnotSV_ID {\n            if {![info exists bestExomiserScore($AnnotSV_ID)]} {set bestExomiserScore($AnnotSV_ID) \"-1\"}\n            if {$g_rankingScore($AnnotSV_ID) eq \"\"} {set score \"-99\"} else {set score $g_rankingScore($AnnotSV_ID)}\n            lappend L_AnnotSV_ID_completed \"$AnnotSV_ID $score $bestExomiserScore($AnnotSV_ID)\"\n        }\n        set L_AnnotSV_ID [lsort -command DescendingSortOnElement1 [lsort -command DescendingSortOnElement2 $L_AnnotSV_ID_completed]]\n    }\n    set i_Annotation_mode [lsearch -exact [split $headerOutput \"\\t\"] \"Annotation_mode\"]\n    set i_genename        [lsearch -exact [split $headerOutput \"\\t\"] \"Gene_name\"]\n    set i 0\n    \n    foreach AnnotSV_ID $L_AnnotSV_ID {\n        set AnnotSV_ID [lindex $AnnotSV_ID 0]\n        \n        foreach fullOrSplitLine $L_TextToWrite($AnnotSV_ID) {\n            set AnnMo [lindex [split $fullOrSplitLine \"\\t\"] $i_Annotation_mode]\n            set geneName [lindex [split $fullOrSplitLine \"\\t\"] $i_genename]\n            set lineCompleted \"\"\n            if {$AnnMo eq \"full\"} {\n                # Note: the ranking is available only for the full lines\n                append lineCompleted \"$fullOrSplitLine\"\n                \n                if {$g_AnnotSV(organism) eq \"Human\"} {\n                    if {![info exists g_rankingScore($AnnotSV_ID)]} {set g_rankingScore($AnnotSV_ID) \"\"}\n                    if {$g_rankingScore($AnnotSV_ID) ne \"\"} {\n                        set g_rankingScore($AnnotSV_ID) [expr {double(round(100*$g_rankingScore($AnnotSV_ID)))/100}] ;# e.g.: expr 1+0+0.9+0.3 = 2.1999999999999997 => becomes 2.2 with this line\n                    }\n                    # Change metrics from \".\" to \",\"\n                    if {[set g_AnnotSV(metrics)] eq \"fr\"} {\n                        regsub -all {\\.} $g_rankingScore($AnnotSV_ID) \",\" rankScoreFr\n                        append lineCompleted \"\\t$rankScoreFr\" ;#rankingScore\n                    } else {\n                        append lineCompleted \"\\t$g_rankingScore($AnnotSV_ID)\" ;#rankingScore\n                    }\n                    if {![info exists g_rankingExplanations($AnnotSV_ID)]} {\n                        set g_rankingExplanations($AnnotSV_ID) \"\"\n                    } elseif {[set g_AnnotSV(metrics)] eq \"fr\"} {\n                        regsub -all {([0-9])\\.([0-9])} $g_rankingExplanations($AnnotSV_ID) \"\\\\1,\\\\2\" g_rankingExplanations($AnnotSV_ID)\n                    }\n                    append lineCompleted \"\\t$g_rankingExplanations($AnnotSV_ID)\" ;#rankingExplanations\n                    if {$g_rankingScore($AnnotSV_ID) eq \"\"} {\n                        set class \"NA\"\n                    } elseif {$g_rankingScore($AnnotSV_ID) >= \"0.99\"} {\n                        set class 5\n                    } elseif {$g_rankingScore($AnnotSV_ID) >= \"0.9\"} {\n                        set class 4\n                    } elseif {$g_rankingScore($AnnotSV_ID) >= \"-0.89\"} {\n                        set class 3\n                    } elseif {$g_rankingScore($AnnotSV_ID) >= \"-0.98\"} {\n                        set class 2\n                    } else {\n                        set class 1\n                    }\n                    append lineCompleted \"\\t$class\"\t;#ACMGclass\n                    set g_ACMGclass($AnnotSV_ID,full) \"full=$class\"\n                    \n                    # To select the SV of a user-defined specific class (from 1 to 5)\n                    # default : $g_AnnotSV(rankFiltering) == {1 2 3 4 5 NA}\n                    if {[lsearch -exact $g_AnnotSV(rankFiltering) $class] eq -1} {\n                        continue\n                    }\n                }\n                \n                # For the use of the -annotationMode option: keep only the corresponding lines (full or split or both)\n                if {$g_AnnotSV(annotationMode) eq \"full\" && $AnnMo eq \"split\"} {continue}\n                if {$g_AnnotSV(annotationMode) eq \"split\" && $AnnMo eq \"full\"} {continue}\n                \n            } else {\n                if {$g_AnnotSV(organism) eq \"Human\"} {\n                    # To select the SV of a user-defined specific class (from 1 to 5)\n                    regsub \"full=\" $g_ACMGclass($AnnotSV_ID,full) \"\" class\n                    if {[lsearch -exact $g_AnnotSV(rankFiltering) $class] eq -1} {\n                        continue\n                    }\n                }\n                \n                # For the use of the -annotationMode option: keep only the corresponding lines (full or split or both)\n                if {$g_AnnotSV(annotationMode) eq \"full\" && $AnnMo eq \"split\"} {continue}\n                if {$g_AnnotSV(annotationMode) eq \"split\" && $AnnMo eq \"full\"} {continue}\n                \n                # Ranking not available for the split lines\n                append lineCompleted \"$fullOrSplitLine\"\n                if {$g_AnnotSV(organism) eq \"Human\"} {\n                    append lineCompleted \"\\t\"  ;#rankingScore\n                    append lineCompleted \"\\t\" ;#rankingExplanations\n                    append lineCompleted \"\\t$g_ACMGclass($AnnotSV_ID,full)\";#ACMGclass\n                }\n            }\n            \n            # To select only the SV annotations overlapping a gene from the \"candidateGenesFile\"\n            if {$g_AnnotSV(candidateGenesFiltering)} {\n                if {$geneName eq \"\"} {\n                    # No gene overlapped\n                    continue\n                }\n                set doNotDisplay 1\n                foreach g [split $geneName \";\"] {\n                    if {[isCandidate $g]} {\n                        set doNotDisplay 0\n                    }\n                }\n                if {$doNotDisplay} {continue}\n            }\n            \n            lappend L_lineCompleted [switchAllCoordinatesFromBEDtoVCFinLine \"$lineCompleted\"]\n            \n            # To avoid a segmentation fault\n            incr i\n            if {$i > 10000} {\n                WriteTextInFile [join $L_lineCompleted \"\\n\"] \"$outputFile\"\n                set L_lineCompleted {}\n                set i 0\n            }\n        }\n    }\n    \n    \n    WriteTextInFile [join $L_lineCompleted \"\\n\"] \"$outputFile\"\n    \n    \n    \n    ##############################################################\n    ################### Delete temporary file ####################\n    ##############################################################\n    file delete -force $FullAndSplitBedFile\n    file delete -force $g_AnnotSV(bedFile) ; # => \".formatted.bed\" tmp file\n    file delete -force $g_AnnotSV(fullAndSplitBedFile)\n    regsub -nocase \"(.formatted)?.bed$\" $g_AnnotSV(bedFile) \".breakpoints.bed\" tmpBreakpointsFile\n    file delete -force $tmpBreakpointsFile\n    foreach tmpBedFile [glob -nocomplain $g_AnnotSV(outputDir)/*_AnnotSV_inputSVfile.bed] {\n        file delete -force $tmpBedFile ; # => a bedfile is present only if \"-SVinputFile\" is a VCF\n    }\n    if {[info exists headerFileToRemove]} {\n        regsub -nocase \"(.formatted)?(.sorted)?.bed$\" $g_AnnotSV(bedFile) \".header.tsv\" BEDinputHeaderFile\n        file delete -force $BEDinputHeaderFile\n    }\n    if {[info exist g_AnnotSV(NAbedFile)]} {\n        file delete -force $g_AnnotSV(NAbedFile)\n    }\n    set benignDir \"$g_AnnotSV(annotationsDir)/Annotations_$g_AnnotSV(organism)/SVincludedInFt/BenignSV/$g_AnnotSV(genomeBuild)\"\n    foreach svtype {\"Gain\" \"Loss\"} {\n        set benignBEDfile [glob -nocomplain \"$benignDir/benign_${svtype}_SV_$g_AnnotSV(genomeBuild).sorted.bed\"]\n        regsub -nocase \"(.formatted)?.bed$\" $g_AnnotSV(bedFile) \".intersect.po_benign-$svtype\" tmpFile\n        set tmpFile \"$g_AnnotSV(outputDir)/[file tail $tmpFile]\"\n        file delete -force $tmpFile\n    }\n    \n    ################################################\n    ################### Display ####################\n    ################################################\n    puts \"\\n...output columns annotation ([clock format [clock seconds] -format \"%B %d %Y - %H:%M\"]):\"\n    regsub -all \"\\t\" $headerOutput \";\" t\n    puts \"\\t$t\\n\"\n    \n    \n    ################################################\n    ################# VCF output ###################\n    ################################################\n    if {$g_AnnotSV(vcf)} {\n        runVariantconvert $outputFile\n    }\n    \n    return\n}\n\n"
  },
  {
    "path": "share/tcl/AnnotSV/Scripts/lift_Over_a_BED_file.tcl",
    "content": "#!/usr/bin/env tclsh\n\n\n##########################################################################################################\n# When performing a liftover on a BED file with more than 3 columns (with annotation columns), it may fail\n# if some annotation values are empty.\n# This script allows:\n# - performing a liftover on the first three columns (chrom, start, end)\n# - keeping associated annotation columns (even if empty)\n# - adding the source of the chain file (e.g., \"b38-GCA_009914755.4.over.chain\" => source = \"b38\")\n#   in front of annotations that represent genomic positions (e.g. 3:12345-45678 => b38_3:12345-45678)\n##########################################################################################################\n\nproc ContentFromFile {{Fichier \"\"}} {\n    if {[string equal $Fichier \"\"]} {return \"\"}\n    set f     [open $Fichier r]\n    set Texte [read -nonewline $f]\n    close $f\n    return $Texte\n}\n\nproc LinesFromFile {{Fichier \"\"}} {\n    return [split [ContentFromFile $Fichier] \"\\n\"]\n}\n\nproc WriteTextInFile {texte fichier} {\n    set    fifi [open $fichier a]\n    puts  $fifi $texte\n    close $fifi\n    return 1\n}\n\n\n# Inputs\nset BEDfileToLift [lindex $argv 0]\nset outputFile [lindex $argv 1]\nfile delete -force $outputFile\nset chainFile [lindex $argv 2]\nset liftoverTool [lindex $argv 3]\nif {$liftoverTool eq \"\"} {set liftoverTool \"liftOver\"}\n\nif {[llength $argv] < 3} {\n    puts \"USAGE:\\n$argv0 BEDfileToLift outputFile chainFile {liftoverTool}\"\n    exit\n}\n\n\n# Parsing the chain file name\n# e.g:\tb38-GCA_009914755.4.over.chain => \"source = b38\"\nif {![regexp \"^(.*?)(-|To|_)\" [file tail $chainFile] match source]} {\n    puts \"...WARNING: No source extracted!\"\n} else {\n    regsub -all \"\\\"|'\" $source \"\" source\n    puts \"...genome source: $source\"\n}\n\n\n# Parsing of the BED file\nset id 0\nset L_toWrite {}\nset pid [pid]\nputs \"...reading [file tail $BEDfileToLift]\"\nputs \"...writing toLift.$pid.tmp.bed\"\nforeach L [LinesFromFile $BEDfileToLift] {\n    if {[regexp \"^#\" $L]} {continue}\n    if {$L == \"\"} {continue}\n    set Ls [split $L \"\\t\"]\n    incr id\n    \n    # Creation of a BED file whith only the chrom, start and end values\n    lappend L_toWrite \"[join [lrange $Ls 0 2] \"\\t\"]\\t$id\"\n    if {![expr {$id%80000}]} {\n        WriteTextInFile [join $L_toWrite \"\\n\"] toLift.$pid.tmp.bed\n        set L_toWrite {}\n    }\n    # Memorize the annotation columns\n    set L_annotationsColumns {}\n    foreach v [lrange $Ls 3 end] {\n        if {[regexp \"^\\[0-9XYchrMT\\]+:\\[0-9\\]+-\\[0-9\\]+\" $v ]} {\n            lappend L_annotationsColumns \"${source}_$v\"\n        } else {\n            lappend L_annotationsColumns \"$v\"\n        }\n    }\n    set t($id) $L_annotationsColumns\n}\nWriteTextInFile [join $L_toWrite \"\\n\"] toLift.$pid.tmp.bed\n\n\n# Liftover\nset command \"$liftoverTool toLift.$pid.tmp.bed $chainFile lifted.$pid.tmp.bed unmapped.$pid.bed\"\nputs \"...running:\"\nputs \"$command\"\nif {[catch {eval exec $command} Message]} {\n    puts \"$Message\"\n    if {[regexp -nocase \"error\" $Message]} {\n        file delete -force \"./toLift.$pid.tmp.bed\"\n        file delete -force \"./lifted.$pid.tmp.bed\"\n        file delete -force \"./unmapped.$pid.bed\"\n        exit\n    }\n}\n\n\n# Check and display different counts\nset n_lifted [lindex [eval exec wc -l \"./lifted.$pid.tmp.bed\"] 0]\nset n_unmapped [lindex [eval exec grep -c \"^#\" \"./unmapped.$pid.bed\"] 0]\n\nputs \"...$id genomic positions to lift\"\nputs \"...$n_lifted genomic positions lifted\"\nputs \"...$n_unmapped positions unmapped\"\n\nset a [expr {$id-$n_lifted}]\nif {$a != $n_unmapped} {\n    puts \"\\tplease check these counts\"\n}\n\n\n# Writting the lifted output file\nset L_toWrite {}\nforeach L [LinesFromFile ./lifted.$pid.tmp.bed] {\n    set Ls [split $L \"\\t\"]\n    set newLs [lrange $Ls 0 2]\n    set id [lindex $Ls 3]\n    lappend newLs {*}$t($id)\n    lappend L_toWrite [join $newLs \"\\t\"]\n    if {![expr {$id%80000}]} {\n        WriteTextInFile [join $L_toWrite \"\\n\"] $outputFile.tmp\n        set L_toWrite {}\n    }\n}\nWriteTextInFile [join $L_toWrite \"\\n\"] $outputFile.tmp\n\n\n# Sort the lifted output file\neval exec sort -k1,1 -k2,2n $outputFile.tmp > $outputFile\n\n\n# Clean\nputs \"...cleaning\"\nfile delete -force \"./toLift.$pid.tmp.bed\"\nfile delete -force \"./lifted.$pid.tmp.bed\"\nfile delete -force \"./unmapped.$pid.bed\"\nfile delete -force $outputFile.tmp\n\n"
  },
  {
    "path": "share/tcl/AnnotSV/tcllib/csv/csv.tcl",
    "content": "# csv.tcl --\n#\n#\tTcl implementations of CSV reader and writer\n#\n# Copyright (c) 2001      by Jeffrey Hobbs\n# Copyright (c) 2001-2013 by Andreas Kupries <andreas_kupries@users.sourceforge.net>\n#\n# See the file \"license.terms\" for information on usage and redistribution\n# of this file, and for a DISCLAIMER OF ALL WARRANTIES.\n# \n# RCS: @(#) $Id: csv.tcl,v 1.28 2011/11/23 02:22:10 andreas_kupries Exp $\n\npackage require Tcl 8.4\npackage provide csv 0.8.1\n\nnamespace eval ::csv {\n    namespace export join joinlist read2matrix read2queue report \n    namespace export split split2matrix split2queue writematrix writequeue\n}\n\n# ::csv::join --\n#\n#\tTakes a list of values and generates a string in CSV format.\n#\n# Arguments:\n#\tvalues\tA list of the values to join\n#\tsepChar\tThe separator character, defaults to comma\n#\tdelChar\tThe delimiter character, defaults to quote\n#\tdelMode\tIf set to 'always', values are always surrounded by delChar\n#\n# Results:\n#\tA string containing the values in CSV format.\n\nproc ::csv::join {values {sepChar ,} {delChar \\\"} {delMode auto}} {\n    set out \"\"\n    set sep {}\n    foreach val $values {\n\tif {($delMode eq \"always\") || [string match \"*\\[${delChar}$sepChar\\r\\n\\]*\" $val]} {\n\t    append out $sep${delChar}[string map [list $delChar ${delChar}${delChar}] $val]${delChar}\n\t} else {\n\t    append out $sep${val}\n\t}\n\tset sep $sepChar\n    }\n    return $out\n}\n\n# ::csv::joinlist --\n#\n#\tTakes a list of lists of values and generates a string in CSV\n#\tformat. Each item in the list is made into a single CSV\n#\tformatted record in the final string, the records being\n#\tseparated by newlines.\n#\n# Arguments:\n#\tvalues\tA list of the lists of the values to join\n#\tsepChar\tThe separator character, defaults to comma\n#\tdelChar\tThe delimiter character, defaults to quote\n#\tdelMode\tIf set to 'always', values are always surrounded by delChar\n#\n# Results:\n#\tA string containing the values in CSV format, the records\n#\tseparated by newlines.\n\nproc ::csv::joinlist {values {sepChar ,} {delChar \\\"} {delMode auto}} {\n    set out \"\"\n    foreach record $values {\n\t# note that this is ::csv::join\n\tappend out \"[join $record $sepChar $delChar $delMode]\\n\"\n    }\n    return $out\n}\n\n# ::csv::joinmatrix --\n#\n#\tTakes a matrix object following the API specified for the\n#\tstruct::matrix package. Each row of the matrix is converted\n#\tinto a single CSV formatted record in the final string, the\n#\trecords being separated by newlines.\n#\n# Arguments:\n#\tmatrix\tMatrix object command.\n#\tsepChar\tThe separator character, defaults to comma\n#\tdelChar\tThe delimiter character, defaults to quote\n#\tdelMode\tIf set to 'always', values are always surrounded by delChar\n#\n# Results:\n#\tA string containing the values in CSV format, the records\n#\tseparated by newlines.\n\nproc ::csv::joinmatrix {matrix {sepChar ,} {delChar \\\"} {delMode auto}} {\n    return [joinlist [$matrix get rect 0 0 end end] $sepChar $delChar $delMode]\n}\n\n# ::csv::iscomplete --\n#\n#\tA predicate checking if the argument is a complete csv record.\n#\n# Arguments\n#\tdata\tThe (partial) csv record to check.\n#\n# Results:\n#\tA boolean flag indicating the completeness of the data. The\n#\tresult is true if the data is complete.\n\nproc ::csv::iscomplete {data} {\n    expr {1 - [regexp -all \\\" $data] % 2}\n}\n\n# ::csv::read2matrix --\n#\n#\tA wrapper around \"Split2matrix\" reading CSV formatted\n#\tlines from the specified channel and adding it to the given\n#\tmatrix.\n#\n# Arguments:\n#\tm\t\tThe matrix to add the read data too.\n#\tchan\t\tThe channel to read from.\n#\tsepChar\t\tThe separator character, defaults to comma\n#\texpand\t\tThe expansion mode. The default is none\n#\n# Results:\n#\tA list of the values in 'line'.\n\nproc ::csv::read2matrix {args} {\n    # FR #481023\n    # See 'split2matrix' for the available expansion modes.\n\n    # Argument syntax:\n    #\n    #2)            chan m\n    #3)            chan m sepChar\n    #3) -alternate chan m\n    #4) -alternate chan m sepChar\n    #4)            chan m sepChar expand\n    #5) -alternate chan m sepChar expand\n\n    set alternate 0\n    set sepChar   ,\n    set expand    none\n\n    switch -exact -- [llength $args] {\n\t2 {\n\t    foreach {chan m} $args break\n\t}\n\t3 {\n\t    foreach {a b c} $args break\n\t    if {[string equal $a \"-alternate\"]} {\n\t\tset alternate 1\n\t\tset chan      $b\n\t\tset m         $c\n\t    } else {\n\t\tset chan    $a\n\t\tset m       $b\n\t\tset sepChar $c\n\t    }\n\t}\n\t4 {\n\t    foreach {a b c d} $args break\n\t    if {[string equal $a \"-alternate\"]} {\n\t\tset alternate 1\n\t\tset chan      $b\n\t\tset m         $c\n\t\tset sepChar   $d\n\t    } else {\n\t\tset chan    $a\n\t\tset m       $b\n\t\tset sepChar $c\n\t\tset expand  $d\n\t    }\n\t}\n\t5 {\n\t    foreach {a b c d e} $args break\n\t    if {![string equal $a \"-alternate\"]} {\n\t\treturn -code error \"wrong#args: Should be ?-alternate? chan m ?separator? ?expand?\"\n\t    }\n\t    set alternate 1\n\n\t    set chan    $b\n\t    set m       $c\n\t    set sepChar $d\n\t    set expand  $e\n\t}\n\t0 - 1 -\n\tdefault {\n\t    return -code error \"wrong#args: Should be ?-alternate? chan m ?separator? ?expand?\"\n\t}\n    }\n\n    if {[string length $sepChar] < 1} {\n\treturn -code error \"illegal separator character \\\"$sepChar\\\", is empty\"\n    } elseif {[string length $sepChar] > 1} {\n\treturn -code error \"illegal separator character \\\"$sepChar\\\", is a string\"\n    }\n\n    set data \"\"\n    while {![eof $chan]} {\n\tif {[gets $chan line] < 0} {continue}\n\n\t# Why skip empty lines? They may be in data. Except if the\n\t# buffer is empty, i.e. we are between records.\n\tif {$line == {} && $data == {}} {continue}\n\n       append data $line\n       if {![iscomplete $data]} {\n           # Odd number of quotes - must have embedded newline\n           append data \\n\n           continue\n       }\n\n       Split2matrix $alternate $m $data $sepChar $expand\n       set data \"\"\n    }\n    return\n}\n\n# ::csv::read2queue --\n#\n#\tA wrapper around \"::csv::split2queue\" reading CSV formatted\n#\tlines from the specified channel and adding it to the given\n#\tqueue.\n#\n# Arguments:\n#\tq\t\tThe queue to add the read data too.\n#\tchan\t\tThe channel to read from.\n#\tsepChar\t\tThe separator character, defaults to comma\n#\n# Results:\n#\tA list of the values in 'line'.\n\nproc ::csv::read2queue {args} {\n    # Argument syntax:\n    #\n    #2)            chan q\n    #3)            chan q sepChar\n    #3) -alternate chan q\n    #4) -alternate chan q sepChar\n\n    set alternate 0\n    set sepChar   ,\n\n    switch -exact -- [llength $args] {\n\t2 {\n\t    foreach {chan q} $args break\n\t}\n\t3 {\n\t    foreach {a b c} $args break\n\t    if {[string equal $a \"-alternate\"]} {\n\t\tset alternate 1\n\t\tset chan      $b\n\t\tset q         $c\n\t    } else {\n\t\tset chan    $a\n\t\tset q       $b\n\t\tset sepChar $c\n\t    }\n\t}\n\t4 {\n\t    foreach {a b c d} $args break\n\t    if {![string equal $a \"-alternate\"]} {\n\t\treturn -code error \"wrong#args: Should be ?-alternate? chan q ?separator?\"\n\t    }\n\t    set alternate 1\n\t    set chan    $b\n\t    set q       $c\n\t    set sepChar $d\n\t}\n\t0 - 1 -\n\tdefault {\n\t    return -code error \"wrong#args: Should be ?-alternate? chan q ?separator?\"\n\t}\n    }\n\n    if {[string length $sepChar] < 1} {\n\treturn -code error \"illegal separator character \\\"$sepChar\\\", is empty\"\n    } elseif {[string length $sepChar] > 1} {\n\treturn -code error \"illegal separator character \\\"$sepChar\\\", is a string\"\n    }\n\n    set data \"\"\n    while {![eof $chan]} {\n\tif {[gets $chan line] < 0} {continue}\n\n\t# Why skip empty lines? They may be in data. Except if the\n\t# buffer is empty, i.e. we are between records.\n\tif {$line == {} && $data == {}} {continue}\n\n\tappend data $line\n\tif {![iscomplete $data]} {\n\t    # Odd number of quotes - must have embedded newline\n\t    append data \\n\n\t    continue\n\t}\n\n\t$q put [Split $alternate $data $sepChar]\n\tset data \"\"\n    }\n    return\n}\n\n# ::csv::report --\n#\n#\tA report command which can be used by the matrix methods\n#\t\"format-via\" and \"format2chan-via\". For the latter this\n#\tcommand delegates the work to \"::csv::writematrix\". \"cmd\" is\n#\texpected to be either \"printmatrix\" or\n#\t\"printmatrix2channel\". The channel argument, \"chan\", has to\n#\tbe present for the latter and must not be present for the first.\n#\n# Arguments:\n#\tcmd\t\tEither 'printmatrix' or 'printmatrix2channel'\n#\tmatrix\t\tThe matrix to format.\n#\targs\t\t0 (chan): The channel to write to\n#\n# Results:\n#\tNone for 'printmatrix2channel', else the CSV formatted string.\n\nproc ::csv::report {cmd matrix args} {\n    switch -exact -- $cmd {\n\tprintmatrix {\n\t    if {[llength $args] > 0} {\n\t\treturn -code error \"wrong # args:\\\n\t\t\t::csv::report printmatrix matrix\"\n\t    }\n\t    return [joinlist [$matrix get rect 0 0 end end]]\n\t}\n\tprintmatrix2channel {\n\t    if {[llength $args] != 1} {\n\t\treturn -code error \"wrong # args:\\\n\t\t\t::csv::report printmatrix2channel matrix chan\"\n\t    }\n\t    writematrix $matrix [lindex $args 0]\n\t    return \"\"\n\t}\n\tdefault {\n\t    return -code error \"Unknown method $cmd\"\n\t}\n    }\n}\n\n# ::csv::split --\n#\n#\tSplit a string according to the rules for CSV processing.\n#\tThis assumes that the string contains a single line of CSVs\n#\n# Arguments:\n#\tline\t\tThe string to split\n#\tsepChar\t\tThe separator character, defaults to comma\n#\n# Results:\n#\tA list of the values in 'line'.\n\nproc ::csv::split {args} {\n    # Argument syntax:\n    #\n    # (1)            line\n    # (2)            line sepChar\n    # (2) -alternate line\n    # (3) -alternate line sepChar\n\n    # (3)            line sepChar delChar\n    # (4) -alternate line sepChar delChar\n\n    set alternate 0\n    set sepChar   ,\n    set delChar   \\\"\n\n    switch -exact -- [llength $args] {\n\t1 {\n\t    set line [lindex $args 0]\n\t}\n\t2 {\n\t    foreach {a b} $args break\n\t    if {[string equal $a \"-alternate\"]} {\n\t\tset alternate 1\n\t\tset line     $b\n\t    } else {\n\t\tset line    $a\n\t\tset sepChar $b\n\t    }\n\t}\n\t3 {\n\t    foreach {a b c} $args break\n\t    if {[string equal $a \"-alternate\"]} {\n\t        set alternate 1\n\t\tset line    $b\n\t\tset sepChar $c\n\t    } else {\n\t\tset line    $a\n\t\tset sepChar $b\n\t\tset delChar $c\n            }\n\t}\n\t4 {\n\t    foreach {a b c d} $args break\n\t    if {![string equal $a \"-alternate\"]} {\n\t\treturn -code error \"wrong#args: Should be ?-alternate? line ?separator? ?delimiter?\"\n\t    }\n\t    set alternate 1\n\t    set line    $b\n\t    set sepChar $c\n\t    set delChar $d\n\t}\n\t0 -\n\tdefault {\n\t    return -code error \"wrong#args: Should be ?-alternate? line ?separator? ?delimiter?\"\n\t}\n    }\n\n    if {[string length $sepChar] < 1} {\n\treturn -code error \"illegal separator character ${delChar}$sepChar${delChar}, is empty\"\n    } elseif {[string length $sepChar] > 1} {\n\treturn -code error \"illegal separator character ${delChar}$sepChar${delChar}, is a string\"\n    }\n\n    if {[string length $delChar] < 1} {\n\treturn -code error \"illegal separator character \\\"$delChar\\\", is empty\"\n    } elseif {[string length $delChar] > 1} {\n\treturn -code error \"illegal separator character \\\"$delChar\\\", is a string\"\n    }\n\n    return [Split $alternate $line $sepChar $delChar]\n}\n\nproc ::csv::Split {alternate line sepChar {delChar \\\"}} {\n    # Protect the sepchar from special interpretation by\n    # the regex calls below.\n\n    set sepRE \\[\\[.${sepChar}.]]\n    set delRE \\[\\[.${delChar}.]]\n\n    if {$alternate} {\n\t# The alternate syntax requires a different parser.\n\t# A variation of the string map / regsub parser for the\n\t# regular syntax was tried but does not handle embedded\n\t# doubled \" well (testcase csv-91.3 was 'knownBug', sole\n\t# one, still a bug). Now we just tokenize the input into\n\t# the primary parts (sep char, \"'s and the rest) and then\n\t# use an explicitly coded state machine (DFA) to parse\n\t# and convert token sequences.\n\n\t## puts 1->>$line<<\n\tset line [string map [list \\\n\t\t$sepChar \\0$sepChar\\0 \\\n\t\t$delChar \\0${delChar}\\0 \\\n\t\t] $line]\n\n\t## puts 2->>$line<<\n\tset line [string map [list \\0\\0 \\0] $line]\n\tregsub \"^\\0\" $line {} line\n\tregsub \"\\0$\" $line {} line\n\n\t## puts 3->>$line<<\n\n\tset val \"\"\n\tset res \"\"\n\tset state base\n\n\t## puts 4->>[::split $line \\0]\n\tforeach token [::split $line \\0] {\n\n\t    ## puts \"\\t*= $state\\t>>$token<<\"\n\t    switch -exact -- $state {\n\t\tbase {\n\t\t    if {[string equal $token \"${delChar}\"]} {\n\t\t\tset state qvalue\n\t\t\tcontinue\n\t\t    }\n\t\t    if {[string equal $token $sepChar]} {\n\t\t\tlappend res $val\n\t\t\tset val \"\"\n\t\t\tcontinue\n\t\t    }\n\t\t    append val $token\n\t\t}\n\t\tqvalue {\n\t\t    if {[string equal $token \"${delChar}\"]} {\n\t\t\t# May end value, may be a doubled \"\n\t\t\tset state endordouble\n\t\t\tcontinue\n\t\t    }\n\t\t    append val $token\n\t\t}\n\t\tendordouble {\n\t\t    if {[string equal $token \"${delChar}\"]} {\n\t\t\t# Doubled \", append to current value\n\t\t\tappend val ${delChar} \n\t\t\tset state qvalue\n\t\t\tcontinue\n\t\t    }\n\t\t    # Last \" was end of quoted value. Close it.\n\t\t    # We expect current as $sepChar\n\n\t\t    lappend res $val\n\t\t    set          val \"\"\n\t\t    set state base\n\n\t\t    if {[string equal $token $sepChar]} {continue}\n\n\t\t    # Undoubled \" in middle of text. Just assume that\n\t\t    # remainder is another qvalue.\n\t\t    set state qvalue\n\t\t}\n\t\tdefault {\n\t\t    return -code error \"Internal error, illegal parsing state\"\n\t\t}\n\t    }\n\t}\n\n\t## puts \"/= $state\\t>>$val<<\"\n\n\tlappend res $val\n\n\t## puts 5->>$res<<\n\treturn $res\n    } else {\n\tregsub -- \"$sepRE${delRE}${delRE}$\" $line $sepChar\\0${delChar}${delChar}\\0 line\n\tregsub -- \"^${delRE}${delRE}$sepRE\" $line \\0${delChar}${delChar}\\0$sepChar line\n\tregsub -all -- {(^${delChar}|${delChar}$)} $line \\0 line\n\n\tset line [string map [list \\\n\t\t$sepChar${delChar}${delChar}${delChar} $sepChar\\0${delChar} \\\n\t\t${delChar}${delChar}${delChar}$sepChar ${delChar}\\0$sepChar \\\n\t\t${delChar}${delChar}           ${delChar} \\\n\t\t${delChar}             \\0 \\\n\t\t] $line]\n\n\tset end 0\n\twhile {[regexp -indices -start $end -- {(\\0)[^\\0]*(\\0)} $line \\\n\t\t-> start end]} {\n\t    set start [lindex $start 0]\n\t    set end   [lindex $end 0]\n\t    set range [string range $line $start $end]\n\t    if {[string first $sepChar $range] >= 0} {\n\t\tset line [string replace $line $start $end \\\n\t\t\t[string map [list $sepChar \\1] $range]]\n\t    }\n\t    incr end\n\t}\n\tset line [string map [list $sepChar \\0 \\1 $sepChar \\0 {} ] $line]\n\treturn [::split $line \\0]\n\n    }\n}\n\n# ::csv::split2matrix --\n#\n#\tSplit a string according to the rules for CSV processing.\n#\tThis assumes that the string contains a single line of CSVs.\n#\tThe resulting list of values is appended to the specified\n#\tmatrix, as a new row. The code assumes that the matrix provides\n#\tthe same interface as the queue provided by the 'struct'\n#\tmodule of tcllib, \"add row\" in particular.\n#\n# Arguments:\n#\tm\t\tThe matrix to write the resulting list to.\n#\tline\t\tThe string to split\n#\tsepChar\t\tThe separator character, defaults to comma\n#\texpand\t\tThe expansion mode. The default is none\n#\n# Results:\n#\tA list of the values in 'line', written to 'q'.\n\nproc ::csv::split2matrix {args} {\n    # FR #481023\n\n    # Argument syntax:\n    #\n    #2)            m line\n    #3)            m line sepChar\n    #3) -alternate m line\n    #4) -alternate m line sepChar\n    #4)            m line sepChar expand\n    #5) -alternate m line sepChar expand\n\n    set alternate 0\n    set sepChar   ,\n    set expand    none\n\n    switch -exact -- [llength $args] {\n\t2 {\n\t    foreach {m line} $args break\n\t}\n\t3 {\n\t    foreach {a b c} $args break\n\t    if {[string equal $a \"-alternate\"]} {\n\t\tset alternate 1\n\t\tset m         $b\n\t\tset line      $c\n\t    } else {\n\t\tset m       $a\n\t\tset line    $b\n\t\tset sepChar $c\n\t    }\n\t}\n\t4 {\n\t    foreach {a b c d} $args break\n\t    if {[string equal $a \"-alternate\"]} {\n\t\tset alternate 1\n\t\tset m         $b\n\t\tset line      $c\n\t\tset sepChar   $d\n\t    } else {\n\t\tset m       $a\n\t\tset line    $b\n\t\tset sepChar $c\n\t\tset expand  $d\n\t    }\n\t}\n\t4 {\n\t    foreach {a b c d e} $args break\n\t    if {![string equal $a \"-alternate\"]} {\n\t\treturn -code error \"wrong#args: Should be ?-alternate? m line ?separator? ?expand?\"\n\t    }\n\t    set alternate 1\n\n\t    set m       $b\n\t    set line    $c\n\t    set sepChar $d\n\t    set expand  $e\n\t}\n\t0 - 1 -\n\tdefault {\n\t    return -code error \"wrong#args: Should be ?-alternate? m line ?separator? ?expand?\"\n\t}\n    }\n\n    if {[string length $sepChar] < 1} {\n\treturn -code error \"illegal separator character \\\"$sepChar\\\", is empty\"\n    } elseif {[string length $sepChar] > 1} {\n\treturn -code error \"illegal separator character \\\"$sepChar\\\", is a string\"\n    }\n\n    Split2matrix $alternate $m $line $sepChar $expand\n    return\n}\n\nproc ::csv::Split2matrix {alternate m line sepChar expand} {\n    set csv [Split $alternate $line $sepChar]\n\n    # Expansion modes\n    # - none  : default, behaviour of original implementation.\n    #           no expansion is done, lines are silently truncated\n    #           to the number of columns in the matrix.\n    #\n    # - empty : A matrix without columns is expanded to the number\n    #           of columns in the first line added to it. All\n    #           following lines are handled as if \"mode == none\"\n    #           was set.\n    #\n    # - auto  : Full auto-mode. The matrix is expanded as needed to\n    #           hold all columns of all lines.\n\n    switch -exact -- $expand {\n\tnone {}\n\tempty {\n\t    if {[$m columns] == 0} {\n\t\t$m add columns [llength $csv]\n\t    }\n\t}\n\tauto {\n\t    if {[$m columns] < [llength $csv]} {\n\t\t$m add columns [expr {[llength $csv] - [$m columns]}]\n\t    }\n\t}\n    }\n    $m add row $csv\n    return\n}\n\n# ::csv::split2queue --\n#\n#\tSplit a string according to the rules for CSV processing.\n#\tThis assumes that the string contains a single line of CSVs.\n#\tThe resulting list of values is appended to the specified\n#\tqueue, as a single item. IOW each item in the queue represents\n#\ta single CSV record. The code assumes that the queue provides\n#\tthe same interface as the queue provided by the 'struct'\n#\tmodule of tcllib, \"put\" in particular.\n#\n# Arguments:\n#\tq\t\tThe queue to write the resulting list to.\n#\tline\t\tThe string to split\n#\tsepChar\t\tThe separator character, defaults to comma\n#\n# Results:\n#\tA list of the values in 'line', written to 'q'.\n\nproc ::csv::split2queue {args} {\n    # Argument syntax:\n    #\n    #2)            q line\n    #3)            q line sepChar\n    #3) -alternate q line\n    #4) -alternate q line sepChar\n\n    set alternate 0\n    set sepChar   ,\n\n    switch -exact -- [llength $args] {\n\t2 {\n\t    foreach {q line} $args break\n\t}\n\t3 {\n\t    foreach {a b c} $args break\n\t    if {[string equal $a \"-alternate\"]} {\n\t\tset alternate 1\n\t\tset q         $b\n\t\tset line      $c\n\t    } else {\n\t\tset q       $a\n\t\tset line    $b\n\t\tset sepChar $c\n\t    }\n\t}\n\t4 {\n\t    foreach {a b c d} $args break\n\t    if {![string equal $a \"-alternate\"]} {\n\t\treturn -code error \"wrong#args: Should be ?-alternate? q line ?separator?\"\n\t    }\n\t    set alternate 1\n\n\t    set q       $b\n\t    set line    $c\n\t    set sepChar $d\n\t}\n\t0 - 1 -\n\tdefault {\n\t    return -code error \"wrong#args: Should be ?-alternate? q line ?separator?\"\n\t}\n    }\n\n    if {[string length $sepChar] < 1} {\n\treturn -code error \"illegal separator character \\\"$sepChar\\\", is empty\"\n    } elseif {[string length $sepChar] > 1} {\n\treturn -code error \"illegal separator character \\\"$sepChar\\\", is a string\"\n    }\n\n    $q put [Split $alternate $line $sepChar]\n    return\n}\n\n# ::csv::writematrix --\n#\n#\tA wrapper around \"::csv::join\" taking the rows in a matrix and\n#\twriting them as CSV formatted lines into the channel.\n#\n# Arguments:\n#\tm\t\tThe matrix to take the data to write from.\n#\tchan\t\tThe channel to write into.\n#\tsepChar\t\tThe separator character, defaults to comma\n#\n# Results:\n#\tNone.\n\nproc ::csv::writematrix {m chan {sepChar ,} {delChar \\\"}} {\n    set n [$m rows]\n    for {set r 0} {$r < $n} {incr r} {\n\tputs $chan [join [$m get row $r] $sepChar $delChar]\n    }\n\n    # Memory intensive alternative:\n    # puts $chan [joinlist [m get rect 0 0 end end] $sepChar $delChar]\n    return\n}\n\n# ::csv::writequeue --\n#\n#\tA wrapper around \"::csv::join\" taking the rows in a queue and\n#\twriting them as CSV formatted lines into the channel.\n#\n# Arguments:\n#\tq\t\tThe queue to take the data to write from.\n#\tchan\t\tThe channel to write into.\n#\tsepChar\t\tThe separator character, defaults to comma\n#\n# Results:\n#\tNone.\n\nproc ::csv::writequeue {q chan {sepChar ,} {delChar \\\"}} {\n    while {[$q size] > 0} {\n\tputs $chan [join [$q get] $sepChar $delChar]\n    }\n\n    # Memory intensive alternative:\n    # puts $chan [joinlist [$q get [$q size]] $sepChar $delChar]\n    return\n}\n\n"
  },
  {
    "path": "share/tcl/AnnotSV/tcllib/csv/pkgIndex.tcl",
    "content": "if {![package vsatisfies [package provide Tcl] 8.4]} {return}\npackage ifneeded csv 0.8.1 [list source [file join $dir csv.tcl]]\n"
  },
  {
    "path": "share/tcl/AnnotSV/tcllib/http/autoproxy.tcl",
    "content": "# autoproxy.tcl - Copyright (C) 2002-2008 Pat Thoyts <patthoyts@users.sf.net>\n#\n# On Unix the standard for identifying the local HTTP proxy server\n# seems to be to use the environment variable http_proxy or ftp_proxy and\n# no_proxy to list those domains to be excluded from proxying.\n#\n# On Windows we can retrieve the Internet Settings values from the registry\n# to obtain pretty much the same information.\n#\n# With this information we can setup a suitable filter procedure for the\n# Tcl http package and arrange for automatic use of the proxy.\n#\n# Example:\n#   package require autoproxy\n#   autoproxy::init\n#   set tok [http::geturl http://wiki.tcl.tk/]\n#   http::data $tok\n#\n# To support https add:\n#   package require tls\n#   http::register https 443 ::autoproxy::tls_socket\n\npackage require http;                   # tcl\npackage require uri;                    # tcllib\npackage require base64;                 # tcllib\n\nnamespace eval ::autoproxy {\n    variable options\n\n    if {! [info exists options]} {\n        array set options {\n            proxy_host \"\"\n            proxy_port 80\n            no_proxy   {}\n            basic      {}\n            authProc   {}\n        }\n    }\n\n    variable uid\n    if {![info exists uid]} { set uid 0 }\n\n    variable winregkey\n    set winregkey [join {\n        HKEY_CURRENT_USER\n        Software Microsoft Windows\n        CurrentVersion \"Internet Settings\"\n    } \\\\]\n}\n\n# -------------------------------------------------------------------------\n# Description:\n#   Obtain configuration options for the server.\n#\nproc ::autoproxy::cget {option} {\n    variable options\n    switch -glob -- $option {\n        -host -\n        -proxy_h* { set options(proxy_host) }\n        -port -\n        -proxy_p* { set options(proxy_port) }\n        -no*      { set options(no_proxy) }\n        -basic    { set options(basic) }\n        -authProc { set options(authProc) }\n        default {\n            set err [join [lsort [array names options]] \", -\"]\n            return -code error \"bad option \\\"$option\\\":\\\n                       must be one of -$err\"\n        }\n    }\n}\n\n# -------------------------------------------------------------------------\n# Description:\n#  Configure the autoproxy package settings.\n#  You may only configure one type of authorisation at a time as once we hit\n#  -basic, -digest or -ntlm - all further args are passed to the protocol\n#  specific script.\n#\n#  Of course, most of the point of this package is to fill as many of these\n#  fields as possible automatically. You should call autoproxy::init to\n#  do automatic configuration and then call this method to refine the details.\n#\nproc ::autoproxy::configure {args} {\n    variable options\n\n    if {[llength $args] == 0} {\n        foreach {opt value} [array get options] {\n            lappend r -$opt $value\n        }\n        return $r\n    }\n\n    while {[string match \"-*\" [set option [lindex $args 0]]]} {\n        switch -glob -- $option {\n            -host -\n            -proxy_h* { set options(proxy_host) [Pop args 1]}\n            -port -\n            -proxy_p* { set options(proxy_port) [Pop args 1]}\n            -no*      { set options(no_proxy) [Pop args 1] }\n            -basic    { Pop args; configure:basic $args ; break }\n            -authProc { set options(authProc) [Pop args 1] }\n            --        { Pop args; break }\n            default {\n                set opts [join [lsort [array names options]] \", -\"]\n                return -code error \"bad option \\\"$option\\\":\\\n                       must be one of -$opts\"\n            }\n        }\n        Pop args\n    }\n}\n\n# -------------------------------------------------------------------------\n# Description:\n#  Initialise the http proxy information from the environment or the\n#  registry (Win32)\n#\n#  This procedure will load the http package and re-writes the\n#  http::geturl method to add in the authorisation header.\n#\n#  A better solution will be to arrange for the http package to request the\n#  authorisation key on receiving an authorisation reqest.\n#\nproc ::autoproxy::init {{httpproxy {}} {no_proxy {}}} {\n    global tcl_platform\n    global env\n    variable winregkey\n    variable options\n\n    # Look for standard environment variables.\n    if {[string length $httpproxy] > 0} {\n\n        # nothing to do\n\n    } elseif {[info exists env(http_proxy)]} {\n        set httpproxy $env(http_proxy)\n        if {[info exists env(no_proxy)]} {\n            set no_proxy $env(no_proxy)\n        }\n    } else {\n        if {$tcl_platform(platform) == \"windows\"} {\n            #checker -scope block exclude nonPortCmd\n            package require registry 1.0\n            array set reg {ProxyEnable 0 ProxyServer \"\" ProxyOverride {}}\n            catch {\n                # IE5 changed ProxyEnable from a binary to a dword value.\n                switch -exact -- [registry type $winregkey \"ProxyEnable\"] {\n                    dword {\n                        set reg(ProxyEnable) [registry get $winregkey \"ProxyEnable\"]\n                    }\n                    binary {\n                        set v [registry get $winregkey \"ProxyEnable\"]\n                        binary scan $v i reg(ProxyEnable)\n                    }\n                    default {\n                        return -code error \"unexpected type found for\\\n                               ProxyEnable registry item\"\n                    }\n                }\n                set reg(ProxyServer) [GetWin32Proxy http]\n                set reg(ProxyOverride) [registry get $winregkey \"ProxyOverride\"]\n            }\n            if {![string is bool $reg(ProxyEnable)]} {\n                set reg(ProxyEnable) 0\n            }\n            if {$reg(ProxyEnable)} {\n                set httpproxy $reg(ProxyServer)\n                set no_proxy  $reg(ProxyOverride)\n            }\n        }\n    }\n\n    # If we found something ...\n    if {[string length $httpproxy] > 0} {\n        # The http_proxy is supposed to be a URL - lets make sure.\n        if {![regexp {\\w://.*} $httpproxy]} {\n            set httpproxy \"http://$httpproxy\"\n        }\n\n        # decompose the string.\n        array set proxy [uri::split $httpproxy]\n\n        # turn the no_proxy value into a tcl list\n        set no_proxy [string map {; \" \" , \" \"} $no_proxy]\n\n        # configure ourselves\n        configure -proxy_host $proxy(host) \\\n            -proxy_port $proxy(port) \\\n            -no_proxy $no_proxy\n\n        # Lift the authentication details from the environment if present.\n        if {[string length $proxy(user)] < 1 \\\n                && [info exists env(http_proxy_user)] \\\n                && [info exists env(http_proxy_pass)]} {\n            set proxy(user) $env(http_proxy_user)\n            set proxy(pwd)  $env(http_proxy_pass)\n        }\n\n        # Maybe the proxy url has authentication parameters?\n        # At this time, only Basic is supported.\n        if {[string length $proxy(user)] > 0} {\n            configure -basic -username $proxy(user) -password $proxy(pwd)\n        }\n\n        # setup and configure the http package to use our proxy info.\n        http::config -proxyfilter [namespace origin filter]\n    }\n    return $httpproxy\n}\n\n# autoproxy::GetWin32Proxy --\n#\n#\tParse the Windows Internet Settings registry key and return the\n#\tprotocol proxy requested. If the same proxy is in use for all\n#\tprotocols, then that will be returned. Otherwise the string is\n#\tparsed. Example:\n#\t ftp=proxy:80;http=proxy:80;https=proxy:80\n#\nproc ::autoproxy::GetWin32Proxy {protocol} {\n    variable winregkey\n    #checker exclude nonPortCmd\n    set proxies [split [registry get $winregkey \"ProxyServer\"] \";\"]\n    foreach proxy $proxies {\n        if {[string first = $proxy] == -1} {\n            return $proxy\n        } else {\n            foreach {prot host} [split $proxy =] break\n            if {[string compare $protocol $prot] == 0} {\n                return $host\n            }\n        }\n    }\n    return -code error \"failed to identify an '$protocol' proxy\"\n}\n\n# -------------------------------------------------------------------------\n# Description:\n#  Pop the nth element off a list. Used in options processing.\nproc ::autoproxy::Pop {varname {nth 0}} {\n    upvar $varname args\n    set r [lindex $args $nth]\n    set args [lreplace $args $nth $nth]\n    return $r\n}\n\n# -------------------------------------------------------------------------\n# Description\n#   An example user authentication procedure.\n# Returns:\n#   A two element list consisting of the users authentication id and\n#   password.\nproc ::autoproxy::defAuthProc {{user {}} {passwd {}} {realm {}}} {\n    if {[string length $realm] > 0} {\n        set title \"Realm: $realm\"\n    } else {\n        set title {}\n    }\n\n    # If you are using BWidgets then the following will do:\n    #\n    #    package require BWidget\n    #    return [PasswdDlg .defAuthDlg -parent {} -transient 0 \\\n    #         -title $title -logintext $user -passwdtext $passwd]\n    #\n    # if you just have Tk and no BWidgets --\n\n    set dlg [toplevel .autoproxy_defAuthProc -class Dialog]\n    wm title $dlg $title\n    wm withdraw $dlg\n    label $dlg.ll -text Login -underline 0 -anchor w\n    entry $dlg.le -textvariable [namespace current]::${dlg}:l\n    label $dlg.pl -text Password -underline 0 -anchor w\n    entry $dlg.pe -show * -textvariable [namespace current]::${dlg}:p\n    button $dlg.ok -text OK -default active -width -11 \\\n        -command [list set [namespace current]::${dlg}:ok 1]\n    grid $dlg.ll $dlg.le -sticky news\n    grid $dlg.pl $dlg.pe -sticky news\n    grid $dlg.ok - -sticky e\n    grid columnconfigure $dlg 1 -weight 1\n    bind $dlg <Return> [list $dlg.ok invoke]\n    bind $dlg <Alt-l> [list focus $dlg.le]\n    bind $dlg <Alt-p> [list focus $dlg.pe]\n    variable ${dlg}:l $user; variable ${dlg}:p $passwd\n    variable ${dlg}:ok 0\n    wm deiconify $dlg; focus $dlg.pe; update idletasks\n    set old [::grab current]; grab $dlg\n    tkwait variable [namespace current]::${dlg}:ok\n    grab release $dlg ; if {[llength $old] > 0} {::grab $old}\n    set r [list [set ${dlg}:l] [set ${dlg}:p]]\n    unset ${dlg}:l; unset ${dlg}:p; unset ${dlg}:ok\n    destroy $dlg\n    return $r\n}\n\n# -------------------------------------------------------------------------\n\n# Description:\n#  Implement support for the Basic authentication scheme (RFC 1945,2617).\n# Options:\n#  -user userid  - pass in the user ID (May require Windows NT domain\n#                  as DOMAIN\\\\username)\n#  -password pwd - pass in the user's password.\n#  -realm realm  - pass in the http realm.\n#\nproc ::autoproxy::configure:basic {arglist} {\n    variable options\n    array set opts {user {} passwd {} realm {}}\n    foreach {opt value} $arglist {\n        switch -glob -- $opt {\n            -u* { set opts(user) $value}\n            -p* { set opts(passwd) $value}\n            -r* { set opts(realm) $value}\n            default {\n                return -code error \"invalid option \\\"$opt\\\": must be one of\\\n                     -username or -password or -realm\"\n            }\n        }\n    }\n\n    # If nothing was provided, try calling the authProc\n    if {$options(authProc) != {} \\\n            && ($opts(user) == {} || $opts(passwd) == {})} {\n        set r [$options(authProc) $opts(user) $opts(passwd) $opts(realm)]\n        set opts(user) [lindex $r 0]\n        set opts(passwd) [lindex $r 1]\n    }\n\n    # Store the encoded string to avoid re-encoding all the time.\n    set options(basic) [list \"Proxy-Authorization\" \\\n                            [concat \"Basic\" \\\n                                 [base64::encode $opts(user):$opts(passwd)]]]\n    return\n}\n\n# -------------------------------------------------------------------------\n# Description:\n#  An http package proxy filter. This attempts to work out if a request\n#  should go via the configured proxy using a glob comparison against the\n#  no_proxy list items. A typical no_proxy list might be\n#   [list localhost *.my.domain.com 127.0.0.1]\n#\n#  If we are going to use the proxy - then insert the proxy authorization\n#  header.\n#\nproc ::autoproxy::filter {host} {\n    variable options\n\n    if {$options(proxy_host) == {}} {\n        return {}\n    }\n\n    foreach domain $options(no_proxy) {\n        if {[string match $domain $host]} {\n            return {}\n        }\n    }\n\n    # Add authorisation header to the request (by Anders Ramdahl)\n    catch {\n        upvar state State\n        if {$options(basic) != {}} {\n            set State(-headers) [concat $options(basic) $State(-headers)]\n        }\n    }\n    return [list $options(proxy_host) $options(proxy_port)]\n}\n\n# -------------------------------------------------------------------------\n# autoproxy::tls_connect --\n#\n#\tCreate a connection to a remote machine through a proxy\n#\tif necessary. This is used by the tls_socket command for\n#\tuse with the http package but can also be used more generally\n#\tprovided your proxy will permit CONNECT attempts to ports\n#\tother than port 443 (many will not).\n#\tThis command defers to 'tunnel_connect' to link to the target\n#\thost and then upgrades the link to SSL/TLS\n#\nproc ::autoproxy::tls_connect {args} {\n    variable options\n    if {[string length $options(proxy_host)] > 0} {\n        set s [eval [linsert $args 0 tunnel_connect]]\n        fconfigure $s -blocking 1 -buffering none -translation binary\n        if {[string equal \"-async\" [lindex $args end-2]]} {\n            eval [linsert [lrange $args 0 end-3] 0 ::tls::import $s]\n        } else {\n            eval [linsert [lrange $args 0 end-2] 0 ::tls::import $s]\n        }\n    } else {\n        set s [eval [linsert $args 0 ::tls::socket]]\n    }\n    return $s\n}\n\n# autoproxy::tunnel_connect --\n#\n#\tCreate a connection to a remote machine through a proxy\n#\tif necessary. This is used by the tls_socket command for\n#\tuse with the http package but can also be used more generally\n#\tprovided your proxy will permit CONNECT attempts to ports\n#\tother than port 443 (many will not).\n#\tNote: this command just opens the socket through the proxy to\n#\tthe target machine -- no SSL/TLS negotiation is done yet.\n#\nproc ::autoproxy::tunnel_connect {args} {\n    variable options\n    variable uid\n    set code ok\n\n    # args = ... host port\n    # and the host/port is the actual endpoint we want to talk to,\n    # regardless of any proxying. See our caller tls_connect for\n    # ensuring this by peeking into the http package internals.\n\n    # To handle proxying properly we have to run through 'filter'\n    # (again), to ensure that proxy exceptions are correctly taken\n    # into account.\n\n    set proxy [filter [lindex $args end-1]]\n\n    if {[llength $proxy]} {\n        foreach {proxy_host proxy_port} $proxy break\n\n        set token [namespace current]::[incr uid]\n        upvar #0 $token state\n        set state(endpoint) [lrange $args end-1 end]\n        set state(state) connect\n        set state(data) \"\"\n        set state(useragent) [http::config -useragent]\n        set state(sock) [::socket $proxy_host $proxy_port]\n        fileevent $state(sock) writable [namespace code [list tunnel_write $token]]\n        vwait [set token](state)\n\n        if {[string length $state(error)] > 0} {\n            set result $state(error)\n            close $state(sock)\n            unset state\n            set code error\n        } elseif {[info exists state(code)] &&\n                  (($state(code) >= 300) ||\n                   ($state(code) < 200))} {\n            set result [lindex $state(headers) 0]\n            regexp {HTTP/\\d.\\d\\s+\\d+\\s+(.*)} $result -> result\n            close $state(sock)\n            set code error\n        } else {\n            set result $state(sock)\n        }\n        unset state\n    } else {\n        set result [eval [linsert $args 0 ::socket]]\n    }\n    return -code $code $result\n}\n\nproc ::autoproxy::tunnel_write {token} {\n    upvar #0 $token state\n    variable options\n    fileevent $state(sock) writable {}\n    if {[catch {set state(error) [fconfigure $state(sock) -error]} err]} {\n        set state(error) $err\n    }\n    if {[string length $state(error)] > 0} {\n        set state(state) error\n        return\n    }\n    fconfigure $state(sock) -blocking 0 -buffering line -translation crlf\n    foreach {host port} $state(endpoint) break\n    puts $state(sock) \"CONNECT $host:$port HTTP/1.1\"\n    puts $state(sock) \"Host: $host\"\n    if {[string length $state(useragent)] > 0} {\n        puts $state(sock) \"User-Agent: $state(useragent)\"\n    }\n    puts $state(sock) \"Proxy-Connection: keep-alive\"\n    puts $state(sock) \"Connection: keep-alive\"\n    if {[string length $options(basic)] > 0} {\n        puts $state(sock) [join $options(basic) \": \"]\n    }\n    puts $state(sock) \"\"\n\n    fileevent $state(sock) readable [namespace code [list tunnel_read $token]]\n    return\n}\n\nproc ::autoproxy::tunnel_read {token} {\n    upvar #0 $token state\n    set len [gets $state(sock) line]\n    if {[eof $state(sock)]} {\n        fileevent $state(sock) readable {}\n        set state(state) eof\n    } elseif {$len == 0} {\n        set state(code) [lindex [split [lindex $state(headers) 0] { }] 1]\n        fileevent $state(sock) readable {}\n        set state(state) ok\n    } else {\n        lappend state(headers) $line\n    }\n}\n\n# autoproxy::tls_socket --\n#\n#\tThis can be used to handle TLS connections independently of\n#\tproxy presence. It can only be used with the Tcl http package\n#\tand to use it you must do:\n#\t   http::register https 443 ::autoproxy::tls_socket\n#\tAfter that you can use the http::geturl command to access\n#\tsecure web pages and any proxy details will be handled for you.\n#\nproc ::autoproxy::tls_socket {args} {\n    variable options\n\n    # Look into the http package for the actual target. If a proxy is in use then\n    # The function appends the proxy host and port and not the target.\n\n    upvar host uhost port uport\n    set args [lrange $args 0 end-2]\n    lappend args $uhost $uport\n\n    set s [eval [linsert $args 0 tls_connect]]\n\n    # record the tls connection status in the http state array.\n    upvar state state\n    tls::handshake $s\n    set state(tls_status) [tls::status $s]\n\n    return $s\n}\n\n# -------------------------------------------------------------------------\n\npackage provide autoproxy 1.5.3\n\n# -------------------------------------------------------------------------\n#\n# Local variables:\n#   mode: tcl\n#   indent-tabs-mode: nil\n# End:\n"
  },
  {
    "path": "share/tcl/AnnotSV/tcllib/http/pkgIndex.tcl",
    "content": "if {![package vsatisfies [package provide Tcl] 8.2]} {return}\npackage ifneeded autoproxy 1.5.3 [list source [file join $dir autoproxy.tcl]]\n"
  },
  {
    "path": "share/tcl/AnnotSV/tcllib/json/json.tcl",
    "content": "# json.tcl --\n#\n#\tJSON parser for Tcl. Management code, Tcl/C detection and selection.\n#\n# Copyright (c) 2013 by Andreas Kupries\n\n# @mdgen EXCLUDE: jsonc.tcl\n\npackage require Tcl 8.4\nnamespace eval ::json {}\n\n# ### ### ### ######### ######### #########\n## Management of json implementations.\n\n# ::json::LoadAccelerator --\n#\n#\tLoads a named implementation, if possible.\n#\n# Arguments:\n#\tkey\tName of the implementation to load.\n#\n# Results:\n#\tA boolean flag. True if the implementation\n#\twas successfully loaded; and False otherwise.\n\nproc ::json::LoadAccelerator {key} {\n    variable accel\n    set r 0\n    switch -exact -- $key {\n\tcritcl {\n\t    # Critcl implementation of json requires Tcl 8.4.\n\t    if {![package vsatisfies [package provide Tcl] 8.4]} {return 0}\n\t    if {[catch {package require tcllibc}]} {return 0}\n\t    # Check for the jsonc 1.1.1 API we are fixing later.\n\t    set r [llength [info commands ::json::many_json2dict_critcl]]\n\t}\n\ttcl {\n\t    variable selfdir\n\t    source [file join $selfdir json_tcl.tcl]\n\t    set r 1\n\t}\n        default {\n            return -code error \"invalid accelerator/impl. package $key:\\\n                must be one of [join [KnownImplementations] {, }]\"\n        }\n    }\n    set accel($key) $r\n    return $r\n}\n\n# ::json::SwitchTo --\n#\n#\tActivates a loaded named implementation.\n#\n# Arguments:\n#\tkey\tName of the implementation to activate.\n#\n# Results:\n#\tNone.\n\nproc ::json::SwitchTo {key} {\n    variable accel\n    variable loaded\n    variable apicmds\n\n    if {[string equal $key $loaded]} {\n\t# No change, nothing to do.\n\treturn\n    } elseif {![string equal $key \"\"]} {\n\t# Validate the target implementation of the switch.\n\n\tif {![info exists accel($key)]} {\n\t    return -code error \"Unable to activate unknown implementation \\\"$key\\\"\"\n\t} elseif {![info exists accel($key)] || !$accel($key)} {\n\t    return -code error \"Unable to activate missing implementation \\\"$key\\\"\"\n\t}\n    }\n\n    # Deactivate the previous implementation, if there was any.\n\n    if {![string equal $loaded \"\"]} {\n\tforeach c $apicmds {\n\t    rename ::json::${c} ::json::${c}_$loaded\n\t}\n    }\n\n    # Activate the new implementation, if there is any.\n\n    if {![string equal $key \"\"]} {\n\tforeach c $apicmds {\n\t    rename ::json::${c}_$key ::json::${c}\n\t}\n    }\n\n    # Remember the active implementation, for deactivation by future\n    # switches.\n\n    set loaded $key\n    return\n}\n\n# ::json::Implementations --\n#\n#\tDetermines which implementations are\n#\tpresent, i.e. loaded.\n#\n# Arguments:\n#\tNone.\n#\n# Results:\n#\tA list of implementation keys.\n\nproc ::json::Implementations {} {\n    variable accel\n    set res {}\n    foreach n [array names accel] {\n\tif {!$accel($n)} continue\n\tlappend res $n\n    }\n    return $res\n}\n\n# ::json::KnownImplementations --\n#\n#\tDetermines which implementations are known\n#\tas possible implementations.\n#\n# Arguments:\n#\tNone.\n#\n# Results:\n#\tA list of implementation keys. In the order\n#\tof preference, most prefered first.\n\nproc ::json::KnownImplementations {} {\n    return {critcl tcl}\n}\n\nproc ::json::Names {} {\n    return {\n\tcritcl {tcllibc based}\n\ttcl    {pure Tcl}\n    }\n}\n\n# ### ### ### ######### ######### #########\n## Initialization: Data structures.\n\nnamespace eval ::json {\n    variable  selfdir [file dirname [info script]]\n    variable  accel\n    array set accel   {tcl 0 critcl 0}\n    variable  loaded  {}\n\n    variable apicmds {\n\tjson2dict\n\tmany-json2dict\n    }\n}\n\n# ### ### ### ######### ######### #########\n## Wrapper fix for the jsonc package to match APIs.\n\nproc ::json::many-json2dict_critcl {args} {\n    eval [linsert $args 0 ::json::many_json2dict_critcl]\n}\n\n# ### ### ### ######### ######### #########\n## Initialization: Choose an implementation,\n## most prefered first. Loads only one of the\n## possible implementations. And activates it.\n\nnamespace eval ::json {\n    variable e\n    foreach e [KnownImplementations] {\n\tif {[LoadAccelerator $e]} {\n\t    SwitchTo $e\n\t    break\n\t}\n    }\n    unset e\n}\n\n# ### ### ### ######### ######### #########\n## Tcl implementation of validation, shared for Tcl and C implementation.\n##\n## The regexp based validation is consistently faster than json-c.\n## Suspected reasons: Tcl REs are mainly in C as well, and json-c has\n## overhead in constructing its own data structures. While irrelevant\n## to validation json-c still builds them, it has no mode doing pure\n## syntax checking.\n\nnamespace eval ::json {\n    # Regular expression for tokenizing a JSON text (cf. http://json.org/)\n\n    # tokens consisting of a single character\n    variable singleCharTokens { \"{\" \"}\" \":\" \"\\\\[\" \"\\\\]\" \",\" }\n    variable singleCharTokenRE \"\\[[join $singleCharTokens {}]\\]\"\n\n    # quoted string tokens\n    variable escapableREs { \"[\\\\\\\"\\\\\\\\/bfnrt]\" \"u[[:xdigit:]]{4}\" \".\" }\n    variable escapedCharRE \"\\\\\\\\(?:[join $escapableREs |])\"\n    variable unescapedCharRE {[^\\\\\\\"]}\n    variable stringRE \"\\\"(?:$escapedCharRE|$unescapedCharRE)*\\\"\"\n\n    # as above, for validation\n    variable escapableREsv { \"[\\\\\\\"\\\\\\\\/bfnrt]\" \"u[[:xdigit:]]{4}\" }\n    variable escapedCharREv \"\\\\\\\\(?:[join $escapableREsv |])\"\n    variable stringREv \"\\\"(?:$escapedCharREv|$unescapedCharRE)*\\\"\"\n\n    # (unquoted) words\n    variable wordTokens { \"true\" \"false\" \"null\" }\n    variable wordTokenRE [join $wordTokens \"|\"]\n\n    # number tokens\n    # negative lookahead (?!0)[[:digit:]]+ might be more elegant, but\n    # would slow down tokenizing by a factor of up to 3!\n    variable positiveRE {[1-9][[:digit:]]*}\n    variable cardinalRE \"-?(?:$positiveRE|0)\"\n    variable fractionRE {[.][[:digit:]]+}\n    variable exponentialRE {[eE][+-]?[[:digit:]]+}\n    variable numberRE \"${cardinalRE}(?:$fractionRE)?(?:$exponentialRE)?\"\n\n    # JSON token, and validation\n    variable tokenRE \"$singleCharTokenRE|$stringRE|$wordTokenRE|$numberRE\"\n    variable tokenREv \"$singleCharTokenRE|$stringREv|$wordTokenRE|$numberRE\"\n\n\n    # 0..n white space characters\n    set whiteSpaceRE {[[:space:]]*}\n\n    # Regular expression for validating a JSON text\n    variable validJsonRE \"^(?:${whiteSpaceRE}(?:$tokenREv))*${whiteSpaceRE}$\"\n}\n\n\n# Validate JSON text\n# @param jsonText JSON text\n# @return 1 iff $jsonText conforms to the JSON grammar\n#           (@see http://json.org/)\nproc ::json::validate {jsonText} {\n    variable validJsonRE\n\n    return [regexp -- $validJsonRE $jsonText]\n}\n\n# ### ### ### ######### ######### #########\n## These three procedures shared between Tcl and Critcl implementations.\n## See also package \"json::write\".\n\n#lm ATTENTION !\n#lm Taken from wiki.tcl.tk\nproc ::json::dict2json {dictionary} {\n    dict for {key value} $dictionary {\n        if {[string match {\\[*\\]} $value]} {\n            lappend Result \"\\\"$key\\\":$value\"\n        } elseif {![catch {dict size $value}]} {\n            lappend Result \"\\\"$key\\\":\\\"[dict2json $value]\\\"\"\n        } else {\n            lappend Result \"\\\"$key\\\":\\\"$value\\\"\"\n        }\n    }\n    return \"\\{[join $Result \",\\n\"]\\}\"\n}\n\nproc ::json::dict2json_old {dictVal} {\n    # XXX: Currently this API isn't symmetrical, as to create proper\n    # XXX: JSON text requires type knowledge of the input data\n    set json \"\"\n    set prefix \"\"\n\n    foreach {key val} $dictVal {\n\t# key must always be a string, val may be a number, string or\n\t# bare word (true|false|null)\n\tif {0 && ![string is double -strict $val]\n\t    && ![regexp {^(?:true|false|null)$} $val]} {\n\t    set val \"\\\"$val\\\"\"\n\t}\n    \tappend json \"$prefix\\\"$key\\\": $val\" \\n\n\tset prefix ,\n    }\n\n    return \"\\{${json}\\}\"\n}\n\nproc ::json::list2json {listVal} {\n    return \"\\[[join $listVal ,]\\]\"\n}\n\nproc ::json::string2json {str} {\n    return \"\\\"$str\\\"\"\n}\n\n# ### ### ### ######### ######### #########\n## Ready\n\npackage provide json 1.3.3\n"
  },
  {
    "path": "share/tcl/AnnotSV/tcllib/json/json_tcl.tcl",
    "content": "#\n#   JSON parser for Tcl.\n#\n#   See http://www.json.org/ && http://www.ietf.org/rfc/rfc4627.txt\n#\n#   Total rework of the code published with version number 1.0 by\n#   Thomas Maeder, Glue Software Engineering AG\n#\n#   $Id: json.tcl,v 1.7 2011/11/10 21:05:58 andreas_kupries Exp $\n#\n\nif {![package vsatisfies [package provide Tcl] 8.5]} {\n    package require dict\n}\n\n# Parse JSON text into a dict\n# @param jsonText JSON text\n# @return dict (or list) containing the object represented by $jsonText\nproc ::json::json2dict_tcl {jsonText} {\n    variable tokenRE\n\n    set tokens [regexp -all -inline -- $tokenRE $jsonText]\n    set nrTokens [llength $tokens]\n    set tokenCursor 0\n\n#puts T:\\t[join $tokens \\nT:\\t]\n    return [parseValue $tokens $nrTokens tokenCursor]\n}\n\n# Parse multiple JSON entities in a string into a list of dictionaries\n# @param jsonText JSON text to parse\n# @param max      Max number of entities to extract.\n# @return list of (dict (or list) containing the objects) represented by $jsonText\nproc ::json::many-json2dict_tcl {jsonText {max -1}} {\n    variable tokenRE\n\n    if {$max == 0} {\n\treturn -code error -errorCode {JSON BAD-LIMIT ZERO} \\\n\t    \"Bad limit 0 of json entities to extract.\"\n    }\n\n    set tokens [regexp -all -inline -- $tokenRE $jsonText]\n    set nrTokens [llength $tokens]\n    set tokenCursor 0\n\n    set result {}\n    set found 0\n    set n $max\n    while {$n != 0} {\n\tif {$tokenCursor >= $nrTokens} break\n\tlappend result [parseValue $tokens $nrTokens tokenCursor]\n\tincr found\n\tif {$n > 0} {incr n -1}\n    }\n\n    if {$n > 0} {\n\treturn -code error -errorCode {JSON BAD-LIMIT TOO LARGE} \\\n\t    \"Bad limit $max of json entities to extract, found only $found.\"\n    }\n\n    return $result\n}\n\n# Throw an exception signaling an unexpected token\nproc ::json::unexpected {tokenCursor token expected} {\n    return -code error -errorcode [list JSON UNEXPECTED $tokenCursor $expected] \\\n\t\"unexpected token \\\"$token\\\" at position $tokenCursor; expecting $expected\"\n}\n\n# Get rid of the quotes surrounding a string token and substitute the\n# real characters for escape sequences within it\n# @param token\n# @return unquoted unescaped value of the string contained in $token\nproc ::json::unquoteUnescapeString {tokenCursor token} {\n    variable stringREv\n    set unquoted [string range $token 1 end-1]\n\n    if {![regexp $stringREv $token]} {\n\tunexpected $tokenCursor $token STRING\n    }\n\n    set res [subst -nocommands -novariables $unquoted]\n    return $res\n}\n\n# Parse an object member\n# @param tokens list of tokens\n# @param nrTokens length of $tokens\n# @param tokenCursorName name (in caller's context) of variable\n#                        holding current position in $tokens\n# @param objectDictName name (in caller's context) of dict\n#                       representing the JSON object of which to\n#                       parse the next member\nproc ::json::parseObjectMember {tokens nrTokens tokenCursorName objectDictName} {\n    upvar $tokenCursorName tokenCursor\n    upvar $objectDictName objectDict\n\n    set token [lindex $tokens $tokenCursor]\n    set tc $tokenCursor\n    incr tokenCursor\n\n    set leadingChar [string index $token 0]\n    if {$leadingChar eq \"\\\"\"} {\n        set memberName [unquoteUnescapeString $tc $token]\n\n        if {$tokenCursor == $nrTokens} {\n            unexpected $tokenCursor \"END\" \"\\\":\\\"\"\n        } else {\n            set token [lindex $tokens $tokenCursor]\n            incr tokenCursor\n\n            if {$token eq \":\"} {\n                set memberValue [parseValue $tokens $nrTokens tokenCursor]\n                dict set objectDict $memberName $memberValue\n            } else {\n                unexpected $tokenCursor $token \"\\\":\\\"\"\n            }\n        }\n    } else {\n        unexpected $tokenCursor $token \"STRING\"\n    }\n}\n\n# Parse the members of an object\n# @param tokens list of tokens\n# @param nrTokens length of $tokens\n# @param tokenCursorName name (in caller's context) of variable\n#                        holding current position in $tokens\n# @param objectDictName name (in caller's context) of dict\n#                       representing the JSON object of which to\n#                       parse the next member\nproc ::json::parseObjectMembers {tokens nrTokens tokenCursorName objectDictName} {\n    upvar $tokenCursorName tokenCursor\n    upvar $objectDictName objectDict\n\n    while true {\n        parseObjectMember $tokens $nrTokens tokenCursor objectDict\n\n        set token [lindex $tokens $tokenCursor]\n        incr tokenCursor\n\n        switch -exact $token {\n            \",\" {\n                # continue\n            }\n            \"\\}\" {\n                break\n            }\n            default {\n                unexpected $tokenCursor $token \"\\\",\\\"|\\\"\\}\\\"\"\n            }\n        }\n    }\n}\n\n# Parse an object\n# @param tokens list of tokens\n# @param nrTokens length of $tokens\n# @param tokenCursorName name (in caller's context) of variable\n#                        holding current position in $tokens\n# @return parsed object (Tcl dict)\nproc ::json::parseObject {tokens nrTokens tokenCursorName} {\n    upvar $tokenCursorName tokenCursor\n\n    if {$tokenCursor == $nrTokens} {\n        unexpected $tokenCursor \"END\" \"OBJECT\"\n    } else {\n        set result [dict create]\n\n        set token [lindex $tokens $tokenCursor]\n\n        if {$token eq \"\\}\"} {\n            # empty object\n            incr tokenCursor\n        } else {\n            parseObjectMembers $tokens $nrTokens tokenCursor result\n        }\n\n        return $result\n    }\n}\n\n# Parse the elements of an array\n# @param tokens list of tokens\n# @param nrTokens length of $tokens\n# @param tokenCursorName name (in caller's context) of variable\n#                        holding current position in $tokens\n# @param resultName name (in caller's context) of the list\n#                   representing the JSON array\nproc ::json::parseArrayElements {tokens nrTokens tokenCursorName resultName} {\n    upvar $tokenCursorName tokenCursor\n    upvar $resultName result\n\n    while true {\n        lappend result [parseValue $tokens $nrTokens tokenCursor]\n\n        if {$tokenCursor == $nrTokens} {\n            unexpected $tokenCursor \"END\" \"\\\",\\\"|\\\"\\]\\\"\"\n        } else {\n            set token [lindex $tokens $tokenCursor]\n            incr tokenCursor\n\n            switch -exact $token {\n                \",\" {\n                    # continue\n                }\n                \"\\]\" {\n                    break\n                }\n                default {\n                    unexpected $tokenCursor $token \"\\\",\\\"|\\\"\\]\\\"\"\n                }\n            }\n        }\n    }\n}\n\n# Parse an array\n# @param tokens list of tokens\n# @param nrTokens length of $tokens\n# @param tokenCursorName name (in caller's context) of variable\n#                        holding current position in $tokens\n# @return parsed array (Tcl list)\nproc ::json::parseArray {tokens nrTokens tokenCursorName} {\n    upvar $tokenCursorName tokenCursor\n\n    if {$tokenCursor == $nrTokens} {\n        unexpected $tokenCursor \"END\" \"ARRAY\"\n    } else {\n        set result {}\n\n        set token [lindex $tokens $tokenCursor]\n\n        set leadingChar [string index $token 0]\n        if {$leadingChar eq \"\\]\"} {\n            # empty array\n            incr tokenCursor\n        } else {\n            parseArrayElements $tokens $nrTokens tokenCursor result\n        }\n\n        return $result\n    }\n}\n\n# Parse a value\n# @param tokens list of tokens\n# @param nrTokens length of $tokens\n# @param tokenCursorName name (in caller's context) of variable\n#                        holding current position in $tokens\n# @return parsed value (dict, list, string, number)\nproc ::json::parseValue {tokens nrTokens tokenCursorName} {\n    upvar $tokenCursorName tokenCursor\n\n    if {$tokenCursor == $nrTokens} {\n        unexpected $tokenCursor \"END\" \"VALUE\"\n    } else {\n        set token [lindex $tokens $tokenCursor]\n\tset tc $tokenCursor\n        incr tokenCursor\n\n        set leadingChar [string index $token 0]\n        switch -exact -- $leadingChar {\n            \"\\{\" {\n                return [parseObject $tokens $nrTokens tokenCursor]\n            }\n            \"\\[\" {\n                return [parseArray $tokens $nrTokens tokenCursor]\n            }\n            \"\\\"\" {\n                # quoted string\n                return [unquoteUnescapeString $tc $token]\n            }\n            \"t\" -\n            \"f\" -\n            \"n\" {\n                # bare word: true, false, null (return as is)\n                return $token\n            }\n            default {\n                # number?\n                if {[string is double -strict $token]} {\n                    return $token\n                } else {\n                    unexpected $tokenCursor $token \"VALUE\"\n                }\n            }\n        }\n    }\n}\n"
  },
  {
    "path": "share/tcl/AnnotSV/tcllib/json/json_write.tcl",
    "content": "# json_write.tcl --\n#\n#\tCommands for the generation of JSON (Java Script Object Notation).\n#\n# Copyright (c) 2009-2011 Andreas Kupries <andreas_kupries@sourceforge.net>\n#\n# See the file \"license.terms\" for information on usage and redistribution\n# of this file, and for a DISCLAIMER OF ALL WARRANTIES.\n# \n# RCS: @(#) $Id: json_write.tcl,v 1.2 2011/08/24 20:09:44 andreas_kupries Exp $\n\n# ### ### ### ######### ######### #########\n## Requisites\n\npackage require Tcl 8.5\n\nnamespace eval ::json::write {\n    namespace export \\\n\tstring array object indented aligned\n\n    namespace ensemble create\n}\n\n# ### ### ### ######### ######### #########\n## API.\n\nproc ::json::write::indented {{bool {}}} {\n    variable indented\n\n    if {[llength [info level 0]] > 2} {\n\treturn -code error {wrong # args: should be \"json::write indented ?bool?\"}\n    } elseif {[llength [info level 0]] == 2} {\n\tif {![::string is boolean -strict $bool]} {\n\t    return -code error \"Expected boolean, got \\\"$bool\\\"\"\n\t}\n\tset indented $bool\n\tif {!$indented} {\n\t    variable aligned 0\n\t}\n    }\n\n    return $indented\n}\n\nproc ::json::write::aligned {{bool {}}} {\n    variable aligned\n\n    if {[llength [info level 0]] > 2} {\n\treturn -code error {wrong # args: should be \"json::write aligned ?bool?\"}\n    } elseif {[llength [info level 0]] == 2} {\n\tif {![::string is boolean -strict $bool]} {\n\t    return -code error \"Expected boolean, got \\\"$bool\\\"\"\n\t}\n\tset aligned $bool\n\tif {$aligned} {\n\t    variable indented 1\n\t}\n    }\n\n    return $aligned\n}\n\nproc ::json::write::string {s} {\n    variable quotes\n    return \"\\\"[::string map $quotes $s]\\\"\"\n}\n\nproc ::json::write::array {args} {\n    # always compact form.\n    return \"\\[[join $args ,]\\]\"\n}\n\nproc ::json::write::object {args} {\n    # The dict in args maps string keys to json-formatted data. I.e.\n    # we have to quote the keys, but not the values, as the latter are\n    # already in the proper format.\n\n    variable aligned\n    variable indented\n\n    if {[llength $args] %2 == 1} {\n\treturn -code error {wrong # args, expected an even number of arguments}\n    }\n\n    set dict {}\n    foreach {k v} $args {\n\tlappend dict [string $k] $v\n    }\n\n    if {$aligned} {\n\tset max [MaxKeyLength $dict]\n    }\n\n    if {$indented} {\n\tset content {}\n\tforeach {k v} $dict {\n\t    if {$aligned} {\n\t\tset k [AlignLeft $max $k]\n\t    }\n\t    if {[::string match *\\n* $v]} {\n\t\t# multi-line value\n\t\tlappend content \"    $k : [Indent $v {    } 1]\"\n\t    } else {\n\t\t# single line value.\n\t\tlappend content \"    $k : $v\"\n\t    }\n\t}\n\tif {[llength $content]} {\n\t    return \"\\{\\n[join $content ,\\n]\\n\\}\"\n\t} else {\n\t    return \"\\{\\}\"\n\t}\n    } else {\n\t# ultra compact form.\n\tset tmp {}\n\tforeach {k v} $dict {\n\t    lappend tmp \"$k:$v\"\n\t}\n\treturn \"\\{[join $tmp ,]\\}\"\n    }\n}\n\n# ### ### ### ######### ######### #########\n## Internals.\n\nproc ::json::write::Indent {text prefix skip} {\n    set pfx \"\"\n    set result {}\n    foreach line [split $text \\n] {\n\tif {!$skip} { set pfx $prefix } else { incr skip -1 }\n\tlappend result ${pfx}$line\n    }\n    return [join $result \\n]\n}\n\nproc ::json::write::MaxKeyLength {dict} {\n    # Find the max length of the keys in the dictionary.\n\n    set lengths 0 ; # This will be the max if the dict is empty, and\n\t\t    # prevents the mathfunc from throwing errors for\n\t\t    # that case.\n\n    foreach str [dict keys $dict] {\n\tlappend lengths [::string length $str]\n    }\n\n    return [tcl::mathfunc::max {*}$lengths]\n}\n\nproc ::json::write::AlignLeft {fieldlen str} {\n    return [format %-${fieldlen}s $str]\n    #return $str[::string repeat { } [expr {$fieldlen - [::string length $str]}]]\n}\n\n# ### ### ### ######### ######### #########\n\nnamespace eval ::json::write {\n    # Configuration of the layout to write.\n\n    # indented = boolean. objects are indented.\n    # aligned  = boolean. object keys are aligned vertically.\n\n    # aligned  => indented.\n\n    # Combinations of the format specific entries\n    # I A |\n    # - - + ---------------------\n    # 0 0 | Ultracompact (no whitespace, single line)\n    # 1 0 | Indented\n    # 0 1 | Not possible, per the implications above.\n    # 1 1 | Indented + vertically aligned keys\n    # - - + ---------------------\n\n    variable indented 1\n    variable aligned  1\n\n    variable quotes \\\n\t[list \"\\\"\" \"\\\\\\\"\" \\\\ \\\\\\\\ \\b \\\\b \\f \\\\f \\n \\\\n \\r \\\\r \\t \\\\t \\\n\t     \\x00 \\\\u0000 \\x01 \\\\u0001 \\x02 \\\\u0002 \\x03 \\\\u0003 \\\n\t     \\x04 \\\\u0004 \\x05 \\\\u0005 \\x06 \\\\u0006 \\x07 \\\\u0007 \\\n\t     \\x0b \\\\u000b \\x0e \\\\u000e \\x0f \\\\u000f \\x10 \\\\u0010 \\\n\t     \\x11 \\\\u0011 \\x12 \\\\u0012 \\x13 \\\\u0013 \\x14 \\\\u0014 \\\n\t     \\x15 \\\\u0015 \\x16 \\\\u0016 \\x17 \\\\u0017 \\x18 \\\\u0018 \\\n\t     \\x19 \\\\u0019 \\x1a \\\\u001a \\x1b \\\\u001b \\x1c \\\\u001c \\\n\t     \\x1d \\\\u001d \\x1e \\\\u001e \\x1f \\\\u001f \\x7f \\\\u007f \\\n\t     \\x80 \\\\u0080 \\x81 \\\\u0081 \\x82 \\\\u0082 \\x83 \\\\u0083 \\\n\t     \\x84 \\\\u0084 \\x85 \\\\u0085 \\x86 \\\\u0086 \\x87 \\\\u0087 \\\n\t     \\x88 \\\\u0088 \\x89 \\\\u0089 \\x8a \\\\u008a \\x8b \\\\u008b \\\n\t     \\x8c \\\\u008c \\x8d \\\\u008d \\x8e \\\\u008e \\x8f \\\\u008f \\\n\t     \\x90 \\\\u0090 \\x91 \\\\u0091 \\x92 \\\\u0092 \\x93 \\\\u0093 \\\n\t     \\x94 \\\\u0094 \\x95 \\\\u0095 \\x96 \\\\u0096 \\x97 \\\\u0097 \\\n\t     \\x98 \\\\u0098 \\x99 \\\\u0099 \\x9a \\\\u009a \\x9b \\\\u009b \\\n\t     \\x9c \\\\u009c \\x9d \\\\u009d \\x9e \\\\u009e \\x9f \\\\u009f ]\n}\n\n# ### ### ### ######### ######### #########\n## Ready\n\npackage provide json::write 1.0.3\nreturn\n"
  },
  {
    "path": "share/tcl/AnnotSV/tcllib/json/jsonc.tcl",
    "content": "# jsonc.tcl --\n#\n#       Implementation of a JSON parser in C.\n#\tBinding to a yacc/bison parser by Mikhail.\n#\n# Copyright (c) 2013,2015 - critcl wrapper - Andreas Kupries <andreas_kupries@users.sourceforge.net>\n# Copyright (c) 2013      - C binding      - mi+tcl.tk-2013@aldan.algebra.com\n\npackage require critcl\n# @sak notprovided jsonc\npackage provide jsonc 1.1.2\npackage require Tcl 8.4\n\n#critcl::cheaders -g\n#critcl::debug memory symbols\ncritcl::cheaders -Ic c/*.h\ncritcl::csources c/*.c\n\n# # ## ### Import base declarations, forwards ### ## # #\n\ncritcl::ccode {\n    #include <json_y.h>\n}\n\n# # ## ### Main Conversion ### ## # #\n\nnamespace eval ::json {\n    critcl::ccommand json2dict_critcl {dummy I objc objv} {\n\tstruct context context = { NULL };\n\n\tif (objc != 2) {\n\t    Tcl_WrongNumArgs(I, 1, objv, \"json\");\n\t    return TCL_ERROR;\n\t}\n\n\tcontext.text   = Tcl_GetStringFromObj(objv[1], &context.remaining);\n\tcontext.I      = I;\n\tcontext.has_error = 0;\n\tcontext.result = TCL_ERROR;\n\n\tjsonparse (&context);\n\treturn context.result;\n    }\n\n    # Issue with critcl 2 used here. Cannot use '-', incomplete distinction of C and Tcl names.\n    # The json.tcl file making use of this code has a wrapper fixing the issue.\n    critcl::ccommand many_json2dict_critcl {dummy I objc objv} {\n\tstruct context context = { NULL };\n\n\tint                      max;\n\tint                      found;\n\n\tTcl_Obj* result = Tcl_NewListObj (0, NULL);\n\n\tif ((objc < 2) || (objc > 3)) {\n\t    Tcl_WrongNumArgs(I, 1, objv, \"jsonText ?max?\");\n\t    return TCL_ERROR;\n\t}\n\n\tif (objc == 3) {\n\t    if (Tcl_GetIntFromObj(I, objv[2], &max) != TCL_OK) {\n\t\treturn TCL_ERROR;\n\t    }\n\t    if (max <= 0) {\n\t\tTcl_AppendResult (I, \"Bad limit \",\n\t\t\t\t  Tcl_GetString (objv[2]),\n\t\t\t\t  \" of json entities to extract.\",\n\t\t\t\t  NULL);\n\t\tTcl_SetErrorCode (I, \"JSON\", \"BAD-LIMIT\", NULL);\n\t\treturn TCL_ERROR;\n\t    }\n\n\t} else {\n\t    max = -1;\n\t}\n\n\tcontext.text   = Tcl_GetStringFromObj(objv[1], &context.remaining);\n\tcontext.I      = I;\n\tcontext.has_error = 0;\n\tfound  = 0;\n\n\t/* Iterate over the input until\n\t * - we have gotten all requested values.\n\t * - we have run out of input\n\t * - we have run into an error\n\t */\n\n\twhile ((max < 0) || max) {\n\t    context.result = TCL_ERROR;\n\t    jsonparse (&context);\n\n\t    /* parse error, abort */\n\t    if (context.result != TCL_OK) {\n\t\tTcl_DecrRefCount (result);\n\t\treturn TCL_ERROR;\n\t    }\n\n\t    /* Proper value extracted, extend result */\n\t    found ++;\n\t    Tcl_ListObjAppendElement(I, result,\n\t\t\t\t     Tcl_GetObjResult (I));\n\n\t    /* Count down on the number of still missing\n\t     * values, if not asking for all (-1)\n\t     */\n\t    if (max > 0) max --;\n\n\t    /* Jump over trailing whitespace for proper end-detection */\n\t    jsonskip (&context);\n\n\t    /* Abort if we have consumed all input */\n\t    if (!context.remaining) break;\n\n\t    /* Clear scratch pad before continuing */\n\t    context.obj = NULL;\n\t}\n\n\t/* While all parses were ok we reached end of\n\t * input without getting all requested values,\n\t * this is an error\n\t */\n\tif (max > 0) {\n\t    char buf [30];\n\t    sprintf (buf, \"%d\", found);\n            Tcl_ResetResult (I);\n\t    Tcl_AppendResult (I, \"Bad limit \",\n\t\t\t      Tcl_GetString (objv[2]),\n\t\t\t      \" of json entities to extract, found only \",\n\t\t\t      buf,\n\t\t\t      \".\",\n\t\t\t      NULL);\n\t    Tcl_SetErrorCode (I, \"JSON\", \"BAD-LIMIT\", \"TOO\", \"LARGE\", NULL);\n\t    Tcl_DecrRefCount (result);\n\t    return TCL_ERROR;\n\t}\n\n\t/* We are good and done */\n\tTcl_SetObjResult(I, result);\n\treturn TCL_OK;\n    }\n\n    if 0 {critcl::ccommand validate_critcl {dummy I objc objv} {\n\tstruct context context = { NULL };\n\n\tif (objc != 2) {\n\t    Tcl_WrongNumArgs(I, 1, objv, \"jsonText\");\n\t    return TCL_ERROR;\n\t}\n\n\tcontext.text   = Tcl_GetStringFromObj(objv[1], &context.remaining);\n\tcontext.I      = I;\n\tcontext.result = TCL_ERROR;\n\n\t/* Iterate over the input until we have run\n\t * out of text, or encountered an error. We\n\t * use only the lexer here, and told it to not\n\t* create superfluous token values.\n\t */\n\n\twhile (context.remaining) {\n\t    if (jsonlex (&context) == -1) {\n\t\tTcl_SetObjResult(I, Tcl_NewBooleanObj (0));\n\t\treturn TCL_OK;\n\t    }\n\t}\n\n\t/* We are good and done */\n\tTcl_SetObjResult(I, Tcl_NewBooleanObj (1));\n\treturn TCL_OK;\n    }}\n}\n"
  },
  {
    "path": "share/tcl/AnnotSV/tcllib/json/pkgIndex.tcl",
    "content": "# Tcl package index file, version 1.1\n\nif {![package vsatisfies [package provide Tcl] 8.4]} {return}\npackage ifneeded json 1.3.3 [list source [file join $dir json.tcl]]\n\nif {![package vsatisfies [package provide Tcl] 8.5]} {return}\npackage ifneeded json::write 1.0.3 [list source [file join $dir json_write.tcl]]\n"
  },
  {
    "path": "share/tcl/AnnotSV/tcllib/tar/pkgIndex.tcl",
    "content": "if {![package vsatisfies [package provide Tcl] 8.4]} {\n    # PRAGMA: returnok\n    return\n}\npackage ifneeded tar 0.10 [list source [file join $dir tar.tcl]]\n"
  },
  {
    "path": "share/tcl/AnnotSV/tcllib/tar/tar.tcl",
    "content": "# tar.tcl --\n#\n#       Creating, extracting, and listing posix tar archives\n#\n# Copyright (c) 2004    Aaron Faupell <afaupell@users.sourceforge.net>\n# Copyright (c) 2013    Andreas Kupries <andreas_kupries@users.sourceforge.net>\n#                       (GNU tar @LongLink support).\n#\n# See the file \"license.terms\" for information on usage and redistribution\n# of this file, and for a DISCLAIMER OF ALL WARRANTIES.\n# \n# RCS: @(#) $Id: tar.tcl,v 1.17 2012/09/11 17:22:24 andreas_kupries Exp $\n\npackage require Tcl 8.4\npackage provide tar 0.10\n\nnamespace eval ::tar {}\n\nproc ::tar::parseOpts {acc opts} {\n    array set flags $acc\n    foreach {x y} $acc {upvar $x $x}\n    \n    set len [llength $opts]\n    set i 0\n    while {$i < $len} {\n        set name [string trimleft [lindex $opts $i] -]\n        if {![info exists flags($name)]} {return -code error \"unknown option \\\"$name\\\"\"}\n        if {$flags($name) == 1} {\n            set $name [lindex $opts [expr {$i + 1}]]\n            incr i $flags($name)\n        } elseif {$flags($name) > 1} {\n            set $name [lrange $opts [expr {$i + 1}] [expr {$i + $flags($name)}]]\n            incr i $flags($name)\n        } else {\n            set $name 1\n        }\n        incr i\n    }\n}\n\nproc ::tar::pad {size} {\n    set pad [expr {512 - ($size % 512)}]\n    if {$pad == 512} {return 0}\n    return $pad\n}\n\nproc ::tar::seekorskip {ch off wh} {\n    if {[tell $ch] < 0} {\n\tif {$wh!=\"current\"} {\n\t    error \"WHENCE=$wh not supported on non-seekable channel $ch\"\n\t}\n\tskip $ch $off\n\treturn\n    }\n    seek $ch $off $wh\n    return\n}\n\nproc ::tar::skip {ch skipover} {\n    while {$skipover > 0} {\n\tset requested $skipover\n\n\t# Limit individual skips to 64K, as a compromise between speed\n\t# of skipping (Number of read requests), and memory usage\n\t# (Note how skipped block is read into memory!). While the\n\t# read data is immediately discarded it still generates memory\n\t# allocation traffic, gets copied, etc. Trying to skip the\n\t# block in one go without the limit may cause us to run out of\n\t# (virtual) memory, or just induce swapping, for nothing.\n\n\tif {$requested > 65536} {\n\t    set requested 65536\n\t}\n\n\tset skipped [string length [read $ch $requested]]\n\n\t# Stop in short read into the end of the file.\n\tif {!$skipped && [eof $ch]} break\n\n\t# Keep track of how much is (not) skipped yet.\n\tincr skipover -$skipped\n    }\n    return\n}\n\nproc ::tar::readHeader {data} {\n    binary scan $data a100a8a8a8a12a12a8a1a100a6a2a32a32a8a8a155 \\\n                      name mode uid gid size mtime cksum type \\\n                      linkname magic version uname gname devmajor devminor prefix\n\n    foreach x {name type linkname} {\n        set $x [string trim [set $x] \"\\x00\"]\n    }\n    foreach x {uid gid size mtime cksum} {\n        set $x [format %d 0[string trim [set $x] \" \\x00\"]]\n    }\n    set mode [string trim $mode \" \\x00\"]\n\n    if {$magic == \"ustar \"} {\n        # gnu tar\n        # not fully supported\n        foreach x {uname gname prefix} {\n            set $x [string trim [set $x] \"\\x00\"]\n        }\n        foreach x {devmajor devminor} {\n            set $x [format %d 0[string trim [set $x] \" \\x00\"]]\n        }\n    } elseif {$magic == \"ustar\\x00\"} {\n        # posix tar\n        foreach x {uname gname prefix} {\n            set $x [string trim [set $x] \"\\x00\"]\n        }\n        foreach x {devmajor devminor} {\n            set $x [format %d 0[string trim [set $x] \" \\x00\"]]\n        }\n    } else {\n        # old style tar\n        foreach x {uname gname devmajor devminor prefix} { set $x {} }\n        if {$type == \"\"} {\n            if {[string match */ $name]} {\n                set type 5\n            } else {\n                set type 0\n            }\n        }\n    }\n\n    return [list name $name mode $mode uid $uid gid $gid size $size mtime $mtime \\\n                 cksum $cksum type $type linkname $linkname magic $magic \\\n                 version $version uname $uname gname $gname devmajor $devmajor \\\n                 devminor $devminor prefix $prefix]\n}\n\nproc ::tar::contents {file args} {\n    set chan 0\n    parseOpts {chan 0} $args\n    if {$chan} {\n\tset fh $file\n    } else {\n\tset fh [::open $file]\n\tfconfigure $fh -encoding binary -translation lf -eofchar {}\n    }\n    set ret {}\n    while {![eof $fh]} {\n        array set header [readHeader [read $fh 512]]\n\tHandleLongLink $fh header\n        if {$header(name) == \"\"} break\n\tif {$header(prefix) != \"\"} {append header(prefix) /}\n        lappend ret $header(prefix)$header(name)\n        seekorskip $fh [expr {$header(size) + [pad $header(size)]}] current\n    }\n    if {!$chan} {\n\tclose $fh\n    }\n    return $ret\n}\n\nproc ::tar::stat {tar {file {}} args} {\n    set chan 0\n    parseOpts {chan 0} $args\n    if {$chan} {\n\tset fh $tar\n    } else {\n\tset fh [::open $tar]\n\tfconfigure $fh -encoding binary -translation lf -eofchar {}\n    }\n    set ret {}\n    while {![eof $fh]} {\n        array set header [readHeader [read $fh 512]]\n\tHandleLongLink $fh header\n        if {$header(name) == \"\"} break\n\tif {$header(prefix) != \"\"} {append header(prefix) /}\n        seekorskip $fh [expr {$header(size) + [pad $header(size)]}] current\n        if {$file != \"\" && \"$header(prefix)$header(name)\" != $file} {continue}\n        set header(type) [string map {0 file 5 directory 3 characterSpecial 4 blockSpecial 6 fifo 2 link} $header(type)]\n        set header(mode) [string range $header(mode) 2 end]\n        lappend ret $header(prefix)$header(name) [list mode $header(mode) uid $header(uid) gid $header(gid) \\\n                    size $header(size) mtime $header(mtime) type $header(type) linkname $header(linkname) \\\n                    uname $header(uname) gname $header(gname) devmajor $header(devmajor) devminor $header(devminor)]\n    }\n    if {!$chan} {\n\tclose $fh\n    }\n    return $ret\n}\n\nproc ::tar::get {tar file args} {\n    set chan 0\n    parseOpts {chan 0} $args\n    if {$chan} {\n\tset fh $tar\n    } else {\n\tset fh [::open $tar]\n\tfconfigure $fh -encoding binary -translation lf -eofchar {}\n    }\n    while {![eof $fh]} {\n\tset data [read $fh 512]\n        array set header [readHeader $data]\n\tHandleLongLink $fh header\n        if {$header(name) == \"\"} break\n\tif {$header(prefix) != \"\"} {append header(prefix) /}\n        set name [string trimleft $header(prefix)$header(name) /]\n        if {$name == $file} {\n            set file [read $fh $header(size)]\n            if {!$chan} {\n\t\tclose $fh\n\t    }\n            return $file\n        }\n        seekorskip $fh [expr {$header(size) + [pad $header(size)]}] current\n    }\n    if {!$chan} {\n\tclose $fh\n    }\n    return {}\n}\n\nproc ::tar::untar {tar args} {\n    set nooverwrite 0\n    set data 0\n    set nomtime 0\n    set noperms 0\n    set chan 0\n    parseOpts {dir 1 file 1 glob 1 nooverwrite 0 nomtime 0 noperms 0 chan 0} $args\n    if {![info exists dir]} {set dir [pwd]}\n    set pattern *\n    if {[info exists file]} {\n        set pattern [string map {* \\\\* ? \\\\? \\\\ \\\\\\\\ \\[ \\\\\\[ \\] \\\\\\]} $file]\n    } elseif {[info exists glob]} {\n        set pattern $glob\n    }\n\n    set ret {}\n    if {$chan} {\n\tset fh $tar\n    } else {\n\tset fh [::open $tar]\n\tfconfigure $fh -encoding binary -translation lf -eofchar {}\n    }\n    while {![eof $fh]} {\n        array set header [readHeader [read $fh 512]]\n\tHandleLongLink $fh header\n        if {$header(name) == \"\"} break\n\tif {$header(prefix) != \"\"} {append header(prefix) /}\n        set name [string trimleft $header(prefix)$header(name) /]\n        if {![string match $pattern $name] || ($nooverwrite && [file exists $name])} {\n            seekorskip $fh [expr {$header(size) + [pad $header(size)]}] current\n            continue\n        }\n\n        set name [file join $dir $name]\n        if {![file isdirectory [file dirname $name]]} {\n            file mkdir [file dirname $name]\n            lappend ret [file dirname $name] {}\n        }\n        if {[string match {[0346]} $header(type)]} {\n            if {[catch {::open $name w+} new]} {\n                # sometimes if we dont have write permission we can still delete\n                catch {file delete -force $name}\n                set new [::open $name w+]\n            }\n            fconfigure $new -encoding binary -translation lf -eofchar {}\n            fcopy $fh $new -size $header(size)\n            close $new\n            lappend ret $name $header(size)\n        } elseif {$header(type) == 5} {\n            file mkdir $name\n            lappend ret $name {}\n        } elseif {[string match {[12]} $header(type)] && $::tcl_platform(platform) == \"unix\"} {\n            catch {file delete $name}\n            if {![catch {file link [string map {1 -hard 2 -symbolic} $header(type)] $name $header(linkname)}]} {\n                lappend ret $name {}\n            }\n        }\n        seekorskip $fh [pad $header(size)] current\n        if {![file exists $name]} continue\n\n        if {$::tcl_platform(platform) == \"unix\"} {\n            if {!$noperms} {\n                catch {file attributes $name -permissions 0[string range $header(mode) 2 end]}\n            }\n            catch {file attributes $name -owner $header(uid) -group $header(gid)}\n            catch {file attributes $name -owner $header(uname) -group $header(gname)}\n        }\n        if {!$nomtime} {\n            file mtime $name $header(mtime)\n        }\n    }\n    if {!$chan} {\n\tclose $fh\n    }\n    return $ret\n}\n\n## \n # ::tar::statFile\n # \n # Returns stat info about a filesystem object, in the form of an info \n # dictionary like that returned by ::tar::readHeader.\n # \n # The mode, uid, gid, mtime, and type entries are always present. \n # The size and linkname entries are present if relevant for this type \n # of object. The uname and gname entries are present if the OS supports \n # them. No devmajor or devminor entry is present.\n ##\n\nproc ::tar::statFile {name followlinks} {\n    if {$followlinks} {\n        file stat $name stat\n    } else {\n        file lstat $name stat\n    }\n    \n    set ret {}\n    \n    if {$::tcl_platform(platform) == \"unix\"} {\n        lappend ret mode 1[file attributes $name -permissions]\n        lappend ret uname [file attributes $name -owner]\n        lappend ret gname [file attributes $name -group]\n        if {$stat(type) == \"link\"} {\n            lappend ret linkname [file link $name]\n        }\n    } else {\n        lappend ret mode [lindex {100644 100755} [expr {$stat(type) == \"directory\"}]]\n    }\n    \n    lappend ret  uid $stat(uid)  gid $stat(gid)  mtime $stat(mtime) \\\n      type $stat(type)\n    \n    if {$stat(type) == \"file\"} {lappend ret size $stat(size)}\n    \n    return $ret\n}\n\n## \n # ::tar::formatHeader\n # \n # Opposite operation to ::tar::readHeader; takes a file name and info \n # dictionary as arguments, returns a corresponding (POSIX-tar) header.\n # \n # The following dictionary entries must be present:\n #   mode\n #   type\n # \n # The following dictionary entries are used if present, otherwise \n # the indicated default is used:\n #   uid       0\n #   gid       0\n #   size      0\n #   mtime     [clock seconds]\n #   linkname  {}\n #   uname     {}\n #   gname     {}\n #   \n # All other dictionary entries, including devmajor and devminor, are \n # presently ignored.\n ##\n\nproc ::tar::formatHeader {name info} {\n    array set A {\n        linkname \"\"\n        uname \"\"\n        gname \"\"\n        size 0\n        gid  0\n        uid  0\n    }\n    set A(mtime) [clock seconds]\n    array set A $info\n    array set A {devmajor \"\" devminor \"\"}\n\n    set type [string map {file 0 directory 5 characterSpecial 3 \\\n      blockSpecial 4 fifo 6 link 2 socket A} $A(type)]\n    \n    set osize  [format %o $A(size)]\n    set ogid   [format %o $A(gid)]\n    set ouid   [format %o $A(uid)]\n    set omtime [format %o $A(mtime)]\n    \n    set name [string trimleft $name /]\n    if {[string length $name] > 255} {\n        return -code error \"path name over 255 chars\"\n    } elseif {[string length $name] > 100} {\n\tset common [string range $name end-99 154]\n\tif {[set splitpoint [string first / $common]] == -1} {\n\t    return -code error \"path name cannot be split into prefix and name\"\n\t}\n\tset prefix [string range $name 0 end-100][string range $common 0 $splitpoint-1]\n\tset name   [string range $common $splitpoint+1 end][string range $name 155 end]\n    } else {\n        set prefix \"\"\n    }\n\n    set header [binary format a100A8A8A8A12A12A8a1a100A6a2a32a32a8a8a155a12 \\\n                              $name $A(mode)\\x00 $ouid\\x00 $ogid\\x00\\\n                              $osize\\x00 $omtime\\x00 {} $type \\\n                              $A(linkname) ustar\\x00 00 $A(uname) $A(gname)\\\n                              $A(devmajor) $A(devminor) $prefix {}]\n\n    binary scan $header c* tmp\n    set cksum 0\n    foreach x $tmp {incr cksum $x}\n\n    return [string replace $header 148 155 [binary format A8 [format %o $cksum]\\x00]]\n}\n\n\nproc ::tar::recurseDirs {files followlinks} {\n    foreach x $files {\n        if {[file isdirectory $x] && ([file type $x] != \"link\" || $followlinks)} {\n            if {[set more [glob -dir $x -nocomplain *]] != \"\"} {\n                eval lappend files [recurseDirs $more $followlinks]\n            } else {\n                lappend files $x\n            }\n        }\n    }\n    return $files\n}\n\nproc ::tar::writefile {in out followlinks name} {\n     puts -nonewline $out [formatHeader $name [statFile $in $followlinks]]\n     set size 0\n     if {[file type $in] == \"file\" || ($followlinks && [file type $in] == \"link\")} {\n         set in [::open $in]\n         fconfigure $in -encoding binary -translation lf -eofchar {}\n         set size [fcopy $in $out]\n         close $in\n     }\n     puts -nonewline $out [string repeat \\x00 [pad $size]]\n}\n\nproc ::tar::create {tar files args} {\n    set dereference 0\n    set chan 0\n    parseOpts {dereference 0 chan 0} $args\n\n    if {$chan} {\n\tset fh $tar\n    } else {\n\tset fh [::open $tar w+]\n\tfconfigure $fh -encoding binary -translation lf -eofchar {}\n    }\n    foreach x [recurseDirs $files $dereference] {\n        writefile $x $fh $dereference $x\n    }\n    puts -nonewline $fh [string repeat \\x00 1024]\n\n    if {!$chan} {\n\tclose $fh\n    }\n    return $tar\n}\n\nproc ::tar::add {tar files args} {\n    set dereference 0\n    set prefix \"\"\n    set quick 0\n    parseOpts {dereference 0 prefix 1 quick 0} $args\n    \n    set fh [::open $tar r+]\n    fconfigure $fh -encoding binary -translation lf -eofchar {}\n    \n    if {$quick} then {\n        seek $fh -1024 end\n    } else {\n        set data [read $fh 512]\n        while {[regexp {[^\\0]} $data]} {\n            array set header [readHeader $data]\n            seek $fh [expr {$header(size) + [pad $header(size)]}] current\n            set data [read $fh 512]\n        }\n        seek $fh -512 current\n    }\n\n    foreach x [recurseDirs $files $dereference] {\n        writefile $x $fh $dereference $prefix$x\n    }\n    puts -nonewline $fh [string repeat \\x00 1024]\n\n    close $fh\n    return $tar\n}\n\nproc ::tar::remove {tar files} {\n    set n 0\n    while {[file exists $tar$n.tmp]} {incr n}\n    set tfh [::open $tar$n.tmp w]\n    set fh [::open $tar r]\n\n    fconfigure $fh  -encoding binary -translation lf -eofchar {}\n    fconfigure $tfh -encoding binary -translation lf -eofchar {}\n\n    while {![eof $fh]} {\n        array set header [readHeader [read $fh 512]]\n        if {$header(name) == \"\"} {\n            puts -nonewline $tfh [string repeat \\x00 1024]\n            break\n        }\n\tif {$header(prefix) != \"\"} {append header(prefix) /}\n        set name $header(prefix)$header(name)\n        set len [expr {$header(size) + [pad $header(size)]}]\n        if {[lsearch $files $name] > -1} {\n            seek $fh $len current\n        } else {\n            seek $fh -512 current\n            fcopy $fh $tfh -size [expr {$len + 512}]\n        }\n    }\n\n    close $fh\n    close $tfh\n\n    file rename -force $tar$n.tmp $tar\n}\n\nproc ::tar::HandleLongLink {fh hv} {\n    upvar 1 $hv header thelongname thelongname\n\n    # @LongName Part I.\n    if {$header(type) == \"L\"} {\n\t# Size == Length of name. Read it, and pad to full 512\n\t# size.  After that is a regular header for the actual\n\t# file, where we have to insert the name. This is handled\n\t# by the next iteration and the part II below.\n\tset thelongname [string trimright [read $fh $header(size)] \\000]\n\tseekorskip $fh [pad $header(size)] current\n\treturn -code continue\n    }\n    # Not supported yet: type 'K' for LongLink (long symbolic links).\n\n    # @LongName, part II, get data from previous entry, if defined.\n    if {[info exists thelongname]} {\n\tset header(name) $thelongname\n\t# Prevent leakage to further entries.\n\tunset thelongname\n    }\n\n    return\n}\n"
  },
  {
    "path": "tests/AnnotSV/README",
    "content": "# Bash environment\n##################\n\n# The \"set -e\" option instructs bash to immediately exit if any command has a non-zero exit status.\nset -eo pipefail\n\n\n\n# Checks only for 1 test directory \n##################################\n\n=> Need to be run in each directory:\n./command_Tcl.sh >& command_Tcl.log\n\ngr error command_Tcl.log\n\ngr \"ok - Finished\" command_Tcl.log\ntail -2 command_Tcl.log\n\n\n\n\n## Automation of all tests (to check)\n##################################### \n\n./scripts/check_all_public_test_directory.sh >& ./check_all_public_test_directory.log &\n\n\n\n\n## There should no longer be a path in the VCF inputs \n#####################################################\n\ngrep [^\\\\.0-9+-]/[^\\\\.0-9+-]  test_*/input/*vcf\n\n\n"
  },
  {
    "path": "tests/AnnotSV/scripts/check_all_public_test_directory.sh",
    "content": "#!/bin/bash\n\n# Timing: test_01  --> test_34 \n#         13:18:21     14:30:55\n# ~1h15\n\nfor f in test_*/command_Tcl.sh\ndo\n        d=`dirname $f`\n        cd $d\n        echo \"######## $d \"\n\techo \"###############################################################################\"\n        date\n        ./command_Tcl.sh &> command_Tcl.log\n        grep -i error command_Tcl.log\n        grep \"ok - Finished\" command_Tcl.log\n        tail -2 command_Tcl.log\n        echo \"\"\n        cd ..\ndone\n\n\necho \"ok - Finished all checkings\"\n\n"
  },
  {
    "path": "tests/AnnotSV/scripts/check_end_values.tcl",
    "content": "#!/usr/bin/env tclsh\n\nproc ContentFromFile {{Fichier \"\"}} {\n    if {[string equal $Fichier \"\"]} {return \"\"}\n    set f     [open $Fichier r]\n    set Texte [read -nonewline $f]\n    close $f\n    return $Texte\n}\n\nproc LinesFromFile {{Fichier \"\"}} {\n    return [split [ContentFromFile $Fichier] \"\\n\"]\n}\n\nset fileToCheck [lindex $argv 0]\n\nset test \"Ok\"\nforeach L [LinesFromFile $fileToCheck] {\n    set INFO [lindex $L end]\n    if {![regexp \"END=(\\[^;\\]+)\" $INFO match END]} {set END \"---\"}\n    set svtype [lindex $L 1]\n    set start [lindex $L end-2]\n    set end [lindex $L end-1]\n    if {[regexp $svtype \"TRA BND\"]} {\n        if {$start ne $end} {\n            #puts \"--- TRA/BND: $L\"\n            set test \"TRAorBNDnotOK\"\n        }\n    } else {\n        if {$END ne $end} {\n            puts \"--- $END ne $end : $L\"\n            set test \"SVnotOK\"\n        }\n    }\n}\n\nputs $test\nreturn $test\n\n"
  },
  {
    "path": "tests/AnnotSV/scripts/check_includeCI.tcl",
    "content": "#!/usr/bin/env tclsh\n\nproc ContentFromFile {{Fichier \"\"}} {\n    if {[string equal $Fichier \"\"]} {return \"\"}\n    set f     [open $Fichier r]\n    set Texte [read -nonewline $f]\n    close $f\n    return $Texte\n}\n\nproc LinesFromFile {{Fichier \"\"}} {\n    return [split [ContentFromFile $Fichier] \"\\n\"]\n}\n\nset fileToCheck [lindex $argv 0]\n\nset test \"Ok\"\n\nforeach L [LinesFromFile $fileToCheck] {\n        set INFO [lindex $L end]\n        if {![regexp \"END=(\\[^;\\]+)\" $INFO match END]} {set END \"---\"}\n        set svtype [lindex $L 1]\n        set start [lindex $L end-2]\n        set end [lindex $L end-1]\n        if {![regexp \"CIPOS(\\[^=\\])=(\\[^;\\]+)\" [lindex $L end] match CIPOS]} {set CIPOS \"---\"}\n        if {![regexp \"CIEND(\\[^=\\])=(\\[^;\\]+)\" [lindex $L end] match CIEND]} {set CIEND \"---\"}\n        set cipos [lindex [split $CIPOS \",\"] 0]\n        set ciend [lindex [split $CIEND \",\"] 1]\n        if {$ciend eq \"\"} {continue}\n        if {$svtype ne \"TRA\"} {\n                if {[expr {$END+$ciend}] ne $end} {\n                        puts \"[lrange $L 0 4] -- cipos=$cipos ciend=$ciend END=$END\"\n\t\t\tset test \"notOK\"\n                }\n        } else {\n                # pour les TRA : end = $POS (du VCF) + $ciend + 1\n                if {[expr {$end-$start}] ne [expr {$ciend-$cipos+1}]} {\n                        puts \"--- TRA: [lrange $L 0 4] -- [expr {$end-$start}] ne [expr {$ciend-$cipos+1}]\"\n\t\t\tputs $L\n                \tset test \"notOK\"\n\t\t}\n        }\n}\n\nputs $test\nreturn $test\n\n\n\n"
  },
  {
    "path": "tests/AnnotSV/scripts/complete_KnotAnnotSV_YAML_test.tcl",
    "content": "#!/usr/bin/env tclsh\n\n############################################################################################################\n# AnnotSV web site                                                                                         #\n#                                                                                                          #\n# Auteur: Veronique Geoffroy (veronique.geoffroy@inserm.fr)                                                #\n# Date: 2020/12/16                                                                                         #\n############################################################################################################\n\nproc WriteTextInFile {texte fichier} {\n    set    fifi [open $fichier a]\n    puts  $fifi $texte\n    close $fifi\n    return 1\n}\n\n\n# \"./output/test.41_SV.annotated.tsv\"\nset AnnotSVoutput [lindex $argv 0]\n\n# \"/maison/geoffroy/knotAnnotSV/lgmgeoFork/knotAnnotSV/config_AnnotSV.yaml\"\nset yamlFile [lindex $argv 1]\n\n# \"./output/config_AnnotSV.tmp.yaml\"\nset yamlFileCompleted [lindex $argv 2]\nfile delete -force $yamlFileCompleted\n\n\nset L_linesToWrite {}\n\n# Look at the last POSITION used in the yamlFile\nset lastPos 0\nset f [open $yamlFile]\nwhile {![eof $f]} {\n    set L [gets $f]\n    lappend L_linesToWrite $L\n    if {[regexp \"^ +POSITION: +(\\[0-9\\]+)\" $L match pos]} {\n\tif {$pos > $lastPos} {set lastPos $pos}\n    }\n}\n\n# Look at the user col name to add in \"yamlFileCompleted\"\nset L_userColName {}\nset f [open $AnnotSVoutput]\nwhile {![eof $f]} {\n    set L [gets $f]\n    if {[regexp \"^AnnotSV_ID\" $L]} {\n\tif {![regsub \"^.*SV_type\\t\" $L \"\" L]} {\n\t    regsub \"^.*SV_length\\t\" $L \"\" L\n\t}\n\tregsub \"Annotation_mode.*\" $L \"\" L\n\tregsub \"\\t$\" $L \"\" L\n\tset L_userColName [split $L \"\\t\"]\n\tbreak\n    }\n}\n\n# Complete the yamlFile (creation of yamlFileCompleted)\nforeach col $L_userColName {\n    incr lastPos\n    lappend L_linesToWrite \"${col}: # additional user column\"\n    lappend L_linesToWrite \"    POSITION: $lastPos\"\n    lappend L_linesToWrite \"\"\n}\nWriteTextInFile [join $L_linesToWrite \"\\n\"] $yamlFileCompleted\n\n\n"
  },
  {
    "path": "tests/AnnotSV/scripts/cutWithColumnNames.tcl",
    "content": "#!/usr/bin/env tclsh\n\n## Command line example:\n## /maison/geoffroy/Tcl/cutWithColumnNames.tcl test.annotated.tsv \"SV type;Samples_ID;AnnotSV ranking\"\n\n\nproc ContentFromFile {{Fichier \"\"}} {\n    if {[string equal $Fichier \"\"]} {return \"\"}\n    set f     [open $Fichier r]\n    set Texte [read -nonewline $f]\n    close $f\n    return $Texte\n}\n\nproc LinesFromFile {{Fichier \"\"}} {\n    return [split [ContentFromFile $Fichier] \"\\n\"]\n}\n\n\n#############\n### INPUT ###\n#############\n# Fichier d'output d'AnnotSV :\nset annotatedSVfileToParse [lindex $argv 0]\n# Liste du nom des colonnes à afficher, séparées par des \";\" (ET sans espace !)\nset columnNames [lindex $argv 1]\nset L_colNames [split $columnNames \";\"]\n\n\n# 1 - Cherche les numéros des colonnes à afficher \n# 2 - Affiche les infos dans les colonnes spécifiées en input\n##############################################################\nforeach L [LinesFromFile $annotatedSVfileToParse] {\n\tset Ls [split $L \"\\t\"]\n\tif {[regexp \"^## \" $L]} {continue}\n\n\t# header\n\tif {[regexp \"^AnnotSV_ID|^AnnotSV ID|^#|^gene|^variantID\" $L]} {\n\t\tset lengthHeader [llength $Ls]\n\t\tset L_i {}\n\t\tset L_colOk {}\n\t\tforeach col $L_colNames {\n\t\t\tset i [lsearch $Ls \"$col\"] \n\t\t\tif {$i ne -1} {\t\n\t\t\t\tlappend L_i $i\n\t\t\t\tlappend L_colOk $col\n\t\t\t}\n\t\t}\n\t\tif {$L_colOk eq \"\"} {puts \"No column to display\";exit}\n\t\tputs \"[join $L_colOk \"\\t\"]\"\n\t\tcontinue\n\t}\n\n\t# annotations\n\tif {[llength $Ls] ne $lengthHeader} {\n\t\tputs \"different lengths of lines ([llength $L] ne $lengthHeader)\"\n\t}\n\tforeach i $L_i {\n\t\tputs -nonewline \"[lindex $Ls $i]\\t\"\n\t}\n\tputs \"\"\n\n}\n\n\n"
  },
  {
    "path": "tests/AnnotSV/test_01_configfile/command_Tcl.sh",
    "content": "#!/bin/bash -x\n\nset -eo pipefail\n\n\ncut=\"$ANNOTSV/tests/AnnotSV/scripts/cutWithColumnNames.tcl\"\n\nfunction exists_in_list() {\n    LIST=$1\n    DELIMITER=$2\n    VALUE=$3\n    [[ \"$LIST\" =~ ($DELIMITER|^)$VALUE($DELIMITER|$) ]]\n}\n\n\n# - Check that users can select only a subset of the annotation columns provided by AnnotSV by using the $ANNOTSV/etc/AnnotSV/configfile\n#   => decrease the number of output annotation column\n# - Check that no column is shifted by using the configfile\n\n\n\n# Run of AnnotSV, asking for the minimum of annotation columns (Using a \"configfile\" located in the same directory as the input file)\nmkdir -p ./output\ncp $ANNOTSV/etc/AnnotSV/configfile.minAnnotation ./input/configfile\nrm -f \"./output/test_minAnn_tcl.annotated.tsv\"\n$ANNOTSV/bin/AnnotSV -SVinputFile \"./input/test.bed\" -svtBEDcol 5  -SVinputInfo 1 -outputFile \"./output/test_minAnn_tcl.annotated.tsv\" -genomeBuild GRCh37\nrm ./input/configfile\n\nminAnn=`head -1 ./output/test_minAnn_tcl.annotated.tsv | wc -w`\nnLinesForMinAnn=`wc -l ./output/test_minAnn_tcl.annotated.tsv | awk '{print $1}'`\n\n\n# Run of AnnotSV, with all annotation columns asked\nrm -f \"./output/test_allAnn_tcl.annotated.tsv\"\n$ANNOTSV/bin/AnnotSV -SVinputFile \"./input/test.bed\" -svtBEDcol 5  -SVinputInfo 1 -outputFile \"./output/test_allAnn_tcl.annotated.tsv\" -genomeBuild GRCh37\n\nallAnn=`head -1 \"./output/test_allAnn_tcl.annotated.tsv\" | wc -w`\nnLinesForAllAnn=`wc -l \"./output/test_allAnn_tcl.annotated.tsv\" | awk '{print $1}'`\n\n\nif [ $nLinesForMinAnn != $nLinesForAllAnn ] \nthen\n\techo \"error 1: not the same number of lines in both .tsv files\"\n\texit 1\nfi\n\nif [[ $minAnn > 74 ]]\nthen\n        echo \"error 1: too much annotation columns ($minAnn)\"\n        exit 1\nfi\n\nif [ $minAnn -ge $allAnn ]\nthen\n        echo \"error 1: minimum of annotation columns not respected\"\n        exit 1\nfi\n\n\n\n# Check that no column is shifted\nfor v in `$cut \"./output/test_minAnn_tcl.annotated.tsv\" \"ACMG_class\" | sort -u`\ndo\n        if ! exists_in_list \"1 2 3 4 5 ACMG_class full=1 full=2 full=3 full=4 full=5 full=NA NA\" \" \" \"$v\"\n        then\n                echo \"error1: some columns semms to be shifted\"\n                exit 1\n        fi\ndone\n\n\necho \"ok - Finished\"\n\n\n"
  },
  {
    "path": "tests/AnnotSV/test_01_configfile/input/test.bed",
    "content": "#chrom\tstart\tend\ttutu\tSV type\n1\t2902537\t3529849\tii\tDEL\n"
  },
  {
    "path": "tests/AnnotSV/test_02_HG00096/command_Tcl.sh",
    "content": "#!/bin/bash -x\n\nset -eo pipefail\n\n\ncut=\"$ANNOTSV/tests/AnnotSV/scripts/cutWithColumnNames.tcl\"\n\nfunction exists_in_list() {\n    LIST=$1\n    DELIMITER=$2\n    VALUE=$3\n    [[ \"$LIST\" =~ ($DELIMITER|^)$VALUE($DELIMITER|$) ]]\n}\n\n##################################################################################################\n#####################      HG00096 (1000g)      ##################################################\n##################################################################################################\n\n\n# -SVinputFile:\n###############\n#         HG00096.wgs.mergedSV.v8.20130502.svs.genotypes.bed\n#         HG00096.wgs.mergedSV.v8.20130502.svs.genotypes.vcf\n#         => 4752 SV\n\n\n# Check that no column is shifted\n#################################\n# The \"ACMG_class\" column must only contain:\n# 1\n# 3\n# 4\n# 5\n# ACMG_class\n# full=1\n# full=3\n# full=4\n# full=5\n# full=NA\n# NA\n\nSVinputBEDfile=\"./input/HG00096.wgs.mergedSV.v8.20130502.svs.genotypes.bed\"\nSVinputVCFfile=\"./input/HG00096.wgs.mergedSV.v8.20130502.svs.genotypes.vcf\"\n\n\n\nmkdir -p ./output\nrm -f ./output/HG00096_tcl_*annotated.tsv\n\n\n# SVinputFile = BED\n$ANNOTSV/bin/AnnotSV -SVinputFile $SVinputBEDfile -svtBEDcol 4 -SVinputInfo 1 -outputFile \"./output/HG00096_tcl_1.annotated.tsv\" -genomeBuild GRCh37 \nfor v in `$cut \"./output/HG00096_tcl_1.annotated.tsv\" \"ACMG_class\" | sort -u`\ndo\n\tif ! exists_in_list \"1 2 3 4 5 ACMG_class full=1 full=2 full=3 full=4 full=5 full=NA NA\" \" \" \"$v\"\n\tthen\n    \t\techo \"Error with SVinputFile = BED\"\n        \techo \"error 1\"\n        \texit 1\n\tfi\ndone\n\n# SVinputFile = VCF\n$ANNOTSV/bin/AnnotSV -SVinputFile $SVinputVCFfile -SVinputInfo 1 -outputFile \"./output/HG00096_tcl_2.annotated.tsv\" -genomeBuild GRCh37\nfor v in `$cut \"./output/HG00096_tcl_2.annotated.tsv\" \"ACMG_class\" | sort -u`\ndo\n        if ! exists_in_list \"1 2 3 4 5 ACMG_class full=1 full=2 full=3 full=4 full=5 full=NA NA\" \" \" \"$v\"\n        then\n                echo \"Error with SVinputFile = VCF\"\n                echo \"error 1\"\n                exit 1\n        fi\ndone\n\n# SVinputFile = zipped VCF\ngzip $SVinputVCFfile\n$ANNOTSV/bin/AnnotSV -SVinputFile $SVinputVCFfile.gz -SVinputInfo 1 -outputFile \"./output/HG00096_tcl_3.annotated.tsv\" -genomeBuild GRCh37 \nfor v in `$cut \"./output/HG00096_tcl_3.annotated.tsv\" \"ACMG_class\" | sort -u`\ndo\n        if ! exists_in_list \"1 2 3 4 5 ACMG_class full=1 full=2 full=3 full=4 full=5 full=NA NA\" \" \" \"$v\"\n        then\n                echo \"Error with SVinputFile = zipped VCF\"\n                echo \"error 1\"\n                exit 1\n        fi\ndone\ngunzip $SVinputVCFfile.gz\n \n# -SVinputInfo 0\n$ANNOTSV/bin/AnnotSV -SVinputFile $SVinputBEDfile -svtBEDcol 4 -SVinputInfo 0 -outputFile \"./output/HG00096_tcl_4.annotated.tsv\" -genomeBuild GRCh37\nfor v in `$cut \"./output/HG00096_tcl_4.annotated.tsv\" \"ACMG_class\" | sort -u`\ndo\n        if ! exists_in_list \"1 2 3 4 5 ACMG_class full=1 full=2 full=3 full=4 full=5 full=NA NA\" \" \" \"$v\"\n        then\n                echo \"Error with -SVinputInfo 0\"\n                echo \"error 1\"\n                exit 1\n        fi\ndone\n\n# -metrics fr\n$ANNOTSV/bin/AnnotSV -SVinputFile $SVinputBEDfile -svtBEDcol 4 -outputFile \"./output/HG00096_tcl_5.annotated.tsv\" -metrics fr -genomeBuild GRCh37 \nfor v in `$cut \"./output/HG00096_tcl_5.annotated.tsv\" \"ACMG_class\" | sort -u`\ndo\n        if ! exists_in_list \"1 2 3 4 5 ACMG_class full=1 full=2 full=3 full=4 full=5 full=NA NA\" \" \" \"$v\"\n        then\n                echo \"Error with -metrics fr\"\n                echo \"error 1\"\n                exit 1\n        fi\ndone\n\n \n# -reciprocal 1\n$ANNOTSV/bin/AnnotSV -SVinputFile $SVinputBEDfile -svtBEDcol 4 -SVinputInfo 1 -reciprocal 1 -outputFile \"./output/HG00096_tcl_6.annotated.tsv\" -genomeBuild GRCh37\nfor v in `$cut \"./output/HG00096_tcl_6.annotated.tsv\" \"ACMG_class\" | sort -u`\ndo\n        if ! exists_in_list \"1 2 3 4 5 ACMG_class full=1 full=2 full=3 full=4 full=5 full=NA NA\" \" \" \"$v\"\n        then\n                echo \"Error with -reciprocal 1\"\n                echo \"error 1\"\n                exit 1\n        fi\ndone\n\n\n\necho \"ok - Finished\"\n\n\n"
  },
  {
    "path": "tests/AnnotSV/test_02_HG00096/command_python.sh",
    "content": "#!/bin/bash -x\n\nset -eo pipefail\n\n\ncut=\"$ANNOTSV/tests/data/scripts/cutWithColumnNames.tcl\"\nSVinputBEDfile=\"./input/HG00096.wgs.mergedSV.v8.20130502.svs.genotypes.bed\"\nSVinputVCFfile=\"./input/HG00096.wgs.mergedSV.v8.20130502.svs.genotypes.vcf\"\n\nfunction exists_in_list() {\n    LIST=$1\n    DELIMITER=$2\n    VALUE=$3\n    [[ \"$LIST\" =~ ($DELIMITER|^)$VALUE($DELIMITER|$) ]]\n}\n\n\n# SVinputFile = BED\npipenv run annotsv --SVinputFile $SVinputBEDfile --svtBEDcol 4 --SVinputInfo 1 --outputFile ./output/HG00096_python_1.annotated.tsv --genomeBuild GRCh37\nfor v in `$cut ./output/HG00096_python_1.annotated.tsv \"ACMG_class\" | sort -u`\ndo\n        if ! exists_in_list \"1 2 3 4 5 ACMG_class full=1 full=2 full=3 full=4 full=5 full=NA NA\" \" \" \"$v\"\n        then\n                echo \"Error with SVinputFile = BED\"\n                echo \"error 1\"\n                exit 1\n        fi\ndone\n\n# SVinputFile = VCF\npipenv run annotsv --SVinputFile $SVinputVCFfile --SVinputInfo 1 --outputFile ./output/HG00096_python_2.annotated.tsv --genomeBuild GRCh37\nfor v in `$cut ./output/HG00096_python_2.annotated.tsv \"ACMG_class\" | sort -u`\ndo\n        if ! exists_in_list \"1 2 3 4 5 ACMG_class full=1 full=2 full=3 full=4 full=5 full=NA NA\" \" \" \"$v\"\n        then\n                echo \"Error with SVinputFile = VCF\"\n                echo \"error 1\"\n                exit 1\n        fi\ndone\n\n# SVinputFile = zipped VCF\ngzip $SVinputVCFfile\npipenv run annotsv --SVinputFile $SVinputVCFfile.gz --SVinputInfo 1 --outputFile ./output/HG00096_python_3.annotated.tsv --genomeBuild GRCh37\nfor v in `$cut ./output/HG00096_python_3.annotated.tsv \"ACMG_class\" | sort -u`\ndo\n        if ! exists_in_list \"1 2 3 4 5 ACMG_class full=1 full=2 full=3 full=4 full=5 full=NA NA\" \" \" \"$v\"\n        then\n                echo \"Error with SVinputFile = zipped VCF\"\n                echo \"error 1\"\n                exit 1\n        fi\ndone\ngunzip $SVinputVCFfile.gz\n\n# -SVinputInfo 0\npipenv run annotsv --SVinputFile $SVinputBEDfile --svtBEDcol 4 --SVinputInfo 0 --outputFile ./output/HG00096_python_4.annotated.tsv --genomeBuild GRCh37\nfor v in `$cut ./output/HG00096_python_4.annotated.tsv \"ACMG_class\" | sort -u`\ndo\n        if ! exists_in_list \"1 2 3 4 5 ACMG_class full=1 full=2 full=3 full=4 full=5 full=NA NA\" \" \" \"$v\"\n        then\n                echo \"Error with -SVinputInfo 0\"\n                echo \"error 1\"\n                exit 1\n        fi\ndone\n\n# -metrics fr\npipenv run annotsv --SVinputFile $SVinputBEDfile --svtBEDcol 4 --outputFile ./output/HG00096_python_5.annotated.tsv --metrics fr --genomeBuild GRCh37\nfor v in `$cut ./output/HG00096_python_5.annotated.tsv \"ACMG_class\" | sort -u`\ndo\n        if ! exists_in_list \"1 2 3 4 5 ACMG_class full=1 full=2 full=3 full=4 full=5 full=NA NA\" \" \" \"$v\"\n        then\n                echo \"Error with -metrics fr\"\n                echo \"error 1\"\n                exit 1\n        fi\ndone\n\n\n# -reciprocal 1\npipenv run annotsv --SVinputFile $SVinputBEDfile --svtBEDcol 4 --SVinputInfo 1 --reciprocal 1 --outputFile ./output/HG00096_python_6.annotated.tsv --genomeBuild GRCh37\nfor v in `$cut ./output/HG00096_python_6.annotated.tsv \"ACMG_class\" | sort -u`\ndo\n        if ! exists_in_list \"1 2 3 4 5 ACMG_class full=1 full=2 full=3 full=4 full=5 full=NA NA\" \" \" \"$v\"\n        then\n                echo \"Error with -reciprocal 1\"\n                echo \"error 1\"\n                exit 1\n        fi\ndone\n\n\necho \"ok - Finished\"\n\n"
  },
  {
    "path": "tests/AnnotSV/test_02_HG00096/input/HG00096.wgs.mergedSV.v8.20130502.svs.genotypes.bed",
    "content": "chrom\tstart\tend\tsvtype\n1\t3995268\t3995269\tALU;TSD=null\n1\t4204667\t4204717\tDEL\n1\t6434482\t6445321\tDEL\n1\t6438160\t6445897\tDEL\n1\t7570074\t7571521\tDEL\n1\t8200707\t8211256\tDUP\n1\t10482499\t10483790\tDEL\n1\t11682873\t11683189\tDEL\n1\t17026064\t17052112\tCNV\n1\t17208619\t17225378\tCNV\n1\t17238417\t17266696\tCNV\n1\t17263114\t17273513\tCNV\n1\t17676165\t17677662\tDEL\n1\t17684764\t17685086\tDEL_ALU\n1\t20864015\t20864732\tDEL\n1\t21786418\t21786695\tDEL\n1\t23981142\t23981143\tALU;TSD=AACAGATGGGGCATC\n1\t25592642\t25661222\tCNV\n1\t25688926\t25700415\tCNV\n1\t27804112\t27804441\tDEL_ALU\n1\t30298152\t30298204\tDEL\n1\t35101427\t35111985\tDEL\n1\t35627104\t35627431\tDEL\n1\t36733282\t36733515\tDEL\n1\t36749217\t36749269\tDEL\n1\t37215810\t37215811\tALU;TSD=AAAAAATTAAATTTA\n1\t37816478\t37816722\tDEL\n1\t43857455\t43857791\tDEL_ALU\n1\t44059290\t44059950\tINV\n1\t44208924\t44208925\tALU;TSD=AAAACAGAGCCCCC\n1\t46366107\t46366436\tDEL_ALU\n1\t49549776\t49549830\tDEL\n1\t50912662\t50912663\tALU;TSD=CCCTAATAATTTTC\n1\t56887702\t56888019\tDEL_ALU\n1\t58071869\t58071870\tALU;TSD=TTTTCCGGTATTTTT\n1\t58343211\t58343535\tDEL_ALU\n1\t58743910\t58744826\tDEL\n1\t60046725\t60050638\tDEL\n1\t60048628\t60049655\tDEL\n1\t62113386\t62119528\tDEL\n1\t62390586\t62390935\tDEL_ALU\n1\t62654739\t62657162\tDEL\n1\t63151819\t63152158\tDEL_ALU\n1\t64958078\t64958079\tALU;TSD=CCCCCTATTGTTTTCTT\n1\t65909622\t65909892\tDEL_LINE1\n1\t68007970\t68008811\tDEL\n1\t69806992\t69807311\tDEL_ALU\n1\t69943715\t69944021\tDEL_ALU\n1\t70027325\t70027682\tDEL_ALU\n1\t70061670\t70061671\tALU;TSD=ATAAAGTAGCTTGTG\n1\t70946189\t70946520\tDEL_ALU\n1\t71148798\t71149047\tDEL\n1\t71741319\t71741629\tDEL_ALU\n1\t72755694\t72764095\tDEL\n1\t72766343\t72811815\tDEL\n1\t72778537\t72784594\tDEL\n1\t74312425\t74312678\tDEL\n1\t74471655\t74471656\tALU;TSD=AAAAATTTAGTCTC\n1\t75192907\t75192908\tLINE1;TSD=CCGTATTAGTTCATTTTC\n1\t78649157\t78654148\tDEL\n1\t79331208\t79331209\tALU;TSD=TGAGCATATTTTC\n1\t79582082\t79582083\tALU;TSD=GATTTTT\n1\t80299106\t80299107\tALU;TSD=GCATTGTTTT\n1\t81194341\t81194668\tDEL_ALU\n1\t83042644\t83042964\tDEL_ALU\n1\t84517858\t84524770\tDEL_LINE1\n1\t85620127\t85620128\tALU;TSD=TCT\n1\t85980461\t86006144\tCNV\n1\t86405790\t86406118\tDEL_ALU\n1\t86740980\t86741697\tDEL_LINE1\n1\t89475930\t89478613\tDEL\n1\t91624771\t91625054\tDEL_ALU\n1\t92232051\t92233331\tDEL\n1\t93167530\t93167531\tALU;TSD=TATGTTATTTT\n1\t93498232\t93498233\tALU;TSD=AGATTCCTTTTTCTAATTCT\n1\t100551660\t100551661\tALU;TSD=AAATTAATACAAATGAG\n1\t100994221\t100994222\tALU;TSD=AAAATTTCATG\n1\t105255038\t105256195\tDEL\n1\t105667567\t105668446\tDEL\n1\t106015797\t106023398\tDEL\n1\t110187159\t110191392\tDEL\n1\t110225019\t110245280\tDEL\n1\t110230075\t110241247\tCNV\n1\t112074694\t112074805\tDEL\n1\t112691740\t112704718\tDEL\n1\t112834896\t112837824\tDEL\n1\t112992009\t112992010\tALU;TSD=CCAGACACGTTATTT\n1\t113799625\t113800089\tDEL\n1\t118091036\t118091258\tDEL_ALU\n1\t119080704\t119080705\tALU;TSD=GCAACCAGCTTTT\n1\t143984622\t144094733\tCNV\n1\t144468090\t144480623\tDEL\n1\t144691202\t144710622\tCNV\n1\t144839080\t144849492\tCNV\n1\t144862244\t144892802\tCNV\n1\t144913699\t144951391\tCNV\n1\t144973077\t144989257\tDUP\n1\t145120320\t145182150\tCNV\n1\t146081807\t146164363\tCNV\n1\t148832244\t148954132\tCNV\n1\t149015523\t149036627\tCNV\n1\t149218121\t149218122\tALU;TSD=null\n1\t149231192\t149241216\tCNV\n1\t149249429\t149284877\tCNV\n1\t149289438\t149358445\tCNV\n1\t149532289\t149572952\tDEL\n1\t150037842\t150037898\tDEL_ALU\n1\t152760084\t152770547\tDEL\n1\t153133703\t153133960\tDEL\n1\t153252216\t153252217\tLINE1;TSD=TGTCA\n1\t157540655\t157540871\tDEL\n1\t157887236\t157887845\tINV\n1\t158489615\t158491973\tDEL\n1\t158867540\t158869980\tDEL\n1\t158961353\t158966208\tDEL\n1\t159648708\t159649659\tDEL\n1\t162052665\t162052985\tDEL_ALU\n1\t162761322\t162761323\tALU;TSD=CATTTGGCATTTTT\n1\t163314443\t163314444\tALU;TSD=AGAAGTGGGTAG\n1\t165659306\t165659307\tALU;TSD=AA\n1\t165731209\t165731489\tDEL\n1\t169225213\t169245324\tDEL\n1\t170964063\t170964064\tALU;TSD=AAGATTATAGCCCAGACC\n1\t171358314\t171358315\tALU;TSD=CAAAAGTTTTACTCTTT\n1\t171783587\t171783649\tDEL\n1\t174333015\t174333016\tALU;TSD=TGTCAAACCATTCTT\n1\t175071066\t175077094\tCNV\n1\t178495321\t178495683\tDEL\n1\t178948185\t178948186\tALU;TSD=AAAGAAAATCGCTT\n1\t179491966\t179491967\tALU;TSD=ATATCCTAATT\n1\t180183831\t180184150\tDEL_ALU\n1\t180292989\t180293313\tDEL_ALU\n1\t180857564\t180857565\tALU;TSD=TAAAATTGAGATAGC\n1\t187464747\t187466829\tDEL\n1\t187716053\t187722514\tDEL\n1\t188186464\t188186465\tALU;TSD=CCCGGGTAAGTTAAACATTTTTT\n1\t188539457\t188540228\tDEL\n1\t188994948\t188995283\tDEL_ALU\n1\t189247039\t189247040\tALU;TSD=AAAAAATATTCA\n1\t190837319\t190837490\tDEL\n1\t190874469\t190874470\tALU;TSD=GGGCTGAAAACTCTTTATATTTGTGTTT\n1\t192609798\t192609864\tDEL\n1\t194451056\t194454312\tDEL\n1\t194517604\t194517863\tDEL\n1\t194675140\t194675141\tALU;TSD=AAAATTGAGTATATC\n1\t197894025\t197894310\tDEL\n1\t198003599\t198007023\tDEL\n1\t199110049\t199113807\tDEL\n1\t205178526\t205178807\tINV\n1\t207292375\t207292595\tDEL\n1\t207292405\t207293149\tDEL\n1\t207542027\t207545525\tCNV\n1\t209935335\t209936076\tDEL\n1\t210078053\t210085978\tDEL\n1\t211965009\t211965782\tDEL\n1\t212471179\t212472619\tDEL\n1\t213002037\t213013756\tDEL\n1\t213083966\t213086597\tDEL\n1\t217024868\t217024869\tALU;TSD=AAAAAGAGGCCAGAG\n1\t217457929\t217458372\tDEL\n1\t217754074\t217754377\tDEL_ALU\n1\t217913513\t217913514\tALU;TSD=GGCCTTTCTTCTT\n1\t218245628\t218246489\tDEL_LINE1\n1\t219574692\t219574693\tALU;TSD=GCCTTTTCTTTTTTT\n1\t222374169\t222380531\tDEL\n1\t225996433\t225996434\tALU;TSD=AAGAGTAACGAAT\n1\t228024093\t228024405\tDEL_ALU\n1\t228959933\t228959934\tALU;TSD=CTTTGTATAGTTTTT\n1\t231085161\t231085162\tALU;TSD=AAAAAAAAAAA\n1\t232458585\t232460249\tDEL\n1\t232587774\t232587775\tALU;TSD=AAAAATGTGGCATT\n1\t232836575\t232836759\tDEL\n1\t233962115\t233963557\tDEL\n1\t234805728\t234805729\tALU;TSD=TGATTATATGTTTTCT\n1\t236548998\t236551425\tDEL\n1\t236594925\t236595250\tDEL_ALU\n1\t237569208\t237569209\tALU;TSD=GAAAAAACTTTCTT\n1\t239780157\t239780158\tALU;TSD=AAAAATATTCCA\n1\t240134858\t240134859\tALU;TSD=null\n1\t240616990\t240617314\tDEL_ALU\n1\t241149856\t241150181\tDEL_ALU\n1\t241360537\t241360852\tDEL_ALU\n1\t241586225\t241586489\tDEL\n1\t243127774\t243129222\tDEL\n1\t243782747\t243783759\tDEL\n1\t246167282\t246167379\tDEL\n1\t248839443\t248841018\tDEL\n2\t296361\t296424\tDEL\n2\t2539950\t2539951\tALU;TSD=TCAGCGGGTATTTTTT\n2\t2798774\t2799246\tDEL\n2\t3718461\t3718462\tALU;TSD=AGAAGG\n2\t5562912\t5562913\tALU;TSD=AAAAAATTCTGAGTGGT\n2\t6693415\t6707844\tDEL\n2\t9959221\t9959571\tDEL_ALU\n2\t11426375\t11426376\tALU;TSD=TAAGCAGATGTTTTT\n2\t15163766\t15163767\tALU;TSD=AAGATTATATCTT\n2\t15166285\t15166611\tDEL_ALU\n2\t15519553\t15519554\tALU;TSD=AAGAAGCTGATGGA\n2\t16271567\t16273799\tDEL\n2\t17585118\t17590610\tDEL\n2\t18306417\t18306418\tALU;TSD=AAGAAAGGAAAAAAT\n2\t20666665\t20666972\tDEL_ALU\n2\t23191016\t23191017\tLINE1;TSD=CCTGAGACTGGGTAATTTAT\n2\t26623683\t26623684\tALU;TSD=GGAAGAACTGATTTT\n2\t27527254\t27527255\tALU;TSD=null\n2\t28353920\t28354247\tDEL_ALU\n2\t28661665\t28661718\tDEL\n2\t28720773\t28721321\tDEL\n2\t31559696\t31559697\tALU;TSD=AAAAAGAGAAAGCCCC\n2\t31952210\t31952211\tALU;TSD=AAAAAGTAGAATGG\n2\t33091742\t33091743\tLINE1;TSD=null\n2\t33764554\t33765272\tINV\n2\t34255392\t34255393\tALU;TSD=CCATTCACAGTTCT\n2\t34523576\t34525669\tDEL\n2\t34643630\t34643937\tDEL_ALU\n2\t34965683\t34967221\tDEL\n2\t35975766\t35997215\tDEL\n2\t36955660\t36955976\tDEL_ALU\n2\t38956737\t38974142\tDUP\n2\t39071477\t39071819\tDEL_ALU\n2\t39315339\t39315340\tALU;TSD=ATCAGTGGTTCTT\n2\t40446946\t40447073\tDEL\n2\t40613688\t40613689\tALU;TSD=AAAAAAGAGATAATG\n2\t41775944\t41781288\tDEL\n2\t41973027\t41976041\tDEL\n2\t43024076\t43024077\tALU;TSD=CATTTTTTC\n2\t46196199\t46196200\tALU;TSD=AAAATATTCATTGAT\n2\t46910132\t46910448\tDEL_ALU\n2\t46928953\t46928954\tALU;TSD=TTT\n2\t47319298\t47319299\tALU;TSD=GCATTTTCTAATTTTTCT\n2\t48276534\t48276535\tALU;TSD=AGAAATTCAAATGCA\n2\t48990526\t48991166\tDEL\n2\t49612882\t49613205\tDEL_ALU\n2\t50602644\t50602645\tALU;TSD=AATTCTGAAGCTCTT\n2\t51469239\t51469240\tALU;TSD=AAAATCATAAATTTT\n2\t51926595\t51927817\tDEL\n2\t52749687\t52785269\tDEL\n2\t54565490\t54567478\tDEL\n2\t56652306\t56655874\tDEL\n2\t56850110\t56850433\tDEL_ALU\n2\t57247962\t57247963\tALU;TSD=GTATGTCTTCTTTT\n2\t59644944\t59644994\tDEL\n2\t59874277\t59874278\tALU;TSD=AACAGAAAAATAACTACAAGGG\n2\t62457099\t62457426\tDEL_ALU\n2\t62501912\t62501913\tALU;TSD=AGCTATACATTCTT\n2\t64694288\t64705094\tDEL\n2\t65807507\t65807817\tDEL_ALU\n2\t66505568\t66507543\tDEL\n2\t66658991\t66658992\tALU;TSD=AGAAAACAAAAGAA\n2\t70125033\t70125561\tDEL\n2\t70797718\t70797719\tALU;TSD=CCCTCCTTCTAATTCTATT\n2\t72244731\t72244732\tALU;TSD=null\n2\t72440495\t72441373\tINV\n2\t75387903\t75387904\tALU;TSD=AAGACATAACCGA\n2\t76257717\t76257718\tALU;TSD=TTTCACCTATTTGCATATTCTTTTTTT\n2\t79057647\t79057983\tDEL_ALU\n2\t82340445\t82340765\tDEL_ALU\n2\t84590146\t84590147\tALU;TSD=CAATAGACCCATCTC\n2\t84728755\t84728756\tALU;TSD=AAAAGTTTGGTAAA\n2\t84758440\t84758733\tDEL_ALU\n2\t88320968\t88321215\tDEL_ALU\n2\t89132270\t89155860\tDEL\n2\t91865750\t91925129\tCNV\n2\t97854287\t97856138\tDEL\n2\t98136216\t98156567\tCNV\n2\t99752964\t99753300\tDEL_ALU\n2\t100103689\t100105021\tDEL\n2\t101975203\t101975536\tDEL_ALU\n2\t106452585\t106452586\tALU;TSD=GGATTTCCTTTTCTTTGTT\n2\t106694799\t106696035\tDEL\n2\t106695055\t106695893\tDEL\n2\t106695492\t106695752\tDEL\n2\t106880209\t106885796\tCNV\n2\t106930527\t106930629\tDEL\n2\t111576391\t111576633\tDEL\n2\t112447436\t112447437\tALU;TSD=CCCAAATGATTTTC\n2\t112453948\t112453949\tALU;TSD=GAGAGATTTATTTT\n2\t114106446\t114106447\tALU;TSD=AAGAAATCAGAAAA\n2\t114151313\t114153614\tDEL\n2\t115628104\t115628838\tDEL\n2\t116662058\t116662652\tDEL\n2\t117334924\t117335240\tDEL_ALU\n2\t117893050\t117893389\tDEL_ALU\n2\t118906129\t118906281\tDEL_ALU\n2\t121797802\t121798397\tDEL\n2\t122056855\t122058006\tDEL\n2\t122623755\t122623809\tDEL\n2\t123330661\t123330662\tALU;TSD=AAGAAAAATCCACTGA\n2\t123364885\t123365367\tDEL\n2\t123476599\t123482503\tINV\n2\t123477289\t123482545\tDEL\n2\t124054928\t124054929\tALU;TSD=GAGCTTTATTTTT\n2\t126368481\t126370218\tDEL\n2\t126443247\t126451831\tDEL\n2\t126641642\t126641643\tALU;TSD=AAGAAACTATT\n2\t127674757\t127677270\tDEL\n2\t131423474\t131426399\tDEL\n2\t131424936\t131428361\tDEL\n2\t131463320\t131475704\tDEL\n2\t132335225\t132335331\tDEL_ALU\n2\t139380788\t139380789\tALU;TSD=AACAACAGCTCTG\n2\t143434605\t143434943\tDEL_ALU\n2\t144010793\t144010794\tLINE1;TSD=AAAAAGTTTGATGGA\n2\t145346767\t145346768\tALU;TSD=AATAAATATTTACAA\n2\t146842402\t146842549\tDEL\n2\t146862622\t146876866\tDEL\n2\t146868295\t146876318\tDEL\n2\t147020933\t147020934\tLINE1;TSD=AGAAATACT\n2\t148650072\t148650073\tALU;TSD=AACTTTTTT\n2\t150759300\t150759621\tDEL_ALU\n2\t151903083\t151903359\tDEL_ALU\n2\t152041204\t152041492\tDEL\n2\t153153401\t153153488\tDEL\n2\t154064575\t154064678\tDEL\n2\t154160685\t154160686\tALU;TSD=CACTGTTCTGTTTTT\n2\t154494940\t154495150\tDEL\n2\t156750284\t156750369\tDEL\n2\t156833715\t156835494\tDEL\n2\t158433337\t158433666\tDEL_ALU\n2\t158719085\t158719396\tDEL_ALU\n2\t159285147\t159285148\tALU;TSD=AAAAAGTCAGGAAACA\n2\t159661933\t159662894\tDEL\n2\t159958908\t159961502\tDEL\n2\t160855851\t160856174\tDEL_ALU\n2\t161795600\t161795924\tDEL_ALU\n2\t161952337\t161952338\tALU;TSD=AAAAAAAAAAAAAAAATAGGC\n2\t162332269\t162334045\tDEL\n2\t163666408\t163666723\tDEL_ALU\n2\t163678631\t163678632\tALU;TSD=AAATTTTACATTTT\n2\t167545980\t167547056\tDEL\n2\t167550210\t167550286\tDEL\n2\t169395462\t169395774\tDEL_ALU\n2\t169606131\t169606207\tDEL\n2\t173522171\t173522172\tALU;TSD=TCGATACTGCTTTT\n2\t175090625\t175090945\tDEL_ALU\n2\t177265639\t177272040\tDEL\n2\t178287642\t178288052\tDEL\n2\t178351472\t178351473\tALU;TSD=CTATATGTATATTTTTAT\n2\t178648956\t178648957\tALU;TSD=AAACAGGATGTGGTA\n2\t181000555\t181000556\tLINE1;TSD=AGAAAATATAGGTCTC\n2\t181925827\t181926149\tDEL_ALU\n2\t182262200\t182262201\tALU;TSD=AACAAGAAGGAATACAGAG\n2\t182355971\t182356286\tDEL_ALU\n2\t183315806\t183316121\tDEL_ALU\n2\t183354710\t183354784\tDEL\n2\t188215718\t188216025\tDEL_ALU\n2\t189119663\t189120979\tDEL\n2\t189959434\t189959435\tALU;TSD=AAGAAACATACCA\n2\t191635470\t191635523\tDEL\n2\t191680779\t191680874\tDEL\n2\t193355404\t193355708\tDEL_ALU\n2\t194689469\t194698782\tDEL\n2\t195477627\t195477734\tDEL_ALU\n2\t196031309\t196031614\tDEL_ALU\n2\t196051814\t196052084\tDEL_LINE1\n2\t196214818\t196215228\tDEL\n2\t198758284\t198761579\tCNV\n2\t198894512\t198894649\tDEL\n2\t199779914\t199779915\tLINE1;TSD=AGAAAGTATATAATCT\n2\t200312454\t200312679\tDEL\n2\t202721648\t202721969\tDEL_ALU\n2\t206113734\t206121786\tDEL\n2\t206128030\t206129895\tDEL\n2\t206731182\t206731505\tDEL_ALU\n2\t208910336\t208910651\tDEL_ALU\n2\t208959107\t208959450\tDEL_ALU\n2\t209061157\t209061477\tDEL_ALU\n2\t209451717\t209452044\tDEL_ALU\n2\t212161556\t212161620\tDEL\n2\t212551245\t212551542\tDEL_ALU\n2\t214775204\t214775511\tDEL_ALU\n2\t214778297\t214778363\tDEL\n2\t215201641\t215201642\tALU;TSD=AAAGACTAAG\n2\t215728762\t215730832\tDEL\n2\t216548435\t216548436\tALU;TSD=AAAAAATCAGTAAATTC\n2\t217158346\t217158727\tDEL\n2\t218265091\t218265092\tALU;TSD=AAGACTGGTGG\n2\t220052322\t220052915\tDEL\n2\t220052751\t220056378\tDEL\n2\t221503768\t221503769\tLINE1;TSD=ATCAACATGTTCATTTCTT\n2\t221568789\t221572221\tDEL\n2\t223481690\t223481979\tDEL_ALU\n2\t223797358\t223797675\tDEL_ALU\n2\t225292994\t225293946\tDEL\n2\t227017557\t227017806\tDEL_ALU\n2\t237701915\t237701977\tDEL\n2\t238553978\t238559216\tDEL\n2\t240958939\t240959261\tDEL_ALU\n2\t241125050\t241125406\tDEL\n3\t228934\t234185\tCNV\n3\t571750\t572075\tDEL_ALU\n3\t1629482\t1629541\tDEL\n3\t2311586\t2311934\tDEL_ALU\n3\t2962004\t2962005\tALU;TSD=AGAAGGAGGCTGGAT\n3\t6103050\t6103051\tALU;TSD=CCAGGATGGAATCTTT\n3\t6525411\t6525412\tALU;TSD=TGGCCTTCTTTTTT\n3\t6650202\t6654630\tDEL\n3\t6700872\t6701254\tDEL\n3\t7130385\t7130386\tALU;TSD=CACTGATTTCTTATT\n3\t7538755\t7538756\tALU;TSD=AAGATTTACC\n3\t8325606\t8326807\tDEL\n3\t10397456\t10397805\tDEL_ALU\n3\t11645651\t11646732\tDEL\n3\t12196517\t12196572\tDEL\n3\t12818468\t12818469\tALU;TSD=GGGGCTGTTGTTTATT\n3\t13681157\t13682269\tDEL\n3\t16239410\t16241213\tDEL\n3\t17948538\t17948858\tDEL_ALU\n3\t19035452\t19035453\tALU;TSD=AAAACCAAGGTCAT\n3\t20919491\t20919766\tDEL\n3\t21457497\t21457820\tDEL_ALU\n3\t23764057\t23764387\tDEL_ALU\n3\t25030880\t25032246\tDEL\n3\t25278459\t25278460\tALU;TSD=TCCTGTTTCTTT\n3\t26123847\t26123975\tDEL\n3\t26432727\t26439290\tCNV\n3\t26469887\t26469982\tDEL\n3\t26524464\t26524465\tLINE1;TSD=AAATAGCCACGTTTTTCT\n3\t29550384\t29550385\tALU;TSD=TAATGATCGCCATTCT\n3\t31856630\t31856688\tDEL\n3\t32102050\t32107887\tDEL\n3\t32203861\t32204143\tDEL_ALU\n3\t32940758\t32940854\tDEL\n3\t35051657\t35051985\tDEL_ALU\n3\t35709332\t35709431\tDEL\n3\t36108120\t36108438\tDEL_ALU\n3\t37361602\t37361603\tALU;TSD=null\n3\t38399708\t38399709\tALU;TSD=AAAAGTTTGGT\n3\t39260355\t39260421\tDEL\n3\t40241622\t40241623\tALU;TSD=TACATTTTCTTTTT\n3\t45542662\t45542663\tALU;TSD=TGGAATTTTT\n3\t45768351\t45768676\tDEL_ALU\n3\t48957701\t48959056\tDEL\n3\t49494276\t49494605\tDEL_ALU\n3\t50123658\t50124725\tDEL\n3\t50879175\t50879176\tALU;TSD=TATTGTTACCTTTTCT\n3\t53027106\t53038920\tDEL\n3\t55788580\t55788581\tLINE1;TSD=AAATATGAATTTA\n3\t56604704\t56604961\tDEL\n3\t59852903\t59852904\tLINE1;TSD=AATAATCAGCAGAACCA\n3\t61475048\t61475371\tDEL_ALU\n3\t61666415\t61666685\tDEL\n3\t63540965\t63540966\tALU;TSD=AGAAAAATACTTCCT\n3\t66951653\t66951654\tALU;TSD=TGATTTTGTTGATCTTTT\n3\t68634740\t68640254\tDEL\n3\t68739655\t68747879\tDEL\n3\t70415105\t70415440\tDEL_ALU\n3\t73063077\t73063554\tDEL\n3\t74765412\t74765735\tDEL_ALU\n3\t75367119\t75367200\tDEL\n3\t75423550\t75458952\tCNV\n3\t75423612\t75642120\tDEL\n3\t75495797\t75527865\tCNV\n3\t75532164\t75569195\tCNV\n3\t75597940\t75615947\tCNV\n3\t76222309\t76222310\tALU;TSD=AAAATTCTTTGA\n3\t76985883\t76985884\tALU;TSD=AAGAATTCATTTT\n3\t80062916\t80064350\tDEL\n3\t80964882\t80964883\tALU;TSD=AAAATTT\n3\t81346065\t81346380\tDEL_ALU\n3\t81907492\t81907812\tDEL_ALU\n3\t83304066\t83304067\tALU;TSD=A\n3\t84104923\t84107402\tDEL\n3\t84404171\t84404243\tDEL\n3\t85576571\t85576572\tLINE1;TSD=AAAACAAAGAAAGAAAAAATTCTGTGG\n3\t86213403\t86213720\tDEL\n3\t87482522\t87482606\tDEL\n3\t88453730\t88454008\tDEL\n3\t95116192\t95116522\tDEL_ALU\n3\t95465681\t95470805\tDEL\n3\t95465761\t95468120\tDEL\n3\t95874517\t95874518\tALU;TSD=AAGAAATGC\n3\t98410648\t98414803\tDEL\n3\t98899063\t98902396\tDEL\n3\t98982423\t98982496\tDEL\n3\t99037445\t99037757\tDEL_ALU\n3\t99605060\t99605113\tDEL\n3\t99628781\t99629631\tDEL\n3\t99785350\t99785656\tDEL_ALU\n3\t101357527\t101359730\tDEL\n3\t103453396\t103453397\tALU;TSD=GAGTAAAATTCTTTTT\n3\t104278168\t104279030\tDEL\n3\t104645425\t104645596\tDEL\n3\t106813625\t106813789\tDEL\n3\t110271029\t110271030\tALU;TSD=AAAATTCTTTA\n3\t111226375\t111226376\tALU;TSD=AAAAATAAAATCA\n3\t111243593\t111248855\tDEL\n3\t112466720\t112466721\tSVA;TSD=GAGGGAGAGACATATTTTTCTTCCTTTT\n3\t112467382\t112467712\tDEL_ALU\n3\t113854021\t113854347\tDEL_ALU\n3\t114466474\t114466798\tDEL_ALU\n3\t116204836\t116205180\tDEL\n3\t116275271\t116275595\tDEL_ALU\n3\t118281607\t118281829\tDEL\n3\t119419835\t119420548\tDEL\n3\t119419882\t119420336\tDEL\n3\t119893984\t119894448\tDEL\n3\t122138442\t122138768\tDEL_ALU\n3\t123236746\t123237061\tDEL_ALU\n3\t124808631\t124808632\tALU;TSD=TC\n3\t124936320\t124937213\tDEL\n3\t125672301\t125676371\tDEL\n3\t126090202\t126090203\tSVA;TSD=AGAAGGAGCTGTCTT\n3\t126358922\t126359249\tDEL_ALU\n3\t128672140\t128675334\tDEL\n3\t129938434\t129938435\tALU;TSD=AAATAAAGAATGAATGGGAGC\n3\t131708252\t131713384\tDEL\n3\t131989128\t131994876\tCNV\n3\t134673902\t134674555\tDEL\n3\t139425868\t139425926\tDEL\n3\t144687884\t144687885\tALU;TSD=TGGTTTGTAATTTATT\n3\t144693110\t144693236\tDEL\n3\t144888422\t144888910\tDEL\n3\t145069463\t145069464\tALU;TSD=AAAAATAATGTCACTGT\n3\t146385228\t146390409\tDEL\n3\t148566792\t148567110\tDEL_ALU\n3\t148844372\t148844700\tDEL_ALU\n3\t151503209\t151503269\tDEL\n3\t151748850\t151748851\tALU;TSD=AAGAATAGCTTAACATG\n3\t152053972\t152053973\tALU;TSD=AAAAATGTAATCTG\n3\t156092162\t156093688\tDEL\n3\t158350719\t158351910\tDEL\n3\t159257018\t159257691\tDEL\n3\t159428985\t159429184\tDEL_ALU\n3\t161246712\t161247047\tDEL_ALU\n3\t162408296\t162408612\tDEL_ALU\n3\t162512202\t162525833\tDEL\n3\t162514471\t162625647\tDEL\n3\t162525834\t162545193\tDEL\n3\t162558858\t162601552\tDEL\n3\t162764905\t162769085\tDEL\n3\t163464167\t163464473\tDEL_ALU\n3\t166362314\t166362315\tALU;TSD=AAAAAGGGGG\n3\t168199075\t168199076\tALU;TSD=CATGCCTGACTCT\n3\t168738458\t168738838\tDEL\n3\t169474323\t169474324\tALU;TSD=AAGACTTGAGG\n3\t173268419\t173268477\tDEL\n3\t177381336\t177385447\tDEL\n3\t177896496\t177896554\tDEL\n3\t178550124\t178550897\tDEL\n3\t178567629\t178568339\tDEL\n3\t179654342\t179654808\tDEL\n3\t180091672\t180091673\tLINE1;TSD=null\n3\t183876797\t183877385\tDEL\n3\t185017328\t185017653\tDEL_ALU\n3\t186826655\t186826969\tDEL_ALU\n3\t188304831\t188305164\tDEL_ALU\n3\t189575894\t189576216\tDEL_ALU\n3\t189737175\t189740648\tDEL\n3\t189955408\t189955709\tDEL_ALU\n3\t190290639\t190290936\tDEL_ALU\n3\t190478458\t190478634\tDEL\n3\t190999464\t190999465\tALU;TSD=TGTACTCTATTTTC\n3\t191064690\t191071659\tDEL\n3\t191856085\t191856423\tDEL_ALU\n3\t191889929\t191891307\tDEL\n3\t192045380\t192045381\tALU;TSD=null\n3\t192875329\t192885405\tDEL\n3\t194398762\t194400296\tDEL\n3\t195417835\t195445776\tCNV\n3\t195452012\t195457240\tCNV\n3\t195457317\t195471062\tDEL\n3\t195505831\t195507123\tDEL\n3\t195569206\t195569923\tDEL\n3\t195680898\t195693668\tCNV\n3\t195773919\t195774981\tDEL\n3\t196055919\t196056883\tDEL\n4\t401039\t401369\tDEL_ALU\n4\t6651592\t6652912\tDEL\n4\t6897351\t6900401\tDEL\n4\t7569173\t7569174\tALU;TSD=CTGGTCAGGTGTTTTTT\n4\t7635491\t7635854\tDEL\n4\t7750915\t7750916\tALU;TSD=null\n4\t9157568\t9214307\tDEL\n4\t9186956\t9206735\tDEL\n4\t9457406\t9481022\tCNV\n4\t9573062\t9573170\tDEL\n4\t9576978\t9577452\tDEL\n4\t9603244\t9603245\tSVA;TSD=AAGTTC\n4\t9704849\t9704850\tSVA;TSD=AAGAAAATCACCATAAATCAGA\n4\t10211223\t10234580\tDEL\n4\t12239264\t12239265\tALU;TSD=null\n4\t16426943\t16426999\tDEL\n4\t16917031\t16917489\tINV\n4\t17202756\t17203066\tDEL_ALU\n4\t19643112\t19643453\tDEL_ALU\n4\t22432891\t22432952\tDEL\n4\t23721664\t23721985\tDEL_ALU\n4\t26438630\t26438631\tALU;TSD=TGCTAACATTCTT\n4\t28320770\t28320771\tALU;TSD=AACAAAAAAAAGTAGACAA\n4\t28421593\t28421942\tDEL\n4\t29661109\t29661437\tDEL_ALU\n4\t29907839\t29907840\tALU;TSD=GACATGTAATATTTTT\n4\t35240260\t35244433\tDEL\n4\t36469904\t36470237\tDEL_ALU\n4\t36652565\t36652676\tDEL\n4\t36780614\t36780937\tDEL_ALU\n4\t37483080\t37483138\tDEL\n4\t38264296\t38265498\tDEL\n4\t39031076\t39031358\tDEL_ALU\n4\t40024928\t40026278\tDEL\n4\t40235048\t40237039\tINV\n4\t41068089\t41068205\tDEL\n4\t42762647\t42769523\tDEL\n4\t43399986\t43399987\tALU;TSD=GAAATTTAAGCTA\n4\t43751813\t43752122\tDEL\n4\t43931499\t43931838\tDEL\n4\t44507275\t44507729\tDEL_LINE1\n4\t44509377\t44509695\tDEL_ALU\n4\t44971996\t44972168\tDEL\n4\t46202797\t46205026\tDEL\n4\t54415654\t54415655\tALU;TSD=AAGAGATGTGG\n4\t55482419\t55482740\tDEL_ALU\n4\t55808674\t55808918\tDEL_ALU\n4\t55998554\t55998888\tDEL_ALU\n4\t57501858\t57501984\tDEL\n4\t58087336\t58087734\tDEL_LINE1\n4\t58148016\t58148342\tDEL_ALU\n4\t59348231\t59348282\tDEL\n4\t59985387\t59985494\tDEL\n4\t61330102\t61333188\tDEL\n4\t61569228\t61569558\tDEL_ALU\n4\t61939189\t61942243\tDEL\n4\t63668999\t63676240\tDEL\n4\t63670474\t63671759\tDEL\n4\t64563186\t64563187\tALU;TSD=AAGAAAAAACTGTGTG\n4\t65216746\t65216747\tALU;TSD=AAAAAGTG\n4\t66641109\t66641420\tDEL_LINE1\n4\t67106616\t67106617\tALU;TSD=AGAAAGATTAAGATTTGC\n4\t67754010\t67754011\tALU;TSD=AAATAGACTCTTT\n4\t67963892\t67963893\tALU;TSD=TCCTTACAACTTTT\n4\t68873177\t68873246\tDEL\n4\t69959841\t69960165\tDEL_ALU\n4\t71926412\t71926572\tDEL_ALU\n4\t72829626\t72829955\tDEL_ALU\n4\t73418754\t73418842\tDEL\n4\t73831245\t73831819\tDEL\n4\t78199221\t78199273\tDEL\n4\t78236274\t78236540\tDEL_LINE1\n4\t79159515\t79159516\tALU;TSD=TAAAAAAGCT\n4\t80205728\t80206056\tDEL_ALU\n4\t80360637\t80362723\tDEL\n4\t81302526\t81302865\tDEL_ALU\n4\t81991515\t81991836\tDEL_ALU\n4\t82630148\t82630149\tALU;TSD=AAAATATCAGACTTCA\n4\t84221708\t84221993\tDEL_ALU\n4\t86470382\t86470383\tALU;TSD=AAGAAATTGCCA\n4\t86584502\t86584503\tALU;TSD=AAGAATGCTTGTG\n4\t87066353\t87066535\tDEL_ALU\n4\t88032137\t88032469\tDEL_ALU\n4\t88775635\t88775952\tDEL_ALU\n4\t89681460\t89681782\tDEL_ALU\n4\t91931556\t91935838\tDEL\n4\t91931666\t91933538\tDEL\n4\t91933849\t91936097\tDEL\n4\t93393064\t93393384\tDEL_ALU\n4\t94439081\t94439177\tDEL\n4\t95498964\t95499280\tDEL_ALU\n4\t96382454\t96382660\tDEL\n4\t98110644\t98110970\tDEL_ALU\n4\t98133375\t98133689\tDEL_ALU\n4\t98181261\t98181582\tDEL_ALU\n4\t98354318\t98359087\tCNV\n4\t98590652\t98590970\tDEL_ALU\n4\t100023042\t100023377\tDEL_ALU\n4\t100070288\t100070604\tDEL_ALU\n4\t101244846\t101245110\tDEL_ALU\n4\t101293066\t101293136\tDEL\n4\t101390634\t101390812\tDEL\n4\t102712356\t102712409\tDEL\n4\t102787786\t102788351\tDEL_LINE1\n4\t104894032\t104894690\tDEL\n4\t106507402\t106507403\tALU;TSD=AAGAAATGCAAACA\n4\t106636862\t106636863\tALU;TSD=AAAATATTAAAGA\n4\t107437718\t107438504\tDEL\n4\t107840622\t107840967\tDEL\n4\t111383200\t111383532\tDEL_ALU\n4\t111516319\t111516509\tDEL\n4\t113348500\t113348562\tDEL\n4\t113469974\t113470281\tDEL_ALU\n4\t115549930\t115549931\tALU;TSD=AAGAAAG\n4\t115624597\t115624870\tDEL_ALU\n4\t115743887\t115744132\tDEL\n4\t115928726\t115931880\tDEL\n4\t117251478\t117251795\tDEL_ALU\n4\t119125417\t119130206\tDEL\n4\t119296342\t119296678\tDEL_ALU\n4\t119774736\t119774737\tALU;TSD=CTCTAGTTTAGAACTTTTCT\n4\t120017235\t120017555\tDEL_ALU\n4\t120639904\t120639905\tALU;TSD=AAACACCTTCA\n4\t120865434\t120866627\tDEL\n4\t121407647\t121407970\tDEL_ALU\n4\t121582257\t121582258\tALU;TSD=TACTGCTTGTCTT\n4\t121808929\t121809246\tDEL_ALU\n4\t125867361\t125867690\tDEL_ALU\n4\t130062076\t130069013\tDEL\n4\t130066189\t130068435\tDEL\n4\t130590920\t130591211\tDEL_ALU\n4\t131611192\t131611360\tDEL\n4\t131694825\t131695074\tDEL_ALU\n4\t133180785\t133182979\tDEL\n4\t133619876\t133620182\tDEL_ALU\n4\t133819597\t133819920\tDEL_ALU\n4\t134295543\t134295863\tDEL_ALU\n4\t134596423\t134596424\tLINE1;TSD=A\n4\t135433008\t135435698\tDEL\n4\t138091987\t138100624\tDEL\n4\t138177334\t138177335\tLINE1;TSD=AAGAAAGCTA\n4\t138299005\t138299006\tALU;TSD=AAGAATAATGTTACCA\n4\t138966189\t138967210\tDEL\n4\t141497059\t141497126\tDEL\n4\t142230774\t142233063\tDEL\n4\t143029543\t143029600\tDEL\n4\t145316454\t145319900\tDEL\n4\t146438780\t146440426\tDEL\n4\t147225296\t147225297\tLINE1;TSD=AAGAAGTTAAAATAG\n4\t148053950\t148053951\tALU;TSD=AAGAGTAAAGCT\n4\t150161039\t150161381\tDEL_ALU\n4\t150951027\t150951349\tDEL_ALU\n4\t152340705\t152341552\tDEL_LINE1\n4\t157002032\t157002343\tDEL_ALU\n4\t160670214\t160670328\tDEL\n4\t162053240\t162053669\tDEL\n4\t162053282\t162053551\tDEL\n4\t162381498\t162381664\tDEL\n4\t162449273\t162451675\tDEL\n4\t162776133\t162776210\tDEL\n4\t163394004\t163396424\tDEL\n4\t164501940\t164502253\tDEL_ALU\n4\t166002564\t166005042\tDEL\n4\t167004317\t167004917\tDEL\n4\t167669354\t167670581\tDEL\n4\t168806478\t168806590\tDEL\n4\t170278462\t170278879\tDEL\n4\t172374434\t172379470\tDEL\n4\t172988631\t172992933\tDEL\n4\t173176433\t173176487\tDEL\n4\t173425034\t173433521\tDEL\n4\t174044228\t174044229\tALU;TSD=TATTACTGCTTTTT\n4\t174149455\t174149456\tALU;TSD=CTTCTAGTCATTTCT\n4\t178156827\t178157156\tDEL_ALU\n4\t180063822\t180064151\tDEL\n4\t180097876\t180098507\tDEL\n4\t180256972\t180256973\tALU;TSD=TAAATCAAATTTCTTATT\n4\t180600174\t180600258\tDEL\n4\t181317271\t181317454\tDEL_ALU\n4\t181503039\t181503040\tALU;TSD=AATGCTTATTTTT\n4\t181549428\t181549742\tDEL_ALU\n4\t182056564\t182057129\tDEL\n4\t183570005\t183571998\tDEL\n4\t184303686\t184304009\tDEL_ALU\n4\t185665771\t185666089\tDEL_ALU\n4\t185977809\t185977810\tALU;TSD=CTGAATTTT\n4\t186382160\t186382161\tALU;TSD=GGTAGTCACGTTTT\n4\t186441632\t186444075\tDEL\n4\t187093487\t187093488\tALU;TSD=null\n4\t187093487\t187098252\tDEL\n4\t187795697\t187796017\tDEL_ALU\n4\t188200037\t188200038\tALU;TSD=AAAAAATCGC\n4\t188959366\t188959488\tDEL\n4\t189793239\t189793558\tDEL_ALU\n4\t189969676\t189970030\tDEL_ALU\n4\t190058006\t190064283\tDEL_LINE1\n4\t190105408\t190106160\tDEL\n4\t190253838\t190254160\tDEL_ALU\n4\t190291418\t190291737\tDEL_ALU\n4\t190302417\t190302714\tDEL\n5\t167619\t167620\tALU;TSD=AAGGAGGTTGGGGG\n5\t608881\t608931\tDEL\n5\t1022803\t1025877\tDEL\n5\t1585517\t1585518\tALU;TSD=AAGAGACCCTCTCTA\n5\t1627140\t1628837\tDEL\n5\t1812652\t1812653\tALU;TSD=GACTCCTCTTTT\n5\t1924587\t1925201\tDEL\n5\t3995199\t3995200\tALU;TSD=AGAAAACGACAGAAATC\n5\t4459411\t4459482\tDEL\n5\t5595248\t5595249\tALU;TSD=GACTTTTT\n5\t7221928\t7222248\tDEL_ALU\n5\t8749528\t8749529\tLINE1;TSD=AAAATTTTTTAATG\n5\t9411760\t9412074\tDEL_ALU\n5\t10273288\t10275414\tDEL\n5\t10574959\t10575294\tDEL\n5\t10756185\t10756522\tDEL\n5\t13399958\t13400032\tDEL\n5\t16525366\t16525419\tDEL\n5\t17712622\t17712623\tALU;TSD=AGAAAAATATACACAAG\n5\t18643248\t18648493\tDEL\n5\t21651568\t21651891\tDEL_ALU\n5\t23903003\t23905242\tDEL\n5\t24452839\t24453161\tDEL_ALU\n5\t25653044\t25653266\tDEL\n5\t25777306\t25777630\tDEL_ALU\n5\t26111186\t26111512\tDEL_ALU\n5\t31677424\t31677745\tDEL_ALU\n5\t32338582\t32338584\tINS\n5\t32762578\t32762579\tALU;TSD=TGTTTCCTGATTTTTT\n5\t33355563\t33355894\tDEL_ALU\n5\t33633348\t33633349\tLINE1;TSD=GAAAAGTCTTCTTT\n5\t34113270\t34113271\tALU;TSD=AAAATATTTAAAGTTTCTG\n5\t35196137\t35196187\tDEL\n5\t35614173\t35614486\tDEL_ALU\n5\t35672335\t35672394\tDEL\n5\t37293799\t37294130\tDEL_ALU\n5\t40181658\t40181659\tALU;TSD=AACACTTTT\n5\t42628418\t42631130\tDEL\n5\t43516480\t43516549\tDEL\n5\t44125522\t44125712\tDEL\n5\t46144216\t46145986\tDEL\n5\t49480966\t49482003\tDEL\n5\t53176928\t53177233\tDEL_ALU\n5\t53755531\t53755619\tDEL\n5\t55429225\t55430342\tDEL\n5\t55870781\t55871076\tDEL\n5\t55927980\t55927981\tALU;TSD=AAAAGATACAGAGA\n5\t57320371\t57338133\tDEL\n5\t57323407\t57333752\tDEL\n5\t57923170\t57923343\tDEL_ALU\n5\t58274026\t58274160\tDEL\n5\t58277277\t58277329\tDEL\n5\t60001696\t60003676\tDEL\n5\t62687444\t62687711\tDEL\n5\t62704438\t62704761\tDEL_ALU\n5\t65346041\t65346371\tDEL_ALU\n5\t68105932\t68106026\tDEL\n5\t70368390\t70391629\tDEL\n5\t73648985\t73649303\tDEL_ALU\n5\t75082293\t75082602\tDEL_ALU\n5\t75435663\t75435781\tDEL_ALU\n5\t77048345\t77048681\tDEL_ALU\n5\t77062308\t77062618\tDEL_ALU\n5\t78276748\t78277072\tDEL_ALU\n5\t78277726\t78278045\tDEL_ALU\n5\t78426567\t78426568\tSVA;TSD=AGGAATCATGGTGAAGCC\n5\t80039371\t80039680\tDEL_ALU\n5\t80751142\t80751471\tDEL_ALU\n5\t81008164\t81008437\tDEL_ALU\n5\t81182479\t81182821\tDEL_ALU\n5\t82156716\t82157031\tDEL_ALU\n5\t82906058\t82906377\tDEL_ALU\n5\t83948134\t83955051\tDEL\n5\t84814477\t84814554\tDEL\n5\t85405341\t85405510\tDEL\n5\t86246008\t86247146\tDEL\n5\t86372695\t86372696\tALU;TSD=AAAGAAAATATTT\n5\t87328660\t87328807\tDEL\n5\t88032012\t88032342\tDEL_ALU\n5\t89450781\t89450782\tLINE1;TSD=GAAAGATGCTTAC\n5\t90499767\t90502128\tDEL\n5\t95343311\t95343665\tDEL_ALU\n5\t95909715\t95910061\tDEL_ALU\n5\t96325017\t96325116\tDEL\n5\t96866423\t96866424\tLINE1;TSD=AAAAAATACATTTTTAG\n5\t97035240\t97035573\tDEL\n5\t98345117\t98347479\tDEL\n5\t98839884\t98842906\tDEL\n5\t99174314\t99174628\tDEL_ALU\n5\t99759460\t99759778\tDEL_ALU\n5\t99923533\t99923838\tDEL_ALU\n5\t100497396\t100497397\tALU;TSD=null\n5\t101693791\t101694719\tDEL\n5\t102163354\t102163607\tDEL_ALU\n5\t103738436\t103738437\tALU;TSD=AAAGTTAAAGTTAATTTT\n5\t104877052\t104877141\tDEL\n5\t106324752\t106326434\tDEL\n5\t110694944\t110695264\tDEL\n5\t112477737\t112478297\tDEL\n5\t113459037\t113459360\tDEL_ALU\n5\t114731312\t114731630\tDEL_ALU\n5\t114969401\t114969875\tDEL\n5\t115130457\t115130806\tDEL\n5\t115894136\t115894457\tDEL_ALU\n5\t116428182\t116428500\tDEL_ALU\n5\t119015144\t119015464\tDEL_ALU\n5\t119380174\t119382671\tDEL\n5\t121059232\t121060007\tDEL\n5\t122274354\t122274677\tDEL_ALU\n5\t122723707\t122723763\tDEL\n5\t122976151\t122976152\tALU;TSD=AAAAAAACAAGGAA\n5\t123963235\t123963291\tDEL\n5\t124363835\t124364161\tDEL_ALU\n5\t124484339\t124484391\tDEL\n5\t126458368\t126458811\tDEL\n5\t127172319\t127173286\tDEL\n5\t127172367\t127172679\tDEL\n5\t127407440\t127410918\tDEL\n5\t128314869\t128314870\tALU;TSD=AAGAAGTCACTTTTG\n5\t130853258\t130853259\tALU;TSD=AAAAAATCTCTCAAATG\n5\t132934098\t132934099\tLINE1;TSD=AAGAGGTGCTGGC\n5\t135115148\t135120700\tDEL\n5\t136851113\t136857394\tDEL\n5\t136854589\t136856557\tDEL\n5\t140554408\t140558942\tCNV\n5\t142935366\t142935678\tDEL_ALU\n5\t144059460\t144059732\tINV\n5\t146369626\t146369627\tALU;TSD=AAAACCATAAAACA\n5\t146380181\t146380256\tDEL\n5\t146622654\t146623087\tDEL\n5\t147462155\t147462471\tDEL_ALU\n5\t147552866\t147554617\tINV\n5\t148385841\t148385940\tDEL\n5\t148401433\t148401591\tDEL\n5\t150210002\t150210129\tDEL\n5\t150789783\t150792627\tDEL\n5\t151760910\t151761223\tDEL_ALU\n5\t152529738\t152529739\tALU;TSD=TCAACACAGTATTTTT\n5\t154315917\t154316002\tDEL\n5\t155290624\t155290625\tALU;TSD=AACAAAGAAAATTC\n5\t155311785\t155312580\tDEL\n5\t158592397\t158592742\tDEL_ALU\n5\t159742556\t159742662\tDEL\n5\t160431305\t160431636\tDEL_ALU\n5\t164366297\t164366607\tDEL_ALU\n5\t166294129\t166294321\tDEL\n5\t167299359\t167299582\tDEL\n5\t168394430\t168394743\tDEL_ALU\n5\t168742523\t168742757\tDEL_ALU\n5\t168911933\t168911934\tALU;TSD=AAAGAG\n5\t169597462\t169598751\tINV\n5\t170158817\t170158906\tDEL_ALU\n5\t171893746\t171893747\tALU;TSD=TCCCCAGATTTCT\n5\t172973014\t172974746\tDEL\n5\t175353978\t175371353\tDUP\n5\t177199170\t177205310\tDEL\n5\t177405751\t177406551\tDEL\n5\t180375655\t180420806\tCNV\n6\t256502\t293373\tCNV\n6\t305181\t340601\tCNV\n6\t327586\t368712\tCNV\n6\t380338\t380414\tDEL\n6\t666377\t667821\tDEL\n6\t1682791\t1683102\tDEL_ALU\n6\t2568176\t2571941\tDEL\n6\t2605520\t2605580\tDEL\n6\t2774017\t2774018\tALU;TSD=AAAGAATCAATTAT\n6\t4050241\t4050560\tDEL_ALU\n6\t5898451\t5898882\tDEL\n6\t6068837\t6069178\tDEL_ALU\n6\t6277340\t6277602\tDEL_ALU\n6\t7717367\t7717702\tDEL_ALU\n6\t8337673\t8341524\tDEL\n6\t9014816\t9014924\tDEL_ALU\n6\t9460377\t9460714\tDEL_ALU\n6\t10070792\t10071105\tDEL_ALU\n6\t10264425\t10265263\tDEL\n6\t10293995\t10294140\tDEL\n6\t11556091\t11556411\tDEL_ALU\n6\t11903436\t11903748\tDEL_ALU\n6\t13191033\t13191034\tLINE1;TSD=AGAATTCAAAATACAAGG\n6\t13882549\t13883852\tDEL\n6\t14745282\t14745689\tDEL\n6\t15666751\t15667661\tDEL\n6\t17376702\t17381506\tDEL\n6\t17416398\t17416399\tALU;TSD=GAGAAAACTCTTTT\n6\t17472269\t17472582\tDEL_ALU\n6\t18346399\t18346400\tALU;TSD=AGCTTAGGATTATT\n6\t18402112\t18402924\tDEL\n6\t18402131\t18402447\tDEL\n6\t18943635\t18943685\tDEL\n6\t19155631\t19155966\tDEL_ALU\n6\t20259856\t20259909\tDEL\n6\t20765366\t20765686\tDEL_ALU\n6\t22227472\t22227754\tDEL_ALU\n6\t23685987\t23686315\tDEL_ALU\n6\t23978361\t23978362\tALU;TSD=AAAAATGACAACCATGCC\n6\t24811806\t24818032\tDEL_LINE1\n6\t25529870\t25530011\tDEL_ALU\n6\t26678936\t26686491\tCNV\n6\t26739614\t26748928\tCNV\n6\t28190195\t28190532\tDEL_ALU\n6\t29363897\t29364040\tDEL_ALU\n6\t29843522\t29849190\tDEL\n6\t29899944\t29901525\tDEL\n6\t29998496\t29998497\tALU;TSD=AAAAAAACTTCTTTC\n6\t30207801\t30208224\tDEL\n6\t30230519\t30230591\tDEL\n6\t30886430\t30886570\tDEL\n6\t31292091\t31293878\tDEL\n6\t32313768\t32314091\tDEL_ALU\n6\t32454946\t32478407\tDEL\n6\t32461337\t32468848\tDEL\n6\t32494142\t32494484\tDEL\n6\t32499300\t32500806\tDEL\n6\t32512660\t32513019\tDEL\n6\t32514808\t32516265\tDEL\n6\t32571334\t32571609\tDEL_ALU\n6\t32604936\t32616132\tCNV\n6\t32614932\t32615252\tDEL\n6\t32623533\t32624604\tDEL\n6\t32624896\t32625863\tDEL\n6\t32676558\t32677026\tDEL\n6\t32778682\t32779821\tDEL\n6\t33026721\t33028605\tDEL\n6\t33030313\t33030314\tSVA;TSD=CTCTTTTTCTT\n6\t33093407\t33093738\tDEL_ALU\n6\t33583080\t33585984\tDEL\n6\t34699946\t34701100\tDEL\n6\t35626431\t35629746\tDEL\n6\t35649830\t35649911\tDEL\n6\t35754684\t35766728\tCNV\n6\t38071246\t38071300\tDEL\n6\t38498278\t38498415\tDEL\n6\t38922187\t38922502\tDEL_ALU\n6\t41953350\t41953665\tDEL_ALU\n6\t47312788\t47312789\tALU;TSD=AAATAAAGAGCCCCTGC\n6\t47564668\t47566948\tDEL\n6\t48286295\t48286349\tDEL\n6\t50765956\t50766267\tDEL_ALU\n6\t51300093\t51300094\tALU;TSD=AATAATTTATATTTTC\n6\t51517349\t51517675\tDEL_ALU\n6\t51736109\t51736805\tDEL\n6\t51929672\t51929673\tALU;TSD=null\n6\t52691458\t52691459\tALU;TSD=null\n6\t53648758\t53648759\tALU;TSD=AAAAGGCATATAAA\n6\t53928702\t53934820\tDEL\n6\t54556435\t54556770\tDEL_ALU\n6\t54846372\t54851449\tDEL\n6\t57268496\t57297686\tCNV\n6\t57450653\t57479094\tCNV\n6\t57733728\t57733824\tDEL\n6\t62924290\t62929121\tDEL\n6\t63597637\t63598983\tDEL\n6\t64666468\t64668402\tDEL\n6\t64667011\t64668349\tDEL\n6\t65006421\t65006515\tDEL\n6\t65710974\t65715701\tDEL\n6\t66163982\t66163983\tALU;TSD=CTATTTTTCATTTTTT\n6\t66260136\t66262101\tDEL\n6\t67009228\t67049033\tDEL\n6\t67024956\t67027285\tDEL\n6\t67040806\t67043182\tDEL\n6\t68311311\t68311312\tALU;TSD=TTTTTGCCAGTATTTT\n6\t68314068\t68314069\tALU;TSD=TGATTTGGTATATACATTT\n6\t70190684\t70192285\tDEL\n6\t72863591\t72873663\tDEL\n6\t73221994\t73222816\tDEL\n6\t74156152\t74156478\tDEL_ALU\n6\t74421253\t74421559\tDEL_ALU\n6\t74504855\t74504856\tALU;TSD=AAGATTTAGTTTTTCTGG\n6\t74591999\t74602382\tCNV\n6\t74613607\t74620405\tDEL\n6\t74832472\t74833461\tDEL\n6\t74932705\t74933071\tDEL\n6\t74932723\t74932945\tDEL\n6\t77097464\t77102643\tDEL\n6\t77437459\t77453275\tCNV\n6\t77449470\t77452760\tDEL\n6\t77980649\t77980650\tLINE1;TSD=null\n6\t79723801\t79723802\tALU;TSD=TACAAACCTTATTTCTT\n6\t80086769\t80086770\tALU;TSD=AAAGTCAAAGTTTTATTCTTTCTT\n6\t80609906\t80609977\tDEL\n6\t81283720\t81293577\tDEL\n6\t83094623\t83094675\tDEL\n6\t86026352\t86026667\tDEL_ALU\n6\t86144298\t86144632\tDEL_ALU\n6\t87678642\t87678643\tALU;TSD=TCACTTATGATTTTTT\n6\t88118173\t88118306\tDEL\n6\t88651308\t88651380\tDEL\n6\t88698077\t88698078\tALU;TSD=GGGCCCCTTTCTT\n6\t89921713\t89922144\tDEL\n6\t91125879\t91125880\tALU;TSD=CTAAAATATTATTGTGTAGTTATTCTT\n6\t91237575\t91237896\tDEL_ALU\n6\t94397505\t94397566\tDEL\n6\t94930783\t94930784\tALU;TSD=TCCAACTCTCTTTT\n6\t95193325\t95194337\tDEL\n6\t95335622\t95335927\tDEL_ALU\n6\t96009421\t96009422\tALU;TSD=ATGTCTACTTCTTTCT\n6\t97017683\t97017684\tALU;TSD=GTGAGTTTCTTTT\n6\t98251340\t98251341\tALU;TSD=TAGACCATTTCT\n6\t100034558\t100035368\tDEL\n6\t104183184\t104183509\tDEL_ALU\n6\t105567837\t105568172\tDEL_ALU\n6\t106983622\t106983941\tDEL_ALU\n6\t108266112\t108266415\tDEL_ALU\n6\t110102982\t110102983\tALU;TSD=AGATTT\n6\t114223973\t114225052\tDEL\n6\t116844156\t116844157\tALU;TSD=AAAATGTGGATTGCTG\n6\t118626162\t118626163\tALU;TSD=AGTCAAAGATCTTT\n6\t120380266\t120380267\tALU;TSD=CCCTGCTCTTGTT\n6\t121319292\t121319616\tDEL_ALU\n6\t122301643\t122301962\tDEL_ALU\n6\t123515058\t123515373\tDEL_ALU\n6\t124498906\t124499229\tDEL_ALU\n6\t125421421\t125421422\tALU;TSD=AAAAAAAA\n6\t126468009\t126468247\tDEL\n6\t129737070\t129737384\tDEL_ALU\n6\t131113279\t131113280\tALU;TSD=AAAATCTCAAGGCC\n6\t131273499\t131273500\tALU;TSD=AAAATGTTCACTAAAG\n6\t131418012\t131418980\tDEL\n6\t132697628\t132697951\tDEL_ALU\n6\t132707465\t132712439\tDEL\n6\t133371487\t133371831\tDEL_ALU\n6\t134268952\t134269719\tDEL\n6\t137313691\t137314188\tDEL\n6\t141325707\t141326033\tDEL_ALU\n6\t141548586\t141550030\tDEL\n6\t145818662\t145818760\tDEL\n6\t148506314\t148506448\tDEL\n6\t149632778\t149632944\tDEL\n6\t151485895\t151486930\tDEL\n6\t153408248\t153408307\tDEL\n6\t153429856\t153429857\tSVA;TSD=AGAAAATTCCCCTACATTCC\n6\t153633385\t153633386\tALU;TSD=TTTTTCTCTGCCTTCT\n6\t154446915\t154447237\tDEL_ALU\n6\t154463239\t154463330\tDEL\n6\t154686517\t154686793\tDEL_ALU\n6\t154882352\t154882470\tDEL\n6\t158548266\t158549066\tDEL_SVA\n6\t158876076\t158876404\tDEL_ALU\n6\t159204431\t159204432\tALU;TSD=AAAAAGTTTCCT\n6\t160086252\t160088699\tDEL\n6\t161274256\t161274633\tDEL\n6\t161684136\t161684238\tDEL\n6\t162583796\t162586803\tDEL\n6\t162852220\t162852293\tDEL\n6\t163814230\t163814231\tALU;TSD=AAAAGATGAGGTCTC\n6\t165186931\t165186932\tALU;TSD=TC\n6\t167928592\t167928701\tDEL\n6\t170038118\t170038445\tDEL_ALU\n6\t170206128\t170206410\tDEL\n6\t170465430\t170465493\tDEL\n6\t170500768\t170500769\tALU;TSD=CAACAATAAAATATTC\n7\t904330\t904386\tDEL\n7\t1185070\t1187665\tDEL\n7\t1898671\t1898738\tDEL\n7\t4158162\t4160313\tDEL\n7\t7583520\t7584968\tDEL\n7\t8463553\t8465548\tDEL\n7\t8698628\t8698847\tDEL\n7\t10504231\t10506240\tDEL\n7\t10834757\t10834879\tDEL\n7\t13649223\t13649224\tALU;TSD=CTATATCAGACCTCTT\n7\t13663189\t13663455\tDEL_ALU\n7\t14451264\t14451430\tDEL\n7\t14680853\t14680933\tDEL\n7\t14910419\t14910737\tDEL_ALU\n7\t16171771\t16174073\tDEL\n7\t16936287\t16936626\tDEL_ALU\n7\t17969699\t17969765\tDEL\n7\t22434787\t22436761\tDEL\n7\t24038171\t24040063\tDEL\n7\t25044601\t25044930\tDEL_ALU\n7\t28214282\t28214660\tDEL\n7\t28574294\t28575147\tDEL\n7\t29476917\t29477227\tDEL_ALU\n7\t32286850\t32287119\tDEL\n7\t32811206\t32811259\tDEL\n7\t33712013\t33712074\tDEL\n7\t33898841\t33899172\tDEL_ALU\n7\t34492801\t34492802\tALU;TSD=AGAATTCTAGGGCT\n7\t36878879\t36878968\tDEL\n7\t37836651\t37836652\tALU;TSD=TGCTCCCCTCTCTTT\n7\t38116201\t38116202\tALU;TSD=CTTTGTCTTATTTTT\n7\t39380342\t39380407\tDEL\n7\t39387270\t39387889\tDEL\n7\t40879271\t40880479\tINV\n7\t42549700\t42550022\tDEL_ALU\n7\t47089458\t47092817\tDEL\n7\t47219078\t47219174\tDEL\n7\t47551089\t47551090\tALU;TSD=CTTAAATATTTTA\n7\t49057624\t49057625\tALU;TSD=GCCTGTAGCTTGGTTCT\n7\t49725896\t49725897\tLINE1;TSD=null\n7\t50104763\t50106067\tDEL\n7\t51081675\t51081733\tDEL\n7\t51594315\t51598689\tDEL\n7\t52094962\t52095275\tDEL_ALU\n7\t52107107\t52107424\tDEL_ALU\n7\t52520168\t52520372\tDEL\n7\t53652516\t53652517\tLINE1;TSD=TTATTTGTTTTTTTA\n7\t56244918\t56244919\tALU;TSD=AAAAGTAATCATCAC\n7\t56435784\t56438107\tDEL\n7\t57164992\t57173720\tDEL\n7\t57957715\t57959407\tDEL\n7\t61510866\t61515334\tDEL\n7\t61971096\t61975635\tDEL\n7\t62002293\t62004875\tDEL\n7\t62366086\t62369684\tDEL\n7\t64413378\t64414031\tDEL\n7\t65589712\t65591959\tDEL\n7\t66755275\t66756602\tDEL\n7\t67113327\t67113452\tDEL\n7\t68462070\t68462389\tDEL_ALU\n7\t70188702\t70188703\tLINE1;TSD=GTAGCTCTGCTCTTATTTATGTATTTT\n7\t71211920\t71212966\tDEL\n7\t72270263\t72275846\tDEL\n7\t73549765\t73550955\tDEL\n7\t73828493\t73831271\tDEL\n7\t74772350\t74774220\tDEL\n7\t76144788\t76157013\tCNV\n7\t76567224\t76567225\tALU;TSD=TGGCTATTTCTT\n7\t76702227\t76708169\tDEL\n7\t76870544\t76870797\tDEL\n7\t79742076\t79742408\tDEL_ALU\n7\t81358341\t81358609\tDEL\n7\t81728727\t81729064\tDEL_ALU\n7\t83050175\t83051201\tDEL\n7\t84901725\t84901726\tLINE1;TSD=TT\n7\t88091299\t88091749\tDEL_LINE1\n7\t89598872\t89599188\tDEL_ALU\n7\t90022137\t90022454\tDEL_ALU\n7\t90583932\t90584239\tDEL_ALU\n7\t91214111\t91220934\tDEL\n7\t93416961\t93422984\tDEL_LINE1\n7\t93541824\t93542540\tDEL\n7\t94877512\t94877513\tALU;TSD=TAAAAATATATTTT\n7\t95386253\t95386584\tDEL_ALU\n7\t96067512\t96067827\tDEL_ALU\n7\t96543286\t96546589\tDEL\n7\t99146666\t99146667\tALU;TSD=GCCTGG\n7\t100327576\t100340737\tDEL\n7\t101059153\t101060267\tDEL\n7\t101334195\t101334515\tDEL_ALU\n7\t102366705\t102374343\tDEL\n7\t103874937\t103875244\tDEL_ALU\n7\t104129515\t104129796\tDEL_ALU\n7\t104187384\t104187715\tDEL_ALU\n7\t104204602\t104204768\tDEL\n7\t107464069\t107464744\tDEL\n7\t107818074\t107818166\tDEL\n7\t107829263\t107829264\tLINE1;TSD=TAAATTTTAGTGGAA\n7\t108352846\t108353171\tDEL_ALU\n7\t108501444\t108501545\tDEL\n7\t109283352\t109283353\tALU;TSD=AAAAGACCATTAGT\n7\t109436701\t109453942\tDEL\n7\t110181927\t110188432\tDEL\n7\t110484750\t110484751\tLINE1;TSD=null\n7\t111065333\t111067265\tDEL\n7\t114956601\t114956602\tALU;TSD=GTAAAATGACTTTT\n7\t118083314\t118083315\tALU;TSD=AAAAATAATTCCT\n7\t118831254\t118834745\tDEL\n7\t119558047\t119558048\tALU;TSD=TTCTATGTATAT\n7\t126045887\t126051450\tDEL\n7\t126775610\t126775700\tDEL_ALU\n7\t127766414\t127766728\tDEL_ALU\n7\t127929333\t127929334\tALU;TSD=ATGGCCACTATTCTT\n7\t129157179\t129157180\tALU;TSD=AGAAAGTGGGAGAGAAGG\n7\t133785003\t133798330\tDEL\n7\t134424656\t134424657\tALU;TSD=CATAATTTTATTCTT\n7\t138322188\t138322252\tDEL\n7\t138742268\t138742585\tDEL_ALU\n7\t140189249\t140190276\tDEL\n7\t141113863\t141114182\tDEL_ALU\n7\t143543598\t143560593\tCNV\n7\t144382749\t144382897\tDEL\n7\t144770375\t144775211\tDEL\n7\t145063221\t145063384\tDEL_LINE1\n7\t148063001\t148063081\tDEL\n7\t148072910\t148076327\tDEL\n7\t148818174\t148818486\tDEL_ALU\n7\t149847612\t149849125\tDEL\n7\t152245349\t152246306\tDEL\n7\t152419399\t152419715\tDEL_ALU\n7\t152574795\t152580352\tDEL\n7\t152708457\t152708846\tDEL\n7\t153310127\t153310817\tDEL\n7\t153529763\t153529833\tDEL\n7\t153966050\t153966051\tALU;TSD=AAAAATGCCCATCT\n7\t154858220\t154858221\tALU;TSD=GTAACATAAGCTTT\n7\t154941915\t154942244\tDEL_ALU\n7\t155139370\t155140881\tDEL\n7\t155140316\t155141440\tDEL\n7\t155652238\t155652328\tDEL\n7\t157734829\t157734885\tDEL\n7\t157825833\t157825892\tDEL\n7\t158029473\t158030453\tDEL\n7\t158046568\t158047317\tDEL\n7\t158500754\t158504852\tDEL\n8\t594395\t599417\tDEL\n8\t597104\t598344\tDEL\n8\t1071684\t1071746\tDEL\n8\t1836099\t1838287\tDEL\n8\t2122088\t2122354\tDEL\n8\t2132773\t2270819\tCNV\n8\t2250563\t2266528\tDEL\n8\t2778563\t2778787\tDEL\n8\t3994862\t3995320\tDEL\n8\t4122887\t4124965\tDEL\n8\t4222049\t4222389\tDEL_ALU\n8\t4941223\t4941520\tDEL_ALU\n8\t5748176\t5748505\tDEL_ALU\n8\t5829282\t5829283\tLINE1;TSD=GTTTTCT\n8\t6587829\t6588150\tDEL_ALU\n8\t6991759\t6995386\tCNV\n8\t7212582\t7227421\tCNV\n8\t7355293\t7364762\tDEL\n8\t7774146\t7782327\tCNV\n8\t8072609\t8077628\tCNV\n8\t8245067\t8245143\tDEL\n8\t8920127\t8920128\tALU;TSD=AAGAAGGGGACGG\n8\t9665673\t9665674\tALU;TSD=AGAAGATCTTCACTGGC\n8\t9807901\t9807902\tALU;TSD=AAAAGAGTCTG\n8\t11245530\t11247217\tDEL\n8\t12389850\t12428478\tCNV\n8\t13594464\t13594628\tDEL_ALU\n8\t13778059\t13778385\tDEL_ALU\n8\t15001266\t15001586\tDEL_ALU\n8\t15053390\t15053705\tDEL_ALU\n8\t15387290\t15387593\tDEL_ALU\n8\t15401664\t15414791\tDEL\n8\t16102822\t16102823\tALU;TSD=CATATTATGGATTCTT\n8\t16821865\t16822240\tDEL\n8\t16984984\t16985045\tDEL\n8\t23447840\t23447890\tDEL\n8\t24972437\t24990950\tDEL\n8\t25066682\t25070659\tDEL\n8\t25172660\t25172661\tALU;TSD=ATATTAAAATTCTT\n8\t25327221\t25327278\tDEL\n8\t26073403\t26073404\tALU;TSD=CAAATCCCCATCATCTT\n8\t30392277\t30392581\tDEL_ALU\n8\t31571241\t31571594\tDEL_ALU\n8\t32679960\t32691259\tDEL\n8\t34022524\t34022805\tDEL\n8\t34166427\t34166495\tDEL\n8\t34947383\t34947457\tDEL\n8\t37050879\t37051853\tDEL\n8\t38864077\t38864078\tALU;TSD=AAAAAGGTATCATAGTC\n8\t39195825\t39389230\tDEL\n8\t39232005\t39287823\tDEL\n8\t39303973\t39308306\tDEL\n8\t39306887\t39312031\tDEL\n8\t39311276\t39321581\tDEL\n8\t39737280\t39737510\tDEL\n8\t39765314\t39765646\tDEL_ALU\n8\t39976061\t39976151\tDEL\n8\t40469706\t40470386\tDEL\n8\t40774597\t40779782\tDEL\n8\t41270468\t41270469\tALU;TSD=GACACATTTT\n8\t41279328\t41279651\tDEL_ALU\n8\t42190387\t42194352\tDEL\n8\t46991405\t46992654\tDEL\n8\t46991586\t46992440\tDEL\n8\t47405849\t47407908\tDEL\n8\t49045494\t49045495\tALU;TSD=TTTAATAAAGTTTT\n8\t52737961\t52738284\tDEL_ALU\n8\t53895704\t53897189\tDEL\n8\t54204882\t54205198\tDEL_ALU\n8\t56401202\t56401518\tDEL_ALU\n8\t56658598\t56658734\tDEL\n8\t56676277\t56676407\tDEL\n8\t59078452\t59078788\tDEL_ALU\n8\t61204986\t61205303\tDEL_ALU\n8\t61945872\t61946021\tDEL\n8\t62169158\t62169209\tDEL\n8\t62930143\t62930455\tDEL_ALU\n8\t63034973\t63040435\tDEL\n8\t64144864\t64145115\tDEL_ALU\n8\t66311348\t66311469\tDEL\n8\t70357613\t70357926\tDEL_ALU\n8\t71914591\t71914592\tALU;TSD=AAAATAAAAGCTA\n8\t72551405\t72551739\tDEL_ALU\n8\t74607596\t74607683\tDEL\n8\t74787761\t74787858\tDEL\n8\t74833794\t74837515\tDEL\n8\t75362835\t75366959\tDEL\n8\t75375346\t75375347\tALU;TSD=AAGATTGATCCTC\n8\t76126888\t76127212\tDEL_ALU\n8\t76138134\t76138191\tDEL\n8\t81767595\t81767596\tALU;TSD=AAAAAATCTTTGCTT\n8\t83351478\t83351479\tALU;TSD=AAGAGTAAAAAGGTGG\n8\t84296948\t84297096\tDEL_ALU\n8\t84349766\t84349839\tDEL\n8\t84959372\t84959555\tDEL\n8\t85437274\t85437275\tALU;TSD=CGGCCTCAATTTT\n8\t87315040\t87315041\tLINE1;TSD=null\n8\t89392207\t89392514\tDEL_ALU\n8\t91069173\t91069495\tDEL_ALU\n8\t92677086\t92677087\tALU;TSD=AAAAAAATTAAAATA\n8\t96345249\t96345387\tDEL\n8\t97098073\t97098425\tDEL_ALU\n8\t98595392\t98595731\tDEL_ALU\n8\t98783448\t98783780\tDEL_ALU\n8\t100782579\t100782580\tALU;TSD=null\n8\t105900483\t105900484\tALU;TSD=ATATACTTGATTTCCT\n8\t106664522\t106664523\tALU;TSD=AGCCCATTTTT\n8\t106670518\t106670838\tDEL_ALU\n8\t106703448\t106703774\tDEL_ALU\n8\t107207888\t107207889\tALU;TSD=GACACTTTTT\n8\t107511093\t107511418\tDEL_ALU\n8\t108120234\t108120557\tDEL_ALU\n8\t109135936\t109135937\tSVA;TSD=AAAAGAATATTTATG\n8\t112294057\t112297142\tDEL\n8\t113225848\t113226191\tDEL_ALU\n8\t114862620\t114862753\tDEL\n8\t114934391\t114934683\tDEL\n8\t115079316\t115080675\tDEL\n8\t117047019\t117047020\tALU;TSD=AATAAAGACATAACCAA\n8\t118223529\t118223809\tDEL_ALU\n8\t118712788\t118713119\tDEL_ALU\n8\t119165526\t119165598\tDEL\n8\t119447044\t119447355\tDEL_ALU\n8\t121681672\t121681991\tDEL_ALU\n8\t121854760\t121855078\tDEL_ALU\n8\t121930605\t121930713\tDEL\n8\t124680183\t124680184\tALU;TSD=AAAAGAACTCAGGT\n8\t125889970\t125889971\tALU;TSD=TTCTTCTGATCTT\n8\t127192196\t127194569\tDEL\n8\t129244941\t129244942\tALU;TSD=TCCTTTCTCTTTT\n8\t129708036\t129708037\tALU;TSD=AAAAAAAAAATCTGTGCC\n8\t132168283\t132168596\tDEL_ALU\n8\t132277657\t132280535\tDEL\n8\t137160271\t137163814\tCNV\n8\t138742943\t138743864\tDEL\n8\t138743347\t138743803\tDEL\n8\t138860548\t138860872\tDEL_ALU\n8\t139325979\t139325980\tALU;TSD=AAGATACAAGCTAC\n8\t140014070\t140014187\tDEL\n8\t143494784\t143495714\tDEL\n8\t145234823\t145234878\tDEL\n8\t145503113\t145503195\tDEL\n8\t145645595\t145647589\tDEL\n8\t146042931\t146043066\tDEL\n8\t146057037\t146057833\tDEL\n8\t146192869\t146193180\tDEL\n9\t3780616\t3780942\tDEL_ALU\n9\t4346658\t4346969\tDEL_ALU\n9\t6700382\t6709249\tCNV\n9\t6701890\t6702631\tDEL\n9\t6708608\t6710744\tDEL\n9\t6999377\t6999684\tDEL_ALU\n9\t7371803\t7372116\tDEL_ALU\n9\t9950428\t9950758\tDEL_ALU\n9\t10404415\t10405176\tDEL\n9\t10404562\t10405091\tDEL\n9\t10498740\t10499050\tDEL_ALU\n9\t10828091\t10828426\tDEL_ALU\n9\t10908809\t10909099\tDEL_ALU\n9\t11329329\t11329330\tALU;TSD=CAGATATTAATTTCTT\n9\t14877445\t14877446\tALU;TSD=TGTTGTTTCTTT\n9\t15394880\t15395196\tDEL_ALU\n9\t15602580\t15602666\tDEL\n9\t15815277\t15821947\tDEL\n9\t17874425\t17874426\tALU;TSD=null\n9\t18751826\t18752116\tDEL_ALU\n9\t21038453\t21038454\tALU;TSD=null\n9\t21109534\t21109535\tALU;TSD=GAAAAATATAT\n9\t21261949\t21261950\tALU;TSD=AAAAAATGGT\n9\t22288724\t22288725\tALU;TSD=GCCTGTGTTTCCTTTCT\n9\t22999487\t22999819\tDEL_ALU\n9\t23362812\t23377678\tDEL\n9\t23370987\t23372431\tDEL\n9\t28584919\t28585011\tDEL_ALU\n9\t28846309\t28847978\tDEL\n9\t28960619\t28960620\tALU;TSD=AAGAAATATGTATAATTG\n9\t29624691\t29625012\tDEL_ALU\n9\t30491283\t30491594\tDEL_ALU\n9\t30674468\t30674469\tLINE1;TSD=CAACCAAGACAGTAAATTTTTTTTTT\n9\t31291353\t31292673\tDEL\n9\t32092742\t32092743\tLINE1;TSD=TT\n9\t33213068\t33213929\tDEL\n9\t33213125\t33213403\tDEL\n9\t36362880\t36364079\tDEL\n9\t36474157\t36474999\tDEL\n9\t38555824\t38565194\tDEL\n9\t40609334\t40609335\tALU;TSD=AGAAAATGCCAGGATG\n9\t43392405\t43404180\tCNV\n9\t43450178\t43463455\tCNV\n9\t43495449\t43520900\tCNV\n9\t43580844\t43606160\tCNV\n9\t43612172\t43623150\tCNV\n9\t43652217\t43676146\tCNV\n9\t44235869\t44252311\tCNV\n9\t44255190\t44276471\tCNV\n9\t45700960\t45715411\tCNV\n9\t66478618\t66478619\tALU;TSD=null\n9\t66497883\t66537264\tCNV\n9\t68354131\t68388436\tCNV\n9\t69794966\t69839048\tCNV\n9\t71665323\t71665557\tDEL_ALU\n9\t71738119\t71743359\tDEL\n9\t71777926\t71778244\tDEL_ALU\n9\t71804520\t71804997\tDEL\n9\t71895338\t71896537\tDEL\n9\t73463597\t73463913\tDEL_ALU\n9\t74544792\t74544793\tALU;TSD=AAACTTAAAGATATCT\n9\t75669517\t75669796\tDEL_ALU\n9\t77524150\t77524337\tDEL\n9\t78736726\t78737038\tDEL_ALU\n9\t78895792\t78895793\tALU;TSD=AAAAAAGAGA\n9\t83630437\t83630750\tDEL_ALU\n9\t85033845\t85034187\tDEL_ALU\n9\t87775183\t87776183\tDEL\n9\t87901405\t87901712\tDEL_ALU\n9\t89154576\t89155912\tDEL\n9\t89799093\t89799407\tDEL_ALU\n9\t91501994\t91502058\tDEL\n9\t92176048\t92177979\tDEL\n9\t95884696\t95884756\tDEL\n9\t96371386\t96371387\tALU;TSD=TTAGTGGTTGTTTT\n9\t96730345\t96730597\tDEL_ALU\n9\t97292906\t97293231\tDEL_ALU\n9\t97314256\t97314257\tALU;TSD=AAAAGAGAGCTCAAC\n9\t99062582\t99062920\tDEL\n9\t100761058\t100761388\tDEL_ALU\n9\t101309042\t101311668\tDEL\n9\t101347967\t101348322\tDEL\n9\t102849310\t102849311\tALU;TSD=AAATAAAAAAAAAAACTTTG\n9\t104219699\t104220378\tDEL\n9\t104443961\t104444727\tDEL_LINE1\n9\t105162485\t105162668\tDEL\n9\t107708696\t107708761\tDEL\n9\t107798567\t107803487\tDEL\n9\t107816812\t107817348\tINV\n9\t109675911\t109676565\tDEL\n9\t112430200\t112430515\tDEL_ALU\n9\t113327089\t113327090\tALU;TSD=AGAAGATTAATTATCTG\n9\t114333161\t114333923\tDEL\n9\t114653182\t114653934\tDEL\n9\t115937084\t115937379\tDEL_ALU\n9\t118109642\t118109987\tDEL_ALU\n9\t118509752\t118509753\tALU;TSD=CCCTATGGCCTCATTTAACCTT\n9\t119477063\t119477397\tDEL_ALU\n9\t121371514\t121371569\tDEL\n9\t122531834\t122532152\tDEL_ALU\n9\t123055184\t123055185\tALU;TSD=TCCTTTACTTTGTT\n9\t124411470\t124411788\tDEL\n9\t124642001\t124642134\tDEL\n9\t128980176\t128980177\tALU;TSD=AAGAATCTCTCACCTT\n9\t131412056\t131413976\tDEL\n9\t134391120\t134391175\tDEL\n9\t135296997\t135297073\tDEL\n9\t135938579\t135956026\tCNV\n9\t136379210\t136379552\tDEL_ALU\n9\t136414101\t136414425\tDEL_ALU\n9\t136761039\t136761267\tDEL_SVA\n9\t138214060\t138217603\tDEL\n9\t138479100\t138480204\tDEL\n9\t138562333\t138562389\tDEL\n9\t140253527\t140255973\tDEL\n10\t1292107\t1292108\tALU;TSD=AAAAATCCTATTGAAGG\n10\t1537791\t1537898\tDEL\n10\t2077560\t2077561\tALU;TSD=AGAAATTTCAGCATTTTA\n10\t3083763\t3083764\tSVA;TSD=AAATGAAAAATGGT\n10\t3569025\t3569026\tALU;TSD=AAAAATTCTGTGAACTT\n10\t4290058\t4291690\tDEL\n10\t4634801\t4635120\tDEL_ALU\n10\t4708523\t4710520\tDEL\n10\t6064768\t6064841\tDEL\n10\t6097370\t6097868\tDEL_SVA\n10\t7077041\t7078303\tDEL\n10\t7995834\t7996925\tDEL\n10\t9097749\t9097799\tDEL\n10\t9436189\t9436251\tDEL\n10\t9474855\t9474856\tALU;TSD=TATTTTTTT\n10\t9510994\t9510995\tALU;TSD=TGCAAATTTTTTT\n10\t10075348\t10075398\tDEL\n10\t10493409\t10493732\tDEL_ALU\n10\t12596183\t12596570\tDEL\n10\t14936348\t14936665\tDEL_ALU\n10\t15532464\t15532774\tDEL_ALU\n10\t18503073\t18503589\tDEL\n10\t19216666\t19216667\tLINE1;TSD=AAGAAGTGAGACATA\n10\t19397308\t19397645\tDEL_ALU\n10\t19504645\t19504784\tDEL\n10\t19996544\t19998179\tDEL\n10\t20667245\t20667565\tDEL_ALU\n10\t23635492\t23635621\tDEL\n10\t24376838\t24378445\tDEL\n10\t25707715\t25707716\tLINE1;TSD=GAAAATAATCTTTTGTTTGACTTATTTTT\n10\t26185093\t26185161\tDEL\n10\t26354751\t26355068\tDEL_ALU\n10\t26767941\t26768247\tDEL_ALU\n10\t26999005\t27002143\tDEL\n10\t27224091\t27228168\tDEL\n10\t27638254\t27642097\tDEL\n10\t29102541\t29102542\tALU;TSD=CTAAATCATCTATT\n10\t29712145\t29712720\tDEL_LINE1\n10\t29883209\t29883264\tDEL\n10\t29918527\t29918997\tDEL\n10\t32705726\t32706064\tDEL_ALU\n10\t34684468\t34684793\tDEL_ALU\n10\t35593206\t35593536\tDEL_ALU\n10\t46262157\t46305352\tCNV\n10\t46551272\t46693058\tCNV\n10\t46976292\t47023561\tCNV\n10\t47007970\t47086710\tCNV\n10\t47089972\t47150813\tCNV\n10\t47383857\t47395064\tCNV\n10\t47531022\t47599037\tCNV\n10\t47596038\t47634490\tCNV\n10\t47645964\t47697149\tCNV\n10\t47894775\t47999751\tCNV\n10\t48419952\t48419953\tALU;TSD=ATAAAATTT\n10\t48751829\t48880554\tCNV\n10\t49289919\t49390675\tCNV\n10\t49917156\t49917479\tDEL_ALU\n10\t50278015\t50278332\tDEL_ALU\n10\t51003249\t51011181\tDEL\n10\t51300882\t51397654\tCNV\n10\t51600129\t51694240\tCNV\n10\t54466942\t54466943\tALU;TSD=AAAAGTGTCCTTTC\n10\t54805970\t54805971\tALU;TSD=CACTTTCAAGAATTT\n10\t54860810\t54861129\tDEL_ALU\n10\t55983295\t55983296\tALU;TSD=ACTTTTCCTTCTTTT\n10\t56664659\t56664660\tALU;TSD=AAAAAAAACAAAAAGG\n10\t57702025\t57702365\tDEL_ALU\n10\t57974632\t57974633\tALU;TSD=AATAAGAATTTTTTT\n10\t59256852\t59258100\tDEL\n10\t60984921\t60984922\tALU;TSD=AAGAAATGAAAATAGAGG\n10\t61365481\t61365800\tDEL_ALU\n10\t62124858\t62124859\tALU;TSD=AAAAAATAGATGCT\n10\t63743614\t63743792\tDEL_ALU\n10\t65509251\t65511405\tDEL\n10\t66837069\t66837070\tALU;TSD=TCAATGAGTTTTTTT\n10\t67306908\t67315294\tDEL\n10\t68336769\t68336770\tALU;TSD=CTTAACTTTTT\n10\t70234960\t70234961\tSVA;TSD=TTTTTGTTTGTTT\n10\t70272096\t70272418\tDEL_ALU\n10\t71314957\t71315065\tDEL\n10\t73256581\t73256701\tDEL\n10\t78255575\t78261021\tDEL\n10\t78800902\t78801221\tDEL_ALU\n10\t81188158\t81188234\tDEL\n10\t82904660\t82904914\tDEL\n10\t84237972\t84238465\tDEL_SVA\n10\t84400756\t84400905\tDEL_ALU\n10\t85522725\t85523932\tDEL\n10\t85626217\t85626424\tDEL_ALU\n10\t88666175\t88666515\tDEL_ALU\n10\t89079429\t89114090\tCNV\n10\t91547384\t91547720\tDEL_ALU\n10\t91809911\t91810221\tDEL_ALU\n10\t92969225\t92969563\tDEL_ALU\n10\t93633333\t93634563\tDEL\n10\t94134432\t94137766\tDEL\n10\t95545481\t95546492\tDEL\n10\t96251541\t96251717\tDEL\n10\t99034741\t99037238\tDEL\n10\t100025125\t100025464\tDEL\n10\t103394011\t103395092\tDEL\n10\t105817214\t105817215\tALU;TSD=AAAAGATTGCCTCCTTC\n10\t106566893\t106566894\tALU;TSD=GGACTGTTGCTTTT\n10\t107252997\t107253348\tDEL\n10\t107891561\t107891562\tALU;TSD=GGAGCACACGTTTTT\n10\t107950652\t107951600\tDEL\n10\t108991284\t108991285\tALU;TSD=GCATATTACACATTTT\n10\t112177753\t112177754\tLINE1;TSD=null\n10\t114073874\t114073875\tALU;TSD=AAACAGAAATAAAATATTGAGTTTCTG\n10\t114112179\t114116659\tDEL\n10\t114157784\t114158122\tDEL_ALU\n10\t117711613\t117711999\tDEL\n10\t119219112\t119219450\tDEL_ALU\n10\t119634274\t119634605\tDEL_ALU\n10\t121046814\t121046865\tDEL\n10\t122226691\t122228857\tDEL\n10\t122701143\t122701437\tDEL\n10\t124216824\t124217266\tDEL\n10\t127190584\t127197225\tINV\n10\t128106472\t128106786\tDEL_ALU\n10\t128616069\t128616070\tALU;TSD=null\n10\t129373595\t129373596\tALU;TSD=GGGAATAACCTTTT\n10\t129565302\t129565608\tDEL_ALU\n10\t132372179\t132372324\tDEL\n10\t132858471\t132858820\tDEL_ALU\n10\t132988697\t132991196\tDEL\n10\t134136386\t134364854\tDUP\n10\t134151810\t134179753\tDUP\n10\t134183629\t134212401\tDUP\n10\t134217496\t134217548\tDEL\n10\t134265395\t134300021\tDUP\n10\t134317241\t134362349\tDUP\n11\t677313\t677769\tDEL\n11\t4907963\t4907964\tALU;TSD=AAAAGACTTTATTTTT\n11\t4968456\t4975835\tCNV\n11\t4972926\t4973837\tDEL\n11\t5106964\t5107211\tDEL_ALU\n11\t5521609\t5523196\tDEL\n11\t5885149\t5885150\tALU;TSD=AAGAGATTGTGTG\n11\t6881402\t6881922\tDEL\n11\t7092800\t7092801\tALU;TSD=AAGAATGCAGGT\n11\t7428579\t7428910\tDEL_ALU\n11\t7716903\t7717219\tDEL_ALU\n11\t8326057\t8326195\tDEL_ALU\n11\t8839663\t8839664\tSVA;TSD=AAAAATACACAAACTAG\n11\t9323626\t9324639\tDEL\n11\t10292738\t10293842\tDEL\n11\t11948525\t11948526\tSVA;TSD=CAAGAGTGTGTTGTTTA\n11\t12152544\t12152868\tDEL_ALU\n11\t12943732\t12944009\tDEL_ALU\n11\t13092200\t13092201\tALU;TSD=ATTAATGTAATTTTC\n11\t14348310\t14348626\tDEL_ALU\n11\t16587158\t16587294\tDEL_LINE1\n11\t16597563\t16597886\tDEL_ALU\n11\t16996173\t16996599\tDEL\n11\t19963012\t19963013\tALU;TSD=AATAAATAGCATGAGGTTG\n11\t22412812\t22412813\tALU;TSD=AAAAACATCTA\n11\t22433876\t22433992\tDEL\n11\t23012584\t23012637\tDEL\n11\t23313949\t23314025\tDEL\n11\t23522804\t23522805\tALU;TSD=AATTGTAATTCATT\n11\t25068857\t25068962\tDEL\n11\t25605138\t25605139\tALU;TSD=AAAAGGAACTTAGTT\n11\t25680026\t25680080\tDEL\n11\t26679948\t26680047\tDEL\n11\t27657262\t27657596\tDEL\n11\t29007143\t29012766\tDEL\n11\t29139370\t29140327\tDEL\n11\t29967582\t29968470\tDEL\n11\t31393768\t31397650\tDEL\n11\t32286640\t32286973\tDEL_ALU\n11\t37121329\t37121391\tDEL\n11\t37544637\t37544638\tALU;TSD=AAAAATTTTGCTAATTA\n11\t37666630\t37666937\tDEL_ALU\n11\t37706295\t37706296\tALU;TSD=null\n11\t37962045\t37962370\tDEL_ALU\n11\t38801075\t38801076\tALU;TSD=AGAAAGTGGTTTATT\n11\t41007018\t41007340\tDEL_ALU\n11\t42464098\t42464409\tDEL_ALU\n11\t42812829\t42818734\tCNV\n11\t43191343\t43191344\tALU;TSD=AAAGAATAATGTT\n11\t43891829\t43892165\tDEL_ALU\n11\t43909603\t43909911\tDEL\n11\t45429848\t45431615\tDEL\n11\t46036235\t46036582\tDEL_ALU\n11\t46161016\t46162403\tDEL\n11\t47057588\t47063700\tDEL\n11\t47579086\t47579087\tALU;TSD=null\n11\t48120061\t48120370\tDEL_ALU\n11\t48600857\t48604286\tDEL\n11\t48680194\t48680405\tDEL\n11\t48714039\t48715072\tDEL\n11\t48734744\t48736963\tDEL\n11\t48880634\t48881844\tDEL\n11\t48928943\t48929253\tDEL\n11\t48933125\t48933126\tALU;TSD=CTTCAGTCTAGATTTT\n11\t49282683\t49282684\tALU;TSD=AATTTACATATCTTC\n11\t49425081\t49425416\tDEL_ALU\n11\t49655824\t49655825\tALU;TSD=CAGGTGTGTGTTCTT\n11\t49883571\t49883575\tINS\n11\t50234630\t50234680\tDEL\n11\t50640269\t50641124\tDEL\n11\t51341174\t51362976\tDEL\n11\t51346696\t51348982\tDEL\n11\t51353224\t51367675\tCNV\n11\t51577840\t51581765\tDEL\n11\t54885396\t54892290\tDEL\n11\t56303363\t56303364\tALU;TSD=AAATAAAAACTTTTACTATAG\n11\t58166965\t58168146\tDEL\n11\t61107785\t61108124\tDEL_ALU\n11\t61944785\t61945082\tDEL\n11\t64268439\t64268499\tDEL\n11\t65984338\t65984339\tALU;TSD=GTGGAGACTTCTT\n11\t66711479\t66713552\tDEL\n11\t67599059\t67599060\tLINE1;TSD=AATAAAGAACTGAG\n11\t68067241\t68069163\tDEL\n11\t68183089\t68183404\tDEL\n11\t69400834\t69401399\tDEL\n11\t69548392\t69548393\tALU;TSD=null\n11\t71861597\t71861912\tDEL_ALU\n11\t74024854\t74027358\tDEL\n11\t74145057\t74145404\tDEL_ALU\n11\t81556171\t81556538\tDEL_ALU\n11\t82132213\t82132582\tDEL\n11\t85542984\t85542985\tALU;TSD=CATGCTGGCTTATTTTT\n11\t87918544\t87918861\tDEL_ALU\n11\t88964484\t88967933\tDEL\n11\t89932513\t89932852\tDEL_ALU\n11\t90193711\t90196000\tDEL\n11\t92608491\t92608492\tALU;TSD=AAGATCCTAGACAG\n11\t92771855\t92773374\tDEL\n11\t93021134\t93022156\tDEL\n11\t93102800\t93103118\tDEL_ALU\n11\t93578001\t93578212\tDEL\n11\t93679228\t93681405\tDEL\n11\t94091791\t94091841\tDEL\n11\t94684369\t94684370\tLINE1;TSD=AA\n11\t96001923\t96003398\tDEL\n11\t96233119\t96233431\tDEL_ALU\n11\t96614759\t96615086\tDEL_ALU\n11\t98248208\t98248606\tDEL\n11\t99276322\t99276662\tDEL_ALU\n11\t102169772\t102169773\tALU;TSD=AGTTTGCCAGTATTTTATT\n11\t102471846\t102472162\tDEL_ALU\n11\t103087928\t103088084\tDEL_ALU\n11\t103201280\t103201281\tALU;TSD=ACAATAAATTTTTT\n11\t103916379\t103918469\tDEL\n11\t104180380\t104180723\tDEL_ALU\n11\t106044581\t106044582\tALU;TSD=AAAGAAATAGCACTTGA\n11\t106595867\t106596164\tDEL_ALU\n11\t107158610\t107158665\tDEL\n11\t109930919\t109930994\tDEL\n11\t109976699\t109977025\tDEL_ALU\n11\t110276938\t110276939\tALU;TSD=CGGGCCCGGTATTTTT\n11\t119932287\t119932656\tDEL\n11\t122595306\t122595360\tDEL\n11\t124830138\t124830246\tDEL_ALU\n11\t125053085\t125053375\tDEL_ALU\n11\t125719438\t125719592\tDEL\n11\t127456298\t127456432\tDEL\n11\t127740935\t127740936\tALU;TSD=null\n11\t128682712\t128683409\tDEL\n11\t132368628\t132368682\tDEL\n11\t132558585\t132558874\tDEL_ALU\n11\t134305647\t134305648\tLINE1;TSD=null\n11\t134803512\t134805507\tDEL\n12\t177787\t187378\tCNV\n12\t240152\t240208\tDEL\n12\t1864004\t1864320\tDEL\n12\t2089856\t2089857\tALU;TSD=CCTTTAACTATTTTT\n12\t2300995\t2301051\tDEL\n12\t4043666\t4044819\tDEL\n12\t7830054\t7830055\tALU;TSD=TTATCAGGTTCTT\n12\t8558501\t8568269\tDEL\n12\t8558618\t8591535\tDEL\n12\t8568920\t8587027\tCNV\n12\t8625578\t8625889\tDEL_ALU\n12\t9016853\t9017888\tDEL\n12\t9635128\t9688881\tDEL\n12\t9722037\t9723011\tDEL\n12\t10234202\t10234203\tALU;TSD=GGGCAAATTAATTTCTTT\n12\t11068046\t11068300\tDEL\n12\t11222191\t11249671\tCNV\n12\t11258524\t11258838\tDEL_ALU\n12\t11288103\t11288156\tDEL\n12\t11515723\t11544432\tCNV\n12\t12544792\t12546607\tINV\n12\t12933703\t12933704\tLINE1;TSD=ACACAGCTAATTTTTGTAGTTTTT\n12\t13199068\t13199172\tDEL\n12\t14258601\t14258932\tDEL_ALU\n12\t15104647\t15104648\tALU;TSD=AAAACATTGAGGAGA\n12\t15608405\t15613576\tDEL\n12\t16420132\t16421288\tDEL\n12\t17444827\t17445939\tDEL\n12\t19806222\t19806223\tALU;TSD=AAGAGGCATTAAGAG\n12\t22047473\t22047575\tDEL\n12\t22123796\t22123797\tALU;TSD=TCCCTTCCATTCTT\n12\t23795725\t23796038\tDEL_ALU\n12\t23939446\t23940212\tDEL\n12\t24460412\t24460701\tDEL\n12\t25462949\t25462950\tALU;TSD=AAAGATGCAGGGATGG\n12\t27433987\t27434318\tDEL_ALU\n12\t27864811\t27864812\tALU;TSD=ATAATTGTCTATTTTT\n12\t28274591\t28274592\tALU;TSD=AAAGAAAATGA\n12\t29844383\t29846440\tDEL\n12\t30371300\t30371728\tDEL\n12\t32358663\t32358664\tALU;TSD=TATATGTCAATTTT\n12\t32443055\t32443160\tDEL\n12\t32963599\t32963914\tDEL_ALU\n12\t33296520\t33307372\tDEL\n12\t33325803\t33325804\tLINE1;TSD=CTTGCTTTTC\n12\t40673027\t40673028\tALU;TSD=GCCAATAGTTTACTTTTT\n12\t40832796\t40832797\tALU;TSD=GAAAAAATTTTAC\n12\t41183193\t41183503\tDEL\n12\t41757437\t41757525\tDEL\n12\t42238053\t42238877\tDEL_LINE1\n12\t43256994\t43256995\tLINE1;TSD=TTTAATTCTTTTTAATATTTTT\n12\t43717940\t43717941\tALU;TSD=CCAAATATTCTT\n12\t45011174\t45011496\tDEL_ALU\n12\t45131147\t45131148\tALU;TSD=CAATAACTTTTTT\n12\t45419555\t45419556\tALU;TSD=AATAGAAAGATCTG\n12\t45903207\t45909947\tDEL\n12\t45948359\t45948444\tDEL\n12\t46046309\t46046310\tALU;TSD=AAAAGCAATTATA\n12\t47075350\t47075698\tDEL_ALU\n12\t49709229\t49710582\tDEL\n12\t54245407\t54245696\tDEL_ALU\n12\t58028003\t58029239\tDEL\n12\t58083278\t58083279\tALU;TSD=AAAAAACATTATAGTTTGG\n12\t60521816\t60525034\tDEL\n12\t61053825\t61053826\tALU;TSD=AAGAATATTT\n12\t62295031\t62295217\tDEL\n12\t71532784\t71533816\tINV\n12\t71602363\t71604480\tDEL\n12\t72356517\t72358157\tDEL\n12\t72739802\t72739855\tDEL\n12\t74104692\t74105402\tDEL\n12\t74571808\t74572021\tDEL\n12\t75320691\t75320692\tALU;TSD=GAAACCATCATTCTT\n12\t75931101\t75931102\tALU;TSD=GAAGATTATTTTCTTT\n12\t77311762\t77311763\tALU;TSD=GGACCAAACTTGTTTTT\n12\t77908656\t77908979\tDEL_ALU\n12\t82139688\t82144323\tDEL\n12\t83844044\t83844608\tDEL_LINE1\n12\t84042269\t84042582\tDEL_ALU\n12\t84086124\t84086125\tALU;TSD=CACCAGTTTTTT\n12\t84484484\t84484800\tDEL_ALU\n12\t84593115\t84596020\tDEL\n12\t86523315\t86523635\tDEL_ALU\n12\t86653628\t86653629\tALU;TSD=null\n12\t88338170\t88338171\tALU;TSD=AAAAGAAAATG\n12\t94358328\t94358640\tDEL_ALU\n12\t95244023\t95244449\tDEL\n12\t95344056\t95344366\tDEL_ALU\n12\t96010454\t96012414\tDEL\n12\t96233490\t96236776\tDEL\n12\t97495358\t97495359\tALU;TSD=AAAAACAAATGTAG\n12\t102102410\t102107115\tDEL\n12\t102314060\t102314162\tDEL_ALU\n12\t106890961\t106890962\tALU;TSD=GTGTTAGCGTATTTT\n12\t111976291\t111980000\tDEL\n12\t115023765\t115023828\tDEL\n12\t122748410\t122758684\tDUP\n12\t122947416\t122947466\tDEL\n12\t123010338\t123010667\tDEL_ALU\n12\t124795816\t124795936\tDEL\n12\t127660426\t127660752\tDEL_ALU\n12\t127947266\t127947318\tDEL\n12\t128037977\t128038294\tDEL_ALU\n12\t128932242\t128932541\tDEL_ALU\n12\t130060287\t130060618\tDEL_ALU\n12\t130455055\t130455056\tALU;TSD=AAAAAGGCTC\n12\t131093927\t131094224\tDEL\n12\t133469012\t133469013\tALU;TSD=GACAACATTCTTTT\n13\t19201274\t19204213\tDEL\n13\t21124682\t21124756\tDEL\n13\t21894780\t21894781\tALU;TSD=ACCGACCAAGACTTCT\n13\t22052127\t22055126\tDEL\n13\t22530362\t22530363\tALU;TSD=AAAAAACCATCAG\n13\t22574676\t22574770\tDEL\n13\t23055208\t23055515\tDEL_ALU\n13\t23632424\t23637293\tDEL\n13\t24057640\t24057972\tDEL_ALU\n13\t24631697\t24633601\tDEL\n13\t25270559\t25270895\tDEL_ALU\n13\t25721017\t25721336\tDEL_ALU\n13\t27050020\t27052181\tDEL\n13\t29891562\t29891873\tDEL_ALU\n13\t36818914\t36818975\tDEL\n13\t37414451\t37414779\tDEL\n13\t37949998\t37949999\tALU;TSD=CCTTTATTTATTTTTTT\n13\t38071941\t38085578\tDEL\n13\t39057317\t39060204\tDEL\n13\t39499637\t39499638\tALU;TSD=GAAAGTAGAGAGTTGA\n13\t39934236\t39935552\tDEL\n13\t42726801\t42726802\tALU;TSD=GACCTCTTTATTCTT\n13\t42771403\t42771404\tLINE1;TSD=AAAAAAAAAAAAAA\n13\t42946047\t42946378\tDEL_ALU\n13\t43053246\t43053893\tDEL\n13\t46719751\t46720077\tDEL_ALU\n13\t48015694\t48015798\tDEL\n13\t48419925\t48420081\tDEL_ALU\n13\t49533344\t49536617\tDEL\n13\t49951399\t49953862\tDEL\n13\t51069347\t51075082\tDEL\n13\t51551934\t51552263\tDEL_ALU\n13\t52852412\t52864557\tCNV\n13\t54606529\t54606530\tALU;TSD=TATCAGTCCCTTCTT\n13\t55941166\t55941469\tDEL\n13\t56151096\t56151219\tDEL\n13\t56186576\t56186577\tALU;TSD=TAAAAGTTTTTTTTTTT\n13\t57787093\t57788378\tDEL\n13\t57975500\t57975848\tDEL_ALU\n13\t59396895\t59396896\tALU;TSD=GAGTGTTACAGTTCTT\n13\t60172490\t60172823\tDEL_ALU\n13\t61462344\t61462345\tLINE1;TSD=TCTTCTCTTTTTT\n13\t61734497\t61734498\tLINE1;TSD=AAGAGTTTGGGGA\n13\t61787418\t61787419\tALU;TSD=AAAATTTAATTATTTTT\n13\t64162211\t64162213\tINS\n13\t65342437\t65344433\tDEL\n13\t65637801\t65638216\tDEL\n13\t67903471\t67903472\tALU;TSD=TATCTATCTGTATTCTT\n13\t67950542\t67950594\tDEL\n13\t68977877\t68978201\tDEL\n13\t69966662\t69966961\tDEL_ALU\n13\t70079642\t70079696\tDEL\n13\t72386637\t72386687\tDEL\n13\t72477264\t72480580\tDEL\n13\t72478323\t72482473\tDEL\n13\t72843031\t72846923\tDEL\n13\t72893591\t72898446\tDEL\n13\t74074911\t74075239\tDEL_ALU\n13\t75625199\t75625277\tDEL\n13\t76639273\t76639600\tDEL_ALU\n13\t78997598\t78998715\tDEL\n13\t79259800\t79259801\tLINE1;TSD=TAAACACAGTTTT\n13\t79271601\t79271602\tALU;TSD=AGAAATGGGCATATTC\n13\t79661067\t79661402\tDEL_ALU\n13\t80678313\t80678630\tDEL_ALU\n13\t81373740\t81373741\tALU;TSD=AAAAATATAGAATGAACTGAGAAA\n13\t81747236\t81747564\tDEL_ALU\n13\t82355641\t82355696\tDEL\n13\t83179448\t83179755\tDEL_ALU\n13\t85270032\t85270084\tDEL\n13\t85871612\t85871613\tLINE1;TSD=ATATTTTCTTT\n13\t86166446\t86166447\tALU;TSD=TT\n13\t86340152\t86340153\tLINE1;TSD=null\n13\t87392969\t87392970\tALU;TSD=CTTTTAACTGAACATTTCTAATTTT\n13\t87696257\t87696258\tALU;TSD=AAAGAACTCTCCACCCCA\n13\t89003264\t89003600\tDEL_ALU\n13\t90401846\t90401847\tALU;TSD=AGAAATGAGTTTTATA\n13\t90550575\t90550576\tALU;TSD=AACAGGAGACAGATG\n13\t90726943\t90726998\tDEL\n13\t90862850\t90864805\tDEL\n13\t90947642\t90947643\tALU;TSD=null\n13\t91160038\t91160287\tDEL_ALU\n13\t92111709\t92111830\tDEL\n13\t92161674\t92161675\tALU;TSD=AACATATTCATATTTT\n13\t92261286\t92261287\tALU;TSD=AATTTAGATTTGA\n13\t92279248\t92279583\tDEL_ALU\n13\t92513980\t92513981\tALU;TSD=AAATAAAACATGTTGCTA\n13\t93828421\t93828422\tALU;TSD=CATGCAGAAAAGGTTTTT\n13\t94120730\t94120731\tALU;TSD=AATAAAGAAGCA\n13\t97347834\t97347922\tDEL\n13\t98721236\t98721556\tDEL_ALU\n13\t98734914\t98734915\tALU;TSD=GACAGTTTGCCATTAACCTT\n13\t99254021\t99258251\tDEL\n13\t100082627\t100082628\tALU;TSD=TATCCATCCATCTGTT\n13\t101535973\t101535974\tALU;TSD=GAGTTTATTCTT\n13\t101625773\t101625871\tDEL\n13\t101894135\t101896428\tDEL\n13\t103931643\t103931958\tDEL_ALU\n13\t104009854\t104010173\tDEL_ALU\n13\t104091776\t104092258\tDEL\n13\t104144377\t104144660\tDEL_ALU\n13\t105161209\t105161523\tDEL_ALU\n13\t106449327\t106449921\tDEL\n13\t107924538\t107924861\tDEL_ALU\n13\t108603779\t108603844\tDEL\n13\t108719818\t108719819\tALU;TSD=AATAATTTTT\n13\t108947031\t108951803\tDEL\n13\t109361752\t109362442\tDEL\n13\t110812491\t110812806\tDEL_ALU\n13\t111076811\t111076812\tALU;TSD=AATAAGTTAATTCTTT\n13\t111559414\t111559652\tDEL_ALU\n13\t111703587\t111703667\tDEL\n13\t112993799\t112993800\tALU;TSD=AAAGAAAAAATTATTGAACAG\n13\t113520967\t113520968\tALU;TSD=TCTGGGTGACTTCT\n13\t113616375\t113616435\tDEL\n13\t113991046\t113991116\tDEL\n14\t19112155\t19126473\tCNV\n14\t19275560\t19303201\tDEL\n14\t19286876\t19293367\tDEL\n14\t19290037\t19297660\tDEL\n14\t20335553\t20423316\tCNV\n14\t21176134\t21176135\tSVA;TSD=GCTAAAGGGATTTT\n14\t21536131\t21536457\tDEL_ALU\n14\t21778185\t21778397\tDEL\n14\t21952624\t21954666\tDEL\n14\t23922251\t23922650\tDEL\n14\t25262334\t25263126\tDEL\n14\t26147100\t26147457\tDEL_ALU\n14\t26283834\t26284791\tDEL\n14\t29728038\t29728802\tDEL\n14\t30854683\t30854684\tLINE1;TSD=AAGATTACCAAATGAC\n14\t31444309\t31444310\tALU;TSD=AAGAAAAAGACAC\n14\t32953270\t32954364\tDEL\n14\t33435780\t33436003\tDEL_ALU\n14\t34514028\t34514838\tDEL\n14\t35401402\t35401723\tDEL_ALU\n14\t35428788\t35432438\tDEL\n14\t36674760\t36674761\tLINE1;TSD=AAGAATTTCCTGTTTA\n14\t37999777\t38013670\tDUP\n14\t38245235\t38245451\tDEL_ALU\n14\t40312966\t40312967\tALU;TSD=GATTCTTATCAACTCTTTT\n14\t40882900\t40882901\tALU;TSD=TCCTTTGTCCTCTA\n14\t41122391\t41122487\tDEL\n14\t41602366\t41602417\tDEL\n14\t43899449\t43899532\tDEL\n14\t45014099\t45014100\tALU;TSD=CTCA\n14\t46577923\t46578243\tDEL_ALU\n14\t48334241\t48334556\tDEL_ALU\n14\t50118870\t50119027\tDEL_ALU\n14\t51408908\t51409542\tDEL\n14\t51432094\t51432095\tALU;TSD=CTGGAATTAAATCTT\n14\t51719000\t51719001\tALU;TSD=AAAGAAATCTTTCC\n14\t52594665\t52594980\tDEL_ALU\n14\t54564051\t54564385\tDEL_ALU\n14\t54710363\t54713688\tDEL\n14\t54815743\t54815744\tALU;TSD=TGTCCCAAATATTCTT\n14\t55795871\t55795872\tALU;TSD=TAAAACGTGGTTTATTTCT\n14\t59883503\t59884059\tDEL\n14\t60454171\t60454172\tALU;TSD=CAACCTTAACTTCTTT\n14\t60575499\t60575500\tALU;TSD=ATATTGATTTTTT\n14\t63226292\t63226293\tALU;TSD=AGGGTATAT\n14\t63787170\t63787502\tDEL_ALU\n14\t65015043\t65015044\tALU;TSD=GAGTTTCT\n14\t65606353\t65608023\tDEL\n14\t68603032\t68603740\tDEL\n14\t68995379\t68995453\tDEL_ALU\n14\t70687829\t70689462\tDEL\n14\t71320960\t71321253\tDEL_ALU\n14\t76813775\t76814213\tDEL\n14\t77193681\t77193739\tDEL\n14\t78249852\t78250190\tDEL_ALU\n14\t78982709\t78982710\tALU;TSD=AGAATAGAAAAGAAGG\n14\t79653926\t79654025\tDEL_ALU\n14\t80106272\t80115058\tDEL\n14\t81786791\t81786792\tSVA;TSD=ACCATTTTTATAATTAAT\n14\t82499115\t82503327\tDEL\n14\t83019601\t83019882\tDEL_ALU\n14\t83386736\t83386899\tDEL\n14\t83435132\t83437109\tDEL\n14\t83852035\t83852358\tDEL\n14\t85139129\t85139627\tDEL\n14\t87858056\t87858383\tDEL_ALU\n14\t92125068\t92125069\tALU;TSD=AAAAAAAGGAAGGGA\n14\t93336487\t93338122\tDEL\n14\t94235337\t94235393\tDEL\n14\t98494393\t98494394\tALU;TSD=CCAACTCAAAGACAGTT\n14\t98783966\t98785085\tDEL\n14\t100844997\t100845330\tDEL_ALU\n14\t105417023\t105418385\tDEL\n15\t20393078\t20419533\tCNV\n15\t20598942\t20625797\tCNV\n15\t20846721\t20867075\tCNV\n15\t21902635\t21929978\tCNV\n15\t22336904\t22343964\tCNV\n15\t22372936\t22383193\tCNV\n15\t23671395\t23674750\tDEL\n15\t24207057\t24207366\tDEL_ALU\n15\t24350936\t24389975\tCNV\n15\t24354619\t24507954\tDEL\n15\t24377380\t24438730\tCNV\n15\t24384356\t24440422\tDEL\n15\t24409775\t24485111\tDEL\n15\t24450166\t24484075\tCNV\n15\t24495296\t24502596\tCNV\n15\t24839317\t24839639\tDEL_ALU\n15\t25116952\t25118666\tDEL\n15\t28175804\t28175805\tLINE1;TSD=GCTTGCCAACTCTT\n15\t28701268\t28709132\tCNV\n15\t29411474\t29411896\tDEL_LINE1\n15\t32291220\t32291528\tDEL_ALU\n15\t34741739\t34742019\tDEL_ALU\n15\t35009016\t35009351\tDEL_ALU\n15\t35473633\t35473634\tALU;TSD=CCCTGTGTTCACTATTCTT\n15\t39372403\t39373464\tDEL\n15\t39691605\t39691606\tALU;TSD=TAAATGTCTGTGTTC\n15\t39744385\t39744852\tDEL\n15\t41100332\t41100333\tALU;TSD=CAAAGCTACTCTTT\n15\t41604020\t41604430\tDEL\n15\t42017735\t42018067\tDEL_ALU\n15\t45569912\t45569913\tALU;TSD=null\n15\t46067964\t46068314\tDEL_ALU\n15\t46126006\t46126007\tALU;TSD=GAAAATTATGCAAAATCC\n15\t46860705\t46861165\tDEL\n15\t47507342\t47507343\tLINE1;TSD=TTCAATTGCATTTA\n15\t47720633\t47720807\tDEL\n15\t49544866\t49547867\tDEL\n15\t52525183\t52525516\tDEL_ALU\n15\t54188220\t54188221\tALU;TSD=TAAAATGCATCTC\n15\t55429892\t55430213\tDEL_ALU\n15\t58282108\t58282214\tDEL_ALU\n15\t59712886\t59713217\tDEL_ALU\n15\t61328974\t61328975\tLINE1;TSD=TAGAGCAGAGATTTCT\n15\t64633178\t64633503\tDEL_ALU\n15\t64664107\t64664226\tDEL\n15\t66633812\t66634133\tDEL_ALU\n15\t66877660\t66878428\tDEL\n15\t67868283\t67869396\tDEL\n15\t70408637\t70408638\tALU;TSD=AAAAAAAAGAGCGTC\n15\t71708614\t71713685\tDEL\n15\t71881570\t71882968\tDEL\n15\t72385965\t72388158\tDEL\n15\t72639551\t72639552\tALU;TSD=CAGAAATAGTTCTT\n15\t73983319\t73983320\tALU;TSD=TATGCTTTT\n15\t76884546\t76895794\tCNV\n15\t77092501\t77092502\tALU;TSD=ATACATGGATATTTTT\n15\t77330749\t77332719\tDEL\n15\t77851960\t77853175\tDEL\n15\t77910861\t77911235\tDEL_ALU\n15\t79084263\t79084355\tDEL\n15\t79891843\t79892164\tDEL_ALU\n15\t83551623\t83557675\tDEL_LINE1\n15\t86057007\t86059202\tDEL\n15\t91402096\t91402416\tDEL_ALU\n15\t94819903\t94819904\tALU;TSD=AAATAAGAAATATTTGG\n15\t94933278\t94933346\tDEL\n15\t98817015\t98817425\tDEL\n15\t98842312\t98843808\tDEL\n15\t98900055\t98900632\tDEL\n15\t99574506\t99575633\tDEL\n15\t99630150\t99630151\tALU;TSD=CAGGTGTG\n15\t100097884\t100097934\tDEL\n15\t100416670\t100423244\tDEL\n15\t100609946\t100612578\tDEL\n15\t100810993\t100810994\tALU;TSD=CCATTTTAAACATTTTT\n16\t998832\t1000718\tDEL\n16\t5180176\t5180669\tDEL\n16\t6957702\t6958488\tDEL\n16\t8535509\t8535510\tALU;TSD=AGAAACATCCTGAGAA\n16\t8755309\t8756834\tDEL\n16\t11683732\t11685291\tDEL\n16\t14075622\t14075741\tDEL\n16\t15059676\t15076875\tCNV\n16\t15080267\t15105113\tCNV\n16\t15099303\t15123498\tCNV\n16\t16631704\t16651111\tCNV\n16\t19230429\t19230781\tDEL_ALU\n16\t21239067\t21239068\tALU;TSD=CCTGCAAGTTTTCT\n16\t21518346\t21544882\tCNV\n16\t21541685\t21569415\tCNV\n16\t21573321\t21580382\tCNV\n16\t21588291\t21593314\tCNV\n16\t22611652\t22662020\tCNV\n16\t22623100\t22783757\tCNV\n16\t22650742\t22695701\tCNV\n16\t23047727\t23049533\tDEL\n16\t23528535\t23528848\tDEL_ALU\n16\t23865300\t23865301\tALU;TSD=GGTCAAGGCACTTCTT\n16\t23910886\t23911192\tDEL\n16\t25340109\t25343128\tDEL\n16\t26608023\t26608365\tDEL_ALU\n16\t26963254\t26963386\tDEL\n16\t32328771\t32370968\tCNV\n16\t32366481\t32410672\tCNV\n16\t32418983\t32469917\tCNV\n16\t32600305\t32601869\tDEL\n16\t32611029\t32642738\tCNV\n16\t32831659\t32863935\tCNV\n16\t33446163\t33480261\tCNV\n16\t33467709\t33467710\tALU;TSD=AAAATGTAATTAACG\n16\t33470755\t33495606\tCNV\n16\t33484521\t33543753\tCNV\n16\t33524565\t33570784\tCNV\n16\t33586835\t33590310\tDEL\n16\t33588532\t33626594\tCNV\n16\t34457085\t34712399\tCNV\n16\t46979627\t46979684\tDEL\n16\t48508916\t48511376\tDEL\n16\t48816867\t48817185\tDEL_ALU\n16\t49036072\t49036207\tDEL_ALU\n16\t49979396\t49979710\tDEL_ALU\n16\t52032355\t52033598\tDEL\n16\t52904248\t52904373\tDEL\n16\t53091851\t53095128\tCNV\n16\t53874981\t53874982\tALU;TSD=AATAAGAAGTGCCTG\n16\t54660356\t54660665\tDEL_ALU\n16\t55798890\t55822423\tCNV\n16\t55832207\t55864521\tCNV\n16\t58647190\t58650264\tDEL\n16\t58673838\t58677346\tDEL\n16\t58819558\t58819633\tDEL\n16\t60032082\t60032396\tDEL_ALU\n16\t61092204\t61092205\tALU;TSD=CCTACAACTATCTT\n16\t63442423\t63442753\tDEL_ALU\n16\t63756306\t63756388\tDEL\n16\t70181849\t70196732\tCNV\n16\t70553009\t70553329\tDEL_ALU\n16\t71866702\t71869740\tCNV\n16\t72753292\t72753597\tDEL_ALU\n16\t74393945\t74434300\tCNV\n16\t75429831\t75430673\tDEL\n16\t76539138\t76544021\tDEL\n16\t77090638\t77092862\tDEL\n16\t78371604\t78384909\tDEL\n16\t78757451\t78757506\tDEL\n16\t78876665\t78877564\tDEL\n16\t80196900\t80197002\tDEL\n16\t81619267\t81619360\tDEL\n16\t82164197\t82164444\tDEL\n16\t82164690\t82164691\tALU;TSD=AAGAATGGACATATG\n16\t84501432\t84504122\tDEL\n16\t85149501\t85150074\tDEL\n16\t85188639\t85189823\tINV\n16\t86284308\t86284616\tDEL_ALU\n16\t87981799\t87981853\tDEL\n16\t88112672\t88115662\tDEL\n16\t88862644\t88863596\tDEL\n16\t89291389\t89291390\tALU;TSD=AAGATGCATTCTGG\n16\t89896054\t89898405\tDEL\n17\t185812\t185874\tDEL\n17\t548982\t550033\tDEL\n17\t723720\t724862\tDEL\n17\t1097737\t1098192\tDEL\n17\t1146295\t1147646\tDEL\n17\t1602167\t1602943\tDEL\n17\t1654675\t1655405\tDEL\n17\t1912668\t1913537\tDEL\n17\t2719916\t2721218\tDEL\n17\t3734770\t3735834\tDEL\n17\t5464738\t5465062\tDEL_ALU\n17\t6874732\t6875034\tDEL_ALU\n17\t7755714\t7755766\tDEL\n17\t10006454\t10006923\tDEL\n17\t10203420\t10203771\tDEL_ALU\n17\t11430197\t11430247\tDEL\n17\t11557370\t11557691\tDEL_ALU\n17\t12196579\t12196896\tDEL_ALU\n17\t13220477\t13220804\tDEL_ALU\n17\t13531701\t13532712\tDEL\n17\t14189910\t14191557\tDEL\n17\t15863568\t15863886\tDEL_ALU\n17\t16534216\t16534217\tSVA;TSD=AAAAAATCTTTCTC\n17\t16661446\t16704453\tDUP\n17\t16711552\t16724682\tCNV\n17\t17230370\t17231247\tDEL\n17\t18359814\t18376676\tCNV\n17\t18418796\t18465083\tDEL\n17\t18421015\t18422388\tDEL\n17\t18507410\t18522042\tCNV\n17\t18729995\t18745198\tDEL\n17\t26780360\t26783483\tDEL\n17\t30852472\t30872544\tDEL\n17\t32484889\t32485002\tDEL\n17\t32872968\t32874613\tDEL\n17\t34376278\t34376609\tDEL_ALU\n17\t34436099\t34482872\tCNV\n17\t35143423\t35143742\tDEL_ALU\n17\t35755635\t35760346\tDEL\n17\t35755640\t35758781\tDEL\n17\t36169343\t36169344\tALU;TSD=GGATATCTTCTTTT\n17\t36963475\t36964937\tDEL\n17\t39421554\t39432271\tDEL\n17\t43576081\t43589376\tDEL\n17\t43647443\t43649234\tDEL\n17\t44086723\t44086961\tDEL\n17\t44176394\t44176717\tDEL_ALU\n17\t44223907\t44224221\tDEL_ALU\n17\t44230893\t44262697\tCNV\n17\t44341412\t44366497\tCNV\n17\t45966643\t45966644\tALU;TSD=null\n17\t51957128\t51957129\tALU;TSD=AGAAAACCCC\n17\t52705176\t52705226\tDEL\n17\t54947583\t54947584\tALU;TSD=AAAATTAAGAAATGATTTGA\n17\t55687808\t55689918\tDEL\n17\t56206964\t56213515\tCNV\n17\t56210429\t56211237\tDEL\n17\t61565904\t61565905\tALU;TSD=ATACAGTCACTTTT\n17\t62213208\t62214203\tDEL\n17\t65514573\t65514637\tDEL\n17\t65520854\t65521184\tDEL_ALU\n17\t65727354\t65727630\tDEL_ALU\n17\t72393115\t72393249\tDEL\n17\t74362239\t74365300\tDEL\n17\t74987520\t74987839\tDEL_ALU\n17\t76282240\t76283435\tDEL\n17\t78056052\t78056053\tALU;TSD=CAGGCGTG\n17\t79577680\t79578003\tDEL_ALU\n17\t80185492\t80185561\tDEL\n17\t81025596\t81025682\tDEL\n18\t207028\t207707\tDEL\n18\t853490\t853491\tALU;TSD=AAGAAATCATAC\n18\t1235790\t1235791\tALU;TSD=AAAAATAATTACA\n18\t2472723\t2472837\tDEL\n18\t3997014\t3997471\tDEL\n18\t4955590\t4955987\tDEL\n18\t5209320\t5210888\tDEL\n18\t5209658\t5210654\tDEL\n18\t5324643\t5326242\tDEL\n18\t5325026\t5325315\tDEL\n18\t5457105\t5457205\tDEL\n18\t9225123\t9225460\tDEL\n18\t9287084\t9287085\tALU;TSD=AATACTGTGTGTTTTTT\n18\t9385391\t9385715\tDEL_ALU\n18\t9621959\t9622233\tDEL\n18\t10222279\t10223606\tDEL\n18\t10331018\t10331158\tDEL\n18\t11509065\t11511527\tINV\n18\t11509705\t11511474\tDEL\n18\t12503560\t12504493\tDEL\n18\t14803791\t14811140\tCNV\n18\t15095262\t15095263\tLINE1;TSD=GAGGACACTATTCTT\n18\t24571615\t24572338\tDEL\n18\t24791588\t24791874\tDEL\n18\t25851171\t25851172\tALU;TSD=null\n18\t26363743\t26364064\tDEL_ALU\n18\t27629680\t27630006\tDEL_ALU\n18\t27800861\t27800862\tALU;TSD=GGAAATAGGGTCTT\n18\t27872570\t27872899\tDEL_ALU\n18\t31746705\t31747042\tDEL_ALU\n18\t32530967\t32531232\tDEL\n18\t35306041\t35306639\tDEL\n18\t35315621\t35315939\tDEL_ALU\n18\t36512546\t36512547\tALU;TSD=AAAAGCAAATTTGA\n18\t37061632\t37061962\tDEL_ALU\n18\t38006382\t38006996\tDEL\n18\t38864885\t38868159\tDEL\n18\t43261003\t43261328\tDEL_ALU\n18\t44338417\t44338754\tDEL_ALU\n18\t44715166\t44715243\tDEL\n18\t45099894\t45100206\tDEL_ALU\n18\t45996143\t45996460\tDEL_ALU\n18\t46159351\t46159429\tDEL\n18\t47147440\t47147441\tALU;TSD=null\n18\t47694968\t47698389\tDEL\n18\t49444746\t49444902\tDEL\n18\t49931730\t49931731\tALU;TSD=null\n18\t50462570\t50463032\tDEL\n18\t50612385\t50612967\tDEL\n18\t50925977\t50926300\tDEL_ALU\n18\t50930750\t50930811\tDEL\n18\t51952950\t51956960\tDEL\n18\t54706193\t54706194\tALU;TSD=AAGATAAACATTC\n18\t54946735\t54948718\tDEL\n18\t55671122\t55671428\tDEL_ALU\n18\t57042133\t57042185\tDEL\n18\t57258178\t57258516\tDEL_ALU\n18\t57683363\t57683364\tALU;TSD=GCCAGCCATCTT\n18\t59672757\t59674196\tDEL\n18\t60686113\t60686114\tALU;TSD=AAGAACAACACATA\n18\t62996845\t62996926\tDEL\n18\t63487287\t63487288\tALU;TSD=AAAAAAATCATCTGAGGC\n18\t63533238\t63533582\tDEL_ALU\n18\t63723836\t63732368\tDEL\n18\t63766845\t63769201\tDEL\n18\t64542930\t64543251\tDEL_ALU\n18\t66082127\t66082181\tDEL\n18\t66399175\t66399176\tALU;TSD=AAAACTGAACACAT\n18\t66572511\t66572512\tALU;TSD=GAAATTATATATTTTTTA\n18\t67160066\t67160067\tALU;TSD=TGGTGGGCTTTTTT\n18\t67949598\t67949923\tDEL_ALU\n18\t68846724\t68847058\tDEL_ALU\n18\t70353219\t70353421\tDEL\n18\t71444207\t71444542\tDEL_ALU\n18\t71456838\t71456900\tDEL\n18\t72152428\t72152768\tDEL_ALU\n18\t72779980\t72780030\tDEL\n18\t73570006\t73570331\tDEL_ALU\n18\t73901640\t73902034\tDEL\n18\t74347197\t74348009\tDEL\n18\t74365364\t74365670\tDEL_ALU\n18\t74638701\t74638702\tALU;TSD=null\n18\t74769770\t74770071\tDEL_ALU\n18\t75266983\t75268167\tDEL\n18\t75267029\t75267561\tDEL\n18\t76662372\t76666356\tDEL\n18\t76664254\t76665058\tDEL\n18\t77309946\t77312089\tDEL\n19\t393559\t395010\tDEL\n19\t565965\t568163\tDEL\n19\t566005\t569470\tDEL\n19\t2909164\t2910884\tDEL\n19\t2909363\t2910540\tDEL\n19\t3711008\t3711333\tDEL\n19\t3715862\t3717189\tDEL\n19\t4217790\t4224498\tCNV\n19\t5509856\t5510792\tDEL\n19\t12539909\t12540100\tDEL\n19\t12556643\t12558236\tDEL\n19\t12694867\t12698924\tDEL\n19\t15046391\t15049476\tDEL\n19\t15927952\t15927953\tALU;TSD=AAAAGAATGGAAAAGGA\n19\t18566051\t18566665\tDEL\n19\t21752923\t21756703\tCNV\n19\t23320788\t23321105\tDEL_ALU\n19\t24011300\t24011301\tSVA;TSD=AAGTATTTCAACCTT\n19\t27961358\t27963241\tDEL\n19\t31287472\t31289746\tDEL\n19\t31690684\t31690685\tALU;TSD=AGAGAATTAAATGA\n19\t35851718\t35863310\tCNV\n19\t36662694\t36662964\tDEL\n19\t37046181\t37046497\tDEL_ALU\n19\t37284317\t37284627\tDEL_ALU\n19\t37463442\t37463510\tDEL\n19\t38341368\t38345669\tDEL\n19\t45444699\t45444700\tLINE1;TSD=TTT\n19\t45473128\t45474248\tDEL\n19\t46278623\t46279603\tDEL\n19\t47528255\t47528724\tDEL\n19\t51406745\t51408334\tDEL\n19\t51776390\t51776701\tDEL_ALU\n19\t52134835\t52149093\tCNV\n19\t52948969\t52949075\tDEL\n19\t53096015\t53097618\tDEL\n19\t53422195\t53424196\tDEL\n19\t54555536\t54560655\tDEL\n19\t55194225\t55194291\tDEL\n19\t55266365\t55280663\tCNV\n19\t56041811\t56042147\tDEL\n19\t56580958\t56581008\tDEL\n19\t56966061\t56966062\tALU;TSD=AAAAATCAAATAAAAATGGATTAAAGAC\n19\t57425532\t57425533\tALU;TSD=AAAAGTCTTCATCCTCG\n19\t57474871\t57475609\tDEL\n20\t594427\t594481\tDEL\n20\t1389096\t1390815\tDEL\n20\t1546228\t1546229\tALU;TSD=AAGAAATGTTTCCTG\n20\t1560739\t1593685\tDEL\n20\t1589901\t1593853\tDEL\n20\t2359923\t2360518\tDEL\n20\t3037866\t3038182\tDEL_ALU\n20\t4082846\t4082847\tSVA;TSD=AAGAAAATACAAATCA\n20\t5268423\t5268424\tSVA;TSD=GACACTGGATTCTT\n20\t5534545\t5534921\tDEL_ALU\n20\t5629054\t5630397\tDEL\n20\t6150945\t6151277\tDEL_ALU\n20\t7274336\t7274649\tDEL_ALU\n20\t8816504\t8816505\tALU;TSD=AAAACTTAGTGAC\n20\t9640983\t9640984\tALU;TSD=AAGATTATTTTAATTT\n20\t9696761\t9696815\tDEL_LINE1\n20\t11517265\t11517588\tDEL_ALU\n20\t14529068\t14529381\tDEL_ALU\n20\t15711537\t15711538\tALU;TSD=null\n20\t15711606\t15712437\tDEL\n20\t19061416\t19061729\tDEL_ALU\n20\t21286088\t21288772\tDEL\n20\t22655322\t22655650\tDEL_ALU\n20\t23103317\t23103618\tDEL\n20\t24903696\t24904414\tDEL\n20\t26092755\t26094314\tDEL\n20\t26297587\t26302710\tDEL\n20\t30899227\t30899532\tDEL_ALU\n20\t33115811\t33116144\tDEL_ALU\n20\t33241726\t33244473\tDEL\n20\t38337632\t38337769\tDEL_ALU\n20\t42271862\t42274588\tDEL\n20\t42676125\t42676524\tDEL_SVA\n20\t44359412\t44359524\tDEL\n20\t48543735\t48543815\tDEL\n20\t52750565\t52750615\tDEL\n20\t53292651\t53292965\tDEL_ALU\n20\t53761850\t53761851\tALU;TSD=GAAAAATTTC\n20\t54114280\t54114281\tLINE1;TSD=null\n20\t54434518\t54440716\tDEL_LINE1\n20\t54463220\t54463537\tDEL_ALU\n20\t55587403\t55587945\tDEL\n20\t57723444\t57723778\tDEL_ALU\n20\t57785904\t57786120\tDEL_ALU\n20\t59804673\t59804723\tDEL\n20\t59974166\t59974487\tDEL_ALU\n20\t61330155\t61330255\tDEL\n20\t61724537\t61725820\tDEL\n20\t61724701\t61725601\tDEL\n20\t62267510\t62268021\tDEL\n20\t62392041\t62392585\tDEL\n20\t62767800\t62767854\tDEL\n21\t10945865\t10990763\tCNV\n21\t10992014\t10999734\tCNV\n21\t14415002\t14415003\tALU;TSD=null\n21\t14981354\t15016529\tDEL\n21\t15244513\t15253042\tCNV\n21\t15253724\t15259810\tCNV\n21\t15264074\t15272540\tCNV\n21\t15652867\t15652868\tALU;TSD=AAAAAATGATTAGG\n21\t16275282\t16275361\tDEL\n21\t18612378\t18613698\tDEL\n21\t19326713\t19329268\tDEL\n21\t22051926\t22051995\tDEL_ALU\n21\t23746673\t23746730\tDEL\n21\t24742232\t24742546\tDEL_ALU\n21\t24828945\t24829264\tDEL_ALU\n21\t26497431\t26497432\tALU;TSD=AAGGAAGGATG\n21\t26825131\t26825398\tDEL_LINE1\n21\t27374095\t27374746\tINV\n21\t28020653\t28021711\tINV\n21\t28221359\t28221360\tALU;TSD=CCGGGAAATGCTTTTTATT\n21\t30552224\t30552588\tDEL\n21\t30601816\t30602156\tDEL_ALU\n21\t37014963\t37015170\tDEL\n21\t37237944\t37237945\tALU;TSD=AAAAAATGTTATTTTT\n21\t37321097\t37321098\tALU;TSD=TGTTGAATCTTTTT\n21\t37864436\t37864758\tDEL_ALU\n21\t39004560\t39004561\tALU;TSD=AAAAATTACCTCGT\n21\t39900346\t39900670\tDEL_ALU\n21\t41586865\t41587190\tDEL_ALU\n21\t42054568\t42054759\tDEL\n21\t42341846\t42341901\tDEL\n21\t42402882\t42403203\tDEL_ALU\n21\t45619181\t45620711\tDEL\n21\t45850285\t45850611\tDEL_ALU\n21\t47657351\t47658672\tDEL\n22\t16050654\t16063474\tCNV\n22\t17026339\t17027748\tDEL\n22\t18003573\t18004242\tDEL\n22\t18047360\t18047718\tDEL_ALU\n22\t18057747\t18060454\tDEL\n22\t18099516\t18099826\tDEL_ALU\n22\t18141696\t18144628\tDEL\n22\t18283896\t18284218\tDEL_ALU\n22\t18977575\t18977640\tDEL\n22\t19571624\t19573094\tDEL\n22\t20950623\t20953843\tDEL\n22\t23576847\t23577807\tDEL\n22\t23900769\t23903232\tDEL\n22\t23964852\t23964910\tDEL\n22\t24025584\t24027537\tDEL\n22\t24198505\t24198506\tALU;TSD=null\n22\t24276431\t24279231\tDEL\n22\t24326713\t24333476\tCNV\n22\t26891514\t26891650\tDEL\n22\t29633088\t29635394\tDEL\n22\t31776449\t31780070\tCNV\n22\t32819942\t32819943\tALU;TSD=AAAACTCCACAGCTTT\n22\t33751615\t33751766\tDEL\n22\t34430612\t34430613\tALU;TSD=CAAATGGAACTTTT\n22\t35645163\t35646142\tDEL\n22\t37124157\t37124258\tDEL\n22\t37127073\t37127245\tDEL_ALU\n22\t37143062\t37147890\tDEL\n22\t37143105\t37144405\tDEL\n22\t42140478\t42140800\tDEL_ALU\n22\t42717347\t42719846\tDEL\n22\t43985160\t43985210\tDEL\n22\t44324605\t44324606\tLINE1;TSD=TGCAAAGGGCATTTTC\n22\t45252401\t45253090\tDEL\n22\t47696468\t47696864\tDEL\n22\t48645210\t48645528\tDEL_ALU\n22\t49077605\t49077889\tDEL\n22\t49425473\t49425474\tSVA;TSD=AAGAAAACTCCTTGCTC\n22\t49750824\t49750881\tDEL\n22\t50273378\t50273379\tALU;TSD=GTCTGGGCCTGTTT\n22\t50664005\t50664065\tDEL\nX\t61438\t61910\tDEL\nX\t163196\t182825\tDEL\nX\t192421\t212051\tDEL\nX\t195224\t198275\tDEL\nX\t209510\t221124\tDEL\nX\t288023\t290864\tDEL\nX\t351731\t353424\tDEL\nX\t358103\t418783\tDEL\nX\t369994\t394320\tDEL\nX\t378345\t384651\tDEL\nX\t399249\t399872\tDEL\nX\t434172\t438430\tDEL\nX\t582189\t589559\tDEL\nX\t626635\t627257\tDEL\nX\t634214\t643106\tDEL\nX\t650623\t650680\tDEL\nX\t724352\t725376\tDEL\nX\t743015\t749324\tDEL\nX\t743673\t746404\tDEL\nX\t768929\t772446\tDEL\nX\t780426\t828314\tDEL\nX\t785956\t787198\tDEL\nX\t793106\t810898\tDEL\nX\t820642\t824644\tDEL\nX\t824490\t825606\tDEL\nX\t828838\t829547\tDEL\nX\t869425\t872993\tDEL\nX\t909861\t911901\tDEL\nX\t910113\t910845\tDEL\nX\t928361\t980277\tDEL\nX\t944859\t946286\tDEL\nX\t945705\t948987\tDEL\nX\t1106672\t1107198\tDEL\nX\t1257090\t1257729\tDEL\nX\t1258087\t1258912\tDEL\nX\t1435871\t1438997\tDEL\nX\t1437891\t1438936\tDEL\nX\t1463758\t1467195\tDEL\nX\t1464989\t1467019\tDEL\nX\t1465463\t1466325\tDEL\nX\t1486390\t1495429\tDEL\nX\t1517468\t1525056\tDEL\nX\t1535211\t1535281\tDEL\nX\t1634919\t1638906\tDEL\nX\t1669235\t1669998\tDEL\nX\t1671131\t1676031\tDEL\nX\t1726628\t1732502\tDEL\nX\t1726816\t1727972\tDEL\nX\t1732247\t1735059\tDEL\nX\t1781542\t1785503\tDEL\nX\t1793123\t1796182\tDEL\nX\t1893003\t1895720\tDEL\nX\t1907793\t1925810\tDEL\nX\t1910842\t1914715\tDEL\nX\t1911061\t1911661\tDEL\nX\t1915938\t1934002\tDEL\nX\t1922909\t1926678\tDEL\nX\t1989033\t2002433\tDEL\nX\t2025532\t2028129\tDEL\nX\t2034620\t2035901\tDEL\nX\t2136964\t2138666\tDEL\nX\t2190036\t2191231\tDEL\nX\t2253258\t2260602\tDEL\nX\t2277451\t2278344\tDEL\nX\t2278503\t2285307\tDEL\nX\t2280430\t2304364\tDEL\nX\t2292543\t2294772\tDEL\nX\t2366748\t2399662\tDEL\nX\t2372137\t2377667\tDEL\nX\t2434707\t2435491\tDEL\nX\t2458444\t2459473\tDEL\nX\t2515310\t2516429\tDEL\nX\t2570094\t2589730\tDEL\nX\t2580429\t2581744\tDEL\nX\t2622736\t2624007\tDEL\nX\t2805121\t2805122\tLINE1;TSD=null\nX\t2813405\t2813728\tDEL_ALU\nX\t2901743\t2930026\tDEL\nX\t2917491\t2921551\tDEL\nX\t2947858\t2957494\tDUP\nX\t3011110\t3020851\tDEL\nX\t3064239\t3064240\tALU;TSD=AAAAGAAAAAGAAAGA\nX\t3150625\t3150627\tINS\nX\t3185852\t3187996\tDEL\nX\t3294909\t3295535\tDEL\nX\t3326031\t3329216\tDEL\nX\t3346301\t3351906\tDEL\nX\t3484352\t3558867\tDUP\nX\t3511628\t3511629\tLINE1;TSD=null\nX\t3599706\t3599707\tALU;TSD=TT\nX\t3606235\t3606653\tDEL\nX\t3609471\t3609526\tDEL\nX\t3687415\t3703428\tDEL\nX\t3703420\t3718736\tDEL\nX\t3731706\t3739682\tCNV\nX\t3735212\t3745961\tCNV\nX\t3879103\t3879104\tLINE1;TSD=null\nX\t3973863\t3973917\tDEL\nX\t3982951\t3990937\tDEL\nX\t4025923\t4025974\tDEL\nX\t4055996\t4055997\tALU;TSD=CAGTCGTATTTTT\nX\t4116403\t4116518\tDEL\nX\t4135699\t4135814\tDEL\nX\t4172222\t4172223\tALU;TSD=null\nX\t4233776\t4234935\tDEL\nX\t4234416\t4235092\tDEL\nX\t4236802\t4251464\tDEL\nX\t4327018\t4327019\tALU;TSD=CACCACAGTATTTATT\nX\t4379954\t4380006\tDEL\nX\t4382172\t4392070\tDEL\nX\t4659604\t4659605\tLINE1;TSD=TT\nX\t4718495\t4718496\tALU;TSD=null\nX\t4763225\t4782111\tDEL\nX\t4916708\t4916709\tALU;TSD=ACATCTTAGATTCTTCTT\nX\t4952559\t4956915\tDEL\nX\t4953842\t4953843\tALU;TSD=TTAAATGTTT\nX\t5055345\t5057501\tDEL\nX\t5159449\t5164202\tDEL\nX\t5206767\t5206833\tDEL\nX\t5361806\t5363114\tDEL\nX\t5449318\t5477338\tDUP\nX\t5481647\t5496689\tDEL\nX\t5538006\t5538065\tDEL\nX\t5570336\t5570680\tDEL_ALU\nX\t5653213\t5654540\tDEL\nX\t5700930\t5702199\tDEL\nX\t5736335\t5737554\tDEL\nX\t5737304\t5737475\tDEL\nX\t5739550\t5739918\tDEL\nX\t5770974\t5771039\tDEL\nX\t5781754\t5781755\tALU;TSD=TGCTGTATTGTTT\nX\t5913070\t5913342\tDEL\nX\t5981902\t6094156\tDEL\nX\t6032455\t6035561\tDEL\nX\t6098976\t6098977\tALU;TSD=null\nX\t6172055\t6253928\tDUP\nX\t6280643\t6280644\tALU;TSD=null\nX\t6289424\t6441948\tDUP\nX\t6304132\t6314759\tDEL\nX\t6304187\t6314903\tCNV\nX\t6338280\t6349405\tDUP\nX\t6450536\t6466660\tDUP\nX\t6546090\t6546182\tDEL\nX\t6553786\t6810498\tDEL\nX\t6587841\t6588003\tDEL\nX\t6595308\t7515400\tDEL\nX\t6726073\t6727444\tDEL\nX\t6744655\t6829033\tDEL\nX\t6805783\t6814540\tDEL\nX\t6920132\t6936637\tDEL\nX\t7167702\t7168924\tDEL\nX\t7208548\t7208549\tLINE1;TSD=null\nX\t7208889\t7211376\tDEL\nX\t7286803\t7311421\tDEL\nX\t7318688\t7495426\tDEL\nX\t7487044\t7586777\tCNV\nX\t7492456\t7492457\tLINE1;TSD=TTATTGTATGCTT\nX\t7501257\t7621795\tDUP\nX\t7579206\t7601961\tDEL\nX\t7619445\t7679429\tDEL\nX\t7711105\t7711106\tLINE1;TSD=null\nX\t7727698\t7727699\tALU;TSD=null\nX\t7761191\t7761192\tALU;TSD=null\nX\t7798705\t7798706\tLINE1;TSD=null\nX\t7838340\t7956724\tDEL\nX\t7932146\t7944040\tDEL\nX\t8024056\t8024057\tALU;TSD=AAAAAATCAAGAGTA\nX\t8084563\t8088175\tDEL\nX\t8114725\t8114726\tLINE1;TSD=null\nX\t8122956\t8123780\tDEL\nX\t8149287\t8149288\tALU;TSD=CTCATTAAATATTTTTT\nX\t8171202\t8179574\tDEL\nX\t8197961\t8349082\tDEL\nX\t8290447\t8335335\tDEL\nX\t8374863\t8456441\tDUP\nX\t8414134\t8429188\tDUP\nX\t8456074\t8456371\tDEL\nX\t8580581\t8580653\tDEL\nX\t8644055\t8681405\tDUP\nX\t8675984\t8676042\tDEL\nX\t8709374\t8710380\tDEL\nX\t8786514\t8788914\tDEL\nX\t8839235\t8857520\tDEL\nX\t8878375\t8878427\tDEL\nX\t8948436\t8948491\tDEL\nX\t8964831\t8967243\tDEL\nX\t9066905\t9066962\tDEL\nX\t9116092\t9116093\tALU;TSD=null\nX\t9135425\t9136655\tDEL\nX\t9174424\t9174425\tALU;TSD=GACGAGGTCTTTT\nX\t9385298\t9385299\tALU;TSD=null\nX\t9483027\t9483833\tDEL\nX\t9516444\t9516448\tINS\nX\t9553829\t9559221\tDEL\nX\t9577278\t9577279\tALU;TSD=null\nX\t9653719\t9653775\tDEL\nX\t9698247\t9698417\tDEL\nX\t9745809\t9749281\tDEL\nX\t9782060\t9794962\tDEL\nX\t9805013\t9805108\tDEL\nX\t9917061\t9917062\tLINE1;TSD=null\nX\t9957233\t9957234\tALU;TSD=null\nX\t9957923\t9963345\tDEL\nX\t10212230\t10216340\tDEL\nX\t10233280\t10233281\tLINE1;TSD=TTT\nX\t10240308\t10240386\tDEL\nX\t10346496\t10353586\tDEL\nX\t10346677\t10353846\tCNV\nX\t10457093\t10457911\tDEL\nX\t10528860\t10531081\tDEL\nX\t10552944\t10558410\tDEL\nX\t10571074\t10571075\tLINE1;TSD=null\nX\t10684958\t10699980\tDEL\nX\t10688701\t10697472\tCNV\nX\t10695649\t10701112\tDEL\nX\t10713733\t10713734\tALU;TSD=null\nX\t10853678\t10856143\tDEL\nX\t11010862\t11010997\tDEL\nX\t11055259\t11055260\tALU;TSD=null\nX\t11096392\t11096731\tDEL_ALU\nX\t11098427\t11098428\tALU;TSD=null\nX\t11182018\t11182019\tALU;TSD=AAAGAAATCAGCAGTC\nX\t11201717\t11201718\tALU;TSD=null\nX\t11628393\t11628394\tLINE1;TSD=AAGAAATTAAAACATTTT\nX\t11731977\t11731978\tLINE1;TSD=TTAGTTTACTCAATTCCATGTGGA\nX\t11830023\t11830113\tDEL\nX\t11885210\t11885211\tLINE1;TSD=null\nX\t11932522\t11932605\tDEL\nX\t12033329\t12033330\tALU;TSD=AAGAATACATGCTACC\nX\t12114294\t12115191\tDEL\nX\t12211890\t12211954\tDEL\nX\t12271780\t12271841\tDEL\nX\t12329843\t12329844\tALU;TSD=null\nX\t12380576\t12394209\tDEL\nX\t12384710\t12384711\tLINE1;TSD=null\nX\t12434234\t12436825\tDEL\nX\t12466523\t12483859\tDEL\nX\t12490969\t12492265\tDEL\nX\t13122187\t13125909\tDEL\nX\t13167642\t13167643\tALU;TSD=null\nX\t13205696\t13205801\tDEL\nX\t13216928\t13217230\tDEL\nX\t13244329\t13244330\tLINE1;TSD=null\nX\t13319978\t13319979\tALU;TSD=null\nX\t13419363\t13421005\tDEL\nX\t13420981\t13421696\tDEL\nX\t13506501\t13508250\tDEL\nX\t13697604\t13701494\tDEL\nX\t13824329\t13824330\tALU;TSD=null\nX\t13829184\t13947990\tDUP\nX\t13843175\t13843176\tALU;TSD=CTGTGTCTCTTCTT\nX\t13857169\t13863380\tDEL\nX\t13872906\t13875303\tDEL\nX\t13949683\t14156025\tDUP\nX\t14022258\t14022259\tALU;TSD=null\nX\t14110172\t14117365\tCNV\nX\t14110735\t14140814\tDEL\nX\t14147644\t14366811\tDUP\nX\t14152015\t14152016\tLINE1;TSD=TCTCTTTTCTTATT\nX\t14183240\t14183241\tALU;TSD=null\nX\t14240900\t14240961\tDEL\nX\t14406055\t14406111\tDEL\nX\t14432731\t14432732\tLINE1;TSD=TAGA\nX\t14596377\t14596378\tLINE1;TSD=null\nX\t14797755\t14799414\tDEL\nX\t14836235\t14836236\tALU;TSD=AAAATT\nX\t14917253\t14917254\tALU;TSD=GAACTAGAAAGTCTTTC\nX\t15050739\t15050740\tALU;TSD=AACAGCTTGCTTTT\nX\t15105544\t15114913\tDEL\nX\t15175768\t15175769\tLINE1;TSD=null\nX\t15189176\t15292014\tDUP\nX\t15238353\t15238611\tDEL\nX\t15246394\t15247968\tDEL\nX\t15347791\t15347956\tDEL\nX\t15355982\t15361333\tDUP\nX\t15419482\t15419483\tALU;TSD=null\nX\t15441026\t15441080\tDEL\nX\t15522467\t15573276\tDUP\nX\t15583582\t15583583\tALU;TSD=null\nX\t15626865\t15626866\tALU;TSD=AAAAGAGACATCTG\nX\t15664365\t15720388\tCNV\nX\t15839688\t15839741\tDEL\nX\t15975940\t15977108\tDEL\nX\t16312483\t16312707\tDEL\nX\t16360393\t16367091\tDEL\nX\t16364231\t16364349\tDEL\nX\t16368092\t16370986\tDEL\nX\t16412216\t16420740\tDEL\nX\t16427679\t16428212\tDEL_LINE1\nX\t16472172\t16479242\tDEL\nX\t16533395\t16533558\tDEL\nX\t16556845\t16556949\tDEL\nX\t16572843\t16572844\tALU;TSD=null\nX\t16596991\t16602321\tDEL\nX\t16666286\t16692414\tDUP\nX\t16694683\t16695230\tDEL\nX\t16935599\t16935600\tALU;TSD=null\nX\t16941924\t16941925\tALU;TSD=null\nX\t16955572\t16956564\tDEL\nX\t16976416\t16976417\tALU;TSD=null\nX\t17186016\t17195233\tDEL\nX\t17246632\t17497934\tDUP\nX\t17349514\t17349515\tALU;TSD=CAGTTGTATTTTT\nX\t17502753\t17502822\tDEL\nX\t17520616\t17520931\tDEL_ALU\nX\t17544375\t17544444\tDEL\nX\t17556037\t17556180\tDEL\nX\t17637426\t17638164\tDEL\nX\t18118310\t18120917\tDEL\nX\t18168241\t18180552\tDEL\nX\t18278753\t18280881\tDEL\nX\t18352754\t18352755\tLINE1;TSD=AGCCTTGTGTATTTTG\nX\t18353048\t18353340\tDEL\nX\t18397745\t18397880\tDEL\nX\t18399871\t18401829\tDEL\nX\t18436800\t18436958\tDEL\nX\t18436888\t18436962\tDEL\nX\t18468816\t18474273\tDEL\nX\t18847561\t18847562\tALU;TSD=null\nX\t18888689\t18957355\tDUP\nX\t18952948\t18952949\tALU;TSD=null\nX\t19042771\t19122398\tDUP\nX\t19073290\t19073980\tDEL\nX\t19127122\t19135848\tDEL\nX\t19283463\t19381414\tDUP\nX\t19357192\t19357193\tALU;TSD=AAAGAACTATTCCT\nX\t19374800\t19374936\tDEL\nX\t19411868\t19411952\tDEL\nX\t19435029\t19488491\tDUP\nX\t19466074\t19469129\tCNV\nX\t19470192\t19470468\tDEL\nX\t19540241\t19635153\tDUP\nX\t19635311\t19635621\tDEL\nX\t19829295\t19831199\tDEL\nX\t19946495\t19948330\tDEL\nX\t20138974\t20152179\tCNV\nX\t20174402\t20174403\tALU;TSD=null\nX\t20238579\t20238666\tDEL\nX\t20263983\t20265790\tDEL\nX\t20482662\t20486786\tDEL\nX\t20597650\t20666052\tDEL\nX\t20754401\t20754402\tALU;TSD=null\nX\t20815391\t20815496\tDEL\nX\t20860022\t20860146\tDEL\nX\t20886928\t20887286\tDEL\nX\t20923183\t20923184\tALU;TSD=AACTCCTAGGCTG\nX\t21015832\t21015833\tALU;TSD=AAAAAA\nX\t21016021\t21016078\tDEL\nX\t21254191\t21254243\tDEL\nX\t21286749\t21298165\tDEL\nX\t21300882\t21347108\tDEL\nX\t21322861\t21322917\tDEL\nX\t21357610\t21361255\tDEL\nX\t21453093\t21453094\tLINE1;TSD=null\nX\t21485800\t21485801\tALU;TSD=null\nX\t21800758\t21800920\tDEL\nX\t21865704\t21865705\tALU;TSD=TGGTATT\nX\t21884420\t21884421\tALU;TSD=GAAAAGTGTTCTAG\nX\t22035562\t22040699\tDUP\nX\t22037606\t22037703\tDEL\nX\t22339982\t22340043\tDEL\nX\t22365083\t22365084\tALU;TSD=GCTTCCTTTCTTTTT\nX\t22369769\t22369770\tLINE1;TSD=AAATACTTTTTTTTT\nX\t22377636\t22378087\tDEL\nX\t22388080\t22390197\tDEL\nX\t22492009\t22497620\tCNV\nX\t22492030\t22497716\tDEL\nX\t22504994\t22504995\tALU;TSD=null\nX\t22624887\t22630718\tDEL\nX\t22698248\t22921088\tDEL\nX\t22735316\t22747548\tCNV\nX\t22768204\t22768205\tLINE1;TSD=AGAAAGACAGGGCAGGGG\nX\t22855548\t22855837\tDEL_ALU\nX\t22941250\t22955053\tDEL\nX\t22947646\t22997060\tDEL\nX\t22960251\t22960252\tALU;TSD=null\nX\t23030827\t23068702\tDEL\nX\t23076960\t23082999\tDEL\nX\t23179256\t23179257\tLINE1;TSD=null\nX\t23202759\t23227700\tDEL\nX\t23384572\t23386277\tDEL\nX\t23475469\t23490638\tDUP\nX\t23600453\t23600454\tLINE1;TSD=GAAAAAGGCAACAGAC\nX\t23672647\t23675179\tDEL\nX\t23798222\t23798278\tDEL\nX\t23812115\t23813045\tDEL\nX\t23839396\t23846879\tDEL\nX\t23849563\t23864095\tDUP\nX\t23899994\t23906285\tDUP\nX\t24015943\t24022659\tDEL\nX\t24087236\t24087303\tDEL\nX\t24103576\t24103577\tSVA;TSD=null\nX\t24110987\t24116767\tDEL\nX\t24184274\t24185041\tDEL\nX\t24254806\t24256768\tDEL\nX\t24259047\t24276594\tDEL\nX\t24292700\t24293032\tDEL_ALU\nX\t24302880\t24304158\tDEL\nX\t24539415\t24540978\tDEL\nX\t24736870\t24738017\tDEL\nX\t24756029\t24756359\tDEL_ALU\nX\t24842821\t24842822\tALU;TSD=null\nX\t24877203\t24878541\tDEL\nX\t25159302\t25159303\tALU;TSD=null\nX\t25317339\t25318221\tDEL\nX\t25333375\t25336819\tDEL\nX\t25380271\t25393090\tDEL\nX\t25614920\t25616937\tDEL\nX\t25621786\t25623133\tDEL\nX\t25658706\t25658969\tDEL\nX\t25743848\t25743910\tDEL\nX\t25781546\t25785920\tDEL\nX\t25845880\t25845966\tDEL\nX\t25889622\t25889623\tLINE1;TSD=null\nX\t25903910\t25903911\tALU;TSD=null\nX\t25947939\t25948273\tDEL_ALU\nX\t25978463\t25978464\tALU;TSD=AAATTTATTCCTAGG\nX\t26001405\t26003820\tDEL\nX\t26167454\t26167455\tALU;TSD=AAAAATACCTCTCCAC\nX\t26182841\t26213475\tCNV\nX\t26363143\t26366293\tDEL\nX\t26415770\t26415771\tALU;TSD=null\nX\t26481460\t26481461\tALU;TSD=null\nX\t26662515\t26662751\tDEL\nX\t26662877\t26664888\tDEL\nX\t26732761\t26737387\tDEL\nX\t26810528\t26821593\tDUP\nX\t26922374\t26922375\tSVA;TSD=AAGCATTCTCTA\nX\t26941756\t26941757\tALU;TSD=null\nX\t26974000\t27038949\tDEL\nX\t27031915\t27032235\tDEL\nX\t27037894\t27038845\tDEL\nX\t27078143\t27081780\tDEL\nX\t27093160\t27098209\tDEL\nX\t27262924\t27264660\tDEL\nX\t27438780\t27445808\tDEL\nX\t27501908\t27501909\tALU;TSD=null\nX\t27556908\t27565422\tDEL\nX\t27709402\t27709403\tLINE1;TSD=null\nX\t27714737\t27716219\tDEL\nX\t27805772\t27805773\tALU;TSD=null\nX\t27818932\t27820534\tDEL\nX\t27831386\t27831387\tALU;TSD=null\nX\t27846265\t27846266\tLINE1;TSD=null\nX\t27901141\t27908024\tDEL\nX\t27921604\t27923920\tDEL\nX\t27965086\t27978103\tDEL\nX\t28179426\t28274555\tDUP\nX\t28201364\t28308110\tDUP\nX\t28219334\t28221818\tDEL\nX\t28299044\t28300619\tDEL\nX\t28340101\t28340102\tALU;TSD=null\nX\t28446509\t28446510\tALU;TSD=TCAGCTTTCTT\nX\t28520775\t28526025\tDEL\nX\t28684443\t28688832\tDEL\nX\t28697847\t28698607\tDEL\nX\t28870137\t28876943\tDEL\nX\t28978946\t28979002\tDEL\nX\t29002940\t29009590\tDEL\nX\t29033920\t29034025\tDEL\nX\t29062877\t29062878\tALU;TSD=null\nX\t29073909\t29074235\tDEL\nX\t29087035\t29087280\tDEL\nX\t29121653\t29121654\tALU;TSD=AAGAAAACACTGGGG\nX\t29221641\t29228745\tDEL\nX\t29268334\t29268335\tLINE1;TSD=null\nX\t29270196\t29270197\tALU;TSD=null\nX\t29341826\t29341882\tDEL\nX\t29372132\t29372133\tLINE1;TSD=AAAAAATA\nX\t29535983\t29535984\tALU;TSD=null\nX\t29556712\t29556783\tDEL\nX\t29600102\t29609129\tDEL\nX\t29602048\t29602049\tLINE1;TSD=null\nX\t29625062\t29625063\tALU;TSD=null\nX\t29736350\t29738935\tDEL\nX\t29817894\t29817895\tLINE1;TSD=null\nX\t30021349\t30023422\tDEL\nX\t30046608\t30057664\tDEL\nX\t30111950\t30111951\tLINE1;TSD=null\nX\t30209790\t30209791\tALU;TSD=null\nX\t30218098\t30218099\tALU;TSD=null\nX\t30242851\t30243073\tDEL\nX\t30299183\t30308794\tDUP\nX\t30313490\t30317409\tDEL\nX\t30347766\t30348599\tDEL\nX\t30501131\t30577809\tDUP\nX\t30559712\t30560013\tDEL\nX\t30622593\t30625691\tDEL\nX\t30653506\t30658757\tDEL\nX\t30665974\t30665975\tALU;TSD=CAATATTCATTCATT\nX\t30676516\t30677940\tDEL\nX\t30820402\t30820457\tDEL\nX\t30821442\t30821714\tDEL\nX\t30904726\t31026592\tDUP\nX\t31000874\t31006590\tDEL\nX\t31081309\t31085150\tDEL\nX\t31155691\t31157804\tDEL\nX\t31185139\t31185973\tDEL\nX\t31275320\t31275321\tALU;TSD=AGAAGTGGGCGTCTC\nX\t31346366\t31346887\tDEL\nX\t31370330\t31370331\tALU;TSD=AAGAATGTGATACC\nX\t31379318\t31379319\tALU;TSD=CTAGCTTCCCTTTTTT\nX\t31418407\t31418507\tDEL\nX\t31470360\t31470361\tALU;TSD=AAAAAAATAGCA\nX\t31505930\t31506850\tDEL\nX\t31531698\t31548491\tDUP\nX\t31750354\t31750355\tLINE1;TSD=null\nX\t31764309\t31779911\tDEL\nX\t31811560\t31812145\tDEL\nX\t31823711\t31828029\tDEL\nX\t32001086\t32001087\tALU;TSD=TCAGAGCTTTTGTT\nX\t32038514\t32038515\tLINE1;TSD=null\nX\t32068702\t32078442\tDEL\nX\t32103731\t32103858\tDEL\nX\t32226507\t32226508\tLINE1;TSD=null\nX\t32235660\t32235835\tDEL\nX\t32298048\t32298151\tDEL\nX\t32332915\t32333290\tDEL\nX\t32354096\t32354146\tDEL\nX\t32379285\t32379286\tLINE1;TSD=null\nX\t32391263\t32391578\tDEL\nX\t32423300\t32425758\tDEL\nX\t32430304\t32431577\tDEL\nX\t32430687\t32430688\tLINE1;TSD=null\nX\t32468501\t32468932\tDEL\nX\t32550298\t32553844\tDEL\nX\t32679357\t32679358\tALU;TSD=null\nX\t32682318\t32684596\tDEL\nX\t32701649\t32702687\tDEL\nX\t32721051\t32810353\tDEL\nX\t32732633\t32739759\tDEL\nX\t32738366\t32748132\tDEL\nX\t32745923\t32745924\tALU;TSD=AAAATATATTCCAATTCACTTT\nX\t32761413\t32827319\tDUP\nX\t32767842\t32805506\tCNV\nX\t32799269\t32799270\tLINE1;TSD=null\nX\t32857913\t32861015\tDEL\nX\t32882429\t32884150\tDEL\nX\t32886350\t32886923\tDEL\nX\t32919526\t32921434\tDEL\nX\t32929263\t32969890\tDEL\nX\t32987321\t32989080\tDEL\nX\t33008942\t33009462\tDEL\nX\t33135645\t33264774\tDUP\nX\t33208976\t33209125\tDEL\nX\t33209489\t33216353\tDEL\nX\t33302850\t33302851\tALU;TSD=AAAAATCATC\nX\t33331251\t33487391\tDUP\nX\t33399054\t33399055\tLINE1;TSD=null\nX\t33599548\t33666882\tDUP\nX\t33653319\t33801436\tDUP\nX\t33666126\t33727911\tCNV\nX\t33712810\t33713294\tDEL\nX\t33766060\t33766061\tALU;TSD=null\nX\t33838634\t33843183\tCNV\nX\t34014937\t34015879\tDEL\nX\t34042872\t34073166\tDEL\nX\t34059695\t34059766\tDEL\nX\t34153303\t34155879\tDEL\nX\t34186496\t34190012\tDEL\nX\t34242454\t34242455\tALU;TSD=AAAGAAATATG\nX\t34293483\t34293484\tALU;TSD=GTGTTTCTT\nX\t34386583\t34401708\tDEL\nX\t34438376\t34443008\tDEL\nX\t34464346\t34464347\tALU;TSD=AAAAAACTTCCATGA\nX\t34531540\t34531541\tLINE1;TSD=null\nX\t34747567\t34747568\tLINE1;TSD=AAAAAGATGTTTTCC\nX\t34858179\t34875400\tDUP\nX\t34942088\t34942089\tLINE1;TSD=null\nX\t34957236\t34957763\tDEL\nX\t34987883\t34987884\tLINE1;TSD=null\nX\t34992622\t34992623\tLINE1;TSD=AACTC\nX\t35012584\t35012585\tALU;TSD=TAGACTATATTCTT\nX\t35027353\t35027404\tDEL\nX\t35028103\t35028104\tALU;TSD=AAAAACGGCAATGAG\nX\t35064121\t35064122\tLINE1;TSD=TAAAACTGCATTTCC\nX\t35100607\t35100608\tALU;TSD=null\nX\t35266960\t35266961\tALU;TSD=null\nX\t35308066\t35484789\tDUP\nX\t35323501\t35324110\tDEL\nX\t35391199\t35391200\tLINE1;TSD=null\nX\t35419176\t35419177\tALU;TSD=TATTT\nX\t35441649\t35445201\tCNV\nX\t35441717\t35445295\tDEL\nX\t35549079\t35553722\tDEL\nX\t35627442\t35634397\tDEL\nX\t35655992\t35655993\tALU;TSD=null\nX\t35671820\t35671821\tALU;TSD=null\nX\t35710355\t35710586\tDEL\nX\t35714095\t35716002\tDEL\nX\t35727018\t35735906\tDEL\nX\t35857036\t35878354\tDEL\nX\t35876507\t35876866\tDEL\nX\t35879047\t35891337\tDUP\nX\t35901427\t35903509\tDEL\nX\t35987025\t35987026\tALU;TSD=null\nX\t36036371\t36037056\tDEL\nX\t36292921\t36293190\tINS\nX\t36352693\t36352694\tALU;TSD=null\nX\t36475654\t36476549\tDEL\nX\t36512038\t36512109\tDEL\nX\t36591669\t36764601\tDUP\nX\t36644458\t36650082\tDUP\nX\t36667849\t36737862\tDEL\nX\t36743043\t36743359\tDEL\nX\t36743057\t36743108\tDEL\nX\t36763991\t36773403\tDUP\nX\t36907823\t36933646\tDEL\nX\t36983092\t36988457\tDEL\nX\t37031097\t37034385\tCNV\nX\t37037673\t37037735\tDEL\nX\t37066160\t37067856\tDEL\nX\t37195798\t37195799\tLINE1;TSD=null\nX\t37242570\t37242571\tLINE1;TSD=GGATC\nX\t37291685\t37316024\tDUP\nX\t37354638\t37368276\tCNV\nX\t37436552\t37436553\tLINE1;TSD=null\nX\t37574091\t37579372\tDEL\nX\t37701641\t37701692\tDEL\nX\t37813162\t37855992\tDUP\nX\t37974440\t37974761\tDEL_ALU\nX\t37986665\t37986738\tDEL\nX\t38097551\t38097552\tLINE1;TSD=null\nX\t38386513\t38387335\tDEL\nX\t38485618\t38584308\tDUP\nX\t38561080\t38561081\tLINE1;TSD=null\nX\t38584427\t38588518\tCNV\nX\t38590883\t38631587\tDUP\nX\t38752392\t38755014\tDEL\nX\t38903559\t38904326\tDEL\nX\t38948202\t38957151\tDEL\nX\t39002551\t39002552\tLINE1;TSD=null\nX\t39397358\t39397360\tINS\nX\t39642028\t39654111\tDUP\nX\t39939333\t39939334\tALU;TSD=AAGAAAAGGATGAGGGAAG\nX\t40092270\t40094867\tDEL\nX\t40371270\t40375553\tDEL\nX\t40459354\t40459424\tDEL\nX\t40461270\t40461776\tDEL\nX\t40465562\t40465732\tDEL\nX\t40495454\t40495512\tDEL\nX\t40505174\t40505498\tDEL_ALU\nX\t40652511\t40652512\tALU;TSD=AAGGAGACTGTTTTT\nX\t40682531\t40682532\tALU;TSD=AAAGAAATCAATATACT\nX\t40932142\t40932816\tDEL\nX\t41057619\t41057684\tDEL\nX\t41101152\t41102217\tDEL\nX\t41159879\t41162350\tDEL\nX\t41214287\t41215620\tDEL\nX\t41339020\t41361501\tDUP\nX\t41343728\t41345820\tDEL\nX\t41431520\t41431837\tDEL\nX\t41571711\t41572021\tDEL\nX\t41646759\t41646859\tDEL\nX\t41866985\t41867574\tDEL\nX\t41921397\t41921475\tDEL\nX\t42040893\t42053063\tDUP\nX\t42060699\t42284712\tDUP\nX\t42165210\t42165211\tALU;TSD=CTGCCTTTTACTTTT\nX\t42204450\t42208025\tDEL\nX\t42512293\t42513869\tDEL\nX\t42601572\t42601573\tLINE1;TSD=null\nX\t42747825\t42760643\tDUP\nX\t42976450\t42976451\tSVA;TSD=null\nX\t42995315\t43000086\tDEL\nX\t43005613\t43016167\tDEL\nX\t43010555\t43010674\tDEL\nX\t43017706\t43017912\tDEL\nX\t43090191\t43090192\tALU;TSD=AGAAAATGGGCAA\nX\t43122185\t43125636\tDEL\nX\t43612929\t43613072\tDEL\nX\t43630876\t43630877\tLINE1;TSD=null\nX\t43669193\t43669515\tDEL_ALU\nX\t43844741\t43845580\tDEL\nX\t43886095\t43886212\tDEL\nX\t43944831\t43944832\tLINE1;TSD=null\nX\t43944831\t43947288\tDEL\nX\t44058433\t44062832\tCNV\nX\t44059561\t44062635\tDEL\nX\t44064123\t44064124\tALU;TSD=null\nX\t44331448\t44331580\tDEL\nX\t44336413\t44341767\tDEL\nX\t44365819\t44384141\tCNV\nX\t44379815\t44381379\tDEL\nX\t44388485\t44419630\tCNV\nX\t44392587\t44427391\tDEL\nX\t44427162\t44428047\tDEL\nX\t44429385\t44446520\tDUP\nX\t44435597\t44437774\tDEL\nX\t44475667\t44479908\tDEL\nX\t44479867\t44486656\tDEL\nX\t44497023\t44511860\tDUP\nX\t44519535\t44526696\tDEL\nX\t44522080\t44526656\tCNV\nX\t44561503\t44561504\tALU;TSD=TCCACTTTTT\nX\t44564146\t44574565\tDUP\nX\t44578565\t44578566\tSVA;TSD=AACATCCATCACC\nX\t44611708\t44613745\tDEL\nX\t44642003\t44647911\tDUP\nX\t44715417\t44718330\tDEL\nX\t44724299\t44726062\tDEL\nX\t44908140\t44908141\tALU;TSD=CTCAAGTTACTTTTTT\nX\t45016247\t45017614\tDEL\nX\t45185289\t45205582\tDEL\nX\t45208735\t45214687\tDEL\nX\t45289029\t45292881\tDEL\nX\t45318884\t45318885\tALU;TSD=AATGTTGGATTTT\nX\t45423273\t45423945\tDEL\nX\t45789392\t45789393\tLINE1;TSD=null\nX\t45817059\t45817060\tALU;TSD=null\nX\t45856436\t45857291\tDEL\nX\t46347170\t46347173\tINS\nX\t46355358\t46356852\tDEL\nX\t46414700\t46414701\tLINE1;TSD=null\nX\t46661728\t46661810\tDEL\nX\t46707327\t46707377\tDEL\nX\t46794577\t46795620\tDEL\nX\t47093162\t47093215\tDEL\nX\t47117440\t47154304\tDEL\nX\t47183859\t47183860\tSVA;TSD=GACAGGGACAACTCTT\nX\t47218338\t47224549\tDUP\nX\t47329162\t47335634\tDEL\nX\t47353120\t47353759\tDEL\nX\t47366180\t47381717\tDEL\nX\t47401622\t47410370\tDEL\nX\t47708097\t47708098\tALU;TSD=CAAAATCCAAAACTTTTT\nX\t47771488\t47771489\tALU;TSD=null\nX\t47829457\t47834256\tDEL\nX\t47862951\t48003688\tCNV\nX\t47999721\t48056440\tCNV\nX\t48047631\t48086232\tCNV\nX\t48061368\t48061555\tDEL\nX\t48116282\t48165949\tDUP\nX\t48125593\t48125748\tDEL\nX\t48127600\t48127762\tDEL\nX\t48169696\t48215049\tDUP\nX\t48449189\t48449317\tDEL\nX\t48500496\t48502929\tDEL\nX\t48623509\t48626754\tDEL\nX\t48724413\t48743697\tDEL\nX\t48945168\t48948889\tDEL\nX\t48952964\t48965729\tCNV\nX\t48984944\t48986890\tDEL\nX\t49161314\t49177223\tCNV\nX\t49368756\t49377573\tDUP\nX\t49381978\t49381979\tLINE1;TSD=null\nX\t49382036\t49385684\tDEL\nX\t49384996\t49393308\tDEL\nX\t49405260\t49405467\tDEL\nX\t49411799\t49411800\tALU;TSD=CAGGAAAAGCTCTTT\nX\t49628078\t49628804\tDEL\nX\t49945252\t49946429\tDEL\nX\t50387143\t50396588\tDEL\nX\t50640899\t50640900\tALU;TSD=null\nX\t51131680\t51136610\tDEL\nX\t51259150\t51276086\tDUP\nX\t51326952\t51327067\tDEL\nX\t51373371\t51373521\tDEL\nX\t51376938\t51377072\tDEL\nX\t51551811\t51553424\tDEL\nX\t51693785\t51693786\tALU;TSD=AAAAGCTGTG\nX\t51762707\t51782852\tDUP\nX\t51784227\t51853863\tDUP\nX\t51856584\t51864982\tDEL\nX\t52651001\t52693039\tDUP\nX\t52693577\t52874118\tDUP\nX\t52887623\t52890080\tDEL\nX\t52961285\t52961607\tDEL_ALU\nX\t53135119\t53137163\tDEL\nX\t53137316\t53140138\tDEL\nX\t53319071\t53320350\tDEL\nX\t53394360\t53394361\tALU;TSD=null\nX\t53478093\t53491686\tDEL\nX\t53481193\t53482847\tDEL\nX\t53496416\t53499888\tDEL\nX\t53513441\t53520776\tDEL\nX\t53772344\t53778301\tDEL\nX\t53781934\t53808203\tDEL\nX\t53792163\t53792218\tDEL\nX\t53800902\t53801312\tDEL\nX\t53819547\t53820294\tDEL\nX\t53820721\t53862221\tDUP\nX\t53865806\t53872862\tDEL\nX\t53996020\t53998329\tDEL\nX\t54310880\t54311004\tDEL\nX\t54395463\t54407670\tDEL\nX\t54576156\t54576222\tDEL\nX\t54639392\t54639573\tDEL\nX\t54855750\t54865350\tDEL\nX\t54862268\t54862603\tDEL\nX\t54884545\t54907315\tDEL\nX\t54925379\t54925430\tDEL\nX\t54982950\t54984213\tDEL\nX\t55107915\t55243227\tDEL\nX\t55115353\t55123489\tDEL\nX\t55165288\t55170174\tDEL\nX\t55174560\t55174561\tALU;TSD=null\nX\t55175838\t55175839\tLINE1;TSD=null\nX\t55507944\t55511893\tDUP\nX\t55585160\t55585161\tLINE1;TSD=ATATATTCTTGTTTTCTT\nX\t55658310\t55661463\tDEL\nX\t55666958\t55666959\tALU;TSD=null\nX\t55691019\t55695082\tDEL\nX\t55702401\t55709877\tDEL\nX\t55721534\t55722200\tDEL\nX\t55801775\t55808928\tDEL\nX\t55978161\t55981434\tDEL\nX\t56079069\t56102670\tCNV\nX\t56079467\t56197996\tDUP\nX\t56263746\t56293622\tDUP\nX\t56284324\t56375486\tDUP\nX\t56323765\t56329494\tDEL\nX\t56376100\t56380217\tDEL\nX\t56404702\t56404703\tLINE1;TSD=null\nX\t56425378\t56480257\tCNV\nX\t56454806\t56476291\tCNV\nX\t56456104\t56463112\tDEL\nX\t56458535\t56476593\tDEL\nX\t56468360\t56475190\tCNV\nX\t56469196\t56477683\tDEL\nX\t56471419\t56501194\tDUP\nX\t56485624\t56514805\tDUP\nX\t56495410\t56516794\tDUP\nX\t56660990\t56672840\tDEL\nX\t56736234\t56761933\tDUP\nX\t56870760\t56880191\tDEL\nX\t56875182\t56875284\tDEL\nX\t56945446\t56956844\tDEL\nX\t56981660\t56982346\tDEL\nX\t57042857\t57045761\tDEL\nX\t57237328\t57261003\tDEL\nX\t57273089\t57349083\tDUP\nX\t57384886\t57391046\tDEL\nX\t57514064\t57514155\tDEL\nX\t57730485\t57749071\tCNV\nX\t57731363\t57753009\tCNV\nX\t57734979\t57751980\tCNV\nX\t57737171\t57743177\tDEL\nX\t57740875\t57781019\tCNV\nX\t57745725\t57764368\tCNV\nX\t57806452\t57806453\tLINE1;TSD=CCAAGTTCTTATTT\nX\t57834989\t58009604\tDEL\nX\t57909647\t57976974\tDUP\nX\t58009791\t58039657\tDUP\nX\t58064983\t58064984\tLINE1;TSD=CCAATCGCCATTTTCT\nX\t58162791\t58162792\tLINE1;TSD=AGAAACATCTGG\nX\t58165738\t58200427\tDEL\nX\t58195069\t58200490\tDEL\nX\t58284542\t58285918\tDEL\nX\t58286833\t58289290\tDEL\nX\t58286921\t58288015\tDEL\nX\t58366303\t58371866\tDEL\nX\t58449138\t58463235\tDEL\nX\t58474022\t58484512\tDEL\nX\t58477164\t58483528\tDEL\nX\t58491462\t58494023\tDEL\nX\t58506835\t58527574\tDEL\nX\t58546993\t58551258\tDEL\nX\t58547609\t58547610\tALU;TSD=null\nX\t61798850\t61815100\tDEL\nX\t61801381\t61806543\tDEL\nX\t61802566\t61811091\tDEL\nX\t61816697\t61852694\tDEL\nX\t61817407\t61827370\tDEL\nX\t61820779\t61822764\tDEL\nX\t61833463\t61839009\tDEL\nX\t61834088\t61852788\tDEL\nX\t61840897\t61843617\tDEL\nX\t61852945\t61856185\tDEL\nX\t61854719\t61854720\tLINE1;TSD=AAAAAG\nX\t61860120\t61869706\tDEL\nX\t61866963\t61903408\tDEL\nX\t61868490\t61873518\tDEL\nX\t61892192\t61898771\tDEL\nX\t61893933\t61896986\tDEL\nX\t61935752\t62091060\tCNV\nX\t61951926\t61954115\tDEL\nX\t61982511\t61994437\tDEL\nX\t61988614\t62000171\tDEL\nX\t62017603\t62026232\tDEL\nX\t62060592\t62060593\tALU;TSD=null\nX\t62082866\t62082867\tLINE1;TSD=null\nX\t62106904\t62106905\tALU;TSD=null\nX\t62116559\t62137852\tDEL\nX\t62205645\t62226504\tDUP\nX\t62206160\t62276540\tDUP\nX\t62215449\t62217589\tDEL\nX\t62242859\t62246525\tDEL\nX\t62257804\t62284188\tDUP\nX\t62265030\t62287973\tDEL\nX\t62288913\t62469720\tDUP\nX\t62294712\t62310650\tDEL\nX\t62294772\t62310640\tCNV\nX\t62453551\t62508791\tDUP\nX\t62477056\t62510281\tDUP\nX\t62577933\t62587869\tDEL\nX\t62637668\t62652377\tDUP\nX\t62685751\t62694646\tDEL\nX\t62704919\t62705019\tDEL\nX\t62951213\t62951461\tDEL\nX\t62959740\t62959741\tLINE1;TSD=CTTAAAACTCTT\nX\t62975795\t62977144\tDEL\nX\t63021205\t63021206\tALU;TSD=null\nX\t63035864\t63035865\tALU;TSD=null\nX\t63044083\t63051019\tDEL\nX\t63097843\t63097991\tDEL\nX\t63127039\t63127378\tDEL\nX\t63164414\t63164516\tDEL\nX\t63229090\t63244159\tDEL\nX\t63387854\t63387904\tDEL\nX\t63440816\t63440817\tALU;TSD=AAAAAACCAAGGTATT\nX\t63537694\t63543054\tDEL\nX\t63538179\t63542761\tCNV\nX\t63627966\t63635547\tDEL\nX\t63670635\t63675332\tDEL\nX\t63716412\t63735365\tDUP\nX\t63722121\t63737562\tDUP\nX\t63819125\t63820418\tDEL\nX\t64004962\t64062235\tDEL\nX\t64039290\t64046207\tDEL\nX\t64074221\t64074222\tALU;TSD=AAGAGTTCAGCTGGA\nX\t64085142\t64097518\tDEL\nX\t64100990\t64109040\tDUP\nX\t64104128\t64108392\tDUP\nX\t64109687\t64114033\tDEL\nX\t64240820\t64241709\tDEL\nX\t64284527\t64292263\tDEL\nX\t64379708\t64383550\tDEL\nX\t64393277\t64421874\tDEL\nX\t64433941\t64433942\tLINE1;TSD=null\nX\t64487672\t64487673\tALU;TSD=null\nX\t64506973\t64507068\tDEL\nX\t64589620\t64593101\tDEL\nX\t64615650\t64615703\tDEL\nX\t64802874\t64808545\tDEL\nX\t64842924\t64844507\tDEL\nX\t64905469\t64921930\tDUP\nX\t65020867\t65044217\tDEL\nX\t65067869\t65093100\tDUP\nX\t65079528\t65079612\tDEL\nX\t65113960\t65114553\tDEL\nX\t65113961\t65114415\tDEL\nX\t65542317\t65551912\tDEL\nX\t65578913\t65582755\tDEL\nX\t65664331\t65664404\tDEL\nX\t65771494\t65864920\tDUP\nX\t65772935\t65794679\tDUP\nX\t65777788\t65785930\tDUP\nX\t65786559\t65789636\tDEL\nX\t65806480\t65827290\tDUP\nX\t65820729\t65872395\tDUP\nX\t65916848\t65916914\tDEL\nX\t65918627\t65918699\tDEL\nX\t65936095\t65960056\tDUP\nX\t65967173\t65967515\tDEL_ALU\nX\t66028246\t66029072\tDEL\nX\t66048235\t66048300\tDEL\nX\t66053601\t66060370\tDEL\nX\t66064302\t66074634\tDEL\nX\t66103777\t66103901\tDEL\nX\t66107357\t66113165\tDEL\nX\t66150902\t66190048\tDUP\nX\t66180881\t66186339\tDEL\nX\t66318264\t66318265\tALU;TSD=null\nX\t66333799\t66333972\tDEL\nX\t66412590\t66443395\tDUP\nX\t66456716\t66457683\tDEL\nX\t66483120\t66484333\tDEL\nX\t66531901\t66537807\tDEL\nX\t66636586\t66702070\tCNV\nX\t66661663\t66732568\tDUP\nX\t66670052\t66694452\tDEL\nX\t66879897\t66924329\tDEL\nX\t66993442\t66994080\tDEL\nX\t67058941\t67059021\tDEL\nX\t67080365\t67082022\tDEL\nX\t67085421\t67085422\tALU;TSD=null\nX\t67123822\t67130299\tDEL\nX\t67135096\t67135182\tDEL\nX\t67141679\t67141784\tDEL\nX\t67165589\t67192501\tDUP\nX\t67175728\t67176842\tDEL\nX\t67187590\t67214120\tDUP\nX\t67232268\t67246232\tDEL\nX\t67545427\t67545428\tALU;TSD=null\nX\t67578264\t67634990\tCNV\nX\t67667912\t67670000\tDEL\nX\t67736928\t67737119\tDEL\nX\t67766474\t67772799\tDUP\nX\t67815297\t67815354\tDEL\nX\t67827481\t67876995\tDUP\nX\t67841422\t67843680\tDEL\nX\t67875701\t67877292\tDEL\nX\t67898559\t67903078\tDEL\nX\t67934875\t67934950\tDEL\nX\t68045255\t68045436\tDEL\nX\t68319997\t68321839\tDEL\nX\t68330681\t68330682\tLINE1;TSD=null\nX\t68561459\t68565338\tDEL\nX\t68807480\t68815695\tDEL\nX\t68861391\t68861392\tLINE1;TSD=null\nX\t68874026\t68885739\tDEL\nX\t69003638\t69020483\tDEL\nX\t69011306\t69020131\tCNV\nX\t69023049\t69026269\tDEL\nX\t69200591\t69201379\tDEL\nX\t69239350\t69239403\tDEL\nX\t69303060\t69303274\tDEL\nX\t69419904\t69448773\tDUP\nX\t69427429\t69446696\tCNV\nX\t69438219\t69446728\tDEL\nX\t69462122\t69470996\tDUP\nX\t69731357\t69734204\tDEL\nX\t69842811\t69842876\tDEL\nX\t70034916\t70036229\tDEL\nX\t70102169\t70102170\tLINE1;TSD=null\nX\t70122996\t70123933\tDEL\nX\t70137290\t70139954\tDEL\nX\t70434539\t70438224\tDUP\nX\t70543854\t70544799\tDEL\nX\t71022532\t71050874\tCNV\nX\t71064563\t71157334\tCNV\nX\t71312620\t71312621\tLINE1;TSD=AACTGCATTAATACTTCT\nX\t71357156\t71357534\tDEL\nX\t71408878\t71416241\tDEL\nX\t71430729\t71441329\tDEL\nX\t71860788\t71861447\tDEL\nX\t72238298\t72238299\tALU;TSD=null\nX\t72297660\t72334425\tDUP\nX\t72343223\t72343224\tLINE1;TSD=null\nX\t72423763\t72423821\tDEL\nX\t72581020\t72581450\tDEL\nX\t72848529\t72856483\tDEL\nX\t72992805\t72998981\tDEL\nX\t72997307\t72997441\tDEL\nX\t73004974\t73094907\tDUP\nX\t73022777\t73022848\tDEL\nX\t73089711\t73090785\tDEL\nX\t73166080\t73169831\tDEL\nX\t73172802\t73176731\tDEL\nX\t73194117\t73196661\tDEL\nX\t73400777\t73400871\tDEL\nX\t73426252\t73426466\tDEL\nX\t73496220\t73496586\tDEL\nX\t73516948\t73518402\tDEL\nX\t73550319\t73550387\tDEL\nX\t73816785\t73817680\tDEL\nX\t74154573\t74154647\tDEL\nX\t74216946\t74216947\tALU;TSD=GCTTTTCTAGTTCTTTT\nX\t74249631\t74249755\tDEL\nX\t74360376\t74360377\tALU;TSD=AAGAGATCTTT\nX\t74457229\t74485658\tDUP\nX\t74464226\t74464387\tDEL\nX\t74480626\t74530298\tDUP\nX\t74599737\t74599800\tDEL\nX\t74885259\t74885260\tALU;TSD=null\nX\t74889445\t74904218\tDUP\nX\t75111521\t75111583\tDEL\nX\t75212778\t75222868\tCNV\nX\t75277077\t75366938\tDEL\nX\t75301385\t75313459\tCNV\nX\t75316532\t75316821\tDEL\nX\t75328210\t75344469\tCNV\nX\t75345754\t75482545\tDUP\nX\t75418334\t75418386\tDEL\nX\t75493658\t75515099\tCNV\nX\t75493696\t75514939\tDEL\nX\t75504175\t75504302\tDEL\nX\t75777695\t75777807\tDEL\nX\t75801323\t75841719\tCNV\nX\t75803073\t75842039\tDEL\nX\t75821429\t75824703\tDEL\nX\t76004940\t76120864\tDEL\nX\t76030109\t76030285\tDEL\nX\t76090768\t76094679\tDEL\nX\t76123370\t76145606\tDEL\nX\t76170971\t76171308\tDEL\nX\t76195189\t76195190\tLINE1;TSD=AAAA\nX\t76539575\t76539653\tDEL\nX\t76574661\t76574662\tALU;TSD=AAAAAAACAAACACTGC\nX\t76764888\t76769437\tDEL\nX\t76845417\t76849135\tDEL\nX\t76863558\t76867044\tDEL\nX\t76881496\t76881558\tDEL\nX\t77013644\t77029895\tDEL\nX\t77055184\t77085679\tDUP\nX\t77121360\t77123888\tDEL\nX\t77515999\t77524077\tDEL\nX\t77696852\t77697450\tDEL_LINE1\nX\t77757016\t77757105\tDEL\nX\t77906416\t77910911\tDEL\nX\t77912083\t77912156\tDEL\nX\t77922691\t77922926\tDEL\nX\t77959041\t77959098\tDEL\nX\t78024911\t78025278\tDEL\nX\t78047643\t78047644\tALU;TSD=GCACCAAAGCTTTTT\nX\t78151926\t78153773\tDEL\nX\t78192990\t78193423\tDEL\nX\t78259192\t78259193\tALU;TSD=null\nX\t78415647\t78415648\tALU;TSD=CAAGAAAAATGAGTCTTT\nX\t78467635\t78467721\tDEL\nX\t78534143\t78534144\tALU;TSD=null\nX\t78590426\t78590497\tDEL\nX\t78724855\t78724910\tDEL\nX\t78738314\t78738921\tDEL\nX\t78863969\t78921419\tDUP\nX\t78921957\t78926007\tDEL\nX\t78927122\t78946894\tDUP\nX\t78946447\t78948827\tDEL\nX\t78979090\t78989060\tDEL\nX\t78997248\t79021023\tCNV\nX\t79004398\t79008984\tDEL\nX\t79100775\t79104606\tDEL\nX\t79120207\t79120284\tDEL\nX\t79207268\t79207347\tDEL\nX\t79222117\t79222290\tDEL\nX\t79238236\t79238301\tDEL\nX\t79263134\t79303934\tDUP\nX\t79315102\t79316246\tDEL\nX\t79316070\t79324583\tDEL\nX\t79318102\t79325578\tCNV\nX\t79332230\t79336825\tDEL\nX\t79365292\t79367452\tDEL\nX\t79484828\t79484829\tLINE1;TSD=null\nX\t79550979\t79561187\tDEL\nX\t79571266\t79571267\tALU;TSD=CTTATTTTGTTTT\nX\t79735785\t79769230\tDEL\nX\t79762384\t79765443\tDEL\nX\t79846845\t79846973\tDEL\nX\t79926527\t79971253\tDUP\nX\t79969280\t79969281\tSVA;TSD=null\nX\t79981486\t79981879\tDEL\nX\t80023586\t80027813\tDEL\nX\t80088241\t80174976\tDEL\nX\t80132397\t80132398\tSVA;TSD=null\nX\t80139055\t80139187\tDEL\nX\t80213833\t80232204\tDUP\nX\t80215707\t80219480\tDEL\nX\t80218748\t80239502\tDUP\nX\t80242587\t80242660\tDEL\nX\t80254248\t80260817\tDEL\nX\t80287951\t80295028\tDEL\nX\t80292897\t80293209\tDEL\nX\t80315861\t80315862\tLINE1;TSD=GAGAAGTGCCTTTC\nX\t80407086\t80411079\tDEL\nX\t80416445\t80417473\tDEL\nX\t80432257\t80443836\tDEL\nX\t80463065\t80464024\tDEL\nX\t80560379\t80574562\tDEL\nX\t80572219\t80572994\tDEL\nX\t80748584\t80780548\tDEL\nX\t80948155\t80948156\tALU;TSD=null\nX\t81042501\t81043081\tDEL\nX\t81053376\t81153674\tDEL\nX\t81166206\t81166207\tLINE1;TSD=null\nX\t81173657\t81175908\tDEL\nX\t81237715\t81279117\tDEL\nX\t81267904\t81267905\tALU;TSD=null\nX\t81292278\t81300668\tDEL\nX\t81307626\t81307627\tALU;TSD=null\nX\t81340526\t81340527\tLINE1;TSD=null\nX\t81395426\t81415858\tDEL\nX\t81415591\t81419136\tDEL\nX\t81438272\t81438273\tALU;TSD=null\nX\t81480654\t81480706\tDEL\nX\t81524829\t81524830\tALU;TSD=AAGTCATTCTT\nX\t81584026\t81587382\tDEL\nX\t81596386\t81625572\tDEL\nX\t81652302\t81652303\tSVA;TSD=null\nX\t81706625\t81706626\tALU;TSD=null\nX\t81831984\t81837662\tDEL\nX\t81901108\t81902898\tDEL\nX\t81944152\t81946346\tDEL\nX\t81982368\t81988139\tDEL\nX\t81985703\t82003431\tDEL\nX\t81997188\t82010483\tDUP\nX\t82038473\t82048134\tDEL\nX\t82199150\t82208177\tDEL\nX\t82276466\t82281774\tDEL\nX\t82484873\t82487113\tDEL\nX\t82696198\t82696199\tLINE1;TSD=null\nX\t82696397\t82696398\tALU;TSD=null\nX\t82765591\t82765694\tDEL\nX\t82829510\t82830147\tDEL\nX\t82907087\t82929732\tDUP\nX\t82911118\t82918079\tDEL\nX\t82959581\t82975142\tDEL\nX\t83018200\t83018201\tLINE1;TSD=null\nX\t83026888\t83027008\tDEL\nX\t83344649\t83347502\tDEL\nX\t83470608\t83488221\tDEL\nX\t83489877\t83507931\tDUP\nX\t83796129\t83807679\tDEL\nX\t83820465\t83826042\tDEL\nX\t83832147\t83832459\tDEL\nX\t83856998\t83864607\tDEL\nX\t83907426\t83908998\tDEL\nX\t84004697\t84011515\tDEL\nX\t84095992\t84097966\tDEL\nX\t84148356\t84150339\tDEL\nX\t84482579\t84482666\tDEL\nX\t84715318\t84715319\tLINE1;TSD=null\nX\t84782056\t84783772\tDEL\nX\t84824449\t84829237\tDEL\nX\t84853876\t84853938\tDEL\nX\t84908626\t84908705\tDEL\nX\t84948672\t84956113\tDEL\nX\t85015786\t85020608\tDEL\nX\t85249719\t85249791\tDEL\nX\t85285296\t85285297\tALU;TSD=null\nX\t85334913\t85335481\tDEL\nX\t85358203\t85358261\tDEL\nX\t85434728\t85434729\tLINE1;TSD=null\nX\t85537769\t85538081\tDEL_ALU\nX\t85725040\t85725113\tDEL\nX\t85750744\t85750745\tLINE1;TSD=null\nX\t85781798\t85781799\tLINE1;TSD=AGAAATGAAAATTAGA\nX\t85788275\t85788408\tDEL\nX\t85878760\t85879080\tDEL_ALU\nX\t85893094\t85895372\tDEL\nX\t85934792\t85934889\tDEL\nX\t85935550\t85935551\tLINE1;TSD=null\nX\t86036345\t86038149\tDEL\nX\t86089540\t86090568\tDEL\nX\t86095313\t86095314\tALU;TSD=null\nX\t86137692\t86137744\tDEL\nX\t86162347\t86162348\tALU;TSD=null\nX\t86234440\t86234654\tDEL\nX\t86286771\t86287222\tDEL\nX\t86428039\t86475920\tDEL\nX\t86500636\t86500637\tLINE1;TSD=TT\nX\t86502244\t86610468\tDEL\nX\t86533991\t86538705\tDEL\nX\t86595640\t86595641\tALU;TSD=AAGAAACTGAC\nX\t86918439\t86918440\tALU;TSD=null\nX\t86927596\t86927597\tALU;TSD=null\nX\t86932640\t88168710\tDEL\nX\t86990326\t87382210\tDEL\nX\t87230496\t87230497\tLINE1;TSD=null\nX\t87574694\t87592766\tDUP\nX\t87610575\t87611920\tDEL\nX\t87658699\t87660937\tDEL\nX\t87665507\t87704064\tDEL\nX\t87742017\t87786924\tDUP\nX\t87796096\t87798129\tDEL\nX\t87976556\t87976557\tALU;TSD=AAATTCTTTTCT\nX\t88028291\t88028292\tALU;TSD=null\nX\t88177670\t88184564\tDEL\nX\t88240799\t88242821\tDEL\nX\t88300568\t88308148\tDEL\nX\t88368129\t88377202\tDEL\nX\t88419336\t88419442\tDEL\nX\t88472162\t88481000\tDEL\nX\t88557153\t88559909\tDEL\nX\t88986665\t88986666\tLINE1;TSD=null\nX\t89005208\t89131673\tDUP\nX\t89033734\t89041116\tDEL\nX\t89320909\t89321056\tDEL\nX\t89337501\t89338729\tDEL\nX\t89448558\t89496553\tDEL\nX\t89578368\t89580380\tDEL\nX\t89893294\t89911689\tDEL\nX\t90188025\t90188026\tALU;TSD=AAAAGAAACAAAAAATAG\nX\t90245430\t90339633\tDUP\nX\t90250870\t90250946\tDEL\nX\t90283367\t90284081\tDEL\nX\t90285432\t90396308\tDUP\nX\t90335646\t90335647\tSVA;TSD=null\nX\t90358348\t90369288\tDEL\nX\t90405133\t90434055\tCNV\nX\t90410866\t90435898\tDEL\nX\t90465927\t90470833\tDEL\nX\t90479371\t90545090\tDEL\nX\t90489412\t90515019\tDEL\nX\t90534152\t90534153\tALU;TSD=AAGAGTGGCAAGACA\nX\t90660188\t90661748\tDEL\nX\t90726826\t90726827\tALU;TSD=null\nX\t90760889\t90760947\tDEL\nX\t90952499\t90957876\tDEL\nX\t90969442\t90979091\tDEL\nX\t91030708\t91030810\tDEL\nX\t91367532\t91368793\tDEL\nX\t91469248\t91485830\tDEL\nX\t91556720\t91556721\tALU;TSD=null\nX\t91678126\t91680088\tDEL\nX\t91692632\t91692633\tLINE1;TSD=GCTTTTGAGTCTT\nX\t91750760\t91751796\tDEL\nX\t91805281\t91805282\tALU;TSD=null\nX\t91989147\t91989148\tALU;TSD=AAAAAAATGCATGATTTT\nX\t92133621\t92133900\tDEL\nX\t92270809\t92280493\tDEL\nX\t92309557\t92359120\tDEL\nX\t92394511\t92395983\tDEL\nX\t92405974\t92407886\tDEL\nX\t92467551\t92467552\tALU;TSD=CTATATATTTTT\nX\t92525640\t92526108\tDEL\nX\t92574087\t92574165\tDEL\nX\t92590148\t92590149\tALU;TSD=AATATACCTACTTATT\nX\t92672301\t92672363\tDEL\nX\t92721911\t92723931\tDEL\nX\t92744087\t92744088\tALU;TSD=CCCAATTTTCTT\nX\t92796294\t92801506\tDEL\nX\t92866378\t92874876\tDEL\nX\t93149072\t93149956\tDEL\nX\t93167765\t93168395\tDEL\nX\t93186810\t93187985\tDEL\nX\t93239768\t93239936\tDEL\nX\t93245047\t93248285\tDEL\nX\t93362085\t93362086\tALU;TSD=AAAATTTAAAAAAAAA\nX\t93378325\t93378391\tDEL\nX\t93380988\t93380989\tALU;TSD=null\nX\t93395877\t93395878\tALU;TSD=null\nX\t93400917\t93404725\tDEL\nX\t93410378\t93418060\tDUP\nX\t93412420\t93417693\tDUP\nX\t93487027\t93488017\tDEL\nX\t93499017\t93500419\tDEL\nX\t93585400\t93585401\tLINE1;TSD=null\nX\t93671787\t93671788\tALU;TSD=null\nX\t93689630\t93689631\tALU;TSD=null\nX\t93729484\t93730105\tDEL\nX\t93742968\t93743270\tDEL\nX\t93878376\t93878377\tALU;TSD=null\nX\t93963860\t93971340\tDEL\nX\t94092792\t94098136\tDUP\nX\t94310595\t94347882\tDUP\nX\t94345404\t94394702\tDUP\nX\t94525650\t94551246\tDEL\nX\t94577305\t94578647\tDEL\nX\t94584364\t94584365\tALU;TSD=null\nX\t94590803\t94595242\tDEL\nX\t94603608\t94632841\tDUP\nX\t94632493\t94632853\tDEL\nX\t94642277\t94651588\tDEL\nX\t94665933\t94665934\tALU;TSD=null\nX\t94698229\t94701973\tDEL\nX\t94718203\t94728013\tDEL\nX\t94788004\t94988129\tDEL\nX\t95014607\t95019687\tDEL\nX\t95031987\t95037619\tDEL\nX\t95039235\t95039236\tALU;TSD=null\nX\t95050841\t95051476\tDEL\nX\t95145344\t95145345\tLINE1;TSD=null\nX\t95180925\t95188834\tCNV\nX\t95180991\t95189063\tDEL\nX\t95187026\t95187027\tALU;TSD=null\nX\t95275776\t95291113\tDEL\nX\t95483886\t95504382\tDUP\nX\t95537355\t95537356\tALU;TSD=TTACTATGCATATTTT\nX\t95631241\t95631242\tALU;TSD=null\nX\t95775838\t95775839\tALU;TSD=AGAAATAAGATGGGA\nX\t96140250\t96143095\tDEL\nX\t96168116\t96168117\tLINE1;TSD=TTCAAATATATTGCTTTC\nX\t96522261\t96522262\tALU;TSD=null\nX\t96556140\t96557208\tDEL\nX\t96606710\t96608737\tDEL\nX\t96619122\t96623156\tDEL\nX\t96672352\t96680820\tDEL\nX\t96707626\t96712886\tDEL\nX\t96763369\t96831761\tDUP\nX\t96784800\t96784801\tALU;TSD=null\nX\t96958277\t96960074\tDEL\nX\t96970300\t96987034\tDEL\nX\t96995240\t96995241\tALU;TSD=CACCTGTTTTA\nX\t97063505\t97064183\tDEL\nX\t97145634\t97151223\tDEL\nX\t97167898\t97168315\tDEL\nX\t97278651\t97281779\tDEL\nX\t97365889\t97366620\tDEL\nX\t97379824\t97379889\tDEL\nX\t97811557\t97812881\tDEL\nX\t97842864\t97842865\tALU;TSD=null\nX\t97938639\t97940652\tDEL\nX\t98013275\t98017816\tDEL\nX\t98111872\t98116683\tDEL\nX\t98225074\t98225075\tALU;TSD=CATAGCTCATTTTTC\nX\t98262844\t98267009\tDEL\nX\t98264302\t98264303\tLINE1;TSD=GGTACTTATTCTT\nX\t98617505\t98620548\tCNV\nX\t98617516\t98620599\tDEL\nX\t98621706\t98621774\tDEL\nX\t98684605\t98814968\tDEL\nX\t98760378\t98760608\tDEL\nX\t98785810\t98787896\tDEL\nX\t98793108\t98793214\tDEL\nX\t98810839\t98812807\tDEL\nX\t99123367\t99123368\tLINE1;TSD=AAAAATTTTAGGACTT\nX\t99242032\t99242033\tALU;TSD=null\nX\t99285552\t99287068\tDEL\nX\t99436064\t99436117\tDEL\nX\t99505153\t99507489\tDEL\nX\t99510840\t99512856\tDEL\nX\t99802682\t99802737\tDEL\nX\t99880024\t99880118\tDEL\nX\t100006797\t100010311\tDEL\nX\t100110945\t100143035\tDEL\nX\t100297960\t100304194\tDEL\nX\t100342156\t100348677\tDEL\nX\t100421325\t100421929\tDEL\nX\t100566274\t100567622\tDEL\nX\t100566804\t100586945\tDEL\nX\t100678121\t100680576\tDEL\nX\t100833020\t100833675\tDEL\nX\t100986014\t100990225\tDEL\nX\t101055330\t101067156\tDUP\nX\t101155257\t101155309\tDEL\nX\t101293973\t101293974\tALU;TSD=AAAAAGCTTATCCACCACG\nX\t101304548\t101307092\tDEL\nX\t101359486\t101359550\tDEL\nX\t101364523\t101364524\tLINE1;TSD=null\nX\t101439260\t101439261\tLINE1;TSD=AAAACAAA\nX\t101832232\t101846317\tCNV\nX\t101833724\t101843776\tDUP\nX\t101958881\t101961314\tDEL\nX\t102256681\t102267528\tDUP\nX\t102272013\t102277302\tDEL\nX\t102277916\t102283742\tDEL\nX\t102333184\t102383738\tDUP\nX\t102363189\t102363190\tLINE1;TSD=AAAAGATAAAACTACA\nX\t102625247\t102625248\tALU;TSD=GTACTAAAATATTTCT\nX\t102692005\t102692006\tALU;TSD=CTTCTCAGCGTTTTTTATT\nX\t102778753\t102786357\tDEL\nX\t102780054\t102780055\tLINE1;TSD=TAAAAGTGACAGTAGTT\nX\t102808947\t102826414\tDEL\nX\t102856671\t102858731\tDEL\nX\t102862592\t102862593\tLINE1;TSD=null\nX\t103166571\t103166572\tALU;TSD=TCCTC\nX\t103171518\t103211637\tDUP\nX\t103261177\t103301346\tDUP\nX\t103402414\t103403027\tDEL\nX\t103468249\t103468316\tDEL\nX\t103558687\t103558990\tDEL\nX\t103608577\t103610573\tDEL\nX\t103851252\t103858785\tDEL\nX\t104043583\t104044601\tDEL\nX\t104070748\t104084901\tDEL\nX\t104186065\t104192446\tCNV\nX\t104261023\t104268501\tDEL\nX\t104362703\t104362704\tLINE1;TSD=null\nX\t104389059\t104394627\tDEL\nX\t104521995\t104522481\tDEL\nX\t104522103\t104522570\tDEL\nX\t104573805\t104587772\tDEL\nX\t104740122\t104740123\tLINE1;TSD=null\nX\t104773532\t104773533\tALU;TSD=null\nX\t104775072\t104775073\tALU;TSD=null\nX\t104784764\t104784970\tDEL\nX\t104898178\t104898179\tALU;TSD=GCTTAAATCTTTT\nX\t105116098\t105118222\tDEL\nX\t105191156\t105191459\tDEL_ALU\nX\t105204383\t105208538\tDEL\nX\t105268272\t105333165\tDUP\nX\t105330783\t105356257\tCNV\nX\t105334340\t105334417\tDEL\nX\t105347808\t105402983\tDUP\nX\t105462699\t105598337\tDUP\nX\t105477495\t105478143\tDEL\nX\t105521386\t105530857\tDEL\nX\t105522241\t105528799\tCNV\nX\t105543271\t105553792\tCNV\nX\t105581887\t105582752\tDEL\nX\t105614764\t105629757\tDUP\nX\t105633238\t105765456\tDUP\nX\t105661482\t105661550\tDEL\nX\t105807018\t105807804\tDEL\nX\t105839090\t105839433\tDEL\nX\t105886631\t105886632\tALU;TSD=AAGAAATTTTTG\nX\t105938262\t105949917\tDEL\nX\t105938835\t105939505\tDEL\nX\t106094120\t106099495\tDEL\nX\t106289379\t106295634\tDEL\nX\t106332801\t106338582\tDEL\nX\t106341533\t106342784\tDEL\nX\t106530047\t106606130\tDUP\nX\t106585621\t106585622\tALU;TSD=null\nX\t106595841\t106595842\tALU;TSD=TCCA\nX\t106628964\t106629030\tDEL\nX\t106661474\t106661475\tALU;TSD=GCCCTGCAACACTGCTTTCT\nX\t106663112\t106680635\tDEL\nX\t106744574\t106744763\tDEL_ALU\nX\t106746040\t106746316\tDEL\nX\t106782128\t106782129\tLINE1;TSD=null\nX\t106813487\t106813488\tALU;TSD=GAAATGTTTACCAG\nX\t106835955\t106835956\tSVA;TSD=TA\nX\t106923102\t106947675\tCNV\nX\t106950594\t106953072\tDEL\nX\t106981593\t106981941\tDEL\nX\t107607940\t107622940\tDEL\nX\t107627881\t107628640\tDEL\nX\t107651526\t107666981\tCNV\nX\t107659539\t107659628\tDEL\nX\t107706519\t107706520\tLINE1;TSD=null\nX\t107740379\t107740911\tDEL\nX\t107846189\t107846190\tLINE1;TSD=null\nX\t108032658\t108032714\tDEL\nX\t108057999\t108059415\tDEL\nX\t108087559\t108087624\tDEL\nX\t108131503\t108152012\tDUP\nX\t108151864\t108156184\tDEL\nX\t108263263\t108274338\tDEL\nX\t108264721\t108265102\tDEL\nX\t108338192\t108338193\tALU;TSD=null\nX\t108347263\t108347264\tALU;TSD=null\nX\t108353221\t108357383\tDEL\nX\t108573616\t108575348\tDEL\nX\t108599123\t108610357\tDEL\nX\t108896709\t108902199\tDEL\nX\t108970568\t108970569\tSVA;TSD=null\nX\t109072643\t109072758\tDEL\nX\t109080843\t109080897\tDEL\nX\t109098154\t109109836\tDEL\nX\t109398184\t109401375\tDEL\nX\t109525724\t109525725\tLINE1;TSD=null\nX\t109591372\t109591373\tALU;TSD=null\nX\t109730872\t109731029\tDEL\nX\t109835147\t109835148\tALU;TSD=null\nX\t109938579\t109942134\tDEL\nX\t109981884\t109984463\tDEL\nX\t110094457\t110095354\tDEL\nX\t110125789\t110125790\tALU;TSD=AAAAGAGTAGAGTTTTTG\nX\t110141273\t110145053\tDEL\nX\t110414618\t110414678\tDEL\nX\t110465342\t110465394\tDEL\nX\t110595844\t110595941\tDEL\nX\t110807787\t110808204\tDEL\nX\t111133753\t111133816\tDEL\nX\t111133909\t111148477\tDUP\nX\t111153256\t111153863\tDEL\nX\t111187088\t111189328\tDEL\nX\t111229571\t111229572\tLINE1;TSD=ATCCCAAATTCTT\nX\t111276718\t111276719\tALU;TSD=TGTCTTTTT\nX\t111316672\t111316673\tSVA;TSD=null\nX\t111420997\t111420998\tALU;TSD=null\nX\t111439435\t111578797\tDEL\nX\t111530247\t111531377\tDEL\nX\t111557758\t111557759\tLINE1;TSD=AGGACTTTT\nX\t111619957\t111621780\tDEL\nX\t111667087\t111936181\tDUP\nX\t111711651\t111745323\tCNV\nX\t111818173\t111840496\tDUP\nX\t111912510\t111912674\tDEL\nX\t111994369\t111997226\tDEL\nX\t112008322\t112008380\tDEL\nX\t112032217\t112032218\tLINE1;TSD=GGGTAGTTTCTTTAT\nX\t112052858\t112053032\tDEL\nX\t112149816\t112152434\tDEL\nX\t112161029\t112168547\tCNV\nX\t112169917\t112169918\tALU;TSD=null\nX\t112351072\t112351073\tLINE1;TSD=null\nX\t112435261\t112435262\tALU;TSD=null\nX\t112435952\t112440586\tDEL\nX\t112436185\t112440675\tCNV\nX\t112443765\t112444514\tDEL\nX\t112522502\t112529227\tDEL\nX\t112597965\t112598247\tDEL\nX\t112788553\t112788681\tDEL\nX\t112877015\t112877346\tDEL_ALU\nX\t112892922\t113007167\tDEL\nX\t113148602\t113148706\tDEL\nX\t113149721\t113163457\tDEL\nX\t113227860\t113232251\tDEL\nX\t113231092\t113231093\tALU;TSD=null\nX\t113253298\t113253376\tDEL\nX\t113296407\t113296905\tDEL\nX\t113318427\t113417625\tCNV\nX\t113319208\t113323151\tDEL\nX\t113348190\t113355238\tCNV\nX\t113348331\t113355364\tDEL\nX\t113412632\t113416467\tDEL\nX\t113740508\t113740509\tALU;TSD=AAAAAGTAGATATCTG\nX\t113775634\t113776063\tDEL\nX\t113879043\t113879044\tLINE1;TSD=null\nX\t113997499\t113997563\tDEL\nX\t114005906\t114005907\tALU;TSD=null\nX\t114032058\t114032059\tALU;TSD=CTGTGTCTTGAATTT\nX\t114052726\t114056652\tDEL\nX\t114056288\t114056289\tALU;TSD=null\nX\t114059856\t114424105\tDUP\nX\t114214889\t114214890\tALU;TSD=null\nX\t114249813\t114249814\tALU;TSD=null\nX\t114286632\t114288986\tDEL\nX\t114505815\t114505875\tDEL\nX\t114542484\t114544509\tDEL\nX\t114565895\t114566055\tDEL\nX\t114670492\t114670787\tDEL_ALU\nX\t114709122\t114709123\tALU;TSD=null\nX\t114716645\t114727976\tDUP\nX\t114777311\t114777312\tLINE1;TSD=AAGAAAAACCTGTT\nX\t114828525\t114829308\tDEL\nX\t114871817\t114871818\tALU;TSD=null\nX\t114914154\t114918367\tDEL\nX\t114923940\t114926524\tDEL\nX\t115137999\t115152939\tDEL\nX\t115182224\t115183321\tDEL\nX\t115208182\t115208291\tDEL\nX\t115216698\t115216887\tDEL\nX\t115374652\t115382115\tDEL\nX\t115491990\t115492298\tDEL\nX\t115498834\t115498888\tDEL\nX\t115505238\t115506128\tDEL\nX\t115538506\t115543278\tDEL\nX\t115544162\t115545105\tDEL\nX\t115754331\t115754332\tALU;TSD=null\nX\t115787921\t115847146\tDEL\nX\t115935706\t116029510\tDUP\nX\t115986169\t115999068\tDEL\nX\t116022095\t116023545\tDEL\nX\t116025285\t116025286\tLINE1;TSD=AA\nX\t116059928\t116060015\tDEL\nX\t116072766\t116098248\tCNV\nX\t116109172\t116302603\tDEL\nX\t116121000\t116133556\tDEL\nX\t116126382\t116126467\tDEL\nX\t116380300\t116380301\tALU;TSD=null\nX\t116438555\t116438556\tALU;TSD=AAGAGTGAATGCTG\nX\t116454345\t116454664\tDEL_ALU\nX\t116503005\t116503235\tDEL\nX\t116514316\t116590069\tDEL\nX\t116577188\t116577462\tDEL\nX\t116610705\t116610765\tDEL\nX\t116611894\t116611944\tDEL\nX\t116627646\t116627647\tALU;TSD=AAGTAAAGTACTTATT\nX\t116720749\t116722788\tDEL\nX\t116754602\t116757327\tDEL\nX\t116808653\t116808760\tDEL\nX\t116838864\t116838865\tALU;TSD=TAATAATAAATCAA\nX\t116842016\t116842861\tDEL\nX\t116914925\t116915073\tDEL\nX\t116918377\t116928487\tDEL\nX\t116930920\t116930921\tLINE1;TSD=null\nX\t116979882\t116980149\tDEL\nX\t117090030\t117090031\tALU;TSD=null\nX\t117112561\t117120259\tDEL\nX\t117376106\t117378799\tDEL\nX\t117454126\t117454959\tDEL\nX\t117681322\t117681409\tDEL\nX\t117758976\t117758977\tLINE1;TSD=null\nX\t117976514\t117979494\tDEL\nX\t118203397\t118203398\tALU;TSD=AAAATACAGACTT\nX\t118329554\t118337961\tDEL\nX\t118411168\t118469125\tDEL\nX\t118417565\t118549627\tDEL\nX\t118447777\t118448592\tDEL\nX\t118467590\t118506357\tCNV\nX\t118486258\t118501298\tDEL\nX\t118496267\t118496394\tDEL\nX\t118523301\t118523365\tDEL\nX\t118873967\t118876560\tDEL\nX\t118908738\t118911083\tDEL\nX\t118949933\t118951131\tDEL\nX\t119029253\t119058207\tCNV\nX\t119033750\t119067483\tCNV\nX\t119036694\t119055824\tCNV\nX\t119083053\t119100549\tDEL\nX\t119267168\t119267169\tSVA;TSD=null\nX\t119486851\t119531340\tDEL\nX\t119527856\t119527857\tALU;TSD=TCTGTTGTGGTTTT\nX\t119684366\t119684367\tLINE1;TSD=AAAAGCCTTCCTGG\nX\t119839399\t119843259\tDEL\nX\t119892844\t119892845\tLINE1;TSD=CATGTCTTTCTTTT\nX\t119951623\t119955626\tDEL\nX\t120160584\t120168106\tDEL\nX\t120404314\t120404315\tALU;TSD=null\nX\t120532520\t120533981\tDEL\nX\t120549880\t120677946\tDEL\nX\t120588422\t120589335\tDEL\nX\t120612508\t120617824\tCNV\nX\t120774102\t120776600\tDEL\nX\t120798244\t120814269\tDEL\nX\t120801576\t120932895\tDEL\nX\t120889998\t120952700\tDEL\nX\t120912381\t120912382\tALU;TSD=null\nX\t120974952\t120978752\tDEL\nX\t121009409\t121009467\tDEL\nX\t121054411\t121066916\tCNV\nX\t121268952\t121378787\tDEL\nX\t121308064\t121315515\tDEL\nX\t121386279\t121386519\tDEL\nX\t121569332\t121569333\tALU;TSD=GTCATCTACAATTTCTTTCTT\nX\t121581286\t121581287\tALU;TSD=null\nX\t121760094\t121760095\tLINE1;TSD=null\nX\t121780153\t121787535\tDEL\nX\t121912788\t121912868\tDEL\nX\t121946120\t121949175\tCNV\nX\t121977572\t121977677\tDEL\nX\t122114608\t122143121\tDUP\nX\t122131124\t122137898\tCNV\nX\t122156938\t122157080\tDEL\nX\t122185498\t122185850\tDEL_ALU\nX\t122219030\t122223855\tDEL\nX\t122226272\t122226273\tLINE1;TSD=null\nX\t122235285\t122236168\tDEL\nX\t122315501\t122316263\tDEL\nX\t122316013\t122316578\tDEL\nX\t122359455\t122359456\tLINE1;TSD=null\nX\t122372569\t122373422\tDEL\nX\t122672378\t122672379\tALU;TSD=GATCTCCATTTCTTT\nX\t122677452\t122677453\tALU;TSD=null\nX\t122731648\t122734078\tDEL\nX\t122763589\t122763676\tDEL\nX\t122853439\t122860363\tDEL\nX\t122881186\t122881187\tALU;TSD=null\nX\t122922879\t122922880\tSVA;TSD=AGAAAGTAAGATAACAG\nX\t122951245\t122952841\tDEL\nX\t122972835\t122973660\tDEL\nX\t122977609\t122985456\tDEL\nX\t122987653\t122992301\tDEL\nX\t122999138\t123002941\tDEL\nX\t123059168\t123067187\tDEL\nX\t123154776\t123155087\tDEL\nX\t123606205\t123606206\tALU;TSD=AAAAAAAAAAAAAAAAAAAAAA\nX\t123611800\t123611801\tLINE1;TSD=null\nX\t123787686\t123789168\tDEL\nX\t123799417\t123799498\tDEL\nX\t123848395\t123848396\tLINE1;TSD=null\nX\t123921260\t123921261\tLINE1;TSD=CTATACACAGAATTT\nX\t123988402\t123988480\tDEL\nX\t123992125\t123993412\tDEL\nX\t124090199\t124097209\tDEL\nX\t124115707\t124116136\tDEL\nX\t124175500\t124177908\tDEL\nX\t124234123\t124236345\tDEL\nX\t124384088\t124384089\tLINE1;TSD=null\nX\t124516877\t124516878\tALU;TSD=null\nX\t124522563\t124528065\tDEL\nX\t124553816\t124554440\tDEL\nX\t124591705\t124593386\tDEL\nX\t124678004\t124689491\tDEL\nX\t124904994\t124988751\tDEL\nX\t124991759\t124995155\tDEL\nX\t124992814\t124993318\tDEL\nX\t125077710\t125077946\tDEL_LINE1\nX\t125092337\t125131442\tCNV\nX\t125092796\t125130906\tDEL\nX\t125101247\t125290547\tDEL\nX\t125103522\t125119972\tCNV\nX\t125269140\t125271067\tDEL\nX\t125372640\t125372765\tDEL\nX\t125392060\t125392136\tDEL\nX\t125487116\t125487117\tLINE1;TSD=ATCCAAAGCTT\nX\t125560556\t125560557\tALU;TSD=null\nX\t125778805\t125778806\tALU;TSD=null\nX\t125850344\t125852884\tDEL\nX\t125857686\t125857687\tLINE1;TSD=null\nX\t125891662\t125926810\tDEL\nX\t125939424\t125944079\tDEL\nX\t125941756\t125943170\tDEL\nX\t125960623\t125960624\tALU;TSD=AAAAAACATATTAGTA\nX\t125987965\t125990921\tDEL\nX\t125998504\t126118892\tDEL\nX\t126122627\t126123671\tDEL\nX\t126290693\t126290694\tALU;TSD=TTATTTTTACAATTCTT\nX\t126330194\t126331264\tDEL\nX\t126581696\t126581697\tLINE1;TSD=null\nX\t126583432\t126583433\tALU;TSD=AAAATATACTA\nX\t126597734\t126602382\tDEL\nX\t126759390\t126886628\tDEL\nX\t126779103\t126779104\tALU;TSD=null\nX\t126852159\t126947127\tDEL\nX\t126852500\t126852551\tDEL\nX\t126901433\t126909608\tDEL\nX\t126945026\t127075666\tDEL\nX\t127026713\t127026788\tDEL\nX\t127115869\t127152716\tDEL\nX\t127142095\t127241872\tDEL\nX\t127356141\t127356142\tALU;TSD=AAAAATTAAGGTAACTCTGC\nX\t127369849\t127511416\tDEL\nX\t127391777\t127427976\tDEL\nX\t127412105\t127412106\tLINE1;TSD=null\nX\t127415839\t127432267\tDEL\nX\t127452736\t127456285\tDEL\nX\t127498484\t127498582\tDEL\nX\t127612684\t127612685\tALU;TSD=null\nX\t127705419\t127706892\tDEL\nX\t127716133\t127757765\tDEL\nX\t127763536\t127763537\tALU;TSD=null\nX\t127815549\t127816839\tDEL\nX\t127943444\t127943542\tDEL\nX\t128041065\t128041132\tDEL\nX\t128046284\t128046401\tDEL\nX\t128046771\t128070740\tDUP\nX\t128216094\t128216148\tDEL\nX\t128269800\t128269801\tALU;TSD=null\nX\t128320396\t128327515\tDEL\nX\t128348971\t128349037\tDEL\nX\t128375466\t128378855\tDEL\nX\t128379356\t128382898\tDEL\nX\t128499485\t128499539\tDEL\nX\t128500439\t128502436\tDEL\nX\t128661031\t128665656\tDEL\nX\t128794882\t128795189\tDEL\nX\t128927263\t128927264\tALU;TSD=AGAATTTC\nX\t129025580\t129027905\tDEL\nX\t129072766\t129075856\tDEL\nX\t129079658\t129085507\tDEL\nX\t129094010\t129096747\tDEL\nX\t129503580\t129503581\tLINE1;TSD=null\nX\t129511350\t129524045\tDEL\nX\t129511568\t129523970\tCNV\nX\t129511736\t129531248\tDUP\nX\t129525281\t129525282\tLINE1;TSD=CACATATCTCTT\nX\t129570944\t129597534\tDUP\nX\t129600508\t129600509\tLINE1;TSD=null\nX\t129600830\t129606538\tDEL\nX\t129636757\t129644089\tDEL\nX\t129667605\t129668877\tDEL\nX\t129860417\t129870832\tDEL\nX\t130005063\t130017222\tDEL\nX\t130136840\t130136841\tLINE1;TSD=null\nX\t130153667\t130157946\tDEL\nX\t130224846\t130224847\tALU;TSD=null\nX\t130230734\t130230735\tSVA;TSD=GGTGCTAGTCCTTCTTT\nX\t130271072\t130271136\tDEL\nX\t130274755\t130274825\tDEL\nX\t130294764\t130303951\tDEL\nX\t130377774\t130378680\tDEL\nX\t130419609\t130499134\tDUP\nX\t130489210\t130572918\tCNV\nX\t130529213\t130530823\tDEL\nX\t130540495\t130540496\tLINE1;TSD=null\nX\t130546244\t130547839\tDEL\nX\t130760146\t130811378\tDUP\nX\t130778548\t130793457\tDEL\nX\t130789467\t130847286\tDUP\nX\t130838070\t130839578\tDEL\nX\t130838636\t130868183\tDUP\nX\t130921955\t130921956\tALU;TSD=GTCACATTTTCTT\nX\t131005357\t131008631\tDEL\nX\t131089382\t131089611\tDEL\nX\t131138014\t131138099\tDEL\nX\t131303138\t131444024\tDUP\nX\t131473061\t131473278\tDEL\nX\t131509268\t131509620\tDEL\nX\t131694553\t131695226\tDEL\nX\t131695169\t131695170\tLINE1;TSD=null\nX\t131715059\t131715696\tDEL\nX\t131744890\t131745334\tDEL\nX\t131905529\t131911902\tDUP\nX\t131913728\t131914343\tDEL\nX\t131920802\t131927249\tDEL\nX\t131939439\t131941566\tDEL\nX\t131951321\t131958840\tDEL\nX\t132221059\t132221060\tLINE1;TSD=null\nX\t132537103\t132537908\tDEL\nX\t132658201\t132663275\tDEL\nX\t132769210\t132769480\tDEL\nX\t133004651\t133004652\tALU;TSD=TAAAATGAGGATCTT\nX\t133086929\t133086930\tLINE1;TSD=null\nX\t133295126\t133298458\tDEL\nX\t133347721\t133352266\tDEL\nX\t133347752\t133352160\tCNV\nX\t133367997\t133368233\tDEL\nX\t133394234\t133397211\tDEL\nX\t133520874\t133523028\tDEL\nX\t133669226\t133669299\tDEL\nX\t133864428\t133865788\tDEL\nX\t134006110\t134006111\tALU;TSD=null\nX\t134161502\t134162053\tDEL_LINE1\nX\t134234489\t134323535\tDUP\nX\t134296467\t134343085\tDUP\nX\t134309593\t134310565\tDEL\nX\t134329722\t134507064\tDUP\nX\t134390717\t134438346\tCNV\nX\t134450378\t134453504\tDEL\nX\t134512154\t134566069\tDUP\nX\t134519685\t134522284\tDEL\nX\t134532108\t134535566\tDEL\nX\t134641990\t134648586\tDEL\nX\t134652695\t134790974\tDUP\nX\t134748495\t134791065\tDUP\nX\t134756231\t134773985\tDEL\nX\t134776925\t134776926\tALU;TSD=null\nX\t134810690\t134828847\tDUP\nX\t134813415\t134813470\tDEL\nX\t134815179\t134851699\tDUP\nX\t134891974\t134910593\tDUP\nX\t134903435\t134948570\tDUP\nX\t134905005\t134916506\tDUP\nX\t134983163\t134993487\tDEL\nX\t134994786\t135022311\tDUP\nX\t135052293\t135052832\tDEL\nX\t135105322\t135105372\tDEL\nX\t135115762\t135115821\tDEL\nX\t135152197\t135152198\tALU;TSD=CAGTGCAGCACATATCT\nX\t135157982\t135158313\tDEL_ALU\nX\t135217358\t135220852\tDEL\nX\t135299187\t135302198\tDEL\nX\t135326848\t135326972\tDEL\nX\t135555215\t135555305\tDEL\nX\t135563175\t135563311\tDEL\nX\t135769569\t135769570\tLINE1;TSD=AAGAAGATACATTAAC\nX\t135939455\t135943733\tDEL\nX\t135994495\t136001854\tDEL\nX\t136013968\t136013969\tALU;TSD=null\nX\t136025714\t136025715\tALU;TSD=GGAAATGTCAGCTCTTTTC\nX\t136185681\t136194340\tDEL\nX\t136185841\t136190378\tDEL\nX\t136344615\t136349822\tDEL\nX\t136349840\t136349841\tALU;TSD=AAAAGCTCTGGTTGGTGGA\nX\t136719323\t136722865\tDEL\nX\t136957297\t136957298\tALU;TSD=GATGAAGTGTGATTT\nX\t137172446\t137172505\tDEL\nX\t137234502\t137234592\tDEL\nX\t137241822\t137248008\tDEL\nX\t137271183\t137271406\tDEL\nX\t137350678\t137377835\tDUP\nX\t137711562\t137711945\tDEL\nX\t138122571\t138130736\tDEL\nX\t138146418\t138146696\tDEL_ALU\nX\t138154195\t138205844\tDEL\nX\t138157986\t138158176\tDEL_ALU\nX\t138261197\t138276559\tDEL\nX\t138350817\t138350939\tDEL\nX\t138384894\t138385220\tDEL_ALU\nX\t138420669\t138435943\tDEL\nX\t138438676\t138438755\tDEL\nX\t138479906\t138479907\tALU;TSD=null\nX\t138500881\t138524083\tDUP\nX\t138508519\t138509925\tDEL\nX\t138744482\t138744483\tALU;TSD=CCCCTATAAAGATTTT\nX\t138792013\t138951270\tDUP\nX\t138934761\t139013426\tDUP\nX\t138941963\t138942285\tDEL_ALU\nX\t139023159\t139062252\tDUP\nX\t139045796\t139045929\tDEL\nX\t139091026\t139093375\tDEL\nX\t139113319\t139125266\tDUP\nX\t139134371\t139142432\tDEL\nX\t139142107\t139144002\tDEL\nX\t139494778\t139503081\tDEL\nX\t139494849\t139512613\tDEL\nX\t139502739\t139503830\tDEL\nX\t139502775\t139515871\tDEL\nX\t139502853\t139503094\tDEL\nX\t139760537\t139771719\tDEL\nX\t139853445\t139853446\tALU;TSD=AAAAGACAAAAGCA\nX\t140028196\t140034012\tDEL\nX\t140029452\t140029502\tDEL\nX\t140039288\t140078780\tCNV\nX\t140292652\t140335017\tCNV\nX\t140322707\t140657766\tDEL\nX\t140334291\t140560547\tCNV\nX\t140375697\t140375809\tDEL\nX\t140396601\t140396602\tALU;TSD=null\nX\t140476728\t140479230\tDEL\nX\t140667978\t140774647\tCNV\nX\t140671851\t140785735\tDEL\nX\t140789921\t140855079\tCNV\nX\t140792712\t140835294\tDEL\nX\t140792830\t140834797\tCNV\nX\t140887255\t140887344\tDEL\nX\t140957172\t140958534\tDEL\nX\t140957745\t140959430\tDEL\nX\t141084211\t141086866\tDEL\nX\t141165498\t141165964\tDEL\nX\t141197840\t141197841\tLINE1;TSD=TTATTGCTGCTTGCTTATTTCT\nX\t141204319\t141204320\tLINE1;TSD=TTGGTCTTAGTTCT\nX\t141232859\t141232977\tDEL\nX\t141385372\t141385373\tALU;TSD=null\nX\t141469740\t141469741\tLINE1;TSD=null\nX\t141583593\t141583594\tALU;TSD=AT\nX\t141843049\t141860020\tDEL\nX\t141854565\t141860145\tDEL\nX\t141893474\t141895729\tDEL\nX\t141924785\t141924915\tDEL\nX\t141980345\t141993319\tDEL\nX\t142004125\t142004175\tDEL\nX\t142051221\t142051283\tDEL\nX\t142197943\t142198062\tDEL\nX\t142297932\t142302367\tDEL\nX\t142342209\t142343067\tDEL\nX\t142369685\t142515399\tCNV\nX\t142499147\t142499148\tALU;TSD=null\nX\t142600307\t142798883\tDEL\nX\t142833364\t142833487\tDEL\nX\t142885690\t142885691\tALU;TSD=ATAAATATAAAAGTGTTATTAC\nX\t142926126\t142926127\tALU;TSD=TGCTCTTTTTTGTT\nX\t142958569\t142958570\tALU;TSD=null\nX\t143063721\t143063896\tDEL\nX\t143329808\t143329809\tALU;TSD=null\nX\t143420722\t143420723\tALU;TSD=AAAACAATGAGGTC\nX\t143628378\t143637701\tDEL\nX\t143657026\t143659596\tDEL\nX\t143704684\t143704685\tLINE1;TSD=GAAAATCCTGCTTGCC\nX\t143717905\t143724245\tDEL\nX\t143723351\t143723352\tALU;TSD=null\nX\t143778329\t143778386\tDEL\nX\t143843274\t143843581\tDEL_ALU\nX\t144060275\t144060276\tALU;TSD=null\nX\t144130240\t144130241\tALU;TSD=null\nX\t144180262\t144190713\tDEL\nX\t144217923\t144309451\tDEL\nX\t144299026\t144353484\tDEL\nX\t144322610\t144323238\tDEL\nX\t144326342\t144482243\tDEL\nX\t144365176\t144397521\tCNV\nX\t144422074\t144424508\tDEL\nX\t144443230\t144443231\tALU;TSD=TCAATGACTTTT\nX\t144454642\t144454828\tDEL\nX\t144887118\t144887538\tDEL\nX\t145052104\t145055137\tDEL\nX\t145090496\t145091939\tDEL\nX\t145116600\t145116684\tDEL\nX\t145124596\t145135079\tDEL\nX\t145221989\t145237539\tDEL\nX\t145237921\t145237922\tLINE1;TSD=null\nX\t145399382\t145401050\tDEL\nX\t145404316\t145422276\tDEL\nX\t145509550\t145510407\tDEL\nX\t145526507\t145526819\tDEL_ALU\nX\t145539119\t145539120\tALU;TSD=AAAACTTCACCTATC\nX\t145727200\t145727288\tDEL\nX\t145758649\t145758650\tALU;TSD=null\nX\t145882153\t145967775\tDUP\nX\t146038209\t146041733\tDEL\nX\t146119815\t146131909\tCNV\nX\t146169503\t146169738\tDEL\nX\t146179855\t146185929\tDEL\nX\t146253811\t146254811\tDEL\nX\t146340753\t146346040\tDEL\nX\t146374337\t146381726\tDEL\nX\t146374388\t146378041\tDEL\nX\t146425255\t146426939\tDEL\nX\t146430505\t146430562\tDEL\nX\t146459618\t146459619\tLINE1;TSD=null\nX\t146559239\t146559345\tDEL_LINE1\nX\t146570325\t146572510\tDEL\nX\t146683080\t146683534\tDEL\nX\t146756968\t146757031\tDEL\nX\t146782399\t146783836\tDEL\nX\t146843691\t146849792\tDEL\nX\t146849495\t146849811\tDEL\nX\t146849941\t146850021\tDEL\nX\t146851055\t146851056\tALU;TSD=AATGGTATTGTTTTT\nX\t146983498\t146985520\tDEL\nX\t147037833\t147037834\tALU;TSD=null\nX\t147192263\t147203418\tDEL\nX\t147194081\t147194082\tALU;TSD=AAATATTAACTTGTA\nX\t147434332\t147434405\tDEL\nX\t147494550\t147494551\tALU;TSD=null\nX\t147509695\t147511237\tDEL\nX\t147948687\t147955501\tDEL\nX\t148287176\t148374732\tDUP\nX\t148303489\t148303585\tDEL\nX\t148539115\t148539116\tALU;TSD=AGAACTCTC\nX\t148579845\t148630997\tDUP\nX\t148640196\t148654619\tCNV\nX\t148685833\t148739727\tCNV\nX\t148762813\t148775448\tDUP\nX\t148771685\t148811274\tDUP\nX\t148803850\t148831837\tDEL\nX\t148831648\t148836056\tDEL\nX\t148848506\t148902086\tCNV\nX\t148957595\t148998958\tCNV\nX\t149006503\t149006571\tDEL\nX\t149084379\t149084667\tDEL\nX\t149236087\t149239411\tDEL\nX\t149240944\t149265118\tDUP\nX\t149379029\t149379030\tLINE1;TSD=null\nX\t149451325\t149451326\tALU;TSD=AACAAGATAGCGAGAGGTTG\nX\t149494721\t149494722\tALU;TSD=null\nX\t149549314\t149549368\tDEL\nX\t149551136\t149551472\tDEL_ALU\nX\t149927786\t149928796\tDEL\nX\t150268163\t150270796\tDEL\nX\t150293934\t150295714\tDEL\nX\t150317479\t150317600\tDEL\nX\t150386183\t150386184\tALU;TSD=null\nX\t150420005\t150420375\tDEL\nX\t150537389\t150537390\tALU;TSD=null\nX\t150585730\t150586802\tDEL\nX\t150707071\t150712355\tDEL\nX\t150711379\t150712579\tDEL\nX\t150826291\t150834971\tDUP\nX\t150876871\t150878517\tDEL\nX\t150934100\t150939459\tDEL\nX\t150997048\t150997275\tDEL\nX\t151218769\t151218770\tALU;TSD=null\nX\t151261523\t151261524\tALU;TSD=null\nX\t151345023\t151345024\tLINE1;TSD=null\nX\t151473664\t151477031\tDEL\nX\t151565366\t151566720\tDEL\nX\t151759240\t151763151\tDEL\nX\t151831777\t151831778\tALU;TSD=GATTTTGTTCTTTCTT\nX\t151982308\t151982367\tDEL\nX\t151982765\t151982839\tDEL\nX\t152001805\t152001806\tALU;TSD=AAAAGTTATATGTGG\nX\t152048325\t152223267\tDUP\nX\t152093580\t152101608\tDEL\nX\t152103859\t152107426\tCNV\nX\t152104023\t152107459\tDEL\nX\t152105370\t152107509\tDEL\nX\t152107192\t152107456\tDEL\nX\t152342861\t152367832\tDUP\nX\t152350177\t152372400\tDUP\nX\t152350641\t152351384\tDEL\nX\t152360625\t152367335\tDEL\nX\t152413932\t152529446\tDUP\nX\t152414940\t152476204\tDUP\nX\t152746729\t152746781\tDEL\nX\t152803047\t152804209\tDEL\nX\t152807507\t152807578\tDEL\nX\t152863846\t152867635\tDEL\nX\t152883216\t152883217\tALU;TSD=AAGAAACTATTGCCTG\nX\t152895321\t152896285\tDEL\nX\t152943315\t152943369\tDEL\nX\t153030469\t153035081\tDEL\nX\t153255724\t153262895\tDEL\nX\t153413538\t153414996\tDEL\nX\t153622445\t153624732\tDEL\nX\t153629278\t153629591\tDEL\nX\t153630779\t153630975\tDEL\nX\t153635023\t153636375\tDEL\nX\t153728656\t153733851\tDEL\nX\t153733651\t153733836\tDEL\nX\t153733755\t153733868\tDEL\nX\t153733767\t153734279\tDEL\nX\t153733776\t153733831\tDEL\nX\t153819664\t153830620\tCNV\nX\t153820981\t153914845\tDUP\nX\t153917072\t153917073\tSVA;TSD=null\nX\t154008834\t154009031\tDEL\nX\t154014130\t154014233\tDEL\nX\t154017323\t154017395\tDEL\nX\t154110804\t154607929\tDEL\nX\t154119649\t154276173\tDUP\nX\t154265736\t154273101\tDEL\nX\t154265886\t154272944\tCNV\nX\t154275425\t154275426\tALU;TSD=null\nX\t154285159\t154285433\tDEL\nX\t154285270\t154285819\tDEL\nX\t154285287\t154285339\tDEL\nX\t154285781\t154285841\tDEL\nX\t154298802\t154384198\tDUP\nX\t154313357\t154314049\tDEL\nX\t154314369\t154314535\tDEL\nX\t154385298\t154404162\tDEL\nX\t154386087\t154420956\tCNV\nX\t154402183\t154449882\tDUP\nX\t154403901\t154403987\tDEL\nX\t154403956\t154404042\tDEL\nX\t154485925\t154486943\tDEL\nX\t154511616\t154511617\tALU;TSD=null\nX\t154553899\t154556947\tDEL\nX\t154632079\t154645930\tDEL\nX\t154658693\t154683572\tDUP\nX\t154726219\t154770591\tDUP\nX\t154762277\t154778295\tCNV\nX\t154762298\t154778228\tDEL\nX\t154766103\t154778119\tCNV\nX\t154771110\t154778240\tDEL\nX\t154771291\t154781130\tDEL\nX\t154776815\t154786039\tDEL\nX\t154778111\t154782566\tDEL\nX\t154778177\t154778659\tDEL\nX\t154781652\t154787659\tDEL\nX\t154790161\t154790501\tDEL\nX\t154790197\t154802370\tDEL\nX\t154790201\t154790202\tLINE1;TSD=null\nX\t154798201\t154803718\tDEL\nX\t154867954\t154868024\tDEL\nX\t154876376\t154880988\tDEL\nX\t154882092\t154893477\tDEL\nX\t154909099\t154918556\tDEL\nX\t154909888\t154909889\tALU;TSD=null\nX\t154916967\t154933972\tDEL\nX\t154918469\t154921719\tDEL\nX\t154957224\t154965634\tDEL\nX\t155040763\t155047741\tDEL\nX\t155090084\t155092227\tDEL\nX\t155146395\t155148983\tDEL\n"
  },
  {
    "path": "tests/AnnotSV/test_02_HG00096/input/HG00096.wgs.mergedSV.v8.20130502.svs.genotypes.vcf",
    "content": "##fileformat=VCFv4.1\n##FILTER=<ID=PASS,Description=\"All filters passed\">\n##INFO=<ID=TSD,Number=1,Type=String,Description=\"Precise Target Site Duplication for bases, if unknown, value will be NULL\">\n##INFO=<ID=SVTYPE,Number=1,Type=String,Description=\"Type of structural variant\">\n##INFO=<ID=MSTART,Number=1,Type=Integer,Description=\"Mitochondrial start coordinate of inserted sequence\">\n##INFO=<ID=MLEN,Number=1,Type=Integer,Description=\"Estimated length of mitochondrial insert\">\n##INFO=<ID=MEND,Number=1,Type=Integer,Description=\"Mitochondrial end coordinate of inserted sequence\">\n##INFO=<ID=MEINFO,Number=4,Type=String,Description=\"Mobile element info of the form NAME,START,END<POLARITY; If there is only 5' OR 3' support for this call, will be NULL NULL for START and END\">\n##INFO=<ID=SVLEN,Number=.,Type=Integer,Description=\"Difference in length between REF and ALT alleles\">\n##INFO=<ID=IMPRECISE,Number=0,Type=Flag,Description=\"Imprecise structural variation\">\n##INFO=<ID=CIEND,Number=2,Type=Integer,Description=\"Confidence interval around END for imprecise variants\">\n##INFO=<ID=CIPOS,Number=2,Type=Integer,Description=\"Confidence interval around POS for imprecise variants\">\n##INFO=<ID=END,Number=1,Type=Integer,Description=\"End coordinate of this variant\">\n##INFO=<ID=CS,Number=1,Type=String,Description=\"Source call set.\">\n##INFO=<ID=MC,Number=.,Type=String,Description=\"Merged calls.\">\n##INFO=<ID=AF,Number=A,Type=Float,Description=\"Estimated allele frequency in the range (0,1)\">\n##INFO=<ID=NS,Number=1,Type=Integer,Description=\"Number of samples with data\">\n##INFO=<ID=EAS_AF,Number=A,Type=Float,Description=\"Allele frequency in the EAS populations calculated from AC and AN, in the range (0,1)\">\n##INFO=<ID=EUR_AF,Number=A,Type=Float,Description=\"Allele frequency in the EUR populations calculated from AC and AN, in the range (0,1)\">\n##INFO=<ID=AFR_AF,Number=A,Type=Float,Description=\"Allele frequency in the AFR populations calculated from AC and AN, in the range (0,1)\">\n##INFO=<ID=AMR_AF,Number=A,Type=Float,Description=\"Allele frequency in the AMR populations calculated from AC and AN, in the range (0,1)\">\n##INFO=<ID=SAS_AF,Number=A,Type=Float,Description=\"Allele frequency in the SAS populations calculated from AC and AN, in the range (0,1)\">\n##INFO=<ID=SITEPOST,Number=1,Type=Float,Description=\"Site Median posterior probability from MVNcall.\">\n##FORMAT=<ID=GT,Number=1,Type=String,Description=\"Genotype\">\n##contig=<ID=1,length=249250621>\n##contig=<ID=2,length=243199373>\n##contig=<ID=3,length=198022430>\n##contig=<ID=4,length=191154276>\n##contig=<ID=5,length=180915260>\n##contig=<ID=6,length=171115067>\n##contig=<ID=7,length=159138663>\n##contig=<ID=8,length=146364022>\n##contig=<ID=9,length=141213431>\n##contig=<ID=10,length=135534747>\n##contig=<ID=11,length=135006516>\n##contig=<ID=12,length=133851895>\n##contig=<ID=13,length=115169878>\n##contig=<ID=14,length=107349540>\n##contig=<ID=15,length=102531392>\n##contig=<ID=16,length=90354753>\n##contig=<ID=17,length=81195210>\n##contig=<ID=18,length=78077248>\n##contig=<ID=19,length=59128983>\n##contig=<ID=20,length=63025520>\n##contig=<ID=21,length=48129895>\n##contig=<ID=22,length=51304566>\n##contig=<ID=X,length=155270560>\n##contig=<ID=Y,length=59373566>\n##contig=<ID=MT,length=16569>\n##INFO=<ID=AC,Number=.,Type=Integer,Description=\"Allele count in genotypes\">\n##INFO=<ID=AN,Number=1,Type=Integer,Description=\"Total number of alleles in called genotypes\">\n#CHROM\tPOS\tID\tREF\tALT\tQUAL\tFILTER\tINFO\tFORMAT\tHG00096\n1\t3995268\tALU_umary_ALU_5\tN\t<INS:ME:ALU>\t.\t.\tAC=3934;AF=0.785543;AFR_AF=0.7806;AMR_AF=0.804;AN=5008;CS=ALU_umary;EAS_AF=0.7609;EUR_AF=0.7992;MEINFO=AluUndef,89,280,-;NS=2504;SAS_AF=0.7904;SITEPOST=0.9891;SVLEN=191;SVTYPE=ALU;TSD=null\tGT\t1|1\n1\t4204667\tDEL_pindel_129\tACACCATTATCATTATCATCACCACCACCACCACCACCACACCACCACCAT\tA\t.\tPASS\tAC=2432;AF=0.485623;AFR_AF=0.4902;AMR_AF=0.4841;AN=5008;CS=DEL_pindel;EAS_AF=0.4841;END=4204717;EUR_AF=0.4841;NS=2504;SAS_AF=0.4836;SITEPOST=0.9999;SVTYPE=DEL\tGT\t1|0\n1\t6434482\tBI_GS_DEL1_B1_P0007_316\tG\t<CN0>\t100\tPASS\tAC=22;AF=0.00439297;AFR_AF=0.0008;AMR_AF=0.0029;AN=5008;CIEND=-43,43;CIPOS=-43,43;CS=DEL_union;EAS_AF=0.002;END=6445321;EUR_AF=0.0099;NS=2504;SAS_AF=0.0072;SVTYPE=DEL\tGT\t1|0\n1\t6438160\tBI_GS_DEL1_B1_P0007_317\tG\t<CN0>\t100\tPASS\tAC=30;AF=0.00599042;AFR_AF=0.0008;AMR_AF=0.0029;AN=5008;CIEND=0,1;CIPOS=0,1;CS=DEL_union;EAS_AF=0.001;END=6445897;EUR_AF=0.0169;MC=BI_GS_DEL1_B4_P0007_116,UW_VH_3195,EM_DL_DEL00475,YL_CN_GBR_40,UW_VH_15793;NS=2504;SAS_AF=0.0092;SVTYPE=DEL\tGT\t1|0\n1\t7570074\tBI_GS_DEL1_B5_P0008_654\tA\t<CN0>\t100\tPASS\tAC=810;AF=0.161741;AFR_AF=0.0658;AMR_AF=0.1153;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.2857;END=7571521;EUR_AF=0.1928;MC=SI_BD_86,UW_VH_6262,YL_CN_TSI_23,UW_VH_1671,EM_DL_DEL1004393,YL_CN_JPT_38;NS=2504;SAS_AF=0.1646;SVTYPE=DEL\tGT\t0|1\n1\t8200707\tDUP_gs_CNV_1_8200707_8211256\tG\t<CN2>\t.\tPASS\tAC=44;AF=0.00878594;AFR_AF=0.0015;AMR_AF=0.0086;AN=5008;CS=DUP_gs;EAS_AF=0.001;END=8211256;EUR_AF=0.0308;NS=2504;SAS_AF=0.0041;SITEPOST=0.9888;SVTYPE=DUP\tGT\t0|1\n1\t10482499\tUW_VH_0\tG\t<CN0>\t100\tPASS\tAC=1649;AF=0.329273;AFR_AF=0.4092;AMR_AF=0.3458;AN=5008;CIEND=0,468;CIPOS=-504,0;CS=DEL_union;EAS_AF=0.2837;END=10483790;EUR_AF=0.3091;MC=SI_BD_118,EM_DL_DEL1005915,YL_CN_ASW_57,YL_CN_STU_30,YL_CN_ESN_29,YL_CN_JPT_45,YL_CN_PEL_36,YL_CN_GIH_28;NS=2504;SAS_AF=0.2771;SVTYPE=DEL\tGT\t1|0\n1\t11682873\tUW_VH_58\tT\t<CN0>\t100\tPASS\tAC=2532;AF=0.505591;AFR_AF=0.3313;AMR_AF=0.6484;AN=5008;CIEND=0,435;CIPOS=-575,0;CS=DEL_union;EAS_AF=0.3929;END=11683189;EUR_AF=0.7803;MC=BI_GS_DEL1_B5_P0012_700;NS=2504;SAS_AF=0.4734;SVTYPE=DEL\tGT\t0|1\n1\t17026064\tDUP_gs_CNV_1_17026064_17052112\tG\t<CN2>,<CN3>,<CN4>,<CN5>\t.\tPASS\tAC=1463,2202,294,57;AF=0.292133,0.439696,0.0587061,0.0113818;AFR_AF=0.2829,0.4327,0.0522,0.0318;AMR_AF=0.304,0.4193,0.0389,0.0043;AN=5008;CS=DUP_gs;EAS_AF=0.1667,0.631,0.13,0.0079;END=17052112;EUR_AF=0.3588,0.3698,0.0368,0.002;NS=2504;SAS_AF=0.3569,0.3384,0.0307,0.002;SITEPOST=0.97635;SVTYPE=CNV\tGT\t2|1\n1\t17208619\tDUP_gs_CNV_1_17208619_17225378\tG\t<CN2>,<CN3>\t.\tPASS\tAC=2399,70;AF=0.479034,0.0139776;AFR_AF=0.5265,0.0378;AMR_AF=0.4438,0.0144;AN=5008;CS=DUP_gs;EAS_AF=0.6161,0.002;END=17225378;EUR_AF=0.4642,0.005;NS=2504;SAS_AF=0.3139,0.0031;SITEPOST=0.9999;SVTYPE=CNV\tGT\t1|0\n1\t17238417\tDUP_gs_CNV_1_17238417_17266696\tG\t<CN2>,<CN3>\t.\tPASS\tAC=2410,75;AF=0.48123,0.014976;AFR_AF=0.528,0.0408;AMR_AF=0.451,0.0115;AN=5008;CS=DUP_gs;EAS_AF=0.6161,0.004;END=17266696;EUR_AF=0.4622,0.007;NS=2504;SAS_AF=0.32,0.002;SITEPOST=1;SVTYPE=CNV\tGT\t1|0\n1\t17263114\tDUP_gs_CNV_1_17263114_17273513\tC\t<CN2>,<CN3>\t.\tPASS\tAC=2399,79;AF=0.479034,0.0157748;AFR_AF=0.5272,0.0424;AMR_AF=0.4438,0.0173;AN=5008;CS=DUP_gs;EAS_AF=0.6081,0.004;END=17273513;EUR_AF=0.4632,0.006;NS=2504;SAS_AF=0.3221,0.001;SITEPOST=0.9999;SVTYPE=CNV\tGT\t1|0\n1\t17676165\tBI_GS_DEL1_B5_P0018_582\tA\t<CN0>\t100\tPASS\tAC=1704;AF=0.340256;AFR_AF=0.0446;AMR_AF=0.389;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.5714;END=17677662;EUR_AF=0.3608;MC=YL_CN_BEB_49,EM_DL_DEL1008500,YL_CN_JPT_76,YL_CN_PEL_71,YL_CN_IBS_51,YL_CN_CEU_86,YL_CN_TSI_52,UW_VH_60;NS=2504;SAS_AF=0.4458;SVTYPE=DEL\tGT\t0|1\n1\t17684764\tDEL_pindel_317\tTATAAAAATATATTTTAGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCTGGGTAACACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGAGGTGGCGGGCGCCTGTAGTCCCAGCTACTCCGGAGGCTGAGGCAGGAGAATGGCGTGAACTCCAGGGGGCGGAGCCTGCAGTGAGCCGAGATTGCGCCACTGCACTCCAGCCTGGACGACAGCGAGACTCCGTCTCAAAAAAAAAAAAAAATAATAATAAAA\tT\t.\tPASS\tAC=3120;AF=0.623003;AFR_AF=0.7156;AMR_AF=0.5836;AN=5008;CS=DEL_pindel;EAS_AF=0.6567;END=17685086;EUR_AF=0.5795;MEINFO=AluYe,1,281,+;NS=2504;SAS_AF=0.5358;SITEPOST=0.9569;SVTYPE=DEL_ALU\tGT\t1|1\n1\t20864015\tBI_GS_DEL1_B5_P0021_1033\tT\t<CN0>\t100\tPASS\tAC=255;AF=0.0509185;AFR_AF=0.003;AMR_AF=0.049;AN=5008;CIEND=0,1;CIPOS=0,1;CS=DEL_union;EAS_AF=0.0476;END=20864732;EUR_AF=0.1123;MC=UW_VH_62,SI_BD_202;NS=2504;SAS_AF=0.0573;SVTYPE=DEL\tGT\t1|0\n1\t21786418\tBI_GS_DEL1_B3_P0022_20\tT\t<CN0>\t100\tPASS\tAC=3575;AF=0.713858;AFR_AF=0.4289;AMR_AF=0.7723;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.8552;END=21786695;EUR_AF=0.7296;NS=2504;SAS_AF=0.8957;SVTYPE=DEL\tGT\t1|0\n1\t23981142\tALU_umary_ALU_69\tC\t<INS:ME:ALU>\t.\t.\tAC=560;AF=0.111821;AFR_AF=0.1135;AMR_AF=0.1167;AN=5008;CS=ALU_umary;EAS_AF=0.002;EUR_AF=0.1938;MEINFO=AluYa4_5,1,270,+;NS=2504;SAS_AF=0.135;SITEPOST=1;SVLEN=269;SVTYPE=ALU;TSD=AACAGATGGGGCATC\tGT\t1|0\n1\t25592642\tDUP_gs_CNV_1_25592642_25661222\tT\t<CN0>,<CN2>\t.\tPASS\tAC=1032,11;AF=0.20607,0.00219649;AFR_AF=0.1581,0.0038;AMR_AF=0.2176,0.0014;AN=5008;CS=DUP_gs;EAS_AF=0.0466,0.002;END=25661222;EUR_AF=0.3996,0.002;MC=SI_BD_239,YL_CN_BEB_62;NS=2504;SAS_AF=0.228,0.001;SITEPOST=1;SVTYPE=CNV\tGT\t1|0\n1\t25688926\tDUP_gs_CNV_1_25688926_25700415\tG\t<CN0>,<CN2>\t.\tPASS\tAC=101,12;AF=0.0201677,0.00239617;AFR_AF=0.0492,0.0015;AMR_AF=0.013,0.0014;AN=5008;CS=DUP_gs;EAS_AF=0.0169,0.004;END=25700415;EUR_AF=0.007,0.001;NS=2504;SAS_AF=0.0031,0.0041;SITEPOST=1;SVTYPE=CNV\tGT\t0|1\n1\t27804112\tDEL_pindel_373\tTTAAAAATAAATAAATCGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCTACAGAGCGAGACTCCGTCTCAAAAAAAAAAAATAAATAAATAAAAAAAAAAA\tT\t.\tPASS\tAC=1160;AF=0.231629;AFR_AF=0.3132;AMR_AF=0.0533;AN=5008;CS=DEL_pindel;EAS_AF=0.3413;END=27804441;EUR_AF=0.1292;MEINFO=AluYa5,1,281,+;NS=2504;SAS_AF=0.2403;SITEPOST=0.9992;SVTYPE=DEL_ALU\tGT\t1|0\n1\t30298152\tDEL_pindel_400\tCGCACACACACACGTACTCACACCCATGCGCACACATACATATTCACACACAT\tC\t.\tPASS\tAC=799;AF=0.159545;AFR_AF=0.031;AMR_AF=0.2277;AN=5008;CS=DEL_pindel;EAS_AF=0.13;END=30298204;EUR_AF=0.2495;NS=2504;SAS_AF=0.2229;SITEPOST=0.9979;SVTYPE=DEL\tGT\t0|1\n1\t35101427\tBI_GS_DEL1_B2_P0036_63\tC\t<CN0>\t100\tPASS\tAC=585;AF=0.116813;AFR_AF=0.1301;AMR_AF=0.1585;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.0645;END=35111985;EUR_AF=0.1769;MC=UW_VH_6616,YL_CN_CHB_108,EM_DL_DEL02163,UW_VH_2777;NS=2504;SAS_AF=0.0613;SVTYPE=DEL\tGT\t1|0\n1\t35627104\tBI_GS_DEL1_B3_P0036_21\tT\t<CN0>\t100\tPASS\tAC=3130;AF=0.625;AFR_AF=0.4788;AMR_AF=0.6484;AN=5008;CIEND=-41,42;CIPOS=-41,42;CS=DEL_union;EAS_AF=0.3433;END=35627431;EUR_AF=0.8976;NS=2504;SAS_AF=0.816;SVTYPE=DEL\tGT\t1|1\n1\t36733282\tBI_GS_DEL1_B3_P0037_15\tT\t<CN0>\t100\tPASS\tAC=3956;AF=0.789936;AFR_AF=0.5129;AMR_AF=0.853;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.9435;END=36733515;EUR_AF=0.8757;NS=2504;SAS_AF=0.8732;SVTYPE=DEL\tGT\t1|1\n1\t36749217\tDEL_pindel_483\tTGCTGTTTATTTCAGATGAGTATCTAGAATCCTTGTCTTAGATGAATTGATTA\tT\t.\tPASS\tAC=2248;AF=0.448882;AFR_AF=0.4077;AMR_AF=0.4683;AN=5008;CS=DEL_pindel;EAS_AF=0.4444;END=36749269;EUR_AF=0.4622;NS=2504;SAS_AF=0.4816;SITEPOST=0.9997;SVTYPE=DEL\tGT\t0|1\n1\t37215810\tALU_umary_ALU_104\tA\t<INS:ME:ALU>\t.\t.\tAC=1217;AF=0.243011;AFR_AF=0.0545;AMR_AF=0.2695;AN=5008;CS=ALU_umary;EAS_AF=0.2688;EUR_AF=0.3767;MEINFO=AluUndef,1,278,+;NS=2504;SAS_AF=0.3149;SITEPOST=1;SVLEN=277;SVTYPE=ALU;TSD=AAAAAATTAAATTTA\tGT\t1|0\n1\t37816478\tUW_VH_11167\tA\t<CN0>\t100\tPASS\tAC=1956;AF=0.390575;AFR_AF=0.1089;AMR_AF=0.5476;AN=5008;CIEND=0,446;CIPOS=-475,0;CS=DEL_union;EAS_AF=0.3562;END=37816722;EUR_AF=0.5298;MC=UW_VH_1992,BI_GS_DEL1_B2_P0038_788;NS=2504;SAS_AF=0.5521;SVTYPE=DEL\tGT\t1|1\n1\t43857455\tDEL_pindel_537\tTAAAAAAATGAAACAAGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAAAACGGTGAAACCCTGTCTCTACTAAAAAAAATACAAAAAATTAGCTGGGCGTGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCTGAGATTGTGCCACTGCAGTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA\tT\t.\tPASS\tAC=2415;AF=0.482228;AFR_AF=0.5537;AMR_AF=0.5173;AN=5008;CS=DEL_pindel;EAS_AF=0.4296;END=43857791;EUR_AF=0.5159;MEINFO=AluY,1,281,+;NS=2504;SAS_AF=0.3804;SITEPOST=0.994;SVTYPE=DEL_ALU\tGT\t0|1\n1\t44059290\tINV_delly_INV00003623\tA\t<INV>\t.\tPASS\tAC=3575;AF=0.713858;AFR_AF=0.6407;AMR_AF=0.6441;AN=5008;CIEND=-61,61;CIPOS=-61,61;CS=INV_delly;EAS_AF=0.8552;END=44059950;EUR_AF=0.8012;IMPRECISE;NS=2504;SAS_AF=0.6268;SITEPOST=0.9982;SVTYPE=INV\tGT\t0|1\n1\t44208924\tALU_umary_ALU_127\tC\t<INS:ME:ALU>\t.\t.\tAC=511;AF=0.102037;AFR_AF=0.0628;AMR_AF=0.1081;AN=5008;CS=ALU_umary;EAS_AF=0.1091;EUR_AF=0.175;MEINFO=AluUndef,1,281,+;NS=2504;SAS_AF=0.0685;SITEPOST=1;SVLEN=280;SVTYPE=ALU;TSD=AAAACAGAGCCCCC\tGT\t0|1\n1\t46366107\tDEL_pindel_585\tTGATGTTGGATATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCCGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCTGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC\tT\t.\tPASS\tAC=3152;AF=0.629393;AFR_AF=0.6437;AMR_AF=0.6138;AN=5008;CS=DEL_pindel;EAS_AF=0.7054;END=46366436;EUR_AF=0.5567;MEINFO=AluYb6_2,1,281,-;NS=2504;SAS_AF=0.6176;SITEPOST=0.9745;SVTYPE=DEL_ALU\tGT\t1|0\n1\t49549776\tDEL_pindel_641\tGAGTCTCTAGGAAGTTCCAAATTTCCCCACATCTTCCTGTCTTCCGAGCCCTCCA\tG\t.\tPASS\tAC=1677;AF=0.334864;AFR_AF=0.4334;AMR_AF=0.389;AN=5008;CS=DEL_pindel;EAS_AF=0.1359;END=49549830;EUR_AF=0.3817;NS=2504;SAS_AF=0.32;SITEPOST=0.9979;SVTYPE=DEL\tGT\t1|0\n1\t50912662\tALU_umary_ALU_153\tC\t<INS:ME:ALU>\t.\t.\tAC=155;AF=0.0309505;AFR_AF=0.0492;AMR_AF=0.0144;AN=5008;CS=ALU_umary;EAS_AF=0.0238;EUR_AF=0.0408;MEINFO=AluYa5,8,281,-;NS=2504;SAS_AF=0.0153;SITEPOST=1;SVLEN=273;SVTYPE=ALU;TSD=CCCTAATAATTTTC\tGT\t0|1\n1\t56887702\tDEL_pindel_702\tTTATCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC\tT\t.\tPASS\tAC=3500;AF=0.698882;AFR_AF=0.6543;AMR_AF=0.6441;AN=5008;CS=DEL_pindel;EAS_AF=0.7738;END=56888019;EUR_AF=0.6829;MEINFO=AluYa5,1,281,-;NS=2504;SAS_AF=0.7372;SITEPOST=0.9893;SVTYPE=DEL_ALU\tGT\t0|1\n1\t58071869\tALU_umary_ALU_182\tT\t<INS:ME:ALU>\t.\t.\tAC=980;AF=0.195687;AFR_AF=0.0469;AMR_AF=0.2781;AN=5008;CS=ALU_umary;EAS_AF=0.1935;EUR_AF=0.2982;MEINFO=AluYa1_1,87,275,-;NS=2504;SAS_AF=0.2352;SITEPOST=1;SVLEN=188;SVTYPE=ALU;TSD=TTTTCCGGTATTTTT\tGT\t0|1\n1\t58343211\tDEL_pindel_718\tTGATTTATTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCCGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCACCACCGCGCCCGGCTAATTTTTTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGTCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC\tT\t.\tPASS\tAC=2533;AF=0.505791;AFR_AF=0.5613;AMR_AF=0.5908;AN=5008;CS=DEL_pindel;EAS_AF=0.4911;END=58343535;EUR_AF=0.496;MEINFO=AluYb6_2,1,281,-;NS=2504;SAS_AF=0.3957;SITEPOST=0.9958;SVTYPE=DEL_ALU\tGT\t1|0\n1\t58743910\tBI_GS_DEL1_B1_P0059_752\tA\t<CN0>\t100\tPASS\tAC=4618;AF=0.922125;AFR_AF=0.885;AMR_AF=0.9366;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.9395;END=58744826;EUR_AF=0.9115;MC=SI_BD_432,YL_CN_STU_100,EM_DL_DEL1024894,DEL_pindel_727;NS=2504;SAS_AF=0.955;SVTYPE=DEL\tGT\t1|1\n1\t60046725\tBI_GS_DEL1_B5_P0061_66\tA\t<CN0>\t100\tPASS\tAC=316;AF=0.063099;AFR_AF=0.1573;AMR_AF=0.0202;AN=5008;CIEND=0,1;CIPOS=0,1;CS=DEL_union;EAS_AF=0.0248;END=60050638;EUR_AF=0.0219;MC=YL_CN_BEB_84,UW_VH_3196,SI_BD_440,UW_VH_21106,UW_VH_16990,UW_VH_13309;NS=2504;SAS_AF=0.0481;SVTYPE=DEL\tGT\t1|0\n1\t60048628\tUW_VH_10127\tC\t<CN0>\t100\tPASS\tAC=1141;AF=0.227835;AFR_AF=0.2958;AMR_AF=0.1282;AN=5008;CIEND=0,384;CIPOS=-445,0;CS=DEL_union;EAS_AF=0.1667;END=60049655;EUR_AF=0.1292;MC=UW_VH_2563,BI_GS_DEL1_B2_P0061_40,SI_BD_441;NS=2504;SAS_AF=0.3712;SVTYPE=DEL\tGT\t1|0\n1\t62113386\tUW_VH_11751\tC\t<CN0>\t100\tPASS\tAC=556;AF=0.111022;AFR_AF=0.0159;AMR_AF=0.2291;AN=5008;CIEND=0,385;CIPOS=-343,0;CS=DEL_union;EAS_AF=0.1766;END=62119528;EUR_AF=0.1421;MC=UW_VH_19502,UW_VH_8231,EM_DL_DEL02790,YL_CN_MXL_93,SI_BD_450,BI_GS_DEL1_B3_P0063_6,UW_VH_73,UW_VH_5191;NS=2504;SAS_AF=0.0562;SVTYPE=DEL\tGT\t0|1\n1\t62390586\tDEL_pindel_764\tCAAAAAGACAGACAGGCGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCACGAGGTCAGGAGATCGAGACCAAGGTGAAACCCCGTCTCTACTAAAAATACAAAAAGTTAGCCGGGCGTAGTGGCGGGCGCCTGTGGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCGCGCCACTGCACTCCAGCCTGGGTGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA\tC\t.\tPASS\tAC=3767;AF=0.752196;AFR_AF=0.7458;AMR_AF=0.745;AN=5008;CS=DEL_pindel;EAS_AF=0.7976;END=62390935;EUR_AF=0.7078;MEINFO=AluYa1_1,1,281,+;NS=2504;SAS_AF=0.7648;SITEPOST=0.9665;SVTYPE=DEL_ALU\tGT\t1|1\n1\t62654739\tBI_GS_DEL1_B4_P0063_101\tC\t<CN0>\t100\tPASS\tAC=525;AF=0.104832;AFR_AF=0.0038;AMR_AF=0.1282;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.3641;END=62657162;EUR_AF=0.0318;MC=YL_CN_CDX_97,YL_CN_CHS_129,EM_DL_DEL02810,UW_VH_2564;NS=2504;SAS_AF=0.0327;SVTYPE=DEL\tGT\t0|1\n1\t63151819\tDEL_pindel_767\tAAGTAATAACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCCGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTGTATTTTTTTTTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC\tA\t.\tPASS\tAC=3503;AF=0.699481;AFR_AF=0.6611;AMR_AF=0.7277;AN=5008;CS=DEL_pindel;EAS_AF=0.7044;END=63152158;EUR_AF=0.7197;MEINFO=AluYb6_2,1,281,-;NS=2504;SAS_AF=0.7055;SITEPOST=0.95775;SVTYPE=DEL_ALU\tGT\t1|1\n1\t64958078\tALU_umary_ALU_211\tT\t<INS:ME:ALU>\t.\t.\tAC=1745;AF=0.348442;AFR_AF=0.1293;AMR_AF=0.3991;AN=5008;CS=ALU_umary;EAS_AF=0.4435;EUR_AF=0.4612;MEINFO=AluUndef,1,280,-;NS=2504;SAS_AF=0.3947;SITEPOST=1;SVLEN=279;SVTYPE=ALU;TSD=CCCCCTATTGTTTTCTT\tGT\t0|1\n1\t65909622\tDEL_pindel_814\tAAAGACCTGATACTTTTTTTTTTTTTTTTTTTTTATACTCTAAGTTTTAGGGTACATGTGCACATTGTGCAGGTTAGTTACATATGTATACATGTGCCATGCTGGTGCGCTGCACCCACTAATGTGTCATCTAGCATTAGGTATATCTCCCAATGCTATCCCTCCCCCCTCCCCCGACCCCACCACAGTCCCCAGAGTGTGATATTCCCCTTCCTGTGTCCATGTGATCTCATTGTTCAATTCCCACCTATGAGTGAGAATATGCGGTGTT\tA\t.\tPASS\tAC=1991;AF=0.397564;AFR_AF=0.3979;AMR_AF=0.5043;AN=5008;CS=DEL_pindel;EAS_AF=0.1349;END=65909892;EUR_AF=0.4841;MEINFO=LINE1,5783,6019,-;NS=2504;SAS_AF=0.5031;SITEPOST=0.9965;SVTYPE=DEL_LINE1\tGT\t0|1\n1\t68007970\tBI_GS_DEL1_B3_P0069_2\tT\t<CN0>\t100\tPASS\tAC=3492;AF=0.697284;AFR_AF=0.5091;AMR_AF=0.7003;AN=5008;CIEND=-3,4;CIPOS=-3,4;CS=DEL_union;EAS_AF=0.8294;END=68008811;EUR_AF=0.7227;MC=EM_DL_DEL1028778,UW_VH_78,SI_BD_477;NS=2504;SAS_AF=0.7873;SVTYPE=DEL\tGT\t1|1\n1\t69806992\tDEL_pindel_857\tTAAAGGGGAGTTCGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCATGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAA\tT\t.\tPASS\tAC=3593;AF=0.717452;AFR_AF=0.6831;AMR_AF=0.7291;AN=5008;CS=DEL_pindel;EAS_AF=0.7431;END=69807311;EUR_AF=0.7386;MEINFO=AluYa5,1,281,+;NS=2504;SAS_AF=0.7076;SITEPOST=0.9284;SVTYPE=DEL_ALU\tGT\t1|1\n1\t69943715\tDEL_pindel_860\tGCCCTCTGTCTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCATTTCTTAGCCGGGATGGTCTCAATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGC\tG\t.\tPASS\tAC=3050;AF=0.609026;AFR_AF=0.6142;AMR_AF=0.6095;AN=5008;CS=DEL_pindel;EAS_AF=0.6776;END=69944021;EUR_AF=0.6014;MEINFO=AluYa5,2,281,-;NS=2504;SAS_AF=0.5389;SITEPOST=0.9866;SVTYPE=DEL_ALU\tGT\t1|0\n1\t70027325\tDEL_pindel_863\tATAATAGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGCGGTGGCGGGCGCCTGTAGTCCCAGCTACTGGGGAGGCTGAGGCAGGAGAATGGCGTTGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATAATAATAATAATAAT\tA\t.\tPASS\tAC=2302;AF=0.459665;AFR_AF=0.3767;AMR_AF=0.4712;AN=5008;CS=DEL_pindel;EAS_AF=0.4365;END=70027682;EUR_AF=0.5089;MEINFO=AluYb6_2,1,281,+;NS=2504;SAS_AF=0.5368;SITEPOST=0.9834;SVTYPE=DEL_ALU\tGT\t1|0\n1\t70061670\tALU_umary_ALU_224\tG\t<INS:ME:ALU>\t.\t.\tAC=801;AF=0.159944;AFR_AF=0.0673;AMR_AF=0.1427;AN=5008;CS=ALU_umary;EAS_AF=0.255;EUR_AF=0.2217;MEINFO=AluYb8,1,274,+;NS=2504;SAS_AF=0.136;SITEPOST=1;SVLEN=273;SVTYPE=ALU;TSD=ATAAAGTAGCTTGTG\tGT\t0|1\n1\t70946189\tDEL_pindel_872\tTATGGTTATGTTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGCGATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCTACCACGCCCGGCTAATTTTTTGTATTTTTTTTTTTTTTAGTAGAGACGGGGTTTCACCGTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC\tT\t.\tPASS\tAC=4018;AF=0.802316;AFR_AF=0.7753;AMR_AF=0.8516;AN=5008;CS=DEL_pindel;EAS_AF=0.7946;END=70946520;EUR_AF=0.8141;MEINFO=AluYc1,1,281,-;NS=2504;SAS_AF=0.7996;SITEPOST=0.97;SVTYPE=DEL_ALU\tGT\t0|1\n1\t71148798\tDEL_pindel_875\tCTGAAAAAAATGACATTGGTAATTTCATAGGAATTGTACTGAATCCGTAGATTACTTTGGGCATTATGGTCCTTTTAACAATATTGATTCTTTCAATCCATGAGCATGGAATGTTTTTCCATTTGTTTGTGTCATTTACAATTTCTTTCATCAGTGTTTTGTAGTTCTCCTTGTAAAGATCTTTCTTCTTGGTTAAATATATTTCTAGCTAGTTTATTTTTTGTAGCTATTGTAAATGGGATTGAGTTCT\tC\t.\tPASS\tAC=1355;AF=0.270567;AFR_AF=0.3533;AMR_AF=0.2738;AN=5008;CS=DEL_pindel;EAS_AF=0.2927;END=71149047;EUR_AF=0.1173;NS=2504;SAS_AF=0.2914;SITEPOST=0.9998;SVTYPE=DEL\tGT\t1|0\n1\t71741319\tDEL_pindel_885\tAGTTCCTTGTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCCAGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACACCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAG\tA\t.\tPASS\tAC=4214;AF=0.841454;AFR_AF=0.8268;AMR_AF=0.8775;AN=5008;CS=DEL_pindel;EAS_AF=0.8472;END=71741629;EUR_AF=0.8459;MEINFO=AluYb8,37,281,-;NS=2504;SAS_AF=0.8252;SITEPOST=0.967;SVTYPE=DEL_ALU\tGT\t1|1\n1\t72755694\tUW_VH_10235\tT\t<CN0>\t100\tPASS\tAC=413;AF=0.082468;AFR_AF=0.087;AMR_AF=0.0807;AN=5008;CIEND=0,347;CIPOS=-463,0;CS=DEL_union;EAS_AF=0.0129;END=72764095;EUR_AF=0.174;MC=UW_VH_2862,BI_GS_DEL1_B4_P0073_145,UW_VH_1996,YL_CN_GWD_133;NS=2504;SAS_AF=0.0552;SVTYPE=DEL\tGT\t1|0\n1\t72766343\tBI_GS_CNV_1_72766343_72811815\tT\t<CN0>\t100\tPASS\tAC=3383;AF=0.675519;AFR_AF=0.531;AMR_AF=0.7032;AN=5008;CIEND=0,500;CIPOS=-500,0;CS=DEL_union;EAS_AF=0.9335;END=72811815;EUR_AF=0.6412;MC=YL_CN_BEB_91,UW_VH_1948,UW_VH_6511,SI_BD_500,UW_VH_3865,UW_VH_20412,UW_VH_10860,UW_VH_14488,UW_VH_5683;NS=2504;SAS_AF=0.6207;SVTYPE=DEL\tGT\t1|0\n1\t72778537\tBI_GS_DEL1_B3_P0073_40\tG\t<CN0>\t100\tPASS\tAC=3384;AF=0.675719;AFR_AF=0.531;AMR_AF=0.7032;AN=5008;CIEND=-64,64;CIPOS=-64,64;CS=DEL_union;EAS_AF=0.9335;END=72784594;EUR_AF=0.6412;MC=EM_DL_DEL03014;NS=2504;SAS_AF=0.6217;SVTYPE=DEL\tGT\t0|1\n1\t74312425\tBI_GS_DEL1_B2_P0075_218\tA\t<CN0>\t100\tPASS\tAC=1894;AF=0.378195;AFR_AF=0.2496;AMR_AF=0.3386;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.5357;END=74312678;EUR_AF=0.3539;MC=DEL_pindel_917,UW_VH_84;NS=2504;SAS_AF=0.4427;SVTYPE=DEL\tGT\t1|0\n1\t74471655\tALU_umary_ALU_252\tC\t<INS:ME:ALU>\t.\t.\tAC=328;AF=0.0654952;AFR_AF=0.1104;AMR_AF=0.0648;AN=5008;CS=ALU_umary;EAS_AF=0;EUR_AF=0.0974;MEINFO=AluUndef,7,281,+;NS=2504;SAS_AF=0.0399;SITEPOST=1;SVLEN=274;SVTYPE=ALU;TSD=AAAAATTTAGTCTC\tGT\t0|1\n1\t75192907\tL1_umary_LINE1_61\tC\t<INS:ME:LINE1>\t.\t.\tAC=946;AF=0.188898;AFR_AF=0.0688;AMR_AF=0.3314;AN=5008;CS=L1_umary;EAS_AF=0.0069;EUR_AF=0.4672;MEINFO=LINE1,2358,6015,-;NS=2504;SAS_AF=0.1513;SITEPOST=1;SVLEN=3657;SVTYPE=LINE1;TSD=CCGTATTAGTTCATTTTC\tGT\t1|0\n1\t78649157\tUW_VH_86\tA\t<CN0>\t100\tPASS\tAC=474;AF=0.0946486;AFR_AF=0.1384;AMR_AF=0.1571;AN=5008;CIEND=0,362;CIPOS=-300,0;CS=DEL_union;EAS_AF=0.004;END=78654148;EUR_AF=0.0716;MC=EM_DL_DEL03111,YL_CN_FIN_125,BI_GS_DEL1_B1_P0079_488,SI_BD_525;NS=2504;SAS_AF=0.1084;SVTYPE=DEL\tGT\t0|1\n1\t79331208\tALU_umary_ALU_279\tC\t<INS:ME:ALU>\t.\t.\tAC=552;AF=0.110224;AFR_AF=0.0295;AMR_AF=0.1888;AN=5008;CS=ALU_umary;EAS_AF=0.0893;EUR_AF=0.1362;MEINFO=AluYa5,3,281,-;NS=2504;SAS_AF=0.1585;SITEPOST=1;SVLEN=278;SVTYPE=ALU;TSD=TGAGCATATTTTC\tGT\t1|0\n1\t79582082\tALU_umary_ALU_286\tT\t<INS:ME:ALU>\t.\t.\tAC=3092;AF=0.617412;AFR_AF=0.6346;AMR_AF=0.621;AN=5008;CS=ALU_umary;EAS_AF=0.6548;EUR_AF=0.5875;MEINFO=AluYb11,4,277,-;NS=2504;SAS_AF=0.5838;SITEPOST=1;SVLEN=273;SVTYPE=ALU;TSD=GATTTTT\tGT\t1|0\n1\t80299106\tALU_umary_ALU_288\tT\t<INS:ME:ALU>\t.\t.\tAC=988;AF=0.197284;AFR_AF=0.053;AMR_AF=0.3357;AN=5008;CS=ALU_umary;EAS_AF=0.0327;EUR_AF=0.3757;MEINFO=AluYb11,33,281,-;NS=2504;SAS_AF=0.2802;SITEPOST=1;SVLEN=248;SVTYPE=ALU;TSD=GCATTGTTTT\tGT\t0|1\n1\t81194341\tDEL_pindel_967\tGAAAACTGGCTGGTGGCCGGGCGCGGTGGCTCACGCCTGTAGTCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTAGGGAGGCTGAGGCAGGAGAATGGTGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCGCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA\tG\t.\tPASS\tAC=2616;AF=0.522364;AFR_AF=0.5983;AMR_AF=0.3963;AN=5008;CS=DEL_pindel;EAS_AF=0.5903;END=81194668;EUR_AF=0.4225;MEINFO=AluYa3_1,1,281,+;NS=2504;SAS_AF=0.5419;SITEPOST=0.9982;SVTYPE=DEL_ALU\tGT\t0|1\n1\t83042644\tDEL_pindel_992\tTTTATATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCCGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC\tT\t.\tPASS\tAC=3180;AF=0.634984;AFR_AF=0.7511;AMR_AF=0.6455;AN=5008;CS=DEL_pindel;EAS_AF=0.5446;END=83042964;EUR_AF=0.5765;MEINFO=AluYa5,1,281,-;NS=2504;SAS_AF=0.6237;SITEPOST=0.9744;SVTYPE=DEL_ALU\tGT\t1|0\n1\t84517858\tYL_CN_MXL_110\tA\t<CN0>\t100\tPASS\tAC=3754;AF=0.749601;AFR_AF=0.7451;AMR_AF=0.7161;AN=5008;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0.871;END=84524770;EUR_AF=0.7207;MC=YL_CN_ASW_150,YL_CN_ACB_138,YL_CN_IBS_104;MEINFO=LINE1,2,6019,-;NS=2504;SAS_AF=0.684;SVTYPE=DEL_LINE1\tGT\t1|1\n1\t85620127\tALU_umary_ALU_319\tT\t<INS:ME:ALU>\t.\t.\tAC=2420;AF=0.483227;AFR_AF=0.4652;AMR_AF=0.4611;AN=5008;CS=ALU_umary;EAS_AF=0.506;EUR_AF=0.504;MEINFO=AluUndef,1,279,-;NS=2504;SAS_AF=0.4785;SITEPOST=1;SVLEN=278;SVTYPE=ALU;TSD=TCT\tGT\t0|1\n1\t85980461\tDUP_gs_CNV_1_85980461_86006144\tT\t<CN2>,<CN3>\t.\tPASS\tAC=4947,42;AF=0.987819,0.00838658;AFR_AF=0.9675,0.0272;AMR_AF=0.9957,0.0029;AN=5008;CS=DUP_gs;EAS_AF=0.994,0;END=86006144;EUR_AF=0.994,0.003;NS=2504;SAS_AF=0.9969,0.001;SITEPOST=1;SVTYPE=CNV\tGT\t1|1\n1\t86405790\tDEL_pindel_1016\tTAAAAAGTGCCATAAGGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTGGTAGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCGCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA\tT\t.\tPASS\tAC=2925;AF=0.584065;AFR_AF=0.4909;AMR_AF=0.6282;AN=5008;CS=DEL_pindel;EAS_AF=0.6637;END=86406118;EUR_AF=0.6014;MEINFO=AluYc1,1,281,+;NS=2504;SAS_AF=0.5787;SITEPOST=0.9948;SVTYPE=DEL_ALU\tGT\t0|1\n1\t86740980\tDEL_pindel_1025\tTAAATCTACACCAGTTAGAATGGCAATCATTAAAAAGTCAGGAAACAACAGGTGCTGGAGAGGATGCGGAGAAATAGGAACACTTTTACACTGTTGGTGGGACTGTAAACTAGTTCAACCATTGTGGAAGTCAGTGTGGCGATTCCTCAGGGATCTAGAACTAGAAATACCATTTGACCCAGCCATCCCATTACTGGGTATATACCCAAATGAGTATAAATCATGCTGCTATAAAGACACATGCACACGTATGTTTATTGCGGCACTATTCACAATAGCAAAGACTTGGAACCAACCCAAATGTCCAACAATGATAGACTGGATTAAGAAAATGTGGCACATATACACCATGGAATACTATGCAGCCATAAAAAATGATGAGTTCATATCCTTTGTAGGGACATGGATGAAATTGGAAACCATCATTCTCAGTAAACTATCGCAAGAACAAAAAACCAAACACCGCATATTCTCACTCATAGGTGGGAATTGAACAATGAGATCACATGGACACAGGAAGGGGAATATCACACTCTGGGGACTGTGGTGGGGTCGGGGGAGGGGGGAGGGATAGCATTGGGAGATATACCTAATGCTAGATGACACATTAGTGGGTGCAGCGCACCAGCATGGCACATGTATACATATGTAACTAACCTGCACAATGTGCACATGTACCCTAAAACTTAGAGTATAATAAAAAAAAAAAAAAAAAAAA\tT\t.\tPASS\tAC=4244;AF=0.847444;AFR_AF=0.9327;AMR_AF=0.6643;AN=5008;CS=DEL_pindel;EAS_AF=0.9583;END=86741697;EUR_AF=0.7316;MEINFO=LINE1,5537,5600,+;NS=2504;SAS_AF=0.8671;SITEPOST=0.9994;SVTYPE=DEL_LINE1\tGT\t0|1\n1\t89475930\tUW_VH_1\tG\t<CN0>\t100\tPASS\tAC=1000;AF=0.199681;AFR_AF=0.0461;AMR_AF=0.2421;AN=5008;CIEND=0,438;CIPOS=-482,0;CS=DEL_union;EAS_AF=0.2034;END=89478613;EUR_AF=0.3201;MC=SI_BD_588,YL_CN_KHV_169,EM_DL_DEL03344,BI_GS_DEL1_B1_P0090_402;NS=2504;SAS_AF=0.2495;SVTYPE=DEL\tGT\t1|1\n1\t91624771\tDEL_pindel_1065\tTAAAAGTGGAGAATCTTCTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACGAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAA\tT\t.\tPASS\tAC=3741;AF=0.747005;AFR_AF=0.7398;AMR_AF=0.755;AN=5008;CS=DEL_pindel;EAS_AF=0.7282;END=91625054;EUR_AF=0.7714;MEINFO=AluY,37,281,+;NS=2504;SAS_AF=0.7454;SITEPOST=0.9476;SVTYPE=DEL_ALU\tGT\t1|1\n1\t92232051\tUW_VH_25108\tT\t<CN0>\t100\tPASS\tAC=1397;AF=0.278954;AFR_AF=0.3253;AMR_AF=0.2882;AN=5008;CIEND=0,326;CIPOS=-324,0;CS=DEL_union;EAS_AF=0.0556;END=92233331;EUR_AF=0.3091;MC=YL_CN_TSI_109,BI_GS_DEL1_B2_P0093_196,SI_BD_601,YL_CN_IBS_109,UW_VH_3176,UW_VH_2446,EM_DL_DEL1039023,YL_CN_ESN_120,UW_VH_19170,YL_CN_ITU_131,YL_CN_CLM_101,UW_VH_9803;NS=2504;SAS_AF=0.409;SVTYPE=DEL\tGT\t1|0\n1\t93167530\tALU_umary_ALU_356\tT\t<INS:ME:ALU>\t.\t.\tAC=2240;AF=0.447284;AFR_AF=0.4539;AMR_AF=0.4135;AN=5008;CS=ALU_umary;EAS_AF=0.4712;EUR_AF=0.4433;MEINFO=AluUndef,1,281,-;NS=2504;SAS_AF=0.4417;SITEPOST=1;SVLEN=280;SVTYPE=ALU;TSD=TATGTTATTTT\tGT\t1|0\n1\t93498232\tALU_umary_ALU_357\tT\t<INS:ME:ALU>\t.\t.\tAC=2871;AF=0.573283;AFR_AF=0.5734;AMR_AF=0.6268;AN=5008;CS=ALU_umary;EAS_AF=0.4732;EUR_AF=0.661;MEINFO=AluYa5,3,280,-;NS=2504;SAS_AF=0.5481;SITEPOST=1;SVLEN=277;SVTYPE=ALU;TSD=AGATTCCTTTTTCTAATTCT\tGT\t1|1\n1\t100551660\tALU_umary_ALU_398\tG\t<INS:ME:ALU>\t.\t.\tAC=151;AF=0.0301518;AFR_AF=0.0658;AMR_AF=0.0159;AN=5008;CS=ALU_umary;EAS_AF=0;EUR_AF=0.0447;MEINFO=AluUndef,1,281,+;NS=2504;SAS_AF=0.0082;SITEPOST=1;SVLEN=280;SVTYPE=ALU;TSD=AAATTAATACAAATGAG\tGT\t0|1\n1\t100994221\tALU_umary_ALU_402\tG\t<INS:ME:ALU>\t.\t.\tAC=3106;AF=0.620208;AFR_AF=0.3767;AMR_AF=0.7075;AN=5008;CS=ALU_umary;EAS_AF=0.7153;EUR_AF=0.6998;MEINFO=AluUndef,1,274,+;NS=2504;SAS_AF=0.7076;SITEPOST=1;SVLEN=273;SVTYPE=ALU;TSD=AAAATTTCATG\tGT\t1|1\n1\t105255038\tBI_GS_DEL1_B1_P0106_186\tG\t<CN0>\t100\tPASS\tAC=1340;AF=0.267572;AFR_AF=0.3071;AMR_AF=0.1744;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.5159;END=105256195;EUR_AF=0.0785;MC=UW_VH_2978,YL_CN_STU_135,UW_VH_21745;NS=2504;SAS_AF=0.2188;SVTYPE=DEL\tGT\t1|0\n1\t105667567\tBI_GS_DEL1_B5_P0106_645\tG\t<CN0>\t100\tPASS\tAC=654;AF=0.130591;AFR_AF=0.174;AMR_AF=0.0677;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.1538;END=105668446;EUR_AF=0.1034;MC=UW_VH_2190,SI_BD_665;NS=2504;SAS_AF=0.1207;SVTYPE=DEL\tGT\t1|0\n1\t106015797\tUW_VH_11498\tT\t<CN0>\t100\tPASS\tAC=2027;AF=0.404752;AFR_AF=0.4834;AMR_AF=0.3833;AN=5008;CIEND=0,426;CIPOS=-493,0;CS=DEL_union;EAS_AF=0.5099;END=106023398;EUR_AF=0.3111;MC=EM_DL_DEL03675,UW_VH_4841,UW_VH_20934,BI_GS_DEL1_B2_P0107_13,SI_BD_666,YL_CN_CHS_165;NS=2504;SAS_AF=0.3016;SVTYPE=DEL\tGT\t1|0\n1\t110187159\tEM_DL_DEL04008\tA\t<CN0>\t100\tPASS\tAC=3026;AF=0.604233;AFR_AF=0.5424;AMR_AF=0.7161;AN=5008;CIEND=-150,150;CIPOS=-150,150;CS=DEL_union;EAS_AF=0.6716;END=110191392;EUR_AF=0.5895;MC=UW_VH_11157,UW_VH_105,UW_VH_14383,UW_VH_16373,UW_VH_15594,UW_VH_14446,UW_VH_17415,UW_VH_16704,UW_VH_18787,UW_VH_17281,UW_VH_10869,UW_VH_4796,UW_VH_20579,UW_VH_3222,SI_BD_694,UW_VH_21775,UW_VH_4341,UW_VH_14511,BI_GS_DEL1_B1_P0111_170,UW_VH_9883,YL_CN_CHS_170,UW_VH_15855,UW_VH_12772,UW_VH_13558,UW_VH_11475,UW_VH_5957,UW_VH_19437,UW_VH_11432,UW_VH_15395,UW_VH_21999,UW_VH_11170,UW_VH_15110;NS=2504;SAS_AF=0.5542;SVTYPE=DEL\tGT\t1|1\n1\t110225019\tYL_CN_MSL_117\tC\t<CN0>\t100\tPASS\tAC=3177;AF=0.634385;AFR_AF=0.4962;AMR_AF=0.6902;AN=5008;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0.753;END=110245280;EUR_AF=0.7227;NS=2504;SAS_AF=0.5685;SVTYPE=DEL\tGT\t1|1\n1\t110230075\tDUP_gs_CNV_1_110230075_110241247\tG\t<CN0>,<CN2>\t.\tPASS\tAC=3196,23;AF=0.638179,0.00459265;AFR_AF=0.497,0.0068;AMR_AF=0.6945,0.0043;AN=5008;CS=DUP_gs;EAS_AF=0.7619,0.005;END=110241247;EUR_AF=0.7276,0.003;NS=2504;SAS_AF=0.5695,0.0031;SITEPOST=1;SVTYPE=CNV\tGT\t1|1\n1\t112074694\tDEL_pindel_1254\tAGGAAAGATTATAGCCCTGTACTCTGCTTCTTTGGCGTGGTTCCTTTCCTAGCTTAAGGTAGTTTTCTCACATGCATGTGCTGACCAGCACTCACTCAGCTGAAGGCTTCGG\tA\t.\tPASS\tAC=1289;AF=0.257388;AFR_AF=0.0968;AMR_AF=0.4438;AN=5008;CS=DEL_pindel;EAS_AF=0.252;END=112074805;EUR_AF=0.2704;NS=2504;SAS_AF=0.3344;SITEPOST=0.9992;SVTYPE=DEL\tGT\t1|0\n1\t112691740\tUW_VH_11519\tA\t<CN0>\t100\tPASS\tAC=1519;AF=0.303315;AFR_AF=0.025;AMR_AF=0.402;AN=5008;CIEND=0,466;CIPOS=-465,0;CS=DEL_union;EAS_AF=0.377;END=112704718;EUR_AF=0.3181;MC=UW_VH_5904,UW_VH_5684,EM_DL_DEL04047,BI_GS_DEL1_B5_P0113_972,UW_VH_9919,UW_VH_20563,UW_VH_18225,YL_CN_CHS_174,UW_VH_11717,UW_VH_1950;NS=2504;SAS_AF=0.5184;SVTYPE=DEL\tGT\t1|1\n1\t112834896\tYL_CN_ACB_172\tC\t<CN0>\t100\tPASS\tAC=4374;AF=0.873403;AFR_AF=0.7625;AMR_AF=0.853;AN=5008;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0.9256;END=112837824;EUR_AF=0.9344;MC=YL_CN_CDX_136,YL_CN_LWK_130;NS=2504;SAS_AF=0.9213;SVTYPE=DEL\tGT\t1|1\n1\t112992009\tALU_umary_ALU_454\tT\t<INS:ME:ALU>\t.\t.\tAC=1924;AF=0.384185;AFR_AF=0.2458;AMR_AF=0.4078;AN=5008;CS=ALU_umary;EAS_AF=0.3274;EUR_AF=0.4801;MEINFO=AluUndef,1,281,-;NS=2504;SAS_AF=0.5143;SITEPOST=1;SVLEN=280;SVTYPE=ALU;TSD=CCAGACACGTTATTT\tGT\t1|0\n1\t113799625\tBI_GS_DEL1_B2_P0114_484\tG\t<CN0>\t100\tPASS\tAC=3804;AF=0.759585;AFR_AF=0.4818;AMR_AF=0.8141;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.9653;END=113800089;EUR_AF=0.837;MC=UW_VH_107,DEL_pindel_1283;NS=2504;SAS_AF=0.8047;SVTYPE=DEL\tGT\t1|0\n1\t118091036\tDEL_pindel_1333\tTAAGACACCCAGAAGCCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAA\tT\t.\tPASS\tAC=3501;AF=0.699081;AFR_AF=0.6513;AMR_AF=0.7896;AN=5008;CS=DEL_pindel;EAS_AF=0.7401;END=118091258;EUR_AF=0.6988;MEINFO=AluY,79,281,+;NS=2504;SAS_AF=0.6575;SITEPOST=0.9846;SVTYPE=DEL_ALU\tGT\t1|1\n1\t119080704\tALU_umary_ALU_481\tT\t<INS:ME:ALU>\t.\t.\tAC=985;AF=0.196685;AFR_AF=0.0703;AMR_AF=0.1974;AN=5008;CS=ALU_umary;EAS_AF=0.125;EUR_AF=0.3588;MEINFO=AluYa5,1,279,-;NS=2504;SAS_AF=0.274;SITEPOST=1;SVLEN=278;SVTYPE=ALU;TSD=GCAACCAGCTTTT\tGT\t1|0\n1\t143984622\tDUP_gs_CNV_1_143984622_144094733\tA\t<CN2>,<CN3>\t.\tPASS\tAC=4791,41;AF=0.956669,0.0081869;AFR_AF=0.8873,0.0106;AMR_AF=0.9597,0.013;AN=5008;CS=DUP_gs;EAS_AF=0.9762,0.0119;END=144094733;EUR_AF=0.992,0.004;NS=2504;SAS_AF=0.9918,0.002;SITEPOST=1;SVTYPE=CNV\tGT\t1|1\n1\t144468090\tBI_GS_CNV_1_144468090_144480623\tT\t<CN0>\t100\tPASS\tAC=1930;AF=0.385383;AFR_AF=0.1944;AMR_AF=0.4712;AN=5008;CIEND=0,500;CIPOS=-500,0;CS=DEL_union;EAS_AF=0.3839;END=144480623;EUR_AF=0.3956;NS=2504;SAS_AF=0.5736;SVTYPE=DEL\tGT\t0|1\n1\t144691202\tDUP_gs_CNV_1_144691202_144710622\tG\t<CN2>,<CN3>\t.\tPASS\tAC=3434,2;AF=0.685703,0.00039936;AFR_AF=0.4387,0;AMR_AF=0.7147,0;AN=5008;CS=DUP_gs;EAS_AF=0.8859,0;END=144710622;EUR_AF=0.7396,0;NS=2504;SAS_AF=0.7372,0.002;SITEPOST=0.9969;SVTYPE=CNV\tGT\t0|1\n1\t144839080\tDUP_gs_CNV_1_144839080_144849492\tC\t<CN2>,<CN3>\t.\tPASS\tAC=4981,1;AF=0.994609,0.00019968;AFR_AF=0.9909,0.0008;AMR_AF=0.9971,0;AN=5008;CS=DUP_gs;EAS_AF=0.9881,0;END=144849492;EUR_AF=0.999,0;NS=2504;SAS_AF=1,0;SITEPOST=1;SVTYPE=CNV\tGT\t1|1\n1\t144862244\tDUP_gs_CNV_1_144862244_144892802\tA\t<CN2>,<CN3>\t.\tPASS\tAC=5007,1;AF=0.9998,0.00019968;AFR_AF=0.9992,0.0008;AMR_AF=1,0;AN=5008;CS=DUP_gs;EAS_AF=1,0;END=144892802;EUR_AF=1,0;NS=2504;SAS_AF=1,0;SITEPOST=1;SVTYPE=CNV\tGT\t1|1\n1\t144913699\tDUP_gs_CNV_1_144913699_144951391\tC\t<CN2>,<CN3>\t.\tPASS\tAC=4995,13;AF=0.997404,0.00259585;AFR_AF=0.9992,0.0008;AMR_AF=0.9971,0.0029;AN=5008;CS=DUP_gs;EAS_AF=1,0;END=144951391;EUR_AF=0.992,0.008;NS=2504;SAS_AF=0.998,0.002;SITEPOST=1;SVTYPE=CNV\tGT\t1|1\n1\t144973077\tDUP_gs_CNV_1_144973077_144989257\tT\t<CN2>\t.\tPASS\tAC=4992;AF=0.996805;AFR_AF=0.9955;AMR_AF=0.9957;AN=5008;CS=DUP_gs;EAS_AF=0.996;END=144989257;EUR_AF=1;NS=2504;SAS_AF=0.9969;SITEPOST=1;SVTYPE=DUP\tGT\t1|1\n1\t145120320\tDUP_gs_CNV_1_145120320_145182150\tT\t<CN2>,<CN3>\t.\tPASS\tAC=4990,8;AF=0.996406,0.00159744;AFR_AF=0.9977,0;AMR_AF=0.9942,0;AN=5008;CS=DUP_gs;EAS_AF=0.9911,0.0069;END=145182150;EUR_AF=0.999,0.001;NS=2504;SAS_AF=0.999,0;SITEPOST=1;SVTYPE=CNV\tGT\t1|1\n1\t146081807\tDUP_uwash_chr1_146081807_146164363\tG\t<CN2>,<CN3>\t.\tPASS\tAC=5005,1;AF=0.999401,0.00019968;AFR_AF=0.9985,0.0008;AMR_AF=1,0;AN=5008;CS=DUP_uwash;EAS_AF=0.999,0;END=146164363;EUR_AF=1,0;NS=2504;SAS_AF=1,0;SITEPOST=1;SVTYPE=CNV\tGT\t1|1\n1\t148832244\tDUP_gs_CNV_1_148832244_148954132\tT\t<CN2>,<CN3>,<CN4>\t.\tPASS\tAC=402,4530,27;AF=0.0802716,0.904553,0.00539137;AFR_AF=0.0431,0.9463,0.0061;AMR_AF=0.0908,0.889,0.0101;AN=5008;CS=DUP_gs;EAS_AF=0.1081,0.874,0.005;END=148954132;EUR_AF=0.0865,0.9026,0;NS=2504;SAS_AF=0.0879,0.8926,0.0072;SITEPOST=0.9999;SVTYPE=CNV\tGT\t2|2\n1\t149015523\tDUP_gs_CNV_1_149015523_149036627\tA\t<CN0>,<CN2>,<CN3>\t.\tPASS\tAC=5,4413,51;AF=0.0009984,0.88119,0.0101837;AFR_AF=0.0008,0.9319,0.0113;AMR_AF=0,0.8818,0.013;AN=5008;CS=DUP_gs;EAS_AF=0,0.8413,0.0119;END=149036627;EUR_AF=0,0.8877,0.003;NS=2504;SAS_AF=0.0041,0.8466,0.0123;SITEPOST=0.9985;SVTYPE=CNV\tGT\t2|2\n1\t149218121\tALU_umary_ALU_506\tT\t<INS:ME:ALU>\t.\t.\tAC=524;AF=0.104633;AFR_AF=0.115;AMR_AF=0.0778;AN=5008;CS=ALU_umary;EAS_AF=0.0823;EUR_AF=0.1233;MEINFO=AluUndef,1,276,-;NS=2504;SAS_AF=0.1135;SITEPOST=1;SVLEN=275;SVTYPE=ALU;TSD=null\tGT\t0|1\n1\t149231192\tDUP_gs_CNV_1_149231192_149241216\tC\t<CN2>,<CN3>\t.\tPASS\tAC=4383,41;AF=0.8752,0.0081869;AFR_AF=0.9289,0.0076;AMR_AF=0.8617,0.0144;AN=5008;CS=DUP_gs;EAS_AF=0.8552,0.0099;END=149241216;EUR_AF=0.8728,0.004;NS=2504;SAS_AF=0.8354,0.0072;SITEPOST=0.9983;SVTYPE=CNV\tGT\t1|1\n1\t149249429\tDUP_gs_CNV_1_149249429_149284877\tC\t<CN0>,<CN2>,<CN3>\t.\tPASS\tAC=11,4449,54;AF=0.00219649,0.888379,0.0107828;AFR_AF=0,0.9395,0.0106;AMR_AF=0,0.8718,0.0187;AN=5008;CS=DUP_gs;EAS_AF=0,0.8611,0.0119;END=149284877;EUR_AF=0.004,0.8966,0.007;NS=2504;SAS_AF=0.0072,0.8507,0.0082;SITEPOST=0.9998;SVTYPE=CNV\tGT\t2|2\n1\t149289438\tDUP_gs_CNV_1_149289438_149358445\tC\t<CN2>,<CN3>\t.\tPASS\tAC=4425,64;AF=0.883586,0.0127795;AFR_AF=0.9349,0.0151;AMR_AF=0.8703,0.0187;AN=5008;CS=DUP_gs;EAS_AF=0.8581,0.0129;END=149358445;EUR_AF=0.8897,0.0089;NS=2504;SAS_AF=0.8436,0.0092;SITEPOST=0.9999;SVTYPE=CNV\tGT\t1|1\n1\t149532289\tBI_GS_CNV_1_149532289_149572952\tT\t<CN0>\t100\tPASS\tAC=4559;AF=0.910343;AFR_AF=0.8949;AMR_AF=0.9063;AN=5008;CIEND=0,500;CIPOS=-500,0;CS=DEL_union;EAS_AF=0.8125;END=149572952;EUR_AF=0.992;NS=2504;SAS_AF=0.9509;SVTYPE=DEL\tGT\t1|1\n1\t150037842\tDEL_pindel_1394\tTCAAAATGTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCG\tT\t.\tPASS\tAC=3842;AF=0.767173;AFR_AF=0.528;AMR_AF=0.8343;AN=5008;CS=DEL_pindel;EAS_AF=0.8542;END=150037898;EUR_AF=0.8569;MEINFO=AluYc,259,282,-;NS=2504;SAS_AF=0.8609;SITEPOST=0.9859;SVTYPE=DEL_ALU\tGT\t1|1\n1\t152760084\tUW_VH_24538\tC\t<CN0>\t100\tPASS\tAC=982;AF=0.196086;AFR_AF=0.2035;AMR_AF=0.2291;AN=5008;CIEND=0,119;CIPOS=-369,0;CS=DEL_union;EAS_AF=0.0347;END=152770547;EUR_AF=0.3569;MC=YL_CN_ITU_231,BI_GS_CNV_1_152760314_152770867,EM_DL_DEL05999;NS=2504;SAS_AF=0.1636;SVTYPE=DEL\tGT\t1|0\n1\t153133703\tBI_GS_DEL1_B5_P0154_145\tA\t<CN0>\t100\tPASS\tAC=2213;AF=0.441893;AFR_AF=0.2655;AMR_AF=0.4337;AN=5008;CIEND=0,1;CIPOS=0,1;CS=DEL_union;EAS_AF=0.5149;END=153133960;EUR_AF=0.5507;MC=UW_VH_115;NS=2504;SAS_AF=0.499;SVTYPE=DEL\tGT\t1|0\n1\t153252216\tL1_umary_LINE1_137\tC\t<INS:ME:LINE1>\t.\t.\tAC=50;AF=0.00998403;AFR_AF=0.0098;AMR_AF=0.0072;AN=5008;CS=L1_umary;EAS_AF=0.005;EUR_AF=0.003;MEINFO=LINE1,4827,5620,+;NS=2504;SAS_AF=0.0245;SITEPOST=1;SVLEN=793;SVTYPE=LINE1;TSD=TGTCA\tGT\t0|1\n1\t157540655\tBI_GS_DEL1_B4_P0158_141\tG\t<CN0>\t100\tPASS\tAC=1984;AF=0.396166;AFR_AF=0.0862;AMR_AF=0.5245;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.6101;END=157540871;EUR_AF=0.3956;MC=UW_VH_2001;NS=2504;SAS_AF=0.5041;SVTYPE=DEL\tGT\t1|0\n1\t157887236\tINV_delly_INV00007359\tT\t<INV>\t.\tPASS\tAC=1276;AF=0.254792;AFR_AF=0.2073;AMR_AF=0.2017;AN=5008;CIEND=-17,17;CIPOS=-17,17;CS=INV_delly;EAS_AF=0.2669;END=157887845;EUR_AF=0.3111;IMPRECISE;NS=2504;SAS_AF=0.2863;SITEPOST=1;SVTYPE=INV\tGT\t1|0\n1\t158489615\tBI_GS_DEL1_B1_P0159_428\tG\t<CN0>\t100\tPASS\tAC=14;AF=0.00279553;AFR_AF=0;AMR_AF=0.0043;AN=5008;CIEND=-1,1;CIPOS=-1,1;CS=DEL_union;EAS_AF=0;END=158491973;EUR_AF=0.0099;MC=UW_VH_116;NS=2504;SAS_AF=0.001;SVTYPE=DEL\tGT\t1|0\n1\t158867540\tBI_GS_DEL1_B1_P0159_764\tA\t<CN0>\t100\tPASS\tAC=3912;AF=0.78115;AFR_AF=0.6997;AMR_AF=0.8429;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.9623;END=158869980;EUR_AF=0.7366;MC=SI_BD_841,YL_CN_FIN_239,YL_CN_JPT_249,EM_DL_DEL06158,YL_CN_GWD_297,UW_VH_2002;NS=2504;SAS_AF=0.7065;SVTYPE=DEL\tGT\t0|1\n1\t158961353\tBI_GS_DEL1_B1_P0159_834\tC\t<CN0>\t100\tPASS\tAC=485;AF=0.0968451;AFR_AF=0.1589;AMR_AF=0.1095;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0;END=158966208;EUR_AF=0.1332;MC=EM_DL_DEL06162,UW_VH_15295,UW_VH_2003,SI_BD_842,YL_CN_ITU_240;NS=2504;SAS_AF=0.0665;SVTYPE=DEL\tGT\t1|0\n1\t159648708\tBI_GS_DEL1_B2_P0160_484\tT\t<CN0>\t100\tPASS\tAC=3464;AF=0.691693;AFR_AF=0.5628;AMR_AF=0.8372;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.8244;END=159649659;EUR_AF=0.7336;MC=UW_VH_118,SI_BD_845,EM_DL_DEL1055034;NS=2504;SAS_AF=0.5828;SVTYPE=DEL\tGT\t1|1\n1\t162052665\tDEL_pindel_1498\tTGTGTCCTTTTTTTCTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCCCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC\tT\t.\tPASS\tAC=3734;AF=0.745607;AFR_AF=0.6952;AMR_AF=0.7853;AN=5008;CS=DEL_pindel;EAS_AF=0.744;END=162052985;EUR_AF=0.7813;MEINFO=AluYa5,1,281,-;NS=2504;SAS_AF=0.7505;SITEPOST=0.9614;SVTYPE=DEL_ALU\tGT\t1|0\n1\t162761322\tALU_umary_ALU_549\tT\t<INS:ME:ALU>\t.\t.\tAC=3354;AF=0.669728;AFR_AF=0.4894;AMR_AF=0.6844;AN=5008;CS=ALU_umary;EAS_AF=0.753;EUR_AF=0.7485;MEINFO=AluYa5b1,3,281,-;NS=2504;SAS_AF=0.7362;SITEPOST=0.9968;SVLEN=278;SVTYPE=ALU;TSD=CATTTGGCATTTTT\tGT\t1|1\n1\t163314443\tALU_umary_ALU_556\tG\t<INS:ME:ALU>\t.\t.\tAC=1661;AF=0.331669;AFR_AF=0.2466;AMR_AF=0.3141;AN=5008;CS=ALU_umary;EAS_AF=0.2857;EUR_AF=0.3539;MEINFO=AluYa4_4,1,281,+;NS=2504;SAS_AF=0.4836;SITEPOST=1;SVLEN=280;SVTYPE=ALU;TSD=AGAAGTGGGTAG\tGT\t1|1\n1\t165659306\tALU_umary_ALU_568\tA\t<INS:ME:ALU>\t.\t.\tAC=2154;AF=0.430112;AFR_AF=0.3941;AMR_AF=0.4107;AN=5008;CS=ALU_umary;EAS_AF=0.5218;EUR_AF=0.3698;MEINFO=AluUndef,18,281,+;NS=2504;SAS_AF=0.4601;SITEPOST=1;SVLEN=263;SVTYPE=ALU;TSD=AA\tGT\t1|1\n1\t165731209\tDEL_pindel_1530\tAAACATTTTTATTAAAATGTTATAAGGATAACATTTTTATTAAAATGTTATAAGGATAACATTTTTATTAAAATGTTATAAGGATAACATTTTTATTAAAATGTTATAAGGATAACATTTTTATTAAAATGTTATAAGGATAACATTTTTATTAAAATGTTATAAGGATAACATTTTTATTAAAATGTTATAAGGATAACATTTTTATTAAAATGTTATAAGGATAACATTTTTATTAAAATGTTATAAGGATAACATTTTTATTAAAATGTTATAAGGAT\tA\t.\tPASS\tAC=2776;AF=0.554313;AFR_AF=0.5567;AMR_AF=0.5418;AN=5008;CS=DEL_pindel;EAS_AF=0.5764;END=165731489;EUR_AF=0.5318;NS=2504;SAS_AF=0.5603;SITEPOST=0.9876;SVTYPE=DEL\tGT\t0|1\n1\t169225213\tBI_GS_CNV_1_169225213_169245324\tT\t<CN0>\t100\tPASS\tAC=1016;AF=0.202875;AFR_AF=0.1067;AMR_AF=0.2104;AN=5008;CIEND=0,500;CIPOS=-500,0;CS=DEL_union;EAS_AF=0.1369;END=169245324;EUR_AF=0.3837;MC=YL_CN_GBR_260;NS=2504;SAS_AF=0.2096;SVTYPE=DEL\tGT\t1|0\n1\t170964063\tALU_umary_ALU_589\tC\t<INS:ME:ALU>\t.\t.\tAC=220;AF=0.0439297;AFR_AF=0.0166;AMR_AF=0.0764;AN=5008;CS=ALU_umary;EAS_AF=0;EUR_AF=0.1024;MEINFO=AluYb8,1,277,-;NS=2504;SAS_AF=0.0429;SITEPOST=1;SVLEN=276;SVTYPE=ALU;TSD=AAGATTATAGCCCAGACC\tGT\t0|1\n1\t171358314\tALU_umary_ALU_592\tT\t<INS:ME:ALU>\t.\t.\tAC=396;AF=0.0790735;AFR_AF=0.0197;AMR_AF=0.0677;AN=5008;CS=ALU_umary;EAS_AF=0.0069;EUR_AF=0.1024;MEINFO=AluUndef,1,277,-;NS=2504;SAS_AF=0.2178;SITEPOST=1;SVLEN=276;SVTYPE=ALU;TSD=CAAAAGTTTTACTCTTT\tGT\t1|0\n1\t171783587\tDEL_pindel_1552\tACTCCAGCCTGGGCGACAGAGTGGGACTCCATCTAAAAAAAAAAAAAAAAAAAGGGGCTGATG\tA\t.\tPASS\tAC=2052;AF=0.409744;AFR_AF=0.3048;AMR_AF=0.3977;AN=5008;CS=DEL_pindel;EAS_AF=0.6647;END=171783649;EUR_AF=0.4245;NS=2504;SAS_AF=0.2822;SITEPOST=0.9998;SVTYPE=DEL\tGT\t0|1\n1\t174333015\tALU_umary_ALU_602\tT\t<INS:ME:ALU>\t.\t.\tAC=531;AF=0.10603;AFR_AF=0.0635;AMR_AF=0.1729;AN=5008;CS=ALU_umary;EAS_AF=0.0397;EUR_AF=0.1571;MEINFO=AluYb7_3,1,263,-;NS=2504;SAS_AF=0.1319;SITEPOST=1;SVLEN=262;SVTYPE=ALU;TSD=TGTCAAACCATTCTT\tGT\t1|0\n1\t175071066\tDUP_gs_CNV_1_175071066_175077094\tT\t<CN0>,<CN2>,<CN3>,<CN4>,<CN5>,<CN6>\t.\tPASS\tAC=903,12,29,2,1,13;AF=0.180312,0.00239617,0.00579073,0.00039936,0.00019968,0.00259585;AFR_AF=0.0696,0.0053,0.0182,0.0008,0.0008,0.0076;AMR_AF=0.1686,0.0014,0.0072,0.0014,0,0.0043;AN=5008;CS=DUP_gs;EAS_AF=0.3472,0,0,0,0,0;END=175077094;EUR_AF=0.1292,0,0,0,0,0;NS=2504;SAS_AF=0.2188,0.0041,0,0,0,0;SITEPOST=1;SVTYPE=CNV\tGT\t1|0\n1\t178495321\tBI_GS_DEL1_B5_P0179_545\tA\t<CN0>\t100\tPASS\tAC=1760;AF=0.351438;AFR_AF=0.3086;AMR_AF=0.2983;AN=5008;CIEND=-24,24;CIPOS=-24,24;CS=DEL_union;EAS_AF=0.4177;END=178495683;EUR_AF=0.3579;NS=2504;SAS_AF=0.3722;SVTYPE=DEL\tGT\t1|0\n1\t178948185\tALU_umary_ALU_622\tT\t<INS:ME:ALU>\t.\t.\tAC=1094;AF=0.21845;AFR_AF=0.0522;AMR_AF=0.2435;AN=5008;CS=ALU_umary;EAS_AF=0.2798;EUR_AF=0.3012;MEINFO=AluUndef,1,281,+;NS=2504;SAS_AF=0.2771;SITEPOST=1;SVLEN=280;SVTYPE=ALU;TSD=AAAGAAAATCGCTT\tGT\t0|1\n1\t179491966\tALU_umary_ALU_623\tT\t<INS:ME:ALU>\t.\t.\tAC=1036;AF=0.206869;AFR_AF=0.084;AMR_AF=0.2161;AN=5008;CS=ALU_umary;EAS_AF=0.253;EUR_AF=0.2634;MEINFO=AluYb11,12,281,-;NS=2504;SAS_AF=0.2607;SITEPOST=1;SVLEN=269;SVTYPE=ALU;TSD=ATATCCTAATT\tGT\t0|1\n1\t180183831\tDEL_pindel_1660\tATATTGTGTAATCTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGCGACCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCCGGGACCACAGGCGCCCGCCACCACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGGCGGGGTTTCACCGCGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCGCCCGCCTCTGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC\tA\t.\tPASS\tAC=4032;AF=0.805112;AFR_AF=0.7194;AMR_AF=0.8487;AN=5008;CS=DEL_pindel;EAS_AF=0.8542;END=180184150;EUR_AF=0.837;MEINFO=AluYh7,1,281,-;NS=2504;SAS_AF=0.8067;SITEPOST=0.9788;SVTYPE=DEL_ALU\tGT\t1|1\n1\t180292989\tDEL_pindel_1667\tTTACTCTATGTCTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCCGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC\tT\t.\tPASS\tAC=3502;AF=0.699281;AFR_AF=0.7065;AMR_AF=0.7118;AN=5008;CS=DEL_pindel;EAS_AF=0.7034;END=180293313;EUR_AF=0.6849;MEINFO=AluYb6_2,1,281,-;NS=2504;SAS_AF=0.6912;SITEPOST=0.95845;SVTYPE=DEL_ALU\tGT\t1|0\n1\t180857564\tALU_umary_ALU_629\tC\t<INS:ME:ALU>\t.\t.\tAC=1216;AF=0.242812;AFR_AF=0.2118;AMR_AF=0.268;AN=5008;CS=ALU_umary;EAS_AF=0.1419;EUR_AF=0.3231;MEINFO=AluUndef,3,281,+;NS=2504;SAS_AF=0.2883;SITEPOST=1;SVLEN=278;SVTYPE=ALU;TSD=TAAAATTGAGATAGC\tGT\t1|1\n1\t187464747\tYL_CN_PUR_321\tT\t<CN0>\t100\tPASS\tAC=4280;AF=0.854633;AFR_AF=0.7693;AMR_AF=0.866;AN=5008;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0.9772;END=187466829;EUR_AF=0.7575;MC=EM_DL_DEL1065840,YL_CN_JPT_273,YL_CN_MSL_211,YL_CN_CEU_323;NS=2504;SAS_AF=0.9356;SVTYPE=DEL\tGT\t1|0\n1\t187716053\tBI_GS_DEL1_B5_P0188_771\tG\t<CN0>\t100\tPASS\tAC=1019;AF=0.203474;AFR_AF=0.0514;AMR_AF=0.2882;AN=5008;CIEND=-7,7;CIPOS=-7,7;CS=DEL_union;EAS_AF=0.0099;END=187722514;EUR_AF=0.4682;MC=SI_BD_972,UW_VH_19561,EM_DL_DEL06972,YL_CN_STU_257,UW_VH_130;NS=2504;SAS_AF=0.2761;SVTYPE=DEL\tGT\t1|1\n1\t188186464\tALU_umary_ALU_660\tT\t<INS:ME:ALU>\t.\t.\tAC=474;AF=0.0946486;AFR_AF=0.0794;AMR_AF=0.1009;AN=5008;CS=ALU_umary;EAS_AF=0.0397;EUR_AF=0.1292;MEINFO=AluUndef,1,268,-;NS=2504;SAS_AF=0.1319;SITEPOST=1;SVLEN=267;SVTYPE=ALU;TSD=CCCGGGTAAGTTAAACATTTTTT\tGT\t1|0\n1\t188539457\tUW_VH_131\tT\t<CN0>\t100\tPASS\tAC=4730;AF=0.944489;AFR_AF=0.8858;AMR_AF=0.9669;AN=5008;CIEND=0,498;CIPOS=-452,0;CS=DEL_union;EAS_AF=1;END=188540228;EUR_AF=0.9264;MC=BI_GS_DEL1_B1_P0189_370,SI_BD_977;NS=2504;SAS_AF=0.9693;SVTYPE=DEL\tGT\t1|1\n1\t188994948\tDEL_pindel_1724\tTCAATTCTATTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCCGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCTTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGC\tT\t.\tPASS\tAC=2253;AF=0.44988;AFR_AF=0.4992;AMR_AF=0.4683;AN=5008;CS=DEL_pindel;EAS_AF=0.4048;END=188995283;EUR_AF=0.4493;MEINFO=AluYb6_2,2,281,-;NS=2504;SAS_AF=0.4172;SITEPOST=0.9945;SVTYPE=DEL_ALU\tGT\t1|0\n1\t189247039\tALU_umary_ALU_672\tA\t<INS:ME:ALU>\t.\t.\tAC=1634;AF=0.326278;AFR_AF=0.152;AMR_AF=0.3991;AN=5008;CS=ALU_umary;EAS_AF=0.3849;EUR_AF=0.4185;MEINFO=AluUndef,1,281,+;NS=2504;SAS_AF=0.3548;SITEPOST=1;SVLEN=280;SVTYPE=ALU;TSD=AAAAAATATTCA\tGT\t0|1\n1\t190837319\tDEL_pindel_1759\tCATTAGATCTCGAGAATTTATTCATCTCGTATAACTAAGACTTTGTGCCCTTTGATCAAATCTCTCCATTTCCTCCAGCCCCCTATATTGTGGTAACCCCTATTCTACTCTCTGCATGTTTAGATTTCACATATAAGTTAGATCATGCACTATTTGTGTCTGTGTCTGGCTT\tC\t.\tPASS\tAC=3772;AF=0.753195;AFR_AF=0.4818;AMR_AF=0.8026;AN=5008;CS=DEL_pindel;EAS_AF=0.9206;END=190837490;EUR_AF=0.834;NS=2504;SAS_AF=0.8292;SITEPOST=0.9995;SVTYPE=DEL\tGT\t1|1\n1\t190874469\tALU_umary_ALU_686\tT\t<INS:ME:ALU>\t.\t.\tAC=1189;AF=0.23742;AFR_AF=0.1422;AMR_AF=0.232;AN=5008;CS=ALU_umary;EAS_AF=0.2103;EUR_AF=0.3052;MEINFO=AluYa4_5,1,281,-;NS=2504;SAS_AF=0.3282;SITEPOST=1;SVLEN=280;SVTYPE=ALU;TSD=GGGCTGAAAACTCTTTATATTTGTGTTT\tGT\t0|1\n1\t192609798\tDEL_pindel_1784\tGTCCTCCTCACTTATAGTAGAGACTTACATAGAAAATGAAGTTGATCAGACCACATTTCTCATATGT\tG\t.\tPASS\tAC=1871;AF=0.373602;AFR_AF=0.3548;AMR_AF=0.4265;AN=5008;CS=DEL_pindel;EAS_AF=0.2024;END=192609864;EUR_AF=0.4324;NS=2504;SAS_AF=0.4775;SITEPOST=0.9999;SVTYPE=DEL\tGT\t1|1\n1\t194451056\tUW_VH_1353\tA\t<CN0>\t100\tPASS\tAC=2727;AF=0.544529;AFR_AF=0.4818;AMR_AF=0.5504;AN=5008;CIEND=0,324;CIPOS=-237,0;CS=DEL_union;EAS_AF=0.6895;END=194454312;EUR_AF=0.6481;MC=YL_CN_CHB_287,YL_CN_IBS_211,BI_GS_DEL1_B3_P0195_22,EM_DL_DEL07125,SI_BD_1025;NS=2504;SAS_AF=0.3691;SVTYPE=DEL\tGT\t0|1\n1\t194517604\tBI_GS_DEL1_B2_P0195_316\tA\t<CN0>\t100\tPASS\tAC=2571;AF=0.513379;AFR_AF=0.1679;AMR_AF=0.549;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.7083;END=194517863;EUR_AF=0.7157;NS=2504;SAS_AF=0.546;SVTYPE=DEL\tGT\t1|1\n1\t194675140\tALU_umary_ALU_708\tC\t<INS:ME:ALU>\t.\t.\tAC=824;AF=0.164537;AFR_AF=0.0461;AMR_AF=0.1686;AN=5008;CS=ALU_umary;EAS_AF=0.2966;EUR_AF=0.165;MEINFO=AluUndef,13,281,+;NS=2504;SAS_AF=0.1851;SITEPOST=1;SVLEN=268;SVTYPE=ALU;TSD=AAAATTGAGTATATC\tGT\t1|1\n1\t197894025\tBI_GS_DEL1_B5_P0198_990\tC\t<CN0>\t100\tPASS\tAC=2799;AF=0.558906;AFR_AF=0.5272;AMR_AF=0.6124;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.6944;END=197894310;EUR_AF=0.4006;MC=UW_VH_1354;NS=2504;SAS_AF=0.5869;SVTYPE=DEL\tGT\t1|0\n1\t198003599\tUW_VH_4856\tT\t<CN0>\t100\tPASS\tAC=31;AF=0.0061901;AFR_AF=0.0008;AMR_AF=0.0159;AN=5008;CIEND=0,287;CIPOS=-308,0;CS=DEL_union;EAS_AF=0;END=198007023;EUR_AF=0.0139;MC=YL_CN_PUR_335,BI_GS_DEL1_B4_P0199_1;NS=2504;SAS_AF=0.0051;SVTYPE=DEL\tGT\t0|1\n1\t199110049\tBI_GS_DEL1_B2_P0200_70\tC\t<CN0>\t100\tPASS\tAC=968;AF=0.193291;AFR_AF=0.4781;AMR_AF=0.1182;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.003;END=199113807;EUR_AF=0.165;MC=YL_CN_TSI_238,EM_DL_DEL07291,UW_VH_23366,UW_VH_2348,UW_VH_17931,SI_BD_1055;NS=2504;SAS_AF=0.0869;SVTYPE=DEL\tGT\t1|0\n1\t205178526\tINV_delly_INV00008409\tT\t<INV>\t.\tPASS\tAC=1615;AF=0.322484;AFR_AF=0.084;AMR_AF=0.4049;AN=5008;CIEND=-184,184;CIPOS=-184,184;CS=INV_delly;EAS_AF=0.4464;END=205178807;EUR_AF=0.4304;IMPRECISE;MC=CINV_delly_INV00008407;NS=2504;SAS_AF=0.3476;SITEPOST=0.99985;SVTYPE=INV\tGT\t0|1\n1\t207292375\tBI_GS_DEL1_B5_P0208_416\tA\t<CN0>\t100\tPASS\tAC=2995;AF=0.598043;AFR_AF=0.3396;AMR_AF=0.6326;AN=5008;CIEND=-8,8;CIPOS=-8,8;CS=DEL_union;EAS_AF=0.7351;END=207292595;EUR_AF=0.6282;NS=2504;SAS_AF=0.7505;SVTYPE=DEL\tGT\t1|1\n1\t207292405\tBI_GS_DEL1_B1_P0208_321\tA\t<CN0>\t100\tPASS\tAC=2996;AF=0.598243;AFR_AF=0.3351;AMR_AF=0.6326;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.7361;END=207293149;EUR_AF=0.6332;MC=EM_DL_DEL1073798,SI_BD_1108;NS=2504;SAS_AF=0.7515;SVTYPE=DEL\tGT\t1|1\n1\t207542027\tDUP_gs_CNV_1_207542027_207545525\tA\t<CN0>,<CN2>\t.\tPASS\tAC=2263,3;AF=0.451877,0.00059904;AFR_AF=0.3759,0.0008;AMR_AF=0.4582,0;AN=5008;CS=DUP_gs;EAS_AF=0.4177,0.001;END=207545525;EUR_AF=0.506,0.001;MC=UW_VH_3,UW_VH_18858,YL_CN_IBS_221,BI_GS_DEL1_B1_P0208_567,SI_BD_1109,UW_VH_25170,EM_DL_DEL07614;NS=2504;SAS_AF=0.5297,0;SITEPOST=1;SVTYPE=CNV\tGT\t1|1\n1\t209935335\tDEL_pindel_1918\tAGCAGGAGAAGCCTGTGTGGCTCTGAAAGCTTGAGTGGGCTACTTTGGTTTTGTGGATCTGAAACATTGTCTTCGTCCTGTAATGAATTACCACAGACTGGGTGGCTTAAATAACAGAAATTTATTTCTTACAATTCTGGAGTCTGGAGTTCTAAACCCATGGATTCTGCAGATCTGGTGTCTGATGAGAGCACTCTTCCCACTATGCAGATGGCCTTCTTCTCATTGTGTCCTCACAAGGCAGAGAGCAGAGAGAGAAAGCAAGCTCTCTCGTGTCTCTTCTAATAATGGCACTAATCCCATTCATGAGGGCTACCTGCTCTGACCTAATTATTTCTCAAAGTCTCCACCTCCTAATACTATCACATTGGGAGATAGGATTTCAACACACAGATTTGGGCGGGGGGACAATAAACACTCAGTCCATAACAAACATGATGGTTAGTTCTTCCTTCCGAAATCATCAGGAGAGTCTTTCAAGAGGCTCCAGGCAGTGGTTTTCAGCATTCCCCACTTGCCTTCCAGGTGACAGGCACCAGCTCTGAAGTCTTTCCAGCCCAGCATCCTCCTCCCTCAGGCATCTGCAGGGATCTGTCTGACCACCTCTCCTCACAGGCTGGGGGCCTTCCTCCACAGGACACTCCCATCAAGAAGCCACCCAAACACCACCGTGGTAAGAGCAGAGCCTCCCTCACTCCACAGGGCCTGCAGAGAATCCTGAGACAACTGTCCCAGCTCACTG\tA\t.\tPASS\tAC=1132;AF=0.226038;AFR_AF=0.413;AMR_AF=0.1873;AN=5008;CS=DEL_pindel;EAS_AF=0.1399;END=209936076;EUR_AF=0.1511;NS=2504;SAS_AF=0.1667;SITEPOST=0.9999;SVTYPE=DEL\tGT\t0|1\n1\t210078053\tUW_VH_24770\tG\t<CN0>\t100\tPASS\tAC=2656;AF=0.530351;AFR_AF=0.5915;AMR_AF=0.4697;AN=5008;CIEND=0,481;CIPOS=-422,0;CS=DEL_union;EAS_AF=0.4524;END=210085978;EUR_AF=0.5716;MC=YL_CN_IBS_222,UW_VH_24934,UW_VH_133,UW_VH_5809,EM_DL_DEL07696,UW_VH_23334,BI_GS_DEL1_B2_P0211_64,UW_VH_20901,UW_VH_4681;NS=2504;SAS_AF=0.5286;SVTYPE=DEL\tGT\t1|1\n1\t211965009\tBI_GS_DEL1_B2_P0212_692\tA\t<CN0>\t100\tPASS\tAC=52;AF=0.0103834;AFR_AF=0.0015;AMR_AF=0.0202;AN=5008;CIEND=0,1;CIPOS=0,1;CS=DEL_union;EAS_AF=0;END=211965782;EUR_AF=0.0288;MC=UW_VH_4415,SI_BD_1132;NS=2504;SAS_AF=0.0072;SVTYPE=DEL\tGT\t1|0\n1\t212471179\tUW_VH_12590\tT\t<CN0>\t100\tPASS\tAC=3518;AF=0.702476;AFR_AF=0.9448;AMR_AF=0.6556;AN=5008;CIEND=0,444;CIPOS=-471,0;CS=DEL_union;EAS_AF=0.5298;END=212472619;EUR_AF=0.6441;MC=UW_VH_13671,UW_VH_1685;NS=2504;SAS_AF=0.6462;SVTYPE=DEL\tGT\t1|0\n1\t213002037\tYL_CN_FIN_274\tA\t<CN0>\t100\tPASS\tAC=100;AF=0.019968;AFR_AF=0.0008;AMR_AF=0.0187;AN=5008;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0.0119;END=213013756;EUR_AF=0.0368;MC=EM_DL_DEL07763,BI_GS_DEL1_B3_P0214_1,UW_VH_2155,YL_CN_STU_278;NS=2504;SAS_AF=0.0378;SVTYPE=DEL\tGT\t1|0\n1\t213083966\tYL_CN_PEL_289\tA\t<CN0>\t100\tPASS\tAC=3551;AF=0.709065;AFR_AF=0.3192;AMR_AF=0.8559;AN=5008;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0.9087;END=213086597;EUR_AF=0.7813;MC=YL_CN_IBS_225,YL_CN_GWD_390,YL_CN_CEU_354,YL_CN_ASW_298,UW_VH_135,YL_CN_GIH_210,YL_CN_CHS_296,YL_CN_CLM_230,YL_CN_PJL_325,YL_CN_BEB_233,YL_CN_STU_279,BI_GS_DEL1_B1_P0214_59,YL_CN_PUR_354,SI_BD_1136;NS=2504;SAS_AF=0.8517;SVTYPE=DEL\tGT\t1|0\n1\t217024868\tALU_umary_ALU_789\tG\t<INS:ME:ALU>\t.\t.\tAC=120;AF=0.0239617;AFR_AF=0.0045;AMR_AF=0.0346;AN=5008;CS=ALU_umary;EAS_AF=0;EUR_AF=0.0755;MEINFO=AluYa3_5,1,263,+;NS=2504;SAS_AF=0.0143;SITEPOST=1;SVLEN=262;SVTYPE=ALU;TSD=AAAAAGAGGCCAGAG\tGT\t0|1\n1\t217457929\tBI_GS_DEL1_B3_P0218_21\tC\t<CN0>\t100\tPASS\tAC=1002;AF=0.20008;AFR_AF=0.2685;AMR_AF=0.2536;AN=5008;CIEND=-7,8;CIPOS=-7,8;CS=DEL_union;EAS_AF=0.0942;END=217458372;EUR_AF=0.1074;MC=DEL_pindel_2011,UW_VH_1355;NS=2504;SAS_AF=0.274;SVTYPE=DEL\tGT\t0|1\n1\t217754074\tDEL_pindel_2024\tTAGAAAGGCAGAATCTCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGCGGTGGCGGGCGCCTGTAGTCCCAGCTACTGGGGAGGCTGAGGCAGGAGAATGGCGTTGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAA\tT\t.\tPASS\tAC=2279;AF=0.455072;AFR_AF=0.379;AMR_AF=0.4553;AN=5008;CS=DEL_pindel;EAS_AF=0.6399;END=217754377;EUR_AF=0.4364;MEINFO=AluYb6_2,20,281,+;NS=2504;SAS_AF=0.3865;SITEPOST=0.9948;SVTYPE=DEL_ALU\tGT\t1|0\n1\t217913513\tALU_umary_ALU_795\tT\t<INS:ME:ALU>\t.\t.\tAC=977;AF=0.195088;AFR_AF=0.0174;AMR_AF=0.1916;AN=5008;CS=ALU_umary;EAS_AF=0.4067;EUR_AF=0.1431;MEINFO=AluUndef,5,278,-;NS=2504;SAS_AF=0.273;SITEPOST=1;SVLEN=273;SVTYPE=ALU;TSD=GGCCTTTCTTCTT\tGT\t1|0\n1\t218245628\tDEL_pindel_2030\tTAAAAAAAGAACAAACAACCCCATCAAAAAGTGGGCGAAGGACATGAACAGACACTTCTCAAAAGAAGACATTTATGCAGCCAAAAAGACATGAAGAAATGCTCATCATCACTGGCCATCAGAGAAATGCAAATCAAAACCACTATGAGATATCATCTCACACCAGTTAGAATGGCAATCATTAAAAAGTCAGGAAACAACAGGTGCTGGAGAGGATGCGGAGAAATAGGAACACTTTTACACTGTTGGTGGGACTGTAAACTAGTTCAACCATTGTGGAAGTCAGTGTGGCGATTCCTCAGGGATCTAGAACTAGAAATACCATTTGACCCAGCCATCCCATTACTGGGTATATACCCAAATGAGTATAAATCATGCTGCTATAAAGACACATGCACACGTATGTTTATTGCGGCACTATTCACAATAGCAAAGACTTGGAACCAACCCAAATGTCCAACAATGATAGACTGGATTAAGAAAATGTGGCACATATACACCATGGAATACTATGCAGCCATAAAAAATGATGAGTTCATATCCTTTGTAGGGACATGGATGAAATTGGAAACCATCATTCTCAGTAAACTATCGCAAGAACAAAAAACCAAACACCGCATATTCTCACTCATAGGTGGGAATTGAACAATGAGATCACATGGACACAGGAAGGGGAATATCACACTCTGGGGACTGTGGTGGGGTCGGGGGAGGGGGGAGGGATAGCATTGGGAGATATACCTAATGCTAGATGACACATTAGTGGGTGCAGCGCACCAGCATGGCACATGTATACATATGTAACTAACCTGCACAATGTGCACATGTACCCTAAAACTTAGAGTATAATAAAAAAAAAAAA\tT\t.\tPASS\tAC=983;AF=0.196286;AFR_AF=0.0522;AMR_AF=0.3401;AN=5008;CS=DEL_pindel;EAS_AF=0.119;END=218246489;EUR_AF=0.3529;MEINFO=LINE1,5537,5600,+;NS=2504;SAS_AF=0.2076;SITEPOST=0.9905;SVTYPE=DEL_LINE1\tGT\t1|0\n1\t219574692\tALU_umary_ALU_812\tT\t<INS:ME:ALU>\t.\t.\tAC=815;AF=0.16274;AFR_AF=0.0537;AMR_AF=0.2133;AN=5008;CS=ALU_umary;EAS_AF=0.2659;EUR_AF=0.1402;MEINFO=AluYa5,26,281,-;NS=2504;SAS_AF=0.1912;SITEPOST=1;SVLEN=255;SVTYPE=ALU;TSD=GCCTTTTCTTTTTTT\tGT\t0|1\n1\t222374169\tUW_VH_143\tT\t<CN0>\t100\tPASS\tAC=1259;AF=0.251398;AFR_AF=0.2375;AMR_AF=0.2738;AN=5008;CIEND=0,427;CIPOS=-562,0;CS=DEL_union;EAS_AF=0.1389;END=222380531;EUR_AF=0.3181;MC=EM_DL_DEL08275,BI_GS_DEL1_B4_P0223_95,BI_GS_DEL1_B2_P0223_307,YL_CN_BEB_239;NS=2504;SAS_AF=0.3016;SVTYPE=DEL\tGT\t1|0\n1\t225996433\tALU_umary_ALU_836\tT\t<INS:ME:ALU>\t.\t.\tAC=855;AF=0.170727;AFR_AF=0.0998;AMR_AF=0.2003;AN=5008;CS=ALU_umary;EAS_AF=0.1944;EUR_AF=0.2425;MEINFO=AluYa5,1,281,+;NS=2504;SAS_AF=0.1472;SITEPOST=1;SVLEN=280;SVTYPE=ALU;TSD=AAGAGTAACGAAT\tGT\t1|0\n1\t228024093\tDEL_pindel_2084\tTAATAAAAGCTTCCGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAATAA\tT\t.\tPASS\tAC=3572;AF=0.713259;AFR_AF=0.6982;AMR_AF=0.6888;AN=5008;CS=DEL_pindel;EAS_AF=0.627;END=228024405;EUR_AF=0.7535;MEINFO=AluYa5,1,281,+;NS=2504;SAS_AF=0.7986;SITEPOST=0.9718;SVTYPE=DEL_ALU\tGT\t1|0\n1\t228959933\tALU_umary_ALU_845\tT\t<INS:ME:ALU>\t.\t.\tAC=1324;AF=0.264377;AFR_AF=0.354;AMR_AF=0.2709;AN=5008;CS=ALU_umary;EAS_AF=0.2153;EUR_AF=0.2893;MEINFO=AluYa1_1,1,281,-;NS=2504;SAS_AF=0.1636;SITEPOST=1;SVLEN=280;SVTYPE=ALU;TSD=CTTTGTATAGTTTTT\tGT\t1|0\n1\t231085161\tALU_umary_ALU_854\tA\t<INS:ME:ALU>\t.\t.\tAC=1199;AF=0.239417;AFR_AF=0.239;AMR_AF=0.2507;AN=5008;CS=ALU_umary;EAS_AF=0.2282;EUR_AF=0.2505;MEINFO=AluUndef,1,277,-;NS=2504;SAS_AF=0.2321;SITEPOST=1;SVLEN=276;SVTYPE=ALU;TSD=AAAAAAAAAAA\tGT\t0|1\n1\t232458585\tBI_GS_DEL1_B1_P0233_442\tA\t<CN0>\t100\tPASS\tAC=1253;AF=0.2502;AFR_AF=0.1679;AMR_AF=0.2968;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.2024;END=232460249;EUR_AF=0.2853;MC=YL_CN_PEL_300,YL_CN_STU_293,UW_VH_10822,EM_DL_DEL1084800,UW_VH_13549,YL_CN_PJL_339,UW_VH_1356;NS=2504;SAS_AF=0.3415;SVTYPE=DEL\tGT\t0|1\n1\t232587774\tALU_umary_ALU_865\tT\t<INS:ME:ALU>\t.\t.\tAC=1529;AF=0.305312;AFR_AF=0.2655;AMR_AF=0.3545;AN=5008;CS=ALU_umary;EAS_AF=0.4415;EUR_AF=0.1909;MEINFO=AluUndef,6,281,+;NS=2504;SAS_AF=0.3016;SITEPOST=1;SVLEN=275;SVTYPE=ALU;TSD=AAAAATGTGGCATT\tGT\t1|1\n1\t232836575\tDEL_pindel_2145\tCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCATTTGAGTTCAGGAGTTTGAAATCAGCCTGACCAACATGGTGAAACTCTGTCTCTAGTAAAAATACAAAAATAAGCCGGGCGTGGTGGTGGGCATCTGTAATCCCAGCTACTCGGGAGGCTGAGGCAAGAGAATTGCTTG\tC\t.\tPASS\tAC=1812;AF=0.361821;AFR_AF=0.1573;AMR_AF=0.4035;AN=5008;CS=DEL_pindel;EAS_AF=0.4752;END=232836759;EUR_AF=0.3748;NS=2504;SAS_AF=0.4785;SITEPOST=0.9998;SVTYPE=DEL\tGT\t1|0\n1\t233962115\tSI_BD_1242\tG\t<CN0>\t100\tPASS\tAC=3930;AF=0.784744;AFR_AF=0.9682;AMR_AF=0.6715;AN=5008;CIEND=-50,212;CIPOS=-212,50;CS=DEL_union;EAS_AF=0.7847;END=233963557;EUR_AF=0.7406;MC=YL_CN_PEL_301,YL_CN_PJL_340,YL_CN_MXL_240,EM_DL_DEL1085517,YL_CN_KHV_343,YL_CN_ACB_336,YL_CN_CLM_245,YL_CN_STU_294,YL_CN_JPT_320,YL_CN_TSI_263,YL_CN_ESN_312,YL_CN_ASW_318,YL_CN_FIN_294,YL_CN_PUR_375,YL_CN_GBR_303;NS=2504;SAS_AF=0.6626;SVTYPE=DEL\tGT\t0|1\n1\t234805728\tALU_umary_ALU_884\tT\t<INS:ME:ALU>\t.\t.\tAC=1603;AF=0.320088;AFR_AF=0.4077;AMR_AF=0.3141;AN=5008;CS=ALU_umary;EAS_AF=0.1429;EUR_AF=0.4274;MEINFO=AluYa5,1,281,-;NS=2504;SAS_AF=0.2781;SITEPOST=1;SVLEN=280;SVTYPE=ALU;TSD=TGATTATATGTTTTCT\tGT\t1|1\n1\t236548998\tYL_CN_IBS_251\tT\t<CN0>\t100\tPASS\tAC=4434;AF=0.885383;AFR_AF=0.8336;AMR_AF=0.9107;AN=5008;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0.9395;END=236551425;EUR_AF=0.8559;MC=YL_CN_ITU_321;NS=2504;SAS_AF=0.9121;SVTYPE=DEL\tGT\t1|1\n1\t236594925\tDEL_pindel_2199\tTAAGACCCCAGGCAGGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGCGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCCGACCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAA\tT\t.\tPASS\tAC=1543;AF=0.308107;AFR_AF=0.1271;AMR_AF=0.3963;AN=5008;CS=DEL_pindel;EAS_AF=0.25;END=236595250;EUR_AF=0.4632;MEINFO=AluYb6_2,1,281,+;NS=2504;SAS_AF=0.3906;SITEPOST=0.9992;SVTYPE=DEL_ALU\tGT\t0|1\n1\t237569208\tALU_umary_ALU_889\tT\t<INS:ME:ALU>\t.\t.\tAC=1071;AF=0.213858;AFR_AF=0.0961;AMR_AF=0.2089;AN=5008;CS=ALU_umary;EAS_AF=0.2738;EUR_AF=0.2495;MEINFO=AluYa5,1,277,-;NS=2504;SAS_AF=0.2781;SITEPOST=1;SVLEN=276;SVTYPE=ALU;TSD=GAAAAAACTTTCTT\tGT\t1|1\n1\t239780157\tALU_umary_ALU_899\tA\t<INS:ME:ALU>\t.\t.\tAC=589;AF=0.117612;AFR_AF=0.2315;AMR_AF=0.0605;AN=5008;CS=ALU_umary;EAS_AF=0.0595;EUR_AF=0.1074;MEINFO=AluYb8,1,276,+;NS=2504;SAS_AF=0.0746;SITEPOST=1;SVLEN=275;SVTYPE=ALU;TSD=AAAAATATTCCA\tGT\t0|1\n1\t240134858\tALU_umary_ALU_901\tA\t<INS:ME:ALU>\t.\t.\tAC=465;AF=0.0928514;AFR_AF=0.0446;AMR_AF=0.0836;AN=5008;CS=ALU_umary;EAS_AF=0.0774;EUR_AF=0.161;MEINFO=AluUndef,1,281,-;NS=2504;SAS_AF=0.1104;SITEPOST=1;SVLEN=280;SVTYPE=ALU;TSD=null\tGT\t0|1\n1\t240616990\tDEL_pindel_2223\tTAAAAATGGAAGGCATAGGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAAGACAAAAAATTAGCCGGGCGCGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCCGGCCTGGGCGACAGAGCGAGACTCTGCCTCAAAAAAAAAAAAAAAAAAA\tT\t.\tPASS\tAC=2731;AF=0.545327;AFR_AF=0.5144;AMR_AF=0.5893;AN=5008;CS=DEL_pindel;EAS_AF=0.5188;END=240617314;EUR_AF=0.5915;MEINFO=AluYb6_2,1,281,+;NS=2504;SAS_AF=0.5358;SITEPOST=0.9904;SVTYPE=DEL_ALU\tGT\t1|0\n1\t241149856\tDEL_pindel_2235\tTTAAACACCACTATTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTGTCGCCCAGGCTGGAGTGCAGTGGCGCAATCTCGGCTCACTGCAGGCTCCGCCCCCTGGGGTTCACGCCATTCTCCTGCCTCAGCCTCCGGAGTAGCTGGGACTACAGGCGCCCGCCACCTCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACAGGGTTTCACCGTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC\tT\t.\tPASS\tAC=3841;AF=0.766973;AFR_AF=0.77;AMR_AF=0.7666;AN=5008;CS=DEL_pindel;EAS_AF=0.7639;END=241150181;EUR_AF=0.7465;MEINFO=AluYe,1,281,-;NS=2504;SAS_AF=0.7873;SITEPOST=0.9753;SVTYPE=DEL_ALU\tGT\t0|1\n1\t241360537\tDEL_pindel_2240\tACTAATCAAAGTATCTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGC\tA\t.\tPASS\tAC=3132;AF=0.625399;AFR_AF=0.6067;AMR_AF=0.6844;AN=5008;CS=DEL_pindel;EAS_AF=0.6815;END=241360852;EUR_AF=0.6322;MEINFO=AluYa5,2,281,-;NS=2504;SAS_AF=0.544;SITEPOST=0.96105;SVTYPE=DEL_ALU\tGT\t1|0\n1\t241586225\tBI_GS_DEL1_B5_P0242_742\tG\t<CN0>\t100\tPASS\tAC=2461;AF=0.491414;AFR_AF=0.2905;AMR_AF=0.4971;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.7639;END=241586489;EUR_AF=0.4085;NS=2504;SAS_AF=0.5634;SVTYPE=DEL\tGT\t1|1\n1\t243127774\tBI_GS_DEL1_B2_P0244_78\tC\t<CN0>\t100\tPASS\tAC=1536;AF=0.306709;AFR_AF=0.2315;AMR_AF=0.402;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.3889;END=243129222;EUR_AF=0.2972;MC=UW_VH_5575,YL_CN_GBR_311,YL_CN_CHB_346,YL_CN_CHS_334,UW_VH_4,YL_CN_FIN_304,SI_BD_1307,YL_CN_GWD_420,YL_CN_PEL_315,YL_CN_JPT_334,YL_CN_CDX_295,UW_VH_19306,YL_CN_CEU_383,YL_CN_TSI_276,YL_CN_ASW_329;NS=2504;SAS_AF=0.2658;SVTYPE=DEL\tGT\t0|1\n1\t243782747\tBI_GS_DEL1_B1_P0244_512\tA\t<CN0>\t100\tPASS\tAC=2169;AF=0.433107;AFR_AF=0.1233;AMR_AF=0.5605;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.5;END=243783759;EUR_AF=0.665;MC=YL_CN_IBS_254,YL_CN_KHV_355,YL_CN_JPT_335,SI_BD_1310,EM_DL_DEL1089702,YL_CN_STU_304,YL_CN_PUR_387,UW_VH_159;NS=2504;SAS_AF=0.454;SVTYPE=DEL\tGT\t1|1\n1\t246167282\tDEL_pindel_2307\tAGGGCATGGGAGCAAAACCACATGCTTTGGCTCAGACCTCGATTGGAATTCGGGCACCGCCACTTACTAAGGGGCCTTCTCAAGCCTGTCTCCTATCT\tA\t.\tPASS\tAC=1311;AF=0.261781;AFR_AF=0.062;AMR_AF=0.4438;AN=5008;CS=DEL_pindel;EAS_AF=0.0734;END=246167379;EUR_AF=0.5398;NS=2504;SAS_AF=0.3108;SITEPOST=0.9991;SVTYPE=DEL\tGT\t1|1\n1\t248839443\tYL_CN_BEB_277\tC\t<CN0>\t100\tPASS\tAC=4036;AF=0.805911;AFR_AF=0.5696;AMR_AF=0.9063;AN=5008;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0.7837;END=248841018;EUR_AF=0.9175;NS=2504;SAS_AF=0.9622;SVTYPE=DEL\tGT\t1|1\n2\t296361\tDEL_pindel_2367\tAGTGCTGACAACCAGGTGTGATACCCTCACATGTACAAGCACTGTGCATTTCAGAGGTGACCTT\tA\t.\tPASS\tAC=924;AF=0.184505;AFR_AF=0.1203;AMR_AF=0.1801;AN=5008;CS=DEL_pindel;EAS_AF=0.1706;END=296424;EUR_AF=0.2376;NS=2504;SAS_AF=0.2342;SITEPOST=0.9994;SVTYPE=DEL\tGT\t0|1\n2\t2539950\tALU_umary_ALU_965\tT\t<INS:ME:ALU>\t.\t.\tAC=1862;AF=0.371805;AFR_AF=0.1362;AMR_AF=0.487;AN=5008;CS=ALU_umary;EAS_AF=0.4534;EUR_AF=0.4364;MEINFO=AluUndef,1,281,-;NS=2504;SAS_AF=0.4581;SITEPOST=1;SVLEN=280;SVTYPE=ALU;TSD=TCAGCGGGTATTTTTT\tGT\t0|1\n2\t2798774\tBI_GS_DEL1_B5_P0253_926\tC\t<CN0>\t100\tPASS\tAC=2007;AF=0.400759;AFR_AF=0.4584;AMR_AF=0.438;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.1796;END=2799246;EUR_AF=0.6093;MC=UW_VH_162,UW_VH_10421;NS=2504;SAS_AF=0.3098;SVTYPE=DEL\tGT\t1|1\n2\t3718461\tALU_umary_ALU_971\tG\t<INS:ME:ALU>\t.\t.\tAC=691;AF=0.137979;AFR_AF=0.2428;AMR_AF=0.0951;AN=5008;CS=ALU_umary;EAS_AF=0.0347;EUR_AF=0.16;MEINFO=AluUndef,1,268,+;NS=2504;SAS_AF=0.1104;SITEPOST=1;SVLEN=267;SVTYPE=ALU;TSD=AGAAGG\tGT\t1|1\n2\t5562912\tALU_umary_ALU_979\tT\t<INS:ME:ALU>\t.\t.\tAC=1083;AF=0.216254;AFR_AF=0.0431;AMR_AF=0.3012;AN=5008;CS=ALU_umary;EAS_AF=0.2976;EUR_AF=0.1988;MEINFO=AluUndef,16,281,+;NS=2504;SAS_AF=0.3241;SITEPOST=1;SVLEN=265;SVTYPE=ALU;TSD=AAAAAATTCTGAGTGGT\tGT\t1|0\n2\t6693415\tBI_GS_DEL1_B1_P0257_656\tT\t<CN0>\t100\tPASS\tAC=2;AF=0.00039936;AFR_AF=0;AMR_AF=0;AN=5008;CIEND=-20,21;CIPOS=-20,21;CS=DEL_union;EAS_AF=0;END=6707844;EUR_AF=0.002;MC=YL_CN_FIN_343,EM_DL_DEL49960;NS=2504;SAS_AF=0;SVTYPE=DEL\tGT\t0|1\n2\t9959221\tDEL_pindel_2583\tCCCCAGTTTTTTTTTTTGTTTTTTTTTTTGTTTTGTTTTGTTTTTTTTTTGTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCCAGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCCGCCTCGGCCTCCGAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGG\tC\t.\tPASS\tAC=2650;AF=0.529153;AFR_AF=0.5068;AMR_AF=0.5245;AN=5008;CS=DEL_pindel;EAS_AF=0.625;END=9959571;EUR_AF=0.4821;MEINFO=AluYb8,3,281,-;NS=2504;SAS_AF=0.5123;SITEPOST=0.97525;SVTYPE=DEL_ALU\tGT\t1|0\n2\t11426375\tALU_umary_ALU_1003\tT\t<INS:ME:ALU>\t.\t.\tAC=2021;AF=0.403554;AFR_AF=0.2481;AMR_AF=0.4409;AN=5008;CS=ALU_umary;EAS_AF=0.4891;EUR_AF=0.4513;MEINFO=AluYa5,1,281,-;NS=2504;SAS_AF=0.4499;SITEPOST=1;SVLEN=280;SVTYPE=ALU;TSD=TAAGCAGATGTTTTT\tGT\t0|1\n2\t15163766\tALU_umary_ALU_1018\tT\t<INS:ME:ALU>\t.\t.\tAC=1122;AF=0.224042;AFR_AF=0.2564;AMR_AF=0.1499;AN=5008;CS=ALU_umary;EAS_AF=0.1478;EUR_AF=0.2575;MEINFO=AluUndef,1,273,-;NS=2504;SAS_AF=0.2771;SITEPOST=1;SVLEN=272;SVTYPE=ALU;TSD=AAGATTATATCTT\tGT\t1|0\n2\t15166285\tDEL_pindel_2717\tTAAAAGTCTTTTCTGGCCGGGCACGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGCGGTGGCGGGCGCCTGTAGTCCCAGCTACTGGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCCGGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAA\tT\t.\tPASS\tAC=2292;AF=0.457668;AFR_AF=0.4531;AMR_AF=0.4914;AN=5008;CS=DEL_pindel;EAS_AF=0.5248;END=15166611;EUR_AF=0.4185;MEINFO=AluYb6_2,1,281,+;NS=2504;SAS_AF=0.411;SITEPOST=0.9774;SVTYPE=DEL_ALU\tGT\t0|1\n2\t15519553\tALU_umary_ALU_1019\tA\t<INS:ME:ALU>\t.\t.\tAC=2053;AF=0.409944;AFR_AF=0.4334;AMR_AF=0.4697;AN=5008;CS=ALU_umary;EAS_AF=0.1875;EUR_AF=0.5378;MEINFO=AluYc1,7,281,+;NS=2504;SAS_AF=0.4335;SITEPOST=1;SVLEN=274;SVTYPE=ALU;TSD=AAGAAGCTGATGGA\tGT\t1|1\n2\t16271567\tEM_DL_DEL50186\tT\t<CN0>\t100\tPASS\tAC=2669;AF=0.532947;AFR_AF=0.6536;AMR_AF=0.598;AN=5008;CIEND=-150,150;CIPOS=-150,150;CS=DEL_union;EAS_AF=0.256;END=16273799;EUR_AF=0.7227;MC=BI_GS_DEL1_B1_P0267_243,YL_CN_STU_339,UW_VH_15145,UW_VH_11076,YL_CN_KHV_395,UW_VH_2151,YL_CN_CHB_390,UW_VH_14722;NS=2504;SAS_AF=0.4141;SVTYPE=DEL\tGT\t1|1\n2\t17585118\tUW_VH_3738\tA\t<CN0>\t100\tPASS\tAC=764;AF=0.152556;AFR_AF=0.3207;AMR_AF=0.1816;AN=5008;CIEND=0,394;CIPOS=-439,0;CS=DEL_union;EAS_AF=0.0873;END=17590610;EUR_AF=0.0487;MC=BI_GS_DEL1_B5_P0268_792,EM_DL_DEL50227,YL_CN_MXL_282,SI_BD_1545;NS=2504;SAS_AF=0.0787;SVTYPE=DEL\tGT\t1|0\n2\t18306417\tALU_umary_ALU_1029\tT\t<INS:ME:ALU>\t.\t.\tAC=207;AF=0.0413339;AFR_AF=0.1029;AMR_AF=0.0346;AN=5008;CS=ALU_umary;EAS_AF=0;EUR_AF=0.0169;MEINFO=AluYg6,1,281,+;NS=2504;SAS_AF=0.0307;SITEPOST=1;SVLEN=280;SVTYPE=ALU;TSD=AAGAAAGGAAAAAAT\tGT\t1|0\n2\t20666665\tDEL_pindel_2820\tTAAAATGCCATGTGGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCATCTCAAAAAAAAAAAAA\tT\t.\tPASS\tAC=3227;AF=0.644369;AFR_AF=0.674;AMR_AF=0.6484;AN=5008;CS=DEL_pindel;EAS_AF=0.7411;END=20666972;EUR_AF=0.5;MEINFO=AluYa4b,1,281,+;NS=2504;SAS_AF=0.6503;SITEPOST=0.98225;SVTYPE=DEL_ALU\tGT\t1|1\n2\t23191016\tL1_umary_LINE1_267\tT\t<INS:ME:LINE1>\t.\t.\tAC=2278;AF=0.454872;AFR_AF=0.3139;AMR_AF=0.4308;AN=5008;CS=L1_umary;EAS_AF=0.5853;EUR_AF=0.4573;MEINFO=LINE1,1,6018,-;NS=2504;SAS_AF=0.5256;SITEPOST=1;SVLEN=6017;SVTYPE=LINE1;TSD=CCTGAGACTGGGTAATTTAT\tGT\t1|0\n2\t26623683\tALU_umary_ALU_1074\tT\t<INS:ME:ALU>\t.\t.\tAC=878;AF=0.175319;AFR_AF=0.1324;AMR_AF=0.1844;AN=5008;CS=ALU_umary;EAS_AF=0.0139;EUR_AF=0.2992;MEINFO=AluUndef,1,280,-;NS=2504;SAS_AF=0.2658;SITEPOST=1;SVLEN=279;SVTYPE=ALU;TSD=GGAAGAACTGATTTT\tGT\t0|1\n2\t27527254\tALU_umary_ALU_1075\tA\t<INS:ME:ALU>\t.\t.\tAC=1682;AF=0.335863;AFR_AF=0.3404;AMR_AF=0.3386;AN=5008;CS=ALU_umary;EAS_AF=0.3393;EUR_AF=0.3559;MEINFO=AluY,2,196,-;NS=2504;SAS_AF=0.3037;SITEPOST=1;SVLEN=194;SVTYPE=ALU;TSD=null\tGT\t0|1\n2\t28353920\tDEL_pindel_2961\tTTATTATTATTATTATTATTATTATTATTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC\tT\t.\tPASS\tAC=2985;AF=0.596046;AFR_AF=0.6422;AMR_AF=0.4942;AN=5008;CS=DEL_pindel;EAS_AF=0.4534;END=28354247;EUR_AF=0.6521;MEINFO=AluYa4_5,1,281,-;NS=2504;SAS_AF=0.6953;SITEPOST=0.9966;SVTYPE=DEL_ALU\tGT\t1|1\n2\t28661665\tDEL_pindel_2968\tTCTAGCTCGAGTTCAGATCTCTTATGTGAGCCCCTGACGCTGCGGACCTGCCCC\tT\t.\tPASS\tAC=1557;AF=0.310903;AFR_AF=0.1914;AMR_AF=0.2464;AN=5008;CS=DEL_pindel;EAS_AF=0.6488;END=28661718;EUR_AF=0.2386;NS=2504;SAS_AF=0.2444;SITEPOST=0.9994;SVTYPE=DEL\tGT\t0|1\n2\t28720773\tBI_GS_DEL1_B1_P0279_634\tA\t<CN0>\t100\tPASS\tAC=46;AF=0.0091853;AFR_AF=0;AMR_AF=0.0216;AN=5008;CIEND=-4,4;CIPOS=-4,4;CS=DEL_union;EAS_AF=0;END=28721321;EUR_AF=0.0278;MC=UW_VH_3148;NS=2504;SAS_AF=0.0031;SVTYPE=DEL\tGT\t1|0\n2\t31559696\tALU_umary_ALU_1092\tC\t<INS:ME:ALU>\t.\t.\tAC=3410;AF=0.680911;AFR_AF=0.7012;AMR_AF=0.647;AN=5008;CS=ALU_umary;EAS_AF=0.6825;EUR_AF=0.672;MEINFO=AluYa5,1,281,+;NS=2504;SAS_AF=0.6851;SITEPOST=0.9999;SVLEN=280;SVTYPE=ALU;TSD=AAAAAGAGAAAGCCCC\tGT\t1|1\n2\t31952210\tALU_umary_ALU_1094\tG\t<INS:ME:ALU>\t.\t.\tAC=3223;AF=0.64357;AFR_AF=0.6218;AMR_AF=0.6484;AN=5008;CS=ALU_umary;EAS_AF=0.6558;EUR_AF=0.6481;MEINFO=AluYa5,2,281,+;NS=2504;SAS_AF=0.6524;SITEPOST=1;SVLEN=279;SVTYPE=ALU;TSD=AAAAAGTAGAATGG\tGT\t1|1\n2\t33091742\tL1_umary_LINE1_278\tC\t<INS:ME:LINE1>\t.\t.\tAC=1597;AF=0.31889;AFR_AF=0.447;AMR_AF=0.2334;AN=5008;CS=L1_umary;EAS_AF=0.2431;EUR_AF=0.2296;MEINFO=LINE1,860,6001,-;NS=2504;SAS_AF=0.3763;SITEPOST=0.9798;SVLEN=5141;SVTYPE=LINE1;TSD=null\tGT\t1|0\n2\t33764554\tCINV_delly_INV00056184\tG\t<INV>\t.\tPASS\tAC=434;AF=0.0866613;AFR_AF=0.0212;AMR_AF=0.1859;AN=5008;CIEND=-170,170;CIPOS=-170,170;CS=CINV_delly;EAS_AF=0.0069;END=33765272;EUR_AF=0.1521;IMPRECISE;NS=2504;SAS_AF=0.1196;SVTYPE=INV\tGT\t0|1\n2\t34255392\tALU_umary_ALU_1117\tT\t<INS:ME:ALU>\t.\t.\tAC=1486;AF=0.296725;AFR_AF=0.4017;AMR_AF=0.2695;AN=5008;CS=ALU_umary;EAS_AF=0.2897;EUR_AF=0.2813;MEINFO=AluUndef,8,281,-;NS=2504;SAS_AF=0.1973;SITEPOST=1;SVLEN=273;SVTYPE=ALU;TSD=CCATTCACAGTTCT\tGT\t1|1\n2\t34523576\tSI_BD_1647\tT\t<CN0>\t100\tPASS\tAC=2678;AF=0.534744;AFR_AF=0.3918;AMR_AF=0.6326;AN=5008;CIEND=-86,342;CIPOS=-342,131;CS=DEL_union;EAS_AF=0.8244;END=34525669;EUR_AF=0.4622;MC=UW_VH_1966,YL_CN_YRI_486,UW_VH_6136,EM_DL_DEL50926;NS=2504;SAS_AF=0.4346;SVTYPE=DEL\tGT\t1|1\n2\t34643630\tDEL_pindel_3116\tTAACTCTCTTGGAATTTCTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGCGCAGTGGCGCGATCTCGGCTCACTGCAAGCTCCGTCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCTACCACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC\tT\t.\tPASS\tAC=2583;AF=0.515775;AFR_AF=0.5605;AMR_AF=0.4885;AN=5008;CS=DEL_pindel;EAS_AF=0.4762;END=34643937;EUR_AF=0.4841;MEINFO=AluYc1,1,281,-;NS=2504;SAS_AF=0.5481;SITEPOST=0.9944;SVTYPE=DEL_ALU\tGT\t1|1\n2\t34965683\tBI_GS_DEL1_B3_P0285_43\tC\t<CN0>\t100\tPASS\tAC=133;AF=0.0265575;AFR_AF=0.0045;AMR_AF=0.0432;AN=5008;CIEND=-13,14;CIPOS=-13,14;CS=DEL_union;EAS_AF=0;END=34967221;EUR_AF=0.0885;MC=UW_VH_174,SI_BD_1655,EM_DL_DEL10526085;NS=2504;SAS_AF=0.0082;SVTYPE=DEL\tGT\t0|1\n2\t35975766\tYL_CN_CLM_306\tA\t<CN0>\t100\tPASS\tAC=2303;AF=0.459864;AFR_AF=0.5855;AMR_AF=0.3602;AN=5008;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0.4345;END=35997215;EUR_AF=0.4642;MC=BI_GS_CNV_2_35975937_35996316,EM_DL_DEL50966,SI_BD_1663;NS=2504;SAS_AF=0.3824;SVTYPE=DEL\tGT\t0|1\n2\t36955660\tDEL_pindel_3170\tTAAAGAAAAAATATTGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCAAGACTCCGTCTCAAAAAAAAAAAAAAAAAGAAA\tT\t.\tPASS\tAC=2266;AF=0.452476;AFR_AF=0.3608;AMR_AF=0.4611;AN=5008;CS=DEL_pindel;EAS_AF=0.4673;END=36955976;EUR_AF=0.5427;MEINFO=AluYa5,1,281,+;NS=2504;SAS_AF=0.4622;SITEPOST=0.9889;SVTYPE=DEL_ALU\tGT\t1|1\n2\t38956737\tDUP_gs_CNV_2_38956737_38974142\tG\t<CN2>\t.\tPASS\tAC=107;AF=0.0213658;AFR_AF=0.0053;AMR_AF=0.0259;AN=5008;CS=DUP_gs;EAS_AF=0;END=38974142;EUR_AF=0.0696;MC=DUP_delly_DUP51871;NS=2504;SAS_AF=0.0123;SITEPOST=1;SVTYPE=DUP\tGT\t1|0\n2\t39071477\tDEL_pindel_3202\tTAAAGAAATGATTAGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCGCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA\tT\t.\tPASS\tAC=3383;AF=0.675519;AFR_AF=0.5068;AMR_AF=0.7046;AN=5008;CS=DEL_pindel;EAS_AF=0.7113;END=39071819;EUR_AF=0.7336;MEINFO=AluYa4_5,1,281,+;NS=2504;SAS_AF=0.7863;SITEPOST=0.9546;SVTYPE=DEL_ALU\tGT\t1|1\n2\t39315339\tALU_umary_ALU_1136\tT\t<INS:ME:ALU>\t.\t.\tAC=2389;AF=0.477037;AFR_AF=0.5023;AMR_AF=0.4697;AN=5008;CS=ALU_umary;EAS_AF=0.4673;EUR_AF=0.4891;MEINFO=AluUndef,1,281,-;NS=2504;SAS_AF=0.4458;SITEPOST=1;SVLEN=280;SVTYPE=ALU;TSD=ATCAGTGGTTCTT\tGT\t0|1\n2\t40446946\tDEL_pindel_3235\tCTTTGTTTGCTATGCATGAGATTGCTTGAAAAATGTGATTTAGCTCCAACAGAGCCTCCCTACTATAGGATTTTTTTTTTTTTTTTTTTTTTTTTTTTAGAAAATCAATACATCTTTCTGTCAAAATT\tC\t.\tPASS\tAC=2643;AF=0.527756;AFR_AF=0.4743;AMR_AF=0.6859;AN=5008;CS=DEL_pindel;EAS_AF=0.3502;END=40447073;EUR_AF=0.7068;NS=2504;SAS_AF=0.4867;SITEPOST=0.9998;SVTYPE=DEL\tGT\t0|1\n2\t40613688\tALU_umary_ALU_1143\tG\t<INS:ME:ALU>\t.\t.\tAC=1099;AF=0.219449;AFR_AF=0.118;AMR_AF=0.2507;AN=5008;CS=ALU_umary;EAS_AF=0.0962;EUR_AF=0.3976;MEINFO=AluUndef,1,243,+;NS=2504;SAS_AF=0.2781;SITEPOST=1;SVLEN=242;SVTYPE=ALU;TSD=AAAAAAGAGATAATG\tGT\t1|1\n2\t41775944\tUW_VH_1967\tT\t<CN0>\t100\tPASS\tAC=1097;AF=0.21905;AFR_AF=0.0817;AMR_AF=0.2075;AN=5008;CIEND=0,453;CIPOS=-409,0;CS=DEL_union;EAS_AF=0.1062;END=41781288;EUR_AF=0.3777;MC=YL_CN_CDX_362,YL_CN_GIH_290,BI_GS_DEL1_B5_P0292_861,UW_VH_19271,YL_CN_CLM_317,YL_CN_PEL_380,YL_CN_STU_371;NS=2504;SAS_AF=0.3661;SVTYPE=DEL\tGT\t0|1\n2\t41973027\tYL_CN_BEB_318\tT\t<CN0>\t100\tPASS\tAC=3924;AF=0.783546;AFR_AF=0.8109;AMR_AF=0.8458;AN=5008;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0.7431;END=41976041;EUR_AF=0.7575;NS=2504;SAS_AF=0.771;SVTYPE=DEL\tGT\t1|1\n2\t43024076\tALU_umary_ALU_1149\tC\t<INS:ME:ALU>\t.\t.\tAC=2333;AF=0.465855;AFR_AF=0.4932;AMR_AF=0.4553;AN=5008;CS=ALU_umary;EAS_AF=0.498;EUR_AF=0.4056;MEINFO=AluUndef,2,281,-;NS=2504;SAS_AF=0.4652;SITEPOST=1;SVLEN=279;SVTYPE=ALU;TSD=CATTTTTTC\tGT\t0|1\n2\t46196199\tALU_umary_ALU_1167\tT\t<INS:ME:ALU>\t.\t.\tAC=946;AF=0.188898;AFR_AF=0.1997;AMR_AF=0.1787;AN=5008;CS=ALU_umary;EAS_AF=0.0724;EUR_AF=0.2197;MEINFO=AluYb8,2,280,+;NS=2504;SAS_AF=0.2699;SITEPOST=1;SVLEN=278;SVTYPE=ALU;TSD=AAAATATTCATTGAT\tGT\t0|1\n2\t46910132\tDEL_pindel_3338\tATCAGCTGCCTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCATTTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC\tA\t.\tPASS\tAC=2706;AF=0.540335;AFR_AF=0.6014;AMR_AF=0.5735;AN=5008;CS=DEL_pindel;EAS_AF=0.5119;END=46910448;EUR_AF=0.4881;MEINFO=AluYa5,1,281,-;NS=2504;SAS_AF=0.5174;SITEPOST=0.9968;SVTYPE=DEL_ALU\tGT\t0|1\n2\t46928953\tALU_umary_ALU_1171\tT\t<INS:ME:ALU>\t.\t.\tAC=2273;AF=0.453874;AFR_AF=0.5348;AMR_AF=0.4683;AN=5008;CS=ALU_umary;EAS_AF=0.3829;EUR_AF=0.3966;MEINFO=AluYa5,1,281,-;NS=2504;SAS_AF=0.4663;SITEPOST=1;SVLEN=280;SVTYPE=ALU;TSD=TTT\tGT\t0|1\n2\t47319298\tALU_umary_ALU_1172\tT\t<INS:ME:ALU>\t.\t.\tAC=1437;AF=0.286941;AFR_AF=0.2844;AMR_AF=0.3199;AN=5008;CS=ALU_umary;EAS_AF=0.249;EUR_AF=0.3499;MEINFO=AluUndef,1,276,-;NS=2504;SAS_AF=0.2413;SITEPOST=1;SVLEN=275;SVTYPE=ALU;TSD=GCATTTTCTAATTTTTCT\tGT\t1|0\n2\t48276534\tALU_umary_ALU_1173\tA\t<INS:ME:ALU>\t.\t.\tAC=153;AF=0.0305511;AFR_AF=0.0053;AMR_AF=0.0461;AN=5008;CS=ALU_umary;EAS_AF=0;EUR_AF=0.1074;MEINFO=AluY,1,281,+;NS=2504;SAS_AF=0.0061;SITEPOST=1;SVLEN=280;SVTYPE=ALU;TSD=AGAAATTCAAATGCA\tGT\t0|1\n2\t48990526\tBI_GS_DEL1_B5_P0299_1144\tT\t<CN0>\t100\tPASS\tAC=693;AF=0.138379;AFR_AF=0.1846;AMR_AF=0.1455;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.0129;END=48991166;EUR_AF=0.2525;NS=2504;SAS_AF=0.0828;SVTYPE=DEL\tGT\t0|1\n2\t49612882\tDEL_pindel_3413\tACAATATTTTTACTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCTGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGC\tA\t.\tPASS\tAC=3546;AF=0.708067;AFR_AF=0.6702;AMR_AF=0.7046;AN=5008;CS=DEL_pindel;EAS_AF=0.751;END=49613205;EUR_AF=0.7068;MEINFO=AluYa5,2,281,-;NS=2504;SAS_AF=0.7188;SITEPOST=0.9657;SVTYPE=DEL_ALU\tGT\t1|1\n2\t50602644\tALU_umary_ALU_1192\tT\t<INS:ME:ALU>\t.\t.\tAC=2516;AF=0.502396;AFR_AF=0.5983;AMR_AF=0.4568;AN=5008;CS=ALU_umary;EAS_AF=0.6796;EUR_AF=0.3598;MEINFO=AluUndef,1,278,-;NS=2504;SAS_AF=0.3691;SITEPOST=1;SVLEN=277;SVTYPE=ALU;TSD=AATTCTGAAGCTCTT\tGT\t0|1\n2\t51469239\tALU_umary_ALU_1198\tT\t<INS:ME:ALU>\t.\t.\tAC=476;AF=0.0950479;AFR_AF=0.0961;AMR_AF=0.0951;AN=5008;CS=ALU_umary;EAS_AF=0.1042;EUR_AF=0.0974;MEINFO=AluYb8,34,280,+;NS=2504;SAS_AF=0.0818;SITEPOST=1;SVLEN=246;SVTYPE=ALU;TSD=AAAATCATAAATTTT\tGT\t1|0\n2\t51926595\tUW_VH_182\tA\t<CN0>\t100\tPASS\tAC=339;AF=0.0676917;AFR_AF=0.0045;AMR_AF=0.1715;AN=5008;CIEND=0,426;CIPOS=-547,0;CS=DEL_union;EAS_AF=0.002;END=51927817;EUR_AF=0.1173;MC=BI_GS_DEL1_B5_P0302_1006,EM_DL_DEL10532247,SI_BD_1759;NS=2504;SAS_AF=0.0961;SVTYPE=DEL\tGT\t0|1\n2\t52749687\tBI_GS_DEL1_B1_P0303_584\tC\t<CN0>\t100\tPASS\tAC=1445;AF=0.288538;AFR_AF=0.0492;AMR_AF=0.2104;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.5327;END=52785269;EUR_AF=0.325;MC=UW_VH_3135,EM_DL_DEL51405,UW_VH_21074,YL_CN_ASW_427,UW_VH_6984,UW_VH_18672,UW_VH_4472,SI_BD_1762,UW_VH_11813;NS=2504;SAS_AF=0.3783;SVTYPE=DEL\tGT\t1|1\n2\t54565490\tUW_VH_25165\tT\t<CN0>\t100\tPASS\tAC=2866;AF=0.572284;AFR_AF=0.6271;AMR_AF=0.6484;AN=5008;CIEND=0,367;CIPOS=-301,0;CS=DEL_union;EAS_AF=0.3849;END=54567478;EUR_AF=0.7465;MC=EM_DL_DEL51576,UW_VH_2716,UW_VH_17090,UW_VH_13896,UW_VH_3431,UW_VH_19272,UW_VH_1969,SI_BD_1782,YL_CN_GBR_402,YL_CN_GIH_301,UW_VH_22040,UW_VH_5162,UW_VH_21075,UW_VH_11631;NS=2504;SAS_AF=0.4581;SVTYPE=DEL\tGT\t0|1\n2\t56652306\tUW_VH_1696\tG\t<CN0>\t100\tPASS\tAC=2059;AF=0.411142;AFR_AF=0.2292;AMR_AF=0.4049;AN=5008;CIEND=0,534;CIPOS=-404,0;CS=DEL_union;EAS_AF=0.5942;END=56655874;EUR_AF=0.4334;MC=SI_BD_1799,YL_CN_YRI_519,BI_GS_DEL1_B1_P0307_614,YL_CN_GWD_545,EM_DL_DEL51767;NS=2504;SAS_AF=0.4499;SVTYPE=DEL\tGT\t1|1\n2\t56850110\tDEL_pindel_3606\tACTAAGAAAATATCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCACTCTTTCGCCCAAGCTGGACTGCAGTGGCGCTATCCCGGCTCACTGCAAGCTCCGCCTCTTGGGTTCATGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGATTACAGGCGCCCACCACCACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGC\tA\t.\tPASS\tAC=2182;AF=0.435703;AFR_AF=0.5197;AMR_AF=0.3732;AN=5008;CS=DEL_pindel;EAS_AF=0.4722;END=56850433;EUR_AF=0.4026;MEINFO=AluYb,2,281,-;NS=2504;SAS_AF=0.363;SITEPOST=0.9951;SVTYPE=DEL_ALU\tGT\t1|0\n2\t57247962\tALU_umary_ALU_1221\tT\t<INS:ME:ALU>\t.\t.\tAC=1535;AF=0.30651;AFR_AF=0.2814;AMR_AF=0.1844;AN=5008;CS=ALU_umary;EAS_AF=0.4315;EUR_AF=0.3091;MEINFO=AluYb8,1,280,-;NS=2504;SAS_AF=0.2955;SITEPOST=1;SVLEN=279;SVTYPE=ALU;TSD=GTATGTCTTCTTTT\tGT\t0|1\n2\t59644944\tDEL_pindel_3661\tATATATATATATATATATATATATATATATATATATATATATATACACTTC\tA\t.\tPASS\tAC=2671;AF=0.533347;AFR_AF=0.382;AMR_AF=0.6484;AN=5008;CS=DEL_pindel;EAS_AF=0.6359;END=59644994;EUR_AF=0.5398;NS=2504;SAS_AF=0.544;SITEPOST=0.9966;SVTYPE=DEL\tGT\t1|1\n2\t59874277\tALU_umary_ALU_1237\tG\t<INS:ME:ALU>\t.\t.\tAC=587;AF=0.117212;AFR_AF=0.0408;AMR_AF=0.147;AN=5008;CS=ALU_umary;EAS_AF=0.1091;EUR_AF=0.16;MEINFO=AluUndef,71,276,+;NS=2504;SAS_AF=0.1636;SITEPOST=1;SVLEN=205;SVTYPE=ALU;TSD=AACAGAAAAATAACTACAAGGG\tGT\t1|0\n2\t62457099\tDEL_pindel_3711\tTTATAATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTGTCGCTCTGTCGCCCAGGTCGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTGGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC\tT\t.\tPASS\tAC=864;AF=0.172524;AFR_AF=0.1316;AMR_AF=0.2363;AN=5008;CS=DEL_pindel;EAS_AF=0.1925;END=62457426;EUR_AF=0.1252;MEINFO=AluYb6_2,1,281,-;NS=2504;SAS_AF=0.2106;SITEPOST=0.9989;SVTYPE=DEL_ALU\tGT\t0|1\n2\t62501912\tALU_umary_ALU_1246\tT\t<INS:ME:ALU>\t.\t.\tAC=1834;AF=0.366214;AFR_AF=0.3003;AMR_AF=0.3718;AN=5008;CS=ALU_umary;EAS_AF=0.4524;EUR_AF=0.3082;MEINFO=AluUndef,1,281,-;NS=2504;SAS_AF=0.4223;SITEPOST=1;SVLEN=280;SVTYPE=ALU;TSD=AGCTATACATTCTT\tGT\t1|1\n2\t64694288\tBI_GS_DEL1_B1_P0315_676\tT\t<CN0>\t100\tPASS\tAC=4;AF=0.00079872;AFR_AF=0;AMR_AF=0;AN=5008;CIEND=-1,1;CIPOS=-1,1;CS=DEL_union;EAS_AF=0;END=64705094;EUR_AF=0.004;MC=YL_CN_FIN_413,EM_DL_DEL51975,SI_BD_1855;NS=2504;SAS_AF=0;SVTYPE=DEL\tGT\t1|0\n2\t65807507\tDEL_pindel_3759\tTCATGTTACTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTGTCGCCCAGGCTGGAGTGCAGTGGCGCAATCTCGGCTCACTGCAGGCTCCGCCCCCTGGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCTGCCACCTCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACAGGGTTTCACCGTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC\tT\t.\tPASS\tAC=3458;AF=0.690495;AFR_AF=0.7368;AMR_AF=0.5836;AN=5008;CS=DEL_pindel;EAS_AF=0.6567;END=65807817;EUR_AF=0.7127;MEINFO=AluYe,1,281,-;NS=2504;SAS_AF=0.7157;SITEPOST=0.9949;SVTYPE=DEL_ALU\tGT\t1|0\n2\t66505568\tBI_GS_DEL1_B1_P0317_504\tA\t<CN0>\t100\tPASS\tAC=860;AF=0.171725;AFR_AF=0.0711;AMR_AF=0.147;AN=5008;CIEND=-1,1;CIPOS=-1,1;CS=DEL_union;EAS_AF=0.2302;END=66507543;EUR_AF=0.1859;MC=UW_VH_4845,UW_VH_1971,UW_VH_6004,UW_VH_1697,UW_VH_14367,YL_CN_GBR_412,UW_VH_7321,UW_VH_25166,UW_VH_18414,EM_DL_DEL10537604,UW_VH_4725;NS=2504;SAS_AF=0.2505;SVTYPE=DEL\tGT\t0|1\n2\t66658991\tALU_umary_ALU_1261\tA\t<INS:ME:ALU>\t.\t.\tAC=2213;AF=0.441893;AFR_AF=0.3555;AMR_AF=0.4049;AN=5008;CS=ALU_umary;EAS_AF=0.3333;EUR_AF=0.5388;MEINFO=AluUndef,1,279,+;NS=2504;SAS_AF=0.5971;SITEPOST=1;SVLEN=278;SVTYPE=ALU;TSD=AGAAAACAAAAGAA\tGT\t1|1\n2\t70125033\tBI_GS_DEL1_B3_P0321_5\tT\t<CN0>\t100\tPASS\tAC=2885;AF=0.576078;AFR_AF=0.823;AMR_AF=0.4006;AN=5008;CIEND=0,1;CIPOS=0,1;CS=DEL_union;EAS_AF=0.5417;END=70125561;EUR_AF=0.4423;MC=DEL_pindel_3833,UW_VH_186;NS=2504;SAS_AF=0.5399;SVTYPE=DEL\tGT\t1|1\n2\t70797718\tALU_umary_ALU_1287\tT\t<INS:ME:ALU>\t.\t.\tAC=1062;AF=0.212061;AFR_AF=0.053;AMR_AF=0.2594;AN=5008;CS=ALU_umary;EAS_AF=0.2629;EUR_AF=0.2992;MEINFO=AluYa5,1,276,-;NS=2504;SAS_AF=0.2515;SITEPOST=1;SVLEN=275;SVTYPE=ALU;TSD=CCCTCCTTCTAATTCTATT\tGT\t1|0\n2\t72244731\tALU_umary_ALU_1290\tT\t<INS:ME:ALU>\t.\t.\tAC=1273;AF=0.254193;AFR_AF=0.2504;AMR_AF=0.2896;AN=5008;CS=ALU_umary;EAS_AF=0.1577;EUR_AF=0.2744;MEINFO=AluUndef,2,281,-;NS=2504;SAS_AF=0.3129;SITEPOST=0.919;SVLEN=279;SVTYPE=ALU;TSD=null\tGT\t0|1\n2\t72440495\tCINV_delly_INV00057450\tG\t<INV>\t.\tPASS\tAC=407;AF=0.08127;AFR_AF=0.0189;AMR_AF=0.1729;AN=5008;CIEND=-136,136;CIPOS=-136,136;CS=CINV_delly;EAS_AF=0.0208;END=72441373;EUR_AF=0.1491;IMPRECISE;NS=2504;SAS_AF=0.093;SVTYPE=INV\tGT\t0|1\n2\t75387903\tALU_umary_ALU_1307\tA\t<INS:ME:ALU>\t.\t.\tAC=1939;AF=0.387181;AFR_AF=0.2973;AMR_AF=0.4409;AN=5008;CS=ALU_umary;EAS_AF=0.38;EUR_AF=0.4493;MEINFO=AluYc1,3,278,+;NS=2504;SAS_AF=0.4141;SITEPOST=1;SVLEN=275;SVTYPE=ALU;TSD=AAGACATAACCGA\tGT\t1|0\n2\t76257717\tALU_umary_ALU_1312\tT\t<INS:ME:ALU>\t.\t.\tAC=149;AF=0.0297524;AFR_AF=0.0015;AMR_AF=0.0303;AN=5008;CS=ALU_umary;EAS_AF=0.001;EUR_AF=0.0875;MEINFO=AluUndef,74,281,-;NS=2504;SAS_AF=0.0378;SITEPOST=1;SVLEN=207;SVTYPE=ALU;TSD=TTTCACCTATTTGCATATTCTTTTTTT\tGT\t1|0\n2\t79057647\tDEL_pindel_4049\tTATGAGTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCATTTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC\tT\t.\tPASS\tAC=2091;AF=0.417532;AFR_AF=0.4887;AMR_AF=0.4063;AN=5008;CS=DEL_pindel;EAS_AF=0.3591;END=79057983;EUR_AF=0.3867;MEINFO=AluYa5,1,281,-;NS=2504;SAS_AF=0.4213;SITEPOST=0.9998;SVTYPE=DEL_ALU\tGT\t0|1\n2\t82340445\tDEL_pindel_4092\tATATTTTAACAGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCAC\tA\t.\tPASS\tAC=3037;AF=0.60643;AFR_AF=0.6029;AMR_AF=0.634;AN=5008;CS=DEL_pindel;EAS_AF=0.6448;END=82340765;EUR_AF=0.6342;MEINFO=AluYa4_4,12,281,-;NS=2504;SAS_AF=0.5235;SITEPOST=0.9885;SVTYPE=DEL_ALU\tGT\t1|1\n2\t84590146\tALU_umary_ALU_1350\tC\t<INS:ME:ALU>\t.\t.\tAC=745;AF=0.148762;AFR_AF=0.1082;AMR_AF=0.2061;AN=5008;CS=ALU_umary;EAS_AF=0.0665;EUR_AF=0.2475;MEINFO=AluYa5,1,280,-;NS=2504;SAS_AF=0.1462;SITEPOST=1;SVLEN=279;SVTYPE=ALU;TSD=CAATAGACCCATCTC\tGT\t1|1\n2\t84728755\tALU_umary_ALU_1354\tA\t<INS:ME:ALU>\t.\t.\tAC=3516;AF=0.702077;AFR_AF=0.6868;AMR_AF=0.7075;AN=5008;CS=ALU_umary;EAS_AF=0.7341;EUR_AF=0.6928;MEINFO=AluUndef,1,281,+;NS=2504;SAS_AF=0.6953;SITEPOST=1;SVLEN=280;SVTYPE=ALU;TSD=AAAAGTTTGGTAAA\tGT\t1|0\n2\t84758440\tDEL_pindel_4137\tTTTATTTTCCTTTTTTTTTTTATTTTTTATTTTTTTTTATTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGCGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCTACCACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCC\tT\t.\tPASS\tAC=3987;AF=0.796126;AFR_AF=0.7262;AMR_AF=0.8242;AN=5008;CS=DEL_pindel;EAS_AF=0.8194;END=84758733;EUR_AF=0.8201;MEINFO=AluYc1,41,281,-;NS=2504;SAS_AF=0.8221;SITEPOST=0.98055;SVTYPE=DEL_ALU\tGT\t1|1\n2\t88320968\tDEL_pindel_4162\tTAAGGAGATCGAGACCATCCCGGCTATAGCGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA\tT\t.\tPASS\tAC=4584;AF=0.915335;AFR_AF=0.7837;AMR_AF=0.9409;AN=5008;CS=DEL_pindel;EAS_AF=0.995;END=88321215;EUR_AF=0.9374;MEINFO=AluY,69,281,+;NS=2504;SAS_AF=0.9703;SITEPOST=1;SVTYPE=DEL_ALU\tGT\t1|1\n2\t89132270\tUW_VH_20227\tC\t<CN0>\t100\tPASS\tAC=1220;AF=0.24361;AFR_AF=0.2549;AMR_AF=0.1931;AN=5008;CIEND=0,68;CIPOS=-56,0;CS=DEL_union;EAS_AF=0.3065;END=89155860;EUR_AF=0.3419;MC=YL_CN_YRI_569,UW_VH_20057,YL_CN_CLM_370,UW_VH_25211,UW_VH_14563;NS=2504;SAS_AF=0.0982;SVTYPE=DEL\tGT\t1|0\n2\t91865750\tDUP_gs_CNV_2_91865750_91925129\tC\t<CN2>,<CN3>\t.\tPASS\tAC=4963,4;AF=0.991014,0.00079872;AFR_AF=0.9826,0.0008;AMR_AF=0.9986,0;AN=5008;CS=DUP_gs;EAS_AF=0.9881,0;END=91925129;EUR_AF=0.995,0.001;NS=2504;SAS_AF=0.9959,0.002;SITEPOST=1;SVTYPE=CNV\tGT\t1|1\n2\t97854287\tUW_VH_3901\tA\t<CN0>\t100\tPASS\tAC=1794;AF=0.358227;AFR_AF=0.0968;AMR_AF=0.4914;AN=5008;CIEND=0,494;CIPOS=-298,0;CS=DEL_union;EAS_AF=0.2391;END=97856138;EUR_AF=0.7922;MC=YL_CN_CEU_603,SI_BD_2028,YL_CN_PUR_565;NS=2504;SAS_AF=0.2935;SVTYPE=DEL\tGT\t1|1\n2\t98136216\tDUP_gs_CNV_2_98136216_98156567\tA\t<CN0>,<CN2>\t.\tPASS\tAC=1913,2;AF=0.381989,0.00039936;AFR_AF=0.3411,0.0008;AMR_AF=0.4366,0;AN=5008;CS=DUP_gs;EAS_AF=0.3036,0;END=98156567;EUR_AF=0.6491,0.001;NS=2504;SAS_AF=0.2045,0;SITEPOST=1;SVTYPE=CNV\tGT\t0|1\n2\t99752964\tDEL_pindel_4252\tCAAAAAAAGTATTTCTGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCATCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA\tC\t.\tPASS\tAC=2338;AF=0.466853;AFR_AF=0.3351;AMR_AF=0.4957;AN=5008;CS=DEL_pindel;EAS_AF=0.5873;END=99753300;EUR_AF=0.494;MEINFO=AluYa4b,2,281,+;NS=2504;SAS_AF=0.4724;SITEPOST=0.9949;SVTYPE=DEL_ALU\tGT\t0|1\n2\t100103689\tSI_BD_2034\tA\t<CN0>\t100\tPASS\tAC=2007;AF=0.400759;AFR_AF=0.4002;AMR_AF=0.6412;AN=5008;CIEND=-111,338;CIPOS=-338,97;CS=DEL_union;EAS_AF=0.3085;END=100105021;EUR_AF=0.4473;MC=YL_CN_MXL_394,YL_CN_JPT_522,YL_CN_CEU_613,YL_CN_IBS_409,UW_VH_2652,YL_CN_ACB_546,YL_CN_GWD_656,UW_VH_4938,YL_CN_PEL_471,EM_DL_DEL10549314,YL_CN_CLM_412;NS=2504;SAS_AF=0.2781;SVTYPE=DEL\tGT\t1|0\n2\t101975203\tDEL_pindel_4291\tTGAGAACTGAGGTGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGA\tT\t.\tPASS\tAC=2813;AF=0.561701;AFR_AF=0.3714;AMR_AF=0.5562;AN=5008;CS=DEL_pindel;EAS_AF=0.629;END=101975536;EUR_AF=0.671;MEINFO=AluYa5,1,281,+;NS=2504;SAS_AF=0.6411;SITEPOST=0.9886;SVTYPE=DEL_ALU\tGT\t1|0\n2\t106452585\tALU_umary_ALU_1406\tT\t<INS:ME:ALU>\t.\t.\tAC=1241;AF=0.247804;AFR_AF=0.4463;AMR_AF=0.2478;AN=5008;CS=ALU_umary;EAS_AF=0.1885;EUR_AF=0.1849;MEINFO=AluUndef,1,276,-;NS=2504;SAS_AF=0.1053;SITEPOST=1;SVLEN=275;SVTYPE=ALU;TSD=GGATTTCCTTTTCTTTGTT\tGT\t1|0\n2\t106694799\tYL_CN_YRI_643\tA\t<CN0>\t100\tPASS\tAC=2280;AF=0.455272;AFR_AF=0.4236;AMR_AF=0.3372;AN=5008;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0.4821;END=106696035;EUR_AF=0.4414;NS=2504;SAS_AF=0.5685;SVTYPE=DEL\tGT\t0|1\n2\t106695055\tBI_GS_DEL1_B5_P0357_929\tA\t<CN0>\t100\tPASS\tAC=2280;AF=0.455272;AFR_AF=0.4236;AMR_AF=0.3372;AN=5008;CIEND=0,1;CIPOS=0,1;CS=DEL_union;EAS_AF=0.4821;END=106695893;EUR_AF=0.4414;MC=SI_BD_2065,UW_VH_4964,UW_VH_11654,UW_VH_8771,UW_VH_18973,EM_DL_DEL10551696,UW_VH_197,UW_VH_7782;NS=2504;SAS_AF=0.5685;SVTYPE=DEL\tGT\t0|1\n2\t106695492\tBI_GS_DEL1_B2_P0357_583\tA\t<CN0>\t100\tPASS\tAC=2278;AF=0.454872;AFR_AF=0.4228;AMR_AF=0.3386;AN=5008;CIEND=-21,22;CIPOS=-21,22;CS=DEL_union;EAS_AF=0.4821;END=106695752;EUR_AF=0.4404;NS=2504;SAS_AF=0.5675;SVTYPE=DEL\tGT\t0|1\n2\t106880209\tDUP_gs_CNV_2_106880209_106885796\tT\t<CN0>,<CN2>\t.\tPASS\tAC=1761,1;AF=0.351637,0.00019968;AFR_AF=0.3419,0;AMR_AF=0.379,0;AN=5008;CS=DUP_gs;EAS_AF=0.4147,0;END=106885796;EUR_AF=0.3151,0;MC=SI_BD_2067,BI_GS_DEL1_B1_P0357_862,UW_VH_22064,UW_VH_5239,EM_DL_DEL53837,UW_VH_16569,YL_CN_STU_476,UW_VH_198,UW_VH_6517;NS=2504;SAS_AF=0.318,0.001;SITEPOST=1;SVTYPE=CNV\tGT\t0|1\n2\t106930527\tDEL_pindel_4367\tTTTTATATATATATATATGTATGTATATATATATATATGTATGTATGTGTGTGTGTATATATATATATATATATATATATATATATATATATATATATATATA\tT\t.\tPASS\tAC=1892;AF=0.377796;AFR_AF=0.267;AMR_AF=0.464;AN=5008;CS=DEL_pindel;EAS_AF=0.3006;END=106930629;EUR_AF=0.4483;NS=2504;SAS_AF=0.4734;SITEPOST=0.9885;SVTYPE=DEL\tGT\t1|0\n2\t111576391\tBI_GS_DEL1_B5_P0362_229\tA\t<CN0>\t100\tPASS\tAC=1637;AF=0.326877;AFR_AF=0.09;AMR_AF=0.3213;AN=5008;CIEND=-1,1;CIPOS=-1,1;CS=DEL_union;EAS_AF=0.3958;END=111576633;EUR_AF=0.4573;MC=DEL_pindel_4403;NS=2504;SAS_AF=0.4458;SVTYPE=DEL\tGT\t1|1\n2\t112447436\tALU_umary_ALU_1433\tC\t<INS:ME:ALU>\t.\t.\tAC=2108;AF=0.420927;AFR_AF=0.4213;AMR_AF=0.4107;AN=5008;CS=ALU_umary;EAS_AF=0.372;EUR_AF=0.4841;MEINFO=AluUndef,1,281,-;NS=2504;SAS_AF=0.4131;SITEPOST=1;SVLEN=280;SVTYPE=ALU;TSD=CCCAAATGATTTTC\tGT\t1|1\n2\t112453948\tALU_umary_ALU_1434\tT\t<INS:ME:ALU>\t.\t.\tAC=416;AF=0.0830671;AFR_AF=0.0779;AMR_AF=0.1268;AN=5008;CS=ALU_umary;EAS_AF=0.0952;EUR_AF=0.0746;MEINFO=AluUndef,2,281,-;NS=2504;SAS_AF=0.0552;SITEPOST=1;SVLEN=279;SVTYPE=ALU;TSD=GAGAGATTTATTTT\tGT\t0|1\n2\t114106446\tALU_umary_ALU_1441\tA\t<INS:ME:ALU>\t.\t.\tAC=1248;AF=0.249201;AFR_AF=0.087;AMR_AF=0.232;AN=5008;CS=ALU_umary;EAS_AF=0.381;EUR_AF=0.2614;MEINFO=AluUndef,1,281,+;NS=2504;SAS_AF=0.3323;SITEPOST=1;SVLEN=280;SVTYPE=ALU;TSD=AAGAAATCAGAAAA\tGT\t1|1\n2\t114151313\tSI_BD_2100\tA\t<CN0>\t100\tPASS\tAC=3640;AF=0.726837;AFR_AF=0.8056;AMR_AF=0.7046;AN=5008;CIEND=-50,296;CIPOS=-296,50;CS=DEL_union;EAS_AF=0.6577;END=114153614;EUR_AF=0.7445;NS=2504;SAS_AF=0.6892;SVTYPE=DEL\tGT\t1|0\n2\t115628104\tBI_GS_DEL1_B3_P0366_34\tC\t<CN0>\t100\tPASS\tAC=1550;AF=0.309505;AFR_AF=0.1437;AMR_AF=0.389;AN=5008;CIEND=0,1;CIPOS=0,1;CS=DEL_union;EAS_AF=0.5873;END=115628838;EUR_AF=0.2744;MC=SI_BD_2112,DEL_pindel_4458;NS=2504;SAS_AF=0.227;SVTYPE=DEL\tGT\t1|0\n2\t116662058\tBI_GS_DEL1_B4_P0367_141\tA\t<CN0>\t100\tPASS\tAC=528;AF=0.105431;AFR_AF=0.1074;AMR_AF=0.0879;AN=5008;CIEND=-1,1;CIPOS=-1,1;CS=DEL_union;EAS_AF=0.1052;END=116662652;EUR_AF=0.1074;MC=UW_VH_2292;NS=2504;SAS_AF=0.1135;SVTYPE=DEL\tGT\t1|0\n2\t117334924\tDEL_pindel_4498\tTAAAACCAGGTACGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATGACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAAATTAGCCGGACGTAGTGGCGGGTGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCAACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAA\tT\t.\tPASS\tAC=612;AF=0.122204;AFR_AF=0.0204;AMR_AF=0.0994;AN=5008;CS=DEL_pindel;EAS_AF=0.1171;END=117335240;EUR_AF=0.174;MEINFO=AluYa5,1,281,+;NS=2504;SAS_AF=0.228;SITEPOST=1;SVTYPE=DEL_ALU\tGT\t1|0\n2\t117893050\tDEL_pindel_4509\tTAAGAAATACATCCGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCATGAGGTCAAGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGCGGTGGCGGGCGCCTGTAGTCCCAGCTACTCAGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCCGGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAATAAAATAAAAAAAAAAAAAAAAA\tT\t.\tPASS\tAC=3573;AF=0.713458;AFR_AF=0.6906;AMR_AF=0.755;AN=5008;CS=DEL_pindel;EAS_AF=0.7054;END=117893389;EUR_AF=0.675;MEINFO=AluYb6_2,1,281,+;NS=2504;SAS_AF=0.7628;SITEPOST=0.9881;SVTYPE=DEL_ALU\tGT\t0|1\n2\t118906129\tDEL_pindel_4536\tTAAAAAGGCTTCTACTTGGGAGGCTGAGGCGGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAA\tT\t.\tPASS\tAC=2356;AF=0.470447;AFR_AF=0.6036;AMR_AF=0.402;AN=5008;CS=DEL_pindel;EAS_AF=0.3819;END=118906281;EUR_AF=0.4901;MEINFO=AluYa,169,281,+;NS=2504;SAS_AF=0.41;SITEPOST=0.9987;SVTYPE=DEL_ALU\tGT\t1|1\n2\t121797802\tBI_GS_DEL1_B2_P0372_743\tT\t<CN0>\t100\tPASS\tAC=2502;AF=0.499601;AFR_AF=0.3245;AMR_AF=0.5793;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.5089;END=121798397;EUR_AF=0.6909;MC=DEL_pindel_4580,UW_VH_201;NS=2504;SAS_AF=0.4734;SVTYPE=DEL\tGT\t1|0\n2\t122056855\tEM_DL_DEL10557193\tA\t<CN0>\t100\tPASS\tAC=819;AF=0.163538;AFR_AF=0.4228;AMR_AF=0.0778;AN=5008;CIEND=-150,150;CIPOS=-150,150;CS=DEL_union;EAS_AF=0.002;END=122058006;EUR_AF=0.0736;MC=SI_BD_2149,BI_GS_DEL1_B4_P0373_16;NS=2504;SAS_AF=0.1329;SVTYPE=DEL\tGT\t0|1\n2\t122623755\tDEL_pindel_4605\tAGCATAAGCATTGTGTTTTCTCGACCAGAGAAATCTATGTTAAAGGCTTGCTTCT\tA\t.\tPASS\tAC=2038;AF=0.406949;AFR_AF=0.2489;AMR_AF=0.3991;AN=5008;CS=DEL_pindel;EAS_AF=0.2768;END=122623809;EUR_AF=0.5944;NS=2504;SAS_AF=0.5675;SITEPOST=0.9998;SVTYPE=DEL\tGT\t1|1\n2\t123330661\tALU_umary_ALU_1484\tA\t<INS:ME:ALU>\t.\t.\tAC=2231;AF=0.445487;AFR_AF=0.4834;AMR_AF=0.4006;AN=5008;CS=ALU_umary;EAS_AF=0.4921;EUR_AF=0.502;MEINFO=AluYa5,1,281,+;NS=2504;SAS_AF=0.32;SITEPOST=1;SVLEN=280;SVTYPE=ALU;TSD=AAGAAAAATCCACTGA\tGT\t0|1\n2\t123364885\tUW_VH_202\tA\t<CN0>\t100\tPASS\tAC=2077;AF=0.414736;AFR_AF=0.1256;AMR_AF=0.4092;AN=5008;CIEND=0,483;CIPOS=-548,0;CS=DEL_union;EAS_AF=0.6389;END=123365367;EUR_AF=0.6203;MC=BI_GS_DEL1_B3_P0374_13,SI_BD_2157;NS=2504;SAS_AF=0.3671;SVTYPE=DEL\tGT\t0|1\n2\t123476599\tCINV_delly_INV00060053\tG\t<INV>\t.\tPASS\tAC=834;AF=0.166534;AFR_AF=0.0598;AMR_AF=0.1124;AN=5008;CIEND=-56,56;CIPOS=-56,56;CS=CINV_delly;EAS_AF=0.3562;END=123482503;EUR_AF=0.1173;IMPRECISE;NS=2504;SAS_AF=0.2045;SVTYPE=INV\tGT\t1|0\n2\t123477289\tBI_GS_CNV_2_123477289_123482545\tA\t<CN0>\t100\tPASS\tAC=832;AF=0.166134;AFR_AF=0.059;AMR_AF=0.1124;AN=5008;CIEND=0,500;CIPOS=-500,0;CS=DEL_union;EAS_AF=0.3552;END=123482545;EUR_AF=0.1173;NS=2504;SAS_AF=0.2045;SVTYPE=DEL\tGT\t1|0\n2\t124054928\tALU_umary_ALU_1489\tT\t<INS:ME:ALU>\t.\t.\tAC=812;AF=0.162141;AFR_AF=0.1369;AMR_AF=0.2161;AN=5008;CS=ALU_umary;EAS_AF=0.0784;EUR_AF=0.2068;MEINFO=AluUndef,1,259,-;NS=2504;SAS_AF=0.1984;SITEPOST=1;SVLEN=258;SVTYPE=ALU;TSD=GAGCTTTATTTTT\tGT\t1|0\n2\t126368481\tBI_GS_DEL1_B3_P0377_16\tT\t<CN0>\t100\tPASS\tAC=255;AF=0.0509185;AFR_AF=0.0053;AMR_AF=0.0663;AN=5008;CIEND=0,1;CIPOS=0,1;CS=DEL_union;EAS_AF=0.001;END=126370218;EUR_AF=0.1302;MC=UW_VH_9397,EM_DL_DEL10558934,SI_BD_2174,UW_VH_1705;NS=2504;SAS_AF=0.0716;SVTYPE=DEL\tGT\t0|1\n2\t126443247\tEM_DL_DEL54293\tG\t<CN0>\t100\tPASS\tAC=3691;AF=0.737021;AFR_AF=0.6241;AMR_AF=0.7695;AN=5008;CIEND=-150,150;CIPOS=-150,150;CS=DEL_union;EAS_AF=0.8631;END=126451831;EUR_AF=0.6412;MC=BI_GS_DEL1_B1_P0377_340,YL_CN_MXL_432,UW_VH_10951,UW_VH_2653,UW_VH_22041,UW_VH_18622,SI_BD_2176;NS=2504;SAS_AF=0.8354;SVTYPE=DEL\tGT\t1|0\n2\t126641642\tALU_umary_ALU_1502\tT\t<INS:ME:ALU>\t.\t.\tAC=220;AF=0.0439297;AFR_AF=0.003;AMR_AF=0.0562;AN=5008;CS=ALU_umary;EAS_AF=0.002;EUR_AF=0.1362;MEINFO=AluYb8,8,277,+;NS=2504;SAS_AF=0.0389;SITEPOST=1;SVLEN=269;SVTYPE=ALU;TSD=AAGAAACTATT\tGT\t0|1\n2\t127674757\tUW_VH_5962\tT\t<CN0>\t100\tPASS\tAC=3385;AF=0.675919;AFR_AF=0.2799;AMR_AF=0.8271;AN=5008;CIEND=0,460;CIPOS=-434,0;CS=DEL_union;EAS_AF=0.8651;END=127677270;EUR_AF=0.835;MC=EM_DL_DEL54330,YL_CN_LWK_480,YL_CN_FIN_514,SI_BD_2187;NS=2504;SAS_AF=0.7454;SVTYPE=DEL\tGT\t1|0\n2\t131423474\tSI_BD_2228\tG\t<CN0>\t100\tPASS\tAC=315;AF=0.0628994;AFR_AF=0.053;AMR_AF=0.0706;AN=5008;CIEND=-50,51;CIPOS=-51,50;CS=DEL_union;EAS_AF=0.0069;END=131426399;EUR_AF=0.1451;NS=2504;SAS_AF=0.044;SVTYPE=DEL\tGT\t1|1\n2\t131424936\tYL_CN_GBR_529\tG\t<CN0>\t100\tPASS\tAC=327;AF=0.0652955;AFR_AF=0.0605;AMR_AF=0.072;AN=5008;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0.0069;END=131428361;EUR_AF=0.1461;MC=YL_CN_FIN_525;NS=2504;SAS_AF=0.044;SVTYPE=DEL\tGT\t1|1\n2\t131463320\tBI_GS_DEL1_B4_P0382_37\tT\t<CN0>\t100\tPASS\tAC=17;AF=0.00339457;AFR_AF=0.0015;AMR_AF=0.0043;AN=5008;CIEND=-56,56;CIPOS=-56,56;CS=DEL_union;EAS_AF=0;END=131475704;EUR_AF=0.0109;MC=YL_CN_YRI_713;NS=2504;SAS_AF=0.001;SVTYPE=DEL\tGT\t1|0\n2\t132335225\tDEL_pindel_4748\tAGCGCTTCTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGTCGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGT\tA\t.\tPASS\tAC=3540;AF=0.706869;AFR_AF=0.6218;AMR_AF=0.7378;AN=5008;CS=DEL_pindel;EAS_AF=0.7788;END=132335331;EUR_AF=0.7147;MEINFO=AluYb,213,281,-;NS=2504;SAS_AF=0.7178;SITEPOST=0.9008;SVTYPE=DEL_ALU\tGT\t1|1\n2\t139380788\tALU_umary_ALU_1564\tG\t<INS:ME:ALU>\t.\t.\tAC=584;AF=0.116613;AFR_AF=0.0182;AMR_AF=0.1369;AN=5008;CS=ALU_umary;EAS_AF=0.1429;EUR_AF=0.1799;MEINFO=AluUndef,12,281,+;NS=2504;SAS_AF=0.1431;SITEPOST=1;SVLEN=269;SVTYPE=ALU;TSD=AACAACAGCTCTG\tGT\t0|1\n2\t143434605\tDEL_pindel_4970\tTCAAAGCTTTCATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTGTCGCCCAGGCTGGAGTGCAGTGGCGCAATCTCGGCTCACTGCAGGCTCCGCCCCCTGGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCTACCACGCCCGGCTAATTTTTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGC\tT\t.\tPASS\tAC=2870;AF=0.573083;AFR_AF=0.7103;AMR_AF=0.5115;AN=5008;CS=DEL_pindel;EAS_AF=0.5466;END=143434943;EUR_AF=0.4324;MEINFO=AluYc1,2,281,-;NS=2504;SAS_AF=0.6033;SITEPOST=0.9913;SVTYPE=DEL_ALU\tGT\t0|1\n2\t144010793\tL1_umary_LINE1_410\tA\t<INS:ME:LINE1>\t.\t.\tAC=751;AF=0.14996;AFR_AF=0.0855;AMR_AF=0.1614;AN=5008;CS=L1_umary;EAS_AF=0.1409;EUR_AF=0.1879;MEINFO=LINE1,1,5969,+;NS=2504;SAS_AF=0.1994;SITEPOST=1;SVLEN=5968;SVTYPE=LINE1;TSD=AAAAAGTTTGATGGA\tGT\t1|0\n2\t145346767\tALU_umary_ALU_1610\tA\t<INS:ME:ALU>\t.\t.\tAC=1648;AF=0.329073;AFR_AF=0.3805;AMR_AF=0.3127;AN=5008;CS=ALU_umary;EAS_AF=0.3393;EUR_AF=0.3141;MEINFO=AluUndef,2,276,+;NS=2504;SAS_AF=0.2761;SITEPOST=1;SVLEN=274;SVTYPE=ALU;TSD=AATAAATATTTACAA\tGT\t1|0\n2\t146842402\tDEL_pindel_5051\tCGATTCCTCAAGGATCTAGAACCAGAAAAACCATTTGACTCAGCAATCCCATTTCTGGGTATGTACCCAAAGGATTATAAATCATGCTACTATAAAGACACATGAATATGTATGTTTATTGTGGCACTATTCACAACAGCAAAGACTT\tC\t.\tPASS\tAC=1801;AF=0.359625;AFR_AF=0.0968;AMR_AF=0.3847;AN=5008;CS=DEL_pindel;EAS_AF=0.626;END=146842549;EUR_AF=0.4245;NS=2504;SAS_AF=0.3558;SITEPOST=0.9999;SVTYPE=DEL\tGT\t1|1\n2\t146862622\tBI_GS_DEL1_B1_P0397_730\tA\t<CN0>\t100\tPASS\tAC=1822;AF=0.363818;AFR_AF=0.0862;AMR_AF=0.3948;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.6488;END=146876866;EUR_AF=0.4245;MC=EM_DL_DEL54907,YL_CN_CEU_683,UW_VH_7319;NS=2504;SAS_AF=0.3609;SVTYPE=DEL\tGT\t1|1\n2\t146868295\tUW_VH_12564\tT\t<CN0>\t100\tPASS\tAC=1823;AF=0.364018;AFR_AF=0.0862;AMR_AF=0.3963;AN=5008;CIEND=0,87;CIPOS=-74,0;CS=DEL_union;EAS_AF=0.6488;END=146876318;EUR_AF=0.4245;MC=BI_GS_DEL1_B2_P0397_573;NS=2504;SAS_AF=0.3609;SVTYPE=DEL\tGT\t1|1\n2\t147020933\tL1_umary_LINE1_411\tT\t<INS:ME:LINE1>\t.\t.\tAC=3464;AF=0.691693;AFR_AF=0.3835;AMR_AF=0.7579;AN=5008;CS=L1_umary;EAS_AF=0.8373;EUR_AF=0.8082;MEINFO=LINE1,4568,6016,+;NS=2504;SAS_AF=0.7914;SITEPOST=1;SVLEN=1448;SVTYPE=LINE1;TSD=AGAAATACT\tGT\t1|0\n2\t148650072\tALU_umary_ALU_1623\tT\t<INS:ME:ALU>\t.\t.\tAC=896;AF=0.178914;AFR_AF=0.1157;AMR_AF=0.2219;AN=5008;CS=ALU_umary;EAS_AF=0.2669;EUR_AF=0.1839;MEINFO=AluYb9,17,278,-;NS=2504;SAS_AF=0.138;SITEPOST=1;SVLEN=261;SVTYPE=ALU;TSD=AACTTTTTT\tGT\t0|1\n2\t150759300\tDEL_pindel_5133\tCAAACAAGCAGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAAATTAGCCGGGCGTGGTAGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCGCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA\tC\t.\tPASS\tAC=2602;AF=0.519569;AFR_AF=0.3684;AMR_AF=0.5605;AN=5008;CS=DEL_pindel;EAS_AF=0.6677;END=150759621;EUR_AF=0.5388;MEINFO=AluYc1,1,281,+;NS=2504;SAS_AF=0.5225;SITEPOST=0.9917;SVTYPE=DEL_ALU\tGT\t1|0\n2\t151903083\tDEL_pindel_5163\tTAAACAATTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCACCCCGGCTAAAATGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAA\tT\t.\tPASS\tAC=4565;AF=0.911542;AFR_AF=0.733;AMR_AF=0.9553;AN=5008;CS=DEL_pindel;EAS_AF=0.9762;END=151903359;EUR_AF=0.9881;MEINFO=AluY,39,281,+;NS=2504;SAS_AF=0.9765;SITEPOST=1;SVTYPE=DEL_ALU\tGT\t1|1\n2\t152041204\tDEL_pindel_5164\tTTAAGCATAATATTGGCAAAGCATGATTTTTTCCTTGACAAGGATGAATTGCTCAATATAAACCCTGGGAAGAACTAATATGAACAAAGAAAAAAAATAAAGAGAATCCAGAATAAGGTAGTTTCTGAATATCAGATATTACAGAGCAAAGGAAAAATACCATAAAATATTTCGTGCATGATAAAACCTTGCTTATTCAAATTTTTGGTACATAAGAATGGCACATATACCGCAAAATAGAAGGTGATTAAGAAATAAGTTATTTCATTTTAGAGGGTAGTCACACATA\tT\t.\tPASS\tAC=1378;AF=0.27516;AFR_AF=0.0461;AMR_AF=0.4193;AN=5008;CS=DEL_pindel;EAS_AF=0.3581;END=152041492;EUR_AF=0.3976;NS=2504;SAS_AF=0.271;SITEPOST=0.998;SVTYPE=DEL\tGT\t1|1\n2\t153153401\tDEL_pindel_5178\tTATGTTTCTCTGTTGAAAGAAATGCTATGCCTTTGTGAAAATTGCCATTCTGTAAAAGTACTACTGAAGAATAGGACTCTGCTAAGGA\tT\t.\tPASS\tAC=2265;AF=0.452276;AFR_AF=0.2716;AMR_AF=0.3602;AN=5008;CS=DEL_pindel;EAS_AF=0.8433;END=153153488;EUR_AF=0.2942;NS=2504;SAS_AF=0.5215;SITEPOST=0.9996;SVTYPE=DEL\tGT\t1|0\n2\t154064575\tDEL_pindel_5203\tATTTTTTTTTTTTTTTTTTTAAAAGGACATGAGGATGATTTATTTGGCAGTCAGATCTTAAGAGGGCAGCAGAACTAGCAAATGGCCAACCCTGAGCCCAAATG\tA\t.\tPASS\tAC=3062;AF=0.611422;AFR_AF=0.7784;AMR_AF=0.5893;AN=5008;CS=DEL_pindel;EAS_AF=0.3462;END=154064678;EUR_AF=0.7276;NS=2504;SAS_AF=0.5552;SITEPOST=0.986;SVTYPE=DEL\tGT\t0|1\n2\t154160685\tALU_umary_ALU_1647\tT\t<INS:ME:ALU>\t.\t.\tAC=979;AF=0.195487;AFR_AF=0.2496;AMR_AF=0.1556;AN=5008;CS=ALU_umary;EAS_AF=0.1171;EUR_AF=0.2435;MEINFO=AluYa5,2,281,-;NS=2504;SAS_AF=0.182;SITEPOST=1;SVLEN=279;SVTYPE=ALU;TSD=CACTGTTCTGTTTTT\tGT\t0|1\n2\t154494940\tBI_GS_DEL1_B4_P0405_123\tC\t<CN0>\t100\tPASS\tAC=3532;AF=0.705272;AFR_AF=0.4992;AMR_AF=0.7334;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.9315;END=154495150;EUR_AF=0.7207;NS=2504;SAS_AF=0.7147;SVTYPE=DEL\tGT\t1|1\n2\t156750284\tDEL_pindel_5254\tTCTAACAAAGTTAGTGGCTTTGTGGCTAACTTTGTAACTAACTAACAAAGTTAGTGGCTAACAAGTGTTAGTGGCTTTCACTAACA\tT\t.\tPASS\tAC=1013;AF=0.202276;AFR_AF=0.3026;AMR_AF=0.1383;AN=5008;CS=DEL_pindel;EAS_AF=0.2163;END=156750369;EUR_AF=0.1491;NS=2504;SAS_AF=0.1524;SITEPOST=0.9995;SVTYPE=DEL\tGT\t1|0\n2\t156833715\tUW_VH_1709\tC\t<CN0>\t100\tPASS\tAC=81;AF=0.0161741;AFR_AF=0.0015;AMR_AF=0.0216;AN=5008;CIEND=0,349;CIPOS=-339,0;CS=DEL_union;EAS_AF=0;END=156835494;EUR_AF=0.0527;MC=BI_GS_DEL1_B3_P0407_32,EM_DL_DEL10570970;NS=2504;SAS_AF=0.0112;SVTYPE=DEL\tGT\t0|1\n2\t158433337\tDEL_pindel_5271\tTTGAAATTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCCGGACTGCGGACTGCAGTGGCACAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCCAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTGTATTTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC\tT\t.\tPASS\tAC=1864;AF=0.372204;AFR_AF=0.4758;AMR_AF=0.3991;AN=5008;CS=DEL_pindel;EAS_AF=0.2817;END=158433666;EUR_AF=0.4026;MEINFO=AluYb6_2,1,281,-;NS=2504;SAS_AF=0.2751;SITEPOST=0.9988;SVTYPE=DEL_ALU\tGT\t0|1\n2\t158719085\tDEL_pindel_5275\tTGAAAAGGTAACTACTGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCAGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAA\tT\t.\tPASS\tAC=3698;AF=0.738419;AFR_AF=0.6725;AMR_AF=0.7334;AN=5008;CS=DEL_pindel;EAS_AF=0.7609;END=158719396;EUR_AF=0.7694;MEINFO=AluYa5,1,281,+;NS=2504;SAS_AF=0.7761;SITEPOST=0.9381;SVTYPE=DEL_ALU\tGT\t1|1\n2\t159285147\tALU_umary_ALU_1679\tA\t<INS:ME:ALU>\t.\t.\tAC=510;AF=0.101837;AFR_AF=0.112;AMR_AF=0.1037;AN=5008;CS=ALU_umary;EAS_AF=0.0218;EUR_AF=0.164;MEINFO=AluUndef,1,280,-;NS=2504;SAS_AF=0.1053;SITEPOST=1;SVLEN=279;SVTYPE=ALU;TSD=AAAAAGTCAGGAAACA\tGT\t1|0\n2\t159661933\tUW_VH_2194\tC\t<CN0>\t100\tPASS\tAC=336;AF=0.0670926;AFR_AF=0.0492;AMR_AF=0.1023;AN=5008;CIEND=0,344;CIPOS=-320,0;CS=DEL_union;EAS_AF=0;END=159662894;EUR_AF=0.1571;MC=BI_GS_DEL1_B4_P0410_166,EM_DL_DEL10572094;NS=2504;SAS_AF=0.0429;SVTYPE=DEL\tGT\t1|0\n2\t159958908\tYL_CN_MXL_460\tC\t<CN0>\t100\tPASS\tAC=2315;AF=0.46226;AFR_AF=0.2663;AMR_AF=0.5519;AN=5008;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0.3621;END=159961502;EUR_AF=0.663;MC=EM_DL_DEL55175,UW_VH_23902;NS=2504;SAS_AF=0.5603;SVTYPE=DEL\tGT\t1|1\n2\t160855851\tDEL_pindel_5321\tTTACGTAATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTCTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCACGCCCGGCC\tT\t.\tPASS\tAC=3564;AF=0.711661;AFR_AF=0.7791;AMR_AF=0.7305;AN=5008;CS=DEL_pindel;EAS_AF=0.7312;END=160856174;EUR_AF=0.7137;MEINFO=AluYa5,1,281,-;NS=2504;SAS_AF=0.5849;SITEPOST=0.98995;SVTYPE=DEL_ALU\tGT\t1|1\n2\t161795600\tDEL_pindel_5339\tAGAAGATTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC\tA\t.\tPASS\tAC=4708;AF=0.940096;AFR_AF=0.9349;AMR_AF=0.9524;AN=5008;CS=DEL_pindel;EAS_AF=0.9286;END=161795924;EUR_AF=0.9463;MEINFO=AluYa4b,1,281,-;NS=2504;SAS_AF=0.9438;SITEPOST=1;SVTYPE=DEL_ALU\tGT\t1|1\n2\t161952337\tALU_umary_ALU_1695\tC\t<INS:ME:ALU>\t.\t.\tAC=2556;AF=0.510383;AFR_AF=0.5197;AMR_AF=0.5014;AN=5008;CS=ALU_umary;EAS_AF=0.5198;EUR_AF=0.5159;MEINFO=AluUndef,2,211,-;NS=2504;SAS_AF=0.4888;SITEPOST=1;SVLEN=209;SVTYPE=ALU;TSD=AAAAAAAAAAAAAAAATAGGC\tGT\t1|0\n2\t162332269\tBI_GS_DEL1_B1_P0413_257\tC\t<CN0>\t100\tPASS\tAC=3757;AF=0.7502;AFR_AF=0.5484;AMR_AF=0.8501;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.8413;END=162334045;EUR_AF=0.7972;MC=YL_CN_CHB_595,YL_CN_FIN_545,YL_CN_GIH_423,YL_CN_JPT_617,EM_DL_DEL10573389,YL_CN_PEL_527,YL_CN_CEU_699,YL_CN_ASW_601,YL_CN_GWD_787,YL_CN_STU_548,YL_CN_CDX_506,SI_BD_2368,YL_CN_MXL_462,YL_CN_BEB_464,YL_CN_ITU_560,YL_CN_PJL_608,YL_CN_LWK_530,YL_CN_TSI_520;NS=2504;SAS_AF=0.8098;SVTYPE=DEL\tGT\t1|1\n2\t163666408\tDEL_pindel_5363\tTCTCACCTATTCTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGCAATCTCAGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCACGCCCAGCTAATTTTTTGTATTTTTAGTAGAGACAGGGTTTCACCATGTTAGCCAGGATGGTCTGGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGC\tT\t.\tPASS\tAC=2780;AF=0.555112;AFR_AF=0.4667;AMR_AF=0.5692;AN=5008;CS=DEL_pindel;EAS_AF=0.5288;END=163666723;EUR_AF=0.5437;MEINFO=AluY,2,281,-;NS=2504;SAS_AF=0.7035;SITEPOST=0.98975;SVTYPE=DEL_ALU\tGT\t1|0\n2\t163678631\tALU_umary_ALU_1709\tT\t<INS:ME:ALU>\t.\t.\tAC=1956;AF=0.390575;AFR_AF=0.1982;AMR_AF=0.3718;AN=5008;CS=ALU_umary;EAS_AF=0.4464;EUR_AF=0.4364;MEINFO=AluYa4_1,1,281,-;NS=2504;SAS_AF=0.5593;SITEPOST=1;SVLEN=280;SVTYPE=ALU;TSD=AAATTTTACATTTT\tGT\t1|0\n2\t167545980\tBI_GS_DEL1_B1_P0418_424\tA\t<CN0>\t100\tPASS\tAC=2312;AF=0.461661;AFR_AF=0.1884;AMR_AF=0.6844;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.5367;END=167547056;EUR_AF=0.6412;MC=SI_BD_2389;NS=2504;SAS_AF=0.411;SVTYPE=DEL\tGT\t1|1\n2\t167550210\tDEL_pindel_5420\tCCAGGGTGGGTGTACACCTCCGGCTATATGGGGAGTAATATCATCCTCTCCCTTCCTGGATATTAGAAACAATTTCA\tC\t.\tPASS\tAC=2219;AF=0.443091;AFR_AF=0.1929;AMR_AF=0.6225;AN=5008;CS=DEL_pindel;EAS_AF=0.5437;END=167550286;EUR_AF=0.5596;NS=2504;SAS_AF=0.4305;SITEPOST=0.92225;SVTYPE=DEL\tGT\t1|1\n2\t169395462\tDEL_pindel_5443\tGGAAAATATTGTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTCTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC\tG\t.\tPASS\tAC=3349;AF=0.66873;AFR_AF=0.5923;AMR_AF=0.6988;AN=5008;CS=DEL_pindel;EAS_AF=0.6885;END=169395774;EUR_AF=0.7038;MEINFO=AluYa5,1,281,-;NS=2504;SAS_AF=0.6943;SITEPOST=0.9594;SVTYPE=DEL_ALU\tGT\t0|1\n2\t169606131\tDEL_pindel_5451\tAGAATATGGTAGCGTGCGCTACCATGCCTAGCTAATTTTTTATTTTTTGTAGAGACGGGGTCTTGCTGTGATACCTC\tA\t.\tPASS\tAC=3406;AF=0.680112;AFR_AF=0.848;AMR_AF=0.7853;AN=5008;CS=DEL_pindel;EAS_AF=0.4921;END=169606207;EUR_AF=0.6809;NS=2504;SAS_AF=0.5716;SITEPOST=0.9999;SVTYPE=DEL\tGT\t1|1\n2\t173522171\tALU_umary_ALU_1756\tT\t<INS:ME:ALU>\t.\t.\tAC=1210;AF=0.241613;AFR_AF=0.2118;AMR_AF=0.2709;AN=5008;CS=ALU_umary;EAS_AF=0.1319;EUR_AF=0.3787;MEINFO=AluUndef,172,281,-;NS=2504;SAS_AF=0.2331;SITEPOST=1;SVLEN=109;SVTYPE=ALU;TSD=TCGATACTGCTTTT\tGT\t1|0\n2\t175090625\tDEL_pindel_5552\tTGAAAATGAGCTTCTCGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAAGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAAAAAATACAAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAA\tT\t.\tPASS\tAC=2582;AF=0.515575;AFR_AF=0.3805;AMR_AF=0.4352;AN=5008;CS=DEL_pindel;EAS_AF=0.7202;END=175090945;EUR_AF=0.4453;MEINFO=AluYa5,1,281,+;NS=2504;SAS_AF=0.6166;SITEPOST=0.99115;SVTYPE=DEL_ALU\tGT\t0|1\n2\t177265639\tUW_VH_21077\tA\t<CN0>\t100\tPASS\tAC=3367;AF=0.672324;AFR_AF=0.4917;AMR_AF=0.8674;AN=5008;CIEND=0,408;CIPOS=-475,0;CS=DEL_union;EAS_AF=0.6528;END=177272040;EUR_AF=0.828;MC=UW_VH_22300,UW_VH_11200,UW_VH_5386,UW_VH_1970,UW_VH_10973,UW_VH_3870,UW_VH_22780,UW_VH_5963,UW_VH_20495,UW_VH_2654,UW_VH_12492,SI_BD_2429,UW_VH_24782,YL_CN_ESN_630,EM_DL_DEL55532;NS=2504;SAS_AF=0.638;SVTYPE=DEL\tGT\t1|1\n2\t178287642\tBI_GS_DEL1_B3_P0429_15\tG\t<CN0>\t100\tPASS\tAC=3324;AF=0.663738;AFR_AF=0.5151;AMR_AF=0.7896;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.6399;END=178288052;EUR_AF=0.7525;MC=UW_VH_230,SI_BD_2437;NS=2504;SAS_AF=0.7086;SVTYPE=DEL\tGT\t1|1\n2\t178351472\tALU_umary_ALU_1785\tT\t<INS:ME:ALU>\t.\t.\tAC=2131;AF=0.425519;AFR_AF=0.2186;AMR_AF=0.5245;AN=5008;CS=ALU_umary;EAS_AF=0.4732;EUR_AF=0.5258;MEINFO=AluYb6_2,2,281,-;NS=2504;SAS_AF=0.4826;SITEPOST=1;SVLEN=279;SVTYPE=ALU;TSD=CTATATGTATATTTTTAT\tGT\t0|1\n2\t178648956\tALU_umary_ALU_1789\tA\t<INS:ME:ALU>\t.\t.\tAC=1431;AF=0.285743;AFR_AF=0.351;AMR_AF=0.1787;AN=5008;CS=ALU_umary;EAS_AF=0.3204;EUR_AF=0.2833;MEINFO=AluYc1,2,281,+;NS=2504;SAS_AF=0.2403;SITEPOST=1;SVLEN=279;SVTYPE=ALU;TSD=AAACAGGATGTGGTA\tGT\t0|1\n2\t181000555\tL1_umary_LINE1_457\tC\t<INS:ME:LINE1>\t.\t.\tAC=920;AF=0.183706;AFR_AF=0.1717;AMR_AF=0.2795;AN=5008;CS=L1_umary;EAS_AF=0.1448;EUR_AF=0.169;MEINFO=LINE1,4479,5965,+;NS=2504;SAS_AF=0.1871;SITEPOST=1;SVLEN=1486;SVTYPE=LINE1;TSD=AGAAAATATAGGTCTC\tGT\t0|1\n2\t181925827\tDEL_pindel_5663\tAGACCACTTCTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCCGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCTTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC\tA\t.\tPASS\tAC=3659;AF=0.730631;AFR_AF=0.7542;AMR_AF=0.7248;AN=5008;CS=DEL_pindel;EAS_AF=0.7718;END=181926149;EUR_AF=0.6531;MEINFO=AluYb6_2,1,281,-;NS=2504;SAS_AF=0.7403;SITEPOST=0.9837;SVTYPE=DEL_ALU\tGT\t1|1\n2\t182262200\tALU_umary_ALU_1807\tG\t<INS:ME:ALU>\t.\t.\tAC=668;AF=0.133387;AFR_AF=0.0098;AMR_AF=0.1268;AN=5008;CS=ALU_umary;EAS_AF=0.1022;EUR_AF=0.2495;MEINFO=AluYc1,9,281,+;NS=2504;SAS_AF=0.2178;SITEPOST=1;SVLEN=272;SVTYPE=ALU;TSD=AACAAGAAGGAATACAGAG\tGT\t0|1\n2\t182355971\tDEL_pindel_5673\tTAAGAATTACATCGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGACGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACACGGTGAAACCCCGTCTCTACTAAAAATACAAAAATTAGCCGGGCATGGTGGCGCGCGCCTGTAGTCCCAGCTACAAGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGTCGAGATCGCGCCACTGCACTCCAGCCTGGGCGACAGAGCTAAACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAA\tT\t.\tPASS\tAC=4283;AF=0.855232;AFR_AF=0.8238;AMR_AF=0.866;AN=5008;CS=DEL_pindel;EAS_AF=0.8681;END=182356286;EUR_AF=0.8748;MEINFO=AluYg6,2,281,+;NS=2504;SAS_AF=0.8569;SITEPOST=0.9852;SVTYPE=DEL_ALU\tGT\t1|1\n2\t183315806\tDEL_pindel_5685\tTAAAAATATTTTAACTAGGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAAGTCAGGAGATCGAGACCATCCCGGCTAACACGGTGAAACCCTGTCTCTACTAAAAATACAAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAA\tT\t.\tPASS\tAC=2927;AF=0.584465;AFR_AF=0.5424;AMR_AF=0.5043;AN=5008;CS=DEL_pindel;EAS_AF=0.7163;END=183316121;EUR_AF=0.5318;MEINFO=AluYa4_1,1,281,+;NS=2504;SAS_AF=0.6166;SITEPOST=0.9754;SVTYPE=DEL_ALU\tGT\t1|0\n2\t183354710\tDEL_pindel_5686\tTGTGTAAAAATAAGGAGAAATCATCAAAGAAAACTGAGAAGGAGTAGCCAATGAAATAGATGGAGAACCAATAAA\tT\t.\tPASS\tAC=2064;AF=0.412141;AFR_AF=0.5257;AMR_AF=0.3055;AN=5008;CS=DEL_pindel;EAS_AF=0.3423;END=183354784;EUR_AF=0.3926;NS=2504;SAS_AF=0.4264;SITEPOST=0.9998;SVTYPE=DEL\tGT\t1|0\n2\t188215718\tDEL_pindel_5748\tTAAGAAATATGTTGGCTGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACAAGGTCAGGAGATCGAGACCATCTTGGCTAACACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGCGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCTGGGAGGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAATCCGGCCTGGGCTAAACAGCGGGACTCCGTCTCAAAAAAAAAAAAAA\tT\t.\tPASS\tAC=3426;AF=0.684105;AFR_AF=0.7421;AMR_AF=0.6542;AN=5008;CS=DEL_pindel;EAS_AF=0.6369;END=188216025;EUR_AF=0.7127;MEINFO=AluYb,1,281,+;NS=2504;SAS_AF=0.6462;SITEPOST=0.9809;SVTYPE=DEL_ALU\tGT\t1|1\n2\t189119663\tUW_VH_236\tA\t<CN0>\t100\tPASS\tAC=1364;AF=0.272364;AFR_AF=0.3805;AMR_AF=0.1527;AN=5008;CIEND=0,525;CIPOS=-547,0;CS=DEL_union;EAS_AF=0.248;END=189120979;EUR_AF=0.2107;MC=YL_CN_BEB_487,BI_GS_DEL1_B1_P0440_75,YL_CN_TSI_544;NS=2504;SAS_AF=0.2996;SVTYPE=DEL\tGT\t1|0\n2\t189959434\tALU_umary_ALU_1847\tA\t<INS:ME:ALU>\t.\t.\tAC=2374;AF=0.474042;AFR_AF=0.3744;AMR_AF=0.4193;AN=5008;CS=ALU_umary;EAS_AF=0.4821;EUR_AF=0.6004;MEINFO=AluUndef,1,281,+;NS=2504;SAS_AF=0.5092;SITEPOST=1;SVLEN=280;SVTYPE=ALU;TSD=AAGAAACATACCA\tGT\t0|1\n2\t191635470\tDEL_pindel_5812\tGATGTGCATGATGCTTATCTATGGGATGTCCCTCGAGCATGCAGGCACTGCTGC\tG\t.\tPASS\tAC=2352;AF=0.469649;AFR_AF=0.593;AMR_AF=0.3401;AN=5008;CS=DEL_pindel;EAS_AF=0.3502;END=191635523;EUR_AF=0.4483;NS=2504;SAS_AF=0.5399;SITEPOST=0.9999;SVTYPE=DEL\tGT\t1|1\n2\t191680779\tDEL_pindel_5817\tAGGAACTCTCTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGC\tA\t.\tPASS\tAC=4129;AF=0.824481;AFR_AF=0.7874;AMR_AF=0.879;AN=5008;CS=DEL_pindel;EAS_AF=0.8482;END=191680874;EUR_AF=0.8231;NS=2504;SAS_AF=0.8129;SITEPOST=0.9803;SVTYPE=DEL\tGT\t0|1\n2\t193355404\tDEL_pindel_5850\tACAAATCTTGATGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCACTCCAGCCTGGGCGACAGAGCAAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAG\tA\t.\tPASS\tAC=4110;AF=0.820687;AFR_AF=0.7723;AMR_AF=0.8516;AN=5008;CS=DEL_pindel;EAS_AF=0.8423;END=193355708;EUR_AF=0.836;MEINFO=AluYa4_5,11,281,+;NS=2504;SAS_AF=0.8262;SITEPOST=0.9726;SVTYPE=DEL_ALU\tGT\t0|1\n2\t194689469\tSI_BD_2516\tT\t<CN0>\t100\tPASS\tAC=4218;AF=0.842252;AFR_AF=0.6573;AMR_AF=0.915;AN=5008;CIEND=-50,266;CIPOS=-266,50;CS=DEL_union;EAS_AF=0.9147;END=194698782;EUR_AF=0.9056;MC=EM_DL_DEL56116,YL_CN_ASW_636;NS=2504;SAS_AF=0.9008;SVTYPE=DEL\tGT\t1|1\n2\t195477627\tDEL_pindel_5902\tTTGGATGTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCTCTCTGTCGCCCAGGCCGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCAC\tT\t.\tPASS\tAC=1189;AF=0.23742;AFR_AF=0.1899;AMR_AF=0.3386;AN=5008;CS=DEL_pindel;EAS_AF=0.1567;END=195477734;EUR_AF=0.2167;MEINFO=AluYb,212,281,-;NS=2504;SAS_AF=0.3344;SITEPOST=0.9997;SVTYPE=DEL_ALU\tGT\t0|1\n2\t196031309\tDEL_pindel_5915\tGGAAAAGTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTGTCGCCCAGGCTGGAGTGCAGTGGCGCAATCTCGGCTCACTGCAGGCTCCGCCCCCTGGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCTCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC\tG\t.\tPASS\tAC=4065;AF=0.811701;AFR_AF=0.7557;AMR_AF=0.8271;AN=5008;CS=DEL_pindel;EAS_AF=0.8284;END=196031614;EUR_AF=0.841;MEINFO=AluYe,1,281,-;NS=2504;SAS_AF=0.8292;SITEPOST=0.9883;SVTYPE=DEL_ALU\tGT\t1|1\n2\t196051814\tDEL_pindel_5916\tTAAAAAATAGGTTGGCTGCGCATATTCTCACTCATAGGTGGGAATTGAACAATGAGATCACATGGACACAGCAAGGGGAATATCACACTCGGGGGACTGTGGTGGGGTCGGGGGAGGGGGGAGGGATAGCATTGGGAGATATACCTAATGCTAGATGACACGTTAGTGGGTGCAGCGCACCAGCATGGCACATGTATACTTATGTAACTAGCCTGCACAATGTGCACATGTACCCTAAAACTTAGAGTATAATAAAAAAAAAAACATTAAA\tT\t.\tPASS\tAC=3236;AF=0.646166;AFR_AF=0.6467;AMR_AF=0.6441;AN=5008;CS=DEL_pindel;EAS_AF=0.628;END=196052084;EUR_AF=0.671;MEINFO=LINE1,5094,5124,+;NS=2504;SAS_AF=0.6401;SITEPOST=0.9698;SVTYPE=DEL_LINE1\tGT\t1|1\n2\t196214818\tBI_GS_DEL1_B1_P0447_186\tT\t<CN0>\t100\tPASS\tAC=3568;AF=0.71246;AFR_AF=0.6573;AMR_AF=0.696;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.5952;END=196215228;EUR_AF=0.8718;MC=DEL_pindel_5925;NS=2504;SAS_AF=0.7556;SVTYPE=DEL\tGT\t1|1\n2\t198758284\tDUP_gs_CNV_2_198758284_198761579\tG\t<CN0>,<CN2>\t.\tPASS\tAC=41,1;AF=0.0081869,0.00019968;AFR_AF=0.0008,0.0008;AMR_AF=0.0115,0;AN=5008;CS=DUP_gs;EAS_AF=0,0;END=198761579;EUR_AF=0.0318,0;MC=YL_CN_TSI_554,BI_GS_DEL1_B2_P0449_485,UW_VH_3346;NS=2504;SAS_AF=0,0;SITEPOST=0.9999;SVTYPE=CNV\tGT\t0|1\n2\t198894512\tDEL_pindel_5972\tTCTCCTGGATTCAAGTGATTCTCCTGCTTCAGTTTCCTGAGTAGCTGGGATTACAGGCATGCATCACCATGCCCAGCTAATTTTGTATTTTCAGTAGAGACGGGGTTTCACCATGTTGCCTAGGCTGATCTTGAATGC\tT\t.\tPASS\tAC=728;AF=0.145367;AFR_AF=0.1263;AMR_AF=0.1398;AN=5008;CS=DEL_pindel;EAS_AF=0.2113;END=198894649;EUR_AF=0.164;NS=2504;SAS_AF=0.0879;SITEPOST=0.9995;SVTYPE=DEL\tGT\t1|0\n2\t199779914\tL1_umary_LINE1_489\tT\t<INS:ME:LINE1>\t.\t.\tAC=152;AF=0.0303514;AFR_AF=0.0015;AMR_AF=0.0634;AN=5008;CS=L1_umary;EAS_AF=0.001;EUR_AF=0.0964;MEINFO=LINE1,10,5998,+;NS=2504;SAS_AF=0.0082;SITEPOST=1;SVLEN=5988;SVTYPE=LINE1;TSD=AGAAAGTATATAATCT\tGT\t1|0\n2\t200312454\tBI_GS_DEL1_B2_P0451_222\tA\t<CN0>\t100\tPASS\tAC=2100;AF=0.419329;AFR_AF=0.1838;AMR_AF=0.5418;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.3532;END=200312679;EUR_AF=0.6789;NS=2504;SAS_AF=0.4519;SVTYPE=DEL\tGT\t1|0\n2\t202721648\tDEL_pindel_6023\tTAAGATAACTGGGTTCCGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAATACAAAAAAAAATTAGCCGGGCGCGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCCGACCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAA\tT\t.\tPASS\tAC=1672;AF=0.333866;AFR_AF=0.5681;AMR_AF=0.2651;AN=5008;CS=DEL_pindel;EAS_AF=0.2153;END=202721969;EUR_AF=0.3161;MEINFO=AluYb6_2,1,281,+;NS=2504;SAS_AF=0.2065;SITEPOST=0.9988;SVTYPE=DEL_ALU\tGT\t1|0\n2\t206113734\tYL_CN_CEU_744\tT\t<CN0>\t100\tPASS\tAC=8;AF=0.00159744;AFR_AF=0.0008;AMR_AF=0;AN=5008;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0;END=206121786;EUR_AF=0.007;MC=BI_GS_DEL1_B5_P0457_136,UW_VH_2293;NS=2504;SAS_AF=0;SVTYPE=DEL\tGT\t0|1\n2\t206128030\tUW_VH_2809\tG\t<CN0>\t100\tPASS\tAC=183;AF=0.0365415;AFR_AF=0.0325;AMR_AF=0.0245;AN=5008;CIEND=0,260;CIPOS=-333,0;CS=DEL_union;EAS_AF=0.0407;END=206129895;EUR_AF=0.0527;MC=SI_BD_2570,YL_CN_PUR_722,BI_GS_DEL1_B1_P0457_116,EM_DL_DEL10589543;NS=2504;SAS_AF=0.0297;SVTYPE=DEL\tGT\t1|0\n2\t206731182\tDEL_pindel_6101\tCAAAAGAGACATTTCCTGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCGCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAA\tC\t.\tPASS\tAC=3618;AF=0.722444;AFR_AF=0.6543;AMR_AF=0.745;AN=5008;CS=DEL_pindel;EAS_AF=0.744;END=206731505;EUR_AF=0.7714;MEINFO=AluYa4_5,1,281,+;NS=2504;SAS_AF=0.726;SITEPOST=0.9705;SVTYPE=DEL_ALU\tGT\t1|1\n2\t208910336\tDEL_pindel_6133\tAATTTCCTTTATTTTTATTTTTATTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCAGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC\tA\t.\tPASS\tAC=1879;AF=0.3752;AFR_AF=0.4357;AMR_AF=0.3141;AN=5008;CS=DEL_pindel;EAS_AF=0.3919;END=208910651;EUR_AF=0.2356;MEINFO=AluYa5,1,281,-;NS=2504;SAS_AF=0.4632;SITEPOST=0.99835;SVTYPE=DEL_ALU\tGT\t1|0\n2\t208959107\tDEL_pindel_6136\tCGCCCAGTTAACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGGCGGAGTCTCGCTCTGTCGCCCAGGCCGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCTGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCG\tC\t.\tPASS\tAC=3545;AF=0.707867;AFR_AF=0.6838;AMR_AF=0.745;AN=5008;CS=DEL_pindel;EAS_AF=0.744;END=208959450;EUR_AF=0.6968;MEINFO=AluYb3a1,4,281,-;NS=2504;SAS_AF=0.6881;SITEPOST=0.9383;SVTYPE=DEL_ALU\tGT\t1|1\n2\t209061157\tDEL_pindel_6142\tTAGGAATTTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC\tT\t.\tPASS\tAC=3381;AF=0.67512;AFR_AF=0.4803;AMR_AF=0.7017;AN=5008;CS=DEL_pindel;EAS_AF=0.7867;END=209061477;EUR_AF=0.7286;MEINFO=AluYa5,1,281,-;NS=2504;SAS_AF=0.7495;SITEPOST=0.9779;SVTYPE=DEL_ALU\tGT\t1|1\n2\t209451717\tDEL_pindel_6154\tTGTTTGTTGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCAACGCCATTCTCCTGCCTCAGCCTCCCCAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC\tT\t.\tPASS\tAC=3073;AF=0.613618;AFR_AF=0.7035;AMR_AF=0.6744;AN=5008;CS=DEL_pindel;EAS_AF=0.4673;END=209452044;EUR_AF=0.6193;MEINFO=AluYb6_2,1,281,-;NS=2504;SAS_AF=0.5941;SITEPOST=0.9868;SVTYPE=DEL_ALU\tGT\t1|1\n2\t212161556\tDEL_pindel_6216\tATACATATGTATGTATGTATATACATACATATGTATGTATGTATATACATACATATGTATGTATG\tA\t.\tPASS\tAC=1479;AF=0.295327;AFR_AF=0.053;AMR_AF=0.2594;AN=5008;CS=DEL_pindel;EAS_AF=0.3284;END=212161620;EUR_AF=0.4165;NS=2504;SAS_AF=0.4898;SITEPOST=0.9986;SVTYPE=DEL\tGT\t0|1\n2\t212551245\tDEL_pindel_6224\tTGCCTCTAGATTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGATGGAGTCTCGCTCTGTCGCCCAGGTCGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCCGCCTCGGCCTCCCAAA\tT\t.\tPASS\tAC=4010;AF=0.800719;AFR_AF=0.7791;AMR_AF=0.7925;AN=5008;CS=DEL_pindel;EAS_AF=0.8304;END=212551542;EUR_AF=0.7982;MEINFO=AluYb6_2,38,281,-;NS=2504;SAS_AF=0.8078;SITEPOST=0.9598;SVTYPE=DEL_ALU\tGT\t0|1\n2\t214775204\tDEL_pindel_6267\tTAAGAATTCTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGCGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCTACCACGCCCGGCTAATTTTTTGTAGTTTTAGTAGAGACAGGGTTTCACCGTGTTAGCCAGAATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCACGCCCGGCC\tT\t.\tPASS\tAC=2519;AF=0.502995;AFR_AF=0.2761;AMR_AF=0.5432;AN=5008;CS=DEL_pindel;EAS_AF=0.5268;END=214775511;EUR_AF=0.5417;MEINFO=AluYc1,1,281,-;NS=2504;SAS_AF=0.7168;SITEPOST=0.9957;SVTYPE=DEL_ALU\tGT\t1|1\n2\t214778297\tDEL_pindel_6268\tATATATGTACATGTACATATATGTATATGTACATGTACATATATGTATATGTACATGTACATATATG\tA\t.\tPASS\tAC=2488;AF=0.496805;AFR_AF=0.4183;AMR_AF=0.5202;AN=5008;CS=DEL_pindel;EAS_AF=0.5397;END=214778363;EUR_AF=0.5139;NS=2504;SAS_AF=0.5245;SITEPOST=0.99945;SVTYPE=DEL\tGT\t0|1\n2\t215201641\tALU_umary_ALU_1973\tG\t<INS:ME:ALU>\t.\t.\tAC=2002;AF=0.39976;AFR_AF=0.112;AMR_AF=0.428;AN=5008;CS=ALU_umary;EAS_AF=0.4603;EUR_AF=0.5368;MEINFO=AluUndef,2,268,+;NS=2504;SAS_AF=0.5654;SITEPOST=1;SVLEN=266;SVTYPE=ALU;TSD=AAAGACTAAG\tGT\t0|1\n2\t215728762\tBI_GS_DEL1_B1_P0466_668\tT\t<CN0>\t100\tPASS\tAC=1629;AF=0.32528;AFR_AF=0.1853;AMR_AF=0.389;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.3373;END=215730832;EUR_AF=0.3936;MC=EM_DL_DEL56743,SI_BD_2624,YL_CN_ESN_659,UW_VH_252;NS=2504;SAS_AF=0.3865;SVTYPE=DEL\tGT\t0|1\n2\t216548435\tALU_umary_ALU_1978\tC\t<INS:ME:ALU>\t.\t.\tAC=921;AF=0.183906;AFR_AF=0.3109;AMR_AF=0.1628;AN=5008;CS=ALU_umary;EAS_AF=0.001;EUR_AF=0.2366;MEINFO=AluYb8,1,274,+;NS=2504;SAS_AF=0.1616;SITEPOST=1;SVLEN=273;SVTYPE=ALU;TSD=AAAAAATCAGTAAATTC\tGT\t0|1\n2\t217158346\tDEL_pindel_6321\tAAGCCAAACCCTCCAAACTATGTTTTTCATTTTCACAATAATTATTTTGTTCCTACAGTGCTTTTCTCCCTATAATTTTACTGGTATAAGACAAATGTACCTATTTCCTCTAACTGCCTCTAAATTTACTCAACCAGTACTAGAAAGAAGAACTTAGCCTCACAATAATTGAATTTAAATAACATCCAATTCTATGAAGTCAAACATGATCTGCATAATAAACAAACCAAGCTATATGGGGTCTGGCGGAAAAAAAGGTCACGTTTAATGTGTACATTTATAATCATATCTGTATTTCTAATGACCTAAATGTGTAATATACTGTCCGTTTGTCTTTCTGCATAACTCATCATTACCATCACCATTGTTACCAAACAGCTAC\tA\t.\tPASS\tAC=857;AF=0.171126;AFR_AF=0.0348;AMR_AF=0.2349;AN=5008;CS=DEL_pindel;EAS_AF=0.1776;END=217158727;EUR_AF=0.3022;NS=2504;SAS_AF=0.1687;SITEPOST=0.9984;SVTYPE=DEL\tGT\t1|0\n2\t218265091\tALU_umary_ALU_1987\tG\t<INS:ME:ALU>\t.\t.\tAC=1425;AF=0.284545;AFR_AF=0.1997;AMR_AF=0.255;AN=5008;CS=ALU_umary;EAS_AF=0.371;EUR_AF=0.2266;MEINFO=AluYb11,4,281,+;NS=2504;SAS_AF=0.3906;SITEPOST=1;SVLEN=277;SVTYPE=ALU;TSD=AAGACTGGTGG\tGT\t0|1\n2\t220052322\tBI_GS_DEL1_B5_P0471_61\tG\t<CN0>\t100\tPASS\tAC=2021;AF=0.403554;AFR_AF=0.2315;AMR_AF=0.4035;AN=5008;CIEND=0,1;CIPOS=0,1;CS=DEL_union;EAS_AF=0.2351;END=220052915;EUR_AF=0.6362;MC=SI_BD_2642,UW_VH_254,UW_VH_24714;NS=2504;SAS_AF=0.5706;SVTYPE=DEL\tGT\t1|1\n2\t220052751\tYL_CN_ITU_607\tT\t<CN0>\t100\tPASS\tAC=2023;AF=0.403954;AFR_AF=0.2315;AMR_AF=0.4035;AN=5008;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0.2361;END=220056378;EUR_AF=0.6372;MC=UW_VH_2864,UW_VH_13801,BI_GS_DEL1_B1_P0471_47,UW_VH_9092,UW_VH_253,UW_VH_25240,EM_DL_DEL56842,UW_VH_3295;NS=2504;SAS_AF=0.5706;SVTYPE=DEL\tGT\t1|1\n2\t221503768\tL1_umary_LINE1_515\tT\t<INS:ME:LINE1>\t.\t.\tAC=940;AF=0.1877;AFR_AF=0.1649;AMR_AF=0.0951;AN=5008;CS=L1_umary;EAS_AF=0.2183;EUR_AF=0.1203;MEINFO=LINE1,4873,5996,-;NS=2504;SAS_AF=0.3221;SITEPOST=1;SVLEN=1123;SVTYPE=LINE1;TSD=ATCAACATGTTCATTTCTT\tGT\t1|0\n2\t221568789\tUW_VH_10280\tT\t<CN0>\t100\tPASS\tAC=4;AF=0.00079872;AFR_AF=0;AMR_AF=0.0014;AN=5008;CIEND=0,261;CIPOS=-232,0;CS=DEL_union;EAS_AF=0;END=221572221;EUR_AF=0.003;MC=BI_GS_DEL1_B5_P0472_777,EM_DL_DEL56897;NS=2504;SAS_AF=0;SVTYPE=DEL\tGT\t1|0\n2\t223481690\tDEL_pindel_6469\tCAGAAAGATTGATTCTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGTCGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCCGCCTCGGCCTCCCA\tC\t.\tPASS\tAC=3195;AF=0.637979;AFR_AF=0.7587;AMR_AF=0.6297;AN=5008;CS=DEL_pindel;EAS_AF=0.4206;END=223481979;EUR_AF=0.7028;MEINFO=AluYb6_2,40,281,-;NS=2504;SAS_AF=0.638;SITEPOST=0.98835;SVTYPE=DEL_ALU\tGT\t1|1\n2\t223797358\tDEL_pindel_6482\tTAAAAGCATGGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGCGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAA\tT\t.\tPASS\tAC=4407;AF=0.879992;AFR_AF=0.8918;AMR_AF=0.8689;AN=5008;CS=DEL_pindel;EAS_AF=0.9563;END=223797675;EUR_AF=0.7922;MEINFO=AluYb6_2,1,281,+;NS=2504;SAS_AF=0.8834;SITEPOST=1;SVTYPE=DEL_ALU\tGT\t1|1\n2\t225292994\tEM_DL_DEL10598068\tG\t<CN0>\t100\tPASS\tAC=2366;AF=0.472444;AFR_AF=0.6634;AMR_AF=0.389;AN=5008;CIEND=-150,150;CIPOS=-150,150;CS=DEL_union;EAS_AF=0.3641;END=225293946;EUR_AF=0.3827;MC=YL_CN_PEL_573,SI_BD_2675,YL_CN_MSL_577,YL_CN_PUR_747,YL_CN_GWD_863,UW_VH_6450,YL_CN_ESN_666,YL_CN_LWK_595,YL_CN_YRI_821,YL_CN_ASW_660,YL_CN_ITU_614,YL_CN_JPT_672;NS=2504;SAS_AF=0.4775;SVTYPE=DEL\tGT\t1|0\n2\t227017557\tDEL_pindel_6573\tTTCTTTCTCCATCTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGACCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGCAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTC\tT\t.\tPASS\tAC=2159;AF=0.43111;AFR_AF=0.6014;AMR_AF=0.3934;AN=5008;CS=DEL_pindel;EAS_AF=0.2827;END=227017806;EUR_AF=0.4334;MEINFO=AluY,81,281,-;NS=2504;SAS_AF=0.3783;SITEPOST=0.9866;SVTYPE=DEL_ALU\tGT\t0|1\n2\t237701915\tDEL_pindel_6781\tGCAGCTCCAGGTCGTGAGCCCAGACAGGGCCTCAGCTCCAGGTCGTGAGCCCAGACAGGGCCT\tG\t.\tPASS\tAC=2592;AF=0.517572;AFR_AF=0.23;AMR_AF=0.611;AN=5008;CS=DEL_pindel;EAS_AF=0.7044;END=237701977;EUR_AF=0.5636;NS=2504;SAS_AF=0.6002;SITEPOST=0.97835;SVTYPE=DEL\tGT\t1|0\n2\t238553978\tBI_GS_DEL1_B2_P0489_501\tG\t<CN0>\t100\tPASS\tAC=21;AF=0.00419329;AFR_AF=0.0008;AMR_AF=0.0101;AN=5008;CIEND=-11,12;CIPOS=-11,12;CS=DEL_union;EAS_AF=0;END=238559216;EUR_AF=0.0119;MC=EM_DL_DEL57402,SI_BD_2757,YL_CN_TSI_592,UW_VH_4698;NS=2504;SAS_AF=0.001;SVTYPE=DEL\tGT\t1|0\n2\t240958939\tDEL_pindel_6861\tTAAAAAGAACGTGGAGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCATGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAA\tT\t.\tPASS\tAC=2270;AF=0.453275;AFR_AF=0.4909;AMR_AF=0.4885;AN=5008;CS=DEL_pindel;EAS_AF=0.4454;END=240959261;EUR_AF=0.4742;MEINFO=AluYa5,1,281,+;NS=2504;SAS_AF=0.364;SITEPOST=0.9978;SVTYPE=DEL_ALU\tGT\t0|1\n2\t241125050\tDEL_pindel_6878\tGGAAGGGTGAGTTGCATGGTTACCCAGTCCATTCTTAGATGAAGGGTGAGTTGCACGGTTACCCAGTCCTTTCCTAGATAAAGGGTGAATTGCACAGTTACCCAGTTCTTTCCTAGAGGAAGAGTGAGTTGCAAGGTTACCCAGTCCACTCCTAGGTGAAGGGTGGGTGAAGGTGCACATTTACCCAGTCCTTTCCTAAATGGAAGGTGGGTTGCACATTTACGCAGTCCTTTCCTAGATGAAGGGTGAGTTGCAAGGTTACCCAGTCCTTTCCTAGGTGAAGGGTGAGTTGCAAGGTTACCCAGTCCTTTCCTAGATGAAGGGTGAGTTGCACGGTTACCCAGTCCATTCTTAGAT\tG\t.\tPASS\tAC=73;AF=0.0145767;AFR_AF=0.0053;AMR_AF=0.0086;AN=5008;CS=DEL_pindel;EAS_AF=0.001;END=241125406;EUR_AF=0.0378;NS=2504;SAS_AF=0.0215;SITEPOST=0.9933;SVTYPE=DEL\tGT\t0|1\n3\t228934\tDUP_gs_CNV_3_228934_234185\tG\t<CN0>,<CN2>\t.\tPASS\tAC=1416,2;AF=0.282748,0.00039936;AFR_AF=0.2542,0;AMR_AF=0.2147,0.0014;AN=5008;CS=DUP_gs;EAS_AF=0.3492,0.001;END=234185;EUR_AF=0.2187,0;MC=SI_BD_2836,YL_CN_PEL_599,UW_VH_11400,EM_DL_DEL62309,UW_VH_1719,BI_GS_DEL1_B2_P0495_150;NS=2504;SAS_AF=0.3671,0;SITEPOST=1;SVTYPE=CNV\tGT\t1|0\n3\t571750\tDEL_pindel_6963\tTTAACCTTTATTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTGGCTCTGTCGCCCAGGCTGGAGTGCGGTGGCGCGATCTCGGCTCATTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACCACGCCCGGCTAATTTTTTGTAATTTTTAGTAGAGACGGGGTTTCACCGTTTTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCACCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC\tT\t.\tPASS\tAC=479;AF=0.095647;AFR_AF=0.2874;AMR_AF=0.0447;AN=5008;CS=DEL_pindel;EAS_AF=0.0079;END=572075;EUR_AF=0.0199;MEINFO=AluYa,1,281,-;NS=2504;SAS_AF=0.0409;SITEPOST=0.9995;SVTYPE=DEL_ALU\tGT\t1|0\n3\t1629482\tDEL_pindel_6997\tCTATAAGTACAATATAGGTACAATCCCTGTTGTACCTATAAGTACAATATACGTACAGTA\tC\t.\tPASS\tAC=4966;AF=0.991613;AFR_AF=0.9932;AMR_AF=0.9957;AN=5008;CS=DEL_pindel;EAS_AF=0.9931;END=1629541;EUR_AF=0.9891;NS=2504;SAS_AF=0.9877;SITEPOST=1;SVTYPE=DEL\tGT\t1|1\n3\t2311586\tDEL_pindel_7030\tGTTTGTTTGTTTGTTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCCGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCCAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCCTA\tG\t.\tPASS\tAC=2455;AF=0.490216;AFR_AF=0.3116;AMR_AF=0.5893;AN=5008;CS=DEL_pindel;EAS_AF=0.502;END=2311934;EUR_AF=0.5189;MEINFO=AluYb6_2,1,281,-;NS=2504;SAS_AF=0.6196;SITEPOST=0.999;SVTYPE=DEL_ALU\tGT\t1|1\n3\t2962004\tALU_umary_ALU_2103\tT\t<INS:ME:ALU>\t.\t.\tAC=2146;AF=0.428514;AFR_AF=0.4024;AMR_AF=0.3775;AN=5008;CS=ALU_umary;EAS_AF=0.5079;EUR_AF=0.4235;MEINFO=AluUndef,1,281,+;NS=2504;SAS_AF=0.4233;SITEPOST=1;SVLEN=280;SVTYPE=ALU;TSD=AGAAGGAGGCTGGAT\tGT\t1|1\n3\t6103050\tALU_umary_ALU_2121\tT\t<INS:ME:ALU>\t.\t.\tAC=911;AF=0.181909;AFR_AF=0.1014;AMR_AF=0.2118;AN=5008;CS=ALU_umary;EAS_AF=0.3403;EUR_AF=0.0994;MEINFO=AluYb8,1,279,-;NS=2504;SAS_AF=0.1912;SITEPOST=1;SVLEN=278;SVTYPE=ALU;TSD=CCAGGATGGAATCTTT\tGT\t0|1\n3\t6525411\tALU_umary_ALU_2124\tT\t<INS:ME:ALU>\t.\t.\tAC=401;AF=0.0800719;AFR_AF=0.0461;AMR_AF=0.0908;AN=5008;CS=ALU_umary;EAS_AF=0.0893;EUR_AF=0.1034;MEINFO=AluYa5,38,281,-;NS=2504;SAS_AF=0.0849;SITEPOST=1;SVLEN=243;SVTYPE=ALU;TSD=TGGCCTTCTTTTTT\tGT\t0|1\n3\t6650202\tUW_VH_1720\tG\t<CN0>\t100\tPASS\tAC=297;AF=0.0593051;AFR_AF=0.0053;AMR_AF=0.098;AN=5008;CIEND=0,397;CIPOS=-394,0;CS=DEL_union;EAS_AF=0.002;END=6654630;EUR_AF=0.165;MC=EM_DL_DEL62559,BI_GS_DEL1_B3_P0501_20,SI_BD_2893,YL_CN_BEB_545;NS=2504;SAS_AF=0.0552;SVTYPE=DEL\tGT\t0|1\n3\t6700872\tBI_GS_DEL1_B4_P0501_172\tC\t<CN0>\t100\tPASS\tAC=1590;AF=0.317492;AFR_AF=0.1392;AMR_AF=0.3573;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.4236;END=6701254;EUR_AF=0.3588;MC=UW_VH_267;NS=2504;SAS_AF=0.3783;SVTYPE=DEL\tGT\t1|0\n3\t7130385\tALU_umary_ALU_2129\tT\t<INS:ME:ALU>\t.\t.\tAC=2301;AF=0.459465;AFR_AF=0.6316;AMR_AF=0.4006;AN=5008;CS=ALU_umary;EAS_AF=0.3681;EUR_AF=0.3966;MEINFO=AluYb6_2,26,263,-;NS=2504;SAS_AF=0.4274;SITEPOST=1;SVLEN=237;SVTYPE=ALU;TSD=CACTGATTTCTTATT\tGT\t0|1\n3\t7538755\tALU_umary_ALU_2138\tC\t<INS:ME:ALU>\t.\t.\tAC=238;AF=0.047524;AFR_AF=0.0197;AMR_AF=0.0605;AN=5008;CS=ALU_umary;EAS_AF=0.0198;EUR_AF=0.0805;MEINFO=AluUndef,10,281,+;NS=2504;SAS_AF=0.0706;SITEPOST=1;SVLEN=271;SVTYPE=ALU;TSD=AAGATTTACC\tGT\t1|1\n3\t8325606\tBI_GS_DEL1_B5_P0503_440\tA\t<CN0>\t100\tPASS\tAC=726;AF=0.144968;AFR_AF=0.0287;AMR_AF=0.1383;AN=5008;CIEND=-1,1;CIPOS=-1,1;CS=DEL_union;EAS_AF=0.2183;END=8326807;EUR_AF=0.2475;MC=UW_VH_11202,YL_CN_PUR_802,UW_VH_11773,UW_VH_13315,EM_DL_DEL10675403,UW_VH_14442,SI_BD_2903,UW_VH_25241,YL_CN_ITU_660,UW_VH_268;NS=2504;SAS_AF=0.1258;SVTYPE=DEL\tGT\t1|0\n3\t10397456\tDEL_pindel_7199\tTAGAACTACTTGTCCTTTCCGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACACGGTGAAACCCCGTCTCTACTAAAAAAATACAAAAAATTAGCCGGGCGTGGTAGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGGGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCGCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA\tT\t.\tPASS\tAC=2392;AF=0.477636;AFR_AF=0.416;AMR_AF=0.4597;AN=5008;CS=DEL_pindel;EAS_AF=0.5942;END=10397805;EUR_AF=0.4105;MEINFO=AluYc1,1,281,+;NS=2504;SAS_AF=0.5225;SITEPOST=0.9876;SVTYPE=DEL_ALU\tGT\t1|0\n3\t11645651\tUW_VH_11106\tC\t<CN0>\t100\tPASS\tAC=979;AF=0.195487;AFR_AF=0.1316;AMR_AF=0.2435;AN=5008;CIEND=0,209;CIPOS=-204,0;CS=DEL_union;EAS_AF=0.1786;END=11646732;EUR_AF=0.172;MC=SI_BD_2934,BI_GS_DEL1_B3_P0506_28,UW_VH_10838;NS=2504;SAS_AF=0.2894;SVTYPE=DEL\tGT\t1|0\n3\t12196517\tDEL_pindel_7229\tCTCCTTTTCACCTTTCAGACGAGATCGGGCGCGTTCAGGGTGGTATGGCCGTAGAT\tC\t.\tPASS\tAC=3114;AF=0.621805;AFR_AF=0.5371;AMR_AF=0.647;AN=5008;CS=DEL_pindel;EAS_AF=0.63;END=12196572;EUR_AF=0.67;NS=2504;SAS_AF=0.6605;SITEPOST=0.9852;SVTYPE=DEL\tGT\t0|1\n3\t12818468\tALU_umary_ALU_2160\tT\t<INS:ME:ALU>\t.\t.\tAC=1303;AF=0.260184;AFR_AF=0.3177;AMR_AF=0.2723;AN=5008;CS=ALU_umary;EAS_AF=0.1379;EUR_AF=0.4105;MEINFO=AluUndef,7,280,-;NS=2504;SAS_AF=0.1452;SITEPOST=1;SVLEN=273;SVTYPE=ALU;TSD=GGGGCTGTTGTTTATT\tGT\t0|1\n3\t13681157\tUW_VH_2294\tT\t<CN0>\t100\tPASS\tAC=376;AF=0.0750799;AFR_AF=0.0061;AMR_AF=0.0735;AN=5008;CIEND=0,385;CIPOS=-403,0;CS=DEL_union;EAS_AF=0.0089;END=13682269;EUR_AF=0.1819;MC=SI_BD_2954,BI_GS_DEL1_B1_P0508_597;NS=2504;SAS_AF=0.1278;SVTYPE=DEL\tGT\t1|0\n3\t16239410\tBI_GS_DEL1_B1_P0511_275\tC\t<CN0>\t100\tPASS\tAC=1062;AF=0.212061;AFR_AF=0.2231;AMR_AF=0.2219;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.2421;END=16241213;EUR_AF=0.2008;MC=SI_BD_2973,YL_CN_CHB_698,YL_CN_CEU_826,UW_VH_8196,EM_DL_DEL10678764,UW_VH_4780;NS=2504;SAS_AF=0.1708;SVTYPE=DEL\tGT\t1|0\n3\t17948538\tDEL_pindel_7372\tTAAGAAGTATGGTGTCGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCAGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAA\tT\t.\tPASS\tAC=512;AF=0.102236;AFR_AF=0.1082;AMR_AF=0.2003;AN=5008;CS=DEL_pindel;EAS_AF=0.0952;END=17948858;EUR_AF=0.0636;MEINFO=AluYa5,1,281,+;NS=2504;SAS_AF=0.0716;SITEPOST=1;SVTYPE=DEL_ALU\tGT\t0|1\n3\t19035452\tALU_umary_ALU_2188\tT\t<INS:ME:ALU>\t.\t.\tAC=1984;AF=0.396166;AFR_AF=0.2791;AMR_AF=0.4078;AN=5008;CS=ALU_umary;EAS_AF=0.4722;EUR_AF=0.4493;MEINFO=AluUndef,1,272,+;NS=2504;SAS_AF=0.4131;SITEPOST=1;SVLEN=271;SVTYPE=ALU;TSD=AAAACCAAGGTCAT\tGT\t0|1\n3\t20919491\tDEL_pindel_7422\tTCTAATCAACTGCTAGCAAATATAAAGCAGGCAGAAAAACATGAAAAAGTGAGACTGGCCTAGCCTTCCAGCCTACATCTTTCTCCTGTGCTGGATACTTCCTGACCTCAAACATCAGACTCCACGTTCTTCAGTTTTGAAACTCGAACTGGCTCTCTTTTCTCCTCAAGCTTGCAGACAGCCTATTGTGGGACATTGTGATTGTGTAAGTTAATACTTAATAAATTCCCCTCTCTATATAAATACATCCTATTAGTTCTGTGCCTCTAGAGAACC\tT\t.\tPASS\tAC=377;AF=0.0752795;AFR_AF=0.1793;AMR_AF=0.0605;AN=5008;CS=DEL_pindel;EAS_AF=0;END=20919766;EUR_AF=0.0765;NS=2504;SAS_AF=0.0215;SITEPOST=1;SVTYPE=DEL\tGT\t0|1\n3\t21457497\tDEL_pindel_7440\tGCATGAACTTCTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGTCGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGC\tG\t.\tPASS\tAC=3201;AF=0.639177;AFR_AF=0.7511;AMR_AF=0.5605;AN=5008;CS=DEL_pindel;EAS_AF=0.6062;END=21457820;EUR_AF=0.6322;MEINFO=AluYb6_2,2,281,-;NS=2504;SAS_AF=0.5849;SITEPOST=0.9909;SVTYPE=DEL_ALU\tGT\t0|1\n3\t23764057\tDEL_pindel_7477\tTAAAATGTTTGATACAAGGCCGGGCGCAGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGTGGGTGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAGCACGGTGAAACCCCTTCTCTACTAAAAATACAAAAAATTAGCCGGGAGCGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCGGGAGAATGCCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCGGAGATCGCGCCACTGCACTCCAGCCTGGGTGACAGAGAGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA\tT\t.\tPASS\tAC=2026;AF=0.404553;AFR_AF=0.3132;AMR_AF=0.3156;AN=5008;CS=DEL_pindel;EAS_AF=0.5089;END=23764387;EUR_AF=0.4076;MEINFO=AluY,1,281,+;NS=2504;SAS_AF=0.4806;SITEPOST=0.9976;SVTYPE=DEL_ALU\tGT\t1|0\n3\t25030880\tUW_VH_3644\tT\t<CN0>\t100\tPASS\tAC=2580;AF=0.515176;AFR_AF=0.5318;AMR_AF=0.6081;AN=5008;CIEND=0,486;CIPOS=-582,0;CS=DEL_union;EAS_AF=0.5397;END=25032246;EUR_AF=0.4135;MC=YL_CN_TSI_633,SI_BD_3013,UW_VH_16306,BI_GS_DEL1_B1_P0520_28;NS=2504;SAS_AF=0.5061;SVTYPE=DEL\tGT\t0|1\n3\t25278459\tALU_umary_ALU_2227\tT\t<INS:ME:ALU>\t.\t.\tAC=696;AF=0.138978;AFR_AF=0.1445;AMR_AF=0.0793;AN=5008;CS=ALU_umary;EAS_AF=0.1091;EUR_AF=0.1292;MEINFO=AluUndef,1,281,-;NS=2504;SAS_AF=0.2147;SITEPOST=1;SVLEN=280;SVTYPE=ALU;TSD=TCCTGTTTCTTT\tGT\t0|1\n3\t26123847\tDEL_pindel_7524\tTACATTTATACATACATACATAAATACATAACATATACTTGCATATATGTGTGTGGGTATATATATGTGTGTGTGTGTGTGCATATATATATATATATATATATATGCAAGTTAACAGAATAATATGGA\tT\t.\tPASS\tAC=3239;AF=0.646765;AFR_AF=0.261;AMR_AF=0.6888;AN=5008;CS=DEL_pindel;EAS_AF=0.9286;END=26123975;EUR_AF=0.7922;NS=2504;SAS_AF=0.6984;SITEPOST=0.9978;SVTYPE=DEL\tGT\t1|1\n3\t26432727\tDUP_gs_CNV_3_26432727_26439290\tA\t<CN0>,<CN2>,<CN3>\t.\tPASS\tAC=148,8,2;AF=0.0295527,0.00159744,0.00039936;AFR_AF=0.0136,0.003,0.0015;AMR_AF=0.036,0.0014,0;AN=5008;CS=DUP_gs;EAS_AF=0.002,0,0;END=26439290;EUR_AF=0.0994,0.003,0;NS=2504;SAS_AF=0.0031,0,0;SITEPOST=1;SVTYPE=CNV\tGT\t1|0\n3\t26469887\tDEL_pindel_7537\tCACTAACAATGAAATATAACTTTATCTTTTTAAATTTGGGTGTTTATTTTTGACTCTAACAGCCATCTCTTTGGAGAAGTAATTAGCTTCTTAGTA\tC\t.\tPASS\tAC=837;AF=0.167133;AFR_AF=0.0545;AMR_AF=0.1614;AN=5008;CS=DEL_pindel;EAS_AF=0.375;END=26469982;EUR_AF=0.1392;NS=2504;SAS_AF=0.138;SITEPOST=0.9997;SVTYPE=DEL\tGT\t1|0\n3\t26524464\tL1_umary_LINE1_567\tT\t<INS:ME:LINE1>\t.\t.\tAC=951;AF=0.189896;AFR_AF=0.1536;AMR_AF=0.1484;AN=5008;CS=L1_umary;EAS_AF=0.2321;EUR_AF=0.16;MEINFO=LINE1,4685,6005,-;NS=2504;SAS_AF=0.2556;SITEPOST=1;SVLEN=1320;SVTYPE=LINE1;TSD=AAATAGCCACGTTTTTCT\tGT\t0|1\n3\t29550384\tALU_umary_ALU_2253\tT\t<INS:ME:ALU>\t.\t.\tAC=672;AF=0.134185;AFR_AF=0.0825;AMR_AF=0.1023;AN=5008;CS=ALU_umary;EAS_AF=0.3115;EUR_AF=0.0408;MEINFO=AluYb8,1,280,-;NS=2504;SAS_AF=0.1401;SITEPOST=1;SVLEN=279;SVTYPE=ALU;TSD=TAATGATCGCCATTCT\tGT\t0|1\n3\t31856630\tDEL_pindel_7640\tAGAGAGATGCCCTGCCAGCCCCTGGCTTGCTCTTCCCGCCCTGAGACAACATGAACACC\tA\t.\tPASS\tAC=1795;AF=0.358427;AFR_AF=0.2625;AMR_AF=0.4049;AN=5008;CS=DEL_pindel;EAS_AF=0.4256;END=31856688;EUR_AF=0.3559;NS=2504;SAS_AF=0.3885;SITEPOST=0.9933;SVTYPE=DEL\tGT\t0|1\n3\t32102050\tBI_GS_DEL1_B1_P0527_95\tC\t<CN0>\t100\tPASS\tAC=2457;AF=0.490615;AFR_AF=0.2284;AMR_AF=0.6311;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.4147;END=32107887;EUR_AF=0.6928;MC=YL_CN_ASW_722,YL_CN_CLM_587,SI_BD_3058,EM_DL_DEL63333,UW_VH_4625;NS=2504;SAS_AF=0.6155;SVTYPE=DEL\tGT\t1|0\n3\t32203861\tDEL_pindel_7651\tACCTTAATTACCTTTTCTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCCGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCAAGCCATTCTCCTGCCTCAGCCTCCCCAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTGC\tA\t.\tPASS\tAC=1970;AF=0.393371;AFR_AF=0.4652;AMR_AF=0.3112;AN=5008;CS=DEL_pindel;EAS_AF=0.4931;END=32204143;EUR_AF=0.2704;MEINFO=AluYb6_2,34,281,-;NS=2504;SAS_AF=0.3783;SITEPOST=0.9995;SVTYPE=DEL_ALU\tGT\t1|0\n3\t32940758\tDEL_pindel_7674\tATCCAAGAGGATTGATGACATGTCCACACAAAAACTAGTACATGAATGTTCATAGCAACATGATTCATAATAGCCCCAAATGCAGGCAACCCAAATT\tA\t.\tPASS\tAC=888;AF=0.177316;AFR_AF=0.1407;AMR_AF=0.2219;AN=5008;CS=DEL_pindel;EAS_AF=0.0208;END=32940854;EUR_AF=0.2982;NS=2504;SAS_AF=0.2321;SITEPOST=1;SVTYPE=DEL\tGT\t1|0\n3\t35051657\tDEL_pindel_7727\tATATTTAAATTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGTCGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC\tA\t.\tPASS\tAC=3442;AF=0.6873;AFR_AF=0.7012;AMR_AF=0.6844;AN=5008;CS=DEL_pindel;EAS_AF=0.6845;END=35051985;EUR_AF=0.6501;MEINFO=AluYb6_2,1,281,-;NS=2504;SAS_AF=0.7117;SITEPOST=0.9502;SVTYPE=DEL_ALU\tGT\t0|1\n3\t35709332\tDEL_pindel_7732\tCAAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAGGAAGAGGAAGAGGAAGAGGAAGGAGGAGGAGGAGGAGGAGGAGAAGGA\tC\t.\tPASS\tAC=344;AF=0.0686901;AFR_AF=0.0635;AMR_AF=0.0706;AN=5008;CS=DEL_pindel;EAS_AF=0.0526;END=35709431;EUR_AF=0.0706;NS=2504;SAS_AF=0.089;SITEPOST=0.9904;SVTYPE=DEL\tGT\t1|0\n3\t36108120\tDEL_pindel_7740\tGCGTTTCTTTTGTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCCTCTCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGC\tG\t.\tPASS\tAC=2577;AF=0.514577;AFR_AF=0.2799;AMR_AF=0.5173;AN=5008;CS=DEL_pindel;EAS_AF=0.7093;END=36108438;EUR_AF=0.5318;MEINFO=AluYa1_1,2,281,-;NS=2504;SAS_AF=0.6115;SITEPOST=0.99725;SVTYPE=DEL_ALU\tGT\t0|1\n3\t37361602\tALU_umary_ALU_2292\tT\t<INS:ME:ALU>\t.\t.\tAC=529;AF=0.105631;AFR_AF=0.003;AMR_AF=0.1081;AN=5008;CS=ALU_umary;EAS_AF=0.1548;EUR_AF=0.1402;MEINFO=AluUndef,67,281,-;NS=2504;SAS_AF=0.1564;SITEPOST=1;SVLEN=214;SVTYPE=ALU;TSD=null\tGT\t0|1\n3\t38399708\tALU_umary_ALU_2298\tT\t<INS:ME:ALU>\t.\t.\tAC=1673;AF=0.334065;AFR_AF=0.2474;AMR_AF=0.3386;AN=5008;CS=ALU_umary;EAS_AF=0.379;EUR_AF=0.3559;MEINFO=AluUndef,22,264,+;NS=2504;SAS_AF=0.3793;SITEPOST=1;SVLEN=242;SVTYPE=ALU;TSD=AAAAGTTTGGT\tGT\t0|1\n3\t39260355\tDEL_pindel_7785\tACGAAGCTCAGCCTGGTTCCACCAATGTTTCCTCAGGACTGGATTCACATTTGTGTTCTGGGAGTGC\tA\t.\tPASS\tAC=202;AF=0.0403355;AFR_AF=0.0681;AMR_AF=0.0259;AN=5008;CS=DEL_pindel;EAS_AF=0.0456;END=39260421;EUR_AF=0.0089;NS=2504;SAS_AF=0.0399;SITEPOST=0.9996;SVTYPE=DEL\tGT\t1|0\n3\t40241622\tALU_umary_ALU_2306\tT\t<INS:ME:ALU>\t.\t.\tAC=1385;AF=0.276558;AFR_AF=0.0908;AMR_AF=0.255;AN=5008;CS=ALU_umary;EAS_AF=0.4603;EUR_AF=0.2883;MEINFO=AluUndef,1,281,-;NS=2504;SAS_AF=0.3415;SITEPOST=1;SVLEN=280;SVTYPE=ALU;TSD=TACATTTTCTTTTT\tGT\t1|1\n3\t45542662\tALU_umary_ALU_2325\tT\t<INS:ME:ALU>\t.\t.\tAC=1719;AF=0.343251;AFR_AF=0.0635;AMR_AF=0.4207;AN=5008;CS=ALU_umary;EAS_AF=0.4861;EUR_AF=0.4364;MEINFO=AluUndef,3,281,-;NS=2504;SAS_AF=0.4233;SITEPOST=1;SVLEN=278;SVTYPE=ALU;TSD=TGGAATTTTT\tGT\t1|0\n3\t45768351\tDEL_pindel_7901\tTGCTTTATTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCACCCAGGCCGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC\tT\t.\tPASS\tAC=2474;AF=0.49401;AFR_AF=0.556;AMR_AF=0.5231;AN=5008;CS=DEL_pindel;EAS_AF=0.3661;END=45768676;EUR_AF=0.6272;MEINFO=AluYb6_2,1,281,-;NS=2504;SAS_AF=0.3845;SITEPOST=0.9987;SVTYPE=DEL_ALU\tGT\t1|1\n3\t48957701\tYL_CN_ITU_698\tA\t<CN0>\t100\tPASS\tAC=3750;AF=0.748802;AFR_AF=0.5454;AMR_AF=0.7608;AN=5008;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0.9444;END=48959056;EUR_AF=0.6501;MC=YL_CN_ASW_735;NS=2504;SAS_AF=0.9151;SVTYPE=DEL\tGT\t1|1\n3\t49494276\tDEL_pindel_7990\tTGATGGTAACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCATGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCCC\tT\t.\tPASS\tAC=4042;AF=0.807109;AFR_AF=0.7542;AMR_AF=0.8184;AN=5008;CS=DEL_pindel;EAS_AF=0.8274;END=49494605;EUR_AF=0.837;MEINFO=AluYa5,1,281,-;NS=2504;SAS_AF=0.819;SITEPOST=0.9806;SVTYPE=DEL_ALU\tGT\t1|1\n3\t50123658\tBI_GS_DEL1_B3_P0545_3\tG\t<CN0>\t100\tPASS\tAC=79;AF=0.0157748;AFR_AF=0.0015;AMR_AF=0.0187;AN=5008;CIEND=-34,35;CIPOS=-34,35;CS=DEL_union;EAS_AF=0.001;END=50124725;EUR_AF=0.0577;MC=UW_VH_2019,SI_BD_3156;NS=2504;SAS_AF=0.0051;SVTYPE=DEL\tGT\t0|1\n3\t50879175\tALU_umary_ALU_2347\tT\t<INS:ME:ALU>\t.\t.\tAC=2678;AF=0.534744;AFR_AF=0.4592;AMR_AF=0.438;AN=5008;CS=ALU_umary;EAS_AF=0.4782;EUR_AF=0.668;MEINFO=AluUndef,2,280,-;NS=2504;SAS_AF=0.6268;SITEPOST=1;SVLEN=278;SVTYPE=ALU;TSD=TATTGTTACCTTTTCT\tGT\t1|1\n3\t53027106\tUW_VH_10112\tT\t<CN0>\t100\tPASS\tAC=275;AF=0.0549121;AFR_AF=0.0068;AMR_AF=0.1052;AN=5008;CIEND=0,324;CIPOS=-310,0;CS=DEL_union;EAS_AF=0.0546;END=53038920;EUR_AF=0.0775;MC=UW_VH_2718,YL_CN_BEB_570,BI_GS_DEL1_B2_P0548_15,EM_DL_DEL63845;NS=2504;SAS_AF=0.0613;SVTYPE=DEL\tGT\t1|0\n3\t55788580\tL1_umary_LINE1_590\tA\t<INS:ME:LINE1>\t.\t.\tAC=1868;AF=0.373003;AFR_AF=0.1952;AMR_AF=0.3026;AN=5008;CS=L1_umary;EAS_AF=0.4464;EUR_AF=0.4334;MEINFO=LINE1,1,6010,+;NS=2504;SAS_AF=0.5256;SITEPOST=1;SVLEN=6009;SVTYPE=LINE1;TSD=AAATATGAATTTA\tGT\t1|1\n3\t56604704\tBI_GS_DEL1_B1_P0551_612\tA\t<CN0>\t100\tPASS\tAC=3249;AF=0.648762;AFR_AF=0.6029;AMR_AF=0.7839;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.5417;END=56604961;EUR_AF=0.8459;MC=DEL_pindel_8129,UW_VH_283;NS=2504;SAS_AF=0.5225;SVTYPE=DEL\tGT\t1|1\n3\t59852903\tL1_umary_LINE1_597\tA\t<INS:ME:LINE1>\t.\t.\tAC=2726;AF=0.544329;AFR_AF=0.7148;AMR_AF=0.3487;AN=5008;CS=L1_umary;EAS_AF=0.5714;EUR_AF=0.4652;MEINFO=LINE1,5089,6018,-;NS=2504;SAS_AF=0.5061;SITEPOST=1;SVLEN=929;SVTYPE=LINE1;TSD=AATAATCAGCAGAACCA\tGT\t1|0\n3\t61475048\tDEL_pindel_8250\tAAGCTTACATGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCACCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC\tA\t.\tPASS\tAC=1203;AF=0.240216;AFR_AF=0.3782;AMR_AF=0.2406;AN=5008;CS=DEL_pindel;EAS_AF=0.1349;END=61475371;EUR_AF=0.1511;MEINFO=AluYa4_5,1,281,-;NS=2504;SAS_AF=0.2536;SITEPOST=0.9997;SVTYPE=DEL_ALU\tGT\t1|0\n3\t61666415\tDEL_pindel_8255\tGTGGTACAGGTTGCAGGGAGGTGGGGATGGGGATGACTAGGGTCACAGCAGGCAATAACTAGGGTTATTGGCACCCGGTTGGTGTTTGGTGCCTGCTGTGTAACTTGCTGGGTGTTGGGAACCTGTATATGGCATATGCCATGTGCACAGTGGGATGTGTTTAAAATGTGGGAGACAGGAGCTGTATGGAAATCATTATTTTCAAATGCGGTCATGGCTTTTAGGTTGTGAATTTTTGTTCCTTTCCAAAACCGGTTTAGATGAGCAGCTT\tG\t.\tPASS\tAC=736;AF=0.146965;AFR_AF=0.1074;AMR_AF=0.2046;AN=5008;CS=DEL_pindel;EAS_AF=0.0883;END=61666685;EUR_AF=0.1938;NS=2504;SAS_AF=0.1718;SITEPOST=0.95435;SVTYPE=DEL\tGT\t0|1\n3\t63540965\tALU_umary_ALU_2401\tT\t<INS:ME:ALU>\t.\t.\tAC=1005;AF=0.200679;AFR_AF=0.0817;AMR_AF=0.1455;AN=5008;CS=ALU_umary;EAS_AF=0.2361;EUR_AF=0.2545;MEINFO=AluYb8,1,281,-;NS=2504;SAS_AF=0.3088;SITEPOST=1;SVLEN=280;SVTYPE=ALU;TSD=AGAAAAATACTTCCT\tGT\t1|1\n3\t66951653\tALU_umary_ALU_2413\tT\t<INS:ME:ALU>\t.\t.\tAC=218;AF=0.0435303;AFR_AF=0.0265;AMR_AF=0.1196;AN=5008;CS=ALU_umary;EAS_AF=0.001;EUR_AF=0.0547;MEINFO=AluUndef,1,280,-;NS=2504;SAS_AF=0.045;SITEPOST=1;SVLEN=279;SVTYPE=ALU;TSD=TGATTTTGTTGATCTTTT\tGT\t1|0\n3\t68634740\tUW_VH_2022\tG\t<CN0>\t100\tPASS\tAC=2283;AF=0.455871;AFR_AF=0.2897;AMR_AF=0.3256;AN=5008;CIEND=0,567;CIPOS=-516,0;CS=DEL_union;EAS_AF=0.8204;END=68640254;EUR_AF=0.3539;MC=EM_DL_DEL64242,BI_GS_DEL1_B1_P0563_617,SI_BD_3234,YL_CN_TSI_658;NS=2504;SAS_AF=0.502;SVTYPE=DEL\tGT\t1|0\n3\t68739655\tSI_BD_3235\tC\t<CN0>\t100\tPASS\tAC=3439;AF=0.686701;AFR_AF=0.4516;AMR_AF=0.6066;AN=5008;CIEND=-50,233;CIPOS=-233,106;CS=DEL_union;EAS_AF=0.9048;END=68747879;EUR_AF=0.6581;MC=EM_DL_DEL64243,UW_VH_12502,YL_CN_ESN_761;NS=2504;SAS_AF=0.8661;SVTYPE=DEL\tGT\t1|0\n3\t70415105\tDEL_pindel_8396\tTTGTGCTTTACCTTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGTCGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACTGCGCCCGGCC\tT\t.\tPASS\tAC=2109;AF=0.421126;AFR_AF=0.4455;AMR_AF=0.4597;AN=5008;CS=DEL_pindel;EAS_AF=0.3542;END=70415440;EUR_AF=0.4672;MEINFO=AluYb6_2,1,281,-;NS=2504;SAS_AF=0.3824;SITEPOST=0.9931;SVTYPE=DEL_ALU\tGT\t1|1\n3\t73063077\tDEL_pindel_8445\tCCACCGCGCCCGGGCTTGTATTTGGATATCTTACCAAAACACAAAAATTTACCTCGTTGTCTTCATGGGCTGCATAATATTTTATTGTTTTGGGTGTTCTTTATTTAACCTGTCTTCTTTGATGGTTTTTTGGGCAGTTTACAGTTACCAACCAATTCAAACAGTGCTTAAGTTAATATACTGGCACAGATGTAAGAGTGGGATTTATGGGTTCATGATTATGTACGTTACTATGTTTGACAGATACTGCCAGCTGGCTTTCCAAAAAACTTGTTCAGTATGTGCTTCTACTAGCAGTATATGAAAGTTATCTCTATATCCATGTTAGCACCAAGCATTATTCAGATTTTAAAATTATTTTTATTTTTATATTTATTTTTGAGACCGGGTCTCACTCTGGCCCAGGCTGGAGTGCAGTGGCATGATCATAGCTTACTGCAACCTCAAACTCCTAGGCTCAAGTGATTTTCCCACCTGA\tC\t.\tPASS\tAC=1073;AF=0.214257;AFR_AF=0.205;AMR_AF=0.232;AN=5008;CS=DEL_pindel;EAS_AF=0.0853;END=73063554;EUR_AF=0.332;NS=2504;SAS_AF=0.226;SITEPOST=0.9991;SVTYPE=DEL\tGT\t0|1\n3\t74765412\tDEL_pindel_8483\tTTAAAGTTATTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGCGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCTACCACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC\tT\t.\tPASS\tAC=1613;AF=0.322085;AFR_AF=0.4039;AMR_AF=0.3386;AN=5008;CS=DEL_pindel;EAS_AF=0.1111;END=74765735;EUR_AF=0.4165;MEINFO=AluYc1,1,281,-;NS=2504;SAS_AF=0.32;SITEPOST=0.9954;SVTYPE=DEL_ALU\tGT\t0|1\n3\t75367119\tDEL_pindel_8502\tGTGGGTTAATCAAGAACAATGTCATCTGTGGAGCCTCTTGGAAGCAGTAAATGGCCCACTCCTTTTAAAATTGCAGGCATGC\tG\t.\tPASS\tAC=309;AF=0.0617013;AFR_AF=0.0325;AMR_AF=0.0476;AN=5008;CS=DEL_pindel;EAS_AF=0.0506;END=75367200;EUR_AF=0.0606;NS=2504;SAS_AF=0.1237;SITEPOST=0.9994;SVTYPE=DEL\tGT\t0|1\n3\t75423550\tDUP_gs_CNV_3_75423550_75458952\tT\t<CN0>,<CN2>\t.\tPASS\tAC=82,1;AF=0.0163738,0.00019968;AFR_AF=0.0038,0;AMR_AF=0.0159,0;AN=5008;CS=DUP_gs;EAS_AF=0.002,0.001;END=75458952;EUR_AF=0.0586,0;NS=2504;SAS_AF=0.0051,0;SITEPOST=1;SVTYPE=CNV\tGT\t0|1\n3\t75423612\tEM_DL_DEL64345\tC\t<CN0>\t100\tPASS\tAC=84;AF=0.0167732;AFR_AF=0.0038;AMR_AF=0.0159;AN=5008;CIEND=-150,150;CIPOS=-150,150;CS=DEL_union;EAS_AF=0.001;END=75642120;EUR_AF=0.0616;NS=2504;SAS_AF=0.0051;SVTYPE=DEL\tGT\t0|1\n3\t75495797\tDUP_gs_CNV_3_75495797_75527865\tT\t<CN0>,<CN2>\t.\tPASS\tAC=81,11;AF=0.0161741,0.00219649;AFR_AF=0.0038,0.0061;AMR_AF=0.0159,0.0029;AN=5008;CS=DUP_gs;EAS_AF=0.001,0.001;END=75527865;EUR_AF=0.0586,0;NS=2504;SAS_AF=0.0051,0;SITEPOST=1;SVTYPE=CNV\tGT\t0|1\n3\t75532164\tDUP_gs_CNV_3_75532164_75569195\tA\t<CN0>,<CN2>\t.\tPASS\tAC=82,1;AF=0.0163738,0.00019968;AFR_AF=0.0038,0;AMR_AF=0.0159,0;AN=5008;CS=DUP_gs;EAS_AF=0.001,0.001;END=75569195;EUR_AF=0.0586,0;NS=2504;SAS_AF=0.0061,0;SITEPOST=1;SVTYPE=CNV\tGT\t0|1\n3\t75597940\tDUP_gs_CNV_3_75597940_75615947\tG\t<CN0>,<CN2>\t.\tPASS\tAC=82,3;AF=0.0163738,0.00059904;AFR_AF=0.0038,0;AMR_AF=0.0159,0;AN=5008;CS=DUP_gs;EAS_AF=0.001,0.001;END=75615947;EUR_AF=0.0586,0;NS=2504;SAS_AF=0.0061,0.002;SITEPOST=1;SVTYPE=CNV\tGT\t0|1\n3\t76222309\tALU_umary_ALU_2455\tA\t<INS:ME:ALU>\t.\t.\tAC=662;AF=0.132188;AFR_AF=0.1596;AMR_AF=0.1369;AN=5008;CS=ALU_umary;EAS_AF=0.2113;EUR_AF=0.0517;MEINFO=AluUndef,1,281,+;NS=2504;SAS_AF=0.093;SITEPOST=1;SVLEN=280;SVTYPE=ALU;TSD=AAAATTCTTTGA\tGT\t0|1\n3\t76985883\tALU_umary_ALU_2461\tT\t<INS:ME:ALU>\t.\t.\tAC=1879;AF=0.3752;AFR_AF=0.4334;AMR_AF=0.304;AN=5008;CS=ALU_umary;EAS_AF=0.373;EUR_AF=0.3131;MEINFO=AluYc1,2,281,+;NS=2504;SAS_AF=0.4131;SITEPOST=1;SVLEN=279;SVTYPE=ALU;TSD=AAGAATTCATTTT\tGT\t1|0\n3\t80062916\tBI_GS_DEL1_B2_P0575_38\tT\t<CN0>\t100\tPASS\tAC=2747;AF=0.548522;AFR_AF=0.2799;AMR_AF=0.67;AN=5008;CIEND=-36,37;CIPOS=-36,37;CS=DEL_union;EAS_AF=0.5694;END=80064350;EUR_AF=0.6123;MC=YL_CN_TSI_675,UW_VH_2577,SI_BD_3290,YL_CN_CHB_754,YL_CN_PUR_880,YL_CN_FIN_704,YL_CN_STU_722,YL_CN_KHV_769,YL_CN_PJL_755,YL_CN_CHS_737,YL_CN_GWD_1010,YL_CN_GIH_546;NS=2504;SAS_AF=0.7382;SVTYPE=DEL\tGT\t1|0\n3\t80964882\tALU_umary_ALU_2478\tT\t<INS:ME:ALU>\t.\t.\tAC=897;AF=0.179113;AFR_AF=0.0651;AMR_AF=0.2104;AN=5008;CS=ALU_umary;EAS_AF=0.1022;EUR_AF=0.2535;MEINFO=AluUndef,1,260,+;NS=2504;SAS_AF=0.3139;SITEPOST=1;SVLEN=259;SVTYPE=ALU;TSD=AAAATTT\tGT\t1|0\n3\t81346065\tDEL_pindel_8599\tTAAAAATGAGTACCTGTGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCAAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCATAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGGACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAA\tT\t.\tPASS\tAC=1563;AF=0.312101;AFR_AF=0.3911;AMR_AF=0.2277;AN=5008;CS=DEL_pindel;EAS_AF=0.3899;END=81346380;EUR_AF=0.2684;MEINFO=AluYa5,1,281,+;NS=2504;SAS_AF=0.2301;SITEPOST=0.9994;SVTYPE=DEL_ALU\tGT\t0|1\n3\t81907492\tDEL_pindel_8609\tTAAAAACTGGTAAACCGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGGCCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAA\tT\t.\tPASS\tAC=3875;AF=0.773762;AFR_AF=0.7428;AMR_AF=0.7867;AN=5008;CS=DEL_pindel;EAS_AF=0.8046;END=81907812;EUR_AF=0.7734;MEINFO=AluYa5a1,1,281,+;NS=2504;SAS_AF=0.7751;SITEPOST=0.9471;SVTYPE=DEL_ALU\tGT\t0|1\n3\t83304066\tALU_umary_ALU_2487\tA\t<INS:ME:ALU>\t.\t.\tAC=2091;AF=0.417532;AFR_AF=0.3843;AMR_AF=0.4207;AN=5008;CS=ALU_umary;EAS_AF=0.4415;EUR_AF=0.4205;MEINFO=AluUndef,17,280,-;NS=2504;SAS_AF=0.4325;SITEPOST=1;SVLEN=263;SVTYPE=ALU;TSD=A\tGT\t1|0\n3\t84104923\tUW_VH_1725\tT\t<CN0>\t100\tPASS\tAC=815;AF=0.16274;AFR_AF=0.0234;AMR_AF=0.1614;AN=5008;CIEND=0,418;CIPOS=-380,0;CS=DEL_union;EAS_AF=0.2391;END=84107402;EUR_AF=0.2167;MC=BI_GS_DEL1_B5_P0579_98,YL_CN_PJL_758,YL_CN_CHB_758,EM_DL_DEL64493;NS=2504;SAS_AF=0.2178;SVTYPE=DEL\tGT\t0|1\n3\t84404171\tDEL_pindel_8634\tTACACATGCTTATAAAATCATTACATCTTCTCCTGTGAATTCAGCCACCATTTCTTTGCCAATAGCTCTAAAA\tT\t.\tPASS\tAC=482;AF=0.096246;AFR_AF=0.1974;AMR_AF=0.0994;AN=5008;CS=DEL_pindel;EAS_AF=0;END=84404243;EUR_AF=0.1014;NS=2504;SAS_AF=0.0511;SITEPOST=0.9988;SVTYPE=DEL\tGT\t1|0\n3\t85576571\tL1_umary_LINE1_629\tG\t<INS:ME:LINE1>\t.\t.\tAC=1334;AF=0.266374;AFR_AF=0.0582;AMR_AF=0.2968;AN=5008;CS=L1_umary;EAS_AF=0.4921;EUR_AF=0.336;MEINFO=LINE1,30,6019,-;NS=2504;SAS_AF=0.2219;SITEPOST=1;SVLEN=5989;SVTYPE=LINE1;TSD=AAAACAAAGAAAGAAAAAATTCTGTGG\tGT\t1|0\n3\t86213403\tDEL_pindel_8664\tATTAACGTATATAAACTTTCATAGCCAAATAAAATATAGAGGCAAATCTCTGAAATTAAAATGTTTTATTTGGAAGAAAATAATTGCAATTCTGGGCATATACATAGACCAGCTGGTCTTCTATATGTCCAAAGAACAAAGAGAAGATGAGAGATTTTGTAAAAAGGATAAATGTTATGTATTTCTCTTTGAAAAAAATTCATTGGCATTGGTAAGGTCTTGAGGAACTGGCAAGTTCTGATTAGTGAGTGACAGCAGTGGCAAACTAGTCTTAGAGTTGCAGCAGGTCGTTTCAGTAGCCACTACATAAAACTACTT\tA\t.\tPASS\tAC=958;AF=0.191294;AFR_AF=0.0272;AMR_AF=0.2248;AN=5008;CS=DEL_pindel;EAS_AF=0.2619;END=86213720;EUR_AF=0.2634;NS=2504;SAS_AF=0.2423;SITEPOST=1;SVTYPE=DEL\tGT\t0|1\n3\t87482522\tDEL_pindel_8702\tATTAAGGGTATAAATCTATTGAACTAAAGTCATATGTTTATGCACTTGCCTTAGAGGAGTGTTAGACATGAATTCTAAATTTCTT\tA\t.\tPASS\tAC=586;AF=0.117013;AFR_AF=0.2504;AMR_AF=0.0403;AN=5008;CS=DEL_pindel;EAS_AF=0.0843;END=87482606;EUR_AF=0.0636;NS=2504;SAS_AF=0.0798;SITEPOST=0.9998;SVTYPE=DEL\tGT\t0|1\n3\t88453730\tDEL_pindel_8721\tCCTCTCCATTTACTCTTTGTTTCTCTCTTTCTAGAAACACGACTTTATAACCTATTATTATCCATACAACTCCATCATTCTGAGTTGTACTTCCTCTTGTGCTGTGTTAATACTTATTTGCCCCTAATTCTTAAGTTGATGTCTTTTTCTCTTCGAACTTTTGTTCTATTTCTTCCTTTGTCCAAACATCACCGCTCTCTGCCTTCATTTATTCCTTTAGATTGAAAAAAATTCTTTGTGTGACTAAAGTTTCTTAAAGCTTCTGAACCTTCTACCAGT\tC\t.\tPASS\tAC=605;AF=0.120807;AFR_AF=0.0431;AMR_AF=0.0735;AN=5008;CS=DEL_pindel;EAS_AF=0.2252;END=88454008;EUR_AF=0.1004;NS=2504;SAS_AF=0.1728;SITEPOST=1;SVTYPE=DEL\tGT\t1|0\n3\t95116192\tDEL_pindel_8783\tACCAACCTGACTTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCCGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGC\tA\t.\tPASS\tAC=2014;AF=0.402157;AFR_AF=0.5915;AMR_AF=0.2003;AN=5008;CS=DEL_pindel;EAS_AF=0.3591;END=95116522;EUR_AF=0.327;MEINFO=AluYb3a1,2,281,-;NS=2504;SAS_AF=0.411;SITEPOST=0.99095;SVTYPE=DEL_ALU\tGT\t0|1\n3\t95465681\tUW_VH_20349\tA\t<CN0>\t100\tPASS\tAC=1119;AF=0.223442;AFR_AF=0.2148;AMR_AF=0.1023;AN=5008;CIEND=0,104;CIPOS=-194,0;CS=DEL_union;EAS_AF=0.2679;END=95470805;EUR_AF=0.2336;MC=SI_BD_3356,BI_GS_DEL1_B5_P0590_438,UW_VH_4186;NS=2504;SAS_AF=0.2648;SVTYPE=DEL\tGT\t0|1\n3\t95465761\tUW_VH_297\tA\t<CN0>\t100\tPASS\tAC=1782;AF=0.355831;AFR_AF=0.3154;AMR_AF=0.1758;AN=5008;CIEND=0,277;CIPOS=-219,0;CS=DEL_union;EAS_AF=0.4177;END=95468120;EUR_AF=0.3797;MC=SI_BD_3357,YL_CN_YRI_971,YL_CN_JPT_811,BI_GS_DEL1_B1_P0590_322,YL_CN_TSI_687,YL_CN_LWK_716,YL_CN_CDX_653,YL_CN_GIH_552,EM_DL_DEL64880,YL_CN_ASW_772;NS=2504;SAS_AF=0.4499;SVTYPE=DEL\tGT\t0|1\n3\t95874517\tALU_umary_ALU_2535\tC\t<INS:ME:ALU>\t.\t.\tAC=683;AF=0.136382;AFR_AF=0.0681;AMR_AF=0.2061;AN=5008;CS=ALU_umary;EAS_AF=0.1329;EUR_AF=0.2038;MEINFO=AluYa5,2,281,+;NS=2504;SAS_AF=0.1135;SITEPOST=1;SVLEN=279;SVTYPE=ALU;TSD=AAGAAATGC\tGT\t1|0\n3\t98410648\tUW_VH_2359\tC\t<CN0>\t100\tPASS\tAC=1795;AF=0.358427;AFR_AF=0.0976;AMR_AF=0.4409;AN=5008;CIEND=0,359;CIPOS=-505,0;CS=DEL_union;EAS_AF=0.4306;END=98414803;EUR_AF=0.4513;MC=BI_GS_DEL1_B2_P0593_299,EM_DL_DEL64985,YL_CN_PEL_681;NS=2504;SAS_AF=0.4826;SVTYPE=DEL\tGT\t0|1\n3\t98899063\tBI_GS_DEL1_B1_P0593_764\tT\t<CN0>\t100\tPASS\tAC=4035;AF=0.805711;AFR_AF=0.7549;AMR_AF=0.8386;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.8452;END=98902396;EUR_AF=0.7803;MC=UW_VH_5333,SI_BD_3375,UW_VH_15599,YL_CN_ACB_843,UW_VH_18302,UW_VH_298,UW_VH_20908,EM_DL_DEL64996,UW_VH_2968;NS=2504;SAS_AF=0.8364;SVTYPE=DEL\tGT\t1|1\n3\t98982423\tDEL_pindel_8892\tTATATATATGATATATATATGATATATATATATCATATATATATCATATATATGATATATATATCATATATATC\tT\t.\tPASS\tAC=2263;AF=0.451877;AFR_AF=0.326;AMR_AF=0.4856;AN=5008;CS=DEL_pindel;EAS_AF=0.5754;END=98982496;EUR_AF=0.501;NS=2504;SAS_AF=0.4202;SITEPOST=0.9922;SVTYPE=DEL\tGT\t1|0\n3\t99037445\tDEL_pindel_8893\tGGAAATTCTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGCGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCTACCACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGATGGGGTTTCACCGTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC\tG\t.\tPASS\tAC=4248;AF=0.848243;AFR_AF=0.8646;AMR_AF=0.8746;AN=5008;CS=DEL_pindel;EAS_AF=0.8472;END=99037757;EUR_AF=0.8539;MEINFO=AluYc1,1,281,-;NS=2504;SAS_AF=0.8027;SITEPOST=0.9943;SVTYPE=DEL_ALU\tGT\t1|1\n3\t99605060\tDEL_pindel_8906\tTTTATCACTATGCTGAGTTCCTGGTGAGAGGGGAATGAGTGTAAAGCAGGGATG\tT\t.\tPASS\tAC=1049;AF=0.209465;AFR_AF=0.2534;AMR_AF=0.2032;AN=5008;CS=DEL_pindel;EAS_AF=0.1528;END=99605113;EUR_AF=0.1839;NS=2504;SAS_AF=0.2393;SITEPOST=0.9977;SVTYPE=DEL\tGT\t1|0\n3\t99628781\tBI_GS_DEL1_B5_P0594_830\tG\t<CN0>\t100\tPASS\tAC=1151;AF=0.229832;AFR_AF=0.084;AMR_AF=0.3429;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.1954;END=99629631;EUR_AF=0.3032;MC=UW_VH_10390,UW_VH_6006,SI_BD_3380,UW_VH_4757,UW_VH_299,UW_VH_11401;NS=2504;SAS_AF=0.3067;SVTYPE=DEL\tGT\t1|1\n3\t99785350\tDEL_pindel_8915\tAGGCTTTGCTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCATTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGT\tA\t.\tPASS\tAC=871;AF=0.173922;AFR_AF=0.1309;AMR_AF=0.2262;AN=5008;CS=DEL_pindel;EAS_AF=0.1488;END=99785656;EUR_AF=0.1918;MEINFO=AluY,19,281,-;NS=2504;SAS_AF=0.2025;SITEPOST=0.9999;SVTYPE=DEL_ALU\tGT\t1|0\n3\t101357527\tBI_GS_DEL1_B3_P0596_16\tC\t<CN0>\t100\tPASS\tAC=750;AF=0.14976;AFR_AF=0.1021;AMR_AF=0.0922;AN=5008;CIEND=-3,3;CIPOS=-3,3;CS=DEL_union;EAS_AF=0.1538;END=101359730;EUR_AF=0.1431;MC=YL_CN_GWD_1049,YL_CN_CEU_910,SI_BD_3384,EM_DL_DEL65052,UW_VH_301,YL_CN_PUR_910;NS=2504;SAS_AF=0.2577;SVTYPE=DEL\tGT\t1|0\n3\t103453396\tALU_umary_ALU_2578\tT\t<INS:ME:ALU>\t.\t.\tAC=1407;AF=0.28095;AFR_AF=0.1581;AMR_AF=0.3674;AN=5008;CS=ALU_umary;EAS_AF=0.1498;EUR_AF=0.5119;MEINFO=AluUndef,1,281,-;NS=2504;SAS_AF=0.2832;SITEPOST=1;SVLEN=280;SVTYPE=ALU;TSD=GAGTAAAATTCTTTTT\tGT\t1|1\n3\t104278168\tBI_GS_DEL1_B1_P0599_199\tT\t<CN0>\t100\tPASS\tAC=1074;AF=0.214457;AFR_AF=0.1399;AMR_AF=0.2911;AN=5008;CIEND=-2,2;CIPOS=-2,2;CS=DEL_union;EAS_AF=0.0933;END=104279030;EUR_AF=0.4006;MC=DEL_pindel_8983;NS=2504;SAS_AF=0.1943;SVTYPE=DEL\tGT\t1|0\n3\t104645425\tDEL_pindel_8986\tGTTAAGATCATGAATAAATGAAAAATTGAAATGGAATTGGGGGCGATAAGCCCAAACTTAAAGGCAAAACTTCATATTTTCTGCTATCTACATAAAAGTGGTAAATCATCATTTCTAACTTTTGATTAACAGATTAACATGCACTAGTCTTTTAATAAATGCTGGTATTTTA\tG\t.\tPASS\tAC=440;AF=0.0878594;AFR_AF=0.003;AMR_AF=0.1585;AN=5008;CS=DEL_pindel;EAS_AF=0.2034;END=104645596;EUR_AF=0.0616;NS=2504;SAS_AF=0.0603;SITEPOST=0.9978;SVTYPE=DEL\tGT\t0|1\n3\t106813625\tDEL_pindel_9010\tAGTTTTTTTTTTTTCTTTTTTTTGTTGTTGTTTTTTTTGTTTTTTTTTTTGTTTTGTTTTTTTTTTTTTTTATTATACTCTAAGTTTTAGGGTACATGTGCACATTGTGCAGGTTAGTTACATATGTATACATGTGCCATGCTGGTGCGCTGCACCCACTAACGT\tA\t.\tPASS\tAC=4964;AF=0.991214;AFR_AF=0.9879;AMR_AF=0.9928;AN=5008;CS=DEL_pindel;EAS_AF=0.9891;END=106813789;EUR_AF=0.994;NS=2504;SAS_AF=0.9939;SITEPOST=1;SVTYPE=DEL\tGT\t1|1\n3\t110271029\tALU_umary_ALU_2610\tA\t<INS:ME:ALU>\t.\t.\tAC=694;AF=0.138578;AFR_AF=0.2791;AMR_AF=0.0706;AN=5008;CS=ALU_umary;EAS_AF=0.0278;EUR_AF=0.1034;MEINFO=AluYa5,12,281,+;NS=2504;SAS_AF=0.1472;SITEPOST=1;SVLEN=269;SVTYPE=ALU;TSD=AAAATTCTTTA\tGT\t0|1\n3\t111226375\tALU_umary_ALU_2616\tA\t<INS:ME:ALU>\t.\t.\tAC=1806;AF=0.360623;AFR_AF=0.1467;AMR_AF=0.4553;AN=5008;CS=ALU_umary;EAS_AF=0.3879;EUR_AF=0.4791;MEINFO=AluYb11,1,276,+;NS=2504;SAS_AF=0.4325;SITEPOST=1;SVLEN=275;SVTYPE=ALU;TSD=AAAAATAAAATCA\tGT\t1|0\n3\t111243593\tBI_GS_CNV_3_111243593_111248855\tT\t<CN0>\t100\tPASS\tAC=1085;AF=0.216653;AFR_AF=0.2867;AMR_AF=0.2478;AN=5008;CIEND=0,500;CIPOS=-500,0;CS=DEL_union;EAS_AF=0.0982;END=111248855;EUR_AF=0.2495;MC=UW_VH_21393,YL_CN_CHB_781,SI_BD_3449,EM_DL_DEL65479,UW_VH_1327;NS=2504;SAS_AF=0.1881;SVTYPE=DEL\tGT\t1|1\n3\t112466720\tSVA_umary_SVA_179\tT\t<INS:ME:SVA>\t.\t.\tAC=435;AF=0.086861;AFR_AF=0.1263;AMR_AF=0.0202;AN=5008;CS=SVA_umary;EAS_AF=0.1012;EUR_AF=0.0457;MEINFO=SVA,28,1627,-;NS=2504;SAS_AF=0.1084;SITEPOST=1;SVLEN=1599;SVTYPE=SVA;TSD=GAGGGAGAGACATATTTTTCTTCCTTTT\tGT\t0|1\n3\t112467382\tDEL_pindel_9101\tAGGGAAGGTAAATATTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCCCGCTGTTTAGCCCAGGCCGGATTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCCTCCCAGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTGTTAGCCAAGATGGTCTCGATCTCCTGACCTTGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCAGCC\tA\t.\tPASS\tAC=3052;AF=0.609425;AFR_AF=0.593;AMR_AF=0.6239;AN=5008;CS=DEL_pindel;EAS_AF=0.6101;END=112467712;EUR_AF=0.6034;MEINFO=AluYb,1,281,-;NS=2504;SAS_AF=0.6268;SITEPOST=0.9789;SVTYPE=DEL_ALU\tGT\t0|1\n3\t113854021\tDEL_pindel_9123\tTGATATTTGTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCGGGCCGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCGCGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCTTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC\tT\t.\tPASS\tAC=4518;AF=0.902157;AFR_AF=0.8525;AMR_AF=0.9164;AN=5008;CS=DEL_pindel;EAS_AF=0.9375;END=113854347;EUR_AF=0.9215;MEINFO=AluYb6_2,1,281,-;NS=2504;SAS_AF=0.9029;SITEPOST=0.9997;SVTYPE=DEL_ALU\tGT\t1|1\n3\t114466474\tDEL_pindel_9135\tACAAGATTGAGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGAGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCCAGGGGGCGGAGCCTGCAGTGAGCCGAGATTGCGCCACTGCACTCCAGCCTGGGCGACAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAC\tA\t.\tPASS\tAC=3593;AF=0.717452;AFR_AF=0.6309;AMR_AF=0.7378;AN=5008;CS=DEL_pindel;EAS_AF=0.7371;END=114466798;EUR_AF=0.7525;MEINFO=AluYe,1,281,+;NS=2504;SAS_AF=0.7638;SITEPOST=0.9454;SVTYPE=DEL_ALU\tGT\t0|1\n3\t116204836\tBI_GS_DEL1_B3_P0611_6\tC\t<CN0>\t100\tPASS\tAC=1227;AF=0.245008;AFR_AF=0.1868;AMR_AF=0.1441;AN=5008;CIEND=0,1;CIPOS=0,1;CS=DEL_union;EAS_AF=0.4454;END=116205180;EUR_AF=0.1998;MC=UW_VH_1395;NS=2504;SAS_AF=0.2352;SVTYPE=DEL\tGT\t1|1\n3\t116275271\tDEL_pindel_9156\tTAAAAAATCTTCAGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGAGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCCAGGGGGCGGAGCCTGCAGTGAGCCGAGATTGCGCCACTGCACTCCAGCCTGGGCGACAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA\tT\t.\tPASS\tAC=4568;AF=0.912141;AFR_AF=0.8684;AMR_AF=0.9265;AN=5008;CS=DEL_pindel;EAS_AF=0.9474;END=116275595;EUR_AF=0.9205;MEINFO=AluYe,1,281,+;NS=2504;SAS_AF=0.9162;SITEPOST=1;SVTYPE=DEL_ALU\tGT\t1|1\n3\t118281607\tBI_GS_DEL1_B5_P0613_350\tG\t<CN0>\t100\tPASS\tAC=3447;AF=0.688299;AFR_AF=0.3525;AMR_AF=0.7709;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.8373;END=118281829;EUR_AF=0.7913;MC=UW_VH_24779;NS=2504;SAS_AF=0.8241;SVTYPE=DEL\tGT\t1|1\n3\t119419835\tBI_GS_DEL1_B4_P0614_99\tG\t<CN0>\t100\tPASS\tAC=789;AF=0.157548;AFR_AF=0.1316;AMR_AF=0.2089;AN=5008;CIEND=-13,13;CIPOS=-13,13;CS=DEL_union;EAS_AF=0.1696;END=119420548;EUR_AF=0.1382;NS=2504;SAS_AF=0.1636;SVTYPE=DEL\tGT\t1|0\n3\t119419882\tBI_GS_DEL1_B5_P0614_562\tA\t<CN0>\t100\tPASS\tAC=917;AF=0.183107;AFR_AF=0.1672;AMR_AF=0.2392;AN=5008;CIEND=-3,3;CIPOS=-3,3;CS=DEL_union;EAS_AF=0.1825;END=119420336;EUR_AF=0.1461;MC=UW_VH_1726;NS=2504;SAS_AF=0.2035;SVTYPE=DEL\tGT\t1|0\n3\t119893984\tBI_GS_DEL1_B4_P0614_212\tA\t<CN0>\t100\tPASS\tAC=4468;AF=0.892173;AFR_AF=0.8676;AMR_AF=0.9193;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.9266;END=119894448;EUR_AF=0.9245;NS=2504;SAS_AF=0.8374;SVTYPE=DEL\tGT\t0|1\n3\t122138442\tDEL_pindel_9246\tTAGAAATGAAGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCATGAGGTCAAGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGCGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCCGGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAA\tT\t.\tPASS\tAC=2191;AF=0.4375;AFR_AF=0.3419;AMR_AF=0.3775;AN=5008;CS=DEL_pindel;EAS_AF=0.5496;END=122138768;EUR_AF=0.493;MEINFO=AluYb6_2,1,281,+;NS=2504;SAS_AF=0.4366;SITEPOST=0.9961;SVTYPE=DEL_ALU\tGT\t0|1\n3\t123236746\tDEL_pindel_9285\tTAAAAATATTTGGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTGGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAA\tT\t.\tPASS\tAC=4055;AF=0.809704;AFR_AF=0.6861;AMR_AF=0.8516;AN=5008;CS=DEL_pindel;EAS_AF=0.8829;END=123237061;EUR_AF=0.8469;MEINFO=AluYa5b1,1,281,+;NS=2504;SAS_AF=0.8333;SITEPOST=0.98305;SVTYPE=DEL_ALU\tGT\t1|1\n3\t124808631\tALU_umary_ALU_2685\tC\t<INS:ME:ALU>\t.\t.\tAC=1873;AF=0.374002;AFR_AF=0.3495;AMR_AF=0.353;AN=5008;CS=ALU_umary;EAS_AF=0.4554;EUR_AF=0.3141;MEINFO=AluUndef,1,267,-;NS=2504;SAS_AF=0.3998;SITEPOST=1;SVLEN=266;SVTYPE=ALU;TSD=TC\tGT\t1|1\n3\t124936320\tSI_BD_3505\tT\t<CN0>\t100\tPASS\tAC=1776;AF=0.354633;AFR_AF=0.2958;AMR_AF=0.3833;AN=5008;CIEND=-170,322;CIPOS=-322,97;CS=DEL_union;EAS_AF=0.2708;END=124937213;EUR_AF=0.4473;MC=EM_DL_DEL10719024;NS=2504;SAS_AF=0.4049;SVTYPE=DEL\tGT\t1|1\n3\t125672301\tBI_GS_DEL1_B4_P0620_120\tT\t<CN0>\t100\tPASS\tAC=1185;AF=0.236621;AFR_AF=0.4909;AMR_AF=0.1686;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.0833;END=125676371;EUR_AF=0.2078;MC=YL_CN_ASW_794,SI_BD_3512,EM_DL_DEL65846,YL_CN_LWK_739,UW_VH_1396;NS=2504;SAS_AF=0.1288;SVTYPE=DEL\tGT\t1|1\n3\t126090202\tSVA_umary_SVA_182\tT\t<INS:ME:SVA>\t.\t.\tAC=1635;AF=0.326478;AFR_AF=0.4032;AMR_AF=0.2522;AN=5008;CS=SVA_umary;EAS_AF=0.252;EUR_AF=0.3738;MEINFO=SVA,732,1627,+;NS=2504;SAS_AF=0.3037;SITEPOST=1;SVLEN=895;SVTYPE=SVA;TSD=AGAAGGAGCTGTCTT\tGT\t1|1\n3\t126358922\tDEL_pindel_9329\tAGCTGCTTGTGTTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGCGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTTTTAGTAGAGACGGGGTTTCACCGTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC\tA\t.\tPASS\tAC=2952;AF=0.589457;AFR_AF=0.5144;AMR_AF=0.6873;AN=5008;CS=DEL_pindel;EAS_AF=0.5427;END=126359249;EUR_AF=0.6889;MEINFO=AluYa1_1,1,281,-;NS=2504;SAS_AF=0.5675;SITEPOST=0.9888;SVTYPE=DEL_ALU\tGT\t1|1\n3\t128672140\tYL_CN_PJL_793\tC\t<CN0>\t100\tPASS\tAC=3863;AF=0.771366;AFR_AF=0.826;AMR_AF=0.7622;AN=5008;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0.8433;END=128675334;EUR_AF=0.7078;NS=2504;SAS_AF=0.6953;SVTYPE=DEL\tGT\t1|1\n3\t129938434\tALU_umary_ALU_2701\tC\t<INS:ME:ALU>\t.\t.\tAC=3577;AF=0.714257;AFR_AF=0.6225;AMR_AF=0.7651;AN=5008;CS=ALU_umary;EAS_AF=0.754;EUR_AF=0.7565;MEINFO=AluUndef,1,277,+;NS=2504;SAS_AF=0.7178;SITEPOST=1;SVLEN=276;SVTYPE=ALU;TSD=AAATAAAGAATGAATGGGAGC\tGT\t1|1\n3\t131708252\tUW_VH_2783\tC\t<CN0>\t100\tPASS\tAC=1384;AF=0.276358;AFR_AF=0.028;AMR_AF=0.4452;AN=5008;CIEND=0,383;CIPOS=-398,0;CS=DEL_union;EAS_AF=0.3512;END=131713384;EUR_AF=0.333;MC=UW_VH_315,EM_DL_DEL66330,YL_CN_IBS_657,BI_GS_DEL1_B1_P0626_731;NS=2504;SAS_AF=0.3569;SVTYPE=DEL\tGT\t0|1\n3\t131989128\tDUP_gs_CNV_3_131989128_131994876\tT\t<CN0>,<CN2>\t.\tPASS\tAC=1161,1;AF=0.231829,0.00019968;AFR_AF=0.1241,0.0008;AMR_AF=0.3602,0;AN=5008;CS=DUP_gs;EAS_AF=0.2569,0;END=131994876;EUR_AF=0.2704,0;MC=EM_DL_DEL66527,BI_GS_DEL1_B4_P0626_238,UW_VH_9903,UW_VH_14285,UW_VH_21178,UW_VH_316,UW_VH_15716,YL_CN_GIH_579,SI_BD_3556,UW_VH_4238;NS=2504;SAS_AF=0.2209,0;SITEPOST=1;SVTYPE=CNV\tGT\t0|1\n3\t134673902\tDEL_pindel_9520\tTGACATCCTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAATTTTTTTTTTTTTAATTATACTCTAAGTTTTAGGGTACATGTGCACATTGTGCAGGTTAGTTACATATGTATACATGTGCCATGCTGGTGCGCTGCACCCACTAACGTGTCATCTAGCATTAGGTATATCTCCCAATGCTATCCCTCCCCCCTCCCCCAACCCCACCACAGTCCCCAGAGTGTGATATTCCCCTTCCTGTGTCCATGTGATCTCATTGTTCAATTCCCACCTATGAGTGAGAATATGCGGTGTTTGGTTTTTTGTTCTTGCGATAGTTTACTGAGAATGATGGTTTCCAATTTCATCCATGTCCCTACAAAGGACATGAACTCATCATTTTTTATGGCTGCATAGTATTCCATGGTGTATATGTGCCACATTTTCTTAATCCAGTCTATCATTGTTGGACATTTGGTGGGACTGTAAACTAGTTCAACCATTGTGGAAGTCAGTGTGGCGATTCCTCAGGGATCTAGAACTAGAAATACCATTTGACCCAGCCATCCCATTACTGGGTATATACCCAAAGGACTATAAATCATGCTGCTATAAAGACACATGCACACGTATGTTTATTGCGGCACTATTCACAATAGCAAAGACTTGG\tT\t.\tPASS\tAC=2066;AF=0.41254;AFR_AF=0.5318;AMR_AF=0.4813;AN=5008;CS=DEL_pindel;EAS_AF=0.2024;END=134674555;EUR_AF=0.3926;NS=2504;SAS_AF=0.4397;SITEPOST=0.9972;SVTYPE=DEL\tGT\t1|0\n3\t139425868\tDEL_pindel_9603\tGAGAGAGGACGCAGACAAGAGTTTTGGGAAGATTTCTGACATCTGTGAGGGGAAGGCTT\tG\t.\tPASS\tAC=1231;AF=0.245807;AFR_AF=0.0908;AMR_AF=0.2839;AN=5008;CS=DEL_pindel;EAS_AF=0.378;END=139425926;EUR_AF=0.2266;NS=2504;SAS_AF=0.3119;SITEPOST=0.9975;SVTYPE=DEL\tGT\t0|1\n3\t144687884\tALU_umary_ALU_2769\tT\t<INS:ME:ALU>\t.\t.\tAC=1968;AF=0.392971;AFR_AF=0.3805;AMR_AF=0.415;AN=5008;CS=ALU_umary;EAS_AF=0.3879;EUR_AF=0.4364;MEINFO=AluYc1,20,281,-;NS=2504;SAS_AF=0.3548;SITEPOST=1;SVLEN=261;SVTYPE=ALU;TSD=TGGTTTGTAATTTATT\tGT\t1|0\n3\t144693110\tDEL_pindel_9705\tCTGGAAGGCGGTTGATTAGGCCTGGTTAGAACCCTTCACTAAGCTGCTAAGAATGGGTACTGGGACTGAGAGCTTATGCTAAGCACTTTGGGCCAGGCATTTCAAATCTTTTGATGAGCTCTTGAGG\tC\t.\tPASS\tAC=2971;AF=0.593251;AFR_AF=0.5734;AMR_AF=0.6657;AN=5008;CS=DEL_pindel;EAS_AF=0.5675;END=144693236;EUR_AF=0.668;NS=2504;SAS_AF=0.5184;SITEPOST=0.9999;SVTYPE=DEL\tGT\t1|1\n3\t144888422\tBI_GS_DEL1_B2_P0639_601\tG\t<CN0>\t100\tPASS\tAC=1246;AF=0.248802;AFR_AF=0.1021;AMR_AF=0.3646;AN=5008;CIEND=-1,1;CIPOS=-1,1;CS=DEL_union;EAS_AF=0.1657;END=144888910;EUR_AF=0.4453;NS=2504;SAS_AF=0.2485;SVTYPE=DEL\tGT\t0|1\n3\t145069463\tALU_umary_ALU_2770\tT\t<INS:ME:ALU>\t.\t.\tAC=400;AF=0.0798722;AFR_AF=0.0605;AMR_AF=0.0634;AN=5008;CS=ALU_umary;EAS_AF=0.1161;EUR_AF=0.1024;MEINFO=AluUndef,13,281,-;NS=2504;SAS_AF=0.0573;SITEPOST=1;SVLEN=268;SVTYPE=ALU;TSD=AAAAATAATGTCACTGT\tGT\t1|0\n3\t146385228\tEM_DL_DEL66886\tT\t<CN0>\t100\tPASS\tAC=3504;AF=0.699681;AFR_AF=0.8457;AMR_AF=0.6988;AN=5008;CIEND=-150,150;CIPOS=-150,150;CS=DEL_union;EAS_AF=0.503;END=146390409;EUR_AF=0.673;MC=YL_CN_MXL_645,YL_CN_CEU_952;NS=2504;SAS_AF=0.7331;SVTYPE=DEL\tGT\t1|0\n3\t148566792\tDEL_pindel_9765\tTAGACCTCTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCCGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCGCTTCCCGGGTTCAAGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCACCCACCACCGCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC\tT\t.\tPASS\tAC=4354;AF=0.869409;AFR_AF=0.8903;AMR_AF=0.8501;AN=5008;CS=DEL_pindel;EAS_AF=0.8433;END=148567110;EUR_AF=0.8857;MEINFO=AluYb6_2,1,281,-;NS=2504;SAS_AF=0.865;SITEPOST=0.9849;SVTYPE=DEL_ALU\tGT\t1|1\n3\t148844372\tDEL_pindel_9771\tTAAGATGCAAAAATAGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA\tT\t.\tPASS\tAC=3377;AF=0.674321;AFR_AF=0.7844;AMR_AF=0.7046;AN=5008;CS=DEL_pindel;EAS_AF=0.5942;END=148844700;EUR_AF=0.6581;MEINFO=AluYa4_5,1,281,+;NS=2504;SAS_AF=0.6033;SITEPOST=0.98225;SVTYPE=DEL_ALU\tGT\t1|1\n3\t151503209\tDEL_pindel_9823\tAATACATATACATATACATATACATATACATATACATATACATATACATATACATATACAT\tA\t.\tPASS\tAC=1281;AF=0.255791;AFR_AF=0.32;AMR_AF=0.2464;AN=5008;CS=DEL_pindel;EAS_AF=0.2202;END=151503269;EUR_AF=0.2227;NS=2504;SAS_AF=0.2464;SITEPOST=0.9997;SVTYPE=DEL\tGT\t0|1\n3\t151748850\tALU_umary_ALU_2810\tG\t<INS:ME:ALU>\t.\t.\tAC=1074;AF=0.214457;AFR_AF=0.1755;AMR_AF=0.1801;AN=5008;CS=ALU_umary;EAS_AF=0.2907;EUR_AF=0.2614;MEINFO=AluYi6,1,280,+;NS=2504;SAS_AF=0.1646;SITEPOST=1;SVLEN=279;SVTYPE=ALU;TSD=AAGAATAGCTTAACATG\tGT\t1|0\n3\t152053972\tALU_umary_ALU_2814\tG\t<INS:ME:ALU>\t.\t.\tAC=158;AF=0.0315495;AFR_AF=0.0068;AMR_AF=0.0504;AN=5008;CS=ALU_umary;EAS_AF=0.001;EUR_AF=0.0845;MEINFO=AluYa5,72,281,+;NS=2504;SAS_AF=0.0286;SITEPOST=1;SVLEN=209;SVTYPE=ALU;TSD=AAAAATGTAATCTG\tGT\t1|0\n3\t156092162\tUW_VH_10429\tA\t<CN0>\t100\tPASS\tAC=1204;AF=0.240415;AFR_AF=0.5492;AMR_AF=0.1398;AN=5008;CIEND=0,455;CIPOS=-471,0;CS=DEL_union;EAS_AF=0.0486;END=156093688;EUR_AF=0.1829;MC=EM_DL_DEL10730943,UW_VH_2025,BI_GS_DEL1_B5_P0651_142,YL_CN_IBS_675,UW_VH_6652,YL_CN_GWD_1109;NS=2504;SAS_AF=0.1513;SVTYPE=DEL\tGT\t0|1\n3\t158350719\tBI_GS_DEL1_B5_P0653_351\tT\t<CN0>\t100\tPASS\tAC=1803;AF=0.360024;AFR_AF=0.23;AMR_AF=0.3876;AN=5008;CIEND=0,1;CIPOS=0,1;CS=DEL_union;EAS_AF=0.6151;END=158351910;EUR_AF=0.33;MC=YL_CN_GIH_595,YL_CN_KHV_831,YL_CN_ACB_901,YL_CN_STU_786,YL_CN_JPT_865,YL_CN_IBS_676,YL_CN_GWD_1110,SI_BD_3664,EM_DL_DEL10731763,YL_CN_CHS_793;NS=2504;SAS_AF=0.2843;SVTYPE=DEL\tGT\t1|1\n3\t159257018\tBI_GS_DEL1_B5_P0654_313\tA\t<CN0>\t100\tPASS\tAC=1259;AF=0.251398;AFR_AF=0.1097;AMR_AF=0.2478;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.4167;END=159257691;EUR_AF=0.2803;MC=UW_VH_327;NS=2504;SAS_AF=0.2454;SVTYPE=DEL\tGT\t1|0\n3\t159428985\tDEL_pindel_9982\tTAAGAAATTTAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA\tT\t.\tPASS\tAC=1373;AF=0.274161;AFR_AF=0.4917;AMR_AF=0.2767;AN=5008;CS=DEL_pindel;EAS_AF=0.2014;END=159429184;EUR_AF=0.1362;MEINFO=AluY,119,281,+;NS=2504;SAS_AF=0.1953;SITEPOST=0.9977;SVTYPE=DEL_ALU\tGT\t1|0\n3\t161246712\tDEL_pindel_10014\tCAGAATGTGTCATTCCTGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA\tC\t.\tPASS\tAC=2356;AF=0.470447;AFR_AF=0.5416;AMR_AF=0.4222;AN=5008;CS=DEL_pindel;EAS_AF=0.3452;END=161247047;EUR_AF=0.4423;MEINFO=AluYa5,1,281,+;NS=2504;SAS_AF=0.5665;SITEPOST=0.9968;SVTYPE=DEL_ALU\tGT\t1|0\n3\t162408296\tDEL_pindel_10042\tCTATGTTTCTGTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGCGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGCGTAGCTGGGACTACAGGCGCCCGCCACCACGCCCGGCTAATTTTTTTGTGTGTTTTTTAGTAGAGACGGGGTTTCACTGTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCCT\tC\t.\tPASS\tAC=3576;AF=0.714058;AFR_AF=0.7481;AMR_AF=0.7061;AN=5008;CS=DEL_pindel;EAS_AF=0.7341;END=162408612;EUR_AF=0.673;MEINFO=AluYf1,1,281,-;NS=2504;SAS_AF=0.6953;SITEPOST=0.9463;SVTYPE=DEL_ALU\tGT\t1|1\n3\t162512202\tBI_GS_CNV_3_162512202_162525833\tG\t<CN0>\t100\tPASS\tAC=2532;AF=0.505591;AFR_AF=0.5287;AMR_AF=0.4409;AN=5008;CIEND=0,500;CIPOS=-500,0;CS=DEL_union;EAS_AF=0.8929;END=162525833;EUR_AF=0.2843;MC=UW_VH_3184,UW_VH_13729,SI_BD_3678,EM_DL_DEL67207,BI_GS_DEL2_B1_P0132_1,YL_CN_MSL_719;NS=2504;SAS_AF=0.3487;SVTYPE=DEL\tGT\t1|1\n3\t162514471\tDUP_uwash_chr3_162514470_162625647\tT\t<CN0>\t.\tPASS\tAC=2532;AF=0.505591;AFR_AF=0.5287;AMR_AF=0.4409;AN=5008;CS=DUP_uwash;EAS_AF=0.8929;END=162625647;EUR_AF=0.2843;NS=2504;SAS_AF=0.3487;SITEPOST=1;SVTYPE=DEL\tGT\t1|1\n3\t162525834\tBI_GS_CNV_3_162525834_162545193\tT\t<CN0>\t100\tPASS\tAC=3623;AF=0.723442;AFR_AF=0.6021;AMR_AF=0.7378;AN=5008;CIEND=0,500;CIPOS=-500,0;CS=DEL_union;EAS_AF=0.9226;END=162545193;EUR_AF=0.6869;NS=2504;SAS_AF=0.7096;SVTYPE=DEL\tGT\t1|1\n3\t162558858\tBI_GS_CNV_3_162558858_162601552\tC\t<CN0>\t100\tPASS\tAC=2532;AF=0.505591;AFR_AF=0.5287;AMR_AF=0.4409;AN=5008;CIEND=0,500;CIPOS=-500,0;CS=DEL_union;EAS_AF=0.8929;END=162601552;EUR_AF=0.2843;MC=UW_VH_3184,UW_VH_13729,SI_BD_3678,EM_DL_DEL67207,BI_GS_DEL2_B1_P0132_1,YL_CN_MSL_719;NS=2504;SAS_AF=0.3487;SVTYPE=DEL\tGT\t1|1\n3\t162764905\tUW_VH_2550\tT\t<CN0>\t100\tPASS\tAC=4173;AF=0.833267;AFR_AF=0.7769;AMR_AF=0.8372;AN=5008;CIEND=0,607;CIPOS=-515,0;CS=DEL_union;EAS_AF=0.9812;END=162769085;EUR_AF=0.7296;MC=SI_BD_3679,EM_DL_DEL67212,YL_CN_MSL_722;NS=2504;SAS_AF=0.8609;SVTYPE=DEL\tGT\t1|1\n3\t163464167\tDEL_pindel_10072\tAGCATTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGCGATCTCGGCTCACTGCAAGCTCCGCCTCCTGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCACCCGCTACCACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC\tA\t.\tPASS\tAC=4184;AF=0.835463;AFR_AF=0.8691;AMR_AF=0.8386;AN=5008;CS=DEL_pindel;EAS_AF=0.7788;END=163464473;EUR_AF=0.8191;MEINFO=AluYc2,1,281,-;NS=2504;SAS_AF=0.863;SITEPOST=0.9997;SVTYPE=DEL_ALU\tGT\t0|1\n3\t166362314\tALU_umary_ALU_2890\tG\t<INS:ME:ALU>\t.\t.\tAC=1578;AF=0.315096;AFR_AF=0.531;AMR_AF=0.232;AN=5008;CS=ALU_umary;EAS_AF=0.1935;EUR_AF=0.3022;MEINFO=AluYa4_5,1,281,+;NS=2504;SAS_AF=0.2209;SITEPOST=1;SVLEN=280;SVTYPE=ALU;TSD=AAAAAGGGGG\tGT\t0|1\n3\t168199075\tALU_umary_ALU_2905\tT\t<INS:ME:ALU>\t.\t.\tAC=507;AF=0.101238;AFR_AF=0.0598;AMR_AF=0.2147;AN=5008;CS=ALU_umary;EAS_AF=0.1399;EUR_AF=0.0736;MEINFO=AluYa5,3,281,-;NS=2504;SAS_AF=0.0654;SITEPOST=1;SVLEN=278;SVTYPE=ALU;TSD=CATGCCTGACTCT\tGT\t0|1\n3\t168738458\tBI_GS_DEL1_B5_P0663_823\tA\t<CN0>\t100\tPASS\tAC=1563;AF=0.312101;AFR_AF=0.1664;AMR_AF=0.353;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.2808;END=168738838;EUR_AF=0.5169;MC=DEL_pindel_10164,UW_VH_329;NS=2504;SAS_AF=0.3016;SVTYPE=DEL\tGT\t1|1\n3\t169474323\tALU_umary_ALU_2913\tG\t<INS:ME:ALU>\t.\t.\tAC=892;AF=0.178115;AFR_AF=0.0204;AMR_AF=0.1585;AN=5008;CS=ALU_umary;EAS_AF=0.3125;EUR_AF=0.2555;MEINFO=AluUndef,1,275,+;NS=2504;SAS_AF=0.1871;SITEPOST=1;SVLEN=274;SVTYPE=ALU;TSD=AAGACTTGAGG\tGT\t1|1\n3\t173268419\tDEL_pindel_10240\tTAACCTGCAATGTCTTTTTGAGACCATTAGACAGCTACTTACTGAAGTTAATTTTACTA\tT\t.\tPASS\tAC=1520;AF=0.303514;AFR_AF=0.3313;AMR_AF=0.2493;AN=5008;CS=DEL_pindel;EAS_AF=0.374;END=173268477;EUR_AF=0.2256;NS=2504;SAS_AF=0.3119;SITEPOST=0.9966;SVTYPE=DEL\tGT\t1|0\n3\t177381336\tSI_BD_3759\tC\t<CN0>\t100\tPASS\tAC=411;AF=0.0820687;AFR_AF=0.143;AMR_AF=0.0865;AN=5008;CIEND=-50,204;CIPOS=-204,50;CS=DEL_union;EAS_AF=0.002;END=177385447;EUR_AF=0.1143;MC=BI_GS_DEL1_B2_P0672_236,YL_CN_ITU_806,UW_VH_2732;NS=2504;SAS_AF=0.046;SVTYPE=DEL\tGT\t1|0\n3\t177896496\tDEL_pindel_10305\tTTAACACATAACAGAAAAATAAATACTGCATGATCTCACTTGTAAGTGGGAGCTAAACA\tT\t.\tPASS\tAC=2381;AF=0.475439;AFR_AF=0.5333;AMR_AF=0.5303;AN=5008;CS=DEL_pindel;EAS_AF=0.2798;END=177896554;EUR_AF=0.5358;NS=2504;SAS_AF=0.498;SITEPOST=0.9997;SVTYPE=DEL\tGT\t1|1\n3\t178550124\tSI_BD_3769\tA\t<CN0>\t100\tPASS\tAC=2916;AF=0.582268;AFR_AF=0.9289;AMR_AF=0.5231;AN=5008;CIEND=-55,307;CIPOS=-307,58;CS=DEL_union;EAS_AF=0.2232;END=178550897;EUR_AF=0.5825;MC=DEL_pindel_10313;NS=2504;SAS_AF=0.5256;SVTYPE=DEL\tGT\t1|1\n3\t178567629\tBI_GS_DEL1_B5_P0673_746\tA\t<CN0>\t100\tPASS\tAC=619;AF=0.123602;AFR_AF=0.0598;AMR_AF=0.1427;AN=5008;CIEND=-1,1;CIPOS=-1,1;CS=DEL_union;EAS_AF=0.0377;END=178568339;EUR_AF=0.2744;MC=UW_VH_2198,DEL_pindel_10314;NS=2504;SAS_AF=0.1299;SVTYPE=DEL\tGT\t1|0\n3\t179654342\tBI_GS_DEL1_B5_P0674_770\tT\t<CN0>\t100\tPASS\tAC=2672;AF=0.533546;AFR_AF=0.5499;AMR_AF=0.4597;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.6478;END=179654808;EUR_AF=0.502;MC=UW_VH_332,DEL_pindel_10331;NS=2504;SAS_AF=0.4785;SVTYPE=DEL\tGT\t0|1\n3\t180091672\tL1_umary_LINE1_758\tG\t<INS:ME:LINE1>\t.\t.\tAC=1332;AF=0.265974;AFR_AF=0.1906;AMR_AF=0.3156;AN=5008;CS=L1_umary;EAS_AF=0.3571;EUR_AF=0.1909;MEINFO=LINE1,5556,5853,+;NS=2504;SAS_AF=0.316;SITEPOST=1;SVLEN=297;SVTYPE=LINE1;TSD=null\tGT\t1|1\n3\t183876797\tBI_GS_DEL1_B2_P0678_532\tC\t<CN0>\t100\tPASS\tAC=2572;AF=0.513578;AFR_AF=0.5545;AMR_AF=0.3689;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.5367;END=183877385;EUR_AF=0.4742;MC=UW_VH_10;NS=2504;SAS_AF=0.5777;SVTYPE=DEL\tGT\t0|1\n3\t185017328\tDEL_pindel_10410\tTCTCTCTCTCTCTCTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCCGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC\tT\t.\tPASS\tAC=2955;AF=0.590056;AFR_AF=0.5295;AMR_AF=0.5865;AN=5008;CS=DEL_pindel;EAS_AF=0.6022;END=185017653;EUR_AF=0.669;MEINFO=AluYb5,1,281,-;NS=2504;SAS_AF=0.5808;SITEPOST=0.9952;SVTYPE=DEL_ALU\tGT\t1|0\n3\t186826655\tDEL_pindel_10452\tTAAAATTTGTTGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGAGAGGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAA\tT\t.\tPASS\tAC=2671;AF=0.533347;AFR_AF=0.5998;AMR_AF=0.4625;AN=5008;CS=DEL_pindel;EAS_AF=0.5486;END=186826969;EUR_AF=0.4195;MEINFO=AluYa1_1,1,281,+;NS=2504;SAS_AF=0.5951;SITEPOST=0.996;SVTYPE=DEL_ALU\tGT\t1|1\n3\t188304831\tDEL_pindel_10478\tTAAAGAAAGTTGGCGCTCTGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGCGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCCGGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAA\tT\t.\tPASS\tAC=3760;AF=0.750799;AFR_AF=0.7148;AMR_AF=0.8069;AN=5008;CS=DEL_pindel;EAS_AF=0.753;END=188305164;EUR_AF=0.7903;MEINFO=AluYb6_2,1,281,+;NS=2504;SAS_AF=0.7168;SITEPOST=0.9648;SVTYPE=DEL_ALU\tGT\t0|1\n3\t189575894\tDEL_pindel_10497\tTAAGAAAATGTTGTGTATAGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGAGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCCAGGGGGCGGAGCCTGCAGTGAGCCGAGATTGCGCCACTGCACTCCAGCCTGGGCGACAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAA\tT\t.\tPASS\tAC=2524;AF=0.503994;AFR_AF=0.5454;AMR_AF=0.4409;AN=5008;CS=DEL_pindel;EAS_AF=0.4643;END=189576216;EUR_AF=0.5318;MEINFO=AluYe,1,281,+;NS=2504;SAS_AF=0.5051;SITEPOST=0.9986;SVTYPE=DEL_ALU\tGT\t1|0\n3\t189737175\tYL_CN_CHS_825\tA\t<CN0>\t100\tPASS\tAC=1515;AF=0.302516;AFR_AF=0.1717;AMR_AF=0.2954;AN=5008;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0.4216;END=189740648;EUR_AF=0.3052;MC=UW_VH_9400,UW_VH_5690,UW_VH_13324,EM_DL_DEL68016,UW_VH_4879,UW_VH_25412,BI_GS_DEL1_B1_P0684_661,UW_VH_1403,UW_VH_3044,UW_VH_12512;NS=2504;SAS_AF=0.3589;SVTYPE=DEL\tGT\t0|1\n3\t189955408\tDEL_pindel_10508\tACCTGTGTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACCACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGC\tA\t.\tPASS\tAC=1544;AF=0.308307;AFR_AF=0.3896;AMR_AF=0.3112;AN=5008;CS=DEL_pindel;EAS_AF=0.3988;END=189955709;EUR_AF=0.2465;MEINFO=AluYa4_3,2,281,-;NS=2504;SAS_AF=0.1667;SITEPOST=0.9992;SVTYPE=DEL_ALU\tGT\t0|1\n3\t190290639\tDEL_pindel_10515\tTAATGCTTTGTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTTCTGGGATTACAGGCGTGAG\tT\t.\tPASS\tAC=1621;AF=0.323682;AFR_AF=0.4244;AMR_AF=0.3501;AN=5008;CS=DEL_pindel;EAS_AF=0.1151;END=190290936;EUR_AF=0.4066;MEINFO=AluY,16,281,-;NS=2504;SAS_AF=0.2986;SITEPOST=0.9996;SVTYPE=DEL_ALU\tGT\t0|1\n3\t190478458\tDEL_pindel_10518\tTGCTATGGTATAAAGTCATGGTGTTAGCAGGGCTGATTCTCTCTGAAGGTTCTGGAAAAGAATTGATTTCCTTGGATTTCCTGCTCTTAGAGGCTATCTGAATACATTGACTAGTGACTCCTTCCTCCATCAAAAACGTGTAATTTCGTTCTCTGATTTCATCATTACATGGCCTTC\tT\t.\tPASS\tAC=2843;AF=0.567692;AFR_AF=0.5582;AMR_AF=0.5101;AN=5008;CS=DEL_pindel;EAS_AF=0.6339;END=190478634;EUR_AF=0.4533;NS=2504;SAS_AF=0.6708;SITEPOST=0.9998;SVTYPE=DEL\tGT\t1|1\n3\t190999464\tALU_umary_ALU_3022\tC\t<INS:ME:ALU>\t.\t.\tAC=1740;AF=0.347444;AFR_AF=0.1437;AMR_AF=0.4121;AN=5008;CS=ALU_umary;EAS_AF=0.4107;EUR_AF=0.4692;MEINFO=AluUndef,1,281,-;NS=2504;SAS_AF=0.3865;SITEPOST=1;SVLEN=280;SVTYPE=ALU;TSD=TGTACTCTATTTTC\tGT\t1|0\n3\t191064690\tUW_VH_339\tC\t<CN0>\t100\tPASS\tAC=695;AF=0.138778;AFR_AF=0.0991;AMR_AF=0.2493;AN=5008;CIEND=0,378;CIPOS=-396,0;CS=DEL_union;EAS_AF=0;END=191071659;EUR_AF=0.2584;MC=BI_GS_DEL1_B2_P0686_44,UW_VH_4801,SI_BD_3848,EM_DL_DEL68031,YL_CN_ACB_935;NS=2504;SAS_AF=0.1339;SVTYPE=DEL\tGT\t1|0\n3\t191856085\tDEL_pindel_10540\tTGAAAACCTTTGAGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGCGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCCGGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA\tT\t.\tPASS\tAC=3019;AF=0.602835;AFR_AF=0.466;AMR_AF=0.6484;AN=5008;CS=DEL_pindel;EAS_AF=0.6131;END=191856423;EUR_AF=0.7008;MEINFO=AluYb6_2,1,281,+;NS=2504;SAS_AF=0.6442;SITEPOST=0.9929;SVTYPE=DEL_ALU\tGT\t0|1\n3\t191889929\tUW_VH_1733\tG\t<CN0>\t100\tPASS\tAC=170;AF=0.0339457;AFR_AF=0.0083;AMR_AF=0.0504;AN=5008;CIEND=0,370;CIPOS=-332,0;CS=DEL_union;EAS_AF=0.0317;END=191891307;EUR_AF=0.0517;MC=EM_DL_DEL10745257,BI_GS_DEL1_B3_P0686_49,YL_CN_FIN_795;NS=2504;SAS_AF=0.0409;SVTYPE=DEL\tGT\t0|1\n3\t192045380\tALU_umary_ALU_3031\tC\t<INS:ME:ALU>\t.\t.\tAC=677;AF=0.135184;AFR_AF=0.0915;AMR_AF=0.1326;AN=5008;CS=ALU_umary;EAS_AF=0.1885;EUR_AF=0.1004;MEINFO=AluUndef,3,281,+;NS=2504;SAS_AF=0.1769;SITEPOST=1;SVLEN=278;SVTYPE=ALU;TSD=null\tGT\t1|0\n3\t192875329\tEM_DL_DEL68191\tT\t<CN0>\t100\tPASS\tAC=3467;AF=0.692292;AFR_AF=0.5076;AMR_AF=0.6931;AN=5008;CIEND=-150,150;CIPOS=-150,150;CS=DEL_union;EAS_AF=0.9038;END=192885405;EUR_AF=0.6789;MC=BI_GS_CNV_3_192875322_192885392,UW_VH_2173,UW_VH_5913,UW_VH_13886,UW_VH_18813,UW_VH_11681,UW_VH_17262,YL_CN_MSL_746,SI_BD_3867,UW_VH_11187,UW_VH_11816,UW_VH_7429,UW_VH_11716;NS=2504;SAS_AF=0.7372;SVTYPE=DEL\tGT\t1|0\n3\t194398762\tUW_VH_25088\tC\t<CN0>\t100\tPASS\tAC=3360;AF=0.670927;AFR_AF=0.4576;AMR_AF=0.647;AN=5008;CIEND=0,470;CIPOS=-376,0;CS=DEL_union;EAS_AF=0.877;END=194400296;EUR_AF=0.7048;MC=YL_CN_GIH_622,YL_CN_JPT_907,YL_CN_TSI_775,UW_VH_15441,SI_BD_3877,UW_VH_16802,YL_CN_BEB_686,YL_CN_GWD_1166,YL_CN_STU_829,YL_CN_PJL_858,YL_CN_CEU_1010,YL_CN_KHV_863,UW_VH_2782,UW_VH_18993,UW_VH_19972,YL_CN_LWK_814,UW_VH_18380,YL_CN_ITU_826,YL_CN_YRI_1079,YL_CN_PEL_749,EM_DL_DEL10746451,YL_CN_ACB_942;NS=2504;SAS_AF=0.729;SVTYPE=DEL\tGT\t0|1\n3\t195417835\tDUP_gs_CNV_3_195417835_195445776\tG\t<CN2>,<CN3>,<CN4>,<CN5>\t.\tPASS\tAC=1906,1286,56,19;AF=0.380591,0.256789,0.0111821,0.00379393;AFR_AF=0.4682,0.115,0.0129,0.003;AMR_AF=0.3833,0.2839,0.013,0.0101;AN=5008;CS=DUP_gs;EAS_AF=0.3502,0.4246,0.0188,0.004;END=195445776;EUR_AF=0.3241,0.2674,0.007,0.001;NS=2504;SAS_AF=0.3497,0.2454,0.0041,0.0031;SITEPOST=0.9954;SVTYPE=CNV\tGT\t1|1\n3\t195452012\tDUP_gs_CNV_3_195452012_195457240\tT\t<CN2>,<CN3>,<CN4>\t.\tPASS\tAC=2618,32,6;AF=0.522764,0.00638978,0.00119808;AFR_AF=0.4894,0.0159,0.003;AMR_AF=0.5447,0.0014,0.0014;AN=5008;CS=DUP_gs;EAS_AF=0.6687,0.0069,0;END=195457240;EUR_AF=0.4443,0.002,0;NS=2504;SAS_AF=0.4826,0.001,0.001;SITEPOST=0.9955;SVTYPE=CNV\tGT\t1|1\n3\t195457317\tUW_VH_6811\tC\t<CN0>\t100\tPASS\tAC=625;AF=0.1248;AFR_AF=0.0265;AMR_AF=0.0951;AN=5008;CIEND=0,350;CIPOS=-381,0;CS=DEL_union;EAS_AF=0.3095;END=195471062;EUR_AF=0.0656;MC=YL_CN_JPT_922;NS=2504;SAS_AF=0.1493;SVTYPE=DEL\tGT\t0|1\n3\t195505831\tSI_BD_3904\tG\t<CN0>\t100\tPASS\tAC=2874;AF=0.573882;AFR_AF=0.5378;AMR_AF=0.5029;AN=5008;CIEND=-50,50;CIPOS=-50,50;CS=DEL_union;EAS_AF=0.7361;END=195507123;EUR_AF=0.5944;NS=2504;SAS_AF=0.4847;SVTYPE=DEL\tGT\t1|0\n3\t195569206\tBI_GS_DEL1_B3_P0690_30\tT\t<CN0>\t100\tPASS\tAC=2223;AF=0.44389;AFR_AF=0.2837;AMR_AF=0.5086;AN=5008;CIEND=-1,1;CIPOS=-1,1;CS=DEL_union;EAS_AF=0.7728;END=195569923;EUR_AF=0.2753;MC=UW_VH_1735,SI_BD_3912;NS=2504;SAS_AF=0.4489;SVTYPE=DEL\tGT\t0|1\n3\t195680898\tDUP_gs_CNV_3_195680898_195693668\tC\t<CN0>,<CN2>\t.\tPASS\tAC=49,241;AF=0.00978435,0.048123;AFR_AF=0.0023,0.1437;AMR_AF=0.0259,0.0245;AN=5008;CS=DUP_gs;EAS_AF=0.0119,0.004;END=195693668;EUR_AF=0.005,0.0179;NS=2504;SAS_AF=0.0112,0.0123;SITEPOST=0.99535;SVTYPE=CNV\tGT\t1|0\n3\t195773919\tBI_GS_DEL1_B1_P0690_450\tG\t<CN0>\t100\tPASS\tAC=1021;AF=0.203874;AFR_AF=0.0393;AMR_AF=0.2176;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.619;END=195774981;EUR_AF=0.0457;MC=SI_BD_3920,UW_VH_23249,EM_DL_DEL10747714,UW_VH_6453,UW_VH_13701,UW_VH_19149,UW_VH_11376,UW_VH_54;NS=2504;SAS_AF=0.1513;SVTYPE=DEL\tGT\t1|0\n3\t196055919\tSI_BD_3925\tA\t<CN0>\t100\tPASS\tAC=2159;AF=0.43111;AFR_AF=0.1967;AMR_AF=0.4597;AN=5008;CIEND=-130,270;CIPOS=-270,161;CS=DEL_union;EAS_AF=0.7897;END=196056883;EUR_AF=0.3757;MC=BI_GS_DEL1_B1_P0691_38,EM_DL_DEL10747824;NS=2504;SAS_AF=0.4151;SVTYPE=DEL\tGT\t0|1\n4\t401039\tDEL_pindel_10693\tTAAGAATAAGGCGGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCATCTCTACTAAAAATACAAAAAATTAGCCGGGCGTGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGACGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCCGGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA\tT\t.\tPASS\tAC=1560;AF=0.311502;AFR_AF=0.4153;AMR_AF=0.2478;AN=5008;CS=DEL_pindel;EAS_AF=0.245;END=401369;EUR_AF=0.2873;MEINFO=AluYb3a1,1,281,+;NS=2504;SAS_AF=0.3098;SITEPOST=0.9926;SVTYPE=DEL_ALU\tGT\t1|0\n4\t6651592\tBI_GS_DEL1_B5_P0700_714\tG\t<CN0>\t100\tPASS\tAC=2171;AF=0.433506;AFR_AF=0.0877;AMR_AF=0.5836;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.5417;END=6652912;EUR_AF=0.6173;MC=YL_CN_CLM_749,YL_CN_MXL_744,YL_CN_TSI_821,YL_CN_GIH_656,YL_CN_STU_873,YL_CN_CHB_912,EM_DL_DEL10753565,YL_CN_GBR_845,YL_CN_KHV_920,YL_CN_CHS_898,YL_CN_CDX_771,YL_CN_BEB_726,YL_CN_JPT_964,UW_VH_346;NS=2504;SAS_AF=0.4939;SVTYPE=DEL\tGT\t0|1\n4\t6897351\tEM_DL_DEL68726\tC\t<CN0>\t100\tPASS\tAC=2487;AF=0.496605;AFR_AF=0.5885;AMR_AF=0.5245;AN=5008;CIEND=-150,150;CIPOS=-150,150;CS=DEL_union;EAS_AF=0.37;END=6900401;EUR_AF=0.4831;MC=YL_CN_GIH_659,UW_VH_347,SI_BD_4043,UW_VH_12565,BI_GS_DEL1_B2_P0700_799;NS=2504;SAS_AF=0.4969;SVTYPE=DEL\tGT\t1|0\n4\t7569173\tALU_umary_ALU_3077\tT\t<INS:ME:ALU>\t.\t.\tAC=295;AF=0.0589058;AFR_AF=0.1452;AMR_AF=0.0418;AN=5008;CS=ALU_umary;EAS_AF=0.0069;EUR_AF=0.0318;MEINFO=AluYc1,3,281,-;NS=2504;SAS_AF=0.0358;SITEPOST=1;SVLEN=278;SVTYPE=ALU;TSD=CTGGTCAGGTGTTTTTT\tGT\t1|0\n4\t7635491\tBI_GS_DEL1_B5_P0701_650\tT\t<CN0>\t100\tPASS\tAC=2200;AF=0.439297;AFR_AF=0.1354;AMR_AF=0.4524;AN=5008;CIEND=0,1;CIPOS=0,1;CS=DEL_union;EAS_AF=0.745;END=7635854;EUR_AF=0.4294;MC=UW_VH_24981,DEL_pindel_10930;NS=2504;SAS_AF=0.5358;SVTYPE=DEL\tGT\t0|1\n4\t7750915\tALU_umary_ALU_3078\tA\t<INS:ME:ALU>\t.\t.\tAC=3;AF=0.00059904;AFR_AF=0.0008;AMR_AF=0;AN=5008;CS=ALU_umary;EAS_AF=0;EUR_AF=0.001;MEINFO=AluUndef,1,206,-;NS=2504;SAS_AF=0.001;SITEPOST=1;SVLEN=205;SVTYPE=ALU;TSD=null\tGT\t0|1\n4\t9157568\tYL_CN_PEL_803\tT\t<CN0>\t100\tPASS\tAC=4492;AF=0.896965;AFR_AF=0.9599;AMR_AF=0.8602;AN=5008;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0.8621;END=9214307;EUR_AF=0.9235;MC=SI_BD_4069,BI_GS_DEL1_B1_P0703_87,BI_GS_DEL1_B1_P0703_86;NS=2504;SAS_AF=0.8466;SVTYPE=DEL\tGT\t1|1\n4\t9186956\tBI_GS_CNV_4_9186956_9206735\tA\t<CN0>\t100\tPASS\tAC=4525;AF=0.903554;AFR_AF=0.9599;AMR_AF=0.8602;AN=5008;CIEND=0,500;CIPOS=-500,0;CS=DEL_union;EAS_AF=0.8948;END=9206735;EUR_AF=0.9235;NS=2504;SAS_AF=0.8466;SVTYPE=DEL\tGT\t1|1\n4\t9457406\tDUP_gs_CNV_4_9457406_9481022\tA\t<CN0>,<CN2>\t.\tPASS\tAC=2872,34;AF=0.573482,0.00678914;AFR_AF=0.3699,0.0242;AMR_AF=0.7075,0;AN=5008;CS=DUP_gs;EAS_AF=0.5635,0.001;END=9481022;EUR_AF=0.7555,0.001;MC=YL_CN_ASW_928;NS=2504;SAS_AF=0.5767,0;SITEPOST=1;SVTYPE=CNV\tGT\t0|1\n4\t9573062\tDEL_pindel_11006\tGAAGACACTATTTGAAAAGGATACTTTTGCACACATGTTTACAGCAGCAAACTTCACAGTTGCAAAACTATAGAACCAGCCCATATGCCCATCAATCAATTAGTGGATA\tG\t.\tPASS\tAC=3307;AF=0.660343;AFR_AF=0.6301;AMR_AF=0.7118;AN=5008;CS=DEL_pindel;EAS_AF=0.5615;END=9573170;EUR_AF=0.839;NS=2504;SAS_AF=0.5828;SITEPOST=0.9947;SVTYPE=DEL\tGT\t1|1\n4\t9576978\tBI_GS_DEL1_B1_P0703_208\tT\t<CN0>\t100\tPASS\tAC=2100;AF=0.419329;AFR_AF=0.0915;AMR_AF=0.5086;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.4444;END=9577452;EUR_AF=0.6938;NS=2504;SAS_AF=0.4908;SVTYPE=DEL\tGT\t0|1\n4\t9603244\tSVA_umary_SVA_205\tC\t<INS:ME:SVA>\t.\t.\tAC=1685;AF=0.336462;AFR_AF=0.2837;AMR_AF=0.3213;AN=5008;CS=SVA_umary;EAS_AF=0.3284;EUR_AF=0.4702;MEINFO=SVA,1274,1542,-;NS=2504;SAS_AF=0.2894;SITEPOST=1;SVLEN=268;SVTYPE=SVA;TSD=AAGTTC\tGT\t1|1\n4\t9704849\tSVA_umary_SVA_206\tA\t<INS:ME:SVA>\t.\t.\tAC=1555;AF=0.310503;AFR_AF=0.1241;AMR_AF=0.3718;AN=5008;CS=SVA_umary;EAS_AF=0.3194;EUR_AF=0.494;MEINFO=SVA,150,1603,+;NS=2504;SAS_AF=0.3211;SITEPOST=1;SVLEN=1453;SVTYPE=SVA;TSD=AAGAAAATCACCATAAATCAGA\tGT\t0|1\n4\t10211223\tSI_BD_4077\tT\t<CN0>\t100\tPASS\tAC=3093;AF=0.617612;AFR_AF=0.5643;AMR_AF=0.6311;AN=5008;CIEND=-50,324;CIPOS=-324,57;CS=DEL_union;EAS_AF=0.5556;END=10234580;EUR_AF=0.6561;MC=UW_VH_5584,UW_VH_4758,UW_VH_1976,UW_VH_11138,UW_VH_5213,UW_VH_12331,UW_VH_11745,YL_CN_MXL_757,UW_VH_21179,UW_VH_24950,UW_VH_2551,UW_VH_19890,EM_DL_DEL68929,UW_VH_11377,UW_VH_16406,BI_GS_CNV_4_10211082_10229383,UW_VH_4553,UW_VH_18839,UW_VH_17745;NS=2504;SAS_AF=0.7045;SVTYPE=DEL\tGT\t0|1\n4\t12239264\tALU_umary_ALU_3090\tA\t<INS:ME:ALU>\t.\t.\tAC=1280;AF=0.255591;AFR_AF=0.2133;AMR_AF=0.2853;AN=5008;CS=ALU_umary;EAS_AF=0.2192;EUR_AF=0.3082;MEINFO=AluUndef,181,281,-;NS=2504;SAS_AF=0.2751;SITEPOST=1;SVLEN=100;SVTYPE=ALU;TSD=null\tGT\t0|1\n4\t16426943\tDEL_pindel_11135\tCATATATATATGTGTATATATATATATATATATATATATATATATATATATATATAT\tC\t.\tPASS\tAC=1838;AF=0.367013;AFR_AF=0.553;AMR_AF=0.2824;AN=5008;CS=DEL_pindel;EAS_AF=0.2401;END=16426999;EUR_AF=0.3698;NS=2504;SAS_AF=0.3037;SITEPOST=0.9898;SVTYPE=DEL\tGT\t0|1\n4\t16917031\tCINV_delly_INV00075585\tG\t<INV>\t.\tPASS\tAC=52;AF=0.0103834;AFR_AF=0.0015;AMR_AF=0.0173;AN=5008;CIEND=-114,114;CIPOS=-114,114;CS=CINV_delly;EAS_AF=0.001;END=16917489;EUR_AF=0.0179;IMPRECISE;NS=2504;SAS_AF=0.0194;SVTYPE=INV\tGT\t1|0\n4\t17202756\tDEL_pindel_11150\tTTATCCTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCCCGCTGTTTTAGCCCAGGCCGGATTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCCTCCCAGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTGTTAGCCAAGATGGTCTCGATCTCCTGACCTTGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCAGCC\tT\t.\tPASS\tAC=4439;AF=0.886382;AFR_AF=0.829;AMR_AF=0.915;AN=5008;CS=DEL_pindel;EAS_AF=0.8869;END=17203066;EUR_AF=0.9095;MEINFO=AluYb,1,281,-;NS=2504;SAS_AF=0.9192;SITEPOST=0.9979;SVTYPE=DEL_ALU\tGT\t1|1\n4\t19643112\tDEL_pindel_11205\tTAACAGATGTCCAAGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCAGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA\tT\t.\tPASS\tAC=1280;AF=0.255591;AFR_AF=0.2632;AMR_AF=0.2536;AN=5008;CS=DEL_pindel;EAS_AF=0.2073;END=19643453;EUR_AF=0.2942;MEINFO=AluYa5,1,281,+;NS=2504;SAS_AF=0.2566;SITEPOST=0.99915;SVTYPE=DEL_ALU\tGT\t1|0\n4\t22432891\tDEL_pindel_11260\tAAAAGCCTTGTACTAATTCTTATATATATATTATATATAACAATATTGTACAAGGGTACAAT\tA\t.\tPASS\tAC=2725;AF=0.544129;AFR_AF=0.3926;AMR_AF=0.611;AN=5008;CS=DEL_pindel;EAS_AF=0.5893;END=22432952;EUR_AF=0.664;NS=2504;SAS_AF=0.5317;SITEPOST=0.9893;SVTYPE=DEL\tGT\t1|0\n4\t23721664\tDEL_pindel_11282\tTAGAAAAATACAGATTCCAGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCATGAGGTCAAGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGCGGTGGCGGACGCCTGTAGTCCCAGCTACTCCGGAGGCTGAGGCAGGAGAATGGCGTGAACCCAGGAAGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCCGGCCCGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAA\tT\t.\tPASS\tAC=1615;AF=0.322484;AFR_AF=0.2466;AMR_AF=0.4179;AN=5008;CS=DEL_pindel;EAS_AF=0.2649;END=23721985;EUR_AF=0.4364;MEINFO=AluYb6_2,1,281,+;NS=2504;SAS_AF=0.2996;SITEPOST=0.9992;SVTYPE=DEL_ALU\tGT\t1|0\n4\t26438630\tALU_umary_ALU_3159\tT\t<INS:ME:ALU>\t.\t.\tAC=1791;AF=0.357628;AFR_AF=0.1997;AMR_AF=0.464;AN=5008;CS=ALU_umary;EAS_AF=0.3849;EUR_AF=0.4185;MEINFO=AluYa5,1,281,-;NS=2504;SAS_AF=0.4049;SITEPOST=1;SVLEN=280;SVTYPE=ALU;TSD=TGCTAACATTCTT\tGT\t1|1\n4\t28320770\tALU_umary_ALU_3168\tA\t<INS:ME:ALU>\t.\t.\tAC=892;AF=0.178115;AFR_AF=0.0303;AMR_AF=0.196;AN=5008;CS=ALU_umary;EAS_AF=0.2956;EUR_AF=0.1769;MEINFO=AluYa4_5,1,281,+;NS=2504;SAS_AF=0.2454;SITEPOST=1;SVLEN=280;SVTYPE=ALU;TSD=AACAAAAAAAAGTAGACAA\tGT\t1|0\n4\t28421593\tBI_GS_DEL1_B4_P0722_85\tT\t<CN0>\t100\tPASS\tAC=2554;AF=0.509984;AFR_AF=0.3775;AMR_AF=0.6758;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.501;END=28421942;EUR_AF=0.502;MC=UW_VH_354;NS=2504;SAS_AF=0.589;SVTYPE=DEL\tGT\t1|0\n4\t29661109\tDEL_pindel_11420\tAAGGGCCCTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCCGGACTGTGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGAATGGTCTCGATCTCCTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC\tA\t.\tPASS\tAC=3751;AF=0.749002;AFR_AF=0.7814;AMR_AF=0.7277;AN=5008;CS=DEL_pindel;EAS_AF=0.8284;END=29661437;EUR_AF=0.6829;MEINFO=AluYb5,1,281,-;NS=2504;SAS_AF=0.7065;SITEPOST=0.9661;SVTYPE=DEL_ALU\tGT\t1|1\n4\t29907839\tALU_umary_ALU_3178\tT\t<INS:ME:ALU>\t.\t.\tAC=1332;AF=0.265974;AFR_AF=0.3646;AMR_AF=0.1513;AN=5008;CS=ALU_umary;EAS_AF=0.2956;EUR_AF=0.2356;MEINFO=AluUndef,4,270,-;NS=2504;SAS_AF=0.2147;SITEPOST=1;SVLEN=266;SVTYPE=ALU;TSD=GACATGTAATATTTTT\tGT\t1|1\n4\t35240260\tBI_GS_DEL1_B1_P0729_177\tA\t<CN0>\t100\tPASS\tAC=640;AF=0.127796;AFR_AF=0.1165;AMR_AF=0.1671;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.0308;END=35244433;EUR_AF=0.1909;MC=EM_DL_DEL69622,UW_VH_1413,YL_CN_LWK_918,SI_BD_4239,YL_CN_GBR_880;NS=2504;SAS_AF=0.1503;SVTYPE=DEL\tGT\t1|0\n4\t36469904\tDEL_pindel_11545\tTAGAAAATATAACGGGTAGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCGTGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAGAAAAAAAAAAAA\tT\t.\tPASS\tAC=2781;AF=0.555312;AFR_AF=0.6354;AMR_AF=0.5043;AN=5008;CS=DEL_pindel;EAS_AF=0.5506;END=36470237;EUR_AF=0.5557;MEINFO=AluYa4_5,1,281,+;NS=2504;SAS_AF=0.4877;SITEPOST=0.988;SVTYPE=DEL_ALU\tGT\t1|1\n4\t36652565\tDEL_pindel_11551\tTAATATCTCCTCATTTGTTTATTTATTCAATAGTATTTATTTGGAACATAGTAGCTGCCAGGCACTCTGCTAGCAAGTGAAATGCAATGGTTAACAACATATGTAGTTTCCC\tT\t.\tPASS\tAC=810;AF=0.161741;AFR_AF=0.1392;AMR_AF=0.1787;AN=5008;CS=DEL_pindel;EAS_AF=0.244;END=36652676;EUR_AF=0.1879;NS=2504;SAS_AF=0.0685;SITEPOST=1;SVTYPE=DEL\tGT\t1|0\n4\t36780614\tDEL_pindel_11553\tATCTTTTGTTCTTCTTCTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGCGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGCGTAGCTGGGACTACAGACGCCCGCCACCACGCCCGGCTAATTTTTTTGTGTTTTTTTAGTAGAGACGGGGTTTCACTGTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC\tA\t.\tPASS\tAC=235;AF=0.0469249;AFR_AF=0.0242;AMR_AF=0.0692;AN=5008;CS=DEL_pindel;EAS_AF=0.002;END=36780937;EUR_AF=0.1113;MEINFO=AluYf1,1,281,-;NS=2504;SAS_AF=0.0419;SITEPOST=0.9994;SVTYPE=DEL_ALU\tGT\t1|0\n4\t37483080\tDEL_pindel_11569\tTGTCTCCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAAGTCCAAGATCAAG\tT\t.\tPASS\tAC=745;AF=0.148762;AFR_AF=0.0401;AMR_AF=0.1888;AN=5008;CS=DEL_pindel;EAS_AF=0.0427;END=37483138;EUR_AF=0.2664;NS=2504;SAS_AF=0.2556;SITEPOST=0.9998;SVTYPE=DEL\tGT\t0|1\n4\t38264296\tBI_GS_DEL1_B1_P0732_305\tT\t<CN0>\t100\tPASS\tAC=678;AF=0.135383;AFR_AF=0.1914;AMR_AF=0.1268;AN=5008;CIEND=-9,10;CIPOS=-9,10;CS=DEL_union;EAS_AF=0.0149;END=38265498;EUR_AF=0.1421;MC=UW_VH_13,EM_DL_DEL10767932,UW_VH_3139;NS=2504;SAS_AF=0.183;SVTYPE=DEL\tGT\t1|1\n4\t39031076\tDEL_pindel_11600\tTAAGAACTAATTTTTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTGGTAGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCGCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAA\tT\t.\tPASS\tAC=3262;AF=0.651358;AFR_AF=0.7231;AMR_AF=0.6484;AN=5008;CS=DEL_pindel;EAS_AF=0.6399;END=39031358;EUR_AF=0.5805;MEINFO=AluYc1,38,281,+;NS=2504;SAS_AF=0.6411;SITEPOST=0.9627;SVTYPE=DEL_ALU\tGT\t1|0\n4\t40024928\tUW_VH_359\tT\t<CN0>\t100\tPASS\tAC=2411;AF=0.48143;AFR_AF=0.3389;AMR_AF=0.5778;AN=5008;CIEND=0,582;CIPOS=-608,0;CS=DEL_union;EAS_AF=0.3879;END=40026278;EUR_AF=0.6143;MC=YL_CN_JPT_1026,YL_CN_PUR_1121,YL_CN_PEL_835,YL_CN_CDX_817,YL_CN_IBS_823,YL_CN_TSI_860,BI_GS_DEL1_B5_P0734_14,YL_CN_KHV_969,YL_CN_MXL_785,SI_BD_4266,EM_DL_DEL10768552,YL_CN_CHB_958,YL_CN_FIN_894,YL_CN_ITU_912,YL_CN_GIH_698,YL_CN_CHS_954,YL_CN_MSL_850;NS=2504;SAS_AF=0.5654;SVTYPE=DEL\tGT\t0|1\n4\t40235048\tINV_delly_INV00076146\tG\t<INV>\t.\tPASS\tAC=853;AF=0.170327;AFR_AF=0.2874;AMR_AF=0.098;AN=5008;CIEND=-114,114;CIPOS=-114,114;CS=INV_delly;EAS_AF=0.0317;END=40237039;EUR_AF=0.1491;IMPRECISE;NS=2504;SAS_AF=0.228;SITEPOST=1;SVTYPE=INV\tGT\t1|0\n4\t41068089\tDEL_pindel_11650\tTTAAAAGCTTGAAATGAGGAAATTTTTTTTTCTGTATTGGAGAGGTTAGATGTCATGTTGATTGGAAAAAAAAAAAAACTTTTCAGTGACATATAACATATAGAAAATGCACACACG\tT\t.\tPASS\tAC=503;AF=0.100439;AFR_AF=0.0991;AMR_AF=0.098;AN=5008;CS=DEL_pindel;EAS_AF=0.0794;END=41068205;EUR_AF=0.1441;NS=2504;SAS_AF=0.0808;SITEPOST=0.9996;SVTYPE=DEL\tGT\t1|0\n4\t42762647\tBI_GS_DEL1_B1_P0736_682\tT\t<CN0>\t100\tPASS\tAC=1625;AF=0.324481;AFR_AF=0.68;AMR_AF=0.1902;AN=5008;CIEND=-4,4;CIPOS=-4,4;CS=DEL_union;EAS_AF=0.1855;END=42769523;EUR_AF=0.2038;MC=UW_VH_2203,EM_DL_DEL69786,YL_CN_JPT_1028;NS=2504;SAS_AF=0.2065;SVTYPE=DEL\tGT\t0|1\n4\t43399986\tALU_umary_ALU_3259\tA\t<INS:ME:ALU>\t.\t.\tAC=1639;AF=0.327276;AFR_AF=0.0953;AMR_AF=0.4496;AN=5008;CS=ALU_umary;EAS_AF=0.1617;EUR_AF=0.6143;MEINFO=AluYb9,1,280,+;NS=2504;SAS_AF=0.4294;SITEPOST=1;SVLEN=279;SVTYPE=ALU;TSD=GAAATTTAAGCTA\tGT\t0|1\n4\t43751813\tBI_GS_DEL1_B4_P0737_159\tC\t<CN0>\t100\tPASS\tAC=2412;AF=0.481629;AFR_AF=0.1899;AMR_AF=0.4914;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.6389;END=43752122;EUR_AF=0.6133;NS=2504;SAS_AF=0.5716;SVTYPE=DEL\tGT\t0|1\n4\t43931499\tBI_GS_DEL1_B2_P0737_584\tA\t<CN0>\t100\tPASS\tAC=4775;AF=0.953474;AFR_AF=0.8396;AMR_AF=0.9841;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.997;END=43931838;EUR_AF=0.996;MC=DEL_pindel_11726;NS=2504;SAS_AF=0.9969;SVTYPE=DEL\tGT\t1|1\n4\t44507275\tDEL_pindel_11743\tATCTTTTTTTTTTTTTTTTTTTTAAATTTAAAACTTTTTTTTTTTTTTTTTATTATACTCTAAGTTTTAGGGTACATGTGCACATTGTGCAGGTTAGTTACATATGTATACATGTGCCATGCTGGTGCGCTGCACCCACTAATGTGTCATCTAGCATTAGGTATATCTCCCAATGCTATCCCTCCCCCCTCCCCCGACCCCACCACAGTCCCCAGAGTGTGATATTCCCCTTCCTGTGTCCATGTGATCTCATTGTTCAATTCCCACCTATGAGTGAGAATATGCGGTGTTTGGTTTTTTGTTCTTGCGATAGTTTACTGAGAATGATGGTTTCCAATTTCATCCATGTCCCTACAAAGGATATGAACTCATCATTTTTTATGGCTGCATAGTATTCCATGGTGTATATGTGCCACATTTTCTTAATCCAGTCTATCATTGTTGGACATTTGGGT\tA\t.\tPASS\tAC=4786;AF=0.955671;AFR_AF=0.8563;AMR_AF=0.9813;AN=5008;CS=DEL_pindel;EAS_AF=0.994;END=44507729;EUR_AF=0.994;MEINFO=LINE1,5619,6019,-;NS=2504;SAS_AF=0.9928;SITEPOST=1;SVTYPE=DEL_LINE1\tGT\t1|1\n4\t44509377\tDEL_pindel_11744\tTAGAAAAAACATCAATATGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGACGGGCGGATCACGAGGTCAGGAGATGGAGACCATCCTGGCTAACACGGTGAAACCCCGTCTCTACTAAAAATACAAAAATTAGCCGGGCATGGTGGCGCGCGCCTGTAGTCCCAGCTACACGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGTCGAGATCGCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAAACTCCGTCTCAAAAAAAAAAAAAAAAAAAAA\tT\t.\tPASS\tAC=4166;AF=0.831869;AFR_AF=0.7315;AMR_AF=0.879;AN=5008;CS=DEL_pindel;EAS_AF=0.8125;END=44509695;EUR_AF=0.9185;MEINFO=AluYg6,1,281,+;NS=2504;SAS_AF=0.865;SITEPOST=0.9999;SVTYPE=DEL_ALU\tGT\t1|1\n4\t44971996\tDEL_pindel_11760\tTTTATTTATTATATTTATATATATTTATATATATAATATATTAATATATTTATTATTATTATTATTTATTTTTATATTTATATATTTATATTTATATTTATATTTATATTTATATATATTTATATATTATTAATATATTTATTATTATTATTATTATTATTTATTATTTATTA\tT\t.\tPASS\tAC=1930;AF=0.385383;AFR_AF=0.1664;AMR_AF=0.4769;AN=5008;CS=DEL_pindel;EAS_AF=0.3968;END=44972168;EUR_AF=0.506;NS=2504;SAS_AF=0.4806;SITEPOST=0.9996;SVTYPE=DEL\tGT\t1|0\n4\t46202797\tUW_VH_362\tC\t<CN0>\t100\tPASS\tAC=2507;AF=0.500599;AFR_AF=0.2209;AMR_AF=0.487;AN=5008;CIEND=0,545;CIPOS=-481,0;CS=DEL_union;EAS_AF=0.5139;END=46205026;EUR_AF=0.5805;MC=EM_DL_DEL69846,YL_CN_GWD_1290,BI_GS_DEL1_B1_P0740_143;NS=2504;SAS_AF=0.7924;SVTYPE=DEL\tGT\t1|1\n4\t54415654\tALU_umary_ALU_3287\tG\t<INS:ME:ALU>\t.\t.\tAC=834;AF=0.166534;AFR_AF=0.1346;AMR_AF=0.2147;AN=5008;CS=ALU_umary;EAS_AF=0.1062;EUR_AF=0.2505;MEINFO=AluUndef,1,281,+;NS=2504;SAS_AF=0.1513;SITEPOST=1;SVLEN=280;SVTYPE=ALU;TSD=AAGAGATGTGG\tGT\t0|1\n4\t55482419\tDEL_pindel_11842\tTAAGAAAGCTTATTTACCGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACAAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAACTACAAAAAATAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCTAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAA\tT\t.\tPASS\tAC=1842;AF=0.367812;AFR_AF=0.4342;AMR_AF=0.4251;AN=5008;CS=DEL_pindel;EAS_AF=0.2976;END=55482740;EUR_AF=0.3688;MEINFO=AluYa8,1,281,+;NS=2504;SAS_AF=0.3088;SITEPOST=0.9997;SVTYPE=DEL_ALU\tGT\t1|1\n4\t55808674\tDEL_pindel_11850\tAAAAACAAAACAGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAC\tA\t.\tPASS\tAC=2354;AF=0.470048;AFR_AF=0.5946;AMR_AF=0.5951;AN=5008;CS=DEL_pindel;EAS_AF=0.3403;END=55808918;EUR_AF=0.4751;MEINFO=AluY,68,281,+;NS=2504;SAS_AF=0.3415;SITEPOST=0.9983;SVTYPE=DEL_ALU\tGT\t1|1\n4\t55998554\tDEL_pindel_11855\tTGAGGTTTAGAAAGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCCGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC\tT\t.\tPASS\tAC=878;AF=0.175319;AFR_AF=0.1097;AMR_AF=0.1628;AN=5008;CS=DEL_pindel;EAS_AF=0.1627;END=55998888;EUR_AF=0.2346;MEINFO=AluYb6_2,1,281,-;NS=2504;SAS_AF=0.2249;SITEPOST=0.9993;SVTYPE=DEL_ALU\tGT\t0|1\n4\t57501858\tDEL_pindel_11881\tGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCCGGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAA\tG\t.\tPASS\tAC=2135;AF=0.426318;AFR_AF=0.5794;AMR_AF=0.3458;AN=5008;CS=DEL_pindel;EAS_AF=0.4812;END=57501984;EUR_AF=0.2913;NS=2504;SAS_AF=0.3589;SITEPOST=0.9777;SVTYPE=DEL\tGT\t1|0\n4\t58087336\tDEL_pindel_11888\tTAGTAAATGTTCTTTTTTTTTTTTTTTTTTTTTTTTTTATTATACTCTAAGTTTTAGGGTACATGTGCACATTGTGCAGGTTAGTTACATATGTATACATGTGCCATGCTGGTGCGCTGCACCCACTAATGTGTCATCTAGCATTAGGTATATCTCCCAATGCTATCCCTCCCCCCTCCCCCGACCCCACCTCAGTCCCCAGAGTGTGATATTCCCCTTCCTGTGTCCATGTGATCTCATTGTTCAATTCCCACCTATGAGTGAGAATATGCGGTGTTTGGTTTTTTGTTCTTGCGATAGTTTACTGAGAATGATGGTTTCCAATTTCATCCATGTCCCTACAAAGGATATGAACTCATCATTTTTTATGGCTGCATAGTATTCCATGGTGTATATGTG\tT\t.\tPASS\tAC=3354;AF=0.669728;AFR_AF=0.702;AMR_AF=0.6988;AN=5008;CS=DEL_pindel;EAS_AF=0.6448;END=58087734;EUR_AF=0.6451;MEINFO=LINE1,5662,6019,-;NS=2504;SAS_AF=0.6564;SITEPOST=0.9906;SVTYPE=DEL_LINE1\tGT\t1|1\n4\t58148016\tDEL_pindel_11889\tTAAAAAATATTCAACCTTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGCGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCCGACCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA\tT\t.\tPASS\tAC=3258;AF=0.650559;AFR_AF=0.6838;AMR_AF=0.6225;AN=5008;CS=DEL_pindel;EAS_AF=0.6597;END=58148342;EUR_AF=0.5954;MEINFO=AluYb6_2,17,281,+;NS=2504;SAS_AF=0.6728;SITEPOST=0.9862;SVTYPE=DEL_ALU\tGT\t1|0\n4\t59348231\tDEL_pindel_11913\tAGACTGCTATTGAGAGGGCTTACAGGCAGGAATTGCACAGAAAAGCTGCCTT\tA\t.\tPASS\tAC=344;AF=0.0686901;AFR_AF=0.0053;AMR_AF=0.1009;AN=5008;CS=DEL_pindel;EAS_AF=0.0367;END=59348282;EUR_AF=0.1441;NS=2504;SAS_AF=0.0869;SITEPOST=0.9962;SVTYPE=DEL\tGT\t1|0\n4\t59985387\tDEL_pindel_11930\tTGTTCTTTTTCTCTGTGTAGGGAGGACAGCTCTCACATGAGGGTCTTCTGATCTACTTTCAGAGAAGGTAAAGATCAAAGCGTCTTTCTAGCACGCACTCTTTCTACG\tT\t.\tPASS\tAC=2453;AF=0.489816;AFR_AF=0.3132;AMR_AF=0.4798;AN=5008;CS=DEL_pindel;EAS_AF=0.5169;END=59985494;EUR_AF=0.5994;NS=2504;SAS_AF=0.5951;SITEPOST=0.9997;SVTYPE=DEL\tGT\t1|0\n4\t61330102\tBI_GS_DEL1_B5_P0755_327\tA\t<CN0>\t100\tPASS\tAC=2498;AF=0.498802;AFR_AF=0.2027;AMR_AF=0.6988;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.5665;END=61333188;EUR_AF=0.6918;MC=SI_BD_4393,YL_CN_GIH_720,UW_VH_369;NS=2504;SAS_AF=0.4888;SVTYPE=DEL\tGT\t0|1\n4\t61569228\tDEL_pindel_11957\tATACAGCACACATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTTTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC\tA\t.\tPASS\tAC=3438;AF=0.686502;AFR_AF=0.6581;AMR_AF=0.7075;AN=5008;CS=DEL_pindel;EAS_AF=0.7083;END=61569558;EUR_AF=0.6789;MEINFO=AluYa5,1,281,-;NS=2504;SAS_AF=0.6953;SITEPOST=0.9639;SVTYPE=DEL_ALU\tGT\t0|1\n4\t61939189\tBI_GS_DEL1_B2_P0755_558\tC\t<CN0>\t100\tPASS\tAC=1995;AF=0.398363;AFR_AF=0.18;AMR_AF=0.4597;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.2778;END=61942243;EUR_AF=0.6342;MC=YL_CN_MSL_871,YL_CN_YRI_1251,SI_BD_4397,EM_DL_DEL71395,YL_CN_CHS_982;NS=2504;SAS_AF=0.5317;SVTYPE=DEL\tGT\t1|0\n4\t63668999\tYL_CN_JPT_1054\tT\t<CN0>\t100\tPASS\tAC=1148;AF=0.229233;AFR_AF=0.0946;AMR_AF=0.1729;AN=5008;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0.3909;END=63676240;EUR_AF=0.2058;MC=UW_VH_13531,SI_BD_4409,BI_GS_DEL1_B5_P0757_690,UW_VH_371,EM_DL_DEL71426;NS=2504;SAS_AF=0.3088;SVTYPE=DEL\tGT\t1|0\n4\t63670474\tBI_GS_DEL1_B3_P0757_31\tC\t<CN0>\t100\tPASS\tAC=1135;AF=0.226637;AFR_AF=0.0885;AMR_AF=0.17;AN=5008;CIEND=-9,10;CIPOS=-9,10;CS=DEL_union;EAS_AF=0.3889;END=63671759;EUR_AF=0.2048;NS=2504;SAS_AF=0.3088;SVTYPE=DEL\tGT\t1|0\n4\t64563186\tALU_umary_ALU_3331\tG\t<INS:ME:ALU>\t.\t.\tAC=906;AF=0.180911;AFR_AF=0.0613;AMR_AF=0.2752;AN=5008;CS=ALU_umary;EAS_AF=0.2192;EUR_AF=0.3032;MEINFO=AluY,14,281,+;NS=2504;SAS_AF=0.1104;SITEPOST=1;SVLEN=267;SVTYPE=ALU;TSD=AAGAAAAAACTGTGTG\tGT\t1|1\n4\t65216746\tALU_umary_ALU_3340\tG\t<INS:ME:ALU>\t.\t.\tAC=2161;AF=0.43151;AFR_AF=0.3215;AMR_AF=0.4222;AN=5008;CS=ALU_umary;EAS_AF=0.4633;EUR_AF=0.5119;MEINFO=AluUndef,4,280,-;NS=2504;SAS_AF=0.4714;SITEPOST=1;SVLEN=276;SVTYPE=ALU;TSD=AAAAAGTG\tGT\t1|1\n4\t66641109\tDEL_pindel_12068\tTTAAAATAAACACCGCATATTCTCACTCATAGGTGGGAATTGAACAATGAGAACACTTGGACACAGGAAGGGGAATATCACACTCTGGGGACTGTGGTGGGGTCGGGGGAGGGGGGAGGGATAGCATTGGGAGATATACCTAATGCTAGATGACACGTTAGTGGGTGCAGTGCACCAGCATGGCACATGTATACATATGTAACCTGCACAATGTGCACATGTACCCTAAAACTTAGAGTATAAAAAAAAAAAAAAAAAAAAAAACGAAAAGTGATCCAAAAAAAAAATAAATAAAAAAAAAAATAAATAAAA\tT\t.\tPASS\tAC=3862;AF=0.771166;AFR_AF=0.6248;AMR_AF=0.8156;AN=5008;CS=DEL_pindel;EAS_AF=0.8482;END=66641420;EUR_AF=0.7992;MEINFO=LINE1,5958,5973,+;NS=2504;SAS_AF=0.8292;SITEPOST=0.9902;SVTYPE=DEL_LINE1\tGT\t1|0\n4\t67106616\tALU_umary_ALU_3354\tC\t<INS:ME:ALU>\t.\t.\tAC=2618;AF=0.522764;AFR_AF=0.3691;AMR_AF=0.5692;AN=5008;CS=ALU_umary;EAS_AF=0.5813;EUR_AF=0.5706;MEINFO=AluUndef,1,281,+;NS=2504;SAS_AF=0.5879;SITEPOST=1;SVLEN=280;SVTYPE=ALU;TSD=AGAAAGATTAAGATTTGC\tGT\t1|0\n4\t67754010\tALU_umary_ALU_3360\tT\t<INS:ME:ALU>\t.\t.\tAC=403;AF=0.0804712;AFR_AF=0.0575;AMR_AF=0.0476;AN=5008;CS=ALU_umary;EAS_AF=0.0575;EUR_AF=0.0805;MEINFO=AluUndef,104,281,-;NS=2504;SAS_AF=0.1585;SITEPOST=1;SVLEN=177;SVTYPE=ALU;TSD=AAATAGACTCTTT\tGT\t0|1\n4\t67963892\tALU_umary_ALU_3362\tT\t<INS:ME:ALU>\t.\t.\tAC=3018;AF=0.602636;AFR_AF=0.5492;AMR_AF=0.6153;AN=5008;CS=ALU_umary;EAS_AF=0.5714;EUR_AF=0.661;MEINFO=AluUndef,10,276,-;NS=2504;SAS_AF=0.638;SITEPOST=0.9971;SVLEN=266;SVTYPE=ALU;TSD=TCCTTACAACTTTT\tGT\t1|1\n4\t68873177\tDEL_pindel_12115\tACTAGAGTAGCCAAAACAATTTCGGTAGAGGAGAATAAAGTGGGATAAATCATTTTTACTAATGTTAAGG\tA\t.\tPASS\tAC=1997;AF=0.398762;AFR_AF=0.3623;AMR_AF=0.4222;AN=5008;CS=DEL_pindel;EAS_AF=0.4127;END=68873246;EUR_AF=0.3728;NS=2504;SAS_AF=0.4438;SITEPOST=0.90315;SVTYPE=DEL\tGT\t0|1\n4\t69959841\tDEL_pindel_12133\tTGGTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGCGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCATGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCTACCACGCCCGGCTAATTTTTTGTATTTTTTTTTTTTTTAGTAGAGACGGGGTTTCACCGTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC\tT\t.\tPASS\tAC=3181;AF=0.635184;AFR_AF=0.73;AMR_AF=0.634;AN=5008;CS=DEL_pindel;EAS_AF=0.6994;END=69960165;EUR_AF=0.506;MEINFO=AluYc1,1,281,-;NS=2504;SAS_AF=0.5746;SITEPOST=0.9993;SVTYPE=DEL_ALU\tGT\t0|1\n4\t71926412\tDEL_pindel_12172\tCTCTTTCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCGCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAGAATGCCG\tC\t.\tPASS\tAC=3208;AF=0.640575;AFR_AF=0.6286;AMR_AF=0.7104;AN=5008;CS=DEL_pindel;EAS_AF=0.6696;END=71926572;EUR_AF=0.6123;MEINFO=AluY,154,281,+;NS=2504;SAS_AF=0.6063;SITEPOST=0.99;SVTYPE=DEL_ALU\tGT\t0|1\n4\t72829626\tDEL_pindel_12179\tACTTATTTTTGTAATCTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGTCGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCCGCCTCAGCCTCCCGAGTAGCTGGGACCACAGGCGCCCGCCACCGCGCCCGGCTAACTTTTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCTGGC\tA\t.\tPASS\tAC=3173;AF=0.633586;AFR_AF=0.4349;AMR_AF=0.7075;AN=5008;CS=DEL_pindel;EAS_AF=0.7282;END=72829955;EUR_AF=0.6928;MEINFO=AluYb5,2,281,-;NS=2504;SAS_AF=0.6912;SITEPOST=0.9512;SVTYPE=DEL_ALU\tGT\t1|0\n4\t73418754\tDEL_pindel_12197\tGAATGAAGAAATGAAGAAATGCGTGAATGAATGAGAGCAGTTTGAGTCGGAAGGGGTATGTGAAATTAGCATGCATCTTCTTTTGGCTA\tG\t.\tPASS\tAC=2479;AF=0.495008;AFR_AF=0.5719;AMR_AF=0.621;AN=5008;CS=DEL_pindel;EAS_AF=0.3849;END=73418842;EUR_AF=0.5706;NS=2504;SAS_AF=0.3374;SITEPOST=0.9991;SVTYPE=DEL\tGT\t1|1\n4\t73831245\tBI_GS_DEL1_B2_P0767_592\tA\t<CN0>\t100\tPASS\tAC=2390;AF=0.477236;AFR_AF=0.5159;AMR_AF=0.4539;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.5159;END=73831819;EUR_AF=0.4911;MC=UW_VH_377,DEL_pindel_12211,SI_BD_4476;NS=2504;SAS_AF=0.3875;SVTYPE=DEL\tGT\t0|1\n4\t78199221\tDEL_pindel_12283\tGCCCTAAGTATATTACGTGTATGGCTTCCTCTTCCAGGTCACATTGCTAAAGA\tG\t.\tPASS\tAC=1317;AF=0.262979;AFR_AF=0.3714;AMR_AF=0.2507;AN=5008;CS=DEL_pindel;EAS_AF=0.2371;END=78199273;EUR_AF=0.2097;NS=2504;SAS_AF=0.2065;SITEPOST=1;SVTYPE=DEL\tGT\t1|0\n4\t78236274\tDEL_pindel_12284\tTAAGAAGTGTGTGTACGCATATTCTCACTCATAGGTGGGAATTGAACAATGAGATCACATGGACACAGGAAGGGGAATATCACACTCTGGGGACTGTGGTGGGGTCGGGGGTGGGGGGAGGGATGGCATTGGGAGATATACCTAATGCTGGATGACACGTTGGTGGGTGCAGCGCACCAGCATGGCACATGTATACATATGTAACTAACCTGCACAATGTGCACATGTACCCTAAAACTTAAAGTATAATAAAAAAAAAAAAAAAAA\tT\t.\tPASS\tAC=1319;AF=0.263379;AFR_AF=0.3714;AMR_AF=0.2522;AN=5008;CS=DEL_pindel;EAS_AF=0.2351;END=78236540;EUR_AF=0.2107;MEINFO=LINE1,2700,2725,+;NS=2504;SAS_AF=0.2086;SITEPOST=1;SVTYPE=DEL_LINE1\tGT\t1|0\n4\t79159515\tALU_umary_ALU_3428\tT\t<INS:ME:ALU>\t.\t.\tAC=2277;AF=0.454673;AFR_AF=0.1929;AMR_AF=0.513;AN=5008;CS=ALU_umary;EAS_AF=0.5347;EUR_AF=0.5179;MEINFO=AluYa5,1,269,+;NS=2504;SAS_AF=0.6196;SITEPOST=1;SVLEN=268;SVTYPE=ALU;TSD=TAAAAAAGCT\tGT\t1|0\n4\t80205728\tDEL_pindel_12322\tTAAAGAATGATTGAGGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAATACAAAAAAAATTAGCCGGGCGCGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCCCACCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAA\tT\t.\tPASS\tAC=2309;AF=0.461062;AFR_AF=0.6475;AMR_AF=0.4827;AN=5008;CS=DEL_pindel;EAS_AF=0.2252;END=80206056;EUR_AF=0.4503;MEINFO=AluYb6_2,1,281,+;NS=2504;SAS_AF=0.4479;SITEPOST=0.9977;SVTYPE=DEL_ALU\tGT\t0|1\n4\t80360637\tUW_VH_1739\tG\t<CN0>\t100\tPASS\tAC=1235;AF=0.246605;AFR_AF=0.0764;AMR_AF=0.1484;AN=5008;CIEND=0,466;CIPOS=-412,0;CS=DEL_union;EAS_AF=0.4067;END=80362723;EUR_AF=0.1431;MC=SI_BD_4510,YL_CN_PJL_1017,EM_DL_DEL71863,BI_GS_DEL1_B2_P0774_245;NS=2504;SAS_AF=0.4877;SVTYPE=DEL\tGT\t1|0\n4\t81302526\tDEL_pindel_12337\tACATATACATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGTCGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC\tA\t.\tPASS\tAC=3727;AF=0.744209;AFR_AF=0.6422;AMR_AF=0.7637;AN=5008;CS=DEL_pindel;EAS_AF=0.7827;END=81302865;EUR_AF=0.7744;MEINFO=AluYb6_2,1,281,-;NS=2504;SAS_AF=0.7975;SITEPOST=0.9555;SVTYPE=DEL_ALU\tGT\t0|1\n4\t81991515\tDEL_pindel_12347\tCAAGAAATAGCTTTACGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATTCTGGCTAACACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTGGTAGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCGCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAA\tC\t.\tPASS\tAC=3789;AF=0.756589;AFR_AF=0.7148;AMR_AF=0.7493;AN=5008;CS=DEL_pindel;EAS_AF=0.7609;END=81991836;EUR_AF=0.8002;MEINFO=AluYc1,1,281,+;NS=2504;SAS_AF=0.7689;SITEPOST=0.9633;SVTYPE=DEL_ALU\tGT\t1|1\n4\t82630148\tALU_umary_ALU_3449\tA\t<INS:ME:ALU>\t.\t.\tAC=1771;AF=0.353634;AFR_AF=0.4009;AMR_AF=0.3026;AN=5008;CS=ALU_umary;EAS_AF=0.2708;EUR_AF=0.4433;MEINFO=AluYa5,1,266,+;NS=2504;SAS_AF=0.319;SITEPOST=1;SVLEN=265;SVTYPE=ALU;TSD=AAAATATCAGACTTCA\tGT\t1|0\n4\t84221708\tDEL_pindel_12380\tTAAGAATTATTACACTTTGGGAGGACGAGGCGGGCAGATCACGAGGTCAGGAGATCGAGACCCATCCGGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAA\tT\t.\tPASS\tAC=2731;AF=0.545327;AFR_AF=0.3374;AMR_AF=0.5418;AN=5008;CS=DEL_pindel;EAS_AF=0.7113;END=84221993;EUR_AF=0.6093;MEINFO=AluY,35,281,+;NS=2504;SAS_AF=0.592;SITEPOST=0.9926;SVTYPE=DEL_ALU\tGT\t1|1\n4\t86470382\tALU_umary_ALU_3474\tA\t<INS:ME:ALU>\t.\t.\tAC=1845;AF=0.368411;AFR_AF=0.3245;AMR_AF=0.4121;AN=5008;CS=ALU_umary;EAS_AF=0.1657;EUR_AF=0.5586;MEINFO=AluYc1,2,281,+;NS=2504;SAS_AF=0.41;SITEPOST=1;SVLEN=279;SVTYPE=ALU;TSD=AAGAAATTGCCA\tGT\t1|1\n4\t86584502\tALU_umary_ALU_3475\tG\t<INS:ME:ALU>\t.\t.\tAC=1252;AF=0.25;AFR_AF=0.2693;AMR_AF=0.2522;AN=5008;CS=ALU_umary;EAS_AF=0.0704;EUR_AF=0.4056;MEINFO=AluUndef,2,281,+;NS=2504;SAS_AF=0.2474;SITEPOST=0.9997;SVLEN=279;SVTYPE=ALU;TSD=AAGAATGCTTGTG\tGT\t0|1\n4\t87066353\tDEL_pindel_12432\tCAAATTTCTATCTCTAGCCGGGCGTGGTGGCGCGCGCCTGTAGTCCCAGCTACACGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCGCGCCACTGCACTCCAGCCTGGGCTACAGAGCGAGACACCGTCTCAAAAAAAAAAAAAAAAAAAAA\tC\t.\tPASS\tAC=951;AF=0.189896;AFR_AF=0.3457;AMR_AF=0.196;AN=5008;CS=DEL_pindel;EAS_AF=0.1429;END=87066535;EUR_AF=0.1471;MEINFO=AluYg,134,281,+;NS=2504;SAS_AF=0.0675;SITEPOST=0.9998;SVTYPE=DEL_ALU\tGT\t1|0\n4\t88032137\tDEL_pindel_12457\tCTACTTAAACTTTATTTTTTTTTTTTTATTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGCGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCTACCACGCCCGGCTAATTTTTTGTATTTTTTTTTTTTTTTAGTAGAGACGGGGTTTCACCGTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCCT\tC\t.\tPASS\tAC=2081;AF=0.415535;AFR_AF=0.3828;AMR_AF=0.4885;AN=5008;CS=DEL_pindel;EAS_AF=0.4266;END=88032469;EUR_AF=0.4672;MEINFO=AluYc1,1,281,-;NS=2504;SAS_AF=0.3436;SITEPOST=0.9879;SVTYPE=DEL_ALU\tGT\t0|1\n4\t88775635\tDEL_pindel_12470\tTGATGCTGATCTATTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCCGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC\tT\t.\tPASS\tAC=978;AF=0.195288;AFR_AF=0.171;AMR_AF=0.2003;AN=5008;CS=DEL_pindel;EAS_AF=0.1071;END=88775952;EUR_AF=0.2584;MEINFO=AluYb6_2,1,281,-;NS=2504;SAS_AF=0.2505;SITEPOST=0.9998;SVTYPE=DEL_ALU\tGT\t1|0\n4\t89681460\tDEL_pindel_12482\tTAGAAATGCCAAGTGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCAGAGGCGGGCGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACGCGGTGAAACCCCGCCTCTACTAAAAATACAAAAAATTAGCCGGGCGTGGTGGCGGGCGCCTGTGGTCCCGGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGGTCGCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAA\tT\t.\tPASS\tAC=2097;AF=0.41873;AFR_AF=0.2943;AMR_AF=0.5317;AN=5008;CS=DEL_pindel;EAS_AF=0.377;END=89681782;EUR_AF=0.5915;MEINFO=AluYh7,1,281,+;NS=2504;SAS_AF=0.3722;SITEPOST=0.9978;SVTYPE=DEL_ALU\tGT\t1|1\n4\t91931556\tBI_GS_DEL1_B2_P0785_570\tG\t<CN0>\t100\tPASS\tAC=1284;AF=0.25639;AFR_AF=0.0537;AMR_AF=0.2205;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.3919;END=91935838;EUR_AF=0.3936;MC=EM_DL_DEL72105,YL_CN_YRI_1298,UW_VH_389;NS=2504;SAS_AF=0.2751;SVTYPE=DEL\tGT\t0|1\n4\t91931666\tSI_BD_4573\tT\t<CN0>\t100\tPASS\tAC=1284;AF=0.25639;AFR_AF=0.0537;AMR_AF=0.2205;AN=5008;CIEND=-50,119;CIPOS=-119,50;CS=DEL_union;EAS_AF=0.3919;END=91933538;EUR_AF=0.3936;MC=BI_GS_DEL1_B5_P0785_952;NS=2504;SAS_AF=0.2751;SVTYPE=DEL\tGT\t0|1\n4\t91933849\tUW_VH_11348\tT\t<CN0>\t100\tPASS\tAC=1285;AF=0.256589;AFR_AF=0.0545;AMR_AF=0.2205;AN=5008;CIEND=0,341;CIPOS=-2362,0;CS=DEL_union;EAS_AF=0.3919;END=91936097;EUR_AF=0.3936;MC=BI_GS_DEL1_B2_P0785_572,UW_VH_2153,UW_VH_388;NS=2504;SAS_AF=0.2751;SVTYPE=DEL\tGT\t0|1\n4\t93393064\tDEL_pindel_12560\tTTTATCCATATTTCTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCGGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCAGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCCG\tT\t.\tPASS\tAC=1652;AF=0.329872;AFR_AF=0.4592;AMR_AF=0.2349;AN=5008;CS=DEL_pindel;EAS_AF=0.2292;END=93393384;EUR_AF=0.3022;MEINFO=AluYa4b,1,281,-;NS=2504;SAS_AF=0.3548;SITEPOST=0.9998;SVTYPE=DEL_ALU\tGT\t1|1\n4\t94439081\tDEL_pindel_12582\tTATGTATGTATATACATACATGTATATGTATGTATATACATACATGTACATGTATGTATATACATACATGTATATGTATGTATATACATACATGTAC\tT\t.\tPASS\tAC=1176;AF=0.234824;AFR_AF=0.1573;AMR_AF=0.2248;AN=5008;CS=DEL_pindel;EAS_AF=0.2123;END=94439177;EUR_AF=0.3598;NS=2504;SAS_AF=0.2413;SITEPOST=0.9929;SVTYPE=DEL\tGT\t0|1\n4\t95498964\tDEL_pindel_12603\tAAACTCTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC\tA\t.\tPASS\tAC=4429;AF=0.884385;AFR_AF=0.8434;AMR_AF=0.8833;AN=5008;CS=DEL_pindel;EAS_AF=0.9315;END=95499280;EUR_AF=0.8777;MEINFO=AluYa5,1,281,-;NS=2504;SAS_AF=0.8988;SITEPOST=0.9998;SVTYPE=DEL_ALU\tGT\t0|1\n4\t96382454\tDEL_pindel_12608\tTGAAGCACAAGGCAAGAGCAAGTTGAATAGATGACAAAGGAGAGAAATCAAAAAAAGAAGATGTTATGCTCTGTTACTAAAATACTGTATTGTGAACATATTGTAATCAAATATAATTAGAAAAATATTCCCAAAGTAAAATTATAAATTATTGTTGGCTTGTCTAAAATACAATTACAATCCAAACAAGAGAATCAAGTATTTACA\tT\t.\tPASS\tAC=1358;AF=0.271166;AFR_AF=0.3502;AMR_AF=0.1311;AN=5008;CS=DEL_pindel;EAS_AF=0.376;END=96382660;EUR_AF=0.161;NS=2504;SAS_AF=0.2689;SITEPOST=1;SVTYPE=DEL\tGT\t1|0\n4\t98110644\tDEL_pindel_12636\tATTTGCTGTAGAGGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCATGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCTGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAG\tA\t.\tPASS\tAC=2134;AF=0.426118;AFR_AF=0.6573;AMR_AF=0.2738;AN=5008;CS=DEL_pindel;EAS_AF=0.3423;END=98110970;EUR_AF=0.3052;MEINFO=AluYa5,1,281,+;NS=2504;SAS_AF=0.4325;SITEPOST=0.9956;SVTYPE=DEL_ALU\tGT\t1|0\n4\t98133375\tDEL_pindel_12638\tTAGGAACTTAATTCTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC\tT\t.\tPASS\tAC=1890;AF=0.377396;AFR_AF=0.5537;AMR_AF=0.2651;AN=5008;CS=DEL_pindel;EAS_AF=0.3115;END=98133689;EUR_AF=0.2833;MEINFO=AluYa5,1,281,-;NS=2504;SAS_AF=0.3834;SITEPOST=0.9995;SVTYPE=DEL_ALU\tGT\t1|0\n4\t98181261\tDEL_pindel_12640\tTAAAATTATACCCTGCTGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAA\tT\t.\tPASS\tAC=845;AF=0.16873;AFR_AF=0.2602;AMR_AF=0.0807;AN=5008;CS=DEL_pindel;EAS_AF=0.121;END=98181582;EUR_AF=0.0924;MEINFO=AluYa5,1,281,+;NS=2504;SAS_AF=0.2352;SITEPOST=0.9997;SVTYPE=DEL_ALU\tGT\t1|0\n4\t98354318\tDUP_gs_CNV_4_98354318_98359087\tG\t<CN0>,<CN2>\t.\tPASS\tAC=551,2;AF=0.110024,0.00039936;AFR_AF=0.0431,0;AMR_AF=0.0576,0;AN=5008;CS=DUP_gs;EAS_AF=0.1111,0.001;END=98359087;EUR_AF=0.1322,0;MC=UW_VH_2737,YL_CN_FIN_964,BI_GS_DEL1_B1_P0792_297,EM_DL_DEL72527;NS=2504;SAS_AF=0.2137,0.001;SITEPOST=1;SVTYPE=CNV\tGT\t1|0\n4\t98590652\tDEL_pindel_12651\tTGAAAGTTTATTGCGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGCGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCCGGCCTGGGCAACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAA\tT\t.\tPASS\tAC=2759;AF=0.550919;AFR_AF=0.584;AMR_AF=0.5548;AN=5008;CS=DEL_pindel;EAS_AF=0.4752;END=98590970;EUR_AF=0.4891;MEINFO=AluYb6_2,1,281,+;NS=2504;SAS_AF=0.6452;SITEPOST=0.99605;SVTYPE=DEL_ALU\tGT\t1|0\n4\t100023042\tDEL_pindel_12685\tAAAAAAACCGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGCGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGAGATCGTGCCACTGCAGTCCGCAGTCCGGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAG\tA\t.\tPASS\tAC=3000;AF=0.599042;AFR_AF=0.59;AMR_AF=0.5274;AN=5008;CS=DEL_pindel;EAS_AF=0.6786;END=100023377;EUR_AF=0.5288;MEINFO=AluYb,1,281,+;NS=2504;SAS_AF=0.6524;SITEPOST=0.9428;SVTYPE=DEL_ALU\tGT\t0|1\n4\t100070288\tDEL_pindel_12686\tTGAAAAGACCCCTTTCTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC\tT\t.\tPASS\tAC=3570;AF=0.712859;AFR_AF=0.7466;AMR_AF=0.7133;AN=5008;CS=DEL_pindel;EAS_AF=0.6776;END=100070604;EUR_AF=0.7117;MEINFO=AluYa5,1,281,-;NS=2504;SAS_AF=0.7045;SITEPOST=0.9573;SVTYPE=DEL_ALU\tGT\t1|0\n4\t101244846\tDEL_pindel_12706\tATTCTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTTTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGCGATCTCGACTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGTGTAGCTGGGACTACAGGCGCGCGCCACCATGCCCGGCTAATTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGTCTCGGCC\tA\t.\tPASS\tAC=2877;AF=0.574481;AFR_AF=0.6747;AMR_AF=0.5259;AN=5008;CS=DEL_pindel;EAS_AF=0.245;END=101245110;EUR_AF=0.7624;MEINFO=AluYg6,45,281,-;NS=2504;SAS_AF=0.6196;SITEPOST=0.9996;SVTYPE=DEL_ALU\tGT\t1|1\n4\t101293066\tDEL_pindel_12708\tGGATTTAAGTGAGGCCTTAACTATAGAGTCTTTTGTATAATACCCCATCATGATTGTGCCAACCTCTACCA\tG\t.\tPASS\tAC=593;AF=0.118411;AFR_AF=0.0719;AMR_AF=0.1542;AN=5008;CS=DEL_pindel;EAS_AF=0.003;END=101293136;EUR_AF=0.2137;NS=2504;SAS_AF=0.1769;SITEPOST=0.9988;SVTYPE=DEL\tGT\t0|1\n4\t101390634\tDEL_pindel_12710\tAAAATGAAAAAGCAGCTTACAAATTGAGAAAAATAATTTGTAAATTATATATCTGATAAGGAGTTAATAGTCAAAGTTTATAAAATAATTATTTAATTTAAGTCTTTAATCTATCGAGTTAATTTTTGAATATGGTGTAAAGAAGGGGTACAGTTTTAATCTTCTGCATATGGCTAGCC\tA\t.\tPASS\tAC=1260;AF=0.251597;AFR_AF=0.0552;AMR_AF=0.2594;AN=5008;CS=DEL_pindel;EAS_AF=0.1399;END=101390812;EUR_AF=0.508;NS=2504;SAS_AF=0.363;SITEPOST=0.9998;SVTYPE=DEL\tGT\t1|0\n4\t102712356\tDEL_pindel_12740\tGTGTCTGCAACTTCTGAGGAGCTGGAACTTTCCCCAGCACCCGGGTCAGGGTCC\tG\t.\tPASS\tAC=120;AF=0.0239617;AFR_AF=0.0023;AMR_AF=0.0202;AN=5008;CS=DEL_pindel;EAS_AF=0.0278;END=102712409;EUR_AF=0.0338;NS=2504;SAS_AF=0.0419;SITEPOST=0.9996;SVTYPE=DEL\tGT\t1|0\n4\t102787786\tDEL_pindel_12742\tTAGGAATACCATTTGACCCAGCCATCCCATTACTGGGTATATACCCAAAGGACTATAAATCATGCTGCTATAAAGACACATGCACACGTATGTTTATTGCAGCACTATTCACAATAGCAAAGACTTGGAACCAACCCAAATGTCCAACAATGATAGACTGGATTAAGAAAATGTGGCACATATACACCATGGAATACTATGCAGCCATAAAAAATGATGAGTTCATATCCTTTGTAGGGACATGGATGAAATTGGAAACCATCATTCTCAGTAAACTATCGCAAGAACAAAAAACCAAACGCCGCATATTCTCACTCATAGGTGGGAATTGAACAATGAGATCACATGGACACAGGAAGGGGAATATCACACTCTGGGGACTGTGGTGGGGTCGGGGGAGGGGGGAGGGATAGCATTGGGAGATATACCTAATGCTAGATGACACATTAGTGGGTGCAGTGCACCAGCATGGCACATGTATACATATGTAACTAACCTGCACAATGTGCACATGTACCCTAAAACTTAGAGTATAATAAAAAAAATTTAAAAAAAAAAAAAAAAAA\tT\t.\tPASS\tAC=1934;AF=0.386182;AFR_AF=0.5401;AMR_AF=0.2622;AN=5008;CS=DEL_pindel;EAS_AF=0.3304;END=102788351;EUR_AF=0.3688;MEINFO=LINE1,5537,5600,+;NS=2504;SAS_AF=0.3415;SITEPOST=0.9992;SVTYPE=DEL_LINE1\tGT\t1|1\n4\t104894032\tSI_BD_4644\tT\t<CN0>\t100\tPASS\tAC=3389;AF=0.676717;AFR_AF=0.5666;AMR_AF=0.6729;AN=5008;CIEND=-50,268;CIPOS=-268,65;CS=DEL_union;EAS_AF=0.8393;END=104894690;EUR_AF=0.5964;NS=2504;SAS_AF=0.7434;SVTYPE=DEL\tGT\t1|1\n4\t106507402\tALU_umary_ALU_3574\tA\t<INS:ME:ALU>\t.\t.\tAC=313;AF=0.0625;AFR_AF=0.1362;AMR_AF=0.0447;AN=5008;CS=ALU_umary;EAS_AF=0.003;EUR_AF=0.0696;MEINFO=AluUndef,5,273,+;NS=2504;SAS_AF=0.0297;SITEPOST=1;SVLEN=268;SVTYPE=ALU;TSD=AAGAAATGCAAACA\tGT\t0|1\n4\t106636862\tALU_umary_ALU_3576\tA\t<INS:ME:ALU>\t.\t.\tAC=401;AF=0.0800719;AFR_AF=0.1694;AMR_AF=0.0533;AN=5008;CS=ALU_umary;EAS_AF=0.0476;EUR_AF=0.0567;MEINFO=AluYa5,1,281,+;NS=2504;SAS_AF=0.0358;SITEPOST=1;SVLEN=280;SVTYPE=ALU;TSD=AAAATATTAAAGA\tGT\t1|0\n4\t107437718\tBI_GS_DEL1_B1_P0801_364\tT\t<CN0>\t100\tPASS\tAC=1553;AF=0.310104;AFR_AF=0.1445;AMR_AF=0.4308;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.3621;END=107438504;EUR_AF=0.3161;MC=SI_BD_4656,EM_DL_DEL10797593;NS=2504;SAS_AF=0.3885;SVTYPE=DEL\tGT\t0|1\n4\t107840622\tDEL_pindel_12849\tAAGTGAGCTGCATCAGAGATTGTTGTCAAACTAATAAATCTTCTGAGGTTCTATCGAACCAGCAGTCATTCTAGTGGGAAACTGCTCAGGCCATAGCTGCTGAAGAAGTTCTAGCTCACCCAGGCATCTGGAAACCCTATGGCTGAGACAGAGCAAAATATGGAATAAGGAAGAAAAATTTTAGCTATTAACCTGAAGATTTTAAACTTTGATGTCTTTGGGCTCTTTATCATAAACAGGAAGATAATGATTGCAGACTTTAATTCTTTTGAACTTCAAGTTATTTTGACTTTAACATGCAAGAGGATTTAATTTTTGTCCTTTACTTTCTCCCTAAGAAATTTTC\tA\t.\tPASS\tAC=81;AF=0.0161741;AFR_AF=0.0242;AMR_AF=0.0202;AN=5008;CS=DEL_pindel;EAS_AF=0;END=107840967;EUR_AF=0.0298;NS=2504;SAS_AF=0.0051;SITEPOST=0.9999;SVTYPE=DEL\tGT\t0|1\n4\t111383200\tDEL_pindel_12899\tGCTATGGCTCACACTATCTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCACTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCCGA\tG\t.\tPASS\tAC=3645;AF=0.727835;AFR_AF=0.8033;AMR_AF=0.7839;AN=5008;CS=DEL_pindel;EAS_AF=0.5724;END=111383532;EUR_AF=0.825;MEINFO=AluYa5,1,281,-;NS=2504;SAS_AF=0.6462;SITEPOST=0.9996;SVTYPE=DEL_ALU\tGT\t1|1\n4\t111516319\tDEL_pindel_12900\tAATATCCTACATTAGTGTAAGTCTAGAAGTGGATTATTAATAGATGATATGAAACCTTTATTCAATTGATGTAGCCAAAAAACACATAACATTTTTAAACAGTCTTACCATTGCCTCATGTTGAGATTGCTGCATAACAAATTATCCCATAACTTAGCCTGGTGTCATGGTGCATGTCTGTAGTCACAGCT\tA\t.\tPASS\tAC=3991;AF=0.796925;AFR_AF=0.469;AMR_AF=0.9323;AN=5008;CS=DEL_pindel;EAS_AF=0.869;END=111516509;EUR_AF=0.9612;NS=2504;SAS_AF=0.9008;SITEPOST=0.9992;SVTYPE=DEL\tGT\t1|1\n4\t113348500\tDEL_pindel_12930\tATTATATACATGTTTGATATAAAACATGTATTTTTAAAAATAGTATTTTTAAAAATAGTATTT\tA\t.\tPASS\tAC=2618;AF=0.522764;AFR_AF=0.5484;AMR_AF=0.4755;AN=5008;CS=DEL_pindel;EAS_AF=0.6062;END=113348562;EUR_AF=0.4861;NS=2504;SAS_AF=0.4734;SITEPOST=0.9924;SVTYPE=DEL\tGT\t1|1\n4\t113469974\tDEL_pindel_12932\tTAAAAATGTAAAGATGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAA\tT\t.\tPASS\tAC=2960;AF=0.591054;AFR_AF=0.5303;AMR_AF=0.5951;AN=5008;CS=DEL_pindel;EAS_AF=0.7163;END=113470281;EUR_AF=0.4841;MEINFO=AluYa4_5,1,281,+;NS=2504;SAS_AF=0.6513;SITEPOST=0.9929;SVTYPE=DEL_ALU\tGT\t1|0\n4\t115549930\tALU_umary_ALU_3613\tG\t<INS:ME:ALU>\t.\t.\tAC=1939;AF=0.387181;AFR_AF=0.2277;AMR_AF=0.4193;AN=5008;CS=ALU_umary;EAS_AF=0.4812;EUR_AF=0.4155;MEINFO=AluUndef,16,281,+;NS=2504;SAS_AF=0.454;SITEPOST=1;SVLEN=265;SVTYPE=ALU;TSD=AAGAAAG\tGT\t0|1\n4\t115624597\tDEL_pindel_12953\tAAAGTCTATCTTGTTTTGTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCCGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCCAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCAC\tA\t.\tPASS\tAC=3904;AF=0.779553;AFR_AF=0.6914;AMR_AF=0.7939;AN=5008;CS=DEL_pindel;EAS_AF=0.8165;END=115624870;EUR_AF=0.8101;MEINFO=AluYb6_2,56,281,-;NS=2504;SAS_AF=0.819;SITEPOST=0.98485;SVTYPE=DEL_ALU\tGT\t0|1\n4\t115743887\tDEL_pindel_12955\tGCCAGGCTTTGGTGATATATGAGATTTTAGGCATTAGAAAAACAATAAAAGTTTTTGAATGGAAATTAATAACATATAAATATCTTATTTCAGGCATAAAATGTTGTGTATTTGCAGTTTTAAAAATGCAGAAAACAGGCTGGGCAGCTGTGGCTCATGCCTGTAACCCCAGCACTTTGGGAGGCTGAGGTGGGTGGATCACCTGAGGTCAGGAGTTTGAGACCAGCCTGGCTAACATGGTGAAAC\tG\t.\tPASS\tAC=1193;AF=0.238219;AFR_AF=0.1067;AMR_AF=0.3242;AN=5008;CS=DEL_pindel;EAS_AF=0.1587;END=115744132;EUR_AF=0.4364;NS=2504;SAS_AF=0.2331;SITEPOST=0.999;SVTYPE=DEL\tGT\t1|1\n4\t115928726\tBI_GS_DEL1_B1_P0809_782\tT\t<CN0>\t100\tPASS\tAC=1981;AF=0.395567;AFR_AF=0.3759;AMR_AF=0.3112;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.4315;END=115931880;EUR_AF=0.336;MC=YL_CN_CEU_1237,UW_VH_4628,YL_CN_JPT_1120,UW_VH_13768;NS=2504;SAS_AF=0.5061;SVTYPE=DEL\tGT\t1|1\n4\t117251478\tDEL_pindel_12990\tACAAAATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGCGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGC\tA\t.\tPASS\tAC=3263;AF=0.651558;AFR_AF=0.5212;AMR_AF=0.7262;AN=5008;CS=DEL_pindel;EAS_AF=0.6964;END=117251795;EUR_AF=0.7654;MEINFO=AluYa4_5,2,281,-;NS=2504;SAS_AF=0.6115;SITEPOST=0.9944;SVTYPE=DEL_ALU\tGT\t1|0\n4\t119125417\tBI_GS_DEL1_B2_P0813_103\tG\t<CN0>\t100\tPASS\tAC=784;AF=0.15655;AFR_AF=0.1649;AMR_AF=0.1354;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.0536;END=119130206;EUR_AF=0.1869;MC=SI_BD_4727,UW_VH_2365,YL_CN_STU_1016;NS=2504;SAS_AF=0.2352;SVTYPE=DEL\tGT\t1|0\n4\t119296342\tDEL_pindel_13022\tTGTCTTTCATTGTTTTTTTTTTTTTATTTTTTTTTTTTTTATTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGTGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC\tT\t.\tPASS\tAC=1458;AF=0.291134;AFR_AF=0.2587;AMR_AF=0.2824;AN=5008;CS=DEL_pindel;EAS_AF=0.3036;END=119296678;EUR_AF=0.2813;MEINFO=AluYa4_4,1,281,-;NS=2504;SAS_AF=0.3384;SITEPOST=0.9999;SVTYPE=DEL_ALU\tGT\t1|0\n4\t119774736\tALU_umary_ALU_3640\tT\t<INS:ME:ALU>\t.\t.\tAC=355;AF=0.0708866;AFR_AF=0.0053;AMR_AF=0.062;AN=5008;CS=ALU_umary;EAS_AF=0.0813;EUR_AF=0.1183;MEINFO=AluUndef,1,281,-;NS=2504;SAS_AF=0.1063;SITEPOST=1;SVLEN=280;SVTYPE=ALU;TSD=CTCTAGTTTAGAACTTTTCT\tGT\t1|0\n4\t120017235\tDEL_pindel_13035\tTAAAAGATGCTGCAATGAGGCCGGGCGCGGTGGCTCACGCCTGTAACCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAAATTAGCCGGGCGTGGTGGCGGGCGCCTGTCGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAA\tT\t.\tPASS\tAC=3112;AF=0.621406;AFR_AF=0.4501;AMR_AF=0.67;AN=5008;CS=DEL_pindel;EAS_AF=0.6835;END=120017555;EUR_AF=0.7127;MEINFO=AluYa4_3,1,281,+;NS=2504;SAS_AF=0.6605;SITEPOST=0.9799;SVTYPE=DEL_ALU\tGT\t1|1\n4\t120639904\tALU_umary_ALU_3643\tA\t<INS:ME:ALU>\t.\t.\tAC=1659;AF=0.33127;AFR_AF=0.2995;AMR_AF=0.2594;AN=5008;CS=ALU_umary;EAS_AF=0.2659;EUR_AF=0.3509;MEINFO=AluYa4_2,1,281,+;NS=2504;SAS_AF=0.4724;SITEPOST=1;SVLEN=280;SVTYPE=ALU;TSD=AAACACCTTCA\tGT\t1|0\n4\t120865434\tBI_GS_DEL1_B4_P0814_173\tG\t<CN0>\t100\tPASS\tAC=313;AF=0.0625;AFR_AF=0.0461;AMR_AF=0.0519;AN=5008;CIEND=-6,7;CIPOS=-6,7;CS=DEL_union;EAS_AF=0.0188;END=120866627;EUR_AF=0.0606;MC=UW_VH_16088,EM_DL_DEL10803535,UW_VH_2457,SI_BD_4739;NS=2504;SAS_AF=0.1391;SVTYPE=DEL\tGT\t1|0\n4\t121407647\tDEL_pindel_13050\tTTCACACAAATCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCCC\tT\t.\tPASS\tAC=823;AF=0.164337;AFR_AF=0.0938;AMR_AF=0.1772;AN=5008;CS=DEL_pindel;EAS_AF=0.0962;END=121407970;EUR_AF=0.2843;MEINFO=AluYa3_4,1,281,-;NS=2504;SAS_AF=0.1973;SITEPOST=0.9999;SVTYPE=DEL_ALU\tGT\t1|0\n4\t121582257\tALU_umary_ALU_3646\tT\t<INS:ME:ALU>\t.\t.\tAC=906;AF=0.180911;AFR_AF=0.0946;AMR_AF=0.121;AN=5008;CS=ALU_umary;EAS_AF=0.3671;EUR_AF=0.1372;MEINFO=AluYb8,1,277,-;NS=2504;SAS_AF=0.1933;SITEPOST=1;SVLEN=276;SVTYPE=ALU;TSD=TACTGCTTGTCTT\tGT\t0|1\n4\t121808929\tDEL_pindel_13061\tAGACATTTTATCCTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC\tA\t.\tPASS\tAC=2051;AF=0.409545;AFR_AF=0.5703;AMR_AF=0.4035;AN=5008;CS=DEL_pindel;EAS_AF=0.373;END=121809246;EUR_AF=0.2913;MEINFO=AluYa4_5,1,281,-;NS=2504;SAS_AF=0.3558;SITEPOST=0.9995;SVTYPE=DEL_ALU\tGT\t0|1\n4\t125867361\tDEL_pindel_13141\tTAAGAGATTTTTCTGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCGCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA\tT\t.\tPASS\tAC=3487;AF=0.696286;AFR_AF=0.6831;AMR_AF=0.6888;AN=5008;CS=DEL_pindel;EAS_AF=0.7609;END=125867690;EUR_AF=0.6302;MEINFO=AluYa4_5,1,281,+;NS=2504;SAS_AF=0.7209;SITEPOST=0.95865;SVTYPE=DEL_ALU\tGT\t1|0\n4\t130062076\tUW_VH_2792\tT\t<CN0>\t100\tPASS\tAC=6;AF=0.00119808;AFR_AF=0;AMR_AF=0;AN=5008;CIEND=0,88;CIPOS=-84,0;CS=DEL_union;EAS_AF=0.001;END=130069013;EUR_AF=0.005;MC=YL_CN_TSI_962,BI_GS_DEL1_B1_P0824_49;NS=2504;SAS_AF=0;SVTYPE=DEL\tGT\t0|1\n4\t130066189\tUW_VH_3876\tA\t<CN0>\t100\tPASS\tAC=1607;AF=0.320887;AFR_AF=0.2307;AMR_AF=0.3746;AN=5008;CIEND=0,94;CIPOS=-245,0;CS=DEL_union;EAS_AF=0.3472;END=130068435;EUR_AF=0.3201;MC=EM_DL_DEL73629,BI_GS_DEL1_B1_P0824_54,YL_CN_GBR_992;NS=2504;SAS_AF=0.3783;SVTYPE=DEL\tGT\t0|1\n4\t130590920\tDEL_pindel_13231\tTAAGAAGTTCTTCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGCGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCCGACCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAA\tT\t.\tPASS\tAC=2617;AF=0.522564;AFR_AF=0.7186;AMR_AF=0.5548;AN=5008;CS=DEL_pindel;EAS_AF=0.4058;END=130591211;EUR_AF=0.4085;MEINFO=AluYb6_2,25,281,+;NS=2504;SAS_AF=0.4724;SITEPOST=0.9948;SVTYPE=DEL_ALU\tGT\t1|0\n4\t131611192\tDEL_pindel_13247\tTTATATATATATATATATATATATATATATATATATATATATACACATATATATATATATACATATATATATATATATATATACACATATATATATATATACATATGTATATATATATATATACATATATATATATATATATATACACATATATATATATATACATATA\tT\t.\tPASS\tAC=3357;AF=0.670327;AFR_AF=0.6165;AMR_AF=0.6527;AN=5008;CS=DEL_pindel;EAS_AF=0.7321;END=131611360;EUR_AF=0.675;NS=2504;SAS_AF=0.6871;SITEPOST=0.91045;SVTYPE=DEL\tGT\t0|1\n4\t131694825\tDEL_pindel_13249\tTAAGAAATATAGAAGGAGATCGAAACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAATACAAAAAAAATTAGCCGGGCGCGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAAGTCCCGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAA\tT\t.\tPASS\tAC=2776;AF=0.554313;AFR_AF=0.5567;AMR_AF=0.5807;AN=5008;CS=DEL_pindel;EAS_AF=0.5188;END=131695074;EUR_AF=0.5885;MEINFO=AluY,71,281,+;NS=2504;SAS_AF=0.5337;SITEPOST=0.9812;SVTYPE=DEL_ALU\tGT\t1|0\n4\t133180785\tUW_VH_2928\tC\t<CN0>\t100\tPASS\tAC=2037;AF=0.406749;AFR_AF=0.4788;AMR_AF=0.3833;AN=5008;CIEND=0,484;CIPOS=-448,0;CS=DEL_union;EAS_AF=0.4038;END=133182979;EUR_AF=0.3827;MC=BI_GS_DEL1_B4_P0827_35,YL_CN_JPT_1142,YL_CN_ASW_1087,SI_BD_4793,YL_CN_YRI_1344,YL_CN_PJL_1062,EM_DL_DEL73743;NS=2504;SAS_AF=0.3538;SVTYPE=DEL\tGT\t1|0\n4\t133619876\tDEL_pindel_13289\tTGATACTTGCATTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGTTCTGTCGCCCAGGCGGGAGTGCTGTGGCGCGATCTCCGCTCACTGCAAGCTCCGCCTTCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACTGCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC\tT\t.\tPASS\tAC=3033;AF=0.605631;AFR_AF=0.5567;AMR_AF=0.6138;AN=5008;CS=DEL_pindel;EAS_AF=0.6319;END=133620182;EUR_AF=0.6789;MEINFO=AluYa1_1,1,281,-;NS=2504;SAS_AF=0.5634;SITEPOST=0.99;SVTYPE=DEL_ALU\tGT\t1|0\n4\t133819597\tDEL_pindel_13295\tTAAAAATGGCTGGAGGAGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTGGTAGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCGCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAA\tT\t.\tPASS\tAC=2765;AF=0.552117;AFR_AF=0.556;AMR_AF=0.5591;AN=5008;CS=DEL_pindel;EAS_AF=0.5744;END=133819920;EUR_AF=0.5487;MEINFO=AluYc1,1,281,+;NS=2504;SAS_AF=0.5225;SITEPOST=0.9955;SVTYPE=DEL_ALU\tGT\t1|0\n4\t134295543\tDEL_pindel_13312\tAATAAATTTGTATTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTTGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGCGATCTCGGCTCACTGCAAGCTCCGCCTCCCAGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCTACCACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC\tA\t.\tPASS\tAC=1341;AF=0.267772;AFR_AF=0.2322;AMR_AF=0.2507;AN=5008;CS=DEL_pindel;EAS_AF=0.2976;END=134295863;EUR_AF=0.2942;MEINFO=AluYc1,1,281,-;NS=2504;SAS_AF=0.2699;SITEPOST=0.9986;SVTYPE=DEL_ALU\tGT\t1|0\n4\t134596423\tL1_umary_LINE1_967\tA\t<INS:ME:LINE1>\t.\t.\tAC=1655;AF=0.330471;AFR_AF=0.0431;AMR_AF=0.3804;AN=5008;CS=L1_umary;EAS_AF=0.4524;EUR_AF=0.3638;MEINFO=LINE1,5598,5990,-;NS=2504;SAS_AF=0.5235;SITEPOST=1;SVLEN=392;SVTYPE=LINE1;TSD=A\tGT\t0|1\n4\t135433008\tBI_GS_DEL1_B4_P0829_90\tT\t<CN0>\t100\tPASS\tAC=3168;AF=0.632588;AFR_AF=0.5098;AMR_AF=0.5519;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.9802;END=135435698;EUR_AF=0.5517;MC=UW_VH_19549,UW_VH_5412,YL_CN_ASW_1089,UW_VH_15861,UW_VH_18323,UW_VH_1747,YL_CN_CDX_904,YL_CN_PJL_1066,EM_DL_DEL73790,SI_BD_4805;NS=2504;SAS_AF=0.5808;SVTYPE=DEL\tGT\t1|1\n4\t138091987\tBI_GS_DEL1_B1_P0832_68\tG\t<CN0>\t100\tPASS\tAC=846;AF=0.16893;AFR_AF=0.1331;AMR_AF=0.1945;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.1369;END=138100624;EUR_AF=0.17;MC=UW_VH_20415,YL_CN_GIH_793,UW_VH_422,UW_VH_8383,EM_DL_DEL73854,SI_BD_4816;NS=2504;SAS_AF=0.2311;SVTYPE=DEL\tGT\t0|1\n4\t138177334\tL1_umary_LINE1_971\tA\t<INS:ME:LINE1>\t.\t.\tAC=2184;AF=0.436102;AFR_AF=0.413;AMR_AF=0.4481;AN=5008;CS=L1_umary;EAS_AF=0.3651;EUR_AF=0.4652;MEINFO=LINE1,4508,6008,+;NS=2504;SAS_AF=0.502;SITEPOST=1;SVLEN=1500;SVTYPE=LINE1;TSD=AAGAAAGCTA\tGT\t0|1\n4\t138299005\tALU_umary_ALU_3748\tA\t<INS:ME:ALU>\t.\t.\tAC=1806;AF=0.360623;AFR_AF=0.4569;AMR_AF=0.353;AN=5008;CS=ALU_umary;EAS_AF=0.3948;EUR_AF=0.327;MEINFO=AluUndef,5,277,+;NS=2504;SAS_AF=0.2352;SITEPOST=1;SVLEN=272;SVTYPE=ALU;TSD=AAGAATAATGTTACCA\tGT\t0|1\n4\t138966189\tBI_GS_DEL1_B2_P0832_644\tA\t<CN0>\t100\tPASS\tAC=1374;AF=0.274361;AFR_AF=0.1914;AMR_AF=0.3357;AN=5008;CIEND=0,1;CIPOS=0,1;CS=DEL_union;EAS_AF=0.1786;END=138967210;EUR_AF=0.3827;MC=UW_VH_423,SI_BD_4820,EM_DL_DEL10810667;NS=2504;SAS_AF=0.3303;SVTYPE=DEL\tGT\t1|0\n4\t141497059\tDEL_pindel_13448\tCAGGCCCTCCTGTGTCCGTCTATTGATCCTGAGTGTCTGGGAAAGATGAAGCTCCCACACCAGGACAA\tC\t.\tPASS\tAC=150;AF=0.0299521;AFR_AF=0.0045;AMR_AF=0.0447;AN=5008;CS=DEL_pindel;EAS_AF=0.003;END=141497126;EUR_AF=0.0736;NS=2504;SAS_AF=0.0368;SITEPOST=0.99895;SVTYPE=DEL\tGT\t1|0\n4\t142230774\tUW_VH_23251\tT\t<CN0>\t100\tPASS\tAC=1908;AF=0.38099;AFR_AF=0.5106;AMR_AF=0.2421;AN=5008;CIEND=0,332;CIPOS=-298,0;CS=DEL_union;EAS_AF=0.3224;END=142233063;EUR_AF=0.3837;MC=YL_CN_TSI_975,UW_VH_19550,UW_VH_18573,BI_GS_DEL1_B1_P0836_209,YL_CN_GIH_795,EM_DL_DEL73948,UW_VH_17903,UW_VH_21239,YL_CN_ASW_1098,UW_VH_7242,UW_VH_2659,SI_BD_4838,YL_CN_MXL_903,UW_VH_4350,YL_CN_PUR_1248;NS=2504;SAS_AF=0.362;SVTYPE=DEL\tGT\t0|1\n4\t143029543\tDEL_pindel_13495\tCACCTCAAATATCCTCACAATCATCAAATGTGAACCTAGATAAAATACCATGTATAAA\tC\t.\tPASS\tAC=2546;AF=0.508387;AFR_AF=0.1649;AMR_AF=0.67;AN=5008;CS=DEL_pindel;EAS_AF=0.5734;END=143029600;EUR_AF=0.6809;NS=2504;SAS_AF=0.6135;SITEPOST=0.9998;SVTYPE=DEL\tGT\t1|1\n4\t145316454\tUW_VH_425\tC\t<CN0>\t100\tPASS\tAC=2232;AF=0.445687;AFR_AF=0.5061;AMR_AF=0.4683;AN=5008;CIEND=0,452;CIPOS=-483,0;CS=DEL_union;EAS_AF=0.4593;END=145319900;EUR_AF=0.3976;MC=BI_GS_DEL1_B1_P0839_253,YL_CN_ITU_1032,SI_BD_4852;NS=2504;SAS_AF=0.3834;SVTYPE=DEL\tGT\t1|1\n4\t146438780\tBI_GS_DEL1_B1_P0840_365\tT\t<CN0>\t100\tPASS\tAC=1209;AF=0.241414;AFR_AF=0.0923;AMR_AF=0.2767;AN=5008;CIEND=-5,5;CIPOS=-5,5;CS=DEL_union;EAS_AF=0.0992;END=146440426;EUR_AF=0.4622;MC=YL_CN_GBR_1004,UW_VH_18807,EM_DL_DEL10813171,UW_VH_10243,UW_VH_2660,UW_VH_4911,UW_VH_426,UW_VH_4239;NS=2504;SAS_AF=0.3374;SVTYPE=DEL\tGT\t1|1\n4\t147225296\tL1_umary_LINE1_985\tG\t<INS:ME:LINE1>\t.\t.\tAC=2992;AF=0.597444;AFR_AF=0.6256;AMR_AF=0.6225;AN=5008;CS=L1_umary;EAS_AF=0.5923;EUR_AF=0.5666;MEINFO=LINE1,11,6007,+;NS=2504;SAS_AF=0.5787;SITEPOST=1;SVLEN=5996;SVTYPE=LINE1;TSD=AAGAAGTTAAAATAG\tGT\t0|1\n4\t148053950\tALU_umary_ALU_3796\tT\t<INS:ME:ALU>\t.\t.\tAC=2217;AF=0.442692;AFR_AF=0.2837;AMR_AF=0.5231;AN=5008;CS=ALU_umary;EAS_AF=0.4663;EUR_AF=0.5467;MEINFO=AluYa5,9,281,+;NS=2504;SAS_AF=0.4693;SITEPOST=1;SVLEN=272;SVTYPE=ALU;TSD=AAGAGTAAAGCT\tGT\t1|0\n4\t150161039\tDEL_pindel_13614\tTAAAACTGGGCTGCTCTAGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAATACAAAAAAAAAATTACCCGGGCGCGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCTGGGAAGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCCGACCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA\tT\t.\tPASS\tAC=2886;AF=0.576278;AFR_AF=0.6649;AMR_AF=0.4928;AN=5008;CS=DEL_pindel;EAS_AF=0.5248;END=150161381;EUR_AF=0.6103;MEINFO=AluYb6_2,1,281,+;NS=2504;SAS_AF=0.5337;SITEPOST=0.9898;SVTYPE=DEL_ALU\tGT\t1|0\n4\t150951027\tDEL_pindel_13622\tTTAAAGTATTTTTAGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACACGGTGAAACCCCGTCTCTACTAAAAATGCAAAAAATTAGCCGGGCGTGGTGGCGGGCGCCTGTAGTCCCAGCTGCTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCGTGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAACAAA\tT\t.\tPASS\tAC=4065;AF=0.811701;AFR_AF=0.8487;AMR_AF=0.8228;AN=5008;CS=DEL_pindel;EAS_AF=0.7143;END=150951349;EUR_AF=0.831;MEINFO=AluYj3,1,281,+;NS=2504;SAS_AF=0.8344;SITEPOST=0.9717;SVTYPE=DEL_ALU\tGT\t1|0\n4\t152340705\tDEL_pindel_13645\tGGTCTGTTCCTCATTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTATTATACTCTAAGTTTTAGGGTACATGTGCACATTGTGCAGGCTAGTTACATATGTATACATGTGCCATGCTGGTGCGCTGCACCCACTAATGTGTCATCTAGCATTAGGTATATCTCCCAATGCTATCCCTCCCCCCTCCCCCGACCCCACCACAGTCCCCAGAGTGTGATATTCCCCTTCCTGTGTCCATGTGATCTCATTGTTCAATTCCCACCTATGAGTGAGAATATGCGGTGTTTGGTTTTTTGTTCTTGCGATAGTTTACTGAGAATGATGGTTTCCAATTTCATCCATGTCCCTACAAAGGATATGAACTCATCATTTTTTATGGCTGCATAGTATTCCATGGTGTATATGTGCCACATTTTCTTAATCCAGTCTATCATTGTTGGACATTTGGGTTGGTTCCAAGTCTTTGCTATTGTGAATAGTGCCGCAATAAACATACGTGTGCATGTGTCTTTATAGCAGCATGATTTATAGTCCTTTGGGTATATACCCAGTAATGGGATGGCTGGGTCAAATGGTATTTCTAGTTCTAGATCCCTGAGGAATCGCCACACTGACTTCCACAATGGTTGAACTAGTTTACAGTCCCACCAACAGTGTAAAAGTGTTCCTATTTCTCCGCATCCTCTCCAGCACCTGTTGTTTCCTGACTTTTTAATGATTGCCATTCTAACTGGTGTGAGATGATATCTCATAGTGGTTTTGATTTGCATTTCTCTGATGGCCAGTGATGATGAGCATTTCTTCATGTGTTTTTTGGCTGCATAAATGTCTTCTTTTGAGAAGT\tG\t.\tPASS\tAC=1868;AF=0.373003;AFR_AF=0.4365;AMR_AF=0.3703;AN=5008;CS=DEL_pindel;EAS_AF=0.3125;END=152341552;EUR_AF=0.4175;MEINFO=LINE1,5225,6019,-;NS=2504;SAS_AF=0.3057;SITEPOST=0.9996;SVTYPE=DEL_LINE1\tGT\t0|1\n4\t157002032\tDEL_pindel_13755\tTACCTATTTAGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTGTCGCCCAGGCTGGAGTGCAGTGGCGCAATCTCGGCTCACTGCAGGCTCCGCCCCCTGGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCTCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGC\tT\t.\tPASS\tAC=3686;AF=0.736022;AFR_AF=0.708;AMR_AF=0.7133;AN=5008;CS=DEL_pindel;EAS_AF=0.7629;END=157002343;EUR_AF=0.7296;MEINFO=AluYe,21,281,-;NS=2504;SAS_AF=0.7689;SITEPOST=0.9365;SVTYPE=DEL_ALU\tGT\t1|1\n4\t160670214\tDEL_pindel_13813\tCCTTCCCTTTCTCCTTTCCTCTTCCCTTTTTCCTTTCTTCTTCCCTTTTTCCTTTCCTCTTCCCTTTTTCCTTTCCTCTTCCCTTTTTCCTTTCCTCTTCCCTTTTTCCTTTCTT\tC\t.\tPASS\tAC=1685;AF=0.336462;AFR_AF=0.2163;AMR_AF=0.379;AN=5008;CS=DEL_pindel;EAS_AF=0.3601;END=160670328;EUR_AF=0.3579;NS=2504;SAS_AF=0.4223;SITEPOST=0.996;SVTYPE=DEL\tGT\t1|0\n4\t162053240\tUW_VH_1748\tG\t<CN0>\t100\tPASS\tAC=1953;AF=0.389976;AFR_AF=0.2579;AMR_AF=0.3991;AN=5008;CIEND=0,286;CIPOS=-272,0;CS=DEL_union;EAS_AF=0.4157;END=162053669;EUR_AF=0.4135;NS=2504;SAS_AF=0.5112;SVTYPE=DEL\tGT\t1|0\n4\t162053282\tBI_GS_DEL1_B1_P0856_34\tA\t<CN0>\t100\tPASS\tAC=1954;AF=0.390176;AFR_AF=0.2595;AMR_AF=0.3991;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.4157;END=162053551;EUR_AF=0.4135;NS=2504;SAS_AF=0.5102;SVTYPE=DEL\tGT\t1|0\n4\t162381498\tDEL_pindel_13844\tGTCATTTACATTAGGTGTATCTCCTAATGCTATCCCTCCCCCCTCCCCCCACCTCACAACAGGCCCGGGTGTGTGATGTTCCCCACCCCGTGTCCAAGTGTTCTCATTGTTCAATTCCCACCTATGAGTGAGGGATGAAGCTAGAAACCATCATCCTTAGAGAATTT\tG\t.\tPASS\tAC=1340;AF=0.267572;AFR_AF=0.0825;AMR_AF=0.3718;AN=5008;CS=DEL_pindel;EAS_AF=0.4345;END=162381664;EUR_AF=0.2326;NS=2504;SAS_AF=0.3078;SITEPOST=0.999;SVTYPE=DEL\tGT\t1|0\n4\t162449273\tUW_VH_16768\tA\t<CN0>\t100\tPASS\tAC=1201;AF=0.239816;AFR_AF=0.1127;AMR_AF=0.3199;AN=5008;CIEND=0,439;CIPOS=-257,0;CS=DEL_union;EAS_AF=0.3958;END=162451675;EUR_AF=0.1829;MC=BI_GS_DEL1_B2_P0856_268,UW_VH_434,UW_VH_13887,UW_VH_5088,YL_CN_BEB_902,YL_CN_CLM_910,YL_CN_CHB_1089,SI_BD_4937;NS=2504;SAS_AF=0.2526;SVTYPE=DEL\tGT\t1|1\n4\t162776133\tDEL_pindel_13854\tATTTTGAGGATATGGTTGAGAGGTTTTTTTTTTTTTTTTTTTTGCTTTCTAGCCTTGTTACTATTAAGTTCTATTAAG\tA\t.\tPASS\tAC=2224;AF=0.444089;AFR_AF=0.3888;AMR_AF=0.4741;AN=5008;CS=DEL_pindel;EAS_AF=0.4196;END=162776210;EUR_AF=0.4841;NS=2504;SAS_AF=0.4816;SITEPOST=0.98875;SVTYPE=DEL\tGT\t0|1\n4\t163394004\tBI_GS_DEL1_B1_P0857_291\tG\t<CN0>\t100\tPASS\tAC=1513;AF=0.302117;AFR_AF=0.1036;AMR_AF=0.4265;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.5278;END=163396424;EUR_AF=0.2396;MC=YL_CN_FIN_1019,EM_DL_DEL74739,SI_BD_4944,YL_CN_ACB_1227,UW_VH_1749;NS=2504;SAS_AF=0.3139;SVTYPE=DEL\tGT\t1|0\n4\t164501940\tDEL_pindel_13878\tAAGTATTAAAGTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGTCGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC\tA\t.\tPASS\tAC=2059;AF=0.411142;AFR_AF=0.4077;AMR_AF=0.4251;AN=5008;CS=DEL_pindel;EAS_AF=0.4683;END=164502253;EUR_AF=0.3787;MEINFO=AluYb6_2,1,281,-;NS=2504;SAS_AF=0.3804;SITEPOST=0.9976;SVTYPE=DEL_ALU\tGT\t1|0\n4\t166002564\tSI_BD_4967\tC\t<CN0>\t100\tPASS\tAC=4139;AF=0.826478;AFR_AF=0.5832;AMR_AF=0.8876;AN=5008;CIEND=-50,293;CIPOS=-293,87;CS=DEL_union;EAS_AF=0.9375;END=166005042;EUR_AF=0.9225;MC=UW_VH_1977,YL_CN_ESN_1134,UW_VH_11097,UW_VH_19288,UW_VH_5359,UW_VH_22057,UW_VH_3878,UW_VH_11179,UW_VH_4803,YL_CN_BEB_908,BI_GS_DEL1_B1_P0860_1,UW_VH_21013,UW_VH_18994,UW_VH_17478,EM_DL_DEL74800,UW_VH_24004,UW_VH_3300;NS=2504;SAS_AF=0.8988;SVTYPE=DEL\tGT\t1|1\n4\t167004317\tBI_GS_DEL1_B1_P0861_4\tG\t<CN0>\t100\tPASS\tAC=1915;AF=0.382388;AFR_AF=0.0719;AMR_AF=0.5288;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.4673;END=167004917;EUR_AF=0.4712;NS=2504;SAS_AF=0.5194;SVTYPE=DEL\tGT\t1|1\n4\t167669354\tSI_BD_4975\tG\t<CN0>\t100\tPASS\tAC=1042;AF=0.208067;AFR_AF=0.4516;AMR_AF=0.1326;AN=5008;CIEND=-57,206;CIPOS=-206,50;CS=DEL_union;EAS_AF=0.0506;END=167670581;EUR_AF=0.1829;MC=YL_CN_MSL_997,BI_GS_DEL1_B1_P0861_489,YL_CN_ESN_1136;NS=2504;SAS_AF=0.1207;SVTYPE=DEL\tGT\t0|1\n4\t168806478\tDEL_pindel_13956\tGCAGGTAGCTTTTGTATCTTTGTAGCTATCTTATTTAGGAATAGAATGGAAGGCAGGTTTGCCCCATGCAATTCCCAGCTTGACTTTTCCCTTTGGCTTAGTGATTTTGCAGT\tG\t.\tPASS\tAC=414;AF=0.0826677;AFR_AF=0.0393;AMR_AF=0.1009;AN=5008;CS=DEL_pindel;EAS_AF=0.0417;END=168806590;EUR_AF=0.172;NS=2504;SAS_AF=0.0787;SITEPOST=0.9988;SVTYPE=DEL\tGT\t0|1\n4\t170278462\tBI_GS_DEL1_B5_P0864_357\tT\t<CN0>\t100\tPASS\tAC=2484;AF=0.496006;AFR_AF=0.2133;AMR_AF=0.6686;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.75;END=170278879;EUR_AF=0.502;MC=UW_VH_440,DEL_pindel_13975;NS=2504;SAS_AF=0.4877;SVTYPE=DEL\tGT\t1|0\n4\t172374434\tSI_BD_5006\tC\t<CN0>\t100\tPASS\tAC=3316;AF=0.662141;AFR_AF=0.3472;AMR_AF=0.7853;AN=5008;CIEND=-75,312;CIPOS=-312,50;CS=DEL_union;EAS_AF=0.8651;END=172379470;EUR_AF=0.7495;MC=UW_VH_441,UW_VH_20350,UW_VH_4690,EM_DL_DEL75061,UW_VH_4655,YL_CN_LWK_1070;NS=2504;SAS_AF=0.7014;SVTYPE=DEL\tGT\t1|0\n4\t172988631\tUW_VH_25120\tA\t<CN0>\t100\tPASS\tAC=2048;AF=0.408946;AFR_AF=0.4849;AMR_AF=0.5072;AN=5008;CIEND=0,343;CIPOS=-339,0;CS=DEL_union;EAS_AF=0.2073;END=172992933;EUR_AF=0.505;MC=YL_CN_CDX_936,UW_VH_9065,UW_VH_442,UW_VH_17158,UW_VH_15800,BI_GS_DEL1_B1_P0866_761,EM_DL_DEL75073,UW_VH_4730,UW_VH_6522,UW_VH_20733,UW_VH_17716,UW_VH_18538,SI_BD_5015;NS=2504;SAS_AF=0.3456;SVTYPE=DEL\tGT\t0|1\n4\t173176433\tDEL_pindel_14001\tTTTCATTGACATTTATTTTTTAAATCACTGTGCTGAGAAGTAGACAGAAAAATCA\tT\t.\tPASS\tAC=1416;AF=0.282748;AFR_AF=0.2943;AMR_AF=0.3545;AN=5008;CS=DEL_pindel;EAS_AF=0.1528;END=173176487;EUR_AF=0.3748;NS=2504;SAS_AF=0.2556;SITEPOST=0.9999;SVTYPE=DEL\tGT\t0|1\n4\t173425034\tBI_GS_DEL1_B1_P0867_301\tA\t<CN0>\t100\tPASS\tAC=4143;AF=0.827276;AFR_AF=0.6271;AMR_AF=0.8804;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.9891;END=173433521;EUR_AF=0.8022;MC=EM_DL_DEL75082,UW_VH_24951,UW_VH_13779,UW_VH_3953,UW_VH_5240,UW_VH_5648,UW_VH_20909,YL_CN_YRI_1407,UW_VH_2658,SI_BD_5016;NS=2504;SAS_AF=0.9192;SVTYPE=DEL\tGT\t1|1\n4\t174044228\tALU_umary_ALU_3943\tT\t<INS:ME:ALU>\t.\t.\tAC=1240;AF=0.247604;AFR_AF=0.0605;AMR_AF=0.3934;AN=5008;CS=ALU_umary;EAS_AF=0.1855;EUR_AF=0.4006;MEINFO=AluUndef,2,281,-;NS=2504;SAS_AF=0.3037;SITEPOST=1;SVLEN=279;SVTYPE=ALU;TSD=TATTACTGCTTTTT\tGT\t0|1\n4\t174149455\tALU_umary_ALU_3944\tT\t<INS:ME:ALU>\t.\t.\tAC=1310;AF=0.261581;AFR_AF=0.1142;AMR_AF=0.1816;AN=5008;CS=ALU_umary;EAS_AF=0.4157;EUR_AF=0.3221;MEINFO=AluUndef,2,281,-;NS=2504;SAS_AF=0.2965;SITEPOST=1;SVLEN=279;SVTYPE=ALU;TSD=CTTCTAGTCATTTCT\tGT\t1|0\n4\t178156827\tDEL_pindel_14109\tTAAGTATTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGTCGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC\tT\t.\tPASS\tAC=4748;AF=0.948083;AFR_AF=0.9266;AMR_AF=0.938;AN=5008;CS=DEL_pindel;EAS_AF=0.9603;END=178157156;EUR_AF=0.9602;MEINFO=AluYb6_2,1,281,-;NS=2504;SAS_AF=0.9591;SITEPOST=1;SVTYPE=DEL_ALU\tGT\t1|1\n4\t180063822\tBI_GS_DEL1_B4_P0874_17\tC\t<CN0>\t100\tPASS\tAC=2658;AF=0.530751;AFR_AF=0.5613;AMR_AF=0.5476;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.7242;END=180064151;EUR_AF=0.2913;NS=2504;SAS_AF=0.5245;SVTYPE=DEL\tGT\t0|1\n4\t180097876\tDEL_pindel_14142\tAATTATTGTTAACTTTTGTCACCCTACTGTGCTGTTGAACACTTTTCTAACTGTATTTTTGGACCCATTAAACAATTCTCTTTATTACTCCTCCTTCCTATTCTTTGCAACTGCTGGTAACCATCATTATACTCTCTACCTTCGTGAGATAATTTTTTTTTAATTCCCACATATGAATGAGAACATGCGATATTCATCTTTCAATGCCTGGCTTATTTCATTTACATAATGCCCACCAGTTCTATGTTGCTACAAATAACAGCATTTCTGTCTTTTCTACGGCTGAATAATATTTCATTTTATATATATAAAAAAAAAATTTCTTTATTCATTCAACTGTTGATGAACACAAGCGGCTTCCACATCTTGGCTATTATAAATAGTGCTGTAATAAACATGGAAGTACAGATGTCTCTCTAATATACTGATTTCCTTTCTTTTGGATATATACCCAGCAGTTAGACTGTTGAATTTTATGGTGATTAATTTTTTTTAATTTTTGAGGAAGCTTCATGCTATTTTCCATTGTGGTGTACTAATTTACAATCCCACCAATGACATATGAGCATTCTTTTTTCTCTTCATTCTTGCCAACATTTCTTATTTTCTGTTGTTTTGATAATAGCTATTCT\tA\t.\tPASS\tAC=939;AF=0.1875;AFR_AF=0.1967;AMR_AF=0.1758;AN=5008;CS=DEL_pindel;EAS_AF=0.1448;END=180098507;EUR_AF=0.2286;NS=2504;SAS_AF=0.1851;SITEPOST=0.9994;SVTYPE=DEL\tGT\t0|1\n4\t180256972\tALU_umary_ALU_3976\tT\t<INS:ME:ALU>\t.\t.\tAC=2137;AF=0.426717;AFR_AF=0.4697;AMR_AF=0.3098;AN=5008;CS=ALU_umary;EAS_AF=0.3353;EUR_AF=0.5388;MEINFO=AluUndef,1,281,-;NS=2504;SAS_AF=0.4305;SITEPOST=1;SVLEN=280;SVTYPE=ALU;TSD=TAAATCAAATTTCTTATT\tGT\t1|1\n4\t180600174\tDEL_pindel_14147\tAGTGTATATATATGTACACACATATATATGTGTATATATATGTACACACATATATATGTGTATATATATGTACACACATATATGT\tA\t.\tPASS\tAC=1503;AF=0.30012;AFR_AF=0.267;AMR_AF=0.3184;AN=5008;CS=DEL_pindel;EAS_AF=0.2857;END=180600258;EUR_AF=0.3221;NS=2504;SAS_AF=0.3241;SITEPOST=0.9861;SVTYPE=DEL\tGT\t1|0\n4\t181317271\tDEL_pindel_14173\tAACAGGCTGTCCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGCGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGTGCCCGCTACC\tA\t.\tPASS\tAC=3266;AF=0.652157;AFR_AF=0.5825;AMR_AF=0.7133;AN=5008;CS=DEL_pindel;EAS_AF=0.6409;END=181317454;EUR_AF=0.6819;MEINFO=AluYc,145,281,-;NS=2504;SAS_AF=0.684;SITEPOST=0.9617;SVTYPE=DEL_ALU\tGT\t1|0\n4\t181503039\tALU_umary_ALU_3981\tT\t<INS:ME:ALU>\t.\t.\tAC=394;AF=0.0786741;AFR_AF=0.0045;AMR_AF=0.0937;AN=5008;CS=ALU_umary;EAS_AF=0.001;EUR_AF=0.2187;MEINFO=AluYa5a2,2,281,-;NS=2504;SAS_AF=0.1043;SITEPOST=1;SVLEN=279;SVTYPE=ALU;TSD=AATGCTTATTTTT\tGT\t0|1\n4\t181549428\tDEL_pindel_14182\tTCTGTGTCTTCTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC\tT\t.\tPASS\tAC=2874;AF=0.573882;AFR_AF=0.5938;AMR_AF=0.5879;AN=5008;CS=DEL_pindel;EAS_AF=0.4296;END=181549742;EUR_AF=0.6203;MEINFO=AluYa5,1,281,-;NS=2504;SAS_AF=0.638;SITEPOST=0.9948;SVTYPE=DEL_ALU\tGT\t1|1\n4\t182056564\tBI_GS_DEL1_B3_P0876_6\tT\t<CN0>\t100\tPASS\tAC=2404;AF=0.480032;AFR_AF=0.1936;AMR_AF=0.5677;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.751;END=182057129;EUR_AF=0.5676;MC=SI_BD_5073;NS=2504;SAS_AF=0.4356;SVTYPE=DEL\tGT\t1|0\n4\t183570005\tUW_VH_4307\tT\t<CN0>\t100\tPASS\tAC=411;AF=0.0820687;AFR_AF=0.0061;AMR_AF=0.0663;AN=5008;CIEND=0,153;CIPOS=-41,0;CS=DEL_union;EAS_AF=0.1339;END=183571998;EUR_AF=0.0755;MC=YL_CN_CEU_1372,BI_GS_DEL1_B4_P0877_133,EM_DL_DEL10827429;NS=2504;SAS_AF=0.1493;SVTYPE=DEL\tGT\t0|1\n4\t184303686\tDEL_pindel_14250\tTAACATAGCACTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACAGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC\tT\t.\tPASS\tAC=3514;AF=0.701677;AFR_AF=0.6278;AMR_AF=0.7233;AN=5008;CS=DEL_pindel;EAS_AF=0.7232;END=184304009;EUR_AF=0.7386;MEINFO=AluYa5,1,281,-;NS=2504;SAS_AF=0.726;SITEPOST=0.95575;SVTYPE=DEL_ALU\tGT\t0|1\n4\t185665771\tDEL_pindel_14281\tTCTAAAACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGCGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCTACCACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCTGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGC\tT\t.\tPASS\tAC=3541;AF=0.707069;AFR_AF=0.7005;AMR_AF=0.7118;AN=5008;CS=DEL_pindel;EAS_AF=0.7192;END=185666089;EUR_AF=0.7107;MEINFO=AluYc1,2,281,-;NS=2504;SAS_AF=0.6963;SITEPOST=0.935;SVTYPE=DEL_ALU\tGT\t0|1\n4\t185977809\tALU_umary_ALU_3999\tT\t<INS:ME:ALU>\t.\t.\tAC=1732;AF=0.345847;AFR_AF=0.4675;AMR_AF=0.2997;AN=5008;CS=ALU_umary;EAS_AF=0.4087;EUR_AF=0.2445;MEINFO=AluUndef,4,281,-;NS=2504;SAS_AF=0.2536;SITEPOST=1;SVLEN=277;SVTYPE=ALU;TSD=CTGAATTTT\tGT\t0|1\n4\t186382160\tALU_umary_ALU_4001\tT\t<INS:ME:ALU>\t.\t.\tAC=1537;AF=0.306909;AFR_AF=0.2254;AMR_AF=0.2925;AN=5008;CS=ALU_umary;EAS_AF=0.2391;EUR_AF=0.4254;MEINFO=AluUndef,15,268,-;NS=2504;SAS_AF=0.3753;SITEPOST=1;SVLEN=253;SVTYPE=ALU;TSD=GGTAGTCACGTTTT\tGT\t0|1\n4\t186441632\tBI_GS_DEL1_B2_P0880_294\tT\t<CN0>\t100\tPASS\tAC=3178;AF=0.634585;AFR_AF=0.1906;AMR_AF=0.7839;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.8105;END=186444075;EUR_AF=0.8439;MC=UW_VH_6680,UW_VH_452,UW_VH_4848,SI_BD_5108,YL_CN_LWK_1085,EM_DL_DEL75360,UW_VH_24773,UW_VH_6455,UW_VH_4987,UW_VH_13738;NS=2504;SAS_AF=0.7321;SVTYPE=DEL\tGT\t0|1\n4\t187093487\tALU_umary_ALU_4005\tC\t<INS:ME:ALU>\t.\t.\tAC=1443;AF=0.288139;AFR_AF=0.1868;AMR_AF=0.3386;AN=5008;CS=ALU_umary;EAS_AF=0.2341;EUR_AF=0.4612;MEINFO=AluUndef,1,281,-;NS=2504;SAS_AF=0.2669;SITEPOST=1;SVLEN=280;SVTYPE=ALU;TSD=null\tGT\t0|1\n4\t187093487\tUW_VH_3645\tC\t<CN0>\t100\tPASS\tAC=1930;AF=0.385383;AFR_AF=0.2564;AMR_AF=0.451;AN=5008;CIEND=0,166;CIPOS=-156,0;CS=DEL_union;EAS_AF=0.2956;END=187098252;EUR_AF=0.6014;MC=YL_CN_CDX_950,YL_CN_GBR_1048,EM_DL_DEL75377,BI_GS_DEL1_B1_P0881_74;NS=2504;SAS_AF=0.3834;SVTYPE=DEL\tGT\t1|1\n4\t187795697\tDEL_pindel_14332\tGCAACAAATTATCTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTGGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGC\tG\t.\tPASS\tAC=3479;AF=0.694688;AFR_AF=0.6861;AMR_AF=0.6844;AN=5008;CS=DEL_pindel;EAS_AF=0.7113;END=187796017;EUR_AF=0.6928;MEINFO=AluYa4_4,2,281,-;NS=2504;SAS_AF=0.6984;SITEPOST=0.9614;SVTYPE=DEL_ALU\tGT\t1|1\n4\t188200037\tALU_umary_ALU_4010\tC\t<INS:ME:ALU>\t.\t.\tAC=556;AF=0.111022;AFR_AF=0.1354;AMR_AF=0.1037;AN=5008;CS=ALU_umary;EAS_AF=0.1518;EUR_AF=0.0974;MEINFO=AluYa5,2,254,+;NS=2504;SAS_AF=0.0552;SITEPOST=1;SVLEN=252;SVTYPE=ALU;TSD=AAAAAATCGC\tGT\t0|1\n4\t188959366\tDEL_pindel_14367\tATCAAATTGCCTTTTTGTTTTGCTAATATTTAATACTCATGATAAAAAGATTTTAGACTGTAGCAGGTTTTTCTTTTTAACCCTGGTTATATTATTTGGCATGATTCAGATGTTGAAGTAGCC\tA\t.\tPASS\tAC=1605;AF=0.320487;AFR_AF=0.2141;AMR_AF=0.4481;AN=5008;CS=DEL_pindel;EAS_AF=0.1329;END=188959488;EUR_AF=0.5825;NS=2504;SAS_AF=0.2975;SITEPOST=0.9946;SVTYPE=DEL\tGT\t0|1\n4\t189793239\tDEL_pindel_14388\tTGAAAGTACTGGATTAGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAATTAGCCGGGCGCAGTGACAGGCGCCTGTGGTCCCAGCTACTCGGGTCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTCGCAGTGAGCCGAGATCGCGCCCCTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAGAAAAAAAAAAA\tT\t.\tPASS\tAC=2163;AF=0.431909;AFR_AF=0.379;AMR_AF=0.5144;AN=5008;CS=DEL_pindel;EAS_AF=0.254;END=189793558;EUR_AF=0.5736;MEINFO=AluYa3_1,1,281,+;NS=2504;SAS_AF=0.4826;SITEPOST=0.9991;SVTYPE=DEL_ALU\tGT\t1|1\n4\t189969676\tDEL_pindel_14391\tTGAGCATGCTAGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTTGCTCTGTCGCCCAGGCCGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCCCGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC\tT\t.\tPASS\tAC=3293;AF=0.657548;AFR_AF=0.6581;AMR_AF=0.6599;AN=5008;CS=DEL_pindel;EAS_AF=0.6448;END=189970030;EUR_AF=0.671;MEINFO=AluYb5,1,281,-;NS=2504;SAS_AF=0.6544;SITEPOST=0.96125;SVTYPE=DEL_ALU\tGT\t0|1\n4\t190058006\tBI_GS_DEL1_B1_P0884_52\tA\t<CN0>\t100\tPASS\tAC=2955;AF=0.590056;AFR_AF=0.4592;AMR_AF=0.621;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.6488;END=190064283;EUR_AF=0.7078;MC=SI_BD_5163,UW_VH_2786;MEINFO=LINE1,341,389,+;NS=2504;SAS_AF=0.5634;SVTYPE=DEL_LINE1\tGT\t1|1\n4\t190105408\tEM_DL_DEL10831050\tC\t<CN0>\t100\tPASS\tAC=4633;AF=0.92512;AFR_AF=0.8608;AMR_AF=0.9467;AN=5008;CIEND=-150,150;CIPOS=-150,150;CS=DEL_union;EAS_AF=0.994;END=190106160;EUR_AF=0.9245;NS=2504;SAS_AF=0.9264;SVTYPE=DEL\tGT\t1|1\n4\t190253838\tDEL_pindel_14394\tTGAACAGATACTTCTCTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGTCGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC\tT\t.\tPASS\tAC=3854;AF=0.769569;AFR_AF=0.7489;AMR_AF=0.7781;AN=5008;CS=DEL_pindel;EAS_AF=0.8026;END=190254160;EUR_AF=0.7763;MEINFO=AluYb6_2,1,281,-;NS=2504;SAS_AF=0.7505;SITEPOST=0.96465;SVTYPE=DEL_ALU\tGT\t1|1\n4\t190291418\tDEL_pindel_14395\tTCGGAGTCATTTTCTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCTGTGGCGCGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCATGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCGCGCCACCACACCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTGTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC\tT\t.\tPASS\tAC=3405;AF=0.679912;AFR_AF=0.5923;AMR_AF=0.634;AN=5008;CS=DEL_pindel;EAS_AF=0.7917;END=190291737;EUR_AF=0.672;MEINFO=AluY,1,281,-;NS=2504;SAS_AF=0.7239;SITEPOST=0.9904;SVTYPE=DEL_ALU\tGT\t0|1\n4\t190302417\tBI_GS_DEL1_B4_P0884_66\tA\t<CN0>\t100\tPASS\tAC=4246;AF=0.847843;AFR_AF=0.6664;AMR_AF=0.8357;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.9692;END=190302714;EUR_AF=0.8926;MC=BI_GS_DEL1_B5_P0884_316;NS=2504;SAS_AF=0.9305;SVTYPE=DEL\tGT\t1|1\n5\t167619\tALU_umary_ALU_4026\tG\t<INS:ME:ALU>\t.\t.\tAC=212;AF=0.0423323;AFR_AF=0.0076;AMR_AF=0.0605;AN=5008;CS=ALU_umary;EAS_AF=0.002;EUR_AF=0.1103;MEINFO=AluYc1,1,281,+;NS=2504;SAS_AF=0.0481;SITEPOST=1;SVLEN=280;SVTYPE=ALU;TSD=AAGGAGGTTGGGGG\tGT\t0|1\n5\t608881\tDEL_pindel_14434\tTGTGGGAGCGTGCGCTGGGATGGGGAGGGGTCACTGTGAGCACGGTGCGTC\tT\t.\tPASS\tAC=1691;AF=0.33766;AFR_AF=0.3313;AMR_AF=0.3617;AN=5008;CS=DEL_pindel;EAS_AF=0.2361;END=608931;EUR_AF=0.4016;NS=2504;SAS_AF=0.3681;SITEPOST=0.9888;SVTYPE=DEL\tGT\t0|1\n5\t1022803\tYL_CN_ESN_1200\tC\t<CN0>\t100\tPASS\tAC=4515;AF=0.901558;AFR_AF=0.6498;AMR_AF=0.9669;AN=5008;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0.997;END=1025877;EUR_AF=0.997;NS=2504;SAS_AF=0.999;SVTYPE=DEL\tGT\t1|1\n5\t1585517\tALU_umary_ALU_4031\tA\t<INS:ME:ALU>\t.\t.\tAC=1360;AF=0.271565;AFR_AF=0.1989;AMR_AF=0.2997;AN=5008;CS=ALU_umary;EAS_AF=0.2351;EUR_AF=0.3469;MEINFO=AluYc1,1,279,+;NS=2504;SAS_AF=0.3098;SITEPOST=1;SVLEN=278;SVTYPE=ALU;TSD=AAGAGACCCTCTCTA\tGT\t0|1\n5\t1627140\tBI_GS_DEL1_B5_P0887_523\tA\t<CN0>\t100\tPASS\tAC=1150;AF=0.229633;AFR_AF=0.3858;AMR_AF=0.1772;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.1369;END=1628837;EUR_AF=0.2376;NS=2504;SAS_AF=0.1431;SVTYPE=DEL\tGT\t0|1\n5\t1812652\tALU_umary_ALU_4032\tT\t<INS:ME:ALU>\t.\t.\tAC=1406;AF=0.280751;AFR_AF=0.177;AMR_AF=0.3775;AN=5008;CS=ALU_umary;EAS_AF=0.1885;EUR_AF=0.3847;MEINFO=AluYa5,1,281,-;NS=2504;SAS_AF=0.3405;SITEPOST=1;SVLEN=280;SVTYPE=ALU;TSD=GACTCCTCTTTT\tGT\t1|0\n5\t1924587\tBI_GS_DEL1_B3_P0887_48\tG\t<CN0>\t100\tPASS\tAC=3647;AF=0.728235;AFR_AF=0.8442;AMR_AF=0.7017;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.5794;END=1925201;EUR_AF=0.8121;NS=2504;SAS_AF=0.6575;SVTYPE=DEL\tGT\t1|0\n5\t3995199\tALU_umary_ALU_4040\tC\t<INS:ME:ALU>\t.\t.\tAC=2275;AF=0.454273;AFR_AF=0.3699;AMR_AF=0.4337;AN=5008;CS=ALU_umary;EAS_AF=0.5536;EUR_AF=0.4831;MEINFO=AluYa5,1,281,+;NS=2504;SAS_AF=0.4509;SITEPOST=1;SVLEN=280;SVTYPE=ALU;TSD=AGAAAACGACAGAAATC\tGT\t1|0\n5\t4459411\tDEL_pindel_14539\tTATCATATGTATATGATATATATACATACATATATATCATATGTATATGATATATATACATACATATATATC\tT\t.\tPASS\tAC=4235;AF=0.845647;AFR_AF=0.5008;AMR_AF=0.9481;AN=5008;CS=DEL_pindel;EAS_AF=0.9782;END=4459482;EUR_AF=0.9771;NS=2504;SAS_AF=0.9673;SITEPOST=0.9999;SVTYPE=DEL\tGT\t1|1\n5\t5595248\tALU_umary_ALU_4048\tT\t<INS:ME:ALU>\t.\t.\tAC=2594;AF=0.517971;AFR_AF=0.5575;AMR_AF=0.4899;AN=5008;CS=ALU_umary;EAS_AF=0.4851;EUR_AF=0.5159;MEINFO=AluUndef,1,274,-;NS=2504;SAS_AF=0.5204;SITEPOST=1;SVLEN=273;SVTYPE=ALU;TSD=GACTTTTT\tGT\t1|0\n5\t7221928\tDEL_pindel_14582\tTCCATATGCAGTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCCGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGTGCCCAGCC\tT\t.\tPASS\tAC=2952;AF=0.589457;AFR_AF=0.6755;AMR_AF=0.5821;AN=5008;CS=DEL_pindel;EAS_AF=0.5347;END=7222248;EUR_AF=0.5278;MEINFO=AluYb6_2,1,281,-;NS=2504;SAS_AF=0.5982;SITEPOST=0.9793;SVTYPE=DEL_ALU\tGT\t1|0\n5\t8749528\tL1_umary_LINE1_1049\tG\t<INS:ME:LINE1>\t.\t.\tAC=1853;AF=0.370008;AFR_AF=0.1112;AMR_AF=0.4942;AN=5008;CS=L1_umary;EAS_AF=0.5387;EUR_AF=0.4264;MEINFO=LINE1,4274,5992,+;NS=2504;SAS_AF=0.3998;SITEPOST=1;SVLEN=1718;SVTYPE=LINE1;TSD=AAAATTTTTTAATG\tGT\t1|1\n5\t9411760\tDEL_pindel_14628\tTAAAAATTAATCTTGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAA\tT\t.\tPASS\tAC=3390;AF=0.676917;AFR_AF=0.6543;AMR_AF=0.6744;AN=5008;CS=DEL_pindel;EAS_AF=0.6915;END=9412074;EUR_AF=0.6948;MEINFO=AluYa5,1,281,+;NS=2504;SAS_AF=0.6759;SITEPOST=0.9601;SVTYPE=DEL_ALU\tGT\t0|1\n5\t10273288\tEM_DL_DEL75971\tT\t<CN0>\t100\tPASS\tAC=1995;AF=0.398363;AFR_AF=0.3767;AMR_AF=0.4611;AN=5008;CIEND=-150,150;CIPOS=-150,150;CS=DEL_union;EAS_AF=0.0774;END=10275414;EUR_AF=0.6948;MC=YL_CN_PUR_1377,YL_CN_CEU_1455,UW_VH_19702,YL_CN_GBR_1108;NS=2504;SAS_AF=0.409;SVTYPE=DEL\tGT\t1|0\n5\t10574959\tBI_GS_DEL1_B4_P0896_114\tA\t<CN0>\t100\tPASS\tAC=3815;AF=0.761781;AFR_AF=0.4697;AMR_AF=0.8746;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.8948;END=10575294;EUR_AF=0.8608;NS=2504;SAS_AF=0.8374;SVTYPE=DEL\tGT\t1|1\n5\t10756185\tBI_GS_DEL1_B1_P0896_726\tA\t<CN0>\t100\tPASS\tAC=1179;AF=0.235423;AFR_AF=0.2958;AMR_AF=0.1744;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.2361;END=10756522;EUR_AF=0.2107;MC=DEL_pindel_14671,UW_VH_461;NS=2504;SAS_AF=0.2219;SVTYPE=DEL\tGT\t1|0\n5\t13399958\tDEL_pindel_14735\tGATGCCTCTTTGGATCACCACTGATTTTCAGGGTCAGTGCTGTCATCTTTGCTTTAGCCACCATCTAACTGAGCC\tG\t.\tPASS\tAC=823;AF=0.164337;AFR_AF=0.2088;AMR_AF=0.1585;AN=5008;CS=DEL_pindel;EAS_AF=0.124;END=13400032;EUR_AF=0.171;NS=2504;SAS_AF=0.1431;SITEPOST=0.99995;SVTYPE=DEL\tGT\t1|1\n5\t16525366\tDEL_pindel_14795\tGGCCCCAACAGGTGGATGTGCGCGGGGGGACACTGTGCTGATTTGCGTCCTCCA\tG\t.\tPASS\tAC=1051;AF=0.209864;AFR_AF=0.1876;AMR_AF=0.0893;AN=5008;CS=DEL_pindel;EAS_AF=0.2847;END=16525419;EUR_AF=0.1869;NS=2504;SAS_AF=0.272;SITEPOST=0.9987;SVTYPE=DEL\tGT\t1|0\n5\t17712622\tALU_umary_ALU_4115\tG\t<INS:ME:ALU>\t.\t.\tAC=1830;AF=0.365415;AFR_AF=0.2413;AMR_AF=0.3458;AN=5008;CS=ALU_umary;EAS_AF=0.3224;EUR_AF=0.5239;MEINFO=AluYa5,14,281,+;NS=2504;SAS_AF=0.4284;SITEPOST=1;SVLEN=267;SVTYPE=ALU;TSD=AGAAAAATATACACAAG\tGT\t1|0\n5\t18643248\tUW_VH_4714\tT\t<CN0>\t100\tPASS\tAC=9;AF=0.00179712;AFR_AF=0.0008;AMR_AF=0.0014;AN=5008;CIEND=0,100;CIPOS=-87,0;CS=DEL_union;EAS_AF=0;END=18648493;EUR_AF=0.007;MC=BI_GS_DEL1_B1_P0904_513,SI_BD_5384;NS=2504;SAS_AF=0;SVTYPE=DEL\tGT\t1|0\n5\t21651568\tDEL_pindel_14912\tAAAAATAATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCTGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCTCCACCACGCCTGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCCG\tA\t.\tPASS\tAC=1585;AF=0.316494;AFR_AF=0.5522;AMR_AF=0.1585;AN=5008;CS=DEL_pindel;EAS_AF=0.3462;END=21651891;EUR_AF=0.1879;MEINFO=AluYa4_3,1,281,-;NS=2504;SAS_AF=0.2117;SITEPOST=0.99405;SVTYPE=DEL_ALU\tGT\t1|1\n5\t23903003\tBI_GS_DEL1_B4_P0909_180\tC\t<CN0>\t100\tPASS\tAC=1907;AF=0.380791;AFR_AF=0.348;AMR_AF=0.4006;AN=5008;CIEND=-5,5;CIPOS=-5,5;CS=DEL_union;EAS_AF=0.2986;END=23905242;EUR_AF=0.496;MC=YL_CN_FIN_1129,EM_DL_DEL76319,YL_CN_ASW_1247;NS=2504;SAS_AF=0.3773;SVTYPE=DEL\tGT\t0|1\n5\t24452839\tDEL_pindel_14973\tTAAGAAAACAATAGGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGCGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCCGACCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAA\tT\t.\tPASS\tAC=3026;AF=0.604233;AFR_AF=0.6286;AMR_AF=0.6686;AN=5008;CS=DEL_pindel;EAS_AF=0.4256;END=24453161;EUR_AF=0.6938;MEINFO=AluYb6_2,1,281,+;NS=2504;SAS_AF=0.6176;SITEPOST=0.9735;SVTYPE=DEL_ALU\tGT\t0|1\n5\t25653044\tDEL_pindel_14997\tGGAATTTACTCATTTCATCTAGATTTTCTAGTTTATTTGCATAGAGGTATTTATGGTGTTCTCTGATGGTAGTTTGAATTTCTATGGGATCAGTGGTAATATCCCCTTCATCATTTTTTATTATATCTATTTGATTCTTCTCTCTTCTTTATTGGTCTTGCTAGTGATCTATCAATTTTGTTGATCTTTTCAAAAAACCAGCTCCTGGATTCATTGATTCTTT\tG\t.\tPASS\tAC=103;AF=0.0205671;AFR_AF=0.0008;AMR_AF=0.0216;AN=5008;CS=DEL_pindel;EAS_AF=0.002;END=25653266;EUR_AF=0.0318;NS=2504;SAS_AF=0.0542;SITEPOST=0.987;SVTYPE=DEL\tGT\t0|1\n5\t25777306\tDEL_pindel_15003\tTTTTTCCCAGAACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGCGATCTCGGCTCACTGCAAGCTCCGCCTCCCAGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCTACCACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC\tT\t.\tPASS\tAC=4131;AF=0.82488;AFR_AF=0.7958;AMR_AF=0.8329;AN=5008;CS=DEL_pindel;EAS_AF=0.8294;END=25777630;EUR_AF=0.8499;MEINFO=AluYc1,1,281,-;NS=2504;SAS_AF=0.8282;SITEPOST=0.9612;SVTYPE=DEL_ALU\tGT\t0|1\n5\t26111186\tDEL_pindel_15012\tTAAAACAATACATTACTGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCAGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGTCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAA\tT\t.\tPASS\tAC=3482;AF=0.695288;AFR_AF=0.7012;AMR_AF=0.6744;AN=5008;CS=DEL_pindel;EAS_AF=0.7163;END=26111512;EUR_AF=0.6998;MEINFO=AluYa4_4,1,281,+;NS=2504;SAS_AF=0.6759;SITEPOST=0.9548;SVTYPE=DEL_ALU\tGT\t1|1\n5\t31677424\tDEL_pindel_15115\tTAAAAAGGAGGTATATCCGGCCGGGCGCAGTGGCTCACGCCTGTAATCCCGGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAGCACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTGGTGGCGGGCGCCTGTGGTCCCAGCTGCTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCCGGAGGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTTAAAAAAAAAAAAAAAAAAAAAAA\tT\t.\tPASS\tAC=3607;AF=0.720248;AFR_AF=0.6558;AMR_AF=0.7334;AN=5008;CS=DEL_pindel;EAS_AF=0.7321;END=31677745;EUR_AF=0.7644;MEINFO=AluY,1,280,+;NS=2504;SAS_AF=0.7403;SITEPOST=0.96925;SVTYPE=DEL_ALU\tGT\t1|0\n5\t32338582\tNUMT_umich_142\tG\t<INS:MT>\t178\tPASS\tAC=2052;AF=0.409744;AFR_AF=0.3222;AMR_AF=0.451;AN=5008;CIEND=-3,0;CIPOS=0,3;CS=NUMT_umich;EAS_AF=0.4256;END=32338584;EUR_AF=0.4384;MEND=14988;MLEN=2275;MSTART=12714;NS=2504;SAS_AF=0.453;SVTYPE=INS\tGT\t0|1\n5\t32762578\tALU_umary_ALU_4195\tT\t<INS:ME:ALU>\t.\t.\tAC=926;AF=0.184904;AFR_AF=0.0234;AMR_AF=0.1787;AN=5008;CS=ALU_umary;EAS_AF=0.3542;EUR_AF=0.2416;MEINFO=AluUndef,1,255,-;NS=2504;SAS_AF=0.1748;SITEPOST=1;SVLEN=254;SVTYPE=ALU;TSD=TGTTTCCTGATTTTTT\tGT\t0|1\n5\t33355563\tDEL_pindel_15154\tTTTAACACATTTTTTTTCTTTTTCTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCCGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC\tT\t.\tPASS\tAC=2402;AF=0.479633;AFR_AF=0.5333;AMR_AF=0.4236;AN=5008;CS=DEL_pindel;EAS_AF=0.255;END=33355894;EUR_AF=0.6233;MEINFO=AluYb5,1,281,-;NS=2504;SAS_AF=0.5307;SITEPOST=0.9968;SVTYPE=DEL_ALU\tGT\t1|0\n5\t33633348\tL1_umary_LINE1_1089\tT\t<INS:ME:LINE1>\t.\t.\tAC=2939;AF=0.586861;AFR_AF=0.4312;AMR_AF=0.6744;AN=5008;CS=L1_umary;EAS_AF=0.623;EUR_AF=0.7276;MEINFO=LINE1,5262,6001,-;NS=2504;SAS_AF=0.5532;SITEPOST=1;SVLEN=739;SVTYPE=LINE1;TSD=GAAAAGTCTTCTTT\tGT\t0|1\n5\t34113270\tALU_umary_ALU_4205\tG\t<INS:ME:ALU>\t.\t.\tAC=1487;AF=0.296925;AFR_AF=0.1407;AMR_AF=0.3559;AN=5008;CS=ALU_umary;EAS_AF=0.2887;EUR_AF=0.4006;MEINFO=AluUndef,1,281,+;NS=2504;SAS_AF=0.3681;SITEPOST=1;SVLEN=280;SVTYPE=ALU;TSD=AAAATATTTAAAGTTTCTG\tGT\t0|1\n5\t35196137\tDEL_pindel_15194\tTAAATAAAATAAAATAAAATAAAATAAAATAAAATAAAATAAAATAAAATA\tT\t.\tPASS\tAC=2321;AF=0.463458;AFR_AF=0.5068;AMR_AF=0.4582;AN=5008;CS=DEL_pindel;EAS_AF=0.3294;END=35196187;EUR_AF=0.5239;NS=2504;SAS_AF=0.4847;SITEPOST=0.994;SVTYPE=DEL\tGT\t1|0\n5\t35614173\tDEL_pindel_15207\tTAAAAAATTGAGGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTGGTAGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCGCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAA\tT\t.\tPASS\tAC=1899;AF=0.379193;AFR_AF=0.3933;AMR_AF=0.3804;AN=5008;CS=DEL_pindel;EAS_AF=0.4425;END=35614486;EUR_AF=0.2048;MEINFO=AluYc1,1,281,+;NS=2504;SAS_AF=0.4734;SITEPOST=0.9997;SVTYPE=DEL_ALU\tGT\t0|1\n5\t35672335\tDEL_pindel_15210\tGTTCATTATAATGTTATTGAACATAATGTTCATTATAATGTTATTGAACATTATATATAA\tG\t.\tPASS\tAC=1925;AF=0.384385;AFR_AF=0.4002;AMR_AF=0.3862;AN=5008;CS=DEL_pindel;EAS_AF=0.371;END=35672394;EUR_AF=0.3757;NS=2504;SAS_AF=0.3845;SITEPOST=0.9962;SVTYPE=DEL\tGT\t1|0\n5\t37293799\tDEL_pindel_15233\tTTAAAGCAAATGATGATTCTTGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGCGGTGGCGGGCGCCTGTAGTCCCAGCTACTGGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCCGGCCTGGGCAACAGAGCGAGACGCCGTCTCAAAAAAAAAAAAAAAAAAAAAAA\tT\t.\tPASS\tAC=1293;AF=0.258187;AFR_AF=0.531;AMR_AF=0.2032;AN=5008;CS=DEL_pindel;EAS_AF=0.1171;END=37294130;EUR_AF=0.1392;MEINFO=AluYb6_2,1,281,+;NS=2504;SAS_AF=0.1963;SITEPOST=0.99865;SVTYPE=DEL_ALU\tGT\t0|1\n5\t40181658\tALU_umary_ALU_4230\tT\t<INS:ME:ALU>\t.\t.\tAC=2163;AF=0.431909;AFR_AF=0.354;AMR_AF=0.4294;AN=5008;CS=ALU_umary;EAS_AF=0.255;EUR_AF=0.5706;MEINFO=AluUndef,1,281,-;NS=2504;SAS_AF=0.5787;SITEPOST=1;SVLEN=280;SVTYPE=ALU;TSD=AACACTTTT\tGT\t1|1\n5\t42628418\tSI_BD_5524\tG\t<CN0>\t100\tPASS\tAC=1544;AF=0.308307;AFR_AF=0.4539;AMR_AF=0.2594;AN=5008;CIEND=-50,226;CIPOS=-226,50;CS=DEL_union;EAS_AF=0.2034;END=42631130;EUR_AF=0.3052;MC=YL_CN_GBR_1142,UW_VH_2553,UW_VH_4534,YL_CN_KHV_1228,BI_GS_DEL1_B1_P0928_583;NS=2504;SAS_AF=0.2577;SVTYPE=DEL\tGT\t1|0\n5\t43516480\tDEL_pindel_15335\tACCGGAAAAAGGAAGAAAGCCTCAGATGGGCATGTGTATAAATCCATAAAATCACTGTGTGTGCTCACTT\tA\t.\tPASS\tAC=2271;AF=0.453474;AFR_AF=0.0946;AMR_AF=0.5634;AN=5008;CS=DEL_pindel;EAS_AF=0.753;END=43516549;EUR_AF=0.4215;NS=2504;SAS_AF=0.5849;SITEPOST=0.9993;SVTYPE=DEL\tGT\t1|1\n5\t44125522\tDEL_pindel_15348\tAGACAAGGATGCTCACTCTCATTACTTCTATTCAACATAGTACTGAAAGTCCTAGCCAGAGCAATCAGACAAGAGAAAGTAATAAAGGACATCCAAATTGATAAAGAGGAAGTCAAACTGTCACTGCTTGCTGATGATATTATTGTTTACATAGAAAACACTAAAGACTCCTCCAGAAAGCTTCTAGAACT\tA\t.\tPASS\tAC=481;AF=0.0960463;AFR_AF=0.0696;AMR_AF=0.1614;AN=5008;CS=DEL_pindel;EAS_AF=0.1885;END=44125712;EUR_AF=0.0795;NS=2504;SAS_AF=0.0072;SITEPOST=0.9986;SVTYPE=DEL\tGT\t0|1\n5\t46144216\tBI_GS_DEL1_B1_P0932_46\tC\t<CN0>\t100\tPASS\tAC=1814;AF=0.36222;AFR_AF=0.351;AMR_AF=0.2997;AN=5008;CIEND=-1,1;CIPOS=-1,1;CS=DEL_union;EAS_AF=0.4692;END=46145986;EUR_AF=0.3191;MC=YL_CN_CHB_1221,YL_CN_KHV_1237,YL_CN_CHS_1215,YL_CN_STU_1185,YL_CN_GBR_1147,YL_CN_BEB_1044;NS=2504;SAS_AF=0.3558;SVTYPE=DEL\tGT\t1|0\n5\t49480966\tBI_GS_DEL1_B3_P0935_4\tG\t<CN0>\t100\tPASS\tAC=515;AF=0.102835;AFR_AF=0.1717;AMR_AF=0.0865;AN=5008;CIEND=-2,3;CIPOS=-2,3;CS=DEL_union;EAS_AF=0.001;END=49482003;EUR_AF=0.1133;NS=2504;SAS_AF=0.1155;SVTYPE=DEL\tGT\t0|1\n5\t53176928\tDEL_pindel_15418\tTAAAACCAGCTCCCGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAA\tT\t.\tPASS\tAC=3213;AF=0.641573;AFR_AF=0.6112;AMR_AF=0.7882;AN=5008;CS=DEL_pindel;EAS_AF=0.4792;END=53177233;EUR_AF=0.7584;MEINFO=AluYa5,1,281,+;NS=2504;SAS_AF=0.6258;SITEPOST=0.9864;SVTYPE=DEL_ALU\tGT\t1|1\n5\t53755531\tDEL_pindel_15432\tTGTCTCAAAAAACAAAACAAAACAAAAATAAAAAACAAGAGAGAGAGAAACATTACAAAGGAGTGGGGAGGGCATAGAGGCACTGCAAA\tT\t.\tPASS\tAC=3938;AF=0.786342;AFR_AF=0.7988;AMR_AF=0.8012;AN=5008;CS=DEL_pindel;EAS_AF=0.7887;END=53755619;EUR_AF=0.7664;NS=2504;SAS_AF=0.7771;SITEPOST=0.9998;SVTYPE=DEL\tGT\t1|1\n5\t55429225\tUW_VH_478\tC\t<CN0>\t100\tPASS\tAC=2063;AF=0.411941;AFR_AF=0.3185;AMR_AF=0.3818;AN=5008;CIEND=0,506;CIPOS=-617,0;CS=DEL_union;EAS_AF=0.4345;END=55430342;EUR_AF=0.5159;MC=YL_CN_ITU_1185,YL_CN_FIN_1154,YL_CN_YRI_1567,YL_CN_MSL_1142,YL_CN_STU_1191,YL_CN_GWD_1680,YL_CN_JPT_1333,BI_GS_DEL1_B1_P0941_330,YL_CN_PUR_1444,SI_BD_5569;NS=2504;SAS_AF=0.4294;SVTYPE=DEL\tGT\t1|0\n5\t55870781\tDEL_pindel_15479\tATGCTGGTGTAAACAAACCTACTGCACTGCCGGTCCTATAAAAGTATAGCACAGGCCAGGCAAGGTGACTCATACCTATAATCCCAGAGCTTTGGGAGGCTCAGACAGGAGGACTGCTTGAGCCCAGGAGTTCAAATCCAACTTGGGGAACATAGCAAGAACCTGTCTACAAAAATTTTTTTAAAGTAGCCAGGTGTGCTGACACACACCTGTGGTCTCAGCTATTCAGGAGGCTGAGGTGGGAGGATCACTTGAGCCCAGGAGATAGAGGCTGCAGTGAATTATGATTGTACCCC\tA\t.\tPASS\tAC=298;AF=0.0595048;AFR_AF=0.1808;AMR_AF=0.036;AN=5008;CS=DEL_pindel;EAS_AF=0;END=55871076;EUR_AF=0.0169;NS=2504;SAS_AF=0.0174;SITEPOST=0.9993;SVTYPE=DEL\tGT\t0|1\n5\t55927980\tALU_umary_ALU_4293\tA\t<INS:ME:ALU>\t.\t.\tAC=1177;AF=0.235024;AFR_AF=0.0522;AMR_AF=0.353;AN=5008;CS=ALU_umary;EAS_AF=0.129;EUR_AF=0.3777;MEINFO=AluYa5,10,281,+;NS=2504;SAS_AF=0.3609;SITEPOST=1;SVLEN=271;SVTYPE=ALU;TSD=AAAAGATACAGAGA\tGT\t0|1\n5\t57320371\tDUP_uwash_chr5_57320371_57338133\tC\t<CN0>\t.\tPASS\tAC=4338;AF=0.866214;AFR_AF=0.9191;AMR_AF=0.8487;AN=5008;CS=DUP_uwash;EAS_AF=0.8423;END=57338133;EUR_AF=0.7773;NS=2504;SAS_AF=0.9233;SITEPOST=1;SVTYPE=DEL\tGT\t1|1\n5\t57323407\tSI_BD_5576\tT\t<CN0>\t100\tPASS\tAC=4337;AF=0.866014;AFR_AF=0.9191;AMR_AF=0.8487;AN=5008;CIEND=-50,278;CIPOS=-278,92;CS=DEL_union;EAS_AF=0.8423;END=57333752;EUR_AF=0.7773;MC=UW_VH_4612,UW_VH_9067,UW_VH_1979,UW_VH_4283,YL_CN_ASW_1282,EM_DL_DEL77406,BI_GS_DEL1_B2_P0943_250,UW_VH_20463;NS=2504;SAS_AF=0.9223;SVTYPE=DEL\tGT\t1|1\n5\t57923170\tDEL_pindel_15526\tTAAACACAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCCGGCCTGGGCGACAGAGCGAGACTCCGTCTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA\tT\t.\tPASS\tAC=1274;AF=0.254393;AFR_AF=0.2965;AMR_AF=0.3473;AN=5008;CS=DEL_pindel;EAS_AF=0.1786;END=57923343;EUR_AF=0.1869;MEINFO=AluYb,160,280,+;NS=2504;SAS_AF=0.2791;SITEPOST=0.9999;SVTYPE=DEL_ALU\tGT\t0|1\n5\t58274026\tDEL_pindel_15532\tAAGCCCAGGAGTTCAAGACCAGCCTGGTCAACATAGGGAGACCTCATCTCGACAAATAATAAAAAATTATCTGGGGATGGTAGGGCGTGCCTGTAGTCCCAGCTACTTGGGATGCTGAGGTAGGAGGATTGCTTG\tA\t.\tPASS\tAC=560;AF=0.111821;AFR_AF=0.1067;AMR_AF=0.1239;AN=5008;CS=DEL_pindel;EAS_AF=0.125;END=58274160;EUR_AF=0.1143;NS=2504;SAS_AF=0.0941;SITEPOST=0.99695;SVTYPE=DEL\tGT\t0|1\n5\t58277277\tDEL_pindel_15534\tAAAGTTAATACCTCTTATGTTATATAAGGGAATAAGAAAAAGAAAATGAAGAT\tA\t.\tPASS\tAC=2152;AF=0.429712;AFR_AF=0.4576;AMR_AF=0.4352;AN=5008;CS=DEL_pindel;EAS_AF=0.4107;END=58277329;EUR_AF=0.4175;NS=2504;SAS_AF=0.4202;SITEPOST=0.9954;SVTYPE=DEL\tGT\t0|1\n5\t60001696\tSI_BD_5588\tG\t<CN0>\t100\tPASS\tAC=2099;AF=0.419129;AFR_AF=0.2337;AMR_AF=0.5778;AN=5008;CIEND=-105,324;CIPOS=-324,59;CS=DEL_union;EAS_AF=0.5734;END=60003676;EUR_AF=0.5378;MC=YL_CN_KHV_1247,BI_GS_DEL1_B1_P0946_4,UW_VH_5649,UW_VH_2787,YL_CN_CLM_1030,YL_CN_PJL_1248;NS=2504;SAS_AF=0.2761;SVTYPE=DEL\tGT\t0|1\n5\t62687444\tBI_GS_DEL1_B5_P0948_819\tA\t<CN0>\t100\tPASS\tAC=3238;AF=0.646565;AFR_AF=0.385;AMR_AF=0.6931;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.8591;END=62687711;EUR_AF=0.6183;MC=UW_VH_1754;NS=2504;SAS_AF=0.7771;SVTYPE=DEL\tGT\t0|1\n5\t62704438\tDEL_pindel_15591\tTGAAATATAAAATCGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATGCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCATGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAA\tT\t.\tPASS\tAC=3406;AF=0.680112;AFR_AF=0.7012;AMR_AF=0.6556;AN=5008;CS=DEL_pindel;EAS_AF=0.7034;END=62704761;EUR_AF=0.6918;MEINFO=AluYa5,1,281,+;NS=2504;SAS_AF=0.6329;SITEPOST=0.9854;SVTYPE=DEL_ALU\tGT\t1|1\n5\t65346041\tDEL_pindel_15661\tACTAAATCGAATTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGCCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGC\tA\t.\tPASS\tAC=3144;AF=0.627796;AFR_AF=0.6679;AMR_AF=0.5764;AN=5008;CS=DEL_pindel;EAS_AF=0.4831;END=65346371;EUR_AF=0.6928;MEINFO=AluYa5a1,2,281,-;NS=2504;SAS_AF=0.6922;SITEPOST=0.98425;SVTYPE=DEL_ALU\tGT\t0|1\n5\t68105932\tDEL_pindel_15729\tGGGTGTGGCGGCTCATGCCTGTAATCCCAGCACTTTGGGAGGCCAAGATGGGAGGATCACTTGAGCCCAAGAATTTGAGACCAGCCTGGAAAACT\tG\t.\tPASS\tAC=1585;AF=0.316494;AFR_AF=0.2663;AMR_AF=0.3213;AN=5008;CS=DEL_pindel;EAS_AF=0.4097;END=68106026;EUR_AF=0.2833;NS=2504;SAS_AF=0.319;SITEPOST=0.9998;SVTYPE=DEL\tGT\t1|0\n5\t70368390\tYL_CN_FIN_1166\tC\t<CN0>\t100\tPASS\tAC=2290;AF=0.457268;AFR_AF=0.2179;AMR_AF=0.4409;AN=5008;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0.6399;END=70391629;EUR_AF=0.4304;NS=2504;SAS_AF=0.6319;SVTYPE=DEL\tGT\t0|1\n5\t73648985\tDEL_pindel_15800\tTTTATTCTGTTTTTTTTTTTTTGTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCACCACCACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCTGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC\tT\t.\tPASS\tAC=3285;AF=0.65595;AFR_AF=0.6952;AMR_AF=0.5533;AN=5008;CS=DEL_pindel;EAS_AF=0.6458;END=73649303;EUR_AF=0.7038;MEINFO=AluYa,1,281,-;NS=2504;SAS_AF=0.637;SITEPOST=0.9879;SVTYPE=DEL_ALU\tGT\t1|1\n5\t75082293\tDEL_pindel_15834\tCAAAAATCAGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTCCTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAA\tC\t.\tPASS\tAC=1634;AF=0.326278;AFR_AF=0.2625;AMR_AF=0.2349;AN=5008;CS=DEL_pindel;EAS_AF=0.4663;END=75082602;EUR_AF=0.335;MEINFO=AluYa5,1,281,+;NS=2504;SAS_AF=0.3241;SITEPOST=0.9997;SVTYPE=DEL_ALU\tGT\t1|0\n5\t75435663\tDEL_pindel_15847\tTTAGAAGCTCTTGAAAGTATTTTTTTTTTTTTTTTTTTTTTTTGAGACAGAGTCTCACTCTGTCGCCCAGGCCGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCG\tT\t.\tPASS\tAC=1079;AF=0.215455;AFR_AF=0.1505;AMR_AF=0.2363;AN=5008;CS=DEL_pindel;EAS_AF=0.0238;END=75435781;EUR_AF=0.4185;MEINFO=AluYb8,206,282,-;NS=2504;SAS_AF=0.2771;SITEPOST=0.9992;SVTYPE=DEL_ALU\tGT\t1|0\n5\t77048345\tDEL_pindel_15875\tGTCCGGCTTATTTTTGTTTTGTTTTGTTTTGTTTTGTTTTTCTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCCGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC\tG\t.\tPASS\tAC=1655;AF=0.330471;AFR_AF=0.3071;AMR_AF=0.4164;AN=5008;CS=DEL_pindel;EAS_AF=0.38;END=77048681;EUR_AF=0.3111;MEINFO=AluYb6_2,1,281,-;NS=2504;SAS_AF=0.2699;SITEPOST=0.9939;SVTYPE=DEL_ALU\tGT\t1|0\n5\t77062308\tDEL_pindel_15876\tTCTCTCACTTTTATTTATTTATTTATTTATTTTTTTTTTTTTTTGAGACGGAGTCTCGTTCTGTCGCCCAGGCGGGAGTGCTGTGGCGCGATCTCCGCTCACTGCAAGCTCCGCCTTCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACCACAGGCGCCCGCCACTGCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGG\tT\t.\tPASS\tAC=2425;AF=0.484225;AFR_AF=0.5257;AMR_AF=0.4971;AN=5008;CS=DEL_pindel;EAS_AF=0.4613;END=77062618;EUR_AF=0.4543;MEINFO=AluY,3,281,-;NS=2504;SAS_AF=0.4734;SITEPOST=0.9917;SVTYPE=DEL_ALU\tGT\t1|0\n5\t78276748\tDEL_pindel_15895\tTGAATTTCTAGTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC\tT\t.\tPASS\tAC=3151;AF=0.629193;AFR_AF=0.6967;AMR_AF=0.6542;AN=5008;CS=DEL_pindel;EAS_AF=0.5833;END=78277072;EUR_AF=0.6233;MEINFO=AluYa4_5,1,281,-;NS=2504;SAS_AF=0.5736;SITEPOST=0.9771;SVTYPE=DEL_ALU\tGT\t1|0\n5\t78277726\tDEL_pindel_15896\tTAGATATGACTCTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCCGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCAGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC\tT\t.\tPASS\tAC=2338;AF=0.466853;AFR_AF=0.4637;AMR_AF=0.5865;AN=5008;CS=DEL_pindel;EAS_AF=0.3829;END=78278045;EUR_AF=0.5437;MEINFO=AluYb6_2,1,281,-;NS=2504;SAS_AF=0.3937;SITEPOST=0.9994;SVTYPE=DEL_ALU\tGT\t0|1\n5\t78426567\tSVA_umary_SVA_248\tC\t<INS:ME:SVA>\t.\t.\tAC=1476;AF=0.294728;AFR_AF=0.1604;AMR_AF=0.3559;AN=5008;CS=SVA_umary;EAS_AF=0.3621;EUR_AF=0.339;MEINFO=SVA,31,1627,+;NS=2504;SAS_AF=0.318;SITEPOST=1;SVLEN=1596;SVTYPE=SVA;TSD=AGGAATCATGGTGAAGCC\tGT\t1|0\n5\t80039371\tDEL_pindel_15928\tTAAAAAAACCCGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCGCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAA\tT\t.\tPASS\tAC=3532;AF=0.705272;AFR_AF=0.68;AMR_AF=0.7262;AN=5008;CS=DEL_pindel;EAS_AF=0.8323;END=80039680;EUR_AF=0.6541;MEINFO=AluY,1,281,+;NS=2504;SAS_AF=0.6462;SITEPOST=0.99175;SVTYPE=DEL_ALU\tGT\t0|1\n5\t80751142\tDEL_pindel_15942\tTAAATCCTCCTTCTAGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGCGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCCGGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAA\tT\t.\tPASS\tAC=1849;AF=0.369209;AFR_AF=0.6566;AMR_AF=0.3314;AN=5008;CS=DEL_pindel;EAS_AF=0.1677;END=80751471;EUR_AF=0.2893;MEINFO=AluYb6_2,1,281,+;NS=2504;SAS_AF=0.2975;SITEPOST=0.9972;SVTYPE=DEL_ALU\tGT\t1|1\n5\t81008164\tDEL_pindel_15946\tTAAAAAATAAAGATTACAAGGCCGAGGCGGGTGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGCGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCCGGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAA\tT\t.\tPASS\tAC=3169;AF=0.632788;AFR_AF=0.6422;AMR_AF=0.6844;AN=5008;CS=DEL_pindel;EAS_AF=0.5665;END=81008437;EUR_AF=0.663;MEINFO=AluYb6_2,44,281,+;NS=2504;SAS_AF=0.6207;SITEPOST=0.982;SVTYPE=DEL_ALU\tGT\t0|1\n5\t81182479\tDEL_pindel_15952\tACTGCTTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGTCGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGC\tA\t.\tPASS\tAC=3018;AF=0.602636;AFR_AF=0.708;AMR_AF=0.5951;AN=5008;CS=DEL_pindel;EAS_AF=0.501;END=81182821;EUR_AF=0.5249;MEINFO=AluYb6_2,2,281,-;NS=2504;SAS_AF=0.6503;SITEPOST=0.982;SVTYPE=DEL_ALU\tGT\t1|1\n5\t82156716\tDEL_pindel_15965\tTAAAGAATTAGAGCTCTGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCGGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAA\tT\t.\tPASS\tAC=1987;AF=0.396765;AFR_AF=0.4728;AMR_AF=0.3156;AN=5008;CS=DEL_pindel;EAS_AF=0.4891;END=82157031;EUR_AF=0.2714;MEINFO=AluYa5,1,281,+;NS=2504;SAS_AF=0.3855;SITEPOST=0.9986;SVTYPE=DEL_ALU\tGT\t0|1\n5\t82906058\tDEL_pindel_15983\tCCCTGACTGGAGGATTCTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGG\tC\t.\tPASS\tAC=2818;AF=0.5627;AFR_AF=0.5741;AMR_AF=0.585;AN=5008;CS=DEL_pindel;EAS_AF=0.5149;END=82906377;EUR_AF=0.5616;MEINFO=AluYa5,3,281,-;NS=2504;SAS_AF=0.5818;SITEPOST=0.99685;SVTYPE=DEL_ALU\tGT\t1|1\n5\t83948134\tYL_CN_FIN_1170\tT\t<CN0>\t100\tPASS\tAC=4553;AF=0.909145;AFR_AF=0.68;AMR_AF=0.9712;AN=5008;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=1;END=83955051;EUR_AF=0.997;MC=YL_CN_CDX_1068,UW_VH_16524,UW_VH_3647,EM_DL_DEL78304,UW_VH_22045,SI_BD_5696;NS=2504;SAS_AF=0.9908;SVTYPE=DEL\tGT\t1|1\n5\t84814477\tDEL_pindel_16003\tAAATCTTTAAGAGAAAACTAGGTGCATATGAGTTTTTAATGATTCAACCTTTATTGACAATTATCTATGATGTATATT\tA\t.\tPASS\tAC=1429;AF=0.285343;AFR_AF=0.1619;AMR_AF=0.402;AN=5008;CS=DEL_pindel;EAS_AF=0.2054;END=84814554;EUR_AF=0.3658;NS=2504;SAS_AF=0.3691;SITEPOST=0.9994;SVTYPE=DEL\tGT\t0|1\n5\t85405341\tDEL_pindel_16020\tAAGGAGATCATTTTGGAGCTTTAAGATTTGACTGCCCCGTTGGATTGTGGACTTGCATGGAGCCTGCAGCCCCTTTATTTTGGCCAATTTCTCCCATTTGAAATGGCTGTATTTACCCAATGCCTGTACCCCCATTGTATCTAGGAAGTAACTTACGTGCTTTTGATTTT\tA\t.\tPASS\tAC=878;AF=0.175319;AFR_AF=0.1785;AMR_AF=0.1801;AN=5008;CS=DEL_pindel;EAS_AF=0.005;END=85405510;EUR_AF=0.2734;NS=2504;SAS_AF=0.2423;SITEPOST=0.9999;SVTYPE=DEL\tGT\t0|1\n5\t86246008\tBI_GS_DEL1_B5_P0972_286\tG\t<CN0>\t100\tPASS\tAC=437;AF=0.0872604;AFR_AF=0.1566;AMR_AF=0.0432;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.002;END=86247146;EUR_AF=0.0875;MC=UW_VH_2371,EM_DL_DEL10866690,SI_BD_5709;NS=2504;SAS_AF=0.1125;SVTYPE=DEL\tGT\t0|1\n5\t86372695\tALU_umary_ALU_4445\tT\t<INS:ME:ALU>\t.\t.\tAC=2336;AF=0.466454;AFR_AF=0.2443;AMR_AF=0.5187;AN=5008;CS=ALU_umary;EAS_AF=0.5843;EUR_AF=0.5169;MEINFO=AluYa5,18,281,+;NS=2504;SAS_AF=0.5562;SITEPOST=1;SVLEN=263;SVTYPE=ALU;TSD=AAAGAAAATATTT\tGT\t1|0\n5\t87328660\tDEL_pindel_16051\tAACCTGACAGAAATCACCTTAAACAACTGTCCAAAGTTAATTTCACAGGTAATAAAACATATCTACATGCTGTACCTCCATATAATGCACTGAAAATGATACATTACTTTTGTGATGTTTTTCCTAATAATGTATGGCTTAAATATAG\tA\t.\tPASS\tAC=2394;AF=0.478035;AFR_AF=0.1309;AMR_AF=0.5764;AN=5008;CS=DEL_pindel;EAS_AF=0.7034;END=87328807;EUR_AF=0.6054;NS=2504;SAS_AF=0.5143;SITEPOST=0.9927;SVTYPE=DEL\tGT\t1|1\n5\t88032012\tDEL_pindel_16060\tTAAATATTTCAGCAACTCGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGCGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCCGACCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAA\tT\t.\tPASS\tAC=2618;AF=0.522764;AFR_AF=0.4297;AMR_AF=0.4914;AN=5008;CS=DEL_pindel;EAS_AF=0.6052;END=88032342;EUR_AF=0.5686;MEINFO=AluYb6_2,1,281,+;NS=2504;SAS_AF=0.5389;SITEPOST=0.9956;SVTYPE=DEL_ALU\tGT\t0|1\n5\t89450781\tL1_umary_LINE1_1163\tC\t<INS:ME:LINE1>\t.\t.\tAC=3899;AF=0.778554;AFR_AF=0.7262;AMR_AF=0.768;AN=5008;CS=L1_umary;EAS_AF=0.8274;EUR_AF=0.8091;MEINFO=LINE1,2,5975,+;NS=2504;SAS_AF=0.7751;SITEPOST=1;SVLEN=5973;SVTYPE=LINE1;TSD=GAAAGATGCTTAC\tGT\t0|1\n5\t90499767\tSI_BD_5728\tA\t<CN0>\t100\tPASS\tAC=3665;AF=0.731829;AFR_AF=0.534;AMR_AF=0.8069;AN=5008;CIEND=-54,304;CIPOS=-304,63;CS=DEL_union;EAS_AF=0.8006;END=90502128;EUR_AF=0.8797;MC=YL_CN_BEB_1073,YL_CN_PUR_1483,YL_CN_CLM_1049,EM_DL_DEL78428,YL_CN_FIN_1178,YL_CN_MXL_1047;NS=2504;SAS_AF=0.7229;SVTYPE=DEL\tGT\t1|1\n5\t95343311\tDEL_pindel_16177\tTAAGAAGAGGAAGATGGGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA\tT\t.\tPASS\tAC=3813;AF=0.761382;AFR_AF=0.7859;AMR_AF=0.7349;AN=5008;CS=DEL_pindel;EAS_AF=0.7758;END=95343665;EUR_AF=0.7296;MEINFO=AluYa5,1,281,+;NS=2504;SAS_AF=0.7648;SITEPOST=0.9676;SVTYPE=DEL_ALU\tGT\t1|1\n5\t95909715\tDEL_pindel_16191\tACATTTGCCCACTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCCGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCCAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCCT\tA\t.\tPASS\tAC=3212;AF=0.641374;AFR_AF=0.6437;AMR_AF=0.6297;AN=5008;CS=DEL_pindel;EAS_AF=0.6944;END=95910061;EUR_AF=0.5845;MEINFO=AluYb6_2,1,281,-;NS=2504;SAS_AF=0.6503;SITEPOST=0.9749;SVTYPE=DEL_ALU\tGT\t1|0\n5\t96325017\tDEL_pindel_16206\tTTATATATAATATATAATTATATATAATATATAATATATTATATATTATATATAATTATATATTATATATTATATACAATATATTATATATTATATATAA\tT\t.\tPASS\tAC=2689;AF=0.536941;AFR_AF=0.469;AMR_AF=0.5951;AN=5008;CS=DEL_pindel;EAS_AF=0.5883;END=96325116;EUR_AF=0.5278;NS=2504;SAS_AF=0.544;SITEPOST=0.8637;SVTYPE=DEL\tGT\t1|1\n5\t96866423\tL1_umary_LINE1_1173\tG\t<INS:ME:LINE1>\t.\t.\tAC=1454;AF=0.290335;AFR_AF=0.4304;AMR_AF=0.1974;AN=5008;CS=L1_umary;EAS_AF=0.1478;EUR_AF=0.2316;MEINFO=LINE1,5248,5988,+;NS=2504;SAS_AF=0.3742;SITEPOST=1;SVLEN=740;SVTYPE=LINE1;TSD=AAAAAATACATTTTTAG\tGT\t0|1\n5\t97035240\tBI_GS_DEL1_B5_P0983_46\tT\t<CN0>\t100\tPASS\tAC=64;AF=0.0127795;AFR_AF=0.003;AMR_AF=0.0144;AN=5008;CIEND=-1,1;CIPOS=-1,1;CS=DEL_union;EAS_AF=0;END=97035573;EUR_AF=0.0358;NS=2504;SAS_AF=0.0143;SVTYPE=DEL\tGT\t0|1\n5\t98345117\tBI_GS_DEL1_B1_P0984_298\tC\t<CN0>\t100\tPASS\tAC=3792;AF=0.757188;AFR_AF=0.6793;AMR_AF=0.7579;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.9325;END=98347479;EUR_AF=0.673;MC=YL_CN_GWD_1739,SI_BD_5762,EM_DL_DEL78554,YL_CN_STU_1232;NS=2504;SAS_AF=0.7679;SVTYPE=DEL\tGT\t0|1\n5\t98839884\tBI_GS_DEL1_B5_P0984_857\tG\t<CN0>\t100\tPASS\tAC=1777;AF=0.354832;AFR_AF=0.3858;AMR_AF=0.3415;AN=5008;CIEND=0,1;CIPOS=0,1;CS=DEL_union;EAS_AF=0.2996;END=98842906;EUR_AF=0.3628;MC=SI_BD_5768,YL_CN_MXL_1053,EM_DL_DEL78567,YL_CN_GWD_1741,UW_VH_1442;NS=2504;SAS_AF=0.3712;SVTYPE=DEL\tGT\t1|0\n5\t99174314\tDEL_pindel_16260\tTTCTTTATCATTTTCTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGCGATCTCGGCTCACTGCAAGCTCCGCCTCCCAGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCTACCACGCCCGGCTAATTTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC\tT\t.\tPASS\tAC=3131;AF=0.6252;AFR_AF=0.7421;AMR_AF=0.5893;AN=5008;CS=DEL_pindel;EAS_AF=0.5665;END=99174628;EUR_AF=0.5934;MEINFO=AluYc1,1,281,-;NS=2504;SAS_AF=0.5859;SITEPOST=0.9686;SVTYPE=DEL_ALU\tGT\t0|1\n5\t99759460\tDEL_pindel_16274\tTAAAAACACAGATAAACGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGACGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACACGGTGAAACCCCGTCTCTACTAAAAATACAAAAATTAGCCGGGCATGGTGGCGCGCGCCTGTAGTCCCAGCTACACGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGTCGAGATCGCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAAACTCCGCCTCAAAAAAAAAAAAAAAAAAAAAA\tT\t.\tPASS\tAC=3714;AF=0.741613;AFR_AF=0.6959;AMR_AF=0.7421;AN=5008;CS=DEL_pindel;EAS_AF=0.7768;END=99759778;EUR_AF=0.7396;MEINFO=AluYg6,1,281,+;NS=2504;SAS_AF=0.7689;SITEPOST=0.9675;SVTYPE=DEL_ALU\tGT\t1|0\n5\t99923533\tDEL_pindel_16284\tTAAAATGTTATTAGCGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTGGTAGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATGGCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAA\tT\t.\tPASS\tAC=1972;AF=0.39377;AFR_AF=0.6581;AMR_AF=0.4611;AN=5008;CS=DEL_pindel;EAS_AF=0.0952;END=99923838;EUR_AF=0.4354;MEINFO=AluYc1,1,281,+;NS=2504;SAS_AF=0.2536;SITEPOST=0.9902;SVTYPE=DEL_ALU\tGT\t0|1\n5\t100497396\tALU_umary_ALU_4517\tT\t<INS:ME:ALU>\t.\t.\tAC=2154;AF=0.430112;AFR_AF=0.407;AMR_AF=0.3588;AN=5008;CS=ALU_umary;EAS_AF=0.5308;EUR_AF=0.4443;MEINFO=AluUndef,1,266,-;NS=2504;SAS_AF=0.3937;SITEPOST=1;SVLEN=265;SVTYPE=ALU;TSD=null\tGT\t1|0\n5\t101693791\tBI_GS_DEL1_B2_P0987_434\tT\t<CN0>\t100\tPASS\tAC=2908;AF=0.580671;AFR_AF=0.6634;AMR_AF=0.5317;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.4643;END=101694719;EUR_AF=0.6392;MC=SI_BD_5792;NS=2504;SAS_AF=0.5634;SVTYPE=DEL\tGT\t1|1\n5\t102163354\tDEL_pindel_16331\tTTGAAGCTCACTATGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCCGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGG\tT\t.\tPASS\tAC=3078;AF=0.614617;AFR_AF=0.6657;AMR_AF=0.6052;AN=5008;CS=DEL_pindel;EAS_AF=0.6111;END=102163607;EUR_AF=0.5278;MEINFO=AluYb,83,281,-;NS=2504;SAS_AF=0.6452;SITEPOST=0.971;SVTYPE=DEL_ALU\tGT\t1|0\n5\t103738436\tALU_umary_ALU_4538\tT\t<INS:ME:ALU>\t.\t.\tAC=693;AF=0.138379;AFR_AF=0.0076;AMR_AF=0.1873;AN=5008;CS=ALU_umary;EAS_AF=0.2421;EUR_AF=0.2127;MEINFO=AluUndef,28,276,-;NS=2504;SAS_AF=0.0971;SITEPOST=1;SVLEN=248;SVTYPE=ALU;TSD=AAAGTTAAAGTTAATTTT\tGT\t0|1\n5\t104877052\tDEL_pindel_16385\tAGCTGAGATCATGCCACTGCATTCTATCCAGCCTGGGCGACAGAGCAAGACTCCGTCTCAAAAAAATAAAAAAAATATATATGTATATAT\tA\t.\tPASS\tAC=2111;AF=0.421526;AFR_AF=0.5787;AMR_AF=0.2853;AN=5008;CS=DEL_pindel;EAS_AF=0.2391;END=104877141;EUR_AF=0.3608;NS=2504;SAS_AF=0.5562;SITEPOST=0.9996;SVTYPE=DEL\tGT\t1|0\n5\t106324752\tBI_GS_DEL1_B1_P0992_238\tC\t<CN0>\t100\tPASS\tAC=2259;AF=0.451078;AFR_AF=0.3048;AMR_AF=0.4928;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.6091;END=106326434;EUR_AF=0.4463;MC=YL_CN_KHV_1294,UW_VH_503,SI_BD_5816,YL_CN_PUR_1502,EM_DL_DEL10874391,YL_CN_BEB_1087,YL_CN_PJL_1289,UW_VH_2661,UW_VH_20559,YL_CN_MSL_1186,YL_CN_CLM_1071,YL_CN_ESN_1327,YL_CN_YRI_1630,YL_CN_CEU_1583;NS=2504;SAS_AF=0.4611;SVTYPE=DEL\tGT\t1|0\n5\t110694944\tBI_GS_DEL1_B2_P0996_490\tA\t<CN0>\t100\tPASS\tAC=4520;AF=0.902556;AFR_AF=0.7617;AMR_AF=0.9308;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=1;END=110695264;EUR_AF=0.8917;MC=DEL_pindel_16504;NS=2504;SAS_AF=0.9836;SVTYPE=DEL\tGT\t1|1\n5\t112477737\tBI_GS_DEL1_B5_P0998_612\tA\t<CN0>\t100\tPASS\tAC=36;AF=0.0071885;AFR_AF=0.0023;AMR_AF=0.0058;AN=5008;CIEND=-20,21;CIPOS=-20,21;CS=DEL_union;EAS_AF=0.001;END=112478297;EUR_AF=0.0209;MC=UW_VH_3539,BI_GS_DEL1_B1_P0998_440;NS=2504;SAS_AF=0.0072;SVTYPE=DEL\tGT\t1|0\n5\t113459037\tDEL_pindel_16551\tACATTTTCTTAATTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACAGAGTCTCGCTCTGTTGCCCAGGCTGGAGTGCAGTGGCGCGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGTCTCAGCCTCCCGCGTAGCTGGGACTACAGGCGCCCGCCACCACGCCCGGCTAATTTTTTGTGTTTTTTAGTAGAGACGGGGTTTCACTGTGTTAGCCAGAATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCCT\tA\t.\tPASS\tAC=1201;AF=0.239816;AFR_AF=0.4138;AMR_AF=0.2363;AN=5008;CS=DEL_pindel;EAS_AF=0.0198;END=113459360;EUR_AF=0.2873;MEINFO=AluYf1,1,281,-;NS=2504;SAS_AF=0.1851;SITEPOST=0.9998;SVTYPE=DEL_ALU\tGT\t0|1\n5\t114731312\tDEL_pindel_16580\tGCTCTACAACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTTGCTCTGTCGCCCAGGCTGGAGCGCAGTGGCGCGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCTACCACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGC\tG\t.\tPASS\tAC=3347;AF=0.668331;AFR_AF=0.6452;AMR_AF=0.6859;AN=5008;CS=DEL_pindel;EAS_AF=0.6607;END=114731630;EUR_AF=0.6819;MEINFO=AluYc1,2,281,-;NS=2504;SAS_AF=0.681;SITEPOST=0.97515;SVTYPE=DEL_ALU\tGT\t0|1\n5\t114969401\tBI_GS_DEL1_B3_P1000_41\tA\t<CN0>\t100\tPASS\tAC=1602;AF=0.319888;AFR_AF=0.2368;AMR_AF=0.3098;AN=5008;CIEND=-14,14;CIPOS=-14,14;CS=DEL_union;EAS_AF=0.3591;END=114969875;EUR_AF=0.3787;NS=2504;SAS_AF=0.3384;SVTYPE=DEL\tGT\t0|1\n5\t115130457\tDEL_pindel_16594\tCAGATTAAGTGTAAGAAACCACTAGGGGATTGTCTAAAAATGCAGTTTCCTGGACTCACCTCCAGAGAGTCCAAGTCTGTGGGTCTAGGATGATCCCTCTAAGTTATTTCTCTCTGTTCAAGAACAATGTGTTATCACCCTAGCAGGAAACCCCTTGGGCTGGGCAGCCACAATCAGCAAATAAGGGAGAGAGACATCCTCCTAGATTGGGCAGTGGTGGTTATGTGCAGGCACAGTAGTCACCTGTTAACAGGAAAGGGTGAGGCACCTGCTTCTTGGTGGGAGCAGACAAAGTTCCTCCTTTGGCCAGAGGTTGAGGTACTGAAAGGATTCATGACTCCCATTAATTA\tC\t.\tPASS\tAC=3459;AF=0.690695;AFR_AF=0.7874;AMR_AF=0.7579;AN=5008;CS=DEL_pindel;EAS_AF=0.4871;END=115130806;EUR_AF=0.7068;NS=2504;SAS_AF=0.7055;SITEPOST=0.9878;SVTYPE=DEL\tGT\t1|1\n5\t115894136\tDEL_pindel_16615\tTAAGGATTCTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCCGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC\tT\t.\tPASS\tAC=3141;AF=0.627196;AFR_AF=0.5424;AMR_AF=0.6657;AN=5008;CS=DEL_pindel;EAS_AF=0.7361;END=115894457;EUR_AF=0.665;MEINFO=AluYb6_2,1,281,-;NS=2504;SAS_AF=0.5634;SITEPOST=0.9914;SVTYPE=DEL_ALU\tGT\t1|1\n5\t116428182\tDEL_pindel_16642\tACATACTCCAATTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCCGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTGAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC\tA\t.\tPASS\tAC=2718;AF=0.542732;AFR_AF=0.4781;AMR_AF=0.5836;AN=5008;CS=DEL_pindel;EAS_AF=0.6399;END=116428500;EUR_AF=0.5288;MEINFO=AluYb6_2,1,281,-;NS=2504;SAS_AF=0.5153;SITEPOST=0.9946;SVTYPE=DEL_ALU\tGT\t0|1\n5\t119015144\tDEL_pindel_16697\tTGAGAAGTCTCTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCAACGCCATTCTCCTGCCTCAGCCTCCCCAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC\tT\t.\tPASS\tAC=3372;AF=0.673323;AFR_AF=0.7648;AMR_AF=0.598;AN=5008;CS=DEL_pindel;EAS_AF=0.6786;END=119015464;EUR_AF=0.6561;MEINFO=AluYb6_2,1,281,-;NS=2504;SAS_AF=0.6155;SITEPOST=0.9846;SVTYPE=DEL_ALU\tGT\t1|0\n5\t119380174\tUW_VH_15926\tA\t<CN0>\t100\tPASS\tAC=3383;AF=0.675519;AFR_AF=0.7005;AMR_AF=0.6037;AN=5008;CIEND=0,415;CIPOS=-594,0;CS=DEL_union;EAS_AF=0.7817;END=119382671;EUR_AF=0.498;MC=SI_BD_5880,YL_CN_KHV_1308,YL_CN_FIN_1211,EM_DL_DEL79292,UW_VH_510;NS=2504;SAS_AF=0.7658;SVTYPE=DEL\tGT\t0|1\n5\t121059232\tBI_GS_DEL1_B1_P1007_48\tT\t<CN0>\t100\tPASS\tAC=4450;AF=0.888578;AFR_AF=0.9024;AMR_AF=0.9063;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.8244;END=121060007;EUR_AF=0.9583;MC=EM_DL_DEL10880622,SI_BD_5896,DEL_pindel_16730;NS=2504;SAS_AF=0.8517;SVTYPE=DEL\tGT\t1|1\n5\t122274354\tDEL_pindel_16755\tGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCGCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGGCAATGAAA\tG\t.\tPASS\tAC=4240;AF=0.846645;AFR_AF=0.9092;AMR_AF=0.8127;AN=5008;CS=DEL_pindel;EAS_AF=0.9861;END=122274677;EUR_AF=0.6759;MEINFO=AluYa2,1,281,+;NS=2504;SAS_AF=0.818;SITEPOST=1;SVTYPE=DEL_ALU\tGT\t1|1\n5\t122723707\tDEL_pindel_16756\tCTTTTTGACCAGTAATACTTTGACTAGTATTATTATTACTTTTTTTTGACCATTATT\tC\t.\tPASS\tAC=2154;AF=0.430112;AFR_AF=0.4289;AMR_AF=0.3905;AN=5008;CS=DEL_pindel;EAS_AF=0.4692;END=122723763;EUR_AF=0.4304;NS=2504;SAS_AF=0.4192;SITEPOST=0.9984;SVTYPE=DEL\tGT\t0|1\n5\t122976151\tALU_umary_ALU_4639\tA\t<INS:ME:ALU>\t.\t.\tAC=403;AF=0.0804712;AFR_AF=0.0605;AMR_AF=0.1124;AN=5008;CS=ALU_umary;EAS_AF=0.0675;EUR_AF=0.0746;MEINFO=AluYb8,1,267,+;NS=2504;SAS_AF=0.1043;SITEPOST=1;SVLEN=266;SVTYPE=ALU;TSD=AAAAAAACAAGGAA\tGT\t1|0\n5\t123963235\tDEL_pindel_16782\tGTGTGTGTATATATACATATATGTATATATGTGTGTATATATACATATATGTATATA\tG\t.\tPASS\tAC=1462;AF=0.291933;AFR_AF=0.2095;AMR_AF=0.3055;AN=5008;CS=DEL_pindel;EAS_AF=0.375;END=123963291;EUR_AF=0.3121;NS=2504;SAS_AF=0.2873;SITEPOST=0.9827;SVTYPE=DEL\tGT\t0|1\n5\t124363835\tDEL_pindel_16795\tTAAAAAAATCCAGATGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCGCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA\tT\t.\tPASS\tAC=1440;AF=0.28754;AFR_AF=0.6513;AMR_AF=0.1816;AN=5008;CS=DEL_pindel;EAS_AF=0.0308;END=124364161;EUR_AF=0.2346;MEINFO=AluYa1_1,1,281,+;NS=2504;SAS_AF=0.1902;SITEPOST=0.99075;SVTYPE=DEL_ALU\tGT\t0|1\n5\t124484339\tDEL_pindel_16797\tGACAAGAAGAGTTTCCATTGATCATTGTACCTTGGATATCTTCTCCATTCTTT\tG\t.\tPASS\tAC=2367;AF=0.472644;AFR_AF=0.4697;AMR_AF=0.4798;AN=5008;CS=DEL_pindel;EAS_AF=0.4702;END=124484391;EUR_AF=0.4612;NS=2504;SAS_AF=0.4857;SITEPOST=0.9997;SVTYPE=DEL\tGT\t1|0\n5\t126458368\tBI_GS_DEL1_B4_P1012_86\tG\t<CN0>\t100\tPASS\tAC=2644;AF=0.527955;AFR_AF=0.4198;AMR_AF=0.5836;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.6458;END=126458811;EUR_AF=0.4612;MC=DEL_pindel_16829;NS=2504;SAS_AF=0.5818;SVTYPE=DEL\tGT\t1|1\n5\t127172319\tSI_BD_5930\tG\t<CN0>\t100\tPASS\tAC=2976;AF=0.594249;AFR_AF=0.5741;AMR_AF=0.6369;AN=5008;CIEND=-66,282;CIPOS=-282,59;CS=DEL_union;EAS_AF=0.5784;END=127173286;EUR_AF=0.6869;MC=UW_VH_11070,EM_DL_DEL10883636,YL_CN_CEU_1612;NS=2504;SAS_AF=0.5123;SVTYPE=DEL\tGT\t1|0\n5\t127172367\tBI_GS_DEL1_B5_P1013_223\tG\t<CN0>\t100\tPASS\tAC=2963;AF=0.591653;AFR_AF=0.5719;AMR_AF=0.6326;AN=5008;CIEND=-28,28;CIPOS=-28,28;CS=DEL_union;EAS_AF=0.5744;END=127172679;EUR_AF=0.6849;NS=2504;SAS_AF=0.5112;SVTYPE=DEL\tGT\t1|0\n5\t127407440\tBI_GS_DEL1_B4_P1013_89\tC\t<CN0>\t100\tPASS\tAC=1871;AF=0.373602;AFR_AF=0.6256;AMR_AF=0.3963;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.3581;END=127410918;EUR_AF=0.2078;MC=UW_VH_17605,UW_VH_6943,YL_CN_STU_1267,UW_VH_1764,EM_DL_DEL79507,UW_VH_19289,UW_VH_10610,UW_VH_13833,SI_BD_5934,UW_VH_5586,UW_VH_23140,UW_VH_12000,YL_CN_GIH_996,UW_VH_15802,UW_VH_14494;NS=2504;SAS_AF=0.2035;SVTYPE=DEL\tGT\t0|1\n5\t128314869\tALU_umary_ALU_4668\tG\t<INS:ME:ALU>\t.\t.\tAC=752;AF=0.15016;AFR_AF=0.1384;AMR_AF=0.1643;AN=5008;CS=ALU_umary;EAS_AF=0.0238;EUR_AF=0.2704;MEINFO=AluUndef,1,265,+;NS=2504;SAS_AF=0.1626;SITEPOST=1;SVLEN=264;SVTYPE=ALU;TSD=AAGAAGTCACTTTTG\tGT\t1|1\n5\t130853258\tALU_umary_ALU_4684\tG\t<INS:ME:ALU>\t.\t.\tAC=2116;AF=0.422524;AFR_AF=0.2738;AMR_AF=0.438;AN=5008;CS=ALU_umary;EAS_AF=0.371;EUR_AF=0.5547;MEINFO=AluYb8,11,278,-;NS=2504;SAS_AF=0.5297;SITEPOST=1;SVLEN=267;SVTYPE=ALU;TSD=AAAAAATCTCTCAAATG\tGT\t1|1\n5\t132934098\tL1_umary_LINE1_1212\tC\t<INS:ME:LINE1>\t.\t.\tAC=410;AF=0.081869;AFR_AF=0.152;AMR_AF=0.0533;AN=5008;CS=L1_umary;EAS_AF=0.0605;EUR_AF=0.0656;MEINFO=LINE1,2411,6009,+;NS=2504;SAS_AF=0.046;SITEPOST=1;SVLEN=3598;SVTYPE=LINE1;TSD=AAGAGGTGCTGGC\tGT\t0|1\n5\t135115148\tBI_GS_DEL1_B2_P1021_98\tT\t<CN0>\t100\tPASS\tAC=1656;AF=0.330671;AFR_AF=0.1127;AMR_AF=0.4063;AN=5008;CIEND=-1,1;CIPOS=-1,1;CS=DEL_union;EAS_AF=0.2371;END=135120700;EUR_AF=0.5417;MC=EM_DL_DEL79690,YL_CN_ASW_1352;NS=2504;SAS_AF=0.4509;SVTYPE=DEL\tGT\t1|1\n5\t136851113\tDUP_uwash_chr5_136851112_136857394\tG\t<CN0>\t.\tPASS\tAC=4957;AF=0.989816;AFR_AF=0.9629;AMR_AF=0.9971;AN=5008;CS=DUP_uwash;EAS_AF=1;END=136857394;EUR_AF=1;NS=2504;SAS_AF=1;SITEPOST=1;SVTYPE=DEL\tGT\t1|1\n5\t136854589\tYL_CN_CDX_1103\tT\t<CN0>\t100\tPASS\tAC=4934;AF=0.985224;AFR_AF=0.9448;AMR_AF=0.9986;AN=5008;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=1;END=136856557;EUR_AF=1;MC=YL_CN_PEL_1134,YL_CN_IBS_1143,YL_CN_ASW_1354,YL_CN_LWK_1259,YL_CN_CHB_1300,YL_CN_ACB_1490,YL_CN_KHV_1319,BI_GS_DEL1_B2_P1022_726,YL_CN_FIN_1225,YL_CN_ITU_1272,UW_VH_513,YL_CN_JPT_1418,YL_CN_ESN_1361,YL_CN_STU_1272,YL_CN_GWD_1799,SI_BD_5987,UW_VH_16971,YL_CN_BEB_1112;NS=2504;SAS_AF=1;SVTYPE=DEL\tGT\t1|1\n5\t140554408\tDUP_gs_CNV_5_140554408_140558942\tC\t<CN0>,<CN2>,<CN3>,<CN4>,<CN5>,<CN6>,<CN7>\t.\tPASS\tAC=38,484,870,34,9,4,10;AF=0.00758786,0.0966454,0.173722,0.00678914,0.00179712,0.00079872,0.00199681;AFR_AF=0,0.121,0.0212,0,0,0.0008,0;AMR_AF=0.0058,0.0735,0.2709,0.0058,0.0014,0,0.0014;AN=5008;CS=DUP_gs;EAS_AF=0.004,0.12,0.1062,0.005,0.002,0.001,0.001;END=140558942;EUR_AF=0.0149,0.0944,0.3072,0.0149,0.005,0.002,0.007;NS=2504;SAS_AF=0.0153,0.0583,0.2434,0.0102,0.001,0,0.001;SITEPOST=0.9973;SVTYPE=CNV\tGT\t0|4\n5\t142935366\tDEL_pindel_17132\tTAAAAATAAAAGTATGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGTGGAGCTTGCAGTGAGCGGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAATA\tT\t.\tPASS\tAC=2785;AF=0.55611;AFR_AF=0.702;AMR_AF=0.5447;AN=5008;CS=DEL_pindel;EAS_AF=0.4256;END=142935678;EUR_AF=0.5905;MEINFO=AluYa4b,1,281,+;NS=2504;SAS_AF=0.4663;SITEPOST=0.9939;SVTYPE=DEL_ALU\tGT\t1|1\n5\t144059460\tCINV_delly_INV00084076\tC\t<INV>\t.\tPASS\tAC=1040;AF=0.207668;AFR_AF=0.1339;AMR_AF=0.1499;AN=5008;CIEND=-183,183;CIPOS=-183,183;CS=CINV_delly;EAS_AF=0.4256;END=144059732;EUR_AF=0.0825;IMPRECISE;NS=2504;SAS_AF=0.2526;SVTYPE=INV\tGT\t1|0\n5\t146369626\tALU_umary_ALU_4737\tA\t<INS:ME:ALU>\t.\t.\tAC=1351;AF=0.269768;AFR_AF=0.0651;AMR_AF=0.3703;AN=5008;CS=ALU_umary;EAS_AF=0.1944;EUR_AF=0.4493;MEINFO=AluUndef,1,260,+;NS=2504;SAS_AF=0.3681;SITEPOST=1;SVLEN=259;SVTYPE=ALU;TSD=AAAACCATAAAACA\tGT\t1|0\n5\t146380181\tDEL_pindel_17196\tATGATCAGTAACTATTAGGTTGGTGCAAAAGTAATTGTGGATTTGCCATTTTTAATGGCAAAAACCACAATTACTT\tA\t.\tPASS\tAC=1369;AF=0.273363;AFR_AF=0.4054;AMR_AF=0.1412;AN=5008;CS=DEL_pindel;EAS_AF=0.2857;END=146380256;EUR_AF=0.1779;NS=2504;SAS_AF=0.274;SITEPOST=0.9999;SVTYPE=DEL\tGT\t0|1\n5\t146622654\tBI_GS_DEL1_B5_P1032_815\tA\t<CN0>\t100\tPASS\tAC=1849;AF=0.369209;AFR_AF=0.4054;AMR_AF=0.4899;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.2609;END=146623087;EUR_AF=0.4145;MC=UW_VH_518;NS=2504;SAS_AF=0.2996;SVTYPE=DEL\tGT\t1|1\n5\t147462155\tDEL_pindel_17219\tTTATATATTCTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTGTCGCCCAGGCTGGAGTGCAGTGGCGCAATCTCGGCTCACTGCAGGCTCCGCCCCCTGGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCTCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACAGGGTTTCACCGTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC\tT\t.\tPASS\tAC=3535;AF=0.705871;AFR_AF=0.7284;AMR_AF=0.6873;AN=5008;CS=DEL_pindel;EAS_AF=0.7956;END=147462471;EUR_AF=0.5427;MEINFO=AluYe,1,281,-;NS=2504;SAS_AF=0.7638;SITEPOST=0.96125;SVTYPE=DEL_ALU\tGT\t0|1\n5\t147552866\tCINV_delly_INV00084159\tT\t<INV>\t.\tPASS\tAC=2246;AF=0.448482;AFR_AF=0.4902;AMR_AF=0.3804;AN=5008;CIEND=-274,274;CIPOS=-274,274;CS=CINV_delly;EAS_AF=0.3819;END=147554617;EUR_AF=0.5338;IMPRECISE;NS=2504;SAS_AF=0.4213;SVTYPE=INV\tGT\t1|1\n5\t148385841\tDEL_pindel_17244\tAAAAAAAGAAGTTCTAGATTCAGCAAGCAAGAGAAGCAGGGATAAAACCTTCTTAAGATCTAAGTATACTTAGTTTAAAGGCCCCATACCTCGTTATCTC\tA\t.\tPASS\tAC=835;AF=0.166733;AFR_AF=0.115;AMR_AF=0.1614;AN=5008;CS=DEL_pindel;EAS_AF=0.1915;END=148385940;EUR_AF=0.162;NS=2504;SAS_AF=0.2198;SITEPOST=1;SVTYPE=DEL\tGT\t0|1\n5\t148401433\tDEL_pindel_17245\tTTCACAAACTCTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCC\tT\t.\tPASS\tAC=2211;AF=0.441494;AFR_AF=0.5855;AMR_AF=0.4323;AN=5008;CS=DEL_pindel;EAS_AF=0.3175;END=148401591;EUR_AF=0.3738;NS=2504;SAS_AF=0.4509;SITEPOST=0.996;SVTYPE=DEL\tGT\t1|1\n5\t150210002\tDEL_pindel_17286\tCCTATAGAGTCATTTCAGATCTAAAGATACACATAGGCTGAGAGTGAAAGAATGGAAAAACATATTTCATACAAATAATAATGAAAAGAGATCAAGGCAGAAATTTCCCCAATAATAGTTGGATAATT\tC\t.\tPASS\tAC=278;AF=0.0555112;AFR_AF=0.0076;AMR_AF=0.0389;AN=5008;CS=DEL_pindel;EAS_AF=0.1458;END=150210129;EUR_AF=0.0388;NS=2504;SAS_AF=0.0562;SITEPOST=0.9992;SVTYPE=DEL\tGT\t1|0\n5\t150789783\tUW_VH_20188\tC\t<CN0>\t100\tPASS\tAC=1171;AF=0.233826;AFR_AF=0.1309;AMR_AF=0.1066;AN=5008;CIEND=0,368;CIPOS=-414,0;CS=DEL_union;EAS_AF=0.3879;END=150792627;EUR_AF=0.174;MC=YL_CN_GWD_1817,UW_VH_4942,EM_DL_DEL80219,UW_VH_18450,YL_CN_ASW_1371,UW_VH_11116,UW_VH_14444,UW_VH_2720,UW_VH_21684,YL_CN_CHB_1318,UW_VH_2776,SI_BD_6068,UW_VH_25253,UW_VH_14317,YL_CN_KHV_1331,UW_VH_11294,BI_GS_CNV_5_150789594_150792683,UW_VH_6944;NS=2504;SAS_AF=0.3661;SVTYPE=DEL\tGT\t0|1\n5\t151760910\tDEL_pindel_17321\tACTTAAATGTATTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGC\tA\t.\tPASS\tAC=483;AF=0.0964457;AFR_AF=0.0106;AMR_AF=0.2233;AN=5008;CS=DEL_pindel;EAS_AF=0.0198;END=151761223;EUR_AF=0.159;MEINFO=AluYa5,2,281,-;NS=2504;SAS_AF=0.137;SITEPOST=0.9992;SVTYPE=DEL_ALU\tGT\t1|0\n5\t152529738\tALU_umary_ALU_4773\tT\t<INS:ME:ALU>\t.\t.\tAC=940;AF=0.1877;AFR_AF=0.1384;AMR_AF=0.1671;AN=5008;CS=ALU_umary;EAS_AF=0.0883;EUR_AF=0.3231;MEINFO=AluUndef,1,281,-;NS=2504;SAS_AF=0.2321;SITEPOST=1;SVLEN=280;SVTYPE=ALU;TSD=TCAACACAGTATTTTT\tGT\t1|1\n5\t154315917\tDEL_pindel_17386\tCAGTGAGCCAAGATCCCGCCATTGCACTCCAGCCTGGGCGACAGAGCCAGACTCCGTCTCAAAAAAAAAAAAAAAAGTAATTAATA\tC\t.\tPASS\tAC=4751;AF=0.948682;AFR_AF=0.8684;AMR_AF=0.9755;AN=5008;CS=DEL_pindel;EAS_AF=0.9782;END=154316002;EUR_AF=0.9751;NS=2504;SAS_AF=0.9806;SITEPOST=1;SVTYPE=DEL\tGT\t1|1\n5\t155290624\tALU_umary_ALU_4788\tC\t<INS:ME:ALU>\t.\t.\tAC=941;AF=0.187899;AFR_AF=0.0159;AMR_AF=0.121;AN=5008;CS=ALU_umary;EAS_AF=0.3472;EUR_AF=0.2783;MEINFO=AluUndef,1,281,+;NS=2504;SAS_AF=0.2106;SITEPOST=1;SVLEN=280;SVTYPE=ALU;TSD=AACAAAGAAAATTC\tGT\t0|1\n5\t155311785\tBI_GS_DEL1_B4_P1041_70\tA\t<CN0>\t100\tPASS\tAC=2175;AF=0.434305;AFR_AF=0.6762;AMR_AF=0.5461;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.2718;END=155312580;EUR_AF=0.3101;MC=EM_DL_DEL10894470,UW_VH_22900,UW_VH_21180,SI_BD_6092,DEL_pindel_17408,UW_VH_520;NS=2504;SAS_AF=0.3231;SVTYPE=DEL\tGT\t1|0\n5\t158592397\tDEL_pindel_17476\tAAATAATATCCTGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAT\tA\t.\tPASS\tAC=3270;AF=0.652955;AFR_AF=0.7595;AMR_AF=0.6628;AN=5008;CS=DEL_pindel;EAS_AF=0.5288;END=158592742;EUR_AF=0.6064;MEINFO=AluYa5,1,281,+;NS=2504;SAS_AF=0.6779;SITEPOST=0.9887;SVTYPE=DEL_ALU\tGT\t1|1\n5\t159742556\tDEL_pindel_17500\tAAGGGGATGAATAAAAACAAAAAAAGATTAGAGTACGATCCCAGTTAAACTACATTCATGCACACACACATATGCAAAAATATTAACTGTGTAATCAGAGTGGTAGG\tA\t.\tPASS\tAC=1612;AF=0.321885;AFR_AF=0.0877;AMR_AF=0.3977;AN=5008;CS=DEL_pindel;EAS_AF=0.372;END=159742662;EUR_AF=0.4811;NS=2504;SAS_AF=0.3691;SITEPOST=0.9996;SVTYPE=DEL\tGT\t0|1\n5\t160431305\tDEL_pindel_17523\tTAGATTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCTTGACCTCGTGATCCGCCCTCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC\tT\t.\tPASS\tAC=2956;AF=0.590256;AFR_AF=0.646;AMR_AF=0.4856;AN=5008;CS=DEL_pindel;EAS_AF=0.5724;END=160431636;EUR_AF=0.5875;MEINFO=AluYa5,1,281,-;NS=2504;SAS_AF=0.6104;SITEPOST=0.9919;SVTYPE=DEL_ALU\tGT\t1|1\n5\t164366297\tDEL_pindel_17607\tTCTCTAAGGTCTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGC\tT\t.\tPASS\tAC=2862;AF=0.571486;AFR_AF=0.5862;AMR_AF=0.5937;AN=5008;CS=DEL_pindel;EAS_AF=0.6369;END=164366607;EUR_AF=0.506;MEINFO=AluYa5,2,281,-;NS=2504;SAS_AF=0.5358;SITEPOST=0.99485;SVTYPE=DEL_ALU\tGT\t1|1\n5\t166294129\tDEL_pindel_17636\tATTTTTTGTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATT\tA\t.\tPASS\tAC=4372;AF=0.873003;AFR_AF=0.8676;AMR_AF=0.8977;AN=5008;CS=DEL_pindel;EAS_AF=0.8581;END=166294321;EUR_AF=0.8738;NS=2504;SAS_AF=0.8773;SITEPOST=0.9999;SVTYPE=DEL\tGT\t1|1\n5\t167299359\tDEL_pindel_17667\tGGAAAGAGAAGGAAGGAAGGAAGGAAAAGAAAGAAGGAAAGAAAGGAAGAAAAAAAGAGAAAGAGAGAGACAGAAAGAAAGCAAACAAGCACGAAAGAAAGAAAGCACGAAAGAAAGAAAGAAAGAAAGAAAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAGAAAGAAAGAAAGAAAGAAAGAAAGAAA\tG\t.\tPASS\tAC=1395;AF=0.278554;AFR_AF=0.0734;AMR_AF=0.3156;AN=5008;CS=DEL_pindel;EAS_AF=0.3026;END=167299582;EUR_AF=0.3847;NS=2504;SAS_AF=0.3957;SITEPOST=0.9992;SVTYPE=DEL\tGT\t1|0\n5\t168394430\tDEL_pindel_17695\tGCCATCTCAAATCTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATCTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGC\tG\t.\tPASS\tAC=133;AF=0.0265575;AFR_AF=0.0076;AMR_AF=0.0216;AN=5008;CS=DEL_pindel;EAS_AF=0.0258;END=168394743;EUR_AF=0.0547;MEINFO=AluYa5,2,281,-;NS=2504;SAS_AF=0.0276;SITEPOST=0.9999;SVTYPE=DEL_ALU\tGT\t1|0\n5\t168742523\tDEL_pindel_17710\tTAAAAATGTTCCCTGACTCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAA\tT\t.\tPASS\tAC=3318;AF=0.66254;AFR_AF=0.674;AMR_AF=0.6787;AN=5008;CS=DEL_pindel;EAS_AF=0.7113;END=168742757;EUR_AF=0.6074;MEINFO=AluY,86,281,+;NS=2504;SAS_AF=0.6421;SITEPOST=0.9659;SVTYPE=DEL_ALU\tGT\t0|1\n5\t168911933\tALU_umary_ALU_4861\tG\t<INS:ME:ALU>\t.\t.\tAC=1218;AF=0.243211;AFR_AF=0.1392;AMR_AF=0.1859;AN=5008;CS=ALU_umary;EAS_AF=0.3948;EUR_AF=0.2694;MEINFO=AluUndef,1,281,+;NS=2504;SAS_AF=0.2413;SITEPOST=1;SVLEN=280;SVTYPE=ALU;TSD=AAAGAG\tGT\t1|0\n5\t169597462\tCINV_delly_INV00084708\tG\t<INV>\t.\tPASS\tAC=2182;AF=0.435703;AFR_AF=0.1165;AMR_AF=0.5476;AN=5008;CIEND=-15,15;CIPOS=-15,15;CS=CINV_delly;EAS_AF=0.6994;END=169598751;EUR_AF=0.4732;IMPRECISE;NS=2504;SAS_AF=0.4775;SVTYPE=INV\tGT\t0|1\n5\t170158817\tDEL_pindel_17725\tTGAAAAGCTGAGATCCCGCCACTGCACTCCAGCCTGGGCCACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA\tT\t.\tPASS\tAC=3364;AF=0.671725;AFR_AF=0.6581;AMR_AF=0.7161;AN=5008;CS=DEL_pindel;EAS_AF=0.7411;END=170158906;EUR_AF=0.6412;MEINFO=AluYa8,226,282,+;NS=2504;SAS_AF=0.6186;SITEPOST=0.98925;SVTYPE=DEL_ALU\tGT\t1|1\n5\t171893746\tALU_umary_ALU_4873\tT\t<INS:ME:ALU>\t.\t.\tAC=1070;AF=0.213658;AFR_AF=0.0673;AMR_AF=0.3199;AN=5008;CS=ALU_umary;EAS_AF=0.2331;EUR_AF=0.338;MEINFO=AluYc1,1,275,-;NS=2504;SAS_AF=0.1881;SITEPOST=1;SVLEN=274;SVTYPE=ALU;TSD=TCCCCAGATTTCT\tGT\t1|1\n5\t172973014\tBI_GS_DEL1_B1_P1058_883\tG\t<CN0>\t100\tPASS\tAC=891;AF=0.177915;AFR_AF=0.1619;AMR_AF=0.2017;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.1349;END=172974746;EUR_AF=0.2107;MC=YL_CN_TSI_1236,YL_CN_BEB_1140,YL_CN_CLM_1121,UW_VH_1454,YL_CN_JPT_1446,EM_DL_DEL10901725,UW_VH_24831;NS=2504;SAS_AF=0.1933;SVTYPE=DEL\tGT\t0|1\n5\t175353978\tDUP_gs_CNV_5_175353978_175371353\tC\t<CN2>\t.\tPASS\tAC=4980;AF=0.994409;AFR_AF=0.9826;AMR_AF=0.9971;AN=5008;CS=DUP_gs;EAS_AF=0.998;END=175371353;EUR_AF=0.999;NS=2504;SAS_AF=1;SITEPOST=1;SVTYPE=DUP\tGT\t1|1\n5\t177199170\tUW_VH_14200\tT\t<CN0>\t100\tPASS\tAC=2820;AF=0.563099;AFR_AF=0.5567;AMR_AF=0.5403;AN=5008;CIEND=0,128;CIPOS=-59,0;CS=DEL_union;EAS_AF=0.5625;END=177205310;EUR_AF=0.5398;NS=2504;SAS_AF=0.6125;SVTYPE=DEL\tGT\t1|0\n5\t177405751\tEM_DL_DEL10903754\tT\t<CN0>\t100\tPASS\tAC=3558;AF=0.710463;AFR_AF=0.5446;AMR_AF=0.8487;AN=5008;CIEND=-150,150;CIPOS=-150,150;CS=DEL_union;EAS_AF=0.6538;END=177406551;EUR_AF=0.833;NS=2504;SAS_AF=0.7689;SVTYPE=DEL\tGT\t1|1\n5\t180375655\tDUP_gs_CNV_5_180375655_180420806\tA\t<CN0>,<CN2>\t.\tPASS\tAC=1069,11;AF=0.213458,0.00219649;AFR_AF=0.1044,0.0008;AMR_AF=0.353,0;AN=5008;CS=DUP_gs;EAS_AF=0.251,0.005;END=180420806;EUR_AF=0.3221,0.005;MC=UW_VH_5215,SI_BD_6266,UW_VH_11402,YL_CN_CDX_1148,UW_VH_2555;NS=2504;SAS_AF=0.1115,0;SITEPOST=1;SVTYPE=CNV\tGT\t1|0\n6\t256502\tDUP_gs_CNV_6_256502_293373\tG\t<CN2>,<CN3>\t.\tPASS\tAC=3317,33;AF=0.66234,0.00658946;AFR_AF=0.8661,0.0098;AMR_AF=0.4078,0.0043;AN=5008;CS=DUP_gs;EAS_AF=0.5685,0.0089;END=293373;EUR_AF=0.5358,0.003;NS=2504;SAS_AF=0.7945,0.0051;SITEPOST=0.9999;SVTYPE=CNV\tGT\t1|0\n6\t305181\tDUP_gs_CNV_6_305181_340601\tA\t<CN2>,<CN3>,<CN4>\t.\tPASS\tAC=4153,76,9;AF=0.829273,0.0151757,0.00179712;AFR_AF=0.8949,0.0113,0;AMR_AF=0.7839,0.0173,0.0043;AN=5008;CS=DUP_gs;EAS_AF=0.7639,0.0159,0.002;END=340601;EUR_AF=0.7922,0.0219,0.004;NS=2504;SAS_AF=0.8783,0.0112,0;SITEPOST=0.9998;SVTYPE=CNV\tGT\t1|1\n6\t327586\tDUP_gs_CNV_6_327586_368712\tA\t<CN2>,<CN3>,<CN4>\t.\tPASS\tAC=4155,75,9;AF=0.829673,0.014976,0.00179712;AFR_AF=0.8941,0.0113,0;AMR_AF=0.7824,0.0173,0.0043;AN=5008;CS=DUP_gs;EAS_AF=0.7629,0.0149,0.002;END=368712;EUR_AF=0.7972,0.0219,0.004;NS=2504;SAS_AF=0.8783,0.0112,0;SITEPOST=0.9997;SVTYPE=CNV\tGT\t1|1\n6\t380338\tDEL_pindel_17962\tCCTCCCCACGGTCTTCCTGGATGGGCTTCAAACCTCCTTTCTGGCCTCTACGCCCTGGGTCCCGCCCCCAGCCCAGA\tC\t.\tPASS\tAC=2315;AF=0.46226;AFR_AF=0.4841;AMR_AF=0.4496;AN=5008;CS=DEL_pindel;EAS_AF=0.4474;END=380414;EUR_AF=0.4503;NS=2504;SAS_AF=0.4693;SITEPOST=1;SVTYPE=DEL\tGT\t1|0\n6\t666377\tEM_DL_DEL10906321\tA\t<CN0>\t100\tPASS\tAC=2830;AF=0.565096;AFR_AF=0.3714;AMR_AF=0.621;AN=5008;CIEND=-150,150;CIPOS=-150,150;CS=DEL_union;EAS_AF=0.7956;END=667821;EUR_AF=0.6004;MC=YL_CN_CEU_1715,YL_CN_PUR_1628,YL_CN_ASW_1430,YL_CN_YRI_1763,YL_CN_JPT_1496,YL_CN_GBR_1322,YL_CN_ITU_1353,YL_CN_PEL_1204,YL_CN_CHB_1375,YL_CN_KHV_1385,YL_CN_CHS_1368,YL_CN_CLM_1158;NS=2504;SAS_AF=0.5133;SVTYPE=DEL\tGT\t1|1\n6\t1682791\tDEL_pindel_18013\tTTCATTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC\tT\t.\tPASS\tAC=3847;AF=0.768171;AFR_AF=0.789;AMR_AF=0.6859;AN=5008;CS=DEL_pindel;EAS_AF=0.7173;END=1683102;EUR_AF=0.8121;MEINFO=AluYa4_5,1,281,-;NS=2504;SAS_AF=0.8057;SITEPOST=0.9913;SVTYPE=DEL_ALU\tGT\t1|0\n6\t2568176\tUW_VH_2462\tA\t<CN0>\t100\tPASS\tAC=326;AF=0.0650958;AFR_AF=0.1498;AMR_AF=0.0461;AN=5008;CIEND=0,402;CIPOS=-593,0;CS=DEL_union;EAS_AF=0;END=2571941;EUR_AF=0.0447;MC=YL_CN_PJL_1399,BI_GS_DEL1_B1_P1069_541,EM_DL_DEL81425;NS=2504;SAS_AF=0.0521;SVTYPE=DEL\tGT\t1|0\n6\t2605520\tDEL_pindel_18046\tGGGAAGGAATGAAGGAAGGGAGGGAGGGAGGGAAGGAGGGAAGGGAAGGGAAGGGAAGGAA\tG\t.\tPASS\tAC=2970;AF=0.593051;AFR_AF=0.3011;AMR_AF=0.6729;AN=5008;CS=DEL_pindel;EAS_AF=0.753;END=2605580;EUR_AF=0.6481;NS=2504;SAS_AF=0.7096;SITEPOST=0.986;SVTYPE=DEL\tGT\t1|0\n6\t2774017\tALU_umary_ALU_4925\tT\t<INS:ME:ALU>\t.\t.\tAC=391;AF=0.0780751;AFR_AF=0.0492;AMR_AF=0.0692;AN=5008;CS=ALU_umary;EAS_AF=0.0556;EUR_AF=0.1203;MEINFO=AluYa5,16,280,-;NS=2504;SAS_AF=0.1033;SITEPOST=1;SVLEN=264;SVTYPE=ALU;TSD=AAAGAATCAATTAT\tGT\t1|0\n6\t4050241\tDEL_pindel_18082\tTGGAAACAGTTGTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAATAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCACAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCCA\tT\t.\tPASS\tAC=3362;AF=0.671326;AFR_AF=0.6868;AMR_AF=0.683;AN=5008;CS=DEL_pindel;EAS_AF=0.6409;END=4050560;EUR_AF=0.6869;MEINFO=AluYa4_5,1,281,-;NS=2504;SAS_AF=0.6575;SITEPOST=0.9764;SVTYPE=DEL_ALU\tGT\t0|1\n6\t5898451\tBI_GS_DEL1_B2_P1072_726\tT\t<CN0>\t100\tPASS\tAC=865;AF=0.172724;AFR_AF=0.1324;AMR_AF=0.2046;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.1399;END=5898882;EUR_AF=0.2107;MC=DEL_pindel_18118,UW_VH_2049;NS=2504;SAS_AF=0.1994;SVTYPE=DEL\tGT\t0|1\n6\t6068837\tDEL_pindel_18123\tTCCCTCTTTTTCTTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTATTTATTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGC\tT\t.\tPASS\tAC=1787;AF=0.356829;AFR_AF=0.5242;AMR_AF=0.2925;AN=5008;CS=DEL_pindel;EAS_AF=0.2887;END=6069178;EUR_AF=0.3449;MEINFO=AluYa4_4,2,281,-;NS=2504;SAS_AF=0.2587;SITEPOST=0.9991;SVTYPE=DEL_ALU\tGT\t1|0\n6\t6277340\tDEL_pindel_18128\tTAAGACTGACACTGTGCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTGGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA\tT\t.\tPASS\tAC=2795;AF=0.558107;AFR_AF=0.6793;AMR_AF=0.5331;AN=5008;CS=DEL_pindel;EAS_AF=0.4276;END=6277602;EUR_AF=0.5666;MEINFO=AluY,70,281,+;NS=2504;SAS_AF=0.5378;SITEPOST=0.9932;SVTYPE=DEL_ALU\tGT\t1|0\n6\t7717367\tDEL_pindel_18171\tTAAAGAATGGCTAAAGAGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATTCTGGCTAACACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTGGTAGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCGCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA\tT\t.\tPASS\tAC=3739;AF=0.746605;AFR_AF=0.7617;AMR_AF=0.7219;AN=5008;CS=DEL_pindel;EAS_AF=0.7698;END=7717702;EUR_AF=0.7227;MEINFO=AluYc1,1,281,+;NS=2504;SAS_AF=0.7444;SITEPOST=0.96995;SVTYPE=DEL_ALU\tGT\t1|0\n6\t8337673\tBI_GS_DEL1_B1_P1075_283\tG\t<CN0>\t100\tPASS\tAC=850;AF=0.169728;AFR_AF=0.1248;AMR_AF=0.2089;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.0169;END=8341524;EUR_AF=0.2783;MC=UW_VH_2051,UW_VH_10234,EM_DL_DEL81768,YL_CN_YRI_1775,UW_VH_4536,UW_VH_14640,UW_VH_7018,UW_VH_19891;NS=2504;SAS_AF=0.2485;SVTYPE=DEL\tGT\t0|1\n6\t9014816\tDEL_pindel_18213\tTAAAAAATGCTCCTCACAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAA\tT\t.\tPASS\tAC=2846;AF=0.568291;AFR_AF=0.711;AMR_AF=0.5908;AN=5008;CS=DEL_pindel;EAS_AF=0.5466;END=9014924;EUR_AF=0.4751;MEINFO=AluYa8,215,282,+;NS=2504;SAS_AF=0.4775;SITEPOST=0.9942;SVTYPE=DEL_ALU\tGT\t1|1\n6\t9460377\tDEL_pindel_18227\tTAAAAATTAATAAACAGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCATCTCTACTAAAAAAAAAAAATACAAAAAATTAGCCGGGCGCGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCCGGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAA\tT\t.\tPASS\tAC=2969;AF=0.592851;AFR_AF=0.5598;AMR_AF=0.572;AN=5008;CS=DEL_pindel;EAS_AF=0.7024;END=9460714;EUR_AF=0.5179;MEINFO=AluYb6_2,1,281,+;NS=2504;SAS_AF=0.6166;SITEPOST=0.9844;SVTYPE=DEL_ALU\tGT\t1|0\n6\t10070792\tDEL_pindel_18234\tTGTATTACATTTTCGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCGGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGGGACTCCGTCTCAAAAAAAAAAAAAAAAAAA\tT\t.\tPASS\tAC=3371;AF=0.673123;AFR_AF=0.711;AMR_AF=0.6787;AN=5008;CS=DEL_pindel;EAS_AF=0.7312;END=10071105;EUR_AF=0.6034;MEINFO=AluYa5,1,281,+;NS=2504;SAS_AF=0.6299;SITEPOST=0.9617;SVTYPE=DEL_ALU\tGT\t0|1\n6\t10264425\tBI_GS_DEL1_B1_P1077_251\tG\t<CN0>\t100\tPASS\tAC=2994;AF=0.597843;AFR_AF=0.2443;AMR_AF=0.7983;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.6577;END=10265263;EUR_AF=0.837;MC=SI_BD_6346;NS=2504;SAS_AF=0.6258;SVTYPE=DEL\tGT\t1|0\n6\t10293995\tDEL_pindel_18242\tACAAAGTCAACTGGAGTGGAGGACTCTAGCTGGAAAGTACATGGGAAATAACAAAGAAAAGCAGGATGGGGTCAAAAGATGAAAATCTGGAATAGCCCAGGCTATTCCAGGTCTGTAGCCCTCTCAGGTCTGCGCTCTTCTCTTTC\tA\t.\tPASS\tAC=1849;AF=0.369209;AFR_AF=0.3011;AMR_AF=0.5605;AN=5008;CS=DEL_pindel;EAS_AF=0.0962;END=10294140;EUR_AF=0.5895;NS=2504;SAS_AF=0.3804;SITEPOST=0.9992;SVTYPE=DEL\tGT\t1|0\n6\t11556091\tDEL_pindel_18277\tTAAAGACTGAGGTACAAGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCGCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAA\tT\t.\tPASS\tAC=3839;AF=0.766573;AFR_AF=0.7269;AMR_AF=0.7579;AN=5008;CS=DEL_pindel;EAS_AF=0.7708;END=11556411;EUR_AF=0.7883;MEINFO=AluY,1,281,+;NS=2504;SAS_AF=0.7996;SITEPOST=0.971;SVTYPE=DEL_ALU\tGT\t1|1\n6\t11903436\tDEL_pindel_18286\tCAAAAGTCTTTAGAGTGGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCAGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCACCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAA\tC\t.\tPASS\tAC=3152;AF=0.629393;AFR_AF=0.6732;AMR_AF=0.6499;AN=5008;CS=DEL_pindel;EAS_AF=0.5595;END=11903748;EUR_AF=0.7147;MEINFO=AluYa5,1,281,+;NS=2504;SAS_AF=0.5399;SITEPOST=0.9796;SVTYPE=DEL_ALU\tGT\t1|0\n6\t13191033\tL1_umary_LINE1_1261\tG\t<INS:ME:LINE1>\t.\t.\tAC=864;AF=0.172524;AFR_AF=0.0348;AMR_AF=0.1744;AN=5008;CS=L1_umary;EAS_AF=0.252;EUR_AF=0.2237;MEINFO=LINE1,1,6019,+;NS=2504;SAS_AF=0.2229;SITEPOST=1;SVLEN=6018;SVTYPE=LINE1;TSD=AGAATTCAAAATACAAGG\tGT\t0|1\n6\t13882549\tEM_DL_DEL10912917\tA\t<CN0>\t100\tPASS\tAC=1662;AF=0.331869;AFR_AF=0.0416;AMR_AF=0.5231;AN=5008;CIEND=-150,150;CIPOS=-150,150;CS=DEL_union;EAS_AF=0.3373;END=13883852;EUR_AF=0.4095;MC=YL_CN_FIN_1294,YL_CN_BEB_1191,YL_CN_GBR_1335,YL_CN_MXL_1161,YL_CN_GIH_1075,YL_CN_CEU_1730,YL_CN_IBS_1208,YL_CN_STU_1359;NS=2504;SAS_AF=0.5031;SVTYPE=DEL\tGT\t0|1\n6\t14745282\tBI_GS_DEL1_B5_P1081_1036\tC\t<CN0>\t100\tPASS\tAC=3843;AF=0.767372;AFR_AF=0.4697;AMR_AF=0.7997;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.9802;END=14745689;EUR_AF=0.8569;NS=2504;SAS_AF=0.8354;SVTYPE=DEL\tGT\t1|1\n6\t15666751\tBI_GS_DEL1_B4_P1082_120\tC\t<CN0>\t100\tPASS\tAC=660;AF=0.131789;AFR_AF=0.3079;AMR_AF=0.1542;AN=5008;CIEND=-36,37;CIPOS=-36,37;CS=DEL_union;EAS_AF=0.002;END=15667661;EUR_AF=0.0915;MC=SI_BD_6379;NS=2504;SAS_AF=0.0532;SVTYPE=DEL\tGT\t1|0\n6\t17376702\tYL_CN_ASW_1448\tA\t<CN0>\t100\tPASS\tAC=479;AF=0.095647;AFR_AF=0.0809;AMR_AF=0.111;AN=5008;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0.0694;END=17381506;EUR_AF=0.1302;MC=SI_BD_6392,BI_GS_DEL1_B2_P1084_255,UW_VH_536;NS=2504;SAS_AF=0.0961;SVTYPE=DEL\tGT\t1|0\n6\t17416398\tALU_umary_ALU_4990\tT\t<INS:ME:ALU>\t.\t.\tAC=897;AF=0.179113;AFR_AF=0.0651;AMR_AF=0.245;AN=5008;CS=ALU_umary;EAS_AF=0.1101;EUR_AF=0.2714;MEINFO=AluYc1,4,281,-;NS=2504;SAS_AF=0.2628;SITEPOST=1;SVLEN=277;SVTYPE=ALU;TSD=GAGAAAACTCTTTT\tGT\t1|1\n6\t17472269\tDEL_pindel_18394\tTAATAGTGCTGAATGGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAATGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAA\tT\t.\tPASS\tAC=2612;AF=0.521565;AFR_AF=0.5802;AMR_AF=0.4265;AN=5008;CS=DEL_pindel;EAS_AF=0.6081;END=17472582;EUR_AF=0.4682;MEINFO=AluYa5,1,281,+;NS=2504;SAS_AF=0.4755;SITEPOST=0.9908;SVTYPE=DEL_ALU\tGT\t0|1\n6\t18346399\tALU_umary_ALU_4996\tT\t<INS:ME:ALU>\t.\t.\tAC=803;AF=0.160343;AFR_AF=0.177;AMR_AF=0.1441;AN=5008;CS=ALU_umary;EAS_AF=0.0536;EUR_AF=0.163;MEINFO=AluYa4_4,4,281,-;NS=2504;SAS_AF=0.2566;SITEPOST=1;SVLEN=277;SVTYPE=ALU;TSD=AGCTTAGGATTATT\tGT\t1|0\n6\t18402112\tSI_BD_6402\tA\t<CN0>\t100\tPASS\tAC=3176;AF=0.634185;AFR_AF=0.4682;AMR_AF=0.6787;AN=5008;CIEND=-63,318;CIPOS=-318,50;CS=DEL_union;EAS_AF=0.7768;END=18402924;EUR_AF=0.6302;MC=DEL_pindel_18411,EM_DL_DEL10915393;NS=2504;SAS_AF=0.684;SVTYPE=DEL\tGT\t1|1\n6\t18402131\tBI_GS_DEL1_B1_P1085_313\tT\t<CN0>\t100\tPASS\tAC=3169;AF=0.632788;AFR_AF=0.4667;AMR_AF=0.6758;AN=5008;CIEND=-29,30;CIPOS=-29,30;CS=DEL_union;EAS_AF=0.7758;END=18402447;EUR_AF=0.6282;NS=2504;SAS_AF=0.684;SVTYPE=DEL\tGT\t1|1\n6\t18943635\tDEL_pindel_18429\tAACAGGGAAACAAAAACTGTAAAAATGGATTTCACTGTGACTCACTGAATT\tA\t.\tPASS\tAC=2052;AF=0.409744;AFR_AF=0.2458;AMR_AF=0.3573;AN=5008;CS=DEL_pindel;EAS_AF=0.63;END=18943685;EUR_AF=0.4841;NS=2504;SAS_AF=0.365;SITEPOST=0.9995;SVTYPE=DEL\tGT\t1|1\n6\t19155631\tDEL_pindel_18441\tTAAGCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCAACGCCATTCTCCTGCCTCAGCCTCCCCAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC\tT\t.\tPASS\tAC=1219;AF=0.243411;AFR_AF=0.3253;AMR_AF=0.2911;AN=5008;CS=DEL_pindel;EAS_AF=0.1419;END=19155966;EUR_AF=0.1998;MEINFO=AluYb6_2,1,281,-;NS=2504;SAS_AF=0.2485;SITEPOST=0.9998;SVTYPE=DEL_ALU\tGT\t1|0\n6\t20259856\tDEL_pindel_18456\tTCCGGGTGGGCGTGGGCTCAGCGGGCCGGCACTCGGAGTGGCCGGCCGGCCCGC\tT\t.\tPASS\tAC=3617;AF=0.722244;AFR_AF=0.7118;AMR_AF=0.768;AN=5008;CS=DEL_pindel;EAS_AF=0.7252;END=20259909;EUR_AF=0.7227;NS=2504;SAS_AF=0.7004;SITEPOST=0.9976;SVTYPE=DEL\tGT\t1|1\n6\t20765366\tDEL_pindel_18474\tTGGTTACATTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC\tT\t.\tPASS\tAC=2815;AF=0.562101;AFR_AF=0.5159;AMR_AF=0.5389;AN=5008;CS=DEL_pindel;EAS_AF=0.6696;END=20765686;EUR_AF=0.4543;MEINFO=AluYa5,1,281,-;NS=2504;SAS_AF=0.6411;SITEPOST=0.9979;SVTYPE=DEL_ALU\tGT\t1|0\n6\t22227472\tDEL_pindel_18501\tTGAAAAACTTGTGGGAGGCCGAGGCATGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACGGAGCAAGACTCCGTCTCAAAAAAAAAAAAAAAAAGAAAAAAAAAGAA\tT\t.\tPASS\tAC=4577;AF=0.913938;AFR_AF=0.913;AMR_AF=0.915;AN=5008;CS=DEL_pindel;EAS_AF=0.9306;END=22227754;EUR_AF=0.8887;MEINFO=AluY,38,281,+;NS=2504;SAS_AF=0.9233;SITEPOST=0.9999;SVTYPE=DEL_ALU\tGT\t1|1\n6\t23685987\tDEL_pindel_18534\tTAAAAAAAAAACAGGAGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGCGGTGGCAGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCCGGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAACA\tT\t.\tPASS\tAC=1019;AF=0.203474;AFR_AF=0.1694;AMR_AF=0.1902;AN=5008;CS=DEL_pindel;EAS_AF=0.1786;END=23686315;EUR_AF=0.2843;MEINFO=AluYb6_2,1,281,+;NS=2504;SAS_AF=0.2014;SITEPOST=0.9999;SVTYPE=DEL_ALU\tGT\t0|1\n6\t23978361\tALU_umary_ALU_5026\tC\t<INS:ME:ALU>\t.\t.\tAC=2480;AF=0.495208;AFR_AF=0.6324;AMR_AF=0.4352;AN=5008;CS=ALU_umary;EAS_AF=0.25;EUR_AF=0.5517;MEINFO=AluUndef,3,277,+;NS=2504;SAS_AF=0.547;SITEPOST=1;SVLEN=274;SVTYPE=ALU;TSD=AAAAATGACAACCATGCC\tGT\t1|1\n6\t24811806\tYL_CN_TSI_1299\tT\t<CN0>\t100\tPASS\tAC=3797;AF=0.758187;AFR_AF=0.4796;AMR_AF=0.8401;AN=5008;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0.8879;END=24818032;EUR_AF=0.839;MC=UW_VH_544,BI_GS_DEL1_B5_P1091_972;MEINFO=LINE1,2,6019,-;NS=2504;SAS_AF=0.8599;SVTYPE=DEL_LINE1\tGT\t1|1\n6\t25529870\tDEL_pindel_18577\tTAAGAATAGGCTGCTAGAATGGCGTGAACCCGGGAAGCGGAGCTTGCCGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCCGGCCTGGGCGACAGAGCGAGACTCCGTCTCCAAAAAAAAAAAAAAAAAAAAAAAAAAAA\tT\t.\tPASS\tAC=1909;AF=0.38119;AFR_AF=0.3608;AMR_AF=0.3746;AN=5008;CS=DEL_pindel;EAS_AF=0.3978;END=25530011;EUR_AF=0.3738;MEINFO=AluYb,191,281,+;NS=2504;SAS_AF=0.4039;SITEPOST=0.9966;SVTYPE=DEL_ALU\tGT\t1|0\n6\t26678936\tDUP_gs_CNV_6_26678936_26686491\tG\t<CN0>,<CN2>,<CN3>\t.\tPASS\tAC=3,4481,0;AF=0.00059904,0.894768,0;AFR_AF=0.0023,0.6596,0;AMR_AF=0,0.9308,0;AN=5008;CS=DUP_gs;EAS_AF=0,0.9812,0;END=26686491;EUR_AF=0,0.9911,0;NS=2504;SAS_AF=0,0.999,0;SITEPOST=0.9999;SVTYPE=CNV\tGT\t2|2\n6\t26739614\tDUP_gs_CNV_6_26739614_26748928\tA\t<CN0>,<CN2>\t.\tPASS\tAC=1879,555;AF=0.3752,0.110823;AFR_AF=0.0484,0.3487;AMR_AF=0.4179,0.072;AN=5008;CS=DUP_gs;EAS_AF=0.621,0.0278;END=26748928;EUR_AF=0.3698,0.0129;NS=2504;SAS_AF=0.5389,0.0031;SITEPOST=1;SVTYPE=CNV\tGT\t0|1\n6\t28190195\tDEL_pindel_18625\tTTATTATCATCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGTCGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC\tT\t.\tPASS\tAC=2520;AF=0.503195;AFR_AF=0.7337;AMR_AF=0.4164;AN=5008;CS=DEL_pindel;EAS_AF=0.499;END=28190532;EUR_AF=0.333;MEINFO=AluYb6_2,1,281,-;NS=2504;SAS_AF=0.4325;SITEPOST=0.9923;SVTYPE=DEL_ALU\tGT\t0|1\n6\t29363897\tDEL_pindel_18637\tTATCTTCCTCTCTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCC\tT\t.\tPASS\tAC=3595;AF=0.717851;AFR_AF=0.7307;AMR_AF=0.6542;AN=5008;CS=DEL_pindel;EAS_AF=0.6825;END=29364040;EUR_AF=0.7276;MEINFO=AluYa,175,281,-;NS=2504;SAS_AF=0.772;SITEPOST=0.9885;SVTYPE=DEL_ALU\tGT\t1|0\n6\t29843522\tEM_DL_DEL82419\tC\t<CN0>\t100\tPASS\tAC=2921;AF=0.583267;AFR_AF=0.6339;AMR_AF=0.621;AN=5008;CIEND=-150,150;CIPOS=-150,150;CS=DEL_union;EAS_AF=0.4613;END=29849190;EUR_AF=0.6421;MC=YL_CN_ITU_1384,UW_VH_3984;NS=2504;SAS_AF=0.5532;SVTYPE=DEL\tGT\t1|1\n6\t29899944\tYL_CN_CEU_1759\tG\t<CN0>\t100\tPASS\tAC=4164;AF=0.83147;AFR_AF=0.8283;AMR_AF=0.8372;AN=5008;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0.8681;END=29901525;EUR_AF=0.7913;NS=2504;SAS_AF=0.8354;SVTYPE=DEL\tGT\t1|1\n6\t29998496\tALU_umary_ALU_5055\tC\t<INS:ME:ALU>\t.\t.\tAC=720;AF=0.14377;AFR_AF=0.0817;AMR_AF=0.1009;AN=5008;CS=ALU_umary;EAS_AF=0.1458;EUR_AF=0.1928;MEINFO=AluUndef,1,228,+;NS=2504;SAS_AF=0.2055;SITEPOST=1;SVLEN=227;SVTYPE=ALU;TSD=AAAAAAACTTCTTTC\tGT\t1|0\n6\t30207801\tBI_GS_DEL1_B3_P1097_6\tA\t<CN0>\t100\tPASS\tAC=1511;AF=0.301717;AFR_AF=0.3593;AMR_AF=0.3718;AN=5008;CIEND=-5,6;CIPOS=-5,6;CS=DEL_union;EAS_AF=0.2619;END=30208224;EUR_AF=0.3241;NS=2504;SAS_AF=0.1922;SVTYPE=DEL\tGT\t0|1\n6\t30230519\tDEL_pindel_18656\tTTTTTTTTCAACAGAGGTGAGGCTGGGACATTTCTATTCATGTCTTAACTTTTAAGTTTCACTGAGCTGCCAC\tT\t.\tPASS\tAC=411;AF=0.0820687;AFR_AF=0.1104;AMR_AF=0.062;AN=5008;CS=DEL_pindel;EAS_AF=0.0496;END=30230591;EUR_AF=0.1123;NS=2504;SAS_AF=0.0603;SITEPOST=0.9999;SVTYPE=DEL\tGT\t1|0\n6\t30886430\tDEL_pindel_18661\tAACCCTGGGTTCCTATAAACACTGCTCCTACTTTTTTCTAGTCACTCCTGGGGGCCTCTTCCACCTTGACTACTCCCTGCCCCTTCCCCTTTCCAGTTCTACTGCCTTTAGCTATGTTGGCAGTGAGAGGTGAGGATGATG\tA\t.\tPASS\tAC=189;AF=0.0377396;AFR_AF=0.0318;AMR_AF=0.0231;AN=5008;CS=DEL_pindel;EAS_AF=0.0169;END=30886570;EUR_AF=0.0736;NS=2504;SAS_AF=0.0409;SITEPOST=0.9983;SVTYPE=DEL\tGT\t1|0\n6\t31292091\tBI_GS_DEL1_B2_P1098_218\tG\t<CN0>\t100\tPASS\tAC=3151;AF=0.629193;AFR_AF=0.7587;AMR_AF=0.5317;AN=5008;CIEND=-54,55;CIPOS=-54,55;CS=DEL_union;EAS_AF=0.495;END=31293878;EUR_AF=0.6372;MC=YL_CN_KHV_1438,YL_CN_YRI_1810,EM_DL_DEL10921745,YL_CN_LWK_1353,YL_CN_GBR_1367,SI_BD_6482,YL_CN_PJL_1447,YL_CN_STU_1388;NS=2504;SAS_AF=0.6534;SVTYPE=DEL\tGT\t1|1\n6\t32313768\tDEL_pindel_18709\tTGTCATATCCTCATTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCCGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGTGCCCGCCACAGCGCTCGGCTAATTTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC\tT\t.\tPASS\tAC=3092;AF=0.617412;AFR_AF=0.5681;AMR_AF=0.6196;AN=5008;CS=DEL_pindel;EAS_AF=0.6369;END=32314091;EUR_AF=0.6153;MEINFO=AluYb6_2,1,281,-;NS=2504;SAS_AF=0.6646;SITEPOST=0.9919;SVTYPE=DEL_ALU\tGT\t1|0\n6\t32454946\tBI_GS_DEL1_B4_P1099_107\tT\t<CN0>\t100\tPASS\tAC=4144;AF=0.827476;AFR_AF=0.8608;AMR_AF=0.9006;AN=5008;CIEND=-62,63;CIPOS=-62,63;CS=DEL_union;EAS_AF=0.7887;END=32478407;EUR_AF=0.8598;NS=2504;SAS_AF=0.7372;SVTYPE=DEL\tGT\t1|1\n6\t32461337\tBI_GS_DEL1_B2_P1099_323\tG\t<CN0>\t100\tPASS\tAC=4147;AF=0.828075;AFR_AF=0.8608;AMR_AF=0.9006;AN=5008;CIEND=-62,62;CIPOS=-62,62;CS=DEL_union;EAS_AF=0.7887;END=32468848;EUR_AF=0.8628;MC=EM_DL_DEL82968;NS=2504;SAS_AF=0.7372;SVTYPE=DEL\tGT\t1|1\n6\t32494142\tSI_BD_6494\tT\t<CN0>\t100\tPASS\tAC=3617;AF=0.722244;AFR_AF=0.7738;AMR_AF=0.8256;AN=5008;CIEND=-50,126;CIPOS=-126,50;CS=DEL_union;EAS_AF=0.6687;END=32494484;EUR_AF=0.7694;NS=2504;SAS_AF=0.5859;SVTYPE=DEL\tGT\t1|1\n6\t32499300\tBI_GS_DEL1_B3_P1099_31\tA\t<CN0>\t100\tPASS\tAC=4057;AF=0.810104;AFR_AF=0.8374;AMR_AF=0.889;AN=5008;CIEND=0,1;CIPOS=0,1;CS=DEL_union;EAS_AF=0.7728;END=32500806;EUR_AF=0.8459;MC=YL_CN_YRI_1822,YL_CN_CEU_1776,YL_CN_GWD_1950,YL_CN_CHB_1435,YL_CN_CLM_1212,YL_CN_FIN_1333,YL_CN_JPT_1552,YL_CN_CHS_1427,YL_CN_GBR_1379,YL_CN_MXL_1198,SI_BD_6495,YL_CN_ASW_1480,YL_CN_GIH_1109,YL_CN_PEL_1268;NS=2504;SAS_AF=0.7188;SVTYPE=DEL\tGT\t1|1\n6\t32512660\tBI_GS_DEL1_B1_P1099_367\tT\t<CN0>\t100\tPASS\tAC=3494;AF=0.697684;AFR_AF=0.7231;AMR_AF=0.7334;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.7252;END=32513019;EUR_AF=0.6759;NS=2504;SAS_AF=0.6319;SVTYPE=DEL\tGT\t1|1\n6\t32514808\tEM_DL_DEL10922561\tT\t<CN0>\t100\tPASS\tAC=4065;AF=0.811701;AFR_AF=0.8464;AMR_AF=0.8847;AN=5008;CIEND=-150,150;CIPOS=-150,150;CS=DEL_union;EAS_AF=0.7738;END=32516265;EUR_AF=0.8419;MC=SI_BD_6497,BI_GS_DEL1_B1_P1099_369,YL_CN_GBR_1381,YL_CN_ESN_1483;NS=2504;SAS_AF=0.7209;SVTYPE=DEL\tGT\t1|1\n6\t32571334\tBI_GS_DEL1_B4_P1099_131\tA\t<CN0>\t100\tPASS\tAC=3648;AF=0.728435;AFR_AF=0.77;AMR_AF=0.7565;AN=5008;CIEND=0,1;CIPOS=0,1;CS=DEL_union;EAS_AF=0.746;END=32571609;EUR_AF=0.669;MEINFO=AluY,1,281,+;NS=2504;SAS_AF=0.6953;SVTYPE=DEL_ALU\tGT\t1|1\n6\t32604936\tDUP_gs_CNV_6_32604936_32616132\tA\t<CN0>,<CN2>\t.\tPASS\tAC=1897,1605;AF=0.378794,0.320487;AFR_AF=0.354,0.3396;AMR_AF=0.4337,0.2248;AN=5008;CS=DUP_gs;EAS_AF=0.3929,0.3492;END=32616132;EUR_AF=0.4056,0.3171;NS=2504;SAS_AF=0.3313,0.3364;SITEPOST=0.9966;SVTYPE=CNV\tGT\t1|0\n6\t32614932\tBI_GS_DEL1_B5_P1099_522\tG\t<CN0>\t100\tPASS\tAC=2504;AF=0.5;AFR_AF=0.4516;AMR_AF=0.6614;AN=5008;CIEND=-21,21;CIPOS=-21,21;CS=DEL_union;EAS_AF=0.4742;END=32615252;EUR_AF=0.5408;MC=SI_BD_6507;NS=2504;SAS_AF=0.4356;SVTYPE=DEL\tGT\t1|1\n6\t32623533\tBI_GS_DEL1_B1_P1099_422\tA\t<CN0>\t100\tPASS\tAC=2775;AF=0.554113;AFR_AF=0.5076;AMR_AF=0.7075;AN=5008;CIEND=-14,14;CIPOS=-14,14;CS=DEL_union;EAS_AF=0.5427;END=32624604;EUR_AF=0.5885;NS=2504;SAS_AF=0.4847;SVTYPE=DEL\tGT\t1|1\n6\t32624896\tBI_GS_DEL1_B5_P1099_530\tA\t<CN0>\t100\tPASS\tAC=2775;AF=0.554113;AFR_AF=0.5083;AMR_AF=0.7089;AN=5008;CIEND=-2,3;CIPOS=-2,3;CS=DEL_union;EAS_AF=0.5357;END=32625863;EUR_AF=0.5905;MC=SI_BD_6508,EM_DL_DEL10923034;NS=2504;SAS_AF=0.4877;SVTYPE=DEL\tGT\t1|1\n6\t32676558\tUW_VH_549\tC\t<CN0>\t100\tPASS\tAC=3649;AF=0.728634;AFR_AF=0.671;AMR_AF=0.7911;AN=5008;CIEND=0,435;CIPOS=-460,0;CS=DEL_union;EAS_AF=0.8135;END=32677026;EUR_AF=0.6521;NS=2504;SAS_AF=0.7536;SVTYPE=DEL\tGT\t0|1\n6\t32778682\tUW_VH_5456\tC\t<CN0>\t100\tPASS\tAC=3231;AF=0.645168;AFR_AF=0.5053;AMR_AF=0.5951;AN=5008;CIEND=0,473;CIPOS=-384,0;CS=DEL_union;EAS_AF=0.6845;END=32779821;EUR_AF=0.669;MC=EM_DL_DEL10924276,YL_CN_CEU_1788,YL_CN_CHS_1442,YL_CN_STU_1420,YL_CN_BEB_1246,YL_CN_ITU_1421,YL_CN_JPT_1566,YL_CN_PEL_1279,YL_CN_GWD_1968,YL_CN_PUR_1713,YL_CN_PJL_1475,SI_BD_6511,YL_CN_KHV_1465;NS=2504;SAS_AF=0.8047;SVTYPE=DEL\tGT\t1|0\n6\t33026721\tBI_GS_DEL1_B2_P1100_23\tT\t<CN0>\t100\tPASS\tAC=2225;AF=0.444289;AFR_AF=0.5877;AMR_AF=0.2853;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.6806;END=33028605;EUR_AF=0.1889;MC=UW_VH_5573,YL_CN_ASW_1493;NS=2504;SAS_AF=0.3824;SVTYPE=DEL\tGT\t1|0\n6\t33030313\tSVA_umary_SVA_282\tT\t<INS:ME:SVA>\t.\t.\tAC=1692;AF=0.337859;AFR_AF=0.4115;AMR_AF=0.2305;AN=5008;CS=SVA_umary;EAS_AF=0.5694;EUR_AF=0.1551;MEINFO=SVA,133,1627,-;NS=2504;SAS_AF=0.2638;SITEPOST=1;SVLEN=1494;SVTYPE=SVA;TSD=CTCTTTTTCTT\tGT\t1|0\n6\t33093407\tDEL_pindel_18722\tTAAAATGACAAGGCTGGAGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGCGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAGCCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCCGGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAA\tT\t.\tPASS\tAC=1984;AF=0.396166;AFR_AF=0.2269;AMR_AF=0.3573;AN=5008;CS=DEL_pindel;EAS_AF=0.4355;END=33093738;EUR_AF=0.4145;MEINFO=AluYb5,1,281,+;NS=2504;SAS_AF=0.593;SITEPOST=0.9993;SVTYPE=DEL_ALU\tGT\t0|1\n6\t33583080\tYL_CN_ASW_1494\tG\t<CN0>\t100\tPASS\tAC=1965;AF=0.392372;AFR_AF=0.4062;AMR_AF=0.2493;AN=5008;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0.5337;END=33585984;EUR_AF=0.2396;MC=BI_GS_DEL1_B5_P1100_547,SI_BD_6521,EM_DL_DEL83318,UW_VH_2796;NS=2504;SAS_AF=0.4867;SVTYPE=DEL\tGT\t1|0\n6\t34699946\tBI_GS_DEL1_B1_P1101_535\tA\t<CN0>\t100\tPASS\tAC=2321;AF=0.463458;AFR_AF=0.7685;AMR_AF=0.3127;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.4573;END=34701100;EUR_AF=0.338;MC=SI_BD_6536,EM_DL_DEL10925086,YL_CN_PUR_1725;NS=2504;SAS_AF=0.2935;SVTYPE=DEL\tGT\t0|1\n6\t35626431\tBI_GS_DEL1_B5_P1102_679\tG\t<CN0>\t100\tPASS\tAC=3188;AF=0.636581;AFR_AF=0.5446;AMR_AF=0.6383;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.6895;END=35629746;EUR_AF=0.67;MC=SI_BD_6541,UW_VH_550,EM_DL_DEL83370,YL_CN_MXL_1215;NS=2504;SAS_AF=0.6708;SVTYPE=DEL\tGT\t1|0\n6\t35649830\tDEL_pindel_18764\tATGTAAATTACCCTGTTAGGTTTCAATGAAACACCTTTTCTCTTGTAACAAACATCTCCTCCAAGCTAGAATTTCAAAACAG\tA\t.\tPASS\tAC=407;AF=0.08127;AFR_AF=0.2179;AMR_AF=0.0836;AN=5008;CS=DEL_pindel;EAS_AF=0.0417;END=35649911;EUR_AF=0.0149;NS=2504;SAS_AF=0.0041;SITEPOST=0.9995;SVTYPE=DEL\tGT\t0|1\n6\t35754684\tDUP_gs_CNV_6_35754684_35766728\tG\t<CN2>,<CN3>\t.\tPASS\tAC=2161,114;AF=0.43151,0.0227636;AFR_AF=0.4758,0.0401;AMR_AF=0.3963,0.0202;AN=5008;CS=DUP_gs;EAS_AF=0.3502,0.0169;END=35766728;EUR_AF=0.4911,0.0189;NS=2504;SAS_AF=0.4192,0.0112;SITEPOST=1;SVTYPE=CNV\tGT\t0|1\n6\t38071246\tDEL_pindel_18811\tTATATATATACACACATATATACACGTGTATATATATACACGTGTATATATACAC\tT\t.\tPASS\tAC=1537;AF=0.306909;AFR_AF=0.2958;AMR_AF=0.3746;AN=5008;CS=DEL_pindel;EAS_AF=0.2173;END=38071300;EUR_AF=0.3678;NS=2504;SAS_AF=0.3037;SITEPOST=0.9906;SVTYPE=DEL\tGT\t1|0\n6\t38498278\tDEL_pindel_18824\tTGGCCCAACTGTAAAATTCCTCTCTTTGTACTGTCTCTGTTTATTTCTCAGCTGGCCGACACTTATGGAAAATAGAAAGAACCTACATTGAAATATTGGGGGTGGGTTCCCCCAATACTCACAAAACAAACTAAATAA\tT\t.\tPASS\tAC=504;AF=0.100639;AFR_AF=0.0651;AMR_AF=0.1398;AN=5008;CS=DEL_pindel;EAS_AF=0.0228;END=38498415;EUR_AF=0.1988;NS=2504;SAS_AF=0.1002;SITEPOST=0.9986;SVTYPE=DEL\tGT\t1|0\n6\t38922187\tDEL_pindel_18831\tTAATAAATTACAGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGACGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACACGGTGAAACCCCGTCTCTACTAAAAATACAAAAATTAGCCGGGCATGGTGGCGCGCGCCTGTAGTCCCAGCTACACGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGTCGAGATCGCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAAACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAA\tT\t.\tPASS\tAC=4054;AF=0.809505;AFR_AF=0.8306;AMR_AF=0.7464;AN=5008;CS=DEL_pindel;EAS_AF=0.8869;END=38922502;EUR_AF=0.7843;MEINFO=AluYg6,1,281,+;NS=2504;SAS_AF=0.772;SITEPOST=0.99065;SVTYPE=DEL_ALU\tGT\t1|1\n6\t41953350\tDEL_pindel_18863\tGCCAGTTTAAGTCTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGGTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGC\tG\t.\tPASS\tAC=4099;AF=0.81849;AFR_AF=0.8147;AMR_AF=0.8458;AN=5008;CS=DEL_pindel;EAS_AF=0.8194;END=41953665;EUR_AF=0.7863;MEINFO=AluYa5,2,281,-;NS=2504;SAS_AF=0.8364;SITEPOST=0.9514;SVTYPE=DEL_ALU\tGT\t1|1\n6\t47312788\tALU_umary_ALU_5141\tC\t<INS:ME:ALU>\t.\t.\tAC=923;AF=0.184305;AFR_AF=0.1233;AMR_AF=0.1527;AN=5008;CS=ALU_umary;EAS_AF=0.2004;EUR_AF=0.2435;MEINFO=AluUndef,1,281,-;NS=2504;SAS_AF=0.2117;SITEPOST=1;SVLEN=280;SVTYPE=ALU;TSD=AAATAAAGAGCCCCTGC\tGT\t1|1\n6\t47564668\tUW_VH_3206\tA\t<CN0>\t100\tPASS\tAC=106;AF=0.0211661;AFR_AF=0.0038;AMR_AF=0.0274;AN=5008;CIEND=0,304;CIPOS=-290,0;CS=DEL_union;EAS_AF=0.001;END=47566948;EUR_AF=0.0596;MC=BI_GS_DEL1_B5_P1114_685,SI_BD_6593,YL_CN_STU_1436,EM_DL_DEL83560;NS=2504;SAS_AF=0.0215;SVTYPE=DEL\tGT\t0|1\n6\t48286295\tDEL_pindel_18995\tCTGATAGTATGTATCAGTTTATTTTTTATTCTAAAATCACAATTTGCTTCTTGCT\tC\t.\tPASS\tAC=111;AF=0.0221645;AFR_AF=0.0129;AMR_AF=0.0101;AN=5008;CS=DEL_pindel;EAS_AF=0.0327;END=48286349;EUR_AF=0.0159;NS=2504;SAS_AF=0.0389;SITEPOST=0.9996;SVTYPE=DEL\tGT\t0|1\n6\t50765956\tDEL_pindel_19061\tTAAGAATAGGTTTAACGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCGCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAA\tT\t.\tPASS\tAC=2035;AF=0.40635;AFR_AF=0.4909;AMR_AF=0.3458;AN=5008;CS=DEL_pindel;EAS_AF=0.3651;END=50766267;EUR_AF=0.4592;MEINFO=AluYa1_1,1,281,+;NS=2504;SAS_AF=0.3231;SITEPOST=0.9996;SVTYPE=DEL_ALU\tGT\t0|1\n6\t51300093\tALU_umary_ALU_5167\tC\t<INS:ME:ALU>\t.\t.\tAC=162;AF=0.0323482;AFR_AF=0.034;AMR_AF=0.0389;AN=5008;CS=ALU_umary;EAS_AF=0;EUR_AF=0.0825;MEINFO=AluUndef,5,280,+;NS=2504;SAS_AF=0.0072;SITEPOST=1;SVLEN=275;SVTYPE=ALU;TSD=AATAATTTATATTTTC\tGT\t0|1\n6\t51517349\tDEL_pindel_19080\tTTATCTCTCTTGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC\tT\t.\tPASS\tAC=3798;AF=0.758387;AFR_AF=0.7632;AMR_AF=0.7493;AN=5008;CS=DEL_pindel;EAS_AF=0.7917;END=51517675;EUR_AF=0.7266;MEINFO=AluYa5,1,281,-;NS=2504;SAS_AF=0.7566;SITEPOST=0.9664;SVTYPE=DEL_ALU\tGT\t0|1\n6\t51736109\tBI_GS_DEL1_B3_P1118_37\tA\t<CN0>\t100\tPASS\tAC=1454;AF=0.290335;AFR_AF=0.23;AMR_AF=0.3199;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.0714;END=51736805;EUR_AF=0.5318;MC=SI_BD_6615,DEL_pindel_19087,UW_VH_555;NS=2504;SAS_AF=0.3282;SVTYPE=DEL\tGT\t1|1\n6\t51929672\tALU_umary_ALU_5171\tA\t<INS:ME:ALU>\t.\t.\tAC=1517;AF=0.302915;AFR_AF=0.3585;AMR_AF=0.2046;AN=5008;CS=ALU_umary;EAS_AF=0.3581;EUR_AF=0.2117;MEINFO=AluUndef,1,263,-;NS=2504;SAS_AF=0.3344;SITEPOST=1;SVLEN=262;SVTYPE=ALU;TSD=null\tGT\t0|1\n6\t52691458\tALU_umary_ALU_5178\tG\t<INS:ME:ALU>\t.\t.\tAC=1804;AF=0.360224;AFR_AF=0.292;AMR_AF=0.3372;AN=5008;CS=ALU_umary;EAS_AF=0.4187;EUR_AF=0.4115;MEINFO=AluUndef,45,253,-;NS=2504;SAS_AF=0.3558;SITEPOST=1;SVLEN=208;SVTYPE=ALU;TSD=null\tGT\t0|1\n6\t53648758\tALU_umary_ALU_5184\tA\t<INS:ME:ALU>\t.\t.\tAC=1919;AF=0.383187;AFR_AF=0.2655;AMR_AF=0.3919;AN=5008;CS=ALU_umary;EAS_AF=0.5536;EUR_AF=0.3419;MEINFO=AluYa5,1,281,+;NS=2504;SAS_AF=0.4029;SITEPOST=1;SVLEN=280;SVTYPE=ALU;TSD=AAAAGGCATATAAA\tGT\t1|0\n6\t53928702\tUW_VH_1777\tT\t<CN0>\t100\tPASS\tAC=2137;AF=0.426717;AFR_AF=0.0825;AMR_AF=0.4654;AN=5008;CIEND=0,397;CIPOS=-321,0;CS=DEL_union;EAS_AF=0.5079;END=53934820;EUR_AF=0.673;MC=BI_GS_DEL1_B1_P1120_858,YL_CN_FIN_1359,EM_DL_DEL83955;NS=2504;SAS_AF=0.5276;SVTYPE=DEL\tGT\t0|1\n6\t54556435\tDEL_pindel_19146\tTAAAAGAATGTCCCAGGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA\tT\t.\tPASS\tAC=3761;AF=0.750998;AFR_AF=0.7451;AMR_AF=0.7219;AN=5008;CS=DEL_pindel;EAS_AF=0.7302;END=54556770;EUR_AF=0.7773;MEINFO=AluYa3_4,1,281,+;NS=2504;SAS_AF=0.774;SITEPOST=0.9567;SVTYPE=DEL_ALU\tGT\t1|0\n6\t54846372\tUW_VH_2304\tA\t<CN0>\t100\tPASS\tAC=148;AF=0.0295527;AFR_AF=0.0219;AMR_AF=0.0389;AN=5008;CIEND=0,385;CIPOS=-363,0;CS=DEL_union;EAS_AF=0;END=54851449;EUR_AF=0.0557;MC=BI_GS_DEL1_B1_P1121_666,SI_BD_6644,YL_CN_GIH_1130,EM_DL_DEL84222;NS=2504;SAS_AF=0.0368;SVTYPE=DEL\tGT\t0|1\n6\t57268496\tDUP_gs_CNV_6_57268496_57297686\tT\t<CN2>,<CN3>\t.\tPASS\tAC=5003,4;AF=0.999002,0.00079872;AFR_AF=0.9985,0.0015;AMR_AF=0.9971,0.0014;AN=5008;CS=DUP_gs;EAS_AF=1,0;END=57297686;EUR_AF=0.999,0.001;NS=2504;SAS_AF=1,0;SITEPOST=1;SVTYPE=CNV\tGT\t1|1\n6\t57450653\tDUP_gs_CNV_6_57450653_57479094\tT\t<CN2>,<CN3>\t.\tPASS\tAC=4997,5;AF=0.997804,0.0009984;AFR_AF=0.9939,0.0023;AMR_AF=0.9986,0;AN=5008;CS=DUP_gs;EAS_AF=1,0;END=57479094;EUR_AF=0.998,0.002;NS=2504;SAS_AF=1,0;SITEPOST=1;SVTYPE=CNV\tGT\t1|1\n6\t57733728\tDEL_pindel_19172\tCTTGGAAGAACTGCTCAGCCATCCACAATTATTGATTGCTTCCTCTGTGTACAGCACCGTGAAAGCAGCTGAGGGACAAAAAGAAGTATAAAACCTA\tC\t.\tPASS\tAC=576;AF=0.115016;AFR_AF=0.2466;AMR_AF=0.1081;AN=5008;CS=DEL_pindel;EAS_AF=0.0288;END=57733824;EUR_AF=0.0905;NS=2504;SAS_AF=0.0562;SITEPOST=0.9255;SVTYPE=DEL\tGT\t1|0\n6\t62924290\tBI_GS_DEL1_B3_P1129_39\tA\t<CN0>\t100\tPASS\tAC=48;AF=0.00958466;AFR_AF=0.0008;AMR_AF=0.013;AN=5008;CIEND=-21,21;CIPOS=-21,21;CS=DEL_union;EAS_AF=0;END=62929121;EUR_AF=0.0328;MC=YL_CN_IBS_1292,UW_VH_2305;NS=2504;SAS_AF=0.0051;SVTYPE=DEL\tGT\t0|1\n6\t63597637\tBI_GS_DEL1_B5_P1130_581\tT\t<CN0>\t100\tPASS\tAC=864;AF=0.172524;AFR_AF=0.0295;AMR_AF=0.2032;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.2679;END=63598983;EUR_AF=0.2286;MC=YL_CN_BEB_1282,EM_DL_DEL10935626,SI_BD_6687,UW_VH_1462,YL_CN_TSI_1387,YL_CN_ITU_1460;NS=2504;SAS_AF=0.1881;SVTYPE=DEL\tGT\t1|0\n6\t64666468\tBI_GS_DEL1_B2_P1131_397\tC\t<CN0>\t100\tPASS\tAC=536;AF=0.107029;AFR_AF=0.0106;AMR_AF=0.2363;AN=5008;CIEND=-22,23;CIPOS=-22,23;CS=DEL_union;EAS_AF=0.0675;END=64668402;EUR_AF=0.1879;NS=2504;SAS_AF=0.1033;SVTYPE=DEL\tGT\t1|0\n6\t64667011\tBI_GS_DEL1_B2_P1131_400\tA\t<CN0>\t100\tPASS\tAC=893;AF=0.178315;AFR_AF=0.0129;AMR_AF=0.366;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.1587;END=64668349;EUR_AF=0.2773;MC=EM_DL_DEL10935933,YL_CN_ITU_1463,YL_CN_CEU_1836;NS=2504;SAS_AF=0.1871;SVTYPE=DEL\tGT\t1|0\n6\t65006421\tDEL_pindel_19218\tATTGTACTGGCAGAATATATATATATATATATATATATATATATATATATATATATACATATATATATATATTTTTTTTTTTTTTTTTTTTTTTT\tA\t.\tPASS\tAC=3620;AF=0.722843;AFR_AF=0.612;AMR_AF=0.7522;AN=5008;CS=DEL_pindel;EAS_AF=0.6875;END=65006515;EUR_AF=0.7942;NS=2504;SAS_AF=0.8149;SITEPOST=0.98835;SVTYPE=DEL\tGT\t1|0\n6\t65710974\tBI_GS_DEL1_B2_P1132_466\tG\t<CN0>\t100\tPASS\tAC=614;AF=0.122604;AFR_AF=0.0068;AMR_AF=0.111;AN=5008;CIEND=-2,2;CIPOS=-2,2;CS=DEL_union;EAS_AF=0.2242;END=65715701;EUR_AF=0.163;MC=EM_DL_DEL84741,YL_CN_GBR_1428,UW_VH_2721,UW_VH_560,UW_VH_11572;NS=2504;SAS_AF=0.1411;SVTYPE=DEL\tGT\t1|1\n6\t66163982\tALU_umary_ALU_5227\tT\t<INS:ME:ALU>\t.\t.\tAC=874;AF=0.174521;AFR_AF=0.0946;AMR_AF=0.1945;AN=5008;CS=ALU_umary;EAS_AF=0.1954;EUR_AF=0.2177;MEINFO=AluUndef,1,281,-;NS=2504;SAS_AF=0.2025;SITEPOST=1;SVLEN=280;SVTYPE=ALU;TSD=CTATTTTTCATTTTTT\tGT\t0|1\n6\t66260136\tSI_BD_6703\tC\t<CN0>\t100\tPASS\tAC=4104;AF=0.819489;AFR_AF=0.9463;AMR_AF=0.804;AN=5008;CIEND=-86,99;CIPOS=-99,50;CS=DEL_union;EAS_AF=0.8393;END=66262101;EUR_AF=0.673;NS=2504;SAS_AF=0.7894;SVTYPE=DEL\tGT\t0|1\n6\t67009228\tYL_CN_PJL_1528\tA\t<CN0>\t100\tPASS\tAC=156;AF=0.0311502;AFR_AF=0.0023;AMR_AF=0.0519;AN=5008;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0;END=67049033;EUR_AF=0.0755;MC=DUP_uwash_chr6_67008487_67049415,UW_VH_9113,BI_GS_DEL1_B2_P1134_7,UW_VH_3461,UW_VH_23908;NS=2504;SAS_AF=0.0419;SVTYPE=DEL\tGT\t0|1\n6\t67024956\tBI_GS_DEL1_B5_P1134_20\tT\t<CN0>\t100\tPASS\tAC=163;AF=0.0325479;AFR_AF=0.0182;AMR_AF=0.0504;AN=5008;CIEND=-1,1;CIPOS=-1,1;CS=DEL_union;EAS_AF=0;END=67027285;EUR_AF=0.0666;MC=UW_VH_12464,SI_BD_6710;NS=2504;SAS_AF=0.0378;SVTYPE=DEL\tGT\t1|0\n6\t67040806\tUW_VH_13167\tC\t<CN0>\t100\tPASS\tAC=977;AF=0.195088;AFR_AF=0.1725;AMR_AF=0.2176;AN=5008;CIEND=0,353;CIPOS=-393,0;CS=DEL_union;EAS_AF=0.1756;END=67043182;EUR_AF=0.2565;MC=BI_GS_DEL1_B2_P1134_25,YL_CN_GWD_2042,YL_CN_CHB_1498,YL_CN_CEU_1842,UW_VH_6172,UW_VH_1778,YL_CN_CLM_1271,SI_BD_6711;NS=2504;SAS_AF=0.1667;SVTYPE=DEL\tGT\t0|1\n6\t68311311\tALU_umary_ALU_5237\tT\t<INS:ME:ALU>\t.\t.\tAC=2548;AF=0.508786;AFR_AF=0.4455;AMR_AF=0.4697;AN=5008;CS=ALU_umary;EAS_AF=0.6508;EUR_AF=0.502;MEINFO=AluUndef,1,281,-;NS=2504;SAS_AF=0.4826;SITEPOST=1;SVLEN=280;SVTYPE=ALU;TSD=TTTTTGCCAGTATTTT\tGT\t1|1\n6\t68314068\tALU_umary_ALU_5238\tT\t<INS:ME:ALU>\t.\t.\tAC=2808;AF=0.560703;AFR_AF=0.5197;AMR_AF=0.5648;AN=5008;CS=ALU_umary;EAS_AF=0.5863;EUR_AF=0.5547;MEINFO=AluYa5,1,281,-;NS=2504;SAS_AF=0.593;SITEPOST=1;SVLEN=280;SVTYPE=ALU;TSD=TGATTTGGTATATACATTT\tGT\t0|1\n6\t70190684\tUW_VH_563\tC\t<CN0>\t100\tPASS\tAC=1394;AF=0.278355;AFR_AF=0.0643;AMR_AF=0.3199;AN=5008;CIEND=0,441;CIPOS=-413,0;CS=DEL_union;EAS_AF=0.3442;END=70192285;EUR_AF=0.3598;MC=YL_CN_GBR_1431,BI_GS_DEL1_B2_P1137_136,SI_BD_6739,YL_CN_TSI_1397,YL_CN_ITU_1470;NS=2504;SAS_AF=0.3865;SVTYPE=DEL\tGT\t1|0\n6\t72863591\tYL_CN_STU_1469\tC\t<CN0>\t100\tPASS\tAC=882;AF=0.176118;AFR_AF=0.0393;AMR_AF=0.2205;AN=5008;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0.1677;END=72873663;EUR_AF=0.2644;MC=SI_BD_6758,UW_VH_21097,UW_VH_1463,YL_CN_MSL_1403,BI_GS_DEL1_B1_P1139_754,EM_DL_DEL85153,UW_VH_12504;NS=2504;SAS_AF=0.2474;SVTYPE=DEL\tGT\t0|1\n6\t73221994\tUW_VH_2059\tT\t<CN0>\t100\tPASS\tAC=344;AF=0.0686901;AFR_AF=0.0098;AMR_AF=0.0879;AN=5008;CIEND=0,347;CIPOS=-516,0;CS=DEL_union;EAS_AF=0.0089;END=73222816;EUR_AF=0.164;MC=BI_GS_DEL1_B4_P1140_53,EM_DL_DEL10939082;NS=2504;SAS_AF=0.0982;SVTYPE=DEL\tGT\t0|1\n6\t74156152\tDEL_pindel_19403\tGAAAAAAAAAAATCGGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAATACAAAAAAAAATTAGCCGGGCGCGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCCCGCCGGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAA\tG\t.\tPASS\tAC=1350;AF=0.269569;AFR_AF=0.3283;AMR_AF=0.1988;AN=5008;CS=DEL_pindel;EAS_AF=0.252;END=74156478;EUR_AF=0.2217;MEINFO=AluYb6_2,1,281,+;NS=2504;SAS_AF=0.3078;SITEPOST=0.9901;SVTYPE=DEL_ALU\tGT\t0|1\n6\t74421253\tDEL_pindel_19414\tTTAAGTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCTTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC\tT\t.\tPASS\tAC=3198;AF=0.638578;AFR_AF=0.6067;AMR_AF=0.7061;AN=5008;CS=DEL_pindel;EAS_AF=0.5238;END=74421559;EUR_AF=0.7873;MEINFO=AluYa5,1,281,-;NS=2504;SAS_AF=0.5992;SITEPOST=0.9917;SVTYPE=DEL_ALU\tGT\t1|1\n6\t74504855\tALU_umary_ALU_5280\tG\t<INS:ME:ALU>\t.\t.\tAC=1985;AF=0.396366;AFR_AF=0.4871;AMR_AF=0.3862;AN=5008;CS=ALU_umary;EAS_AF=0.4127;EUR_AF=0.3907;MEINFO=AluUndef,1,281,+;NS=2504;SAS_AF=0.2699;SITEPOST=1;SVLEN=280;SVTYPE=ALU;TSD=AAGATTTAGTTTTTCTGG\tGT\t1|0\n6\t74591999\tDUP_gs_CNV_6_74591999_74602382\tG\t<CN0>,<CN2>\t.\tPASS\tAC=1576,1;AF=0.314696,0.00019968;AFR_AF=0.1823,0.0008;AMR_AF=0.3804,0;AN=5008;CS=DUP_gs;EAS_AF=0.3294,0;END=74602382;EUR_AF=0.3668,0;MC=UW_VH_12445,UW_VH_10874,SI_BD_6770,UW_VH_10975,UW_VH_21110,UW_VH_12927,UW_VH_6209,EM_DL_DEL85185,YL_CN_LWK_1431,UW_VH_2179,BI_GS_DEL1_B1_P1141_389;NS=2504;SAS_AF=0.3783,0;SITEPOST=1;SVTYPE=CNV\tGT\t1|0\n6\t74613607\tUW_VH_20\tC\t<CN0>\t100\tPASS\tAC=699;AF=0.139577;AFR_AF=0.0688;AMR_AF=0.1599;AN=5008;CIEND=0,453;CIPOS=-574,0;CS=DEL_union;EAS_AF=0.0794;END=74620405;EUR_AF=0.2694;MC=YL_CN_BEB_1296,BI_GS_DEL1_B1_P1141_403,EM_DL_DEL85192;NS=2504;SAS_AF=0.1493;SVTYPE=DEL\tGT\t0|1\n6\t74832472\tUW_VH_2590\tT\t<CN0>\t100\tPASS\tAC=121;AF=0.0241613;AFR_AF=0.0015;AMR_AF=0.0375;AN=5008;CIEND=0,347;CIPOS=-434,0;CS=DEL_union;EAS_AF=0.0079;END=74833461;EUR_AF=0.0646;MC=DEL_pindel_19427,BI_GS_DEL1_B5_P1141_831,SI_BD_6773;NS=2504;SAS_AF=0.0204;SVTYPE=DEL\tGT\t0|1\n6\t74932705\tUW_VH_25122\tC\t<CN0>\t100\tPASS\tAC=2284;AF=0.45607;AFR_AF=0.2231;AMR_AF=0.5014;AN=5008;CIEND=0,416;CIPOS=-355,0;CS=DEL_union;EAS_AF=0.5357;END=74933071;EUR_AF=0.5408;MC=BI_GS_DEL1_B5_P1141_957;NS=2504;SAS_AF=0.5695;SVTYPE=DEL\tGT\t1|1\n6\t74932723\tUW_VH_567\tC\t<CN0>\t100\tPASS\tAC=2284;AF=0.45607;AFR_AF=0.2224;AMR_AF=0.5014;AN=5008;CIEND=0,546;CIPOS=-472,0;CS=DEL_union;EAS_AF=0.5357;END=74932945;EUR_AF=0.5417;NS=2504;SAS_AF=0.5695;SVTYPE=DEL\tGT\t1|1\n6\t77097464\tBI_GS_DEL1_B5_P1144_101\tA\t<CN0>\t100\tPASS\tAC=2081;AF=0.415535;AFR_AF=0.0961;AMR_AF=0.5476;AN=5008;CIEND=0,1;CIPOS=0,1;CS=DEL_union;EAS_AF=0.4137;END=77102643;EUR_AF=0.6203;MC=UW_VH_569,YL_CN_ESN_1550,UW_VH_19004,EM_DL_DEL85244,UW_VH_4351;NS=2504;SAS_AF=0.545;SVTYPE=DEL\tGT\t0|1\n6\t77437459\tDUP_gs_CNV_6_77437459_77453275\tT\t<CN0>,<CN2>\t.\tPASS\tAC=714,2;AF=0.142572,0.00039936;AFR_AF=0.09,0;AMR_AF=0.1556,0;AN=5008;CS=DUP_gs;EAS_AF=0.0169,0.002;END=77453275;EUR_AF=0.2495,0;MC=EM_DL_DEL85254,UW_VH_4433,UW_VH_11206,UW_VH_2970,UW_VH_4989,SI_BD_6792,YL_CN_ESN_1551;NS=2504;SAS_AF=0.2239,0;SITEPOST=1;SVTYPE=CNV\tGT\t1|0\n6\t77449470\tBI_GS_DEL1_B4_P1144_83\tA\t<CN0>\t100\tPASS\tAC=783;AF=0.15635;AFR_AF=0.1445;AMR_AF=0.1599;AN=5008;CIEND=-3,4;CIPOS=-3,4;CS=DEL_union;EAS_AF=0.0159;END=77452760;EUR_AF=0.2455;MC=SI_BD_6793;NS=2504;SAS_AF=0.2229;SVTYPE=DEL\tGT\t1|0\n6\t77980649\tL1_umary_LINE1_1336\tT\t<INS:ME:LINE1>\t.\t.\tAC=2016;AF=0.402556;AFR_AF=0.2035;AMR_AF=0.4207;AN=5008;CS=L1_umary;EAS_AF=0.4117;EUR_AF=0.5646;MEINFO=LINE1,5228,6019,-;NS=2504;SAS_AF=0.4826;SITEPOST=1;SVLEN=791;SVTYPE=LINE1;TSD=null\tGT\t1|0\n6\t79723801\tALU_umary_ALU_5314\tT\t<INS:ME:ALU>\t.\t.\tAC=378;AF=0.0754792;AFR_AF=0.0681;AMR_AF=0.0663;AN=5008;CS=ALU_umary;EAS_AF=0.0933;EUR_AF=0.0785;MEINFO=AluYa3_4,98,281,-;NS=2504;SAS_AF=0.0706;SITEPOST=1;SVLEN=183;SVTYPE=ALU;TSD=TACAAACCTTATTTCTT\tGT\t0|1\n6\t80086769\tALU_umary_ALU_5318\tT\t<INS:ME:ALU>\t.\t.\tAC=166;AF=0.033147;AFR_AF=0.0136;AMR_AF=0.0187;AN=5008;CS=ALU_umary;EAS_AF=0.001;EUR_AF=0.0636;MEINFO=AluUndef,1,275,-;NS=2504;SAS_AF=0.0716;SITEPOST=1;SVLEN=274;SVTYPE=ALU;TSD=AAAGTCAAAGTTTTATTCTTTCTT\tGT\t1|0\n6\t80609906\tDEL_pindel_19532\tAAGGAAATGTCTTGTTTCCAAAATTATACCACTGTCCCCCAAATAGTTATATGAATTTCAGTTACAATTAGG\tA\t.\tPASS\tAC=1486;AF=0.296725;AFR_AF=0.2065;AMR_AF=0.3732;AN=5008;CS=DEL_pindel;EAS_AF=0.4603;END=80609977;EUR_AF=0.2833;NS=2504;SAS_AF=0.2096;SITEPOST=0.9994;SVTYPE=DEL\tGT\t0|1\n6\t81283720\tBI_GS_DEL1_B4_P1148_45\tC\t<CN0>\t100\tPASS\tAC=424;AF=0.0846645;AFR_AF=0.0008;AMR_AF=0.0994;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.1815;END=81293577;EUR_AF=0.0547;MC=EM_DL_DEL85400,UW_VH_2682,YL_CN_CLM_1289;NS=2504;SAS_AF=0.1186;SVTYPE=DEL\tGT\t1|0\n6\t83094623\tDEL_pindel_19587\tAATCCTGTAACTAATAACAGATGAGATGTTCATTATGTAGAGAGTGTTTTTTT\tA\t.\tPASS\tAC=1223;AF=0.244209;AFR_AF=0.2254;AMR_AF=0.2363;AN=5008;CS=DEL_pindel;EAS_AF=0.3145;END=83094675;EUR_AF=0.1849;NS=2504;SAS_AF=0.2638;SITEPOST=0.99645;SVTYPE=DEL\tGT\t0|1\n6\t86026352\tDEL_pindel_19647\tTAAGGGTGGGTCCCGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAA\tT\t.\tPASS\tAC=2910;AF=0.58107;AFR_AF=0.5386;AMR_AF=0.6254;AN=5008;CS=DEL_pindel;EAS_AF=0.5179;END=86026667;EUR_AF=0.5845;MEINFO=AluYa4_5,1,281,+;NS=2504;SAS_AF=0.6687;SITEPOST=0.9965;SVTYPE=DEL_ALU\tGT\t1|1\n6\t86144298\tDEL_pindel_19649\tTGAAATTGCAGGCCGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAATACAAAAAAAAATTAGCCGGGCGCGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCCCACCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAGA\tT\t.\tPASS\tAC=708;AF=0.141374;AFR_AF=0.2413;AMR_AF=0.0865;AN=5008;CS=DEL_pindel;EAS_AF=0.0536;END=86144632;EUR_AF=0.1332;MEINFO=AluYb6_2,1,281,+;NS=2504;SAS_AF=0.1442;SITEPOST=0.9997;SVTYPE=DEL_ALU\tGT\t1|0\n6\t87678642\tALU_umary_ALU_5348\tT\t<INS:ME:ALU>\t.\t.\tAC=168;AF=0.0335463;AFR_AF=0.0242;AMR_AF=0.036;AN=5008;CS=ALU_umary;EAS_AF=0.0179;EUR_AF=0.0666;MEINFO=AluUndef,2,281,-;NS=2504;SAS_AF=0.0266;SITEPOST=1;SVLEN=279;SVTYPE=ALU;TSD=TCACTTATGATTTTTT\tGT\t1|0\n6\t88118173\tDEL_pindel_19699\tTGCGCACACAGATCCGGAGCGCGCACACAGATCCGGAGCGCGCACACAGATCCGGAGCGCGCACACAGATCCGGAGCGCGCACACAGATCCGGAGCGCGCACACAGATCCGGAGCGCGCACACAGATCCGGAGC\tT\t.\tPASS\tAC=1224;AF=0.244409;AFR_AF=0.326;AMR_AF=0.232;AN=5008;CS=DEL_pindel;EAS_AF=0.2024;END=88118306;EUR_AF=0.2535;NS=2504;SAS_AF=0.1769;SITEPOST=0.9984;SVTYPE=DEL\tGT\t0|1\n6\t88651308\tDEL_pindel_19710\tTTTTTTGGCACTGCCTTGAGTAGATGTAATCTCTACCCTTTGCTAGAAAACAGAAATGGAAATAATATGAAGA\tT\t.\tPASS\tAC=295;AF=0.0589058;AFR_AF=0.0635;AMR_AF=0.062;AN=5008;CS=DEL_pindel;EAS_AF=0.001;END=88651380;EUR_AF=0.0934;NS=2504;SAS_AF=0.0746;SITEPOST=1;SVTYPE=DEL\tGT\t1|0\n6\t88698077\tALU_umary_ALU_5356\tT\t<INS:ME:ALU>\t.\t.\tAC=636;AF=0.126997;AFR_AF=0.2708;AMR_AF=0.1052;AN=5008;CS=ALU_umary;EAS_AF=0.0119;EUR_AF=0.1312;MEINFO=AluY,2,276,-;NS=2504;SAS_AF=0.0624;SITEPOST=1;SVLEN=274;SVTYPE=ALU;TSD=GGGCCCCTTTCTT\tGT\t0|1\n6\t89921713\tBI_GS_DEL1_B4_P1156_175\tG\t<CN0>\t100\tPASS\tAC=2438;AF=0.486821;AFR_AF=0.4236;AMR_AF=0.513;AN=5008;CIEND=-2,2;CIPOS=-2,2;CS=DEL_union;EAS_AF=0.3145;END=89922144;EUR_AF=0.5765;MC=UW_VH_575,DEL_pindel_19745;NS=2504;SAS_AF=0.6391;SVTYPE=DEL\tGT\t1|1\n6\t91125879\tALU_umary_ALU_5366\tT\t<INS:ME:ALU>\t.\t.\tAC=1296;AF=0.258786;AFR_AF=0.1051;AMR_AF=0.3487;AN=5008;CS=ALU_umary;EAS_AF=0.3631;EUR_AF=0.2992;MEINFO=AluYb8,1,278,-;NS=2504;SAS_AF=0.2536;SITEPOST=1;SVLEN=277;SVTYPE=ALU;TSD=CTAAAATATTATTGTGTAGTTATTCTT\tGT\t0|1\n6\t91237575\tDEL_pindel_19770\tTTCATAAGGACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGCGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCTACCACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTGTTAGCCAGAATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC\tT\t.\tPASS\tAC=2804;AF=0.559904;AFR_AF=0.6225;AMR_AF=0.4986;AN=5008;CS=DEL_pindel;EAS_AF=0.4534;END=91237896;EUR_AF=0.5964;MEINFO=AluYc1,1,281,-;NS=2504;SAS_AF=0.591;SITEPOST=0.9931;SVTYPE=DEL_ALU\tGT\t1|1\n6\t94397505\tDEL_pindel_19826\tAAAAAAATAATTATGCTCAACTAGGATTTATCCCAGAGACGCAAGAACAGTTCAACATATGC\tA\t.\tPASS\tAC=1485;AF=0.296526;AFR_AF=0.1415;AMR_AF=0.2896;AN=5008;CS=DEL_pindel;EAS_AF=0.3601;END=94397566;EUR_AF=0.4125;NS=2504;SAS_AF=0.3262;SITEPOST=0.9997;SVTYPE=DEL\tGT\t0|1\n6\t94930783\tALU_umary_ALU_5384\tT\t<INS:ME:ALU>\t.\t.\tAC=1116;AF=0.222843;AFR_AF=0.0756;AMR_AF=0.3847;AN=5008;CS=ALU_umary;EAS_AF=0.3056;EUR_AF=0.2604;MEINFO=AluYb8,1,276,-;NS=2504;SAS_AF=0.183;SITEPOST=1;SVLEN=275;SVTYPE=ALU;TSD=TCCAACTCTCTTTT\tGT\t1|0\n6\t95193325\tBI_GS_DEL1_B2_P1162_129\tA\t<CN0>\t100\tPASS\tAC=1928;AF=0.384984;AFR_AF=0.0809;AMR_AF=0.7061;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.3522;END=95194337;EUR_AF=0.5686;MC=UW_VH_1467;NS=2504;SAS_AF=0.4131;SVTYPE=DEL\tGT\t1|0\n6\t95335622\tDEL_pindel_19843\tATATTATTATTATTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATAATAT\tA\t.\tPASS\tAC=3107;AF=0.620407;AFR_AF=0.587;AMR_AF=0.7378;AN=5008;CS=DEL_pindel;EAS_AF=0.5764;END=95335927;EUR_AF=0.7008;MEINFO=AluY,24,281,-;NS=2504;SAS_AF=0.545;SITEPOST=0.9719;SVTYPE=DEL_ALU\tGT\t1|1\n6\t96009421\tALU_umary_ALU_5389\tT\t<INS:ME:ALU>\t.\t.\tAC=193;AF=0.0385383;AFR_AF=0.0091;AMR_AF=0.049;AN=5008;CS=ALU_umary;EAS_AF=0.0466;EUR_AF=0.0586;MEINFO=AluYa5,1,277,-;NS=2504;SAS_AF=0.0419;SITEPOST=1;SVLEN=276;SVTYPE=ALU;TSD=ATGTCTACTTCTTTCT\tGT\t0|1\n6\t97017683\tALU_umary_ALU_5395\tT\t<INS:ME:ALU>\t.\t.\tAC=554;AF=0.110623;AFR_AF=0.0787;AMR_AF=0.1427;AN=5008;CS=ALU_umary;EAS_AF=0.0337;EUR_AF=0.175;MEINFO=AluUndef,1,279,-;NS=2504;SAS_AF=0.1442;SITEPOST=1;SVLEN=278;SVTYPE=ALU;TSD=GTGAGTTTCTTTT\tGT\t1|0\n6\t98251340\tALU_umary_ALU_5402\tT\t<INS:ME:ALU>\t.\t.\tAC=1492;AF=0.297923;AFR_AF=0.1846;AMR_AF=0.3516;AN=5008;CS=ALU_umary;EAS_AF=0.3313;EUR_AF=0.4304;MEINFO=AluYa5,5,281,-;NS=2504;SAS_AF=0.2423;SITEPOST=1;SVLEN=276;SVTYPE=ALU;TSD=TAGACCATTTCT\tGT\t1|1\n6\t100034558\tSI_BD_6915\tT\t<CN0>\t100\tPASS\tAC=4663;AF=0.93111;AFR_AF=0.9856;AMR_AF=0.8545;AN=5008;CIEND=-52,320;CIPOS=-320,50;CS=DEL_union;EAS_AF=0.9931;END=100035368;EUR_AF=0.8091;MC=UW_VH_12127,UW_VH_578;NS=2504;SAS_AF=0.9734;SVTYPE=DEL\tGT\t1|0\n6\t104183184\tDEL_pindel_19946\tGAAAGAAATTCAGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA\tG\t.\tPASS\tAC=2558;AF=0.510783;AFR_AF=0.4675;AMR_AF=0.4813;AN=5008;CS=DEL_pindel;EAS_AF=0.5367;END=104183509;EUR_AF=0.4732;MEINFO=AluYa5,1,281,+;NS=2504;SAS_AF=0.6022;SITEPOST=0.9874;SVTYPE=DEL_ALU\tGT\t1|0\n6\t105567837\tDEL_pindel_19974\tTAAAAACATGGATTTGGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCGGAAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA\tT\t.\tPASS\tAC=3602;AF=0.719249;AFR_AF=0.6725;AMR_AF=0.732;AN=5008;CS=DEL_pindel;EAS_AF=0.7272;END=105568172;EUR_AF=0.7535;MEINFO=AluYa5,1,281,+;NS=2504;SAS_AF=0.7301;SITEPOST=0.952;SVTYPE=DEL_ALU\tGT\t1|1\n6\t106983622\tDEL_pindel_19993\tAAGCCACTAACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCCGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTG\tA\t.\tPASS\tAC=3875;AF=0.773762;AFR_AF=0.7685;AMR_AF=0.7651;AN=5008;CS=DEL_pindel;EAS_AF=0.7599;END=106983941;EUR_AF=0.7664;MEINFO=AluYb6_2,18,281,-;NS=2504;SAS_AF=0.8088;SITEPOST=0.9748;SVTYPE=DEL_ALU\tGT\t1|1\n6\t108266112\tDEL_pindel_20002\tCAAAAATCTAGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCTAGAACCCGCCACTGCACTCCAGCCTGGGCAACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAA\tC\t.\tPASS\tAC=3909;AF=0.780551;AFR_AF=0.7912;AMR_AF=0.768;AN=5008;CS=DEL_pindel;EAS_AF=0.754;END=108266415;EUR_AF=0.7843;MEINFO=AluYa5,1,281,+;NS=2504;SAS_AF=0.7986;SITEPOST=0.95395;SVTYPE=DEL_ALU\tGT\t1|0\n6\t110102982\tALU_umary_ALU_5467\tT\t<INS:ME:ALU>\t.\t.\tAC=1350;AF=0.269569;AFR_AF=0.0915;AMR_AF=0.3501;AN=5008;CS=ALU_umary;EAS_AF=0.2659;EUR_AF=0.4851;MEINFO=AluYb8,22,281,-;NS=2504;SAS_AF=0.2352;SITEPOST=1;SVLEN=259;SVTYPE=ALU;TSD=AGATTT\tGT\t1|1\n6\t114223973\tUW_VH_13135\tA\t<CN0>\t100\tPASS\tAC=1783;AF=0.35603;AFR_AF=0.3374;AMR_AF=0.3156;AN=5008;CIEND=0,371;CIPOS=-461,0;CS=DEL_union;EAS_AF=0.4504;END=114225052;EUR_AF=0.3549;MC=EM_DL_DEL10956041,UW_VH_4820,SI_BD_6993,UW_VH_14508;NS=2504;SAS_AF=0.3139;SVTYPE=DEL\tGT\t0|1\n6\t116844156\tALU_umary_ALU_5502\tG\t<INS:ME:ALU>\t.\t.\tAC=905;AF=0.180711;AFR_AF=0.1203;AMR_AF=0.1138;AN=5008;CS=ALU_umary;EAS_AF=0.2847;EUR_AF=0.1461;MEINFO=AluYa5,1,281,+;NS=2504;SAS_AF=0.2382;SITEPOST=1;SVLEN=280;SVTYPE=ALU;TSD=AAAATGTGGATTGCTG\tGT\t1|0\n6\t118626162\tALU_umary_ALU_5509\tT\t<INS:ME:ALU>\t.\t.\tAC=1826;AF=0.364617;AFR_AF=0.4985;AMR_AF=0.2536;AN=5008;CS=ALU_umary;EAS_AF=0.1964;EUR_AF=0.4185;MEINFO=AluUndef,22,280,-;NS=2504;SAS_AF=0.3804;SITEPOST=1;SVLEN=258;SVTYPE=ALU;TSD=AGTCAAAGATCTTT\tGT\t1|1\n6\t120380266\tALU_umary_ALU_5522\tT\t<INS:ME:ALU>\t.\t.\tAC=862;AF=0.172125;AFR_AF=0.0295;AMR_AF=0.2781;AN=5008;CS=ALU_umary;EAS_AF=0.1538;EUR_AF=0.2833;MEINFO=AluYc1,1,280,-;NS=2504;SAS_AF=0.1943;SITEPOST=1;SVLEN=279;SVTYPE=ALU;TSD=CCCTGCTCTTGTT\tGT\t1|1\n6\t121319292\tDEL_pindel_20215\tACCTTTCCCATTCTTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGCGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTACACAGGCGCCCGCTACCACGCCCGGCTAATGTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC\tA\t.\tPASS\tAC=2522;AF=0.503594;AFR_AF=0.2784;AMR_AF=0.5764;AN=5008;CS=DEL_pindel;EAS_AF=0.5813;END=121319616;EUR_AF=0.6372;MEINFO=AluYc1,1,281,-;NS=2504;SAS_AF=0.5389;SITEPOST=0.99095;SVTYPE=DEL_ALU\tGT\t0|1\n6\t122301643\tDEL_pindel_20244\tGCAGTATGTCCATTTTCTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACACCCGGCTAATTTTTTGTATTTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCACCCGGC\tG\t.\tPASS\tAC=3095;AF=0.618011;AFR_AF=0.5333;AMR_AF=0.647;AN=5008;CS=DEL_pindel;EAS_AF=0.6349;END=122301962;EUR_AF=0.6501;MEINFO=AluYa5,2,281,-;NS=2504;SAS_AF=0.6616;SITEPOST=0.9789;SVTYPE=DEL_ALU\tGT\t1|0\n6\t123515058\tDEL_pindel_20267\tTAAAAAACATCAGGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAAAATTAGCCGGGCGAGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCCAGGGGGCGGAGCCTGCAGTGAGCCGAGATTGCGCCACTGCACTCCAGCCTGGGCGACAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAA\tT\t.\tPASS\tAC=3322;AF=0.663339;AFR_AF=0.7784;AMR_AF=0.6945;AN=5008;CS=DEL_pindel;EAS_AF=0.4802;END=123515373;EUR_AF=0.7336;MEINFO=AluYe,1,281,+;NS=2504;SAS_AF=0.6022;SITEPOST=0.98955;SVTYPE=DEL_ALU\tGT\t1|1\n6\t124498906\tDEL_pindel_20294\tTTCTGTTCATCCATTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCCAA\tT\t.\tPASS\tAC=3525;AF=0.703874;AFR_AF=0.6732;AMR_AF=0.7233;AN=5008;CS=DEL_pindel;EAS_AF=0.7242;END=124499229;EUR_AF=0.7068;MEINFO=AluYa5,1,281,-;NS=2504;SAS_AF=0.7076;SITEPOST=0.957;SVTYPE=DEL_ALU\tGT\t0|1\n6\t125421421\tALU_umary_ALU_5557\tA\t<INS:ME:ALU>\t.\t.\tAC=1311;AF=0.261781;AFR_AF=0.2542;AMR_AF=0.2262;AN=5008;CS=ALU_umary;EAS_AF=0.1994;EUR_AF=0.3479;MEINFO=AluYa5,1,281,+;NS=2504;SAS_AF=0.273;SITEPOST=1;SVLEN=280;SVTYPE=ALU;TSD=AAAAAAAA\tGT\t0|1\n6\t126468009\tUW_VH_589\tA\t<CN0>\t100\tPASS\tAC=1999;AF=0.399161;AFR_AF=0.5696;AMR_AF=0.3545;AN=5008;CIEND=0,429;CIPOS=-491,0;CS=DEL_union;EAS_AF=0.1081;END=126468247;EUR_AF=0.505;MC=DEL_pindel_20332,BI_GS_DEL1_B2_P1193_357;NS=2504;SAS_AF=0.3916;SVTYPE=DEL\tGT\t1|1\n6\t129737070\tDEL_pindel_20371\tTGAAATTATACACTTTCTTTCTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC\tT\t.\tPASS\tAC=2078;AF=0.414936;AFR_AF=0.4803;AMR_AF=0.3602;AN=5008;CS=DEL_pindel;EAS_AF=0.4216;END=129737384;EUR_AF=0.3738;MEINFO=AluYa5,1,281,-;NS=2504;SAS_AF=0.4008;SITEPOST=0.9968;SVTYPE=DEL_ALU\tGT\t1|0\n6\t131113279\tALU_umary_ALU_5589\tC\t<INS:ME:ALU>\t.\t.\tAC=1035;AF=0.206669;AFR_AF=0.1157;AMR_AF=0.2435;AN=5008;CS=ALU_umary;EAS_AF=0.1419;EUR_AF=0.3012;MEINFO=AluYb8,3,279,+;NS=2504;SAS_AF=0.273;SITEPOST=1;SVLEN=276;SVTYPE=ALU;TSD=AAAATCTCAAGGCC\tGT\t0|1\n6\t131273499\tALU_umary_ALU_5591\tG\t<INS:ME:ALU>\t.\t.\tAC=501;AF=0.10004;AFR_AF=0.0363;AMR_AF=0.1239;AN=5008;CS=ALU_umary;EAS_AF=0.0248;EUR_AF=0.1988;MEINFO=AluUndef,1,261,+;NS=2504;SAS_AF=0.1452;SITEPOST=1;SVLEN=260;SVTYPE=ALU;TSD=AAAATGTTCACTAAAG\tGT\t0|1\n6\t131418012\tBI_GS_DEL1_B1_P1198_405\tC\t<CN0>\t100\tPASS\tAC=814;AF=0.16254;AFR_AF=0.0658;AMR_AF=0.2176;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.0298;END=131418980;EUR_AF=0.2853;MC=EM_DL_DEL10962433;NS=2504;SAS_AF=0.2648;SVTYPE=DEL\tGT\t1|0\n6\t132697628\tDEL_pindel_20434\tTAACTACAGCTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC\tT\t.\tPASS\tAC=2293;AF=0.457867;AFR_AF=0.7201;AMR_AF=0.2939;AN=5008;CS=DEL_pindel;EAS_AF=0.5843;END=132697951;EUR_AF=0.1998;MEINFO=AluYa4_4,1,281,-;NS=2504;SAS_AF=0.3548;SITEPOST=0.9947;SVTYPE=DEL_ALU\tGT\t1|0\n6\t132707465\tUW_VH_4535\tC\t<CN0>\t100\tPASS\tAC=160;AF=0.0319489;AFR_AF=0;AMR_AF=0.0375;AN=5008;CIEND=0,239;CIPOS=-429,0;CS=DEL_union;EAS_AF=0.002;END=132712439;EUR_AF=0.0527;MC=EM_DL_DEL86970,BI_GS_DEL1_B4_P1199_148,SI_BD_7074,YL_CN_GBR_1473;NS=2504;SAS_AF=0.0808;SVTYPE=DEL\tGT\t1|0\n6\t133371487\tDEL_pindel_20447\tTGCCAATTTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCCGGACTGCGGACTGCAGTGGCGCCATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCTTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC\tT\t.\tPASS\tAC=2176;AF=0.434505;AFR_AF=0.6172;AMR_AF=0.402;AN=5008;CS=DEL_pindel;EAS_AF=0.2827;END=133371831;EUR_AF=0.4294;MEINFO=AluYb,1,281,-;NS=2504;SAS_AF=0.3722;SITEPOST=0.99895;SVTYPE=DEL_ALU\tGT\t0|1\n6\t134268952\tBI_GS_DEL1_B4_P1201_57\tG\t<CN0>\t100\tPASS\tAC=1338;AF=0.267173;AFR_AF=0.1566;AMR_AF=0.3357;AN=5008;CIEND=-1,1;CIPOS=-1,1;CS=DEL_union;EAS_AF=0.1558;END=134269719;EUR_AF=0.5169;MC=DEL_pindel_20466;NS=2504;SAS_AF=0.226;SVTYPE=DEL\tGT\t0|1\n6\t137313691\tBI_GS_DEL1_B1_P1204_268\tA\t<CN0>\t100\tPASS\tAC=4207;AF=0.840056;AFR_AF=0.441;AMR_AF=0.9323;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.999;END=137314188;EUR_AF=0.9881;MC=DEL_pindel_20506;NS=2504;SAS_AF=0.998;SVTYPE=DEL\tGT\t1|1\n6\t141325707\tDEL_pindel_20585\tTAAAATCCACTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCCGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCCAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTGTATTTTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGC\tT\t.\tPASS\tAC=2464;AF=0.492013;AFR_AF=0.6059;AMR_AF=0.513;AN=5008;CS=DEL_pindel;EAS_AF=0.3433;END=141326033;EUR_AF=0.5596;MEINFO=AluYb6_2,2,281,-;NS=2504;SAS_AF=0.407;SITEPOST=0.9941;SVTYPE=DEL_ALU\tGT\t1|1\n6\t141548586\tBI_GS_DEL1_B4_P1208_126\tC\t<CN0>\t100\tPASS\tAC=1339;AF=0.267372;AFR_AF=0.1846;AMR_AF=0.2954;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.255;END=141550030;EUR_AF=0.3887;MC=YL_CN_CLM_1314,YL_CN_CHB_1556,YL_CN_JPT_1674,SI_BD_7124,YL_CN_PUR_1852,UW_VH_599;NS=2504;SAS_AF=0.2474;SVTYPE=DEL\tGT\t1|0\n6\t145818662\tDEL_pindel_20692\tGGATCCACTTAAGGAAGTGATCTAGCCATGCTTTCCTAGAGTAGCTGTGCTGTGCTGTTGTATTGCTTCCGTCTGTGGTAAGCCTGGGCTCTCCAAAGC\tG\t.\tPASS\tAC=2306;AF=0.460463;AFR_AF=0.4289;AMR_AF=0.3674;AN=5008;CS=DEL_pindel;EAS_AF=0.4187;END=145818760;EUR_AF=0.4612;NS=2504;SAS_AF=0.6115;SITEPOST=1;SVTYPE=DEL\tGT\t1|0\n6\t148506314\tDEL_pindel_20752\tCTACAGGCATGCACCAACATGCCCAGCTAAGTTTTTTATGTTTTAGTAGAGATGGGGTTTCACCATATTGGCCAGGCTGGTCTCGAACTCCTGTCCTCGTAATCTGCCCATCTCAGCCTCCCAAATTGCTGGGAT\tC\t.\tPASS\tAC=1258;AF=0.251198;AFR_AF=0.1551;AMR_AF=0.2824;AN=5008;CS=DEL_pindel;EAS_AF=0.3165;END=148506448;EUR_AF=0.2793;NS=2504;SAS_AF=0.2628;SITEPOST=0.9985;SVTYPE=DEL\tGT\t0|1\n6\t149632778\tDEL_pindel_20781\tTACCACTGTCAATGCTAGTGTTAGTAACTGGTTTATAATTAGTAAATTTTGTATGCCCCAAATTCCTATCACATTTGTGCTTTACACCCATGTTATCAATATGCCATGTTCTACATTTAGCAATATTTTCTAAGATCTTATATTGGAATCTAGTCTCAAAAATGGAA\tT\t.\tPASS\tAC=2110;AF=0.421326;AFR_AF=0.3464;AMR_AF=0.415;AN=5008;CS=DEL_pindel;EAS_AF=0.4196;END=149632944;EUR_AF=0.493;NS=2504;SAS_AF=0.455;SITEPOST=1;SVTYPE=DEL\tGT\t0|1\n6\t151485895\tUW_VH_11750\tG\t<CN0>\t100\tPASS\tAC=1715;AF=0.342452;AFR_AF=0.0703;AMR_AF=0.389;AN=5008;CIEND=0,524;CIPOS=-441,0;CS=DEL_union;EAS_AF=0.5109;END=151486930;EUR_AF=0.4493;MC=UW_VH_20341,UW_VH_3611,SI_BD_7179,BI_GS_DEL1_B1_P1218_414,UW_VH_12285,UW_VH_600;NS=2504;SAS_AF=0.3937;SVTYPE=DEL\tGT\t0|1\n6\t153408248\tDEL_pindel_20877\tTCTCTACTAAAAATACAAAAATTAGCTGGGCGTGGTGGTGCACGCTTGTAATCCCAGCTA\tT\t.\tPASS\tAC=1959;AF=0.391174;AFR_AF=0.3328;AMR_AF=0.5144;AN=5008;CS=DEL_pindel;EAS_AF=0.2738;END=153408307;EUR_AF=0.5308;NS=2504;SAS_AF=0.3599;SITEPOST=0.9991;SVTYPE=DEL\tGT\t0|1\n6\t153429856\tSVA_umary_SVA_315\tC\t<INS:ME:SVA>\t.\t.\tAC=1648;AF=0.329073;AFR_AF=0.2602;AMR_AF=0.1931;AN=5008;CS=SVA_umary;EAS_AF=0.5347;EUR_AF=0.2525;MEINFO=SVA,1245,1627,+;NS=2504;SAS_AF=0.3855;SITEPOST=1;SVLEN=382;SVTYPE=SVA;TSD=AGAAAATTCCCCTACATTCC\tGT\t1|0\n6\t153633385\tALU_umary_ALU_5701\tT\t<INS:ME:ALU>\t.\t.\tAC=1468;AF=0.293131;AFR_AF=0.351;AMR_AF=0.4179;AN=5008;CS=ALU_umary;EAS_AF=0.1687;EUR_AF=0.2932;MEINFO=AluUndef,8,281,-;NS=2504;SAS_AF=0.2546;SITEPOST=1;SVLEN=273;SVTYPE=ALU;TSD=TTTTTCTCTGCCTTCT\tGT\t0|1\n6\t154446915\tDEL_pindel_20902\tAGGCTAGACATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACAGAGTCTCGCTCTGTCGCCCAGGCTGGAGTACAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGATCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCCC\tA\t.\tPASS\tAC=3553;AF=0.709465;AFR_AF=0.5734;AMR_AF=0.7594;AN=5008;CS=DEL_pindel;EAS_AF=0.755;END=154447237;EUR_AF=0.7465;MEINFO=AluYa5,1,281,-;NS=2504;SAS_AF=0.773;SITEPOST=0.9812;SVTYPE=DEL_ALU\tGT\t1|0\n6\t154463239\tDEL_pindel_20903\tTCCCCTCCAACCTCTGGCCGTCTCTGCTGGGCTTGTGTTACAGTGGGTAGCTCATCAGGCATGAGCAGGGCAGGACAGGACTCCCCACCCCA\tT\t.\tPASS\tAC=1797;AF=0.358826;AFR_AF=0.3593;AMR_AF=0.4625;AN=5008;CS=DEL_pindel;EAS_AF=0.2966;END=154463330;EUR_AF=0.4125;NS=2504;SAS_AF=0.2935;SITEPOST=0.9998;SVTYPE=DEL\tGT\t0|1\n6\t154686517\tDEL_pindel_20913\tTAAGAAAATCATATCCCAGCACTTTGGAAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTGGTAGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCGCGCCACTGCACTCCAGCCTGGGCGACAGATCGAGACTCCGTCTCAAAAAAAAAAA\tT\t.\tPASS\tAC=1551;AF=0.309704;AFR_AF=0.295;AMR_AF=0.2622;AN=5008;CS=DEL_pindel;EAS_AF=0.3135;END=154686793;EUR_AF=0.3091;MEINFO=AluYc2,28,281,+;NS=2504;SAS_AF=0.3599;SITEPOST=0.9999;SVTYPE=DEL_ALU\tGT\t1|0\n6\t154882352\tDEL_pindel_20921\tCAGACTCAAACTGAAATATTGGCTCTTCCTCGGTCCCCAGCCTGCCAGTTTTGGACTGGAACTATACCATTTGCTCTCCTGGTTCTCAAGCCTTCAGACTCAGACTGGAGTTAAATTGT\tC\t.\tPASS\tAC=316;AF=0.063099;AFR_AF=0.1377;AMR_AF=0.0548;AN=5008;CS=DEL_pindel;EAS_AF=0.0397;END=154882470;EUR_AF=0.0328;NS=2504;SAS_AF=0.0235;SITEPOST=0.9994;SVTYPE=DEL\tGT\t0|1\n6\t158548266\tDEL_pindel_21003\tTGAAAAATGAACATATCTCGGCCCCCCCGCCCAGCCAGCCGCCCTGTCCGGGAGGTGAGGGGCGCCTCTGCCCGGCCGCCCCTACTGGGAAGTGAGGAGCCCCTCTGCCCGGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGGGTCAGCCCCCCTGCCCGGCCAGCCGCCCCGTCCGGGAGGTGAGGGGCGCCTCTGCCCGGCCGCCCCTACTGGGAAGTGAGGAGCCCCTCTGTCCGGCCACCACCCCGTCTGGGAGGTGTGCCCAACAGCTCATTGAGAACGGGCCAGGATGACAATGGCGGCTTTGTGGAATAGAAAGGCGGGAAAGGTGGGGAAAAGATTGAGAAATTGGATGGTTGCCGTGTCTGTGTAGAAAGAAGTAGACATGGGAGACTTTTCATTTTGTTCTGCACTAAGAAAAATTCCTCTGCCTTGGGATCCTGTTGATCTGTGACCTTACCCCCAACCCTGTGCTCTCTGAAACATGTGCTGTGTCCACTCAGGGTTAAATGGATTAAGGGCGGTGCAAGATGTGCTTTGTTAAACAGATGCTTGAAGGCAGCATGCTCGTTAAGAGTCATCACCAATCCCTAATCTCAAGTAATCAGGGACACAAACACTGCGGAAGGCCGCAGGGTCCTCTGCCTAGGAAAACCAGAGACCTTTGTTCACTTGTTTATCTGCTGACCTTCCCTCCACTATTGTCCCATGACCCTGCCAAATCCCCCTCTGTGAGAAACACCCAAGAATTATCAATAAAAAAATAAATTTAAAAAAAAAAAAAAAAAAAAAAAAAAA\tT\t.\tPASS\tAC=3485;AF=0.695887;AFR_AF=0.6687;AMR_AF=0.7104;AN=5008;CS=DEL_pindel;EAS_AF=0.7431;END=158549066;EUR_AF=0.66;MEINFO=SVA_F,1030,1627,+;NS=2504;SAS_AF=0.7106;SITEPOST=0.978;SVTYPE=DEL_SVA\tGT\t1|1\n6\t158876076\tDEL_pindel_21015\tGCAAATTTAACATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTTGCCCAGGCCGGACTGCGGACTGCAATGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCTGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGC\tG\t.\tPASS\tAC=2397;AF=0.478634;AFR_AF=0.5764;AMR_AF=0.4294;AN=5008;CS=DEL_pindel;EAS_AF=0.3542;END=158876404;EUR_AF=0.4771;MEINFO=AluYb3a1,2,281,-;NS=2504;SAS_AF=0.5112;SITEPOST=0.9977;SVTYPE=DEL_ALU\tGT\t1|1\n6\t159204431\tALU_umary_ALU_5729\tT\t<INS:ME:ALU>\t.\t.\tAC=1651;AF=0.329673;AFR_AF=0.3071;AMR_AF=0.2594;AN=5008;CS=ALU_umary;EAS_AF=0.1746;EUR_AF=0.4851;MEINFO=AluYb6_2,2,276,+;NS=2504;SAS_AF=0.41;SITEPOST=1;SVLEN=274;SVTYPE=ALU;TSD=AAAAAGTTTCCT\tGT\t1|0\n6\t160086252\tUW_VH_1786\tG\t<CN0>\t100\tPASS\tAC=1317;AF=0.262979;AFR_AF=0.143;AMR_AF=0.2406;AN=5008;CIEND=0,492;CIPOS=-487,0;CS=DEL_union;EAS_AF=0.4177;END=160088699;EUR_AF=0.2654;MC=YL_CN_CEU_1948,YL_CN_GBR_1489,YL_CN_JPT_1693,BI_GS_DEL1_B1_P1227_64,YL_CN_FIN_1458,YL_CN_GWD_2159,EM_DL_DEL87571;NS=2504;SAS_AF=0.2791;SVTYPE=DEL\tGT\t1|0\n6\t161274256\tDEL_pindel_21063\tATCGTCTTTTCTCTGGGTTCACTGTTGTATATTCTCTGGGTGCACCGTAGTCTTTTCTCTGGGTTCACTCTCGTCATCTCTCTGGGTTCACTGTCGTATGTTCTCTGGGTTCACCATTGTTGATTCTCTGGGTCCCTTTTTCTCTGGATGCGCTGTCATCTTTTCTCTGGGTTCACCGTCGTCTTTTCTCTGGGCTCACTGTCATCTTTTCTCTGGGTTCACTGTCATATTTTCTCTGGGTTCACCATGATCTTTTCTCTGGGTTCACTGTTCTGTGGGTTCACTGTCGTCTTATTTCTGAATTCGCTGTCGCCTTTTCTCTGGGTTCACCATAGTCTTTTCTCTGGGTTCACTGTTGTATATTCTCTGGGTGCACCG\tA\t.\tPASS\tAC=1896;AF=0.378594;AFR_AF=0.3593;AMR_AF=0.3876;AN=5008;CS=DEL_pindel;EAS_AF=0.4583;END=161274633;EUR_AF=0.2962;NS=2504;SAS_AF=0.4008;SITEPOST=1;SVTYPE=DEL\tGT\t0|1\n6\t161684136\tDEL_pindel_21075\tCGGTGGGCGGGGTGTTTCTCACACCTGCCTGCCCCACCCCACCCCACCACCAAGATTCCCAGCCACCTTGGATGCTTAAGGAAGGTGCATTTCCCCCGGTGAG\tC\t.\tPASS\tAC=3038;AF=0.606629;AFR_AF=0.8563;AMR_AF=0.6153;AN=5008;CS=DEL_pindel;EAS_AF=0.5337;END=161684238;EUR_AF=0.5129;NS=2504;SAS_AF=0.4346;SITEPOST=0.9998;SVTYPE=DEL\tGT\t0|1\n6\t162583796\tUW_VH_4804\tC\t<CN0>\t100\tPASS\tAC=423;AF=0.0844649;AFR_AF=0.1747;AMR_AF=0.0764;AN=5008;CIEND=0,435;CIPOS=-402,0;CS=DEL_union;EAS_AF=0.0238;END=162586803;EUR_AF=0.0706;MC=YL_CN_TSI_1465,YL_CN_YRI_2012,UW_VH_3143,YL_CN_GWD_2169,BI_GS_DEL1_B2_P1229_381,UW_VH_12103;NS=2504;SAS_AF=0.045;SVTYPE=DEL\tGT\t1|0\n6\t162852220\tDEL_pindel_21121\tAAAGAAAAAAATGGACTTGGTTGCCTTGTGGAGAATGGATAGTAGTTGAGCCTTGTGGTGAATGGATAGTAATT\tA\t.\tPASS\tAC=639;AF=0.127596;AFR_AF=0.2239;AMR_AF=0.0562;AN=5008;CS=DEL_pindel;EAS_AF=0.0962;END=162852293;EUR_AF=0.0577;NS=2504;SAS_AF=0.1524;SITEPOST=0.999;SVTYPE=DEL\tGT\t1|0\n6\t163814230\tALU_umary_ALU_5746\tC\t<INS:ME:ALU>\t.\t.\tAC=2491;AF=0.497404;AFR_AF=0.3911;AMR_AF=0.5216;AN=5008;CS=ALU_umary;EAS_AF=0.6498;EUR_AF=0.4463;MEINFO=AluYg6,1,281,+;NS=2504;SAS_AF=0.5194;SITEPOST=1;SVLEN=280;SVTYPE=ALU;TSD=AAAAGATGAGGTCTC\tGT\t0|1\n6\t165186931\tALU_umary_ALU_5750\tC\t<INS:ME:ALU>\t.\t.\tAC=1291;AF=0.257788;AFR_AF=0.2352;AMR_AF=0.3127;AN=5008;CS=ALU_umary;EAS_AF=0.2629;EUR_AF=0.167;MEINFO=AluYc1,13,280,-;NS=2504;SAS_AF=0.3374;SITEPOST=1;SVLEN=267;SVTYPE=ALU;TSD=TC\tGT\t1|0\n6\t167928592\tDEL_pindel_21251\tTGTCATCACTCGTCAACACTATCACAGTCATTATCACATCATCACCATCATCGTCATCAGCATCTTGATCACCACCATCATCAGAATGGGAACAAAAAAAGCCCATCATC\tT\t.\tPASS\tAC=3268;AF=0.652556;AFR_AF=0.6346;AMR_AF=0.6671;AN=5008;CS=DEL_pindel;EAS_AF=0.6736;END=167928701;EUR_AF=0.663;NS=2504;SAS_AF=0.6339;SITEPOST=0.9562;SVTYPE=DEL\tGT\t1|1\n6\t170038118\tDEL_pindel_21305\tTAAGAAACTAATTGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGCGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCCGACCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAA\tT\t.\tPASS\tAC=1321;AF=0.263778;AFR_AF=0.4864;AMR_AF=0.1628;AN=5008;CS=DEL_pindel;EAS_AF=0.1409;END=170038445;EUR_AF=0.2256;MEINFO=AluYb6_2,1,281,+;NS=2504;SAS_AF=0.2004;SITEPOST=1;SVTYPE=DEL_ALU\tGT\t1|0\n6\t170206128\tDEL_pindel_21312\tACACAGAGCTCTTCACATACGCAGAGCTCTCCACACCACAGAATTCTCCATAGACACAGAACTCGCTCTCCACACAACAGAGCTCTTCACACCACACAGCTCTCAGTGTACACAAAGTTCTTCACACCACAGAACTCTACTTGCCACAGAGTGCTCCATAGACACAGGGCTCTCCACACCACAGAGCTCTACACACTAAAGAATTCTCCACAGACAGAGCGCTCTACACTCCACAGAGCTCTCCAGAGACACAGAGCTCTCCACACCACAGAGACTTCCATAT\tA\t.\tPASS\tAC=1569;AF=0.313299;AFR_AF=0.3434;AMR_AF=0.3213;AN=5008;CS=DEL_pindel;EAS_AF=0.4633;END=170206410;EUR_AF=0.1889;NS=2504;SAS_AF=0.2403;SITEPOST=0.9849;SVTYPE=DEL\tGT\t1|0\n6\t170465430\tDEL_pindel_21324\tCCCAACAAGCCTGCTGCCTGCCACCCCTCCACTGCCTACAGTGTAGACAGAGGCTCACCTCCTG\tC\t.\tPASS\tAC=2357;AF=0.470647;AFR_AF=0.4304;AMR_AF=0.4798;AN=5008;CS=DEL_pindel;EAS_AF=0.4782;END=170465493;EUR_AF=0.4801;NS=2504;SAS_AF=0.501;SITEPOST=0.963;SVTYPE=DEL\tGT\t1|0\n6\t170500768\tALU_umary_ALU_5771\tC\t<INS:ME:ALU>\t.\t.\tAC=1340;AF=0.267572;AFR_AF=0.1528;AMR_AF=0.2651;AN=5008;CS=ALU_umary;EAS_AF=0.3482;EUR_AF=0.3161;MEINFO=AluYc1,1,281,-;NS=2504;SAS_AF=0.2914;SITEPOST=1;SVLEN=280;SVTYPE=ALU;TSD=CAACAATAAAATATTC\tGT\t1|0\n7\t904330\tDEL_pindel_21372\tATCTCGGCTCGCCGCAACCTCTGCCTCCCGGCTTCAAGCAATTCTCCTGCCTCAGCC\tA\t.\tPASS\tAC=3173;AF=0.633586;AFR_AF=0.5719;AMR_AF=0.6628;AN=5008;CS=DEL_pindel;EAS_AF=0.6429;END=904386;EUR_AF=0.6044;NS=2504;SAS_AF=0.7168;SITEPOST=0.999;SVTYPE=DEL\tGT\t0|1\n7\t1185070\tBI_GS_DEL1_B1_P1240_104\tT\t<CN0>\t100\tPASS\tAC=3662;AF=0.73123;AFR_AF=0.7943;AMR_AF=0.7032;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.6349;END=1187665;EUR_AF=0.7425;NS=2504;SAS_AF=0.7536;SVTYPE=DEL\tGT\t1|1\n7\t1898671\tDEL_pindel_21436\tTGGAGCAGACCTCCACACCAAACCCCATACGCAGGAGGGCCAGGCACCTGAGAGAGGCCTGCAGAGAC\tT\t.\tPASS\tAC=1082;AF=0.216054;AFR_AF=0.025;AMR_AF=0.2997;AN=5008;CS=DEL_pindel;EAS_AF=0.3234;END=1898738;EUR_AF=0.2545;NS=2504;SAS_AF=0.2648;SITEPOST=0.996;SVTYPE=DEL\tGT\t1|0\n7\t4158162\tUW_VH_2937\tA\t<CN0>\t100\tPASS\tAC=379;AF=0.0756789;AFR_AF=0.0545;AMR_AF=0.0677;AN=5008;CIEND=0,378;CIPOS=-334,0;CS=DEL_union;EAS_AF=0.001;END=4160313;EUR_AF=0.1223;MC=YL_CN_GBR_1532,YL_CN_TSI_1494,YL_CN_ITU_1578,BI_GS_DEL1_B1_P1243_137;NS=2504;SAS_AF=0.1391;SVTYPE=DEL\tGT\t1|0\n7\t7583520\tUW_VH_6814\tC\t<CN0>\t100\tPASS\tAC=2746;AF=0.548323;AFR_AF=0.1611;AMR_AF=0.7046;AN=5008;CIEND=0,279;CIPOS=-262,0;CS=DEL_union;EAS_AF=0.7083;END=7584968;EUR_AF=0.6859;MC=BI_GS_DEL1_B5_P1246_728;NS=2504;SAS_AF=0.6544;SVTYPE=DEL\tGT\t1|1\n7\t8463553\tBI_GS_DEL1_B3_P1247_22\tA\t<CN0>\t100\tPASS\tAC=108;AF=0.0215655;AFR_AF=0.0023;AMR_AF=0.0331;AN=5008;CIEND=-1,2;CIPOS=-1,2;CS=DEL_union;EAS_AF=0;END=8465548;EUR_AF=0.0646;MC=EM_DL_DEL88117,UW_VH_2221,YL_CN_CLM_1374;NS=2504;SAS_AF=0.0174;SVTYPE=DEL\tGT\t0|1\n7\t8698628\tBI_GS_DEL1_B3_P1247_39\tT\t<CN0>\t100\tPASS\tAC=3230;AF=0.644968;AFR_AF=0.4327;AMR_AF=0.7104;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.7401;END=8698847;EUR_AF=0.7028;MC=DEL_pindel_21642,UW_VH_609;NS=2504;SAS_AF=0.728;SVTYPE=DEL\tGT\t1|1\n7\t10504231\tYL_CN_ASW_1703\tG\t<CN0>\t100\tPASS\tAC=2977;AF=0.594449;AFR_AF=0.8389;AMR_AF=0.7133;AN=5008;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0.4633;END=10506240;EUR_AF=0.5795;MC=YL_CN_CLM_1376;NS=2504;SAS_AF=0.3303;SVTYPE=DEL\tGT\t1|0\n7\t10834757\tDEL_pindel_21688\tATATATACGTATATACATGTATATATACGTATATATACATGTATATATACGTATATACATGTATATATACGTATATATACATATATATACGTATATACATATATGTATATACATGTATATATG\tA\t.\tPASS\tAC=2602;AF=0.519569;AFR_AF=0.5696;AMR_AF=0.4496;AN=5008;CS=DEL_pindel;EAS_AF=0.6716;END=10834879;EUR_AF=0.4264;NS=2504;SAS_AF=0.4407;SITEPOST=0.99365;SVTYPE=DEL\tGT\t0|1\n7\t13649223\tALU_umary_ALU_5834\tT\t<INS:ME:ALU>\t.\t.\tAC=290;AF=0.0579074;AFR_AF=0.0068;AMR_AF=0.0706;AN=5008;CS=ALU_umary;EAS_AF=0.0149;EUR_AF=0.1153;MEINFO=AluUndef,6,280,-;NS=2504;SAS_AF=0.1033;SITEPOST=1;SVLEN=274;SVTYPE=ALU;TSD=CTATATCAGACCTCTT\tGT\t1|0\n7\t13663189\tDEL_pindel_21748\tGAAATGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTCGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAA\tG\t.\tPASS\tAC=4701;AF=0.938698;AFR_AF=0.8094;AMR_AF=0.9697;AN=5008;CS=DEL_pindel;EAS_AF=0.9851;END=13663455;EUR_AF=0.9881;MEINFO=AluY,44,281,+;NS=2504;SAS_AF=0.9928;SITEPOST=1;SVTYPE=DEL_ALU\tGT\t1|1\n7\t14451264\tDEL_pindel_21764\tATCTTTCAAGGTGGCTGTAAGATAAACAGTATAATACACACATCTTAACACATTTTCTGACAATGATAACTGTTCTTCAGACAAAAACTTCTATCCTAATAGTTTCTCATCTTTCTCCCCTACCTCTTTCTTTTTTTTCTGGAAATAATTATAGATACAAAGAAAGC\tA\t.\tPASS\tAC=3392;AF=0.677316;AFR_AF=0.612;AMR_AF=0.6383;AN=5008;CS=DEL_pindel;EAS_AF=0.6468;END=14451430;EUR_AF=0.8211;NS=2504;SAS_AF=0.6769;SITEPOST=0.9991;SVTYPE=DEL\tGT\t0|1\n7\t14680853\tDEL_pindel_21769\tTTTTACAATATAGGGATTTGGTTTACAATATAGGGATTTGGTTTACAATATAGGGATTTGGTTTACAATATAGGGATTTGG\tT\t.\tPASS\tAC=1644;AF=0.328275;AFR_AF=0.3079;AMR_AF=0.4496;AN=5008;CS=DEL_pindel;EAS_AF=0.2173;END=14680933;EUR_AF=0.3917;NS=2504;SAS_AF=0.319;SITEPOST=0.9962;SVTYPE=DEL\tGT\t1|0\n7\t14910419\tDEL_pindel_21778\tTAAAAAAAAGAAAATTGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTGGTAGCGAGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGAGATCGCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAA\tT\t.\tPASS\tAC=3735;AF=0.745807;AFR_AF=0.7088;AMR_AF=0.7752;AN=5008;CS=DEL_pindel;EAS_AF=0.7609;END=14910737;EUR_AF=0.7584;MEINFO=AluYc1,1,281,+;NS=2504;SAS_AF=0.7464;SITEPOST=0.9456;SVTYPE=DEL_ALU\tGT\t1|1\n7\t16171771\tBI_GS_DEL1_B5_P1255_195\tA\t<CN0>\t100\tPASS\tAC=2171;AF=0.433506;AFR_AF=0.1505;AMR_AF=0.3991;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.627;END=16174073;EUR_AF=0.4165;MC=YL_CN_CEU_2045,YL_CN_MXL_1371,YL_CN_GIH_1263,SI_BD_7581,EM_DL_DEL88362,UW_VH_5820,YL_CN_GWD_2249;NS=2504;SAS_AF=0.6585;SVTYPE=DEL\tGT\t1|0\n7\t16936287\tDEL_pindel_21852\tTAGAAGTGATGAGAGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAACACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA\tT\t.\tPASS\tAC=3069;AF=0.612819;AFR_AF=0.5537;AMR_AF=0.6859;AN=5008;CS=DEL_pindel;EAS_AF=0.5605;END=16936626;EUR_AF=0.7117;MEINFO=AluYa1_2,1,281,+;NS=2504;SAS_AF=0.593;SITEPOST=0.9844;SVTYPE=DEL_ALU\tGT\t1|0\n7\t17969699\tDEL_pindel_21876\tTAAGAAAAAGAATAAAGAATAAGAATAAGAATAAAGAATAAAGAATAAGAATAAAGAAATAAGAATA\tT\t.\tPASS\tAC=2288;AF=0.456869;AFR_AF=0.4705;AMR_AF=0.5648;AN=5008;CS=DEL_pindel;EAS_AF=0.374;END=17969765;EUR_AF=0.5905;NS=2504;SAS_AF=0.3098;SITEPOST=0.9992;SVTYPE=DEL\tGT\t0|1\n7\t22434787\tUW_VH_11442\tG\t<CN0>\t100\tPASS\tAC=2517;AF=0.502596;AFR_AF=0.5242;AMR_AF=0.3833;AN=5008;CIEND=0,450;CIPOS=-703,0;CS=DEL_union;EAS_AF=0.5764;END=22436761;EUR_AF=0.4622;MC=UW_VH_21099,UW_VH_17066,UW_VH_2180,BI_GS_DEL1_B1_P1261_439,UW_VH_7864,EM_DL_DEL10989811,UW_VH_4284,UW_VH_9952,UW_VH_11639,YL_CN_YRI_2082,UW_VH_18955;NS=2504;SAS_AF=0.5235;SVTYPE=DEL\tGT\t1|0\n7\t24038171\tUW_VH_18963\tT\t<CN0>\t100\tPASS\tAC=3828;AF=0.764377;AFR_AF=0.8381;AMR_AF=0.6513;AN=5008;CIEND=0,532;CIPOS=-541,0;CS=DEL_union;EAS_AF=0.7907;END=24040063;EUR_AF=0.6551;MC=YL_CN_MSL_1539,YL_CN_CEU_2057,EM_DL_DEL10990297,UW_VH_21085,BI_GS_DEL1_B1_P1263_35,YL_CN_LWK_1573,UW_VH_616,YL_CN_KHV_1670,YL_CN_IBS_1434;NS=2504;SAS_AF=0.8303;SVTYPE=DEL\tGT\t1|1\n7\t25044601\tDEL_pindel_22008\tTGAGAAACTTTGGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAGAAAAAAAAGAAAAA\tT\t.\tPASS\tAC=3602;AF=0.719249;AFR_AF=0.7579;AMR_AF=0.7161;AN=5008;CS=DEL_pindel;EAS_AF=0.6915;END=25044930;EUR_AF=0.6571;MEINFO=AluYa4_5,1,281,+;NS=2504;SAS_AF=0.7618;SITEPOST=0.98405;SVTYPE=DEL_ALU\tGT\t1|0\n7\t28214282\tBI_GS_DEL1_B2_P1267_181\tT\t<CN0>\t100\tPASS\tAC=1062;AF=0.212061;AFR_AF=0.0711;AMR_AF=0.3401;AN=5008;CIEND=0,1;CIPOS=0,1;CS=DEL_union;EAS_AF=0.0149;END=28214660;EUR_AF=0.506;MC=DEL_pindel_22064,UW_VH_620;NS=2504;SAS_AF=0.2127;SVTYPE=DEL\tGT\t1|1\n7\t28574294\tBI_GS_DEL1_B1_P1267_560\tC\t<CN0>\t100\tPASS\tAC=790;AF=0.157748;AFR_AF=0.177;AMR_AF=0.1585;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.0764;END=28575147;EUR_AF=0.2584;MC=UW_VH_1329,UW_VH_11099;NS=2504;SAS_AF=0.1115;SVTYPE=DEL\tGT\t0|1\n7\t29476917\tDEL_pindel_22098\tTAAGATATCTAAAACCGGCTGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCATGAACCTGGGAGGCGGAGCTTGCAGTGAGCCGAGATCGCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAA\tT\t.\tPASS\tAC=935;AF=0.186701;AFR_AF=0.3495;AMR_AF=0.17;AN=5008;CS=DEL_pindel;EAS_AF=0.0625;END=29477227;EUR_AF=0.174;MEINFO=AluY,1,281,+;NS=2504;SAS_AF=0.1196;SITEPOST=0.9956;SVTYPE=DEL_ALU\tGT\t0|1\n7\t32286850\tDEL_pindel_22163\tGAATTGAAGCAGTGGCCACAGACCAGGTCTTGGGAGCCTAGGGCTTCTTGGCCAAACTCAAATTTTTTTATTTATTGTCTGTCTGTATGAGGGTAAGGGCTCCTGTCTTAAGCATTGCTGTGTCCTCAATGCCCAGGATAAGGAATGATACATGGCAAATTCTCTCAAGAATCATTTGTTAAGGCAATGAATTAATTTTATCCCAAAGGTGATGGGTGGGCCATAGTAAGCCCACTGAAGCAATGGGATAAAACTTGGCCTGGAAGAAGA\tG\t.\tPASS\tAC=474;AF=0.0946486;AFR_AF=0.1104;AMR_AF=0.0778;AN=5008;CS=DEL_pindel;EAS_AF=0.126;END=32287119;EUR_AF=0.0905;NS=2504;SAS_AF=0.0573;SITEPOST=1;SVTYPE=DEL\tGT\t1|0\n7\t32811206\tDEL_pindel_22181\tGGCAGAGCTGAGCATGCTTGGTTTATTCTCTGCAAATTCATGATGCATGGTTCA\tG\t.\tPASS\tAC=1016;AF=0.202875;AFR_AF=0.2231;AMR_AF=0.1499;AN=5008;CS=DEL_pindel;EAS_AF=0.122;END=32811259;EUR_AF=0.164;NS=2504;SAS_AF=0.3364;SITEPOST=0.9998;SVTYPE=DEL\tGT\t0|1\n7\t33712013\tDEL_pindel_22189\tTCCTTCCTTCCTTCCTTCCTTCCTTTCTTTCCTTCCTTCCTTCCTTCCTTCTTCCCTTCCTC\tT\t.\tPASS\tAC=3750;AF=0.748802;AFR_AF=0.6089;AMR_AF=0.7824;AN=5008;CS=DEL_pindel;EAS_AF=0.8155;END=33712074;EUR_AF=0.7654;NS=2504;SAS_AF=0.8282;SITEPOST=0.97935;SVTYPE=DEL\tGT\t1|1\n7\t33898841\tDEL_pindel_22194\tTTGAGCCTGGCTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCTTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC\tT\t.\tPASS\tAC=4274;AF=0.853435;AFR_AF=0.8177;AMR_AF=0.8876;AN=5008;CS=DEL_pindel;EAS_AF=0.8681;END=33899172;EUR_AF=0.8678;MEINFO=AluYa5,1,281,-;NS=2504;SAS_AF=0.8476;SITEPOST=0.9849;SVTYPE=DEL_ALU\tGT\t1|1\n7\t34492801\tALU_umary_ALU_5948\tT\t<INS:ME:ALU>\t.\t.\tAC=232;AF=0.0463259;AFR_AF=0.1407;AMR_AF=0.0216;AN=5008;CS=ALU_umary;EAS_AF=0;EUR_AF=0.0298;MEINFO=AluUndef,1,281,+;NS=2504;SAS_AF=0.001;SITEPOST=1;SVLEN=280;SVTYPE=ALU;TSD=AGAATTCTAGGGCT\tGT\t1|0\n7\t36878879\tDEL_pindel_22266\tAACATCTTTGTGGAATTACTCAGTTTTGGTGTCACTAAAGTCGGCCTCCATTCAAGCCCGTCTCCTCATGCTCTAGGTCTTCTGATTTAG\tA\t.\tPASS\tAC=1987;AF=0.396765;AFR_AF=0.2852;AMR_AF=0.4265;AN=5008;CS=DEL_pindel;EAS_AF=0.4524;END=36878968;EUR_AF=0.498;NS=2504;SAS_AF=0.365;SITEPOST=0.9996;SVTYPE=DEL\tGT\t1|1\n7\t37836651\tALU_umary_ALU_5967\tT\t<INS:ME:ALU>\t.\t.\tAC=2455;AF=0.490216;AFR_AF=0.4887;AMR_AF=0.4366;AN=5008;CS=ALU_umary;EAS_AF=0.5308;EUR_AF=0.503;MEINFO=AluUndef,1,280,-;NS=2504;SAS_AF=0.4755;SITEPOST=1;SVLEN=279;SVTYPE=ALU;TSD=TGCTCCCCTCTCTTT\tGT\t0|1\n7\t38116201\tALU_umary_ALU_5969\tT\t<INS:ME:ALU>\t.\t.\tAC=302;AF=0.0603035;AFR_AF=0.0008;AMR_AF=0.0259;AN=5008;CS=ALU_umary;EAS_AF=0.0903;EUR_AF=0.0636;MEINFO=AluYb7_2,1,270,-;NS=2504;SAS_AF=0.1309;SITEPOST=1;SVLEN=269;SVTYPE=ALU;TSD=CTTTGTCTTATTTTT\tGT\t0|1\n7\t39380342\tDEL_pindel_22275\tAGGTGCATTCATATATATATATATATATATATGACTTTAAACTTCAGAAAACCATTTTTAACTTAG\tA\t.\tPASS\tAC=2845;AF=0.568091;AFR_AF=0.5628;AMR_AF=0.5519;AN=5008;CS=DEL_pindel;EAS_AF=0.7431;END=39380407;EUR_AF=0.5577;NS=2504;SAS_AF=0.4172;SITEPOST=0.9999;SVTYPE=DEL\tGT\t0|1\n7\t39387270\tBI_GS_DEL1_B2_P1278_285\tA\t<CN0>\t100\tPASS\tAC=620;AF=0.123802;AFR_AF=0.084;AMR_AF=0.2248;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.0278;END=39387889;EUR_AF=0.2087;NS=2504;SAS_AF=0.1176;SVTYPE=DEL\tGT\t0|1\n7\t40879271\tINV_delly_INV00092650\tG\t<INV>\t.\tPASS\tAC=2443;AF=0.487819;AFR_AF=0.5038;AMR_AF=0.3991;AN=5008;CIEND=-209,209;CIPOS=-209,209;CS=INV_delly;EAS_AF=0.7827;END=40880479;EUR_AF=0.3668;IMPRECISE;NS=2504;SAS_AF=0.3497;SITEPOST=1;SVTYPE=INV\tGT\t1|0\n7\t42549700\tDEL_pindel_22344\tTAAAGAGGAATGAGCGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTGGTAGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCGCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCACAAAAAAAAAAAAAAAAAAAAAAAAA\tT\t.\tPASS\tAC=3362;AF=0.671326;AFR_AF=0.6536;AMR_AF=0.6412;AN=5008;CS=DEL_pindel;EAS_AF=0.7331;END=42550022;EUR_AF=0.5974;MEINFO=AluYc1,1,281,+;NS=2504;SAS_AF=0.729;SITEPOST=0.9796;SVTYPE=DEL_ALU\tGT\t1|0\n7\t47089458\tBI_GS_DEL1_B3_P1286_1\tT\t<CN0>\t100\tPASS\tAC=11;AF=0.00219649;AFR_AF=0;AMR_AF=0;AN=5008;CIEND=-36,36;CIPOS=-36,36;CS=DEL_union;EAS_AF=0;END=47092817;EUR_AF=0.0089;MC=SI_BD_7745,UW_VH_4545;NS=2504;SAS_AF=0.002;SVTYPE=DEL\tGT\t1|0\n7\t47219078\tDEL_pindel_22441\tTTGCAGCTTGGGATGTAAGCAGTAGGCTACATTTCCTTCTGCTGGGCATGTGCCACAGCCGCCCTGCAAGCCACTGTCTGAAGGGTGTCCCTCACTC\tT\t.\tPASS\tAC=672;AF=0.134185;AFR_AF=0.0295;AMR_AF=0.1282;AN=5008;CS=DEL_pindel;EAS_AF=0.2272;END=47219174;EUR_AF=0.1412;NS=2504;SAS_AF=0.1769;SITEPOST=0.9995;SVTYPE=DEL\tGT\t0|1\n7\t47551089\tALU_umary_ALU_6012\tA\t<INS:ME:ALU>\t.\t.\tAC=919;AF=0.183506;AFR_AF=0.0923;AMR_AF=0.2493;AN=5008;CS=ALU_umary;EAS_AF=0.2024;EUR_AF=0.2724;MEINFO=AluYd8,3,277,-;NS=2504;SAS_AF=0.1493;SITEPOST=1;SVLEN=274;SVTYPE=ALU;TSD=CTTAAATATTTTA\tGT\t1|0\n7\t49057624\tALU_umary_ALU_6021\tT\t<INS:ME:ALU>\t.\t.\tAC=2228;AF=0.444888;AFR_AF=0.5983;AMR_AF=0.4193;AN=5008;CS=ALU_umary;EAS_AF=0.2817;EUR_AF=0.4533;MEINFO=AluYc1,2,281,-;NS=2504;SAS_AF=0.4151;SITEPOST=1;SVLEN=279;SVTYPE=ALU;TSD=GCCTGTAGCTTGGTTCT\tGT\t1|0\n7\t49725896\tL1_umary_LINE1_1503\tC\t<INS:ME:LINE1>\t.\t.\tAC=2805;AF=0.560104;AFR_AF=0.6225;AMR_AF=0.4755;AN=5008;CS=L1_umary;EAS_AF=0.5456;EUR_AF=0.5378;MEINFO=LINE1,5545,5845,-;NS=2504;SAS_AF=0.5736;SITEPOST=0.9996;SVLEN=300;SVTYPE=LINE1;TSD=null\tGT\t0|1\n7\t50104763\tBI_GS_DEL1_B2_P1289_68\tC\t<CN0>\t100\tPASS\tAC=189;AF=0.0377396;AFR_AF=0.0832;AMR_AF=0.0231;AN=5008;CIEND=0,1;CIPOS=0,1;CS=DEL_union;EAS_AF=0;END=50106067;EUR_AF=0.0547;MC=SI_BD_7759,UW_VH_2223;NS=2504;SAS_AF=0.0082;SVTYPE=DEL\tGT\t0|1\n7\t51081675\tDEL_pindel_22528\tAGGCTCTGGCGCTTGGTTAGCTCTGAGGTCAGTGTAAGGAAGAGGGGAACAGGTCAGAG\tA\t.\tPASS\tAC=1487;AF=0.296925;AFR_AF=0.0446;AMR_AF=0.33;AN=5008;CS=DEL_pindel;EAS_AF=0.3234;END=51081733;EUR_AF=0.5139;NS=2504;SAS_AF=0.364;SITEPOST=0.9996;SVTYPE=DEL\tGT\t1|0\n7\t51594315\tUW_VH_10840\tT\t<CN0>\t100\tPASS\tAC=2682;AF=0.535543;AFR_AF=0.4637;AMR_AF=0.5432;AN=5008;CIEND=0,396;CIPOS=-524,0;CS=DEL_union;EAS_AF=0.5893;END=51598689;EUR_AF=0.505;MC=EM_DL_DEL89966,UW_VH_11111,UW_VH_20840,SI_BD_7763,YL_CN_CLM_1409,UW_VH_2971;NS=2504;SAS_AF=0.6033;SVTYPE=DEL\tGT\t1|0\n7\t52094962\tDEL_pindel_22566\tTAAAAAATGACAGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACACGGTGAAACCCCGTCTCTACTAAAATTACAAAAAATTAGCCGGGCGTGGTAGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCGCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAA\tT\t.\tPASS\tAC=3752;AF=0.749201;AFR_AF=0.5817;AMR_AF=0.781;AN=5008;CS=DEL_pindel;EAS_AF=0.8115;END=52095275;EUR_AF=0.833;MEINFO=AluYc1,1,281,+;NS=2504;SAS_AF=0.8027;SITEPOST=0.9744;SVTYPE=DEL_ALU\tGT\t0|1\n7\t52107107\tDEL_pindel_22567\tGAAAAGTAAAAGTTGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGATGGGAGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTGACACGGTGAAACCCCGTCTCTACTAAAAATACAAAAATTAGCCGGGCATGGTGGCGCGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGTCGAGATCGCGCCACTGCGCTCCAGCCTGGGCGACAGAGCGAAACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAC\tG\t.\tPASS\tAC=2174;AF=0.434105;AFR_AF=0.3048;AMR_AF=0.4524;AN=5008;CS=DEL_pindel;EAS_AF=0.6111;END=52107424;EUR_AF=0.4254;MEINFO=AluYg5b3,1,281,+;NS=2504;SAS_AF=0.4223;SITEPOST=0.9927;SVTYPE=DEL_ALU\tGT\t1|0\n7\t52520168\tBI_GS_DEL1_B5_P1291_589\tT\t<CN0>\t100\tPASS\tAC=2343;AF=0.467851;AFR_AF=0.1717;AMR_AF=0.4726;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.7401;END=52520372;EUR_AF=0.5209;MC=UW_VH_2070,DEL_pindel_22574;NS=2504;SAS_AF=0.5297;SVTYPE=DEL\tGT\t1|0\n7\t53652516\tL1_umary_LINE1_1510\tA\t<INS:ME:LINE1>\t.\t.\tAC=632;AF=0.126198;AFR_AF=0.0219;AMR_AF=0.1571;AN=5008;CS=L1_umary;EAS_AF=0.0992;EUR_AF=0.2197;MEINFO=LINE1,1,6016,-;NS=2504;SAS_AF=0.1769;SITEPOST=1;SVLEN=6015;SVTYPE=LINE1;TSD=TTATTTGTTTTTTTA\tGT\t0|1\n7\t56244918\tALU_umary_ALU_6061\tC\t<INS:ME:ALU>\t.\t.\tAC=2157;AF=0.430711;AFR_AF=0.5015;AMR_AF=0.4496;AN=5008;CS=ALU_umary;EAS_AF=0.253;EUR_AF=0.493;MEINFO=AluYb6_2,16,270,+;NS=2504;SAS_AF=0.4407;SITEPOST=1;SVLEN=254;SVTYPE=ALU;TSD=AAAAGTAATCATCAC\tGT\t1|1\n7\t56435784\tYL_CN_IBS_1466\tG\t<CN0>\t100\tPASS\tAC=3046;AF=0.608227;AFR_AF=0.6641;AMR_AF=0.5418;AN=5008;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0.627;END=56438107;EUR_AF=0.6113;MC=YL_CN_PJL_1707;NS=2504;SAS_AF=0.5573;SVTYPE=DEL\tGT\t1|1\n7\t57164992\tYL_CN_FIN_1575\tC\t<CN0>\t100\tPASS\tAC=12;AF=0.00239617;AFR_AF=0;AMR_AF=0.0029;AN=5008;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0;END=57173720;EUR_AF=0.0099;MC=UW_VH_5072,BI_GS_DEL1_B1_P1296_7;NS=2504;SAS_AF=0;SVTYPE=DEL\tGT\t0|1\n7\t57957715\tEM_DL_DEL101005203\tA\t<CN0>\t100\tPASS\tAC=2294;AF=0.458067;AFR_AF=0.3971;AMR_AF=0.6513;AN=5008;CIEND=-150,150;CIPOS=-150,150;CS=DEL_union;EAS_AF=0.2927;END=57959407;EUR_AF=0.5268;MC=YL_CN_CEU_2119,YL_CN_CDX_1403,YL_CN_CHB_1672,YL_CN_MSL_1586,YL_CN_MXL_1410,YL_CN_BEB_1432;NS=2504;SAS_AF=0.5031;SVTYPE=DEL\tGT\t1|0\n7\t61510866\tYL_CN_ESN_1740\tT\t<CN0>\t100\tPASS\tAC=962;AF=0.192093;AFR_AF=0.1626;AMR_AF=0.1282;AN=5008;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0.1756;END=61515334;EUR_AF=0.2624;NS=2504;SAS_AF=0.2219;SVTYPE=DEL\tGT\t1|0\n7\t61971096\tYL_CN_CDX_1416\tT\t<CN0>\t100\tPASS\tAC=2870;AF=0.573083;AFR_AF=0.5923;AMR_AF=0.683;AN=5008;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0.5456;END=61975635;EUR_AF=0.508;MC=YL_CN_GIH_1309,YL_CN_STU_1647;NS=2504;SAS_AF=0.5644;SVTYPE=DEL\tGT\t1|0\n7\t62002293\tBI_GS_DEL1_B1_P1301_1\tA\t<CN0>\t100\tPASS\tAC=2300;AF=0.459265;AFR_AF=0.4342;AMR_AF=0.6441;AN=5008;CIEND=-4,4;CIPOS=-4,4;CS=DEL_union;EAS_AF=0.3452;END=62004875;EUR_AF=0.4751;MC=YL_CN_CHS_1696;NS=2504;SAS_AF=0.4632;SVTYPE=DEL\tGT\t1|0\n7\t62366086\tBI_GS_DEL1_B5_P1301_79\tA\t<CN0>\t100\tPASS\tAC=1562;AF=0.311901;AFR_AF=0.3578;AMR_AF=0.2493;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.2302;END=62369684;EUR_AF=0.3867;MC=YL_CN_MSL_1604;NS=2504;SAS_AF=0.3016;SVTYPE=DEL\tGT\t0|1\n7\t64413378\tBI_GS_DEL1_B2_P1303_257\tT\t<CN0>\t100\tPASS\tAC=1606;AF=0.320687;AFR_AF=0.1687;AMR_AF=0.2507;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.3978;END=64414031;EUR_AF=0.3986;MC=UW_VH_2071,SI_BD_7842;NS=2504;SAS_AF=0.4162;SVTYPE=DEL\tGT\t0|1\n7\t65589712\tUW_VH_1791\tC\t<CN0>\t100\tPASS\tAC=399;AF=0.0796725;AFR_AF=0.0061;AMR_AF=0.1009;AN=5008;CIEND=0,416;CIPOS=-399,0;CS=DEL_union;EAS_AF=0.1111;END=65591959;EUR_AF=0.1173;MC=SI_BD_7852,BI_GS_DEL1_B1_P1304_272,YL_CN_ITU_1695,YL_CN_STU_1681,EM_DL_DEL90944;NS=2504;SAS_AF=0.093;SVTYPE=DEL\tGT\t0|1\n7\t66755275\tSI_BD_7863\tT\t<CN0>\t100\tPASS\tAC=362;AF=0.0722843;AFR_AF=0.059;AMR_AF=0.0591;AN=5008;CIEND=-50,140;CIPOS=-140,50;CS=DEL_union;EAS_AF=0.003;END=66756602;EUR_AF=0.1441;NS=2504;SAS_AF=0.0971;SVTYPE=DEL\tGT\t1|0\n7\t67113327\tDEL_pindel_22704\tCGCAGTAGAGGTCTCTAGCAAAGATCTCTTTTAAATACCATAGTTTTTGAAAATGACAGATGCAGATGAAACACTTCAATGTTTAATGTCAAAGTTAATGAAAAATATAATTTGAAGGCAAGAGTG\tC\t.\tPASS\tAC=1680;AF=0.335463;AFR_AF=0.3533;AMR_AF=0.3141;AN=5008;CS=DEL_pindel;EAS_AF=0.3889;END=67113452;EUR_AF=0.2684;NS=2504;SAS_AF=0.3405;SITEPOST=0.9993;SVTYPE=DEL\tGT\t1|1\n7\t68462070\tDEL_pindel_22749\tTAAAAAGAAACCCAGGCCGGGCGCGGTGGCTCACGCCTCTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAA\tT\t.\tPASS\tAC=3252;AF=0.649361;AFR_AF=0.4357;AMR_AF=0.6729;AN=5008;CS=DEL_pindel;EAS_AF=0.7679;END=68462389;EUR_AF=0.7237;MEINFO=AluYa5,1,281,+;NS=2504;SAS_AF=0.7229;SITEPOST=0.9848;SVTYPE=DEL_ALU\tGT\t1|1\n7\t70188702\tL1_umary_LINE1_1523\tT\t<INS:ME:LINE1>\t.\t.\tAC=1398;AF=0.279153;AFR_AF=0.0893;AMR_AF=0.3357;AN=5008;CS=L1_umary;EAS_AF=0.5308;EUR_AF=0.1909;MEINFO=LINE1,5670,6018,-;NS=2504;SAS_AF=0.3272;SITEPOST=1;SVLEN=348;SVTYPE=LINE1;TSD=GTAGCTCTGCTCTTATTTATGTATTTT\tGT\t1|0\n7\t71211920\tUW_VH_15640\tC\t<CN0>\t100\tPASS\tAC=4486;AF=0.895767;AFR_AF=0.9637;AMR_AF=0.8905;AN=5008;CIEND=0,553;CIPOS=-510,0;CS=DEL_union;EAS_AF=0.9137;END=71212966;EUR_AF=0.834;MC=UW_VH_6271;NS=2504;SAS_AF=0.8528;SVTYPE=DEL\tGT\t0|1\n7\t72270263\tBI_GS_DEL1_B1_P1311_137\tT\t<CN0>\t100\tPASS\tAC=1965;AF=0.392372;AFR_AF=0.4584;AMR_AF=0.3545;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.5526;END=72275846;EUR_AF=0.2416;MC=SI_BD_7894,YL_CN_ASW_1806,EM_DL_DEL91245,UW_VH_9613;NS=2504;SAS_AF=0.32;SVTYPE=DEL\tGT\t1|1\n7\t73549765\tUW_VH_643\tG\t<CN0>\t100\tPASS\tAC=3090;AF=0.617013;AFR_AF=0.4902;AMR_AF=0.6614;AN=5008;CIEND=0,468;CIPOS=-449,0;CS=DEL_union;EAS_AF=0.7887;END=73550955;EUR_AF=0.6292;MC=SI_BD_7903,YL_CN_CHB_1719,YL_CN_FIN_1620,YL_CN_MSL_1631,YL_CN_PUR_2070,YL_CN_LWK_1667,YL_CN_KHV_1764,YL_CN_CDX_1450,YL_CN_GWD_2393,YL_CN_ACB_1982,BI_GS_DEL1_B1_P1312_306,YL_CN_TSI_1625,YL_CN_YRI_2202,YL_CN_JPT_1873,YL_CN_GBR_1663,YL_CN_CEU_2184,YL_CN_STU_1691,YL_CN_PJL_1780,YL_CN_CLM_1475,YL_CN_PEL_1538,YL_CN_CHS_1736,YL_CN_ITU_1704;NS=2504;SAS_AF=0.5675;SVTYPE=DEL\tGT\t1|1\n7\t73828493\tUW_VH_14202\tG\t<CN0>\t100\tPASS\tAC=3526;AF=0.704073;AFR_AF=0.767;AMR_AF=0.6081;AN=5008;CIEND=0,462;CIPOS=-555,0;CS=DEL_union;EAS_AF=0.7698;END=73831271;EUR_AF=0.662;MC=YL_CN_LWK_1668,YL_CN_MXL_1447,UW_VH_24703,UW_VH_644,BI_GS_DEL1_B1_P1312_436,UW_VH_6232,UW_VH_5263,EM_DL_DEL91299,UW_VH_6730,YL_CN_CHS_1737,YL_CN_ASW_1809,YL_CN_CHB_1722;NS=2504;SAS_AF=0.6626;SVTYPE=DEL\tGT\t1|1\n7\t74772350\tUW_VH_25441\tA\t<CN0>\t100\tPASS\tAC=4163;AF=0.83127;AFR_AF=0.4697;AMR_AF=0.9337;AN=5008;CIEND=0,41;CIPOS=-38,0;CS=DEL_union;EAS_AF=0.9861;END=74774220;EUR_AF=0.9423;NS=2504;SAS_AF=0.9734;SVTYPE=DEL\tGT\t0|1\n7\t76144788\tDUP_gs_CNV_7_76144788_76157013\tC\t<CN0>,<CN2>\t.\tPASS\tAC=3299,7;AF=0.658746,0.00139776;AFR_AF=0.7867,0.003;AMR_AF=0.6167,0.0014;AN=5008;CS=DUP_gs;EAS_AF=0.5585,0.002;END=76157013;EUR_AF=0.5954,0;MC=BI_GS_DEL1_B2_P1315_38;NS=2504;SAS_AF=0.684,0;SITEPOST=1;SVTYPE=CNV\tGT\t0|1\n7\t76567224\tALU_umary_ALU_6114\tT\t<INS:ME:ALU>\t.\t.\tAC=2336;AF=0.466454;AFR_AF=0.472;AMR_AF=0.3948;AN=5008;CS=ALU_umary;EAS_AF=0.4593;EUR_AF=0.5795;MEINFO=AluUndef,1,272,-;NS=2504;SAS_AF=0.4008;SITEPOST=1;SVLEN=271;SVTYPE=ALU;TSD=TGGCTATTTCTT\tGT\t1|1\n7\t76702227\tUW_VH_1793\tT\t<CN0>\t100\tPASS\tAC=271;AF=0.0541134;AFR_AF=0.0053;AMR_AF=0.0663;AN=5008;CIEND=0,329;CIPOS=-321,0;CS=DEL_union;EAS_AF=0.0169;END=76708169;EUR_AF=0.1531;MC=BI_GS_DEL1_B2_P1315_169,YL_CN_STU_1716,EM_DL_DEL91564,SI_BD_7932;NS=2504;SAS_AF=0.0481;SVTYPE=DEL\tGT\t0|1\n7\t76870544\tUW_VH_646\tT\t<CN0>\t100\tPASS\tAC=2519;AF=0.502995;AFR_AF=0.205;AMR_AF=0.5735;AN=5008;CIEND=0,511;CIPOS=-464,0;CS=DEL_union;EAS_AF=0.4563;END=76870797;EUR_AF=0.6948;MC=BI_GS_DEL1_B2_P1315_239;NS=2504;SAS_AF=0.7065;SVTYPE=DEL\tGT\t1|1\n7\t79742076\tDEL_pindel_22937\tTCAATCCCAATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGTCGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC\tT\t.\tPASS\tAC=3660;AF=0.730831;AFR_AF=0.6846;AMR_AF=0.7406;AN=5008;CS=DEL_pindel;EAS_AF=0.7917;END=79742408;EUR_AF=0.7048;MEINFO=AluYb6_2,1,281,-;NS=2504;SAS_AF=0.7505;SITEPOST=0.96975;SVTYPE=DEL_ALU\tGT\t1|0\n7\t81358341\tBI_GS_DEL1_B3_P1320_15\tC\t<CN0>\t100\tPASS\tAC=3917;AF=0.782149;AFR_AF=0.6815;AMR_AF=0.8314;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.8532;END=81358609;EUR_AF=0.7634;MC=DEL_pindel_22973;NS=2504;SAS_AF=0.8292;SVTYPE=DEL\tGT\t0|1\n7\t81728727\tDEL_pindel_22979\tAGCAATACCTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGCGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACAGGGTTTCACCGTGTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC\tA\t.\tPASS\tAC=1731;AF=0.345647;AFR_AF=0.2784;AMR_AF=0.3919;AN=5008;CS=DEL_pindel;EAS_AF=0.3552;END=81729064;EUR_AF=0.3807;MEINFO=AluYa4_1,1,281,-;NS=2504;SAS_AF=0.3579;SITEPOST=0.9998;SVTYPE=DEL_ALU\tGT\t0|1\n7\t83050175\tBI_GS_DEL1_B4_P1322_13\tC\t<CN0>\t100\tPASS\tAC=733;AF=0.146366;AFR_AF=0.1271;AMR_AF=0.1455;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.005;END=83051201;EUR_AF=0.2525;MC=UW_VH_2225,SI_BD_7965;NS=2504;SAS_AF=0.2096;SVTYPE=DEL\tGT\t0|1\n7\t84901725\tL1_umary_LINE1_1534\tT\t<INS:ME:LINE1>\t.\t.\tAC=2095;AF=0.418331;AFR_AF=0.4085;AMR_AF=0.428;AN=5008;CS=L1_umary;EAS_AF=0.3214;EUR_AF=0.5537;MEINFO=LINE1,5785,6016,-;NS=2504;SAS_AF=0.3855;SITEPOST=1;SVLEN=231;SVTYPE=LINE1;TSD=TT\tGT\t0|1\n7\t88091299\tDEL_pindel_23091\tAACAATATTTTTTTTTTTTTTTTTTAGTATTTGATTGTGTATTTATACCACATTTTCTTTATTTTTTTTTTCTTTTTTTTTTTTTTTTATTATACTCTCAGTTTTAGGGTACATGTGCACATTGTGCAGGTTAGTTACATATGTATACATGTGCCATGCTGGTGCGCTGCACCCACTAATGTGTCATCTAGCATTAGGTATATCTCCCAATGCTATCCCTCCCCCCTCCCCCGACCCCACCACAGTCCCCAGAGTGTGATATTCCCCTTCCTGTGTCCATGTGATCTCATTGTTCAATTCCCACCTATGAGTGAGAATATGCGGTGTTTGGTTTTTTGTTCTTGCGATAGTTTACTGAGAATGATGGTTTCCAATTTCATCCATGTCCCTACAAAGGATATGAACTCATCATTTTTTATGGCTGCATAGTATTCCATGGTGTATATGTGCC\tA\t.\tPASS\tAC=4045;AF=0.807708;AFR_AF=0.6982;AMR_AF=0.8674;AN=5008;CS=DEL_pindel;EAS_AF=0.8274;END=88091749;EUR_AF=0.8658;MEINFO=LINE1,5660,6019,-;NS=2504;SAS_AF=0.8333;SITEPOST=0.9978;SVTYPE=DEL_LINE1\tGT\t0|1\n7\t89598872\tDEL_pindel_23127\tGGACCTTATTCTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCAGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC\tG\t.\tPASS\tAC=3403;AF=0.679513;AFR_AF=0.6838;AMR_AF=0.6772;AN=5008;CS=DEL_pindel;EAS_AF=0.7649;END=89599188;EUR_AF=0.6024;MEINFO=AluYa4_5,1,281,-;NS=2504;SAS_AF=0.6667;SITEPOST=0.9942;SVTYPE=DEL_ALU\tGT\t1|1\n7\t90022137\tDEL_pindel_23139\tTAAAAGAATCTGGAGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAATGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGTGCCTTTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAGAAAAAAAAAAAAAAAAAAA\tT\t.\tPASS\tAC=903;AF=0.180312;AFR_AF=0.2421;AMR_AF=0.1772;AN=5008;CS=DEL_pindel;EAS_AF=0.1081;END=90022454;EUR_AF=0.1581;MEINFO=AluYa5,1,281,+;NS=2504;SAS_AF=0.1963;SITEPOST=0.9998;SVTYPE=DEL_ALU\tGT\t0|1\n7\t90583932\tDEL_pindel_23152\tTCTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTATCACCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGGTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC\tT\t.\tPASS\tAC=3326;AF=0.664137;AFR_AF=0.6203;AMR_AF=0.696;AN=5008;CS=DEL_pindel;EAS_AF=0.6409;END=90584239;EUR_AF=0.7068;MEINFO=AluYa5,1,281,-;NS=2504;SAS_AF=0.681;SITEPOST=0.93585;SVTYPE=DEL_ALU\tGT\t0|1\n7\t91214111\tYL_CN_CDX_1479\tA\t<CN0>\t100\tPASS\tAC=2536;AF=0.50639;AFR_AF=0.7882;AMR_AF=0.3415;AN=5008;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0.494;END=91220934;EUR_AF=0.2942;NS=2504;SAS_AF=0.4734;SVTYPE=DEL\tGT\t1|0\n7\t93416961\tUW_VH_659\tT\t<CN0>\t100\tPASS\tAC=3090;AF=0.617013;AFR_AF=0.5575;AMR_AF=0.6801;AN=5008;CIEND=0,529;CIPOS=-590,0;CS=DEL_union;EAS_AF=0.6915;END=93422984;EUR_AF=0.6412;MC=YL_CN_CHS_1765,BI_GS_DEL1_B5_P1332_499,YL_CN_CHB_1755,YL_CN_GIH_1371,YL_CN_ESN_1819,YL_CN_MXL_1477,YL_CN_GBR_1697,YL_CN_IBS_1555,YL_CN_CDX_1482,YL_CN_PJL_1822,YL_CN_PUR_2115,YL_CN_FIN_1660;MEINFO=LINE1,8,6019,-;NS=2504;SAS_AF=0.5511;SVTYPE=DEL_LINE1\tGT\t1|1\n7\t93541824\tBI_GS_DEL1_B3_P1332_24\tC\t<CN0>\t100\tPASS\tAC=2864;AF=0.571885;AFR_AF=0.3351;AMR_AF=0.6095;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.7401;END=93542540;EUR_AF=0.675;MC=UW_VH_660,SI_BD_8012;NS=2504;SAS_AF=0.5859;SVTYPE=DEL\tGT\t1|0\n7\t94877512\tALU_umary_ALU_6216\tT\t<INS:ME:ALU>\t.\t.\tAC=1615;AF=0.322484;AFR_AF=0.3328;AMR_AF=0.2507;AN=5008;CS=ALU_umary;EAS_AF=0.3065;EUR_AF=0.3211;MEINFO=AluUndef,34,281,-;NS=2504;SAS_AF=0.3773;SITEPOST=1;SVLEN=247;SVTYPE=ALU;TSD=TAAAAATATATTTT\tGT\t1|0\n7\t95386253\tDEL_pindel_23233\tACTCATTGGATTTGTTTTTTTTTGTTTTTTTTTGTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGCGATCTCGGCTCATTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCCTCTG\tA\t.\tPASS\tAC=3958;AF=0.790335;AFR_AF=0.8699;AMR_AF=0.647;AN=5008;CS=DEL_pindel;EAS_AF=0.8958;END=95386584;EUR_AF=0.6233;MEINFO=AluYa4_5,1,281,-;NS=2504;SAS_AF=0.8476;SITEPOST=0.9992;SVTYPE=DEL_ALU\tGT\t0|1\n7\t96067512\tDEL_pindel_23243\tTAAGAATTCCGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACTCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGCGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCCGGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAA\tT\t.\tPASS\tAC=3610;AF=0.720847;AFR_AF=0.7209;AMR_AF=0.7536;AN=5008;CS=DEL_pindel;EAS_AF=0.7569;END=96067827;EUR_AF=0.7485;MEINFO=AluYb6_2,1,281,+;NS=2504;SAS_AF=0.6319;SITEPOST=0.9961;SVTYPE=DEL_ALU\tGT\t1|1\n7\t96543286\tUW_VH_1796\tT\t<CN0>\t100\tPASS\tAC=1163;AF=0.232228;AFR_AF=0.2254;AMR_AF=0.2723;AN=5008;CIEND=0,404;CIPOS=-463,0;CS=DEL_union;EAS_AF=0.1052;END=96546589;EUR_AF=0.3131;MC=SI_BD_8020,EM_DL_DEL92073,BI_GS_DEL1_B1_P1335_483,YL_CN_CDX_1485;NS=2504;SAS_AF=0.2607;SVTYPE=DEL\tGT\t1|0\n7\t99146666\tALU_umary_ALU_6237\tG\t<INS:ME:ALU>\t.\t.\tAC=2418;AF=0.482827;AFR_AF=0.4849;AMR_AF=0.4654;AN=5008;CS=ALU_umary;EAS_AF=0.5099;EUR_AF=0.4911;MEINFO=AluUndef,2,239,-;NS=2504;SAS_AF=0.456;SITEPOST=1;SVLEN=237;SVTYPE=ALU;TSD=GCCTGG\tGT\t1|0\n7\t100327576\tUW_VH_4850\tC\t<CN0>\t100\tPASS\tAC=884;AF=0.176518;AFR_AF=0.1815;AMR_AF=0.1859;AN=5008;CIEND=0,543;CIPOS=-325,0;CS=DEL_union;EAS_AF=0.1448;END=100340737;EUR_AF=0.2376;MC=UW_VH_21138,EM_DL_DEL92425,SI_BD_8040,YL_CN_CLM_1511,UW_VH_2558,BI_GS_DEL1_B5_P1339_240;NS=2504;SAS_AF=0.1329;SVTYPE=DEL\tGT\t1|0\n7\t101059153\tBI_GS_DEL1_B4_P1340_10\tA\t<CN0>\t100\tPASS\tAC=638;AF=0.127396;AFR_AF=0.0514;AMR_AF=0.1441;AN=5008;CIEND=0,1;CIPOS=0,1;CS=DEL_union;EAS_AF=0.004;END=101060267;EUR_AF=0.2724;MC=UW_VH_23,EM_DL_DEL101021189;NS=2504;SAS_AF=0.1963;SVTYPE=DEL\tGT\t1|1\n7\t101334195\tDEL_pindel_23337\tACACCTGGCTCATTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC\tA\t.\tPASS\tAC=3191;AF=0.637181;AFR_AF=0.6286;AMR_AF=0.6441;AN=5008;CS=DEL_pindel;EAS_AF=0.6587;END=101334515;EUR_AF=0.6362;MEINFO=AluYa5,1,281,-;NS=2504;SAS_AF=0.6227;SITEPOST=0.95865;SVTYPE=DEL_ALU\tGT\t1|0\n7\t102366705\tUW_VH_1798\tT\t<CN0>\t100\tPASS\tAC=278;AF=0.0555112;AFR_AF=0.1445;AMR_AF=0.0418;AN=5008;CIEND=0,342;CIPOS=-358,0;CS=DEL_union;EAS_AF=0.002;END=102374343;EUR_AF=0.0447;MC=BI_GS_DEL1_B2_P1341_75,SI_BD_8062,YL_CN_ESN_1836;NS=2504;SAS_AF=0.0112;SVTYPE=DEL\tGT\t1|0\n7\t103874937\tDEL_pindel_23368\tCAAAAGCCTTCCTCAGGCCGGGTGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCAGCTAAAACGGTGAAACCCTGTCTCTACTAAAAATAAAAAAATTAGCCAGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAA\tC\t.\tPASS\tAC=2414;AF=0.482029;AFR_AF=0.4607;AMR_AF=0.5346;AN=5008;CS=DEL_pindel;EAS_AF=0.5308;END=103875244;EUR_AF=0.3877;MEINFO=AluYa5,1,281,+;NS=2504;SAS_AF=0.5204;SITEPOST=0.9951;SVTYPE=DEL_ALU\tGT\t1|0\n7\t104129515\tDEL_pindel_23373\tTGTGCTGAAATCTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCATTGCAAGCTCCACCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTG\tT\t.\tPASS\tAC=1925;AF=0.384385;AFR_AF=0.3268;AMR_AF=0.4006;AN=5008;CS=DEL_pindel;EAS_AF=0.3313;END=104129796;EUR_AF=0.5417;MEINFO=AluY,35,281,-;NS=2504;SAS_AF=0.3436;SITEPOST=0.9998;SVTYPE=DEL_ALU\tGT\t1|0\n7\t104187384\tDEL_pindel_23375\tTAAGAAATAGTAGCTCAAGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGCGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCCGGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAA\tT\t.\tPASS\tAC=2314;AF=0.462061;AFR_AF=0.4289;AMR_AF=0.4611;AN=5008;CS=DEL_pindel;EAS_AF=0.4573;END=104187715;EUR_AF=0.5268;MEINFO=AluYb6_2,1,281,+;NS=2504;SAS_AF=0.4458;SITEPOST=0.9984;SVTYPE=DEL_ALU\tGT\t0|1\n7\t104204602\tDEL_pindel_23377\tCTGACAGAATCAGGATTTTCACTTATGTTTGTTTCACTTAAAACCTATGCCCATAACACCATGTTATGGGTTCTATTACCACTGCTTCTACTGAATGATGTTTGGAGGACTGAGTTAGGGTCTTAGCTTTGCTAATCACATCCCAGATGCAGTAATTCTTGATATAG\tC\t.\tPASS\tAC=1;AF=0.00019968;AFR_AF=0;AMR_AF=0;AN=5008;CS=DEL_pindel;EAS_AF=0;END=104204768;EUR_AF=0.001;NS=2504;SAS_AF=0;SITEPOST=0.9987;SVTYPE=DEL\tGT\t0|1\n7\t107464069\tBI_GS_DEL1_B4_P1346_101\tA\t<CN0>\t100\tPASS\tAC=1304;AF=0.260383;AFR_AF=0.0809;AMR_AF=0.3084;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.4742;END=107464744;EUR_AF=0.2167;MC=DEL_pindel_23462,SI_BD_8091,UW_VH_1484;NS=2504;SAS_AF=0.2935;SVTYPE=DEL\tGT\t1|0\n7\t107818074\tDEL_pindel_23466\tATATATATATATATATATATATATATATATATGTATATACGTGTATATATATACGTGTATATATATATACACGTATATATATATATACGTGTG\tA\t.\tPASS\tAC=3262;AF=0.651358;AFR_AF=0.3328;AMR_AF=0.7594;AN=5008;CS=DEL_pindel;EAS_AF=0.8571;END=107818166;EUR_AF=0.7376;NS=2504;SAS_AF=0.7045;SITEPOST=0.9813;SVTYPE=DEL\tGT\t1|1\n7\t107829263\tL1_umary_LINE1_1566\tA\t<INS:ME:LINE1>\t.\t.\tAC=2763;AF=0.551717;AFR_AF=0.3442;AMR_AF=0.5965;AN=5008;CS=L1_umary;EAS_AF=0.756;EUR_AF=0.5875;MEINFO=LINE1,1,6019,-;NS=2504;SAS_AF=0.5532;SITEPOST=1;SVLEN=6018;SVTYPE=LINE1;TSD=TAAATTTTAGTGGAA\tGT\t0|1\n7\t108352846\tDEL_pindel_23477\tCAAGAGGAAAGAGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGCGGTGGCGGGCGCCTGTAGCCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCCGACCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAA\tC\t.\tPASS\tAC=2248;AF=0.448882;AFR_AF=0.6377;AMR_AF=0.4971;AN=5008;CS=DEL_pindel;EAS_AF=0.1746;END=108353171;EUR_AF=0.4712;MEINFO=AluYb6_2,1,281,+;NS=2504;SAS_AF=0.4192;SITEPOST=0.9988;SVTYPE=DEL_ALU\tGT\t1|0\n7\t108501444\tDEL_pindel_23480\tGCTTGATTTAATCTAGGTAATTCAGAAGTAATCTAGCCTCTGAATTTTTCTGTGTTTGTTTTGCTTCATTTGTTTACGAGGGAGTGAATCTTCATCCTAATC\tG\t.\tPASS\tAC=3845;AF=0.767772;AFR_AF=0.323;AMR_AF=0.8991;AN=5008;CS=DEL_pindel;EAS_AF=0.9286;END=108501545;EUR_AF=0.9344;NS=2504;SAS_AF=0.9387;SITEPOST=0.9999;SVTYPE=DEL\tGT\t1|1\n7\t109283352\tALU_umary_ALU_6283\tT\t<INS:ME:ALU>\t.\t.\tAC=1440;AF=0.28754;AFR_AF=0.0567;AMR_AF=0.3588;AN=5008;CS=ALU_umary;EAS_AF=0.4107;EUR_AF=0.4205;MEINFO=AluUndef,1,244,+;NS=2504;SAS_AF=0.2853;SITEPOST=1;SVLEN=243;SVTYPE=ALU;TSD=AAAAGACCATTAGT\tGT\t0|1\n7\t109436701\tSI_BD_8097\tG\t<CN0>\t100\tPASS\tAC=1193;AF=0.238219;AFR_AF=0.1127;AMR_AF=0.4337;AN=5008;CIEND=-130,234;CIPOS=-234,98;CS=DEL_union;EAS_AF=0.2401;END=109453942;EUR_AF=0.3549;MC=EM_DL_DEL92814,BI_GS_DEL1_B1_P1348_330,YL_CN_ITU_1761;NS=2504;SAS_AF=0.1472;SVTYPE=DEL\tGT\t1|1\n7\t110181927\tUW_VH_15286\tT\t<CN0>\t100\tPASS\tAC=1110;AF=0.221645;AFR_AF=0.2254;AMR_AF=0.2536;AN=5008;CIEND=0,442;CIPOS=-439,0;CS=DEL_union;EAS_AF=0.1409;END=110188432;EUR_AF=0.3151;MC=UW_VH_3882,BI_GS_DEL1_B2_P1349_117,UW_VH_671,UW_VH_19448,EM_DL_DEL92830,SI_BD_8102,YL_CN_BEB_1513;NS=2504;SAS_AF=0.181;SVTYPE=DEL\tGT\t0|1\n7\t110484750\tL1_umary_LINE1_1572\tT\t<INS:ME:LINE1>\t.\t.\tAC=1734;AF=0.346246;AFR_AF=0.3396;AMR_AF=0.2507;AN=5008;CS=L1_umary;EAS_AF=0.4157;EUR_AF=0.2903;MEINFO=LINE1,5937,6019,+;NS=2504;SAS_AF=0.409;SITEPOST=1;SVLEN=82;SVTYPE=LINE1;TSD=null\tGT\t0|1\n7\t111065333\tBI_GS_DEL1_B4_P1350_9\tC\t<CN0>\t100\tPASS\tAC=108;AF=0.0215655;AFR_AF=0.0348;AMR_AF=0.0303;AN=5008;CIEND=-2,3;CIPOS=-2,3;CS=DEL_union;EAS_AF=0.004;END=111067265;EUR_AF=0.0298;MC=UW_VH_2383,SI_BD_8111;NS=2504;SAS_AF=0.0072;SVTYPE=DEL\tGT\t1|0\n7\t114956601\tALU_umary_ALU_6307\tT\t<INS:ME:ALU>\t.\t.\tAC=450;AF=0.0898562;AFR_AF=0.1354;AMR_AF=0.085;AN=5008;CS=ALU_umary;EAS_AF=0.0298;EUR_AF=0.1233;MEINFO=AluYa5,1,281,-;NS=2504;SAS_AF=0.0593;SITEPOST=1;SVLEN=280;SVTYPE=ALU;TSD=GTAAAATGACTTTT\tGT\t0|1\n7\t118083314\tALU_umary_ALU_6320\tT\t<INS:ME:ALU>\t.\t.\tAC=2145;AF=0.428315;AFR_AF=0.4546;AMR_AF=0.3963;AN=5008;CS=ALU_umary;EAS_AF=0.3919;EUR_AF=0.4105;MEINFO=AluUndef,1,280,+;NS=2504;SAS_AF=0.4714;SITEPOST=1;SVLEN=279;SVTYPE=ALU;TSD=AAAAATAATTCCT\tGT\t1|1\n7\t118831254\tUW_VH_13714\tA\t<CN0>\t100\tPASS\tAC=2552;AF=0.509585;AFR_AF=0.5272;AMR_AF=0.4669;AN=5008;CIEND=0,343;CIPOS=-415,0;CS=DEL_union;EAS_AF=0.3274;END=118834745;EUR_AF=0.5;MC=EM_DL_DEL93047,YL_CN_ASW_1867;NS=2504;SAS_AF=0.7137;SVTYPE=DEL\tGT\t1|0\n7\t119558047\tALU_umary_ALU_6326\tT\t<INS:ME:ALU>\t.\t.\tAC=615;AF=0.122804;AFR_AF=0.2065;AMR_AF=0.0735;AN=5008;CS=ALU_umary;EAS_AF=0.0466;EUR_AF=0.1501;MEINFO=AluUndef,1,281,-;NS=2504;SAS_AF=0.0951;SITEPOST=1;SVLEN=280;SVTYPE=ALU;TSD=TTCTATGTATAT\tGT\t0|1\n7\t126045887\tUW_VH_14593\tT\t<CN0>\t100\tPASS\tAC=2847;AF=0.56849;AFR_AF=0.6165;AMR_AF=0.6311;AN=5008;CIEND=0,438;CIPOS=-447,0;CS=DEL_union;EAS_AF=0.5308;END=126051450;EUR_AF=0.493;MC=EM_DL_DEL93226,UW_VH_21980,UW_VH_1487,UW_VH_5457,SI_BD_8175,UW_VH_17690,UW_VH_5336,UW_VH_24774,UW_VH_17573,YL_CN_TSI_1690,BI_GS_DEL1_B1_P1365_32;NS=2504;SAS_AF=0.5757;SVTYPE=DEL\tGT\t1|1\n7\t126775610\tDEL_pindel_23831\tTAAGAATTAATGAGATCGCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAA\tT\t.\tPASS\tAC=2704;AF=0.539936;AFR_AF=0.7035;AMR_AF=0.3991;AN=5008;CS=DEL_pindel;EAS_AF=0.3006;END=126775700;EUR_AF=0.6014;MEINFO=AluYc,230,282,+;NS=2504;SAS_AF=0.6022;SITEPOST=0.99295;SVTYPE=DEL_ALU\tGT\t1|1\n7\t127766414\tDEL_pindel_23849\tTGGGCACAGCATCTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGCGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCTACCACGCCCGGCTAATTTTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGACTACAGGCGTGAGCCACCGCGCCCGGCC\tT\t.\tPASS\tAC=2762;AF=0.551518;AFR_AF=0.7587;AMR_AF=0.5778;AN=5008;CS=DEL_pindel;EAS_AF=0.3313;END=127766728;EUR_AF=0.4901;MEINFO=AluYc2,1,281,-;NS=2504;SAS_AF=0.5429;SITEPOST=0.9965;SVTYPE=DEL_ALU\tGT\t1|0\n7\t127929333\tALU_umary_ALU_6383\tT\t<INS:ME:ALU>\t.\t.\tAC=1806;AF=0.360623;AFR_AF=0.2262;AMR_AF=0.3934;AN=5008;CS=ALU_umary;EAS_AF=0.4127;EUR_AF=0.3897;MEINFO=AluYi6,5,278,-;NS=2504;SAS_AF=0.4356;SITEPOST=1;SVLEN=273;SVTYPE=ALU;TSD=ATGGCCACTATTCTT\tGT\t1|0\n7\t129157179\tALU_umary_ALU_6392\tG\t<INS:ME:ALU>\t.\t.\tAC=2063;AF=0.411941;AFR_AF=0.348;AMR_AF=0.402;AN=5008;CS=ALU_umary;EAS_AF=0.4524;EUR_AF=0.4364;MEINFO=AluUndef,12,281,+;NS=2504;SAS_AF=0.4387;SITEPOST=1;SVLEN=269;SVTYPE=ALU;TSD=AGAAAGTGGGAGAGAAGG\tGT\t1|0\n7\t133785003\tBI_GS_DEL1_B1_P1372_693\tC\t<CN0>\t100\tPASS\tAC=1392;AF=0.277955;AFR_AF=0.1846;AMR_AF=0.4524;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.2173;END=133798330;EUR_AF=0.3817;MC=UW_VH_8239,YL_CN_MSL_1703,EM_DL_DEL93438,UW_VH_10841,UW_VH_3046,UW_VH_11574,SI_BD_8221,UW_VH_18002,UW_VH_1983,UW_VH_5362;NS=2504;SAS_AF=0.2362;SVTYPE=DEL\tGT\t0|1\n7\t134424656\tALU_umary_ALU_6411\tT\t<INS:ME:ALU>\t.\t.\tAC=619;AF=0.123602;AFR_AF=0.1074;AMR_AF=0.085;AN=5008;CS=ALU_umary;EAS_AF=0.1706;EUR_AF=0.1203;MEINFO=AluYa5,3,280,-;NS=2504;SAS_AF=0.1278;SITEPOST=1;SVLEN=277;SVTYPE=ALU;TSD=CATAATTTTATTCTT\tGT\t0|1\n7\t138322188\tDEL_pindel_24056\tGATAGATAGATAGATATATATATATAGATATAGATATAGATATAGATAGATATATATATATATAT\tG\t.\tPASS\tAC=2276;AF=0.454473;AFR_AF=0.3207;AMR_AF=0.5014;AN=5008;CS=DEL_pindel;EAS_AF=0.505;END=138322252;EUR_AF=0.504;NS=2504;SAS_AF=0.499;SITEPOST=0.99;SVTYPE=DEL\tGT\t1|0\n7\t138742268\tDEL_pindel_24070\tAAACAATTACATTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCCCTCTGTTGCCCAGGCTGGAGTGCAGTGGCGCGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCACGCCCGGCTAATTTTTTTGTTATTTTTAGTAGAGATGGGGTTTCACCGTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCACCTCAGCCTCCCACAGTGCTGGGATTACAGACGTGAGCCACCGCGCCCGGCC\tA\t.\tPASS\tAC=2620;AF=0.523163;AFR_AF=0.5764;AMR_AF=0.5043;AN=5008;CS=DEL_pindel;EAS_AF=0.5337;END=138742585;EUR_AF=0.4911;MEINFO=AluY,1,281,-;NS=2504;SAS_AF=0.4867;SITEPOST=0.9932;SVTYPE=DEL_ALU\tGT\t1|1\n7\t140189249\tUW_VH_2076\tA\t<CN0>\t100\tPASS\tAC=1911;AF=0.381589;AFR_AF=0.298;AMR_AF=0.4611;AN=5008;CIEND=0,359;CIPOS=-364,0;CS=DEL_union;EAS_AF=0.3849;END=140190276;EUR_AF=0.4284;MC=SI_BD_8266,BI_GS_DEL1_B1_P1379_128;NS=2504;SAS_AF=0.3865;SVTYPE=DEL\tGT\t1|0\n7\t141113863\tDEL_pindel_24131\tTCCAAAAACATCATTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCCCGCTGTTTAGCCCAGGCCGGATTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCCTCCCAGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTGTTAGCCAAGATGGTCTCGATCTCCTGACCTTGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCAGC\tT\t.\tPASS\tAC=2678;AF=0.534744;AFR_AF=0.5726;AMR_AF=0.5418;AN=5008;CS=DEL_pindel;EAS_AF=0.5506;END=141114182;EUR_AF=0.498;MEINFO=AluYb,2,281,-;NS=2504;SAS_AF=0.5;SITEPOST=0.9948;SVTYPE=DEL_ALU\tGT\t1|0\n7\t143543598\tDUP_gs_CNV_7_143543598_143560593\tA\t<CN0>,<CN2>,<CN3>,<CN4>\t.\tPASS\tAC=6,3958,255,21;AF=0.00119808,0.790335,0.0509185,0.00419329;AFR_AF=0.003,0.6331,0.1165,0.0129;AMR_AF=0,0.7896,0.0216,0;AN=5008;CS=DUP_gs;EAS_AF=0.002,0.8304,0.0595,0.004;END=143560593;EUR_AF=0,0.9175,0.0159,0;NS=2504;SAS_AF=0,0.8313,0.0102,0;SITEPOST=0.9999;SVTYPE=CNV\tGT\t2|2\n7\t144382749\tDEL_pindel_24241\tTTCACATTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCTTTTTTTTTTTTTTTTATTATACTCTAAGTTTTAGGGTACATGTGCACATTGTGCAGGTTAGTTACATATGTATACATGTGCCATGCTGGTGCACTGCACCCACTAATG\tT\t.\tPASS\tAC=4384;AF=0.875399;AFR_AF=0.8797;AMR_AF=0.8674;AN=5008;CS=DEL_pindel;EAS_AF=0.8988;END=144382897;EUR_AF=0.827;NS=2504;SAS_AF=0.9008;SITEPOST=0.9928;SVTYPE=DEL\tGT\t1|1\n7\t144770375\tBI_GS_DEL1_B1_P1383_575\tA\t<CN0>\t100\tPASS\tAC=292;AF=0.0583067;AFR_AF=0.0741;AMR_AF=0.0548;AN=5008;CIEND=-8,9;CIPOS=-8,9;CS=DEL_union;EAS_AF=0.0079;END=144775211;EUR_AF=0.0924;MC=EM_DL_DEL93717,SI_BD_8285,UW_VH_2746,YL_CN_LWK_1762;NS=2504;SAS_AF=0.0562;SVTYPE=DEL\tGT\t0|1\n7\t145063221\tDEL_pindel_24264\tTAAGATACGGGGAGGGGGGAGGGATAGCATTGGGAGATATACCTAATGCTAGATGACACATTAGTGGGTGCAGCGCACCAGCATGGCACATGTATACATATGTAACTAACCTGCACAATGTGCACATGTACCCTAAAACTTAGAGTATAATAAAAAAAAAAAAA\tT\t.\tPASS\tAC=999;AF=0.199481;AFR_AF=0.3011;AMR_AF=0.2305;AN=5008;CS=DEL_pindel;EAS_AF=0.0804;END=145063384;EUR_AF=0.1978;MEINFO=LINE1,5958,5973,+;NS=2504;SAS_AF=0.1646;SITEPOST=1;SVTYPE=DEL_LINE1\tGT\t0|1\n7\t148063001\tDEL_pindel_24321\tCGTGTATGCATGTATACATGCGTGTATGCATGTATACATGCGTGTATGCATGTATACATGTGTGTATGCATGTATACATGT\tC\t.\tPASS\tAC=1412;AF=0.281949;AFR_AF=0.1747;AMR_AF=0.3458;AN=5008;CS=DEL_pindel;EAS_AF=0.2619;END=148063081;EUR_AF=0.3628;NS=2504;SAS_AF=0.319;SITEPOST=0.59895;SVTYPE=DEL\tGT\t1|0\n7\t148072910\tUW_VH_11597\tC\t<CN0>\t100\tPASS\tAC=3299;AF=0.658746;AFR_AF=0.466;AMR_AF=0.8242;AN=5008;CIEND=0,555;CIPOS=-486,0;CS=DEL_union;EAS_AF=0.7113;END=148076327;EUR_AF=0.7932;MC=YL_CN_GIH_1421,EM_DL_DEL93762,UW_VH_689,UW_VH_13646,SI_BD_8312,UW_VH_4916,YL_CN_CDX_1535,UW_VH_20841,YL_CN_BEB_1550,BI_GS_DEL1_B1_P1387_60,UW_VH_21242,UW_VH_7804,YL_CN_CHB_1839,YL_CN_ESN_1895;NS=2504;SAS_AF=0.6094;SVTYPE=DEL\tGT\t1|0\n7\t148818174\tDEL_pindel_24331\tTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC\tT\t.\tPASS\tAC=2844;AF=0.567891;AFR_AF=0.3767;AMR_AF=0.5807;AN=5008;CS=DEL_pindel;EAS_AF=0.6895;END=148818486;EUR_AF=0.5755;MEINFO=AluYa5,1,281,-;NS=2504;SAS_AF=0.684;SITEPOST=0.896;SVTYPE=DEL_ALU\tGT\t0|1\n7\t149847612\tUW_VH_6078\tA\t<CN0>\t100\tPASS\tAC=1403;AF=0.280152;AFR_AF=0.0711;AMR_AF=0.2075;AN=5008;CIEND=0,392;CIPOS=-372,0;CS=DEL_union;EAS_AF=0.4633;END=149849125;EUR_AF=0.2634;MC=SI_BD_8324,BI_GS_DEL1_B2_P1388_584;NS=2504;SAS_AF=0.4427;SVTYPE=DEL\tGT\t1|0\n7\t152245349\tBI_GS_DEL1_B5_P1391_195\tA\t<CN0>\t100\tPASS\tAC=2531;AF=0.505391;AFR_AF=0.2648;AMR_AF=0.5634;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.7669;END=152246306;EUR_AF=0.4284;MC=SI_BD_8346;NS=2504;SAS_AF=0.5992;SVTYPE=DEL\tGT\t1|0\n7\t152419399\tDEL_pindel_24409\tTGGATCACTACTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTTACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC\tT\t.\tPASS\tAC=2212;AF=0.441693;AFR_AF=0.3381;AMR_AF=0.402;AN=5008;CS=DEL_pindel;EAS_AF=0.5069;END=152419715;EUR_AF=0.5258;MEINFO=AluYa5,1,281,-;NS=2504;SAS_AF=0.456;SITEPOST=0.9938;SVTYPE=DEL_ALU\tGT\t1|1\n7\t152574795\tBI_GS_DEL1_B4_P1391_72\tT\t<CN0>\t100\tPASS\tAC=777;AF=0.155152;AFR_AF=0.3843;AMR_AF=0.0634;AN=5008;CIEND=-22,22;CIPOS=-22,22;CS=DEL_union;EAS_AF=0.1329;END=152580352;EUR_AF=0.0507;MC=YL_CN_ASW_1921,YL_CN_TSI_1725,UW_VH_2515,EM_DL_DEL94041;NS=2504;SAS_AF=0.0409;SVTYPE=DEL\tGT\t0|1\n7\t152708457\tUW_VH_1490\tC\t<CN0>\t100\tPASS\tAC=566;AF=0.113019;AFR_AF=0.1195;AMR_AF=0.0807;AN=5008;CIEND=0,545;CIPOS=-390,0;CS=DEL_union;EAS_AF=0.0208;END=152708846;EUR_AF=0.1362;MC=BI_GS_DEL1_B2_P1391_377;NS=2504;SAS_AF=0.1984;SVTYPE=DEL\tGT\t0|1\n7\t153310127\tDEL_pindel_24444\tTAAAACTATAACACTGAGACTTTGCTGAAGTTGCTTATCAGCTTAAGGAGATTTTGGGCTGAGACAATGGGGTTTTCTAGATAAACAATCATGTCGTCTGCAAACAGGGACAATTTGACTTCCTCTTTTCCTAATTGAATACCCTTTATTTCCTTCTCCTGCCTGATTGCCCTGGCCAGAACTTCCAACACTATGTTGAATAGGAGCGGTGAGAGAGGGCATCCCTGTCTTGTGCCAGTTTATTGTGGCATTATTCACAATAGCAAAGACTTGGAACCAACCCAAATGTCCAACAATGATAGACTGGATTAAGAAAATGTGGCACATATACACCATGGAATACTATGCAGCCATAAAAAATGGTGAGTTCATGTCCTTTGTAGGGACATGGATGAAATTGGAAACCATCATTCTCAGTAAACTATCACAAGAACAAAAAACCAAACACCGCATATTCTCACTCATAGGTGGGAATTGAACAAAGAGATCACATGGACACAGGAAGGGGAATATCACACTCTGGGGACTGTGGTGGGGTCGGGGGAGGGGGGAGGGATAGCATTGGGAGATATACCTAATGCTAGATGACGAGTTAGTGGGTGCAGCGCACCAGCACGGCACATGTATACATATGTAACTAACCTGCACAATGTGCACATGTACCCTAAAACTTAAAGTATAATAAAAAAAA\tT\t.\tPASS\tAC=3248;AF=0.648562;AFR_AF=0.2912;AMR_AF=0.7478;AN=5008;CS=DEL_pindel;EAS_AF=0.8085;END=153310817;EUR_AF=0.7376;NS=2504;SAS_AF=0.8047;SITEPOST=0.9445;SVTYPE=DEL\tGT\t1|0\n7\t153529763\tDEL_pindel_24448\tGGAATGATGGTATACCATGAGAATATGTGGCATAAGGTAGTTAGAGGTTTTGATGTCCTATGTTTAGCAGT\tG\t.\tPASS\tAC=845;AF=0.16873;AFR_AF=0.1959;AMR_AF=0.183;AN=5008;CS=DEL_pindel;EAS_AF=0.1399;END=153529833;EUR_AF=0.2028;NS=2504;SAS_AF=0.1166;SITEPOST=1;SVTYPE=DEL\tGT\t0|1\n7\t153966050\tALU_umary_ALU_6501\tT\t<INS:ME:ALU>\t.\t.\tAC=1822;AF=0.363818;AFR_AF=0.2829;AMR_AF=0.4135;AN=5008;CS=ALU_umary;EAS_AF=0.4008;EUR_AF=0.3509;MEINFO=AluYc1,1,272,+;NS=2504;SAS_AF=0.4131;SITEPOST=1;SVLEN=271;SVTYPE=ALU;TSD=AAAAATGCCCATCT\tGT\t1|0\n7\t154858220\tALU_umary_ALU_6505\tT\t<INS:ME:ALU>\t.\t.\tAC=1488;AF=0.297125;AFR_AF=0.1377;AMR_AF=0.3919;AN=5008;CS=ALU_umary;EAS_AF=0.1915;EUR_AF=0.4672;MEINFO=AluUndef,1,281,-;NS=2504;SAS_AF=0.3793;SITEPOST=1;SVLEN=280;SVTYPE=ALU;TSD=GTAACATAAGCTTT\tGT\t0|1\n7\t154941915\tDEL_pindel_24483\tTAAGAAAAGTGGGTGCAAGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGCGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGCTTGCAGTGAACCGAGATTGCGCCACTGCAGTCCGCAGTCTGGCCTGGGCGACAGAGCGAGACCCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAA\tT\t.\tPASS\tAC=2840;AF=0.567093;AFR_AF=0.4652;AMR_AF=0.5749;AN=5008;CS=DEL_pindel;EAS_AF=0.6141;END=154942244;EUR_AF=0.6074;MEINFO=AluYb8,1,281,+;NS=2504;SAS_AF=0.6094;SITEPOST=0.9933;SVTYPE=DEL_ALU\tGT\t0|1\n7\t155139370\tUW_VH_4657\tT\t<CN0>\t100\tPASS\tAC=2740;AF=0.547125;AFR_AF=0.5598;AMR_AF=0.7219;AN=5008;CIEND=0,202;CIPOS=-143,0;CS=DEL_union;EAS_AF=0.3433;END=155140881;EUR_AF=0.6889;MC=EM_DL_DEL101045033,SI_BD_8383;NS=2504;SAS_AF=0.4703;SVTYPE=DEL\tGT\t0|1\n7\t155140316\tUW_VH_9614\tA\t<CN0>\t100\tPASS\tAC=2739;AF=0.546925;AFR_AF=0.559;AMR_AF=0.7219;AN=5008;CIEND=0,182;CIPOS=-199,0;CS=DEL_union;EAS_AF=0.3433;END=155141440;EUR_AF=0.6889;NS=2504;SAS_AF=0.4703;SVTYPE=DEL\tGT\t0|1\n7\t155652238\tDEL_pindel_24513\tTATCTCTGTATCTCTGTCTGCATCTGTATCTGTATCTGCATCTGTATTTGCATCTATCTCTGTATCTGCATCTGCATCTATATCTGTATCC\tT\t.\tPASS\tAC=575;AF=0.114816;AFR_AF=0.1989;AMR_AF=0.1081;AN=5008;CS=DEL_pindel;EAS_AF=0.0268;END=155652328;EUR_AF=0.0974;NS=2504;SAS_AF=0.1145;SITEPOST=0.9968;SVTYPE=DEL\tGT\t0|1\n7\t157734829\tDEL_pindel_24599\tGCACAGGGGTCCTCGGCCCACCCTCCACACACAGGGGTCCTCGGCCCACCCTCCACA\tG\t.\tPASS\tAC=1993;AF=0.397963;AFR_AF=0.4758;AMR_AF=0.3919;AN=5008;CS=DEL_pindel;EAS_AF=0.4395;END=157734885;EUR_AF=0.329;NS=2504;SAS_AF=0.3252;SITEPOST=0.99275;SVTYPE=DEL\tGT\t1|0\n7\t157825833\tDEL_pindel_24607\tAGTGGCCACCAAGCCTGACAGAGCCATTGGGGGCCACGAATAAAGCCTTGGTGCCTGGTG\tA\t.\tPASS\tAC=1296;AF=0.258786;AFR_AF=0.3253;AMR_AF=0.3112;AN=5008;CS=DEL_pindel;EAS_AF=0.2212;END=157825892;EUR_AF=0.2058;NS=2504;SAS_AF=0.2249;SITEPOST=0.9993;SVTYPE=DEL\tGT\t1|0\n7\t158029473\tBI_GS_DEL1_B1_P1397_25\tA\t<CN0>\t100\tPASS\tAC=4046;AF=0.807907;AFR_AF=0.8759;AMR_AF=0.7939;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.7679;END=158030453;EUR_AF=0.7545;MC=DEL_pindel_24625;NS=2504;SAS_AF=0.8221;SVTYPE=DEL\tGT\t0|1\n7\t158046568\tSI_BD_8455\tC\t<CN0>\t100\tPASS\tAC=3221;AF=0.643171;AFR_AF=0.7216;AMR_AF=0.5663;AN=5008;CIEND=-50,194;CIPOS=-194,57;CS=DEL_union;EAS_AF=0.6319;END=158047317;EUR_AF=0.6421;MC=BI_GS_DEL1_B1_P1397_41;NS=2504;SAS_AF=0.6043;SVTYPE=DEL\tGT\t1|1\n7\t158500754\tYL_CN_GBR_1789\tA\t<CN0>\t100\tPASS\tAC=751;AF=0.14996;AFR_AF=0.2867;AMR_AF=0.0692;AN=5008;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0.1488;END=158504852;EUR_AF=0.1014;MC=BI_GS_DEL1_B1_P1397_411,UW_VH_21158,UW_VH_10062,UW_VH_4139,SI_BD_8471,UW_VH_4477,UW_VH_17315;NS=2504;SAS_AF=0.0736;SVTYPE=DEL\tGT\t0|1\n8\t594395\tUW_VH_25421\tA\t<CN0>\t100\tPASS\tAC=3261;AF=0.651158;AFR_AF=0.4856;AMR_AF=0.6167;AN=5008;CIEND=0,373;CIPOS=-346,0;CS=DEL_union;EAS_AF=0.5883;END=599417;EUR_AF=0.8241;MC=UW_VH_11724,UW_VH_694,UW_VH_9015,UW_VH_10875,UW_VH_20418,YL_CN_ASW_1939,UW_VH_6851,BI_GS_DEL1_B1_P1399_346,EM_DL_DEL94462,UW_VH_13253,UW_VH_3236,UW_VH_14473,UW_VH_4435,UW_VH_10961,UW_VH_11379,UW_VH_18019,UW_VH_11035,YL_CN_FIN_1768,UW_VH_8420;NS=2504;SAS_AF=0.7863;SVTYPE=DEL\tGT\t1|1\n8\t597104\tBI_GS_DEL1_B2_P1399_303\tG\t<CN0>\t100\tPASS\tAC=3309;AF=0.660743;AFR_AF=0.5219;AMR_AF=0.6167;AN=5008;CIEND=-1,1;CIPOS=-1,1;CS=DEL_union;EAS_AF=0.5883;END=598344;EUR_AF=0.8241;MC=UW_VH_14828,SI_BD_8508,YL_CN_GWD_2570;NS=2504;SAS_AF=0.7863;SVTYPE=DEL\tGT\t1|1\n8\t1071684\tDEL_pindel_24660\tCTCATCTTTCCTGAACCCATGACCACCCATCCTTGTCCCTTTAGAACCCACAACCACCCGTCT\tC\t.\tPASS\tAC=591;AF=0.118011;AFR_AF=0.0514;AMR_AF=0.1484;AN=5008;CS=DEL_pindel;EAS_AF=0.0655;END=1071746;EUR_AF=0.2207;NS=2504;SAS_AF=0.135;SITEPOST=0.9979;SVTYPE=DEL\tGT\t0|1\n8\t1836099\tYL_CN_ESN_1943\tC\t<CN0>\t100\tPASS\tAC=2229;AF=0.445088;AFR_AF=0.4584;AMR_AF=0.3127;AN=5008;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0.4683;END=1838287;EUR_AF=0.3469;MC=UW_VH_3666,BI_GS_DEL1_B5_P1400_846,UW_VH_16467,YL_CN_GWD_2587,UW_VH_12980,UW_VH_16351;NS=2504;SAS_AF=0.5982;SVTYPE=DEL\tGT\t1|0\n8\t2122088\tBI_GS_DEL1_B5_P1401_148\tA\t<CN0>\t100\tPASS\tAC=3456;AF=0.690096;AFR_AF=0.6165;AMR_AF=0.5101;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.8284;END=2122354;EUR_AF=0.6372;MC=UW_VH_1805,DEL_pindel_24692;NS=2504;SAS_AF=0.8292;SVTYPE=DEL\tGT\t1|0\n8\t2132773\tDUP_uwash_chr8_2132773_2270819\tA\t<CN2>,<CN3>\t.\tPASS\tAC=4996,12;AF=0.997604,0.00239617;AFR_AF=1,0;AMR_AF=1,0;AN=5008;CS=DUP_uwash;EAS_AF=0.9921,0.0079;END=2270819;EUR_AF=1,0;NS=2504;SAS_AF=0.9959,0.0041;SITEPOST=1;SVTYPE=CNV\tGT\t1|1\n8\t2250563\tUW_VH_12858\tT\t<CN0>\t100\tPASS\tAC=673;AF=0.134385;AFR_AF=0.3578;AMR_AF=0.0778;AN=5008;CIEND=0,75;CIPOS=-46,0;CS=DEL_union;EAS_AF=0.001;END=2266528;EUR_AF=0.0726;NS=2504;SAS_AF=0.0736;SVTYPE=DEL\tGT\t1|0\n8\t2778563\tDEL_pindel_24710\tGGTTGCAGTGAGCCAAGATCACACCACTGTACTCCAGCCTGGCCGACAGAGGAAGACTCTGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACCGACAAAATTGGAACAAAAATTTTTAGTGGTGGCTCACGCCTGTAATCCCAACACTTTGGGAGGCTGAGGTGGGAGGATCCCTTGAGACCAGGAGTTTGAAACCAGCCTGGGCAAAAAAATGAGACCAT\tG\t.\tPASS\tAC=1524;AF=0.304313;AFR_AF=0.2595;AMR_AF=0.3156;AN=5008;CS=DEL_pindel;EAS_AF=0.249;END=2778787;EUR_AF=0.2972;NS=2504;SAS_AF=0.4213;SITEPOST=0.9992;SVTYPE=DEL\tGT\t1|1\n8\t3994862\tBI_GS_DEL1_B2_P1402_674\tA\t<CN0>\t100\tPASS\tAC=1156;AF=0.230831;AFR_AF=0.0325;AMR_AF=0.3314;AN=5008;CIEND=-4,5;CIPOS=-4,5;CS=DEL_union;EAS_AF=0.1319;END=3995320;EUR_AF=0.4095;NS=2504;SAS_AF=0.3456;SVTYPE=DEL\tGT\t1|0\n8\t4122887\tUW_VH_14451\tC\t<CN0>\t100\tPASS\tAC=2141;AF=0.427516;AFR_AF=0.1399;AMR_AF=0.4669;AN=5008;CIEND=0,404;CIPOS=-419,0;CS=DEL_union;EAS_AF=0.4236;END=4124965;EUR_AF=0.6223;MC=UW_VH_14520,UW_VH_696,YL_CN_PEL_1677,YL_CN_LWK_1826,UW_VH_4660,UW_VH_18163,YL_CN_CHS_1891,UW_VH_6145,UW_VH_3650,YL_CN_FIN_1792,YL_CN_ACB_2162,BI_GS_DEL1_B1_P1403_111,YL_CN_JPT_2049,UW_VH_18756,YL_CN_MXL_1592,UW_VH_6523,SI_BD_8595,YL_CN_YRI_2405,YL_CN_CDX_1582;NS=2504;SAS_AF=0.592;SVTYPE=DEL\tGT\t1|1\n8\t4222049\tDEL_pindel_24785\tTAAAAAGATAATCAATGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGCGCGACAGAGCGAGACTCCTTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA\tT\t.\tPASS\tAC=2979;AF=0.594848;AFR_AF=0.7103;AMR_AF=0.5231;AN=5008;CS=DEL_pindel;EAS_AF=0.6151;END=4222389;EUR_AF=0.5487;MEINFO=AluYa5,1,281,+;NS=2504;SAS_AF=0.5164;SITEPOST=0.9862;SVTYPE=DEL_ALU\tGT\t0|1\n8\t4941223\tDEL_pindel_24814\tTAAGATGGAAGTACACTTTGGGAGGCCGAGGCGGGTGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCGCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA\tT\t.\tPASS\tAC=2326;AF=0.464457;AFR_AF=0.5008;AMR_AF=0.4769;AN=5008;CS=DEL_pindel;EAS_AF=0.5367;END=4941520;EUR_AF=0.4056;MEINFO=AluY,35,281,+;NS=2504;SAS_AF=0.3926;SITEPOST=0.999;SVTYPE=DEL_ALU\tGT\t1|0\n8\t5748176\tDEL_pindel_24832\tTAAAAATGGAGAGGCCGGGCGCGGTGGCTCACGCCTGTAGTCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGCAGTGGCGGGCGCCTGTAGTCCCAGCTACTGGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCCGGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA\tT\t.\tPASS\tAC=1690;AF=0.33746;AFR_AF=0.2352;AMR_AF=0.3732;AN=5008;CS=DEL_pindel;EAS_AF=0.4732;END=5748505;EUR_AF=0.3738;MEINFO=AluYb3a1,1,281,+;NS=2504;SAS_AF=0.273;SITEPOST=0.9987;SVTYPE=DEL_ALU\tGT\t0|1\n8\t5829282\tL1_umary_LINE1_1626\tT\t<INS:ME:LINE1>\t.\t.\tAC=2524;AF=0.503994;AFR_AF=0.2738;AMR_AF=0.6037;AN=5008;CS=L1_umary;EAS_AF=0.7143;EUR_AF=0.5944;MEINFO=LINE1,5441,6011,-;NS=2504;SAS_AF=0.4346;SITEPOST=1;SVLEN=570;SVTYPE=LINE1;TSD=GTTTTCT\tGT\t0|1\n8\t6587829\tDEL_pindel_24861\tAATCATAGGACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGGAGACGGAGTCTCGCTGTCGCCCAGGCTGGAGTGCAGTGGCGCAATCTCGGTTCACTGCAGGCTCCGCCCCCTGGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCTCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC\tA\t.\tPASS\tAC=3254;AF=0.64976;AFR_AF=0.8003;AMR_AF=0.6427;AN=5008;CS=DEL_pindel;EAS_AF=0.6319;END=6588150;EUR_AF=0.5934;MEINFO=AluYe,1,281,-;NS=2504;SAS_AF=0.5276;SITEPOST=0.9908;SVTYPE=DEL_ALU\tGT\t1|0\n8\t6991759\tDUP_gs_CNV_8_6991759_6995386\tC\t<CN0>,<CN2>\t.\tPASS\tAC=1308,13;AF=0.261182,0.00259585;AFR_AF=0.1301,0.0038;AMR_AF=0.2695,0.0043;AN=5008;CS=DUP_gs;EAS_AF=0.3978,0.001;END=6995386;EUR_AF=0.2515,0.002;MC=YL_CN_CLM_1618,UW_VH_1807,BI_GS_DEL1_B1_P1405_887,SI_BD_8631,YL_CN_GIH_1489;NS=2504;SAS_AF=0.3016,0.002;SITEPOST=1;SVTYPE=CNV\tGT\t0|1\n8\t7212582\tDUP_gs_CNV_8_7212582_7227421\tG\t<CN0>,<CN2>,<CN3>,<CN4>\t.\tPASS\tAC=293,1489,35,28;AF=0.0585064,0.297324,0.00698882,0.00559105;AFR_AF=0.1815,0.1218,0.003,0.0023;AMR_AF=0.0101,0.4207,0.0216,0.0173;AN=5008;CS=DUP_gs;EAS_AF=0.0139,0.2609,0.003,0.0069;END=7227421;EUR_AF=0.008,0.4414,0.006,0.003;NS=2504;SAS_AF=0.0245,0.3364,0.0072,0.0031;SITEPOST=0.9999;SVTYPE=CNV\tGT\t2|2\n8\t7355293\tBI_GS_DEL1_B1_P1406_29\tT\t<CN0>\t100\tPASS\tAC=4491;AF=0.896765;AFR_AF=0.7723;AMR_AF=0.9323;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.9722;END=7364762;EUR_AF=0.9414;MC=YL_CN_PUR_2321;NS=2504;SAS_AF=0.9162;SVTYPE=DEL\tGT\t1|1\n8\t7774146\tDUP_gs_CNV_8_7774146_7782327\tA\t<CN0>,<CN2>,<CN3>,<CN4>\t.\tPASS\tAC=1821,687,389,40;AF=0.363618,0.137181,0.0776757,0.00798722;AFR_AF=0.1089,0.2292,0.2163,0.0136;AMR_AF=0.5245,0.0634,0.0288,0.0058;AN=5008;CS=DUP_gs;EAS_AF=0.369,0.1131,0.0397,0.0069;END=7782327;EUR_AF=0.492,0.1064,0.0239,0.007;NS=2504;SAS_AF=0.456,0.1217,0.0194,0.0041;SITEPOST=0.99415;SVTYPE=CNV\tGT\t1|1\n8\t8072609\tDUP_gs_CNV_8_8072609_8077628\tC\t<CN0>,<CN2>,<CN3>,<CN4>\t.\tPASS\tAC=2200,400,85,26;AF=0.439297,0.0798722,0.0169728,0.00519169;AFR_AF=0.1218,0.2511,0.0582,0.0189;AMR_AF=0.5274,0.0202,0.0014,0;AN=5008;CS=DUP_gs;EAS_AF=0.7321,0.0179,0.001,0.001;END=8077628;EUR_AF=0.4354,0.0119,0.005,0;NS=2504;SAS_AF=0.5082,0.0245,0.001,0;SITEPOST=1;SVTYPE=CNV\tGT\t1|0\n8\t8245067\tDEL_pindel_24896\tTGAGAGGAGGAAGATGGGCCCCCACCCCCACCCCCAGATCCCTGGCTCTCCTCTTTGCTGCTGTGGGTGTGGACAGA\tT\t.\tPASS\tAC=2087;AF=0.416733;AFR_AF=0.3192;AMR_AF=0.415;AN=5008;CS=DEL_pindel;EAS_AF=0.5913;END=8245143;EUR_AF=0.2823;NS=2504;SAS_AF=0.5082;SITEPOST=0.9998;SVTYPE=DEL\tGT\t1|0\n8\t8920127\tALU_umary_ALU_6560\tG\t<INS:ME:ALU>\t.\t.\tAC=1692;AF=0.337859;AFR_AF=0.0772;AMR_AF=0.4236;AN=5008;CS=ALU_umary;EAS_AF=0.5119;EUR_AF=0.3678;MEINFO=AluUndef,3,281,+;NS=2504;SAS_AF=0.4192;SITEPOST=1;SVLEN=278;SVTYPE=ALU;TSD=AAGAAGGGGACGG\tGT\t0|1\n8\t9665673\tALU_umary_ALU_6564\tC\t<INS:ME:ALU>\t.\t.\tAC=1962;AF=0.391773;AFR_AF=0.3116;AMR_AF=0.3559;AN=5008;CS=ALU_umary;EAS_AF=0.3661;EUR_AF=0.4781;MEINFO=AluYb7_2,1,279,+;NS=2504;SAS_AF=0.4632;SITEPOST=1;SVLEN=278;SVTYPE=ALU;TSD=AGAAGATCTTCACTGGC\tGT\t0|1\n8\t9807901\tALU_umary_ALU_6565\tG\t<INS:ME:ALU>\t.\t.\tAC=3024;AF=0.603834;AFR_AF=0.5174;AMR_AF=0.5951;AN=5008;CS=ALU_umary;EAS_AF=0.623;EUR_AF=0.6272;MEINFO=AluYb8,1,281,+;NS=2504;SAS_AF=0.683;SITEPOST=1;SVLEN=280;SVTYPE=ALU;TSD=AAAAGAGTCTG\tGT\t1|1\n8\t11245530\tUW_VH_15223\tT\t<CN0>\t100\tPASS\tAC=1869;AF=0.373203;AFR_AF=0.7466;AMR_AF=0.2867;AN=5008;CIEND=0,544;CIPOS=-448,0;CS=DEL_union;EAS_AF=0.0208;END=11247217;EUR_AF=0.3887;MC=YL_CN_PJL_2034,SI_BD_8663,YL_CN_ITU_1949,UW_VH_3736,YL_CN_LWK_1877,YL_CN_ASW_2004,YL_CN_MSL_1831,BI_GS_DEL1_B4_P1410_61,UW_VH_1986,YL_CN_ESN_2020,UW_VH_4286,EM_DL_DEL101055145,YL_CN_PUR_2356,UW_VH_4694,UW_VH_18685;NS=2504;SAS_AF=0.2771;SVTYPE=DEL\tGT\t1|0\n8\t12389850\tDUP_gs_CNV_8_12389850_12428478\tT\t<CN2>,<CN3>,<CN4>,<CN5>,<CN6>,<CN7>\t.\tPASS\tAC=291,2392,1726,61,45,12;AF=0.058107,0.477636,0.344649,0.0121805,0.00898562,0.00239617;AFR_AF=0.0129,0.4107,0.385,0.0272,0.0242,0.0045;AMR_AF=0.0533,0.5303,0.3098,0.0072,0.0043,0.0029;AN=5008;CS=DUP_gs;EAS_AF=0.1498,0.4206,0.3353,0.0069,0.005,0.004;END=12428478;EUR_AF=0.0258,0.5676,0.3231,0.0089,0.003,0;NS=2504;SAS_AF=0.0613,0.4969,0.3466,0.0041,0.002,0;SITEPOST=0.98045;SVTYPE=CNV\tGT\t2|2\n8\t13594464\tDEL_pindel_25036\tTGACTTCATTCTTTTTCTTTTTTTTTTTTTTTTTTATTTTTTTTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC\tT\t.\tPASS\tAC=3400;AF=0.678914;AFR_AF=0.6415;AMR_AF=0.683;AN=5008;CS=DEL_pindel;EAS_AF=0.6974;END=13594628;EUR_AF=0.7048;MEINFO=AluYb,1,132,-;NS=2504;SAS_AF=0.681;SITEPOST=0.9684;SVTYPE=DEL_ALU\tGT\t1|0\n8\t13778059\tDEL_pindel_25043\tTAAAGAAATTGGACCGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGCGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCCGACCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAA\tT\t.\tPASS\tAC=4130;AF=0.824681;AFR_AF=0.7958;AMR_AF=0.817;AN=5008;CS=DEL_pindel;EAS_AF=0.8591;END=13778385;EUR_AF=0.841;MEINFO=AluYb6_2,1,281,+;NS=2504;SAS_AF=0.817;SITEPOST=0.9757;SVTYPE=DEL_ALU\tGT\t1|1\n8\t15001266\tDEL_pindel_25062\tTCTATTATTACCTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC\tT\t.\tPASS\tAC=4059;AF=0.810503;AFR_AF=0.73;AMR_AF=0.8444;AN=5008;CS=DEL_pindel;EAS_AF=0.8373;END=15001586;EUR_AF=0.8459;MEINFO=AluYa4_5,1,281,-;NS=2504;SAS_AF=0.8313;SITEPOST=0.97405;SVTYPE=DEL_ALU\tGT\t1|1\n8\t15053390\tDEL_pindel_25063\tTAGGCTTCGATTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGCGATCTTGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCTACCACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC\tT\t.\tPASS\tAC=207;AF=0.0413339;AFR_AF=0.0613;AMR_AF=0.0519;AN=5008;CS=DEL_pindel;EAS_AF=0.003;END=15053705;EUR_AF=0.0437;MEINFO=AluYc2,1,281,-;NS=2504;SAS_AF=0.044;SITEPOST=1;SVTYPE=DEL_ALU\tGT\t1|0\n8\t15387290\tDEL_pindel_25068\tTGAAAAAGTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTTGCCCAGGCCGGACTGCGGACTGCAATGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCTGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC\tT\t.\tPASS\tAC=335;AF=0.066893;AFR_AF=0.1256;AMR_AF=0.036;AN=5008;CS=DEL_pindel;EAS_AF=0.0952;END=15387593;EUR_AF=0.0318;MEINFO=AluYb3a1,1,281,-;NS=2504;SAS_AF=0.0164;SITEPOST=0.9999;SVTYPE=DEL_ALU\tGT\t1|0\n8\t15401664\tBI_GS_CNV_8_15401664_15414791\tG\t<CN0>\t100\tPASS\tAC=134;AF=0.0267572;AFR_AF=0.0008;AMR_AF=0.0231;AN=5008;CIEND=0,500;CIPOS=-500,0;CS=DEL_union;EAS_AF=0.0694;END=15414791;EUR_AF=0.0249;MC=UW_VH_10393,EM_DL_DEL95146;NS=2504;SAS_AF=0.0225;SVTYPE=DEL\tGT\t1|0\n8\t16102822\tALU_umary_ALU_6598\tT\t<INS:ME:ALU>\t.\t.\tAC=2394;AF=0.478035;AFR_AF=0.2564;AMR_AF=0.5432;AN=5008;CS=ALU_umary;EAS_AF=0.5288;EUR_AF=0.6044;MEINFO=AluYa5,28,281,-;NS=2504;SAS_AF=0.5491;SITEPOST=1;SVLEN=253;SVTYPE=ALU;TSD=CATATTATGGATTCTT\tGT\t0|1\n8\t16821865\tBI_GS_DEL1_B3_P1415_28\tG\t<CN0>\t100\tPASS\tAC=1682;AF=0.335863;AFR_AF=0.2239;AMR_AF=0.3948;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.4435;END=16822240;EUR_AF=0.2903;MC=DEL_pindel_25098;NS=2504;SAS_AF=0.3814;SVTYPE=DEL\tGT\t0|1\n8\t16984984\tDEL_pindel_25104\tTTAAAGCACAGCCAAATGTCAGCCTTCATTTGTCAACTTAAATATGTTTTTTCTAAAATTTA\tT\t.\tPASS\tAC=2617;AF=0.522564;AFR_AF=0.6392;AMR_AF=0.4582;AN=5008;CS=DEL_pindel;EAS_AF=0.4435;END=16985045;EUR_AF=0.4751;NS=2504;SAS_AF=0.5409;SITEPOST=0.9999;SVTYPE=DEL\tGT\t1|1\n8\t23447840\tDEL_pindel_25272\tATATATATATATATATATATATATATATATATATATATATATATATATATG\tA\t.\tPASS\tAC=3432;AF=0.685304;AFR_AF=0.6755;AMR_AF=0.7291;AN=5008;CS=DEL_pindel;EAS_AF=0.7212;END=23447890;EUR_AF=0.672;NS=2504;SAS_AF=0.6442;SITEPOST=0.91965;SVTYPE=DEL\tGT\t1|1\n8\t24972437\tUW_VH_2559\tC\t<CN0>\t100\tPASS\tAC=1089;AF=0.217452;AFR_AF=0.121;AMR_AF=0.2147;AN=5008;CIEND=0,503;CIPOS=-465,0;CS=DEL_union;EAS_AF=0.2222;END=24990950;EUR_AF=0.3499;MC=EM_DL_DEL95398,UW_VH_5276,BI_GS_DEL1_B1_P1423_852,YL_CN_GBR_1902,UW_VH_12784,UW_VH_8118,SI_BD_8763;NS=2504;SAS_AF=0.2086;SVTYPE=DEL\tGT\t0|1\n8\t25066682\tBI_GS_DEL1_B1_P1424_53\tT\t<CN0>\t100\tPASS\tAC=3041;AF=0.607228;AFR_AF=0.4032;AMR_AF=0.719;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.5903;END=25070659;EUR_AF=0.836;MC=UW_VH_7161,UW_VH_7833,UW_VH_25179,UW_VH_11504,UW_VH_21243,UW_VH_2663,EM_DL_DEL95403,UW_VH_13844,UW_VH_4824,UW_VH_11380,UW_VH_3146,UW_VH_18676,SI_BD_8766,UW_VH_19120,UW_VH_14669,YL_CN_BEB_1687,UW_VH_20814,UW_VH_13556;NS=2504;SAS_AF=0.5859;SVTYPE=DEL\tGT\t1|1\n8\t25172660\tALU_umary_ALU_6639\tT\t<INS:ME:ALU>\t.\t.\tAC=2417;AF=0.482628;AFR_AF=0.3555;AMR_AF=0.5677;AN=5008;CS=ALU_umary;EAS_AF=0.5288;EUR_AF=0.5736;MEINFO=AluYa5,1,280,-;NS=2504;SAS_AF=0.453;SITEPOST=1;SVLEN=279;SVTYPE=ALU;TSD=ATATTAAAATTCTT\tGT\t1|1\n8\t25327221\tDEL_pindel_25307\tGATACACTTTATGAGATAAAGTGTACACTTTTCTCAGGATAAAGTATCTCCTGTACAC\tG\t.\tPASS\tAC=4795;AF=0.957468;AFR_AF=0.8495;AMR_AF=0.9957;AN=5008;CS=DEL_pindel;EAS_AF=1;END=25327278;EUR_AF=0.999;NS=2504;SAS_AF=0.9898;SITEPOST=1;SVTYPE=DEL\tGT\t1|1\n8\t26073403\tALU_umary_ALU_6642\tT\t<INS:ME:ALU>\t.\t.\tAC=1625;AF=0.324481;AFR_AF=0.2474;AMR_AF=0.3357;AN=5008;CS=ALU_umary;EAS_AF=0.3839;EUR_AF=0.3062;MEINFO=AluUndef,1,281,-;NS=2504;SAS_AF=0.3783;SITEPOST=1;SVLEN=280;SVTYPE=ALU;TSD=CAAATCCCCATCATCTT\tGT\t0|1\n8\t30392277\tDEL_pindel_25400\tTAAAACTGATAACTACTTTGGGAGGCCGAGGCGGGTGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAAAAAATACAAAAAATTAGCCGGGCGCGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCCGGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA\tT\t.\tPASS\tAC=4073;AF=0.813299;AFR_AF=0.8116;AMR_AF=0.8141;AN=5008;CS=DEL_pindel;EAS_AF=0.8115;END=30392581;EUR_AF=0.8032;MEINFO=AluYb6_2,36,281,+;NS=2504;SAS_AF=0.8272;SITEPOST=0.9751;SVTYPE=DEL_ALU\tGT\t0|1\n8\t31571241\tDEL_pindel_25416\tATTCTCTGTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGTCGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGATGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCCT\tA\t.\tPASS\tAC=3588;AF=0.716454;AFR_AF=0.6861;AMR_AF=0.7378;AN=5008;CS=DEL_pindel;EAS_AF=0.6994;END=31571594;EUR_AF=0.7326;MEINFO=AluYb6_2,1,281,-;NS=2504;SAS_AF=0.7434;SITEPOST=0.9494;SVTYPE=DEL_ALU\tGT\t0|1\n8\t32679960\tSI_BD_8809\tC\t<CN0>\t100\tPASS\tAC=4699;AF=0.938299;AFR_AF=0.77;AMR_AF=0.9928;AN=5008;CIEND=-50,322;CIPOS=-322,95;CS=DEL_union;EAS_AF=1;END=32691259;EUR_AF=1;MC=UW_VH_21244,YL_CN_ACB_2283,UW_VH_1341,UW_VH_14715;NS=2504;SAS_AF=1;SVTYPE=DEL\tGT\t1|1\n8\t34022524\tDEL_pindel_25477\tCTATTCTTTGTGTATGATACTGATGTGGACACTGAAATATAAATAGTGCATAAACACCTTTCTCTCCCCTTTAATTCATGGTTAGTAACATACTTTGAATTCCATAAGTCTTGTCATTAGTTAAATTATAGTGTATTCATGTATTTAAAGTCAAAGACTTTTAAGTCCACAATTTTTCATTTATACATCCCATTTACAAAATGTGAATCCTAAACTTCATGATATTTTAGGACATGGCCACGTTTAAAGTTCTATGACAATAAATATGTGGCTGGGAGTCAA\tC\t.\tPASS\tAC=538;AF=0.107428;AFR_AF=0.2103;AMR_AF=0.1412;AN=5008;CS=DEL_pindel;EAS_AF=0.0228;END=34022805;EUR_AF=0.0944;NS=2504;SAS_AF=0.045;SITEPOST=0.9992;SVTYPE=DEL\tGT\t0|1\n8\t34166427\tDEL_pindel_25485\tTATGTTCACAGTGGCATTATTCACAATAGCCAGGATATGGGAACAACTTAAATACCCATCAGTGAATAA\tT\t.\tPASS\tAC=1116;AF=0.222843;AFR_AF=0.2602;AMR_AF=0.1427;AN=5008;CS=DEL_pindel;EAS_AF=0.2391;END=34166495;EUR_AF=0.1421;NS=2504;SAS_AF=0.2955;SITEPOST=1;SVTYPE=DEL\tGT\t0|1\n8\t34947383\tDEL_pindel_25508\tAATATATATATACACGTATATATATATACACGTATATATATATATACACGTATATATATACATACACGTATATAT\tA\t.\tPASS\tAC=2148;AF=0.428914;AFR_AF=0.4614;AMR_AF=0.4308;AN=5008;CS=DEL_pindel;EAS_AF=0.4296;END=34947457;EUR_AF=0.4294;NS=2504;SAS_AF=0.3824;SITEPOST=0.99095;SVTYPE=DEL\tGT\t0|1\n8\t37050879\tDEL_pindel_25540\tTGATTTTTGTAGGGGTGGGTTGCCCCTACACACCTGTGGGTGTTTCTCGTAAGGTGGGACGAGAGATTTGGAAAAGAAAAAGACACAGAGACAAAGTATAGAGAAAGAAATAAGGGGACCCGGGGAACCAGCGTTCAGCATATGGAGGATCCCGCCAGCCTCTGAGTTCCCTTAGTATTTATTGATCATCTGTGGGTGTTTCTCAAAGAGGGGGATGTGTCAGGGTCACAAGACAATTGTGGGGAGAGGGTCAGCAGACAAACACGTGAACAAAGGTCTTGGCATCATAGACAATGTAAAGGATTAAGTGCTGTGCTTTTAGATATGCATACACATAAACATCTCAGTGCTTTACAAAGCAGTATTGCTGCCCGCAGGTCCCACCTCCAGCCCTAAGGCGGTTTTTCCCTATCTCAGTAGATGGAGCATACAATCGGGTTTTATACCGAGACATTCCATTGCCCAGGGACAGGCAGGAGACAGATGCCTTCCTCTTGTCTCAACTGCAAGAGGCATTCCTTCCTCTTTTACTAATCCTCCTCAGCACAGACCCTTTACGGGTGTCGGGCTGGGGGACGGTCAGGTCTTTCCCTTCCCACGAGGCCATATTTCAGACTATCACATGGGGAGAAACCTTGGACAATACCTGGCTTTCCTAGGCAGAGGTCCCTGCGGCCTTCCGCAGTTTTTGTGTCCCTGGGTACTTGAGATTAGGGAGTGGTGATGACTCTTAAGGAGCATGCTGCCTTCAAGCATCTGTTTAACAAAGCACATCCTGCACCGCCCTTAATCCATTCAACTCTGAGTTGACACAGCACACGTTTCAGAGAGCACGGGGTTGGGGGTAAGGTCATAGATTAACAGAATCTCAAGGCAGAAGAATTTTTCTTAGTACATAACAAAATGGAGTCTCCTATGTCTACTTCTTTCTACACAGACACAGTAACAATCTGATCTCTCTTGCTTTTCCCCACA\tT\t.\tPASS\tAC=3665;AF=0.731829;AFR_AF=0.6611;AMR_AF=0.7968;AN=5008;CS=DEL_pindel;EAS_AF=0.7351;END=37051853;EUR_AF=0.8111;NS=2504;SAS_AF=0.6963;SITEPOST=0.99825;SVTYPE=DEL\tGT\t1|1\n8\t38864077\tALU_umary_ALU_6685\tC\t<INS:ME:ALU>\t.\t.\tAC=1813;AF=0.362021;AFR_AF=0.2375;AMR_AF=0.4078;AN=5008;CS=ALU_umary;EAS_AF=0.5407;EUR_AF=0.3787;MEINFO=AluYa1_1,1,280,+;NS=2504;SAS_AF=0.2965;SITEPOST=1;SVLEN=279;SVTYPE=ALU;TSD=AAAAAGGTATCATAGTC\tGT\t1|0\n8\t39195825\tDUP_uwash_chr8_39195825_39389230\tT\t<CN0>\t.\tPASS\tAC=1332;AF=0.265974;AFR_AF=0.0923;AMR_AF=0.4121;AN=5008;CS=DUP_uwash;EAS_AF=0.1488;END=39389230;EUR_AF=0.4284;NS=2504;SAS_AF=0.3507;SITEPOST=1;SVTYPE=DEL\tGT\t1|0\n8\t39232005\tBI_GS_CNV_8_39232005_39287823\tA\t<CN0>\t100\tPASS\tAC=1333;AF=0.266174;AFR_AF=0.0923;AMR_AF=0.4135;AN=5008;CIEND=0,500;CIPOS=-500,0;CS=DEL_union;EAS_AF=0.1488;END=39287823;EUR_AF=0.4284;MC=BI_GS_DEL2_B1_P0290_1,YL_CN_ACB_2289,UW_VH_8301,SI_BD_8855;NS=2504;SAS_AF=0.3507;SVTYPE=DEL\tGT\t1|0\n8\t39303973\tBI_GS_DEL1_B5_P1438_306\tG\t<CN0>\t100\tPASS\tAC=1336;AF=0.266773;AFR_AF=0.093;AMR_AF=0.415;AN=5008;CIEND=-9,10;CIPOS=-9,10;CS=DEL_union;EAS_AF=0.1488;END=39308306;EUR_AF=0.4294;MC=UW_VH_24012,EM_DL_DEL95760;NS=2504;SAS_AF=0.3507;SVTYPE=DEL\tGT\t1|0\n8\t39306887\tBI_GS_DEL1_B2_P1438_218\tC\t<CN0>\t100\tPASS\tAC=1335;AF=0.266573;AFR_AF=0.0923;AMR_AF=0.4135;AN=5008;CIEND=-16,16;CIPOS=-16,16;CS=DEL_union;EAS_AF=0.1498;END=39312031;EUR_AF=0.4294;NS=2504;SAS_AF=0.3507;SVTYPE=DEL\tGT\t1|0\n8\t39311276\tYL_CN_LWK_1922\tT\t<CN0>\t100\tPASS\tAC=1334;AF=0.266374;AFR_AF=0.093;AMR_AF=0.4135;AN=5008;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0.1488;END=39321581;EUR_AF=0.4284;NS=2504;SAS_AF=0.3507;SVTYPE=DEL\tGT\t1|0\n8\t39737280\tDEL_pindel_25609\tACTACCTGTCAGATGGTCTGGAGGAAATTTGGCCCTGTAAATAGGGATTTGGCCACTTGATGAGTGTTTTCAATACCCATATGAAAAGTTTGGTGGAGGGTTTTAAGTATTTTCCACTGGCTGTCTTTGGGTATAAGTACCTTTCCTTCTTCTGTCATTAACCACCCTGAGGGGAGAAAACTATGCCCCCGCGAAAGTTCCCATTCTGTTTCAGTTGGGGAATACTGGGGC\tA\t.\tPASS\tAC=616;AF=0.123003;AFR_AF=0.0287;AMR_AF=0.196;AN=5008;CS=DEL_pindel;EAS_AF=0.1508;END=39737510;EUR_AF=0.174;NS=2504;SAS_AF=0.1176;SITEPOST=0.99705;SVTYPE=DEL\tGT\t1|0\n8\t39765314\tDEL_pindel_25611\tTAAGAAATAATATTTAAGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGAACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGTGTAGTGGCGCGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCAGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA\tT\t.\tPASS\tAC=2138;AF=0.426917;AFR_AF=0.5605;AMR_AF=0.4121;AN=5008;CS=DEL_pindel;EAS_AF=0.4087;END=39765646;EUR_AF=0.4344;MEINFO=AluYa5,1,281,+;NS=2504;SAS_AF=0.2679;SITEPOST=0.9919;SVTYPE=DEL_ALU\tGT\t0|1\n8\t39976061\tDEL_pindel_25617\tCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCACACCCGGCCAATACTTTCTTAACTATAGTCTGTGTGGCTTA\tC\t.\tPASS\tAC=2841;AF=0.567292;AFR_AF=0.4175;AMR_AF=0.6023;AN=5008;CS=DEL_pindel;EAS_AF=0.5645;END=39976151;EUR_AF=0.5765;NS=2504;SAS_AF=0.7382;SITEPOST=0.9998;SVTYPE=DEL\tGT\t1|0\n8\t40469706\tBI_GS_DEL1_B5_P1439_593\tA\t<CN0>\t100\tPASS\tAC=790;AF=0.157748;AFR_AF=0.0734;AMR_AF=0.2277;AN=5008;CIEND=-1,2;CIPOS=-1,2;CS=DEL_union;EAS_AF=0.003;END=40470386;EUR_AF=0.3479;MC=BI_GS_DEL1_B5_P1439_594,UW_VH_2313;NS=2504;SAS_AF=0.1861;SVTYPE=DEL\tGT\t1|0\n8\t40774597\tSI_BD_8864\tA\t<CN0>\t100\tPASS\tAC=2346;AF=0.46845;AFR_AF=0.4039;AMR_AF=0.5432;AN=5008;CIEND=-50,266;CIPOS=-266,87;CS=DEL_union;EAS_AF=0.498;END=40779782;EUR_AF=0.5656;MC=UW_VH_11737,UW_VH_4355,UW_VH_3507,UW_VH_4887,YL_CN_CHB_2020,UW_VH_21953,UW_VH_15399,UW_VH_17441,BI_GS_DEL1_B1_P1439_734,EM_DL_DEL95791,UW_VH_708,UW_VH_7248;NS=2504;SAS_AF=0.3722;SVTYPE=DEL\tGT\t1|1\n8\t41270468\tALU_umary_ALU_6696\tT\t<INS:ME:ALU>\t.\t.\tAC=2362;AF=0.471645;AFR_AF=0.2769;AMR_AF=0.366;AN=5008;CS=ALU_umary;EAS_AF=0.6756;EUR_AF=0.497;MEINFO=AluUndef,1,279,-;NS=2504;SAS_AF=0.5736;SITEPOST=1;SVLEN=278;SVTYPE=ALU;TSD=GACACATTTT\tGT\t1|1\n8\t41279328\tDEL_pindel_25648\tTAGATTAACCTTAAAAGGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGAGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAAGCCCAGGGGGCGGAGCCTGCAGTGAGCCGAGATTGCGCCACTGCACTCCAGCCTGGGCGACAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAA\tT\t.\tPASS\tAC=3114;AF=0.621805;AFR_AF=0.5908;AMR_AF=0.6023;AN=5008;CS=DEL_pindel;EAS_AF=0.6944;END=41279651;EUR_AF=0.5835;MEINFO=AluYe,1,281,+;NS=2504;SAS_AF=0.6421;SITEPOST=0.9672;SVTYPE=DEL_ALU\tGT\t1|0\n8\t42190387\tEM_DL_DEL95835\tA\t<CN0>\t100\tPASS\tAC=3326;AF=0.664137;AFR_AF=0.2277;AMR_AF=0.8617;AN=5008;CIEND=-150,150;CIPOS=-150,150;CS=DEL_union;EAS_AF=0.8343;END=42194352;EUR_AF=0.8738;MC=UW_VH_4634,SI_BD_8875,YL_CN_GWD_2754,UW_VH_710,UW_VH_7431,UW_VH_5170,UW_VH_20989;NS=2504;SAS_AF=0.7229;SVTYPE=DEL\tGT\t1|1\n8\t46991405\tYL_CN_CLM_1731\tC\t<CN0>\t100\tPASS\tAC=2147;AF=0.428714;AFR_AF=0.0749;AMR_AF=0.5245;AN=5008;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0.6002;END=46992654;EUR_AF=0.675;NS=2504;SAS_AF=0.409;SVTYPE=DEL\tGT\t0|1\n8\t46991586\tBI_GS_DEL1_B4_P1445_36\tT\t<CN0>\t100\tPASS\tAC=2140;AF=0.427316;AFR_AF=0.0719;AMR_AF=0.5245;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.5982;END=46992440;EUR_AF=0.674;MC=EM_DL_DEL101068058;NS=2504;SAS_AF=0.409;SVTYPE=DEL\tGT\t0|1\n8\t47405849\tBI_GS_DEL1_B4_P1446_76\tG\t<CN0>\t100\tPASS\tAC=2081;AF=0.415535;AFR_AF=0.0673;AMR_AF=0.5231;AN=5008;CIEND=-4,4;CIPOS=-4,4;CS=DEL_union;EAS_AF=0.6171;END=47407908;EUR_AF=0.669;MC=YL_CN_CHB_2034,EM_DL_DEL96363,YL_CN_ASW_2061;NS=2504;SAS_AF=0.3415;SVTYPE=DEL\tGT\t0|1\n8\t49045494\tALU_umary_ALU_6708\tT\t<INS:ME:ALU>\t.\t.\tAC=1214;AF=0.242412;AFR_AF=0.4047;AMR_AF=0.1931;AN=5008;CS=ALU_umary;EAS_AF=0.25;EUR_AF=0.0736;MEINFO=AluUndef,1,277,-;NS=2504;SAS_AF=0.2239;SITEPOST=1;SVLEN=276;SVTYPE=ALU;TSD=TTTAATAAAGTTTT\tGT\t1|0\n8\t52737961\tDEL_pindel_25786\tTAAGATATTTATGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGCGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCAGGAAGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCCGGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAA\tT\t.\tPASS\tAC=1696;AF=0.338658;AFR_AF=0.0673;AMR_AF=0.4308;AN=5008;CS=DEL_pindel;EAS_AF=0.3869;END=52738284;EUR_AF=0.4702;MEINFO=AluYb6_2,1,281,+;NS=2504;SAS_AF=0.455;SITEPOST=0.986;SVTYPE=DEL_ALU\tGT\t0|1\n8\t53895704\tBI_GS_DEL1_B4_P1452_190\tG\t<CN0>\t100\tPASS\tAC=70;AF=0.0139776;AFR_AF=0.0015;AMR_AF=0.0303;AN=5008;CIEND=0,1;CIPOS=0,1;CS=DEL_union;EAS_AF=0.004;END=53897189;EUR_AF=0.0149;MC=YL_CN_PEL_1801,SI_BD_8932,UW_VH_4332,EM_DL_DEL101070464;NS=2504;SAS_AF=0.0286;SVTYPE=DEL\tGT\t1|0\n8\t54204882\tDEL_pindel_25808\tTAGAAAAGCAAAATCGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGACGGGCGGATCACGAGGTCAGGAGATTGAGACCATCCTGGCTAACACGGTGAAACCCCGTCTCTACTAAAAATACAAAAATTAGCCGGGCGTGGTGGCGCGCGCCTGTAGTCCCAGCTACACGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCGCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAAACTCCGTCTCAAAAAAAAAAAAAAAAAGAAAA\tT\t.\tPASS\tAC=1604;AF=0.320288;AFR_AF=0.4758;AMR_AF=0.2896;AN=5008;CS=DEL_pindel;EAS_AF=0.2302;END=54205198;EUR_AF=0.1889;MEINFO=AluYg,1,281,+;NS=2504;SAS_AF=0.3599;SITEPOST=0.9996;SVTYPE=DEL_ALU\tGT\t1|0\n8\t56401202\tDEL_pindel_25859\tTAAAAAGACCAATGGTGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTTTCAAAAAAAAAAAAAAAAAAAAA\tT\t.\tPASS\tAC=2769;AF=0.552915;AFR_AF=0.6263;AMR_AF=0.5476;AN=5008;CS=DEL_pindel;EAS_AF=0.5;END=56401518;EUR_AF=0.5447;MEINFO=AluYa5,1,281,+;NS=2504;SAS_AF=0.5204;SITEPOST=0.9929;SVTYPE=DEL_ALU\tGT\t1|0\n8\t56658598\tDEL_pindel_25862\tGTGCGGTGGCTTGTGCCTGTAATCCCAGCACTTTGGGAGGCCAAGACAGGTGGATCACTTGAGCCCAGGAGTTCGAGACCAGCCTGGGCAACATGGCAAAACCCTGTCTCTACAAAAAAATGTAAAAATTATCCAGT\tG\t.\tPASS\tAC=2428;AF=0.484824;AFR_AF=0.4372;AMR_AF=0.5187;AN=5008;CS=DEL_pindel;EAS_AF=0.502;END=56658734;EUR_AF=0.5209;NS=2504;SAS_AF=0.4703;SITEPOST=0.98615;SVTYPE=DEL\tGT\t1|1\n8\t56676277\tDEL_pindel_25863\tATCAATATCTACCTAATTCAGTAAAAGTAACCCAATTCTTTACGAAATGATTACATACATTAATGGATATTGTTTTTTTATAGAGAAACAGATTTACAAAAGTTCATTATGCAATAAAAATTTATCAGTAC\tA\t.\tPASS\tAC=4308;AF=0.860224;AFR_AF=0.739;AMR_AF=0.8732;AN=5008;CS=DEL_pindel;EAS_AF=0.9891;END=56676407;EUR_AF=0.8897;NS=2504;SAS_AF=0.8517;SITEPOST=1;SVTYPE=DEL\tGT\t1|1\n8\t59078452\tDEL_pindel_25893\tTAGAAATTCTGCCGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAAAAAAAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCATGCAGTGAGCCGAGATTGCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA\tT\t.\tPASS\tAC=3676;AF=0.734026;AFR_AF=0.8238;AMR_AF=0.6671;AN=5008;CS=DEL_pindel;EAS_AF=0.7768;END=59078788;EUR_AF=0.7207;MEINFO=AluYa4_5,1,281,+;NS=2504;SAS_AF=0.6299;SITEPOST=0.9954;SVTYPE=DEL_ALU\tGT\t1|0\n8\t61204986\tDEL_pindel_25911\tAGACACTGTCCTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC\tA\t.\tPASS\tAC=1408;AF=0.28115;AFR_AF=0.2746;AMR_AF=0.3112;AN=5008;CS=DEL_pindel;EAS_AF=0.1766;END=61205303;EUR_AF=0.3579;MEINFO=AluYa4_5,1,281,-;NS=2504;SAS_AF=0.2975;SITEPOST=1;SVTYPE=DEL_ALU\tGT\t1|0\n8\t61945872\tDEL_pindel_25941\tCCTGGTGTCTTTCCCCTCCTCCTGGGGTAGCAGGGCAGCCTGGCTTGTTCTTCTCCCAAGGATGACAGAAATGCAGAAAAGCAAGCAGTCACAAGTCCTTTGCTTGCATGAAGTCCGCTGTCATCCCATTATCCAGAGCAAGTCACAGGG\tC\t.\tPASS\tAC=1993;AF=0.397963;AFR_AF=0.3343;AMR_AF=0.3184;AN=5008;CS=DEL_pindel;EAS_AF=0.4464;END=61946021;EUR_AF=0.4712;NS=2504;SAS_AF=0.4151;SITEPOST=0.9988;SVTYPE=DEL\tGT\t0|1\n8\t62169158\tDEL_pindel_25953\tCAAAAAAATATTATTTTAAAAACTAACCTACTCTTTATCTCAAAAACAAAAA\tC\t.\tPASS\tAC=1599;AF=0.319289;AFR_AF=0.3744;AMR_AF=0.2983;AN=5008;CS=DEL_pindel;EAS_AF=0.381;END=62169209;EUR_AF=0.2058;NS=2504;SAS_AF=0.3129;SITEPOST=0.9979;SVTYPE=DEL\tGT\t0|1\n8\t62930143\tDEL_pindel_25972\tTATATTCTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCATTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCACGCCCGGCC\tT\t.\tPASS\tAC=1845;AF=0.368411;AFR_AF=0.6846;AMR_AF=0.2406;AN=5008;CS=DEL_pindel;EAS_AF=0.3581;END=62930455;EUR_AF=0.2406;MEINFO=AluYa5,1,281,-;NS=2504;SAS_AF=0.1738;SITEPOST=0.9984;SVTYPE=DEL_ALU\tGT\t0|1\n8\t63034973\tBI_GS_DEL1_B1_P1462_40\tT\t<CN0>\t100\tPASS\tAC=180;AF=0.0359425;AFR_AF=0.0613;AMR_AF=0.0447;AN=5008;CIEND=-13,14;CIPOS=-13,14;CS=DEL_union;EAS_AF=0.0169;END=63040435;EUR_AF=0.0368;MC=EM_DL_DEL96720,YL_CN_GBR_1952,UW_VH_6362,SI_BD_8976,UW_VH_3218;NS=2504;SAS_AF=0.0143;SVTYPE=DEL\tGT\t0|1\n8\t64144864\tDEL_pindel_25999\tTGTCTTCCTTTCTTTTCTTTTTTTTCTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATC\tT\t.\tPASS\tAC=540;AF=0.107827;AFR_AF=0.2005;AMR_AF=0.1124;AN=5008;CS=DEL_pindel;EAS_AF=0.123;END=64145115;EUR_AF=0.0278;MEINFO=AluY,75,281,-;NS=2504;SAS_AF=0.046;SITEPOST=0.9968;SVTYPE=DEL_ALU\tGT\t0|1\n8\t66311348\tDEL_pindel_26028\tATCTGAAGGTCTCTTGTAATAGATGATAATATGATCTCTGTACACTGGCTTTGTCACAAATGTGAAATATGCCCTGCTAAGCACTAGATGAAATTGTGACACTGTTCCTGGAAAGAATTCTC\tA\t.\tPASS\tAC=1276;AF=0.254792;AFR_AF=0.2617;AMR_AF=0.2853;AN=5008;CS=DEL_pindel;EAS_AF=0.001;END=66311469;EUR_AF=0.504;NS=2504;SAS_AF=0.229;SITEPOST=1;SVTYPE=DEL\tGT\t1|1\n8\t70357613\tDEL_pindel_26113\tACAGGTTATGAGTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGC\tA\t.\tPASS\tAC=1815;AF=0.36242;AFR_AF=0.4463;AMR_AF=0.3357;AN=5008;CS=DEL_pindel;EAS_AF=0.3869;END=70357926;EUR_AF=0.2932;MEINFO=AluYa5,2,281,-;NS=2504;SAS_AF=0.3139;SITEPOST=0.9995;SVTYPE=DEL_ALU\tGT\t1|0\n8\t71914591\tALU_umary_ALU_6806\tA\t<INS:ME:ALU>\t.\t.\tAC=825;AF=0.164736;AFR_AF=0.0976;AMR_AF=0.1931;AN=5008;CS=ALU_umary;EAS_AF=0.0615;EUR_AF=0.3777;MEINFO=AluUndef,4,270,+;NS=2504;SAS_AF=0.1227;SITEPOST=1;SVLEN=266;SVTYPE=ALU;TSD=AAAATAAAAGCTA\tGT\t1|1\n8\t72551405\tDEL_pindel_26143\tAGTTTCACTATATCGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAATGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATT\tA\t.\tPASS\tAC=2690;AF=0.537141;AFR_AF=0.5159;AMR_AF=0.5202;AN=5008;CS=DEL_pindel;EAS_AF=0.5258;END=72551739;EUR_AF=0.6233;MEINFO=AluYa5,1,281,+;NS=2504;SAS_AF=0.501;SITEPOST=0.9942;SVTYPE=DEL_ALU\tGT\t0|1\n8\t74607596\tDEL_pindel_26197\tGCCAGAAAGGAACCCACTGCCTTGAAGGTAAGGACTCAATCCTGGCAGGATTCATTACCTGCTGACCAAAGAACCAATGGGTCCTGAA\tG\t.\tPASS\tAC=380;AF=0.0758786;AFR_AF=0.0734;AMR_AF=0.0418;AN=5008;CS=DEL_pindel;EAS_AF=0.1062;END=74607683;EUR_AF=0.0636;NS=2504;SAS_AF=0.0849;SITEPOST=0.99955;SVTYPE=DEL\tGT\t1|0\n8\t74787761\tDEL_pindel_26202\tTGTATAATATGGCATTTTAAAAAAAATACAGTTCCTCTTAGAGCTTAAGTAACTTCAGCAGCAGCAGCAACATCCTGGTGTGGGTTAGATAAATCTAC\tT\t.\tPASS\tAC=461;AF=0.0920527;AFR_AF=0.1528;AMR_AF=0.072;AN=5008;CS=DEL_pindel;EAS_AF=0.004;END=74787858;EUR_AF=0.1262;NS=2504;SAS_AF=0.0798;SITEPOST=1;SVTYPE=DEL\tGT\t1|0\n8\t74833794\tBI_GS_DEL1_B1_P1473_691\tC\t<CN0>\t100\tPASS\tAC=11;AF=0.00219649;AFR_AF=0;AMR_AF=0;AN=5008;CIEND=-43,43;CIPOS=-43,43;CS=DEL_union;EAS_AF=0;END=74837515;EUR_AF=0.0089;MC=UW_VH_3062;NS=2504;SAS_AF=0.002;SVTYPE=DEL\tGT\t1|0\n8\t75362835\tSI_BD_9058\tC\t<CN0>\t100\tPASS\tAC=3403;AF=0.679513;AFR_AF=0.7156;AMR_AF=0.6182;AN=5008;CIEND=-50,264;CIPOS=-264,50;CS=DEL_union;EAS_AF=0.6409;END=75366959;EUR_AF=0.6173;MC=EM_DL_DEL96977,UW_VH_14615,UW_VH_21750,UW_VH_1988,YL_CN_TSI_1924,UW_VH_11393;NS=2504;SAS_AF=0.7781;SVTYPE=DEL\tGT\t1|0\n8\t75375346\tALU_umary_ALU_6839\tC\t<INS:ME:ALU>\t.\t.\tAC=2612;AF=0.521565;AFR_AF=0.5287;AMR_AF=0.4971;AN=5008;CS=ALU_umary;EAS_AF=0.5208;EUR_AF=0.5338;MEINFO=AluUndef,1,280,+;NS=2504;SAS_AF=0.5174;SITEPOST=1;SVLEN=279;SVTYPE=ALU;TSD=AAGATTGATCCTC\tGT\t1|0\n8\t76126888\tDEL_pindel_26220\tTTCAAACTATATTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC\tT\t.\tPASS\tAC=3036;AF=0.60623;AFR_AF=0.6997;AMR_AF=0.487;AN=5008;CS=DEL_pindel;EAS_AF=0.5903;END=76127212;EUR_AF=0.5686;MEINFO=AluYa5,1,281,-;NS=2504;SAS_AF=0.6196;SITEPOST=0.9931;SVTYPE=DEL_ALU\tGT\t1|1\n8\t76138134\tDEL_pindel_26221\tATTCCCGTTGTTACATCATTTTGCAAGTTCCTCAACAATAACTGAGATACACTTTTCT\tA\t.\tPASS\tAC=2642;AF=0.527556;AFR_AF=0.8139;AMR_AF=0.4597;AN=5008;CS=DEL_pindel;EAS_AF=0.3036;END=76138191;EUR_AF=0.5596;NS=2504;SAS_AF=0.3865;SITEPOST=0.9998;SVTYPE=DEL\tGT\t1|1\n8\t81767595\tALU_umary_ALU_6877\tT\t<INS:ME:ALU>\t.\t.\tAC=141;AF=0.028155;AFR_AF=0.0265;AMR_AF=0.0288;AN=5008;CS=ALU_umary;EAS_AF=0.001;EUR_AF=0.0656;MEINFO=AluYa5,1,281,+;NS=2504;SAS_AF=0.0194;SITEPOST=1;SVLEN=280;SVTYPE=ALU;TSD=AAAAAATCTTTGCTT\tGT\t1|0\n8\t83351478\tALU_umary_ALU_6887\tG\t<INS:ME:ALU>\t.\t.\tAC=575;AF=0.114816;AFR_AF=0.0182;AMR_AF=0.2161;AN=5008;CS=ALU_umary;EAS_AF=0.2242;EUR_AF=0.1044;MEINFO=AluYb8,1,281,+;NS=2504;SAS_AF=0.0716;SITEPOST=1;SVLEN=280;SVTYPE=ALU;TSD=AAGAGTAAAAAGGTGG\tGT\t0|1\n8\t84296948\tDEL_pindel_26386\tTAAGAAAATCCTACCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAA\tT\t.\tPASS\tAC=2807;AF=0.560503;AFR_AF=0.702;AMR_AF=0.5288;AN=5008;CS=DEL_pindel;EAS_AF=0.622;END=84297096;EUR_AF=0.3748;MEINFO=AluYa,163,281,+;NS=2504;SAS_AF=0.5194;SITEPOST=0.9968;SVTYPE=DEL_ALU\tGT\t1|1\n8\t84349766\tDEL_pindel_26388\tTATAAGGGCCAGAGACTTCTCAATTTAGTATAGCATATGAAATTATAAATTCTAGAAGCTCAGAGAACCCAAAG\tT\t.\tPASS\tAC=663;AF=0.132388;AFR_AF=0.2065;AMR_AF=0.0778;AN=5008;CS=DEL_pindel;EAS_AF=0.2004;END=84349839;EUR_AF=0.0716;NS=2504;SAS_AF=0.0634;SITEPOST=0.9991;SVTYPE=DEL\tGT\t0|1\n8\t84959372\tDEL_pindel_26394\tTATATATCTACCTATCTATCTATACACACATATATATATATATATATATATATATATATATATATATATATATATTTTTTTTTTTTTTTCCCTCCAAATATGAATGTCCATGGTATAGGAACAGGGTAACATGTCCAAGGCCATGGTATAGGAACAGAGTAACAGGGACTTAATGTAGAGTAGA\tT\t.\tPASS\tAC=2158;AF=0.430911;AFR_AF=0.2284;AMR_AF=0.5432;AN=5008;CS=DEL_pindel;EAS_AF=0.3988;END=84959555;EUR_AF=0.5577;NS=2504;SAS_AF=0.5276;SITEPOST=0.9998;SVTYPE=DEL\tGT\t1|0\n8\t85437274\tALU_umary_ALU_6900\tT\t<INS:ME:ALU>\t.\t.\tAC=1404;AF=0.280351;AFR_AF=0.2277;AMR_AF=0.268;AN=5008;CS=ALU_umary;EAS_AF=0.2351;EUR_AF=0.2873;MEINFO=AluUndef,1,281,-;NS=2504;SAS_AF=0.3998;SITEPOST=1;SVLEN=280;SVTYPE=ALU;TSD=CGGCCTCAATTTT\tGT\t1|1\n8\t87315040\tL1_umary_LINE1_1704\tC\t<INS:ME:LINE1>\t.\t.\tAC=1830;AF=0.365415;AFR_AF=0.1248;AMR_AF=0.4467;AN=5008;CS=L1_umary;EAS_AF=0.4742;EUR_AF=0.4344;MEINFO=LINE1,5921,6019,-;NS=2504;SAS_AF=0.4499;SITEPOST=1;SVLEN=98;SVTYPE=LINE1;TSD=null\tGT\t1|1\n8\t89392207\tDEL_pindel_26463\tTCAATTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGC\tT\t.\tPASS\tAC=4273;AF=0.853235;AFR_AF=0.8222;AMR_AF=0.8646;AN=5008;CS=DEL_pindel;EAS_AF=0.8433;END=89392514;EUR_AF=0.8817;MEINFO=AluYa4_4,2,281,-;NS=2504;SAS_AF=0.8681;SITEPOST=0.99;SVTYPE=DEL_ALU\tGT\t0|1\n8\t91069173\tDEL_pindel_26494\tTTCAACTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACGACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC\tT\t.\tPASS\tAC=2141;AF=0.427516;AFR_AF=0.4002;AMR_AF=0.4582;AN=5008;CS=DEL_pindel;EAS_AF=0.5873;END=91069495;EUR_AF=0.2863;MEINFO=AluYa5,1,281,-;NS=2504;SAS_AF=0.4233;SITEPOST=0.9989;SVTYPE=DEL_ALU\tGT\t0|1\n8\t92677086\tALU_umary_ALU_6942\tA\t<INS:ME:ALU>\t.\t.\tAC=1206;AF=0.240815;AFR_AF=0.0847;AMR_AF=0.2983;AN=5008;CS=ALU_umary;EAS_AF=0.3323;EUR_AF=0.3161;MEINFO=AluYa5,8,281,+;NS=2504;SAS_AF=0.2393;SITEPOST=1;SVLEN=273;SVTYPE=ALU;TSD=AAAAAAATTAAAATA\tGT\t0|1\n8\t96345249\tDEL_pindel_26587\tCATATATATATATATATATATATATATATATATATATATATATATATTTATATATATATATATATATATATATTTATATATATATATATATATATATATATTTATATATATATATATATATATATATTTATATATATAT\tC\t.\tPASS\tAC=3480;AF=0.694888;AFR_AF=0.5855;AMR_AF=0.7536;AN=5008;CS=DEL_pindel;EAS_AF=0.7847;END=96345387;EUR_AF=0.6372;NS=2504;SAS_AF=0.7679;SITEPOST=0.94515;SVTYPE=DEL\tGT\t0|1\n8\t97098073\tDEL_pindel_26597\tTGAAAGAGAGGTATTAGGCTGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACAAGGTCAGGAGATCGAGACCATCTTGGCTAACACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGCGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCTGGGAGGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAATCCGGCCTGGGCTAAACAGCGGGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA\tT\t.\tPASS\tAC=4015;AF=0.801717;AFR_AF=0.7905;AMR_AF=0.7896;AN=5008;CS=DEL_pindel;EAS_AF=0.8274;END=97098425;EUR_AF=0.7883;MEINFO=AluYb,1,281,+;NS=2504;SAS_AF=0.8129;SITEPOST=0.9736;SVTYPE=DEL_ALU\tGT\t1|1\n8\t98595392\tDEL_pindel_26628\tAAAAAATAATAAATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCCGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC\tA\t.\tPASS\tAC=3417;AF=0.682308;AFR_AF=0.6853;AMR_AF=0.6744;AN=5008;CS=DEL_pindel;EAS_AF=0.6925;END=98595731;EUR_AF=0.7068;MEINFO=AluYb6_2,1,281,-;NS=2504;SAS_AF=0.6483;SITEPOST=0.95045;SVTYPE=DEL_ALU\tGT\t0|1\n8\t98783448\tDEL_pindel_26631\tTAATTTCCTTAGTCGCCGGGCGCAGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCAAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA\tT\t.\tPASS\tAC=2946;AF=0.588259;AFR_AF=0.6634;AMR_AF=0.5331;AN=5008;CS=DEL_pindel;EAS_AF=0.6042;END=98783780;EUR_AF=0.5318;MEINFO=AluYa5,2,281,+;NS=2504;SAS_AF=0.5675;SITEPOST=0.9808;SVTYPE=DEL_ALU\tGT\t1|1\n8\t100782579\tALU_umary_ALU_6981\tT\t<INS:ME:ALU>\t.\t.\tAC=111;AF=0.0221645;AFR_AF=0.0166;AMR_AF=0.0288;AN=5008;CS=ALU_umary;EAS_AF=0.0298;EUR_AF=0.0288;MEINFO=AluUndef,1,268,+;NS=2504;SAS_AF=0.0102;SITEPOST=1;SVLEN=267;SVTYPE=ALU;TSD=null\tGT\t1|0\n8\t105900483\tALU_umary_ALU_7003\tT\t<INS:ME:ALU>\t.\t.\tAC=630;AF=0.125799;AFR_AF=0.2254;AMR_AF=0.0821;AN=5008;CS=ALU_umary;EAS_AF=0.0605;EUR_AF=0.1223;MEINFO=AluYa5,1,281,+;NS=2504;SAS_AF=0.093;SITEPOST=1;SVLEN=280;SVTYPE=ALU;TSD=ATATACTTGATTTCCT\tGT\t0|1\n8\t106664522\tALU_umary_ALU_7006\tT\t<INS:ME:ALU>\t.\t.\tAC=1541;AF=0.307708;AFR_AF=0.3744;AMR_AF=0.2853;AN=5008;CS=ALU_umary;EAS_AF=0.3343;EUR_AF=0.2982;MEINFO=AluUndef,1,279,-;NS=2504;SAS_AF=0.2157;SITEPOST=1;SVLEN=278;SVTYPE=ALU;TSD=AGCCCATTTTT\tGT\t1|1\n8\t106670518\tDEL_pindel_26759\tTAGAAATCAAAGCAGACGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGAGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCCAGGGGGCGGAGCCTGCAGTGAGCCGAGATTGCGCCACTGCACTCCAGCCTGGGCGACAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAA\tT\t.\tPASS\tAC=1923;AF=0.383986;AFR_AF=0.4864;AMR_AF=0.3703;AN=5008;CS=DEL_pindel;EAS_AF=0.4008;END=106670838;EUR_AF=0.3598;MEINFO=AluYe,1,281,+;NS=2504;SAS_AF=0.2628;SITEPOST=0.99895;SVTYPE=DEL_ALU\tGT\t1|0\n8\t106703448\tDEL_pindel_26761\tTCCCAAAGAGACTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCCGGACTGCGGACTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCCGGGACTACGGGCGCCCGCCACCGCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCAGC\tT\t.\tPASS\tAC=453;AF=0.0904553;AFR_AF=0.1528;AMR_AF=0.0533;AN=5008;CS=DEL_pindel;EAS_AF=0.0268;END=106703774;EUR_AF=0.0755;MEINFO=AluY,2,281,-;NS=2504;SAS_AF=0.1135;SITEPOST=1;SVTYPE=DEL_ALU\tGT\t0|1\n8\t107207888\tALU_umary_ALU_7009\tT\t<INS:ME:ALU>\t.\t.\tAC=2248;AF=0.448882;AFR_AF=0.0711;AMR_AF=0.4597;AN=5008;CS=ALU_umary;EAS_AF=0.6478;EUR_AF=0.5547;MEINFO=AluUndef,1,277,-;NS=2504;SAS_AF=0.638;SITEPOST=1;SVLEN=276;SVTYPE=ALU;TSD=GACACTTTTT\tGT\t0|1\n8\t107511093\tDEL_pindel_26776\tTAAAGAATTAGGAGATGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCATGAGGTCGGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGCGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCCGGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAA\tT\t.\tPASS\tAC=2375;AF=0.474241;AFR_AF=0.5582;AMR_AF=0.5389;AN=5008;CS=DEL_pindel;EAS_AF=0.3135;END=107511418;EUR_AF=0.5398;MEINFO=AluYb6_2,1,281,+;NS=2504;SAS_AF=0.4131;SITEPOST=0.9955;SVTYPE=DEL_ALU\tGT\t0|1\n8\t108120234\tDEL_pindel_26796\tGGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGCGGTGGCAGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCCGGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAGAATGCATGAACATTGGA\tG\t.\tPASS\tAC=1816;AF=0.36262;AFR_AF=0.32;AMR_AF=0.3991;AN=5008;CS=DEL_pindel;EAS_AF=0.3343;END=108120557;EUR_AF=0.4076;MEINFO=AluYb3a1,1,281,+;NS=2504;SAS_AF=0.3773;SITEPOST=0.98255;SVTYPE=DEL_ALU\tGT\t0|1\n8\t109135936\tSVA_umary_SVA_389\tG\t<INS:ME:SVA>\t.\t.\tAC=777;AF=0.155152;AFR_AF=0.112;AMR_AF=0.1628;AN=5008;CS=SVA_umary;EAS_AF=0.0972;EUR_AF=0.2237;MEINFO=SVA,7,1606,+;NS=2504;SAS_AF=0.1973;SITEPOST=1;SVLEN=1599;SVTYPE=SVA;TSD=AAAAGAATATTTATG\tGT\t1|0\n8\t112294057\tUW_VH_3651\tA\t<CN0>\t100\tPASS\tAC=1754;AF=0.35024;AFR_AF=0.1831;AMR_AF=0.4193;AN=5008;CIEND=0,526;CIPOS=-432,0;CS=DEL_union;EAS_AF=0.1984;END=112297142;EUR_AF=0.6988;MC=BI_GS_DEL1_B2_P1511_188,UW_VH_6973,YL_CN_GWD_2856,UW_VH_4593,SI_BD_9253,UW_VH_736,EM_DL_DEL98017,UW_VH_5300;NS=2504;SAS_AF=0.3252;SVTYPE=DEL\tGT\t1|1\n8\t113225848\tDEL_pindel_26878\tTACACTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGTCGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC\tT\t.\tPASS\tAC=2910;AF=0.58107;AFR_AF=0.7042;AMR_AF=0.5187;AN=5008;CS=DEL_pindel;EAS_AF=0.6359;END=113226191;EUR_AF=0.4821;MEINFO=AluYb6_2,1,281,-;NS=2504;SAS_AF=0.5041;SITEPOST=0.9894;SVTYPE=DEL_ALU\tGT\t1|0\n8\t114862620\tDEL_pindel_26905\tCATTCATCCTATGTAACCCTACAGCATTATTTAAATTTTAAATATGATTTTAAATAAATACACATTTGTTTGAGCCTTAAAGAAAGGTTGATACTATAGCTAAAATCAACAAATGCTCAATAAAAGCAGTGAAT\tC\t.\tPASS\tAC=809;AF=0.161542;AFR_AF=0.1097;AMR_AF=0.134;AN=5008;CS=DEL_pindel;EAS_AF=0.1885;END=114862753;EUR_AF=0.1899;NS=2504;SAS_AF=0.1943;SITEPOST=0.99865;SVTYPE=DEL\tGT\t1|0\n8\t114934391\tBI_GS_DEL1_B5_P1513_958\tA\t<CN0>\t100\tPASS\tAC=3741;AF=0.747005;AFR_AF=0.73;AMR_AF=0.6153;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.5794;END=114934683;EUR_AF=0.8986;MC=DEL_pindel_26908,UW_VH_25344,UW_VH_739;NS=2504;SAS_AF=0.8804;SVTYPE=DEL\tGT\t1|1\n8\t115079316\tBI_GS_DEL1_B4_P1514_24\tA\t<CN0>\t100\tPASS\tAC=506;AF=0.101038;AFR_AF=0.1407;AMR_AF=0.0865;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.0198;END=115080675;EUR_AF=0.1799;MC=SI_BD_9267,UW_VH_1819;NS=2504;SAS_AF=0.0603;SVTYPE=DEL\tGT\t0|1\n8\t117047019\tALU_umary_ALU_7081\tA\t<INS:ME:ALU>\t.\t.\tAC=2032;AF=0.405751;AFR_AF=0.4614;AMR_AF=0.3617;AN=5008;CS=ALU_umary;EAS_AF=0.375;EUR_AF=0.3817;MEINFO=AluUndef,35,281,+;NS=2504;SAS_AF=0.4182;SITEPOST=1;SVLEN=246;SVTYPE=ALU;TSD=AATAAAGACATAACCAA\tGT\t0|1\n8\t118223529\tDEL_pindel_26968\tCCCAAAAGCTTCTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGTCGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCATGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCCGCCTCGGCCTCCCAA\tC\t.\tPASS\tAC=3232;AF=0.645367;AFR_AF=0.5802;AMR_AF=0.7032;AN=5008;CS=DEL_pindel;EAS_AF=0.6895;END=118223809;EUR_AF=0.6342;MEINFO=AluYb6_2,39,281,-;NS=2504;SAS_AF=0.6585;SITEPOST=0.9753;SVTYPE=DEL_ALU\tGT\t0|1\n8\t118712788\tDEL_pindel_26976\tTCTATGGAACTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCTTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGC\tT\t.\tPASS\tAC=3279;AF=0.654752;AFR_AF=0.6974;AMR_AF=0.7046;AN=5008;CS=DEL_pindel;EAS_AF=0.6548;END=118713119;EUR_AF=0.6412;MEINFO=AluYa5,2,281,-;NS=2504;SAS_AF=0.5757;SITEPOST=0.97925;SVTYPE=DEL_ALU\tGT\t1|0\n8\t119165526\tDEL_pindel_26991\tAGTCCTAATAGGGATGAGTGAAGAGCCAAAGGGCAAGCCCCACTGCACAAGCACATTTGAGCCCTTTGCTCAT\tA\t.\tPASS\tAC=1118;AF=0.223243;AFR_AF=0.1831;AMR_AF=0.2954;AN=5008;CS=DEL_pindel;EAS_AF=0.2163;END=119165598;EUR_AF=0.2565;NS=2504;SAS_AF=0.1994;SITEPOST=1;SVTYPE=DEL\tGT\t1|0\n8\t119447044\tDEL_pindel_26997\tTAAAGTGTGCTTCTGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGTGAGACTCCATCTCAAAAAAAAAAAAAA\tT\t.\tPASS\tAC=2407;AF=0.480631;AFR_AF=0.3805;AMR_AF=0.5749;AN=5008;CS=DEL_pindel;EAS_AF=0.4573;END=119447355;EUR_AF=0.5517;MEINFO=AluYa5,1,281,+;NS=2504;SAS_AF=0.5;SITEPOST=0.9957;SVTYPE=DEL_ALU\tGT\t1|0\n8\t121681672\tDEL_pindel_27059\tTGAAAATGCTTGTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCCGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCTGCCACCGCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCCACCCGCCTTGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC\tT\t.\tPASS\tAC=2381;AF=0.475439;AFR_AF=0.7209;AMR_AF=0.4207;AN=5008;CS=DEL_pindel;EAS_AF=0.3214;END=121681991;EUR_AF=0.4135;MEINFO=AluYb3a1,1,281,-;NS=2504;SAS_AF=0.4049;SITEPOST=0.9988;SVTYPE=DEL_ALU\tGT\t0|1\n8\t121854760\tDEL_pindel_27063\tTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACACCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCTGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCACCCGGCCGGAAAACATATTTTTTA\tT\t.\tPASS\tAC=576;AF=0.115016;AFR_AF=0.1914;AMR_AF=0.1254;AN=5008;CS=DEL_pindel;EAS_AF=0.0774;END=121855078;EUR_AF=0.0567;MEINFO=AluYa5,1,281,-;NS=2504;SAS_AF=0.1033;SITEPOST=0.9993;SVTYPE=DEL_ALU\tGT\t1|1\n8\t121930605\tDEL_pindel_27066\tCATATATATATATATATATATATATATATATATATATATATATACACATATATATATATATATATATATATATATATACACATATATATATATATATATATATACACAT\tC\t.\tPASS\tAC=1426;AF=0.284744;AFR_AF=0.3177;AMR_AF=0.2291;AN=5008;CS=DEL_pindel;EAS_AF=0.2827;END=121930713;EUR_AF=0.3231;NS=2504;SAS_AF=0.2423;SITEPOST=0.9985;SVTYPE=DEL\tGT\t1|0\n8\t124680183\tALU_umary_ALU_7114\tT\t<INS:ME:ALU>\t.\t.\tAC=1602;AF=0.319888;AFR_AF=0.1127;AMR_AF=0.3862;AN=5008;CS=ALU_umary;EAS_AF=0.4127;EUR_AF=0.4563;MEINFO=AluYa5,1,281,+;NS=2504;SAS_AF=0.317;SITEPOST=1;SVLEN=280;SVTYPE=ALU;TSD=AAAAGAACTCAGGT\tGT\t1|0\n8\t125889970\tALU_umary_ALU_7124\tT\t<INS:ME:ALU>\t.\t.\tAC=2755;AF=0.55012;AFR_AF=0.4766;AMR_AF=0.5;AN=5008;CS=ALU_umary;EAS_AF=0.5645;EUR_AF=0.6233;MEINFO=AluYa5,23,274,-;NS=2504;SAS_AF=0.5951;SITEPOST=1;SVLEN=251;SVTYPE=ALU;TSD=TTCTTCTGATCTT\tGT\t0|1\n8\t127192196\tUW_VH_14572\tT\t<CN0>\t100\tPASS\tAC=1902;AF=0.379792;AFR_AF=0.5598;AMR_AF=0.4049;AN=5008;CIEND=0,539;CIPOS=-448,0;CS=DEL_union;EAS_AF=0.3333;END=127194569;EUR_AF=0.2783;MC=UW_VH_21674,EM_DL_DEL98369,UW_VH_22764,YL_CN_CHS_2065,UW_VH_1499,SI_BD_9319,UW_VH_17269,BI_GS_DEL1_B1_P1526_178,YL_CN_ITU_2052;NS=2504;SAS_AF=0.271;SVTYPE=DEL\tGT\t1|0\n8\t129244941\tALU_umary_ALU_7145\tT\t<INS:ME:ALU>\t.\t.\tAC=959;AF=0.191494;AFR_AF=0.0719;AMR_AF=0.2478;AN=5008;CS=ALU_umary;EAS_AF=0.1885;EUR_AF=0.2972;MEINFO=AluYc1,2,281,-;NS=2504;SAS_AF=0.2076;SITEPOST=1;SVLEN=279;SVTYPE=ALU;TSD=TCCTTTCTCTTTT\tGT\t1|1\n8\t129708036\tALU_umary_ALU_7146\tC\t<INS:ME:ALU>\t.\t.\tAC=558;AF=0.111422;AFR_AF=0.0174;AMR_AF=0.1153;AN=5008;CS=ALU_umary;EAS_AF=0.0734;EUR_AF=0.2634;MEINFO=AluYa5,1,281,+;NS=2504;SAS_AF=0.1186;SITEPOST=1;SVLEN=280;SVTYPE=ALU;TSD=AAAAAAAAAATCTGTGCC\tGT\t0|1\n8\t132168283\tDEL_pindel_27297\tTCTTCCCTTCTTTTCTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTTGCTCTGTCGCCCAGGCTGGAGCGCAGTGGCATGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCACCCGCCACGACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGACTACAGGCGTGAGCCACCGCGCCCGGC\tT\t.\tPASS\tAC=2014;AF=0.402157;AFR_AF=0.2943;AMR_AF=0.4352;AN=5008;CS=DEL_pindel;EAS_AF=0.4851;END=132168596;EUR_AF=0.3926;MEINFO=AluYa,2,281,-;NS=2504;SAS_AF=0.4489;SITEPOST=0.9994;SVTYPE=DEL_ALU\tGT\t1|0\n8\t132277657\tUW_VH_4096\tT\t<CN0>\t100\tPASS\tAC=3120;AF=0.623003;AFR_AF=0.4713;AMR_AF=0.6369;AN=5008;CIEND=0,604;CIPOS=-432,0;CS=DEL_union;EAS_AF=0.7282;END=132280535;EUR_AF=0.6093;MC=YL_CN_ASW_2140,YL_CN_GBR_1989,UW_VH_14598,YL_CN_GWD_2883,YL_CN_MSL_1962,YL_CN_CEU_2619,YL_CN_MXL_1730,YL_CN_KHV_2115,YL_CN_PUR_2499,UW_VH_21545;NS=2504;SAS_AF=0.7239;SVTYPE=DEL\tGT\t1|0\n8\t137160271\tDUP_gs_CNV_8_137160271_137163814\tT\t<CN0>,<CN2>\t.\tPASS\tAC=1476,1;AF=0.294728,0.00019968;AFR_AF=0.2761,0;AMR_AF=0.3545,0;AN=5008;CS=DUP_gs;EAS_AF=0.0863,0.001;END=137163814;EUR_AF=0.5139,0;MC=YL_CN_CHB_2088,UW_VH_4218,UW_VH_4661,SI_BD_9384,UW_VH_4786,BI_GS_DEL1_B1_P1536_150,UW_VH_1987,UW_VH_24969,EM_DL_DEL98710,UW_VH_9889;NS=2504;SAS_AF=0.2669,0;SITEPOST=1;SVTYPE=CNV\tGT\t0|1\n8\t138742943\tUW_VH_752\tT\t<CN0>\t100\tPASS\tAC=3503;AF=0.699481;AFR_AF=0.2595;AMR_AF=0.8372;AN=5008;CIEND=0,490;CIPOS=-502,0;CS=DEL_union;EAS_AF=0.8403;END=138743864;EUR_AF=0.8718;MC=DEL_pindel_27417,YL_CN_GIH_1643,SI_BD_9393;NS=2504;SAS_AF=0.8742;SVTYPE=DEL\tGT\t1|1\n8\t138743347\tBI_GS_DEL1_B5_P1537_850\tA\t<CN0>\t100\tPASS\tAC=3528;AF=0.704473;AFR_AF=0.2784;AMR_AF=0.8386;AN=5008;CIEND=-47,48;CIPOS=-47,48;CS=DEL_union;EAS_AF=0.8353;END=138743803;EUR_AF=0.8748;NS=2504;SAS_AF=0.8753;SVTYPE=DEL\tGT\t1|1\n8\t138860548\tDEL_pindel_27424\tTAAAGAGAAGGATAGGCCGGGCGCGATGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGACGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCAGAGCTTGCAGTGAGCCGAGATCAGGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA\tT\t.\tPASS\tAC=2844;AF=0.567891;AFR_AF=0.3638;AMR_AF=0.5634;AN=5008;CS=DEL_pindel;EAS_AF=0.746;END=138860872;EUR_AF=0.5974;MEINFO=AluYa1_1,1,281,+;NS=2504;SAS_AF=0.6329;SITEPOST=0.9898;SVTYPE=DEL_ALU\tGT\t0|1\n8\t139325979\tALU_umary_ALU_7191\tC\t<INS:ME:ALU>\t.\t.\tAC=1883;AF=0.375998;AFR_AF=0.3752;AMR_AF=0.3112;AN=5008;CS=ALU_umary;EAS_AF=0.2798;EUR_AF=0.4483;MEINFO=AluUndef,2,274,+;NS=2504;SAS_AF=0.4479;SITEPOST=1;SVLEN=272;SVTYPE=ALU;TSD=AAGATACAAGCTAC\tGT\t0|1\n8\t140014070\tDEL_pindel_27440\tCCAGGCTGGGCTGCATCCTGCCCTGTGCTTTCACCTGTCACAGGCTGTGCTGCATCCTGCCCTGTGCATTCATCTGTCACAGGCTAGGCTGTGCCCTACCCTGTGCATTCATTTGTCA\tC\t.\tPASS\tAC=1487;AF=0.296925;AFR_AF=0.2663;AMR_AF=0.2752;AN=5008;CS=DEL_pindel;EAS_AF=0.3125;END=140014187;EUR_AF=0.3161;NS=2504;SAS_AF=0.318;SITEPOST=0.9974;SVTYPE=DEL\tGT\t0|1\n8\t143494784\tSI_BD_9453\tG\t<CN0>\t100\tPASS\tAC=3923;AF=0.783347;AFR_AF=0.792;AMR_AF=0.8084;AN=5008;CIEND=-50,270;CIPOS=-270,50;CS=DEL_union;EAS_AF=0.7054;END=143495714;EUR_AF=0.839;MC=BI_GS_DEL1_B1_P1542_407;NS=2504;SAS_AF=0.7771;SVTYPE=DEL\tGT\t0|1\n8\t145234823\tDEL_pindel_27619\tCCCTCTCACCAGGGCTCTGCTGCTCCTGCGTGTGGGGTCTCCTCAGCAGCCCCTCA\tC\t.\tPASS\tAC=1953;AF=0.389976;AFR_AF=0.2814;AMR_AF=0.4063;AN=5008;CS=DEL_pindel;EAS_AF=0.4296;END=145234878;EUR_AF=0.4235;NS=2504;SAS_AF=0.4499;SITEPOST=0.9983;SVTYPE=DEL\tGT\t1|0\n8\t145503113\tDEL_pindel_27621\tTGACCACCAAGGGCCATGACCGTCACGGGCCACGACCGCCATGGGCCATGACCCCCATGGGCCTCAAGACCACCACAGGCCAC\tT\t.\tPASS\tAC=1515;AF=0.302516;AFR_AF=0.3623;AMR_AF=0.2637;AN=5008;CS=DEL_pindel;EAS_AF=0.2113;END=145503195;EUR_AF=0.2823;NS=2504;SAS_AF=0.364;SITEPOST=0.98175;SVTYPE=DEL\tGT\t1|0\n8\t145645595\tBI_GS_DEL1_B3_P1544_9\tG\t<CN0>\t100\tPASS\tAC=122;AF=0.024361;AFR_AF=0.031;AMR_AF=0.0274;AN=5008;CIEND=-41,41;CIPOS=-41,41;CS=DEL_union;EAS_AF=0;END=145647589;EUR_AF=0.0537;MC=YL_CN_ACB_2404,EM_DL_DEL101106811,SI_BD_9486;NS=2504;SAS_AF=0.0082;SVTYPE=DEL\tGT\t0|1\n8\t146042931\tDEL_pindel_27640\tGGCCGGGCGCGGTGGCTCATGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGTGGGTGGATCACTTGAGGTCAGGAGATAGAGACCATCCTGGCCAACATAGTAAAACCCCATCTCTACTAAAAAGACAAAAATTA\tG\t.\tPASS\tAC=2516;AF=0.502396;AFR_AF=0.5;AMR_AF=0.5634;AN=5008;CS=DEL_pindel;EAS_AF=0.5308;END=146043066;EUR_AF=0.496;NS=2504;SAS_AF=0.4397;SITEPOST=0.9927;SVTYPE=DEL\tGT\t0|1\n8\t146057037\tUW_VH_754\tG\t<CN0>\t100\tPASS\tAC=2355;AF=0.470248;AFR_AF=0.3064;AMR_AF=0.5749;AN=5008;CIEND=0,510;CIPOS=-521,0;CS=DEL_union;EAS_AF=0.4196;END=146057833;EUR_AF=0.6461;MC=EM_DL_DEL101107101,BI_GS_DEL1_B5_P1545_51,SI_BD_9494;NS=2504;SAS_AF=0.4888;SVTYPE=DEL\tGT\t0|1\n8\t146192869\tBI_GS_DEL1_B3_P1545_13\tA\t<CN0>\t100\tPASS\tAC=2652;AF=0.529553;AFR_AF=0.2912;AMR_AF=0.4914;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.501;END=146193180;EUR_AF=0.7366;NS=2504;SAS_AF=0.6953;SVTYPE=DEL\tGT\t1|1\n9\t3780616\tDEL_pindel_27726\tTAAAGATATAAAAAATGATGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATTCTGGCTAACACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTGGTAGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCGCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAA\tT\t.\tPASS\tAC=3814;AF=0.761581;AFR_AF=0.739;AMR_AF=0.7709;AN=5008;CS=DEL_pindel;EAS_AF=0.8155;END=3780942;EUR_AF=0.7614;MEINFO=AluYc1,1,281,+;NS=2504;SAS_AF=0.7301;SITEPOST=0.938;SVTYPE=DEL_ALU\tGT\t1|0\n9\t4346658\tDEL_pindel_27751\tTAATAATGGATGGAGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCGCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAA\tT\t.\tPASS\tAC=4249;AF=0.848442;AFR_AF=0.7769;AMR_AF=0.8934;AN=5008;CS=DEL_pindel;EAS_AF=0.8413;END=4346969;EUR_AF=0.8897;MEINFO=AluYa4_5,2,281,+;NS=2504;SAS_AF=0.8783;SITEPOST=0.9873;SVTYPE=DEL_ALU\tGT\t1|1\n9\t6700382\tDUP_gs_CNV_9_6700382_6709249\tG\t<CN0>,<CN2>\t.\tPASS\tAC=259,4;AF=0.0517173,0.00079872;AFR_AF=0.0083,0;AMR_AF=0.0865,0.0029;AN=5008;CS=DUP_gs;EAS_AF=0.001,0;END=6709249;EUR_AF=0.1352,0.001;MC=BI_GS_DEL1_B3_P1552_28,YL_CN_CLM_1822,YL_CN_IBS_1870,YL_CN_PEL_1880,SI_BD_9554;NS=2504;SAS_AF=0.0521,0.001;SITEPOST=1;SVTYPE=CNV\tGT\t1|0\n9\t6701890\tBI_GS_DEL1_B1_P1552_571\tT\t<CN0>\t100\tPASS\tAC=200;AF=0.0399361;AFR_AF=0.0061;AMR_AF=0.0692;AN=5008;CIEND=-49,49;CIPOS=-49,49;CS=DEL_union;EAS_AF=0.003;END=6702631;EUR_AF=0.1103;NS=2504;SAS_AF=0.0307;SVTYPE=DEL\tGT\t1|0\n9\t6708608\tSI_BD_9555\tA\t<CN0>\t100\tPASS\tAC=334;AF=0.0666933;AFR_AF=0.0756;AMR_AF=0.0793;AN=5008;CIEND=-50,208;CIPOS=-208,50;CS=DEL_union;EAS_AF=0.001;END=6710744;EUR_AF=0.1292;MC=BI_GS_DEL1_B2_P1552_439,UW_VH_12196,YL_CN_GWD_2923;NS=2504;SAS_AF=0.0491;SVTYPE=DEL\tGT\t1|0\n9\t6999377\tDEL_pindel_27801\tTAAAAACAGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCAGAGGCGGGCGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACGCGGTGAAACCCCGCCTCTACTAAAAATACAAAAAATTAGCCGGGCGTGGTGGCGGGCGCCTGTGGTCCCGGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGGTCGCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAA\tT\t.\tPASS\tAC=4419;AF=0.882388;AFR_AF=0.8888;AMR_AF=0.8646;AN=5008;CS=DEL_pindel;EAS_AF=0.9018;END=6999684;EUR_AF=0.8608;MEINFO=AluYh7,1,281,+;NS=2504;SAS_AF=0.8885;SITEPOST=0.9999;SVTYPE=DEL_ALU\tGT\t1|1\n9\t7371803\tDEL_pindel_27816\tTGAAAAATAGTAGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACACAGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCTGGGCGAGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCCGGGGGCGGAGCCTGCAGTGAGCCGAGATCGCGCCACTGCACTCCGGCCTGGGCGACAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAA\tT\t.\tPASS\tAC=1426;AF=0.284744;AFR_AF=0.4372;AMR_AF=0.2767;AN=5008;CS=DEL_pindel;EAS_AF=0.12;END=7372116;EUR_AF=0.2823;MEINFO=AluYe,1,281,+;NS=2504;SAS_AF=0.2566;SITEPOST=0.9999;SVTYPE=DEL_ALU\tGT\t0|1\n9\t9950428\tDEL_pindel_27866\tTAAGAAGAAAGTGGAGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGAGGTGGTGGACGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCCAGGGGGCGGAGCCTGCAGTGAGCCGAGATCGCGCCACTGCACTCCAGCCTGGGCGACAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA\tT\t.\tPASS\tAC=2900;AF=0.579073;AFR_AF=0.733;AMR_AF=0.5115;AN=5008;CS=DEL_pindel;EAS_AF=0.7212;END=9950758;EUR_AF=0.3817;MEINFO=AluYe,1,281,+;NS=2504;SAS_AF=0.4755;SITEPOST=0.9932;SVTYPE=DEL_ALU\tGT\t0|1\n9\t10404415\tEM_DL_DEL101111593\tG\t<CN0>\t100\tPASS\tAC=3974;AF=0.79353;AFR_AF=0.68;AMR_AF=0.8199;AN=5008;CIEND=-150,150;CIPOS=-150,150;CS=DEL_union;EAS_AF=0.8829;END=10405176;EUR_AF=0.8569;NS=2504;SAS_AF=0.771;SVTYPE=DEL\tGT\t1|0\n9\t10404562\tBI_GS_DEL1_B2_P1556_238\tC\t<CN0>\t100\tPASS\tAC=3974;AF=0.79353;AFR_AF=0.68;AMR_AF=0.8199;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.8829;END=10405091;EUR_AF=0.8569;MC=DEL_pindel_27871,UW_VH_759;NS=2504;SAS_AF=0.771;SVTYPE=DEL\tGT\t1|0\n9\t10498740\tDEL_pindel_27872\tTAAAACCTTCTTGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAA\tT\t.\tPASS\tAC=4216;AF=0.841853;AFR_AF=0.7852;AMR_AF=0.8429;AN=5008;CS=DEL_pindel;EAS_AF=0.869;END=10499050;EUR_AF=0.8807;MEINFO=AluYa5,1,281,+;NS=2504;SAS_AF=0.8497;SITEPOST=0.9707;SVTYPE=DEL_ALU\tGT\t1|1\n9\t10828091\tDEL_pindel_27885\tTTTGAGTGACTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGCGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCTACCACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGGGCCACCGCGCCCGGCC\tT\t.\tPASS\tAC=1420;AF=0.283546;AFR_AF=0.1657;AMR_AF=0.2695;AN=5008;CS=DEL_pindel;EAS_AF=0.501;END=10828426;EUR_AF=0.2078;MEINFO=AluYc1,1,281,-;NS=2504;SAS_AF=0.3067;SITEPOST=0.9998;SVTYPE=DEL_ALU\tGT\t1|0\n9\t10908809\tDEL_pindel_27886\tCATGCCTGTAATCCCAGCACTTTAGGAGGCCGAGGTGGGTGGATCATTTGAGGTCAGGAGTTCGAGACCAGCCTGGCCAATATAGTGAAACCCGTTGTCTATTAAAAATACAAAAATTAGCCAGGCAGTAGTGGTGCGCACCTGTAATGCCAGCTACTCAGGAGGCCGAGGCAGGAGAATTGCTTGAACCTGGGAGGCAGAGGTTGCAGTTAGCTGAAATCGTGCCACTACACTCCAGTCTGGGTGAGACAGTGAGACCCTGTCTCAAAAAACAAAACAAAACAAACAACA\tC\t.\tPASS\tAC=424;AF=0.0846645;AFR_AF=0.1346;AMR_AF=0.0461;AN=5008;CS=DEL_pindel;EAS_AF=0.0536;END=10909099;EUR_AF=0.0447;MEINFO=AluSz,18,282,+;NS=2504;SAS_AF=0.1176;SITEPOST=0.9992;SVTYPE=DEL_ALU\tGT\t1|0\n9\t11329329\tALU_umary_ALU_7283\tT\t<INS:ME:ALU>\t.\t.\tAC=660;AF=0.131789;AFR_AF=0.0023;AMR_AF=0.1455;AN=5008;CS=ALU_umary;EAS_AF=0.3413;EUR_AF=0.0586;MEINFO=AluUndef,4,280,-;NS=2504;SAS_AF=0.1564;SITEPOST=1;SVLEN=276;SVTYPE=ALU;TSD=CAGATATTAATTTCTT\tGT\t0|1\n9\t14877445\tALU_umary_ALU_7297\tT\t<INS:ME:ALU>\t.\t.\tAC=552;AF=0.110224;AFR_AF=0.1619;AMR_AF=0.1383;AN=5008;CS=ALU_umary;EAS_AF=0.002;EUR_AF=0.163;MEINFO=AluYb8,1,279,-;NS=2504;SAS_AF=0.0777;SITEPOST=1;SVLEN=278;SVTYPE=ALU;TSD=TGTTGTTTCTTT\tGT\t0|1\n9\t15394880\tDEL_pindel_27973\tCAAAAAAATACATATATGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGCGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCCGGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAA\tC\t.\tPASS\tAC=3062;AF=0.611422;AFR_AF=0.5076;AMR_AF=0.7046;AN=5008;CS=DEL_pindel;EAS_AF=0.6468;END=15395196;EUR_AF=0.659;MEINFO=AluYb6_2,1,281,+;NS=2504;SAS_AF=0.6002;SITEPOST=0.9612;SVTYPE=DEL_ALU\tGT\t0|1\n9\t15602580\tDEL_pindel_27982\tATTGGTGTTACCCAAAAAGTTACCTCATTTTAAGATAGTGTTTCTCATTTCTTTTTTTTTTTTTTCTTTTTTTTTTTTTTTTTTTTT\tA\t.\tPASS\tAC=2641;AF=0.527356;AFR_AF=0.4183;AMR_AF=0.5879;AN=5008;CS=DEL_pindel;EAS_AF=0.7093;END=15602666;EUR_AF=0.4533;NS=2504;SAS_AF=0.5204;SITEPOST=0.999;SVTYPE=DEL\tGT\t0|1\n9\t15815277\tUW_VH_25180\tG\t<CN0>\t100\tPASS\tAC=1897;AF=0.378794;AFR_AF=0.4319;AMR_AF=0.3228;AN=5008;CIEND=0,268;CIPOS=-326,0;CS=DEL_union;EAS_AF=0.244;END=15821947;EUR_AF=0.4374;MC=SI_BD_9623,UW_VH_1505,BI_GS_DEL1_B5_P1561_901,YL_CN_FIN_2011,UW_VH_17676,UW_VH_3301;NS=2504;SAS_AF=0.4254;SVTYPE=DEL\tGT\t1|0\n9\t17874425\tALU_umary_ALU_7320\tA\t<INS:ME:ALU>\t.\t.\tAC=694;AF=0.138578;AFR_AF=0.1188;AMR_AF=0.1542;AN=5008;CS=ALU_umary;EAS_AF=0.0248;EUR_AF=0.2256;MEINFO=AluUndef,1,281,-;NS=2504;SAS_AF=0.182;SITEPOST=1;SVLEN=280;SVTYPE=ALU;TSD=null\tGT\t1|0\n9\t18751826\tDEL_pindel_28042\tTAGAAATACAACTTGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCGGGAGATCGAGGCCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAA\tT\t.\tPASS\tAC=3155;AF=0.629992;AFR_AF=0.6316;AMR_AF=0.6037;AN=5008;CS=DEL_pindel;EAS_AF=0.5982;END=18752116;EUR_AF=0.662;MEINFO=AluY,34,281,+;NS=2504;SAS_AF=0.6462;SITEPOST=0.985;SVTYPE=DEL_ALU\tGT\t1|1\n9\t21038453\tALU_umary_ALU_7331\tA\t<INS:ME:ALU>\t.\t.\tAC=1294;AF=0.258387;AFR_AF=0.1974;AMR_AF=0.1686;AN=5008;CS=ALU_umary;EAS_AF=0.3472;EUR_AF=0.3221;MEINFO=AluUndef,2,281,-;NS=2504;SAS_AF=0.2474;SITEPOST=1;SVLEN=279;SVTYPE=ALU;TSD=null\tGT\t0|1\n9\t21109534\tALU_umary_ALU_7332\tT\t<INS:ME:ALU>\t.\t.\tAC=1678;AF=0.335064;AFR_AF=0.2678;AMR_AF=0.3818;AN=5008;CS=ALU_umary;EAS_AF=0.4226;EUR_AF=0.2813;MEINFO=AluUndef,9,270,-;NS=2504;SAS_AF=0.3579;SITEPOST=1;SVLEN=261;SVTYPE=ALU;TSD=GAAAAATATAT\tGT\t1|0\n9\t21261949\tALU_umary_ALU_7336\tT\t<INS:ME:ALU>\t.\t.\tAC=470;AF=0.0938498;AFR_AF=0.1082;AMR_AF=0.0965;AN=5008;CS=ALU_umary;EAS_AF=0.002;EUR_AF=0.1471;MEINFO=AluUndef,1,257,+;NS=2504;SAS_AF=0.1125;SITEPOST=1;SVLEN=256;SVTYPE=ALU;TSD=AAAAAATGGT\tGT\t0|1\n9\t22288724\tALU_umary_ALU_7339\tT\t<INS:ME:ALU>\t.\t.\tAC=2659;AF=0.53095;AFR_AF=0.2421;AMR_AF=0.6369;AN=5008;CS=ALU_umary;EAS_AF=0.6538;EUR_AF=0.667;MEINFO=AluUndef,2,281,-;NS=2504;SAS_AF=0.5798;SITEPOST=1;SVLEN=279;SVTYPE=ALU;TSD=GCCTGTGTTTCCTTTCT\tGT\t1|0\n9\t22999487\tDEL_pindel_28142\tTAAAAAATTTGAATGCCGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTGGTAGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCCAGGGGGCGGAGCCTGCAGTGAGCCGAGATTGCGCCACTGCACTCCAGCCTGGGCGACAGCGAGACTCCGTCTCAAAAAAAAAAAAAACAAAAAAAAAAAAAAAAAAAAA\tT\t.\tPASS\tAC=3677;AF=0.734225;AFR_AF=0.7322;AMR_AF=0.745;AN=5008;CS=DEL_pindel;EAS_AF=0.7321;END=22999819;EUR_AF=0.7485;MEINFO=AluYc1,1,281,+;NS=2504;SAS_AF=0.7168;SITEPOST=0.9626;SVTYPE=DEL_ALU\tGT\t1|1\n9\t23362812\tUW_VH_14741\tA\t<CN0>\t100\tPASS\tAC=1676;AF=0.334665;AFR_AF=0.09;AMR_AF=0.3559;AN=5008;CIEND=0,391;CIPOS=-402,0;CS=DEL_union;EAS_AF=0.4692;END=23377678;EUR_AF=0.4294;MC=YL_CN_KHV_2175,EM_DL_DEL99518,SI_BD_9678,BI_GS_DEL1_B2_P1569_267;NS=2504;SAS_AF=0.4141;SVTYPE=DEL\tGT\t0|1\n9\t23370987\tBI_GS_DEL1_B3_P1569_26\tA\t<CN0>\t100\tPASS\tAC=1698;AF=0.339058;AFR_AF=0.1082;AMR_AF=0.3545;AN=5008;CIEND=0,1;CIPOS=0,1;CS=DEL_union;EAS_AF=0.4683;END=23372431;EUR_AF=0.4294;MC=UW_VH_12831,SI_BD_9679;NS=2504;SAS_AF=0.4141;SVTYPE=DEL\tGT\t0|1\n9\t28584919\tDEL_pindel_28277\tTGACTGCAAGAGATTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGCGATCTCGGCTCAC\tT\t.\tPASS\tAC=3495;AF=0.697883;AFR_AF=0.5877;AMR_AF=0.7464;AN=5008;CS=DEL_pindel;EAS_AF=0.754;END=28585011;EUR_AF=0.7376;MEINFO=AluSz,225,282,-;NS=2504;SAS_AF=0.7137;SITEPOST=0.9675;SVTYPE=DEL_ALU\tGT\t1|1\n9\t28846309\tSI_BD_9715\tT\t<CN0>\t100\tPASS\tAC=556;AF=0.111022;AFR_AF=0.1573;AMR_AF=0.0922;AN=5008;CIEND=-50,96;CIPOS=-96,82;CS=DEL_union;EAS_AF=0.1022;END=28847978;EUR_AF=0.0964;MC=YL_CN_GIH_1684,BI_GS_DEL1_B1_P1574_686,UW_VH_9783;NS=2504;SAS_AF=0.0859;SVTYPE=DEL\tGT\t0|1\n9\t28960619\tALU_umary_ALU_7371\tG\t<INS:ME:ALU>\t.\t.\tAC=2009;AF=0.401158;AFR_AF=0.3139;AMR_AF=0.4352;AN=5008;CS=ALU_umary;EAS_AF=0.3879;EUR_AF=0.4751;MEINFO=AluYc1,11,281,+;NS=2504;SAS_AF=0.4325;SITEPOST=1;SVLEN=270;SVTYPE=ALU;TSD=AAGAAATATGTATAATTG\tGT\t0|1\n9\t29624691\tDEL_pindel_28305\tTAAGCCTGGGTAGATTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC\tT\t.\tPASS\tAC=3470;AF=0.692891;AFR_AF=0.6293;AMR_AF=0.6758;AN=5008;CS=DEL_pindel;EAS_AF=0.7589;END=29625012;EUR_AF=0.7286;MEINFO=AluYa5,1,281,-;NS=2504;SAS_AF=0.6861;SITEPOST=0.96275;SVTYPE=DEL_ALU\tGT\t1|1\n9\t30491283\tDEL_pindel_28328\tACAAAAATAATTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACCACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCCGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGC\tA\t.\tPASS\tAC=2870;AF=0.573083;AFR_AF=0.2806;AMR_AF=0.6888;AN=5008;CS=DEL_pindel;EAS_AF=0.6538;END=30491594;EUR_AF=0.7127;MEINFO=AluYa5b1,2,281,-;NS=2504;SAS_AF=0.6595;SITEPOST=0.9702;SVTYPE=DEL_ALU\tGT\t1|1\n9\t30674468\tL1_umary_LINE1_1818\tT\t<INS:ME:LINE1>\t.\t.\tAC=931;AF=0.185903;AFR_AF=0.4115;AMR_AF=0.0922;AN=5008;CS=L1_umary;EAS_AF=0.1171;EUR_AF=0.1193;MEINFO=LINE1,5257,6015,-;NS=2504;SAS_AF=0.0869;SITEPOST=1;SVLEN=758;SVTYPE=LINE1;TSD=CAACCAAGACAGTAAATTTTTTTTTT\tGT\t1|0\n9\t31291353\tBI_GS_DEL1_B1_P1577_233\tA\t<CN0>\t100\tPASS\tAC=2346;AF=0.46845;AFR_AF=0.3018;AMR_AF=0.4481;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.6161;END=31292673;EUR_AF=0.3539;MC=EM_DL_DEL101119722,SI_BD_9729;NS=2504;SAS_AF=0.6738;SVTYPE=DEL\tGT\t1|1\n9\t32092742\tL1_umary_LINE1_1821\tT\t<INS:ME:LINE1>\t.\t.\tAC=1141;AF=0.227835;AFR_AF=0.1793;AMR_AF=0.1643;AN=5008;CS=L1_umary;EAS_AF=0.2331;EUR_AF=0.2177;MEINFO=LINE1,4728,6016,-;NS=2504;SAS_AF=0.3436;SITEPOST=1;SVLEN=1288;SVTYPE=LINE1;TSD=TT\tGT\t1|0\n9\t33213068\tEM_DL_DEL101120420\tG\t<CN0>\t100\tPASS\tAC=2372;AF=0.473642;AFR_AF=0.236;AMR_AF=0.4928;AN=5008;CIEND=-150,150;CIPOS=-150,150;CS=DEL_union;EAS_AF=0.6786;END=33213929;EUR_AF=0.5318;NS=2504;SAS_AF=0.5102;SVTYPE=DEL\tGT\t1|0\n9\t33213125\tBI_GS_DEL1_B1_P1579_179\tA\t<CN0>\t100\tPASS\tAC=2369;AF=0.473043;AFR_AF=0.2345;AMR_AF=0.4928;AN=5008;CIEND=-22,22;CIPOS=-22,22;CS=DEL_union;EAS_AF=0.6786;END=33213403;EUR_AF=0.5308;NS=2504;SAS_AF=0.5102;SVTYPE=DEL\tGT\t1|0\n9\t36362880\tBI_GS_DEL1_B1_P1582_297\tC\t<CN0>\t100\tPASS\tAC=2373;AF=0.473842;AFR_AF=0.3222;AMR_AF=0.4467;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.4802;END=36364079;EUR_AF=0.6193;MC=EM_DL_DEL101121817,UW_VH_4968,SI_BD_9761;NS=2504;SAS_AF=0.5419;SVTYPE=DEL\tGT\t1|1\n9\t36474157\tBI_GS_DEL1_B3_P1582_26\tA\t<CN0>\t100\tPASS\tAC=802;AF=0.160144;AFR_AF=0.118;AMR_AF=0.1052;AN=5008;CIEND=-42,43;CIPOS=-42,43;CS=DEL_union;EAS_AF=0.3413;END=36474999;EUR_AF=0.0676;MC=UW_VH_1826,UW_VH_21184;NS=2504;SAS_AF=0.1646;SVTYPE=DEL\tGT\t0|1\n9\t38555824\tUW_VH_3064\tA\t<CN0>\t100\tPASS\tAC=35;AF=0.00698882;AFR_AF=0.0008;AMR_AF=0.0159;AN=5008;CIEND=0,245;CIPOS=-309,0;CS=DEL_union;EAS_AF=0;END=38565194;EUR_AF=0.0219;MC=SI_BD_9768,YL_CN_PUR_2597;NS=2504;SAS_AF=0.001;SVTYPE=DEL\tGT\t1|0\n9\t40609334\tALU_umary_ALU_7431\tG\t<INS:ME:ALU>\t.\t.\tAC=1143;AF=0.228235;AFR_AF=0.1437;AMR_AF=0.2608;AN=5008;CS=ALU_umary;EAS_AF=0.251;EUR_AF=0.2286;MEINFO=AluYa4_3,2,281,+;NS=2504;SAS_AF=0.2955;SITEPOST=1;SVLEN=279;SVTYPE=ALU;TSD=AGAAAATGCCAGGATG\tGT\t0|1\n9\t43392405\tDUP_gs_CNV_9_43392405_43404180\tT\t<CN0>,<CN2>,<CN3>\t.\tPASS\tAC=905,1807,19;AF=0.180711,0.360823,0.00379393;AFR_AF=0.2352,0.1793,0.0038;AMR_AF=0.1441,0.4395,0.0014;AN=5008;CS=DUP_gs;EAS_AF=0.1855,0.379,0.006;END=43404180;EUR_AF=0.1461,0.4771,0.003;NS=2504;SAS_AF=0.1636,0.4121,0.0041;SITEPOST=0.9952;SVTYPE=CNV\tGT\t2|1\n9\t43450178\tDUP_gs_CNV_9_43450178_43463455\tA\t<CN0>,<CN2>,<CN3>\t.\tPASS\tAC=1228,128,9;AF=0.245208,0.0255591,0.00179712;AFR_AF=0.2814,0.0136,0;AMR_AF=0.2219,0.0202,0.0014;AN=5008;CS=DUP_gs;EAS_AF=0.251,0.0179,0.002;END=43463455;EUR_AF=0.2177,0.0586,0.003;NS=2504;SAS_AF=0.2352,0.0194,0.0031;SITEPOST=1;SVTYPE=CNV\tGT\t0|1\n9\t43495449\tDUP_gs_CNV_9_43495449_43520900\tG\t<CN0>,<CN2>,<CN3>\t.\tPASS\tAC=1159,375,13;AF=0.23143,0.0748802,0.00259585;AFR_AF=0.2829,0.0265,0.0008;AMR_AF=0.2061,0.0749,0;AN=5008;CS=DUP_gs;EAS_AF=0.248,0.0337,0.004;END=43520900;EUR_AF=0.1938,0.1233,0.004;NS=2504;SAS_AF=0.2014,0.1329,0.0041;SITEPOST=1;SVTYPE=CNV\tGT\t0|1\n9\t43580844\tDUP_gs_CNV_9_43580844_43606160\tA\t<CN0>,<CN2>\t.\tPASS\tAC=1222,222;AF=0.24401,0.0443291;AFR_AF=0.2905,0.0507;AMR_AF=0.2075,0.0259;AN=5008;CS=DUP_gs;EAS_AF=0.2619,0.0317;END=43606160;EUR_AF=0.2068,0.0726;NS=2504;SAS_AF=0.227,0.0327;SITEPOST=1;SVTYPE=CNV\tGT\t0|1\n9\t43612172\tDUP_gs_CNV_9_43612172_43623150\tG\t<CN0>,<CN2>\t.\tPASS\tAC=2966,35;AF=0.592252,0.00698882;AFR_AF=0.556,0.0144;AMR_AF=0.5706,0.0043;AN=5008;CS=DUP_gs;EAS_AF=0.7579,0.005;END=43623150;EUR_AF=0.5636,0.005;NS=2504;SAS_AF=0.5153,0.0031;SITEPOST=1;SVTYPE=CNV\tGT\t1|1\n9\t43652217\tDUP_gs_CNV_9_43652217_43676146\tT\t<CN0>,<CN2>,<CN3>\t.\tPASS\tAC=1257,135,14;AF=0.250998,0.0269569,0.00279553;AFR_AF=0.3238,0.0182,0.0008;AMR_AF=0.2061,0.0187,0.0043;AN=5008;CS=DUP_gs;EAS_AF=0.2758,0.0288,0.002;END=43676146;EUR_AF=0.1859,0.0447,0.004;NS=2504;SAS_AF=0.226,0.0245,0.0041;SITEPOST=1;SVTYPE=CNV\tGT\t0|1\n9\t44235869\tDUP_gs_CNV_9_44235869_44252311\tA\t<CN0>,<CN2>\t.\tPASS\tAC=1819,1536;AF=0.363219,0.306709;AFR_AF=0.2557,0.4236;AMR_AF=0.4755,0.1787;AN=5008;CS=DUP_gs;EAS_AF=0.2679,0.4206;END=44252311;EUR_AF=0.4642,0.2127;NS=2504;SAS_AF=0.4233,0.2188;SITEPOST=0.9999;SVTYPE=CNV\tGT\t2|1\n9\t44255190\tDUP_gs_CNV_9_44255190_44276471\tA\t<CN0>,<CN2>\t.\tPASS\tAC=2803,10;AF=0.559704,0.00199681;AFR_AF=0.329,0.0053;AMR_AF=0.7954,0.0014;AN=5008;CS=DUP_gs;EAS_AF=0.3581,0.001;END=44276471;EUR_AF=0.7465,0;NS=2504;SAS_AF=0.7198,0.001;SITEPOST=1;SVTYPE=CNV\tGT\t0|1\n9\t45700960\tDUP_gs_CNV_9_45700960_45715411\tG\t<CN0>,<CN2>,<CN3>\t.\tPASS\tAC=668,1247,83;AF=0.133387,0.249002,0.0165735;AFR_AF=0.1664,0.2587,0.0325;AMR_AF=0.1801,0.1816,0.0086;AN=5008;CS=DUP_gs;EAS_AF=0.1379,0.2312,0.004;END=45715411;EUR_AF=0.0616,0.3062,0.0239;NS=2504;SAS_AF=0.1247,0.2434,0.0061;SITEPOST=0.98665;SVTYPE=CNV\tGT\t2|0\n9\t66478618\tALU_umary_ALU_7440\tT\t<INS:ME:ALU>\t.\t.\tAC=584;AF=0.116613;AFR_AF=0.1339;AMR_AF=0.1124;AN=5008;CS=ALU_umary;EAS_AF=0.0575;EUR_AF=0.1312;MEINFO=AluUndef,1,203,-;NS=2504;SAS_AF=0.1421;SITEPOST=1;SVLEN=202;SVTYPE=ALU;TSD=null\tGT\t0|1\n9\t66497883\tDUP_gs_CNV_9_66497883_66537264\tA\t<CN0>,<CN2>,<CN3>,<CN4>\t.\tPASS\tAC=4,353,3923,437;AF=0.00079872,0.0704872,0.783347,0.0872604;AFR_AF=0.0023,0.0711,0.7504,0.0719;AMR_AF=0,0.0735,0.8545,0.0245;AN=5008;CS=DUP_gs;EAS_AF=0.001,0.1012,0.5665,0.252;END=66537264;EUR_AF=0,0.0288,0.9364,0.0209;NS=2504;SAS_AF=0,0.0787,0.8436,0.0511;SITEPOST=0.9933;SVTYPE=CNV\tGT\t3|3\n9\t68354131\tDUP_gs_CNV_9_68354131_68388436\tT\t<CN2>,<CN3>\t.\tPASS\tAC=4987,2;AF=0.995807,0.00039936;AFR_AF=0.9939,0;AMR_AF=0.9971,0.0014;AN=5008;CS=DUP_gs;EAS_AF=0.9921,0;END=68388436;EUR_AF=0.998,0;NS=2504;SAS_AF=0.999,0.001;SITEPOST=0.9999;SVTYPE=CNV\tGT\t1|1\n9\t69794966\tDUP_gs_CNV_9_69794966_69839048\tA\t<CN2>,<CN3>\t.\tPASS\tAC=4533,203;AF=0.905152,0.0405351;AFR_AF=0.9304,0.0174;AMR_AF=0.9251,0.0144;AN=5008;CS=DUP_gs;EAS_AF=0.8075,0.1389;END=69839048;EUR_AF=0.9324,0.0129;NS=2504;SAS_AF=0.9294,0.0174;SITEPOST=0.9999;SVTYPE=CNV\tGT\t1|1\n9\t71665323\tDEL_pindel_28510\tTAAGAGTGGAGCTGATGATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTGGTAGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCTTGCAGTGAGCCGAGATCGCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAA\tT\t.\tPASS\tAC=3745;AF=0.747804;AFR_AF=0.7262;AMR_AF=0.7536;AN=5008;CS=DEL_pindel;EAS_AF=0.7768;END=71665557;EUR_AF=0.7525;MEINFO=AluYc2,81,281,+;NS=2504;SAS_AF=0.7382;SITEPOST=0.95605;SVTYPE=DEL_ALU\tGT\t0|1\n9\t71738119\tBI_GS_DEL1_B1_P1617_688\tG\t<CN0>\t100\tPASS\tAC=3214;AF=0.641773;AFR_AF=0.5469;AMR_AF=0.8112;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.6776;END=71743359;EUR_AF=0.6909;MC=UW_VH_5879,EM_DL_DEL100470,UW_VH_2181,UW_VH_2182,YL_CN_ACB_2571,UW_VH_17270,UW_VH_9217,SI_BD_9793,UW_VH_25169;NS=2504;SAS_AF=0.5624;SVTYPE=DEL\tGT\t1|0\n9\t71777926\tDEL_pindel_28515\tAAGTATCTTTATTTTATTTTATTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCCTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCCTC\tA\t.\tPASS\tAC=2073;AF=0.413938;AFR_AF=0.4183;AMR_AF=0.4813;AN=5008;CS=DEL_pindel;EAS_AF=0.5188;END=71778244;EUR_AF=0.3559;MEINFO=AluYa5,1,281,-;NS=2504;SAS_AF=0.3119;SITEPOST=0.99715;SVTYPE=DEL_ALU\tGT\t1|0\n9\t71804520\tBI_GS_DEL1_B1_P1617_739\tC\t<CN0>\t100\tPASS\tAC=2175;AF=0.434305;AFR_AF=0.4486;AMR_AF=0.3084;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.3075;END=71804997;EUR_AF=0.5199;MC=DEL_pindel_28516;NS=2504;SAS_AF=0.547;SVTYPE=DEL\tGT\t0|1\n9\t71895338\tSI_BD_9796\tG\t<CN0>\t100\tPASS\tAC=4308;AF=0.860224;AFR_AF=0.9871;AMR_AF=0.8833;AN=5008;CIEND=-50,292;CIPOS=-292,51;CS=DEL_union;EAS_AF=0.6389;END=71896537;EUR_AF=0.8111;MC=UW_VH_25422,EM_DL_DEL101126186,UW_VH_781;NS=2504;SAS_AF=0.9509;SVTYPE=DEL\tGT\t1|1\n9\t73463597\tDEL_pindel_28537\tCAAAAGAAATTACCTGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTGGTAGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCTTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCTAGATCGCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAA\tC\t.\tPASS\tAC=2220;AF=0.443291;AFR_AF=0.4909;AMR_AF=0.4885;AN=5008;CS=DEL_pindel;EAS_AF=0.2659;END=73463913;EUR_AF=0.4841;MEINFO=AluYc1,1,281,+;NS=2504;SAS_AF=0.4877;SITEPOST=0.9983;SVTYPE=DEL_ALU\tGT\t1|1\n9\t74544792\tALU_umary_ALU_7458\tT\t<INS:ME:ALU>\t.\t.\tAC=1615;AF=0.322484;AFR_AF=0.2572;AMR_AF=0.2378;AN=5008;CS=ALU_umary;EAS_AF=0.3968;EUR_AF=0.3231;MEINFO=AluUndef,3,276,+;NS=2504;SAS_AF=0.3937;SITEPOST=1;SVLEN=273;SVTYPE=ALU;TSD=AAACTTAAAGATATCT\tGT\t1|1\n9\t75669517\tDEL_pindel_28573\tTAAGACTTGATATTGGAGATCGAGACCATGCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTATTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA\tT\t.\tPASS\tAC=4103;AF=0.819289;AFR_AF=0.8132;AMR_AF=0.8055;AN=5008;CS=DEL_pindel;EAS_AF=0.8373;END=75669796;EUR_AF=0.8072;MEINFO=AluY,72,281,+;NS=2504;SAS_AF=0.8313;SITEPOST=0.96985;SVTYPE=DEL_ALU\tGT\t0|1\n9\t77524150\tDEL_pindel_28601\tCAAAAAATTAGCCGGGCGCGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCCGGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAA\tC\t.\tPASS\tAC=2506;AF=0.500399;AFR_AF=0.441;AMR_AF=0.4683;AN=5008;CS=DEL_pindel;EAS_AF=0.5804;END=77524337;EUR_AF=0.492;NS=2504;SAS_AF=0.5297;SITEPOST=0.9773;SVTYPE=DEL\tGT\t0|1\n9\t78736726\tDEL_pindel_28630\tATTGGTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCAGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC\tA\t.\tPASS\tAC=2029;AF=0.405152;AFR_AF=0.3313;AMR_AF=0.4971;AN=5008;CS=DEL_pindel;EAS_AF=0.3919;END=78737038;EUR_AF=0.4632;MEINFO=AluYa5,1,281,-;NS=2504;SAS_AF=0.3937;SITEPOST=0.999;SVTYPE=DEL_ALU\tGT\t1|1\n9\t78895792\tALU_umary_ALU_7492\tA\t<INS:ME:ALU>\t.\t.\tAC=424;AF=0.0846645;AFR_AF=0.1687;AMR_AF=0.0562;AN=5008;CS=ALU_umary;EAS_AF=0.0526;EUR_AF=0.0577;MEINFO=AluUndef,1,279,-;NS=2504;SAS_AF=0.0521;SITEPOST=1;SVLEN=278;SVTYPE=ALU;TSD=AAAAAAGAGA\tGT\t1|0\n9\t83630437\tDEL_pindel_28717\tTAAGAAATTCAATTAAGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGCGGTGGCGGGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCCGGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAA\tT\t.\tPASS\tAC=3175;AF=0.633986;AFR_AF=0.6793;AMR_AF=0.6311;AN=5008;CS=DEL_pindel;EAS_AF=0.5774;END=83630750;EUR_AF=0.6392;MEINFO=AluYb6_2,1,281,+;NS=2504;SAS_AF=0.6278;SITEPOST=0.972;SVTYPE=DEL_ALU\tGT\t1|0\n9\t85033845\tDEL_pindel_28734\tTAAAGATTTGTTCCAGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGCGGTGGCGGGCGCCTGTAGTCCTAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCCGACCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA\tT\t.\tPASS\tAC=1700;AF=0.339457;AFR_AF=0.385;AMR_AF=0.3199;AN=5008;CS=DEL_pindel;EAS_AF=0.4325;END=85034187;EUR_AF=0.2684;MEINFO=AluYb6_2,1,281,+;NS=2504;SAS_AF=0.2689;SITEPOST=0.9993;SVTYPE=DEL_ALU\tGT\t0|1\n9\t87775183\tSI_BD_9881\tA\t<CN0>\t100\tPASS\tAC=656;AF=0.13099;AFR_AF=0.2035;AMR_AF=0.1455;AN=5008;CIEND=-50,258;CIPOS=-258,50;CS=DEL_union;EAS_AF=0.0198;END=87776183;EUR_AF=0.2296;MC=UW_VH_790,BI_GS_DEL1_B2_P1633_628;NS=2504;SAS_AF=0.0358;SVTYPE=DEL\tGT\t0|1\n9\t87901405\tDEL_pindel_28788\tTTACATGTCTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGCGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCTACCACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC\tT\t.\tPASS\tAC=3654;AF=0.729633;AFR_AF=0.798;AMR_AF=0.611;AN=5008;CS=DEL_pindel;EAS_AF=0.8075;END=87901712;EUR_AF=0.6113;MEINFO=AluYc1,1,281,-;NS=2504;SAS_AF=0.7628;SITEPOST=0.99105;SVTYPE=DEL_ALU\tGT\t0|1\n9\t89154576\tSI_BD_9886\tG\t<CN0>\t100\tPASS\tAC=4098;AF=0.818291;AFR_AF=0.6914;AMR_AF=0.866;AN=5008;CIEND=-50,218;CIPOS=-218,50;CS=DEL_union;EAS_AF=0.9266;END=89155912;EUR_AF=0.7485;MC=EM_DL_DEL101132841,YL_CN_ESN_2377,YL_CN_MSL_2137,YL_CN_CHB_2280,YL_CN_ACB_2588,YL_CN_TSI_2191,YL_CN_PEL_2023,YL_CN_FIN_2137,YL_CN_BEB_1915,UW_VH_5061,YL_CN_JPT_2433,YL_CN_MXL_1895,YL_CN_KHV_2330,YL_CN_ASW_2302;NS=2504;SAS_AF=0.9162;SVTYPE=DEL\tGT\t1|0\n9\t89799093\tDEL_pindel_28824\tTAATTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTGTCGCCCAGGCTGGAGTGCAGTGGCGCAATCTCGGCTCACTGCAGGCTCCGCCCCCTGGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCTCGCCCGGCTAATTTTTTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC\tT\t.\tPASS\tAC=3985;AF=0.795727;AFR_AF=0.7511;AMR_AF=0.7911;AN=5008;CS=DEL_pindel;EAS_AF=0.8323;END=89799407;EUR_AF=0.7833;MEINFO=AluYe,1,281,-;NS=2504;SAS_AF=0.8344;SITEPOST=0.98375;SVTYPE=DEL_ALU\tGT\t0|1\n9\t91501994\tDEL_pindel_28849\tGTGGCTGCTGTGGGGGGTGGGGGTGAGATTCCCAGGTCACTGCAGTTGTGTACCTAGGAGGATTA\tG\t.\tPASS\tAC=3559;AF=0.710663;AFR_AF=0.6589;AMR_AF=0.7046;AN=5008;CS=DEL_pindel;EAS_AF=0.8274;END=91502058;EUR_AF=0.665;NS=2504;SAS_AF=0.7117;SITEPOST=0.99415;SVTYPE=DEL\tGT\t1|1\n9\t92176048\tBI_GS_DEL1_B4_P1638_53\tG\t<CN0>\t100\tPASS\tAC=441;AF=0.0880591;AFR_AF=0.0386;AMR_AF=0.1556;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.1627;END=92177979;EUR_AF=0.0626;MC=EM_DL_DEL101134111,YL_CN_JPT_2435,UW_VH_793,UW_VH_4287;NS=2504;SAS_AF=0.0562;SVTYPE=DEL\tGT\t1|0\n9\t95884696\tDEL_pindel_28945\tGGGAAGGGGGGAGAGGAGAGGCTCTGAGCCTGGAAGGAGGGAGAGGAGAGGCTCTGAGCCT\tG\t.\tPASS\tAC=2000;AF=0.399361;AFR_AF=0.3911;AMR_AF=0.4207;AN=5008;CS=DEL_pindel;EAS_AF=0.38;END=95884756;EUR_AF=0.4135;NS=2504;SAS_AF=0.4008;SITEPOST=0.9989;SVTYPE=DEL\tGT\t0|1\n9\t96371386\tALU_umary_ALU_7564\tT\t<INS:ME:ALU>\t.\t.\tAC=804;AF=0.160543;AFR_AF=0.0817;AMR_AF=0.1873;AN=5008;CS=ALU_umary;EAS_AF=0.1875;EUR_AF=0.2724;MEINFO=AluUndef,2,281,-;NS=2504;SAS_AF=0.1053;SITEPOST=1;SVLEN=279;SVTYPE=ALU;TSD=TTAGTGGTTGTTTT\tGT\t0|1\n9\t96730345\tDEL_pindel_28964\tTCCAGATCACTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGCGATCTCGGCTCACTGCAAGCTCCGCCTCCCAGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCTACCACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGA\tT\t.\tPASS\tAC=2891;AF=0.577276;AFR_AF=0.7088;AMR_AF=0.6643;AN=5008;CS=DEL_pindel;EAS_AF=0.6042;END=96730597;EUR_AF=0.493;MEINFO=AluYc1,61,281,-;NS=2504;SAS_AF=0.3967;SITEPOST=0.9975;SVTYPE=DEL_ALU\tGT\t0|1\n9\t97292906\tDEL_pindel_28970\tACCAAACACCATGTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGTCGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGG\tA\t.\tPASS\tAC=3450;AF=0.688898;AFR_AF=0.6982;AMR_AF=0.7305;AN=5008;CS=DEL_pindel;EAS_AF=0.6875;END=97293231;EUR_AF=0.6918;MEINFO=AluYb6_2,3,281,-;NS=2504;SAS_AF=0.6452;SITEPOST=0.929;SVTYPE=DEL_ALU\tGT\t0|1\n9\t97314256\tALU_umary_ALU_7569\tC\t<INS:ME:ALU>\t.\t.\tAC=1081;AF=0.215855;AFR_AF=0.0091;AMR_AF=0.1484;AN=5008;CS=ALU_umary;EAS_AF=0.3889;EUR_AF=0.2724;MEINFO=AluYa5,1,281,+;NS=2504;SAS_AF=0.3067;SITEPOST=1;SVLEN=280;SVTYPE=ALU;TSD=AAAAGAGAGCTCAAC\tGT\t1|1\n9\t99062582\tDEL_pindel_29003\tCCCAAACAATTTCTCACACGGTAATTTTTTTAATTTCCATTGCTAAGTTTTTAAGGTTGCCAGGTTTAGCAAATAAGGATACAGAATGCCCACTTAAATTTGAAATTAAGGTAAATTATGAATTGTTTAATGCATGTCTCATGCCATATGTGAGTTATACTAAAAAAGTATTCCTTTTTTTCTGAAATTTAAATTTAACTGGGTATCCTGTATTTTATCTGGCAGCCCTATAAGCATATTAGAATCTTTCCTATTTTGCCTAGATAATATCTCTAAAGTCACTTAATCATTTTTGTCATTGGATTCTTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT\tC\t.\tPASS\tAC=1168;AF=0.233227;AFR_AF=0.1452;AMR_AF=0.3473;AN=5008;CS=DEL_pindel;EAS_AF=0.3145;END=99062920;EUR_AF=0.1769;NS=2504;SAS_AF=0.2454;SITEPOST=0.9999;SVTYPE=DEL\tGT\t0|1\n9\t100761058\tDEL_pindel_29044\tAGAAAGTGGTGGCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC\tA\t.\tPASS\tAC=2272;AF=0.453674;AFR_AF=0.5787;AMR_AF=0.3876;AN=5008;CS=DEL_pindel;EAS_AF=0.2837;END=100761388;EUR_AF=0.4573;MEINFO=AluYa3_4,1,281,-;NS=2504;SAS_AF=0.5031;SITEPOST=0.9965;SVTYPE=DEL_ALU\tGT\t1|0\n9\t101309042\tBI_GS_DEL1_B1_P1647_344\tC\t<CN0>\t100\tPASS\tAC=2069;AF=0.413139;AFR_AF=0.1921;AMR_AF=0.5043;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.6369;END=101311668;EUR_AF=0.4751;MC=UW_VH_19740,YL_CN_BEB_1927,YL_CN_MSL_2144,UW_VH_797,EM_DL_DEL102086;NS=2504;SAS_AF=0.3528;SVTYPE=DEL\tGT\t1|0\n9\t101347967\tBI_GS_DEL1_B5_P1647_467\tA\t<CN0>\t100\tPASS\tAC=2647;AF=0.528554;AFR_AF=0.6195;AMR_AF=0.4193;AN=5008;CIEND=-1,1;CIPOS=-1,1;CS=DEL_union;EAS_AF=0.2738;END=101348322;EUR_AF=0.675;MC=UW_VH_798;NS=2504;SAS_AF=0.5951;SVTYPE=DEL\tGT\t0|1\n9\t102849310\tALU_umary_ALU_7594\tG\t<INS:ME:ALU>\t.\t.\tAC=602;AF=0.120208;AFR_AF=0.3434;AMR_AF=0.0605;AN=5008;CS=ALU_umary;EAS_AF=0.002;EUR_AF=0.0825;MEINFO=AluYa5,2,281,-;NS=2504;SAS_AF=0.0215;SITEPOST=1;SVLEN=279;SVTYPE=ALU;TSD=AAATAAAAAAAAAAACTTTG\tGT\t1|0\n9\t104219699\tBI_GS_DEL1_B3_P1650_12\tT\t<CN0>\t100\tPASS\tAC=3159;AF=0.630791;AFR_AF=0.6067;AMR_AF=0.5879;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.5585;END=104220378;EUR_AF=0.6879;MC=UW_VH_25143,SI_BD_9967,DEL_pindel_29097,UW_VH_799;NS=2504;SAS_AF=0.7096;SVTYPE=DEL\tGT\t0|1\n9\t104443961\tDEL_pindel_29101\tTGAATATATCCCTATTCTTTTTTTTTTTTTTTTTTTATTATACTCTAAGTTTTAGGGTACATGTGCACATTGTGCAGGTTAGTTACATATGTATACATGTGCCATGCTGGTGCGCTGCACCCACTAATGTGTCATCTAGCATTAGGTATATCTCCCAATGCTATCCCTCCCCCCTCCCCCGACCCCACCACAGTCCCCAGAGTGTGATATTCCCCTTCCTGTGTCCATGTGATCTCATTGTGCAATTCCCACCTATGAGTGAGAATATGCAGTGTTTGGTTTTTTGTTCTTGCGATAGTTTACTGAGAATGATGGTTTCCAATTTCATCCATGTCCCTACAAAGGATATGAACTCATCATTTTTTATGGCTGCATAGTATTCCATGGTGTATATGTGCCACATTTTCTTAATCCAGTCTATCATTGTTGGACATTTGGGTTGGTTCCAAGTCTTTGCTATTGTGAATAGTGCCGCAATAAACATACGTGTGCATGTGTCTTTATAGCAGCATGATTTATACTCATTTGGGTATATACCCAGTAATGGGATGGCTGGGTCAAGTGGTATTTCTAGTTCTAGATCCCTGAGGAATCGCCACACTGACTTCCACAATGGTTGAACTAGTTTACAGTCCCACCAACAGTGTAAAAGTGTTCCTATTTCTCCGCATCCTCTCCAGCACCTGTTGTTTCCTGACTTTTTAATGATTGCCATTCTAACTGGTGTGAGATGGTATCTCATAGTGGTTTTGATTTGCATTTCTCTG\tT\t.\tPASS\tAC=2857;AF=0.570487;AFR_AF=0.5915;AMR_AF=0.5793;AN=5008;CS=DEL_pindel;EAS_AF=0.4683;END=104444727;EUR_AF=0.6113;MEINFO=LINE1,5292,6019,-;NS=2504;SAS_AF=0.5992;SITEPOST=0.9819;SVTYPE=DEL_LINE1\tGT\t0|1\n9\t105162485\tDEL_pindel_29127\tTTCTTGTTTTTTTTTTTTTGTTTGTTTGTTTTTTTTATTCTTTTTTCTTTTTTTTTTTTTTTATTATTATTATACTCTAAGTTTTAGGGTACATGTGCACATTGTGCAGGTTAGTTACATATGTATACATGTGCCATGCTGGTGCGCTGCACCCACTAATGTGTCATCTAGCATTAGGTATATC\tT\t.\tPASS\tAC=2513;AF=0.501797;AFR_AF=0.5719;AMR_AF=0.5706;AN=5008;CS=DEL_pindel;EAS_AF=0.5109;END=105162668;EUR_AF=0.5129;NS=2504;SAS_AF=0.3374;SITEPOST=0.9998;SVTYPE=DEL\tGT\t1|0\n9\t107708696\tDEL_pindel_29175\tCTAAGAGTTTTTATATTTAGTAAATATTTATATTTACTAAATTTATATTTAGTAAAATATAAGACA\tC\t.\tPASS\tAC=2321;AF=0.463458;AFR_AF=0.1339;AMR_AF=0.5591;AN=5008;CS=DEL_pindel;EAS_AF=0.6567;END=107708761;EUR_AF=0.5278;NS=2504;SAS_AF=0.5757;SITEPOST=0.9991;SVTYPE=DEL\tGT\t1|0\n9\t107798567\tUW_VH_3160\tA\t<CN0>\t100\tPASS\tAC=41;AF=0.0081869;AFR_AF=0;AMR_AF=0.0058;AN=5008;CIEND=0,285;CIPOS=-425,0;CS=DEL_union;EAS_AF=0;END=107803487;EUR_AF=0.0318;MC=YL_CN_CEU_2902,BI_GS_DEL1_B5_P1653_908;NS=2504;SAS_AF=0.0051;SVTYPE=DEL\tGT\t1|0\n9\t107816812\tCINV_delly_INV00107146\tT\t<INV>\t.\tPASS\tAC=2451;AF=0.489417;AFR_AF=0.4909;AMR_AF=0.4539;AN=5008;CIEND=-305,305;CIPOS=-305,305;CS=CINV_delly;EAS_AF=0.5139;END=107817348;EUR_AF=0.4463;IMPRECISE;NS=2504;SAS_AF=0.5317;SVTYPE=INV\tGT\t1|0\n9\t109675911\tBI_GS_DEL1_B5_P1655_864\tT\t<CN0>\t100\tPASS\tAC=268;AF=0.0535144;AFR_AF=0.0038;AMR_AF=0.0476;AN=5008;CIEND=0,1;CIPOS=0,1;CS=DEL_union;EAS_AF=0.0119;END=109676565;EUR_AF=0.0686;MC=UW_VH_2394;NS=2504;SAS_AF=0.1524;SVTYPE=DEL\tGT\t1|0\n9\t112430200\tDEL_pindel_29289\tTGGCTTTGGTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCTGCCTCCCGGATTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC\tT\t.\tPASS\tAC=2552;AF=0.509585;AFR_AF=0.6838;AMR_AF=0.4424;AN=5008;CS=DEL_pindel;EAS_AF=0.4315;END=112430515;EUR_AF=0.5229;MEINFO=AluYa5,1,281,-;NS=2504;SAS_AF=0.3885;SITEPOST=0.9981;SVTYPE=DEL_ALU\tGT\t1|0\n9\t113327089\tALU_umary_ALU_7653\tG\t<INS:ME:ALU>\t.\t.\tAC=582;AF=0.116214;AFR_AF=0.0098;AMR_AF=0.0548;AN=5008;CS=ALU_umary;EAS_AF=0.249;EUR_AF=0.1292;MEINFO=AluYa5,1,281,+;NS=2504;SAS_AF=0.1534;SITEPOST=1;SVLEN=280;SVTYPE=ALU;TSD=AGAAGATTAATTATCTG\tGT\t0|1\n9\t114333161\tBI_GS_DEL1_B5_P1660_383\tA\t<CN0>\t100\tPASS\tAC=492;AF=0.0982428;AFR_AF=0.0023;AMR_AF=0.0994;AN=5008;CIEND=-11,11;CIPOS=-11,11;CS=DEL_union;EAS_AF=0.249;END=114333923;EUR_AF=0.0636;MC=BI_GS_DEL1_B4_P1660_69,UW_VH_2893;NS=2504;SAS_AF=0.1074;SVTYPE=DEL\tGT\t1|0\n9\t114653182\tBI_GS_DEL1_B1_P1660_529\tG\t<CN0>\t100\tPASS\tAC=65;AF=0.0129792;AFR_AF=0.0008;AMR_AF=0.0144;AN=5008;CIEND=-15,16;CIPOS=-15,16;CS=DEL_union;EAS_AF=0.001;END=114653934;EUR_AF=0.0328;MC=SI_BD_10021;NS=2504;SAS_AF=0.0204;SVTYPE=DEL\tGT\t1|0\n9\t115937084\tDEL_pindel_29376\tTAAGAGCTAGGGAAATTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCATGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCATCCTGGGCGACAGAGCGAGACTCCGCCTCAGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA\tT\t.\tPASS\tAC=3391;AF=0.677117;AFR_AF=0.6536;AMR_AF=0.6671;AN=5008;CS=DEL_pindel;EAS_AF=0.6915;END=115937379;EUR_AF=0.662;MEINFO=AluY,39,281,+;NS=2504;SAS_AF=0.7168;SITEPOST=0.9845;SVTYPE=DEL_ALU\tGT\t1|1\n9\t118109642\tDEL_pindel_29426\tGGGCAATCAAATCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTTGCTCTGTGGCCCAGGTGGGAGTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCACGCCCGGCTAATTTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAAGCGTGAGCCACCGCGCCCGGCC\tG\t.\tPASS\tAC=3743;AF=0.747404;AFR_AF=0.73;AMR_AF=0.7752;AN=5008;CS=DEL_pindel;EAS_AF=0.7569;END=118109987;EUR_AF=0.7674;MEINFO=AluYi,1,281,-;NS=2504;SAS_AF=0.7209;SITEPOST=0.94285;SVTYPE=DEL_ALU\tGT\t1|1\n9\t118509752\tALU_umary_ALU_7676\tT\t<INS:ME:ALU>\t.\t.\tAC=593;AF=0.118411;AFR_AF=0.1936;AMR_AF=0.0562;AN=5008;CS=ALU_umary;EAS_AF=0.1319;EUR_AF=0.0765;MEINFO=AluUndef,1,280,-;NS=2504;SAS_AF=0.09;SITEPOST=1;SVLEN=279;SVTYPE=ALU;TSD=CCCTATGGCCTCATTTAACCTT\tGT\t0|1\n9\t119477063\tDEL_pindel_29453\tTAAGAATCATGTGAGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAAGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA\tT\t.\tPASS\tAC=3258;AF=0.650559;AFR_AF=0.6649;AMR_AF=0.6686;AN=5008;CS=DEL_pindel;EAS_AF=0.63;END=119477397;EUR_AF=0.6372;MEINFO=AluYa5,1,281,+;NS=2504;SAS_AF=0.6534;SITEPOST=0.9875;SVTYPE=DEL_ALU\tGT\t1|0\n9\t121371514\tDEL_pindel_29479\tTTTATGTTTCACTTCCAAAAGATAGATTAACTGGACTGGAAATTCTGAGTTGAATA\tT\t.\tPASS\tAC=1149;AF=0.229433;AFR_AF=0.0953;AMR_AF=0.2507;AN=5008;CS=DEL_pindel;EAS_AF=0.2321;END=121371569;EUR_AF=0.2903;NS=2504;SAS_AF=0.3303;SITEPOST=0.9968;SVTYPE=DEL\tGT\t1|0\n9\t122531834\tDEL_pindel_29512\tTAAGAAAATTGCGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAA\tT\t.\tPASS\tAC=4280;AF=0.854633;AFR_AF=0.7746;AMR_AF=0.8818;AN=5008;CS=DEL_pindel;EAS_AF=0.9107;END=122532152;EUR_AF=0.8509;MEINFO=AluYa5,1,281,+;NS=2504;SAS_AF=0.8896;SITEPOST=0.9914;SVTYPE=DEL_ALU\tGT\t1|1\n9\t123055184\tALU_umary_ALU_7688\tT\t<INS:ME:ALU>\t.\t.\tAC=2019;AF=0.403155;AFR_AF=0.2769;AMR_AF=0.3775;AN=5008;CS=ALU_umary;EAS_AF=0.4405;EUR_AF=0.5;MEINFO=AluYa1_1,2,281,-;NS=2504;SAS_AF=0.454;SITEPOST=1;SVLEN=279;SVTYPE=ALU;TSD=TCCTTTACTTTGTT\tGT\t1|0\n9\t124411470\tBI_GS_DEL1_B2_P1670_318\tA\t<CN0>\t100\tPASS\tAC=1039;AF=0.207468;AFR_AF=0.0378;AMR_AF=0.196;AN=5008;CIEND=-1,2;CIPOS=-1,2;CS=DEL_union;EAS_AF=0.2867;END=124411788;EUR_AF=0.2008;NS=2504;SAS_AF=0.3701;SVTYPE=DEL\tGT\t0|1\n9\t124642001\tDEL_pindel_29559\tTTTGGGAGGCTGAGGTGGGAGAACTGCTTGAAGCCCTGAATCTAGACCAGGCTGGGCAACATAGCGAGACCCCACTTCTACAAAAAATTAAAAATTAGTCAGCTCTGGTGGTACGCACCTGCGGTCCTAACTAC\tT\t.\tPASS\tAC=2828;AF=0.564696;AFR_AF=0.5651;AMR_AF=0.4683;AN=5008;CS=DEL_pindel;EAS_AF=0.6647;END=124642134;EUR_AF=0.5427;NS=2504;SAS_AF=0.5521;SITEPOST=0.9862;SVTYPE=DEL\tGT\t0|1\n9\t128980176\tALU_umary_ALU_7709\tT\t<INS:ME:ALU>\t.\t.\tAC=1460;AF=0.291534;AFR_AF=0.1596;AMR_AF=0.2349;AN=5008;CS=ALU_umary;EAS_AF=0.3621;EUR_AF=0.3419;MEINFO=AluUndef,140,281,+;NS=2504;SAS_AF=0.3855;SITEPOST=1;SVLEN=141;SVTYPE=ALU;TSD=AAGAATCTCTCACCTT\tGT\t0|1\n9\t131412056\tEM_DL_DEL101148848\tG\t<CN0>\t100\tPASS\tAC=3237;AF=0.646366;AFR_AF=0.4463;AMR_AF=0.7954;AN=5008;CIEND=-150,150;CIPOS=-150,150;CS=DEL_union;EAS_AF=0.5099;END=131413976;EUR_AF=0.8698;MC=BI_GS_DEL1_B3_P1677_17,YL_CN_GWD_3203,YL_CN_ASW_2335;NS=2504;SAS_AF=0.7219;SVTYPE=DEL\tGT\t1|1\n9\t134391120\tDEL_pindel_29763\tAACAGGACACTTCCTCACACGGAGCACTTCCTCTAACATGGAGCACTTCCTGTAAC\tA\t.\tPASS\tAC=2134;AF=0.426118;AFR_AF=0.3109;AMR_AF=0.428;AN=5008;CS=DEL_pindel;EAS_AF=0.499;END=134391175;EUR_AF=0.4404;NS=2504;SAS_AF=0.4908;SITEPOST=0.9988;SVTYPE=DEL\tGT\t0|1\n9\t135296997\tDEL_pindel_29789\tTGAGAATCCTGGGTTCTCATGCTCTGGTTTCTCTTCAAATCGTATAAATCTTTCGCCTTTTACTAAAGATTTCTGTG\tT\t.\tPASS\tAC=4004;AF=0.799521;AFR_AF=0.7156;AMR_AF=0.8256;AN=5008;CS=DEL_pindel;EAS_AF=0.8462;END=135297073;EUR_AF=0.832;NS=2504;SAS_AF=0.8129;SITEPOST=0.97205;SVTYPE=DEL\tGT\t1|1\n9\t135938579\tDUP_gs_CNV_9_135938579_135956026\tG\t<CN0>,<CN2>\t.\tPASS\tAC=13,254;AF=0.00259585,0.0507189;AFR_AF=0.0023,0.0098;AMR_AF=0.0029,0.0331;AN=5008;CS=DUP_gs;EAS_AF=0.004,0.1141;END=135956026;EUR_AF=0.001,0.0417;NS=2504;SAS_AF=0.0031,0.0624;SITEPOST=1;SVTYPE=CNV\tGT\t0|2\n9\t136379210\tDEL_pindel_29807\tTAAGCAGTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGCGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCTACCACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGC\tT\t.\tPASS\tAC=4578;AF=0.914137;AFR_AF=0.8933;AMR_AF=0.9078;AN=5008;CS=DEL_pindel;EAS_AF=0.9484;END=136379552;EUR_AF=0.8986;MEINFO=AluYc1,2,281,-;NS=2504;SAS_AF=0.9274;SITEPOST=1;SVTYPE=DEL_ALU\tGT\t1|1\n9\t136414101\tDEL_pindel_29808\tTCACAGTTTCCTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGTCCGCCACTACGCCCGGCTAATTTTTTTTTGTATTTTTAGTAGAGACAGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC\tT\t.\tPASS\tAC=2792;AF=0.557508;AFR_AF=0.5802;AMR_AF=0.5504;AN=5008;CS=DEL_pindel;EAS_AF=0.4315;END=136414425;EUR_AF=0.6571;MEINFO=AluYa5,1,281,-;NS=2504;SAS_AF=0.5593;SITEPOST=0.9905;SVTYPE=DEL_ALU\tGT\t0|1\n9\t136761039\tDEL_pindel_29826\tCACACTAAAATCTTTTTTTTTTTTTTTTTTTTTAATTGATCATTCTTGGGTGTTTCTCGCAGAGGGGGATTTGGCAGGGTCATAGGACAATAGTGGAGGGAAGGTCAGCAGATAAACAAGTGAACAAAGGTCTCTGGTTTTCCTAGGCAGAGGACCCTGCGGCCTTCCGCAGTGTTTGTGTCCCTGGGTACTTAAGATTAGGGAGTGGTGATGACTCTTAACGAGCATA\tC\t.\tPASS\tAC=1166;AF=0.232827;AFR_AF=0.292;AMR_AF=0.1974;AN=5008;CS=DEL_pindel;EAS_AF=0.1637;END=136761267;EUR_AF=0.2107;MEINFO=SVA_E,1441,1627,-;NS=2504;SAS_AF=0.272;SITEPOST=0.999;SVTYPE=DEL_SVA\tGT\t1|0\n9\t138214060\tUW_VH_17355\tT\t<CN0>\t100\tPASS\tAC=2345;AF=0.468251;AFR_AF=0.7216;AMR_AF=0.5259;AN=5008;CIEND=0,532;CIPOS=-544,0;CS=DEL_union;EAS_AF=0.3185;END=138217603;EUR_AF=0.4026;MC=UW_VH_815,UW_VH_5243,YL_CN_GBR_2247,UW_VH_19324,SI_BD_10198,BI_GS_DEL1_B1_P1684_188,EM_DL_DEL103143,UW_VH_21246,UW_VH_3652,UW_VH_7806,UW_VH_4805,UW_VH_5220,UW_VH_17663,YL_CN_TSI_2243;NS=2504;SAS_AF=0.3067;SVTYPE=DEL\tGT\t1|1\n9\t138479100\tBI_GS_DEL1_B1_P1684_388\tA\t<CN0>\t100\tPASS\tAC=4100;AF=0.81869;AFR_AF=0.8018;AMR_AF=0.8516;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.8175;END=138480204;EUR_AF=0.7883;MC=SI_BD_10204,YL_CN_YRI_2956,YL_CN_GBR_2248,UW_VH_5244,UW_VH_21186,UW_VH_2722,EM_DL_DEL101152234,UW_VH_6701,YL_CN_ITU_2315,YL_CN_PEL_2070,UW_VH_17465,YL_CN_STU_2316,UW_VH_20623;NS=2504;SAS_AF=0.8507;SVTYPE=DEL\tGT\t1|0\n9\t138562333\tDEL_pindel_29859\tACGGGGGAGGAGAGAGTTCTGGCCCCCCCATCAGCCTCTCTCGCTTCTGCAGCTCTC\tA\t.\tPASS\tAC=3164;AF=0.631789;AFR_AF=0.5635;AMR_AF=0.6427;AN=5008;CS=DEL_pindel;EAS_AF=0.6736;END=138562389;EUR_AF=0.66;NS=2504;SAS_AF=0.6442;SITEPOST=0.9621;SVTYPE=DEL\tGT\t0|1\n9\t140253527\tUW_VH_816\tT\t<CN0>\t100\tPASS\tAC=3429;AF=0.684704;AFR_AF=0.4561;AMR_AF=0.7075;AN=5008;CIEND=0,427;CIPOS=-423,0;CS=DEL_union;EAS_AF=0.8532;END=140255973;EUR_AF=0.6561;MC=YL_CN_ASW_2378,SI_BD_10228,EM_DL_DEL103176,BI_GS_DEL1_B1_P1686_137,YL_CN_FIN_2208,YL_CN_GIH_1849;NS=2504;SAS_AF=0.8333;SVTYPE=DEL\tGT\t1|1\n10\t1292107\tALU_umary_ALU_7740\tG\t<INS:ME:ALU>\t.\t.\tAC=1011;AF=0.201877;AFR_AF=0.0106;AMR_AF=0.1787;AN=5008;CS=ALU_umary;EAS_AF=0.2917;EUR_AF=0.2296;MEINFO=AluYa5,1,281,+;NS=2504;SAS_AF=0.3558;SITEPOST=1;SVLEN=280;SVTYPE=ALU;TSD=AAAAATCCTATTGAAGG\tGT\t0|1\n10\t1537791\tDEL_pindel_30029\tGCTTTAGAGGAGCCTTAGAAATATTCCATTCCATTAGTTAGAATATGATGAAAAGTACAAACTTTTCTAGTCATCATGGTTGTCATTATTAACATGATTGTCACCATA\tG\t.\tPASS\tAC=1508;AF=0.301118;AFR_AF=0.2224;AMR_AF=0.2939;AN=5008;CS=DEL_pindel;EAS_AF=0.3204;END=1537898;EUR_AF=0.3926;NS=2504;SAS_AF=0.2986;SITEPOST=1;SVTYPE=DEL\tGT\t0|1\n10\t2077560\tALU_umary_ALU_7741\tA\t<INS:ME:ALU>\t.\t.\tAC=2064;AF=0.412141;AFR_AF=0.2874;AMR_AF=0.428;AN=5008;CS=ALU_umary;EAS_AF=0.4435;EUR_AF=0.4533;MEINFO=AluYa5,2,274,+;NS=2504;SAS_AF=0.4949;SITEPOST=1;SVLEN=272;SVTYPE=ALU;TSD=AGAAATTTCAGCATTTTA\tGT\t0|1\n10\t3083763\tSVA_umary_SVA_433\tT\t<INS:ME:SVA>\t.\t.\tAC=2303;AF=0.459864;AFR_AF=0.5492;AMR_AF=0.4207;AN=5008;CS=SVA_umary;EAS_AF=0.2768;EUR_AF=0.5567;MEINFO=SVA,329,1626,+;NS=2504;SAS_AF=0.456;SITEPOST=1;SVLEN=1297;SVTYPE=SVA;TSD=AAATGAAAAATGGT\tGT\t1|0\n10\t3569025\tALU_umary_ALU_7750\tT\t<INS:ME:ALU>\t.\t.\tAC=1674;AF=0.334265;AFR_AF=0.1157;AMR_AF=0.3343;AN=5008;CS=ALU_umary;EAS_AF=0.3274;EUR_AF=0.4891;MEINFO=AluUndef,4,281,+;NS=2504;SAS_AF=0.4775;SITEPOST=1;SVLEN=277;SVTYPE=ALU;TSD=AAAAATTCTGTGAACTT\tGT\t1|1\n10\t4290058\tUW_VH_11588\tA\t<CN0>\t100\tPASS\tAC=3522;AF=0.703275;AFR_AF=0.2769;AMR_AF=0.8069;AN=5008;CIEND=0,482;CIPOS=-544,0;CS=DEL_union;EAS_AF=0.8393;END=4291690;EUR_AF=0.8887;MC=UW_VH_6064,YL_CN_CHB_2369,YL_CN_FIN_2219,YL_CN_PEL_2105,YL_CN_ACB_2692,UW_VH_5266,EM_DL_DEL1096253,YL_CN_CEU_2991,YL_CN_PUR_2835,YL_CN_MXL_1989,YL_CN_ITU_2339,YL_CN_KHV_2433,YL_CN_CDX_2010,YL_CN_ASW_2393,YL_CN_JPT_2532,YL_CN_TSI_2264,UW_VH_13698,YL_CN_BEB_1991,YL_CN_YRI_2995,YL_CN_PJL_2455,YL_CN_CHS_2402,YL_CN_GBR_2282,UW_VH_17482,BI_GS_DEL1_B2_P1692_221,SI_BD_10327,UW_VH_1951;NS=2504;SAS_AF=0.8753;SVTYPE=DEL\tGT\t1|1\n10\t4634801\tDEL_pindel_30123\tCAAGAAAAAGAGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAATGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAA\tC\t.\tPASS\tAC=4328;AF=0.864217;AFR_AF=0.8298;AMR_AF=0.8602;AN=5008;CS=DEL_pindel;EAS_AF=0.8849;END=4635120;EUR_AF=0.8738;MEINFO=AluYa5,1,281,+;NS=2504;SAS_AF=0.8824;SITEPOST=0.98;SVTYPE=DEL_ALU\tGT\t1|1\n10\t4708523\tBI_GS_DEL1_B1_P1692_679\tT\t<CN0>\t100\tPASS\tAC=3602;AF=0.719249;AFR_AF=0.4387;AMR_AF=0.8213;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.8859;END=4710520;EUR_AF=0.7614;MC=YL_CN_LWK_2264,YL_CN_TSI_2265,SI_BD_10333,EM_DL_DEL1096458;NS=2504;SAS_AF=0.8108;SVTYPE=DEL\tGT\t1|1\n10\t6064768\tDEL_pindel_30146\tCAGCCTTCGAGAAAGGACAACAAGCATTGGCCTCTTTGAAGCCTTCCAATAACTGTGCAGGGTGATATGGGGGA\tC\t.\tPASS\tAC=1211;AF=0.241813;AFR_AF=0.0477;AMR_AF=0.2896;AN=5008;CS=DEL_pindel;EAS_AF=0.3472;END=6064841;EUR_AF=0.34;NS=2504;SAS_AF=0.2607;SITEPOST=0.9999;SVTYPE=DEL\tGT\t0|1\n10\t6097370\tDEL_pindel_30150\tCTTGGCCATCACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCACCGCCCTTAATCCATTTAATCCTGAGTGGACACAGCACATGTTTCAGAGAGCACAGGGTTGGGGGTAAGGTCACAGATCAACAGGATCCCAAGGCAGAGGAATTTTTCTTAGTGCAGAACAAAATGAAAAGTCTCCCATGTCTACCTCTCTCTACACAGACACGGCAACCATCCGATTTCTCAATCTTTTCCCCACCTTTCCCGCCTTTCCATTCCACAAAGCCGCCATTGTCATCCTGGCCCGCTCTCAATGAGCTGTTGGGCACACCTCCCAGACGGGGTGGTGGCCGGGCAGAGGGGCTCCTCACTTCCCAGTAGGGGCGGCCGGGCAGAGGCGCCCCCCACCTCCCGGACGGGGCGGCTGGCCGGGCGGGGGGGCCGACTCCCCCCACCTCCCTCCCGGACGGGGCGGCTGGCCGGGCAGAGGGGCTCCTCACTTCCCAGTAGGGG\tC\t.\tPASS\tAC=3212;AF=0.641374;AFR_AF=0.553;AMR_AF=0.7219;AN=5008;CS=DEL_pindel;EAS_AF=0.5764;END=6097868;EUR_AF=0.7097;MEINFO=SVA_F,1097,1363,-;NS=2504;SAS_AF=0.7004;SITEPOST=0.983;SVTYPE=DEL_SVA\tGT\t1|1\n10\t7077041\tBI_GS_DEL1_B2_P1695_66\tT\t<CN0>\t100\tPASS\tAC=1131;AF=0.225839;AFR_AF=0.0598;AMR_AF=0.245;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.0883;END=7078303;EUR_AF=0.4811;MC=YL_CN_PUR_2843,YL_CN_GBR_2289,UW_VH_18058,YL_CN_IBS_2131,YL_CN_CEU_3000,UW_VH_821,YL_CN_TSI_2268,EM_DL_DEL1098330;NS=2504;SAS_AF=0.316;SVTYPE=DEL\tGT\t1|0\n10\t7995834\tBI_GS_DEL1_B1_P1695_949\tT\t<CN0>\t100\tPASS\tAC=989;AF=0.197484;AFR_AF=0.0877;AMR_AF=0.1931;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.3065;END=7996925;EUR_AF=0.2028;MC=UW_VH_8150;NS=2504;SAS_AF=0.2311;SVTYPE=DEL\tGT\t1|0\n10\t9097749\tDEL_pindel_30198\tTCATATTTTACTTTATATATATATATATATATATATATATATATATATATA\tT\t.\tPASS\tAC=3865;AF=0.771765;AFR_AF=0.7224;AMR_AF=0.7637;AN=5008;CS=DEL_pindel;EAS_AF=0.8661;END=9097799;EUR_AF=0.7266;NS=2504;SAS_AF=0.7935;SITEPOST=0.98755;SVTYPE=DEL\tGT\t1|0\n10\t9436189\tDEL_pindel_30207\tGGGTGACTTACTAAACAACATGAATTTATCTCTCACTCTTCTGGATGCTGGAAGTCCCAAGAT\tG\t.\tPASS\tAC=2059;AF=0.411142;AFR_AF=0.0832;AMR_AF=0.4625;AN=5008;CS=DEL_pindel;EAS_AF=0.5823;END=9436251;EUR_AF=0.5219;NS=2504;SAS_AF=0.5276;SITEPOST=0.9998;SVTYPE=DEL\tGT\t1|1\n10\t9474855\tALU_umary_ALU_7778\tT\t<INS:ME:ALU>\t.\t.\tAC=1341;AF=0.267772;AFR_AF=0.0454;AMR_AF=0.2305;AN=5008;CS=ALU_umary;EAS_AF=0.4048;EUR_AF=0.3877;MEINFO=AluYa5,1,281,-;NS=2504;SAS_AF=0.3303;SITEPOST=1;SVLEN=280;SVTYPE=ALU;TSD=TATTTTTTT\tGT\t1|1\n10\t9510994\tALU_umary_ALU_7779\tT\t<INS:ME:ALU>\t.\t.\tAC=3407;AF=0.680312;AFR_AF=0.5756;AMR_AF=0.7017;AN=5008;CS=ALU_umary;EAS_AF=0.7133;EUR_AF=0.7256;MEINFO=AluYa5,1,281,-;NS=2504;SAS_AF=0.726;SITEPOST=0.999;SVLEN=280;SVTYPE=ALU;TSD=TGCAAATTTTTTT\tGT\t1|0\n10\t10075348\tDEL_pindel_30216\tGTATATATATATGTATATGTGTGTGTATATATGTATATGTGTGTGTGTGTA\tG\t.\tPASS\tAC=1278;AF=0.255192;AFR_AF=0.3056;AMR_AF=0.2738;AN=5008;CS=DEL_pindel;EAS_AF=0.2073;END=10075398;EUR_AF=0.2744;NS=2504;SAS_AF=0.2035;SITEPOST=0.984;SVTYPE=DEL\tGT\t0|1\n10\t10493409\tDEL_pindel_30224\tTGTTCTTTTTCTTTTTTTTTTCTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCCGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCAGAGTAGCGGGGCCACAGGCACCGACCACCACGCCTGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC\tT\t.\tPASS\tAC=2520;AF=0.503195;AFR_AF=0.4599;AMR_AF=0.5735;AN=5008;CS=DEL_pindel;EAS_AF=0.4792;END=10493732;EUR_AF=0.508;MEINFO=AluYb3a1,1,281,-;NS=2504;SAS_AF=0.5317;SITEPOST=0.99445;SVTYPE=DEL_ALU\tGT\t0|1\n10\t12596183\tBI_GS_DEL1_B5_P1700_571\tA\t<CN0>\t100\tPASS\tAC=1290;AF=0.257588;AFR_AF=0.1286;AMR_AF=0.2911;AN=5008;CIEND=0,1;CIPOS=0,1;CS=DEL_union;EAS_AF=0.3294;END=12596570;EUR_AF=0.4185;NS=2504;SAS_AF=0.1687;SVTYPE=DEL\tGT\t1|1\n10\t14936348\tDEL_pindel_30316\tAGCAAAGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGCGATCTCGACTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGTGTAGCTGGGACTACAGGCGCCCGCCACCACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTGTTAGCCAAGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC\tA\t.\tPASS\tAC=2115;AF=0.422324;AFR_AF=0.5923;AMR_AF=0.366;AN=5008;CS=DEL_pindel;EAS_AF=0.3829;END=14936665;EUR_AF=0.2485;MEINFO=AluYg,1,281,-;NS=2504;SAS_AF=0.4519;SITEPOST=0.9983;SVTYPE=DEL_ALU\tGT\t0|1\n10\t15532464\tDEL_pindel_30325\tTCTACATGAGTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTTTGTCACCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCAGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGTGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCACCCGGCC\tT\t.\tPASS\tAC=2926;AF=0.584265;AFR_AF=0.5393;AMR_AF=0.6326;AN=5008;CS=DEL_pindel;EAS_AF=0.6161;END=15532774;EUR_AF=0.5567;MEINFO=AluYa5,1,281,-;NS=2504;SAS_AF=0.6063;SITEPOST=0.9929;SVTYPE=DEL_ALU\tGT\t1|1\n10\t18503073\tBI_GS_DEL1_B1_P1706_255\tA\t<CN0>\t100\tPASS\tAC=2951;AF=0.589257;AFR_AF=0.3169;AMR_AF=0.7608;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.506;END=18503589;EUR_AF=0.7903;MC=DEL_pindel_30365,SI_BD_10419;NS=2504;SAS_AF=0.7147;SVTYPE=DEL\tGT\t1|0\n10\t19216666\tL1_umary_LINE1_1920\tA\t<INS:ME:LINE1>\t.\t.\tAC=629;AF=0.125599;AFR_AF=0.1452;AMR_AF=0.0447;AN=5008;CS=L1_umary;EAS_AF=0.1647;EUR_AF=0.0895;MEINFO=LINE1,5232,5989,+;NS=2504;SAS_AF=0.1534;SITEPOST=1;SVLEN=757;SVTYPE=LINE1;TSD=AAGAAGTGAGACATA\tGT\t0|1\n10\t19397308\tDEL_pindel_30395\tTGTTTTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAAGACGGAGTCTCGCTCTGTCGCCCAGGCCGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGTGCCCGCCACCGCGCCCGGCTAATTTTTTGTATTTTTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC\tT\t.\tPASS\tAC=2705;AF=0.540136;AFR_AF=0.6604;AMR_AF=0.5533;AN=5008;CS=DEL_pindel;EAS_AF=0.4871;END=19397645;EUR_AF=0.4851;MEINFO=AluYb6_2,1,280,-;NS=2504;SAS_AF=0.4796;SITEPOST=0.9959;SVTYPE=DEL_ALU\tGT\t1|0\n10\t19504645\tDEL_pindel_30398\tAATAAATTAGTATAAATAATTTAGTATAAATAATAATTAGTATAAACAAATAATTTAGTATAATTAGTATAAATAAATAGTATATTTATTTATATAAATAATTAGTATAAATACATAATTTAGTATAAATAATAAAACTC\tA\t.\tPASS\tAC=1518;AF=0.303115;AFR_AF=0.2753;AMR_AF=0.4236;AN=5008;CS=DEL_pindel;EAS_AF=0.2827;END=19504784;EUR_AF=0.3887;NS=2504;SAS_AF=0.1881;SITEPOST=0.9989;SVTYPE=DEL\tGT\t1|0\n10\t19996544\tYL_CN_PEL_2120\tC\t<CN0>\t100\tPASS\tAC=1834;AF=0.366214;AFR_AF=0.1498;AMR_AF=0.5202;AN=5008;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0.3978;END=19998179;EUR_AF=0.3966;MC=YL_CN_STU_2348,YL_CN_CLM_2050;NS=2504;SAS_AF=0.4857;SVTYPE=DEL\tGT\t0|1\n10\t20667245\tDEL_pindel_30429\tTAAAAGATTAGTAAGGGCCGGGCGTGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCATGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAA\tT\t.\tPASS\tAC=2449;AF=0.489018;AFR_AF=0.292;AMR_AF=0.5749;AN=5008;CS=DEL_pindel;EAS_AF=0.6875;END=20667565;EUR_AF=0.4841;MEINFO=AluYa5,1,281,+;NS=2504;SAS_AF=0.4949;SITEPOST=0.9946;SVTYPE=DEL_ALU\tGT\t0|1\n10\t23635492\tDEL_pindel_30486\tAGAAAAACACGCAGCACATGCATGAGGCAACTGCAAGAGAAATACCAACTAGGCCTTTGAAGGACTCTATTCCTTCTTCCTAAACCACTACTAGGGAAAACATTGTTTAAAGATGTCAGTGTTTTGGCTG\tA\t.\tPASS\tAC=3311;AF=0.661142;AFR_AF=0.7277;AMR_AF=0.6542;AN=5008;CS=DEL_pindel;EAS_AF=0.8294;END=23635621;EUR_AF=0.4622;NS=2504;SAS_AF=0.6074;SITEPOST=0.9994;SVTYPE=DEL\tGT\t1|0\n10\t24376838\tBI_GS_DEL1_B2_P1712_268\tT\t<CN0>\t100\tPASS\tAC=1127;AF=0.22504;AFR_AF=0.0469;AMR_AF=0.2738;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.0417;END=24378445;EUR_AF=0.493;MC=BI_GS_DEL1_B3_P1712_22,YL_CN_ITU_2355,YL_CN_GIH_1874,YL_CN_STU_2353,YL_CN_TSI_2281,UW_VH_1953,YL_CN_MXL_2012;NS=2504;SAS_AF=0.3446;SVTYPE=DEL\tGT\t1|0\n10\t25707715\tL1_umary_LINE1_1934\tT\t<INS:ME:LINE1>\t.\t.\tAC=2404;AF=0.480032;AFR_AF=0.4622;AMR_AF=0.4135;AN=5008;CS=L1_umary;EAS_AF=0.2778;EUR_AF=0.6491;MEINFO=LINE1,73,6018,-;NS=2504;SAS_AF=0.5859;SITEPOST=1;SVLEN=5945;SVTYPE=LINE1;TSD=GAAAATAATCTTTTGTTTGACTTATTTTT\tGT\t0|1\n10\t26185093\tDEL_pindel_30541\tAAAAAAAACAGGTAATATATATGAAAACTTCTATAAGCCCTAAGTGCTATATAAATGTGACTATTTTTT\tA\t.\tPASS\tAC=813;AF=0.16234;AFR_AF=0.1641;AMR_AF=0.1859;AN=5008;CS=DEL_pindel;EAS_AF=0.2044;END=26185161;EUR_AF=0.1471;NS=2504;SAS_AF=0.1155;SITEPOST=0.992;SVTYPE=DEL\tGT\t1|0\n10\t26354751\tDEL_pindel_30545\tCAAAAAGAGCAGTGGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGACGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACACGGTGAAACCCCGTCTCTACTAAAAATACAAAAATTAGCCGGGCATGGTGGCGCGTGCCTATAGTCCCAGCTACACGGGAGGCTGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGTCGAGATCGCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAAACTCCGTCTCAAAAAAAAAAAAAAAAAA\tC\t.\tPASS\tAC=1708;AF=0.341054;AFR_AF=0.2723;AMR_AF=0.3112;AN=5008;CS=DEL_pindel;EAS_AF=0.2817;END=26355068;EUR_AF=0.4533;MEINFO=AluYg6,1,281,+;NS=2504;SAS_AF=0.4008;SITEPOST=0.9983;SVTYPE=DEL_ALU\tGT\t1|1\n10\t26767941\tDEL_pindel_30548\tTAAAAATTGACATATATTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGGCCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAA\tT\t.\tPASS\tAC=3447;AF=0.688299;AFR_AF=0.7186;AMR_AF=0.6787;AN=5008;CS=DEL_pindel;EAS_AF=0.7093;END=26768247;EUR_AF=0.6521;MEINFO=AluY,17,281,+;NS=2504;SAS_AF=0.6697;SITEPOST=0.9574;SVTYPE=DEL_ALU\tGT\t0|1\n10\t26999005\tEM_DL_DEL09523\tT\t<CN0>\t100\tPASS\tAC=2423;AF=0.483826;AFR_AF=0.4682;AMR_AF=0.6412;AN=5008;CIEND=-150,150;CIPOS=-150,150;CS=DEL_union;EAS_AF=0.3998;END=27002143;EUR_AF=0.6223;MC=UW_VH_18845,UW_VH_25423,UW_VH_11733,UW_VH_7158,UW_VH_12591,UW_VH_7186,UW_VH_4607,SI_BD_10463,UW_VH_26,UW_VH_10607,YL_CN_CHB_2404,UW_VH_19256,UW_VH_18901,UW_VH_13907,UW_VH_21594,BI_GS_DEL1_B1_P1714_841,UW_VH_16194,UW_VH_13612,UW_VH_20731;NS=2504;SAS_AF=0.3374;SVTYPE=DEL\tGT\t1|1\n10\t27224091\tYL_CN_STU_2356\tC\t<CN0>\t100\tPASS\tAC=529;AF=0.105631;AFR_AF=0.0446;AMR_AF=0.1455;AN=5008;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0.004;END=27228168;EUR_AF=0.2485;NS=2504;SAS_AF=0.1176;SVTYPE=DEL\tGT\t1|0\n10\t27638254\tBI_GS_DEL1_B5_P1715_643\tA\t<CN0>\t100\tPASS\tAC=775;AF=0.154752;AFR_AF=0.0991;AMR_AF=0.1037;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.3929;END=27642097;EUR_AF=0.0517;MC=YL_CN_ITU_2357,EM_DL_DEL09558,UW_VH_2398,SI_BD_10469;NS=2504;SAS_AF=0.1268;SVTYPE=DEL\tGT\t0|1\n10\t29102541\tALU_umary_ALU_7873\tT\t<INS:ME:ALU>\t.\t.\tAC=1948;AF=0.388978;AFR_AF=0.3495;AMR_AF=0.3329;AN=5008;CS=ALU_umary;EAS_AF=0.4196;EUR_AF=0.4304;MEINFO=AluYa5,1,281,-;NS=2504;SAS_AF=0.408;SITEPOST=1;SVLEN=280;SVTYPE=ALU;TSD=CTAAATCATCTATT\tGT\t0|1\n10\t29712145\tDEL_pindel_30625\tTTGCATTGTTTTTTTTTTTTTTTTTTTTTTTTTTTTAATTTTTTTTTTTTTTTTATTATACTCTAAGTTTTAGGGTACATATGCACATTGTGCAGGTTAGTTACATATGTATACATGTGCCATGCTGGTGCGCTGCACCCACTAACGTGTCATCTAGCATTAGGTATATCTCCCAATGCTATCCCTCCCCCCTCCCCCGACCCCACCACAGTCCCCAGAGTGTGATATTCCCCTTCCTGTGTCCATGTGATCTCATTGTTCAATTCCCACCTATGAGTGAGAATATGCGGTGTTTGGTTTTTTGTTCTTGCGATAGTTTACTGAGAATGATGGTTTCCAATTTCATCCATGTCCCTACAAAGGACATGAACTCATCATTTTTTATGGCTGCATAGTATTCCATGGTGTATATGTGCCACATTTTCTTAATCCAGTCTATCATTGTTGGACATTTGGGTTGGTTCCAAGTCTTTGCTATTGTGAATAGTGCCGCAATAAACATACGTGTGCATGTGTCTTTATAGCAGCATGATTTATAGTCCTTTGGGTATATTGAAAACTGGCACAAGACAGGGA\tT\t.\tPASS\tAC=1817;AF=0.362819;AFR_AF=0.3169;AMR_AF=0.3818;AN=5008;CS=DEL_pindel;EAS_AF=0.4444;END=29712720;EUR_AF=0.3479;MEINFO=LINE1,5524,6019,-;NS=2504;SAS_AF=0.3425;SITEPOST=0.9998;SVTYPE=DEL_LINE1\tGT\t1|0\n10\t29883209\tDEL_pindel_30628\tGATCTGAAACACTCCTAGGTCCCAACCATTTCGGATGAGAGATACTCAACCTGTAT\tG\t.\tPASS\tAC=2192;AF=0.4377;AFR_AF=0.5363;AMR_AF=0.464;AN=5008;CS=DEL_pindel;EAS_AF=0.253;END=29883264;EUR_AF=0.4712;NS=2504;SAS_AF=0.4417;SITEPOST=0.9971;SVTYPE=DEL\tGT\t1|1\n10\t29918527\tBI_GS_DEL1_B2_P1717_641\tG\t<CN0>\t100\tPASS\tAC=379;AF=0.0756789;AFR_AF=0.0265;AMR_AF=0.1844;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.001;END=29918997;EUR_AF=0.1243;MC=DEL_pindel_30630;NS=2504;SAS_AF=0.092;SVTYPE=DEL\tGT\t1|0\n10\t32705726\tDEL_pindel_30681\tAATATTCTATTCGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACACGGTGAAACCCCGTCTCTACTAAAAAATACAAAAAATTAGCCGGGCGTGGTAGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCGCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAATATATATATATATATAT\tA\t.\tPASS\tAC=3947;AF=0.788139;AFR_AF=0.7443;AMR_AF=0.7896;AN=5008;CS=DEL_pindel;EAS_AF=0.8165;END=32706064;EUR_AF=0.7942;MEINFO=AluYc1,1,281,+;NS=2504;SAS_AF=0.8108;SITEPOST=0.9568;SVTYPE=DEL_ALU\tGT\t1|0\n10\t34684468\tDEL_pindel_30726\tCAAGAAAAACATCATCGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGCGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCCAACCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAA\tC\t.\tPASS\tAC=2561;AF=0.511382;AFR_AF=0.6747;AMR_AF=0.4654;AN=5008;CS=DEL_pindel;EAS_AF=0.4117;END=34684793;EUR_AF=0.4294;MEINFO=AluYb6_2,1,281,+;NS=2504;SAS_AF=0.5102;SITEPOST=0.9949;SVTYPE=DEL_ALU\tGT\t1|0\n10\t35593206\tDEL_pindel_30759\tGCTTTTTTCTCCTTTTATTTTTTTTTTTTTTTTATTTTTTATTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCTTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCTCCCGGC\tG\t.\tPASS\tAC=1908;AF=0.38099;AFR_AF=0.475;AMR_AF=0.389;AN=5008;CS=DEL_pindel;EAS_AF=0.3462;END=35593536;EUR_AF=0.2992;MEINFO=AluYa5,2,281,-;NS=2504;SAS_AF=0.3681;SITEPOST=0.9998;SVTYPE=DEL_ALU\tGT\t1|1\n10\t46262157\tDUP_uwash_chr10_46262157_46305352\tA\t<CN2>,<CN3>,<CN4>\t.\tPASS\tAC=4947,58,3;AF=0.987819,0.0115815,0.00059904;AFR_AF=0.9561,0.0416,0.0023;AMR_AF=0.9957,0.0043,0;AN=5008;CS=DUP_uwash;EAS_AF=1,0,0;END=46305352;EUR_AF=1,0,0;NS=2504;SAS_AF=1,0,0;SITEPOST=1;SVTYPE=CNV\tGT\t1|1\n10\t46551272\tDUP_uwash_chr10_46551272_46693058\tC\t<CN2>,<CN3>\t.\tPASS\tAC=4883,97;AF=0.97504,0.019369;AFR_AF=0.9834,0.0129;AMR_AF=0.9813,0.0115;AN=5008;CS=DUP_uwash;EAS_AF=0.997,0.002;END=46693058;EUR_AF=0.9513,0.0378;NS=2504;SAS_AF=0.9611,0.0327;SITEPOST=1;SVTYPE=CNV\tGT\t2|1\n10\t46976292\tDUP_gs_CNV_10_46976292_47023561\tT\t<CN2>,<CN3>,<CN4>\t.\tPASS\tAC=4472,357,91;AF=0.892971,0.0712859,0.0181709;AFR_AF=0.8956,0.0711,0.0098;AMR_AF=0.9063,0.0605,0.0202;AN=5008;CS=DUP_gs;EAS_AF=0.9544,0.0357,0.002;END=47023561;EUR_AF=0.825,0.1083,0.0388;NS=2504;SAS_AF=0.8865,0.0777,0.0235;SITEPOST=0.9996;SVTYPE=CNV\tGT\t3|2\n10\t47007970\tDUP_gs_CNV_10_47007970_47086710\tT\t<CN2>,<CN3>,<CN4>\t.\tPASS\tAC=4481,346,97;AF=0.894768,0.0690895,0.019369;AFR_AF=0.8971,0.0719,0.0091;AMR_AF=0.9063,0.0576,0.0231;AN=5008;CS=DUP_gs;EAS_AF=0.9544,0.0357,0.002;END=47086710;EUR_AF=0.83,0.1024,0.0417;NS=2504;SAS_AF=0.8885,0.0736,0.0256;SITEPOST=0.9995;SVTYPE=CNV\tGT\t3|3\n10\t47089972\tDUP_gs_CNV_10_47089972_47150813\tG\t<CN2>,<CN3>,<CN4>\t.\tPASS\tAC=4471,366,86;AF=0.892772,0.0730831,0.0171725;AFR_AF=0.8903,0.0772,0.0083;AMR_AF=0.9063,0.0576,0.0231;AN=5008;CS=DUP_gs;EAS_AF=0.9544,0.0357,0.002;END=47150813;EUR_AF=0.83,0.1133,0.0328;NS=2504;SAS_AF=0.8875,0.0757,0.0245;SITEPOST=0.9997;SVTYPE=CNV\tGT\t3|3\n10\t47383857\tDUP_gs_CNV_10_47383857_47395064\tT\t<CN0>,<CN2>,<CN3>\t.\tPASS\tAC=29,433,31;AF=0.00579073,0.0864617,0.0061901;AFR_AF=0.0091,0.121,0.0038;AMR_AF=0.0029,0.049,0.0043;AN=5008;CS=DUP_gs;EAS_AF=0.0079,0.0665,0.003;END=47395064;EUR_AF=0.005,0.0746,0.004;NS=2504;SAS_AF=0.002,0.0992,0.0164;SITEPOST=0.9857;SVTYPE=CNV\tGT\t2|0\n10\t47531022\tDUP_gs_CNV_10_47531022_47599037\tA\t<CN0>,<CN2>,<CN3>\t.\tPASS\tAC=63,150,11;AF=0.0125799,0.0299521,0.00219649;AFR_AF=0.0303,0.0393,0.003;AMR_AF=0.0086,0.0288,0.0029;AN=5008;CS=DUP_gs;EAS_AF=0.001,0.0159,0.001;END=47599037;EUR_AF=0.0089,0.0408,0.003;NS=2504;SAS_AF=0.0072,0.0215,0.001;SITEPOST=0.9999;SVTYPE=CNV\tGT\t2|0\n10\t47596038\tDUP_gs_CNV_10_47596038_47634490\tG\t<CN0>,<CN2>,<CN3>\t.\tPASS\tAC=63,154,10;AF=0.0125799,0.0307508,0.00199681;AFR_AF=0.0303,0.0378,0.003;AMR_AF=0.0086,0.0317,0.0014;AN=5008;CS=DUP_gs;EAS_AF=0.001,0.0169,0.001;END=47634490;EUR_AF=0.0089,0.0408,0.003;NS=2504;SAS_AF=0.0072,0.0245,0.001;SITEPOST=1;SVTYPE=CNV\tGT\t2|0\n10\t47645964\tDUP_gs_CNV_10_47645964_47697149\tT\t<CN0>,<CN2>,<CN3>\t.\tPASS\tAC=9,139,8;AF=0.00179712,0.0277556,0.00159744;AFR_AF=0.0045,0.0295,0.0023;AMR_AF=0,0.0288,0.0029;AN=5008;CS=DUP_gs;EAS_AF=0,0.0119,0.001;END=47697149;EUR_AF=0.002,0.0437,0.001;NS=2504;SAS_AF=0.001,0.0245,0.001;SITEPOST=0.9992;SVTYPE=CNV\tGT\t0|2\n10\t47894775\tDUP_uwash_chr10_47894775_47999751\tT\t<CN2>,<CN3>,<CN4>\t.\tPASS\tAC=4962,43,2;AF=0.990815,0.00858626,0.00039936;AFR_AF=0.969,0.0287,0.0015;AMR_AF=0.9957,0.0043,0;AN=5008;CS=DUP_uwash;EAS_AF=1,0,0;END=47999751;EUR_AF=0.999,0.001,0;NS=2504;SAS_AF=0.999,0.001,0;SITEPOST=1;SVTYPE=CNV\tGT\t1|1\n10\t48419952\tALU_umary_ALU_7936\tT\t<INS:ME:ALU>\t.\t.\tAC=1457;AF=0.290935;AFR_AF=0.031;AMR_AF=0.415;AN=5008;CS=ALU_umary;EAS_AF=0.3879;EUR_AF=0.4264;MEINFO=AluYa4_3,1,278,-;NS=2504;SAS_AF=0.3149;SITEPOST=1;SVLEN=277;SVTYPE=ALU;TSD=ATAAAATTT\tGT\t1|1\n10\t48751829\tDUP_uwash_chr10_48751828_48880554\tC\t<CN2>,<CN3>\t.\tPASS\tAC=4860,105;AF=0.970447,0.0209664;AFR_AF=0.9834,0.0129;AMR_AF=0.9741,0.013;AN=5008;CS=DUP_uwash;EAS_AF=0.997,0.002;END=48880554;EUR_AF=0.9364,0.0437;NS=2504;SAS_AF=0.9581,0.0337;SITEPOST=1;SVTYPE=CNV\tGT\t1|2\n10\t49289919\tDUP_uwash_chr10_49289919_49390675\tG\t<CN2>,<CN3>\t.\tPASS\tAC=4858,108;AF=0.970048,0.0215655;AFR_AF=0.9834,0.0129;AMR_AF=0.9741,0.013;AN=5008;CS=DUP_uwash;EAS_AF=0.996,0.003;END=49390675;EUR_AF=0.9364,0.0447;NS=2504;SAS_AF=0.9571,0.0348;SITEPOST=1;SVTYPE=CNV\tGT\t1|2\n10\t49917156\tDEL_pindel_30939\tTAAGAGCACACATCTGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGCGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCCGACCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAA\tT\t.\tPASS\tAC=3395;AF=0.677915;AFR_AF=0.643;AMR_AF=0.683;AN=5008;CS=DEL_pindel;EAS_AF=0.7143;END=49917479;EUR_AF=0.6769;MEINFO=AluYb6_2,1,281,+;NS=2504;SAS_AF=0.6851;SITEPOST=0.9557;SVTYPE=DEL_ALU\tGT\t1|0\n10\t50278015\tDEL_pindel_30953\tCGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAAATCAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCATGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAGAAATATG\tC\t.\tPASS\tAC=1645;AF=0.328474;AFR_AF=0.4614;AMR_AF=0.3559;AN=5008;CS=DEL_pindel;EAS_AF=0.2679;END=50278332;EUR_AF=0.2525;MEINFO=AluYa5,1,281,+;NS=2504;SAS_AF=0.2699;SITEPOST=0.9997;SVTYPE=DEL_ALU\tGT\t1|1\n10\t51003249\tYL_CN_ITU_2393\tT\t<CN0>\t100\tPASS\tAC=157;AF=0.0313498;AFR_AF=0.0053;AMR_AF=0.0562;AN=5008;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0;END=51011181;EUR_AF=0.0875;MC=BI_GS_DEL1_B3_P1739_2,EM_DL_DEL10671,UW_VH_2237,SI_BD_10591;NS=2504;SAS_AF=0.0235;SVTYPE=DEL\tGT\t0|1\n10\t51300882\tDUP_uwash_chr10_51300882_51397654\tC\t<CN2>,<CN3>\t.\tPASS\tAC=4985,23;AF=0.995407,0.00459265;AFR_AF=0.9841,0.0159;AMR_AF=0.9971,0.0029;AN=5008;CS=DUP_uwash;EAS_AF=1,0;END=51397654;EUR_AF=1,0;NS=2504;SAS_AF=1,0;SITEPOST=1;SVTYPE=CNV\tGT\t1|1\n10\t51600129\tDUP_uwash_chr10_51600129_51694240\tT\t<CN2>,<CN3>\t.\tPASS\tAC=4983,23;AF=0.995008,0.00459265;AFR_AF=0.9834,0.0159;AMR_AF=0.9957,0.0029;AN=5008;CS=DUP_uwash;EAS_AF=1,0;END=51694240;EUR_AF=1,0;NS=2504;SAS_AF=1,0;SITEPOST=1;SVTYPE=CNV\tGT\t1|1\n10\t54466942\tALU_umary_ALU_7961\tC\t<INS:ME:ALU>\t.\t.\tAC=1715;AF=0.342452;AFR_AF=0.1415;AMR_AF=0.4222;AN=5008;CS=ALU_umary;EAS_AF=0.4415;EUR_AF=0.4115;MEINFO=AluUndef,1,281,+;NS=2504;SAS_AF=0.3845;SITEPOST=1;SVLEN=280;SVTYPE=ALU;TSD=AAAAGTGTCCTTTC\tGT\t1|1\n10\t54805970\tALU_umary_ALU_7967\tT\t<INS:ME:ALU>\t.\t.\tAC=1642;AF=0.327875;AFR_AF=0.1929;AMR_AF=0.3458;AN=5008;CS=ALU_umary;EAS_AF=0.4623;EUR_AF=0.3917;MEINFO=AluUndef,1,274,-;NS=2504;SAS_AF=0.2935;SITEPOST=1;SVLEN=273;SVTYPE=ALU;TSD=CACTTTCAAGAATTT\tGT\t0|1\n10\t54860810\tDEL_pindel_31011\tACCCGATTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCACGCCCGGC\tA\t.\tPASS\tAC=3414;AF=0.681709;AFR_AF=0.7617;AMR_AF=0.6268;AN=5008;CS=DEL_pindel;EAS_AF=0.5823;END=54861129;EUR_AF=0.7227;MEINFO=AluYa5,2,281,-;NS=2504;SAS_AF=0.6728;SITEPOST=0.9811;SVTYPE=DEL_ALU\tGT\t1|0\n10\t55983295\tALU_umary_ALU_7970\tT\t<INS:ME:ALU>\t.\t.\tAC=979;AF=0.195487;AFR_AF=0.1407;AMR_AF=0.245;AN=5008;CS=ALU_umary;EAS_AF=0.0754;EUR_AF=0.3479;MEINFO=AluUndef,1,281,-;NS=2504;SAS_AF=0.2014;SITEPOST=1;SVLEN=280;SVTYPE=ALU;TSD=ACTTTTCCTTCTTTT\tGT\t1|0\n10\t56664659\tALU_umary_ALU_7975\tG\t<INS:ME:ALU>\t.\t.\tAC=493;AF=0.0984425;AFR_AF=0.0038;AMR_AF=0.1628;AN=5008;CS=ALU_umary;EAS_AF=0.1776;EUR_AF=0.1054;MEINFO=AluYa5,1,281,-;NS=2504;SAS_AF=0.092;SITEPOST=1;SVLEN=280;SVTYPE=ALU;TSD=AAAAAAAACAAAAAGG\tGT\t1|0\n10\t57702025\tDEL_pindel_31064\tTGACTTATTCTAATTTCATGGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCCGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC\tT\t.\tPASS\tAC=2133;AF=0.425919;AFR_AF=0.3026;AMR_AF=0.451;AN=5008;CS=DEL_pindel;EAS_AF=0.5437;END=57702365;EUR_AF=0.4493;MEINFO=AluYa5,1,281,-;NS=2504;SAS_AF=0.4294;SITEPOST=0.9957;SVTYPE=DEL_ALU\tGT\t1|0\n10\t57974632\tALU_umary_ALU_7984\tT\t<INS:ME:ALU>\t.\t.\tAC=2108;AF=0.420927;AFR_AF=0.4652;AMR_AF=0.4251;AN=5008;CS=ALU_umary;EAS_AF=0.4018;EUR_AF=0.4374;MEINFO=AluYa5b2,1,281,+;NS=2504;SAS_AF=0.3609;SITEPOST=1;SVLEN=280;SVTYPE=ALU;TSD=AATAAGAATTTTTTT\tGT\t0|1\n10\t59256852\tYL_CN_TSI_2347\tG\t<CN0>\t100\tPASS\tAC=4198;AF=0.838259;AFR_AF=0.7496;AMR_AF=0.7608;AN=5008;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0.996;END=59258100;EUR_AF=0.8012;NS=2504;SAS_AF=0.8885;SVTYPE=DEL\tGT\t0|1\n10\t60984921\tALU_umary_ALU_8005\tG\t<INS:ME:ALU>\t.\t.\tAC=2238;AF=0.446885;AFR_AF=0.2693;AMR_AF=0.5187;AN=5008;CS=ALU_umary;EAS_AF=0.5516;EUR_AF=0.5328;MEINFO=AluYa4_2,3,281,+;NS=2504;SAS_AF=0.4397;SITEPOST=1;SVLEN=278;SVTYPE=ALU;TSD=AAGAAATGAAAATAGAGG\tGT\t1|1\n10\t61365481\tDEL_pindel_31133\tGTCATCCAAGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGCGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCTACCACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC\tG\t.\tPASS\tAC=3494;AF=0.697684;AFR_AF=0.6755;AMR_AF=0.6888;AN=5008;CS=DEL_pindel;EAS_AF=0.7133;END=61365800;EUR_AF=0.7237;MEINFO=AluYc1,1,281,-;NS=2504;SAS_AF=0.6912;SITEPOST=0.9303;SVTYPE=DEL_ALU\tGT\t1|1\n10\t62124858\tALU_umary_ALU_8012\tT\t<INS:ME:ALU>\t.\t.\tAC=1586;AF=0.316693;AFR_AF=0.205;AMR_AF=0.2536;AN=5008;CS=ALU_umary;EAS_AF=0.3065;EUR_AF=0.4026;MEINFO=AluUndef,25,266,+;NS=2504;SAS_AF=0.4346;SITEPOST=1;SVLEN=241;SVTYPE=ALU;TSD=AAAAAATAGATGCT\tGT\t0|1\n10\t63743614\tDEL_pindel_31169\tCCCCCTTTTGTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCCGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCG\tC\t.\tPASS\tAC=2300;AF=0.459265;AFR_AF=0.444;AMR_AF=0.415;AN=5008;CS=DEL_pindel;EAS_AF=0.5179;END=63743792;EUR_AF=0.5089;MEINFO=AluYb,154,281,-;NS=2504;SAS_AF=0.3998;SITEPOST=0.9991;SVTYPE=DEL_ALU\tGT\t0|1\n10\t65509251\tBI_GS_DEL1_B1_P1753_367\tT\t<CN0>\t100\tPASS\tAC=754;AF=0.150559;AFR_AF=0.2171;AMR_AF=0.1758;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.005;END=65511405;EUR_AF=0.2266;MC=SI_BD_10671,UW_VH_849,YL_CN_TSI_2351,EM_DL_DEL11215,YL_CN_GIH_1926;NS=2504;SAS_AF=0.1145;SVTYPE=DEL\tGT\t1|0\n10\t66837069\tALU_umary_ALU_8032\tT\t<INS:ME:ALU>\t.\t.\tAC=1969;AF=0.393171;AFR_AF=0.3691;AMR_AF=0.3069;AN=5008;CS=ALU_umary;EAS_AF=0.4534;EUR_AF=0.3678;MEINFO=AluYa5,1,266,-;NS=2504;SAS_AF=0.4509;SITEPOST=1;SVLEN=265;SVTYPE=ALU;TSD=TCAATGAGTTTTTTT\tGT\t1|1\n10\t67306908\tBI_GS_DEL1_B4_P1755_54\tG\t<CN0>\t100\tPASS\tAC=1151;AF=0.229832;AFR_AF=0.0151;AMR_AF=0.3156;AN=5008;CIEND=0,1;CIPOS=0,1;CS=DEL_union;EAS_AF=0.3829;END=67315294;EUR_AF=0.3012;MC=UW_VH_11605,UW_VH_4980,EM_DL_DEL11438,UW_VH_2323,UW_VH_10998,UW_VH_14447,UW_VH_18168,UW_VH_4746,YL_CN_ACB_2773,UW_VH_3866;NS=2504;SAS_AF=0.228;SVTYPE=DEL\tGT\t1|1\n10\t68336769\tALU_umary_ALU_8051\tT\t<INS:ME:ALU>\t.\t.\tAC=936;AF=0.186901;AFR_AF=0.1301;AMR_AF=0.2392;AN=5008;CS=ALU_umary;EAS_AF=0.0605;EUR_AF=0.3539;MEINFO=AluUndef,1,255,-;NS=2504;SAS_AF=0.1851;SITEPOST=1;SVLEN=254;SVTYPE=ALU;TSD=CTTAACTTTTT\tGT\t0|1\n10\t70234960\tSVA_umary_SVA_450\tT\t<INS:ME:SVA>\t.\t.\tAC=317;AF=0.0632987;AFR_AF=0.0091;AMR_AF=0.0908;AN=5008;CS=SVA_umary;EAS_AF=0.0754;EUR_AF=0.0507;MEINFO=SVA,384,1611,-;NS=2504;SAS_AF=0.1176;SITEPOST=1;SVLEN=1227;SVTYPE=SVA;TSD=TTTTTGTTTGTTT\tGT\t0|1\n10\t70272096\tDEL_pindel_31296\tTAAAGATAAATGATATTGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCAACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAA\tT\t.\tPASS\tAC=1158;AF=0.23123;AFR_AF=0.3011;AMR_AF=0.2046;AN=5008;CS=DEL_pindel;EAS_AF=0.12;END=70272418;EUR_AF=0.164;MEINFO=AluYa5,1,281,+;NS=2504;SAS_AF=0.3395;SITEPOST=0.9995;SVTYPE=DEL_ALU\tGT\t1|0\n10\t71314957\tDEL_pindel_31318\tATATATATACATATATGTGTATATATATATATATGTATATATGTATATATATATGTATATATGTATATATATATATGTATATATGTATATATATATATGTGTATATATG\tA\t.\tPASS\tAC=3210;AF=0.640974;AFR_AF=0.5787;AMR_AF=0.6441;AN=5008;CS=DEL_pindel;EAS_AF=0.6577;END=71315065;EUR_AF=0.6511;NS=2504;SAS_AF=0.6953;SITEPOST=0.9129;SVTYPE=DEL\tGT\t1|1\n10\t73256581\tDEL_pindel_31354\tGGTGTACAGATGGACAGTTGGGATGTCAAAAGGGCTACAGGTGATTCTAAGCTGCAGCCAGGGCTGAAATGACCCTTTGTTGCACTGGGACAGAGGCCCAAGACGGAAGGGATGCCCCGGA\tG\t.\tPASS\tAC=2497;AF=0.498602;AFR_AF=0.4849;AMR_AF=0.4222;AN=5008;CS=DEL_pindel;EAS_AF=0.5526;END=73256701;EUR_AF=0.6402;NS=2504;SAS_AF=0.3701;SITEPOST=0.9999;SVTYPE=DEL\tGT\t1|0\n10\t78255575\tBI_GS_DEL1_B2_P1766_196\tC\t<CN0>\t100\tPASS\tAC=2669;AF=0.532947;AFR_AF=0.3676;AMR_AF=0.6153;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.4226;END=78261021;EUR_AF=0.8072;MC=EM_DL_DEL11733,YL_CN_JPT_2630,SI_BD_10751,UW_VH_4267;NS=2504;SAS_AF=0.5297;SVTYPE=DEL\tGT\t1|1\n10\t78800902\tDEL_pindel_31433\tGCTAATTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGCGATCTCGGCTCACTGCAAGCTCCGCCTCCCAGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCTACCACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC\tG\t.\tPASS\tAC=3081;AF=0.615216;AFR_AF=0.6172;AMR_AF=0.647;AN=5008;CS=DEL_pindel;EAS_AF=0.5655;END=78801221;EUR_AF=0.6511;MEINFO=AluYc1,1,281,-;NS=2504;SAS_AF=0.6043;SITEPOST=0.9566;SVTYPE=DEL_ALU\tGT\t1|0\n10\t81188158\tDEL_pindel_31473\tTGCAAGATAAATTTCAGTTTTGCAAGATAAATTTCAGTTTTGCAAGATAAATTTCAGTTTTGCAAGATAAATTTCAG\tT\t.\tPASS\tAC=279;AF=0.0557109;AFR_AF=0.0666;AMR_AF=0.0533;AN=5008;CS=DEL_pindel;EAS_AF=0.0069;END=81188234;EUR_AF=0.1193;NS=2504;SAS_AF=0.0276;SITEPOST=0.9914;SVTYPE=DEL\tGT\t0|1\n10\t82904660\tBI_GS_DEL1_B3_P1770_31\tA\t<CN0>\t100\tPASS\tAC=2572;AF=0.513578;AFR_AF=0.4259;AMR_AF=0.5821;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.3472;END=82904914;EUR_AF=0.7326;MC=UW_VH_852;NS=2504;SAS_AF=0.5297;SVTYPE=DEL\tGT\t0|1\n10\t84237972\tDEL_pindel_31516\tTTGGCTTGTGTCACTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTAATTTATTTTTTTATTGATAATTCTTGGGTGTTTCTCACAGAGGGGGATTTGGCAGGGTCATGGGACAATAGTGGAGGGAAGGTCAGCAGATAAACAAGTGAACAAAGGTCTCTGGTTTTCCTAGGCAGAGGACCCTGCGGCCTTCCGCAGTGTTTGTGTCCCTGATTACTTGAGATTAGGGATTGGTGATGACTCTTAACGAGCATGCTGCCTTCAAGCATCTGTTTAACAAAGCACATCTTGCACCGCCCTTAATCCATTTAACCCTGAGTGGACACAGCACATGTTTCAGAGAGCACAGGGTTGGGGGTAAGGTCACAGATCAACAGGATCCCAAGGCAGAGGAATTTTTCTTAGTGCAGAACAAAATGAAAAGTCTCCCATGTCTACTTCTTTCTACACAGACACGGCAACCATCGGAAAGGTGGGGAAAAGATTGAGAAATCCGA\tT\t.\tPASS\tAC=2304;AF=0.460064;AFR_AF=0.3185;AMR_AF=0.4914;AN=5008;CS=DEL_pindel;EAS_AF=0.4544;END=84238465;EUR_AF=0.5288;MEINFO=SVA_F,1222,1627,-;NS=2504;SAS_AF=0.5644;SITEPOST=0.9948;SVTYPE=DEL_SVA\tGT\t0|1\n10\t84400756\tDEL_pindel_31521\tTCAGTCTGTCGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAG\tT\t.\tPASS\tAC=3585;AF=0.715855;AFR_AF=0.7572;AMR_AF=0.6599;AN=5008;CS=DEL_pindel;EAS_AF=0.7312;END=84400905;EUR_AF=0.7038;MEINFO=AluY,181,281,-;NS=2504;SAS_AF=0.6963;SITEPOST=0.9674;SVTYPE=DEL_ALU\tGT\t1|0\n10\t85522725\tUW_VH_2400\tT\t<CN0>\t100\tPASS\tAC=397;AF=0.0792732;AFR_AF=0.0166;AMR_AF=0.0533;AN=5008;CIEND=0,388;CIPOS=-572,0;CS=DEL_union;EAS_AF=0.1121;END=85523932;EUR_AF=0.0924;MC=BI_GS_DEL1_B2_P1773_356;NS=2504;SAS_AF=0.135;SVTYPE=DEL\tGT\t0|1\n10\t85626217\tDEL_pindel_31536\tTAAAAGAGACCTTGGGCGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCCGGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA\tT\t.\tPASS\tAC=3197;AF=0.638379;AFR_AF=0.674;AMR_AF=0.6427;AN=5008;CS=DEL_pindel;EAS_AF=0.6825;END=85626424;EUR_AF=0.5437;MEINFO=AluY,129,281,+;NS=2504;SAS_AF=0.6391;SITEPOST=0.9875;SVTYPE=DEL_ALU\tGT\t1|1\n10\t88666175\tDEL_pindel_31583\tTTAAAACACTTTGTCCTTTTGGCTGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGCCAGGAGATCGAGACCATACTGGCTAACATGGTGAAACTCCGTCTCTACCAAAAATACAAAAAAAGAAATTAGCCAGGCGTGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGGATGGCGTGAATCCGGGAGGCGGAGCTTGCAGTGAGCCGACATCGCGCCACTGCACTCCAGCCTGGGCGACAGAGTGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA\tT\t.\tPASS\tAC=2238;AF=0.446885;AFR_AF=0.5522;AMR_AF=0.3386;AN=5008;CS=DEL_pindel;EAS_AF=0.5575;END=88666515;EUR_AF=0.3221;MEINFO=AluY,1,281,+;NS=2504;SAS_AF=0.3957;SITEPOST=0.9908;SVTYPE=DEL_ALU\tGT\t0|1\n10\t89079429\tDUP_gs_CNV_10_89079429_89114090\tT\t<CN0>,<CN2>\t.\tPASS\tAC=207,146;AF=0.0413339,0.0291534;AFR_AF=0.0363,0.034;AMR_AF=0.0245,0.0173;AN=5008;CS=DUP_gs;EAS_AF=0.0188,0.0228;END=89114090;EUR_AF=0.0517,0.0199;NS=2504;SAS_AF=0.0726,0.047;SITEPOST=1;SVTYPE=CNV\tGT\t2|0\n10\t91547384\tDEL_pindel_31634\tTATGAGTAAGTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGTCC\tT\t.\tPASS\tAC=3711;AF=0.741014;AFR_AF=0.767;AMR_AF=0.7176;AN=5008;CS=DEL_pindel;EAS_AF=0.7192;END=91547720;EUR_AF=0.7256;MEINFO=AluYa5,1,281,-;NS=2504;SAS_AF=0.7607;SITEPOST=0.91845;SVTYPE=DEL_ALU\tGT\t0|1\n10\t91809911\tDEL_pindel_31641\tTAAAAATTTTTTTTGGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATTGAGACCATCCCGGCTAAAACGGTGAAACCCCATCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCATGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCTGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAA\tT\t.\tPASS\tAC=1328;AF=0.265176;AFR_AF=0.3215;AMR_AF=0.2882;AN=5008;CS=DEL_pindel;EAS_AF=0.2331;END=91810221;EUR_AF=0.1581;MEINFO=AluYa5,1,281,+;NS=2504;SAS_AF=0.316;SITEPOST=0.9997;SVTYPE=DEL_ALU\tGT\t0|1\n10\t92969225\tDEL_pindel_31659\tAAAAGGAGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGCGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCCGACCTGGGCAACAGAGCGAGACTCCGTCTCGAAGAAAAAAAAAGAAAAAAAAAAAAAAAAAAAGAAAAACGAAG\tA\t.\tPASS\tAC=4021;AF=0.802915;AFR_AF=0.8389;AMR_AF=0.7911;AN=5008;CS=DEL_pindel;EAS_AF=0.7857;END=92969563;EUR_AF=0.7823;MEINFO=AluYb6_2,1,281,+;NS=2504;SAS_AF=0.8016;SITEPOST=0.9735;SVTYPE=DEL_ALU\tGT\t1|1\n10\t93633333\tBI_GS_DEL1_B1_P1781_567\tT\t<CN0>\t100\tPASS\tAC=3024;AF=0.603834;AFR_AF=0.4902;AMR_AF=0.5562;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.748;END=93634563;EUR_AF=0.497;MC=SI_BD_10837,EM_DL_DEL10132067,YL_CN_CEU_3124,UW_VH_857,YL_CN_STU_2455;NS=2504;SAS_AF=0.7526;SVTYPE=DEL\tGT\t1|1\n10\t94134432\tYL_CN_ACB_2804\tC\t<CN0>\t100\tPASS\tAC=3877;AF=0.774161;AFR_AF=0.6989;AMR_AF=0.817;AN=5008;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0.8313;END=94137766;EUR_AF=0.8072;NS=2504;SAS_AF=0.7526;SVTYPE=DEL\tGT\t0|1\n10\t95545481\tUW_VH_1955\tA\t<CN0>\t100\tPASS\tAC=3789;AF=0.756589;AFR_AF=0.2988;AMR_AF=0.9107;AN=5008;CIEND=0,425;CIPOS=-544,0;CS=DEL_union;EAS_AF=0.9137;END=95546492;EUR_AF=0.9384;MC=BI_GS_DEL1_B1_P1783_500,UW_VH_21039,SI_BD_10850,UW_VH_4927,EM_DL_DEL10132642;NS=2504;SAS_AF=0.9172;SVTYPE=DEL\tGT\t1|1\n10\t96251541\tDEL_pindel_31719\tTTCAAAGAACCCTTATTTTATTAGTAATGCCCCCAAAGCTTAAGAGTAGTGGTGCTGACAATTCAGATATGCCAAAGAGAAGCTGTAAAGTTCCTCCTTTAAGCAAAAAGGTGAAAGTTCTCAAATTAATAAGAAAAAAAAATCATATGCTGAAGTTGCTAAGATCTGTGGTAAGAA\tT\t.\tPASS\tAC=933;AF=0.186302;AFR_AF=0.0469;AMR_AF=0.1556;AN=5008;CS=DEL_pindel;EAS_AF=0.3978;END=96251717;EUR_AF=0.1849;NS=2504;SAS_AF=0.18;SITEPOST=1;SVTYPE=DEL\tGT\t0|1\n10\t99034741\tSI_BD_10860\tC\t<CN0>\t100\tPASS\tAC=4355;AF=0.869609;AFR_AF=0.7481;AMR_AF=0.9366;AN=5008;CIEND=-50,220;CIPOS=-220,127;CS=DEL_union;EAS_AF=0.9583;END=99037238;EUR_AF=0.8857;MC=UW_VH_3682;NS=2504;SAS_AF=0.8783;SVTYPE=DEL\tGT\t1|1\n10\t100025125\tBI_GS_DEL1_B5_P1788_39\tG\t<CN0>\t100\tPASS\tAC=1349;AF=0.269369;AFR_AF=0.2829;AMR_AF=0.2133;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.2153;END=100025464;EUR_AF=0.3201;NS=2504;SAS_AF=0.2945;SVTYPE=DEL\tGT\t0|1\n10\t103394011\tBI_GS_DEL1_B5_P1791_417\tC\t<CN0>\t100\tPASS\tAC=339;AF=0.0676917;AFR_AF=0.1437;AMR_AF=0.0418;AN=5008;CIEND=0,1;CIPOS=0,1;CS=DEL_union;EAS_AF=0.004;END=103395092;EUR_AF=0.0795;MC=SI_BD_10877,UW_VH_2894,EM_DL_DEL10135415;NS=2504;SAS_AF=0.0368;SVTYPE=DEL\tGT\t1|0\n10\t105817214\tALU_umary_ALU_8203\tC\t<INS:ME:ALU>\t.\t.\tAC=2197;AF=0.438698;AFR_AF=0.3192;AMR_AF=0.4827;AN=5008;CS=ALU_umary;EAS_AF=0.4435;EUR_AF=0.498;MEINFO=AluUndef,105,280,+;NS=2504;SAS_AF=0.5031;SITEPOST=1;SVLEN=175;SVTYPE=ALU;TSD=AAAAGATTGCCTCCTTC\tGT\t1|1\n10\t106566893\tALU_umary_ALU_8208\tT\t<INS:ME:ALU>\t.\t.\tAC=404;AF=0.0806709;AFR_AF=0.0408;AMR_AF=0.1023;AN=5008;CS=ALU_umary;EAS_AF=0;EUR_AF=0.1779;MEINFO=AluUndef,1,281,-;NS=2504;SAS_AF=0.1022;SITEPOST=1;SVLEN=280;SVTYPE=ALU;TSD=GGACTGTTGCTTTT\tGT\t1|1\n10\t107252997\tBI_GS_DEL1_B3_P1795_12\tT\t<CN0>\t100\tPASS\tAC=3044;AF=0.607827;AFR_AF=0.4206;AMR_AF=0.6383;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.8958;END=107253348;EUR_AF=0.659;MC=UW_VH_862,DEL_pindel_31934;NS=2504;SAS_AF=0.4898;SVTYPE=DEL\tGT\t1|1\n10\t107891561\tALU_umary_ALU_8215\tT\t<INS:ME:ALU>\t.\t.\tAC=2924;AF=0.583866;AFR_AF=0.4493;AMR_AF=0.621;AN=5008;CS=ALU_umary;EAS_AF=0.6349;EUR_AF=0.661;MEINFO=AluYc1,14,281,-;NS=2504;SAS_AF=0.6074;SITEPOST=1;SVLEN=267;SVTYPE=ALU;TSD=GGAGCACACGTTTTT\tGT\t1|1\n10\t107950652\tUW_VH_863\tG\t<CN0>\t100\tPASS\tAC=3257;AF=0.650359;AFR_AF=0.1982;AMR_AF=0.7781;AN=5008;CIEND=0,592;CIPOS=-468,0;CS=DEL_union;EAS_AF=0.8492;END=107951600;EUR_AF=0.828;MC=EM_DL_DEL10137398,DEL_pindel_31954,YL_CN_STU_2469,SI_BD_10898;NS=2504;SAS_AF=0.7832;SVTYPE=DEL\tGT\t1|1\n10\t108991284\tALU_umary_ALU_8222\tT\t<INS:ME:ALU>\t.\t.\tAC=2554;AF=0.509984;AFR_AF=0.4221;AMR_AF=0.5043;AN=5008;CS=ALU_umary;EAS_AF=0.5635;EUR_AF=0.5149;MEINFO=AluYa5,1,277,-;NS=2504;SAS_AF=0.5726;SITEPOST=1;SVLEN=276;SVTYPE=ALU;TSD=GCATATTACACATTTT\tGT\t0|1\n10\t112177753\tL1_umary_LINE1_2023\tT\t<INS:ME:LINE1>\t.\t.\tAC=1583;AF=0.316094;AFR_AF=0.3964;AMR_AF=0.2666;AN=5008;CS=L1_umary;EAS_AF=0.374;EUR_AF=0.2525;MEINFO=LINE1,5219,5839,-;NS=2504;SAS_AF=0.2485;SITEPOST=1;SVLEN=620;SVTYPE=LINE1;TSD=null\tGT\t1|0\n10\t114073874\tALU_umary_ALU_8239\tG\t<INS:ME:ALU>\t.\t.\tAC=1886;AF=0.376597;AFR_AF=0.205;AMR_AF=0.3689;AN=5008;CS=ALU_umary;EAS_AF=0.4812;EUR_AF=0.4254;MEINFO=AluUndef,1,281,-;NS=2504;SAS_AF=0.456;SITEPOST=1;SVLEN=280;SVTYPE=ALU;TSD=AAACAGAAATAAAATATTGAGTTTCTG\tGT\t1|1\n10\t114112179\tBI_GS_DEL1_B2_P1802_90\tC\t<CN0>\t100\tPASS\tAC=2247;AF=0.448682;AFR_AF=0.2829;AMR_AF=0.4006;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.6429;END=114116659;EUR_AF=0.4095;MC=UW_VH_19467,UW_VH_5737,UW_VH_7188,YL_CN_CLM_2158,UW_VH_2156,UW_VH_21091,UW_VH_3030,UW_VH_13735,EM_DL_DEL12578,UW_VH_7819,UW_VH_14453,UW_VH_21129,UW_VH_1952,SI_BD_10926;NS=2504;SAS_AF=0.547;SVTYPE=DEL\tGT\t1|1\n10\t114157784\tDEL_pindel_32084\tTACAGATCCACTTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC\tT\t.\tPASS\tAC=3325;AF=0.663938;AFR_AF=0.6097;AMR_AF=0.6945;AN=5008;CS=DEL_pindel;EAS_AF=0.7073;END=114158122;EUR_AF=0.6799;MEINFO=AluYa4_5,1,281,-;NS=2504;SAS_AF=0.6544;SITEPOST=0.9739;SVTYPE=DEL_ALU\tGT\t1|1\n10\t117711613\tBI_GS_DEL1_B5_P1805_734\tA\t<CN0>\t100\tPASS\tAC=2190;AF=0.4373;AFR_AF=0.2943;AMR_AF=0.5159;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.5159;END=117711999;EUR_AF=0.5805;MC=UW_VH_867,DEL_pindel_32138;NS=2504;SAS_AF=0.3466;SVTYPE=DEL\tGT\t1|0\n10\t119219112\tDEL_pindel_32161\tTAAAACATGAGGCCAGGCGGCCGGGCCTGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGCAGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGGTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCTGCAGTCCGGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAACAAACAAACAAACAAAAAAAAAAACAA\tT\t.\tPASS\tAC=288;AF=0.057508;AFR_AF=0.0091;AMR_AF=0.1138;AN=5008;CS=DEL_pindel;EAS_AF=0.1042;END=119219450;EUR_AF=0.0368;MEINFO=AluYb6_2,1,281,+;NS=2504;SAS_AF=0.0562;SITEPOST=0.9998;SVTYPE=DEL_ALU\tGT\t1|0\n10\t119634274\tDEL_pindel_32169\tTGAATCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCCAGACTGCGGACTGCAGTGGCACAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCCAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTGTATTTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC\tT\t.\tPASS\tAC=4028;AF=0.804313;AFR_AF=0.7716;AMR_AF=0.8329;AN=5008;CS=DEL_pindel;EAS_AF=0.8304;END=119634605;EUR_AF=0.7903;MEINFO=AluYb9,1,281,-;NS=2504;SAS_AF=0.816;SITEPOST=0.9728;SVTYPE=DEL_ALU\tGT\t1|1\n10\t121046814\tDEL_pindel_32196\tAAGGAAGGGAGGGAGAGAGGGAGGGAGGAAGGGAGAGAGGAGGAAGGGAAGG\tA\t.\tPASS\tAC=2897;AF=0.578474;AFR_AF=0.556;AMR_AF=0.585;AN=5008;CS=DEL_pindel;EAS_AF=0.6071;END=121046865;EUR_AF=0.5567;NS=2504;SAS_AF=0.5971;SITEPOST=0.9627;SVTYPE=DEL\tGT\t0|1\n10\t122226691\tSI_BD_10957\tC\t<CN0>\t100\tPASS\tAC=3669;AF=0.732628;AFR_AF=0.4228;AMR_AF=0.8444;AN=5008;CIEND=-101,331;CIPOS=-331,50;CS=DEL_union;EAS_AF=0.9117;END=122228857;EUR_AF=0.825;MC=UW_VH_870,UW_VH_18997,YL_CN_MSL_2327,YL_CN_LWK_2397,EM_DL_DEL12717;NS=2504;SAS_AF=0.7924;SVTYPE=DEL\tGT\t1|1\n10\t122701143\tBI_GS_DEL1_B5_P1810_938\tG\t<CN0>\t100\tPASS\tAC=2264;AF=0.452077;AFR_AF=0.7186;AMR_AF=0.3588;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.1498;END=122701437;EUR_AF=0.4831;NS=2504;SAS_AF=0.4376;SVTYPE=DEL\tGT\t1|0\n10\t124216824\tUW_VH_871\tA\t<CN0>\t100\tPASS\tAC=1466;AF=0.292732;AFR_AF=0.2632;AMR_AF=0.2478;AN=5008;CIEND=0,510;CIPOS=-362,0;CS=DEL_union;EAS_AF=0.4127;END=124217266;EUR_AF=0.1958;MC=BI_GS_DEL1_B5_P1812_262;NS=2504;SAS_AF=0.3405;SVTYPE=DEL\tGT\t0|1\n10\t127190584\tCINV_delly_INV00014710\tC\t<INV>\t.\tPASS\tAC=2098;AF=0.41893;AFR_AF=0.0946;AMR_AF=0.4611;AN=5008;CIEND=-217,217;CIPOS=-217,217;CS=CINV_delly;EAS_AF=0.502;END=127197225;EUR_AF=0.664;IMPRECISE;NS=2504;SAS_AF=0.4898;SVTYPE=INV\tGT\t0|1\n10\t128106472\tDEL_pindel_32332\tTAAAAATGATTACTGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAA\tT\t.\tPASS\tAC=3490;AF=0.696885;AFR_AF=0.6823;AMR_AF=0.6916;AN=5008;CS=DEL_pindel;EAS_AF=0.7222;END=128106786;EUR_AF=0.6849;MEINFO=AluYa4b,1,281,+;NS=2504;SAS_AF=0.7065;SITEPOST=0.9634;SVTYPE=DEL_ALU\tGT\t0|1\n10\t128616069\tALU_umary_ALU_8306\tC\t<INS:ME:ALU>\t.\t.\tAC=4392;AF=0.876997;AFR_AF=0.8669;AMR_AF=0.8732;AN=5008;CS=ALU_umary;EAS_AF=0.8879;EUR_AF=0.8787;MEINFO=AluUndef,36,275,+;NS=2504;SAS_AF=0.8804;SITEPOST=0.9994;SVLEN=239;SVTYPE=ALU;TSD=null\tGT\t1|1\n10\t129373595\tALU_umary_ALU_8309\tT\t<INS:ME:ALU>\t.\t.\tAC=941;AF=0.187899;AFR_AF=0.1339;AMR_AF=0.1859;AN=5008;CS=ALU_umary;EAS_AF=0.2639;EUR_AF=0.169;MEINFO=AluYa4_4,1,281,-;NS=2504;SAS_AF=0.2035;SITEPOST=1;SVLEN=280;SVTYPE=ALU;TSD=GGGAATAACCTTTT\tGT\t0|1\n10\t129565302\tDEL_pindel_32357\tTTAGTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTTGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC\tT\t.\tPASS\tAC=3848;AF=0.768371;AFR_AF=0.7557;AMR_AF=0.7421;AN=5008;CS=DEL_pindel;EAS_AF=0.8095;END=129565608;EUR_AF=0.7584;MEINFO=AluYa4_4,1,281,-;NS=2504;SAS_AF=0.772;SITEPOST=0.96835;SVTYPE=DEL_ALU\tGT\t1|1\n10\t132372179\tDEL_pindel_32404\tGCCAGGCAAGTTCTAGTTAGAAGTTTCGAGCTCTCTCAAGCAAAGATTTTCTTTGCATAGGAAACAATTTACCGGAGGAATAAAGGGTGCAGCCCTTTCCTCCCCGGACTTCTAGAGAGGAGCAGATCAGAAGACAGCGTGAAGCT\tG\t.\tPASS\tAC=1731;AF=0.345647;AFR_AF=0.1762;AMR_AF=0.3746;AN=5008;CS=DEL_pindel;EAS_AF=0.2698;END=132372324;EUR_AF=0.5934;NS=2504;SAS_AF=0.3773;SITEPOST=0.9997;SVTYPE=DEL\tGT\t1|0\n10\t132858471\tDEL_pindel_32427\tTCCTCACGCGCATTTTCTTTTTTTTTTTTTTCTTTTTTTTTTTTTTCTTTTTTTTTTTTTCTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCATTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGC\tT\t.\tPASS\tAC=2651;AF=0.529353;AFR_AF=0.6188;AMR_AF=0.5259;AN=5008;CS=DEL_pindel;EAS_AF=0.5099;END=132858820;EUR_AF=0.4901;MEINFO=AluYa5,2,281,-;NS=2504;SAS_AF=0.4714;SITEPOST=0.9941;SVTYPE=DEL_ALU\tGT\t0|1\n10\t132988697\tBI_GS_DEL1_B5_P1820_1173\tC\t<CN0>\t100\tPASS\tAC=669;AF=0.133586;AFR_AF=0.2269;AMR_AF=0.1628;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.0069;END=132991196;EUR_AF=0.1869;MC=UW_VH_2474,YL_CN_TSI_2412,YL_CN_LWK_2412,EM_DL_DEL12914;NS=2504;SAS_AF=0.0624;SVTYPE=DEL\tGT\t0|1\n10\t134136386\tDUP_uwash_chr10_134136386_134364854\tA\t<CN2>\t.\tPASS\tAC=1;AF=0.00019968;AFR_AF=0;AMR_AF=0;AN=5008;CS=DUP_uwash;EAS_AF=0;END=134364854;EUR_AF=0.001;NS=2504;SAS_AF=0;SITEPOST=1;SVTYPE=DUP\tGT\t0|1\n10\t134151810\tDUP_gs_CNV_10_134151810_134179753\tA\t<CN0>,<CN2>\t.\tPASS\tAC=0,2;AF=0,0.00039936;AFR_AF=0,0;AMR_AF=0,0.0014;AN=5008;CS=DUP_gs;EAS_AF=0,0;END=134179753;EUR_AF=0,0.001;NS=2504;SAS_AF=0,0;SITEPOST=1;SVTYPE=DUP\tGT\t0|2\n10\t134183629\tDUP_gs_CNV_10_134183629_134212401\tA\t<CN0>,<CN2>\t.\tPASS\tAC=0,1;AF=0,0.00019968;AFR_AF=0,0;AMR_AF=0,0;AN=5008;CS=DUP_gs;EAS_AF=0,0;END=134212401;EUR_AF=0,0.001;NS=2504;SAS_AF=0,0;SITEPOST=1;SVTYPE=DUP\tGT\t0|2\n10\t134217496\tDEL_pindel_32482\tTAGGACGGCATTCTCCAGGGCTCCTGCAGGACGGCATTCTCCAGGGCTCCTGC\tT\t.\tPASS\tAC=1339;AF=0.267372;AFR_AF=0.3313;AMR_AF=0.2536;AN=5008;CS=DEL_pindel;EAS_AF=0.2768;END=134217548;EUR_AF=0.2197;NS=2504;SAS_AF=0.2301;SITEPOST=0.9947;SVTYPE=DEL\tGT\t1|0\n10\t134265395\tDUP_gs_CNV_10_134265395_134300021\tA\t<CN2>\t.\tPASS\tAC=3;AF=0.00059904;AFR_AF=0.0015;AMR_AF=0;AN=5008;CS=DUP_gs;EAS_AF=0;END=134300021;EUR_AF=0.001;NS=2504;SAS_AF=0;SITEPOST=0.6237;SVTYPE=DUP\tGT\t1|0\n10\t134317241\tDUP_gs_CNV_10_134317241_134362349\tA\t<CN2>\t.\tPASS\tAC=1;AF=0.00019968;AFR_AF=0;AMR_AF=0;AN=5008;CS=DUP_gs;EAS_AF=0;END=134362349;EUR_AF=0.001;NS=2504;SAS_AF=0;SITEPOST=1;SVTYPE=DUP\tGT\t0|1\n11\t677313\tBI_GS_DEL1_B5_P1824_334\tA\t<CN0>\t100\tPASS\tAC=2639;AF=0.526957;AFR_AF=0.2927;AMR_AF=0.5317;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.7202;END=677769;EUR_AF=0.5716;NS=2504;SAS_AF=0.5951;SVTYPE=DEL\tGT\t1|1\n11\t4907963\tALU_umary_ALU_8343\tT\t<INS:ME:ALU>\t.\t.\tAC=765;AF=0.152756;AFR_AF=0.0189;AMR_AF=0.1527;AN=5008;CS=ALU_umary;EAS_AF=0.0585;EUR_AF=0.2853;MEINFO=AluUndef,61,281,-;NS=2504;SAS_AF=0.2945;SITEPOST=1;SVLEN=220;SVTYPE=ALU;TSD=AAAAGACTTTATTTTT\tGT\t1|1\n11\t4968456\tDUP_gs_CNV_11_4968456_4975835\tA\t<CN0>,<CN2>\t.\tPASS\tAC=1624,165;AF=0.324281,0.0329473;AFR_AF=0.2496,0.0983;AMR_AF=0.4798,0.0086;AN=5008;CS=DUP_gs;EAS_AF=0.3194,0.0278;END=4975835;EUR_AF=0.3907,0;MC=UW_VH_15458,YL_CN_MXL_2164,SI_BD_11158,UW_VH_2812,UW_VH_14805;NS=2504;SAS_AF=0.2515,0.001;SITEPOST=1;SVTYPE=CNV\tGT\t1|0\n11\t4972926\tEM_DL_DEL10154711\tT\t<CN0>\t100\tPASS\tAC=1561;AF=0.311701;AFR_AF=0.2126;AMR_AF=0.4755;AN=5008;CIEND=-150,150;CIPOS=-150,150;CS=DEL_union;EAS_AF=0.3095;END=4973837;EUR_AF=0.3897;NS=2504;SAS_AF=0.2515;SVTYPE=DEL\tGT\t1|0\n11\t5106964\tDEL_pindel_32701\tTAAAGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTGGTAGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCGCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAA\tT\t.\tPASS\tAC=3429;AF=0.684704;AFR_AF=0.8041;AMR_AF=0.6671;AN=5008;CS=DEL_pindel;EAS_AF=0.5565;END=5107211;EUR_AF=0.6799;MEINFO=AluYc1,58,281,+;NS=2504;SAS_AF=0.6728;SITEPOST=0.9983;SVTYPE=DEL_ALU\tGT\t0|1\n11\t5521609\tUW_VH_1531\tT\t<CN0>\t100\tPASS\tAC=429;AF=0.0856629;AFR_AF=0.0098;AMR_AF=0.1599;AN=5008;CIEND=0,403;CIPOS=-447,0;CS=DEL_union;EAS_AF=0.0744;END=5523196;EUR_AF=0.164;MC=EM_DL_DEL10154883,SI_BD_11162,YL_CN_PUR_3090,BI_GS_DEL1_B1_P1829_437,YL_CN_PEL_2285;NS=2504;SAS_AF=0.0665;SVTYPE=DEL\tGT\t1|0\n11\t5885149\tALU_umary_ALU_8351\tG\t<INS:ME:ALU>\t.\t.\tAC=1466;AF=0.292732;AFR_AF=0.2481;AMR_AF=0.33;AN=5008;CS=ALU_umary;EAS_AF=0.3056;EUR_AF=0.341;MEINFO=AluUndef,2,281,+;NS=2504;SAS_AF=0.2638;SITEPOST=1;SVLEN=279;SVTYPE=ALU;TSD=AAGAGATTGTGTG\tGT\t0|1\n11\t6881402\tBI_GS_DEL1_B1_P1830_837\tC\t<CN0>\t100\tPASS\tAC=1935;AF=0.386382;AFR_AF=0.3192;AMR_AF=0.3127;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.3631;END=6881922;EUR_AF=0.5;MC=SI_BD_11170;NS=2504;SAS_AF=0.4366;SVTYPE=DEL\tGT\t1|1\n11\t7092800\tALU_umary_ALU_8359\tT\t<INS:ME:ALU>\t.\t.\tAC=2657;AF=0.530551;AFR_AF=0.3971;AMR_AF=0.4914;AN=5008;CS=ALU_umary;EAS_AF=0.6528;EUR_AF=0.5149;MEINFO=AluYb7_2,1,281,+;NS=2504;SAS_AF=0.6288;SITEPOST=1;SVLEN=280;SVTYPE=ALU;TSD=AAGAATGCAGGT\tGT\t1|0\n11\t7428579\tDEL_pindel_32733\tTTTAAGTCTATAATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCCGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCCAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC\tT\t.\tPASS\tAC=1552;AF=0.309904;AFR_AF=0.5469;AMR_AF=0.2161;AN=5008;CS=DEL_pindel;EAS_AF=0.1925;END=7428910;EUR_AF=0.3221;MEINFO=AluYb6_2,1,281,-;NS=2504;SAS_AF=0.1646;SITEPOST=0.9987;SVTYPE=DEL_ALU\tGT\t0|1\n11\t7716903\tDEL_pindel_32740\tTAAGAATGGATGAGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTGGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGAGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAA\tT\t.\tPASS\tAC=4025;AF=0.803714;AFR_AF=0.7012;AMR_AF=0.8314;AN=5008;CS=DEL_pindel;EAS_AF=0.8214;END=7717219;EUR_AF=0.8728;MEINFO=AluYa4_3,1,281,+;NS=2504;SAS_AF=0.8333;SITEPOST=0.9799;SVTYPE=DEL_ALU\tGT\t1|1\n11\t8326057\tDEL_pindel_32752\tTAAGAATTGGTCGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCCGGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAA\tT\t.\tPASS\tAC=2158;AF=0.430911;AFR_AF=0.2829;AMR_AF=0.5548;AN=5008;CS=DEL_pindel;EAS_AF=0.4315;END=8326195;EUR_AF=0.4742;MEINFO=AluYb,171,281,+;NS=2504;SAS_AF=0.498;SITEPOST=0.9894;SVTYPE=DEL_ALU\tGT\t1|1\n11\t8839663\tSVA_umary_SVA_486\tG\t<INS:ME:SVA>\t.\t.\tAC=1299;AF=0.259385;AFR_AF=0.1392;AMR_AF=0.3271;AN=5008;CS=SVA_umary;EAS_AF=0.3065;EUR_AF=0.3588;MEINFO=SVA,39,1621,+;NS=2504;SAS_AF=0.2229;SITEPOST=1;SVLEN=1582;SVTYPE=SVA;TSD=AAAAATACACAAACTAG\tGT\t1|0\n11\t9323626\tBI_GS_DEL1_B1_P1833_272\tT\t<CN0>\t100\tPASS\tAC=2751;AF=0.549321;AFR_AF=0.5666;AMR_AF=0.5216;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.626;END=9324639;EUR_AF=0.5497;MC=EM_DL_DEL10157084,YL_CN_STU_2540,UW_VH_2157,UW_VH_3179,SI_BD_11185,UW_VH_19176;NS=2504;SAS_AF=0.4663;SVTYPE=DEL\tGT\t1|0\n11\t10292738\tBI_GS_DEL1_B3_P1834_13\tT\t<CN0>\t100\tPASS\tAC=2051;AF=0.409545;AFR_AF=0.2912;AMR_AF=0.487;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.3264;END=10293842;EUR_AF=0.5517;NS=2504;SAS_AF=0.454;SVTYPE=DEL\tGT\t1|0\n11\t11948525\tSVA_umary_SVA_488\tA\t<INS:ME:SVA>\t.\t.\tAC=369;AF=0.0736821;AFR_AF=0.0091;AMR_AF=0.1124;AN=5008;CS=SVA_umary;EAS_AF=0.0575;EUR_AF=0.1531;MEINFO=SVA,83,1627,-;NS=2504;SAS_AF=0.0685;SITEPOST=1;SVLEN=1544;SVTYPE=SVA;TSD=CAAGAGTGTGTTGTTTA\tGT\t1|0\n11\t12152544\tDEL_pindel_32801\tGAAAGATCCCAGTAGGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCATGAGGTCAGGAGATCGAGACCATTCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGCGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCACAGTCCGGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAA\tG\t.\tPASS\tAC=2437;AF=0.486621;AFR_AF=0.2761;AMR_AF=0.5692;AN=5008;CS=DEL_pindel;EAS_AF=0.506;END=12152868;EUR_AF=0.5577;MEINFO=AluYb5,1,281,+;NS=2504;SAS_AF=0.6196;SITEPOST=0.9981;SVTYPE=DEL_ALU\tGT\t0|1\n11\t12943732\tDEL_pindel_32824\tTGGTTCTCTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTTGTGATCCGCCCGCCTCGGCCTCCCAAAGTGC\tT\t.\tPASS\tAC=1860;AF=0.371406;AFR_AF=0.3865;AMR_AF=0.3804;AN=5008;CS=DEL_pindel;EAS_AF=0.3948;END=12944009;EUR_AF=0.3976;MEINFO=AluY,34,281,-;NS=2504;SAS_AF=0.2935;SITEPOST=0.9998;SVTYPE=DEL_ALU\tGT\t1|0\n11\t13092200\tALU_umary_ALU_8387\tC\t<INS:ME:ALU>\t.\t.\tAC=296;AF=0.0591054;AFR_AF=0.0242;AMR_AF=0.1297;AN=5008;CS=ALU_umary;EAS_AF=0.004;EUR_AF=0.0984;MEINFO=AluYa4_5,1,263,-;NS=2504;SAS_AF=0.0726;SITEPOST=1;SVLEN=262;SVTYPE=ALU;TSD=ATTAATGTAATTTTC\tGT\t0|1\n11\t14348310\tDEL_pindel_32841\tTAAGAATATGATTTTGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGCAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCAACAGAGCGAGACTCTGTCTCAAAAAAAAAAAAAAAAAAAA\tT\t.\tPASS\tAC=2733;AF=0.545727;AFR_AF=0.4153;AMR_AF=0.6297;AN=5008;CS=DEL_pindel;EAS_AF=0.5099;END=14348626;EUR_AF=0.6123;MEINFO=AluYa5,1,281,+;NS=2504;SAS_AF=0.6309;SITEPOST=0.9945;SVTYPE=DEL_ALU\tGT\t1|0\n11\t16587158\tDEL_pindel_32878\tTAAAGCATGGCACATGTATACATATGTAACTAACCTGCACAATGTGCACATGTACCCTAAAACTTAGAGTATAATAAAAAAATAAAAAAATAAAAAAATAAATAAATAAATAAAAAAAAAAAAAAAAAAAAAAAAAA\tT\t.\tPASS\tAC=4841;AF=0.966653;AFR_AF=0.9153;AMR_AF=0.9813;AN=5008;CS=DEL_pindel;EAS_AF=0.9881;END=16587294;EUR_AF=0.9821;MEINFO=LINE1,5945,6019,+;NS=2504;SAS_AF=0.9877;SITEPOST=1;SVTYPE=DEL_LINE1\tGT\t1|1\n11\t16597563\tDEL_pindel_32879\tTGAAAACCACAACTACGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAA\tT\t.\tPASS\tAC=3853;AF=0.769369;AFR_AF=0.7421;AMR_AF=0.7651;AN=5008;CS=DEL_pindel;EAS_AF=0.7897;END=16597886;EUR_AF=0.7843;MEINFO=AluYa5,1,281,+;NS=2504;SAS_AF=0.773;SITEPOST=0.96365;SVTYPE=DEL_ALU\tGT\t1|0\n11\t16996173\tBI_GS_DEL1_B2_P1840_657\tG\t<CN0>\t100\tPASS\tAC=3970;AF=0.792732;AFR_AF=0.7693;AMR_AF=0.8213;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.871;END=16996599;EUR_AF=0.6491;NS=2504;SAS_AF=0.8712;SVTYPE=DEL\tGT\t0|1\n11\t19963012\tALU_umary_ALU_8419\tG\t<INS:ME:ALU>\t.\t.\tAC=960;AF=0.191693;AFR_AF=0.2814;AMR_AF=0.0807;AN=5008;CS=ALU_umary;EAS_AF=0.2857;EUR_AF=0.0944;MEINFO=AluYb8,24,281,-;NS=2504;SAS_AF=0.1524;SITEPOST=1;SVLEN=257;SVTYPE=ALU;TSD=AATAAATAGCATGAGGTTG\tGT\t0|1\n11\t22412812\tALU_umary_ALU_8434\tA\t<INS:ME:ALU>\t.\t.\tAC=523;AF=0.104433;AFR_AF=0.0204;AMR_AF=0.1037;AN=5008;CS=ALU_umary;EAS_AF=0.1776;EUR_AF=0.1074;MEINFO=AluUndef,4,272,+;NS=2504;SAS_AF=0.1401;SITEPOST=1;SVLEN=268;SVTYPE=ALU;TSD=AAAAACATCTA\tGT\t0|1\n11\t22433876\tDEL_pindel_32979\tCAGACACATAGATCAATGAAACAGAATAGAAAGCCTAGAAATAAATCCACATATTTATAGTTAGTTGATTTTTTGTAAGGGTGCCAAGAACACAAAATGGGGAAAGGACAGTCTCTT\tC\t.\tPASS\tAC=621;AF=0.124002;AFR_AF=0.0265;AMR_AF=0.1225;AN=5008;CS=DEL_pindel;EAS_AF=0.2044;END=22433992;EUR_AF=0.1262;NS=2504;SAS_AF=0.1718;SITEPOST=0.9929;SVTYPE=DEL\tGT\t0|1\n11\t23012584\tDEL_pindel_32985\tGATAAAGACAGAAAGAAATCTCATCCTTTTTATACTACCAACAATGTATAATCC\tG\t.\tPASS\tAC=319;AF=0.0636981;AFR_AF=0.0265;AMR_AF=0.0937;AN=5008;CS=DEL_pindel;EAS_AF=0.0377;END=23012637;EUR_AF=0.1521;NS=2504;SAS_AF=0.0286;SITEPOST=0.9998;SVTYPE=DEL\tGT\t0|1\n11\t23313949\tDEL_pindel_32997\tCATTTATAATTACTTACATCTGTGTTTTATAGTTCACATTGTACAGATCATCTTCTTGGTTAAGTACATTCTTAGAT\tC\t.\tPASS\tAC=552;AF=0.110224;AFR_AF=0.0787;AMR_AF=0.1369;AN=5008;CS=DEL_pindel;EAS_AF=0.002;END=23314025;EUR_AF=0.1978;NS=2504;SAS_AF=0.1554;SITEPOST=0.9994;SVTYPE=DEL\tGT\t1|0\n11\t23522804\tALU_umary_ALU_8440\tT\t<INS:ME:ALU>\t.\t.\tAC=2529;AF=0.504992;AFR_AF=0.5908;AMR_AF=0.5086;AN=5008;CS=ALU_umary;EAS_AF=0.2827;EUR_AF=0.6272;MEINFO=AluUndef,2,280,+;NS=2504;SAS_AF=0.4898;SITEPOST=1;SVLEN=278;SVTYPE=ALU;TSD=AATTGTAATTCATT\tGT\t1|1\n11\t25068857\tDEL_pindel_33040\tTTAAGAATAGTATTGTTTTTATTTTTTTTATTTTTTTTTTTTTTACTTTTTAATTTTCTTTTTTTTATTTTTTTTAATTTTTTTTAATTTTTTTTTTATTATACTC\tT\t.\tPASS\tAC=1650;AF=0.329473;AFR_AF=0.3638;AMR_AF=0.3602;AN=5008;CS=DEL_pindel;EAS_AF=0.1617;END=25068962;EUR_AF=0.3857;NS=2504;SAS_AF=0.3763;SITEPOST=0.9993;SVTYPE=DEL\tGT\t1|0\n11\t25605138\tALU_umary_ALU_8456\tT\t<INS:ME:ALU>\t.\t.\tAC=1957;AF=0.390775;AFR_AF=0.0809;AMR_AF=0.4928;AN=5008;CS=ALU_umary;EAS_AF=0.5496;EUR_AF=0.492;MEINFO=AluYb8,1,278,+;NS=2504;SAS_AF=0.4693;SITEPOST=1;SVLEN=277;SVTYPE=ALU;TSD=AAAAGGAACTTAGTT\tGT\t1|1\n11\t25680026\tDEL_pindel_33049\tATTGATATGATTTAGATTATGACTTTGCATTTCATGAATTTGTCATTCCTTCCAG\tA\t.\tPASS\tAC=1989;AF=0.397165;AFR_AF=0.3873;AMR_AF=0.389;AN=5008;CS=DEL_pindel;EAS_AF=0.3958;END=25680080;EUR_AF=0.3827;NS=2504;SAS_AF=0.4325;SITEPOST=0.9977;SVTYPE=DEL\tGT\t1|0\n11\t26679948\tDEL_pindel_33081\tGTCAGGAGTTCAAGAGCAAAGAGCAACATGGAGAAACCCCGTCTCTACTAAAAATACAAAATAGCCGGGTGCAGTGGCGCATGCCTGTAATCCCAGCTAC\tG\t.\tPASS\tAC=1541;AF=0.307708;AFR_AF=0.1687;AMR_AF=0.2378;AN=5008;CS=DEL_pindel;EAS_AF=0.3492;END=26680047;EUR_AF=0.3887;NS=2504;SAS_AF=0.4192;SITEPOST=0.99795;SVTYPE=DEL\tGT\t0|1\n11\t27657262\tBI_GS_DEL1_B4_P1851_138\tA\t<CN0>\t100\tPASS\tAC=2047;AF=0.408746;AFR_AF=0.2655;AMR_AF=0.4827;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.2857;END=27657596;EUR_AF=0.7018;MC=DEL_pindel_33101;NS=2504;SAS_AF=0.3753;SVTYPE=DEL\tGT\t0|1\n11\t29007143\tUW_VH_21255\tG\t<CN0>\t100\tPASS\tAC=2607;AF=0.520567;AFR_AF=0.4402;AMR_AF=0.464;AN=5008;CIEND=0,387;CIPOS=-303,0;CS=DEL_union;EAS_AF=0.4117;END=29012766;EUR_AF=0.6551;MC=EM_DL_DEL14392,BI_GS_DEL1_B1_P1853_5,SI_BD_11287,UW_VH_888,YL_CN_TSI_2467;NS=2504;SAS_AF=0.6431;SVTYPE=DEL\tGT\t1|0\n11\t29139370\tEM_DL_DEL10165565\tA\t<CN0>\t100\tPASS\tAC=1660;AF=0.33147;AFR_AF=0.5076;AMR_AF=0.3948;AN=5008;CIEND=-150,150;CIPOS=-150,150;CS=DEL_union;EAS_AF=0.2302;END=29140327;EUR_AF=0.1958;MC=UW_VH_21064,UW_VH_11112,UW_VH_3111,BI_GS_DEL1_B4_P1853_26,UW_VH_6293,UW_VH_11356,UW_VH_23284;NS=2504;SAS_AF=0.2924;SVTYPE=DEL\tGT\t0|1\n11\t29967582\tBI_GS_DEL1_B5_P1853_1126\tC\t<CN0>\t100\tPASS\tAC=1616;AF=0.322684;AFR_AF=0.3026;AMR_AF=0.2651;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.2639;END=29968470;EUR_AF=0.3917;MC=DEL_pindel_33137,SI_BD_11288,EM_DL_DEL10165841;NS=2504;SAS_AF=0.3804;SVTYPE=DEL\tGT\t1|0\n11\t31393768\tUW_VH_889\tT\t<CN0>\t100\tPASS\tAC=997;AF=0.199081;AFR_AF=0.0688;AMR_AF=0.2723;AN=5008;CIEND=0,487;CIPOS=-383,0;CS=DEL_union;EAS_AF=0.0516;END=31397650;EUR_AF=0.3807;MC=EM_DL_DEL14433,SI_BD_11293,BI_GS_DEL1_B1_P1855_335,YL_CN_CDX_2202;NS=2504;SAS_AF=0.2883;SVTYPE=DEL\tGT\t1|0\n11\t32286640\tDEL_pindel_33181\tTAAGAAAAGGTCTTCGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGAGGTGGCGGGCGCCTGTAGTCCCAGCTTCTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCCAGGGGGCGGAGCCTGCAGTGAGCCGAGATTGCGCCACTGCACTCCAGCCTGGGCGACAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA\tT\t.\tPASS\tAC=2316;AF=0.46246;AFR_AF=0.4493;AMR_AF=0.4395;AN=5008;CS=DEL_pindel;EAS_AF=0.5813;END=32286973;EUR_AF=0.3966;MEINFO=AluYe,2,281,+;NS=2504;SAS_AF=0.4417;SITEPOST=0.999;SVTYPE=DEL_ALU\tGT\t1|0\n11\t37121329\tDEL_pindel_33248\tCCCTTCCTTCCTTCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCTTCCTTCCTT\tC\t.\tPASS\tAC=907;AF=0.18111;AFR_AF=0.0703;AMR_AF=0.2565;AN=5008;CS=DEL_pindel;EAS_AF=0.0952;END=37121391;EUR_AF=0.3479;NS=2504;SAS_AF=0.1943;SITEPOST=0.9962;SVTYPE=DEL\tGT\t0|1\n11\t37544637\tALU_umary_ALU_8518\tA\t<INS:ME:ALU>\t.\t.\tAC=487;AF=0.0972444;AFR_AF=0.0159;AMR_AF=0.0879;AN=5008;CS=ALU_umary;EAS_AF=0.0982;EUR_AF=0.1531;MEINFO=AluYa5c1,1,281,+;NS=2504;SAS_AF=0.1554;SITEPOST=1;SVLEN=280;SVTYPE=ALU;TSD=AAAAATTTTGCTAATTA\tGT\t1|0\n11\t37666630\tDEL_pindel_33257\tTAAAATGTTATACTTCTCTTTGGGAGGCCGAGGCGGGTGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGCGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCCGGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA\tT\t.\tPASS\tAC=827;AF=0.165136;AFR_AF=0.2292;AMR_AF=0.1138;AN=5008;CS=DEL_pindel;EAS_AF=0.1032;END=37666937;EUR_AF=0.1471;MEINFO=AluYb6_2,35,281,+;NS=2504;SAS_AF=0.1973;SITEPOST=0.9998;SVTYPE=DEL_ALU\tGT\t1|0\n11\t37706295\tALU_umary_ALU_8520\tC\t<INS:ME:ALU>\t.\t.\tAC=2994;AF=0.597843;AFR_AF=0.447;AMR_AF=0.5879;AN=5008;CS=ALU_umary;EAS_AF=0.6984;EUR_AF=0.6153;MEINFO=AluYa5,16,281,-;NS=2504;SAS_AF=0.6871;SITEPOST=0.9997;SVLEN=265;SVTYPE=ALU;TSD=null\tGT\t1|1\n11\t37962045\tDEL_pindel_33268\tTAAGAAAATGCTTATTAGGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGACGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACACGGTGAAACCCCGTCTCTACTAAAAATACAAAAATTAGCCGGGCATGGTGGCGCGTGCCTGTAGTCCCAGCTACACGGAAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGTCGAGATCGCGCCACTGCACTCCAGCCTGGGCGACAGAGCAAAACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAGAA\tT\t.\tPASS\tAC=712;AF=0.142173;AFR_AF=0.2723;AMR_AF=0.1455;AN=5008;CS=DEL_pindel;EAS_AF=0.0238;END=37962370;EUR_AF=0.162;MEINFO=AluYg6,1,281,+;NS=2504;SAS_AF=0.0654;SITEPOST=0.9998;SVTYPE=DEL_ALU\tGT\t1|0\n11\t38801075\tALU_umary_ALU_8526\tT\t<INS:ME:ALU>\t.\t.\tAC=2780;AF=0.555112;AFR_AF=0.5393;AMR_AF=0.5519;AN=5008;CS=ALU_umary;EAS_AF=0.5437;EUR_AF=0.5765;MEINFO=AluYa5,1,281,+;NS=2504;SAS_AF=0.5685;SITEPOST=1;SVLEN=280;SVTYPE=ALU;TSD=AGAAAGTGGTTTATT\tGT\t1|0\n11\t41007018\tDEL_pindel_33315\tATAAAGAACATTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCCGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC\tA\t.\tPASS\tAC=4077;AF=0.814097;AFR_AF=0.7632;AMR_AF=0.8098;AN=5008;CS=DEL_pindel;EAS_AF=0.8651;END=41007340;EUR_AF=0.8211;MEINFO=AluYb6_2,1,281,-;NS=2504;SAS_AF=0.8262;SITEPOST=0.9898;SVTYPE=DEL_ALU\tGT\t1|1\n11\t42464098\tDEL_pindel_33341\tTGGTTTCTCTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCCGAACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCCAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC\tT\t.\tPASS\tAC=4086;AF=0.815895;AFR_AF=0.6089;AMR_AF=0.8487;AN=5008;CS=DEL_pindel;EAS_AF=0.9633;END=42464409;EUR_AF=0.8231;MEINFO=AluYb6_2,1,281,-;NS=2504;SAS_AF=0.9131;SITEPOST=0.9979;SVTYPE=DEL_ALU\tGT\t1|0\n11\t42812829\tDUP_gs_CNV_11_42812829_42818734\tT\t<CN0>,<CN2>\t.\tPASS\tAC=1106,18;AF=0.220847,0.00359425;AFR_AF=0.2073,0.0015;AMR_AF=0.1787,0.0014;AN=5008;CS=DUP_gs;EAS_AF=0.2312,0.0099;END=42818734;EUR_AF=0.2376,0.002;MC=YL_CN_TSI_2473,SI_BD_11361,UW_VH_5057,EM_DL_DEL14683,YL_CN_STU_2566,YL_CN_ASW_2662,UW_VH_15297;NS=2504;SAS_AF=0.2413,0.0031;SITEPOST=1;SVTYPE=CNV\tGT\t0|1\n11\t43191343\tALU_umary_ALU_8557\tT\t<INS:ME:ALU>\t.\t.\tAC=1169;AF=0.233427;AFR_AF=0.2927;AMR_AF=0.2983;AN=5008;CS=ALU_umary;EAS_AF=0.1022;EUR_AF=0.2584;MEINFO=AluUndef,1,280,+;NS=2504;SAS_AF=0.2168;SITEPOST=1;SVLEN=279;SVTYPE=ALU;TSD=AAAGAATAATGTT\tGT\t1|0\n11\t43891829\tDEL_pindel_33366\tTAAAATTAGATCAGTGGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGAGTGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGCGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCCGGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA\tT\t.\tPASS\tAC=4165;AF=0.831669;AFR_AF=0.8041;AMR_AF=0.8242;AN=5008;CS=DEL_pindel;EAS_AF=0.8403;END=43892165;EUR_AF=0.839;MEINFO=AluYb6_2,1,281,+;NS=2504;SAS_AF=0.8579;SITEPOST=0.9749;SVTYPE=DEL_ALU\tGT\t1|1\n11\t43909603\tBI_GS_DEL1_B5_P1867_1112\tT\t<CN0>\t100\tPASS\tAC=2849;AF=0.56889;AFR_AF=0.4697;AMR_AF=0.4438;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.7341;END=43909911;EUR_AF=0.67;NS=2504;SAS_AF=0.5174;SVTYPE=DEL\tGT\t1|1\n11\t45429848\tBI_GS_DEL1_B1_P1869_437\tC\t<CN0>\t100\tPASS\tAC=2244;AF=0.448083;AFR_AF=0.2844;AMR_AF=0.536;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.374;END=45431615;EUR_AF=0.5199;MC=UW_VH_10237,UW_VH_898,EM_DL_DEL10173011,YL_CN_GWD_3570,YL_CN_ITU_2557,YL_CN_PJL_2680,UW_VH_24822,YL_CN_IBS_2360;NS=2504;SAS_AF=0.6094;SVTYPE=DEL\tGT\t1|0\n11\t46036235\tDEL_pindel_33407\tTAATAGTTATTCTGGGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCTGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAATAAAAATAAAAAAATAAAAAAAAATAAAAAAATAAAA\tT\t.\tPASS\tAC=2276;AF=0.454473;AFR_AF=0.5575;AMR_AF=0.3919;AN=5008;CS=DEL_pindel;EAS_AF=0.5675;END=46036582;EUR_AF=0.3201;MEINFO=AluYa4b,1,281,+;NS=2504;SAS_AF=0.3814;SITEPOST=0.9975;SVTYPE=DEL_ALU\tGT\t0|1\n11\t46161016\tBI_GS_DEL1_B5_P1870_197\tG\t<CN0>\t100\tPASS\tAC=368;AF=0.0734824;AFR_AF=0.0136;AMR_AF=0.0807;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.0218;END=46162403;EUR_AF=0.164;MC=EM_DL_DEL10173354,YL_CN_CHB_2632,UW_VH_899;NS=2504;SAS_AF=0.1094;SVTYPE=DEL\tGT\t0|1\n11\t47057588\tEM_DL_DEL14776\tA\t<CN0>\t100\tPASS\tAC=1321;AF=0.263778;AFR_AF=0.0212;AMR_AF=0.4409;AN=5008;CIEND=-150,150;CIPOS=-150,150;CS=DEL_union;EAS_AF=0.2123;END=47063700;EUR_AF=0.4463;MC=UW_VH_11606,UW_VH_3787,UW_VH_4797,UW_VH_3225,BI_GS_DEL1_B4_P1871_11,YL_CN_JPT_2795;NS=2504;SAS_AF=0.3313;SVTYPE=DEL\tGT\t1|0\n11\t47579086\tALU_umary_ALU_8565\tT\t<INS:ME:ALU>\t.\t.\tAC=1094;AF=0.21845;AFR_AF=0.2254;AMR_AF=0.2291;AN=5008;CS=ALU_umary;EAS_AF=0.2153;EUR_AF=0.2217;MEINFO=AluYa3_3,1,281,+;NS=2504;SAS_AF=0.2014;SITEPOST=1;SVLEN=280;SVTYPE=ALU;TSD=null\tGT\t0|1\n11\t48120061\tDEL_pindel_33459\tTTTTATCTCTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTTTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGCGATCTCGACTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCTGTGTAGCTGGGACTACAGGCACGCGCCACCATGCCCGGCTAATTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTGTTAGCCAGGATGGTCCCGATCTCCTGACCTCGTGATCCGCCCGTCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC\tT\t.\tPASS\tAC=3216;AF=0.642173;AFR_AF=0.4312;AMR_AF=0.7493;AN=5008;CS=DEL_pindel;EAS_AF=0.6974;END=48120370;EUR_AF=0.6998;MEINFO=AluYg6a2,1,281,-;NS=2504;SAS_AF=0.7352;SITEPOST=0.9967;SVTYPE=DEL_ALU\tGT\t1|0\n11\t48600857\tBI_GS_DEL1_B5_P1872_669\tT\t<CN0>\t100\tPASS\tAC=2240;AF=0.447284;AFR_AF=0.2617;AMR_AF=0.585;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.4395;END=48604286;EUR_AF=0.6441;MC=EM_DL_DEL14824,YL_CN_GWD_3574,YL_CN_PUR_3141;NS=2504;SAS_AF=0.4059;SVTYPE=DEL\tGT\t1|0\n11\t48680194\tDEL_pindel_33473\tGTGTGCATTCATCTCACAGTGTTAAACCTTGCATTGGATTCAGCAGTTTGGAAATACTGTTTGTGTCCATTCTTTGAAGGGTCGTTTAGGAGCTCATTGAGGAAAATGGTGAAAAAGCAGATATCCCAGGATTAAAACTAGAAGGAAGCTATCTAGGAAACTGCTTTGAGATATGTGCATTCCTCTTACAGAGTTATACATTTCTATTCATT\tG\t.\tPASS\tAC=709;AF=0.141573;AFR_AF=0.2451;AMR_AF=0.098;AN=5008;CS=DEL_pindel;EAS_AF=0.1359;END=48680405;EUR_AF=0.0895;NS=2504;SAS_AF=0.092;SITEPOST=0.9993;SVTYPE=DEL\tGT\t0|1\n11\t48714039\tBI_GS_DEL1_B3_P1872_31\tG\t<CN0>\t100\tPASS\tAC=2332;AF=0.465655;AFR_AF=0.4153;AMR_AF=0.3905;AN=5008;CIEND=0,1;CIPOS=0,1;CS=DEL_union;EAS_AF=0.5595;END=48715072;EUR_AF=0.3559;MC=YL_CN_ITU_2564,YL_CN_YRI_3293,YL_CN_GWD_3576,YL_CN_PJL_2686;NS=2504;SAS_AF=0.6033;SVTYPE=DEL\tGT\t0|1\n11\t48734744\tBI_GS_DEL1_B4_P1872_149\tC\t<CN0>\t100\tPASS\tAC=2038;AF=0.406949;AFR_AF=0.1513;AMR_AF=0.5735;AN=5008;CIEND=-1,1;CIPOS=-1,1;CS=DEL_union;EAS_AF=0.4395;END=48736963;EUR_AF=0.6093;MC=YL_CN_BEB_2200,YL_CN_ACB_2925,YL_CN_ASW_2666,YL_CN_CDX_2215;NS=2504;SAS_AF=0.3926;SVTYPE=DEL\tGT\t1|0\n11\t48880634\tYL_CN_ACB_2931\tC\t<CN0>\t100\tPASS\tAC=4870;AF=0.972444;AFR_AF=0.9047;AMR_AF=0.9957;AN=5008;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0.996;END=48881844;EUR_AF=0.998;MC=YL_CN_GBR_2535;NS=2504;SAS_AF=0.9969;SVTYPE=DEL\tGT\t1|1\n11\t48928943\tBI_GS_DEL1_B3_P1872_39\tT\t<CN0>\t100\tPASS\tAC=2184;AF=0.436102;AFR_AF=0.2292;AMR_AF=0.5836;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.4315;END=48929253;EUR_AF=0.6431;MC=DEL_pindel_33478,UW_VH_900;NS=2504;SAS_AF=0.4029;SVTYPE=DEL\tGT\t1|0\n11\t48933125\tALU_umary_ALU_8570\tT\t<INS:ME:ALU>\t.\t.\tAC=2898;AF=0.578674;AFR_AF=0.562;AMR_AF=0.562;AN=5008;CS=ALU_umary;EAS_AF=0.5853;EUR_AF=0.5964;MEINFO=AluYb6_2,1,255,-;NS=2504;SAS_AF=0.5879;SITEPOST=1;SVLEN=254;SVTYPE=ALU;TSD=CTTCAGTCTAGATTTT\tGT\t1|0\n11\t49282683\tALU_umary_ALU_8572\tC\t<INS:ME:ALU>\t.\t.\tAC=716;AF=0.142971;AFR_AF=0.2428;AMR_AF=0.0965;AN=5008;CS=ALU_umary;EAS_AF=0.126;EUR_AF=0.1133;MEINFO=AluUndef,1,281,-;NS=2504;SAS_AF=0.089;SITEPOST=1;SVLEN=280;SVTYPE=ALU;TSD=AATTTACATATCTTC\tGT\t0|1\n11\t49425081\tDEL_pindel_33483\tGAAGAAATAATGGTGAAGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGCGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCCGGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA\tG\t.\tPASS\tAC=2818;AF=0.5627;AFR_AF=0.562;AMR_AF=0.5865;AN=5008;CS=DEL_pindel;EAS_AF=0.5754;END=49425416;EUR_AF=0.5358;MEINFO=AluYb6_2,1,281,+;NS=2504;SAS_AF=0.5613;SITEPOST=0.969;SVTYPE=DEL_ALU\tGT\t0|1\n11\t49655824\tALU_umary_ALU_8574\tT\t<INS:ME:ALU>\t.\t.\tAC=1624;AF=0.324281;AFR_AF=0.1316;AMR_AF=0.4366;AN=5008;CS=ALU_umary;EAS_AF=0.3929;EUR_AF=0.4274;MEINFO=AluYa5,14,281,-;NS=2504;SAS_AF=0.3282;SITEPOST=1;SVLEN=267;SVTYPE=ALU;TSD=CAGGTGTGTGTTCTT\tGT\t1|1\n11\t49883571\tNUMT_umich_24\tT\t<INS:MT>\t176\tPASS\tAC=2383;AF=0.475839;AFR_AF=0.2784;AMR_AF=0.6081;AN=5008;CIEND=-5,0;CIPOS=0,5;CS=NUMT_umich;EAS_AF=0.5476;END=49883575;EUR_AF=0.5726;MEND=16575;MLEN=14;MSTART=6;NS=2504;SAS_AF=0.4755;SVTYPE=INS\tGT\t1|1\n11\t50234630\tDEL_pindel_33502\tAGAGGGAAGGAAGGAAGGAAGAAGAAAGAGAGAGGGAGGGAGGGAAGGAAG\tA\t.\tPASS\tAC=344;AF=0.0686901;AFR_AF=0.0393;AMR_AF=0.0591;AN=5008;CS=DEL_pindel;EAS_AF=0.0615;END=50234680;EUR_AF=0.1282;NS=2504;SAS_AF=0.0613;SITEPOST=0.9976;SVTYPE=DEL\tGT\t0|1\n11\t50640269\tBI_GS_DEL1_B4_P1874_88\tA\t<CN0>\t100\tPASS\tAC=2125;AF=0.424321;AFR_AF=0.2209;AMR_AF=0.5692;AN=5008;CIEND=0,1;CIPOS=0,1;CS=DEL_union;EAS_AF=0.5407;END=50641124;EUR_AF=0.492;MC=EM_DL_DEL10175459;NS=2504;SAS_AF=0.407;SVTYPE=DEL\tGT\t1|0\n11\t51341174\tBI_GS_DEL1_B5_P1875_51\tT\t<CN0>\t100\tPASS\tAC=2159;AF=0.43111;AFR_AF=0.2027;AMR_AF=0.5821;AN=5008;CIEND=0,1;CIPOS=0,1;CS=DEL_union;EAS_AF=0.5397;END=51362976;EUR_AF=0.5457;MC=EM_DL_DEL15116,YL_CN_FIN_2478;NS=2504;SAS_AF=0.4029;SVTYPE=DEL\tGT\t1|0\n11\t51346696\tYL_CN_GWD_3605\tC\t<CN0>\t100\tPASS\tAC=2360;AF=0.471246;AFR_AF=0.2685;AMR_AF=0.6124;AN=5008;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0.5407;END=51348982;EUR_AF=0.6064;MC=YL_CN_MSL_2432;NS=2504;SAS_AF=0.4346;SVTYPE=DEL\tGT\t1|0\n11\t51353224\tDUP_gs_CNV_11_51353224_51367675\tT\t<CN0>,<CN2>\t.\tPASS\tAC=2160,4;AF=0.43131,0.00079872;AFR_AF=0.2027,0.0008;AMR_AF=0.5821,0;AN=5008;CS=DUP_gs;EAS_AF=0.5397,0.001;END=51367675;EUR_AF=0.5447,0;NS=2504;SAS_AF=0.4049,0.002;SITEPOST=1;SVTYPE=CNV\tGT\t1|0\n11\t51577840\tBI_GS_DEL1_B4_P1875_48\tC\t<CN0>\t100\tPASS\tAC=477;AF=0.0952476;AFR_AF=0.1097;AMR_AF=0.0648;AN=5008;CIEND=-21,22;CIPOS=-21,22;CS=DEL_union;EAS_AF=0.0863;END=51581765;EUR_AF=0.1233;MC=YL_CN_CEU_3300;NS=2504;SAS_AF=0.0777;SVTYPE=DEL\tGT\t0|1\n11\t54885396\tBI_GS_DEL1_B3_P1878_2\tG\t<CN0>\t100\tPASS\tAC=787;AF=0.157149;AFR_AF=0.0764;AMR_AF=0.2277;AN=5008;CIEND=-40,41;CIPOS=-40,41;CS=DEL_union;EAS_AF=0.1508;END=54892290;EUR_AF=0.2038;MC=YL_CN_CDX_2232;NS=2504;SAS_AF=0.1748;SVTYPE=DEL\tGT\t1|0\n11\t56303363\tALU_umary_ALU_8590\tG\t<INS:ME:ALU>\t.\t.\tAC=2598;AF=0.51877;AFR_AF=0.2912;AMR_AF=0.5634;AN=5008;CS=ALU_umary;EAS_AF=0.6458;EUR_AF=0.5517;MEINFO=AluUndef,23,281,+;NS=2504;SAS_AF=0.6299;SITEPOST=1;SVLEN=258;SVTYPE=ALU;TSD=AAATAAAAACTTTTACTATAG\tGT\t1|1\n11\t58166965\tBI_GS_DEL1_B3_P1882_5\tA\t<CN0>\t100\tPASS\tAC=1453;AF=0.290136;AFR_AF=0.3533;AMR_AF=0.2695;AN=5008;CIEND=0,1;CIPOS=0,1;CS=DEL_union;EAS_AF=0.1448;END=58168146;EUR_AF=0.3628;MC=SI_BD_11421;NS=2504;SAS_AF=0.2945;SVTYPE=DEL\tGT\t0|1\n11\t61107785\tDEL_pindel_33653\tTCCCTGCCTTCCTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCCGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGC\tT\t.\tPASS\tAC=3944;AF=0.78754;AFR_AF=0.739;AMR_AF=0.8314;AN=5008;CS=DEL_pindel;EAS_AF=0.7867;END=61108124;EUR_AF=0.83;MEINFO=AluYb6_2,2,281,-;NS=2504;SAS_AF=0.7791;SITEPOST=0.992;SVTYPE=DEL_ALU\tGT\t1|1\n11\t61944785\tBI_GS_DEL1_B1_P1885_701\tT\t<CN0>\t100\tPASS\tAC=963;AF=0.192292;AFR_AF=0.0688;AMR_AF=0.3487;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.0615;END=61945082;EUR_AF=0.3976;MC=DEL_pindel_33680;NS=2504;SAS_AF=0.1718;SVTYPE=DEL\tGT\t0|1\n11\t64268439\tDEL_pindel_33738\tGCCGGCTGGGCCTGCTTGTGGGTAAGGGAGAGAGGACAGAAGCCTGTGCTGCTCAGGAGCC\tG\t.\tPASS\tAC=4256;AF=0.84984;AFR_AF=0.4644;AMR_AF=0.9539;AN=5008;CS=DEL_pindel;EAS_AF=0.997;END=64268499;EUR_AF=0.993;NS=2504;SAS_AF=0.998;SITEPOST=1;SVTYPE=DEL\tGT\t1|1\n11\t65984338\tALU_umary_ALU_8622\tT\t<INS:ME:ALU>\t.\t.\tAC=755;AF=0.150759;AFR_AF=0.1422;AMR_AF=0.0922;AN=5008;CS=ALU_umary;EAS_AF=0.2252;EUR_AF=0.1402;MEINFO=AluYa5,1,281,-;NS=2504;SAS_AF=0.138;SITEPOST=1;SVLEN=280;SVTYPE=ALU;TSD=GTGGAGACTTCTT\tGT\t1|1\n11\t66711479\tYL_CN_MXL_2241\tA\t<CN0>\t100\tPASS\tAC=1980;AF=0.395367;AFR_AF=0.3986;AMR_AF=0.3501;AN=5008;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0.4782;END=66713552;EUR_AF=0.4583;MC=BI_GS_DEL1_B1_P1890_525,UW_VH_904,SI_BD_11470,UW_VH_7837,YL_CN_YRI_3357;NS=2504;SAS_AF=0.273;SVTYPE=DEL\tGT\t0|1\n11\t67599059\tL1_umary_LINE1_2136\tG\t<INS:ME:LINE1>\t.\t.\tAC=1448;AF=0.289137;AFR_AF=0.0401;AMR_AF=0.3343;AN=5008;CS=L1_umary;EAS_AF=0.504;EUR_AF=0.3221;MEINFO=LINE1,1,6018,+;NS=2504;SAS_AF=0.3384;SITEPOST=1;SVLEN=6017;SVTYPE=LINE1;TSD=AATAAAGAACTGAG\tGT\t1|1\n11\t68067241\tBI_GS_DEL1_B5_P1892_54\tG\t<CN0>\t100\tPASS\tAC=218;AF=0.0435303;AFR_AF=0.0045;AMR_AF=0.0735;AN=5008;CIEND=-30,31;CIPOS=-30,31;CS=DEL_union;EAS_AF=0.001;END=68069163;EUR_AF=0.1382;MC=YL_CN_PUR_3213,EM_DL_DEL15739,SI_BD_11482;NS=2504;SAS_AF=0.0215;SVTYPE=DEL\tGT\t0|1\n11\t68183089\tBI_GS_DEL1_B5_P1892_152\tT\t<CN0>\t100\tPASS\tAC=3460;AF=0.690895;AFR_AF=0.4024;AMR_AF=0.7435;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.7877;END=68183404;EUR_AF=0.7684;NS=2504;SAS_AF=0.864;SVTYPE=DEL\tGT\t1|0\n11\t69400834\tBI_GS_DEL1_B2_P1893_325\tT\t<CN0>\t100\tPASS\tAC=1819;AF=0.363219;AFR_AF=0.1346;AMR_AF=0.3444;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.2907;END=69401399;EUR_AF=0.5785;MC=UW_VH_905;NS=2504;SAS_AF=0.5389;SVTYPE=DEL\tGT\t1|1\n11\t69548392\tALU_umary_ALU_8629\tG\t<INS:ME:ALU>\t.\t.\tAC=668;AF=0.133387;AFR_AF=0.0666;AMR_AF=0.1354;AN=5008;CS=ALU_umary;EAS_AF=0.2917;EUR_AF=0.0984;MEINFO=AluUndef,10,281,-;NS=2504;SAS_AF=0.0951;SITEPOST=1;SVLEN=271;SVTYPE=ALU;TSD=null\tGT\t1|0\n11\t71861597\tDEL_pindel_33914\tTTACTGAATTGTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCCGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCGCTCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC\tT\t.\tPASS\tAC=3457;AF=0.690296;AFR_AF=0.5991;AMR_AF=0.7349;AN=5008;CS=DEL_pindel;EAS_AF=0.7103;END=71861912;EUR_AF=0.7584;MEINFO=AluYb6_2,1,281,-;NS=2504;SAS_AF=0.6912;SITEPOST=0.9752;SVTYPE=DEL_ALU\tGT\t1|1\n11\t74024854\tBI_GS_DEL1_B4_P1898_7\tG\t<CN0>\t100\tPASS\tAC=1046;AF=0.208866;AFR_AF=0.2012;AMR_AF=0.1311;AN=5008;CIEND=-7,7;CIPOS=-7,7;CS=DEL_union;EAS_AF=0.2817;END=74027358;EUR_AF=0.175;MC=UW_VH_1544,YL_CN_ACB_3005,EM_DL_DEL15941,SI_BD_11523;NS=2504;SAS_AF=0.2342;SVTYPE=DEL\tGT\t0|1\n11\t74145057\tDEL_pindel_33949\tCAAAAGTGGAAACACGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGCGGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCCGGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA\tC\t.\tPASS\tAC=2697;AF=0.538538;AFR_AF=0.6634;AMR_AF=0.4784;AN=5008;CS=DEL_pindel;EAS_AF=0.5069;END=74145404;EUR_AF=0.5398;MEINFO=AluYb6_2,1,281,+;NS=2504;SAS_AF=0.4438;SITEPOST=0.99535;SVTYPE=DEL_ALU\tGT\t1|0\n11\t81556171\tDEL_pindel_34092\tTAGGTTCATATATATATATATATATATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTATGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCTGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC\tT\t.\tPASS\tAC=2054;AF=0.410144;AFR_AF=0.528;AMR_AF=0.2867;AN=5008;CS=DEL_pindel;EAS_AF=0.2014;END=81556538;EUR_AF=0.4254;MEINFO=AluYa5,1,281,-;NS=2504;SAS_AF=0.5378;SITEPOST=0.999;SVTYPE=DEL_ALU\tGT\t1|1\n11\t82132213\tDEL_pindel_34105\tATAATGGGAATTTTATGGGTACATAAAATTGTAATAATGATAACTAACAGTGAGTTAGGAAATAATTAGTTGTCATTAAATCAATATGAAAATTGAAAGCTTATATGAGAGGGTATGAAATAGAAAAGGAAACGGGGAGACTTTTAACCAAAATGCATATTCAAAGCTCACATTCCTCCCTAGGAACAGCAAAATTGACAAAGCACTCTGGTCCCAATTATAGCAACTAAGAAGATAGTAATACAATCTTTCTTTTGATCTTGACTGGTAAACAGCAATCCATATGAACTATACAGAGCTGGGTCATAACAGTGACTAAGTAGTGGTAAATTTATGTGGATAATTAGAATAGTGTTTGCTGATATCAATT\tA\t.\tPASS\tAC=239;AF=0.0477236;AFR_AF=0.0703;AMR_AF=0.0288;AN=5008;CS=DEL_pindel;EAS_AF=0.0179;END=82132582;EUR_AF=0.0427;NS=2504;SAS_AF=0.0665;SITEPOST=0.9993;SVTYPE=DEL\tGT\t1|0\n11\t85542984\tALU_umary_ALU_8698\tT\t<INS:ME:ALU>\t.\t.\tAC=82;AF=0.0163738;AFR_AF=0.0008;AMR_AF=0.0231;AN=5008;CS=ALU_umary;EAS_AF=0;EUR_AF=0.0467;MEINFO=AluUndef,2,281,-;NS=2504;SAS_AF=0.0184;SITEPOST=1;SVLEN=279;SVTYPE=ALU;TSD=CATGCTGGCTTATTTTT\tGT\t0|1\n11\t87918544\tDEL_pindel_34217\tTCAATCTCTCAAAATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGTTCTGTCGCCCAGGCGGGAGTGCTGTGGCGCGATCTCCGCTCACTGCAAGCTCCGCCTTCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACTGCGCCCGGCTAATTTTTTGTATTTTTTTAGTAGAGACGGGGTTTCACCGTGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGC\tT\t.\tPASS\tAC=2175;AF=0.434305;AFR_AF=0.5613;AMR_AF=0.4193;AN=5008;CS=DEL_pindel;EAS_AF=0.2728;END=87918861;EUR_AF=0.4672;MEINFO=AluY,2,281,-;NS=2504;SAS_AF=0.4059;SITEPOST=0.996;SVTYPE=DEL_ALU\tGT\t1|1\n11\t88964484\tBI_GS_DEL1_B4_P1912_207\tG\t<CN0>\t100\tPASS\tAC=957;AF=0.191094;AFR_AF=0.3079;AMR_AF=0.1398;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.126;END=88967933;EUR_AF=0.1153;MC=EM_DL_DEL16277,UW_VH_909,YL_CN_TSI_2561;NS=2504;SAS_AF=0.2147;SVTYPE=DEL\tGT\t1|1\n11\t89932513\tDEL_pindel_34247\tGAGTTTACTTGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAAAAAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAAGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAATAAATAAATAAAAAAAATAAAAAAAAAAA\tG\t.\tPASS\tAC=2022;AF=0.403754;AFR_AF=0.2579;AMR_AF=0.4597;AN=5008;CS=DEL_pindel;EAS_AF=0.4901;END=89932852;EUR_AF=0.3956;MEINFO=AluYa5,1,281,+;NS=2504;SAS_AF=0.4806;SITEPOST=0.9926;SVTYPE=DEL_ALU\tGT\t0|1\n11\t90193711\tBI_GS_DEL1_B2_P1914_146\tG\t<CN0>\t100\tPASS\tAC=1180;AF=0.235623;AFR_AF=0.0983;AMR_AF=0.3199;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.4494;END=90196000;EUR_AF=0.1471;MC=YL_CN_CEU_3374,UW_VH_910,YL_CN_STU_2667,SI_BD_11611,EM_DL_DEL16323;NS=2504;SAS_AF=0.2321;SVTYPE=DEL\tGT\t0|1\n11\t92608491\tALU_umary_ALU_8745\tG\t<INS:ME:ALU>\t.\t.\tAC=2109;AF=0.421126;AFR_AF=0.3911;AMR_AF=0.4193;AN=5008;CS=ALU_umary;EAS_AF=0.3839;EUR_AF=0.4493;MEINFO=AluYc1,7,281,+;NS=2504;SAS_AF=0.4724;SITEPOST=1;SVLEN=274;SVTYPE=ALU;TSD=AAGATCCTAGACAG\tGT\t1|1\n11\t92771855\tUW_VH_1851\tC\t<CN0>\t100\tPASS\tAC=75;AF=0.014976;AFR_AF=0.003;AMR_AF=0.0245;AN=5008;CIEND=0,323;CIPOS=-307,0;CS=DEL_union;EAS_AF=0;END=92773374;EUR_AF=0.0467;MC=BI_GS_DEL1_B5_P1916_1088;NS=2504;SAS_AF=0.0072;SVTYPE=DEL\tGT\t1|0\n11\t93021134\tBI_GS_DEL1_B4_P1917_6\tG\t<CN0>\t100\tPASS\tAC=1391;AF=0.277756;AFR_AF=0.3283;AMR_AF=0.353;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.1607;END=93022156;EUR_AF=0.4085;MC=SI_BD_11629,UW_VH_1550;NS=2504;SAS_AF=0.1421;SVTYPE=DEL\tGT\t1|0\n11\t93102800\tDEL_pindel_34313\tTAAAGAATGGATTTACGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGAGGTGGCGGGCGCCTGTAGTCCCAGCTTCTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCCAGGGGGCGGAGCCTGCAGTGAGCCGAGATTGCGCCACTGCACTCCAGCCTGGGCGACGGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAA\tT\t.\tPASS\tAC=3322;AF=0.663339;AFR_AF=0.6815;AMR_AF=0.6671;AN=5008;CS=DEL_pindel;EAS_AF=0.6944;END=93103118;EUR_AF=0.6352;MEINFO=AluYe,1,281,+;NS=2504;SAS_AF=0.6329;SITEPOST=0.9702;SVTYPE=DEL_ALU\tGT\t1|1\n11\t93578001\tBI_GS_DEL1_B4_P1917_131\tC\t<CN0>\t100\tPASS\tAC=1964;AF=0.392173;AFR_AF=0.323;AMR_AF=0.3156;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.5556;END=93578212;EUR_AF=0.3529;NS=2504;SAS_AF=0.4121;SVTYPE=DEL\tGT\t1|0\n11\t93679228\tSI_BD_11632\tA\t<CN0>\t100\tPASS\tAC=2387;AF=0.476637;AFR_AF=0.5265;AMR_AF=0.3602;AN=5008;CIEND=-50,291;CIPOS=-291,50;CS=DEL_union;EAS_AF=0.5813;END=93681405;EUR_AF=0.4304;NS=2504;SAS_AF=0.4315;SVTYPE=DEL\tGT\t1|0\n11\t94091791\tDEL_pindel_34345\tAAGCTGAAGCAGGTAGTGAGTCACTTGAGGCCAGGAGTTAGAGACCAGCCT\tA\t.\tPASS\tAC=2591;AF=0.517372;AFR_AF=0.348;AMR_AF=0.5605;AN=5008;CS=DEL_pindel;EAS_AF=0.6319;END=94091841;EUR_AF=0.5845;NS=2504;SAS_AF=0.5286;SITEPOST=0.9999;SVTYPE=DEL\tGT\t0|1\n11\t94684369\tL1_umary_LINE1_2163\tA\t<INS:ME:LINE1>\t.\t.\tAC=1516;AF=0.302716;AFR_AF=0.1952;AMR_AF=0.3026;AN=5008;CS=L1_umary;EAS_AF=0.252;EUR_AF=0.4334;MEINFO=LINE1,1927,6018,-;NS=2504;SAS_AF=0.3661;SITEPOST=1;SVLEN=4091;SVTYPE=LINE1;TSD=AA\tGT\t1|1\n11\t96001923\tBI_GS_DEL1_B5_P1920_7\tT\t<CN0>\t100\tPASS\tAC=922;AF=0.184105;AFR_AF=0.2504;AMR_AF=0.2997;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.1567;END=96003398;EUR_AF=0.1093;MC=UW_VH_2247,EM_DL_DEL10192033,YL_CN_PEL_2432,YL_CN_PJL_2803,YL_CN_PUR_3263,YL_CN_JPT_2896,YL_CN_MXL_2283;NS=2504;SAS_AF=0.1176;SVTYPE=DEL\tGT\t0|1\n11\t96233119\tDEL_pindel_34397\tTAAAACTCAGCACCGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTGGTAGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATGGCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAA\tT\t.\tPASS\tAC=1715;AF=0.342452;AFR_AF=0.3623;AMR_AF=0.255;AN=5008;CS=DEL_pindel;EAS_AF=0.4732;END=96233431;EUR_AF=0.2435;MEINFO=AluYc1,1,281,+;NS=2504;SAS_AF=0.3446;SITEPOST=0.9994;SVTYPE=DEL_ALU\tGT\t0|1\n11\t96614759\tDEL_pindel_34403\tAGAATTATTCACTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGCAATCTCGGCTCACTGCATGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTTTTTTTTTTTTTTTTTTAATAGAGATAAGTTTTCACCGTGTTAGCCAGGATGGTCTCAATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC\tA\t.\tPASS\tAC=2199;AF=0.439097;AFR_AF=0.438;AMR_AF=0.4035;AN=5008;CS=DEL_pindel;EAS_AF=0.2351;END=96615086;EUR_AF=0.5199;MEINFO=AluY,1,281,-;NS=2504;SAS_AF=0.593;SITEPOST=0.99865;SVTYPE=DEL_ALU\tGT\t1|1\n11\t98248208\tBI_GS_DEL1_B4_P1922_42\tT\t<CN0>\t100\tPASS\tAC=1668;AF=0.333067;AFR_AF=0.4788;AMR_AF=0.3055;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.0198;END=98248606;EUR_AF=0.5;MC=DEL_pindel_34443,UW_VH_916;NS=2504;SAS_AF=0.3067;SVTYPE=DEL\tGT\t0|1\n11\t99276322\tDEL_pindel_34465\tTAGAATTCTGAATTCCTGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGCGGTGGCGGGCGCCTGTAGTCCCGGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCCGGCCTGGGCAACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA\tT\t.\tPASS\tAC=3716;AF=0.742013;AFR_AF=0.7337;AMR_AF=0.7378;AN=5008;CS=DEL_pindel;EAS_AF=0.7421;END=99276662;EUR_AF=0.7535;MEINFO=AluYb6_2,1,281,+;NS=2504;SAS_AF=0.7444;SITEPOST=0.95335;SVTYPE=DEL_ALU\tGT\t0|1\n11\t102169772\tALU_umary_ALU_8792\tT\t<INS:ME:ALU>\t.\t.\tAC=1295;AF=0.258586;AFR_AF=0.2617;AMR_AF=0.2954;AN=5008;CS=ALU_umary;EAS_AF=0.2192;EUR_AF=0.2734;MEINFO=AluYc2,31,281,-;NS=2504;SAS_AF=0.2536;SITEPOST=1;SVLEN=250;SVTYPE=ALU;TSD=AGTTTGCCAGTATTTTATT\tGT\t1|0\n11\t102471846\tDEL_pindel_34541\tGTCGGCTATTCTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC\tG\t.\tPASS\tAC=2192;AF=0.4377;AFR_AF=0.3585;AMR_AF=0.4452;AN=5008;CS=DEL_pindel;EAS_AF=0.377;END=102472162;EUR_AF=0.4871;MEINFO=AluYa5,1,281,-;NS=2504;SAS_AF=0.5511;SITEPOST=0.9991;SVTYPE=DEL_ALU\tGT\t0|1\n11\t103087928\tDEL_pindel_34562\tATGGGAGTTAGGATTTCTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCCGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGAC\tA\t.\tPASS\tAC=3677;AF=0.734225;AFR_AF=0.7632;AMR_AF=0.7248;AN=5008;CS=DEL_pindel;EAS_AF=0.7341;END=103088084;EUR_AF=0.7326;MEINFO=AluYb,162,281,-;NS=2504;SAS_AF=0.7035;SITEPOST=0.9759;SVTYPE=DEL_ALU\tGT\t0|1\n11\t103201280\tALU_umary_ALU_8801\tT\t<INS:ME:ALU>\t.\t.\tAC=1922;AF=0.383786;AFR_AF=0.2224;AMR_AF=0.5115;AN=5008;CS=ALU_umary;EAS_AF=0.4127;EUR_AF=0.492;MEINFO=AluYb8,4,275,-;NS=2504;SAS_AF=0.3701;SITEPOST=1;SVLEN=271;SVTYPE=ALU;TSD=ACAATAAATTTTTT\tGT\t0|1\n11\t103916379\tEM_DL_DEL16736\tA\t<CN0>\t100\tPASS\tAC=615;AF=0.122804;AFR_AF=0.09;AMR_AF=0.1138;AN=5008;CIEND=-150,150;CIPOS=-150,150;CS=DEL_union;EAS_AF=0.0734;END=103918469;EUR_AF=0.1471;MC=YL_CN_ASW_2773,BI_GS_DEL1_B3_P1927_34,SI_BD_11691;NS=2504;SAS_AF=0.1994;SVTYPE=DEL\tGT\t0|1\n11\t104180380\tDEL_pindel_34567\tAAAATAAAAAAACACGGCCGGGCGCGGTGGCTCACGCTTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCGGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAATTAAAAAAAAAAAATAAAATAAAAAAAATAAAT\tA\t.\tPASS\tAC=3566;AF=0.712061;AFR_AF=0.671;AMR_AF=0.7003;AN=5008;CS=DEL_pindel;EAS_AF=0.7371;END=104180723;EUR_AF=0.7187;MEINFO=AluYa4_4,1,281,+;NS=2504;SAS_AF=0.7434;SITEPOST=0.9303;SVTYPE=DEL_ALU\tGT\t1|1\n11\t106044581\tALU_umary_ALU_8820\tA\t<INS:ME:ALU>\t.\t.\tAC=2128;AF=0.42492;AFR_AF=0.1346;AMR_AF=0.536;AN=5008;CS=ALU_umary;EAS_AF=0.4812;EUR_AF=0.5636;MEINFO=AluYa5,30,280,+;NS=2504;SAS_AF=0.5378;SITEPOST=1;SVLEN=250;SVTYPE=ALU;TSD=AAAGAAATAGCACTTGA\tGT\t1|0\n11\t106595867\tDEL_pindel_34627\tTGACATAAATTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGGAGGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGC\tT\t.\tPASS\tAC=1712;AF=0.341853;AFR_AF=0.4017;AMR_AF=0.3559;AN=5008;CS=DEL_pindel;EAS_AF=0.1399;END=106596164;EUR_AF=0.3966;MEINFO=AluY,34,281,-;NS=2504;SAS_AF=0.4029;SITEPOST=0.9956;SVTYPE=DEL_ALU\tGT\t1|0\n11\t107158610\tDEL_pindel_34642\tACTTAGACTTCTGAGACTTTTAAAAATTTGCCCCAACTATTTCAAGATATTCTTAT\tA\t.\tPASS\tAC=1140;AF=0.227636;AFR_AF=0.2057;AMR_AF=0.1787;AN=5008;CS=DEL_pindel;EAS_AF=0.2718;END=107158665;EUR_AF=0.2505;NS=2504;SAS_AF=0.2229;SITEPOST=1;SVTYPE=DEL\tGT\t1|1\n11\t109930919\tDEL_pindel_34703\tTGAACAGTTTCTCTTAGTTTTCAGTTTCTATCATGATTCATCCAACAAGTCATTATTGAAAAATTATTGTGAGCCA\tT\t.\tPASS\tAC=3587;AF=0.716254;AFR_AF=0.6823;AMR_AF=0.6873;AN=5008;CS=DEL_pindel;EAS_AF=0.871;END=109930994;EUR_AF=0.7058;NS=2504;SAS_AF=0.6339;SITEPOST=0.9993;SVTYPE=DEL\tGT\t1|1\n11\t109976699\tDEL_pindel_34704\tGAAAAGTTATACCAGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCTGACTAACACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTGGTAGCAGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCGCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAATAAATAAATAAATAAATAAATAAAT\tG\t.\tPASS\tAC=3108;AF=0.620607;AFR_AF=0.6346;AMR_AF=0.6455;AN=5008;CS=DEL_pindel;EAS_AF=0.7431;END=109977025;EUR_AF=0.5905;MEINFO=AluYc1,2,281,+;NS=2504;SAS_AF=0.4888;SITEPOST=0.99225;SVTYPE=DEL_ALU\tGT\t1|1\n11\t110276938\tALU_umary_ALU_8837\tT\t<INS:ME:ALU>\t.\t.\tAC=676;AF=0.134984;AFR_AF=0.1475;AMR_AF=0.0951;AN=5008;CS=ALU_umary;EAS_AF=0.1845;EUR_AF=0.1064;MEINFO=AluYa4_4,1,281,-;NS=2504;SAS_AF=0.1247;SITEPOST=1;SVLEN=280;SVTYPE=ALU;TSD=CGGGCCCGGTATTTTT\tGT\t0|1\n11\t119932287\tDEL_pindel_34858\tGCCTCCGTGGGATGCTTTCCTGTTGCCACAGCAACTGGATTCCCAGGGAACCTGTGGGCCCAGGCCACCATCTTGGGGAGTTCCTAATGATATGTTCTGAAAATTACAACATTTCAACCCAGGTCCCGTCGCGCAGCCCCACACTGGGGCTACTAAGCTAGAGAGAGAGGGTGTCCTGTGGTGAAACTGCATTTTCTGGTGCTTGCCTATTTGGGGCTGGGAGAGGTTGAGAGGAGAACTAGGCCATGGTTTCTAAGGTGTTCCCAGCTGGCTTGGCCAGGTCATCCCACCGTGGCCAGCACCCGCAGCGTCTGGAGGCTGGGAGGAGGAGCGCTCCCCTGTGATCCCTCCCATCTTCCCACTGCGCTTA\tG\t.\tPASS\tAC=1306;AF=0.260783;AFR_AF=0.3971;AMR_AF=0.2853;AN=5008;CS=DEL_pindel;EAS_AF=0.1359;END=119932656;EUR_AF=0.3072;NS=2504;SAS_AF=0.1401;SITEPOST=0.9994;SVTYPE=DEL\tGT\t1|0\n11\t122595306\tDEL_pindel_34911\tCTGGGCCAGGCCTGAACTGGCTTCTTAGAGGAGGTAGTAGCATTTGATCTTAAAA\tC\t.\tPASS\tAC=299;AF=0.0597045;AFR_AF=0.0635;AMR_AF=0.0504;AN=5008;CS=DEL_pindel;EAS_AF=0.002;END=122595360;EUR_AF=0.1034;NS=2504;SAS_AF=0.0757;SITEPOST=0.9993;SVTYPE=DEL\tGT\t0|1\n11\t124830138\tDEL_pindel_34944\tTAAAGAAAAGTGCCGCGGAGCCTGCAGTGAGCCGAGATTGCGCCACTGCACTCCAGCCTGGGCGACAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAA\tT\t.\tPASS\tAC=3600;AF=0.71885;AFR_AF=0.708;AMR_AF=0.5692;AN=5008;CS=DEL_pindel;EAS_AF=0.8145;END=124830246;EUR_AF=0.6869;MEINFO=AluY,212,281,+;NS=2504;SAS_AF=0.774;SITEPOST=0.9785;SVTYPE=DEL_ALU\tGT\t1|0\n11\t125053085\tDEL_pindel_34947\tCGATGAATCCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCACTCTGTCGCCCAGGTCGGACTGCGGACTGCAGTGGTGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAG\tC\t.\tPASS\tAC=1777;AF=0.354832;AFR_AF=0.3533;AMR_AF=0.3401;AN=5008;CS=DEL_pindel;EAS_AF=0.3988;END=125053375;EUR_AF=0.3907;MEINFO=AluYb6_2,37,281,-;NS=2504;SAS_AF=0.2853;SITEPOST=0.9995;SVTYPE=DEL_ALU\tGT\t0|1\n11\t125719438\tDEL_pindel_34957\tGCATATGTTCATTGCAGCACTATTCACAATAGCAAAGACATGGAATAAACCCAAATGCCCATCAATGATAGACTGGATAAAGAAAATGTGGAACATACACACTATGAAATACTATGCAGCCATAAAAAGGAATGAGATCATGTCCTTTTCAAGGA\tG\t.\tPASS\tAC=998;AF=0.199281;AFR_AF=0.2458;AMR_AF=0.1556;AN=5008;CS=DEL_pindel;EAS_AF=0.2698;END=125719592;EUR_AF=0.1491;NS=2504;SAS_AF=0.1462;SITEPOST=0.9998;SVTYPE=DEL\tGT\t0|1\n11\t127456298\tDEL_pindel_35006\tATGATTTAGGATATTACTGCAAAGTAGTTTGTTTAAAAAGAGGGCAGCCTGGTTGGAAATCTTCCCAGGAGAGCCATAGAAAATATGTTAGGGTAAGAAATAAGACTGACCTTGATTTCAATTAATGAAACCACT\tA\t.\tPASS\tAC=2703;AF=0.539736;AFR_AF=0.348;AMR_AF=0.5504;AN=5008;CS=DEL_pindel;EAS_AF=0.7768;END=127456432;EUR_AF=0.5427;NS=2504;SAS_AF=0.544;SITEPOST=0.9962;SVTYPE=DEL\tGT\t1|0\n11\t127740935\tALU_umary_ALU_8903\tA\t<INS:ME:ALU>\t.\t.\tAC=905;AF=0.180711;AFR_AF=0.0514;AMR_AF=0.219;AN=5008;CS=ALU_umary;EAS_AF=0.2609;EUR_AF=0.1998;MEINFO=AluUndef,25,269,-;NS=2504;SAS_AF=0.226;SITEPOST=0.9722;SVLEN=244;SVTYPE=ALU;TSD=null\tGT\t1|0\n11\t128682712\tBI_GS_DEL1_B4_P1952_212\tG\t<CN0>\t100\tPASS\tAC=1049;AF=0.209465;AFR_AF=0.1097;AMR_AF=0.2248;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.244;END=128683409;EUR_AF=0.2893;MC=SI_BD_11798,UW_VH_2249;NS=2504;SAS_AF=0.2157;SVTYPE=DEL\tGT\t1|0\n11\t132368628\tDEL_pindel_35102\tTGTTTTAAAATATGGCTCTTAGGCATATAGGACCCGAAGAACCCAAGTCCTGATG\tT\t.\tPASS\tAC=1586;AF=0.316693;AFR_AF=0.3419;AMR_AF=0.3429;AN=5008;CS=DEL_pindel;EAS_AF=0.3829;END=132368682;EUR_AF=0.2177;NS=2504;SAS_AF=0.2975;SITEPOST=0.9994;SVTYPE=DEL\tGT\t1|0\n11\t132558585\tDEL_pindel_35111\tTAAAAATAGATTGGGAGGCCGAGGCGGGTGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAAAAAAAAATACAAAAAATTAGCCGGGCGCGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCCGGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAA\tT\t.\tPASS\tAC=2470;AF=0.493211;AFR_AF=0.534;AMR_AF=0.5461;AN=5008;CS=DEL_pindel;EAS_AF=0.4593;END=132558874;EUR_AF=0.4692;MEINFO=AluYb6_2,39,281,+;NS=2504;SAS_AF=0.4601;SITEPOST=0.999;SVTYPE=DEL_ALU\tGT\t1|0\n11\t134305647\tL1_umary_LINE1_2218\tG\t<INS:ME:LINE1>\t.\t.\tAC=3816;AF=0.761981;AFR_AF=0.795;AMR_AF=0.7608;AN=5008;CS=L1_umary;EAS_AF=0.7966;EUR_AF=0.7217;MEINFO=LINE1,5724,6019,-;NS=2504;SAS_AF=0.7239;SITEPOST=1;SVLEN=295;SVTYPE=LINE1;TSD=null\tGT\t1|1\n11\t134803512\tYL_CN_GWD_3795\tC\t<CN0>\t100\tPASS\tAC=2155;AF=0.430312;AFR_AF=0.5174;AMR_AF=0.4553;AN=5008;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0.4921;END=134805507;EUR_AF=0.341;NS=2504;SAS_AF=0.3231;SVTYPE=DEL\tGT\t0|1\n12\t177787\tDUP_gs_CNV_12_177787_187378\tT\t<CN2>,<CN3>\t.\tPASS\tAC=2250,7;AF=0.449281,0.00139776;AFR_AF=0.1558,0.0045;AMR_AF=0.4899,0;AN=5008;CS=DUP_gs;EAS_AF=0.4712,0;END=187378;EUR_AF=0.6521,0.001;NS=2504;SAS_AF=0.5859,0;SITEPOST=0.9955;SVTYPE=CNV\tGT\t1|1\n12\t240152\tDEL_pindel_35183\tATCCTCAGCACTGTGCCCCCCAGCTAGCGGCTCTTCCTCCCCACACCTGGCCCCCGC\tA\t.\tPASS\tAC=1502;AF=0.29992;AFR_AF=0.298;AMR_AF=0.2579;AN=5008;CS=DEL_pindel;EAS_AF=0.3075;END=240208;EUR_AF=0.2644;NS=2504;SAS_AF=0.3609;SITEPOST=0.98845;SVTYPE=DEL\tGT\t1|0\n12\t1864004\tBI_GS_DEL1_B1_P1961_685\tT\t<CN0>\t100\tPASS\tAC=1697;AF=0.338858;AFR_AF=0.1127;AMR_AF=0.3372;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.3909;END=1864320;EUR_AF=0.5;NS=2504;SAS_AF=0.4264;SVTYPE=DEL\tGT\t1|0\n12\t2089856\tALU_umary_ALU_8951\tT\t<INS:ME:ALU>\t.\t.\tAC=1116;AF=0.222843;AFR_AF=0.1664;AMR_AF=0.1412;AN=5008;CS=ALU_umary;EAS_AF=0.3839;EUR_AF=0.2584;MEINFO=AluYa4_4,1,274,-;NS=2504;SAS_AF=0.1544;SITEPOST=1;SVLEN=273;SVTYPE=ALU;TSD=CCTTTAACTATTTTT\tGT\t0|1\n12\t2300995\tDEL_pindel_35247\tTACACAGGCACACACATGCACTCACACATGTACTCGCATACACAGGCGCACACGTAC\tT\t.\tPASS\tAC=1210;AF=0.241613;AFR_AF=0.1407;AMR_AF=0.2767;AN=5008;CS=DEL_pindel;EAS_AF=0.2837;END=2301051;EUR_AF=0.2674;NS=2504;SAS_AF=0.2832;SITEPOST=0.9996;SVTYPE=DEL\tGT\t0|1\n12\t4043666\tBI_GS_DEL1_B4_P1964_10\tA\t<CN0>\t100\tPASS\tAC=468;AF=0.0934505;AFR_AF=0.1165;AMR_AF=0.1167;AN=5008;CIEND=-36,36;CIPOS=-36,36;CS=DEL_union;EAS_AF=0.121;END=4044819;EUR_AF=0.0268;MC=UW_VH_4410;NS=2504;SAS_AF=0.0859;SVTYPE=DEL\tGT\t0|1\n12\t7830054\tALU_umary_ALU_8982\tT\t<INS:ME:ALU>\t.\t.\tAC=152;AF=0.0303514;AFR_AF=0.0325;AMR_AF=0.0331;AN=5008;CS=ALU_umary;EAS_AF=0.004;EUR_AF=0.0656;MEINFO=AluUndef,2,280,-;NS=2504;SAS_AF=0.0164;SITEPOST=1;SVLEN=278;SVTYPE=ALU;TSD=TTATCAGGTTCTT\tGT\t0|1\n12\t8558501\tSI_BD_11938\tC\t<CN0>\t100\tPASS\tAC=4463;AF=0.891174;AFR_AF=0.6324;AMR_AF=0.9496;AN=5008;CIEND=-50,221;CIPOS=-221,50;CS=DEL_union;EAS_AF=1;END=8568269;EUR_AF=0.9871;MC=BI_GS_DEL1_B1_P1968_321,YL_CN_GWD_3812;NS=2504;SAS_AF=0.9888;SVTYPE=DEL\tGT\t1|1\n12\t8558618\tYL_CN_GWD_3813\tA\t<CN0>\t100\tPASS\tAC=4549;AF=0.908347;AFR_AF=0.6944;AMR_AF=0.9539;AN=5008;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=1;END=8591535;EUR_AF=0.9881;NS=2504;SAS_AF=0.9888;SVTYPE=DEL\tGT\t1|1\n12\t8568920\tDUP_gs_CNV_12_8568920_8587027\tT\t<CN0>,<CN2>\t.\tPASS\tAC=4581,17;AF=0.914736,0.00339457;AFR_AF=0.7179,0.0129;AMR_AF=0.9553,0;AN=5008;CS=DUP_gs;EAS_AF=1,0;END=8587027;EUR_AF=0.9881,0;NS=2504;SAS_AF=0.9888,0;SITEPOST=1;SVTYPE=CNV\tGT\t1|1\n12\t8625578\tDEL_pindel_35413\tTAGCTCCTACTTCTTTTTTTTTTTTTTTTTTTGAGACGGAGTTTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGCGATCTCGACTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCTGTGTAGCTGGGACTACAGGCACGCGCCACCATGCCCGGCTAATTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGTCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC\tT\t.\tPASS\tAC=3232;AF=0.645367;AFR_AF=0.5575;AMR_AF=0.67;AN=5008;CS=DEL_pindel;EAS_AF=0.7312;END=8625889;EUR_AF=0.6352;MEINFO=AluYg6a2,1,281,-;NS=2504;SAS_AF=0.6687;SITEPOST=0.9723;SVTYPE=DEL_ALU\tGT\t0|1\n12\t9016853\tSI_BD_11943\tC\t<CN0>\t100\tPASS\tAC=4638;AF=0.926118;AFR_AF=0.7368;AMR_AF=0.9683;AN=5008;CIEND=-50,318;CIPOS=-318,50;CS=DEL_union;EAS_AF=1;END=9017888;EUR_AF=1;MC=YL_CN_CEU_3433,EM_DL_DEL10212238,YL_CN_KHV_2845,UW_VH_933,YL_CN_PEL_2472;NS=2504;SAS_AF=1;SVTYPE=DEL\tGT\t1|1\n12\t9635128\tBI_GS_CNV_12_9635128_9688881\tA\t<CN0>\t100\tPASS\tAC=2504;AF=0.5;AFR_AF=0.4811;AMR_AF=0.4568;AN=5008;CIEND=0,500;CIPOS=-500,0;CS=DEL_union;EAS_AF=0.4405;END=9688881;EUR_AF=0.5775;NS=2504;SAS_AF=0.5378;SVTYPE=DEL\tGT\t1|0\n12\t9722037\tUW_VH_934\tA\t<CN0>\t100\tPASS\tAC=4398;AF=0.878195;AFR_AF=0.5696;AMR_AF=0.9539;AN=5008;CIEND=0,502;CIPOS=-550,0;CS=DEL_union;EAS_AF=0.995;END=9723011;EUR_AF=0.996;MC=SI_BD_11952;NS=2504;SAS_AF=1;SVTYPE=DEL\tGT\t1|1\n12\t10234202\tALU_umary_ALU_8992\tT\t<INS:ME:ALU>\t.\t.\tAC=2456;AF=0.490415;AFR_AF=0.5371;AMR_AF=0.4568;AN=5008;CS=ALU_umary;EAS_AF=0.3095;EUR_AF=0.675;MEINFO=AluYc1,1,281,-;NS=2504;SAS_AF=0.4479;SITEPOST=1;SVLEN=280;SVTYPE=ALU;TSD=GGGCAAATTAATTTCTTT\tGT\t1|1\n12\t11068046\tBI_GS_DEL1_B3_P1971_3\tT\t<CN0>\t100\tPASS\tAC=2582;AF=0.515575;AFR_AF=0.1354;AMR_AF=0.5893;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.7252;END=11068300;EUR_AF=0.6243;NS=2504;SAS_AF=0.6493;SVTYPE=DEL\tGT\t1|1\n12\t11222191\tDUP_gs_CNV_12_11222191_11249671\tG\t<CN0>,<CN2>\t.\tPASS\tAC=1694,2;AF=0.338259,0.00039936;AFR_AF=0.3411,0;AMR_AF=0.4654,0;AN=5008;CS=DUP_gs;EAS_AF=0.1944,0.001;END=11249671;EUR_AF=0.4911,0;MC=YL_CN_CEU_3446,EM_DL_DEL17773;NS=2504;SAS_AF=0.2352,0.001;SITEPOST=1;SVTYPE=CNV\tGT\t1|1\n12\t11258524\tDEL_pindel_35469\tAATAACTTATTCTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCACTCTTTCGCCCAAGCTGGACTGCAGTGGTGCTATCCCGGCTCACTGCAAGCTCCGCCTCTTGGGTTCATGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGATTACAGGCGCCCACCACCACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC\tA\t.\tPASS\tAC=1701;AF=0.339657;AFR_AF=0.3487;AMR_AF=0.4553;AN=5008;CS=DEL_pindel;EAS_AF=0.1925;END=11258838;EUR_AF=0.4791;MEINFO=AluYb,1,281,-;NS=2504;SAS_AF=0.2536;SITEPOST=0.9995;SVTYPE=DEL_ALU\tGT\t1|1\n12\t11288103\tDEL_pindel_35471\tCAACAAACCCATTTAGAAAAACAAAATCCAAAGCCATGTGATATATAAATATCT\tC\t.\tPASS\tAC=1734;AF=0.346246;AFR_AF=0.3533;AMR_AF=0.464;AN=5008;CS=DEL_pindel;EAS_AF=0.1905;END=11288156;EUR_AF=0.501;NS=2504;SAS_AF=0.2546;SITEPOST=0.9999;SVTYPE=DEL\tGT\t0|1\n12\t11515723\tDUP_gs_CNV_12_11515723_11544432\tA\t<CN0>,<CN2>,<CN3>,<CN4>\t.\tPASS\tAC=407,368,43,1;AF=0.08127,0.0734824,0.00858626,0.00019968;AFR_AF=0.1649,0.0643,0.0098,0.0008;AMR_AF=0.0533,0.0735,0,0;AN=5008;CS=DUP_gs;EAS_AF=0.0278,0.0952,0.0188,0;END=11544432;EUR_AF=0.0845,0.0974,0.007,0;NS=2504;SAS_AF=0.0399,0.0389,0.0041,0;SITEPOST=1;SVTYPE=CNV\tGT\t0|3\n12\t12544792\tINV_delly_INV00021200\tC\t<INV>\t.\tPASS\tAC=4129;AF=0.824481;AFR_AF=0.7784;AMR_AF=0.8184;AN=5008;CIEND=-21,21;CIPOS=-21,21;CS=INV_delly;EAS_AF=0.9048;END=12546607;EUR_AF=0.8539;IMPRECISE;NS=2504;SAS_AF=0.7781;SITEPOST=0.9996;SVTYPE=INV\tGT\t1|1\n12\t12933703\tL1_umary_LINE1_2231\tT\t<INS:ME:LINE1>\t.\t.\tAC=2132;AF=0.425719;AFR_AF=0.2466;AMR_AF=0.3919;AN=5008;CS=L1_umary;EAS_AF=0.621;EUR_AF=0.5219;MEINFO=LINE1,4272,6019,-;NS=2504;SAS_AF=0.3916;SITEPOST=1;SVLEN=1747;SVTYPE=LINE1;TSD=ACACAGCTAATTTTTGTAGTTTTT\tGT\t1|1\n12\t13199068\tDEL_pindel_35527\tAAGAAAATGTTCACTTGCGTCTACGGCCATACCACCCTGAACGCGCCCGATCTCGTCTGATCTCGGAAGCTAAGCAGGGTCGGGCCTGGTTAGTACTTGGATGGG\tA\t.\tPASS\tAC=1360;AF=0.271565;AFR_AF=0.3298;AMR_AF=0.232;AN=5008;CS=DEL_pindel;EAS_AF=0.3681;END=13199172;EUR_AF=0.1471;NS=2504;SAS_AF=0.2495;SITEPOST=0.9998;SVTYPE=DEL\tGT\t1|0\n12\t14258601\tDEL_pindel_35556\tGAAAGAAATAAAGGGCATCCGGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAAAATACAAAAAATTAGCCGGGTGCGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCCGGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAA\tG\t.\tPASS\tAC=1782;AF=0.355831;AFR_AF=0.4024;AMR_AF=0.2983;AN=5008;CS=DEL_pindel;EAS_AF=0.2649;END=14258932;EUR_AF=0.4274;MEINFO=AluYb6_2,1,281,+;NS=2504;SAS_AF=0.3538;SITEPOST=0.98995;SVTYPE=DEL_ALU\tGT\t1|0\n12\t15104647\tALU_umary_ALU_9019\tA\t<INS:ME:ALU>\t.\t.\tAC=920;AF=0.183706;AFR_AF=0.1346;AMR_AF=0.2637;AN=5008;CS=ALU_umary;EAS_AF=0.1349;EUR_AF=0.2445;MEINFO=AluUndef,6,278,+;NS=2504;SAS_AF=0.181;SITEPOST=1;SVLEN=272;SVTYPE=ALU;TSD=AAAACATTGAGGAGA\tGT\t1|0\n12\t15608405\tBI_GS_CNV_12_15608405_15613576\tG\t<CN0>\t100\tPASS\tAC=1;AF=0.00019968;AFR_AF=0;AMR_AF=0;AN=5008;CIEND=0,500;CIPOS=-500,0;CS=DEL_union;EAS_AF=0;END=15613576;EUR_AF=0.001;NS=2504;SAS_AF=0;SVTYPE=DEL\tGT\t1|0\n12\t16420132\tUW_VH_25172\tA\t<CN0>\t100\tPASS\tAC=2483;AF=0.495807;AFR_AF=0.4773;AMR_AF=0.4553;AN=5008;CIEND=0,335;CIPOS=-416,0;CS=DEL_union;EAS_AF=0.4931;END=16421288;EUR_AF=0.4006;MC=YL_CN_CDX_2350,UW_VH_10925,YL_CN_GWD_3840,UW_VH_20802,UW_VH_10109,YL_CN_CHS_2828,YL_CN_ITU_2728,YL_CN_KHV_2861,YL_CN_LWK_2641,YL_CN_IBS_2501,SI_BD_12006,YL_CN_CHB_2796,YL_CN_GIH_2178,YL_CN_YRI_3486,YL_CN_CEU_3453,YL_CN_BEB_2330,YL_CN_STU_2745,YL_CN_PUR_3352,UW_VH_1557,YL_CN_JPT_2957,BI_GS_DEL1_B1_P1976_370,YL_CN_ESN_2844;NS=2504;SAS_AF=0.6503;SVTYPE=DEL\tGT\t1|1\n12\t17444827\tBI_GS_DEL1_B1_P1977_343\tC\t<CN0>\t100\tPASS\tAC=2033;AF=0.40595;AFR_AF=0.3245;AMR_AF=0.4035;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.3274;END=17445939;EUR_AF=0.5557;MC=YL_CN_KHV_2862,YL_CN_GBR_2693,SI_BD_12011;NS=2504;SAS_AF=0.4448;SVTYPE=DEL\tGT\t0|1\n12\t19806222\tALU_umary_ALU_9047\tG\t<INS:ME:ALU>\t.\t.\tAC=1921;AF=0.383586;AFR_AF=0.5552;AMR_AF=0.3444;AN=5008;CS=ALU_umary;EAS_AF=0.2778;EUR_AF=0.4056;MEINFO=AluUndef,42,281,+;NS=2504;SAS_AF=0.2658;SITEPOST=1;SVLEN=239;SVTYPE=ALU;TSD=AAGAGGCATTAAGAG\tGT\t1|0\n12\t22047473\tDEL_pindel_35697\tTCTGTTGTTTTGGGGTCCTCACTGTGGATCTTTACTAAAACTGTCAGCATTAATATCCAAAGAAGACTTACTTCCATTTTTTTTTTTTTGAGACACGGTATCA\tT\t.\tPASS\tAC=1439;AF=0.28734;AFR_AF=0.3351;AMR_AF=0.3689;AN=5008;CS=DEL_pindel;EAS_AF=0.1667;END=22047575;EUR_AF=0.2724;NS=2504;SAS_AF=0.3047;SITEPOST=0.9998;SVTYPE=DEL\tGT\t0|1\n12\t22123796\tALU_umary_ALU_9064\tT\t<INS:ME:ALU>\t.\t.\tAC=2711;AF=0.541334;AFR_AF=0.2769;AMR_AF=0.6225;AN=5008;CS=ALU_umary;EAS_AF=0.62;EUR_AF=0.6412;MEINFO=AluYa5,3,279,-;NS=2504;SAS_AF=0.6575;SITEPOST=1;SVLEN=276;SVTYPE=ALU;TSD=TCCCTTCCATTCTT\tGT\t1|1\n12\t23795725\tDEL_pindel_35732\tTAAAAGGTAATTATGGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCATGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAA\tT\t.\tPASS\tAC=726;AF=0.144968;AFR_AF=0.0439;AMR_AF=0.0836;AN=5008;CS=DEL_pindel;EAS_AF=0.1994;END=23796038;EUR_AF=0.1978;MEINFO=AluYa5,1,281,+;NS=2504;SAS_AF=0.2147;SITEPOST=0.9998;SVTYPE=DEL_ALU\tGT\t0|1\n12\t23939446\tBI_GS_DEL1_B2_P1983_661\tT\t<CN0>\t100\tPASS\tAC=736;AF=0.146965;AFR_AF=0.177;AMR_AF=0.0807;AN=5008;CIEND=-30,30;CIPOS=-30,30;CS=DEL_union;EAS_AF=0.1062;END=23940212;EUR_AF=0.1551;MC=BI_GS_DEL1_B5_P1983_1122,UW_VH_2407,BI_GS_DEL1_B2_P1983_662;NS=2504;SAS_AF=0.1871;SVTYPE=DEL\tGT\t0|1\n12\t24460412\tBI_GS_DEL1_B5_P1984_559\tG\t<CN0>\t100\tPASS\tAC=3410;AF=0.680911;AFR_AF=0.3865;AMR_AF=0.7997;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.8522;END=24460701;EUR_AF=0.7306;NS=2504;SAS_AF=0.7669;SVTYPE=DEL\tGT\t0|1\n12\t25462949\tALU_umary_ALU_9083\tG\t<INS:ME:ALU>\t.\t.\tAC=1254;AF=0.250399;AFR_AF=0.0545;AMR_AF=0.2219;AN=5008;CS=ALU_umary;EAS_AF=0.3651;EUR_AF=0.3757;MEINFO=AluUndef,1,269,+;NS=2504;SAS_AF=0.2883;SITEPOST=1;SVLEN=268;SVTYPE=ALU;TSD=AAAGATGCAGGGATGG\tGT\t1|0\n12\t27433987\tDEL_pindel_35796\tTGGCTTTAGCTTTGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCGCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCCC\tT\t.\tPASS\tAC=3065;AF=0.612021;AFR_AF=0.6104;AMR_AF=0.6268;AN=5008;CS=DEL_pindel;EAS_AF=0.5913;END=27434318;EUR_AF=0.6431;MEINFO=AluYa5,1,281,-;NS=2504;SAS_AF=0.593;SITEPOST=0.9899;SVTYPE=DEL_ALU\tGT\t1|0\n12\t27864811\tALU_umary_ALU_9100\tT\t<INS:ME:ALU>\t.\t.\tAC=1795;AF=0.358427;AFR_AF=0.3268;AMR_AF=0.4092;AN=5008;CS=ALU_umary;EAS_AF=0.3611;EUR_AF=0.3748;MEINFO=AluYa5,1,279,-;NS=2504;SAS_AF=0.3456;SITEPOST=1;SVLEN=278;SVTYPE=ALU;TSD=ATAATTGTCTATTTTT\tGT\t1|1\n12\t28274591\tALU_umary_ALU_9105\tA\t<INS:ME:ALU>\t.\t.\tAC=452;AF=0.0902556;AFR_AF=0.0083;AMR_AF=0.0793;AN=5008;CS=ALU_umary;EAS_AF=0.0556;EUR_AF=0.2306;MEINFO=AluUndef,1,263,+;NS=2504;SAS_AF=0.1002;SITEPOST=1;SVLEN=262;SVTYPE=ALU;TSD=AAAGAAAATGA\tGT\t1|0\n12\t29844383\tBI_GS_DEL1_B4_P1989_213\tA\t<CN0>\t100\tPASS\tAC=909;AF=0.18151;AFR_AF=0.1422;AMR_AF=0.2262;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.3165;END=29846440;EUR_AF=0.1402;MC=EM_DL_DEL18305,UW_VH_14077,UW_VH_1560,YL_CN_TSI_2678,YL_CN_FIN_2601;NS=2504;SAS_AF=0.1063;SVTYPE=DEL\tGT\t0|1\n12\t30371300\tBI_GS_DEL1_B1_P1990_361\tG\t<CN0>\t100\tPASS\tAC=2617;AF=0.522564;AFR_AF=0.4251;AMR_AF=0.5951;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.6419;END=30371728;EUR_AF=0.5636;MC=DEL_pindel_35872,UW_VH_943;NS=2504;SAS_AF=0.4376;SVTYPE=DEL\tGT\t1|1\n12\t32358663\tALU_umary_ALU_9130\tT\t<INS:ME:ALU>\t.\t.\tAC=1227;AF=0.245008;AFR_AF=0.2269;AMR_AF=0.3429;AN=5008;CS=ALU_umary;EAS_AF=0.247;EUR_AF=0.2614;MEINFO=AluYa4_5,1,281,-;NS=2504;SAS_AF=0.181;SITEPOST=1;SVLEN=280;SVTYPE=ALU;TSD=TATATGTCAATTTT\tGT\t1|0\n12\t32443055\tDEL_pindel_35922\tAAGCATTCTGAATAACAAGGAGCTCCAACCCCTTATATATAAATGAGGTTACATATAGTAGGTTGAAAGCAGGTTTCCAAAACAACCAATTAGTTTGTATAGCTTC\tA\t.\tPASS\tAC=714;AF=0.142572;AFR_AF=0.1029;AMR_AF=0.0908;AN=5008;CS=DEL_pindel;EAS_AF=0.2192;END=32443160;EUR_AF=0.1193;NS=2504;SAS_AF=0.1779;SITEPOST=1;SVTYPE=DEL\tGT\t0|1\n12\t32963599\tDEL_pindel_35945\tTAGAATAAACATTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC\tT\t.\tPASS\tAC=2879;AF=0.57488;AFR_AF=0.4985;AMR_AF=0.5461;AN=5008;CS=DEL_pindel;EAS_AF=0.6052;END=32963914;EUR_AF=0.6312;MEINFO=AluYa4b,1,281,-;NS=2504;SAS_AF=0.6094;SITEPOST=0.9946;SVTYPE=DEL_ALU\tGT\t1|1\n12\t33296520\tUW_VH_3455\tG\t<CN0>\t100\tPASS\tAC=770;AF=0.153754;AFR_AF=0.0688;AMR_AF=0.2061;AN=5008;CIEND=0,382;CIPOS=-412,0;CS=DEL_union;EAS_AF=0.119;END=33307372;EUR_AF=0.2207;MC=UW_VH_18532,YL_CN_FIN_2609,BI_GS_DEL1_B2_P1993_188,EM_DL_DEL18419,UW_VH_2544,SI_BD_12099;NS=2504;SAS_AF=0.1984;SVTYPE=DEL\tGT\t0|1\n12\t33325803\tL1_umary_LINE1_2267\tC\t<INS:ME:LINE1>\t.\t.\tAC=635;AF=0.126797;AFR_AF=0.0151;AMR_AF=0.1744;AN=5008;CS=L1_umary;EAS_AF=0.1091;EUR_AF=0.2058;MEINFO=LINE1,1,5997,-;NS=2504;SAS_AF=0.181;SITEPOST=1;SVLEN=5996;SVTYPE=LINE1;TSD=CTTGCTTTTC\tGT\t0|1\n12\t40673027\tALU_umary_ALU_9158\tT\t<INS:ME:ALU>\t.\t.\tAC=1536;AF=0.306709;AFR_AF=0.2277;AMR_AF=0.2248;AN=5008;CS=ALU_umary;EAS_AF=0.2808;EUR_AF=0.4016;MEINFO=AluYc1,4,281,-;NS=2504;SAS_AF=0.4008;SITEPOST=1;SVLEN=277;SVTYPE=ALU;TSD=GCCAATAGTTTACTTTTT\tGT\t0|1\n12\t40832796\tALU_umary_ALU_9160\tC\t<INS:ME:ALU>\t.\t.\tAC=1484;AF=0.296326;AFR_AF=0.2194;AMR_AF=0.3055;AN=5008;CS=ALU_umary;EAS_AF=0.2728;EUR_AF=0.329;MEINFO=AluUndef,5,281,+;NS=2504;SAS_AF=0.3845;SITEPOST=1;SVLEN=276;SVTYPE=ALU;TSD=GAAAAAATTTTAC\tGT\t0|1\n12\t41183193\tUW_VH_951\tA\t<CN0>\t100\tPASS\tAC=4491;AF=0.896765;AFR_AF=0.8343;AMR_AF=0.9092;AN=5008;CIEND=0,459;CIPOS=-537,0;CS=DEL_union;EAS_AF=0.9058;END=41183503;EUR_AF=0.9175;MC=SI_BD_12142;NS=2504;SAS_AF=0.9417;SVTYPE=DEL\tGT\t1|1\n12\t41757437\tDEL_pindel_35982\tTGCTAGTTTGGAGATAAATCATATTATGGCCAAGGGTCATGATGGCAGGAGTAATCAGAGGTGTTCTTGTGTTGTGATAAGGGTGGAGA\tT\t.\tPASS\tAC=3721;AF=0.743011;AFR_AF=0.6233;AMR_AF=0.8631;AN=5008;CS=DEL_pindel;EAS_AF=0.7817;END=41757525;EUR_AF=0.7942;NS=2504;SAS_AF=0.727;SITEPOST=0.9992;SVTYPE=DEL\tGT\t1|1\n12\t42238053\tDEL_pindel_35996\tAGATGCTACATATTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTCATTTATTTTTTTTTTATTTTATTTTATTTTTTTTATTATACTCTAAGTTTTAGGGTACATGTGCACATTGTGCAGGTTAGTTACATATGTATACATGTGCCATGCTGGTGCGCTGCACCCACTAATGTGTCATCTAGCATTAGGTATATCTCCCAATACTATCCCTCCCCCCTCCCCCAACCCCACCACAGTCCCCAGAGTGTGATATTCCCCTTCCTGTGTCCATGTGATCTCATTGTTCAATTCCCACCTATGAGTGAGAATATGCGGTGTTTGGTTTTTTGTTCTTGCGATAGTTTACTGAGAATGATGGTTTCCAATTTCAGCCATGTCCCTACAAAGGATATGAACTCATCATTTTTTATGGCTGCATAGTATTCCATGGTGTATATGTGCCACATTTTCTTAATCCAGTCTATCATTGTTGGACATTTGGGTTGGTTCCAAGTCTTTGCTATTGTGAATAGTGCTGCAATAAACATACGTGTGCATGTGTCTTTATAGCAGCATGATTTATACTCATTTGGGTATATACCCAGTAATGGGATGGCTGGGTCAAATGGTATTTCTAGTTCTAGATCCCTGAGGAATCGCCACACTGACTTCCACAATGGTTGAACTAGTTTACAGTCCCACCAACAGTGTAAAAGTGTTCCTATTTCTCCGCATCCTCTCCAGCACCTGTTGTTTCCTGACTTTTTAATGATTGCCATTCTAACTGGTGTGAGATGATATCTCATAGTGGTTTTGATTTGCATTTCTCTGATGGCCAGTGATGATG\tA\t.\tPASS\tAC=2670;AF=0.533147;AFR_AF=0.3684;AMR_AF=0.5793;AN=5008;CS=DEL_pindel;EAS_AF=0.6131;END=42238877;EUR_AF=0.5865;MEINFO=LINE1,5276,6019,-;NS=2504;SAS_AF=0.5859;SITEPOST=0.9834;SVTYPE=DEL_LINE1\tGT\t0|1\n12\t43256994\tL1_umary_LINE1_2278\tT\t<INS:ME:LINE1>\t.\t.\tAC=2813;AF=0.561701;AFR_AF=0.2572;AMR_AF=0.5476;AN=5008;CS=L1_umary;EAS_AF=0.6319;EUR_AF=0.7783;MEINFO=LINE1,4890,6012,-;NS=2504;SAS_AF=0.6881;SITEPOST=1;SVLEN=1122;SVTYPE=LINE1;TSD=TTTAATTCTTTTTAATATTTTT\tGT\t0|1\n12\t43717940\tALU_umary_ALU_9177\tT\t<INS:ME:ALU>\t.\t.\tAC=2262;AF=0.451677;AFR_AF=0.3434;AMR_AF=0.4323;AN=5008;CS=ALU_umary;EAS_AF=0.6577;EUR_AF=0.3807;MEINFO=AluYb11,1,281,-;NS=2504;SAS_AF=0.4724;SITEPOST=1;SVLEN=280;SVTYPE=ALU;TSD=CCAAATATTCTT\tGT\t1|0\n12\t45011174\tDEL_pindel_36051\tTGAAAAAGCAGTTGTGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAACACACACAAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCTGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAA\tT\t.\tPASS\tAC=670;AF=0.133786;AFR_AF=0.3321;AMR_AF=0.0893;AN=5008;CS=DEL_pindel;EAS_AF=0.0298;END=45011496;EUR_AF=0.1143;MEINFO=AluYa4_4,1,281,+;NS=2504;SAS_AF=0.0245;SITEPOST=0.9995;SVTYPE=DEL_ALU\tGT\t1|0\n12\t45131147\tALU_umary_ALU_9187\tT\t<INS:ME:ALU>\t.\t.\tAC=509;AF=0.101637;AFR_AF=0.0303;AMR_AF=0.0648;AN=5008;CS=ALU_umary;EAS_AF=0.1508;EUR_AF=0.1451;MEINFO=AluYa5,1,281,-;NS=2504;SAS_AF=0.1288;SITEPOST=1;SVLEN=280;SVTYPE=ALU;TSD=CAATAACTTTTTT\tGT\t0|1\n12\t45419555\tALU_umary_ALU_9188\tG\t<INS:ME:ALU>\t.\t.\tAC=2730;AF=0.545128;AFR_AF=0.5136;AMR_AF=0.5216;AN=5008;CS=ALU_umary;EAS_AF=0.5893;EUR_AF=0.4612;MEINFO=AluUndef,1,281,+;NS=2504;SAS_AF=0.6452;SITEPOST=1;SVLEN=280;SVTYPE=ALU;TSD=AATAGAAAGATCTG\tGT\t1|1\n12\t45903207\tUW_VH_955\tG\t<CN0>\t100\tPASS\tAC=1505;AF=0.300519;AFR_AF=0.4032;AMR_AF=0.3271;AN=5008;CIEND=0,517;CIPOS=-490,0;CS=DEL_union;EAS_AF=0.006;END=45909947;EUR_AF=0.5726;MC=YL_CN_GIH_2209,BI_GS_CNV_12_45903196_45909818,EM_DL_DEL18876,SI_BD_12161;NS=2504;SAS_AF=0.1667;SVTYPE=DEL\tGT\t1|0\n12\t45948359\tDEL_pindel_36070\tAGAAACTGGAAACATTGCGCAGGGGCCATGCTAATCTTCTCTGTATCGTTCCAATTTTAGTATATGTGCTGCCGAAGCGAGCACAT\tA\t.\tPASS\tAC=709;AF=0.141573;AFR_AF=0.0204;AMR_AF=0.2752;AN=5008;CS=DEL_pindel;EAS_AF=0.006;END=45948444;EUR_AF=0.3698;NS=2504;SAS_AF=0.1155;SITEPOST=0.996;SVTYPE=DEL\tGT\t0|1\n12\t46046309\tALU_umary_ALU_9192\tA\t<INS:ME:ALU>\t.\t.\tAC=516;AF=0.103035;AFR_AF=0.1467;AMR_AF=0.1081;AN=5008;CS=ALU_umary;EAS_AF=0.0397;EUR_AF=0.1421;MEINFO=AluUndef,1,280,+;NS=2504;SAS_AF=0.0654;SITEPOST=1;SVLEN=279;SVTYPE=ALU;TSD=AAAAGCAATTATA\tGT\t0|1\n12\t47075350\tDEL_pindel_36099\tTAAGAAAGTATCAGTCAGGCCGGGCGCGGTGGCTCACGTCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACGCGGTGAAACCCCATCTCTACTAAAAAAAAAATACAAAAAATTAGCCGGGCGTGGTGGCGGGCGCCTGTAGTCCCAGCTACGCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCGCGCCACTGCACTCCAGCCTGGGCGACAGAGCAAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA\tT\t.\tPASS\tAC=3955;AF=0.789736;AFR_AF=0.7784;AMR_AF=0.7882;AN=5008;CS=DEL_pindel;EAS_AF=0.7619;END=47075698;EUR_AF=0.8052;MEINFO=AluYf1,1,281,+;NS=2504;SAS_AF=0.819;SITEPOST=0.9604;SVTYPE=DEL_ALU\tGT\t0|1\n12\t49709229\tBI_GS_DEL1_B2_P2009_435\tC\t<CN0>\t100\tPASS\tAC=84;AF=0.0167732;AFR_AF=0.0053;AMR_AF=0.0245;AN=5008;CIEND=-13,13;CIPOS=-13,13;CS=DEL_union;EAS_AF=0.0228;END=49710582;EUR_AF=0.0179;MC=UW_VH_1856;NS=2504;SAS_AF=0.0194;SVTYPE=DEL\tGT\t0|1\n12\t54245407\tDEL_pindel_36225\tTAAAAAGTTAGCTTCAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGCGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGAGACTGCGCCACTGCAGTCCGCAGTCCGGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAA\tT\t.\tPASS\tAC=3029;AF=0.604832;AFR_AF=0.7035;AMR_AF=0.5778;AN=5008;CS=DEL_pindel;EAS_AF=0.3115;END=54245696;EUR_AF=0.7247;MEINFO=AluYb6_2,23,281,+;NS=2504;SAS_AF=0.6697;SITEPOST=0.9825;SVTYPE=DEL_ALU\tGT\t1|1\n12\t58028003\tBI_GS_DEL1_B3_P2018_2\tA\t<CN0>\t100\tPASS\tAC=1188;AF=0.23722;AFR_AF=0.3374;AMR_AF=0.2882;AN=5008;CIEND=0,1;CIPOS=0,1;CS=DEL_union;EAS_AF=0.1319;END=58029239;EUR_AF=0.2256;MC=YL_CN_GWD_3915,SI_BD_12226,UW_VH_958;NS=2504;SAS_AF=0.1861;SVTYPE=DEL\tGT\t0|1\n12\t58083278\tALU_umary_ALU_9233\tG\t<INS:ME:ALU>\t.\t.\tAC=1220;AF=0.24361;AFR_AF=0.2239;AMR_AF=0.17;AN=5008;CS=ALU_umary;EAS_AF=0.2996;EUR_AF=0.1849;MEINFO=AluUndef,4,281,+;NS=2504;SAS_AF=0.3252;SITEPOST=1;SVLEN=277;SVTYPE=ALU;TSD=AAAAAACATTATAGTTTGG\tGT\t1|0\n12\t60521816\tBI_GS_DEL1_B5_P2020_571\tC\t<CN0>\t100\tPASS\tAC=1971;AF=0.39357;AFR_AF=0.1097;AMR_AF=0.621;AN=5008;CIEND=0,1;CIPOS=0,1;CS=DEL_union;EAS_AF=0.5337;END=60525034;EUR_AF=0.4722;MC=YL_CN_YRI_3570,UW_VH_959,EM_DL_DEL19481,UW_VH_3034,UW_VH_10408,UW_VH_25248,UW_VH_24935,SI_BD_12235,UW_VH_16742,UW_VH_19222;NS=2504;SAS_AF=0.3906;SVTYPE=DEL\tGT\t1|1\n12\t61053825\tALU_umary_ALU_9257\tT\t<INS:ME:ALU>\t.\t.\tAC=1350;AF=0.269569;AFR_AF=0.4281;AMR_AF=0.2305;AN=5008;CS=ALU_umary;EAS_AF=0.2728;EUR_AF=0.166;MEINFO=AluUndef,26,270,+;NS=2504;SAS_AF=0.1861;SITEPOST=1;SVLEN=244;SVTYPE=ALU;TSD=AAGAATATTT\tGT\t1|1\n12\t62295031\tDEL_pindel_36368\tTCAATTTCACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTATTATACTCTAAGTTTTAGGGTACATGTGCATATTGTGCAGGTTAGTTACATATGTATACATGTGCCATGCTGGTGCGCTGCACCCACTAATGTGTCATCTAGCATTAGGTATATCTCCCAATGCTATCCCTCCCCCCTCCCCCGAC\tT\t.\tPASS\tAC=3476;AF=0.694089;AFR_AF=0.7587;AMR_AF=0.611;AN=5008;CS=DEL_pindel;EAS_AF=0.753;END=62295217;EUR_AF=0.6461;NS=2504;SAS_AF=0.6544;SITEPOST=0.9824;SVTYPE=DEL\tGT\t1|0\n12\t71532784\tCINV_delly_INV00023088\tT\t<INV>\t.\tPASS\tAC=1545;AF=0.308506;AFR_AF=0.4077;AMR_AF=0.281;AN=5008;CIEND=-62,62;CIPOS=-62,62;CS=CINV_delly;EAS_AF=0.2014;END=71533816;EUR_AF=0.3698;IMPRECISE;NS=2504;SAS_AF=0.2413;SVTYPE=INV\tGT\t1|0\n12\t71602363\tBI_GS_DEL1_B2_P2031_416\tT\t<CN0>\t100\tPASS\tAC=2209;AF=0.441094;AFR_AF=0.7088;AMR_AF=0.3689;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.0794;END=71604480;EUR_AF=0.497;MC=UW_VH_962,EM_DL_DEL19776,YL_CN_ACB_3215,YL_CN_KHV_2936,YL_CN_LWK_2729;NS=2504;SAS_AF=0.4458;SVTYPE=DEL\tGT\t1|0\n12\t72356517\tYL_CN_BEB_2395\tT\t<CN0>\t100\tPASS\tAC=3786;AF=0.75599;AFR_AF=0.6967;AMR_AF=0.7248;AN=5008;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0.7917;END=72358157;EUR_AF=0.8231;MC=UW_VH_10807,UW_VH_25109,UW_VH_20952,YL_CN_CHB_2855,YL_CN_CEU_3533,YL_CN_CHS_2920,UW_VH_25377,YL_CN_JPT_3026,UW_VH_13551,UW_VH_17570,BI_GS_DEL1_B1_P2032_280,YL_CN_CLM_2462,YL_CN_ESN_2917,UW_VH_9060,YL_CN_LWK_2731,UW_VH_9511,UW_VH_25209,YL_CN_GIH_2227,UW_VH_16962,UW_VH_4343,UW_VH_13805,YL_CN_PEL_2567,SI_BD_12291,UW_VH_25266,YL_CN_IBS_2576,YL_CN_MSL_2638,UW_VH_25300,YL_CN_YRI_3588,UW_VH_12570,UW_VH_14373,YL_CN_PJL_2940,UW_VH_18734,UW_VH_11577,EM_DL_DEL10236167,YL_CN_ITU_2808,YL_CN_GBR_2774,UW_VH_1340,UW_VH_5640,YL_CN_PUR_3445;NS=2504;SAS_AF=0.7526;SVTYPE=DEL\tGT\t1|1\n12\t72739802\tDEL_pindel_36548\tTCATGGAATGATATGAAAAATTTGCATTTGCTTTTCAAAGGTAGTGACACAGAA\tT\t.\tPASS\tAC=1023;AF=0.204273;AFR_AF=0.0318;AMR_AF=0.1888;AN=5008;CS=DEL_pindel;EAS_AF=0.0853;END=72739855;EUR_AF=0.3907;NS=2504;SAS_AF=0.3793;SITEPOST=0.9999;SVTYPE=DEL\tGT\t0|1\n12\t74104692\tUW_VH_1562\tT\t<CN0>\t100\tPASS\tAC=1153;AF=0.230232;AFR_AF=0.3956;AMR_AF=0.183;AN=5008;CIEND=0,303;CIPOS=-478,0;CS=DEL_union;EAS_AF=0.0546;END=74105402;EUR_AF=0.2256;MC=SI_BD_12297,BI_GS_DEL1_B2_P2034_82;NS=2504;SAS_AF=0.226;SVTYPE=DEL\tGT\t0|1\n12\t74571808\tDEL_pindel_36591\tTAGAGGAGTTGTGGAAGACTGTATTAGGCAAAATGGGGTGGCAAAATTGAGTGGAGGAGATCAAGTTTGAGATGTCTGTTAACTATCCAAATGGATTTGGTAGGTAGGTGTATTAGTCCATTCTCATGCTGCTATAGGACATACCCAAGACTGGGTATTTATAAAGGAAAGAGGATTAACTGATAACACAGTTCTGCAGGGCTGGGAAGGCCTC\tT\t.\tPASS\tAC=572;AF=0.114217;AFR_AF=0.09;AMR_AF=0.1441;AN=5008;CS=DEL_pindel;EAS_AF=0.0536;END=74572021;EUR_AF=0.1849;NS=2504;SAS_AF=0.1155;SITEPOST=1;SVTYPE=DEL\tGT\t1|1\n12\t75320691\tALU_umary_ALU_9337\tT\t<INS:ME:ALU>\t.\t.\tAC=1220;AF=0.24361;AFR_AF=0.4002;AMR_AF=0.1945;AN=5008;CS=ALU_umary;EAS_AF=0.0833;EUR_AF=0.2475;MEINFO=AluUndef,3,279,-;NS=2504;SAS_AF=0.228;SITEPOST=1;SVLEN=276;SVTYPE=ALU;TSD=GAAACCATCATTCTT\tGT\t1|0\n12\t75931101\tALU_umary_ALU_9345\tT\t<INS:ME:ALU>\t.\t.\tAC=1480;AF=0.295527;AFR_AF=0.1248;AMR_AF=0.3501;AN=5008;CS=ALU_umary;EAS_AF=0.3304;EUR_AF=0.3728;MEINFO=AluYg6,1,281,-;NS=2504;SAS_AF=0.3722;SITEPOST=1;SVLEN=280;SVTYPE=ALU;TSD=GAAGATTATTTTCTTT\tGT\t0|1\n12\t77311762\tALU_umary_ALU_9351\tT\t<INS:ME:ALU>\t.\t.\tAC=144;AF=0.028754;AFR_AF=0.0567;AMR_AF=0.0187;AN=5008;CS=ALU_umary;EAS_AF=0.0119;EUR_AF=0.0358;MEINFO=AluUndef,1,274,-;NS=2504;SAS_AF=0.0082;SITEPOST=1;SVLEN=273;SVTYPE=ALU;TSD=GGACCAAACTTGTTTTT\tGT\t1|0\n12\t77908656\tDEL_pindel_36668\tTATATTTAATATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGCCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC\tT\t.\tPASS\tAC=1314;AF=0.26238;AFR_AF=0.3691;AMR_AF=0.3559;AN=5008;CS=DEL_pindel;EAS_AF=0.0347;END=77908979;EUR_AF=0.3171;MEINFO=AluYa5a1,1,281,-;NS=2504;SAS_AF=0.2301;SITEPOST=0.9991;SVTYPE=DEL_ALU\tGT\t1|0\n12\t82139688\tUW_VH_24823\tC\t<CN0>\t100\tPASS\tAC=787;AF=0.157149;AFR_AF=0.0083;AMR_AF=0.2133;AN=5008;CIEND=0,367;CIPOS=-298,0;CS=DEL_union;EAS_AF=0.246;END=82144323;EUR_AF=0.2157;MC=YL_CN_MXL_2401,UW_VH_5519,SI_BD_12335,UW_VH_19539,UW_VH_2410,UW_VH_17973,BI_GS_DEL1_B5_P2042_137,EM_DL_DEL19962,UW_VH_5865;NS=2504;SAS_AF=0.1667;SVTYPE=DEL\tGT\t1|0\n12\t83844044\tDEL_pindel_36790\tTAGAACAAGCTCTTAAACATACGTGTGCATGTGTCTTTATAGCAGCATGATTTATACTCATTTGGGTATATACCCAGTAATGGGATGGCTGGGTCATTGCGGCACTATTCACAATAGCAAAGACTTGGAACCAACCCAAATGTCCAACAATGATAGACTGGATTAAGAAAATGTGGCACATATACACCATGGAATACTATGCAGCCATAAAAAATGATGAGTTCATATCCTTTGTAGGGACATGGATGAAATTGGAAACCATCATTCTCAGTAAACTATCGCAAGAACAAAAAACCAAACACCGCATATTCTCACTCATAGGTGGGAATTGAACAATGAGATCACATGGACACAGGAAGGGGAATATCACACTCTGGGGACTGTGGTGGGGTCGGGGAAGGGGGGAGGGATAGCATTGGGAGATATACCTAATGCTAGATGACACATTAGTGGGTGCAGCGCACCAGCATGGCACATGTATACATATGTAACTAACCTGCACAATGTGCACATGTACCCTAAAACTTAGAGTATAATAAAAAAAAAAAAAAAAAAAAAAAAAAAA\tT\t.\tPASS\tAC=2593;AF=0.517772;AFR_AF=0.5946;AMR_AF=0.5432;AN=5008;CS=DEL_pindel;EAS_AF=0.4821;END=83844608;EUR_AF=0.4801;MEINFO=LINE1,5499,5581,+;NS=2504;SAS_AF=0.4714;SITEPOST=0.9909;SVTYPE=DEL_LINE1\tGT\t1|1\n12\t84042269\tDEL_pindel_36798\tTAAAAAAAACAAATTTGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCATGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAA\tT\t.\tPASS\tAC=1755;AF=0.350439;AFR_AF=0.4334;AMR_AF=0.3746;AN=5008;CS=DEL_pindel;EAS_AF=0.1855;END=84042582;EUR_AF=0.3847;MEINFO=AluYa5,1,281,+;NS=2504;SAS_AF=0.3558;SITEPOST=0.9992;SVTYPE=DEL_ALU\tGT\t0|1\n12\t84086124\tALU_umary_ALU_9388\tT\t<INS:ME:ALU>\t.\t.\tAC=992;AF=0.198083;AFR_AF=0.1248;AMR_AF=0.2896;AN=5008;CS=ALU_umary;EAS_AF=0.0952;EUR_AF=0.2972;MEINFO=AluYb8,1,271,-;NS=2504;SAS_AF=0.2362;SITEPOST=1;SVLEN=270;SVTYPE=ALU;TSD=CACCAGTTTTTT\tGT\t1|0\n12\t84484484\tDEL_pindel_36802\tTAACTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGTCGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC\tT\t.\tPASS\tAC=3974;AF=0.79353;AFR_AF=0.8797;AMR_AF=0.8098;AN=5008;CS=DEL_pindel;EAS_AF=0.7391;END=84484800;EUR_AF=0.7386;MEINFO=AluYb6_2,1,281,-;NS=2504;SAS_AF=0.7781;SITEPOST=0.9916;SVTYPE=DEL_ALU\tGT\t0|1\n12\t84593115\tBI_GS_DEL1_B1_P2044_422\tG\t<CN0>\t100\tPASS\tAC=653;AF=0.130391;AFR_AF=0.056;AMR_AF=0.2161;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.0565;END=84596020;EUR_AF=0.2266;MC=YL_CN_GWD_3950,UW_VH_2328,UW_VH_3035,UW_VH_13890,YL_CN_CDX_2420,SI_BD_12353;NS=2504;SAS_AF=0.1472;SVTYPE=DEL\tGT\t1|1\n12\t86523315\tDEL_pindel_36845\tACACAATCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACACGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGC\tA\t.\tPASS\tAC=3464;AF=0.691693;AFR_AF=0.7292;AMR_AF=0.6138;AN=5008;CS=DEL_pindel;EAS_AF=0.7956;END=86523635;EUR_AF=0.5457;MEINFO=AluYa5,2,281,-;NS=2504;SAS_AF=0.7393;SITEPOST=0.9823;SVTYPE=DEL_ALU\tGT\t1|0\n12\t86653628\tALU_umary_ALU_9399\tA\t<INS:ME:ALU>\t.\t.\tAC=2036;AF=0.40655;AFR_AF=0.4107;AMR_AF=0.3732;AN=5008;CS=ALU_umary;EAS_AF=0.4712;EUR_AF=0.3688;MEINFO=AluUndef,1,280,-;NS=2504;SAS_AF=0.3967;SITEPOST=1;SVLEN=279;SVTYPE=ALU;TSD=null\tGT\t1|0\n12\t88338170\tALU_umary_ALU_9409\tG\t<INS:ME:ALU>\t.\t.\tAC=2131;AF=0.425519;AFR_AF=0.1944;AMR_AF=0.5418;AN=5008;CS=ALU_umary;EAS_AF=0.4871;EUR_AF=0.5716;MEINFO=AluYa4_5,6,269,+;NS=2504;SAS_AF=0.4417;SITEPOST=1;SVLEN=263;SVTYPE=ALU;TSD=AAAAGAAAATG\tGT\t0|1\n12\t94358328\tDEL_pindel_36969\tTAGAATTAGGAGCTGGGGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAAGTAGCCGGGCGTGGTAGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCGCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAA\tT\t.\tPASS\tAC=2893;AF=0.577676;AFR_AF=0.5348;AMR_AF=0.5965;AN=5008;CS=DEL_pindel;EAS_AF=0.7212;END=94358640;EUR_AF=0.4781;MEINFO=AluYc1,1,281,+;NS=2504;SAS_AF=0.5767;SITEPOST=0.9938;SVTYPE=DEL_ALU\tGT\t0|1\n12\t95244023\tBI_GS_DEL1_B3_P2055_4\tA\t<CN0>\t100\tPASS\tAC=2823;AF=0.563698;AFR_AF=0.3321;AMR_AF=0.6859;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.5198;END=95244449;EUR_AF=0.7276;MC=DEL_pindel_36990;NS=2504;SAS_AF=0.6667;SVTYPE=DEL\tGT\t1|1\n12\t95344056\tDEL_pindel_36995\tTGGCAACAATTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCAGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC\tT\t.\tPASS\tAC=1810;AF=0.361422;AFR_AF=0.413;AMR_AF=0.3473;AN=5008;CS=DEL_pindel;EAS_AF=0.2837;END=95344366;EUR_AF=0.3668;MEINFO=AluYa5,1,281,-;NS=2504;SAS_AF=0.3763;SITEPOST=0.9988;SVTYPE=DEL_ALU\tGT\t0|1\n12\t96010454\tBI_GS_DEL1_B1_P2056_4\tC\t<CN0>\t100\tPASS\tAC=1732;AF=0.345847;AFR_AF=0.4047;AMR_AF=0.33;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.3244;END=96012414;EUR_AF=0.3121;MC=EM_DL_DEL10245981,YL_CN_MXL_2417,UW_VH_967,UW_VH_8321;NS=2504;SAS_AF=0.3344;SVTYPE=DEL\tGT\t0|1\n12\t96233490\tYL_CN_PUR_3473\tT\t<CN0>\t100\tPASS\tAC=4160;AF=0.830671;AFR_AF=0.8911;AMR_AF=0.8213;AN=5008;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0.875;END=96236776;EUR_AF=0.7753;MC=SI_BD_12401;NS=2504;SAS_AF=0.7669;SVTYPE=DEL\tGT\t1|1\n12\t97495358\tALU_umary_ALU_9450\tG\t<INS:ME:ALU>\t.\t.\tAC=1618;AF=0.323083;AFR_AF=0.2088;AMR_AF=0.3199;AN=5008;CS=ALU_umary;EAS_AF=0.379;EUR_AF=0.3549;MEINFO=AluYb8,1,280,+;NS=2504;SAS_AF=0.3896;SITEPOST=1;SVLEN=279;SVTYPE=ALU;TSD=AAAAACAAATGTAG\tGT\t1|0\n12\t102102410\tUW_VH_8768\tG\t<CN0>\t100\tPASS\tAC=440;AF=0.0878594;AFR_AF=0.0174;AMR_AF=0.1599;AN=5008;CIEND=0,371;CIPOS=-310,0;CS=DEL_union;EAS_AF=0.1161;END=102107115;EUR_AF=0.1133;MC=UW_VH_5379,UW_VH_2253,YL_CN_ESN_2947,UW_VH_11766,BI_GS_DEL1_B1_P2062_88,UW_VH_17641,EM_DL_DEL20945;NS=2504;SAS_AF=0.0767;SVTYPE=DEL\tGT\t1|0\n12\t102314060\tDEL_pindel_37110\tTAAAAAGAGCACTTTCTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCCGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGC\tT\t.\tPASS\tAC=1638;AF=0.327077;AFR_AF=0.5076;AMR_AF=0.232;AN=5008;CS=DEL_pindel;EAS_AF=0.3016;END=102314162;EUR_AF=0.1879;MEINFO=AluYb8,211,282,-;NS=2504;SAS_AF=0.32;SITEPOST=0.9973;SVTYPE=DEL_ALU\tGT\t1|0\n12\t106890961\tALU_umary_ALU_9498\tT\t<INS:ME:ALU>\t.\t.\tAC=1197;AF=0.239018;AFR_AF=0.0333;AMR_AF=0.2594;AN=5008;CS=ALU_umary;EAS_AF=0.5;EUR_AF=0.2157;MEINFO=AluYa5a2,1,281,-;NS=2504;SAS_AF=0.2577;SITEPOST=1;SVLEN=280;SVTYPE=ALU;TSD=GTGTTAGCGTATTTT\tGT\t0|1\n12\t111976291\tUW_VH_2115\tA\t<CN0>\t100\tPASS\tAC=190;AF=0.0379393;AFR_AF=0.0038;AMR_AF=0.0461;AN=5008;CIEND=0,283;CIPOS=-301,0;CS=DEL_union;EAS_AF=0;END=111980000;EUR_AF=0.1064;MC=BI_GS_DEL1_B5_P2071_1059,YL_CN_TSI_2821,SI_BD_12472;NS=2504;SAS_AF=0.047;SVTYPE=DEL\tGT\t0|1\n12\t115023765\tDEL_pindel_37371\tGCTGAGGTGGGCAGATCACCTGAGGTCAGGAGTTTGAGACCAGCCTGGCCAACATGGTGAAACC\tG\t.\tPASS\tAC=4319;AF=0.86242;AFR_AF=0.6188;AMR_AF=0.9395;AN=5008;CS=DEL_pindel;EAS_AF=0.9921;END=115023828;EUR_AF=0.9374;NS=2504;SAS_AF=0.9264;SITEPOST=1;SVTYPE=DEL\tGT\t1|1\n12\t122748410\tDUP_gs_CNV_12_122748410_122758684\tA\t<CN2>\t.\tPASS\tAC=3;AF=0.00059904;AFR_AF=0;AMR_AF=0;AN=5008;CS=DUP_gs;EAS_AF=0;END=122758684;EUR_AF=0.003;NS=2504;SAS_AF=0;SITEPOST=0.9976;SVTYPE=DUP\tGT\t1|0\n12\t122947416\tDEL_pindel_37516\tGACAGAGCGAGACTCCATCTCAAAAAAAAAAAAAAAAAAAAAAAGAAAGAA\tG\t.\tPASS\tAC=2249;AF=0.449081;AFR_AF=0.2481;AMR_AF=0.4942;AN=5008;CS=DEL_pindel;EAS_AF=0.381;END=122947466;EUR_AF=0.6332;NS=2504;SAS_AF=0.5695;SITEPOST=0.9995;SVTYPE=DEL\tGT\t0|1\n12\t123010338\tDEL_pindel_37517\tTCAACGAAGAGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCACCCAGGCTGGAGTGCAGTGGCGGGATCTCGGTTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGTCCGCCACTACGCCCGGCTAATTTTTTTGTATTTTTAGTAGAGACAGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGC\tT\t.\tPASS\tAC=3389;AF=0.676717;AFR_AF=0.7375;AMR_AF=0.5706;AN=5008;CS=DEL_pindel;EAS_AF=0.7312;END=123010667;EUR_AF=0.6163;MEINFO=AluYa5,2,281,-;NS=2504;SAS_AF=0.6759;SITEPOST=0.985;SVTYPE=DEL_ALU\tGT\t1|1\n12\t124795816\tDEL_pindel_37570\tTCTGCTATTCTGATCAGCTTCCTGTGCCCCTCGACAGGCCTGGCCAGCTCCCACCTGTGTGTTCCTCCCTGGCAGGTGTGCCACAGACACAGGTGTGGTGGGGTCTCTACCCCTCTGGAGG\tT\t.\tPASS\tAC=997;AF=0.199081;AFR_AF=0.2511;AMR_AF=0.0893;AN=5008;CS=DEL_pindel;EAS_AF=0.0883;END=124795936;EUR_AF=0.1491;NS=2504;SAS_AF=0.3722;SITEPOST=0.9999;SVTYPE=DEL\tGT\t0|1\n12\t127660426\tDEL_pindel_37648\tTAAAAACTCATTGCTTCGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATTGAGACCATCCCGGCTAAAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAA\tT\t.\tPASS\tAC=3582;AF=0.715256;AFR_AF=0.6891;AMR_AF=0.696;AN=5008;CS=DEL_pindel;EAS_AF=0.7242;END=127660752;EUR_AF=0.7545;MEINFO=AluYa5,1,281,+;NS=2504;SAS_AF=0.7147;SITEPOST=0.9481;SVTYPE=DEL_ALU\tGT\t1|1\n12\t127947266\tDEL_pindel_37657\tAGAAAGGTAAATCAATGACTTCAGGATGTCAGGGCAAACAGGATAGTGGATAG\tA\t.\tPASS\tAC=2136;AF=0.426518;AFR_AF=0.289;AMR_AF=0.5317;AN=5008;CS=DEL_pindel;EAS_AF=0.6141;END=127947318;EUR_AF=0.3449;NS=2504;SAS_AF=0.4284;SITEPOST=0.9998;SVTYPE=DEL\tGT\t1|1\n12\t128037977\tDEL_pindel_37660\tTCTGTTTCTTTTCTTCTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCACTCTTTCGCCCAAGCTGGACTGCAGTGGCGCTATCCCGGCTCACTGCAAGCTCCGCCTCTTGGGTTCATGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGATTACAGGCGCCCACCACCACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCAGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCTGGC\tT\t.\tPASS\tAC=1203;AF=0.240216;AFR_AF=0.0885;AMR_AF=0.2767;AN=5008;CS=DEL_pindel;EAS_AF=0.3056;END=128038294;EUR_AF=0.3111;MEINFO=AluYb,2,281,-;NS=2504;SAS_AF=0.2791;SITEPOST=0.9996;SVTYPE=DEL_ALU\tGT\t0|1\n12\t128932242\tDEL_pindel_37675\tTTCAAGTGCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCCGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCAGAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGG\tT\t.\tPASS\tAC=1024;AF=0.204473;AFR_AF=0.3449;AMR_AF=0.1916;AN=5008;CS=DEL_pindel;EAS_AF=0.1776;END=128932541;EUR_AF=0.1441;MEINFO=AluYb5,30,281,-;NS=2504;SAS_AF=0.1135;SITEPOST=0.9999;SVTYPE=DEL_ALU\tGT\t1|0\n12\t130060287\tDEL_pindel_37729\tGCAGATAGATACATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCTGAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC\tG\t.\tPASS\tAC=3358;AF=0.670527;AFR_AF=0.6278;AMR_AF=0.6916;AN=5008;CS=DEL_pindel;EAS_AF=0.7371;END=130060618;EUR_AF=0.6531;MEINFO=AluYa4b,1,281,-;NS=2504;SAS_AF=0.6626;SITEPOST=0.9767;SVTYPE=DEL_ALU\tGT\t0|1\n12\t130455055\tALU_umary_ALU_9581\tC\t<INS:ME:ALU>\t.\t.\tAC=2033;AF=0.40595;AFR_AF=0.1914;AMR_AF=0.5072;AN=5008;CS=ALU_umary;EAS_AF=0.5069;EUR_AF=0.4771;MEINFO=AluYa5,1,281,+;NS=2504;SAS_AF=0.4468;SITEPOST=1;SVLEN=280;SVTYPE=ALU;TSD=AAAAAGGCTC\tGT\t1|1\n12\t131093927\tDEL_pindel_37750\tCCTGACACTGATGTTGGCAGGGCCTTGATTAACCCTCCTTGGTGATATGGTCAGAGGGACCCCGACCCCCAGAGGAGAACTGAGCCACCTGGGGGACCTTCTCTGGTGAGGTCGGGGGTCAGGAAATGTTGGGCCTGGGTCACTTTCTTCTGTTGGATGGAAGCGGGGTGGTTAGTCAGGGTTCCCTGGAGAAACAGGACAGGATAGATACACATGAAGATACTTATTTGGGGAGTTTCCTCGTGTGATTACAGAGGCCAATAAGTCCCATGATCTGCCGTCTGGAGAGCCAGGAATA\tC\t.\tPASS\tAC=169;AF=0.033746;AFR_AF=0.056;AMR_AF=0.0259;AN=5008;CS=DEL_pindel;EAS_AF=0;END=131094224;EUR_AF=0.0586;NS=2504;SAS_AF=0.0184;SITEPOST=0.9994;SVTYPE=DEL\tGT\t1|0\n12\t133469012\tALU_umary_ALU_9589\tT\t<INS:ME:ALU>\t.\t.\tAC=493;AF=0.0984425;AFR_AF=0.0091;AMR_AF=0.1556;AN=5008;CS=ALU_umary;EAS_AF=0.0863;EUR_AF=0.1471;MEINFO=AluUndef,80,279,-;NS=2504;SAS_AF=0.1411;SITEPOST=1;SVLEN=199;SVTYPE=ALU;TSD=GACAACATTCTTTT\tGT\t1|0\n13\t19201274\tBI_GS_DEL1_B5_P2113_25\tG\t<CN0>\t100\tPASS\tAC=335;AF=0.066893;AFR_AF=0.0144;AMR_AF=0.1254;AN=5008;CIEND=-9,9;CIPOS=-9,9;CS=DEL_union;EAS_AF=0;END=19204213;EUR_AF=0.1909;MC=YL_CN_CLM_2540,YL_CN_FIN_2708,UW_VH_33;NS=2504;SAS_AF=0.0378;SVTYPE=DEL\tGT\t0|1\n13\t21124682\tDEL_pindel_37877\tAGTTACTACTGTTACTACTTGAGACAGTTACTACTGTTACTACTTGAGACAGTTACTACTGTTACTACTTGAGAC\tA\t.\tPASS\tAC=353;AF=0.0704872;AFR_AF=0.1082;AMR_AF=0.0937;AN=5008;CS=DEL_pindel;EAS_AF=0.001;END=21124756;EUR_AF=0.0855;NS=2504;SAS_AF=0.0593;SITEPOST=0.9992;SVTYPE=DEL\tGT\t1|0\n13\t21894780\tALU_umary_ALU_9602\tT\t<INS:ME:ALU>\t.\t.\tAC=1531;AF=0.305711;AFR_AF=0.2897;AMR_AF=0.2565;AN=5008;CS=ALU_umary;EAS_AF=0.2173;EUR_AF=0.3966;MEINFO=AluYb7_2,13,281,-;NS=2504;SAS_AF=0.3599;SITEPOST=1;SVLEN=268;SVTYPE=ALU;TSD=ACCGACCAAGACTTCT\tGT\t1|1\n13\t22052127\tYL_CN_FIN_2719\tT\t<CN0>\t100\tPASS\tAC=10;AF=0.00199681;AFR_AF=0;AMR_AF=0.0029;AN=5008;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0;END=22055126;EUR_AF=0.008;MC=EM_DL_DEL24052,BI_GS_DEL1_B1_P2116_36,UW_VH_34;NS=2504;SAS_AF=0;SVTYPE=DEL\tGT\t1|0\n13\t22530362\tALU_umary_ALU_9609\tG\t<INS:ME:ALU>\t.\t.\tAC=1195;AF=0.238618;AFR_AF=0.1051;AMR_AF=0.268;AN=5008;CS=ALU_umary;EAS_AF=0.246;EUR_AF=0.3489;MEINFO=AluUndef,1,278,+;NS=2504;SAS_AF=0.2771;SITEPOST=1;SVLEN=277;SVTYPE=ALU;TSD=AAAAAACCATCAG\tGT\t1|0\n13\t22574676\tDEL_pindel_37915\tTCAATAAAACCTTGCACTCATTCTCCAAGCCCAGGTGTGATCCGATTCATCCTGTACACCAAGGCAGGGATAAAGAAAGCCCTCTGTCCCTGCCA\tT\t.\tPASS\tAC=548;AF=0.109425;AFR_AF=0.0643;AMR_AF=0.0447;AN=5008;CS=DEL_pindel;EAS_AF=0.0685;END=22574770;EUR_AF=0.0855;NS=2504;SAS_AF=0.2832;SITEPOST=0.9999;SVTYPE=DEL\tGT\t0|1\n13\t23055208\tDEL_pindel_37924\tTTTTTTTTTTTTTTTTTTTTTTTTTGAGATGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGTCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCCTC\tT\t.\tPASS\tAC=1824;AF=0.364217;AFR_AF=0.1415;AMR_AF=0.5663;AN=5008;CS=DEL_pindel;EAS_AF=0.3631;END=23055515;EUR_AF=0.5129;MEINFO=AluYa5,1,281,-;NS=2504;SAS_AF=0.3701;SITEPOST=0.9889;SVTYPE=DEL_ALU\tGT\t0|1\n13\t23632424\tUW_VH_2689\tG\t<CN0>\t100\tPASS\tAC=643;AF=0.128395;AFR_AF=0.0257;AMR_AF=0.1916;AN=5008;CIEND=0,311;CIPOS=-361,0;CS=DEL_union;EAS_AF=0.001;END=23637293;EUR_AF=0.2873;MC=EM_DL_DEL24179,SI_BD_12746,YL_CN_ASW_2984,BI_GS_DEL1_B1_P2117_470;NS=2504;SAS_AF=0.1902;SVTYPE=DEL\tGT\t1|0\n13\t24057640\tDEL_pindel_37941\tTCAGCTTGCAGGGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCCGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCTGCCACCGCGCCCGGCTAATTTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGC\tT\t.\tPASS\tAC=2817;AF=0.5625;AFR_AF=0.6293;AMR_AF=0.4928;AN=5008;CS=DEL_pindel;EAS_AF=0.5883;END=24057972;EUR_AF=0.5567;MEINFO=AluYb3a1,2,281,-;NS=2504;SAS_AF=0.501;SITEPOST=0.99085;SVTYPE=DEL_ALU\tGT\t0|1\n13\t24631697\tUW_VH_2840\tT\t<CN0>\t100\tPASS\tAC=77;AF=0.0153754;AFR_AF=0.0023;AMR_AF=0.0159;AN=5008;CIEND=0,361;CIPOS=-325,0;CS=DEL_union;EAS_AF=0.002;END=24633601;EUR_AF=0.0328;MC=SI_BD_12756,BI_GS_DEL1_B1_P2118_571,EM_DL_DEL24213;NS=2504;SAS_AF=0.0286;SVTYPE=DEL\tGT\t0|1\n13\t25270559\tDEL_pindel_37980\tGGGGGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAAAAAAAATACAAAAAATTAGCCGGGCGCGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCCGGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAAAGGGGAGA\tG\t.\tPASS\tAC=1749;AF=0.349241;AFR_AF=0.2874;AMR_AF=0.3847;AN=5008;CS=DEL_pindel;EAS_AF=0.4643;END=25270895;EUR_AF=0.2386;MEINFO=AluYb6_2,1,281,+;NS=2504;SAS_AF=0.4029;SITEPOST=0.999;SVTYPE=DEL_ALU\tGT\t0|1\n13\t25721017\tDEL_pindel_37990\tAAAAAATTAAAGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCAGAGGCGGGTGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCAGGCGTGGTGGCGGGCACCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAG\tA\t.\tPASS\tAC=3399;AF=0.678714;AFR_AF=0.7413;AMR_AF=0.6614;AN=5008;CS=DEL_pindel;EAS_AF=0.6478;END=25721336;EUR_AF=0.7177;MEINFO=AluY,1,281,+;NS=2504;SAS_AF=0.5982;SITEPOST=0.9848;SVTYPE=DEL_ALU\tGT\t1|0\n13\t27050020\tBI_GS_DEL1_B2_P2121_39\tA\t<CN0>\t100\tPASS\tAC=1309;AF=0.261382;AFR_AF=0.0204;AMR_AF=0.3746;AN=5008;CIEND=0,1;CIPOS=0,1;CS=DEL_union;EAS_AF=0.2917;END=27052181;EUR_AF=0.4066;MC=YL_CN_CEU_3625,YL_CN_CLM_2555,EM_DL_DEL24274,UW_VH_986,SI_BD_12770;NS=2504;SAS_AF=0.3262;SVTYPE=DEL\tGT\t1|0\n13\t29891562\tDEL_pindel_38048\tTCTCTCTCTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCCGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCCATCTCCTGACCTCGTGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGC\tT\t.\tPASS\tAC=3387;AF=0.676318;AFR_AF=0.5408;AMR_AF=0.7334;AN=5008;CS=DEL_pindel;EAS_AF=0.7629;END=29891873;EUR_AF=0.66;MEINFO=AluYb3a1,2,281,-;NS=2504;SAS_AF=0.7464;SITEPOST=0.9732;SVTYPE=DEL_ALU\tGT\t1|0\n13\t36818914\tDEL_pindel_38182\tCAGTGGTCTTGGGGACTCTGACAGTATAGAATTCTTCTAGTGAACCACTGAATATGGATGGG\tC\t.\tPASS\tAC=1873;AF=0.374002;AFR_AF=0.4637;AMR_AF=0.366;AN=5008;CS=DEL_pindel;EAS_AF=0.376;END=36818975;EUR_AF=0.2992;NS=2504;SAS_AF=0.3333;SITEPOST=0.9953;SVTYPE=DEL\tGT\t1|0\n13\t37414451\tBI_GS_DEL1_B4_P2131_83\tC\t<CN0>\t100\tPASS\tAC=2857;AF=0.570487;AFR_AF=0.3502;AMR_AF=0.745;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.5536;END=37414779;EUR_AF=0.7416;MC=DEL_pindel_38193;NS=2504;SAS_AF=0.5859;SVTYPE=DEL\tGT\t1|0\n13\t37949998\tALU_umary_ALU_9699\tT\t<INS:ME:ALU>\t.\t.\tAC=786;AF=0.156949;AFR_AF=0.1452;AMR_AF=0.1383;AN=5008;CS=ALU_umary;EAS_AF=0.1756;EUR_AF=0.2237;MEINFO=AluUndef,79,281,-;NS=2504;SAS_AF=0.0982;SITEPOST=1;SVLEN=202;SVTYPE=ALU;TSD=CCTTTATTTATTTTTTT\tGT\t1|1\n13\t38071941\tBI_GS_DEL1_B5_P2132_89\tG\t<CN0>\t100\tPASS\tAC=1363;AF=0.272165;AFR_AF=0.1339;AMR_AF=0.3127;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.2361;END=38085578;EUR_AF=0.3429;MC=YL_CN_MSL_2723,UW_VH_2160,UW_VH_11953,UW_VH_25161,UW_VH_5812,UW_VH_11026,UW_VH_16169,UW_VH_14313;NS=2504;SAS_AF=0.3947;SVTYPE=DEL\tGT\t0|1\n13\t39057317\tBI_GS_DEL1_B5_P2133_62\tG\t<CN0>\t100\tPASS\tAC=1900;AF=0.379393;AFR_AF=0.2126;AMR_AF=0.4784;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.3155;END=39060204;EUR_AF=0.659;MC=UW_VH_23259,EM_DL_DEL24542,YL_CN_GIH_2304,UW_VH_21192,YL_CN_MXL_2481,UW_VH_1574,YL_CN_PJL_3031,SI_BD_12823,YL_CN_BEB_2480;NS=2504;SAS_AF=0.3129;SVTYPE=DEL\tGT\t0|1\n13\t39499637\tALU_umary_ALU_9708\tA\t<INS:ME:ALU>\t.\t.\tAC=955;AF=0.190695;AFR_AF=0.1014;AMR_AF=0.1657;AN=5008;CS=ALU_umary;EAS_AF=0.2996;EUR_AF=0.2744;MEINFO=AluYa5,1,281,-;NS=2504;SAS_AF=0.1309;SITEPOST=1;SVLEN=280;SVTYPE=ALU;TSD=GAAAGTAGAGAGTTGA\tGT\t1|0\n13\t39934236\tSI_BD_12828\tC\t<CN0>\t100\tPASS\tAC=2712;AF=0.541534;AFR_AF=0.3389;AMR_AF=0.621;AN=5008;CIEND=-123,330;CIPOS=-330,50;CS=DEL_union;EAS_AF=0.6548;END=39935552;EUR_AF=0.6193;MC=YL_CN_TSI_2894,YL_CN_GWD_4052,YL_CN_ITU_2901,YL_CN_GBR_2877,YL_CN_YRI_3728,YL_CN_CEU_3641,YL_CN_PUR_3573,YL_CN_STU_2925,YL_CN_PEL_2671,YL_CN_CHS_3049,YL_CN_CHB_2958,YL_CN_PJL_3033,YL_CN_KHV_3035,YL_CN_BEB_2482,EM_DL_DEL10271859,BI_GS_DEL1_B2_P2133_672;NS=2504;SAS_AF=0.5624;SVTYPE=DEL\tGT\t0|1\n13\t42726801\tALU_umary_ALU_9726\tT\t<INS:ME:ALU>\t.\t.\tAC=360;AF=0.071885;AFR_AF=0.0068;AMR_AF=0.1571;AN=5008;CS=ALU_umary;EAS_AF=0.0139;EUR_AF=0.1213;MEINFO=AluYb7_2,1,270,-;NS=2504;SAS_AF=0.1084;SITEPOST=1;SVLEN=269;SVTYPE=ALU;TSD=GACCTCTTTATTCTT\tGT\t1|0\n13\t42771403\tL1_umary_LINE1_2401\tA\t<INS:ME:LINE1>\t.\t.\tAC=717;AF=0.143171;AFR_AF=0.059;AMR_AF=0.2046;AN=5008;CS=L1_umary;EAS_AF=0.0784;EUR_AF=0.2207;MEINFO=LINE1,5653,6018,+;NS=2504;SAS_AF=0.2004;SITEPOST=1;SVLEN=365;SVTYPE=LINE1;TSD=AAAAAAAAAAAAAA\tGT\t1|1\n13\t42946047\tDEL_pindel_38282\tGGCAATGGGTTTATTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGTGCGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCTACCACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC\tG\t.\tPASS\tAC=3149;AF=0.628794;AFR_AF=0.6248;AMR_AF=0.6398;AN=5008;CS=DEL_pindel;EAS_AF=0.6161;END=42946378;EUR_AF=0.6213;MEINFO=AluYc1,1,281,-;NS=2504;SAS_AF=0.6472;SITEPOST=0.9773;SVTYPE=DEL_ALU\tGT\t1|0\n13\t43053246\tBI_GS_DEL1_B3_P2137_5\tG\t<CN0>\t100\tPASS\tAC=841;AF=0.167931;AFR_AF=0.0696;AMR_AF=0.1182;AN=5008;CIEND=-1,1;CIPOS=-1,1;CS=DEL_union;EAS_AF=0.1696;END=43053893;EUR_AF=0.2207;MC=BI_GS_DEL1_B5_P2137_51,UW_VH_2255,SI_BD_12843;NS=2504;SAS_AF=0.2802;SVTYPE=DEL\tGT\t1|0\n13\t46719751\tDEL_pindel_38350\tTAAAAGAGGGCAGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAATGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA\tT\t.\tPASS\tAC=1049;AF=0.209465;AFR_AF=0.3933;AMR_AF=0.3141;AN=5008;CS=DEL_pindel;EAS_AF=0.0764;END=46720077;EUR_AF=0.1889;MEINFO=AluYa5,1,281,+;NS=2504;SAS_AF=0.045;SITEPOST=0.99855;SVTYPE=DEL_ALU\tGT\t0|1\n13\t48015694\tDEL_pindel_38377\tTATGTACATATATCATATGTACAATTCATGTACATATATCATATGTACAATTCATGTACATATATCATATGTACAATTCATGTACATATATCATATGTACAATTC\tT\t.\tPASS\tAC=1858;AF=0.371006;AFR_AF=0.3026;AMR_AF=0.3934;AN=5008;CS=DEL_pindel;EAS_AF=0.371;END=48015798;EUR_AF=0.3976;NS=2504;SAS_AF=0.4202;SITEPOST=0.99735;SVTYPE=DEL\tGT\t1|0\n13\t48419925\tDEL_pindel_38386\tGGCCACAGGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGCGGCGGAGCTTGCAGTGAGCCGATATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAA\tG\t.\tPASS\tAC=2074;AF=0.414137;AFR_AF=0.503;AMR_AF=0.4496;AN=5008;CS=DEL_pindel;EAS_AF=0.4077;END=48420081;EUR_AF=0.3479;MEINFO=AluYa,148,281,+;NS=2504;SAS_AF=0.3436;SITEPOST=0.9996;SVTYPE=DEL_ALU\tGT\t0|1\n13\t49533344\tUW_VH_2841\tA\t<CN0>\t100\tPASS\tAC=1880;AF=0.375399;AFR_AF=0.2693;AMR_AF=0.3674;AN=5008;CIEND=0,311;CIPOS=-432,0;CS=DEL_union;EAS_AF=0.4097;END=49536617;EUR_AF=0.3638;MC=EM_DL_DEL24773,YL_CN_CLM_2574,SI_BD_12888,BI_GS_DEL1_B1_P2143_517;NS=2504;SAS_AF=0.501;SVTYPE=DEL\tGT\t0|1\n13\t49951399\tBI_GS_DEL1_B4_P2143_192\tA\t<CN0>\t100\tPASS\tAC=2485;AF=0.496206;AFR_AF=0.7436;AMR_AF=0.4784;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.1478;END=49953862;EUR_AF=0.5139;NS=2504;SAS_AF=0.5153;SVTYPE=DEL\tGT\t0|1\n13\t51069347\tBI_GS_DEL1_B1_P2145_60\tG\t<CN0>\t100\tPASS\tAC=3890;AF=0.776757;AFR_AF=0.6793;AMR_AF=0.7939;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.8492;END=51075082;EUR_AF=0.7565;MC=EM_DL_DEL24962,SI_BD_12896,YL_CN_GBR_2889,UW_VH_3036;NS=2504;SAS_AF=0.8425;SVTYPE=DEL\tGT\t1|1\n13\t51551934\tDEL_pindel_38435\tTCCCAGTTAATGCTTTTCTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGTCGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC\tT\t.\tPASS\tAC=1737;AF=0.346845;AFR_AF=0.5053;AMR_AF=0.3689;AN=5008;CS=DEL_pindel;EAS_AF=0.3938;END=51552263;EUR_AF=0.2525;MEINFO=AluYb6_2,1,281,-;NS=2504;SAS_AF=0.1656;SITEPOST=0.9995;SVTYPE=DEL_ALU\tGT\t0|1\n13\t52852412\tDUP_gs_CNV_13_52852412_52864557\tG\t<CN0>,<CN2>\t.\tPASS\tAC=17,1201;AF=0.00339457,0.239816;AFR_AF=0.0098,0.0643;AMR_AF=0,0.3199;AN=5008;CS=DUP_gs;EAS_AF=0.002,0.1746;END=52864557;EUR_AF=0.001,0.4433;NS=2504;SAS_AF=0.001,0.2781;SITEPOST=1;SVTYPE=CNV\tGT\t0|2\n13\t54606529\tALU_umary_ALU_9795\tT\t<INS:ME:ALU>\t.\t.\tAC=665;AF=0.132788;AFR_AF=0.1074;AMR_AF=0.2003;AN=5008;CS=ALU_umary;EAS_AF=0.0933;EUR_AF=0.1183;MEINFO=AluUndef,1,281,-;NS=2504;SAS_AF=0.1748;SITEPOST=1;SVLEN=280;SVTYPE=ALU;TSD=TATCAGTCCCTTCTT\tGT\t0|1\n13\t55941166\tBI_GS_DEL1_B5_P2149_924\tC\t<CN0>\t100\tPASS\tAC=2888;AF=0.576677;AFR_AF=0.2958;AMR_AF=0.6873;AN=5008;CIEND=0,1;CIPOS=0,1;CS=DEL_union;EAS_AF=0.6944;END=55941469;EUR_AF=0.7545;MC=SI_BD_12913,UW_VH_999,DEL_pindel_38511;NS=2504;SAS_AF=0.5736;SVTYPE=DEL\tGT\t1|1\n13\t56151096\tDEL_pindel_38514\tTGTGCTCTAGCTTATGCACAGAGGTCAAGATCCCTTCCCCAACTCTCCACACTGCTGCAGCCACTGCTGCCTCTGAAAGCCAAAGCAAGCAAACCTTAAATCTGAGAGTCTGGGTATGTAAACA\tT\t.\tPASS\tAC=3363;AF=0.671526;AFR_AF=0.4486;AMR_AF=0.7853;AN=5008;CS=DEL_pindel;EAS_AF=0.872;END=56151219;EUR_AF=0.7744;NS=2504;SAS_AF=0.5798;SITEPOST=0.9999;SVTYPE=DEL\tGT\t1|1\n13\t56186576\tALU_umary_ALU_9803\tT\t<INS:ME:ALU>\t.\t.\tAC=2478;AF=0.494808;AFR_AF=0.2761;AMR_AF=0.5403;AN=5008;CS=ALU_umary;EAS_AF=0.6726;EUR_AF=0.6064;MEINFO=AluUndef,1,281,-;NS=2504;SAS_AF=0.4601;SITEPOST=1;SVLEN=280;SVTYPE=ALU;TSD=TAAAAGTTTTTTTTTTT\tGT\t1|1\n13\t57787093\tBI_GS_DEL1_B1_P2151_487\tA\t<CN0>\t100\tPASS\tAC=2147;AF=0.428714;AFR_AF=0.7262;AMR_AF=0.2363;AN=5008;CIEND=0,1;CIPOS=0,1;CS=DEL_union;EAS_AF=0.5169;END=57788378;EUR_AF=0.2674;MC=YL_CN_CLM_2592,YL_CN_CDX_2521,YL_CN_KHV_3062,YL_CN_STU_2958,SI_BD_12925,UW_VH_2412,YL_CN_PUR_3601,YL_CN_BEB_2511,YL_CN_TSI_2927,YL_CN_CHB_2984,YL_CN_ITU_2931;NS=2504;SAS_AF=0.2382;SVTYPE=DEL\tGT\t1|0\n13\t57975500\tDEL_pindel_38550\tAGATATACTCTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC\tA\t.\tPASS\tAC=2706;AF=0.540335;AFR_AF=0.6505;AMR_AF=0.3919;AN=5008;CS=DEL_pindel;EAS_AF=0.4603;END=57975848;EUR_AF=0.5447;MEINFO=AluYa4_4,1,281,-;NS=2504;SAS_AF=0.5746;SITEPOST=0.9916;SVTYPE=DEL_ALU\tGT\t1|0\n13\t59396895\tALU_umary_ALU_9821\tT\t<INS:ME:ALU>\t.\t.\tAC=3067;AF=0.61242;AFR_AF=0.6362;AMR_AF=0.5865;AN=5008;CS=ALU_umary;EAS_AF=0.5823;EUR_AF=0.6322;MEINFO=AluYg6a2,2,281,-;NS=2504;SAS_AF=0.6094;SITEPOST=1;SVLEN=279;SVTYPE=ALU;TSD=GAGTGTTACAGTTCTT\tGT\t1|1\n13\t60172490\tDEL_pindel_38601\tTAAGATCATCGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGCGGTGGCGGGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCCGGCCTGGGCAACAGAGCGAGACTCCGTCTCAAAAAAAATAAAAAATAAAAAAAACAAAACAAAAAA\tT\t.\tPASS\tAC=3823;AF=0.763379;AFR_AF=0.6831;AMR_AF=0.7983;AN=5008;CS=DEL_pindel;EAS_AF=0.7321;END=60172823;EUR_AF=0.8489;MEINFO=AluYb6_2,1,281,+;NS=2504;SAS_AF=0.7914;SITEPOST=0.9935;SVTYPE=DEL_ALU\tGT\t1|1\n13\t61462344\tL1_umary_LINE1_2422\tT\t<INS:ME:LINE1>\t.\t.\tAC=2500;AF=0.499201;AFR_AF=0.3071;AMR_AF=0.5288;AN=5008;CS=L1_umary;EAS_AF=0.7599;EUR_AF=0.5219;MEINFO=LINE1,1,6019,-;NS=2504;SAS_AF=0.4458;SITEPOST=1;SVLEN=6018;SVTYPE=LINE1;TSD=TCTTCTCTTTTTT\tGT\t1|1\n13\t61734497\tL1_umary_LINE1_2424\tA\t<INS:ME:LINE1>\t.\t.\tAC=1566;AF=0.3127;AFR_AF=0.3601;AMR_AF=0.2795;AN=5008;CS=L1_umary;EAS_AF=0.3194;EUR_AF=0.3519;MEINFO=LINE1,5174,6018,+;NS=2504;SAS_AF=0.2249;SITEPOST=1;SVLEN=844;SVTYPE=LINE1;TSD=AAGAGTTTGGGGA\tGT\t1|1\n13\t61787418\tALU_umary_ALU_9841\tT\t<INS:ME:ALU>\t.\t.\tAC=1244;AF=0.248403;AFR_AF=0.4032;AMR_AF=0.2277;AN=5008;CS=ALU_umary;EAS_AF=0.1984;EUR_AF=0.2058;MEINFO=AluYa4_2,1,281,+;NS=2504;SAS_AF=0.1493;SITEPOST=1;SVLEN=280;SVTYPE=ALU;TSD=AAAATTTAATTATTTTT\tGT\t1|0\n13\t64162211\tNUMT_umich_44\tT\t<INS:MT>\t168\tPASS\tAC=136;AF=0.0271566;AFR_AF=0.0787;AMR_AF=0.0086;AN=5008;CIEND=-3,0;CIPOS=0,3;CS=NUMT_umich;EAS_AF=0.001;END=64162213;EUR_AF=0.006;MEND=9407;MLEN=74;MSTART=9334;NS=2504;SAS_AF=0.0194;SVTYPE=INS\tGT\t1|0\n13\t65342437\tBI_GS_DEL1_B3_P2159_11\tT\t<CN0>\t100\tPASS\tAC=667;AF=0.133187;AFR_AF=0.0658;AMR_AF=0.1354;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.005;END=65344433;EUR_AF=0.2505;MC=YL_CN_BEB_2526,YL_CN_CLM_2600,UW_VH_2330,YL_CN_CEU_3673,YL_CN_TSI_2943,SI_BD_12969;NS=2504;SAS_AF=0.2342;SVTYPE=DEL\tGT\t0|1\n13\t65637801\tUW_VH_1004\tT\t<CN0>\t100\tPASS\tAC=3027;AF=0.604433;AFR_AF=0.2421;AMR_AF=0.6167;AN=5008;CIEND=0,485;CIPOS=-537,0;CS=DEL_union;EAS_AF=0.876;END=65638216;EUR_AF=0.669;MC=BI_GS_DEL1_B5_P2159_593,DEL_pindel_38676;NS=2504;SAS_AF=0.7393;SVTYPE=DEL\tGT\t1|1\n13\t67903471\tALU_umary_ALU_9886\tT\t<INS:ME:ALU>\t.\t.\tAC=2494;AF=0.498003;AFR_AF=0.497;AMR_AF=0.4625;AN=5008;CS=ALU_umary;EAS_AF=0.5397;EUR_AF=0.494;MEINFO=AluUndef,78,279,-;NS=2504;SAS_AF=0.4857;SITEPOST=1;SVLEN=201;SVTYPE=ALU;TSD=TATCTATCTGTATTCTT\tGT\t1|0\n13\t67950542\tDEL_pindel_38717\tTGCTATCACTGAAATGTACTACTTTGACTTTGTAAAATTAGCCAGTCCTGACA\tT\t.\tPASS\tAC=2411;AF=0.48143;AFR_AF=0.4758;AMR_AF=0.4885;AN=5008;CS=DEL_pindel;EAS_AF=0.4812;END=67950594;EUR_AF=0.4722;NS=2504;SAS_AF=0.4939;SITEPOST=0.9998;SVTYPE=DEL\tGT\t1|0\n13\t68977877\tBI_GS_DEL1_B2_P2162_623\tA\t<CN0>\t100\tPASS\tAC=1471;AF=0.29373;AFR_AF=0.351;AMR_AF=0.2738;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.1875;END=68978201;EUR_AF=0.3598;MC=UW_VH_25019,DEL_pindel_38744;NS=2504;SAS_AF=0.272;SVTYPE=DEL\tGT\t0|1\n13\t69966662\tDEL_pindel_38762\tAAACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTTGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAG\tA\t.\tPASS\tAC=4550;AF=0.908546;AFR_AF=0.8623;AMR_AF=0.9308;AN=5008;CS=DEL_pindel;EAS_AF=0.9097;END=69966961;EUR_AF=0.9414;MEINFO=AluY,23,281,-;NS=2504;SAS_AF=0.9202;SITEPOST=1;SVTYPE=DEL_ALU\tGT\t1|1\n13\t70079642\tDEL_pindel_38766\tGTGTGTGTATGTATGTGTATATATATATATATATATATATATATATATATATATA\tG\t.\tPASS\tAC=1948;AF=0.388978;AFR_AF=0.3631;AMR_AF=0.3473;AN=5008;CS=DEL_pindel;EAS_AF=0.3909;END=70079696;EUR_AF=0.4473;NS=2504;SAS_AF=0.3916;SITEPOST=0.9705;SVTYPE=DEL\tGT\t1|0\n13\t72386637\tDEL_pindel_38818\tGCATCAAAATGGCACCATCAGAAACACATCAAAATGGCACCATCAGAAACA\tG\t.\tPASS\tAC=1055;AF=0.210663;AFR_AF=0.149;AMR_AF=0.2406;AN=5008;CS=DEL_pindel;EAS_AF=0.1091;END=72386687;EUR_AF=0.3419;NS=2504;SAS_AF=0.2423;SITEPOST=0.9975;SVTYPE=DEL\tGT\t0|1\n13\t72477264\tBI_GS_DEL1_B1_P2166_364\tC\t<CN0>\t100\tPASS\tAC=1619;AF=0.323283;AFR_AF=0.2156;AMR_AF=0.4395;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.0714;END=72480580;EUR_AF=0.5467;MC=UW_VH_10149,UW_VH_17395,YL_CN_MSL_2774,SI_BD_13026,UW_VH_15273,EM_DL_DEL25549,UW_VH_6584,UW_VH_1010;NS=2504;SAS_AF=0.4162;SVTYPE=DEL\tGT\t1|1\n13\t72478323\tUW_VH_21052\tT\t<CN0>\t100\tPASS\tAC=252;AF=0.0503195;AFR_AF=0.0061;AMR_AF=0.0793;AN=5008;CIEND=0,233;CIPOS=-177,0;CS=DEL_union;EAS_AF=0.001;END=72482473;EUR_AF=0.1143;MC=YL_CN_CHB_3002;NS=2504;SAS_AF=0.0746;SVTYPE=DEL\tGT\t0|1\n13\t72843031\tUW_VH_1012\tC\t<CN0>\t100\tPASS\tAC=2437;AF=0.486621;AFR_AF=0.1952;AMR_AF=0.7133;AN=5008;CIEND=0,448;CIPOS=-432,0;CS=DEL_union;EAS_AF=0.4206;END=72846923;EUR_AF=0.6889;MC=BI_GS_DEL1_B2_P2166_561,YL_CN_CHS_3100,UW_VH_10926,UW_VH_11133,SI_BD_13031;NS=2504;SAS_AF=0.5798;SVTYPE=DEL\tGT\t1|0\n13\t72893591\tUW_VH_3329\tA\t<CN0>\t100\tPASS\tAC=28;AF=0.00559105;AFR_AF=0.0008;AMR_AF=0.0072;AN=5008;CIEND=0,333;CIPOS=-276,0;CS=DEL_union;EAS_AF=0;END=72898446;EUR_AF=0.0159;MC=BI_GS_DEL1_B3_P2166_37,EM_DL_DEL25561,YL_CN_TSI_2961;NS=2504;SAS_AF=0.0061;SVTYPE=DEL\tGT\t0|1\n13\t74074911\tDEL_pindel_38839\tTCTATCTTGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGTAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCTATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTTTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC\tT\t.\tPASS\tAC=3433;AF=0.685503;AFR_AF=0.7148;AMR_AF=0.7349;AN=5008;CS=DEL_pindel;EAS_AF=0.5109;END=74075239;EUR_AF=0.7256;MEINFO=AluYa5,1,281,-;NS=2504;SAS_AF=0.7495;SITEPOST=0.9971;SVTYPE=DEL_ALU\tGT\t1|1\n13\t75625199\tDEL_pindel_38865\tCATGTACATTAGCACTAGCCATCCATTTCTGGGCCACACAGATGCACACTGCCACTTCAATGTTTCACTGAAAGTAGGG\tC\t.\tPASS\tAC=2128;AF=0.42492;AFR_AF=0.18;AMR_AF=0.5317;AN=5008;CS=DEL_pindel;EAS_AF=0.5476;END=75625277;EUR_AF=0.5785;NS=2504;SAS_AF=0.3957;SITEPOST=1;SVTYPE=DEL\tGT\t1|1\n13\t76639273\tDEL_pindel_38892\tTAGGTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGATGGAGTCTCGCTCTGTTGCCCAGGCTGGAGTGCAGTGGCGCGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCTACCACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTGTTAACCAGAATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC\tT\t.\tPASS\tAC=2153;AF=0.429912;AFR_AF=0.292;AMR_AF=0.5159;AN=5008;CS=DEL_pindel;EAS_AF=0.4921;END=76639600;EUR_AF=0.4543;MEINFO=AluYc1,1,281,-;NS=2504;SAS_AF=0.4663;SITEPOST=0.9997;SVTYPE=DEL_ALU\tGT\t1|0\n13\t78997598\tBI_GS_DEL1_B4_P2172_239\tA\t<CN0>\t100\tPASS\tAC=1393;AF=0.278155;AFR_AF=0.09;AMR_AF=0.4452;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.4573;END=78998715;EUR_AF=0.2425;MC=SI_BD_13061,UW_VH_5105,UW_VH_14513;NS=2504;SAS_AF=0.2658;SVTYPE=DEL\tGT\t1|0\n13\t79259800\tL1_umary_LINE1_2461\tT\t<INS:ME:LINE1>\t.\t.\tAC=3937;AF=0.786142;AFR_AF=0.7209;AMR_AF=0.8184;AN=5008;CS=L1_umary;EAS_AF=0.8433;EUR_AF=0.8211;MEINFO=LINE1,4182,6010,-;NS=2504;SAS_AF=0.7566;SITEPOST=1;SVLEN=1828;SVTYPE=LINE1;TSD=TAAACACAGTTTT\tGT\t1|1\n13\t79271601\tALU_umary_ALU_9947\tC\t<INS:ME:ALU>\t.\t.\tAC=2937;AF=0.586462;AFR_AF=0.5401;AMR_AF=0.5951;AN=5008;CS=ALU_umary;EAS_AF=0.6171;EUR_AF=0.6153;MEINFO=AluUndef,2,281,+;NS=2504;SAS_AF=0.5818;SITEPOST=1;SVLEN=279;SVTYPE=ALU;TSD=AGAAATGGGCATATTC\tGT\t1|0\n13\t79661067\tDEL_pindel_38962\tTATGACATCACATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCCGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC\tT\t.\tPASS\tAC=2418;AF=0.482827;AFR_AF=0.5159;AMR_AF=0.4092;AN=5008;CS=DEL_pindel;EAS_AF=0.5387;END=79661402;EUR_AF=0.4414;MEINFO=AluYa5,1,281,-;NS=2504;SAS_AF=0.4755;SITEPOST=0.9976;SVTYPE=DEL_ALU\tGT\t0|1\n13\t80678313\tDEL_pindel_38979\tTCTAATTTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGCGACCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCCGGGACCACAGGCGCCCGCCACCACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGGCGGGGTTTCACCGCGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCGCCCGCCTCTGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGC\tT\t.\tPASS\tAC=1413;AF=0.282149;AFR_AF=0.2912;AMR_AF=0.3833;AN=5008;CS=DEL_pindel;EAS_AF=0.3452;END=80678630;EUR_AF=0.2724;MEINFO=AluYh7,2,281,-;NS=2504;SAS_AF=0.1431;SITEPOST=0.9992;SVTYPE=DEL_ALU\tGT\t0|1\n13\t81373740\tALU_umary_ALU_9959\tA\t<INS:ME:ALU>\t.\t.\tAC=358;AF=0.0714856;AFR_AF=0.0242;AMR_AF=0.0749;AN=5008;CS=ALU_umary;EAS_AF=0.0655;EUR_AF=0.165;MEINFO=AluUndef,1,228,+;NS=2504;SAS_AF=0.0429;SITEPOST=1;SVLEN=227;SVTYPE=ALU;TSD=AAAAATATAGAATGAACTGAGAAA\tGT\t1|0\n13\t81747236\tDEL_pindel_39001\tTTCAGCTCACCAACTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACAGAGTCTCGCTCTGTTGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC\tT\t.\tPASS\tAC=3115;AF=0.622005;AFR_AF=0.5378;AMR_AF=0.6383;AN=5008;CS=DEL_pindel;EAS_AF=0.6597;END=81747564;EUR_AF=0.6501;MEINFO=AluYa5,1,281,-;NS=2504;SAS_AF=0.6564;SITEPOST=0.97915;SVTYPE=DEL_ALU\tGT\t0|1\n13\t82355641\tDEL_pindel_39018\tGTATTGGCTTGGTTATGGGTACTCTCTTGAGCTCTGCCAACTGAACAGATAGAACA\tG\t.\tPASS\tAC=2413;AF=0.481829;AFR_AF=0.4773;AMR_AF=0.4827;AN=5008;CS=DEL_pindel;EAS_AF=0.4881;END=82355696;EUR_AF=0.4702;NS=2504;SAS_AF=0.4928;SITEPOST=0.9911;SVTYPE=DEL\tGT\t0|1\n13\t83179448\tDEL_pindel_39039\tTTATTTTTAATTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGACCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGATGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCTGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC\tT\t.\tPASS\tAC=2456;AF=0.490415;AFR_AF=0.5098;AMR_AF=0.4049;AN=5008;CS=DEL_pindel;EAS_AF=0.4891;END=83179755;EUR_AF=0.507;MEINFO=AluYa5c1,1,281,-;NS=2504;SAS_AF=0.5092;SITEPOST=0.9901;SVTYPE=DEL_ALU\tGT\t1|1\n13\t85270032\tDEL_pindel_39101\tGTATATATATATATATATATATATATATATATATATATATATATATATATATA\tG\t.\tPASS\tAC=1458;AF=0.291134;AFR_AF=0.3843;AMR_AF=0.2536;AN=5008;CS=DEL_pindel;EAS_AF=0.1478;END=85270084;EUR_AF=0.3539;NS=2504;SAS_AF=0.2751;SITEPOST=0.9959;SVTYPE=DEL\tGT\t0|1\n13\t85871612\tL1_umary_LINE1_2467\tT\t<INS:ME:LINE1>\t.\t.\tAC=2298;AF=0.458866;AFR_AF=0.407;AMR_AF=0.4741;AN=5008;CS=L1_umary;EAS_AF=0.3442;EUR_AF=0.5825;MEINFO=LINE1,5297,5937,-;NS=2504;SAS_AF=0.5092;SITEPOST=1;SVLEN=640;SVTYPE=LINE1;TSD=ATATTTTCTTT\tGT\t1|1\n13\t86166446\tALU_umary_ALU_9989\tT\t<INS:ME:ALU>\t.\t.\tAC=1227;AF=0.245008;AFR_AF=0.0832;AMR_AF=0.2277;AN=5008;CS=ALU_umary;EAS_AF=0.3333;EUR_AF=0.2893;MEINFO=AluUndef,132,281,-;NS=2504;SAS_AF=0.3395;SITEPOST=1;SVLEN=149;SVTYPE=ALU;TSD=TT\tGT\t1|0\n13\t86340152\tL1_umary_LINE1_2470\tG\t<INS:ME:LINE1>\t.\t.\tAC=1685;AF=0.336462;AFR_AF=0.1384;AMR_AF=0.3473;AN=5008;CS=L1_umary;EAS_AF=0.622;EUR_AF=0.3022;MEINFO=LINE1,5386,6018,-;NS=2504;SAS_AF=0.3374;SITEPOST=1;SVLEN=632;SVTYPE=LINE1;TSD=null\tGT\t1|0\n13\t87392969\tALU_umary_ALU_9995\tT\t<INS:ME:ALU>\t.\t.\tAC=2367;AF=0.472644;AFR_AF=0.3623;AMR_AF=0.4712;AN=5008;CS=ALU_umary;EAS_AF=0.5119;EUR_AF=0.5229;MEINFO=AluYa5,27,281,-;NS=2504;SAS_AF=0.5307;SITEPOST=1;SVLEN=254;SVTYPE=ALU;TSD=CTTTTAACTGAACATTTCTAATTTT\tGT\t1|1\n13\t87696257\tALU_umary_ALU_9998\tA\t<INS:ME:ALU>\t.\t.\tAC=1550;AF=0.309505;AFR_AF=0.2383;AMR_AF=0.3256;AN=5008;CS=ALU_umary;EAS_AF=0.2629;EUR_AF=0.4344;MEINFO=AluUndef,45,268,+;NS=2504;SAS_AF=0.3139;SITEPOST=1;SVLEN=223;SVTYPE=ALU;TSD=AAAGAACTCTCCACCCCA\tGT\t1|1\n13\t89003264\tDEL_pindel_39167\tTCTAAATCTAGTATTTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGC\tT\t.\tPASS\tAC=3519;AF=0.702676;AFR_AF=0.6853;AMR_AF=0.719;AN=5008;CS=DEL_pindel;EAS_AF=0.7282;END=89003600;EUR_AF=0.7068;MEINFO=AluYa5,2,281,-;NS=2504;SAS_AF=0.684;SITEPOST=0.9313;SVTYPE=DEL_ALU\tGT\t1|0\n13\t90401846\tALU_umary_ALU_10012\tA\t<INS:ME:ALU>\t.\t.\tAC=1470;AF=0.29353;AFR_AF=0.3396;AMR_AF=0.2709;AN=5008;CS=ALU_umary;EAS_AF=0.2183;EUR_AF=0.3668;MEINFO=AluUndef,1,271,+;NS=2504;SAS_AF=0.2495;SITEPOST=1;SVLEN=270;SVTYPE=ALU;TSD=AGAAATGAGTTTTATA\tGT\t1|1\n13\t90550575\tALU_umary_ALU_10014\tG\t<INS:ME:ALU>\t.\t.\tAC=1918;AF=0.382987;AFR_AF=0.3374;AMR_AF=0.2911;AN=5008;CS=ALU_umary;EAS_AF=0.4831;EUR_AF=0.4205;MEINFO=AluUndef,1,276,-;NS=2504;SAS_AF=0.3681;SITEPOST=1;SVLEN=275;SVTYPE=ALU;TSD=AACAGGAGACAGATG\tGT\t1|0\n13\t90726943\tDEL_pindel_39197\tGCTTGTATTGTAGGATGAATTCTTATTAAATTTTATCCTGGGAACACACTGCTCAT\tG\t.\tPASS\tAC=521;AF=0.104034;AFR_AF=0.2693;AMR_AF=0.0591;AN=5008;CS=DEL_pindel;EAS_AF=0.0109;END=90726998;EUR_AF=0.0825;NS=2504;SAS_AF=0.0307;SITEPOST=0.9998;SVTYPE=DEL\tGT\t0|1\n13\t90862850\tUW_VH_1959\tC\t<CN0>\t100\tPASS\tAC=2425;AF=0.484225;AFR_AF=0.3238;AMR_AF=0.4092;AN=5008;CIEND=0,503;CIPOS=-443,0;CS=DEL_union;EAS_AF=0.631;END=90864805;EUR_AF=0.4632;MC=UW_VH_11988,UW_VH_20803,YL_CN_JPT_3191,EM_DL_DEL10291895,YL_CN_KHV_3086,YL_CN_ASW_3051,UW_VH_20437,YL_CN_BEB_2547,SI_BD_13132,YL_CN_TSI_2983,BI_GS_DEL1_B1_P2184_642,YL_CN_CDX_2545,YL_CN_GBR_2945;NS=2504;SAS_AF=0.6247;SVTYPE=DEL\tGT\t1|1\n13\t90947642\tALU_umary_ALU_10018\tG\t<INS:ME:ALU>\t.\t.\tAC=2771;AF=0.553315;AFR_AF=0.5567;AMR_AF=0.4841;AN=5008;CS=ALU_umary;EAS_AF=0.626;EUR_AF=0.4751;MEINFO=AluUndef,3,279,-;NS=2504;SAS_AF=0.6033;SITEPOST=1;SVLEN=276;SVTYPE=ALU;TSD=null\tGT\t1|0\n13\t91160038\tDEL_pindel_39208\tTAAAAGGGTTACTTTAAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGCGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCCGGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAA\tT\t.\tPASS\tAC=3842;AF=0.767173;AFR_AF=0.7322;AMR_AF=0.7983;AN=5008;CS=DEL_pindel;EAS_AF=0.8026;END=91160287;EUR_AF=0.7594;MEINFO=AluY,69,281,+;NS=2504;SAS_AF=0.7638;SITEPOST=0.95725;SVTYPE=DEL_ALU\tGT\t1|1\n13\t92111709\tDEL_pindel_39221\tCTGGACATAGTAAGAAAAGAATTGAAGCCCAGGGCATCCTGATAATGGTAAAATATATCAGGGTTGCATCAGTGATGTAGGTGCCTGGAGGGTAGTGGATTAAAGAAGCCCAGGCTGTAGGA\tC\t.\tPASS\tAC=715;AF=0.142772;AFR_AF=0.1203;AMR_AF=0.0504;AN=5008;CS=DEL_pindel;EAS_AF=0.249;END=92111830;EUR_AF=0.0586;NS=2504;SAS_AF=0.2157;SITEPOST=0.995;SVTYPE=DEL\tGT\t0|1\n13\t92161674\tALU_umary_ALU_10024\tT\t<INS:ME:ALU>\t.\t.\tAC=1974;AF=0.394169;AFR_AF=0.1021;AMR_AF=0.451;AN=5008;CS=ALU_umary;EAS_AF=0.5476;EUR_AF=0.5527;MEINFO=AluUndef,1,275,-;NS=2504;SAS_AF=0.4274;SITEPOST=1;SVLEN=274;SVTYPE=ALU;TSD=AACATATTCATATTTT\tGT\t0|1\n13\t92261286\tALU_umary_ALU_10025\tA\t<INS:ME:ALU>\t.\t.\tAC=2527;AF=0.504593;AFR_AF=0.3215;AMR_AF=0.5605;AN=5008;CS=ALU_umary;EAS_AF=0.6448;EUR_AF=0.5855;MEINFO=AluUndef,2,281,+;NS=2504;SAS_AF=0.4847;SITEPOST=1;SVLEN=279;SVTYPE=ALU;TSD=AATTTAGATTTGA\tGT\t1|1\n13\t92279248\tDEL_pindel_39224\tTGAACTCATCATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCGGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTGCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC\tT\t.\tPASS\tAC=3552;AF=0.709265;AFR_AF=0.7201;AMR_AF=0.7089;AN=5008;CS=DEL_pindel;EAS_AF=0.7679;END=92279583;EUR_AF=0.671;MEINFO=AluYb6_2,1,281,-;NS=2504;SAS_AF=0.6738;SITEPOST=0.9255;SVTYPE=DEL_ALU\tGT\t1|0\n13\t92513980\tALU_umary_ALU_10026\tA\t<INS:ME:ALU>\t.\t.\tAC=1504;AF=0.300319;AFR_AF=0.0825;AMR_AF=0.2233;AN=5008;CS=ALU_umary;EAS_AF=0.4504;EUR_AF=0.3121;MEINFO=AluYa5,22,281,-;NS=2504;SAS_AF=0.4826;SITEPOST=1;SVLEN=259;SVTYPE=ALU;TSD=AAATAAAACATGTTGCTA\tGT\t1|0\n13\t93828421\tALU_umary_ALU_10036\tT\t<INS:ME:ALU>\t.\t.\tAC=3204;AF=0.639776;AFR_AF=0.5915;AMR_AF=0.6455;AN=5008;CS=ALU_umary;EAS_AF=0.627;EUR_AF=0.6909;MEINFO=AluYa5,7,280,-;NS=2504;SAS_AF=0.6616;SITEPOST=1;SVLEN=273;SVTYPE=ALU;TSD=CATGCAGAAAAGGTTTTT\tGT\t0|1\n13\t94120730\tALU_umary_ALU_10040\tA\t<INS:ME:ALU>\t.\t.\tAC=462;AF=0.0922524;AFR_AF=0.0938;AMR_AF=0.0663;AN=5008;CS=ALU_umary;EAS_AF=0.0427;EUR_AF=0.1501;MEINFO=AluUndef,5,281,+;NS=2504;SAS_AF=0.1002;SITEPOST=1;SVLEN=276;SVTYPE=ALU;TSD=AATAAAGAAGCA\tGT\t1|0\n13\t97347834\tDEL_pindel_39295\tATACCACCACCCTCAGCTGTTTTTTTTTTTTTTTTCTTTTACAGATGGAGTCTCACTATGATCCCCAGGCTGGTCTTGAACTCCTGGCC\tA\t.\tPASS\tAC=616;AF=0.123003;AFR_AF=0.152;AMR_AF=0.2061;AN=5008;CS=DEL_pindel;EAS_AF=0.1121;END=97347922;EUR_AF=0.0835;NS=2504;SAS_AF=0.0767;SITEPOST=0.9998;SVTYPE=DEL\tGT\t0|1\n13\t98721236\tDEL_pindel_39320\tCCCTTCTGCTTGATTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCCGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCTTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGG\tC\t.\tPASS\tAC=2782;AF=0.555511;AFR_AF=0.4319;AMR_AF=0.5836;AN=5008;CS=DEL_pindel;EAS_AF=0.4355;END=98721556;EUR_AF=0.7137;MEINFO=AluYb6_2,3,281,-;NS=2504;SAS_AF=0.6636;SITEPOST=0.9869;SVTYPE=DEL_ALU\tGT\t1|0\n13\t98734914\tALU_umary_ALU_10058\tT\t<INS:ME:ALU>\t.\t.\tAC=296;AF=0.0591054;AFR_AF=0.0393;AMR_AF=0.0576;AN=5008;CS=ALU_umary;EAS_AF=0.002;EUR_AF=0.1332;MEINFO=AluUndef,3,281,-;NS=2504;SAS_AF=0.0695;SITEPOST=1;SVLEN=278;SVTYPE=ALU;TSD=GACAGTTTGCCATTAACCTT\tGT\t0|1\n13\t99254021\tYL_CN_GIH_2351\tC\t<CN0>\t100\tPASS\tAC=1244;AF=0.248403;AFR_AF=0.0998;AMR_AF=0.2075;AN=5008;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0.4038;END=99258251;EUR_AF=0.3012;MC=BI_GS_DEL1_B1_P2193_246,UW_VH_2415,EM_DL_DEL26305;NS=2504;SAS_AF=0.2638;SVTYPE=DEL\tGT\t0|1\n13\t100082627\tALU_umary_ALU_10064\tT\t<INS:ME:ALU>\t.\t.\tAC=3053;AF=0.609625;AFR_AF=0.5885;AMR_AF=0.6182;AN=5008;CS=ALU_umary;EAS_AF=0.631;EUR_AF=0.6173;MEINFO=AluUndef,9,281,-;NS=2504;SAS_AF=0.6022;SITEPOST=1;SVLEN=272;SVTYPE=ALU;TSD=TATCCATCCATCTGTT\tGT\t1|1\n13\t101535973\tALU_umary_ALU_10068\tT\t<INS:ME:ALU>\t.\t.\tAC=873;AF=0.174321;AFR_AF=0.1475;AMR_AF=0.2349;AN=5008;CS=ALU_umary;EAS_AF=0.1329;EUR_AF=0.2922;MEINFO=AluUndef,1,280,-;NS=2504;SAS_AF=0.089;SITEPOST=1;SVLEN=279;SVTYPE=ALU;TSD=GAGTTTATTCTT\tGT\t0|1\n13\t101625773\tDEL_pindel_39375\tATATATATTATATATATAATATATAATACATATGTATTATATATACATATGTATATATATAATATATACATATATATAATATATATAATACATATGTAT\tA\t.\tPASS\tAC=2803;AF=0.559704;AFR_AF=0.5303;AMR_AF=0.5922;AN=5008;CS=DEL_pindel;EAS_AF=0.5863;END=101625871;EUR_AF=0.5457;NS=2504;SAS_AF=0.5634;SITEPOST=0.9765;SVTYPE=DEL\tGT\t0|1\n13\t101894135\tUW_VH_13766\tT\t<CN0>\t100\tPASS\tAC=2412;AF=0.481629;AFR_AF=0.4826;AMR_AF=0.4524;AN=5008;CIEND=0,546;CIPOS=-449,0;CS=DEL_union;EAS_AF=0.4077;END=101896428;EUR_AF=0.5288;MC=UW_VH_20831,UW_VH_6353,BI_GS_DEL1_B2_P2195_681,EM_DL_DEL26336,UW_VH_24667,UW_VH_5106,UW_VH_17320,YL_CN_CLM_2630,SI_BD_13196,UW_VH_2545,YL_CN_JPT_3199;NS=2504;SAS_AF=0.5286;SVTYPE=DEL\tGT\t0|1\n13\t103931643\tDEL_pindel_39420\tTAGAAAACCTGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAATGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCGGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAA\tT\t.\tPASS\tAC=2522;AF=0.503594;AFR_AF=0.6853;AMR_AF=0.513;AN=5008;CS=DEL_pindel;EAS_AF=0.4405;END=103931958;EUR_AF=0.4175;MEINFO=AluYa5,1,281,+;NS=2504;SAS_AF=0.4049;SITEPOST=0.9998;SVTYPE=DEL_ALU\tGT\t0|1\n13\t104009854\tDEL_pindel_39424\tTCAGTTTCTTTTATTTATTTATTTATTTATTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGACAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC\tT\t.\tPASS\tAC=1824;AF=0.364217;AFR_AF=0.6505;AMR_AF=0.3055;AN=5008;CS=DEL_pindel;EAS_AF=0.2411;END=104010173;EUR_AF=0.2744;MEINFO=AluYa5,1,281,-;NS=2504;SAS_AF=0.2382;SITEPOST=0.9999;SVTYPE=DEL_ALU\tGT\t0|1\n13\t104091776\tSI_BD_13206\tG\t<CN0>\t100\tPASS\tAC=4414;AF=0.88139;AFR_AF=0.8616;AMR_AF=0.9207;AN=5008;CIEND=-50,250;CIPOS=-250,50;CS=DEL_union;EAS_AF=0.8363;END=104092258;EUR_AF=0.8787;MC=DEL_pindel_39429,BI_GS_DEL1_B1_P2198_103,UW_VH_1027;NS=2504;SAS_AF=0.9294;SVTYPE=DEL\tGT\t1|1\n13\t104144377\tDEL_pindel_39431\tTCCATTCCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTCAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGG\tT\t.\tPASS\tAC=3365;AF=0.671925;AFR_AF=0.5847;AMR_AF=0.6888;AN=5008;CS=DEL_pindel;EAS_AF=0.6905;END=104144660;EUR_AF=0.7247;MEINFO=AluY,47,281,-;NS=2504;SAS_AF=0.7045;SITEPOST=0.9316;SVTYPE=DEL_ALU\tGT\t0|1\n13\t105161209\tDEL_pindel_39446\tTAAAAGATCTTGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAA\tT\t.\tPASS\tAC=3058;AF=0.610623;AFR_AF=0.5378;AMR_AF=0.6225;AN=5008;CS=DEL_pindel;EAS_AF=0.6458;END=105161523;EUR_AF=0.6272;MEINFO=AluYa5,1,281,+;NS=2504;SAS_AF=0.6472;SITEPOST=0.9831;SVTYPE=DEL_ALU\tGT\t0|1\n13\t106449327\tBI_GS_DEL1_B3_P2200_14\tT\t<CN0>\t100\tPASS\tAC=1647;AF=0.328874;AFR_AF=0.441;AMR_AF=0.3516;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.1012;END=106449921;EUR_AF=0.332;MC=UW_VH_1874;NS=2504;SAS_AF=0.3926;SVTYPE=DEL\tGT\t1|0\n13\t107924538\tDEL_pindel_39494\tTTAGAATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCCGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC\tT\t.\tPASS\tAC=3038;AF=0.606629;AFR_AF=0.4705;AMR_AF=0.6354;AN=5008;CS=DEL_pindel;EAS_AF=0.6339;END=107924861;EUR_AF=0.666;MEINFO=AluYb3a1,1,281,-;NS=2504;SAS_AF=0.681;SITEPOST=0.9926;SVTYPE=DEL_ALU\tGT\t1|0\n13\t108603779\tDEL_pindel_39502\tCTTACAAACCTTTAGCTAGACACAAGCGCTGATTGGTGCATTTTTACAGAGTGCTGATTGGCACAT\tC\t.\tPASS\tAC=990;AF=0.197684;AFR_AF=0.177;AMR_AF=0.2118;AN=5008;CS=DEL_pindel;EAS_AF=0.0774;END=108603844;EUR_AF=0.2972;NS=2504;SAS_AF=0.2372;SITEPOST=0.9961;SVTYPE=DEL\tGT\t1|0\n13\t108719818\tALU_umary_ALU_10097\tT\t<INS:ME:ALU>\t.\t.\tAC=1105;AF=0.220647;AFR_AF=0.1732;AMR_AF=0.2248;AN=5008;CS=ALU_umary;EAS_AF=0.251;EUR_AF=0.2674;MEINFO=AluYb6_2,1,256,-;NS=2504;SAS_AF=0.2025;SITEPOST=1;SVLEN=255;SVTYPE=ALU;TSD=AATAATTTTT\tGT\t1|0\n13\t108947031\tUW_VH_1876\tG\t<CN0>\t100\tPASS\tAC=561;AF=0.112021;AFR_AF=0.2027;AMR_AF=0.0706;AN=5008;CIEND=0,364;CIPOS=-323,0;CS=DEL_union;EAS_AF=0.0208;END=108951803;EUR_AF=0.1571;MC=BI_GS_DEL1_B1_P2202_814,YL_CN_GIH_2357,EM_DL_DEL26420,SI_BD_13225;NS=2504;SAS_AF=0.0665;SVTYPE=DEL\tGT\t1|0\n13\t109361752\tBI_GS_DEL1_B3_P2203_15\tT\t<CN0>\t100\tPASS\tAC=1587;AF=0.316893;AFR_AF=0.3011;AMR_AF=0.304;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.2718;END=109362442;EUR_AF=0.2922;MC=DEL_pindel_39514,SI_BD_13226;NS=2504;SAS_AF=0.4192;SVTYPE=DEL\tGT\t0|1\n13\t110812491\tDEL_pindel_39549\tTAAAAAAATTCATAGGGGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGCGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCCGGGAAGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCCGGCCTGGGTGACAGAGCGAGACTCCGTCTCAAAAAAAAAA\tT\t.\tPASS\tAC=696;AF=0.138978;AFR_AF=0.177;AMR_AF=0.1354;AN=5008;CS=DEL_pindel;EAS_AF=0.2381;END=110812806;EUR_AF=0.0736;MEINFO=AluYb6_2,1,281,+;NS=2504;SAS_AF=0.0552;SITEPOST=0.9997;SVTYPE=DEL_ALU\tGT\t1|0\n13\t111076811\tALU_umary_ALU_10110\tT\t<INS:ME:ALU>\t.\t.\tAC=2283;AF=0.455871;AFR_AF=0.3759;AMR_AF=0.4899;AN=5008;CS=ALU_umary;EAS_AF=0.5476;EUR_AF=0.4652;MEINFO=AluYa5,1,281,-;NS=2504;SAS_AF=0.4356;SITEPOST=1;SVLEN=280;SVTYPE=ALU;TSD=AATAAGTTAATTCTTT\tGT\t0|1\n13\t111559414\tDEL_pindel_39560\tACAGCAACACTTCTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCAGGATGGTCTCGAT\tA\t.\tPASS\tAC=4041;AF=0.806909;AFR_AF=0.7769;AMR_AF=0.83;AN=5008;CS=DEL_pindel;EAS_AF=0.8224;END=111559652;EUR_AF=0.8101;MEINFO=AluY,76,281,-;NS=2504;SAS_AF=0.8119;SITEPOST=0.9669;SVTYPE=DEL_ALU\tGT\t1|1\n13\t111703587\tDEL_pindel_39564\tACCCACTCACACACATGCATGCATGCACACATAGACATATGCACTCACTCACACACATGCATGCATGTGCAAATGTATGCC\tA\t.\tPASS\tAC=1909;AF=0.38119;AFR_AF=0.3026;AMR_AF=0.4063;AN=5008;CS=DEL_pindel;EAS_AF=0.4345;END=111703667;EUR_AF=0.4056;NS=2504;SAS_AF=0.3896;SITEPOST=1;SVTYPE=DEL\tGT\t1|0\n13\t112993799\tALU_umary_ALU_10119\tG\t<INS:ME:ALU>\t.\t.\tAC=1156;AF=0.230831;AFR_AF=0.0537;AMR_AF=0.2723;AN=5008;CS=ALU_umary;EAS_AF=0.3065;EUR_AF=0.3002;MEINFO=AluYa4_5,1,281,-;NS=2504;SAS_AF=0.2914;SITEPOST=1;SVLEN=280;SVTYPE=ALU;TSD=AAAGAAAAAATTATTGAACAG\tGT\t0|1\n13\t113520967\tALU_umary_ALU_10121\tT\t<INS:ME:ALU>\t.\t.\tAC=2060;AF=0.411342;AFR_AF=0.357;AMR_AF=0.4409;AN=5008;CS=ALU_umary;EAS_AF=0.4534;EUR_AF=0.4364;MEINFO=AluUndef,1,280,-;NS=2504;SAS_AF=0.3947;SITEPOST=1;SVLEN=279;SVTYPE=ALU;TSD=TCTGGGTGACTTCT\tGT\t1|1\n13\t113616375\tDEL_pindel_39609\tACATGCACACACAAACACGCTCACACCCAGGCATGCACACACACGCACGGACACGCACATG\tA\t.\tPASS\tAC=2074;AF=0.414137;AFR_AF=0.3797;AMR_AF=0.3818;AN=5008;CS=DEL_pindel;EAS_AF=0.3859;END=113616435;EUR_AF=0.4592;NS=2504;SAS_AF=0.4663;SITEPOST=0.9828;SVTYPE=DEL\tGT\t1|0\n13\t113991046\tDEL_pindel_39632\tGGTACCAACCATCCCTCCAGACAGCGGACGCACACAGGCCAAGTGCCCGCCTGGCGCTCAGCCCTAGAACT\tG\t.\tPASS\tAC=2881;AF=0.57528;AFR_AF=0.5424;AMR_AF=0.6225;AN=5008;CS=DEL_pindel;EAS_AF=0.5813;END=113991116;EUR_AF=0.5845;NS=2504;SAS_AF=0.5706;SITEPOST=0.9827;SVTYPE=DEL\tGT\t1|0\n14\t19112155\tDUP_gs_CNV_14_19112155_19126473\tT\t<CN2>,<CN3>\t.\tPASS\tAC=4986,4;AF=0.995607,0.00079872;AFR_AF=0.9924,0;AMR_AF=0.9957,0.0014;AN=5008;CS=DUP_gs;EAS_AF=0.999,0;END=19126473;EUR_AF=0.996,0.001;NS=2504;SAS_AF=0.9959,0.002;SITEPOST=1;SVTYPE=CNV\tGT\t1|1\n14\t19275560\tYL_CN_CHS_3148\tG\t<CN0>\t100\tPASS\tAC=1051;AF=0.209864;AFR_AF=0.2557;AMR_AF=0.1686;AN=5008;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0.2778;END=19303201;EUR_AF=0.174;MC=SI_BD_13318;NS=2504;SAS_AF=0.1442;SVTYPE=DEL\tGT\t1|0\n14\t19286876\tEM_DL_DEL26774\tT\t<CN0>\t100\tPASS\tAC=1056;AF=0.210863;AFR_AF=0.2572;AMR_AF=0.1729;AN=5008;CIEND=-150,150;CIPOS=-150,150;CS=DEL_union;EAS_AF=0.2778;END=19293367;EUR_AF=0.174;NS=2504;SAS_AF=0.1442;SVTYPE=DEL\tGT\t1|0\n14\t19290037\tSI_BD_13319\tT\t<CN0>\t100\tPASS\tAC=1053;AF=0.210264;AFR_AF=0.2564;AMR_AF=0.1686;AN=5008;CIEND=-50,226;CIPOS=-226,50;CS=DEL_union;EAS_AF=0.2768;END=19297660;EUR_AF=0.1759;NS=2504;SAS_AF=0.1442;SVTYPE=DEL\tGT\t1|0\n14\t20335553\tDUP_gs_CNV_14_20335553_20423316\tC\t<CN2>,<CN3>,<CN4>\t.\tPASS\tAC=1599,131,69;AF=0.319289,0.0261582,0.013778;AFR_AF=0.2874,0.0129,0.0045;AMR_AF=0.3069,0.0245,0.0086;AN=5008;CS=DUP_gs;EAS_AF=0.3423,0.0238,0.0109;END=20423316;EUR_AF=0.3002,0.0338,0.0129;NS=2504;SAS_AF=0.3671,0.0399,0.0337;SITEPOST=1;SVTYPE=CNV\tGT\t1|0\n14\t21176134\tSVA_umary_SVA_587\tT\t<INS:ME:SVA>\t.\t.\tAC=1372;AF=0.273962;AFR_AF=0.1974;AMR_AF=0.3516;AN=5008;CS=SVA_umary;EAS_AF=0.1845;EUR_AF=0.4185;MEINFO=SVA,1087,1399,-;NS=2504;SAS_AF=0.2658;SITEPOST=1;SVLEN=312;SVTYPE=SVA;TSD=GCTAAAGGGATTTT\tGT\t0|1\n14\t21536131\tDEL_pindel_39688\tTGGCTCCCCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGCGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCTACCACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC\tT\t.\tPASS\tAC=2578;AF=0.514776;AFR_AF=0.3979;AMR_AF=0.6066;AN=5008;CS=DEL_pindel;EAS_AF=0.5833;END=21536457;EUR_AF=0.5775;MEINFO=AluYc1,1,281,-;NS=2504;SAS_AF=0.4724;SITEPOST=0.96505;SVTYPE=DEL_ALU\tGT\t1|0\n14\t21778185\tBI_GS_DEL1_B5_P2231_956\tA\t<CN0>\t100\tPASS\tAC=2864;AF=0.571885;AFR_AF=0.5998;AMR_AF=0.5447;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.5724;END=21778397;EUR_AF=0.505;MC=DEL_pindel_39700;NS=2504;SAS_AF=0.6217;SVTYPE=DEL\tGT\t0|1\n14\t21952624\tUW_VH_11113\tC\t<CN0>\t100\tPASS\tAC=2568;AF=0.51278;AFR_AF=0.4917;AMR_AF=0.379;AN=5008;CIEND=0,508;CIPOS=-417,0;CS=DEL_union;EAS_AF=0.6488;END=21954666;EUR_AF=0.502;MC=YL_CN_CDX_2617,UW_VH_9439,BI_GS_DEL1_B1_P2231_854,EM_DL_DEL26880,SI_BD_13336,UW_VH_1583;NS=2504;SAS_AF=0.5072;SVTYPE=DEL\tGT\t1|0\n14\t23922251\tBI_GS_DEL1_B1_P2233_760\tT\t<CN0>\t100\tPASS\tAC=3055;AF=0.610024;AFR_AF=0.3752;AMR_AF=0.6484;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.6379;END=23922650;EUR_AF=0.7833;MC=UW_VH_1033,SI_BD_13350,DEL_pindel_39751;NS=2504;SAS_AF=0.6933;SVTYPE=DEL\tGT\t0|1\n14\t25262334\tBI_GS_DEL1_B5_P2235_359\tG\t<CN0>\t100\tPASS\tAC=550;AF=0.109824;AFR_AF=0.0953;AMR_AF=0.0922;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.1498;END=25263126;EUR_AF=0.1044;MC=DEL_pindel_39799,SI_BD_13357,UW_VH_2954,UW_VH_16616;NS=2504;SAS_AF=0.1063;SVTYPE=DEL\tGT\t0|1\n14\t26147100\tDEL_pindel_39811\tTGAATTTAAGGTTTATTTATTTATTTTTTTTATTTTTTATTTTTTTTTTTAATTTATTTTATTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCAGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCTCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCCC\tT\t.\tPASS\tAC=583;AF=0.116414;AFR_AF=0.1853;AMR_AF=0.1138;AN=5008;CS=DEL_pindel;EAS_AF=0.001;END=26147457;EUR_AF=0.166;MEINFO=AluYa4b,1,281,-;NS=2504;SAS_AF=0.093;SITEPOST=0.99985;SVTYPE=DEL_ALU\tGT\t0|1\n14\t26283834\tBI_GS_DEL1_B5_P2236_344\tT\t<CN0>\t100\tPASS\tAC=415;AF=0.0828674;AFR_AF=0.0976;AMR_AF=0.0836;AN=5008;CIEND=-12,13;CIPOS=-12,13;CS=DEL_union;EAS_AF=0.001;END=26284791;EUR_AF=0.1491;MC=DEL_pindel_39814,UW_VH_1036,EM_DL_DEL10307208;NS=2504;SAS_AF=0.0787;SVTYPE=DEL\tGT\t0|1\n14\t29728038\tDEL_pindel_39894\tTGAGAATTCTTTTTTTTTTTTTTTGTTTTGCAACTAATATTGATTTCTTTTTTATTTTTATTTTTATTTTTATTTTTTTTTTAATTTTTTTTTTTTATTATACTCTAAGTTTTAGGGTACATGTGCACATTGTGCAGGTTAGTTACATATGTATACATGTGCCATGCTGGTGCGCTGCACCCACTAACGTGTCATCTAGCATTAGGTATATCTCCCAATGCTATCCCTCCCCCCTCCCCCGACCCCACCACAGTCCCCAGAGTGTGATATTCCCCTTCCTGTGTCCATGTGATCTCATTGTTCAATTCCCACCTATGAGACATCATCTCACACCAGTTAGAATGGCAATCATTAAAAAGTCAGGAAACAACAGGTGCTGGAGAGGATGTGGAGAAATAGGAACACTTTTACACTGTTGGTGGGACTGTAAACTAGTTCAACCATTGTGGAAGTCAGTGTGGCGATTCCTCAGGGATCTAGAACTAGAAATACCATTTGACCCAGCCATCCCATTACTGGGTATATACCCAAAGGACTATAAATCATGCTGCTATAAAGACACATGCACACGTATGTTTATTGCGGCACTATTCACAATAGCAAAGACTTGGAACCAACCCAAATGTCCAACAATGATAGACTGGATTAAGAAAATGTGGCACATATACACCATGGAATACTATGCAGCCATAAAAAATGATGAGTTCATGTCCTTTGTAGGGACATGGATGAAATTGGAAACCATCATTCTCAGTAAACTATCGC\tT\t.\tPASS\tAC=2851;AF=0.569289;AFR_AF=0.5719;AMR_AF=0.487;AN=5008;CS=DEL_pindel;EAS_AF=0.6528;END=29728802;EUR_AF=0.5189;NS=2504;SAS_AF=0.59;SITEPOST=0.999;SVTYPE=DEL\tGT\t0|1\n14\t30854683\tL1_umary_LINE1_2529\tC\t<INS:ME:LINE1>\t.\t.\tAC=209;AF=0.0417332;AFR_AF=0.0265;AMR_AF=0.0317;AN=5008;CS=L1_umary;EAS_AF=0;EUR_AF=0.0825;MEINFO=LINE1,4631,6018,+;NS=2504;SAS_AF=0.0706;SITEPOST=1;SVLEN=1387;SVTYPE=LINE1;TSD=AAGATTACCAAATGAC\tGT\t1|0\n14\t31444309\tALU_umary_ALU_10183\tC\t<INS:ME:ALU>\t.\t.\tAC=1757;AF=0.350839;AFR_AF=0.3275;AMR_AF=0.3804;AN=5008;CS=ALU_umary;EAS_AF=0.3075;EUR_AF=0.4602;MEINFO=AluYa4_5,1,281,+;NS=2504;SAS_AF=0.2935;SITEPOST=1;SVLEN=280;SVTYPE=ALU;TSD=AAGAAAAAGACAC\tGT\t1|0\n14\t32953270\tSI_BD_13403\tA\t<CN0>\t100\tPASS\tAC=3940;AF=0.786741;AFR_AF=0.8971;AMR_AF=0.7219;AN=5008;CIEND=-50,250;CIPOS=-250,94;CS=DEL_union;EAS_AF=0.87;END=32954364;EUR_AF=0.5656;MC=YL_CN_MXL_2595,EM_DL_DEL10309418,YL_CN_STU_3084,YL_CN_IBS_2793,YL_CN_ITU_3045,YL_CN_GIH_2417,YL_CN_PUR_3714,YL_CN_PEL_2816;NS=2504;SAS_AF=0.8252;SVTYPE=DEL\tGT\t0|1\n14\t33435780\tDEL_pindel_39935\tTAAGAACCCAAATTATGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGCGGTGGCGGGCGCCTGTAGTCCCAGCTACTGGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCAGAGATTGCGCCACTGCAGTCCGCAGTCCGGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAA\tT\t.\tPASS\tAC=1024;AF=0.204473;AFR_AF=0.3328;AMR_AF=0.1599;AN=5008;CS=DEL_pindel;EAS_AF=0.0149;END=33436003;EUR_AF=0.2465;MEINFO=AluY,101,281,+;NS=2504;SAS_AF=0.2147;SITEPOST=0.9998;SVTYPE=DEL_ALU\tGT\t0|1\n14\t34514028\tBI_GS_DEL1_B2_P2244_373\tC\t<CN0>\t100\tPASS\tAC=1342;AF=0.267971;AFR_AF=0.1944;AMR_AF=0.4179;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.3522;END=34514838;EUR_AF=0.1879;MC=EM_DL_DEL10310178,UW_VH_1586;NS=2504;SAS_AF=0.2566;SVTYPE=DEL\tGT\t1|1\n14\t35401402\tDEL_pindel_39981\tTAAGAAATTTCAGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACACGGTGAAACCCCACCTCTACTAAAAATACAAAAAATTAGCTGGGCGTGGTGGCGGGCGCCTGTAGTCCCAGCTACTGGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGTGGAGCTTGCAGTGAGCCCAGATCGCGCCACTGCACTCCAGCCTGGGTGACAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA\tT\t.\tPASS\tAC=2081;AF=0.415535;AFR_AF=0.3389;AMR_AF=0.4496;AN=5008;CS=DEL_pindel;EAS_AF=0.4077;END=35401723;EUR_AF=0.5139;MEINFO=AluY,1,281,+;NS=2504;SAS_AF=0.4018;SITEPOST=0.9995;SVTYPE=DEL_ALU\tGT\t0|1\n14\t35428788\tBI_GS_DEL1_B5_P2245_352\tG\t<CN0>\t100\tPASS\tAC=205;AF=0.0409345;AFR_AF=0.0038;AMR_AF=0.0548;AN=5008;CIEND=-7,7;CIPOS=-7,7;CS=DEL_union;EAS_AF=0;END=35432438;EUR_AF=0.0905;MC=YL_CN_IBS_2797,UW_VH_1040,EM_DL_DEL27584,SI_BD_13416;NS=2504;SAS_AF=0.0726;SVTYPE=DEL\tGT\t0|1\n14\t36674760\tL1_umary_LINE1_2536\tA\t<INS:ME:LINE1>\t.\t.\tAC=1809;AF=0.361222;AFR_AF=0.2383;AMR_AF=0.3516;AN=5008;CS=L1_umary;EAS_AF=0.3452;EUR_AF=0.4821;MEINFO=LINE1,5830,6019,+;NS=2504;SAS_AF=0.4264;SITEPOST=1;SVLEN=189;SVTYPE=LINE1;TSD=AAGAATTTCCTGTTTA\tGT\t1|0\n14\t37999777\tDUP_gs_CNV_14_37999777_38013670\tA\t<CN2>\t.\tPASS\tAC=10;AF=0.00199681;AFR_AF=0;AMR_AF=0.0014;AN=5008;CS=DUP_gs;EAS_AF=0;END=38013670;EUR_AF=0.0089;NS=2504;SAS_AF=0;SITEPOST=1;SVTYPE=DUP\tGT\t1|0\n14\t38245235\tDEL_pindel_40021\tCTGGGTCTTGATTCTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGATTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTGTCTTTTTAGTAGAGACGGGGTT\tC\t.\tPASS\tAC=2525;AF=0.504193;AFR_AF=0.4675;AMR_AF=0.5764;AN=5008;CS=DEL_pindel;EAS_AF=0.4762;END=38245451;EUR_AF=0.5298;MEINFO=AluY,104,281,-;NS=2504;SAS_AF=0.5051;SITEPOST=0.997;SVTYPE=DEL_ALU\tGT\t1|0\n14\t40312966\tALU_umary_ALU_10232\tT\t<INS:ME:ALU>\t.\t.\tAC=2543;AF=0.507788;AFR_AF=0.472;AMR_AF=0.5159;AN=5008;CS=ALU_umary;EAS_AF=0.5913;EUR_AF=0.5596;MEINFO=AluYa4_5,1,281,-;NS=2504;SAS_AF=0.411;SITEPOST=1;SVLEN=280;SVTYPE=ALU;TSD=GATTCTTATCAACTCTTTT\tGT\t1|1\n14\t40882900\tALU_umary_ALU_10240\tA\t<INS:ME:ALU>\t.\t.\tAC=1637;AF=0.326877;AFR_AF=0.1089;AMR_AF=0.3329;AN=5008;CS=ALU_umary;EAS_AF=0.5278;EUR_AF=0.325;MEINFO=AluYa4_2,2,281,-;NS=2504;SAS_AF=0.4121;SITEPOST=1;SVLEN=279;SVTYPE=ALU;TSD=TCCTTTGTCCTCTA\tGT\t1|0\n14\t41122391\tDEL_pindel_40057\tGATCCTCCCACCTCAGCCTCTAGCGAAAACTACAGATGCACATGACCATATCTGTCTAATATACTTTATTTTTTAAAAATATATAGTGATGAGGTCT\tG\t.\tPASS\tAC=1466;AF=0.292732;AFR_AF=0.1868;AMR_AF=0.3141;AN=5008;CS=DEL_pindel;EAS_AF=0.3968;END=41122487;EUR_AF=0.1799;NS=2504;SAS_AF=0.4294;SITEPOST=0.9994;SVTYPE=DEL\tGT\t0|1\n14\t41602366\tDEL_pindel_40067\tATATTTTCTCAAATATATACGTATATATTTTCTCAAATATATACGTATATAT\tA\t.\tPASS\tAC=1286;AF=0.256789;AFR_AF=0.0643;AMR_AF=0.1715;AN=5008;CS=DEL_pindel;EAS_AF=0.3998;END=41602417;EUR_AF=0.3181;NS=2504;SAS_AF=0.3671;SITEPOST=0.988;SVTYPE=DEL\tGT\t1|1\n14\t43899449\tDEL_pindel_40110\tATTCTCAAATAACAAAATGATATACAATCTATTCATATGCTAGCCCAATTAACTTTGGCTAATGAGAATAAAGAACCAAAAGTG\tA\t.\tPASS\tAC=3195;AF=0.637979;AFR_AF=0.5726;AMR_AF=0.6671;AN=5008;CS=DEL_pindel;EAS_AF=0.6796;END=43899532;EUR_AF=0.6511;NS=2504;SAS_AF=0.6493;SITEPOST=0.95005;SVTYPE=DEL\tGT\t1|0\n14\t45014099\tALU_umary_ALU_10265\tA\t<INS:ME:ALU>\t.\t.\tAC=2059;AF=0.411142;AFR_AF=0.3782;AMR_AF=0.4006;AN=5008;CS=ALU_umary;EAS_AF=0.4345;EUR_AF=0.4195;MEINFO=AluYa5,1,277,-;NS=2504;SAS_AF=0.4305;SITEPOST=1;SVLEN=276;SVTYPE=ALU;TSD=CTCA\tGT\t0|1\n14\t46577923\tDEL_pindel_40143\tTAAAAGCCTCCAATTGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAA\tT\t.\tPASS\tAC=3384;AF=0.675719;AFR_AF=0.7254;AMR_AF=0.7925;AN=5008;CS=DEL_pindel;EAS_AF=0.503;END=46578243;EUR_AF=0.7416;MEINFO=AluYa5,1,281,+;NS=2504;SAS_AF=0.636;SITEPOST=0.9818;SVTYPE=DEL_ALU\tGT\t1|1\n14\t48334241\tDEL_pindel_40196\tTAAAAAACATTTTGGCCGGGCGCAGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGAGTGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCGCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAA\tT\t.\tPASS\tAC=2923;AF=0.583666;AFR_AF=0.4652;AMR_AF=0.6571;AN=5008;CS=DEL_pindel;EAS_AF=0.504;END=48334556;EUR_AF=0.672;MEINFO=AluY,1,281,+;NS=2504;SAS_AF=0.683;SITEPOST=0.9924;SVTYPE=DEL_ALU\tGT\t0|1\n14\t50118870\tDEL_pindel_40234\tTAAGAATAGAATACGGAGAGGAGAATGGCATGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCGCGCCACTGCACTCCAGCCTGGGCAACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA\tT\t.\tPASS\tAC=2334;AF=0.466054;AFR_AF=0.531;AMR_AF=0.5346;AN=5008;CS=DEL_pindel;EAS_AF=0.2421;END=50119027;EUR_AF=0.5765;MEINFO=AluYc,188,282,+;NS=2504;SAS_AF=0.4468;SITEPOST=0.9981;SVTYPE=DEL_ALU\tGT\t1|0\n14\t51408908\tBI_GS_DEL1_B4_P2261_87\tA\t<CN0>\t100\tPASS\tAC=1394;AF=0.278355;AFR_AF=0.0719;AMR_AF=0.3948;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.4454;END=51409542;EUR_AF=0.2406;MC=SI_BD_13518;NS=2504;SAS_AF=0.3415;SVTYPE=DEL\tGT\t1|0\n14\t51432094\tALU_umary_ALU_10299\tT\t<INS:ME:ALU>\t.\t.\tAC=1958;AF=0.390974;AFR_AF=0.1286;AMR_AF=0.4539;AN=5008;CS=ALU_umary;EAS_AF=0.5258;EUR_AF=0.4821;MEINFO=AluYb11,1,263,-;NS=2504;SAS_AF=0.4683;SITEPOST=1;SVLEN=262;SVTYPE=ALU;TSD=CTGGAATTAAATCTT\tGT\t1|0\n14\t51719000\tALU_umary_ALU_10302\tC\t<INS:ME:ALU>\t.\t.\tAC=1800;AF=0.359425;AFR_AF=0.2912;AMR_AF=0.4006;AN=5008;CS=ALU_umary;EAS_AF=0.3552;EUR_AF=0.4095;MEINFO=AluUndef,1,281,+;NS=2504;SAS_AF=0.3753;SITEPOST=1;SVLEN=280;SVTYPE=ALU;TSD=AAAGAAATCTTTCC\tGT\t1|0\n14\t52594665\tDEL_pindel_40272\tCAAAAAAGGCAAATGCCGGCCGGGCGCGGTGGCTCACGCCTGTAGTCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAAGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAA\tC\t.\tPASS\tAC=419;AF=0.0836661;AFR_AF=0.0741;AMR_AF=0.0807;AN=5008;CS=DEL_pindel;EAS_AF=0.1121;END=52594980;EUR_AF=0.0974;MEINFO=AluYa5,1,281,+;NS=2504;SAS_AF=0.0552;SITEPOST=1;SVTYPE=DEL_ALU\tGT\t0|1\n14\t54564051\tDEL_pindel_40316\tCAAAACAACAGTAATCGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTGGTAGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCGCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAACAAACAAACAAAAAAA\tC\t.\tPASS\tAC=3373;AF=0.673522;AFR_AF=0.5166;AMR_AF=0.6715;AN=5008;CS=DEL_pindel;EAS_AF=0.7609;END=54564385;EUR_AF=0.7326;MEINFO=AluYc2,1,281,+;NS=2504;SAS_AF=0.7362;SITEPOST=0.9815;SVTYPE=DEL_ALU\tGT\t1|1\n14\t54710363\tUW_VH_1048\tC\t<CN0>\t100\tPASS\tAC=680;AF=0.135783;AFR_AF=0.0136;AMR_AF=0.2205;AN=5008;CIEND=0,400;CIPOS=-479,0;CS=DEL_union;EAS_AF=0.0397;END=54713688;EUR_AF=0.2853;MC=YL_CN_CLM_2722,BI_GS_DEL1_B2_P2264_550,EM_DL_DEL28168;NS=2504;SAS_AF=0.1861;SVTYPE=DEL\tGT\t0|1\n14\t54815743\tALU_umary_ALU_10321\tT\t<INS:ME:ALU>\t.\t.\tAC=1323;AF=0.264177;AFR_AF=0.1581;AMR_AF=0.3401;AN=5008;CS=ALU_umary;EAS_AF=0.1905;EUR_AF=0.4294;MEINFO=AluUndef,1,276,-;NS=2504;SAS_AF=0.2597;SITEPOST=1;SVLEN=275;SVTYPE=ALU;TSD=TGTCCCAAATATTCTT\tGT\t1|0\n14\t55795871\tALU_umary_ALU_10325\tT\t<INS:ME:ALU>\t.\t.\tAC=1144;AF=0.228435;AFR_AF=0.171;AMR_AF=0.1758;AN=5008;CS=ALU_umary;EAS_AF=0.2698;EUR_AF=0.2783;MEINFO=AluUndef,1,281,-;NS=2504;SAS_AF=0.2495;SITEPOST=1;SVLEN=280;SVTYPE=ALU;TSD=TAAAACGTGGTTTATTTCT\tGT\t1|0\n14\t59883503\tBI_GS_DEL1_B3_P2269_45\tC\t<CN0>\t100\tPASS\tAC=2157;AF=0.430711;AFR_AF=0.056;AMR_AF=0.389;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.8472;END=59884059;EUR_AF=0.4682;NS=2504;SAS_AF=0.499;SVTYPE=DEL\tGT\t0|1\n14\t60454171\tALU_umary_ALU_10348\tT\t<INS:ME:ALU>\t.\t.\tAC=2272;AF=0.453674;AFR_AF=0.2943;AMR_AF=0.5317;AN=5008;CS=ALU_umary;EAS_AF=0.4841;EUR_AF=0.6133;MEINFO=AluYb7_4,1,280,-;NS=2504;SAS_AF=0.4182;SITEPOST=1;SVLEN=279;SVTYPE=ALU;TSD=CAACCTTAACTTCTTT\tGT\t0|1\n14\t60575499\tALU_umary_ALU_10350\tT\t<INS:ME:ALU>\t.\t.\tAC=2035;AF=0.40635;AFR_AF=0.2602;AMR_AF=0.4841;AN=5008;CS=ALU_umary;EAS_AF=0.4365;EUR_AF=0.5268;MEINFO=AluYa5c1,1,281,-;NS=2504;SAS_AF=0.3937;SITEPOST=1;SVLEN=280;SVTYPE=ALU;TSD=ATATTGATTTTTT\tGT\t1|1\n14\t63226292\tALU_umary_ALU_10360\tT\t<INS:ME:ALU>\t.\t.\tAC=1499;AF=0.299321;AFR_AF=0.1006;AMR_AF=0.3199;AN=5008;CS=ALU_umary;EAS_AF=0.3294;EUR_AF=0.339;MEINFO=AluUndef,10,250,-;NS=2504;SAS_AF=0.4816;SITEPOST=1;SVLEN=240;SVTYPE=ALU;TSD=AGGGTATAT\tGT\t1|0\n14\t63787170\tDEL_pindel_40512\tACGACAATTTGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACAGTGAAACCCCGTCTCTACTAAAACTACAAAAAATAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCTAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAACAAAAAAAAAAAAACAAAAAAAAAAC\tA\t.\tPASS\tAC=1129;AF=0.225439;AFR_AF=0.3835;AMR_AF=0.1254;AN=5008;CS=DEL_pindel;EAS_AF=0.2431;END=63787502;EUR_AF=0.2197;MEINFO=AluYa8,1,281,+;NS=2504;SAS_AF=0.0706;SITEPOST=0.9999;SVTYPE=DEL_ALU\tGT\t1|1\n14\t65015043\tALU_umary_ALU_10368\tT\t<INS:ME:ALU>\t.\t.\tAC=1610;AF=0.321486;AFR_AF=0.1914;AMR_AF=0.3314;AN=5008;CS=ALU_umary;EAS_AF=0.4315;EUR_AF=0.3519;MEINFO=AluYb8,8,280,-;NS=2504;SAS_AF=0.3456;SITEPOST=1;SVLEN=272;SVTYPE=ALU;TSD=GAGTTTCT\tGT\t0|1\n14\t65606353\tUW_VH_22798\tT\t<CN0>\t100\tPASS\tAC=1289;AF=0.257388;AFR_AF=0.2337;AMR_AF=0.1744;AN=5008;CIEND=0,213;CIPOS=-211,0;CS=DEL_union;EAS_AF=0.2024;END=65608023;EUR_AF=0.333;MC=BI_GS_DEL1_B2_P2275_501,UW_VH_2161,EM_DL_DEL10321714,UW_VH_10871,UW_VH_13312,YL_CN_JPT_3301;NS=2504;SAS_AF=0.3272;SVTYPE=DEL\tGT\t0|1\n14\t68603032\tBI_GS_DEL1_B5_P2278_718\tC\t<CN0>\t100\tPASS\tAC=3433;AF=0.685503;AFR_AF=0.3192;AMR_AF=0.7911;AN=5008;CIEND=-2,3;CIPOS=-2,3;CS=DEL_union;EAS_AF=0.879;END=68603740;EUR_AF=0.7952;MC=UW_VH_6471,SI_BD_13603,UW_VH_1054;NS=2504;SAS_AF=0.7935;SVTYPE=DEL\tGT\t1|1\n14\t68995379\tDEL_pindel_40625\tTAATTATTTACCTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCCGGACTGCGGACTGCAG\tT\t.\tPASS\tAC=4093;AF=0.817292;AFR_AF=0.7897;AMR_AF=0.8242;AN=5008;CS=DEL_pindel;EAS_AF=0.8204;END=68995453;EUR_AF=0.84;MEINFO=AluYb8,242,282,-;NS=2504;SAS_AF=0.8231;SITEPOST=0.9707;SVTYPE=DEL_ALU\tGT\t1|1\n14\t70687829\tBI_GS_DEL1_B5_P2280_931\tC\t<CN0>\t100\tPASS\tAC=166;AF=0.033147;AFR_AF=0.0045;AMR_AF=0.0389;AN=5008;CIEND=0,1;CIPOS=0,1;CS=DEL_union;EAS_AF=0;END=70689462;EUR_AF=0.1083;MC=SI_BD_13609,UW_VH_2480,EM_DL_DEL10323909;NS=2504;SAS_AF=0.0245;SVTYPE=DEL\tGT\t1|0\n14\t71320960\tDEL_pindel_40675\tTCACCCTGAATTATTTCTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGTTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGG\tT\t.\tPASS\tAC=3191;AF=0.637181;AFR_AF=0.6346;AMR_AF=0.6859;AN=5008;CS=DEL_pindel;EAS_AF=0.5764;END=71321253;EUR_AF=0.664;MEINFO=AluY,22,281,-;NS=2504;SAS_AF=0.6411;SITEPOST=0.982;SVTYPE=DEL_ALU\tGT\t1|1\n14\t76813775\tBI_GS_DEL1_B4_P2286_204\tT\t<CN0>\t100\tPASS\tAC=2954;AF=0.589856;AFR_AF=0.5295;AMR_AF=0.6888;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.5903;END=76814213;EUR_AF=0.5398;NS=2504;SAS_AF=0.6524;SVTYPE=DEL\tGT\t1|1\n14\t77193681\tDEL_pindel_40805\tTGCCTAGCCTCTGTGCTAGCCTCTAAGTGCTTTTTAATACACTAATTAATAATTATAAC\tT\t.\tPASS\tAC=2039;AF=0.407149;AFR_AF=0.407;AMR_AF=0.3934;AN=5008;CS=DEL_pindel;EAS_AF=0.4018;END=77193739;EUR_AF=0.4026;NS=2504;SAS_AF=0.4274;SITEPOST=0.9987;SVTYPE=DEL\tGT\t0|1\n14\t78249852\tDEL_pindel_40818\tTAAAAATTTAGTGATTATTGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCTGGGCAACAGGGTGAAACCCCGTCTCTACTAAAAATACAAAAAAAAAATTAGCCGGGCGTGGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCGCGCCACTGCACTCCAGCCTGGGGGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA\tT\t.\tPASS\tAC=3738;AF=0.746406;AFR_AF=0.7073;AMR_AF=0.7709;AN=5008;CS=DEL_pindel;EAS_AF=0.6806;END=78250190;EUR_AF=0.7396;MEINFO=AluY,1,281,+;NS=2504;SAS_AF=0.8569;SITEPOST=0.9955;SVTYPE=DEL_ALU\tGT\t1|1\n14\t78982709\tALU_umary_ALU_10421\tG\t<INS:ME:ALU>\t.\t.\tAC=1448;AF=0.289137;AFR_AF=0.1959;AMR_AF=0.3386;AN=5008;CS=ALU_umary;EAS_AF=0.3492;EUR_AF=0.2942;MEINFO=AluUndef,1,280,+;NS=2504;SAS_AF=0.3129;SITEPOST=1;SVLEN=279;SVTYPE=ALU;TSD=AGAATAGAAAAGAAGG\tGT\t0|1\n14\t79653926\tDEL_pindel_40846\tTAAAAATGTGTAAGCATGCAGTGAGCCGAGATTGCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAA\tT\t.\tPASS\tAC=4141;AF=0.826877;AFR_AF=0.7844;AMR_AF=0.8401;AN=5008;CS=DEL_pindel;EAS_AF=0.8631;END=79654025;EUR_AF=0.829;MEINFO=AluY,216,281,+;NS=2504;SAS_AF=0.8354;SITEPOST=0.9805;SVTYPE=DEL_ALU\tGT\t1|1\n14\t80106272\tUW_VH_1059\tA\t<CN0>\t100\tPASS\tAC=831;AF=0.165935;AFR_AF=0.0166;AMR_AF=0.353;AN=5008;CIEND=0,422;CIPOS=-393,0;CS=DEL_union;EAS_AF=0.0476;END=80115058;EUR_AF=0.34;MC=UW_VH_4748,YL_CN_PUR_3758,EM_DL_DEL28860,BI_GS_DEL1_B2_P2290_97,UW_VH_5813;NS=2504;SAS_AF=0.1779;SVTYPE=DEL\tGT\t1|0\n14\t81786791\tSVA_umary_SVA_613\tT\t<INS:ME:SVA>\t.\t.\tAC=1794;AF=0.358227;AFR_AF=0.329;AMR_AF=0.3588;AN=5008;CS=SVA_umary;EAS_AF=0.3383;EUR_AF=0.4384;MEINFO=SVA,82,1618,-;NS=2504;SAS_AF=0.3354;SITEPOST=1;SVLEN=1536;SVTYPE=SVA;TSD=ACCATTTTTATAATTAAT\tGT\t0|1\n14\t82499115\tUW_VH_13935\tC\t<CN0>\t100\tPASS\tAC=2422;AF=0.483626;AFR_AF=0.2753;AMR_AF=0.6095;AN=5008;CIEND=0,441;CIPOS=-387,0;CS=DEL_union;EAS_AF=0.6081;END=82503327;EUR_AF=0.5994;MC=UW_VH_20804,UW_VH_1960,UW_VH_14438,UW_VH_10825,UW_VH_14455,UW_VH_20548,UW_VH_5353,YL_CN_GBR_3075,UW_VH_18025,EM_DL_DEL28947,UW_VH_17985;NS=2504;SAS_AF=0.4284;SVTYPE=DEL\tGT\t0|1\n14\t83019601\tDEL_pindel_40934\tAAGTAATCAACTTCTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCAATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTG\tA\t.\tPASS\tAC=3041;AF=0.607228;AFR_AF=0.5272;AMR_AF=0.5548;AN=5008;CS=DEL_pindel;EAS_AF=0.6746;END=83019882;EUR_AF=0.6312;MEINFO=AluY,35,281,-;NS=2504;SAS_AF=0.6585;SITEPOST=0.9872;SVTYPE=DEL_ALU\tGT\t1|0\n14\t83386736\tDEL_pindel_40948\tACGTCATTACTTTCTAATGTTTAAAATAACTCAAAACAAAATTGAAAATGATTAACCTGAAGAAGAGATGAATGTCTTTAAAGATTATACTGAGGAATTTCTAGTGAATGAAACATGAAATAAGGAGATGAAAAACTTTAAAAAAAACGTTAAGCAGTATGGGC\tA\t.\tPASS\tAC=212;AF=0.0423323;AFR_AF=0.0363;AMR_AF=0.0331;AN=5008;CS=DEL_pindel;EAS_AF=0.0377;END=83386899;EUR_AF=0.0626;NS=2504;SAS_AF=0.0409;SITEPOST=0.9988;SVTYPE=DEL\tGT\t0|1\n14\t83435132\tUW_VH_2418\tC\t<CN0>\t100\tPASS\tAC=407;AF=0.08127;AFR_AF=0.0121;AMR_AF=0.0692;AN=5008;CIEND=0,271;CIPOS=-295,0;CS=DEL_union;EAS_AF=0.1002;END=83437109;EUR_AF=0.1292;MC=BI_GS_DEL1_B5_P2293_494,YL_CN_BEB_2645;NS=2504;SAS_AF=0.1145;SVTYPE=DEL\tGT\t1|0\n14\t83852035\tBI_GS_DEL1_B5_P2293_928\tT\t<CN0>\t100\tPASS\tAC=1940;AF=0.38738;AFR_AF=0.1634;AMR_AF=0.3314;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.6161;END=83852358;EUR_AF=0.3231;MC=UW_VH_2764;NS=2504;SAS_AF=0.5603;SVTYPE=DEL\tGT\t1|0\n14\t85139129\tBI_GS_DEL1_B5_P2295_155\tT\t<CN0>\t100\tPASS\tAC=1599;AF=0.319289;AFR_AF=0.32;AMR_AF=0.353;AN=5008;CIEND=0,1;CIPOS=0,1;CS=DEL_union;EAS_AF=0.3323;END=85139627;EUR_AF=0.2386;NS=2504;SAS_AF=0.364;SVTYPE=DEL\tGT\t0|1\n14\t87858056\tDEL_pindel_41052\tTAAAATCGTGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGAGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAATAAAAAAATAAAAAAAAAAAAAAAA\tT\t.\tPASS\tAC=4764;AF=0.951278;AFR_AF=0.913;AMR_AF=0.9582;AN=5008;CS=DEL_pindel;EAS_AF=0.9653;END=87858383;EUR_AF=0.9622;MEINFO=AluYa5,1,281,+;NS=2504;SAS_AF=0.9724;SITEPOST=1;SVTYPE=DEL_ALU\tGT\t1|1\n14\t92125068\tALU_umary_ALU_10493\tA\t<INS:ME:ALU>\t.\t.\tAC=2919;AF=0.582867;AFR_AF=0.5144;AMR_AF=0.5735;AN=5008;CS=ALU_umary;EAS_AF=0.626;EUR_AF=0.5676;MEINFO=AluUndef,4,280,+;NS=2504;SAS_AF=0.6534;SITEPOST=1;SVLEN=276;SVTYPE=ALU;TSD=AAAAAAAGGAAGGGA\tGT\t1|0\n14\t93336487\tSI_BD_13751\tA\t<CN0>\t100\tPASS\tAC=679;AF=0.135583;AFR_AF=0.031;AMR_AF=0.1844;AN=5008;CIEND=-50,50;CIPOS=-50,50;CS=DEL_union;EAS_AF=0.1954;END=93338122;EUR_AF=0.1223;NS=2504;SAS_AF=0.1943;SVTYPE=DEL\tGT\t0|1\n14\t94235337\tDEL_pindel_41153\tGCCAGTGATTACAGGTGTGCACCAACACAACTGGCTAAAGATCACTTTTTTAAAAGT\tG\t.\tPASS\tAC=2818;AF=0.5627;AFR_AF=0.5363;AMR_AF=0.6758;AN=5008;CS=DEL_pindel;EAS_AF=0.4534;END=94235393;EUR_AF=0.6302;NS=2504;SAS_AF=0.5613;SITEPOST=0.9721;SVTYPE=DEL\tGT\t0|1\n14\t98494393\tALU_umary_ALU_10518\tT\t<INS:ME:ALU>\t.\t.\tAC=1723;AF=0.34405;AFR_AF=0.202;AMR_AF=0.4625;AN=5008;CS=ALU_umary;EAS_AF=0.2282;EUR_AF=0.5547;MEINFO=AluYb7_2,2,279,-;NS=2504;SAS_AF=0.3548;SITEPOST=1;SVLEN=277;SVTYPE=ALU;TSD=CCAACTCAAAGACAGTT\tGT\t1|0\n14\t98783966\tBI_GS_DEL1_B4_P2308_182\tA\t<CN0>\t100\tPASS\tAC=1537;AF=0.306909;AFR_AF=0.3185;AMR_AF=0.2853;AN=5008;CIEND=0,1;CIPOS=0,1;CS=DEL_union;EAS_AF=0.3304;END=98785085;EUR_AF=0.4314;MC=SI_BD_13774;NS=2504;SAS_AF=0.1544;SVTYPE=DEL\tGT\t1|0\n14\t100844997\tDEL_pindel_41322\tGAAGAATGTTCCAGGCAGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA\tG\t.\tPASS\tAC=2385;AF=0.476238;AFR_AF=0.3797;AMR_AF=0.3963;AN=5008;CS=DEL_pindel;EAS_AF=0.4157;END=100845330;EUR_AF=0.5616;MEINFO=AluYa5,1,281,+;NS=2504;SAS_AF=0.638;SITEPOST=0.9943;SVTYPE=DEL_ALU\tGT\t1|1\n14\t105417023\tYL_CN_ITU_3106\tC\t<CN0>\t100\tPASS\tAC=1454;AF=0.290335;AFR_AF=0.1135;AMR_AF=0.3775;AN=5008;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0.0883;END=105418385;EUR_AF=0.5368;NS=2504;SAS_AF=0.4223;SVTYPE=DEL\tGT\t0|1\n15\t20393078\tDUP_gs_CNV_15_20393078_20419533\tA\t<CN2>,<CN3>,<CN4>,<CN5>\t.\tPASS\tAC=1058,2487,72,43;AF=0.211262,0.496605,0.014377,0.00858626;AFR_AF=0.233,0.438,0.0212,0.0083;AMR_AF=0.1888,0.4697,0.0086,0.0014;AN=5008;CS=DUP_gs;EAS_AF=0.2153,0.5913,0.0169,0.0139;END=20419533;EUR_AF=0.2078,0.5089,0.004,0.003;NS=2504;SAS_AF=0.1973,0.4847,0.0174,0.0143;SITEPOST=0.969;SVTYPE=CNV\tGT\t0|2\n15\t20598942\tDUP_gs_CNV_15_20598942_20625797\tA\t<CN2>,<CN3>,<CN4>,<CN5>,<CN6>,<CN7>,<CN8>,<CN9>\t.\tPASS\tAC=388,1423,854,627,235,62,18,28;AF=0.077476,0.284145,0.170527,0.1252,0.0469249,0.0123802,0.00359425,0.00559105;AFR_AF=0.0658,0.23,0.1944,0.1362,0.0703,0.0053,0.0053,0.0098;AMR_AF=0.1066,0.353,0.1095,0.062,0.0346,0.0058,0,0;AN=5008;CS=DUP_gs;EAS_AF=0.0536,0.249,0.1954,0.1806,0.0228,0.0327,0.003,0.0069;END=20625797;EUR_AF=0.0865,0.2982,0.1869,0.1103,0.0338,0.007,0.002,0.003;NS=2504;SAS_AF=0.0879,0.3303,0.1391,0.1135,0.0624,0.0112,0.0061,0.0051;SITEPOST=0.8692;SVTYPE=CNV\tGT\t2|0\n15\t20846721\tDUP_gs_CNV_15_20846721_20867075\tA\t<CN2>,<CN3>,<CN4>,<CN5>,<CN6>,<CN7>\t.\tPASS\tAC=777,1952,506,486,109,45;AF=0.155152,0.389776,0.101038,0.0970447,0.0217652,0.00898562;AFR_AF=0.1846,0.3759,0.1067,0.0756,0.0076,0.0053;AMR_AF=0.1772,0.3977,0.0865,0.0533,0.0058,0.0014;AN=5008;CS=DUP_gs;EAS_AF=0.123,0.4157,0.0764,0.1181,0.0635,0.0198;END=20867075;EUR_AF=0.1322,0.3966,0.1332,0.0835,0.0159,0.005;NS=2504;SAS_AF=0.1564,0.3691,0.0961,0.1493,0.0153,0.0123;SITEPOST=0.89685;SVTYPE=CNV\tGT\t2|0\n15\t21902635\tDUP_gs_CNV_15_21902635_21929978\tT\t<CN2>,<CN3>,<CN4>,<CN5>,<CN6>,<CN7>\t.\tPASS\tAC=587,1697,775,569,22,41;AF=0.117212,0.338858,0.154752,0.113618,0.00439297,0.0081869;AFR_AF=0.1649,0.3011,0.149,0.0855,0.003,0.0068;AMR_AF=0.1427,0.3833,0.0994,0.062,0.0014,0.0029;AN=5008;CS=DUP_gs;EAS_AF=0.0456,0.3065,0.2183,0.1637,0.0089,0.0139;END=21929978;EUR_AF=0.1203,0.3847,0.1441,0.0924,0.006,0.006;NS=2504;SAS_AF=0.1053,0.3446,0.1472,0.1585,0.002,0.0102;SITEPOST=0.926;SVTYPE=CNV\tGT\t2|0\n15\t22336904\tDUP_gs_CNV_15_22336904_22343964\tT\t<CN0>,<CN2>,<CN3>,<CN4>,<CN5>\t.\tPASS\tAC=1206,1755,113,93,58;AF=0.240815,0.350439,0.0225639,0.0185703,0.0115815;AFR_AF=0.0673,0.3964,0.0787,0.0356,0.0166;AMR_AF=0.4726,0.232,0.0029,0.0072,0;AN=5008;CS=DUP_gs;EAS_AF=0.2242,0.374,0.005,0.0218,0.0129;END=22343964;EUR_AF=0.2913,0.3549,0.001,0.008,0.0089;NS=2504;SAS_AF=0.2761,0.3436,0.001,0.0112,0.0143;SITEPOST=0.98205;SVTYPE=CNV\tGT\t1|0\n15\t22372936\tDUP_gs_CNV_15_22372936_22383193\tA\t<CN0>,<CN2>,<CN3>,<CN4>,<CN5>,<CN6>\t.\tPASS\tAC=354,1775,149,95,18,9;AF=0.0706869,0.354433,0.0297524,0.0189696,0.00359425,0.00179712;AFR_AF=0.0787,0.3828,0.0439,0.0272,0.0045,0.0023;AMR_AF=0.1326,0.2709,0.0115,0.0086,0.0029,0;AN=5008;CS=DUP_gs;EAS_AF=0.0198,0.3849,0.0308,0.0308,0.0069,0.002;END=22383193;EUR_AF=0.0855,0.3499,0.0149,0.0099,0,0;NS=2504;SAS_AF=0.0532,0.3487,0.0378,0.0123,0.0031,0.0041;SITEPOST=0.99125;SVTYPE=CNV\tGT\t0|1\n15\t23671395\tYL_CN_STU_3234\tA\t<CN0>\t100\tPASS\tAC=4899;AF=0.978235;AFR_AF=0.9198;AMR_AF=0.9971;AN=5008;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0.999;END=23674750;EUR_AF=1;MC=YL_CN_PUR_3897;NS=2504;SAS_AF=1;SVTYPE=DEL\tGT\t1|1\n15\t24207057\tDEL_pindel_41554\tTAAAATTACTCCGGCCGGGCGTGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGACGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAA\tT\t.\tPASS\tAC=2257;AF=0.450679;AFR_AF=0.534;AMR_AF=0.3703;AN=5008;CS=DEL_pindel;EAS_AF=0.3948;END=24207366;EUR_AF=0.4692;MEINFO=AluYa5,1,281,+;NS=2504;SAS_AF=0.4335;SITEPOST=0.9995;SVTYPE=DEL_ALU\tGT\t1|1\n15\t24350936\tDUP_gs_CNV_15_24350936_24389975\tG\t<CN0>,<CN2>\t.\tPASS\tAC=16,4;AF=0.00319489,0.00079872;AFR_AF=0.0008,0.0008;AMR_AF=0.0072,0;AN=5008;CS=DUP_gs;EAS_AF=0,0.001;END=24389975;EUR_AF=0.008,0.001;NS=2504;SAS_AF=0.002,0.001;SITEPOST=1;SVTYPE=CNV\tGT\t0|1\n15\t24354619\tYL_CN_MXL_2735\tA\t<CN0>\t100\tPASS\tAC=17;AF=0.00339457;AFR_AF=0.0008;AMR_AF=0.0072;AN=5008;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0;END=24507954;EUR_AF=0.0089;NS=2504;SAS_AF=0.002;SVTYPE=DEL\tGT\t0|1\n15\t24377380\tDUP_gs_CNV_15_24377380_24438730\tT\t<CN0>,<CN2>\t.\tPASS\tAC=33,21;AF=0.00658946,0.00419329;AFR_AF=0.0008,0.0008;AMR_AF=0.0187,0;AN=5008;CS=DUP_gs;EAS_AF=0.001,0.001;END=24438730;EUR_AF=0.0159,0.008;NS=2504;SAS_AF=0.002,0.0112;SITEPOST=1;SVTYPE=CNV\tGT\t1|0\n15\t24384356\tYL_CN_CLM_2842\tA\t<CN0>\t100\tPASS\tAC=34;AF=0.00678914;AFR_AF=0.0008;AMR_AF=0.0187;AN=5008;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0.001;END=24440422;EUR_AF=0.0169;NS=2504;SAS_AF=0.002;SVTYPE=DEL\tGT\t1|0\n15\t24409775\tYL_CN_BEB_2748\tA\t<CN0>\t100\tPASS\tAC=33;AF=0.00658946;AFR_AF=0.0008;AMR_AF=0.0086;AN=5008;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0;END=24485111;EUR_AF=0.0089;MC=EM_DL_DEL31772;NS=2504;SAS_AF=0.0174;SVTYPE=DEL\tGT\t1|0\n15\t24450166\tDUP_gs_CNV_15_24450166_24484075\tT\t<CN0>,<CN2>\t.\tPASS\tAC=42,13;AF=0.00838658,0.00259585;AFR_AF=0.0038,0.0053;AMR_AF=0.0086,0;AN=5008;CS=DUP_gs;EAS_AF=0,0.001;END=24484075;EUR_AF=0.008,0.001;NS=2504;SAS_AF=0.0235,0.0041;SITEPOST=1;SVTYPE=CNV\tGT\t1|0\n15\t24495296\tDUP_gs_CNV_15_24495296_24502596\tA\t<CN0>,<CN2>\t.\tPASS\tAC=27,11;AF=0.00539137,0.00219649;AFR_AF=0.0038,0.0053;AMR_AF=0.0086,0.0014;AN=5008;CS=DUP_gs;EAS_AF=0,0;END=24502596;EUR_AF=0.008,0.001;NS=2504;SAS_AF=0.0082,0.002;SITEPOST=1;SVTYPE=CNV\tGT\t1|0\n15\t24839317\tDEL_pindel_41563\tGCCCTGGTGAACTCTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCCGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGTGCCCGGC\tG\t.\tPASS\tAC=1187;AF=0.237021;AFR_AF=0.3283;AMR_AF=0.1902;AN=5008;CS=DEL_pindel;EAS_AF=0.1677;END=24839639;EUR_AF=0.2694;MEINFO=AluYb6_2,2,281,-;NS=2504;SAS_AF=0.1851;SITEPOST=0.9999;SVTYPE=DEL_ALU\tGT\t1|0\n15\t25116952\tUW_VH_1069\tC\t<CN0>\t100\tPASS\tAC=2119;AF=0.423123;AFR_AF=0.2897;AMR_AF=0.4712;AN=5008;CIEND=0,509;CIPOS=-439,0;CS=DEL_union;EAS_AF=0.5437;END=25118666;EUR_AF=0.4215;MC=YL_CN_GBR_3210,YL_CN_STU_3247,BI_GS_DEL1_B1_P2343_101,YL_CN_JPT_3431,YL_CN_YRI_4123,YL_CN_ESN_3317,YL_CN_ASW_3313,UW_VH_4003,YL_CN_ITU_3208,YL_CN_TSI_3260,UW_VH_4324;NS=2504;SAS_AF=0.4468;SVTYPE=DEL\tGT\t0|1\n15\t28175804\tL1_umary_LINE1_2628\tT\t<INS:ME:LINE1>\t.\t.\tAC=1196;AF=0.238818;AFR_AF=0.0068;AMR_AF=0.2882;AN=5008;CS=L1_umary;EAS_AF=0.5417;EUR_AF=0.1958;MEINFO=LINE1,5658,6019,-;NS=2504;SAS_AF=0.2495;SITEPOST=1;SVLEN=361;SVTYPE=LINE1;TSD=GCTTGCCAACTCTT\tGT\t0|1\n15\t28701268\tDUP_gs_CNV_15_28701268_28709132\tC\t<CN2>,<CN3>,<CN4>,<CN5>,<CN6>\t.\tPASS\tAC=4484,145,21,6,5;AF=0.895367,0.0289537,0.00419329,0.00119808,0.0009984;AFR_AF=0.8941,0.0424,0.0091,0.0015,0;AMR_AF=0.853,0.0375,0.0058,0.0014,0.0058;AN=5008;CS=DUP_gs;EAS_AF=0.9375,0.0119,0.001,0.001,0;END=28709132;EUR_AF=0.8757,0.0139,0.002,0,0;NS=2504;SAS_AF=0.9039,0.0378,0.002,0.002,0.001;SITEPOST=0.999;SVTYPE=CNV\tGT\t1|1\n15\t29411474\tDEL_pindel_41644\tTAAGAATGATGAGTTCATGTCCTTTGTAGGGACATGGATGAAATTGGAAACCATCATTCTCAGTAAACTATCGCAAGAACAAAAAACCAAACACCGCATATTCTCACTCATAGGTGGGAATTGAACAATGAGATCACATGGACACAGGAAGGGGAATATCACACTCTGGGGACTGTGGTGGGGTCGGGGGAGGGGGGAGGGATAGCATTGGGAGATATACCTAATGCTAGATGACACGTTAGTGGGTGCAGCGCACCAGCATGGCACATGTATACATATGTAACTAACCTGCACAATGTGCACATGTACCCTAAAACTTAGAGTATAATAAAAAAAAAATTAAAAATAAATAAATAAATAAATAAAATAAAATAAAATAATAAAATAATTCACAATTCTAGCAAAAAAAAAAAAAAAAAAAAA\tT\t.\tPASS\tAC=3332;AF=0.665335;AFR_AF=0.4879;AMR_AF=0.7277;AN=5008;CS=DEL_pindel;EAS_AF=0.6786;END=29411896;EUR_AF=0.7684;MEINFO=LINE1,5207,5232,+;NS=2504;SAS_AF=0.7413;SITEPOST=0.9965;SVTYPE=DEL_LINE1\tGT\t1|1\n15\t32291220\tDEL_pindel_41710\tTCAGCTCGTGGTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC\tT\t.\tPASS\tAC=2517;AF=0.502596;AFR_AF=0.3238;AMR_AF=0.5677;AN=5008;CS=DEL_pindel;EAS_AF=0.6548;END=32291528;EUR_AF=0.4751;MEINFO=AluYa4_4,1,281,-;NS=2504;SAS_AF=0.5695;SITEPOST=0.9944;SVTYPE=DEL_ALU\tGT\t1|0\n15\t34741739\tDEL_pindel_41757\tCAAAAATGGAAGCTGAGGGAGGCCGAGGCGGGCGAATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAAAATTAGCCGGGCGTGATGGTGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGTTTGCAGTGAGCCGAGATTGCGCCACTGCACTCCCGCCTGGGCCACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAA\tC\t.\tPASS\tAC=2143;AF=0.427915;AFR_AF=0.4713;AMR_AF=0.4986;AN=5008;CS=DEL_pindel;EAS_AF=0.3938;END=34742019;EUR_AF=0.3588;MEINFO=AluYi,37,281,+;NS=2504;SAS_AF=0.4254;SITEPOST=0.9938;SVTYPE=DEL_ALU\tGT\t0|1\n15\t35009016\tDEL_pindel_41766\tACCAAGCAGTGGCTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGGCGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGC\tA\t.\tPASS\tAC=3914;AF=0.78155;AFR_AF=0.7685;AMR_AF=0.7839;AN=5008;CS=DEL_pindel;EAS_AF=0.7907;END=35009351;EUR_AF=0.7863;MEINFO=AluYa4b,2,281,-;NS=2504;SAS_AF=0.7832;SITEPOST=0.9559;SVTYPE=DEL_ALU\tGT\t1|1\n15\t35473633\tALU_umary_ALU_10622\tT\t<INS:ME:ALU>\t.\t.\tAC=1224;AF=0.244409;AFR_AF=0.1089;AMR_AF=0.2896;AN=5008;CS=ALU_umary;EAS_AF=0.4603;EUR_AF=0.1829;MEINFO=AluYa5,1,275,-;NS=2504;SAS_AF=0.2362;SITEPOST=1;SVLEN=274;SVTYPE=ALU;TSD=CCCTGTGTTCACTATTCTT\tGT\t0|1\n15\t39372403\tUW_VH_13203\tC\t<CN0>\t100\tPASS\tAC=2366;AF=0.472444;AFR_AF=0.2995;AMR_AF=0.4813;AN=5008;CIEND=0,467;CIPOS=-602,0;CS=DEL_union;EAS_AF=0.6677;END=39373464;EUR_AF=0.4384;MC=UW_VH_21895,UW_VH_4749,UW_VH_13656,SI_BD_13997,BI_GS_DEL1_B1_P2357_367,EM_DL_DEL10347531,UW_VH_1592;NS=2504;SAS_AF=0.5337;SVTYPE=DEL\tGT\t1|0\n15\t39691605\tALU_umary_ALU_10647\tC\t<INS:ME:ALU>\t.\t.\tAC=1914;AF=0.382188;AFR_AF=0.3162;AMR_AF=0.4539;AN=5008;CS=ALU_umary;EAS_AF=0.3562;EUR_AF=0.4503;MEINFO=AluYc1,36,281,+;NS=2504;SAS_AF=0.3773;SITEPOST=1;SVLEN=245;SVTYPE=ALU;TSD=TAAATGTCTGTGTTC\tGT\t1|1\n15\t39744385\tBI_GS_DEL1_B5_P2357_1030\tG\t<CN0>\t100\tPASS\tAC=3476;AF=0.694089;AFR_AF=0.4304;AMR_AF=0.7853;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.87;END=39744852;EUR_AF=0.7495;MC=UW_VH_1879,DEL_pindel_41865;NS=2504;SAS_AF=0.7474;SVTYPE=DEL\tGT\t1|1\n15\t41100332\tALU_umary_ALU_10654\tT\t<INS:ME:ALU>\t.\t.\tAC=1379;AF=0.275359;AFR_AF=0.2746;AMR_AF=0.2349;AN=5008;CS=ALU_umary;EAS_AF=0.2004;EUR_AF=0.3241;MEINFO=AluUndef,1,281,-;NS=2504;SAS_AF=0.3323;SITEPOST=1;SVLEN=280;SVTYPE=ALU;TSD=CAAAGCTACTCTTT\tGT\t0|1\n15\t41604020\tDEL_pindel_41903\tTCTCAAAGTGCTGGGATTACAGGTGTGAGCCACCGCACCCAGCCAATAAGAATTCTTTTTTTTTTTTTCCACACAGAGTTTCGCTCTCAATGGCAAGCTCTCGGCTCACTGCAACCTCTGCCTCCCAGGTTCAAGCGATTCTCCTGCCTCAGCCTCCCGAAAAGCTGGGATTATAGGCATGCGCCAACACGCCCGGCTAATTTTGTATTTTTAGTAGAGATGGGATTTCTCCATGTTGGTCAGGCTGGTCTCAAACTCCCGACCTGAGGTGATCTGCCTGCCTCAGCCTCCCAAAGTGCTGGGATTACAGGCATAAGCCACCATGCCCAGCCTTCTTTTTTTCTTTTTTTTTTTTTTGAGACAGATTTTCACTCTTGTTGCTCAGGCTAGAGTGCAATGGCATGATCTTGC\tT\t.\tPASS\tAC=457;AF=0.091254;AFR_AF=0.0083;AMR_AF=0.1239;AN=5008;CS=DEL_pindel;EAS_AF=0.0079;END=41604430;EUR_AF=0.2018;NS=2504;SAS_AF=0.1524;SITEPOST=0.9985;SVTYPE=DEL\tGT\t1|0\n15\t42017735\tDEL_pindel_41907\tAAAATAAATAAGTAGGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAATAAATAAATAAAT\tA\t.\tPASS\tAC=3100;AF=0.61901;AFR_AF=0.5287;AMR_AF=0.647;AN=5008;CS=DEL_pindel;EAS_AF=0.6716;END=42018067;EUR_AF=0.6382;MEINFO=AluYa5,1,281,+;NS=2504;SAS_AF=0.6472;SITEPOST=0.9802;SVTYPE=DEL_ALU\tGT\t1|1\n15\t45569912\tALU_umary_ALU_10670\tT\t<INS:ME:ALU>\t.\t.\tAC=1237;AF=0.247005;AFR_AF=0.2685;AMR_AF=0.2262;AN=5008;CS=ALU_umary;EAS_AF=0.0714;EUR_AF=0.3549;MEINFO=AluYa5,1,279,-;NS=2504;SAS_AF=0.3027;SITEPOST=1;SVLEN=278;SVTYPE=ALU;TSD=null\tGT\t0|1\n15\t46067964\tDEL_pindel_41974\tTCAGTACTCAGATTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGTGGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGC\tT\t.\tPASS\tAC=3066;AF=0.61222;AFR_AF=0.6384;AMR_AF=0.7046;AN=5008;CS=DEL_pindel;EAS_AF=0.4444;END=46068314;EUR_AF=0.6958;MEINFO=AluYb6_2,2,281,-;NS=2504;SAS_AF=0.5982;SITEPOST=0.99465;SVTYPE=DEL_ALU\tGT\t1|1\n15\t46126006\tALU_umary_ALU_10674\tC\t<INS:ME:ALU>\t.\t.\tAC=791;AF=0.157947;AFR_AF=0.0461;AMR_AF=0.1455;AN=5008;CS=ALU_umary;EAS_AF=0.2312;EUR_AF=0.2386;MEINFO=AluYa8,3,281,+;NS=2504;SAS_AF=0.1595;SITEPOST=1;SVLEN=278;SVTYPE=ALU;TSD=GAAAATTATGCAAAATCC\tGT\t0|1\n15\t46860705\tBI_GS_DEL1_B4_P2364_197\tC\t<CN0>\t100\tPASS\tAC=1600;AF=0.319489;AFR_AF=0.4365;AMR_AF=0.1254;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.4276;END=46861165;EUR_AF=0.166;MC=DEL_pindel_41990;NS=2504;SAS_AF=0.3456;SVTYPE=DEL\tGT\t1|0\n15\t47507342\tL1_umary_LINE1_2640\tA\t<INS:ME:LINE1>\t.\t.\tAC=1431;AF=0.285743;AFR_AF=0.4569;AMR_AF=0.268;AN=5008;CS=L1_umary;EAS_AF=0.0913;EUR_AF=0.3171;MEINFO=LINE1,21,6019,-;NS=2504;SAS_AF=0.2352;SITEPOST=1;SVLEN=5998;SVTYPE=LINE1;TSD=TTCAATTGCATTTA\tGT\t1|1\n15\t47720633\tDEL_pindel_41995\tGTAAAAAAGTATTTAGGCGCAGATCTACCCTTAAAAGTGGGTAAAATGGGGCAAGGTGCAGTGGGTCACACCTGTAATCCCAGCACTTTAGGATTTAGGAGGCCAAGGTAGGTGGATTGCTTGAGGTCAAGAGTTCAAGACCAACATGGCCAACAGGAGGAAGCCCTGTCTCTAC\tG\t.\tPASS\tAC=2559;AF=0.510982;AFR_AF=0.4652;AMR_AF=0.5245;AN=5008;CS=DEL_pindel;EAS_AF=0.5149;END=47720807;EUR_AF=0.5368;NS=2504;SAS_AF=0.5327;SITEPOST=0.9983;SVTYPE=DEL\tGT\t1|1\n15\t49544866\tUW_VH_2259\tT\t<CN0>\t100\tPASS\tAC=631;AF=0.125998;AFR_AF=0.0787;AMR_AF=0.1513;AN=5008;CIEND=0,360;CIPOS=-429,0;CS=DEL_union;EAS_AF=0.006;END=49547867;EUR_AF=0.2316;MC=UW_VH_24870,SI_BD_14058,UW_VH_17669,BI_GS_DEL1_B2_P2367_357,YL_CN_BEB_2784;NS=2504;SAS_AF=0.1871;SVTYPE=DEL\tGT\t1|0\n15\t52525183\tDEL_pindel_42092\tAAAATAAATAGAGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCAAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGTGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAATTAAAAAAAAAAAAAAATAAAT\tA\t.\tPASS\tAC=2423;AF=0.483826;AFR_AF=0.4183;AMR_AF=0.6009;AN=5008;CS=DEL_pindel;EAS_AF=0.3175;END=52525516;EUR_AF=0.663;MEINFO=AluYa5,1,281,+;NS=2504;SAS_AF=0.4765;SITEPOST=0.9925;SVTYPE=DEL_ALU\tGT\t0|1\n15\t54188220\tALU_umary_ALU_10716\tC\t<INS:ME:ALU>\t.\t.\tAC=839;AF=0.167532;AFR_AF=0.1861;AMR_AF=0.2003;AN=5008;CS=ALU_umary;EAS_AF=0.2103;EUR_AF=0.1103;MEINFO=AluYc1,1,281,+;NS=2504;SAS_AF=0.1339;SITEPOST=1;SVLEN=280;SVTYPE=ALU;TSD=TAAAATGCATCTC\tGT\t0|1\n15\t55429892\tDEL_pindel_42144\tGTAAAGCAAGTTCTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCCGGACTGCGGACTGCAGTGGCGCGATCTTGGCTCACTGCAAGCTCCGCTTCCTGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTTTTGTATTTTTAGTAGAGATGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC\tG\t.\tPASS\tAC=3091;AF=0.617212;AFR_AF=0.5809;AMR_AF=0.634;AN=5008;CS=DEL_pindel;EAS_AF=0.63;END=55430213;EUR_AF=0.6412;MEINFO=AluYb,1,281,-;NS=2504;SAS_AF=0.6166;SITEPOST=0.9505;SVTYPE=DEL_ALU\tGT\t0|1\n15\t58282108\tDEL_pindel_42195\tCAAAAATGACAGGACGGAGCTTGCAGTGAGCCGAGATTGCGTCACTGCAGTCCGCAGTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAA\tC\t.\tPASS\tAC=1709;AF=0.341254;AFR_AF=0.3389;AMR_AF=0.3617;AN=5008;CS=DEL_pindel;EAS_AF=0.3006;END=58282214;EUR_AF=0.4682;MEINFO=AluYb,211,281,+;NS=2504;SAS_AF=0.2413;SITEPOST=0.9989;SVTYPE=DEL_ALU\tGT\t1|1\n15\t59712886\tDEL_pindel_42211\tAAGGAAGGCTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTGTCGCCCAGGCTGGAGTGCAGTGGCGCAATCTCGGCTCACTGCAGGCTCCGCCCCCTGGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCTCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC\tA\t.\tPASS\tAC=4306;AF=0.859824;AFR_AF=0.8442;AMR_AF=0.8689;AN=5008;CS=DEL_pindel;EAS_AF=0.8482;END=59713217;EUR_AF=0.8767;MEINFO=AluYe,1,281,-;NS=2504;SAS_AF=0.8691;SITEPOST=0.9807;SVTYPE=DEL_ALU\tGT\t1|1\n15\t61328974\tL1_umary_LINE1_2659\tT\t<INS:ME:LINE1>\t.\t.\tAC=398;AF=0.0794728;AFR_AF=0.1271;AMR_AF=0.0504;AN=5008;CS=L1_umary;EAS_AF=0.0327;EUR_AF=0.0706;MEINFO=LINE1,4552,6019,-;NS=2504;SAS_AF=0.093;SITEPOST=1;SVLEN=1467;SVTYPE=LINE1;TSD=TAGAGCAGAGATTTCT\tGT\t1|0\n15\t64633178\tDEL_pindel_42300\tTAATTTTTATCTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCCGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGGTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCAATCTCTTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC\tT\t.\tPASS\tAC=2831;AF=0.565296;AFR_AF=0.5295;AMR_AF=0.6182;AN=5008;CS=DEL_pindel;EAS_AF=0.5923;END=64633503;EUR_AF=0.6193;MEINFO=AluYb6_2,1,281,-;NS=2504;SAS_AF=0.4928;SITEPOST=0.9752;SVTYPE=DEL_ALU\tGT\t1|1\n15\t64664107\tDEL_pindel_42301\tTTTTTAACCCACCTCCTGCACAAAAAATGGTCAATTTTTAAGTTGTAAAAATTATTCAACATGTACAAAGTCACCTCTTAATTTCAAGATTAATCAAATACGCCTTCAAAGGAAATCAAC\tT\t.\tPASS\tAC=2536;AF=0.50639;AFR_AF=0.4448;AMR_AF=0.6081;AN=5008;CS=DEL_pindel;EAS_AF=0.5933;END=64664226;EUR_AF=0.5616;NS=2504;SAS_AF=0.3712;SITEPOST=0.9893;SVTYPE=DEL\tGT\t0|1\n15\t66633812\tDEL_pindel_42359\tTAAGAATGTTGTGGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAACACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAA\tT\t.\tPASS\tAC=4083;AF=0.815296;AFR_AF=0.7988;AMR_AF=0.8271;AN=5008;CS=DEL_pindel;EAS_AF=0.8214;END=66634133;EUR_AF=0.8181;MEINFO=AluYa4_1,1,281,+;NS=2504;SAS_AF=0.82;SITEPOST=0.9665;SVTYPE=DEL_ALU\tGT\t1|1\n15\t66877660\tBI_GS_DEL1_B1_P2384_748\tC\t<CN0>\t100\tPASS\tAC=934;AF=0.186502;AFR_AF=0.1135;AMR_AF=0.2637;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.0744;END=66878428;EUR_AF=0.2416;MC=UW_VH_1087;NS=2504;SAS_AF=0.2894;SVTYPE=DEL\tGT\t1|0\n15\t67868283\tUW_VH_2439\tA\t<CN0>\t100\tPASS\tAC=690;AF=0.13778;AFR_AF=0.059;AMR_AF=0.098;AN=5008;CIEND=0,394;CIPOS=-317,0;CS=DEL_union;EAS_AF=0.2212;END=67869396;EUR_AF=0.1372;MC=BI_GS_DEL1_B1_P2385_836;NS=2504;SAS_AF=0.1871;SVTYPE=DEL\tGT\t0|1\n15\t70408637\tALU_umary_ALU_10797\tC\t<INS:ME:ALU>\t.\t.\tAC=2151;AF=0.429513;AFR_AF=0.4501;AMR_AF=0.4121;AN=5008;CS=ALU_umary;EAS_AF=0.376;EUR_AF=0.4125;MEINFO=AluYa5,1,281,+;NS=2504;SAS_AF=0.4867;SITEPOST=1;SVLEN=280;SVTYPE=ALU;TSD=AAAAAAAAGAGCGTC\tGT\t1|0\n15\t71708614\tUW_VH_3789\tA\t<CN0>\t100\tPASS\tAC=2520;AF=0.503195;AFR_AF=0.4266;AMR_AF=0.6643;AN=5008;CIEND=0,420;CIPOS=-474,0;CS=DEL_union;EAS_AF=0.5784;END=71713685;EUR_AF=0.4811;MC=SI_BD_14166,YL_CN_PUR_3972,EM_DL_DEL33617;NS=2504;SAS_AF=0.4376;SVTYPE=DEL\tGT\t1|0\n15\t71881570\tBI_GS_DEL1_B4_P2389_174\tA\t<CN0>\t100\tPASS\tAC=991;AF=0.197883;AFR_AF=0.09;AMR_AF=0.2363;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.1944;END=71882968;EUR_AF=0.3191;MC=YL_CN_FIN_3092,SI_BD_14169,YL_CN_GBR_3269,UW_VH_1090,EM_DL_DEL10362248,YL_CN_GWD_4543;NS=2504;SAS_AF=0.1953;SVTYPE=DEL\tGT\t1|0\n15\t72385965\tEM_DL_DEL33633\tA\t<CN0>\t100\tPASS\tAC=2263;AF=0.451877;AFR_AF=0.059;AMR_AF=0.6052;AN=5008;CIEND=-150,150;CIPOS=-150,150;CS=DEL_union;EAS_AF=0.3601;END=72388158;EUR_AF=0.7416;MC=YL_CN_CHB_3331,YL_CN_CHS_3405,YL_CN_ACB_3761,YL_CN_MSL_3084,BI_GS_DEL1_B1_P2390_279;NS=2504;SAS_AF=0.6708;SVTYPE=DEL\tGT\t1|1\n15\t72639551\tALU_umary_ALU_10809\tT\t<INS:ME:ALU>\t.\t.\tAC=1921;AF=0.383586;AFR_AF=0.1641;AMR_AF=0.415;AN=5008;CS=ALU_umary;EAS_AF=0.4405;EUR_AF=0.5;MEINFO=AluUndef,1,281,-;NS=2504;SAS_AF=0.4796;SITEPOST=1;SVLEN=280;SVTYPE=ALU;TSD=CAGAAATAGTTCTT\tGT\t0|1\n15\t73983319\tALU_umary_ALU_10812\tT\t<INS:ME:ALU>\t.\t.\tAC=1163;AF=0.232228;AFR_AF=0.121;AMR_AF=0.2464;AN=5008;CS=ALU_umary;EAS_AF=0.2738;EUR_AF=0.3171;MEINFO=AluYa4_4,1,281,-;NS=2504;SAS_AF=0.2423;SITEPOST=1;SVLEN=280;SVTYPE=ALU;TSD=TATGCTTTT\tGT\t1|1\n15\t76884546\tDUP_gs_CNV_15_76884546_76895794\tA\t<CN0>,<CN2>\t.\tPASS\tAC=1545,1;AF=0.308506,0.00019968;AFR_AF=0.0666,0;AMR_AF=0.536,0;AN=5008;CS=DUP_gs;EAS_AF=0.2619,0;END=76895794;EUR_AF=0.505,0.001;MC=EM_DL_DEL33767,BI_GS_DEL1_B1_P2394_751,YL_CN_CDX_2818,SI_BD_14203;NS=2504;SAS_AF=0.32,0;SITEPOST=1;SVTYPE=CNV\tGT\t0|1\n15\t77092501\tALU_umary_ALU_10821\tT\t<INS:ME:ALU>\t.\t.\tAC=1055;AF=0.210663;AFR_AF=0.0424;AMR_AF=0.33;AN=5008;CS=ALU_umary;EAS_AF=0.1905;EUR_AF=0.3539;MEINFO=AluUndef,25,281,-;NS=2504;SAS_AF=0.227;SITEPOST=1;SVLEN=256;SVTYPE=ALU;TSD=ATACATGGATATTTTT\tGT\t0|1\n15\t77330749\tBI_GS_DEL1_B4_P2395_67\tC\t<CN0>\t100\tPASS\tAC=1912;AF=0.381789;AFR_AF=0.0703;AMR_AF=0.5288;AN=5008;CIEND=-1,2;CIPOS=-1,2;CS=DEL_union;EAS_AF=0.3016;END=77332719;EUR_AF=0.6789;MC=UW_VH_7722,EM_DL_DEL10364514,SI_BD_14206,YL_CN_FIN_3099;NS=2504;SAS_AF=0.4755;SVTYPE=DEL\tGT\t1|0\n15\t77851960\tBI_GS_DEL1_B3_P2395_29\tA\t<CN0>\t100\tPASS\tAC=224;AF=0.0447284;AFR_AF=0.0076;AMR_AF=0.1037;AN=5008;CIEND=-3,3;CIPOS=-3,3;CS=DEL_union;EAS_AF=0.006;END=77853175;EUR_AF=0.0755;MC=EM_DL_DEL10364697;NS=2504;SAS_AF=0.0613;SVTYPE=DEL\tGT\t0|1\n15\t77910861\tDEL_pindel_42579\tACTGTTATTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTTGTATTTTTTTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGCCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGC\tA\t.\tPASS\tAC=4108;AF=0.820288;AFR_AF=0.8366;AMR_AF=0.8343;AN=5008;CS=DEL_pindel;EAS_AF=0.8393;END=77911235;EUR_AF=0.8231;MEINFO=AluYa5a1,2,281,-;NS=2504;SAS_AF=0.7658;SITEPOST=0.9716;SVTYPE=DEL_ALU\tGT\t0|1\n15\t79084263\tDEL_pindel_42616\tGGAAATGGCTGGGGAAAGCCATCTGCTCTTTTAAAACTCCCTCAGAACAAAAAAGAGGCCAGCCCATGACTGGGGACAGCTGGCAGGTTCCCA\tG\t.\tPASS\tAC=1118;AF=0.223243;AFR_AF=0.0961;AMR_AF=0.2882;AN=5008;CS=DEL_pindel;EAS_AF=0.0913;END=79084355;EUR_AF=0.4215;NS=2504;SAS_AF=0.2812;SITEPOST=1;SVTYPE=DEL\tGT\t0|1\n15\t79891843\tDEL_pindel_42634\tTAGAAGCACAGAGGGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATTCTGGCTAACACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTGGTAGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCGCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAA\tT\t.\tPASS\tAC=2058;AF=0.410942;AFR_AF=0.4175;AMR_AF=0.2882;AN=5008;CS=DEL_pindel;EAS_AF=0.5754;END=79892164;EUR_AF=0.33;MEINFO=AluYc1,1,281,+;NS=2504;SAS_AF=0.4029;SITEPOST=0.9997;SVTYPE=DEL_ALU\tGT\t0|1\n15\t83551623\tBI_GS_DEL1_B1_P2401_259\tC\t<CN0>\t100\tPASS\tAC=3296;AF=0.658147;AFR_AF=0.6921;AMR_AF=0.6081;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.8452;END=83557675;EUR_AF=0.5606;MEINFO=LINE1,2,6019,-;NS=2504;SAS_AF=0.5552;SVTYPE=DEL_LINE1\tGT\t1|0\n15\t86057007\tBI_GS_DEL1_B2_P2404_39\tC\t<CN0>\t100\tPASS\tAC=1146;AF=0.228834;AFR_AF=0.3805;AMR_AF=0.2176;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.1766;END=86059202;EUR_AF=0.1909;MC=UW_VH_17773,UW_VH_12155,YL_CN_TSI_3320,EM_DL_DEL34076,UW_VH_5355,UW_VH_24772,UW_VH_20492,UW_VH_1596,UW_VH_20965,SI_BD_14248,UW_VH_17703;NS=2504;SAS_AF=0.1247;SVTYPE=DEL\tGT\t1|0\n15\t91402096\tDEL_pindel_42869\tTAGAAATGTCTTTCATAGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTGGTAGCGGGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCGCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGATTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAA\tT\t.\tPASS\tAC=1567;AF=0.312899;AFR_AF=0.4516;AMR_AF=0.3026;AN=5008;CS=DEL_pindel;EAS_AF=0.1577;END=91402416;EUR_AF=0.3151;MEINFO=AluYc1,1,281,+;NS=2504;SAS_AF=0.2904;SITEPOST=0.9919;SVTYPE=DEL_ALU\tGT\t0|1\n15\t94819903\tALU_umary_ALU_10897\tG\t<INS:ME:ALU>\t.\t.\tAC=971;AF=0.19389;AFR_AF=0.3253;AMR_AF=0.1585;AN=5008;CS=ALU_umary;EAS_AF=0.1667;EUR_AF=0.1342;MEINFO=AluYa5,5,281,+;NS=2504;SAS_AF=0.1309;SITEPOST=1;SVLEN=276;SVTYPE=ALU;TSD=AAATAAGAAATATTTGG\tGT\t0|1\n15\t94933278\tDEL_pindel_42927\tCATATATATATATATATATATATATATATATATATATATATGTATATATATATATATATATATATGTAT\tC\t.\tPASS\tAC=1394;AF=0.278355;AFR_AF=0.0983;AMR_AF=0.3746;AN=5008;CS=DEL_pindel;EAS_AF=0.2599;END=94933346;EUR_AF=0.4901;NS=2504;SAS_AF=0.2546;SITEPOST=0.994;SVTYPE=DEL\tGT\t1|0\n15\t98817015\tBI_GS_DEL1_B2_P2416_642\tA\t<CN0>\t100\tPASS\tAC=1648;AF=0.329073;AFR_AF=0.1513;AMR_AF=0.3631;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.3175;END=98817425;EUR_AF=0.4344;NS=2504;SAS_AF=0.4489;SVTYPE=DEL\tGT\t1|0\n15\t98842312\tUW_VH_23924\tA\t<CN0>\t100\tPASS\tAC=1070;AF=0.213658;AFR_AF=0.2352;AMR_AF=0.2896;AN=5008;CIEND=0,411;CIPOS=-313,0;CS=DEL_union;EAS_AF=0.2034;END=98843808;EUR_AF=0.1203;MC=BI_GS_DEL1_B2_P2416_667,EM_DL_DEL10374044,UW_VH_1100,UW_VH_10238,SI_BD_14323,YL_CN_LWK_3222,YL_CN_PEL_3039;NS=2504;SAS_AF=0.2372;SVTYPE=DEL\tGT\t1|0\n15\t98900055\tBI_GS_DEL1_B4_P2416_204\tC\t<CN0>\t100\tPASS\tAC=2420;AF=0.483227;AFR_AF=0.4448;AMR_AF=0.402;AN=5008;CIEND=-1,1;CIPOS=-1,1;CS=DEL_union;EAS_AF=0.6905;END=98900632;EUR_AF=0.4095;MC=SI_BD_14324,UW_VH_1101;NS=2504;SAS_AF=0.455;SVTYPE=DEL\tGT\t1|1\n15\t99574506\tBI_GS_DEL1_B1_P2417_554\tT\t<CN0>\t100\tPASS\tAC=2729;AF=0.544928;AFR_AF=0.3654;AMR_AF=0.5591;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.5367;END=99575633;EUR_AF=0.7117;MC=UW_VH_14448,UW_VH_4608,UW_VH_6166,UW_VH_25235,UW_VH_15151,YL_CN_GWD_4591,UW_VH_18942,EM_DL_DEL10374467,UW_VH_19444,UW_VH_20581,UW_VH_14324,UW_VH_11566,UW_VH_18725,UW_VH_20439,UW_VH_5292,UW_VH_14531,UW_VH_13125,UW_VH_11667,UW_VH_17256,UW_VH_12849,UW_VH_12106,UW_VH_16719,UW_VH_13319,UW_VH_13789,UW_VH_38,UW_VH_19346,UW_VH_3040,UW_VH_21743,UW_VH_20938;NS=2504;SAS_AF=0.6145;SVTYPE=DEL\tGT\t1|1\n15\t99630150\tALU_umary_ALU_10918\tG\t<INS:ME:ALU>\t.\t.\tAC=2507;AF=0.500599;AFR_AF=0.503;AMR_AF=0.4856;AN=5008;CS=ALU_umary;EAS_AF=0.5089;EUR_AF=0.502;MEINFO=AluY,53,191,-;NS=2504;SAS_AF=0.498;SITEPOST=1;SVLEN=138;SVTYPE=ALU;TSD=CAGGTGTG\tGT\t1|0\n15\t100097884\tDEL_pindel_43033\tACCCAGGGGGCGGAGGATGCAGTGAGCCAAGATGGAGCCACTGCACTCCAG\tA\t.\tPASS\tAC=1094;AF=0.21845;AFR_AF=0.0514;AMR_AF=0.2118;AN=5008;CS=DEL_pindel;EAS_AF=0.251;END=100097934;EUR_AF=0.3062;NS=2504;SAS_AF=0.3252;SITEPOST=0.9999;SVTYPE=DEL\tGT\t0|1\n15\t100416670\tUW_VH_11486\tG\t<CN0>\t100\tPASS\tAC=973;AF=0.194289;AFR_AF=0.0189;AMR_AF=0.1902;AN=5008;CIEND=0,362;CIPOS=-494,0;CS=DEL_union;EAS_AF=0.3383;END=100423244;EUR_AF=0.2276;MC=UW_VH_20953,BI_GS_DEL1_B5_P2418_491,UW_VH_2694,EM_DL_DEL34270,SI_BD_14330,YL_CN_ITU_3288,UW_VH_20905;NS=2504;SAS_AF=0.2515;SVTYPE=DEL\tGT\t1|0\n15\t100609946\tBI_GS_DEL1_B1_P2418_589\tA\t<CN0>\t100\tPASS\tAC=311;AF=0.0621006;AFR_AF=0.0779;AMR_AF=0.0677;AN=5008;CIEND=-33,34;CIPOS=-33,34;CS=DEL_union;EAS_AF=0.0645;END=100612578;EUR_AF=0.0696;MC=YL_CN_GWD_4596;NS=2504;SAS_AF=0.0266;SVTYPE=DEL\tGT\t1|0\n15\t100810993\tALU_umary_ALU_10921\tT\t<INS:ME:ALU>\t.\t.\tAC=2747;AF=0.548522;AFR_AF=0.5197;AMR_AF=0.5317;AN=5008;CS=ALU_umary;EAS_AF=0.621;EUR_AF=0.4692;MEINFO=AluUndef,4,280,-;NS=2504;SAS_AF=0.6063;SITEPOST=1;SVLEN=276;SVTYPE=ALU;TSD=CCATTTTAAACATTTTT\tGT\t0|1\n16\t998832\tUW_VH_24834\tG\t<CN0>\t100\tPASS\tAC=2661;AF=0.53135;AFR_AF=0.7148;AMR_AF=0.4914;AN=5008;CIEND=0,444;CIPOS=-185,0;CS=DEL_union;EAS_AF=0.4097;END=1000718;EUR_AF=0.3678;NS=2504;SAS_AF=0.6053;SVTYPE=DEL\tGT\t1|1\n16\t5180176\tBI_GS_DEL1_B1_P2426_129\tT\t<CN0>\t100\tPASS\tAC=191;AF=0.038139;AFR_AF=0.0038;AMR_AF=0.049;AN=5008;CIEND=-1,1;CIPOS=-1,1;CS=DEL_union;EAS_AF=0;END=5180669;EUR_AF=0.0885;NS=2504;SAS_AF=0.0644;SVTYPE=DEL\tGT\t0|1\n16\t6957702\tUW_VH_1598\tG\t<CN0>\t100\tPASS\tAC=61;AF=0.0121805;AFR_AF=0.0015;AMR_AF=0.0101;AN=5008;CIEND=0,270;CIPOS=-324,0;CS=DEL_union;EAS_AF=0;END=6958488;EUR_AF=0.0487;MC=BI_GS_DEL1_B5_P2427_1251,SI_BD_14445;NS=2504;SAS_AF=0.0031;SVTYPE=DEL\tGT\t1|0\n16\t8535509\tALU_umary_ALU_10954\tA\t<INS:ME:ALU>\t.\t.\tAC=1703;AF=0.340056;AFR_AF=0.2655;AMR_AF=0.3501;AN=5008;CS=ALU_umary;EAS_AF=0.3998;EUR_AF=0.2724;MEINFO=AluUndef,38,281,+;NS=2504;SAS_AF=0.4417;SITEPOST=1;SVLEN=243;SVTYPE=ALU;TSD=AGAAACATCCTGAGAA\tGT\t0|1\n16\t8755309\tUW_VH_12510\tC\t<CN0>\t100\tPASS\tAC=766;AF=0.152955;AFR_AF=0.1989;AMR_AF=0.1643;AN=5008;CIEND=0,426;CIPOS=-364,0;CS=DEL_union;EAS_AF=0.0804;END=8756834;EUR_AF=0.1382;MC=UW_VH_2956,YL_CN_PEL_3071,YL_CN_CLM_2946,UW_VH_17424,EM_DL_DEL10380546,BI_GS_DEL1_B1_P2429_676,UW_VH_23336,YL_CN_YRI_4308;NS=2504;SAS_AF=0.1728;SVTYPE=DEL\tGT\t0|1\n16\t11683732\tBI_GS_DEL1_B1_P2432_635\tG\t<CN0>\t100\tPASS\tAC=2241;AF=0.447484;AFR_AF=0.6331;AMR_AF=0.3242;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.5556;END=11685291;EUR_AF=0.3191;MC=UW_VH_1104,EM_DL_DEL10381738,YL_CN_MXL_2845,YL_CN_TSI_3360,YL_CN_PUR_4062,UW_VH_11718,YL_CN_CHS_3490,YL_CN_MSL_3138,YL_CN_ITU_3324,UW_VH_17721,YL_CN_KHV_3486,YL_CN_STU_3373,SI_BD_14475,YL_CN_ESN_3430;NS=2504;SAS_AF=0.3047;SVTYPE=DEL\tGT\t0|1\n16\t14075622\tDEL_pindel_43472\tTGCCTATACCTATTCTCATAAGGCCTGTCCTGATGCAGGATGGAAATGGGGGCTATAGGGAAAGGGCACTCAACTCTCTTTGTGTCACTAGATAATAGCTCAGAACTCTGAGGAACCTGG\tT\t.\tPASS\tAC=3756;AF=0.75;AFR_AF=0.4894;AMR_AF=0.7867;AN=5008;CS=DEL_pindel;EAS_AF=0.9246;END=14075741;EUR_AF=0.7346;NS=2504;SAS_AF=0.9121;SITEPOST=0.9997;SVTYPE=DEL\tGT\t1|1\n16\t15059676\tDUP_gs_CNV_16_15059676_15076875\tA\t<CN2>,<CN3>\t.\tPASS\tAC=3029,18;AF=0.604832,0.00359425;AFR_AF=0.711,0.0045;AMR_AF=0.5793,0.0029;AN=5008;CS=DUP_gs;EAS_AF=0.3165,0.002;END=15076875;EUR_AF=0.8082,0.003;NS=2504;SAS_AF=0.5675,0.0051;SITEPOST=0.9998;SVTYPE=CNV\tGT\t1|1\n16\t15080267\tDUP_gs_CNV_16_15080267_15105113\tA\t<CN2>,<CN3>\t.\tPASS\tAC=3042,19;AF=0.607428,0.00379393;AFR_AF=0.7156,0.003;AMR_AF=0.5807,0.0043;AN=5008;CS=DUP_gs;EAS_AF=0.3194,0.002;END=15105113;EUR_AF=0.8082,0.004;NS=2504;SAS_AF=0.5706,0.0061;SITEPOST=1;SVTYPE=CNV\tGT\t1|1\n16\t15099303\tDUP_gs_CNV_16_15099303_15123498\tT\t<CN2>,<CN3>\t.\tPASS\tAC=3025,19;AF=0.604034,0.00379393;AFR_AF=0.7118,0.0045;AMR_AF=0.5821,0.0043;AN=5008;CS=DUP_gs;EAS_AF=0.3135,0.002;END=15123498;EUR_AF=0.8042,0.003;NS=2504;SAS_AF=0.5675,0.0051;SITEPOST=1;SVTYPE=CNV\tGT\t1|1\n16\t16631704\tDUP_gs_CNV_16_16631704_16651111\tG\t<CN0>,<CN2>\t.\tPASS\tAC=107,243;AF=0.0213658,0.0485224;AFR_AF=0.0227,0.0749;AMR_AF=0.0086,0.0173;AN=5008;CS=DUP_gs;EAS_AF=0.0585,0.0516;END=16651111;EUR_AF=0.004,0.0288;NS=2504;SAS_AF=0.0082,0.0521;SITEPOST=0.9986;SVTYPE=CNV\tGT\t2|0\n16\t19230429\tDEL_pindel_43528\tAAATAATAAAACAAGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGCGGTGGCGGGCGCCTGTAGTCCCAGCTACTGGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCCGGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATAATAATAATAAT\tA\t.\tPASS\tAC=3476;AF=0.694089;AFR_AF=0.739;AMR_AF=0.6499;AN=5008;CS=DEL_pindel;EAS_AF=0.7232;END=19230781;EUR_AF=0.6183;MEINFO=AluYb6_2,1,281,+;NS=2504;SAS_AF=0.7127;SITEPOST=0.98335;SVTYPE=DEL_ALU\tGT\t1|1\n16\t21239067\tALU_umary_ALU_10995\tT\t<INS:ME:ALU>\t.\t.\tAC=960;AF=0.191693;AFR_AF=0.1422;AMR_AF=0.2896;AN=5008;CS=ALU_umary;EAS_AF=0.1091;EUR_AF=0.2555;MEINFO=AluUndef,1,281,-;NS=2504;SAS_AF=0.2086;SITEPOST=1;SVLEN=280;SVTYPE=ALU;TSD=CCTGCAAGTTTTCT\tGT\t1|1\n16\t21518346\tDUP_gs_CNV_16_21518346_21544882\tG\t<CN0>,<CN2>,<CN3>,<CN4>,<CN5>\t.\tPASS\tAC=4,4279,30,3,1;AF=0.00079872,0.854433,0.00599042,0.00059904,0.00019968;AFR_AF=0,0.9561,0.0061,0,0;AMR_AF=0.0029,0.8357,0.0043,0,0;AN=5008;CS=DUP_gs;EAS_AF=0,0.7361,0.006,0.001,0;END=21544882;EUR_AF=0.002,0.8807,0.005,0,0;NS=2504;SAS_AF=0,0.8252,0.0082,0.002,0.001;SITEPOST=0.9999;SVTYPE=CNV\tGT\t2|2\n16\t21541685\tDUP_gs_CNV_16_21541685_21569415\tG\t<CN0>,<CN2>,<CN3>,<CN4>,<CN5>\t.\tPASS\tAC=5,4249,13,5,2;AF=0.0009984,0.848442,0.00259585,0.0009984,0.00039936;AFR_AF=0,0.9501,0.003,0.0008,0;AMR_AF=0.0014,0.8242,0.0014,0,0;AN=5008;CS=DUP_gs;EAS_AF=0.001,0.7163,0.005,0.002,0;END=21569415;EUR_AF=0.001,0.8777,0.001,0.001,0;NS=2504;SAS_AF=0.002,0.8344,0.002,0.001,0.002;SITEPOST=0.9995;SVTYPE=CNV\tGT\t2|2\n16\t21573321\tDUP_gs_CNV_16_21573321_21580382\tG\t<CN2>,<CN3>,<CN4>,<CN5>\t.\tPASS\tAC=4294,26,4,1;AF=0.857428,0.00519169,0.00079872,0.00019968;AFR_AF=0.9576,0.0053,0,0;AMR_AF=0.8401,0.0029,0,0;AN=5008;CS=DUP_gs;EAS_AF=0.745,0.0079,0.002,0;END=21580382;EUR_AF=0.8847,0.005,0,0;NS=2504;SAS_AF=0.8221,0.0041,0.002,0.001;SITEPOST=0.9999;SVTYPE=CNV\tGT\t1|1\n16\t21588291\tDUP_gs_CNV_16_21588291_21593314\tC\t<CN2>,<CN3>,<CN4>\t.\tPASS\tAC=4287,14,6;AF=0.85603,0.00279553,0.00119808;AFR_AF=0.9637,0.0015,0.0015;AMR_AF=0.8429,0.0029,0;AN=5008;CS=DUP_gs;EAS_AF=0.7381,0.003,0.002;END=21593314;EUR_AF=0.8817,0.003,0;NS=2504;SAS_AF=0.8149,0.0041,0.002;SITEPOST=0.9982;SVTYPE=CNV\tGT\t1|1\n16\t22611652\tDUP_gs_CNV_16_22611652_22662020\tA\t<CN2>,<CN3>,<CN4>,<CN5>\t.\tPASS\tAC=4305,40,4,1;AF=0.859625,0.00798722,0.00079872,0.00019968;AFR_AF=0.9607,0.0053,0,0;AMR_AF=0.8372,0.0086,0,0;AN=5008;CS=DUP_gs;EAS_AF=0.75,0.0079,0.002,0;END=22662020;EUR_AF=0.8837,0.0099,0,0;NS=2504;SAS_AF=0.8272,0.0092,0.002,0.001;SITEPOST=1;SVTYPE=CNV\tGT\t1|1\n16\t22623100\tDUP_uwash_chr16_22623100_22783757\tC\t<CN2>,<CN3>,<CN4>\t.\tPASS\tAC=4413,37,1;AF=0.88119,0.00738818,0.00019968;AFR_AF=0.9682,0.0053,0;AMR_AF=0.8689,0.0043,0;AN=5008;CS=DUP_uwash;EAS_AF=0.7857,0.0079,0;END=22783757;EUR_AF=0.9046,0.008,0;NS=2504;SAS_AF=0.8466,0.0112,0.001;SITEPOST=1;SVTYPE=CNV\tGT\t1|1\n16\t22650742\tDUP_gs_CNV_16_22650742_22695701\tA\t<CN2>,<CN3>,<CN4>,<CN5>\t.\tPASS\tAC=4305,42,4,1;AF=0.859625,0.00838658,0.00079872,0.00019968;AFR_AF=0.9607,0.0053,0,0;AMR_AF=0.8372,0.0086,0,0;AN=5008;CS=DUP_gs;EAS_AF=0.749,0.0089,0.002,0;END=22695701;EUR_AF=0.8847,0.0109,0,0;NS=2504;SAS_AF=0.8272,0.0092,0.002,0.001;SITEPOST=1;SVTYPE=CNV\tGT\t1|1\n16\t23047727\tUW_VH_10999\tC\t<CN0>\t100\tPASS\tAC=3661;AF=0.73103;AFR_AF=0.8593;AMR_AF=0.4914;AN=5008;CIEND=0,502;CIPOS=-485,0;CS=DEL_union;EAS_AF=0.7778;END=23049533;EUR_AF=0.663;MC=UW_VH_4982,YL_CN_IBS_3130,YL_CN_BEB_2906,YL_CN_CHB_3459,YL_CN_TSI_3424,YL_CN_ASW_3498,YL_CN_GWD_4713,UW_VH_14568,YL_CN_STU_3446,UW_VH_3132,YL_CN_CEU_4314,YL_CN_ESN_3502,YL_CN_KHV_3553,YL_CN_ACB_3914,UW_VH_2648,SI_BD_14547,YL_CN_GBR_3409,YL_CN_GIH_2686,UW_VH_20988,YL_CN_PUR_4120,YL_CN_YRI_4390,YL_CN_PJL_3533,EM_DL_DEL10385609,YL_CN_ITU_3388;NS=2504;SAS_AF=0.7495;SVTYPE=DEL\tGT\t1|1\n16\t23528535\tDEL_pindel_43587\tGCCCAGCTAATTTTTTTCTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCTGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGC\tG\t.\tPASS\tAC=2946;AF=0.588259;AFR_AF=0.5991;AMR_AF=0.6513;AN=5008;CS=DEL_pindel;EAS_AF=0.5437;END=23528848;EUR_AF=0.5954;MEINFO=AluYa5,2,281,-;NS=2504;SAS_AF=0.5675;SITEPOST=0.9852;SVTYPE=DEL_ALU\tGT\t1|0\n16\t23865300\tALU_umary_ALU_11003\tT\t<INS:ME:ALU>\t.\t.\tAC=1795;AF=0.358427;AFR_AF=0.2141;AMR_AF=0.3127;AN=5008;CS=ALU_umary;EAS_AF=0.4712;EUR_AF=0.4423;MEINFO=AluYa5a2,1,281,-;NS=2504;SAS_AF=0.3834;SITEPOST=1;SVLEN=280;SVTYPE=ALU;TSD=GGTCAAGGCACTTCTT\tGT\t1|1\n16\t23910886\tDEL_pindel_43602\tAATTACTTTTGTTCATTTGTAATTACTTATCCATAAGAACTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGTGTGTGTGTGTGTGTGTGTGTGGTTTGTTGTCACCTGGGCTGGAGTGCAGTGATGCGACCATGGCTCACTATATTCAAAATCCTGGGCTCATGCGATCCTCCCACCTCAGCCTTCTGAGGAGCTGGGACCGTAGGCACGTGCCACCAGGCCCAGCAAATAAAATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTGTAG\tA\t.\tPASS\tAC=2764;AF=0.551917;AFR_AF=0.4629;AMR_AF=0.6729;AN=5008;CS=DEL_pindel;EAS_AF=0.5784;END=23911192;EUR_AF=0.6501;NS=2504;SAS_AF=0.4581;SITEPOST=0.9994;SVTYPE=DEL\tGT\t1|1\n16\t25340109\tBI_GS_DEL1_B1_P2446_269\tA\t<CN0>\t100\tPASS\tAC=3546;AF=0.708067;AFR_AF=0.8956;AMR_AF=0.6931;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.4762;END=25343128;EUR_AF=0.7137;MC=UW_VH_13338,UW_VH_5381,EM_DL_DEL35568,UW_VH_23106,YL_CN_FIN_3224,YL_CN_CHS_3566,SI_BD_14564,UW_VH_1110;NS=2504;SAS_AF=0.6984;SVTYPE=DEL\tGT\t0|1\n16\t26608023\tDEL_pindel_43672\tTCCTCTTCACATCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAAGACGGAGTCTCGCTCTGTCGCCCAGGCCGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTGTATTTTTTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC\tT\t.\tPASS\tAC=2800;AF=0.559105;AFR_AF=0.6044;AMR_AF=0.4654;AN=5008;CS=DEL_pindel;EAS_AF=0.6389;END=26608365;EUR_AF=0.5666;MEINFO=AluYb6_2,1,280,-;NS=2504;SAS_AF=0.4744;SITEPOST=0.9953;SVTYPE=DEL_ALU\tGT\t0|1\n16\t26963254\tDEL_pindel_43684\tAACCAAACAGAATGCTCCTTGGAAATGTCCCACTCGAGAGTGGGGAGGCTGGGGCATTTATCCACCACCTCACATCTGATGGTGGTTGAGGGTTTCCCCGGGGCTGTTAACTTCACTTCCTGGTTGCACCTGC\tA\t.\tPASS\tAC=1387;AF=0.276957;AFR_AF=0.0477;AMR_AF=0.4697;AN=5008;CS=DEL_pindel;EAS_AF=0.4851;END=26963386;EUR_AF=0.2853;NS=2504;SAS_AF=0.227;SITEPOST=0.9998;SVTYPE=DEL\tGT\t0|1\n16\t32328771\tDUP_gs_CNV_16_32328771_32370968\tA\t<CN0>,<CN2>,<CN3>,<CN4>,<CN5>\t.\tPASS\tAC=27,84,3220,20,26;AF=0.00539137,0.0167732,0.642971,0.00399361,0.00519169;AFR_AF=0.0015,0.0371,0.8374,0.003,0.003;AMR_AF=0.0101,0.0058,0.4063,0,0.0014;AN=5008;CS=DUP_gs;EAS_AF=0.0099,0.0188,0.5427,0.004,0.0089;END=32370968;EUR_AF=0.003,0.0089,0.5189,0.005,0.005;NS=2504;SAS_AF=0.0051,0.0031,0.7791,0.0072,0.0072;SITEPOST=0.9997;SVTYPE=CNV\tGT\t3|0\n16\t32366481\tDUP_gs_CNV_16_32366481_32410672\tC\t<CN0>,<CN2>,<CN3>,<CN4>\t.\tPASS\tAC=16,3134,109,8;AF=0.00319489,0.625799,0.0217652,0.00159744;AFR_AF=0,0.8033,0.0477,0.0008;AMR_AF=0.0058,0.3991,0.0043,0.0014;AN=5008;CS=DUP_gs;EAS_AF=0.0069,0.5317,0.0228,0.003;END=32410672;EUR_AF=0.002,0.5219,0.008,0.002;NS=2504;SAS_AF=0.0031,0.7505,0.0123,0.001;SITEPOST=0.9999;SVTYPE=CNV\tGT\t2|0\n16\t32418983\tDUP_gs_CNV_16_32418983_32469917\tA\t<CN0>,<CN2>,<CN3>,<CN4>\t.\tPASS\tAC=13,3159,55,6;AF=0.00259585,0.630791,0.0109824,0.00119808;AFR_AF=0.0008,0.8116,0.028,0.0008;AMR_AF=0.0043,0.402,0.0014,0.0014;AN=5008;CS=DUP_gs;EAS_AF=0.005,0.5446,0.006,0.002;END=32469917;EUR_AF=0.002,0.5129,0.005,0.001;NS=2504;SAS_AF=0.002,0.7587,0.0061,0.001;SITEPOST=0.9989;SVTYPE=CNV\tGT\t2|0\n16\t32600305\tBI_GS_DEL1_B5_P2453_168\tC\t<CN0>\t100\tPASS\tAC=945;AF=0.188698;AFR_AF=0.0265;AMR_AF=0.33;AN=5008;CIEND=-4,5;CIPOS=-4,5;CS=DEL_union;EAS_AF=0.1369;END=32601869;EUR_AF=0.3926;MC=YL_CN_TSI_3465;NS=2504;SAS_AF=0.1513;SVTYPE=DEL\tGT\t0|1\n16\t32611029\tDUP_gs_CNV_16_32611029_32642738\tA\t<CN0>,<CN2>,<CN3>,<CN4>\t.\tPASS\tAC=8,3124,126,9;AF=0.00159744,0.623802,0.0251597,0.00179712;AFR_AF=0,0.8086,0.0545,0.0008;AMR_AF=0.0029,0.3991,0.0029,0.0014;AN=5008;CS=DUP_gs;EAS_AF=0.003,0.5258,0.0248,0.004;END=32642738;EUR_AF=0.003,0.5149,0.0139,0.002;NS=2504;SAS_AF=0,0.7464,0.0133,0.001;SITEPOST=0.9999;SVTYPE=CNV\tGT\t2|0\n16\t32831659\tDUP_gs_CNV_16_32831659_32863935\tA\t<CN0>,<CN2>,<CN3>,<CN4>,<CN5>\t.\tPASS\tAC=38,3012,28,61,8;AF=0.00758786,0.601438,0.00559105,0.0121805,0.00159744;AFR_AF=0.0053,0.7799,0.0023,0.034,0.0008;AMR_AF=0.0101,0.3977,0.0014,0.0014,0;AN=5008;CS=DUP_gs;EAS_AF=0.0099,0.504,0.0099,0.0079,0.004;END=32863935;EUR_AF=0.006,0.494,0.003,0.004,0.002;NS=2504;SAS_AF=0.0082,0.7157,0.0112,0.0031,0.001;SITEPOST=0.9989;SVTYPE=CNV\tGT\t2|0\n16\t33446163\tDUP_gs_CNV_16_33446163_33480261\tC\t<CN0>,<CN2>,<CN3>,<CN4>\t.\tPASS\tAC=12,3153,82,14;AF=0.00239617,0.629593,0.0163738,0.00279553;AFR_AF=0.0008,0.8154,0.0356,0.0015;AMR_AF=0.0029,0.4063,0.0014,0.0014;AN=5008;CS=DUP_gs;EAS_AF=0.005,0.5456,0.0139,0.003;END=33480261;EUR_AF=0.002,0.5099,0.0099,0.003;NS=2504;SAS_AF=0.002,0.7464,0.0102,0.0051;SITEPOST=0.9998;SVTYPE=CNV\tGT\t2|0\n16\t33467709\tALU_umary_ALU_11021\tG\t<INS:ME:ALU>\t.\t.\tAC=105;AF=0.0209664;AFR_AF=0.0008;AMR_AF=0.0245;AN=5008;CS=ALU_umary;EAS_AF=0;EUR_AF=0.0795;MEINFO=AluUndef,17,281,+;NS=2504;SAS_AF=0.0072;SITEPOST=1;SVLEN=264;SVTYPE=ALU;TSD=AAAATGTAATTAACG\tGT\t1|0\n16\t33470755\tDUP_gs_CNV_16_33470755_33495606\tA\t<CN0>,<CN2>,<CN3>,<CN4>\t.\tPASS\tAC=12,3160,76,13;AF=0.00239617,0.63099,0.0151757,0.00259585;AFR_AF=0.0008,0.8139,0.0348,0.0008;AMR_AF=0.0043,0.4092,0.0014,0.0014;AN=5008;CS=DUP_gs;EAS_AF=0.004,0.5466,0.0119,0.003;END=33495606;EUR_AF=0.002,0.5109,0.0089,0.003;NS=2504;SAS_AF=0.002,0.7515,0.0082,0.0051;SITEPOST=0.9997;SVTYPE=CNV\tGT\t2|0\n16\t33484521\tDUP_gs_CNV_16_33484521_33543753\tA\t<CN0>,<CN2>,<CN3>,<CN4>\t.\tPASS\tAC=16,3155,83,10;AF=0.00319489,0.629992,0.0165735,0.00199681;AFR_AF=0.0015,0.8132,0.0378,0.0008;AMR_AF=0.0029,0.4049,0.0014,0.0014;AN=5008;CS=DUP_gs;EAS_AF=0.005,0.5456,0.0109,0.003;END=33543753;EUR_AF=0.004,0.5129,0.0089,0.004;NS=2504;SAS_AF=0.0031,0.7495,0.0123,0.001;SITEPOST=0.9999;SVTYPE=CNV\tGT\t2|0\n16\t33524565\tDUP_gs_CNV_16_33524565_33570784\tA\t<CN0>,<CN2>,<CN3>,<CN4>\t.\tPASS\tAC=15,3154,88,11;AF=0.00299521,0.629792,0.0175719,0.00219649;AFR_AF=0.0015,0.8185,0.0378,0.0015;AMR_AF=0.0058,0.4063,0.0014,0.0014;AN=5008;CS=DUP_gs;EAS_AF=0.004,0.5427,0.0129,0.003;END=33570784;EUR_AF=0.002,0.507,0.0109,0.004;NS=2504;SAS_AF=0.0031,0.7495,0.0133,0.001;SITEPOST=0.9999;SVTYPE=CNV\tGT\t2|0\n16\t33586835\tBI_GS_DEL1_B4_P2454_71\tT\t<CN0>\t100\tPASS\tAC=262;AF=0.0523163;AFR_AF=0.0023;AMR_AF=0.1427;AN=5008;CIEND=-38,38;CIPOS=-38,38;CS=DEL_union;EAS_AF=0.0843;END=33590310;EUR_AF=0.0606;NS=2504;SAS_AF=0.0143;SVTYPE=DEL\tGT\t1|0\n16\t33588532\tDUP_gs_CNV_16_33588532_33626594\tC\t<CN0>,<CN2>,<CN3>,<CN4>\t.\tPASS\tAC=11,3142,101,13;AF=0.00219649,0.627396,0.0201677,0.00259585;AFR_AF=0.0008,0.8215,0.0393,0.0015;AMR_AF=0.0029,0.402,0.0014,0.0014;AN=5008;CS=DUP_gs;EAS_AF=0.004,0.5417,0.0179,0.004;END=33626594;EUR_AF=0.001,0.507,0.0119,0.004;NS=2504;SAS_AF=0.0031,0.7372,0.0184,0.002;SITEPOST=0.9999;SVTYPE=CNV\tGT\t2|0\n16\t34457085\tDUP_gs_CNV_16_34457085_34712399\tA\t<CN0>,<CN2>\t.\tPASS\tAC=1,159;AF=0.00019968,0.0317492;AFR_AF=0,0.0008;AMR_AF=0.0014,0.0504;AN=5008;CS=DUP_gs;EAS_AF=0,0.002;END=34712399;EUR_AF=0,0.1004;NS=2504;SAS_AF=0,0.0204;SITEPOST=1;SVTYPE=CNV\tGT\t2|0\n16\t46979627\tDEL_pindel_43859\tCGACACAGGAGGATTGCTTGGACACAGGAGGATTGCTTGGACACAGGAGGATTGCTTG\tC\t.\tPASS\tAC=1407;AF=0.28095;AFR_AF=0.357;AMR_AF=0.3012;AN=5008;CS=DEL_pindel;EAS_AF=0.2698;END=46979684;EUR_AF=0.2386;NS=2504;SAS_AF=0.2188;SITEPOST=0.9972;SVTYPE=DEL\tGT\t1|0\n16\t48508916\tEM_DL_DEL39092\tT\t<CN0>\t100\tPASS\tAC=2750;AF=0.549121;AFR_AF=0.3427;AMR_AF=0.572;AN=5008;CIEND=-150,150;CIPOS=-150,150;CS=DEL_union;EAS_AF=0.8393;END=48511376;EUR_AF=0.4543;MC=SI_BD_14648,YL_CN_CLM_3075,YL_CN_FIN_3295,YL_CN_CHB_3549,BI_GS_DEL1_B1_P2469_468,UW_VH_1115;NS=2504;SAS_AF=0.6104;SVTYPE=DEL\tGT\t1|0\n16\t48816867\tDEL_pindel_43895\tTTATTGTTGAGTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCTTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC\tT\t.\tPASS\tAC=1560;AF=0.311502;AFR_AF=0.4418;AMR_AF=0.3847;AN=5008;CS=DEL_pindel;EAS_AF=0.2093;END=48817185;EUR_AF=0.2068;MEINFO=AluYa5,1,281,-;NS=2504;SAS_AF=0.2965;SITEPOST=0.9995;SVTYPE=DEL_ALU\tGT\t1|0\n16\t49036072\tDEL_pindel_43904\tTAGAAAGATAGGCCTCACCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA\tT\t.\tPASS\tAC=3420;AF=0.682907;AFR_AF=0.6452;AMR_AF=0.683;AN=5008;CS=DEL_pindel;EAS_AF=0.6706;END=49036207;EUR_AF=0.7316;MEINFO=AluYa8,204,282,+;NS=2504;SAS_AF=0.6963;SITEPOST=0.98095;SVTYPE=DEL_ALU\tGT\t1|1\n16\t49979396\tDEL_pindel_43922\tGAAATCTGTGCTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGAGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC\tG\t.\tPASS\tAC=2305;AF=0.460264;AFR_AF=0.6331;AMR_AF=0.4078;AN=5008;CS=DEL_pindel;EAS_AF=0.4563;END=49979710;EUR_AF=0.3797;MEINFO=AluYa5,1,281,-;NS=2504;SAS_AF=0.3507;SITEPOST=0.9942;SVTYPE=DEL_ALU\tGT\t1|0\n16\t52032355\tUW_VH_1892\tT\t<CN0>\t100\tPASS\tAC=4;AF=0.00079872;AFR_AF=0;AMR_AF=0;AN=5008;CIEND=0,112;CIPOS=-95,0;CS=DEL_union;EAS_AF=0;END=52033598;EUR_AF=0.004;MC=BI_GS_DEL1_B1_P2473_48;NS=2504;SAS_AF=0;SVTYPE=DEL\tGT\t1|0\n16\t52904248\tDEL_pindel_43981\tGTGGTGCACGACTGTAGTCCCAGCTACTTGGGAGGCTGAGACAGAAGAATTGCTTAAACCTAGGAGGTGGAGGTTGCAGTGAGCCAAGATGGTGCCGCTGCACTCCAGCCTCGGTGACAGAGTGAC\tG\t.\tPASS\tAC=2112;AF=0.421725;AFR_AF=0.2708;AMR_AF=0.5;AN=5008;CS=DEL_pindel;EAS_AF=0.5724;END=52904373;EUR_AF=0.4384;NS=2504;SAS_AF=0.3978;SITEPOST=0.9998;SVTYPE=DEL\tGT\t1|1\n16\t53091851\tDUP_gs_CNV_16_53091851_53095128\tT\t<CN0>,<CN2>\t.\tPASS\tAC=4,3;AF=0.00079872,0.00059904;AFR_AF=0,0;AMR_AF=0,0;AN=5008;CS=DUP_gs;EAS_AF=0,0.001;END=53095128;EUR_AF=0,0.002;NS=2504;SAS_AF=0.0041,0;SITEPOST=0.99745;SVTYPE=CNV\tGT\t0|2\n16\t53874981\tALU_umary_ALU_11050\tG\t<INS:ME:ALU>\t.\t.\tAC=2109;AF=0.421126;AFR_AF=0.4365;AMR_AF=0.379;AN=5008;CS=ALU_umary;EAS_AF=0.4157;EUR_AF=0.3757;MEINFO=AluYb8,1,270,+;NS=2504;SAS_AF=0.4826;SITEPOST=1;SVLEN=269;SVTYPE=ALU;TSD=AATAAGAAGTGCCTG\tGT\t0|1\n16\t54660356\tDEL_pindel_44010\tTAAAAATTAGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCTGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTGGTAGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGCAGGAGGAGCTTGCAGTGAGCCGAGATCGCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAA\tT\t.\tPASS\tAC=1492;AF=0.297923;AFR_AF=0.4274;AMR_AF=0.2464;AN=5008;CS=DEL_pindel;EAS_AF=0.3482;END=54660665;EUR_AF=0.173;MEINFO=AluYc1,1,281,+;NS=2504;SAS_AF=0.2362;SITEPOST=0.9961;SVTYPE=DEL_ALU\tGT\t1|0\n16\t55798890\tDUP_gs_CNV_16_55798890_55822423\tA\t<CN0>,<CN2>\t.\tPASS\tAC=1001,7;AF=0.19988,0.00139776;AFR_AF=0.0272,0.003;AMR_AF=0.2248,0;AN=5008;CS=DUP_gs;EAS_AF=0.4117,0.001;END=55822423;EUR_AF=0.1352,0;NS=2504;SAS_AF=0.2638,0.002;SITEPOST=1;SVTYPE=CNV\tGT\t1|0\n16\t55832207\tDUP_gs_CNV_16_55832207_55864521\tA\t<CN0>,<CN2>,<CN3>\t.\tPASS\tAC=7,1005,1;AF=0.00139776,0.200679,0.00019968;AFR_AF=0.0038,0.0287,0;AMR_AF=0,0.2262,0;AN=5008;CS=DUP_gs;EAS_AF=0.001,0.4127,0.001;END=55864521;EUR_AF=0,0.1362,0;NS=2504;SAS_AF=0.001,0.2628,0;SITEPOST=1;SVTYPE=CNV\tGT\t2|0\n16\t58647190\tEM_DL_DEL39322\tG\t<CN0>\t100\tPASS\tAC=1154;AF=0.230431;AFR_AF=0.1967;AMR_AF=0.2882;AN=5008;CIEND=-150,150;CIPOS=-150,150;CS=DEL_union;EAS_AF=0.0456;END=58650264;EUR_AF=0.4374;MC=YL_CN_CDX_3051,BI_GS_DEL1_B1_P2479_521,UW_VH_1118;NS=2504;SAS_AF=0.2127;SVTYPE=DEL\tGT\t1|0\n16\t58673838\tBI_GS_DEL1_B4_P2479_129\tA\t<CN0>\t100\tPASS\tAC=1030;AF=0.205671;AFR_AF=0.1127;AMR_AF=0.3127;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.1855;END=58677346;EUR_AF=0.1561;MC=UW_VH_11569,YL_CN_JPT_3753,UW_VH_1603,UW_VH_22750,UW_VH_22029,SI_BD_14681,EM_DL_DEL39331,UW_VH_19336;NS=2504;SAS_AF=0.3272;SVTYPE=DEL\tGT\t0|1\n16\t58819558\tDEL_pindel_44085\tAGCCAGGTGCAGGATATAATCTCCTGGTGTGCTGTTTGCTGAGACCCTTGGAAGAGCGCAGTATTACAGTGAGAGT\tA\t.\tPASS\tAC=1472;AF=0.29393;AFR_AF=0.1362;AMR_AF=0.3429;AN=5008;CS=DEL_pindel;EAS_AF=0.1954;END=58819633;EUR_AF=0.495;NS=2504;SAS_AF=0.3671;SITEPOST=0.9997;SVTYPE=DEL\tGT\t0|1\n16\t60032082\tDEL_pindel_44124\tTGGGAAGATTCTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGCGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCACCCGCTACCACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCACCCGGCCC\tT\t.\tPASS\tAC=2967;AF=0.592452;AFR_AF=0.5908;AMR_AF=0.6643;AN=5008;CS=DEL_pindel;EAS_AF=0.5169;END=60032396;EUR_AF=0.6272;MEINFO=AluYc1,1,281,-;NS=2504;SAS_AF=0.5859;SITEPOST=0.9889;SVTYPE=DEL_ALU\tGT\t0|1\n16\t61092204\tALU_umary_ALU_11073\tT\t<INS:ME:ALU>\t.\t.\tAC=1123;AF=0.224241;AFR_AF=0.1498;AMR_AF=0.2896;AN=5008;CS=ALU_umary;EAS_AF=0.3284;EUR_AF=0.2296;MEINFO=AluYb7_4,5,279,-;NS=2504;SAS_AF=0.1656;SITEPOST=1;SVLEN=274;SVTYPE=ALU;TSD=CCTACAACTATCTT\tGT\t1|0\n16\t63442423\tDEL_pindel_44210\tGCTGAAAAATAAACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGCGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCGCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGC\tG\t.\tPASS\tAC=2663;AF=0.531749;AFR_AF=0.5893;AMR_AF=0.4914;AN=5008;CS=DEL_pindel;EAS_AF=0.6171;END=63442753;EUR_AF=0.5;MEINFO=AluYa4_5,2,281,-;NS=2504;SAS_AF=0.4274;SITEPOST=0.9931;SVTYPE=DEL_ALU\tGT\t1|0\n16\t63756306\tDEL_pindel_44218\tGATTGCTGGGTCAAATGATATTTCTGCTTCTAGATCCTTGAGGAATCACCGTACTGTCTTCCACAATGGTTGAACGAATTTAC\tG\t.\tPASS\tAC=1357;AF=0.270966;AFR_AF=0.1067;AMR_AF=0.3199;AN=5008;CS=DEL_pindel;EAS_AF=0.2698;END=63756388;EUR_AF=0.3767;NS=2504;SAS_AF=0.3507;SITEPOST=1;SVTYPE=DEL\tGT\t1|0\n16\t70181849\tDUP_gs_CNV_16_70181849_70196732\tT\t<CN0>,<CN2>,<CN3>,<CN4>,<CN5>\t.\tPASS\tAC=7,2200,76,109,14;AF=0.00139776,0.439297,0.0151757,0.0217652,0.00279553;AFR_AF=0.0008,0.5045,0.0076,0.0227,0.003;AMR_AF=0.0058,0.3919,0.0086,0.013,0;AN=5008;CS=DUP_gs;EAS_AF=0.001,0.3065,0.0109,0.0129,0.006;END=70196732;EUR_AF=0,0.5368,0.0229,0.0338,0.003;NS=2504;SAS_AF=0.001,0.4213,0.0266,0.0235,0.001;SITEPOST=0.9992;SVTYPE=CNV\tGT\t2|2\n16\t70553009\tDEL_pindel_44337\tTAGGATTTGCATTTCTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTTGCCCAGGCCAGACTGCGGACTGCAGTGGCGCAATCTCGGCTCATTGCAAGCTCCGCTTCCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC\tT\t.\tPASS\tAC=2598;AF=0.51877;AFR_AF=0.6747;AMR_AF=0.4222;AN=5008;CS=DEL_pindel;EAS_AF=0.4812;END=70553329;EUR_AF=0.3767;MEINFO=AluYb,1,281,-;NS=2504;SAS_AF=0.5613;SITEPOST=0.9902;SVTYPE=DEL_ALU\tGT\t1|0\n16\t71866702\tDUP_gs_CNV_16_71866702_71869740\tC\t<CN0>,<CN2>\t.\tPASS\tAC=4,6;AF=0.00079872,0.00119808;AFR_AF=0,0.0015;AMR_AF=0.0043,0;AN=5008;CS=DUP_gs;EAS_AF=0,0;END=71869740;EUR_AF=0.001,0.003;NS=2504;SAS_AF=0,0.001;SITEPOST=0.9335;SVTYPE=CNV\tGT\t0|2\n16\t72753292\tDEL_pindel_44358\tCATAGATTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCATGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCCT\tC\t.\tPASS\tAC=3989;AF=0.796526;AFR_AF=0.8419;AMR_AF=0.6729;AN=5008;CS=DEL_pindel;EAS_AF=0.6875;END=72753597;EUR_AF=0.8658;MEINFO=AluYa5,1,281,-;NS=2504;SAS_AF=0.864;SITEPOST=0.9888;SVTYPE=DEL_ALU\tGT\t0|1\n16\t74393945\tDUP_gs_CNV_16_74393945_74434300\tG\t<CN2>,<CN3>,<CN4>\t.\tPASS\tAC=2130,182,69;AF=0.425319,0.0363418,0.013778;AFR_AF=0.4977,0.0356,0.0091;AMR_AF=0.3775,0.0159,0.0086;AN=5008;CS=DUP_gs;EAS_AF=0.2708,0.0327,0.0079;END=74434300;EUR_AF=0.5189,0.0497,0.0348;NS=2504;SAS_AF=0.4243,0.0419,0.0082;SITEPOST=0.9989;SVTYPE=CNV\tGT\t1|1\n16\t75429831\tEM_DL_DEL10401922\tG\t<CN0>\t100\tPASS\tAC=2487;AF=0.496605;AFR_AF=0.3101;AMR_AF=0.6744;AN=5008;CIEND=-150,150;CIPOS=-150,150;CS=DEL_union;EAS_AF=0.5456;END=75430673;EUR_AF=0.5716;MC=SI_BD_14786;NS=2504;SAS_AF=0.4949;SVTYPE=DEL\tGT\t1|1\n16\t76539138\tUW_VH_1123\tA\t<CN0>\t100\tPASS\tAC=2622;AF=0.523562;AFR_AF=0.1051;AMR_AF=0.5231;AN=5008;CIEND=0,526;CIPOS=-529,0;CS=DEL_union;EAS_AF=0.7728;END=76544021;EUR_AF=0.7237;MC=YL_CN_ACB_4011,EM_DL_DEL39908,UW_VH_11990,BI_GS_DEL1_B1_P2497_463,SI_BD_14795,UW_VH_5815;NS=2504;SAS_AF=0.6268;SVTYPE=DEL\tGT\t1|1\n16\t77090638\tBI_GS_DEL1_B1_P2498_91\tT\t<CN0>\t100\tPASS\tAC=735;AF=0.146765;AFR_AF=0.0545;AMR_AF=0.1643;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.0992;END=77092862;EUR_AF=0.2276;MC=EM_DL_DEL39924,SI_BD_14802,YL_CN_JPT_3790,UW_VH_1605;NS=2504;SAS_AF=0.2249;SVTYPE=DEL\tGT\t1|0\n16\t78371604\tUW_VH_21280\tA\t<CN0>\t100\tPASS\tAC=1380;AF=0.275559;AFR_AF=0.3011;AMR_AF=0.3343;AN=5008;CIEND=0,417;CIPOS=-276,0;CS=DEL_union;EAS_AF=0.0129;END=78384909;EUR_AF=0.4771;MC=YL_CN_PUR_4266,UW_VH_2164,UW_VH_11095,BI_GS_DEL1_B2_P2499_303,EM_DL_DEL39950;NS=2504;SAS_AF=0.2628;SVTYPE=DEL\tGT\t1|0\n16\t78757451\tDEL_pindel_44497\tCTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTT\tC\t.\tPASS\tAC=1500;AF=0.299521;AFR_AF=0.3525;AMR_AF=0.2997;AN=5008;CS=DEL_pindel;EAS_AF=0.253;END=78757506;EUR_AF=0.3072;NS=2504;SAS_AF=0.2679;SITEPOST=0.9984;SVTYPE=DEL\tGT\t0|1\n16\t78876665\tBI_GS_DEL1_B4_P2499_184\tT\t<CN0>\t100\tPASS\tAC=282;AF=0.0563099;AFR_AF=0.0061;AMR_AF=0.0692;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.0456;END=78877564;EUR_AF=0.0885;MC=UW_VH_2768,UW_VH_5293;NS=2504;SAS_AF=0.093;SVTYPE=DEL\tGT\t0|1\n16\t80196900\tDEL_pindel_44536\tTGATAGCAGTTGACTTAAAGAGGAGAATGAAAGAAATTAGAAAAGAGAAAAACCAGCCAATGGTAAAGTGGTTCCTATGCTATTTAAAATAATATTAAATAAA\tT\t.\tPASS\tAC=1623;AF=0.324081;AFR_AF=0.32;AMR_AF=0.2334;AN=5008;CS=DEL_pindel;EAS_AF=0.3234;END=80197002;EUR_AF=0.4245;NS=2504;SAS_AF=0.2914;SITEPOST=0.9999;SVTYPE=DEL\tGT\t0|1\n16\t81619267\tDEL_pindel_44557\tACACCGCATGGCACAGTACCTTTTGGCCAGTCCACTTCCCTGGACCTTAGAAATTCCTTTGCATCTGCTGGAGGATTGGGCTGGAGAAGAACCC\tA\t.\tPASS\tAC=323;AF=0.0644968;AFR_AF=0.0272;AMR_AF=0.0778;AN=5008;CS=DEL_pindel;EAS_AF=0.0942;END=81619360;EUR_AF=0.0805;NS=2504;SAS_AF=0.0583;SITEPOST=0.9995;SVTYPE=DEL\tGT\t0|1\n16\t82164197\tBI_GS_DEL1_B3_P2503_8\tA\t<CN0>\t100\tPASS\tAC=3802;AF=0.759185;AFR_AF=0.9448;AMR_AF=0.5793;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.5506;END=82164444;EUR_AF=0.834;NS=2504;SAS_AF=0.774;SVTYPE=DEL\tGT\t1|1\n16\t82164690\tALU_umary_ALU_11151\tG\t<INS:ME:ALU>\t.\t.\tAC=2517;AF=0.502596;AFR_AF=0.6188;AMR_AF=0.3804;AN=5008;CS=ALU_umary;EAS_AF=0.3522;EUR_AF=0.5636;MEINFO=AluUndef,12,281,-;NS=2504;SAS_AF=0.5245;SITEPOST=1;SVLEN=269;SVTYPE=ALU;TSD=AAGAATGGACATATG\tGT\t1|0\n16\t84501432\tUW_VH_15670\tG\t<CN0>\t100\tPASS\tAC=1154;AF=0.230431;AFR_AF=0.3775;AMR_AF=0.2147;AN=5008;CIEND=0,393;CIPOS=-381,0;CS=DEL_union;EAS_AF=0.0794;END=84504122;EUR_AF=0.2117;MC=EM_DL_DEL40074,UW_VH_2628,UW_VH_16720,YL_CN_GBR_3546,YL_CN_GWD_4855,YL_CN_ITU_3532,BI_GS_DEL1_B1_P2505_436,UW_VH_4499;NS=2504;SAS_AF=0.2178;SVTYPE=DEL\tGT\t1|0\n16\t85149501\tUW_VH_55\tC\t<CN0>\t100\tPASS\tAC=2576;AF=0.514377;AFR_AF=0.6687;AMR_AF=0.6455;AN=5008;CIEND=0,600;CIPOS=-576,0;CS=DEL_union;EAS_AF=0.2738;END=85150074;EUR_AF=0.6024;MC=BI_GS_DEL1_B3_P2506_8,UW_VH_9258,SI_BD_14879;NS=2504;SAS_AF=0.3701;SVTYPE=DEL\tGT\t1|1\n16\t85188639\tINV_delly_INV00040664\tC\t<INV>\t.\tPASS\tAC=2745;AF=0.548123;AFR_AF=0.4735;AMR_AF=0.5937;AN=5008;CIEND=-223,223;CIPOS=-223,223;CS=INV_delly;EAS_AF=0.5665;END=85189823;EUR_AF=0.6282;IMPRECISE;NS=2504;SAS_AF=0.5153;SITEPOST=1;SVTYPE=INV\tGT\t1|1\n16\t86284308\tDEL_pindel_44702\tACTCCTGAATTCTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGTGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCTACCACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTGTTAGCCAGAATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGC\tA\t.\tPASS\tAC=3278;AF=0.654553;AFR_AF=0.6256;AMR_AF=0.6268;AN=5008;CS=DEL_pindel;EAS_AF=0.7262;END=86284616;EUR_AF=0.6889;MEINFO=AluYc1,2,281,-;NS=2504;SAS_AF=0.6043;SITEPOST=0.9948;SVTYPE=DEL_ALU\tGT\t1|1\n16\t87981799\tDEL_pindel_44757\tCAGGCTCAGCGTTCCAGCATTCCACTCGGCCTCCTGGGCTTTTCCTGGGCCACCG\tC\t.\tPASS\tAC=2388;AF=0.476837;AFR_AF=0.5756;AMR_AF=0.4856;AN=5008;CS=DEL_pindel;EAS_AF=0.245;END=87981853;EUR_AF=0.6074;NS=2504;SAS_AF=0.4417;SITEPOST=0.9999;SVTYPE=DEL\tGT\t1|0\n16\t88112672\tBI_GS_DEL1_B5_P2509_98\tG\t<CN0>\t100\tPASS\tAC=1428;AF=0.285144;AFR_AF=0.1762;AMR_AF=0.4006;AN=5008;CIEND=-5,5;CIPOS=-5,5;CS=DEL_union;EAS_AF=0.4474;END=88115662;EUR_AF=0.2227;MC=SI_BD_14912,YL_CN_MSL_3316,UW_VH_1607,EM_DL_DEL40158;NS=2504;SAS_AF=0.2474;SVTYPE=DEL\tGT\t0|1\n16\t88862644\tBI_GS_DEL1_B1_P2509_470\tA\t<CN0>\t100\tPASS\tAC=1302;AF=0.259984;AFR_AF=0.0318;AMR_AF=0.2421;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.5665;END=88863596;EUR_AF=0.2425;MC=YL_CN_PEL_3266;NS=2504;SAS_AF=0.2832;SVTYPE=DEL\tGT\t1|0\n16\t89291389\tALU_umary_ALU_11172\tG\t<INS:ME:ALU>\t.\t.\tAC=1818;AF=0.363019;AFR_AF=0.2678;AMR_AF=0.4294;AN=5008;CS=ALU_umary;EAS_AF=0.3819;EUR_AF=0.4274;MEINFO=AluYa4_2,1,281,+;NS=2504;SAS_AF=0.3589;SITEPOST=1;SVLEN=280;SVTYPE=ALU;TSD=AAGATGCATTCTGG\tGT\t0|1\n16\t89896054\tUW_VH_13891\tA\t<CN0>\t100\tPASS\tAC=87;AF=0.0173722;AFR_AF=0.003;AMR_AF=0.0144;AN=5008;CIEND=0,330;CIPOS=-343,0;CS=DEL_union;EAS_AF=0;END=89898405;EUR_AF=0.0706;MC=YL_CN_CEU_4473,SI_BD_14946,BI_GS_DEL1_B1_P2510_572,UW_VH_1898,EM_DL_DEL40196;NS=2504;SAS_AF=0.002;SVTYPE=DEL\tGT\t0|1\n17\t185812\tDEL_pindel_44850\tCAGGGCGACAGGGAGGAGATGGGGTTTAGAGGAGGGAAAAGAAGCTGGGACAAACATAAAAGA\tC\t.\tPASS\tAC=3708;AF=0.740415;AFR_AF=0.5734;AMR_AF=0.8055;AN=5008;CS=DEL_pindel;EAS_AF=0.7996;END=185874;EUR_AF=0.8012;NS=2504;SAS_AF=0.7965;SITEPOST=0.9994;SVTYPE=DEL\tGT\t1|1\n17\t548982\tUW_VH_4724\tC\t<CN0>\t100\tPASS\tAC=976;AF=0.194888;AFR_AF=0.0908;AMR_AF=0.353;AN=5008;CIEND=0,490;CIPOS=-290,0;CS=DEL_union;EAS_AF=0.2143;END=550033;EUR_AF=0.1988;MC=BI_GS_DEL1_B1_P2512_303;NS=2504;SAS_AF=0.1994;SVTYPE=DEL\tGT\t0|1\n17\t723720\tBI_GS_DEL1_B1_P2512_435\tT\t<CN0>\t100\tPASS\tAC=3369;AF=0.672724;AFR_AF=0.8404;AMR_AF=0.5951;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.6687;END=724862;EUR_AF=0.5825;MC=YL_CN_PUR_4305,SI_BD_14995,UW_VH_14516,YL_CN_GBR_3565,YL_CN_STU_3590,YL_CN_ESN_3637,YL_CN_ITU_3550,YL_CN_PEL_3278,YL_CN_GWD_4879,YL_CN_TSI_3569,YL_CN_LWK_3442,YL_CN_CEU_4484,YL_CN_PJL_3709,UW_VH_18155,YL_CN_IBS_3271,UW_VH_22776,YL_CN_YRI_4547,UW_VH_4528,YL_CN_MSL_3323,YL_CN_JPT_3816;NS=2504;SAS_AF=0.5982;SVTYPE=DEL\tGT\t0|1\n17\t1097737\tBI_GS_DEL1_B1_P2513_48\tT\t<CN0>\t100\tPASS\tAC=1973;AF=0.39397;AFR_AF=0.1831;AMR_AF=0.5231;AN=5008;CIEND=0,1;CIPOS=0,1;CS=DEL_union;EAS_AF=0.6419;END=1098192;EUR_AF=0.3598;MC=UW_VH_2629;NS=2504;SAS_AF=0.3671;SVTYPE=DEL\tGT\t1|1\n17\t1146295\tBI_GS_DEL1_B1_P2513_74\tC\t<CN0>\t100\tPASS\tAC=1201;AF=0.239816;AFR_AF=0.3782;AMR_AF=0.1931;AN=5008;CIEND=-4,5;CIPOS=-4,5;CS=DEL_union;EAS_AF=0.1617;END=1147646;EUR_AF=0.2376;MC=EM_DL_DEL10411587,YL_CN_ACB_4048,UW_VH_3706;NS=2504;SAS_AF=0.1687;SVTYPE=DEL\tGT\t1|0\n17\t1602167\tBI_GS_DEL1_B3_P2513_25\tC\t<CN0>\t100\tPASS\tAC=721;AF=0.14397;AFR_AF=0.1415;AMR_AF=0.2003;AN=5008;CIEND=-1,1;CIPOS=-1,1;CS=DEL_union;EAS_AF=0.2133;END=1602943;EUR_AF=0.0547;NS=2504;SAS_AF=0.1278;SVTYPE=DEL\tGT\t0|1\n17\t1654675\tBI_GS_DEL1_B4_P2513_123\tA\t<CN0>\t100\tPASS\tAC=1192;AF=0.238019;AFR_AF=0.031;AMR_AF=0.2118;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.4812;END=1655405;EUR_AF=0.2823;MC=UW_VH_2131;NS=2504;SAS_AF=0.2403;SVTYPE=DEL\tGT\t0|1\n17\t1912668\tBI_GS_DEL1_B2_P2513_505\tC\t<CN0>\t100\tPASS\tAC=2122;AF=0.423722;AFR_AF=0.3949;AMR_AF=0.4063;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.5367;END=1913537;EUR_AF=0.3151;MC=SI_BD_15030,UW_VH_1129,EM_DL_DEL10412036;NS=2504;SAS_AF=0.4703;SVTYPE=DEL\tGT\t0|1\n17\t2719916\tUW_VH_25192\tT\t<CN0>\t100\tPASS\tAC=1608;AF=0.321086;AFR_AF=0.233;AMR_AF=0.3026;AN=5008;CIEND=0,467;CIPOS=-280,0;CS=DEL_union;EAS_AF=0.3304;END=2721218;EUR_AF=0.4712;MC=UW_VH_1130,YL_CN_CEU_4497,BI_GS_DEL1_B5_P2514_640,YL_CN_ESN_3645,YL_CN_CDX_3105,EM_DL_DEL10412503,YL_CN_GIH_2799,YL_CN_PUR_4323,YL_CN_ASW_3657;NS=2504;SAS_AF=0.2894;SVTYPE=DEL\tGT\t1|0\n17\t3734770\tBI_GS_DEL1_B5_P2515_664\tG\t<CN0>\t100\tPASS\tAC=1941;AF=0.38758;AFR_AF=0.0794;AMR_AF=0.353;AN=5008;CIEND=-6,7;CIPOS=-6,7;CS=DEL_union;EAS_AF=0.6032;END=3735834;EUR_AF=0.508;MC=UW_VH_1131,YL_CN_CHS_3749,SI_BD_15060,YL_CN_GIH_2801,YL_CN_GBR_3577,YL_CN_STU_3603;NS=2504;SAS_AF=0.4826;SVTYPE=DEL\tGT\t0|1\n17\t5464738\tDEL_pindel_45020\tGCCATGTGGTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCCGGACTGCGGACTGCAGTGGCGCAATCTCAGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC\tG\t.\tPASS\tAC=1920;AF=0.383387;AFR_AF=0.3986;AMR_AF=0.3963;AN=5008;CS=DEL_pindel;EAS_AF=0.2708;END=5465062;EUR_AF=0.4364;MEINFO=AluYb6_2,1,281,-;NS=2504;SAS_AF=0.4151;SITEPOST=0.9999;SVTYPE=DEL_ALU\tGT\t0|1\n17\t6874732\tDEL_pindel_45054\tATTCAGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCTCGCTAACACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGAGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCAGGAGGCGGAGCCTGCAGTGAGCCGGGATTGCGCCACTGCACTCCAGCCTGGGCGACAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAGG\tA\t.\tPASS\tAC=1815;AF=0.36242;AFR_AF=0.4319;AMR_AF=0.4798;AN=5008;CS=DEL_pindel;EAS_AF=0.2688;END=6875034;EUR_AF=0.3221;MEINFO=AluYe,1,281,+;NS=2504;SAS_AF=0.3231;SITEPOST=0.9998;SVTYPE=DEL_ALU\tGT\t1|0\n17\t7755714\tDEL_pindel_45086\tGCTGGGGCTTGGAGAGCCGCCAGCAGTGAGGGAAGGGGCTTGGGCCTAGGTGT\tG\t.\tPASS\tAC=476;AF=0.0950479;AFR_AF=0.0083;AMR_AF=0.1398;AN=5008;CS=DEL_pindel;EAS_AF=0.1409;END=7755766;EUR_AF=0.1024;NS=2504;SAS_AF=0.1258;SITEPOST=1;SVTYPE=DEL\tGT\t1|1\n17\t10006454\tBI_GS_DEL1_B1_P2522_4\tG\t<CN0>\t100\tPASS\tAC=9;AF=0.00179712;AFR_AF=0.0008;AMR_AF=0.0014;AN=5008;CIEND=-8,8;CIPOS=-8,8;CS=DEL_union;EAS_AF=0;END=10006923;EUR_AF=0.005;NS=2504;SAS_AF=0.002;SVTYPE=DEL\tGT\t0|1\n17\t10203420\tDEL_pindel_45151\tCAAGATCCTGATTCAGGCCAGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGCGGTGGCGGGCGCCTGTAGTCCCAGCTCCTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCCGACCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA\tC\t.\tPASS\tAC=2392;AF=0.477636;AFR_AF=0.5219;AMR_AF=0.5403;AN=5008;CS=DEL_pindel;EAS_AF=0.3641;END=10203771;EUR_AF=0.5805;MEINFO=AluYb6_2,1,281,+;NS=2504;SAS_AF=0.3845;SITEPOST=0.9953;SVTYPE=DEL_ALU\tGT\t0|1\n17\t11430197\tDEL_pindel_45188\tCATATATATATATATATATATATATATATATATATATATATATATATATAT\tC\t.\tPASS\tAC=3633;AF=0.725439;AFR_AF=0.7315;AMR_AF=0.7435;AN=5008;CS=DEL_pindel;EAS_AF=0.756;END=11430247;EUR_AF=0.6809;NS=2504;SAS_AF=0.7188;SITEPOST=0.91285;SVTYPE=DEL\tGT\t0|1\n17\t11557370\tDEL_pindel_45193\tTAAAAGTTTAAAATCGATCTAGGCCGGGCGCGGTGGCTCACGCTTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAAATTAGCCGGGCGTGATGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCACTCCAGCCTGGGCCACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAA\tT\t.\tPASS\tAC=1240;AF=0.247604;AFR_AF=0.2723;AMR_AF=0.1988;AN=5008;CS=DEL_pindel;EAS_AF=0.1885;END=11557691;EUR_AF=0.2833;MEINFO=AluYi,1,281,+;NS=2504;SAS_AF=0.273;SITEPOST=0.9997;SVTYPE=DEL_ALU\tGT\t0|1\n17\t12196579\tDEL_pindel_45199\tTAAACATACTTTTGGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAACAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCGGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAACAAAAAAAAA\tT\t.\tPASS\tAC=3636;AF=0.726038;AFR_AF=0.5908;AMR_AF=0.7421;AN=5008;CS=DEL_pindel;EAS_AF=0.7817;END=12196896;EUR_AF=0.7753;MEINFO=AluYa5,1,281,+;NS=2504;SAS_AF=0.7894;SITEPOST=0.9738;SVTYPE=DEL_ALU\tGT\t1|1\n17\t13220477\tDEL_pindel_45214\tAAAGGGTAAAGACAGAATCTTTTTTTCTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGCGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC\tA\t.\tPASS\tAC=2425;AF=0.484225;AFR_AF=0.503;AMR_AF=0.5231;AN=5008;CS=DEL_pindel;EAS_AF=0.4286;END=13220804;EUR_AF=0.5099;MEINFO=AluYa4_5,1,281,-;NS=2504;SAS_AF=0.4622;SITEPOST=0.9995;SVTYPE=DEL_ALU\tGT\t1|0\n17\t13531701\tBI_GS_DEL1_B3_P2525_26\tG\t<CN0>\t100\tPASS\tAC=754;AF=0.150559;AFR_AF=0.2663;AMR_AF=0.1124;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.0665;END=13532712;EUR_AF=0.1451;MC=UW_VH_2262,UW_VH_21330,UW_VH_13812;NS=2504;SAS_AF=0.1135;SVTYPE=DEL\tGT\t0|1\n17\t14189910\tBI_GS_DEL1_B2_P2526_123\tT\t<CN0>\t100\tPASS\tAC=3118;AF=0.622604;AFR_AF=0.5053;AMR_AF=0.7522;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.6677;END=14191557;EUR_AF=0.7505;MC=YL_CN_GBR_3588,YL_CN_ACB_4073,YL_CN_STU_3621,UW_VH_1139,YL_CN_MXL_3024,YL_CN_IBS_3293,SI_BD_15143,YL_CN_PUR_4357,YL_CN_PEL_3324,YL_CN_JPT_3844,EM_DL_DEL10417902,YL_CN_KHV_3801;NS=2504;SAS_AF=0.5112;SVTYPE=DEL\tGT\t1|1\n17\t15863568\tDEL_pindel_45260\tTAAAAAAAGGCACAAATTGGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTGGTAGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCGCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAA\tT\t.\tPASS\tAC=2570;AF=0.513179;AFR_AF=0.4811;AMR_AF=0.5231;AN=5008;CS=DEL_pindel;EAS_AF=0.5218;END=15863886;EUR_AF=0.5268;MEINFO=AluYc1,1,281,+;NS=2504;SAS_AF=0.5266;SITEPOST=0.9998;SVTYPE=DEL_ALU\tGT\t1|0\n17\t16534216\tSVA_umary_SVA_689\tC\t<INS:ME:SVA>\t.\t.\tAC=96;AF=0.0191693;AFR_AF=0.0091;AMR_AF=0.0202;AN=5008;CS=SVA_umary;EAS_AF=0;EUR_AF=0.0596;MEINFO=SVA,684,1618,+;NS=2504;SAS_AF=0.0102;SITEPOST=1;SVLEN=934;SVTYPE=SVA;TSD=AAAAAATCTTTCTC\tGT\t1|0\n17\t16661446\tDUP_gs_CNV_17_16661446_16704453\tA\t<CN0>,<CN2>\t.\tPASS\tAC=0,1226;AF=0,0.244808;AFR_AF=0,0.1657;AMR_AF=0,0.3271;AN=5008;CS=DUP_gs;EAS_AF=0,0.0427;END=16704453;EUR_AF=0,0.4523;NS=2504;SAS_AF=0,0.2883;SITEPOST=1;SVTYPE=DUP\tGT\t0|2\n17\t16711552\tDUP_gs_CNV_17_16711552_16724682\tC\t<CN0>,<CN2>\t.\tPASS\tAC=1136,1065;AF=0.226837,0.21266;AFR_AF=0.3759,0.1241;AMR_AF=0.1268,0.2911;AN=5008;CS=DUP_gs;EAS_AF=0.2063,0.0397;END=16724682;EUR_AF=0.0577,0.4264;NS=2504;SAS_AF=0.2914,0.2352;SITEPOST=1;SVTYPE=CNV\tGT\t0|2\n17\t17230370\tBI_GS_DEL1_B1_P2529_209\tT\t<CN0>\t100\tPASS\tAC=2777;AF=0.554513;AFR_AF=0.441;AMR_AF=0.5389;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.8016;END=17231247;EUR_AF=0.5199;MC=EM_DL_DEL10419131;NS=2504;SAS_AF=0.5;SVTYPE=DEL\tGT\t1|1\n17\t18359814\tDUP_gs_CNV_17_18359814_18376676\tA\t<CN0>,<CN2>\t.\tPASS\tAC=1023,990;AF=0.204273,0.197684;AFR_AF=0.1142,0.3442;AMR_AF=0.2983,0.1081;AN=5008;CS=DUP_gs;EAS_AF=0.0367,0.1925;END=18376676;EUR_AF=0.4235,0.0437;NS=2504;SAS_AF=0.2065,0.227;SITEPOST=0.9999;SVTYPE=CNV\tGT\t1|0\n17\t18418796\tBI_GS_CNV_17_18418796_18465083\tC\t<CN0>\t100\tPASS\tAC=1263;AF=0.252196;AFR_AF=0.1702;AMR_AF=0.3473;AN=5008;CIEND=0,500;CIPOS=-500,0;CS=DEL_union;EAS_AF=0.0446;END=18465083;EUR_AF=0.4583;NS=2504;SAS_AF=0.2975;SVTYPE=DEL\tGT\t1|0\n17\t18421015\tSI_BD_15171\tC\t<CN0>\t100\tPASS\tAC=1264;AF=0.252396;AFR_AF=0.174;AMR_AF=0.3473;AN=5008;CIEND=-50,136;CIPOS=-136,50;CS=DEL_union;EAS_AF=0.0437;END=18422388;EUR_AF=0.4553;MC=BI_GS_DEL1_B3_P2530_10;NS=2504;SAS_AF=0.2975;SVTYPE=DEL\tGT\t1|0\n17\t18507410\tDUP_gs_CNV_17_18507410_18522042\tA\t<CN0>,<CN2>\t.\tPASS\tAC=3,1928;AF=0.00059904,0.384984;AFR_AF=0,0.413;AMR_AF=0.0014,0.4107;AN=5008;CS=DUP_gs;EAS_AF=0.001,0.3264;END=18522042;EUR_AF=0,0.4851;NS=2504;SAS_AF=0.001,0.2863;SITEPOST=0.9998;SVTYPE=CNV\tGT\t2|0\n17\t18729995\tBI_GS_CNV_17_18729995_18745198\tT\t<CN0>\t100\tPASS\tAC=1913;AF=0.381989;AFR_AF=0.4054;AMR_AF=0.4035;AN=5008;CIEND=0,500;CIPOS=-500,0;CS=DEL_union;EAS_AF=0.3284;END=18745198;EUR_AF=0.4791;NS=2504;SAS_AF=0.2904;SVTYPE=DEL\tGT\t1|0\n17\t26780360\tBI_GS_DEL1_B2_P2538_587\tG\t<CN0>\t100\tPASS\tAC=1312;AF=0.261981;AFR_AF=0.0802;AMR_AF=0.3228;AN=5008;CIEND=-1,1;CIPOS=-1,1;CS=DEL_union;EAS_AF=0.1062;END=26783483;EUR_AF=0.4642;MC=SI_BD_15206,EM_DL_DEL41431,YL_CN_MXL_3052;NS=2504;SAS_AF=0.4172;SVTYPE=DEL\tGT\t0|1\n17\t30852472\tDUP_uwash_chr17_30852472_30872544\tT\t<CN0>\t.\tPASS\tAC=2;AF=0.00039936;AFR_AF=0;AMR_AF=0;AN=5008;CS=DUP_uwash;EAS_AF=0.001;END=30872544;EUR_AF=0.001;NS=2504;SAS_AF=0;SITEPOST=1;SVTYPE=DEL\tGT\t0|1\n17\t32484889\tDEL_pindel_45502\tAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATTCTGATCCTGGATTTGTCAGATGGAAGTACATTTGGGCAGTGTGTGTGTGTGTGTGTGTGTGT\tA\t.\tPASS\tAC=276;AF=0.0551118;AFR_AF=0.0446;AMR_AF=0.0793;AN=5008;CS=DEL_pindel;EAS_AF=0.0149;END=32485002;EUR_AF=0.1083;NS=2504;SAS_AF=0.0389;SITEPOST=0.9888;SVTYPE=DEL\tGT\t1|0\n17\t32872968\tUW_VH_17996\tT\t<CN0>\t100\tPASS\tAC=888;AF=0.177316;AFR_AF=0.0325;AMR_AF=0.2406;AN=5008;CIEND=0,458;CIPOS=-425,0;CS=DEL_union;EAS_AF=0.2123;END=32874613;EUR_AF=0.2515;MC=YL_CN_TSI_3631,UW_VH_7404,EM_DL_DEL10425642,UW_VH_5910,SI_BD_15244,BI_GS_DEL1_B1_P2544_947,YL_CN_STU_3654,YL_CN_GBR_3631,UW_VH_2546;NS=2504;SAS_AF=0.2157;SVTYPE=DEL\tGT\t0|1\n17\t34376278\tDEL_pindel_45551\tTAAAGAAAAACGCTTGGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGCGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCCGACCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAA\tT\t.\tPASS\tAC=3814;AF=0.761581;AFR_AF=0.7277;AMR_AF=0.7378;AN=5008;CS=DEL_pindel;EAS_AF=0.7976;END=34376609;EUR_AF=0.7575;MEINFO=AluYb6_2,1,281,+;NS=2504;SAS_AF=0.7914;SITEPOST=0.96095;SVTYPE=DEL_ALU\tGT\t1|0\n17\t34436099\tDUP_gs_CNV_17_34436099_34482872\tT\t<CN2>,<CN3>,<CN4>\t.\tPASS\tAC=1015,159,28;AF=0.202676,0.0317492,0.00559105;AFR_AF=0.32,0.0711,0.0083;AMR_AF=0.1009,0.0216,0.0043;AN=5008;CS=DUP_gs;EAS_AF=0.1994,0.0169,0.005;END=34482872;EUR_AF=0.1421,0.0189,0.006;NS=2504;SAS_AF=0.182,0.0143,0.0031;SITEPOST=1;SVTYPE=CNV\tGT\t1|0\n17\t35143423\tDEL_pindel_45558\tTAAAGAAGTACACTTGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCAGGCGCGGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAA\tT\t.\tPASS\tAC=1696;AF=0.338658;AFR_AF=0.5083;AMR_AF=0.3718;AN=5008;CS=DEL_pindel;EAS_AF=0.2004;END=35143742;EUR_AF=0.2744;MEINFO=AluYa4_3,1,281,+;NS=2504;SAS_AF=0.2945;SITEPOST=0.99305;SVTYPE=DEL_ALU\tGT\t0|1\n17\t35755635\tUW_VH_16727\tT\t<CN0>\t100\tPASS\tAC=318;AF=0.0634984;AFR_AF=0.031;AMR_AF=0.072;AN=5008;CIEND=0,212;CIPOS=-260,0;CS=DEL_union;EAS_AF=0.0129;END=35760346;EUR_AF=0.1213;MC=BI_GS_DEL1_B3_P2547_28,YL_CN_YRI_4642;NS=2504;SAS_AF=0.0941;SVTYPE=DEL\tGT\t0|1\n17\t35755640\tBI_GS_DEL1_B2_P2547_527\tG\t<CN0>\t100\tPASS\tAC=925;AF=0.184704;AFR_AF=0.1142;AMR_AF=0.1988;AN=5008;CIEND=-16,16;CIPOS=-16,16;CS=DEL_union;EAS_AF=0.0327;END=35758781;EUR_AF=0.337;MC=YL_CN_ESN_3705,UW_VH_2423,EM_DL_DEL41824;NS=2504;SAS_AF=0.2699;SVTYPE=DEL\tGT\t1|1\n17\t36169343\tALU_umary_ALU_11305\tT\t<INS:ME:ALU>\t.\t.\tAC=1702;AF=0.339856;AFR_AF=0.354;AMR_AF=0.3329;AN=5008;CS=ALU_umary;EAS_AF=0.374;EUR_AF=0.3449;MEINFO=AluYa4_5,1,281,-;NS=2504;SAS_AF=0.2853;SITEPOST=1;SVLEN=280;SVTYPE=ALU;TSD=GGATATCTTCTTTT\tGT\t1|0\n17\t36963475\tBI_GS_DEL1_B2_P2548_600\tC\t<CN0>\t100\tPASS\tAC=1093;AF=0.218251;AFR_AF=0.1755;AMR_AF=0.2939;AN=5008;CIEND=-2,3;CIPOS=-2,3;CS=DEL_union;EAS_AF=0.2183;END=36964937;EUR_AF=0.2266;MC=UW_VH_18165,UW_VH_4704,UW_VH_2440,YL_CN_STU_3674,UW_VH_11128,UW_VH_5250,EM_DL_DEL10427239,YL_CN_PJL_3840,YL_CN_YRI_4649,UW_VH_5984;NS=2504;SAS_AF=0.2137;SVTYPE=DEL\tGT\t0|1\n17\t39421554\tYL_CN_GWD_4978\tG\t<CN0>\t100\tPASS\tAC=3374;AF=0.673722;AFR_AF=0.4977;AMR_AF=0.8012;AN=5008;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0.63;END=39432271;EUR_AF=0.7336;MC=EM_DL_DEL41994,UW_VH_10948,SI_BD_15289,BI_GS_DEL1_B4_P2551_83,UW_VH_1963;NS=2504;SAS_AF=0.8047;SVTYPE=DEL\tGT\t1|1\n17\t43576081\tBI_GS_CNV_17_43576081_43589376\tT\t<CN0>\t100\tPASS\tAC=436;AF=0.0870607;AFR_AF=0.0151;AMR_AF=0.1571;AN=5008;CIEND=0,500;CIPOS=-500,0;CS=DEL_union;EAS_AF=0.002;END=43589376;EUR_AF=0.2416;NS=2504;SAS_AF=0.0634;SVTYPE=DEL\tGT\t1|0\n17\t43647443\tBI_GS_DEL1_B3_P2555_15\tA\t<CN0>\t100\tPASS\tAC=413;AF=0.082468;AFR_AF=0.0159;AMR_AF=0.1427;AN=5008;CIEND=-36,36;CIPOS=-36,36;CS=DEL_union;EAS_AF=0.002;END=43649234;EUR_AF=0.2326;NS=2504;SAS_AF=0.0583;SVTYPE=DEL\tGT\t1|0\n17\t44086723\tDEL_pindel_45688\tTCATAGTTCTTAGGCAAATTGGTAAAAATCATTTCTCATCAAAACGCTGATATTTTCACACCTCCCTGGTGTCTGCAGAAAGAACCTTCCAGAAATGCAGTCGTGGGAGACCCATCCAGGCCACCCCTGCTTATGGAAGAGCTGAGAAAAAGCCCCACGGGAGCATTTGCTCAGCTTCCGTTACGCACCTAGTGGCATTGTGGGTGGGAGAGGGCTGGTGGGTGGATGGAAGGAGAAGG\tT\t.\tPASS\tAC=343;AF=0.0684904;AFR_AF=0.0129;AMR_AF=0.1225;AN=5008;CS=DEL_pindel;EAS_AF=0.001;END=44086961;EUR_AF=0.1879;NS=2504;SAS_AF=0.0521;SITEPOST=0.9986;SVTYPE=DEL\tGT\t1|0\n17\t44176394\tDEL_pindel_45690\tTAACAAATACAAGCGGCCGGGCGCGGTGGCTCACGCTTGTAATCCCAGCACTTTGGGAGGCCGAGGCAGGCGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAAATTAGCCGGGCGTGATGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGAAGGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCACTCTCGCCTGGGCCACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAACAAAACAAAAAAAA\tT\t.\tPASS\tAC=395;AF=0.0788738;AFR_AF=0.0151;AMR_AF=0.1455;AN=5008;CS=DEL_pindel;EAS_AF=0.002;END=44176717;EUR_AF=0.2157;MEINFO=AluYi,1,281,+;NS=2504;SAS_AF=0.0562;SITEPOST=1;SVTYPE=DEL_ALU\tGT\t1|0\n17\t44223907\tDEL_pindel_45694\tCAAGAAGTTGAGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAAGCCGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCAGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAA\tC\t.\tPASS\tAC=412;AF=0.0822684;AFR_AF=0.0159;AMR_AF=0.1542;AN=5008;CS=DEL_pindel;EAS_AF=0.001;END=44224221;EUR_AF=0.2227;MEINFO=AluYa5,1,281,+;NS=2504;SAS_AF=0.0603;SITEPOST=1;SVTYPE=DEL_ALU\tGT\t1|0\n17\t44230893\tDUP_gs_CNV_17_44230893_44262697\tT\t<CN2>,<CN3>\t.\tPASS\tAC=1117,21;AF=0.223043,0.00419329;AFR_AF=0.0182,0;AMR_AF=0.2435,0.0043;AN=5008;CS=DUP_gs;EAS_AF=0.001,0;END=44262697;EUR_AF=0.4105,0.005;NS=2504;SAS_AF=0.5215,0.0133;SITEPOST=1;SVTYPE=CNV\tGT\t1|0\n17\t44341412\tDUP_gs_CNV_17_44341412_44366497\tG\t<CN2>,<CN3>\t.\tPASS\tAC=758,412;AF=0.151358,0.0822684;AFR_AF=0.0098,0.0106;AMR_AF=0.1009,0.1513;AN=5008;CS=DUP_gs;EAS_AF=0,0.001;END=44366497;EUR_AF=0.2038,0.2296;NS=2504;SAS_AF=0.4806,0.0624;SITEPOST=0.9997;SVTYPE=CNV\tGT\t2|0\n17\t45966643\tALU_umary_ALU_11332\tT\t<INS:ME:ALU>\t.\t.\tAC=66;AF=0.0131789;AFR_AF=0.0098;AMR_AF=0.0274;AN=5008;CS=ALU_umary;EAS_AF=0.001;EUR_AF=0.0239;MEINFO=AluUndef,1,281,+;NS=2504;SAS_AF=0.0092;SITEPOST=1;SVLEN=280;SVTYPE=ALU;TSD=null\tGT\t0|1\n17\t51957128\tALU_umary_ALU_11356\tC\t<INS:ME:ALU>\t.\t.\tAC=1138;AF=0.227236;AFR_AF=0.2549;AMR_AF=0.2104;AN=5008;CS=ALU_umary;EAS_AF=0.1577;EUR_AF=0.2982;MEINFO=AluYa5,3,269,+;NS=2504;SAS_AF=0.2004;SITEPOST=1;SVLEN=266;SVTYPE=ALU;TSD=AGAAAACCCC\tGT\t0|1\n17\t52705176\tDEL_pindel_45809\tAAATCATCTGCTTGCAGTATATTTGCAGAAACCAAATAATCAAAGGGACTT\tA\t.\tPASS\tAC=1836;AF=0.366613;AFR_AF=0.5439;AMR_AF=0.3919;AN=5008;CS=DEL_pindel;EAS_AF=0.3899;END=52705226;EUR_AF=0.3082;NS=2504;SAS_AF=0.1452;SITEPOST=0.9999;SVTYPE=DEL\tGT\t1|0\n17\t54947583\tALU_umary_ALU_11371\tA\t<INS:ME:ALU>\t.\t.\tAC=2044;AF=0.408147;AFR_AF=0.3495;AMR_AF=0.428;AN=5008;CS=ALU_umary;EAS_AF=0.5179;EUR_AF=0.4304;MEINFO=AluUndef,13,281,+;NS=2504;SAS_AF=0.3374;SITEPOST=1;SVLEN=268;SVTYPE=ALU;TSD=AAAATTAAGAAATGATTTGA\tGT\t0|1\n17\t55687808\tBI_GS_DEL1_B1_P2567_687\tG\t<CN0>\t100\tPASS\tAC=2635;AF=0.526158;AFR_AF=0.4259;AMR_AF=0.5605;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.4494;END=55689918;EUR_AF=0.6272;MC=SI_BD_15373,EM_DL_DEL42546,UW_VH_12969,YL_CN_LWK_3539,UW_VH_22777,UW_VH_8377,UW_VH_4906,UW_VH_15418,YL_CN_GIH_2879,YL_CN_CDX_3187,UW_VH_1153,UW_VH_5270,UW_VH_18943,UW_VH_5233;NS=2504;SAS_AF=0.6125;SVTYPE=DEL\tGT\t1|0\n17\t56206964\tDUP_gs_CNV_17_56206964_56213515\tT\t<CN0>,<CN2>\t.\tPASS\tAC=153,5;AF=0.0305511,0.0009984;AFR_AF=0.0061,0;AMR_AF=0.0447,0;AN=5008;CS=DUP_gs;EAS_AF=0,0.005;END=56213515;EUR_AF=0.0974,0;MC=BI_GS_DEL1_B1_P2568_176,YL_CN_CLM_3225,UW_VH_2264;NS=2504;SAS_AF=0.0164,0;SITEPOST=1;SVTYPE=CNV\tGT\t1|0\n17\t56210429\tEM_DL_DEL10435213\tG\t<CN0>\t100\tPASS\tAC=135;AF=0.0269569;AFR_AF=0.0053;AMR_AF=0.0331;AN=5008;CIEND=-150,150;CIPOS=-150,150;CS=DEL_union;EAS_AF=0;END=56211237;EUR_AF=0.0885;NS=2504;SAS_AF=0.0164;SVTYPE=DEL\tGT\t1|0\n17\t61565904\tALU_umary_ALU_11398\tT\t<INS:ME:ALU>\t.\t.\tAC=1223;AF=0.244209;AFR_AF=0.1974;AMR_AF=0.2579;AN=5008;CS=ALU_umary;EAS_AF=0.2956;EUR_AF=0.2197;MEINFO=AluYa5b1,10,281,-;NS=2504;SAS_AF=0.2699;SITEPOST=1;SVLEN=271;SVTYPE=ALU;TSD=ATACAGTCACTTTT\tGT\t1|1\n17\t62213208\tSI_BD_15405\tC\t<CN0>\t100\tPASS\tAC=2896;AF=0.578275;AFR_AF=0.2481;AMR_AF=0.7767;AN=5008;CIEND=-53,204;CIPOS=-204,50;CS=DEL_union;EAS_AF=0.755;END=62214203;EUR_AF=0.6551;MC=YL_CN_STU_3729,BI_GS_DEL1_B1_P2574_184,YL_CN_ITU_3717,UW_VH_1612,YL_CN_PUR_4496,YL_CN_CHS_3883;NS=2504;SAS_AF=0.6227;SVTYPE=DEL\tGT\t0|1\n17\t65514573\tDEL_pindel_46037\tTTAAATAAATAATGGGGTTGAAATCTCTACCAGGGCTGTTTCAGTACTTATTTGGAAGAAGGATG\tT\t.\tPASS\tAC=146;AF=0.0291534;AFR_AF=0.003;AMR_AF=0.0519;AN=5008;CS=DEL_pindel;EAS_AF=0;END=65514637;EUR_AF=0.0755;NS=2504;SAS_AF=0.0307;SITEPOST=0.9991;SVTYPE=DEL\tGT\t1|0\n17\t65520854\tDEL_pindel_46038\tTGAAGGTTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCCGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCATGAGCCACCGCGCCCGGCC\tT\t.\tPASS\tAC=3930;AF=0.784744;AFR_AF=0.8048;AMR_AF=0.8112;AN=5008;CS=DEL_pindel;EAS_AF=0.7748;END=65521184;EUR_AF=0.7575;MEINFO=AluYb6_2,1,281,-;NS=2504;SAS_AF=0.7771;SITEPOST=0.9925;SVTYPE=DEL_ALU\tGT\t1|1\n17\t65727354\tDEL_pindel_46044\tTTCGTGCACAAAAGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGTTCTGTCGCCCAGGCGGGACTGCTGTGGCGCGATCTCCGCTCACTGCAAGCTCCGCCTTCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCGCTGCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAG\tT\t.\tPASS\tAC=2954;AF=0.589856;AFR_AF=0.5582;AMR_AF=0.5951;AN=5008;CS=DEL_pindel;EAS_AF=0.623;END=65727630;EUR_AF=0.5915;MEINFO=AluY,37,281,-;NS=2504;SAS_AF=0.593;SITEPOST=0.99285;SVTYPE=DEL_ALU\tGT\t1|1\n17\t72393115\tDEL_pindel_46165\tTCACCACATCTGGCTAATTTTTGTAGTTTTAGTAGCGATGGGGTTTCACCATGTTGGCCAGGCTGATCTCGAACTCCTGACCTCAGGTGACCCACCTGCCTCGGCCTCCCAAAGTGCTGGGATTCCAGGCATGAC\tT\t.\tPASS\tAC=3648;AF=0.728435;AFR_AF=0.4304;AMR_AF=0.8372;AN=5008;CS=DEL_pindel;EAS_AF=0.869;END=72393249;EUR_AF=0.8539;NS=2504;SAS_AF=0.7802;SITEPOST=0.9991;SVTYPE=DEL\tGT\t1|1\n17\t74362239\tUW_VH_1160\tA\t<CN0>\t100\tPASS\tAC=900;AF=0.179712;AFR_AF=0.2844;AMR_AF=0.121;AN=5008;CIEND=0,479;CIPOS=-404,0;CS=DEL_union;EAS_AF=0.13;END=74365300;EUR_AF=0.0954;MC=BI_GS_DEL1_B1_P2586_246,YL_CN_CHB_3749,EM_DL_DEL43030;NS=2504;SAS_AF=0.2178;SVTYPE=DEL\tGT\t1|0\n17\t74987520\tDEL_pindel_46220\tAGGCGTTTTTTTTTTTTTTTTTTTTTTGTTTTTTTTTTTTGAGACGGAGTCTCGCTGTCGCCCAGGCTGGAGTGCAGTGGCGCAATCTCGGCTCACTGCAGGCTCCGCCCCCTGGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCTACCACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC\tA\t.\tPASS\tAC=4444;AF=0.88738;AFR_AF=0.8986;AMR_AF=0.8718;AN=5008;CS=DEL_pindel;EAS_AF=0.9425;END=74987839;EUR_AF=0.8648;MEINFO=AluYc1,1,281,-;NS=2504;SAS_AF=0.8497;SITEPOST=0.99945;SVTYPE=DEL_ALU\tGT\t0|1\n17\t76282240\tEM_DL_DEL10442986\tG\t<CN0>\t100\tPASS\tAC=2400;AF=0.479233;AFR_AF=0.3956;AMR_AF=0.4481;AN=5008;CIEND=-150,150;CIPOS=-150,150;CS=DEL_union;EAS_AF=0.6032;END=76283435;EUR_AF=0.5249;MC=YL_CN_GIH_2894,UW_VH_1162,YL_CN_KHV_3936,YL_CN_STU_3747,BI_GS_DEL1_B4_P2588_62,YL_CN_PUR_4515,SI_BD_15495,YL_CN_ITU_3730,UW_VH_11388,YL_CN_CEU_4662,YL_CN_CHS_3898;NS=2504;SAS_AF=0.4397;SVTYPE=DEL\tGT\t1|0\n17\t78056052\tALU_umary_ALU_11467\tG\t<INS:ME:ALU>\t.\t.\tAC=2823;AF=0.563698;AFR_AF=0.5356;AMR_AF=0.5663;AN=5008;CS=ALU_umary;EAS_AF=0.6052;EUR_AF=0.5895;MEINFO=AluY,0,0,-;NS=2504;SAS_AF=0.5307;SITEPOST=1;SVLEN=0;SVTYPE=ALU;TSD=CAGGCGTG\tGT\t0|1\n17\t79577680\tDEL_pindel_46359\tTAAAATGACACAAACCAGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGCGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCCGGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAA\tT\t.\tPASS\tAC=1805;AF=0.360423;AFR_AF=0.3245;AMR_AF=0.3646;AN=5008;CS=DEL_pindel;EAS_AF=0.2014;END=79578003;EUR_AF=0.5775;MEINFO=AluYb6_2,1,281,+;NS=2504;SAS_AF=0.3466;SITEPOST=0.9996;SVTYPE=DEL_ALU\tGT\t0|1\n17\t80185492\tDEL_pindel_46373\tGAGCACCACCTGCCCTGGGCGGGAGCACCACCTGCCCTGGGCGGGAGCACCACCTGCCCTGGGCGGGAGC\tG\t.\tPASS\tAC=3279;AF=0.654752;AFR_AF=0.4289;AMR_AF=0.7219;AN=5008;CS=DEL_pindel;EAS_AF=0.88;END=80185561;EUR_AF=0.6431;NS=2504;SAS_AF=0.6922;SITEPOST=0.98555;SVTYPE=DEL\tGT\t1|1\n17\t81025596\tDEL_pindel_46381\tCCTTGTGTCACACTCATCTTACACTGTGCTTTATCTTGTTACCCTGCAGGCATTCACCTCAACCCCTCCCGTCCCCTCTGGGATGAG\tC\t.\tPASS\tAC=2369;AF=0.473043;AFR_AF=0.4826;AMR_AF=0.3646;AN=5008;CS=DEL_pindel;EAS_AF=0.626;END=81025682;EUR_AF=0.4165;NS=2504;SAS_AF=0.4376;SITEPOST=0.99115;SVTYPE=DEL\tGT\t0|1\n18\t207028\tBI_GS_DEL1_B5_P2594_125\tA\t<CN0>\t100\tPASS\tAC=640;AF=0.127796;AFR_AF=0.0764;AMR_AF=0.1282;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.006;END=207707;EUR_AF=0.2107;MC=SI_BD_15588,UW_VH_2338,DEL_pindel_46392;NS=2504;SAS_AF=0.2372;SVTYPE=DEL\tGT\t0|1\n18\t853490\tALU_umary_ALU_11484\tC\t<INS:ME:ALU>\t.\t.\tAC=750;AF=0.14976;AFR_AF=0.2239;AMR_AF=0.1441;AN=5008;CS=ALU_umary;EAS_AF=0.0903;EUR_AF=0.159;MEINFO=AluYa1_1,1,281,+;NS=2504;SAS_AF=0.1053;SITEPOST=1;SVLEN=280;SVTYPE=ALU;TSD=AAGAAATCATAC\tGT\t1|0\n18\t1235790\tALU_umary_ALU_11485\tA\t<INS:ME:ALU>\t.\t.\tAC=2924;AF=0.583866;AFR_AF=0.2927;AMR_AF=0.7118;AN=5008;CS=ALU_umary;EAS_AF=0.6915;EUR_AF=0.7038;MEINFO=AluYc2,1,281,+;NS=2504;SAS_AF=0.6524;SITEPOST=1;SVLEN=280;SVTYPE=ALU;TSD=AAAAATAATTACA\tGT\t0|1\n18\t2472723\tDEL_pindel_46439\tGTCTCTTGCGTTTTTGGCTGTGAAAAGTGGAAGGGCCACATCTCTCTTTCTGGAAAAGGTTTAAAAAATGTGCTACAAAGGAATTATTTATTTGGGATTTTGGTCTTGTATGATA\tG\t.\tPASS\tAC=3830;AF=0.764776;AFR_AF=0.3396;AMR_AF=0.8415;AN=5008;CS=DEL_pindel;EAS_AF=0.872;END=2472837;EUR_AF=0.9841;NS=2504;SAS_AF=0.9489;SITEPOST=1;SVTYPE=DEL\tGT\t1|1\n18\t3997014\tDEL_pindel_46471\tTAAGTTGCAGAGTTTTCTTTTTTTTTTTTTTCATATTTTAAAATAAGCTTTATTTAGATTTTTTTTTAATATTTTATATTTGCATCCATGCCTTCGAGAAACCTTTCCCACGGGAAAGGTTATTTTCGTCTAATGTTACCCATAACTCATTCGCTATTTGACGTAGTTCTCTTAAATAAATCATCCTTTAGTAACTCTTAGAATTATCTCCTAATTTACAAAAACTGAAATGAAAAGGAACTACTAAATCATTAGCAGGAGTGGTTGCAATCTTATTTTCTTGTAAGTAAAGGGAAAATGATAAAAATCAACCAGAAAAGAAATTCATGGGCAAGAAAAGTATTTTCTAAAATCTGTCTCCGTAGAGAAAGATGCCAGCTTGGGTCGCTCCCCCTCACCCCTAGGCTCGGTTAAACAGTTTGGTCAAAGGAGGACAGAAAAGTCCTTATGAGGGCCTC\tT\t.\tPASS\tAC=1619;AF=0.323283;AFR_AF=0.354;AMR_AF=0.3112;AN=5008;CS=DEL_pindel;EAS_AF=0.3175;END=3997471;EUR_AF=0.2515;NS=2504;SAS_AF=0.3701;SITEPOST=0.9853;SVTYPE=DEL\tGT\t1|0\n18\t4955590\tBI_GS_DEL1_B3_P2598_42\tG\t<CN0>\t100\tPASS\tAC=1734;AF=0.346246;AFR_AF=0.1067;AMR_AF=0.4827;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.373;END=4955987;EUR_AF=0.5328;NS=2504;SAS_AF=0.3538;SVTYPE=DEL\tGT\t0|1\n18\t5209320\tYL_CN_YRI_4753\tG\t<CN0>\t100\tPASS\tAC=1445;AF=0.288538;AFR_AF=0.1543;AMR_AF=0.3314;AN=5008;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0.6964;END=5210888;EUR_AF=0.0706;NS=2504;SAS_AF=0.2434;SVTYPE=DEL\tGT\t0|1\n18\t5209658\tUW_VH_2265\tA\t<CN0>\t100\tPASS\tAC=1444;AF=0.288339;AFR_AF=0.1536;AMR_AF=0.3314;AN=5008;CIEND=0,287;CIPOS=-417,0;CS=DEL_union;EAS_AF=0.6964;END=5210654;EUR_AF=0.0706;MC=BI_GS_DEL1_B1_P2599_199,UW_VH_6134,SI_BD_15634;NS=2504;SAS_AF=0.2434;SVTYPE=DEL\tGT\t0|1\n18\t5324643\tEM_DL_DEL10449352\tA\t<CN0>\t100\tPASS\tAC=2183;AF=0.435903;AFR_AF=0.3404;AMR_AF=0.464;AN=5008;CIEND=-150,150;CIPOS=-150,150;CS=DEL_union;EAS_AF=0.3036;END=5326242;EUR_AF=0.6213;MC=YL_CN_ACB_4229,YL_CN_PJL_3964,YL_CN_GBR_3744,YL_CN_YRI_4754,YL_CN_ESN_3785,YL_CN_CEU_4692,YL_CN_GWD_5058,YL_CN_IBS_3417,YL_CN_MXL_3161,YL_CN_JPT_3981;NS=2504;SAS_AF=0.4908;SVTYPE=DEL\tGT\t1|1\n18\t5325026\tBI_GS_DEL1_B2_P2599_249\tG\t<CN0>\t100\tPASS\tAC=2175;AF=0.434305;AFR_AF=0.3359;AMR_AF=0.4611;AN=5008;CIEND=-18,18;CIPOS=-18,18;CS=DEL_union;EAS_AF=0.3065;END=5325315;EUR_AF=0.6213;NS=2504;SAS_AF=0.4877;SVTYPE=DEL\tGT\t1|1\n18\t5457105\tDEL_pindel_46506\tAAAAACTGAAACCATAAGGCAAACCGCACTCTCAACATGGCTTCAAGATAGGTACAGCCTTTTCCTGTAAGCAACAACTCTACCGTTCTTTTATCTGTAGG\tA\t.\tPASS\tAC=1363;AF=0.272165;AFR_AF=0.1097;AMR_AF=0.3674;AN=5008;CS=DEL_pindel;EAS_AF=0.372;END=5457205;EUR_AF=0.3241;NS=2504;SAS_AF=0.2679;SITEPOST=0.9994;SVTYPE=DEL\tGT\t1|0\n18\t9225123\tBI_GS_DEL1_B5_P2603_249\tT\t<CN0>\t100\tPASS\tAC=3031;AF=0.605232;AFR_AF=0.3548;AMR_AF=0.7089;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.6617;END=9225460;EUR_AF=0.6581;MC=UW_VH_1168;NS=2504;SAS_AF=0.7577;SVTYPE=DEL\tGT\t0|1\n18\t9287084\tALU_umary_ALU_11528\tT\t<INS:ME:ALU>\t.\t.\tAC=220;AF=0.0439297;AFR_AF=0.0923;AMR_AF=0.036;AN=5008;CS=ALU_umary;EAS_AF=0.002;EUR_AF=0.0517;MEINFO=AluYb7_4,2,272,-;NS=2504;SAS_AF=0.0194;SITEPOST=1;SVLEN=270;SVTYPE=ALU;TSD=AATACTGTGTGTTTTTT\tGT\t1|0\n18\t9385391\tDEL_pindel_46556\tTAAAAGAAAGAACGGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAAATACAAAAAATTAGCCGGGCGCGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCCGACCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAA\tT\t.\tPASS\tAC=2004;AF=0.40016;AFR_AF=0.5401;AMR_AF=0.3905;AN=5008;CS=DEL_pindel;EAS_AF=0.252;END=9385715;EUR_AF=0.3966;MEINFO=AluYb6_2,1,281,+;NS=2504;SAS_AF=0.3742;SITEPOST=0.999;SVTYPE=DEL_ALU\tGT\t1|0\n18\t9621959\tUW_VH_42\tA\t<CN0>\t100\tPASS\tAC=4153;AF=0.829273;AFR_AF=0.8185;AMR_AF=0.7824;AN=5008;CIEND=0,637;CIPOS=-672,0;CS=DEL_union;EAS_AF=0.9663;END=9622233;EUR_AF=0.7097;NS=2504;SAS_AF=0.8589;SVTYPE=DEL\tGT\t1|1\n18\t10222279\tBI_GS_DEL1_B2_P2604_203\tA\t<CN0>\t100\tPASS\tAC=1984;AF=0.396166;AFR_AF=0.1293;AMR_AF=0.4207;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.8879;END=10223606;EUR_AF=0.2505;MC=YL_CN_JPT_3987,UW_VH_2136,SI_BD_15664,YL_CN_CEU_4696;NS=2504;SAS_AF=0.3824;SVTYPE=DEL\tGT\t1|0\n18\t10331018\tDEL_pindel_46577\tCCATTCTAAACCCTTTCTTCATCCTGCGTTGAGTTCGAGTTTCAGTTAAACTTGTCATCTCCATCAAATCACCCGGGTAGGGCAGGAGGTCATTTTCTTTATCTATCGATCACTCTATCTATCTATCATCTCTCACCGTAG\tC\t.\tPASS\tAC=877;AF=0.17512;AFR_AF=0.093;AMR_AF=0.2104;AN=5008;CS=DEL_pindel;EAS_AF=0.2202;END=10331158;EUR_AF=0.2763;NS=2504;SAS_AF=0.1104;SITEPOST=0.9991;SVTYPE=DEL\tGT\t1|0\n18\t11509065\tCINV_delly_INV00047622\tA\t<INV>\t.\tPASS\tAC=1663;AF=0.332069;AFR_AF=0.388;AMR_AF=0.2925;AN=5008;CIEND=-268,268;CIPOS=-268,268;CS=CINV_delly;EAS_AF=0.4345;END=11511527;EUR_AF=0.2326;IMPRECISE;NS=2504;SAS_AF=0.2812;SVTYPE=INV\tGT\t1|0\n18\t11509705\tEM_DL_DEL10452041\tG\t<CN0>\t100\tPASS\tAC=2417;AF=0.482628;AFR_AF=0.6082;AMR_AF=0.4467;AN=5008;CIEND=-150,150;CIPOS=-150,150;CS=DEL_union;EAS_AF=0.5853;END=11511474;EUR_AF=0.3002;MC=SI_BD_15669,YL_CN_GWD_5062,BI_GS_DEL1_B1_P2605_481,YL_CN_ITU_3754,YL_CN_MSL_3454,YL_CN_CHB_3784,YL_CN_FIN_3542,YL_CN_MXL_3165,UW_VH_1170,YL_CN_GIH_2917;NS=2504;SAS_AF=0.4202;SVTYPE=DEL\tGT\t1|0\n18\t12503560\tBI_GS_DEL1_B5_P2606_440\tT\t<CN0>\t100\tPASS\tAC=406;AF=0.0810703;AFR_AF=0.1649;AMR_AF=0.0706;AN=5008;CIEND=-3,4;CIPOS=-3,4;CS=DEL_union;EAS_AF=0.001;END=12504493;EUR_AF=0.1133;MC=UW_VH_14208,BI_GS_DEL1_B5_P2606_441,UW_VH_2633;NS=2504;SAS_AF=0.0245;SVTYPE=DEL\tGT\t1|0\n18\t14803791\tDUP_gs_CNV_18_14803791_14811140\tA\t<CN0>,<CN2>,<CN3>,<CN4>\t.\tPASS\tAC=214,137,6,1;AF=0.0427316,0.0273562,0.00119808,0.00019968;AFR_AF=0.0711,0.0613,0.0015,0;AMR_AF=0.0202,0.0101,0.0029,0;AN=5008;CS=DUP_gs;EAS_AF=0.0109,0.0268,0.001,0.001;END=14811140;EUR_AF=0.0318,0.001,0,0;NS=2504;SAS_AF=0.0644,0.0215,0.001,0;SITEPOST=0.99975;SVTYPE=CNV\tGT\t1|1\n18\t15095262\tL1_umary_LINE1_2792\tT\t<INS:ME:LINE1>\t.\t.\tAC=2621;AF=0.523363;AFR_AF=0.1596;AMR_AF=0.6643;AN=5008;CS=L1_umary;EAS_AF=0.6756;EUR_AF=0.666;MEINFO=LINE1,1,5991,-;NS=2504;SAS_AF=0.6115;SITEPOST=1;SVLEN=5990;SVTYPE=LINE1;TSD=GAGGACACTATTCTT\tGT\t1|1\n18\t24571615\tBI_GS_DEL1_B3_P2618_26\tA\t<CN0>\t100\tPASS\tAC=1734;AF=0.346246;AFR_AF=0.2148;AMR_AF=0.451;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.4881;END=24572338;EUR_AF=0.4105;MC=DEL_pindel_46763,UW_VH_1910,SI_BD_15740;NS=2504;SAS_AF=0.2372;SVTYPE=DEL\tGT\t1|0\n18\t24791588\tUW_VH_2339\tC\t<CN0>\t100\tPASS\tAC=1364;AF=0.272364;AFR_AF=0.2126;AMR_AF=0.1225;AN=5008;CIEND=0,462;CIPOS=-508,0;CS=DEL_union;EAS_AF=0.4722;END=24791874;EUR_AF=0.164;MC=DEL_pindel_46770,BI_GS_DEL1_B4_P2618_181;NS=2504;SAS_AF=0.365;SVTYPE=DEL\tGT\t0|1\n18\t25851171\tALU_umary_ALU_11597\tT\t<INS:ME:ALU>\t.\t.\tAC=568;AF=0.113419;AFR_AF=0.2231;AMR_AF=0.1225;AN=5008;CS=ALU_umary;EAS_AF=0.0149;EUR_AF=0.1113;MEINFO=AluYb8,1,268,-;NS=2504;SAS_AF=0.0624;SITEPOST=1;SVLEN=267;SVTYPE=ALU;TSD=null\tGT\t1|0\n18\t26363743\tDEL_pindel_46789\tCAAAAGAAAAGGCATTGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAAGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAGAAAAAAAAAA\tC\t.\tPASS\tAC=3763;AF=0.751398;AFR_AF=0.7027;AMR_AF=0.7608;AN=5008;CS=DEL_pindel;EAS_AF=0.7569;END=26364064;EUR_AF=0.8012;MEINFO=AluYa5,1,281,+;NS=2504;SAS_AF=0.7536;SITEPOST=0.9533;SVTYPE=DEL_ALU\tGT\t1|1\n18\t27629680\tDEL_pindel_46816\tCAAAAGTGAGAGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGCCAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA\tC\t.\tPASS\tAC=2729;AF=0.544928;AFR_AF=0.562;AMR_AF=0.5029;AN=5008;CS=DEL_pindel;EAS_AF=0.4881;END=27630006;EUR_AF=0.669;MEINFO=AluYa5,1,281,+;NS=2504;SAS_AF=0.4826;SITEPOST=0.9976;SVTYPE=DEL_ALU\tGT\t0|1\n18\t27800861\tALU_umary_ALU_11610\tT\t<INS:ME:ALU>\t.\t.\tAC=2683;AF=0.535743;AFR_AF=0.5272;AMR_AF=0.5014;AN=5008;CS=ALU_umary;EAS_AF=0.4415;EUR_AF=0.6431;MEINFO=AluYb7_2,1,275,-;NS=2504;SAS_AF=0.5583;SITEPOST=1;SVLEN=274;SVTYPE=ALU;TSD=GGAAATAGGGTCTT\tGT\t1|0\n18\t27872570\tDEL_pindel_46822\tTAGAAATATATTTATCTGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGGGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA\tT\t.\tPASS\tAC=2582;AF=0.515575;AFR_AF=0.4697;AMR_AF=0.5403;AN=5008;CS=DEL_pindel;EAS_AF=0.619;END=27872899;EUR_AF=0.4682;MEINFO=AluYa4_5,1,281,+;NS=2504;SAS_AF=0.502;SITEPOST=0.9801;SVTYPE=DEL_ALU\tGT\t1|0\n18\t31746705\tDEL_pindel_46897\tTAATAGTAAAAAAAAGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAAATACAAAAAATTAGCCGGGCGCGGTGGCAGGCGCCTGTAGTCCCAGCTACTGGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGAGATTGTGCCACTGCAGTCCGCAGTCCGGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA\tT\t.\tPASS\tAC=1742;AF=0.347843;AFR_AF=0.32;AMR_AF=0.4251;AN=5008;CS=DEL_pindel;EAS_AF=0.3621;END=31747042;EUR_AF=0.3956;MEINFO=AluYb6_2,1,281,+;NS=2504;SAS_AF=0.2669;SITEPOST=0.99065;SVTYPE=DEL_ALU\tGT\t1|0\n18\t32530967\tBI_GS_DEL1_B3_P2626_31\tA\t<CN0>\t100\tPASS\tAC=3651;AF=0.729034;AFR_AF=0.4486;AMR_AF=0.781;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.9812;END=32531232;EUR_AF=0.7654;NS=2504;SAS_AF=0.774;SVTYPE=DEL\tGT\t0|1\n18\t35306041\tBI_GS_DEL1_B3_P2629_10\tC\t<CN0>\t100\tPASS\tAC=2645;AF=0.528155;AFR_AF=0.2897;AMR_AF=0.5576;AN=5008;CIEND=-8,9;CIPOS=-8,9;CS=DEL_union;EAS_AF=0.7063;END=35306639;EUR_AF=0.662;MC=UW_VH_1182;NS=2504;SAS_AF=0.5082;SVTYPE=DEL\tGT\t0|1\n18\t35315621\tDEL_pindel_46981\tACCTACTGTGATTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGGGGCGCAATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCAGCC\tA\t.\tPASS\tAC=2763;AF=0.551717;AFR_AF=0.6036;AMR_AF=0.5245;AN=5008;CS=DEL_pindel;EAS_AF=0.5913;END=35315939;EUR_AF=0.5706;MEINFO=AluYa4_5,1,281,-;NS=2504;SAS_AF=0.4407;SITEPOST=0.9937;SVTYPE=DEL_ALU\tGT\t0|1\n18\t36512546\tALU_umary_ALU_11637\tA\t<INS:ME:ALU>\t.\t.\tAC=2440;AF=0.48722;AFR_AF=0.3971;AMR_AF=0.5692;AN=5008;CS=ALU_umary;EAS_AF=0.4593;EUR_AF=0.5388;MEINFO=AluUndef,1,281,+;NS=2504;SAS_AF=0.5266;SITEPOST=1;SVLEN=280;SVTYPE=ALU;TSD=AAAAGCAAATTTGA\tGT\t1|0\n18\t37061632\tDEL_pindel_47020\tTAAAGAATCAGATTCGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGCGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCCGACCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAA\tT\t.\tPASS\tAC=3078;AF=0.614617;AFR_AF=0.4516;AMR_AF=0.5461;AN=5008;CS=DEL_pindel;EAS_AF=0.62;END=37061962;EUR_AF=0.7694;MEINFO=AluYb6_2,1,281,+;NS=2504;SAS_AF=0.7188;SITEPOST=0.9929;SVTYPE=DEL_ALU\tGT\t0|1\n18\t38006382\tUW_VH_1617\tA\t<CN0>\t100\tPASS\tAC=1754;AF=0.35024;AFR_AF=0.205;AMR_AF=0.353;AN=5008;CIEND=0,500;CIPOS=-494,0;CS=DEL_union;EAS_AF=0.5446;END=38006996;EUR_AF=0.167;MC=BI_GS_DEL1_B1_P2632_10,SI_BD_15809,UW_VH_19594;NS=2504;SAS_AF=0.5327;SVTYPE=DEL\tGT\t1|1\n18\t38864885\tYL_CN_CHS_3966\tG\t<CN0>\t100\tPASS\tAC=4731;AF=0.944688;AFR_AF=0.8782;AMR_AF=0.9597;AN=5008;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0.9812;END=38868159;EUR_AF=0.9732;MC=YL_CN_JPT_4022,YL_CN_STU_3796,YL_CN_KHV_4024,YL_CN_TSI_3762,EM_DL_DEL44184,SI_BD_15814;NS=2504;SAS_AF=0.9571;SVTYPE=DEL\tGT\t1|1\n18\t43261003\tDEL_pindel_47131\tTCTGAGGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCATTGCAAGCTCCACCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC\tT\t.\tPASS\tAC=4187;AF=0.836062;AFR_AF=0.6868;AMR_AF=0.8703;AN=5008;CS=DEL_pindel;EAS_AF=0.9087;END=43261328;EUR_AF=0.8757;MEINFO=AluYa5,1,281,-;NS=2504;SAS_AF=0.8978;SITEPOST=0.9919;SVTYPE=DEL_ALU\tGT\t0|1\n18\t44338417\tDEL_pindel_47155\tTCACAGGTAGGCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCCGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGC\tT\t.\tPASS\tAC=2518;AF=0.502796;AFR_AF=0.5734;AMR_AF=0.5;AN=5008;CS=DEL_pindel;EAS_AF=0.5575;END=44338754;EUR_AF=0.4026;MEINFO=AluYb6_2,2,281,-;NS=2504;SAS_AF=0.456;SITEPOST=0.9962;SVTYPE=DEL_ALU\tGT\t0|1\n18\t44715166\tDEL_pindel_47163\tTGAAATTTCAAAGCATCTTATTAAAGAGAAGATGCTGAAAGCTTCAAAGGGGGAAAAATGTTATCTATAAAGAAATAA\tT\t.\tPASS\tAC=1557;AF=0.310903;AFR_AF=0.2814;AMR_AF=0.3271;AN=5008;CS=DEL_pindel;EAS_AF=0.1855;END=44715243;EUR_AF=0.4394;NS=2504;SAS_AF=0.3364;SITEPOST=0.9995;SVTYPE=DEL\tGT\t1|0\n18\t45099894\tDEL_pindel_47173\tTAAAAAGTAGCTGCAGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGACGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACACGGTGAAACCCCATCTCTACTAAAAATACAAAAATTAGCCGGGCATGGTGGCGCGTGCCTGTAGTCCCAGCTACACAGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGTCGAGATCGCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAA\tT\t.\tPASS\tAC=458;AF=0.0914537;AFR_AF=0.115;AMR_AF=0.0476;AN=5008;CS=DEL_pindel;EAS_AF=0.0635;END=45100206;EUR_AF=0.1302;MEINFO=AluYg,1,281,+;NS=2504;SAS_AF=0.0798;SITEPOST=1;SVTYPE=DEL_ALU\tGT\t0|1\n18\t45996143\tDEL_pindel_47192\tTAGAAAATAGGTATCATGGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAA\tT\t.\tPASS\tAC=3474;AF=0.69369;AFR_AF=0.6687;AMR_AF=0.683;AN=5008;CS=DEL_pindel;EAS_AF=0.7351;END=45996460;EUR_AF=0.6879;MEINFO=AluYa4_5,1,281,+;NS=2504;SAS_AF=0.6984;SITEPOST=0.9725;SVTYPE=DEL_ALU\tGT\t1|0\n18\t46159351\tDEL_pindel_47195\tTAGGGTTGCATACGGATGTGCACGAAGCCTCAGGGTCTGATTTGTGCGTGCCCATCAGGAGGCCCCATCCTGCCAAGGC\tT\t.\tPASS\tAC=3102;AF=0.619409;AFR_AF=0.2042;AMR_AF=0.7594;AN=5008;CS=DEL_pindel;EAS_AF=0.9335;END=46159429;EUR_AF=0.6789;NS=2504;SAS_AF=0.6963;SITEPOST=0.9994;SVTYPE=DEL\tGT\t1|0\n18\t47147440\tALU_umary_ALU_11686\tC\t<INS:ME:ALU>\t.\t.\tAC=2147;AF=0.428714;AFR_AF=0.4312;AMR_AF=0.4121;AN=5008;CS=ALU_umary;EAS_AF=0.4415;EUR_AF=0.4205;MEINFO=AluUndef,26,277,-;NS=2504;SAS_AF=0.4325;SITEPOST=1;SVLEN=251;SVTYPE=ALU;TSD=null\tGT\t1|0\n18\t47694968\tUW_VH_20493\tA\t<CN0>\t100\tPASS\tAC=1812;AF=0.361821;AFR_AF=0.3775;AMR_AF=0.3876;AN=5008;CIEND=0,497;CIPOS=-428,0;CS=DEL_union;EAS_AF=0.3224;END=47698389;EUR_AF=0.327;MC=UW_VH_10297,UW_VH_2166,BI_GS_DEL1_B1_P2641_724,EM_DL_DEL44362,UW_VH_22778,UW_VH_21073,UW_VH_20755,UW_VH_3687,UW_VH_13893,UW_VH_17406,UW_VH_21718,YL_CN_TSI_3770,UW_VH_14603,UW_VH_4778,UW_VH_7825,UW_VH_6135;NS=2504;SAS_AF=0.3988;SVTYPE=DEL\tGT\t0|1\n18\t49444746\tDEL_pindel_47274\tTTTATTTAGTTTGAGTCCACTGAGGACAAACCGAAGGTAATTCTGACGGTTTCATAATTAACTTGATGGACCAGAAAACTGGTTAATTTGGAATCCCGAGTGACTCTATGTCTGAGAATAAGGATTAAATTTAACAGCTGGGACAAAATATGACTAA\tT\t.\tPASS\tAC=956;AF=0.190895;AFR_AF=0.1528;AMR_AF=0.1441;AN=5008;CS=DEL_pindel;EAS_AF=0.4315;END=49444902;EUR_AF=0.0845;NS=2504;SAS_AF=0.137;SITEPOST=1;SVTYPE=DEL\tGT\t1|0\n18\t49931730\tALU_umary_ALU_11703\tT\t<INS:ME:ALU>\t.\t.\tAC=397;AF=0.0792732;AFR_AF=0.0514;AMR_AF=0.0749;AN=5008;CS=ALU_umary;EAS_AF=0.0615;EUR_AF=0.162;MEINFO=AluYa5,2,281,-;NS=2504;SAS_AF=0.0532;SITEPOST=1;SVLEN=279;SVTYPE=ALU;TSD=null\tGT\t1|0\n18\t50462570\tBI_GS_DEL1_B2_P2644_349\tT\t<CN0>\t100\tPASS\tAC=1448;AF=0.289137;AFR_AF=0.2995;AMR_AF=0.2997;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.2173;END=50463032;EUR_AF=0.4473;MC=DEL_pindel_47293,UW_VH_1190;NS=2504;SAS_AF=0.1789;SVTYPE=DEL\tGT\t1|0\n18\t50612385\tBI_GS_DEL1_B4_P2644_147\tT\t<CN0>\t100\tPASS\tAC=2964;AF=0.591853;AFR_AF=0.9039;AMR_AF=0.464;AN=5008;CIEND=-11,11;CIPOS=-11,11;CS=DEL_union;EAS_AF=0.4435;END=50612967;EUR_AF=0.6163;NS=2504;SAS_AF=0.3885;SVTYPE=DEL\tGT\t1|0\n18\t50925977\tDEL_pindel_47302\tCAAAGAAATCAGAGGGGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGGCCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAA\tC\t.\tPASS\tAC=4134;AF=0.825479;AFR_AF=0.7526;AMR_AF=0.8055;AN=5008;CS=DEL_pindel;EAS_AF=0.869;END=50926300;EUR_AF=0.8718;MEINFO=AluYa5a1,1,281,+;NS=2504;SAS_AF=0.8456;SITEPOST=0.9906;SVTYPE=DEL_ALU\tGT\t1|1\n18\t50930750\tDEL_pindel_47303\tAAGCTTAATTTTGCTTCTTCAGGAAAAAAAAAAAAATAGAAGTCTAGCCCATATTAAGAAAT\tA\t.\tPASS\tAC=1354;AF=0.270367;AFR_AF=0.0756;AMR_AF=0.2651;AN=5008;CS=DEL_pindel;EAS_AF=0.4077;END=50930811;EUR_AF=0.2783;NS=2504;SAS_AF=0.3875;SITEPOST=0.9989;SVTYPE=DEL\tGT\t0|1\n18\t51952950\tUW_VH_4750\tG\t<CN0>\t100\tPASS\tAC=3785;AF=0.755791;AFR_AF=0.8729;AMR_AF=0.7392;AN=5008;CIEND=0,481;CIPOS=-446,0;CS=DEL_union;EAS_AF=0.7163;END=51956960;EUR_AF=0.67;MC=BI_GS_DEL1_B1_P2645_846;NS=2504;SAS_AF=0.7382;SVTYPE=DEL\tGT\t1|1\n18\t54706193\tALU_umary_ALU_11724\tC\t<INS:ME:ALU>\t.\t.\tAC=1666;AF=0.332668;AFR_AF=0.2186;AMR_AF=0.3473;AN=5008;CS=ALU_umary;EAS_AF=0.37;EUR_AF=0.3767;MEINFO=AluYb11,1,259,+;NS=2504;SAS_AF=0.3926;SITEPOST=1;SVLEN=258;SVTYPE=ALU;TSD=AAGATAAACATTC\tGT\t1|0\n18\t54946735\tBI_GS_DEL1_B1_P2648_853\tT\t<CN0>\t100\tPASS\tAC=2908;AF=0.580671;AFR_AF=0.3101;AMR_AF=0.6369;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.6339;END=54948718;EUR_AF=0.7475;MC=YL_CN_ITU_3786,UW_VH_1964,YL_CN_ESN_3835,YL_CN_PUR_4616,UW_VH_13722,UW_VH_18012,SI_BD_15894,EM_DL_DEL10468015;NS=2504;SAS_AF=0.68;SVTYPE=DEL\tGT\t1|1\n18\t55671122\tDEL_pindel_47425\tACAAACATTATTATTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC\tA\t.\tPASS\tAC=3546;AF=0.708067;AFR_AF=0.6778;AMR_AF=0.7147;AN=5008;CS=DEL_pindel;EAS_AF=0.7302;END=55671428;EUR_AF=0.7266;MEINFO=AluYa5,1,281,-;NS=2504;SAS_AF=0.7025;SITEPOST=0.9629;SVTYPE=DEL_ALU\tGT\t1|1\n18\t57042133\tDEL_pindel_47454\tCGCCACTGCACTCCAGCCTGGGTGACAGACTGAGATTCGTCTCAAAAAAAAAA\tC\t.\tPASS\tAC=368;AF=0.0734824;AFR_AF=0.1944;AMR_AF=0.036;AN=5008;CS=DEL_pindel;EAS_AF=0;END=57042185;EUR_AF=0.0676;NS=2504;SAS_AF=0.0184;SITEPOST=0.9999;SVTYPE=DEL\tGT\t1|0\n18\t57258178\tDEL_pindel_47461\tTAAAAAGCTGCTAAGTAGGCCGGGCGCGGTGGCTCACGCTTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAAAATTAGCCGGGCGTGATGGTGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGGGGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCACTCCCGCCTGGGCCACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA\tT\t.\tPASS\tAC=2624;AF=0.523962;AFR_AF=0.6558;AMR_AF=0.4741;AN=5008;CS=DEL_pindel;EAS_AF=0.5903;END=57258516;EUR_AF=0.3847;MEINFO=AluYi,1,281,+;NS=2504;SAS_AF=0.456;SITEPOST=0.9946;SVTYPE=DEL_ALU\tGT\t0|1\n18\t57683363\tALU_umary_ALU_11739\tT\t<INS:ME:ALU>\t.\t.\tAC=648;AF=0.129393;AFR_AF=0.1679;AMR_AF=0.1412;AN=5008;CS=ALU_umary;EAS_AF=0.0248;EUR_AF=0.1491;MEINFO=AluUndef,1,279,-;NS=2504;SAS_AF=0.1564;SITEPOST=1;SVLEN=278;SVTYPE=ALU;TSD=GCCAGCCATCTT\tGT\t0|1\n18\t59672757\tUW_VH_1623\tT\t<CN0>\t100\tPASS\tAC=872;AF=0.174121;AFR_AF=0.2716;AMR_AF=0.1369;AN=5008;CIEND=0,513;CIPOS=-435,0;CS=DEL_union;EAS_AF=0.0615;END=59674196;EUR_AF=0.2604;MC=SI_BD_15917,EM_DL_DEL10470201,BI_GS_DEL1_B5_P2653_910,YL_CN_TSI_3779;NS=2504;SAS_AF=0.0961;SVTYPE=DEL\tGT\t1|0\n18\t60686113\tALU_umary_ALU_11760\tA\t<INS:ME:ALU>\t.\t.\tAC=652;AF=0.130192;AFR_AF=0.1967;AMR_AF=0.085;AN=5008;CS=ALU_umary;EAS_AF=0.0764;EUR_AF=0.1302;MEINFO=AluUndef,1,275,+;NS=2504;SAS_AF=0.1278;SITEPOST=1;SVLEN=274;SVTYPE=ALU;TSD=AAGAACAACACATA\tGT\t1|0\n18\t62996845\tDEL_pindel_47576\tAAAACATTAAATCTGAATGGCAATGCTATTTCACATCTTCTGTGGCTTTTCCACAAGTGGTGTGTAATTTATTTAGCTTTCT\tA\t.\tPASS\tAC=1327;AF=0.264976;AFR_AF=0.0961;AMR_AF=0.2536;AN=5008;CS=DEL_pindel;EAS_AF=0.4147;END=62996926;EUR_AF=0.3101;NS=2504;SAS_AF=0.3006;SITEPOST=1;SVTYPE=DEL\tGT\t1|0\n18\t63487287\tALU_umary_ALU_11774\tC\t<INS:ME:ALU>\t.\t.\tAC=3117;AF=0.622404;AFR_AF=0.4788;AMR_AF=0.6571;AN=5008;CS=ALU_umary;EAS_AF=0.7173;EUR_AF=0.7038;MEINFO=AluYc1,1,281,+;NS=2504;SAS_AF=0.6104;SITEPOST=1;SVLEN=280;SVTYPE=ALU;TSD=AAAAAAATCATCTGAGGC\tGT\t1|1\n18\t63533238\tDEL_pindel_47592\tTAAGAATGAAACTATAGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCAAGACTCCGTCTCAAAAAAAAAAAAAAAACAAAAAAAAAAAAAAACAAAAAAAAAAAAAAA\tT\t.\tPASS\tAC=2679;AF=0.534944;AFR_AF=0.4932;AMR_AF=0.5634;AN=5008;CS=DEL_pindel;EAS_AF=0.6002;END=63533582;EUR_AF=0.499;MEINFO=AluYa5,1,281,+;NS=2504;SAS_AF=0.5409;SITEPOST=0.97645;SVTYPE=DEL_ALU\tGT\t1|1\n18\t63723836\tBI_GS_DEL1_B5_P2657_732\tT\t<CN0>\t100\tPASS\tAC=1092;AF=0.218051;AFR_AF=0.121;AMR_AF=0.2392;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.0962;END=63732368;EUR_AF=0.2654;MC=YL_CN_JPT_4045,EM_DL_DEL44934,UW_VH_13877,UW_VH_10927,UW_VH_17385,UW_VH_25237,UW_VH_23289,UW_VH_14708,SI_BD_15936,UW_VH_1196;NS=2504;SAS_AF=0.411;SVTYPE=DEL\tGT\t0|1\n18\t63766845\tUW_VH_10151\tA\t<CN0>\t100\tPASS\tAC=2628;AF=0.52476;AFR_AF=0.7451;AMR_AF=0.4697;AN=5008;CIEND=0,478;CIPOS=-448,0;CS=DEL_union;EAS_AF=0.5635;END=63769201;EUR_AF=0.3469;MC=UW_VH_19359,UW_VH_9260,YL_CN_PUR_4625,UW_VH_2548,UW_VH_5688,BI_GS_DEL1_B1_P2657_618,EM_DL_DEL44938,UW_VH_13468,UW_VH_14540,YL_CN_ACB_4299,YL_CN_CDX_3268,SI_BD_15938,YL_CN_ITU_3797,YL_CN_TSI_3787;NS=2504;SAS_AF=0.409;SVTYPE=DEL\tGT\t1|0\n18\t64542930\tDEL_pindel_47625\tTAACATATTATATTCTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCCGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCATTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC\tT\t.\tPASS\tAC=2085;AF=0.416334;AFR_AF=0.4206;AMR_AF=0.5202;AN=5008;CS=DEL_pindel;EAS_AF=0.4683;END=64543251;EUR_AF=0.333;MEINFO=AluYa5,1,281,-;NS=2504;SAS_AF=0.3691;SITEPOST=0.9944;SVTYPE=DEL_ALU\tGT\t1|0\n18\t66082127\tDEL_pindel_47649\tCGCCTGCCAGAAACTCTCATCTACATTCAGCAGAAAATGCATAAACTATCTCTGG\tC\t.\tPASS\tAC=94;AF=0.01877;AFR_AF=0.0015;AMR_AF=0.0086;AN=5008;CS=DEL_pindel;EAS_AF=0.002;END=66082181;EUR_AF=0.0636;NS=2504;SAS_AF=0.0204;SITEPOST=0.9954;SVTYPE=DEL\tGT\t0|1\n18\t66399175\tALU_umary_ALU_11790\tT\t<INS:ME:ALU>\t.\t.\tAC=1503;AF=0.30012;AFR_AF=0.1316;AMR_AF=0.3141;AN=5008;CS=ALU_umary;EAS_AF=0.3423;EUR_AF=0.4016;MEINFO=AluYa1_1,1,281,-;NS=2504;SAS_AF=0.3701;SITEPOST=1;SVLEN=280;SVTYPE=ALU;TSD=AAAACTGAACACAT\tGT\t0|1\n18\t66572511\tALU_umary_ALU_11795\tA\t<INS:ME:ALU>\t.\t.\tAC=2344;AF=0.468051;AFR_AF=0.4576;AMR_AF=0.4654;AN=5008;CS=ALU_umary;EAS_AF=0.4782;EUR_AF=0.4503;MEINFO=AluUndef,2,260,-;NS=2504;SAS_AF=0.4918;SITEPOST=1;SVLEN=258;SVTYPE=ALU;TSD=GAAATTATATATTTTTTA\tGT\t1|0\n18\t67160066\tALU_umary_ALU_11797\tT\t<INS:ME:ALU>\t.\t.\tAC=967;AF=0.193091;AFR_AF=0.1399;AMR_AF=0.232;AN=5008;CS=ALU_umary;EAS_AF=0.0774;EUR_AF=0.3559;MEINFO=AluUndef,1,281,-;NS=2504;SAS_AF=0.1892;SITEPOST=1;SVLEN=280;SVTYPE=ALU;TSD=TGGTGGGCTTTTTT\tGT\t1|0\n18\t67949598\tDEL_pindel_47697\tTAAGAAATATTGCGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCACGAGGTCAGGAGATCAGATCGAGACCATCCTGGCTAACACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCAGGAGGCGGAGCTTGCAGTGAGCCGAGATCGCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAA\tT\t.\tPASS\tAC=2381;AF=0.475439;AFR_AF=0.6354;AMR_AF=0.3963;AN=5008;CS=DEL_pindel;EAS_AF=0.4306;END=67949923;EUR_AF=0.4264;MEINFO=AluY,1,281,+;NS=2504;SAS_AF=0.4121;SITEPOST=0.9978;SVTYPE=DEL_ALU\tGT\t1|0\n18\t68846724\tDEL_pindel_47716\tTAGAAAAATAGCAAGGTGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA\tT\t.\tPASS\tAC=3272;AF=0.653355;AFR_AF=0.6619;AMR_AF=0.67;AN=5008;CS=DEL_pindel;EAS_AF=0.6766;END=68847058;EUR_AF=0.6521;MEINFO=AluYa5,1,281,+;NS=2504;SAS_AF=0.6074;SITEPOST=0.9811;SVTYPE=DEL_ALU\tGT\t0|1\n18\t70353219\tDEL_pindel_47759\tGAAAAAGCAATTTGTGTTCAACTAAAATGAATCGCTTTTCTCATAAACATTTTATACTAACAGTAACTATATTTTGAAGTGTATCAGTTTCAACACATTTTCCAATATCTGTAGGTACTAAAACCTTAGTCTAATGTTAAATGGAGCTAATTAATGAACAATTCTTAAATACCTACATAATTTCCAACTAAACTAGGAAATTA\tG\t.\tPASS\tAC=897;AF=0.179113;AFR_AF=0.0234;AMR_AF=0.1816;AN=5008;CS=DEL_pindel;EAS_AF=0.2411;END=70353421;EUR_AF=0.2575;NS=2504;SAS_AF=0.2434;SITEPOST=0.9997;SVTYPE=DEL\tGT\t1|0\n18\t71444207\tDEL_pindel_47769\tTAGAAATTGATCCAACACGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGCGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGAGCTCGCACCACTGCAGTCCGCAGTCCGACCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA\tT\t.\tPASS\tAC=1752;AF=0.34984;AFR_AF=0.1286;AMR_AF=0.4899;AN=5008;CS=DEL_pindel;EAS_AF=0.4216;END=71444542;EUR_AF=0.4543;MEINFO=AluYb,1,281,+;NS=2504;SAS_AF=0.3681;SITEPOST=0.9988;SVTYPE=DEL_ALU\tGT\t1|0\n18\t71456838\tDEL_pindel_47772\tTATATATATATATATATATATATATATATATATATATATATATATATATATATATGTATATAA\tT\t.\tPASS\tAC=563;AF=0.11242;AFR_AF=0.0643;AMR_AF=0.0865;AN=5008;CS=DEL_pindel;EAS_AF=0.1052;END=71456900;EUR_AF=0.1769;NS=2504;SAS_AF=0.137;SITEPOST=0.9966;SVTYPE=DEL\tGT\t0|1\n18\t72152428\tDEL_pindel_47785\tTTCCATGATGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCCAGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC\tT\t.\tPASS\tAC=3400;AF=0.678914;AFR_AF=0.6944;AMR_AF=0.6787;AN=5008;CS=DEL_pindel;EAS_AF=0.75;END=72152768;EUR_AF=0.6173;MEINFO=AluYb8,1,281,-;NS=2504;SAS_AF=0.6483;SITEPOST=0.9789;SVTYPE=DEL_ALU\tGT\t1|1\n18\t72779980\tDEL_pindel_47800\tAGAAGATGGCTAAAAGTACGCACAGGGAAGGGGAGCAGGCACTGGTGGATG\tA\t.\tPASS\tAC=1696;AF=0.338658;AFR_AF=0.2231;AMR_AF=0.3314;AN=5008;CS=DEL_pindel;EAS_AF=0.371;END=72780030;EUR_AF=0.4046;NS=2504;SAS_AF=0.3988;SITEPOST=0.995;SVTYPE=DEL\tGT\t0|1\n18\t73570006\tDEL_pindel_47810\tTAAAGAATAACAGTTAGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGAGTGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGCGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCCGGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAA\tT\t.\tPASS\tAC=2043;AF=0.407947;AFR_AF=0.3858;AMR_AF=0.3444;AN=5008;CS=DEL_pindel;EAS_AF=0.3998;END=73570331;EUR_AF=0.4056;MEINFO=AluYb6_2,1,281,+;NS=2504;SAS_AF=0.4939;SITEPOST=0.9985;SVTYPE=DEL_ALU\tGT\t0|1\n18\t73901640\tBI_GS_DEL1_B2_P2667_732\tA\t<CN0>\t100\tPASS\tAC=1234;AF=0.246406;AFR_AF=0.034;AMR_AF=0.3948;AN=5008;CIEND=-1,1;CIPOS=-1,1;CS=DEL_union;EAS_AF=0.371;END=73902034;EUR_AF=0.2097;MC=UW_VH_19595,UW_VH_1626;NS=2504;SAS_AF=0.3374;SVTYPE=DEL\tGT\t1|0\n18\t74347197\tUW_VH_1203\tA\t<CN0>\t100\tPASS\tAC=836;AF=0.166933;AFR_AF=0.0681;AMR_AF=0.1556;AN=5008;CIEND=0,519;CIPOS=-429,0;CS=DEL_union;EAS_AF=0.2589;END=74348009;EUR_AF=0.2296;MC=SI_BD_16012,UW_VH_19746,BI_GS_DEL1_B1_P2668_320;NS=2504;SAS_AF=0.1493;SVTYPE=DEL\tGT\t0|1\n18\t74365364\tDEL_pindel_47837\tGCTCTGATCTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGC\tG\t.\tPASS\tAC=1099;AF=0.219449;AFR_AF=0.1838;AMR_AF=0.2536;AN=5008;CS=DEL_pindel;EAS_AF=0.2679;END=74365670;EUR_AF=0.2694;MEINFO=AluYa5,2,281,-;NS=2504;SAS_AF=0.1421;SITEPOST=0.9998;SVTYPE=DEL_ALU\tGT\t0|1\n18\t74638701\tALU_umary_ALU_11840\tT\t<INS:ME:ALU>\t.\t.\tAC=2181;AF=0.435503;AFR_AF=0.4259;AMR_AF=0.3977;AN=5008;CS=ALU_umary;EAS_AF=0.4573;EUR_AF=0.4583;MEINFO=AluUndef,8,241,-;NS=2504;SAS_AF=0.4294;SITEPOST=1;SVLEN=233;SVTYPE=ALU;TSD=null\tGT\t1|0\n18\t74769770\tDEL_pindel_47841\tGGCGGGGAGTGTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTTGCCCAGGCTGGAGTGCAGTGGTGCGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTTTTTTTAATAGAGACGGGGTTTCACCGTGTTAGCCAGGATGGTGTCGATCTCCTGACCTCGTGTTCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGA\tG\t.\tPASS\tAC=2978;AF=0.594649;AFR_AF=0.6725;AMR_AF=0.536;AN=5008;CS=DEL_pindel;EAS_AF=0.62;END=74770071;EUR_AF=0.5278;MEINFO=AluYa,17,281,-;NS=2504;SAS_AF=0.5736;SITEPOST=0.984;SVTYPE=DEL_ALU\tGT\t0|1\n18\t75266983\tUW_VH_3430\tA\t<CN0>\t100\tPASS\tAC=2868;AF=0.572684;AFR_AF=0.2769;AMR_AF=0.5173;AN=5008;CIEND=0,416;CIPOS=-476,0;CS=DEL_union;EAS_AF=0.881;END=75268167;EUR_AF=0.6213;MC=YL_CN_GWD_5147,EM_DL_DEL10476846,SI_BD_16025;NS=2504;SAS_AF=0.6442;SVTYPE=DEL\tGT\t0|1\n18\t75267029\tBI_GS_DEL1_B4_P2669_58\tA\t<CN0>\t100\tPASS\tAC=2860;AF=0.571086;AFR_AF=0.2761;AMR_AF=0.5173;AN=5008;CIEND=-26,26;CIPOS=-26,26;CS=DEL_union;EAS_AF=0.879;END=75267561;EUR_AF=0.6183;NS=2504;SAS_AF=0.6421;SVTYPE=DEL\tGT\t0|1\n18\t76662372\tUW_VH_19078\tC\t<CN0>\t100\tPASS\tAC=120;AF=0.0239617;AFR_AF=0.0015;AMR_AF=0.0562;AN=5008;CIEND=0,129;CIPOS=-204,0;CS=DEL_union;EAS_AF=0.0099;END=76666356;EUR_AF=0.0527;MC=YL_CN_IBS_3480,BI_GS_DEL1_B3_P2670_40,UW_VH_45;NS=2504;SAS_AF=0.0164;SVTYPE=DEL\tGT\t0|1\n18\t76664254\tEM_DL_DEL10478364\tC\t<CN0>\t100\tPASS\tAC=107;AF=0.0213658;AFR_AF=0.0045;AMR_AF=0.0476;AN=5008;CIEND=-150,150;CIPOS=-150,150;CS=DEL_union;EAS_AF=0.0089;END=76665058;EUR_AF=0.0447;NS=2504;SAS_AF=0.0143;SVTYPE=DEL\tGT\t0|1\n18\t77309946\tBI_GS_DEL1_B1_P2671_226\tC\t<CN0>\t100\tPASS\tAC=2706;AF=0.540335;AFR_AF=0.2995;AMR_AF=0.5403;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.6716;END=77312089;EUR_AF=0.6392;NS=2504;SAS_AF=0.6288;SVTYPE=DEL\tGT\t1|0\n19\t393559\tYL_CN_TSI_3819\tG\t<CN0>\t100\tPASS\tAC=3319;AF=0.66274;AFR_AF=0.7746;AMR_AF=0.6138;AN=5008;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0.6984;END=395010;EUR_AF=0.5278;NS=2504;SAS_AF=0.6483;SVTYPE=DEL\tGT\t0|1\n19\t565965\tEM_DL_DEL45232\tC\t<CN0>\t100\tPASS\tAC=1099;AF=0.219449;AFR_AF=0.2428;AMR_AF=0.111;AN=5008;CIEND=-150,150;CIPOS=-150,150;CS=DEL_union;EAS_AF=0.1935;END=568163;EUR_AF=0.162;NS=2504;SAS_AF=0.3507;SVTYPE=DEL\tGT\t0|1\n19\t566005\tYL_CN_GIH_2967\tT\t<CN0>\t100\tPASS\tAC=1099;AF=0.219449;AFR_AF=0.2428;AMR_AF=0.111;AN=5008;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0.1935;END=569470;EUR_AF=0.162;MC=BI_GS_DEL1_B2_P2673_193,SI_BD_16105,UW_VH_46;NS=2504;SAS_AF=0.3507;SVTYPE=DEL\tGT\t0|1\n19\t2909164\tYL_CN_BEB_3216\tA\t<CN0>\t100\tPASS\tAC=3826;AF=0.763978;AFR_AF=0.6467;AMR_AF=0.8415;AN=5008;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0.7173;END=2910884;EUR_AF=0.8807;MC=YL_CN_CHS_4100,YL_CN_PUR_4779,BI_GS_DEL1_B2_P2675_564,YL_CN_PEL_3640,YL_CN_ACB_4379,YL_CN_KHV_4164,YL_CN_STU_3921,YL_CN_ITU_3893,YL_CN_TSI_3837,YL_CN_CEU_4810,YL_CN_ASW_3980,YL_CN_CHB_3925,YL_CN_FIN_3692,SI_BD_16155,YL_CN_PJL_4135,YL_CN_JPT_4135,YL_CN_CDX_3327;NS=2504;SAS_AF=0.7955;SVTYPE=DEL\tGT\t1|1\n19\t2909363\tEM_DL_DEL10483187\tC\t<CN0>\t100\tPASS\tAC=3824;AF=0.763578;AFR_AF=0.6467;AMR_AF=0.8415;AN=5008;CIEND=-150,150;CIPOS=-150,150;CS=DEL_union;EAS_AF=0.7173;END=2910540;EUR_AF=0.8807;MC=BI_GS_DEL1_B2_P2675_564,YL_CN_CHB_3925;NS=2504;SAS_AF=0.7935;SVTYPE=DEL\tGT\t1|1\n19\t3711008\tSI_BD_16171\tA\t<CN0>\t100\tPASS\tAC=3879;AF=0.774561;AFR_AF=0.6399;AMR_AF=0.7896;AN=5008;CIEND=-50,185;CIPOS=-185,50;CS=DEL_union;EAS_AF=0.9931;END=3711333;EUR_AF=0.6899;MC=BI_GS_DEL1_B2_P2676_428;NS=2504;SAS_AF=0.8078;SVTYPE=DEL\tGT\t1|1\n19\t3715862\tBI_GS_DEL1_B2_P2676_430\tT\t<CN0>\t100\tPASS\tAC=260;AF=0.0519169;AFR_AF=0.0023;AMR_AF=0.0764;AN=5008;CIEND=-62,62;CIPOS=-62,62;CS=DEL_union;EAS_AF=0.0119;END=3717189;EUR_AF=0.0905;MC=UW_VH_1627;NS=2504;SAS_AF=0.1033;SVTYPE=DEL\tGT\t1|0\n19\t4217790\tDUP_gs_CNV_19_4217790_4224498\tG\t<CN0>,<CN2>,<CN3>\t.\tPASS\tAC=0,2,40;AF=0,0.00039936,0.00798722;AFR_AF=0,0,0.0015;AMR_AF=0,0.0014,0.013;AN=5008;CS=DUP_gs;EAS_AF=0,0,0;END=4224498;EUR_AF=0,0.001,0.0219;NS=2504;SAS_AF=0,0,0.0072;SITEPOST=0.9983;SVTYPE=CNV\tGT\t0|3\n19\t5509856\tUW_VH_1205\tC\t<CN0>\t100\tPASS\tAC=1544;AF=0.308307;AFR_AF=0.0968;AMR_AF=0.2061;AN=5008;CIEND=0,592;CIPOS=-464,0;CS=DEL_union;EAS_AF=0.4841;END=5510792;EUR_AF=0.337;MC=UW_VH_5109,UW_VH_3231,UW_VH_6070,UW_VH_13514,EM_DL_DEL10484837,BI_GS_DEL1_B2_P2678_330,YL_CN_PJL_4196;NS=2504;SAS_AF=0.456;SVTYPE=DEL\tGT\t0|1\n19\t12539909\tDEL_pindel_48277\tCAACAACATGCCTATAAGCACCACAAGATTTTTTTTTTTAATGAAGCAAAGGAAAAGAAGAACTAGCTTCCTATAGCTAAGCATCTGCAAATAAGACGGAACATTCAATGGTTTTTTCAGTAGGCAAAGGTGAAAAAGAGGTACGATCCTCAAAGATCCTACAGTGGAACAAAGCTTTCAATCCACCTGAGA\tC\t.\tPASS\tAC=1118;AF=0.223243;AFR_AF=0.2693;AMR_AF=0.1844;AN=5008;CS=DEL_pindel;EAS_AF=0.2063;END=12540100;EUR_AF=0.1561;NS=2504;SAS_AF=0.2751;SITEPOST=0.9992;SVTYPE=DEL\tGT\t0|1\n19\t12556643\tBI_GS_DEL1_B4_P2685_68\tC\t<CN0>\t100\tPASS\tAC=1406;AF=0.280751;AFR_AF=0.2436;AMR_AF=0.4308;AN=5008;CIEND=-12,13;CIPOS=-12,13;CS=DEL_union;EAS_AF=0.1071;END=12558236;EUR_AF=0.497;MC=YL_CN_BEB_3247,YL_CN_YRI_4926,UW_VH_1208,UW_VH_12145,YL_CN_FIN_3736,YL_CN_IBS_3584,YL_CN_ASW_4017,SI_BD_16311,YL_CN_GWD_5212,UW_VH_12879;NS=2504;SAS_AF=0.181;SVTYPE=DEL\tGT\t1|0\n19\t12694867\tBI_GS_DEL1_B4_P2685_96\tG\t<CN0>\t100\tPASS\tAC=2164;AF=0.432109;AFR_AF=0.3865;AMR_AF=0.5476;AN=5008;CIEND=0,1;CIPOS=0,1;CS=DEL_union;EAS_AF=0.1756;END=12698924;EUR_AF=0.6938;MC=EM_DL_DEL46077,UW_VH_1209,UW_VH_3043,UW_VH_5328,UW_VH_4500,YL_CN_CHS_4160,UW_VH_10472,SI_BD_16317;NS=2504;SAS_AF=0.407;SVTYPE=DEL\tGT\t1|1\n19\t15046391\tBI_GS_DEL1_B1_P2688_43\tA\t<CN0>\t100\tPASS\tAC=2662;AF=0.53155;AFR_AF=0.4614;AMR_AF=0.5519;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.5367;END=15049476;EUR_AF=0.505;MC=UW_VH_21175,EM_DL_DEL46227,UW_VH_1630,UW_VH_25145,YL_CN_ACB_4459,UW_VH_12368;NS=2504;SAS_AF=0.6339;SVTYPE=DEL\tGT\t1|1\n19\t15927952\tALU_umary_ALU_11883\tA\t<INS:ME:ALU>\t.\t.\tAC=2178;AF=0.434904;AFR_AF=0.4773;AMR_AF=0.415;AN=5008;CS=ALU_umary;EAS_AF=0.4921;EUR_AF=0.3827;MEINFO=AluYa5,1,276,+;NS=2504;SAS_AF=0.3865;SITEPOST=1;SVLEN=275;SVTYPE=ALU;TSD=AAAAGAATGGAAAAGGA\tGT\t1|1\n19\t18566051\tBI_GS_DEL1_B1_P2691_299\tC\t<CN0>\t100\tPASS\tAC=18;AF=0.00359425;AFR_AF=0.0015;AMR_AF=0.0043;AN=5008;CIEND=-1,2;CIPOS=-1,2;CS=DEL_union;EAS_AF=0;END=18566665;EUR_AF=0.007;NS=2504;SAS_AF=0.0061;SVTYPE=DEL\tGT\t0|1\n19\t21752923\tDUP_gs_CNV_19_21752923_21756703\tT\t<CN2>,<CN3>\t.\tPASS\tAC=1773,1;AF=0.354034,0.00019968;AFR_AF=0.3328,0;AMR_AF=0.4006,0;AN=5008;CS=DUP_gs;EAS_AF=0.4137,0.001;END=21756703;EUR_AF=0.333,0;NS=2504;SAS_AF=0.3098,0;SITEPOST=1;SVTYPE=CNV\tGT\t0|1\n19\t23320788\tDEL_pindel_48512\tTGAAAATGGCTTTCACGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTGGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAA\tT\t.\tPASS\tAC=2720;AF=0.543131;AFR_AF=0.4274;AMR_AF=0.6095;AN=5008;CS=DEL_pindel;EAS_AF=0.6141;END=23321105;EUR_AF=0.5537;MEINFO=AluYa4_3,1,281,+;NS=2504;SAS_AF=0.5685;SITEPOST=0.9905;SVTYPE=DEL_ALU\tGT\t1|0\n19\t24011300\tSVA_umary_SVA_746\tT\t<INS:ME:SVA>\t.\t.\tAC=3850;AF=0.76877;AFR_AF=0.6959;AMR_AF=0.7608;AN=5008;CS=SVA_umary;EAS_AF=0.8353;EUR_AF=0.8141;MEINFO=SVA,288,1588,+;NS=2504;SAS_AF=0.7577;SITEPOST=0.9999;SVLEN=1300;SVTYPE=SVA;TSD=AAGTATTTCAACCTT\tGT\t1|1\n19\t27961358\tEM_DL_DEL10494078\tA\t<CN0>\t100\tPASS\tAC=3888;AF=0.776358;AFR_AF=0.7186;AMR_AF=0.8156;AN=5008;CIEND=-150,150;CIPOS=-150,150;CS=DEL_union;EAS_AF=0.9365;END=27963241;EUR_AF=0.828;MC=YL_CN_STU_4064,YL_CN_GBR_3966,BI_GS_DEL1_B2_P2700_20,YL_CN_ESN_3956,YL_CN_GIH_3048,YL_CN_LWK_3739,YL_CN_CHB_4073;NS=2504;SAS_AF=0.6084;SVTYPE=DEL\tGT\t1|1\n19\t31287472\tEM_DL_DEL48080\tA\t<CN0>\t100\tPASS\tAC=2654;AF=0.529952;AFR_AF=0.4992;AMR_AF=0.5821;AN=5008;CIEND=-150,150;CIPOS=-150,150;CS=DEL_union;EAS_AF=0.5317;END=31289746;EUR_AF=0.5378;MC=UW_VH_4877,UW_VH_6649,BI_GS_DEL1_B5_P2704_371,UW_VH_3183,UW_VH_18298,UW_VH_21094,UW_VH_18079,UW_VH_14517,UW_VH_11513,UW_VH_1215,YL_CN_CDX_3408,UW_VH_20649,UW_VH_14611,UW_VH_3899,UW_VH_7827,UW_VH_20442,UW_VH_15559,UW_VH_19521;NS=2504;SAS_AF=0.5245;SVTYPE=DEL\tGT\t1|0\n19\t31690684\tALU_umary_ALU_11924\tA\t<INS:ME:ALU>\t.\t.\tAC=2047;AF=0.408746;AFR_AF=0.4788;AMR_AF=0.415;AN=5008;CS=ALU_umary;EAS_AF=0.3462;EUR_AF=0.3698;MEINFO=AluYb6_2,1,275,+;NS=2504;SAS_AF=0.4141;SITEPOST=1;SVLEN=274;SVTYPE=ALU;TSD=AGAGAATTAAATGA\tGT\t1|0\n19\t35851718\tDUP_gs_CNV_19_35851718_35863310\tA\t<CN0>,<CN2>\t.\tPASS\tAC=631,14;AF=0.125998,0.00279553;AFR_AF=0.0136,0.0015;AMR_AF=0.1196,0.0043;AN=5008;CS=DUP_gs;EAS_AF=0.2014,0.006;END=35863310;EUR_AF=0.2425,0.001;MC=YL_CN_ASW_4087;NS=2504;SAS_AF=0.0849,0.002;SITEPOST=1;SVTYPE=CNV\tGT\t0|1\n19\t36662694\tUW_VH_24943\tG\t<CN0>\t100\tPASS\tAC=3059;AF=0.610823;AFR_AF=0.7897;AMR_AF=0.6239;AN=5008;CIEND=0,204;CIPOS=-354,0;CS=DEL_union;EAS_AF=0.6042;END=36662964;EUR_AF=0.5189;NS=2504;SAS_AF=0.4611;SVTYPE=DEL\tGT\t1|1\n19\t37046181\tDEL_pindel_48688\tAGCGATAAAGTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCCGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCCAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTGTATTTTTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC\tA\t.\tPASS\tAC=2533;AF=0.505791;AFR_AF=0.6316;AMR_AF=0.4049;AN=5008;CS=DEL_pindel;EAS_AF=0.376;END=37046497;EUR_AF=0.506;MEINFO=AluYb6_2,1,281,-;NS=2504;SAS_AF=0.5409;SITEPOST=0.9962;SVTYPE=DEL_ALU\tGT\t1|0\n19\t37284317\tDEL_pindel_48692\tTAAAAAGAGTAACTTTGGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGAGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCCAGGGGGCGGAGCCTGCAGTGAGCCGAGATTGCGCCACTGCACTCCAGCCTGGGCGACAGCGAGACTCCGTCTCAAAAAAAAAAAAAA\tT\t.\tPASS\tAC=3164;AF=0.631789;AFR_AF=0.6778;AMR_AF=0.6398;AN=5008;CS=DEL_pindel;EAS_AF=0.4871;END=37284627;EUR_AF=0.6809;MEINFO=AluYe,1,281,+;NS=2504;SAS_AF=0.6626;SITEPOST=0.9617;SVTYPE=DEL_ALU\tGT\t1|1\n19\t37463442\tDEL_pindel_48697\tGAGCAGAAATTAGTGACTTAAATGTTGAGATGCCAGAAGACCTGGACTGGGGCATGAATTCCCAGCCCA\tG\t.\tPASS\tAC=861;AF=0.171925;AFR_AF=0.264;AMR_AF=0.1311;AN=5008;CS=DEL_pindel;EAS_AF=0.125;END=37463510;EUR_AF=0.1322;NS=2504;SAS_AF=0.1656;SITEPOST=0.9981;SVTYPE=DEL\tGT\t1|0\n19\t38341368\tUW_VH_25362\tC\t<CN0>\t100\tPASS\tAC=144;AF=0.028754;AFR_AF=0.003;AMR_AF=0.0432;AN=5008;CIEND=0,75;CIPOS=-38,0;CS=DEL_union;EAS_AF=0;END=38345669;EUR_AF=0.0895;MC=BI_GS_DEL1_B1_P2711_250,EM_DL_DEL48358,SI_BD_16526,YL_CN_PUR_5018,UW_VH_3749;NS=2504;SAS_AF=0.0204;SVTYPE=DEL\tGT\t1|0\n19\t45444699\tL1_umary_LINE1_2883\tT\t<INS:ME:LINE1>\t.\t.\tAC=1146;AF=0.228834;AFR_AF=0.1831;AMR_AF=0.232;AN=5008;CS=L1_umary;EAS_AF=0.3383;EUR_AF=0.2117;MEINFO=LINE1,5465,6019,-;NS=2504;SAS_AF=0.1933;SITEPOST=1;SVLEN=554;SVTYPE=LINE1;TSD=TTT\tGT\t1|0\n19\t45473128\tUW_VH_22751\tA\t<CN0>\t100\tPASS\tAC=473;AF=0.0944489;AFR_AF=0.2262;AMR_AF=0.0447;AN=5008;CIEND=0,322;CIPOS=-294,0;CS=DEL_union;EAS_AF=0.0268;END=45474248;EUR_AF=0.0398;MC=UW_VH_4069,SI_BD_16591,BI_GS_DEL1_B4_P2718_69;NS=2504;SAS_AF=0.0777;SVTYPE=DEL\tGT\t1|0\n19\t46278623\tBI_GS_DEL1_B2_P2719_138\tC\t<CN0>\t100\tPASS\tAC=2590;AF=0.517173;AFR_AF=0.3396;AMR_AF=0.6398;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.629;END=46279603;EUR_AF=0.4672;MC=UW_VH_8828,YL_CN_PUR_5076,SI_BD_16599;NS=2504;SAS_AF=0.6063;SVTYPE=DEL\tGT\t0|1\n19\t47528255\tBI_GS_DEL1_B1_P2720_346\tA\t<CN0>\t100\tPASS\tAC=1266;AF=0.252796;AFR_AF=0.034;AMR_AF=0.4539;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.4226;END=47528724;EUR_AF=0.2773;NS=2504;SAS_AF=0.2055;SVTYPE=DEL\tGT\t1|1\n19\t51406745\tSI_BD_16673\tC\t<CN0>\t100\tPASS\tAC=1419;AF=0.283347;AFR_AF=0.2088;AMR_AF=0.4193;AN=5008;CIEND=-50,272;CIPOS=-272,112;CS=DEL_union;EAS_AF=0.0575;END=51408334;EUR_AF=0.4861;MC=YL_CN_STU_4167,YL_CN_GBR_4033,YL_CN_PUR_5136,YL_CN_LWK_3791,UW_VH_1222,EM_DL_DEL10504134,YL_CN_IBS_3685,BI_GS_DEL1_B1_P2724_261,YL_CN_BEB_3335;NS=2504;SAS_AF=0.3119;SVTYPE=DEL\tGT\t1|1\n19\t51776390\tDEL_pindel_49094\tTAAGAATTACCACAACTTGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAA\tT\t.\tPASS\tAC=973;AF=0.194289;AFR_AF=0.357;AMR_AF=0.1643;AN=5008;CS=DEL_pindel;EAS_AF=0.0774;END=51776701;EUR_AF=0.2425;MEINFO=AluYa5,1,281,+;NS=2504;SAS_AF=0.0665;SITEPOST=0.9996;SVTYPE=DEL_ALU\tGT\t1|0\n19\t52134835\tDUP_gs_CNV_19_52134835_52149093\tT\t<CN0>,<CN2>\t.\tPASS\tAC=1664,183;AF=0.332268,0.0365415;AFR_AF=0.2821,0.0431;AMR_AF=0.1671,0.0375;AN=5008;CS=DUP_gs;EAS_AF=0.6498,0.0327;END=52149093;EUR_AF=0.1928,0.0179;MC=UW_VH_24562,UW_VH_21978,YL_CN_ACB_4596;NS=2504;SAS_AF=0.3333,0.0501;SITEPOST=1;SVTYPE=CNV\tGT\t1|0\n19\t52948969\tDEL_pindel_49122\tAATTTACTCTTGCAGTCATTCTGGAGCAAAAATTCATGATGCAGGACTCCACACACTACTGTCCATCTGAGTGGAAGCTGCAAGTTAGTCCTGCCCTGCCATCTGCC\tA\t.\tPASS\tAC=4165;AF=0.831669;AFR_AF=0.8517;AMR_AF=0.9049;AN=5008;CS=DEL_pindel;EAS_AF=0.6548;END=52949075;EUR_AF=0.9553;NS=2504;SAS_AF=0.8078;SITEPOST=1;SVTYPE=DEL\tGT\t1|1\n19\t53096015\tBI_GS_DEL1_B1_P2726_60\tG\t<CN0>\t100\tPASS\tAC=2085;AF=0.416334;AFR_AF=0.4713;AMR_AF=0.4784;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.2728;END=53097618;EUR_AF=0.4165;MC=SI_BD_16684,YL_CN_CEU_4972,UW_VH_1223;NS=2504;SAS_AF=0.4458;SVTYPE=DEL\tGT\t0|1\n19\t53422195\tSI_BD_16689\tT\t<CN0>\t100\tPASS\tAC=3281;AF=0.655152;AFR_AF=0.587;AMR_AF=0.8012;AN=5008;CIEND=-50,318;CIPOS=-318,87;CS=DEL_union;EAS_AF=0.5446;END=53424196;EUR_AF=0.7624;MC=YL_CN_MXL_3388,YL_CN_GBR_4037,YL_CN_ACB_4606,YL_CN_STU_4177,YL_CN_GIH_3100,YL_CN_PUR_5146,YL_CN_TSI_3961,YL_CN_GWD_5343,YL_CN_JPT_4297,YL_CN_CHB_4171,YL_CN_MSL_3671,YL_CN_ITU_4242,YL_CN_BEB_3340,YL_CN_CHS_4283,BI_GS_DEL1_B1_P2726_282,YL_CN_ASW_4136,YL_CN_CEU_4974,YL_CN_ESN_4017,YL_CN_CDX_3465,YL_CN_LWK_3799,UW_VH_3230,YL_CN_KHV_4533,YL_CN_PJL_4556,UW_VH_3640,YL_CN_YRI_5081,YL_CN_IBS_3696;NS=2504;SAS_AF=0.6472;SVTYPE=DEL\tGT\t1|1\n19\t54555536\tBI_GS_DEL1_B4_P2727_67\tC\t<CN0>\t100\tPASS\tAC=1007;AF=0.201078;AFR_AF=0.205;AMR_AF=0.2291;AN=5008;CIEND=0,1;CIPOS=0,1;CS=DEL_union;EAS_AF=0.1111;END=54560655;EUR_AF=0.2346;MC=EM_DL_DEL49479,UW_VH_18339,UW_VH_1641,YL_CN_CDX_3475,UW_VH_5329,SI_BD_16709;NS=2504;SAS_AF=0.2342;SVTYPE=DEL\tGT\t0|1\n19\t55194225\tDEL_pindel_49197\tATCTTCTAAGCTAAGCTAAGAAGATAGCTAAGCTTCTTCTAAGCTAAGCTAAGAAGATAGCTAAGCT\tA\t.\tPASS\tAC=777;AF=0.155152;AFR_AF=0.1089;AMR_AF=0.1513;AN=5008;CS=DEL_pindel;EAS_AF=0.1468;END=55194291;EUR_AF=0.1849;NS=2504;SAS_AF=0.1984;SITEPOST=0.999;SVTYPE=DEL\tGT\t1|0\n19\t55266365\tDUP_gs_CNV_19_55266365_55280663\tC\t<CN0>,<CN2>\t.\tPASS\tAC=735,35;AF=0.146765,0.00698882;AFR_AF=0.1354,0.0038;AMR_AF=0.1772,0.0058;AN=5008;CS=DUP_gs;EAS_AF=0.0903,0.003;END=55280663;EUR_AF=0.1551,0.008;MC=EM_DL_DEL49516;NS=2504;SAS_AF=0.1902,0.0153;SITEPOST=1;SVTYPE=CNV\tGT\t1|1\n19\t56041811\tDEL_pindel_49223\tAGGCCTAGTGTGACCTGTGAGGCCTGCGGGTTTAGTGTGGCCTAGGGTGACCCCGTGAGGCCTAGTGTGACCTGTGAGGCCTGTGGGTTTAGTGGGGCCTAGTGTGACCTGTGAGGCCTGTGGGTTTAGTGTGGCTTAGTGTGACCCGTGAGGCCTGTGGGTTTAGTGTGGCCTAGTGTGACCCGTGAGGCCTGTGGGTTTAGTGTGGCCTAGGGTGACCCCGTGAGGCCTAGTGTGACCTGTGAGGCCTGTGGGTTTAGTGGGGCCTAGTGTGACCTGTGAGGCCTGTGGGTTTAGTGTGGCTTAGTGTGACCCGTGAGGCCTGTGGGTTTAGTGT\tA\t.\tPASS\tAC=2273;AF=0.453874;AFR_AF=0.3759;AMR_AF=0.4827;AN=5008;CS=DEL_pindel;EAS_AF=0.4464;END=56042147;EUR_AF=0.497;NS=2504;SAS_AF=0.502;SITEPOST=0.99;SVTYPE=DEL\tGT\t0|1\n19\t56580958\tDEL_pindel_49250\tTGATACAGGGTAAAAACAAGCATAGGTCTATTGTAACTGCTCAGCTCTGCC\tT\t.\tPASS\tAC=1456;AF=0.290735;AFR_AF=0.4077;AMR_AF=0.33;AN=5008;CS=DEL_pindel;EAS_AF=0.247;END=56581008;EUR_AF=0.2485;NS=2504;SAS_AF=0.1933;SITEPOST=0.9994;SVTYPE=DEL\tGT\t1|0\n19\t56966061\tALU_umary_ALU_11995\tC\t<INS:ME:ALU>\t.\t.\tAC=1135;AF=0.226637;AFR_AF=0.1929;AMR_AF=0.2378;AN=5008;CS=ALU_umary;EAS_AF=0.0992;EUR_AF=0.3539;MEINFO=AluYa4_3,1,281,-;NS=2504;SAS_AF=0.2648;SITEPOST=1;SVLEN=280;SVTYPE=ALU;TSD=AAAAATCAAATAAAAATGGATTAAAGAC\tGT\t1|1\n19\t57425532\tALU_umary_ALU_11999\tG\t<INS:ME:ALU>\t.\t.\tAC=1070;AF=0.213658;AFR_AF=0.295;AMR_AF=0.1988;AN=5008;CS=ALU_umary;EAS_AF=0.1419;EUR_AF=0.2028;MEINFO=AluUndef,1,280,-;NS=2504;SAS_AF=0.1994;SITEPOST=1;SVLEN=279;SVTYPE=ALU;TSD=AAAAGTCTTCATCCTCG\tGT\t1|1\n19\t57474871\tSI_BD_16750\tG\t<CN0>\t100\tPASS\tAC=2841;AF=0.567292;AFR_AF=0.3926;AMR_AF=0.5115;AN=5008;CIEND=-50,294;CIPOS=-294,105;CS=DEL_union;EAS_AF=0.7292;END=57475609;EUR_AF=0.5179;MC=DEL_pindel_49276;NS=2504;SAS_AF=0.727;SVTYPE=DEL\tGT\t1|0\n20\t594427\tDEL_pindel_49336\tTGTGTGCTGAGTCCAGCTCAAGTCCCTTGGTTCCCACTGCTGCTAAGCATGCACG\tT\t.\tPASS\tAC=1386;AF=0.276757;AFR_AF=0.3162;AMR_AF=0.2939;AN=5008;CS=DEL_pindel;EAS_AF=0.1647;END=594481;EUR_AF=0.3509;NS=2504;SAS_AF=0.2505;SITEPOST=0.9999;SVTYPE=DEL\tGT\t1|1\n20\t1389096\tUW_VH_3735\tG\t<CN0>\t100\tPASS\tAC=2647;AF=0.528554;AFR_AF=0.2685;AMR_AF=0.5922;AN=5008;CIEND=0,478;CIPOS=-443,0;CS=DEL_union;EAS_AF=0.7996;END=1390815;EUR_AF=0.5;MC=YL_CN_MSL_3707,YL_CN_BEB_3376,EM_DL_DEL10609080,YL_CN_ITU_4292,YL_CN_CLM_3524;NS=2504;SAS_AF=0.5849;SVTYPE=DEL\tGT\t1|1\n20\t1546228\tALU_umary_ALU_12014\tG\t<INS:ME:ALU>\t.\t.\tAC=2031;AF=0.405551;AFR_AF=0.4637;AMR_AF=0.2882;AN=5008;CS=ALU_umary;EAS_AF=0.5615;EUR_AF=0.2475;MEINFO=AluUndef,1,281,+;NS=2504;SAS_AF=0.4121;SITEPOST=1;SVLEN=280;SVTYPE=ALU;TSD=AAGAAATGTTTCCTG\tGT\t0|1\n20\t1560739\tYL_CN_CHB_4219\tT\t<CN0>\t100\tPASS\tAC=4099;AF=0.81849;AFR_AF=0.9213;AMR_AF=0.6527;AN=5008;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0.7867;END=1593685;EUR_AF=0.7903;MC=UW_VH_14699,EM_DL_DEL57492,YL_CN_KHV_4589,UW_VH_14908,UW_VH_15575,BI_GS_DEL1_B1_P2734_555,UW_VH_5111,UW_VH_20808,UW_VH_13272,UW_VH_18673,UW_VH_5581,SI_BD_16781,UW_VH_21462,UW_VH_2780,UW_VH_25292,UW_VH_15103;NS=2504;SAS_AF=0.8589;SVTYPE=DEL\tGT\t1|1\n20\t1589901\tBI_GS_CNV_20_1589901_1593853\tC\t<CN0>\t100\tPASS\tAC=3791;AF=0.756989;AFR_AF=0.8691;AMR_AF=0.5879;AN=5008;CIEND=0,500;CIPOS=-500,0;CS=DEL_union;EAS_AF=0.7837;END=1593853;EUR_AF=0.6491;NS=2504;SAS_AF=0.8088;SVTYPE=DEL\tGT\t1|1\n20\t2359923\tSI_BD_16789\tA\t<CN0>\t100\tPASS\tAC=1633;AF=0.326078;AFR_AF=0.3253;AMR_AF=0.3401;AN=5008;CIEND=-50,50;CIPOS=-50,50;CS=DEL_union;EAS_AF=0.2986;END=2360518;EUR_AF=0.3986;NS=2504;SAS_AF=0.271;SVTYPE=DEL\tGT\t0|1\n20\t3037866\tDEL_pindel_49423\tCAAAAATCAGCTGGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAAGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAA\tC\t.\tPASS\tAC=3348;AF=0.66853;AFR_AF=0.7088;AMR_AF=0.6138;AN=5008;CS=DEL_pindel;EAS_AF=0.6806;END=3038182;EUR_AF=0.6292;MEINFO=AluYa5,5,281,+;NS=2504;SAS_AF=0.681;SITEPOST=0.94275;SVTYPE=DEL_ALU\tGT\t0|1\n20\t4082846\tSVA_umary_SVA_777\tA\t<INS:ME:SVA>\t.\t.\tAC=1448;AF=0.289137;AFR_AF=0.1036;AMR_AF=0.3646;AN=5008;CS=SVA_umary;EAS_AF=0.2907;EUR_AF=0.4404;MEINFO=SVA,1232,1625,+;NS=2504;SAS_AF=0.3292;SITEPOST=1;SVLEN=393;SVTYPE=SVA;TSD=AAGAAAATACAAATCA\tGT\t1|0\n20\t5268423\tSVA_umary_SVA_779\tT\t<INS:ME:SVA>\t.\t.\tAC=1888;AF=0.376997;AFR_AF=0.3495;AMR_AF=0.3156;AN=5008;CS=SVA_umary;EAS_AF=0.4762;EUR_AF=0.3708;MEINFO=SVA,79,1627,-;NS=2504;SAS_AF=0.362;SITEPOST=1;SVLEN=1548;SVTYPE=SVA;TSD=GACACTGGATTCTT\tGT\t0|1\n20\t5534545\tDEL_pindel_49491\tAGCTGCAGTTAAGGTATCCAGAAGGTCTTGCTAAGATCACTTAACAAAGTGGCTACATTGAACAACAGATTTTCTTTTCTTTTTTTTTAAGACAGAGTCTCGCTCTGTCACCCAGGCTGCAGTGCAGTGGTGTGATCTCTGCTCACTGCAAGCTCCGACTCCTCGGTTCAGGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCACGCCCGGCTAATTATTATTATTATTATTATTTTGTATTTTTAGTAGAGACGGGTTTTCACCGTGTTAGCCAGGATGGTCTCCATCTCCTGACCTTGTGATCCGCTCACCTCGGCCTCCCAGAGTGCTGGGATTACAGGCGTGAGCCATCAG\tA\t.\tPASS\tAC=1402;AF=0.279952;AFR_AF=0.3321;AMR_AF=0.2046;AN=5008;CS=DEL_pindel;EAS_AF=0.3929;END=5534921;EUR_AF=0.2157;MEINFO=AluY,11,280,-;NS=2504;SAS_AF=0.2127;SITEPOST=1;SVTYPE=DEL_ALU\tGT\t0|1\n20\t5629054\tBI_GS_DEL1_B2_P2738_430\tG\t<CN0>\t100\tPASS\tAC=1083;AF=0.216254;AFR_AF=0.3215;AMR_AF=0.1888;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.0893;END=5630397;EUR_AF=0.2535;MC=YL_CN_CHS_4338,YL_CN_CEU_5014,YL_CN_TSI_4002,YL_CN_YRI_5122,YL_CN_ESN_4056,UW_VH_1231,SI_BD_16816;NS=2504;SAS_AF=0.1861;SVTYPE=DEL\tGT\t1|1\n20\t6150945\tDEL_pindel_49512\tTAAGAGTGGACATCCGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTGAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA\tT\t.\tPASS\tAC=3288;AF=0.65655;AFR_AF=0.7345;AMR_AF=0.6772;AN=5008;CS=DEL_pindel;EAS_AF=0.7153;END=6151277;EUR_AF=0.6113;MEINFO=AluYa5,1,281,+;NS=2504;SAS_AF=0.5225;SITEPOST=0.9926;SVTYPE=DEL_ALU\tGT\t1|1\n20\t7274336\tDEL_pindel_49540\tTGACAATACATTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTATTTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC\tT\t.\tPASS\tAC=3697;AF=0.738219;AFR_AF=0.6362;AMR_AF=0.7651;AN=5008;CS=DEL_pindel;EAS_AF=0.7798;END=7274649;EUR_AF=0.7624;MEINFO=AluYa5,1,281,-;NS=2504;SAS_AF=0.7894;SITEPOST=0.9871;SVTYPE=DEL_ALU\tGT\t1|1\n20\t8816504\tALU_umary_ALU_12052\tC\t<INS:ME:ALU>\t.\t.\tAC=1184;AF=0.236422;AFR_AF=0.0212;AMR_AF=0.3818;AN=5008;CS=ALU_umary;EAS_AF=0.4891;EUR_AF=0.2425;MEINFO=AluYa5,1,281,+;NS=2504;SAS_AF=0.1575;SITEPOST=1;SVLEN=280;SVTYPE=ALU;TSD=AAAACTTAGTGAC\tGT\t0|1\n20\t9640983\tALU_umary_ALU_12058\tT\t<INS:ME:ALU>\t.\t.\tAC=826;AF=0.164936;AFR_AF=0.0499;AMR_AF=0.1686;AN=5008;CS=ALU_umary;EAS_AF=0.3333;EUR_AF=0.1531;MEINFO=AluYa5a2,36,281,+;NS=2504;SAS_AF=0.1564;SITEPOST=1;SVLEN=245;SVTYPE=ALU;TSD=AAGATTATTTTAATTT\tGT\t1|0\n20\t9696761\tDEL_pindel_49611\tCAAAAGCATACCCTAAAACTTAGAGTATAATAAAAAAAAAAAAATTAAAAAAAAA\tC\t.\tPASS\tAC=3088;AF=0.616613;AFR_AF=0.5552;AMR_AF=0.6239;AN=5008;CS=DEL_pindel;EAS_AF=0.6597;END=9696815;EUR_AF=0.5636;MEINFO=LINE1,6000,6019,+;NS=2504;SAS_AF=0.7045;SITEPOST=0.9881;SVTYPE=DEL_LINE1\tGT\t1|1\n20\t11517265\tDEL_pindel_49654\tTCAAATTCTGTCTTGGCCGGGCGCGGTGGCTCACGCCTGTAATCTCAGCACTTTGGGAGGCTGAGGTGGGCGGATCACCTGAGGTCAGGAGTTCGAGACCAGCCTGACCAACATAGTGAAACCCCGTCTCTACTAAAATACAAAAATTAGCCGGGCGCAGTGGCGGGCGCCTGTAATCTCAGCTACTTGGGAGCCTGAGGCAGGAGAATCGCTTGAACCCAGGAGGCGGAGGTTGCAGTGACCCAAGATCGCGCCATTGCACTCCAGCCTGGCAACAGAGCGAGACTGCCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA\tT\t.\tPASS\tAC=2776;AF=0.554313;AFR_AF=0.615;AMR_AF=0.4726;AN=5008;CS=DEL_pindel;EAS_AF=0.6369;END=11517588;EUR_AF=0.4911;MEINFO=AluSx,1,280,+;NS=2504;SAS_AF=0.5102;SITEPOST=0.999;SVTYPE=DEL_ALU\tGT\t0|1\n20\t14529068\tDEL_pindel_49814\tTAAAATACATTATCTGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCTGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTTGTCCCAGCTACTTGGGAGGCTGAGGCGGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGTGAGACTCCGTCTCAAAAAAAAAAAAAAAAAA\tT\t.\tPASS\tAC=2986;AF=0.596246;AFR_AF=0.4516;AMR_AF=0.5994;AN=5008;CS=DEL_pindel;EAS_AF=0.7143;END=14529381;EUR_AF=0.5994;MEINFO=AluYa5,1,281,+;NS=2504;SAS_AF=0.6646;SITEPOST=0.9831;SVTYPE=DEL_ALU\tGT\t1|1\n20\t15711537\tALU_umary_ALU_12088\tT\t<INS:ME:ALU>\t.\t.\tAC=498;AF=0.0994409;AFR_AF=0.09;AMR_AF=0.0908;AN=5008;CS=ALU_umary;EAS_AF=0.0595;EUR_AF=0.1759;MEINFO=AluUndef,28,276,-;NS=2504;SAS_AF=0.0808;SITEPOST=1;SVLEN=248;SVTYPE=ALU;TSD=null\tGT\t1|0\n20\t15711606\tBI_GS_DEL1_B1_P2748_679\tT\t<CN0>\t100\tPASS\tAC=3466;AF=0.692093;AFR_AF=0.6498;AMR_AF=0.745;AN=5008;CIEND=-59,59;CIPOS=-59,59;CS=DEL_union;EAS_AF=0.5159;END=15712437;EUR_AF=0.8429;MC=EM_DL_DEL10615111,YL_CN_ESN_4071;NS=2504;SAS_AF=0.7382;SVTYPE=DEL\tGT\t1|1\n20\t19061416\tDEL_pindel_49990\tTCCAGGGCCTCTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGC\tT\t.\tPASS\tAC=2508;AF=0.500799;AFR_AF=0.5144;AMR_AF=0.4683;AN=5008;CS=DEL_pindel;EAS_AF=0.3849;END=19061729;EUR_AF=0.5666;MEINFO=AluYa5,2,281,-;NS=2504;SAS_AF=0.5573;SITEPOST=0.9949;SVTYPE=DEL_ALU\tGT\t0|1\n20\t21286088\tEM_DL_DEL58037\tT\t<CN0>\t100\tPASS\tAC=3568;AF=0.71246;AFR_AF=0.4932;AMR_AF=0.7565;AN=5008;CIEND=-150,150;CIPOS=-150,150;CS=DEL_union;EAS_AF=0.8403;END=21288772;EUR_AF=0.6978;MC=SI_BD_16915,YL_CN_TSI_4021,BI_GS_DEL1_B1_P2754_267;NS=2504;SAS_AF=0.8609;SVTYPE=DEL\tGT\t1|1\n20\t22655322\tDEL_pindel_50095\tCAATATCCAGGAAATGGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTGGTGGTGGGCGCCTGTAATCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCATGAACCCAAGAGGCGGAGCTTGCAGTGAGCCGGGATAGCGCCACTGCAGTCCAGCTTGGGCGAAAGAGTGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA\tC\t.\tPASS\tAC=1095;AF=0.21865;AFR_AF=0.2821;AMR_AF=0.1542;AN=5008;CS=DEL_pindel;EAS_AF=0.1419;END=22655650;EUR_AF=0.2594;MEINFO=AluYb,1,281,+;NS=2504;SAS_AF=0.2157;SITEPOST=0.9999;SVTYPE=DEL_ALU\tGT\t0|1\n20\t23103317\tBI_GS_DEL1_B1_P2756_113\tG\t<CN0>\t100\tPASS\tAC=4412;AF=0.88099;AFR_AF=0.8888;AMR_AF=0.8934;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.9345;END=23103618;EUR_AF=0.8738;MC=SI_BD_16925,UW_VH_1238;NS=2504;SAS_AF=0.8139;SVTYPE=DEL\tGT\t1|0\n20\t24903696\tBI_GS_DEL1_B2_P2757_793\tA\t<CN0>\t100\tPASS\tAC=4098;AF=0.818291;AFR_AF=0.7595;AMR_AF=0.8156;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.9345;END=24904414;EUR_AF=0.7783;MC=SI_BD_16940,UW_VH_1239;NS=2504;SAS_AF=0.8211;SVTYPE=DEL\tGT\t1|1\n20\t26092755\tBI_GS_DEL1_B1_P2759_12\tC\t<CN0>\t100\tPASS\tAC=852;AF=0.170128;AFR_AF=0.1354;AMR_AF=0.1239;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.2788;END=26094314;EUR_AF=0.2127;MC=EM_DL_DEL10619725,SI_BD_16950,YL_CN_CEU_5032;NS=2504;SAS_AF=0.0941;SVTYPE=DEL\tGT\t0|1\n20\t26297587\tEM_DL_DEL58265\tA\t<CN0>\t100\tPASS\tAC=3479;AF=0.694688;AFR_AF=0.2519;AMR_AF=0.7133;AN=5008;CIEND=-150,150;CIPOS=-150,150;CS=DEL_union;EAS_AF=0.9851;END=26302710;EUR_AF=0.836;MC=YL_CN_MXL_3438;NS=2504;SAS_AF=0.8354;SVTYPE=DEL\tGT\t1|1\n20\t30899227\tDEL_pindel_50198\tTAAAGAACAGCAACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAA\tT\t.\tPASS\tAC=4313;AF=0.861222;AFR_AF=0.8752;AMR_AF=0.8516;AN=5008;CS=DEL_pindel;EAS_AF=0.8482;END=30899532;EUR_AF=0.8608;MEINFO=AluY,19,281,+;NS=2504;SAS_AF=0.863;SITEPOST=0.9999;SVTYPE=DEL_ALU\tGT\t0|1\n20\t33115811\tDEL_pindel_50252\tTAAAAACTACCCTACTGGAGTAGCCGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCGGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAA\tT\t.\tPASS\tAC=1857;AF=0.370807;AFR_AF=0.4153;AMR_AF=0.2752;AN=5008;CS=DEL_pindel;EAS_AF=0.3522;END=33116144;EUR_AF=0.4165;MEINFO=AluYa5,1,281,+;NS=2504;SAS_AF=0.3507;SITEPOST=0.9997;SVTYPE=DEL_ALU\tGT\t0|1\n20\t33241726\tYL_CN_MSL_3741\tA\t<CN0>\t100\tPASS\tAC=2039;AF=0.407149;AFR_AF=0.407;AMR_AF=0.6182;AN=5008;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0.4187;END=33244473;EUR_AF=0.4205;MC=BI_GS_DEL1_B1_P2766_183,YL_CN_ITU_4322,UW_VH_1923,YL_CN_JPT_4367,EM_DL_DEL58483,YL_CN_GWD_5441,SI_BD_16980;NS=2504;SAS_AF=0.2321;SVTYPE=DEL\tGT\t1|0\n20\t38337632\tDEL_pindel_50373\tTAAAAATATGACTCGAGAACCCGGGAAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA\tT\t.\tPASS\tAC=2582;AF=0.515575;AFR_AF=0.5787;AMR_AF=0.4971;AN=5008;CS=DEL_pindel;EAS_AF=0.4474;END=38337769;EUR_AF=0.5348;MEINFO=AluYa8,196,282,+;NS=2504;SAS_AF=0.4939;SITEPOST=0.9969;SVTYPE=DEL_ALU\tGT\t0|1\n20\t42271862\tEM_DL_DEL58706\tA\t<CN0>\t100\tPASS\tAC=3815;AF=0.761781;AFR_AF=0.6573;AMR_AF=0.7997;AN=5008;CIEND=-150,150;CIPOS=-150,150;CS=DEL_union;EAS_AF=0.7937;END=42274588;EUR_AF=0.8221;MC=YL_CN_TSI_4043,YL_CN_CDX_3532,YL_CN_ACB_4697,BI_GS_DEL1_B5_P2775_284,UW_VH_1648;NS=2504;SAS_AF=0.7812;SVTYPE=DEL\tGT\t1|1\n20\t42676125\tDEL_pindel_50510\tTTAACATCTGCACTAAGAAAAATTCCTCTGCCTTGGGATCCTGTTGATCTGTGACCTTACCCCCAACCCTGTGCTCTCTGAAACATGTGCTGTGTCCACTCAGGGTTAAATGGATTAAGGGCGGTGCAAGATGTGCTTTGTTAAACAGATGCTTGAAGGCAGCATGCTCGTTAAGAGTCATCACCAATCCCTAATCTCAAGTAATCAGGGACACAAACACTGCGGAAGGCCGCAGGGTCCTCTGCCTAGGAAAACCAGAGACCTTTGTTCACTTGTTTATCTGCTGACCTTCCCTCCACTATTGTCCCATGACCCTGCCAAATCCCCCTCTGTGAGAAACACCCAAGAATTATCAATAAAAAAAAATTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA\tT\t.\tPASS\tAC=4890;AF=0.976438;AFR_AF=0.9887;AMR_AF=0.9712;AN=5008;CS=DEL_pindel;EAS_AF=0.9821;END=42676524;EUR_AF=0.9533;MEINFO=SVA_F,1317,1627,+;NS=2504;SAS_AF=0.9816;SITEPOST=1;SVTYPE=DEL_SVA\tGT\t1|1\n20\t44359412\tDEL_pindel_50560\tCTCACTGCAACCTCCGCTTCCCAGGTTCAAGCAATTCTCCTGCCTCAGCCTCCTGAGTAGCCGGGATTACAGGCACGTGCCACCACACCCAGCTAATTTTTCTATTTTTAGTA\tC\t.\tPASS\tAC=2048;AF=0.408946;AFR_AF=0.2368;AMR_AF=0.611;AN=5008;CS=DEL_pindel;EAS_AF=0.4087;END=44359524;EUR_AF=0.5497;NS=2504;SAS_AF=0.3538;SITEPOST=0.9879;SVTYPE=DEL\tGT\t0|1\n20\t48543735\tDEL_pindel_50691\tCAAAGGTTGCAGTGAGCCGAGATGGTACCACTGCACTCCAGCCTGGGAACAAAGTGAGACTCCATCTCAAAAAAAAAAATA\tC\t.\tPASS\tAC=2414;AF=0.482029;AFR_AF=0.1309;AMR_AF=0.5793;AN=5008;CS=DEL_pindel;EAS_AF=0.754;END=48543815;EUR_AF=0.4414;NS=2504;SAS_AF=0.6493;SITEPOST=0.9997;SVTYPE=DEL\tGT\t1|1\n20\t52750565\tDEL_pindel_50820\tAGGAAGAGTGTTCTGGGTAAAGGACTCACAATTGGAAGAGTCCTCAGGCAG\tA\t.\tPASS\tAC=755;AF=0.150759;AFR_AF=0.2027;AMR_AF=0.1268;AN=5008;CS=DEL_pindel;EAS_AF=0.1944;END=52750615;EUR_AF=0.0924;NS=2504;SAS_AF=0.1125;SITEPOST=0.9996;SVTYPE=DEL\tGT\t0|1\n20\t53292651\tDEL_pindel_50836\tTTGATTCCTAATTTCTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCACTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGTGTGAGCCACCGCGCCCGGCC\tT\t.\tPASS\tAC=2925;AF=0.584065;AFR_AF=0.382;AMR_AF=0.5346;AN=5008;CS=DEL_pindel;EAS_AF=0.7391;END=53292965;EUR_AF=0.6819;MEINFO=AluYa5,1,281,-;NS=2504;SAS_AF=0.6319;SITEPOST=0.9953;SVTYPE=DEL_ALU\tGT\t1|1\n20\t53761850\tALU_umary_ALU_12214\tC\t<INS:ME:ALU>\t.\t.\tAC=3340;AF=0.666933;AFR_AF=0.5802;AMR_AF=0.6412;AN=5008;CS=ALU_umary;EAS_AF=0.7222;EUR_AF=0.7087;MEINFO=AluUndef,1,281,+;NS=2504;SAS_AF=0.7025;SITEPOST=0.9999;SVLEN=280;SVTYPE=ALU;TSD=GAAAAATTTC\tGT\t1|1\n20\t54114280\tL1_umary_LINE1_2942\tG\t<INS:ME:LINE1>\t.\t.\tAC=144;AF=0.028754;AFR_AF=0.0446;AMR_AF=0.0303;AN=5008;CS=L1_umary;EAS_AF=0.0109;EUR_AF=0.0119;MEINFO=LINE1,4739,5980,-;NS=2504;SAS_AF=0.0419;SITEPOST=1;SVLEN=1241;SVTYPE=LINE1;TSD=null\tGT\t1|0\n20\t54434518\tYL_CN_PEL_4029\tT\t<CN0>\t100\tPASS\tAC=3601;AF=0.71905;AFR_AF=0.8313;AMR_AF=0.8357;AN=5008;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0.5198;END=54440716;EUR_AF=0.7803;MEINFO=LINE1,5537,5600,+;NS=2504;SAS_AF=0.6268;SVTYPE=DEL_LINE1\tGT\t1|1\n20\t54463220\tDEL_pindel_50884\tGTGGGCATTCTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGCGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC\tG\t.\tPASS\tAC=3042;AF=0.607428;AFR_AF=0.7133;AMR_AF=0.6744;AN=5008;CS=DEL_pindel;EAS_AF=0.4861;END=54463537;EUR_AF=0.6093;MEINFO=AluYa1_1,1,281,-;NS=2504;SAS_AF=0.5399;SITEPOST=0.9913;SVTYPE=DEL_ALU\tGT\t0|1\n20\t55587403\tBI_GS_DEL1_B5_P2788_626\tT\t<CN0>\t100\tPASS\tAC=371;AF=0.0740815;AFR_AF=0.1172;AMR_AF=0.085;AN=5008;CIEND=-10,11;CIPOS=-10,11;CS=DEL_union;EAS_AF=0.0923;END=55587945;EUR_AF=0.0358;MC=UW_VH_2772,DEL_pindel_50908;NS=2504;SAS_AF=0.0286;SVTYPE=DEL\tGT\t1|1\n20\t57723444\tDEL_pindel_50971\tTAGAACAGAGCGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGACGGGCAGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACACGGTGAAACCCCGTCTCTACTAAAAATACAAAAATTAGCCGGGCATGGTGGCGCGCGCCTGTAGTCCCAGCTACACGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGTGGAGCTTGCAGTGAGTCGAGATCGCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAAACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA\tT\t.\tPASS\tAC=429;AF=0.0856629;AFR_AF=0.1679;AMR_AF=0.0605;AN=5008;CS=DEL_pindel;EAS_AF=0;END=57723778;EUR_AF=0.1193;MEINFO=AluYg6,1,281,+;NS=2504;SAS_AF=0.046;SITEPOST=1;SVTYPE=DEL_ALU\tGT\t0|1\n20\t57785904\tDEL_pindel_50975\tCCAAATCCCCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGCGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCCGGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAGAAAAAAAAAAAAAAAA\tC\t.\tPASS\tAC=1506;AF=0.300719;AFR_AF=0.4024;AMR_AF=0.2867;AN=5008;CS=DEL_pindel;EAS_AF=0.3571;END=57786120;EUR_AF=0.2117;MEINFO=AluYb,106,281,+;NS=2504;SAS_AF=0.2065;SITEPOST=0.9999;SVTYPE=DEL_ALU\tGT\t0|1\n20\t59804673\tDEL_pindel_51045\tGATATATATATATATATATATATATATATATATATATATATATATATATAT\tG\t.\tPASS\tAC=2332;AF=0.465655;AFR_AF=0.2995;AMR_AF=0.5562;AN=5008;CS=DEL_pindel;EAS_AF=0.4613;END=59804723;EUR_AF=0.5567;NS=2504;SAS_AF=0.5368;SITEPOST=0.9292;SVTYPE=DEL\tGT\t1|0\n20\t59974166\tDEL_pindel_51052\tAAAAACCCACTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCACTCTGTCGCCCAGGCCGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCATGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCCGCCTCAGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC\tA\t.\tPASS\tAC=2140;AF=0.427316;AFR_AF=0.4644;AMR_AF=0.4914;AN=5008;CS=DEL_pindel;EAS_AF=0.4415;END=59974487;EUR_AF=0.3926;MEINFO=AluYb3a1,1,281,-;NS=2504;SAS_AF=0.3528;SITEPOST=0.9989;SVTYPE=DEL_ALU\tGT\t1|0\n20\t61330155\tDEL_pindel_51121\tGGGGCTGGCCAGGGCCTCAAATGGTGTCCTCAGGAAGTCCAGGGGACAGCAGGGCTGGCCAGGGCCTCAAATGGTGTCCTCAGGAAGCCCAGGGGGCAGCA\tG\t.\tPASS\tAC=246;AF=0.0491214;AFR_AF=0.1051;AMR_AF=0.0317;AN=5008;CS=DEL_pindel;EAS_AF=0.0099;END=61330255;EUR_AF=0.0388;NS=2504;SAS_AF=0.0368;SITEPOST=0.98575;SVTYPE=DEL\tGT\t1|0\n20\t61724537\tYL_CN_ESN_4121\tG\t<CN0>\t100\tPASS\tAC=3802;AF=0.759185;AFR_AF=0.4236;AMR_AF=0.8184;AN=5008;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0.9911;END=61725820;EUR_AF=0.8072;MC=YL_CN_ITU_4354;NS=2504;SAS_AF=0.8824;SVTYPE=DEL\tGT\t1|1\n20\t61724701\tBI_GS_DEL1_B1_P2794_457\tT\t<CN0>\t100\tPASS\tAC=3803;AF=0.759385;AFR_AF=0.4251;AMR_AF=0.8156;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.9921;END=61725601;EUR_AF=0.8072;MC=SI_BD_17202,EM_DL_DEL10633574;NS=2504;SAS_AF=0.8824;SVTYPE=DEL\tGT\t1|1\n20\t62267510\tBI_GS_DEL1_B3_P2795_12\tC\t<CN0>\t100\tPASS\tAC=1631;AF=0.325679;AFR_AF=0.2194;AMR_AF=0.4741;AN=5008;CIEND=-20,20;CIPOS=-20,20;CS=DEL_union;EAS_AF=0.1002;END=62268021;EUR_AF=0.6143;NS=2504;SAS_AF=0.2996;SVTYPE=DEL\tGT\t0|1\n20\t62392041\tBI_GS_DEL1_B1_P2795_223\tA\t<CN0>\t100\tPASS\tAC=130;AF=0.0259585;AFR_AF=0.0121;AMR_AF=0.0346;AN=5008;CIEND=-5,6;CIPOS=-5,6;CS=DEL_union;EAS_AF=0.003;END=62392585;EUR_AF=0.0795;NS=2504;SAS_AF=0.0072;SVTYPE=DEL\tGT\t1|0\n20\t62767800\tDEL_pindel_51195\tTCCCCTGACCGATTTAGCCGTTATTGAGGGACATCGAGGTTGCTTGGTGTGGCGG\tT\t.\tPASS\tAC=1999;AF=0.399161;AFR_AF=0.2973;AMR_AF=0.4597;AN=5008;CS=DEL_pindel;EAS_AF=0.4931;END=62767854;EUR_AF=0.4185;NS=2504;SAS_AF=0.3773;SITEPOST=0.9982;SVTYPE=DEL\tGT\t0|1\n21\t10945865\tDUP_gs_CNV_21_10945865_10990763\tA\t<CN2>,<CN3>\t.\tPASS\tAC=4790,42;AF=0.95647,0.00838658;AFR_AF=0.9644,0.0023;AMR_AF=0.9222,0.0101;AN=5008;CS=DUP_gs;EAS_AF=0.9871,0.0109;END=10990763;EUR_AF=0.9205,0.0109;NS=2504;SAS_AF=0.9755,0.0102;SITEPOST=1;SVTYPE=CNV\tGT\t1|1\n21\t10992014\tDUP_gs_CNV_21_10992014_10999734\tA\t<CN2>,<CN3>\t.\tPASS\tAC=4809,23;AF=0.960264,0.00459265;AFR_AF=0.969,0.0015;AMR_AF=0.9294,0.0086;AN=5008;CS=DUP_gs;EAS_AF=0.9831,0.005;END=10999734;EUR_AF=0.9254,0.002;NS=2504;SAS_AF=0.9826,0.0082;SITEPOST=0.9998;SVTYPE=CNV\tGT\t1|1\n21\t14415002\tALU_umary_ALU_12260\tA\t<INS:ME:ALU>\t.\t.\tAC=2141;AF=0.427516;AFR_AF=0.5325;AMR_AF=0.3689;AN=5008;CS=ALU_umary;EAS_AF=0.4107;EUR_AF=0.3658;MEINFO=AluYc1,1,281,-;NS=2504;SAS_AF=0.408;SITEPOST=1;SVLEN=280;SVTYPE=ALU;TSD=null\tGT\t0|1\n21\t14981354\tBI_GS_CNV_21_14981354_15016529\tT\t<CN0>\t100\tPASS\tAC=3443;AF=0.6875;AFR_AF=0.8782;AMR_AF=0.4755;AN=5008;CIEND=0,500;CIPOS=-500,0;CS=DEL_union;EAS_AF=0.8333;END=15016529;EUR_AF=0.5885;NS=2504;SAS_AF=0.5317;SVTYPE=DEL\tGT\t1|1\n21\t15244513\tDUP_gs_CNV_21_15244513_15253042\tT\t<CN0>,<CN2>,<CN3>,<CN4>\t.\tPASS\tAC=215,817,84,14;AF=0.0429313,0.163139,0.0167732,0.00279553;AFR_AF=0.0734,0.0998,0.0015,0.0008;AMR_AF=0.0533,0.2061,0.0187,0.0043;AN=5008;CS=DUP_gs;EAS_AF=0.0089,0.0486,0.005,0;END=15253042;EUR_AF=0.0517,0.2376,0.0388,0.004;NS=2504;SAS_AF=0.0204,0.2597,0.0256,0.0061;SITEPOST=0.9981;SVTYPE=CNV\tGT\t2|0\n21\t15253724\tDUP_gs_CNV_21_15253724_15259810\tT\t<CN0>,<CN2>\t.\tPASS\tAC=216,719;AF=0.043131,0.14357;AFR_AF=0.0734,0.0469;AMR_AF=0.0519,0.196;AN=5008;CS=DUP_gs;EAS_AF=0.0079,0.0516;END=15259810;EUR_AF=0.0537,0.2455;NS=2504;SAS_AF=0.0215,0.227;SITEPOST=0.9998;SVTYPE=CNV\tGT\t0|2\n21\t15264074\tDUP_gs_CNV_21_15264074_15272540\tA\t<CN0>,<CN2>,<CN3>,<CN4>\t.\tPASS\tAC=117,606,83,30;AF=0.0233626,0.121006,0.0165735,0.00599042;AFR_AF=0.0635,0.0408,0.003,0;AMR_AF=0.0072,0.1527,0.0447,0.0014;AN=5008;CS=DUP_gs;EAS_AF=0.0109,0.0397,0.0208,0.0218;END=15272540;EUR_AF=0.0129,0.2296,0.0089,0;NS=2504;SAS_AF=0.0041,0.1789,0.0184,0.0072;SITEPOST=0.996;SVTYPE=CNV\tGT\t2|0\n21\t15652867\tALU_umary_ALU_12269\tG\t<INS:ME:ALU>\t.\t.\tAC=512;AF=0.102236;AFR_AF=0.118;AMR_AF=0.0778;AN=5008;CS=ALU_umary;EAS_AF=0.0397;EUR_AF=0.172;MEINFO=AluYa5,12,277,+;NS=2504;SAS_AF=0.091;SITEPOST=1;SVLEN=265;SVTYPE=ALU;TSD=AAAAAATGATTAGG\tGT\t1|0\n21\t16275282\tDEL_pindel_51226\tTTGCAGTGAGCCGAGATCGTGCCACTGCACGCCAGCCTGGGGACAGAGCAAGACGCTGTTTCAAAAAAAAAAAATAATAA\tT\t.\tPASS\tAC=2729;AF=0.544928;AFR_AF=0.708;AMR_AF=0.6282;AN=5008;CS=DEL_pindel;EAS_AF=0.3185;END=16275361;EUR_AF=0.5527;NS=2504;SAS_AF=0.4908;SITEPOST=0.9998;SVTYPE=DEL\tGT\t1|0\n21\t18612378\tSI_BD_17271\tC\t<CN0>\t100\tPASS\tAC=1921;AF=0.383586;AFR_AF=0.1051;AMR_AF=0.3905;AN=5008;CIEND=-85,272;CIPOS=-272,82;CS=DEL_union;EAS_AF=0.4028;END=18613698;EUR_AF=0.5427;MC=EM_DL_DEL10638162,YL_CN_ITU_4395;NS=2504;SAS_AF=0.5716;SVTYPE=DEL\tGT\t1|1\n21\t19326713\tSI_BD_17275\tA\t<CN0>\t100\tPASS\tAC=1292;AF=0.257987;AFR_AF=0.087;AMR_AF=0.2464;AN=5008;CIEND=-50,217;CIPOS=-217,50;CS=DEL_union;EAS_AF=0.2877;END=19329268;EUR_AF=0.2843;MC=EM_DL_DEL59865,UW_VH_2141,UW_VH_3874,YL_CN_KHV_4704,BI_GS_DEL1_B2_P2816_224,YL_CN_JPT_4446;NS=2504;SAS_AF=0.4397;SVTYPE=DEL\tGT\t0|1\n21\t22051926\tDEL_pindel_51322\tTTTTTGTTTTTTTTTGTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAG\tT\t.\tPASS\tAC=1669;AF=0.333267;AFR_AF=0.3828;AMR_AF=0.3112;AN=5008;CS=DEL_pindel;EAS_AF=0.4077;END=22051995;EUR_AF=0.2048;MEINFO=AluYc,242,282,-;NS=2504;SAS_AF=0.3374;SITEPOST=0.9999;SVTYPE=DEL_ALU\tGT\t0|1\n21\t23746673\tDEL_pindel_51350\tTACCCTAAGCCATATCTCTCAAGTTCAAAGTTCTACAGCTCTCTAGGGTAGGGGCAAA\tT\t.\tPASS\tAC=416;AF=0.0830671;AFR_AF=0.0756;AMR_AF=0.0533;AN=5008;CS=DEL_pindel;EAS_AF=0.0962;END=23746730;EUR_AF=0.0865;NS=2504;SAS_AF=0.0971;SITEPOST=0.9999;SVTYPE=DEL\tGT\t0|1\n21\t24742232\tDEL_pindel_51373\tTAAAAAAATTATCTGGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAA\tT\t.\tPASS\tAC=1901;AF=0.379593;AFR_AF=0.5605;AMR_AF=0.3617;AN=5008;CS=DEL_pindel;EAS_AF=0.2282;END=24742546;EUR_AF=0.3549;MEINFO=AluYa3_1,1,281,+;NS=2504;SAS_AF=0.3292;SITEPOST=0.9942;SVTYPE=DEL_ALU\tGT\t1|0\n21\t24828945\tDEL_pindel_51375\tCAAGAAATATAGTGACAGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTGGTAGCGGGCGCCTGTAGTCCCAGCTACTCAGGAGGCTGAGGCAGGAGAATGGCGTGAACCTGGGAGGCGGAGCTTGCAGTGAGCCGAGATCGCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAA\tC\t.\tPASS\tAC=2052;AF=0.409744;AFR_AF=0.3215;AMR_AF=0.4654;AN=5008;CS=DEL_pindel;EAS_AF=0.497;END=24829264;EUR_AF=0.3648;MEINFO=AluYc1,2,281,+;NS=2504;SAS_AF=0.4458;SITEPOST=0.9916;SVTYPE=DEL_ALU\tGT\t1|0\n21\t26497431\tALU_umary_ALU_12334\tG\t<INS:ME:ALU>\t.\t.\tAC=1899;AF=0.379193;AFR_AF=0.2458;AMR_AF=0.3876;AN=5008;CS=ALU_umary;EAS_AF=0.5357;EUR_AF=0.3787;MEINFO=AluYa3_5,1,259,+;NS=2504;SAS_AF=0.3926;SITEPOST=1;SVLEN=258;SVTYPE=ALU;TSD=AAGGAAGGATG\tGT\t1|0\n21\t26825131\tDEL_pindel_51420\tTAAAGTGTAGATGCTCTATTCTCACTCATAGGTGGGAATTGAACAATGAGATCACATGGACACAGGAAGGGGAATATCACACTCTGGGGACTGTGGTGGGGTCGGGGGAGGGGGGAGGGATAGCATTGGGAGATATACCTAATGCTAGATGACACATTAGTGGGTGCAGCGCACCAGCATGGCACATGTATACATATGTAACTAACCTGCACAATGTGCACATGTACCCTAAAACTTAGAGTATAATAAAAAAAAAAAAAAAAAAAAA\tT\t.\tPASS\tAC=2188;AF=0.436901;AFR_AF=0.5628;AMR_AF=0.4006;AN=5008;CS=DEL_pindel;EAS_AF=0.2242;END=26825398;EUR_AF=0.5646;MEINFO=LINE1,5793,5820,+;NS=2504;SAS_AF=0.3804;SITEPOST=0.9989;SVTYPE=DEL_LINE1\tGT\t1|0\n21\t27374095\tINV_delly_INV00066128\tT\t<INV>\t.\tPASS\tAC=4299;AF=0.858427;AFR_AF=0.8215;AMR_AF=0.8228;AN=5008;CIEND=-62,62;CIPOS=-62,62;CS=INV_delly;EAS_AF=0.9226;END=27374746;EUR_AF=0.9046;IMPRECISE;NS=2504;SAS_AF=0.82;SITEPOST=1;SVTYPE=INV\tGT\t1|0\n21\t28020653\tINV_delly_INV00066155\tC\t<INV>\t.\tPASS\tAC=2696;AF=0.538339;AFR_AF=0.5514;AMR_AF=0.5173;AN=5008;CIEND=-105,105;CIPOS=-105,105;CS=INV_delly;EAS_AF=0.6091;END=28021711;EUR_AF=0.5159;IMPRECISE;MC=CINV_delly_INV00066154;NS=2504;SAS_AF=0.4857;SITEPOST=1;SVTYPE=INV\tGT\t1|0\n21\t28221359\tALU_umary_ALU_12341\tT\t<INS:ME:ALU>\t.\t.\tAC=800;AF=0.159744;AFR_AF=0.1256;AMR_AF=0.2392;AN=5008;CS=ALU_umary;EAS_AF=0.003;EUR_AF=0.2724;MEINFO=AluYe5,1,264,-;NS=2504;SAS_AF=0.1953;SITEPOST=1;SVLEN=263;SVTYPE=ALU;TSD=CCGGGAAATGCTTTTTATT\tGT\t0|1\n21\t30552224\tUW_VH_1264\tA\t<CN0>\t100\tPASS\tAC=2540;AF=0.507188;AFR_AF=0.2526;AMR_AF=0.5418;AN=5008;CIEND=0,534;CIPOS=-414,0;CS=DEL_union;EAS_AF=0.4921;END=30552588;EUR_AF=0.7256;MC=DEL_pindel_51520,BI_GS_DEL1_B2_P2827_413;NS=2504;SAS_AF=0.6176;SVTYPE=DEL\tGT\t1|1\n21\t30601816\tDEL_pindel_51522\tACCGGCTATTAGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGCGGTGGCGGGCACCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCCGACCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGGGGG\tA\t.\tPASS\tAC=3640;AF=0.726837;AFR_AF=0.8222;AMR_AF=0.5965;AN=5008;CS=DEL_pindel;EAS_AF=0.5813;END=30602156;EUR_AF=0.7475;MEINFO=AluYb6_2,1,281,+;NS=2504;SAS_AF=0.819;SITEPOST=0.9821;SVTYPE=DEL_ALU\tGT\t1|0\n21\t37014963\tBI_GS_DEL1_B1_P2834_15\tA\t<CN0>\t100\tPASS\tAC=3947;AF=0.788139;AFR_AF=0.8253;AMR_AF=0.7839;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.7292;END=37015170;EUR_AF=0.8042;NS=2504;SAS_AF=0.7853;SVTYPE=DEL\tGT\t1|1\n21\t37237944\tALU_umary_ALU_12400\tT\t<INS:ME:ALU>\t.\t.\tAC=1388;AF=0.277157;AFR_AF=0.1218;AMR_AF=0.2925;AN=5008;CS=ALU_umary;EAS_AF=0.2708;EUR_AF=0.4423;MEINFO=AluYa4_5,1,281,-;NS=2504;SAS_AF=0.3129;SITEPOST=1;SVLEN=280;SVTYPE=ALU;TSD=AAAAAATGTTATTTTT\tGT\t1|0\n21\t37321097\tALU_umary_ALU_12403\tT\t<INS:ME:ALU>\t.\t.\tAC=393;AF=0.0784744;AFR_AF=0.0855;AMR_AF=0.0865;AN=5008;CS=ALU_umary;EAS_AF=0.003;EUR_AF=0.1402;MEINFO=AluYa4_5,1,281,-;NS=2504;SAS_AF=0.0777;SITEPOST=1;SVLEN=280;SVTYPE=ALU;TSD=TGTTGAATCTTTTT\tGT\t0|1\n21\t37864436\tDEL_pindel_51688\tTAAAAAAAATGCAAGGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGAAGGCCGAGGCGGGTGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGCGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCCGGCCTGGGCGACAGAGCGAGACTCCGTCCCAAAAAAAAAAAAAAAAAAAA\tT\t.\tPASS\tAC=796;AF=0.158946;AFR_AF=0.1952;AMR_AF=0.0504;AN=5008;CS=DEL_pindel;EAS_AF=0.2867;END=37864758;EUR_AF=0.0268;MEINFO=AluYb6_2,1,281,+;NS=2504;SAS_AF=0.1912;SITEPOST=0.99975;SVTYPE=DEL_ALU\tGT\t0|1\n21\t39004560\tALU_umary_ALU_12411\tT\t<INS:ME:ALU>\t.\t.\tAC=681;AF=0.135982;AFR_AF=0.0318;AMR_AF=0.1124;AN=5008;CS=ALU_umary;EAS_AF=0.2768;EUR_AF=0.1809;MEINFO=AluUndef,2,280,+;NS=2504;SAS_AF=0.1022;SITEPOST=1;SVLEN=278;SVTYPE=ALU;TSD=AAAAATTACCTCGT\tGT\t1|0\n21\t39900346\tDEL_pindel_51713\tGCCATAGCAAACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCACCCGCCACTACGCCCGGCTAATTTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGC\tG\t.\tPASS\tAC=1895;AF=0.378395;AFR_AF=0.3215;AMR_AF=0.5115;AN=5008;CS=DEL_pindel;EAS_AF=0.2282;END=39900670;EUR_AF=0.497;MEINFO=AluYa3_4,2,281,-;NS=2504;SAS_AF=0.3937;SITEPOST=0.9989;SVTYPE=DEL_ALU\tGT\t1|0\n21\t41586865\tDEL_pindel_51770\tTAAAGATATGGAATCCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAGTACAAAAAATTAGCCGGGCGCGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCCGGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA\tT\t.\tPASS\tAC=2386;AF=0.476438;AFR_AF=0.388;AMR_AF=0.513;AN=5008;CS=DEL_pindel;EAS_AF=0.5784;END=41587190;EUR_AF=0.4722;MEINFO=AluYb3a1,16,281,+;NS=2504;SAS_AF=0.4693;SITEPOST=0.99725;SVTYPE=DEL_ALU\tGT\t0|1\n21\t42054568\tDEL_pindel_51789\tAGGAAGGGAAGGGAAGGGAGCGGAGGGGGAGGGGAGGGGAGGGGAAGGGAGCGGAGGGGAAGGGAGCGGAGGGGAAGGGAGGGGAGGGGAGGGGAGGGGAAGGGAGCGGAGGGGGGGGGGAGGGGAGGGAAGGAGAGGGGAGGGGAGGGGAGGGAAGGGAAGGGAAGGGAAGGGAAGGGAAGGGAAGGGAAG\tA\t.\tPASS\tAC=1079;AF=0.215455;AFR_AF=0.2542;AMR_AF=0.1441;AN=5008;CS=DEL_pindel;EAS_AF=0.255;END=42054759;EUR_AF=0.1392;NS=2504;SAS_AF=0.2515;SITEPOST=0.99285;SVTYPE=DEL\tGT\t1|1\n21\t42341846\tDEL_pindel_51800\tTGGAAGGAATTAAAGAGAGAGAAGTTAGGAAGGAGGGAGGGAGGAAAGATACAGAA\tT\t.\tPASS\tAC=1458;AF=0.291134;AFR_AF=0.407;AMR_AF=0.3473;AN=5008;CS=DEL_pindel;EAS_AF=0.1964;END=42341901;EUR_AF=0.2465;NS=2504;SAS_AF=0.2382;SITEPOST=0.9956;SVTYPE=DEL\tGT\t0|1\n21\t42402882\tDEL_pindel_51802\tTAGAAAATACCTAGAGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAAGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAA\tT\t.\tPASS\tAC=3016;AF=0.602236;AFR_AF=0.7383;AMR_AF=0.6254;AN=5008;CS=DEL_pindel;EAS_AF=0.3631;END=42403203;EUR_AF=0.6521;MEINFO=AluYa5,1,281,+;NS=2504;SAS_AF=0.5971;SITEPOST=0.9871;SVTYPE=DEL_ALU\tGT\t1|0\n21\t45619181\tUW_VH_1275\tG\t<CN0>\t100\tPASS\tAC=1284;AF=0.25639;AFR_AF=0.2905;AMR_AF=0.121;AN=5008;CIEND=0,428;CIPOS=-473,0;CS=DEL_union;EAS_AF=0.2639;END=45620711;EUR_AF=0.2555;MC=YL_CN_STU_4348,EM_DL_DEL10651203,SI_BD_17477,BI_GS_DEL1_B1_P2842_470;NS=2504;SAS_AF=0.2996;SVTYPE=DEL\tGT\t1|1\n21\t45850285\tDEL_pindel_51926\tTGAGCAAGTGGATTTCTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCCAGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTTCTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC\tT\t.\tPASS\tAC=3185;AF=0.635982;AFR_AF=0.6316;AMR_AF=0.5836;AN=5008;CS=DEL_pindel;EAS_AF=0.7014;END=45850611;EUR_AF=0.6322;MEINFO=AluYb8,1,281,-;NS=2504;SAS_AF=0.6155;SITEPOST=0.9786;SVTYPE=DEL_ALU\tGT\t1|1\n21\t47657351\tBI_GS_DEL1_B1_P2844_480\tC\t<CN0>\t100\tPASS\tAC=2029;AF=0.405152;AFR_AF=0.4803;AMR_AF=0.4928;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.3254;END=47658672;EUR_AF=0.3598;MC=EM_DL_DEL10653640,YL_CN_STU_4352,YL_CN_ITU_4429,SI_BD_17513,YL_CN_ACB_4794,UW_VH_2781;NS=2504;SAS_AF=0.3701;SVTYPE=DEL\tGT\t0|1\n22\t16050654\tDUP_gs_CNV_22_16050654_16063474\tA\t<CN0>,<CN2>,<CN3>,<CN4>\t.\tPASS\tAC=9,87,599,20;AF=0.00179712,0.0173722,0.119609,0.00399361;AFR_AF=0.0061,0.0363,0.0053,0;AMR_AF=0,0.0101,0.219,0.0072;AN=5008;CS=DUP_gs;EAS_AF=0.001,0.0169,0.2361,0.0099;END=16063474;EUR_AF=0,0.007,0.0944,0.003;NS=2504;SAS_AF=0,0.0082,0.1094,0.002;SITEPOST=0.9912;SVTYPE=CNV\tGT\t3|0\n22\t17026339\tSI_BD_17531\tT\t<CN0>\t100\tPASS\tAC=2130;AF=0.425319;AFR_AF=0.4115;AMR_AF=0.536;AN=5008;CIEND=-50,76;CIPOS=-76,50;CS=DEL_union;EAS_AF=0.4375;END=17027748;EUR_AF=0.3877;NS=2504;SAS_AF=0.3916;SVTYPE=DEL\tGT\t1|1\n22\t18003573\tUW_VH_25223\tG\t<CN0>\t100\tPASS\tAC=1523;AF=0.304113;AFR_AF=0.1483;AMR_AF=0.2205;AN=5008;CIEND=0,356;CIPOS=-323,0;CS=DEL_union;EAS_AF=0.3046;END=18004242;EUR_AF=0.4294;MC=UW_VH_13817,BI_GS_DEL1_B5_P2864_3,UW_VH_10605,UW_VH_10877,BI_GS_DEL1_B3_P2864_1,UW_VH_2431,SI_BD_17543;NS=2504;SAS_AF=0.4448;SVTYPE=DEL\tGT\t1|1\n22\t18047360\tDEL_pindel_52026\tCTATCCTTGCTTTTATTTATTTATTTATTTATTTATTTATTTATTTTATTTTATTTTATTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCCGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACCACAGGCGCCCGCCACCACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCCT\tC\t.\tPASS\tAC=1787;AF=0.356829;AFR_AF=0.2731;AMR_AF=0.3876;AN=5008;CS=DEL_pindel;EAS_AF=0.373;END=18047718;EUR_AF=0.4443;MEINFO=AluYb3a1,1,281,-;NS=2504;SAS_AF=0.3415;SITEPOST=0.9989;SVTYPE=DEL_ALU\tGT\t1|0\n22\t18057747\tEM_DL_DEL60768\tT\t<CN0>\t100\tPASS\tAC=3620;AF=0.722843;AFR_AF=0.7231;AMR_AF=0.6542;AN=5008;CIEND=-150,150;CIPOS=-150,150;CS=DEL_union;EAS_AF=0.501;END=18060454;EUR_AF=0.8797;MC=BI_GS_DEL1_B4_P2864_12,YL_CN_ACB_4813,YL_CN_CDX_3610,UW_VH_1280,YL_CN_BEB_3500,SI_BD_17546,YL_CN_MXL_3558;NS=2504;SAS_AF=0.8384;SVTYPE=DEL\tGT\t1|0\n22\t18099516\tDEL_pindel_52031\tGAAAGAGTCATACAAGAGGCCAGGCGCGGTGGCTCAAGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGTGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAA\tG\t.\tPASS\tAC=1404;AF=0.280351;AFR_AF=0.4077;AMR_AF=0.2882;AN=5008;CS=DEL_pindel;EAS_AF=0.2113;END=18099826;EUR_AF=0.2982;MEINFO=AluYa5,1,281,+;NS=2504;SAS_AF=0.1554;SITEPOST=0.9999;SVTYPE=DEL_ALU\tGT\t1|1\n22\t18141696\tEM_DL_DEL60817\tG\t<CN0>\t100\tPASS\tAC=338;AF=0.067492;AFR_AF=0.0068;AMR_AF=0.1326;AN=5008;CIEND=-150,150;CIPOS=-150,150;CS=DEL_union;EAS_AF=0.004;END=18144628;EUR_AF=0.173;MC=YL_CN_PEL_4123,BI_GS_DEL1_B5_P2864_119,UW_VH_1282,YL_CN_ITU_4453;NS=2504;SAS_AF=0.0603;SVTYPE=DEL\tGT\t1|0\n22\t18283896\tDEL_pindel_52042\tATCCTGAGTTTCCTTTTTCTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCCGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC\tA\t.\tPASS\tAC=1780;AF=0.355431;AFR_AF=0.5008;AMR_AF=0.268;AN=5008;CS=DEL_pindel;EAS_AF=0.3363;END=18284218;EUR_AF=0.2753;MEINFO=AluYa5,1,281,-;NS=2504;SAS_AF=0.3231;SITEPOST=0.999;SVTYPE=DEL_ALU\tGT\t1|0\n22\t18977575\tDEL_pindel_52051\tCTGATCACATTTCAACATGAGATTTGGAGGGGCCAGACCTCAAAACTGCATCAGATACATTCATGT\tC\t.\tPASS\tAC=2405;AF=0.480232;AFR_AF=0.4236;AMR_AF=0.5231;AN=5008;CS=DEL_pindel;EAS_AF=0.5526;END=18977640;EUR_AF=0.665;NS=2504;SAS_AF=0.2618;SITEPOST=0.9995;SVTYPE=DEL\tGT\t1|1\n22\t19571624\tUW_VH_1284\tC\t<CN0>\t100\tPASS\tAC=1704;AF=0.340256;AFR_AF=0.2958;AMR_AF=0.3156;AN=5008;CIEND=0,462;CIPOS=-522,0;CS=DEL_union;EAS_AF=0.3204;END=19573094;EUR_AF=0.3499;MC=YL_CN_GIH_3265,EM_DL_DEL10655388,YL_CN_LWK_4013,YL_CN_CHS_4492,YL_CN_GBR_4262,SI_BD_17567,YL_CN_ESN_4215,YL_CN_MSL_3839,YL_CN_ACB_4828,YL_CN_MXL_3570,BI_GS_DEL1_B2_P2865_408,YL_CN_BEB_3511;NS=2504;SAS_AF=0.4284;SVTYPE=DEL\tGT\t1|1\n22\t20950623\tBI_GS_DEL1_B5_P2866_441\tC\t<CN0>\t100\tPASS\tAC=812;AF=0.162141;AFR_AF=0.1278;AMR_AF=0.1657;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.1438;END=20953843;EUR_AF=0.2018;MC=YL_CN_CLM_3679,YL_CN_MXL_3579,UW_VH_1930,SI_BD_17578,EM_DL_DEL61007,UW_VH_7773;NS=2504;SAS_AF=0.184;SVTYPE=DEL\tGT\t0|1\n22\t23576847\tBI_GS_DEL1_B2_P2869_487\tT\t<CN0>\t100\tPASS\tAC=701;AF=0.139976;AFR_AF=0.0272;AMR_AF=0.17;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.0526;END=23577807;EUR_AF=0.2763;MC=UW_VH_19548,UW_VH_10388,EM_DL_DEL10657232,UW_VH_11136,SI_BD_17601,UW_VH_25322,UW_VH_50,UW_VH_4531;NS=2504;SAS_AF=0.2209;SVTYPE=DEL\tGT\t1|1\n22\t23900769\tBI_GS_DEL1_B1_P2869_715\tG\t<CN0>\t100\tPASS\tAC=1078;AF=0.215256;AFR_AF=0.2322;AMR_AF=0.1383;AN=5008;CIEND=0,1;CIPOS=0,1;CS=DEL_union;EAS_AF=0.4306;END=23903232;EUR_AF=0.1431;MC=UW_VH_3340,EM_DL_DEL61393,YL_CN_PJL_4847,YL_CN_MSL_3867,SI_BD_17604;NS=2504;SAS_AF=0.0992;SVTYPE=DEL\tGT\t1|0\n22\t23964852\tDEL_pindel_52182\tTTTTCATAGAGACCATTTAAAAAAGAATATGAAAATGCTACAATTAAAAATAGTCATGA\tT\t.\tPASS\tAC=1127;AF=0.22504;AFR_AF=0.2103;AMR_AF=0.2075;AN=5008;CS=DEL_pindel;EAS_AF=0.2688;END=23964910;EUR_AF=0.2326;NS=2504;SAS_AF=0.2045;SITEPOST=0.9995;SVTYPE=DEL\tGT\t1|1\n22\t24025584\tBI_GS_DEL1_B5_P2870_15\tG\t<CN0>\t100\tPASS\tAC=384;AF=0.0766773;AFR_AF=0.0673;AMR_AF=0.1182;AN=5008;CIEND=-1,1;CIPOS=-1,1;CS=DEL_union;EAS_AF=0.0179;END=24027537;EUR_AF=0.168;MC=UW_VH_1931,EM_DL_DEL10657482,YL_CN_TSI_4213,UW_VH_19664,UW_VH_11145;NS=2504;SAS_AF=0.0266;SVTYPE=DEL\tGT\t1|1\n22\t24198505\tALU_umary_ALU_12455\tA\t<INS:ME:ALU>\t.\t.\tAC=1264;AF=0.252396;AFR_AF=0.267;AMR_AF=0.2767;AN=5008;CS=ALU_umary;EAS_AF=0.1954;EUR_AF=0.3131;MEINFO=AluY,1,277,+;NS=2504;SAS_AF=0.2117;SITEPOST=1;SVLEN=276;SVTYPE=ALU;TSD=null\tGT\t0|1\n22\t24276431\tUW_VH_1651\tA\t<CN0>\t100\tPASS\tAC=3501;AF=0.699081;AFR_AF=0.4228;AMR_AF=0.6369;AN=5008;CIEND=0,488;CIPOS=-455,0;CS=DEL_union;EAS_AF=0.8671;END=24279231;EUR_AF=0.7594;MC=SI_BD_17610,YL_CN_KHV_4802,YL_CN_CDX_3681,YL_CN_IBS_3927,EM_DL_DEL61475,YL_CN_CHB_4441,YL_CN_BEB_3551,BI_GS_DEL1_B1_P2870_194;NS=2504;SAS_AF=0.8814;SVTYPE=DEL\tGT\t0|1\n22\t24326713\tDUP_gs_CNV_22_24326713_24333476\tC\t<CN0>,<CN2>\t.\tPASS\tAC=2131,55;AF=0.425519,0.0109824;AFR_AF=0.1989,0.0333;AMR_AF=0.4798,0.0029;AN=5008;CS=DUP_gs;EAS_AF=0.3056,0.0079;END=24333476;EUR_AF=0.5964,0;NS=2504;SAS_AF=0.6411,0.001;SITEPOST=1;SVTYPE=CNV\tGT\t0|1\n22\t26891514\tDEL_pindel_52250\tATGTGTATATATATACACATATATATATGTGTGTGTGTGTATACATATATACATATATATGTGTGTATATACATATATGTGTATATACATGTGTATATATACATGTATATGCATGTGTGTATATATATACATATATG\tA\t.\tPASS\tAC=1554;AF=0.310304;AFR_AF=0.2549;AMR_AF=0.2997;AN=5008;CS=DEL_pindel;EAS_AF=0.2698;END=26891650;EUR_AF=0.3151;NS=2504;SAS_AF=0.4294;SITEPOST=0.9966;SVTYPE=DEL\tGT\t1|0\n22\t29633088\tBI_GS_DEL1_B1_P2875_469\tT\t<CN0>\t100\tPASS\tAC=857;AF=0.171126;AFR_AF=0.2943;AMR_AF=0.1023;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.1438;END=29635394;EUR_AF=0.0934;MC=YL_CN_MXL_3612,UW_VH_3527;NS=2504;SAS_AF=0.1616;SVTYPE=DEL\tGT\t1|1\n22\t31776449\tDUP_gs_CNV_22_31776449_31780070\tT\t<CN0>,<CN2>\t.\tPASS\tAC=786,3;AF=0.156949,0.00059904;AFR_AF=0.0719,0;AMR_AF=0.0418,0;AN=5008;CS=DUP_gs;EAS_AF=0.3601,0.002;END=31780070;EUR_AF=0.0646,0.001;MC=BI_GS_DEL1_B3_P2877_21,UW_VH_4398,EM_DL_DEL61815,YL_CN_FIN_4129;NS=2504;SAS_AF=0.2393,0;SITEPOST=1;SVTYPE=CNV\tGT\t1|1\n22\t32819942\tALU_umary_ALU_12480\tT\t<INS:ME:ALU>\t.\t.\tAC=217;AF=0.0433307;AFR_AF=0.0053;AMR_AF=0.0648;AN=5008;CS=ALU_umary;EAS_AF=0.001;EUR_AF=0.1173;MEINFO=AluUndef,30,260,+;NS=2504;SAS_AF=0.047;SITEPOST=1;SVLEN=230;SVTYPE=ALU;TSD=AAAACTCCACAGCTTT\tGT\t1|1\n22\t33751615\tDEL_pindel_52369\tTCTCAAAAGTAGATCTTCTAACTCCTCCTGGACCACCCTTTCTCTGCCTAGCCCTCCGGCTTTCTGAGGCCCAGTGTTAATATCATGCACCTGAGCCTTCTATAGGGGAGGCTCTCAGTTAGTGGCTCAATGTCCATGGTCGCCAAATACTG\tT\t.\tPASS\tAC=1589;AF=0.317292;AFR_AF=0.1074;AMR_AF=0.3228;AN=5008;CS=DEL_pindel;EAS_AF=0.3472;END=33751766;EUR_AF=0.4911;NS=2504;SAS_AF=0.3875;SITEPOST=0.9996;SVTYPE=DEL\tGT\t1|0\n22\t34430612\tALU_umary_ALU_12486\tT\t<INS:ME:ALU>\t.\t.\tAC=2201;AF=0.439497;AFR_AF=0.2118;AMR_AF=0.4741;AN=5008;CS=ALU_umary;EAS_AF=0.5188;EUR_AF=0.5626;MEINFO=AluUndef,1,267,-;NS=2504;SAS_AF=0.5143;SITEPOST=1;SVLEN=266;SVTYPE=ALU;TSD=CAAATGGAACTTTT\tGT\t1|1\n22\t35645163\tBI_GS_DEL1_B1_P2881_680\tT\t<CN0>\t100\tPASS\tAC=2311;AF=0.461462;AFR_AF=0.0726;AMR_AF=0.6081;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.5238;END=35646142;EUR_AF=0.6809;MC=SI_BD_17674,YL_CN_CHB_4466,YL_CN_KHV_4823;NS=2504;SAS_AF=0.593;SVTYPE=DEL\tGT\t1|0\n22\t37124157\tDEL_pindel_52477\tTGTGTGTGTGTCCATGTGTGTGCATGTGTGTGTGGACATGTACATATGTGTATGTGTGCCTGTGCATGTGTGGGCAGTGTGTGCATGTACATGTGTGCATGC\tT\t.\tPASS\tAC=1448;AF=0.289137;AFR_AF=0.1974;AMR_AF=0.3012;AN=5008;CS=DEL_pindel;EAS_AF=0.3542;END=37124258;EUR_AF=0.335;NS=2504;SAS_AF=0.2904;SITEPOST=0.9982;SVTYPE=DEL\tGT\t0|1\n22\t37127073\tDEL_pindel_52478\tTTGTTTTTTGTTTTTTTTTATTTTTTTTTATTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGCGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGG\tT\t.\tPASS\tAC=3270;AF=0.652955;AFR_AF=0.584;AMR_AF=0.6844;AN=5008;CS=DEL_pindel;EAS_AF=0.6845;END=37127245;EUR_AF=0.67;MEINFO=AluY,156,281,-;NS=2504;SAS_AF=0.6738;SITEPOST=0.966;SVTYPE=DEL_ALU\tGT\t0|1\n22\t37143062\tYL_CN_GIH_3320\tG\t<CN0>\t100\tPASS\tAC=2987;AF=0.596446;AFR_AF=0.2315;AMR_AF=0.7277;AN=5008;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0.8562;END=37147890;EUR_AF=0.7237;MC=UW_VH_6519,YL_CN_YRI_5400,UW_VH_4985,UW_VH_23907,UW_VH_21095,SI_BD_17691,EM_DL_DEL61999,UW_VH_25177,BI_GS_DEL1_B1_P2883_151,UW_VH_7802,UW_VH_4503,UW_VH_5582,UW_VH_4726,UW_VH_51,UW_VH_9812,UW_VH_16148;NS=2504;SAS_AF=0.5982;SVTYPE=DEL\tGT\t1|1\n22\t37143105\tSI_BD_17690\tG\t<CN0>\t100\tPASS\tAC=3070;AF=0.613019;AFR_AF=0.2935;AMR_AF=0.7334;AN=5008;CIEND=-71,184;CIPOS=-184,50;CS=DEL_union;EAS_AF=0.8552;END=37144405;EUR_AF=0.7227;MC=BI_GS_DEL1_B3_P2883_8;NS=2504;SAS_AF=0.5971;SVTYPE=DEL\tGT\t1|1\n22\t42140478\tDEL_pindel_52594\tGCTATGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCTCTACGCCCGGCTAATTTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCTTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGC\tG\t.\tPASS\tAC=3581;AF=0.715056;AFR_AF=0.8162;AMR_AF=0.536;AN=5008;CS=DEL_pindel;EAS_AF=0.7927;END=42140800;EUR_AF=0.6889;MEINFO=AluYa5,2,281,-;NS=2504;SAS_AF=0.6524;SITEPOST=0.9893;SVTYPE=DEL_ALU\tGT\t1|1\n22\t42717347\tBI_GS_DEL1_B5_P2888_704\tG\t<CN0>\t100\tPASS\tAC=45;AF=0.00898562;AFR_AF=0;AMR_AF=0.0101;AN=5008;CIEND=-15,15;CIPOS=-15,15;CS=DEL_union;EAS_AF=0;END=42719846;EUR_AF=0.0378;MC=UW_VH_2910;NS=2504;SAS_AF=0;SVTYPE=DEL\tGT\t1|0\n22\t43985160\tDEL_pindel_52625\tCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAAGTACAG\tC\t.\tPASS\tAC=1465;AF=0.292532;AFR_AF=0.0719;AMR_AF=0.464;AN=5008;CS=DEL_pindel;EAS_AF=0.5704;END=43985210;EUR_AF=0.2346;NS=2504;SAS_AF=0.2423;SITEPOST=0.9998;SVTYPE=DEL\tGT\t0|1\n22\t44324605\tL1_umary_LINE1_2991\tC\t<INS:ME:LINE1>\t.\t.\tAC=942;AF=0.188099;AFR_AF=0.0734;AMR_AF=0.183;AN=5008;CS=L1_umary;EAS_AF=0.1845;EUR_AF=0.34;MEINFO=LINE1,4969,5986,-;NS=2504;SAS_AF=0.1943;SITEPOST=1;SVLEN=1017;SVTYPE=LINE1;TSD=TGCAAAGGGCATTTTC\tGT\t0|1\n22\t45252401\tBI_GS_DEL1_B5_P2891_217\tG\t<CN0>\t100\tPASS\tAC=727;AF=0.145168;AFR_AF=0.3177;AMR_AF=0.0677;AN=5008;CIEND=0,1;CIPOS=0,1;CS=DEL_union;EAS_AF=0.0665;END=45253090;EUR_AF=0.1173;MC=UW_VH_2433;NS=2504;SAS_AF=0.0767;SVTYPE=DEL\tGT\t1|0\n22\t47696468\tBI_GS_DEL1_B3_P2893_37\tA\t<CN0>\t100\tPASS\tAC=1200;AF=0.239617;AFR_AF=0.5734;AMR_AF=0.1499;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.0635;END=47696864;EUR_AF=0.172;MC=BI_GS_DEL1_B1_P2893_606,DEL_pindel_52724;NS=2504;SAS_AF=0.1033;SVTYPE=DEL\tGT\t1|0\n22\t48645210\tDEL_pindel_52741\tTAAGATTGCGCCTTGGGCCGGGCACGGTGGCTCACTCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTATAACGGTGAATCCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAACAAAAAAAA\tT\t.\tPASS\tAC=2639;AF=0.526957;AFR_AF=0.4387;AMR_AF=0.5663;AN=5008;CS=DEL_pindel;EAS_AF=0.4613;END=48645528;EUR_AF=0.6103;MEINFO=AluYa5,1,281,+;NS=2504;SAS_AF=0.6002;SITEPOST=0.9986;SVTYPE=DEL_ALU\tGT\t1|1\n22\t49077605\tBI_GS_DEL1_B1_P2895_53\tA\t<CN0>\t100\tPASS\tAC=1548;AF=0.309105;AFR_AF=0.2035;AMR_AF=0.3256;AN=5008;CIEND=-1,2;CIPOS=-1,2;CS=DEL_union;EAS_AF=0.1726;END=49077889;EUR_AF=0.4622;MC=UW_VH_1653,DEL_pindel_52769;NS=2504;SAS_AF=0.4233;SVTYPE=DEL\tGT\t1|1\n22\t49425473\tSVA_umary_SVA_833\tC\t<INS:ME:SVA>\t.\t.\tAC=2521;AF=0.503395;AFR_AF=0.4425;AMR_AF=0.5807;AN=5008;CS=SVA_umary;EAS_AF=0.505;EUR_AF=0.5348;MEINFO=SVA,5,1627,+;NS=2504;SAS_AF=0.4969;SITEPOST=1;SVLEN=1622;SVTYPE=SVA;TSD=AAGAAAACTCCTTGCTC\tGT\t0|1\n22\t49750824\tDEL_pindel_52814\tTGTGATTAAACCCTGAAGGATCCCTGTAAAGGGTCCAACTGGGGTGACCACACAGTGC\tT\t.\tPASS\tAC=718;AF=0.143371;AFR_AF=0.0287;AMR_AF=0.1354;AN=5008;CS=DEL_pindel;EAS_AF=0.3075;END=49750881;EUR_AF=0.1292;NS=2504;SAS_AF=0.1493;SITEPOST=0.9916;SVTYPE=DEL\tGT\t0|1\n22\t50273378\tALU_umary_ALU_12536\tT\t<INS:ME:ALU>\t.\t.\tAC=1482;AF=0.295927;AFR_AF=0.0847;AMR_AF=0.3847;AN=5008;CS=ALU_umary;EAS_AF=0.4038;EUR_AF=0.4105;MEINFO=AluUndef,1,278,-;NS=2504;SAS_AF=0.2894;SITEPOST=1;SVLEN=277;SVTYPE=ALU;TSD=GTCTGGGCCTGTTT\tGT\t0|1\n22\t50664005\tDEL_pindel_52851\tGCTCCCCCTTGGCACCCACCCTTCATCTCAACTCCCCGTTGACACCCACCCTTCATCTCAA\tG\t.\tPASS\tAC=664;AF=0.132588;AFR_AF=0.149;AMR_AF=0.0692;AN=5008;CS=DEL_pindel;EAS_AF=0.0873;END=50664065;EUR_AF=0.1322;NS=2504;SAS_AF=0.2025;SITEPOST=0.9985;SVTYPE=DEL\tGT\t0|1\nX\t61438\tBI_GS_DEL1_B1_P2898_3\tA\t<CN0>\t100\tPASS\tAC=307;AF=0.134185;AFR_AF=0.171;AMR_AF=0.0389;AN=2542;CIEND=0,1;CIPOS=0,1;CS=DEL_union;EAS_AF=0.1766;END=61910;EUR_AF=0.0378;MC=UW_VH_1291;NS=2504;SAS_AF=0.2076;SVTYPE=DEL\tGT\t.\nX\t163196\tBI_GS_DEL1_B4_P2898_4\tA\t<CN0>\t100\tPASS\tAC=4;AF=0.00139776;AFR_AF=0.0023;AMR_AF=0;AN=2542;CIEND=-61,61;CIPOS=-61,61;CS=DEL_union;EAS_AF=0;END=182825;EUR_AF=0.002;NS=2504;SAS_AF=0.002;SVTYPE=DEL\tGT\t.\nX\t192421\tBI_GS_DEL1_B3_P2898_9\tA\t<CN0>\t100\tPASS\tAC=5;AF=0.00139776;AFR_AF=0.0015;AMR_AF=0;AN=2542;CIEND=-25,26;CIPOS=-25,26;CS=DEL_union;EAS_AF=0;END=212051;EUR_AF=0.003;MC=YL_CN_ESN_4304,YL_CN_STU_4477,BI_GS_DEL1_B3_P2898_11;NS=2504;SAS_AF=0.002;SVTYPE=DEL\tGT\t.\nX\t195224\tBI_GS_DEL1_B4_P2898_9\tG\t<CN0>\t100\tPASS\tAC=1;AF=0.00019968;AFR_AF=0;AMR_AF=0;AN=2542;CIEND=-75,75;CIPOS=-75,75;CS=DEL_union;EAS_AF=0.001;END=198275;EUR_AF=0;NS=2504;SAS_AF=0;SVTYPE=DEL\tGT\t.\nX\t209510\tUW_VH_11361\tC\t<CN0>\t100\tPASS\tAC=3;AF=0.00059904;AFR_AF=0;AMR_AF=0;AN=2542;CIEND=0,369;CIPOS=-259,0;CS=DEL_union;EAS_AF=0;END=221124;EUR_AF=0.003;MC=BI_GS_DEL1_B2_P2898_19;NS=2504;SAS_AF=0;SVTYPE=DEL\tGT\t.\nX\t288023\tUW_VH_24597\tT\t<CN0>\t100\tPASS\tAC=14;AF=0.00459265;AFR_AF=0.0174;AMR_AF=0;AN=2542;CIEND=0,135;CIPOS=-150,0;CS=DEL_union;EAS_AF=0;END=290864;EUR_AF=0;NS=2504;SAS_AF=0;SVTYPE=DEL\tGT\t.\nX\t351731\tBI_GS_DEL1_B1_P2898_55\tG\t<CN0>\t100\tPASS\tAC=2;AF=0.00059904;AFR_AF=0;AMR_AF=0;AN=2542;CIEND=-3,4;CIPOS=-3,4;CS=DEL_union;EAS_AF=0;END=353424;EUR_AF=0.003;NS=2504;SAS_AF=0;SVTYPE=DEL\tGT\t.\nX\t358103\tBI_GS_DEL1_B4_P2898_27\tA\t<CN0>\t100\tPASS\tAC=5;AF=0.00139776;AFR_AF=0.0015;AMR_AF=0;AN=2542;CIEND=-52,53;CIPOS=-52,53;CS=DEL_union;EAS_AF=0;END=418783;EUR_AF=0.003;MC=UW_VH_19586;NS=2504;SAS_AF=0.002;SVTYPE=DEL\tGT\t.\nX\t369994\tYL_CN_ACB_4935\tA\t<CN0>\t100\tPASS\tAC=5;AF=0.00119808;AFR_AF=0.0015;AMR_AF=0;AN=2542;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0;END=394320;EUR_AF=0.002;NS=2504;SAS_AF=0.002;SVTYPE=DEL\tGT\t.\nX\t378345\tBI_GS_DEL1_B5_P2898_85\tG\t<CN0>\t100\tPASS\tAC=1;AF=0.00019968;AFR_AF=0;AMR_AF=0.0014;AN=2542;CIEND=-59,59;CIPOS=-59,59;CS=DEL_union;EAS_AF=0;END=384651;EUR_AF=0;NS=2504;SAS_AF=0;SVTYPE=DEL\tGT\t.\nX\t399249\tBI_GS_DEL1_B5_P2898_95\tT\t<CN0>\t100\tPASS\tAC=601;AF=0.233826;AFR_AF=0.4402;AMR_AF=0.1196;AN=2542;CIEND=-7,8;CIPOS=-7,8;CS=DEL_union;EAS_AF=0.1399;END=399872;EUR_AF=0.0934;MC=UW_VH_2274;NS=2504;SAS_AF=0.2771;SVTYPE=DEL\tGT\t.\nX\t434172\tBI_GS_DEL1_B5_P2898_114\tG\t<CN0>\t100\tPASS\tAC=6;AF=0.00179712;AFR_AF=0.0015;AMR_AF=0;AN=2542;CIEND=-8,8;CIPOS=-8,8;CS=DEL_union;EAS_AF=0;END=438430;EUR_AF=0;NS=2504;SAS_AF=0.0072;SVTYPE=DEL\tGT\t.\nX\t582189\tBI_GS_DEL1_B4_P2898_66\tA\t<CN0>\t100\tPASS\tAC=1;AF=0.00059904;AFR_AF=0.0008;AMR_AF=0;AN=2542;CIEND=-19,19;CIPOS=-19,19;CS=DEL_union;EAS_AF=0.002;END=589559;EUR_AF=0;NS=2504;SAS_AF=0;SVTYPE=DEL\tGT\t.\nX\t626635\tBI_GS_DEL1_B5_P2898_225\tC\t<CN0>\t100\tPASS\tAC=26;AF=0.0101837;AFR_AF=0.0272;AMR_AF=0.0029;AN=2542;CIEND=-2,3;CIPOS=-2,3;CS=DEL_union;EAS_AF=0;END=627257;EUR_AF=0;MC=UW_VH_7720;NS=2504;SAS_AF=0.0133;SVTYPE=DEL\tGT\t.\nX\t634214\tUW_VH_18310\tG\t<CN0>\t100\tPASS\tAC=7;AF=0.00219649;AFR_AF=0.0015;AMR_AF=0;AN=2542;CIEND=0,226;CIPOS=-241,0;CS=D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2504;SAS_AF=0;SVTYPE=DEL\tGT\t.\nX\t2917491\tUW_VH_6755\tT\t<CN0>\t100\tPASS\tAC=14;AF=0.00688742;AFR_AF=0.005;AMR_AF=0;AN=2542;CIEND=0,300;CIPOS=-280,0;CS=DEL_union;EAS_AF=0.0092;END=2921551;EUR_AF=0.0157;MC=BI_GS_DEL1_B1_P2900_554,YL_CN_CHS_4677;NS=2504;SAS_AF=0.0028;SVTYPE=DEL\tGT\t.\nX\t2947858\tDUP_gs.X_CNV_X_2947858_2957494\tC\t<CN0>,<CN2>\t.\tPASS\tAC=0,1;AF=0,0.0002649;AFR_AF=0,0;AMR_AF=0,0;AN=3775;CS=DUP_gs;EAS_AF=0,0;END=2957494;EUR_AF=0,0;NS=2504;SAS_AF=0,0.0014;SVTYPE=DUP\tGT\t0\nX\t3011110\tBI_GS_DEL1_B2_P2901_5\tG\t<CN0>\t100\tPASS\tAC=8;AF=0.00238411;AFR_AF=0.003;AMR_AF=0;AN=2542;CIEND=-33,33;CIPOS=-33,33;CS=DEL_union;EAS_AF=0.0026;END=3020851;EUR_AF=0.0052;MC=YL_CN_KHV_4955;NS=2504;SAS_AF=0;SVTYPE=DEL\tGT\t.\nX\t3064239\tALU_umary_ALU_12548\tA\t<INS:ME:ALU>\t.\tPASS\tAC=766;AF=0.202914;AFR_AF=0.2841;AMR_AF=0.1527;AN=3775;CS=ALU_umary;EAS_AF=0.284;EUR_AF=0.124;MEINFO=AluUndef,1,277,-;NS=2504;SAS_AF=0.124;SVLEN=276;SVTYPE=ALU;TSD=AAAAGAAAAAGAAAGA\tGT\t0\nX\t3150625\tNUMT_umich_MERGED_NUMT_201\tT\t<INS:MT>\t.\tPASS\tAC=2;AF=0.0005298;AFR_AF=0.002;AMR_AF=0;AN=3775;CIEND=-3,0;CIPOS=0,3;CS=NUMT_umich;EAS_AF=0;END=3150627;EUR_AF=0;NS=2504;SAS_AF=0;SVTYPE=INS\tGT\t0\nX\t3185852\tUW_VH_9435\tT\t<CN0>\t100\tPASS\tAC=12;AF=0.010596;AFR_AF=0.013;AMR_AF=0.0057;AN=2542;CIEND=0,271;CIPOS=-239,0;CS=DEL_union;EAS_AF=0.0079;END=3187996;EUR_AF=0.0196;MC=BI_GS_DEL1_B3_P2901_9,YL_CN_MSL_3977;NS=2504;SAS_AF=0.0042;SVTYPE=DEL\tGT\t.\nX\t3294909\tBI_GS_DEL1_B1_P2901_215\tT\t<CN0>\t100\tPASS\tAC=277;AF=0.264371;AFR_AF=0.2722;AMR_AF=0.2844;AN=2542;CIEND=-2,2;CIPOS=-2,2;CS=DEL_union;EAS_AF=0.2592;END=3295535;EUR_AF=0.2507;NS=2504;SAS_AF=0.2591;SVTYPE=DEL\tGT\t.\nX\t3326031\tEM_DL_DEL103976\tG\t<CN0>\t100\tPASS\tAC=7;AF=0.00317881;AFR_AF=0.003;AMR_AF=0.0019;AN=2542;CIEND=-150,150;CIPOS=-150,150;CS=DEL_union;EAS_AF=0.0052;END=3329216;EUR_AF=0.0052;NS=2504;SAS_AF=0;SVTYPE=DEL\tGT\t.\nX\t3346301\tUW_VH_10697\tT\t<CN0>\t100\tPASS\tAC=9;AF=0.00238411;AFR_AF=0.003;AMR_AF=0.0038;AN=2542;CIEND=0,85;CIPOS=-72,0;CS=DEL_union;EAS_AF=0;END=3351906;EUR_AF=0.0052;NS=2504;SAS_AF=0;SVTYPE=DEL\tGT\t.\nX\t3484352\tDUP_gs.X_CNV_X_3484352_3558867\tG\t<CN0>,<CN2>\t.\tPASS\tAC=0,2;AF=0,0.0005298;AFR_AF=0,0;AMR_AF=0,0;AN=3775;CS=DUP_gs;EAS_AF=0,0;END=3558867;EUR_AF=0,0;NS=2504;SAS_AF=0,0.0028;SVTYPE=DUP\tGT\t0\nX\t3511628\tL1_umary_LINE1_2995\tC\t<INS:ME:LINE1>\t.\tPASS\tAC=1;AF=0.0002649;AFR_AF=0.001;AMR_AF=0;AN=3775;CS=L1_umary;EAS_AF=0;EUR_AF=0;MEINFO=LINE1,2509,4433,-;NS=2504;SAS_AF=0;SVLEN=1924;SVTYPE=LINE1;TSD=null\tGT\t0\nX\t3599706\tALU_umary_ALU_12549\tT\t<INS:ME:ALU>\t.\tPASS\tAC=378;AF=0.100132;AFR_AF=0.0349;AMR_AF=0.0344;AN=3775;CS=ALU_umary;EAS_AF=0.1885;EUR_AF=0.0822;MEINFO=AluUndef,59,281,-;NS=2504;SAS_AF=0.1643;SVLEN=222;SVTYPE=ALU;TSD=TT\tGT\t0\nX\t3606235\tBI_GS_DEL1_B2_P2901_246\tC\t<CN0>\t100\tPASS\tAC=715;AF=0.415894;AFR_AF=0.317;AMR_AF=0.313;AN=2542;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.5733;END=3606653;EUR_AF=0.3851;NS=2504;SAS_AF=0.4944;SVTYPE=DEL\tGT\t.\nX\t3609471\tDEL_pindel_52988\tCCCGGGGGAGTGGGCTACATTACATTCTACCTTCAAGAAAAATAACAATTTTTCGA\tC\t.\tPASS\tAC=2282;AF=0.604503;AFR_AF=0.6261;AMR_AF=0.6069;AN=3775;CS=DEL_pindel;EAS_AF=0.4804;END=3609526;EUR_AF=0.6736;NS=2504;SAS_AF=0.6309;SVTYPE=DEL\tGT\t1\nX\t3687415\tBI_GS_DEL1_B5_P2901_523\tG\t<CN0>\t100\tPASS\tAC=10;AF=0.00291391;AFR_AF=0.006;AMR_AF=0.0019;AN=2542;CIEND=-1,2;CIPOS=-1,2;CS=DEL_union;EAS_AF=0;END=3703428;EUR_AF=0.0052;MC=YL_CN_LWK_4127;NS=2504;SAS_AF=0;SVTYPE=DEL\tGT\t.\nX\t3703420\tBI_GS_DEL1_B3_P2901_24\tA\t<CN0>\t100\tPASS\tAC=13;AF=0.00397351;AFR_AF=0.011;AMR_AF=0.0019;AN=2542;CIEND=0,1;CIPOS=0,1;CS=DEL_union;EAS_AF=0;END=3718736;EUR_AF=0.0039;MC=YL_CN_MSL_3978,EM_DL_DEL103986,UW_VH_15773;NS=2504;SAS_AF=0;SVTYPE=DEL\tGT\t.\nX\t3731706\tDUP_gs.X_CNV_X_3731706_3739682\tT\t<CN0>,<CN2>\t.\tPASS\tAC=5,12;AF=0.0013245,0.00317881;AFR_AF=0.005,0.01;AMR_AF=0,0.0019;AN=3775;CS=DUP_gs;EAS_AF=0,0;END=3739682;EUR_AF=0,0;NS=2504;SAS_AF=0,0.0014;SVTYPE=CNV\tGT\t0\nX\t3735212\tDUP_gs.X_CNV_X_3735212_3745961\tG\t<CN0>,<CN2>\t.\tPASS\tAC=1,11;AF=0.0002649,0.00291391;AFR_AF=0,0.011;AMR_AF=0,0;AN=3775;CS=DUP_gs;EAS_AF=0,0;END=3745961;EUR_AF=0,0;NS=2504;SAS_AF=0.0014,0;SVTYPE=CNV\tGT\t0\nX\t3879103\tL1_umary_LINE1_2996\tT\t<INS:ME:LINE1>\t.\tPASS\tAC=27;AF=0.00715232;AFR_AF=0.0209;AMR_AF=0.0095;AN=3775;CS=L1_umary;EAS_AF=0.0013;EUR_AF=0;MEINFO=LINE1,1,6019,-;NS=2504;SAS_AF=0;SVLEN=6018;SVTYPE=LINE1;TSD=null\tGT\t0\nX\t3973863\tDEL_pindel_52995\tGATAAAATTTTAAACTGACAGTAAGAGTGGCAAGAACAGTATGGGGAAACGCTAC\tG\t.\tPASS\tAC=528;AF=0.139868;AFR_AF=0.1047;AMR_AF=0.126;AN=3775;CS=DEL_pindel;EAS_AF=0.1911;END=3973917;EUR_AF=0.1227;NS=2504;SAS_AF=0.163;SVTYPE=DEL\tGT\t0\nX\t3982951\tUW_VH_20248\tG\t<CN0>\t100\tPASS\tAC=7;AF=0.00211921;AFR_AF=0.004;AMR_AF=0;AN=2542;CIEND=0,269;CIPOS=-270,0;CS=DEL_union;EAS_AF=0;END=3990937;EUR_AF=0.0052;MC=YL_CN_ACB_5013,BI_GS_DEL1_B4_P2901_93;NS=2504;SAS_AF=0;SVTYPE=DEL\tGT\t.\nX\t4025923\tDEL_pindel_52997\tATGGCCCCCAAAGATGCCCACATCTTAATCCCCACATGGTAGACGAAATAAT\tA\t.\tPASS\tAC=1234;AF=0.326887;AFR_AF=0.3101;AMR_AF=0.3359;AN=3775;CS=DEL_pindel;EAS_AF=0.3089;END=4025974;EUR_AF=0.3303;NS=2504;SAS_AF=0.3593;SVTYPE=DEL\tGT\t1\nX\t4055996\tALU_umary_ALU_12550\tT\t<INS:ME:ALU>\t.\tPASS\tAC=26;AF=0.00688742;AFR_AF=0.0259;AMR_AF=0;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0;MEINFO=AluYa4_5,1,281,-;NS=2504;SAS_AF=0;SVLEN=280;SVTYPE=ALU;TSD=CAGTCGTATTTTT\tGT\t0\nX\t4116403\tDEL_pindel_52998\tCAATAGGTAATTTTTTAATTCTCTCCCTCCTCCCACCCTTCACCCTCAAGTAGACCCTTCTGTCTGTTGTTCCCTTCTTTGTGTCCACGTGTGCTCAATGTTTCGATCCCACTTAT\tC\t.\tPASS\tAC=1285;AF=0.340397;AFR_AF=0.334;AMR_AF=0.313;AN=3775;CS=DEL_pindel;EAS_AF=0.3639;END=4116518;EUR_AF=0.3068;NS=2504;SAS_AF=0.3802;SVTYPE=DEL\tGT\t1\nX\t4135699\tDEL_pindel_53000\tGTACTTCATTTTTTTTTTGTTTTTTTCAAATGAGCAATTGGGTTTTCAAGTAGTGAGTTCAGGGGTCTAACACTGGATAAAGACAGGTTTTTTTGTTTGTTTTTGTTTCATCCAAT\tG\t.\tPASS\tAC=1255;AF=0.33245;AFR_AF=0.3649;AMR_AF=0.3092;AN=3775;CS=DEL_pindel;EAS_AF=0.305;END=4135814;EUR_AF=0.3107;NS=2504;SAS_AF=0.3565;SVTYPE=DEL\tGT\t1\nX\t4172222\tALU_umary_ALU_12551\tT\t<INS:ME:ALU>\t.\tPASS\tAC=1;AF=0.0002649;AFR_AF=0.001;AMR_AF=0;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0;MEINFO=AluYa1_1,8,281,-;NS=2504;SAS_AF=0;SVLEN=273;SVTYPE=ALU;TSD=null\tGT\t0\nX\t4233776\tBI_GS_DEL1_B5_P2902_210\tT\t<CN0>\t100\tPASS\tAC=241;AF=0.198146;AFR_AF=0.2961;AMR_AF=0.1508;AN=2542;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.1767;END=4234935;EUR_AF=0.1397;MC=UW_VH_8374;NS=2504;SAS_AF=0.1811;SVTYPE=DEL\tGT\t.\nX\t4234416\tDEL_pindel_53002\tAATTTTTATTTTTTATTTTTTAAATTTATTTTTCCTACACAGAAGTCTTTGTCAAAGCTGCGTTTATTGGTGGAAGAAATGAATTTTTGAGGTGTCTCTTTGTTTTGCAAAGTGATGACAGGGAAACAAAGATCAACCAAAGCACTTTTGAAAAATTTGGCAACCCCACTTCTAAGAATGAGGCCAGGTTGGGCTGAGAACCCTCATTCCAGGGAAACTAGTGGGTGACCGAGTTGAGTGGCTATAATCACTTCAGTCCAGGAAAAGCAGTCAATGAGAGAGATGTTCTGCCATGATCACCTCTATCCAGGGAAACTAATCCATGGTGGAGATGGTGGTCCCTGATCACTTCAGCCCTGGAAAAGCAGTCCATAATCACTAAGGCAGGCTGTGCTTGCTTCGGCCCAGGGGACACAATGATGAGGGACCTAGAATGTTTATTCCTAGTTGATGATAAGTGCACATAGTTACTTGAGTTACTCATTTTCAGAAAGGTTTATGCCTGCTTAGAAAAAATTCTCATGTTTAAGAAAACGTGTAGGATCAGTAGTATGTGAGTGGGCTTTCTGTTGTTGGATCTCTATAATTTTGAACTTTTGCATTCAATCAGGGAGGGTTACTGTAGGCCAAACCTCCAGTGAAGGCTGGTTCTGTGTTTTTCCATGGTATTGATTGTG\tA\t.\tPASS\tAC=915;AF=0.242384;AFR_AF=0.2363;AMR_AF=0.2328;AN=3775;CS=DEL_pindel;EAS_AF=0.2474;END=4235092;EUR_AF=0.235;NS=2504;SAS_AF=0.2604;SVTYPE=DEL\tGT\t1\nX\t4236802\tUW_VH_14867\tT\t<CN0>\t100\tPASS\tAC=20;AF=0.00768212;AFR_AF=0.0199;AMR_AF=0.0076;AN=2542;CIEND=0,301;CIPOS=-196,0;CS=DEL_union;EAS_AF=0;END=4251464;EUR_AF=0.0065;MC=BI_GS_DEL1_B3_P2902_13,YL_CN_ASW_4496;NS=2504;SAS_AF=0;SVTYPE=DEL\tGT\t.\nX\t4327018\tALU_umary_ALU_12552\tT\t<INS:ME:ALU>\t.\tPASS\tAC=74;AF=0.0196027;AFR_AF=0.0668;AMR_AF=0.0134;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0;MEINFO=AluYb5,10,269,-;NS=2504;SAS_AF=0;SVLEN=259;SVTYPE=ALU;TSD=CACCACAGTATTTATT\tGT\t0\nX\t4379954\tDEL_pindel_53006\tGAAGTCATTGTACAAGGAAAACATTCTGTATGCACTAAGATTTCCCAAAAGAT\tG\t.\tPASS\tAC=1605;AF=0.425166;AFR_AF=0.326;AMR_AF=0.4332;AN=3775;CS=DEL_pindel;EAS_AF=0.3783;END=4380006;EUR_AF=0.5744;NS=2504;SAS_AF=0.4485;SVTYPE=DEL\tGT\t1\nX\t4382172\tUW_VH_22178\tT\t<CN0>\t100\tPASS\tAC=9;AF=0.00238411;AFR_AF=0.004;AMR_AF=0.0019;AN=2542;CIEND=0,174;CIPOS=-219,0;CS=DEL_union;EAS_AF=0;END=4392070;EUR_AF=0.0052;MC=BI_GS_DEL1_B5_P2902_330;NS=2504;SAS_AF=0;SVTYPE=DEL\tGT\t.\nX\t4659604\tL1_umary_LINE1_2997\tT\t<INS:ME:LINE1>\t.\tPASS\tAC=431;AF=0.114172;AFR_AF=0.2443;AMR_AF=0.1412;AN=3775;CS=L1_umary;EAS_AF=0.0223;EUR_AF=0.1057;MEINFO=LINE1,4569,6014,-;NS=2504;SAS_AF=0.0195;SVLEN=1445;SVTYPE=LINE1;TSD=TT\tGT\t0\nX\t4718495\tALU_umary_ALU_12553\tC\t<INS:ME:ALU>\t.\tPASS\tAC=9;AF=0.00238411;AFR_AF=0.009;AMR_AF=0;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0;MEINFO=AluYc1,2,281,+;NS=2504;SAS_AF=0;SVLEN=279;SVTYPE=ALU;TSD=null\tGT\t0\nX\t4763225\tBI_GS_DEL1_B2_P2902_330\tG\t<CN0>\t100\tPASS\tAC=9;AF=0.00291391;AFR_AF=0.005;AMR_AF=0.0019;AN=2542;CIEND=-31,32;CIPOS=-31,32;CS=DEL_union;EAS_AF=0.0013;END=4782111;EUR_AF=0.0052;MC=YL_CN_LWK_4136,UW_VH_22532,UW_VH_13534;NS=2504;SAS_AF=0;SVTYPE=DEL\tGT\t.\nX\t4916708\tALU_umary_ALU_12554\tT\t<INS:ME:ALU>\t.\tPASS\tAC=70;AF=0.018543;AFR_AF=0.0199;AMR_AF=0.0229;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0.0366;MEINFO=AluUndef,1,268,-;NS=2504;SAS_AF=0.0139;SVLEN=267;SVTYPE=ALU;TSD=ACATCTTAGATTCTTCTT\tGT\t0\nX\t4952559\tBI_GS_DEL1_B3_P2902_37\tT\t<CN0>\t100\tPASS\tAC=8;AF=0.00476821;AFR_AF=0.008;AMR_AF=0.0019;AN=2542;CIEND=-12,13;CIPOS=-12,13;CS=DEL_union;EAS_AF=0;END=4956915;EUR_AF=0.0091;MC=YL_CN_GWD_5791,UW_VH_16447;NS=2504;SAS_AF=0.0028;SVTYPE=DEL\tGT\t.\nX\t4953842\tALU_umary_ALU_12555\tT\t<INS:ME:ALU>\t.\tPASS\tAC=107;AF=0.0283444;AFR_AF=0.0528;AMR_AF=0.0382;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0.03;MEINFO=AluUndef,4,274,-;NS=2504;SAS_AF=0.0153;SVLEN=270;SVTYPE=ALU;TSD=TTAAATGTTT\tGT\t0\nX\t5055345\tBI_GS_DEL1_B1_P2903_17\tT\t<CN0>\t100\tPASS\tAC=1949;AF=0.766887;AFR_AF=0.7976;AMR_AF=0.9389;AN=2542;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.4136;END=5057501;EUR_AF=0.8916;MC=YL_CN_CHS_4683,YL_CN_ITU_4627,UW_VH_2184,YL_CN_CEU_5383,EM_DL_DEL104008,YL_CN_CDX_3789,YL_CN_MSL_3982;NS=2504;SAS_AF=0.8412;SVTYPE=DEL\tGT\t.\nX\t5159449\tUW_VH_2773\tT\t<CN0>\t100\tPASS\tAC=81;AF=0.032053;AFR_AF=0.003;AMR_AF=0.0363;AN=2542;CIEND=0,327;CIPOS=-291,0;CS=DEL_union;EAS_AF=0;END=5164202;EUR_AF=0.107;MC=BI_GS_DEL1_B5_P2903_114,EM_DL_DEL104012,YL_CN_ITU_4628,YL_CN_MXL_3707;NS=2504;SAS_AF=0.0237;SVTYPE=DEL\tGT\t.\nX\t5206767\tDEL_pindel_53019\tTACAGAGTGCTGATTGGTCCATTTTTACAGAGTGCTGATTGGTGCATTTACAATCTTTTAGCTAGAC\tT\t.\tPASS\tAC=332;AF=0.087947;AFR_AF=0.0788;AMR_AF=0.0916;AN=3775;CS=DEL_pindel;EAS_AF=0.0982;END=5206833;EUR_AF=0.1084;NS=2504;SAS_AF=0.0655;SVTYPE=DEL\tGT\t0\nX\t5361806\tBI_GS_DEL1_B4_P2903_41\tA\t<CN0>\t100\tPASS\tAC=32;AF=0.0487417;AFR_AF=0.0568;AMR_AF=0.0324;AN=2542;CIEND=-3,4;CIPOS=-3,4;CS=DEL_union;EAS_AF=0.0471;END=5363114;EUR_AF=0.0574;MC=UW_VH_12101;NS=2504;SAS_AF=0.0418;SVTYPE=DEL\tGT\t.\nX\t5449318\tDUP_gs.X_CNV_X_5449318_5477338\tT\t<CN0>,<CN2>\t.\tPASS\tAC=0,4;AF=0,0.0010596;AFR_AF=0,0;AMR_AF=0,0;AN=3775;CS=DUP_gs;EAS_AF=0,0;END=5477338;EUR_AF=0,0;NS=2504;SAS_AF=0,0.0056;SVTYPE=DUP\tGT\t0\nX\t5481647\tYL_CN_CLM_3811\tT\t<CN0>\t100\tPASS\tAC=9;AF=0.00264901;AFR_AF=0.002;AMR_AF=0.0057;AN=2542;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0;END=5496689;EUR_AF=0.0065;MC=BI_GS_DEL1_B5_P2903_377;NS=2504;SAS_AF=0;SVTYPE=DEL\tGT\t.\nX\t5538006\tDEL_pindel_53027\tTCAAATGCATAAAGTAAAATCTAACAGTTTGGAAAGAAGAAATAAGCAAATCTAAAATTG\tT\t.\tPASS\tAC=525;AF=0.139073;AFR_AF=0.1157;AMR_AF=0.1202;AN=3775;CS=DEL_pindel;EAS_AF=0.1728;END=5538065;EUR_AF=0.1384;NS=2504;SAS_AF=0.1504;SVTYPE=DEL\tGT\t1\nX\t5570336\tDEL_pindel_53028\tCAATACCACCGAAGAGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGTGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAATAAAAATAAAAATAAAATAAAAAATAAAAAATAAAATAAAA\tC\t.\tPASS\tAC=2412;AF=0.63894;AFR_AF=0.6281;AMR_AF=0.6298;AN=3775;CS=DEL_pindel;EAS_AF=0.606;END=5570680;EUR_AF=0.6227;MEINFO=AluYa5,1,281,+;NS=2504;SAS_AF=0.7131;SVTYPE=DEL_ALU\tGT\t0\nX\t5653213\tUW_VH_21209\tG\t<CN0>\t100\tPASS\tAC=48;AF=0.108344;AFR_AF=0.0937;AMR_AF=0.1069;AN=2542;CIEND=0,186;CIPOS=-161,0;CS=DEL_union;EAS_AF=0.1401;END=5654540;EUR_AF=0.1097;NS=2504;SAS_AF=0.0947;SVTYPE=DEL\tGT\t.\nX\t5700930\tBI_GS_DEL1_B3_P2903_29\tC\t<CN0>\t100\tPASS\tAC=11;AF=0.0418543;AFR_AF=0.0339;AMR_AF=0.0477;AN=2542;CIEND=-7,8;CIPOS=-7,8;CS=DEL_union;EAS_AF=0.0432;END=5702199;EUR_AF=0.0431;NS=2504;SAS_AF=0.046;SVTYPE=DEL\tGT\t.\nX\t5736335\tUW_VH_6506\tT\t<CN0>\t100\tPASS\tAC=23;AF=0.0590728;AFR_AF=0.0598;AMR_AF=0.0553;AN=2542;CIEND=0,305;CIPOS=-264,0;CS=DEL_union;EAS_AF=0.0641;END=5737554;EUR_AF=0.0574;MC=BI_GS_DEL1_B4_P2903_92;NS=2504;SAS_AF=0.0571;SVTYPE=DEL\tGT\t.\nX\t5737304\tDEL_pindel_53032\tTCTTTGGCTTGCTCATGAGGTACTTTTGTTGAGTACACCCCTGTATTTATTGAGATATAATTTATGAATAAAATTGTGTGCAATGTGATTCTTATATAAGCATCACACTACACACCTTAAATTTATACACACACAACTATGAGTATTTTCTGACCCCAGCCCTAGATTCAGC\tT\t.\tPASS\tAC=739;AF=0.195762;AFR_AF=0.1785;AMR_AF=0.2156;AN=3775;CS=DEL_pindel;EAS_AF=0.199;END=5737475;EUR_AF=0.2063;NS=2504;SAS_AF=0.1908;SVTYPE=DEL\tGT\t1\nX\t5739550\tDEL_pindel_53033\tCGCAGGGACATGAAGATGGGAACAATATGAACTGCCGTCTACTAGGGGTCAGGGAGGGAGGGGGACAAGGGTTGAAAAACTACCTATTGGGTACTATGCCCAGTACTTGGGTGACAGATTCAATCATGCCACAAACCTCAGCATCACACAACATACCCAGGTAACAAACCCTCACATGTATTCTTGAATACAAAATAAAAATGGAAATTAAAAAAAAATGTGTGTGCTGGGCATCCAGATGGATTTCAAGGATACTCAAATTGTTGGCTAATGGCACTGGTCTGTGGACCTTAGTTTATTTAGAGACAAAATATATGCATGCATTGCTCAAGGTGCCAGCTGTCTCCCATCAGGCAGGTTTTGGATCCT\tC\t.\tPASS\tAC=729;AF=0.193113;AFR_AF=0.1276;AMR_AF=0.2004;AN=3775;CS=DEL_pindel;EAS_AF=0.2291;END=5739918;EUR_AF=0.2063;NS=2504;SAS_AF=0.227;SVTYPE=DEL\tGT\t1\nX\t5770974\tDEL_pindel_53035\tTCCCTTCCATCTGTACCTGTCTGTCACCCAAGACAAATCACATCTGGGTTCATCTTTGATCAAGAA\tT\t.\tPASS\tAC=1168;AF=0.309404;AFR_AF=0.3041;AMR_AF=0.3111;AN=3775;CS=DEL_pindel;EAS_AF=0.2997;END=5771039;EUR_AF=0.3016;NS=2504;SAS_AF=0.3343;SVTYPE=DEL\tGT\t1\nX\t5781754\tALU_umary_ALU_12556\tT\t<INS:ME:ALU>\t.\tPASS\tAC=514;AF=0.136159;AFR_AF=0.1276;AMR_AF=0.1794;AN=3775;CS=ALU_umary;EAS_AF=0.1034;EUR_AF=0.0953;MEINFO=AluYa5,5,281,-;NS=2504;SAS_AF=0.195;SVLEN=276;SVTYPE=ALU;TSD=TGCTGTATTGTTT\tGT\t0\nX\t5913070\tDEL_pindel_53039\tTATTTTTTATTTTGCTTTGGTTGCTACAATCTTTGTAACAGCTCCTCTAATGAATGAGTCAATACTTTTAATAATCCCTCTCAATGTAGCTATAGTTTTGCAAGAATTTCTCCACCTCTCACTTGGTTAACTGAAGCAAATGCTCTGGTTAAGTATGCAAATCCTATTTAAGAGAAAGGAGTTTCCCATGAAGGCACTGTCCTCTTCTTCCCTTGGGGAGCTTTATACACAAAATTGCCTCTGTGTGCGAAGAGCACAGGAACAGACAGACAG\tT\t.\tPASS\tAC=1034;AF=0.273907;AFR_AF=0.2632;AMR_AF=0.2557;AN=3775;CS=DEL_pindel;EAS_AF=0.2696;END=5913342;EUR_AF=0.2768;NS=2504;SAS_AF=0.3036;SVTYPE=DEL\tGT\t1\nX\t5981902\tBI_GS_DEL2_B2_P0591_1\tA\t<CN0>\t100\tPASS\tAC=9;AF=0.00264901;AFR_AF=0.004;AMR_AF=0.0019;AN=2542;CIEND=-14,14;CIPOS=-14,14;CS=DEL_union;EAS_AF=0;END=6094156;EUR_AF=0.0065;MC=YL_CN_ACB_5016;NS=2504;SAS_AF=0;SVTYPE=DEL\tGT\t.\nX\t6032455\tBI_GS_DEL1_B3_P2904_3\tT\t<CN0>\t100\tPASS\tAC=13;AF=0.00662252;AFR_AF=0.012;AMR_AF=0.0134;AN=2542;CIEND=-6,7;CIPOS=-6,7;CS=DEL_union;EAS_AF=0.0013;END=6035561;EUR_AF=0.0065;MC=YL_CN_IBS_4045,UW_VH_8353,EM_DL_DEL104027;NS=2504;SAS_AF=0;SVTYPE=DEL\tGT\t.\nX\t6098976\tALU_umary_ALU_12557\tC\t<INS:ME:ALU>\t.\tPASS\tAC=3;AF=0.0007947;AFR_AF=0.003;AMR_AF=0;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0;MEINFO=AluYc1,9,281,-;NS=2504;SAS_AF=0;SVLEN=272;SVTYPE=ALU;TSD=null\tGT\t0\nX\t6172055\tDUP_gs.X_CNV_X_6172055_6253928\tT\t<CN0>,<CN2>\t.\tPASS\tAC=0,1;AF=0,0.0002649;AFR_AF=0,0;AMR_AF=0,0;AN=3775;CS=DUP_gs;EAS_AF=0,0;END=6253928;EUR_AF=0,0;NS=2504;SAS_AF=0,0.0014;SVTYPE=DUP\tGT\t0\nX\t6280643\tALU_umary_ALU_12558\tT\t<INS:ME:ALU>\t.\tPASS\tAC=2;AF=0.0005298;AFR_AF=0;AMR_AF=0;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0;MEINFO=AluYc1,11,280,-;NS=2504;SAS_AF=0.0028;SVLEN=269;SVTYPE=ALU;TSD=null\tGT\t0\nX\t6289424\tDUP_gs.X_CNV_X_6289424_6441948\tG\t<CN0>,<CN2>\t.\tPASS\tAC=0,2;AF=0,0.0005298;AFR_AF=0,0;AMR_AF=0,0;AN=3775;CS=DUP_gs;EAS_AF=0,0;END=6441948;EUR_AF=0,0;NS=2504;SAS_AF=0,0.0028;SVTYPE=DUP\tGT\t0\nX\t6304132\tUW_VH_21195\tT\t<CN0>\t100\tPASS\tAC=8;AF=0.00211921;AFR_AF=0.002;AMR_AF=0.0019;AN=2542;CIEND=0,125;CIPOS=-188,0;CS=DEL_union;EAS_AF=0.0013;END=6314759;EUR_AF=0.0052;MC=YL_CN_CHB_4605;NS=2504;SAS_AF=0;SVTYPE=DEL\tGT\t.\nX\t6304187\tDUP_gs.X_CNV_X_6304187_6314903\tG\t<CN0>,<CN2>\t.\tPASS\tAC=1,1;AF=0.0002649,0.0002649;AFR_AF=0,0;AMR_AF=0,0;AN=3775;CS=DUP_gs;EAS_AF=0.0013,0;END=6314903;EUR_AF=0,0;NS=2504;SAS_AF=0,0.0014;SVTYPE=CNV\tGT\t0\nX\t6338280\tDUP_gs.X_CNV_X_6338280_6349405\tT\t<CN0>,<CN2>\t.\tPASS\tAC=0,4;AF=0,0.0010596;AFR_AF=0,0.002;AMR_AF=0,0;AN=3775;CS=DUP_gs;EAS_AF=0,0;END=6349405;EUR_AF=0,0;NS=2504;SAS_AF=0,0.0028;SVTYPE=DUP\tGT\t0\nX\t6450536\tDUP_gs.X_CNV_X_6450536_6466660\tT\t<CN0>,<CN2>\t.\tPASS\tAC=0,2;AF=0,0.0005298;AFR_AF=0,0;AMR_AF=0,0;AN=3775;CS=DUP_gs;EAS_AF=0,0.0026;END=6466660;EUR_AF=0,0;NS=2504;SAS_AF=0,0;SVTYPE=DUP\tGT\t0\nX\t6546090\tDEL_pindel_53045\tGTATATGTGCATATACATGTATAGGTATATATGCATGTGTATGTATATATACATGCATGTACATACATATATATGTATATGTACATACATACA\tG\t.\tPASS\tAC=570;AF=0.150993;AFR_AF=0.1077;AMR_AF=0.1794;AN=3775;CS=DEL_pindel;EAS_AF=0.1715;END=6546182;EUR_AF=0.1527;NS=2504;SAS_AF=0.1671;SVTYPE=DEL\tGT\t1\nX\t6553786\tYL_CN_KHV_4961\tT\t<CN0>\t100\tPASS\tAC=10;AF=0.00291391;AFR_AF=0.002;AMR_AF=0.0019;AN=2542;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0.0013;END=6810498;EUR_AF=0.0078;NS=2504;SAS_AF=0.0014;SVTYPE=DEL\tGT\t.\nX\t6587841\tDEL_pindel_53046\tGGATGGATGGATGGATGGATGGATGGAGAGTGAGTGGATGAATGCAGGAATTGATGAATGAATGCATGGACAGATGTATAGAAGAGTGGAATGTAAGAATCAATGAAGACATGGGTGAATAAATAGGTAGATGGATTGACAGAGGAAACAGGTGTGGATAGAT\tG\t.\tPASS\tAC=186;AF=0.0492715;AFR_AF=0.0349;AMR_AF=0.0592;AN=3775;CS=DEL_pindel;EAS_AF=0.0654;END=6588003;EUR_AF=0.0548;NS=2504;SAS_AF=0.039;SVTYPE=DEL\tGT\t0\nX\t6595308\tBI_GS_DEL2_B5_P0591_1\tC\t<CN0>\t100\tPASS\tAC=10;AF=0.00291391;AFR_AF=0.003;AMR_AF=0.0019;AN=2542;CIEND=-6,6;CIPOS=-6,6;CS=DEL_union;EAS_AF=0;END=7515400;EUR_AF=0.0078;NS=2504;SAS_AF=0.0014;SVTYPE=DEL\tGT\t.\nX\t6726073\tBI_GS_DEL1_B2_P2904_338\tA\t<CN0>\t100\tPASS\tAC=16;AF=0.0341722;AFR_AF=0.0389;AMR_AF=0.0344;AN=2542;CIEND=-2,3;CIPOS=-2,3;CS=DEL_union;EAS_AF=0.038;END=6727444;EUR_AF=0.0418;MC=YL_CN_KHV_4962;NS=2504;SAS_AF=0.0153;SVTYPE=DEL\tGT\t.\nX\t6744655\tYL_CN_FIN_4262\tA\t<CN0>\t100\tPASS\tAC=14;AF=0.00423841;AFR_AF=0.003;AMR_AF=0.0057;AN=2542;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0.0013;END=6829033;EUR_AF=0.0104;MC=BI_GS_DEL1_B1_P2904_487,UW_VH_4709;NS=2504;SAS_AF=0.0014;SVTYPE=DEL\tGT\t.\nX\t6805783\tBI_GS_DEL1_B3_P2904_21\tA\t<CN0>\t100\tPASS\tAC=12;AF=0.00423841;AFR_AF=0.004;AMR_AF=0.0038;AN=2542;CIEND=-14,14;CIPOS=-14,14;CS=DEL_union;EAS_AF=0.0013;END=6814540;EUR_AF=0.0104;MC=YL_CN_MSL_3984;NS=2504;SAS_AF=0.0014;SVTYPE=DEL\tGT\t.\nX\t6920132\tBI_GS_DEL1_B4_P2904_121\tA\t<CN0>\t100\tPASS\tAC=15;AF=0.00556291;AFR_AF=0.013;AMR_AF=0.0019;AN=2542;CIEND=-17,17;CIPOS=-17,17;CS=DEL_union;EAS_AF=0;END=6936637;EUR_AF=0.0078;MC=YL_CN_ASW_4500;NS=2504;SAS_AF=0.0014;SVTYPE=DEL\tGT\t.\nX\t7167702\tUW_VH_4899\tA\t<CN0>\t100\tPASS\tAC=22;AF=0.0574834;AFR_AF=0.0668;AMR_AF=0.0496;AN=2542;CIEND=0,339;CIPOS=-348,0;CS=DEL_union;EAS_AF=0.055;END=7168924;EUR_AF=0.0574;MC=BI_GS_DEL1_B1_P2905_125;NS=2504;SAS_AF=0.0529;SVTYPE=DEL\tGT\t.\nX\t7208548\tL1_umary_LINE1_2998\tA\t<INS:ME:LINE1>\t.\tPASS\tAC=2;AF=0.0005298;AFR_AF=0;AMR_AF=0;AN=3775;CS=L1_umary;EAS_AF=0.0026;EUR_AF=0;MEINFO=LINE1,5418,6008,+;NS=2504;SAS_AF=0;SVLEN=590;SVTYPE=LINE1;TSD=null\tGT\t0\nX\t7208889\tBI_GS_DEL1_B3_P2905_5\tG\t<CN0>\t100\tPASS\tAC=7;AF=0.00980132;AFR_AF=0.008;AMR_AF=0.0115;AN=2542;CIEND=-4,4;CIPOS=-4,4;CS=DEL_union;EAS_AF=0.0039;END=7211376;EUR_AF=0.0209;MC=YL_CN_GWD_5793;NS=2504;SAS_AF=0.0056;SVTYPE=DEL\tGT\t.\nX\t7286803\tBI_GS_DEL1_B1_P2905_218\tT\t<CN0>\t100\tPASS\tAC=9;AF=0.00291391;AFR_AF=0.003;AMR_AF=0.0019;AN=2542;CIEND=-43,43;CIPOS=-43,43;CS=DEL_union;EAS_AF=0;END=7311421;EUR_AF=0.0078;MC=YL_CN_GBR_4481;NS=2504;SAS_AF=0.0014;SVTYPE=DEL\tGT\t.\nX\t7318688\tBI_GS_DEL2_B4_P0591_1\tG\t<CN0>\t100\tPASS\tAC=9;AF=0.00291391;AFR_AF=0.002;AMR_AF=0.0019;AN=2542;CIEND=-9,9;CIPOS=-9,9;CS=DEL_union;EAS_AF=0;END=7495426;EUR_AF=0.0091;MC=YL_CN_CEU_5386;NS=2504;SAS_AF=0.0014;SVTYPE=DEL\tGT\t.\nX\t7487044\tDUP_gs.X_CNV_X_7487044_7586777\tA\t<CN0>,<CN2>\t.\tPASS\tAC=2,3;AF=0.0005298,0.0007947;AFR_AF=0.002,0;AMR_AF=0,0.0019;AN=3775;CS=DUP_gs;EAS_AF=0,0;END=7586777;EUR_AF=0,0.0013;NS=2504;SAS_AF=0,0.0014;SVTYPE=CNV\tGT\t0\nX\t7492456\tL1_umary_LINE1_2999\tT\t<INS:ME:LINE1>\t.\tPASS\tAC=48;AF=0.0127152;AFR_AF=0.0439;AMR_AF=0.0076;AN=3775;CS=L1_umary;EAS_AF=0;EUR_AF=0;MEINFO=LINE1,3148,6018,-;NS=2504;SAS_AF=0;SVLEN=2870;SVTYPE=LINE1;TSD=TTATTGTATGCTT\tGT\t0\nX\t7501257\tDUP_gs.X_CNV_X_7501257_7621795\tT\t<CN0>,<CN2>\t.\tPASS\tAC=0,3;AF=0,0.0007947;AFR_AF=0,0;AMR_AF=0,0.0019;AN=3775;CS=DUP_gs;EAS_AF=0,0;END=7621795;EUR_AF=0,0.0013;NS=2504;SAS_AF=0,0.0014;SVTYPE=DUP\tGT\t0\nX\t7579206\tBI_GS_DEL1_B5_P2905_542\tC\t<CN0>\t100\tPASS\tAC=9;AF=0.00264901;AFR_AF=0.003;AMR_AF=0;AN=2542;CIEND=-3,4;CIPOS=-3,4;CS=DEL_union;EAS_AF=0;END=7601961;EUR_AF=0.0078;MC=UW_VH_23065,YL_CN_LWK_4144;NS=2504;SAS_AF=0.0014;SVTYPE=DEL\tGT\t.\nX\t7619445\tBI_GS_DEL1_B4_P2905_81\tA\t<CN0>\t100\tPASS\tAC=7;AF=0.00238411;AFR_AF=0.002;AMR_AF=0;AN=2542;CIEND=-42,43;CIPOS=-42,43;CS=DEL_union;EAS_AF=0.0013;END=7679429;EUR_AF=0.0065;NS=2504;SAS_AF=0.0014;SVTYPE=DEL\tGT\t.\nX\t7711105\tL1_umary_LINE1_3000\tC\t<INS:ME:LINE1>\t.\tPASS\tAC=1;AF=0.0002649;AFR_AF=0;AMR_AF=0.0019;AN=3775;CS=L1_umary;EAS_AF=0;EUR_AF=0;MEINFO=LINE1,2777,3053,-;NS=2504;SAS_AF=0;SVLEN=276;SVTYPE=LINE1;TSD=null\tGT\t0\nX\t7727698\tALU_umary_ALU_12559\tC\t<INS:ME:ALU>\t.\tPASS\tAC=1;AF=0.0002649;AFR_AF=0;AMR_AF=0;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0.0013;MEINFO=AluYa3_1,1,216,+;NS=2504;SAS_AF=0;SVLEN=215;SVTYPE=ALU;TSD=null\tGT\t0\nX\t7761191\tALU_umary_ALU_12560\tT\t<INS:ME:ALU>\t.\tPASS\tAC=17;AF=0.00450331;AFR_AF=0;AMR_AF=0;AN=3775;CS=ALU_umary;EAS_AF=0.0223;EUR_AF=0;MEINFO=AluUndef,5,281,+;NS=2504;SAS_AF=0;SVLEN=276;SVTYPE=ALU;TSD=null\tGT\t0\nX\t7798705\tL1_umary_LINE1_3001\tT\t<INS:ME:LINE1>\t.\tPASS\tAC=1;AF=0.0002649;AFR_AF=0;AMR_AF=0;AN=3775;CS=L1_umary;EAS_AF=0;EUR_AF=0.0013;MEINFO=LINE1,4890,5937,-;NS=2504;SAS_AF=0;SVLEN=1047;SVTYPE=LINE1;TSD=null\tGT\t0\nX\t7838340\tYL_CN_GWD_5794\tT\t<CN0>\t100\tPASS\tAC=10;AF=0.00317881;AFR_AF=0.004;AMR_AF=0.0019;AN=2542;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0;END=7956724;EUR_AF=0.0078;NS=2504;SAS_AF=0.0014;SVTYPE=DEL\tGT\t.\nX\t7932146\tBI_GS_DEL1_B3_P2905_32\tC\t<CN0>\t100\tPASS\tAC=14;AF=0.00503311;AFR_AF=0.012;AMR_AF=0;AN=2542;CIEND=-1,2;CIPOS=-1,2;CS=DEL_union;EAS_AF=0;END=7944040;EUR_AF=0.0078;MC=UW_VH_14868,YL_CN_ACB_5018;NS=2504;SAS_AF=0.0014;SVTYPE=DEL\tGT\t.\nX\t8024056\tALU_umary_ALU_12561\tA\t<INS:ME:ALU>\t.\tPASS\tAC=26;AF=0.00688742;AFR_AF=0.0259;AMR_AF=0;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0;MEINFO=AluYb8,1,281,+;NS=2504;SAS_AF=0;SVLEN=280;SVTYPE=ALU;TSD=AAAAAATCAAGAGTA\tGT\t0\nX\t8084563\tYL_CN_CDX_3790\tG\t<CN0>\t100\tPASS\tAC=9;AF=0.0156291;AFR_AF=0.0179;AMR_AF=0.0038;AN=2542;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0.0183;END=8088175;EUR_AF=0.0235;NS=2504;SAS_AF=0.0097;SVTYPE=DEL\tGT\t.\nX\t8114725\tL1_umary_LINE1_3002\tC\t<INS:ME:LINE1>\t.\tPASS\tAC=2;AF=0.0005298;AFR_AF=0;AMR_AF=0.0019;AN=3775;CS=L1_umary;EAS_AF=0;EUR_AF=0;MEINFO=LINE1,3600,5869,+;NS=2504;SAS_AF=0.0014;SVLEN=2269;SVTYPE=LINE1;TSD=null\tGT\t0\nX\t8122956\tDEL_pindel_53061\tTAACATGGTGAAACCCTGTCTCTACTAAAAAATACAACAAAAATTAGCTGGGTGTGGTGGTGGGCTCCTGTAGTCCCAGCTACTGGGGAGGCTGAGGCAGGAGAATGACATGAACCCGGGAGGCAGAGCTTGTAGTGAGCCGAGATCGCGCCACTGCACTCCAGCCTGGGCGACAGAGCAAGACTCTGTCTCAAAAAAGATAAAAAAGAAAATCCTTTTCCAAATGATGGAATATAGTAACAGAAAACAGAATCCCTACTTTAGTGCTAGAGAGATAGTTTATTTTTCAAGGTCATGTGACACTTACCGAATACTCTTAAAATTGTAAGCAAATAACATCTAGATTTTGCCGAGAGCTCCAACTTTGCAAGCGTGCATAAAAAGCCTCTGTTTCTTCCTAAGTCAAAGAATGGAAGACAGAGCCCTGGAGTGTCTGGGAGATACTTATTCTACATGTGCCAGGTGCTTAGTGCCCAGGCAACTGGTTAGAATCAAGTTAACCTCAATTCGTTTTCCATCAATGATTCTGGAATTTCTATGAAAACAGTTGACCTGGAGACCCCAGTAGTTGCTGAAGAAATCTGGGCTTTCAATCATCTCCTACTTTTGACTCCAGTCTATTCCAGAACTAGGCATTTAGCCTCTATTATGAATACTCTCCTCACTGGCAAAGAAAAGGAGGTGGGTAATGATTACCTAAACTTCAGAGCTAACTATAAGCATAATTTGTGGCCAGGTGTGGTGGCTCACACCTGTAATCCCAGCACTTTGGGAGGCTGAGGCAGGCAGATCACTTGCGGCCAGGAGTTCTAGACCAGCCTGGCC\tT\t.\tPASS\tAC=889;AF=0.235497;AFR_AF=0.2024;AMR_AF=0.2462;AN=3775;CS=DEL_pindel;EAS_AF=0.2513;END=8123780;EUR_AF=0.2311;NS=2504;SAS_AF=0.2618;SVTYPE=DEL\tGT\t1\nX\t8149287\tALU_umary_ALU_12562\tT\t<INS:ME:ALU>\t.\tPASS\tAC=32;AF=0.00847682;AFR_AF=0.0319;AMR_AF=0;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0;MEINFO=AluUndef,1,281,-;NS=2504;SAS_AF=0;SVLEN=280;SVTYPE=ALU;TSD=CTCATTAAATATTTTTT\tGT\t0\nX\t8171202\tBI_GS_DEL1_B3_P2906_6\tA\t<CN0>\t100\tPASS\tAC=13;AF=0.00476821;AFR_AF=0.013;AMR_AF=0;AN=2542;CIEND=-3,4;CIPOS=-3,4;CS=DEL_union;EAS_AF=0;END=8179574;EUR_AF=0.0065;MC=UW_VH_17180,YL_CN_ESN_4373;NS=2504;SAS_AF=0;SVTYPE=DEL\tGT\t.\nX\t8197961\tYL_CN_FIN_4263\tC\t<CN0>\t100\tPASS\tAC=8;AF=0.00211921;AFR_AF=0.002;AMR_AF=0.0019;AN=2542;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0;END=8349082;EUR_AF=0.0065;NS=2504;SAS_AF=0;SVTYPE=DEL\tGT\t.\nX\t8290447\tUW_VH_11778\tT\t<CN0>\t100\tPASS\tAC=10;AF=0.00291391;AFR_AF=0.003;AMR_AF=0;AN=2542;CIEND=0,238;CIPOS=-258,0;CS=DEL_union;EAS_AF=0.0039;END=8335335;EUR_AF=0.0065;MC=YL_CN_CDX_3792,BI_GS_DEL1_B2_P2906_115;NS=2504;SAS_AF=0;SVTYPE=DEL\tGT\t.\nX\t8374863\tDUP_gs.X_CNV_X_8374863_8456441\tA\t<CN0>,<CN2>\t.\tPASS\tAC=0,1;AF=0,0.0002649;AFR_AF=0,0;AMR_AF=0,0;AN=3775;CS=DUP_gs;EAS_AF=0,0;END=8456441;EUR_AF=0,0;NS=2504;SAS_AF=0,0.0014;SVTYPE=DUP\tGT\t0\nX\t8414134\tDUP_gs.X_CNV_X_8414134_8429188\tT\t<CN0>,<CN2>\t.\tPASS\tAC=0,2;AF=0,0.0005298;AFR_AF=0,0;AMR_AF=0,0;AN=3775;CS=DUP_gs;EAS_AF=0,0;END=8429188;EUR_AF=0,0;NS=2504;SAS_AF=0,0.0028;SVTYPE=DUP\tGT\t0\nX\t8456074\tDEL_pindel_53069\tTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCATCTACCTATCCATCTATTTGTATCTATCTATCTATCTATATCTGTCTATCTGTCTCTCTGTCTATCTATCTGTCTGTCTCTCTATTTGTCTGTCTGGCTGGCTTGCTGGCTGGCTATCGTTTGTCTATCTATCTGTGGATCTGTCTGTCTAACTATCTTTCTGTCTATCTGTCTATCTATCTGTCTATCTGTCTGCCTATCTGTCTATTTGTCTGACTGGCTGGCTGGCTATCTATCTATCTATCTATCTATCTATC\tT\t.\tPASS\tAC=750;AF=0.198675;AFR_AF=0.2004;AMR_AF=0.208;AN=3775;CS=DEL_pindel;EAS_AF=0.1846;END=8456371;EUR_AF=0.1828;NS=2504;SAS_AF=0.2214;SVTYPE=DEL\tGT\t0\nX\t8580581\tDEL_pindel_53070\tTAAAACAAGAAGTTTTTTTTTTTTTTTTTAAAGAAGCACTAAAATTGACAAAATTCTATTGGGATGAATCAAG\tT\t.\tPASS\tAC=1050;AF=0.278146;AFR_AF=0.2542;AMR_AF=0.2786;AN=3775;CS=DEL_pindel;EAS_AF=0.2762;END=8580653;EUR_AF=0.2833;NS=2504;SAS_AF=0.3078;SVTYPE=DEL\tGT\t0\nX\t8644055\tDUP_gs.X_CNV_X_8644055_8681405\tC\t<CN0>,<CN2>\t.\tPASS\tAC=0,2;AF=0,0.0005298;AFR_AF=0,0;AMR_AF=0,0;AN=3775;CS=DUP_gs;EAS_AF=0,0.0026;END=8681405;EUR_AF=0,0;NS=2504;SAS_AF=0,0;SVTYPE=DUP\tGT\t0\nX\t8675984\tDEL_pindel_53071\tTGGCCAGGCATGGTGGCACACGCCTGTAATCCCAGCACTTTGGGAGGCTGAGGCGGGTG\tT\t.\tPASS\tAC=592;AF=0.156821;AFR_AF=0.1037;AMR_AF=0.1737;AN=3775;CS=DEL_pindel;EAS_AF=0.1728;END=8676042;EUR_AF=0.1723;NS=2504;SAS_AF=0.1852;SVTYPE=DEL\tGT\t0\nX\t8709374\tUW_VH_17803\tA\t<CN0>\t100\tPASS\tAC=79;AF=0.11947;AFR_AF=0.1196;AMR_AF=0.1221;AN=2542;CIEND=0,266;CIPOS=-145,0;CS=DEL_union;EAS_AF=0.1361;END=8710380;EUR_AF=0.1149;NS=2504;SAS_AF=0.1045;SVTYPE=DEL\tGT\t.\nX\t8786514\tUW_VH_3170\tA\t<CN0>\t100\tPASS\tAC=65;AF=0.034702;AFR_AF=0.016;AMR_AF=0.0496;AN=2542;CIEND=0,324;CIPOS=-326,0;CS=DEL_union;EAS_AF=0.0079;END=8788914;EUR_AF=0.0914;MC=YL_CN_PJL_4997,YL_CN_CEU_5387;NS=2504;SAS_AF=0.0181;SVTYPE=DEL\tGT\t.\nX\t8839235\tBI_GS_DEL1_B2_P2906_395\tG\t<CN0>\t100\tPASS\tAC=9;AF=0.00264901;AFR_AF=0.003;AMR_AF=0.0019;AN=2542;CIEND=-4,5;CIPOS=-4,5;CS=DEL_union;EAS_AF=0.0026;END=8857520;EUR_AF=0.0052;MC=YL_CN_KHV_4966;NS=2504;SAS_AF=0;SVTYPE=DEL\tGT\t.\nX\t8878375\tDEL_pindel_53075\tCTAGGGTCCCTAAGCAATGATCACCTGTAGAGTCCCTGAATGATGATCACTTG\tC\t.\tPASS\tAC=126;AF=0.0333775;AFR_AF=0.0229;AMR_AF=0.0305;AN=3775;CS=DEL_pindel;EAS_AF=0.0406;END=8878427;EUR_AF=0.0457;NS=2504;SAS_AF=0.0292;SVTYPE=DEL\tGT\t0\nX\t8948436\tDEL_pindel_53077\tCCCCTGCTTCAGCAAAGATATCCCAAGTCACTCACTGTCAAAATTAATAGAATTGA\tC\t.\tPASS\tAC=929;AF=0.246093;AFR_AF=0.2074;AMR_AF=0.2462;AN=3775;CS=DEL_pindel;EAS_AF=0.2644;END=8948491;EUR_AF=0.2311;NS=2504;SAS_AF=0.2967;SVTYPE=DEL\tGT\t1\nX\t8964831\tBI_GS_DEL1_B1_P2906_600\tT\t<CN0>\t100\tPASS\tAC=14;AF=0.0222517;AFR_AF=0.0189;AMR_AF=0.0153;AN=2542;CIEND=-18,18;CIPOS=-18,18;CS=DEL_union;EAS_AF=0.0314;END=8967243;EUR_AF=0.0248;NS=2504;SAS_AF=0.0195;SVTYPE=DEL\tGT\t.\nX\t9066905\tDEL_pindel_53079\tCTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTTCTTTCTTTCTTTCTTTCTTTCTT\tC\t.\tPASS\tAC=1002;AF=0.26543;AFR_AF=0.2473;AMR_AF=0.2748;AN=3775;CS=DEL_pindel;EAS_AF=0.2631;END=9066962;EUR_AF=0.2533;NS=2504;SAS_AF=0.2994;SVTYPE=DEL\tGT\t1\nX\t9116092\tALU_umary_ALU_12563\tG\t<INS:ME:ALU>\t.\tPASS\tAC=5;AF=0.0013245;AFR_AF=0;AMR_AF=0;AN=3775;CS=ALU_umary;EAS_AF=0.0065;EUR_AF=0;MEINFO=AluUndef,4,281,+;NS=2504;SAS_AF=0;SVLEN=277;SVTYPE=ALU;TSD=null\tGT\t0\nX\t9135425\tBI_GS_DEL1_B1_P2907_103\tG\t<CN0>\t100\tPASS\tAC=23;AF=0.0598675;AFR_AF=0.0618;AMR_AF=0.0782;AN=2542;CIEND=-42,43;CIPOS=-42,43;CS=DEL_union;EAS_AF=0.0471;END=9136655;EUR_AF=0.0587;NS=2504;SAS_AF=0.0585;SVTYPE=DEL\tGT\t.\nX\t9174424\tALU_umary_ALU_12564\tT\t<INS:ME:ALU>\t.\tPASS\tAC=25;AF=0.00662252;AFR_AF=0.0229;AMR_AF=0.0038;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0;MEINFO=AluUndef,1,281,-;NS=2504;SAS_AF=0;SVLEN=280;SVTYPE=ALU;TSD=GACGAGGTCTTTT\tGT\t0\nX\t9385298\tALU_umary_ALU_12565\tG\t<INS:ME:ALU>\t.\tPASS\tAC=8;AF=0.00211921;AFR_AF=0.008;AMR_AF=0;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0;MEINFO=AluUndef,1,279,+;NS=2504;SAS_AF=0;SVLEN=278;SVTYPE=ALU;TSD=null\tGT\t0\nX\t9483027\tDEL_pindel_53088\tGAAGGCAGATGTTATCAGGAGTTAAAATGTGATGTGTGTACCGCTCATGTGTGTATGGGGTGTGCTCCTTTTGTTTTTGATGCTGAAATGAGACAAATCATTTCCCTTTTAAGCTCCAGGCAGACTGATGGAGGGGGGAAAAATAACACCCAACTTACTGCAACCTGAAATCCTTTGCCTTGGATCCACTTCCTAAGTTCCTATAGTCCTTATTTTATAAACTGATAAAACAACTTTTCTCTCTCAAGTGATGATCATCTTGTGTTTTACACTAATTAAGCCCATATACACCTCCCTTTGGAATTCCTTCTTCTGATCTGCTTGGCCTGTTTGCCAGTTAGTCGCCTTACTAGGAGAATCAAAATGTAAACTCATAATAGACAGGAACCCAACATCATCAGCACAGGATGTGGCAGAATGATTTTTCTTTCCCACCTCTTGCTGAGAAGGCAATGAGATTGGAAATGGCAAACACCCCAGAGTTCTGTAACTCTGAGTGTGGAAGAGGAGGTGGCAGCCCTTGACCTCAGTAGCGGAGCCAGATCATCGAACATCCCCGTCCAGGAATCTGGACATGCACTGGTCAAGAATTCAGCACAATTTCCTTTGGTCTGGGGATTGGGAAGCTCTTTTTGTGAGTGAGGCATGGAGTGAAATTGCAGAAGCCTGCGTGACTTGTAGAAACCGAAGCCAGGCTCGTTTACTGCCTTGCACAAGGGAGATATGATAAGACAGAATTTATTTGTGAGTGTCGTCGATGCCAAGGAGCCTGTCCAACATTTATAGAGGCTTTTGGGCTAAACGAAA\tG\t.\tPASS\tAC=675;AF=0.178808;AFR_AF=0.1446;AMR_AF=0.1947;AN=3775;CS=DEL_pindel;EAS_AF=0.1885;END=9483833;EUR_AF=0.1841;NS=2504;SAS_AF=0.1992;SVTYPE=DEL\tGT\t1\nX\t9516444\tNUMT_umich_MERGED_NUMT_202\tT\t<INS:MT>\t.\tPASS\tAC=2;AF=0.0005298;AFR_AF=0.001;AMR_AF=0.0019;AN=3775;CIEND=-5,0;CIPOS=0,5;CS=NUMT_umich;EAS_AF=0;END=9516448;EUR_AF=0;MEND=12290;MLEN=138;MSTART=12153;NS=2504;SAS_AF=0;SVTYPE=INS\tGT\t0\nX\t9553829\tUW_VH_15531\tT\t<CN0>\t100\tPASS\tAC=8;AF=0.00211921;AFR_AF=0.004;AMR_AF=0.0019;AN=2542;CIEND=0,52;CIPOS=-287,0;CS=DEL_union;EAS_AF=0;END=9559221;EUR_AF=0.0039;MC=BI_GS_DEL1_B3_P2907_14,YL_CN_GWD_5797;NS=2504;SAS_AF=0;SVTYPE=DEL\tGT\t.\nX\t9577278\tALU_umary_ALU_12566\tG\t<INS:ME:ALU>\t.\tPASS\tAC=1;AF=0.0002649;AFR_AF=0;AMR_AF=0.0019;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0;MEINFO=AluUndef,20,269,+;NS=2504;SAS_AF=0;SVLEN=249;SVTYPE=ALU;TSD=null\tGT\t0\nX\t9653719\tDEL_pindel_53092\tCAAAGTAATAATATCCTGTTCTCTTTTTCTTTTCTTTTCTTTTTTTTTTTTTTTTTT\tC\t.\tPASS\tAC=1056;AF=0.279735;AFR_AF=0.2732;AMR_AF=0.2691;AN=3775;CS=DEL_pindel;EAS_AF=0.2709;END=9653775;EUR_AF=0.2859;NS=2504;SAS_AF=0.2994;SVTYPE=DEL\tGT\t0\nX\t9698247\tDEL_pindel_53094\tGACTGTATATTGGATGTCCCTTGTGCCCTCAACTGCCTTTCTCAGATCCCCTGAAATCTTTGAAGTCCTAGAACTGAAACCCCAACCAGTGGGCACTGAGCATGAACCATAGAAAACATGACACCTGGCCCAACTCCACTTCAAGGTGTTAAATTTGATCTCGCCAGCTCA\tG\t.\tPASS\tAC=2042;AF=0.540927;AFR_AF=0.5892;AMR_AF=0.605;AN=3775;CS=DEL_pindel;EAS_AF=0.6702;END=9698417;EUR_AF=0.3995;NS=2504;SAS_AF=0.4401;SVTYPE=DEL\tGT\t1\nX\t9745809\tYL_CN_ITU_4633\tA\t<CN0>\t100\tPASS\tAC=11;AF=0.0235762;AFR_AF=0.0239;AMR_AF=0.0248;AN=2542;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0.0249;END=9749281;EUR_AF=0.0274;NS=2504;SAS_AF=0.0167;SVTYPE=DEL\tGT\t.\nX\t9782060\tBI_GS_DEL1_B5_P2907_651\tA\t<CN0>\t100\tPASS\tAC=10;AF=0.00264901;AFR_AF=0.004;AMR_AF=0.0019;AN=2542;CIEND=-60,61;CIPOS=-60,61;CS=DEL_union;EAS_AF=0;END=9794962;EUR_AF=0.0065;MC=YL_CN_LWK_4147;NS=2504;SAS_AF=0;SVTYPE=DEL\tGT\t.\nX\t9805013\tDEL_pindel_53099\tTGGTGTTCTGTGACTGGCTTTTTGACTCCGCATCATATTTTCGGGATTGATCCACATTGCAGGTGGTATCGGTACTCCATTCCCTTCCGGTGCCAA\tT\t.\tPASS\tAC=492;AF=0.130331;AFR_AF=0.0658;AMR_AF=0.166;AN=3775;CS=DEL_pindel;EAS_AF=0.178;END=9805108;EUR_AF=0.1319;NS=2504;SAS_AF=0.1421;SVTYPE=DEL\tGT\t1\nX\t9917061\tL1_umary_LINE1_3003\tT\t<INS:ME:LINE1>\t.\tPASS\tAC=1;AF=0.0002649;AFR_AF=0;AMR_AF=0;AN=3775;CS=L1_umary;EAS_AF=0;EUR_AF=0.0013;MEINFO=LINE1,57,3657,-;NS=2504;SAS_AF=0;SVLEN=3600;SVTYPE=LINE1;TSD=null\tGT\t0\nX\t9957233\tALU_umary_ALU_12567\tC\t<INS:ME:ALU>\t.\tPASS\tAC=8;AF=0.00211921;AFR_AF=0.008;AMR_AF=0;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0;MEINFO=AluUndef,1,281,+;NS=2504;SAS_AF=0;SVLEN=280;SVTYPE=ALU;TSD=null\tGT\t0\nX\t9957923\tYL_CN_GWD_5798\tC\t<CN0>\t100\tPASS\tAC=31;AF=0.0145695;AFR_AF=0.0319;AMR_AF=0.0038;AN=2542;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0.0118;END=9963345;EUR_AF=0.0104;MC=UW_VH_8705,YL_CN_MSL_3987;NS=2504;SAS_AF=0.0056;SVTYPE=DEL\tGT\t.\nX\t10212230\tYL_CN_KHV_4969\tT\t<CN0>\t100\tPASS\tAC=5;AF=0.00211921;AFR_AF=0.002;AMR_AF=0;AN=2542;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0.0039;END=10216340;EUR_AF=0.0039;NS=2504;SAS_AF=0;SVTYPE=DEL\tGT\t.\nX\t10233280\tL1_umary_LINE1_3004\tT\t<INS:ME:LINE1>\t.\tPASS\tAC=4;AF=0.0010596;AFR_AF=0.004;AMR_AF=0;AN=3775;CS=L1_umary;EAS_AF=0;EUR_AF=0;MEINFO=LINE1,1026,6014,-;NS=2504;SAS_AF=0;SVLEN=4988;SVTYPE=LINE1;TSD=TTT\tGT\t0\nX\t10240308\tDEL_pindel_53113\tCTGTAGGAAATAAAATTTTAAAAGCTTGCAAAATTAAAAAATAGATTATGACTTGTGCTAAAGTCTTCATTTCCATATA\tC\t.\tPASS\tAC=706;AF=0.18702;AFR_AF=0.1805;AMR_AF=0.1908;AN=3775;CS=DEL_pindel;EAS_AF=0.2081;END=10240386;EUR_AF=0.188;NS=2504;SAS_AF=0.1699;SVTYPE=DEL\tGT\t1\nX\t10346496\tYL_CN_CEU_5390\tT\t<CN0>\t100\tPASS\tAC=6;AF=0.0018543;AFR_AF=0.002;AMR_AF=0;AN=2542;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0;END=10353586;EUR_AF=0.0065;NS=2504;SAS_AF=0;SVTYPE=DEL\tGT\t.\nX\t10346677\tDUP_gs.X_CNV_X_10346677_10353846\tA\t<CN0>,<CN2>\t.\tPASS\tAC=1,1;AF=0.0002649,0.0002649;AFR_AF=0,0.001;AMR_AF=0,0;AN=3775;CS=DUP_gs;EAS_AF=0,0;END=10353846;EUR_AF=0.0013,0;NS=2504;SAS_AF=0,0;SVTYPE=CNV\tGT\t0\nX\t10457093\tDEL_pindel_53119\tTTTTCAAATCTTTTATGCATTTTGGTGAAAGGCTTGTTTTCTTATTAATGAGTTTTGAGAATTTGTTATATATTCTGGATACAATCCTTTATTAAAATAAATAATTTGTAAATATTTTCGCCTAGTTTGTGGTTGGTCTTTTCAGTCTCTTAACAGTGCATTCTGAAGAGGTTTTTAATTTTGATGAAACCCAACATATAAATATTTTCTTTTATGGATAATGCTTTTGTCATCTGTATGTAAAGAATCTTTGCCTAACCCAAGGTCAAGATCTCCTCCACGTTTTCTTCTAGGAGTTTTACAGCTTTTACCTTTTACATTTAGATATATAATCAATTTTGAGTAAAGTCTTGTATATAATGTGAAGTATGGATCAAACTTCATATTCTTACATACAGATATCCAATTGCTCCAGCACCAGTTACTAAAAAGACAATCCTTTCTCCACTGAAATTGCCTTTGCATCTTTGTTGAAAATCACTTGTCCATATATGTATGAATCTACTTCTCAAGTCTTTTTGCTGATCCTTTGATCTATTTGTCTATCTTTATACAAATACCACCTTATATTGATTTCTGAAGCCTTATAATAAATCTTGAAATCAGCTGATGTTAGTTCTCCAACTTTGTTATTATTTTCAAAGTTTTTTTTTTTTTTTTTGAGACAGAGTCTCTCTCTGTCGCCCGGGCCGGAGTGCAGTGGCGCAATCTCGGCTCACTGCAAACTCCGCCTCCCGGATTCACGCCATTCTCCTGCCTCAGCCTCCTGAGTAGCTGGGACTACAGGCTCCTGCCACCATGTCTGGCTTATTTTTTGTA\tT\t.\tPASS\tAC=530;AF=0.140397;AFR_AF=0.1376;AMR_AF=0.145;AN=3775;CS=DEL_pindel;EAS_AF=0.1623;END=10457911;EUR_AF=0.1319;NS=2504;SAS_AF=0.1267;SVTYPE=DEL\tGT\t0\nX\t10528860\tBI_GS_DEL1_B1_P2908_389\tT\t<CN0>\t100\tPASS\tAC=219;AF=0.100397;AFR_AF=0.2822;AMR_AF=0.0744;AN=2542;CIEND=0,1;CIPOS=0,1;CS=DEL_union;EAS_AF=0.0144;END=10531081;EUR_AF=0.0326;MC=UW_VH_3087,YL_CN_MSL_3988,YL_CN_PUR_5618,YL_CN_PEL_4312,UW_VH_17096;NS=2504;SAS_AF=0.0292;SVTYPE=DEL\tGT\t.\nX\t10552944\tYL_CN_GWD_5800\tA\t<CN0>\t100\tPASS\tAC=8;AF=0.00264901;AFR_AF=0.005;AMR_AF=0.0019;AN=2542;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0.0013;END=10558410;EUR_AF=0.0039;NS=2504;SAS_AF=0;SVTYPE=DEL\tGT\t.\nX\t10571074\tL1_umary_LINE1_3005\tA\t<INS:ME:LINE1>\t.\tPASS\tAC=2;AF=0.0005298;AFR_AF=0.002;AMR_AF=0;AN=3775;CS=L1_umary;EAS_AF=0;EUR_AF=0;MEINFO=LINE1,3635,5214,-;NS=2504;SAS_AF=0;SVLEN=1579;SVTYPE=LINE1;TSD=null\tGT\t0\nX\t10684958\tBI_GS_DEL1_B3_P2908_22\tC\t<CN0>\t100\tPASS\tAC=5;AF=0.0015894;AFR_AF=0.002;AMR_AF=0;AN=2542;CIEND=-62,62;CIPOS=-62,62;CS=DEL_union;EAS_AF=0;END=10699980;EUR_AF=0.0039;NS=2504;SAS_AF=0.0014;SVTYPE=DEL\tGT\t.\nX\t10688701\tDUP_gs.X_CNV_X_10688701_10697472\tC\t<CN0>,<CN2>\t.\tPASS\tAC=1,3;AF=0.0002649,0.0007947;AFR_AF=0,0;AMR_AF=0,0;AN=3775;CS=DUP_gs;EAS_AF=0,0.0039;END=10697472;EUR_AF=0,0;NS=2504;SAS_AF=0.0014,0;SVTYPE=CNV\tGT\t0\nX\t10695649\tBI_GS_DEL1_B2_P2908_389\tC\t<CN0>\t100\tPASS\tAC=8;AF=0.00450331;AFR_AF=0.006;AMR_AF=0.0019;AN=2542;CIEND=-13,13;CIPOS=-13,13;CS=DEL_union;EAS_AF=0.0013;END=10701112;EUR_AF=0.0091;NS=2504;SAS_AF=0.0028;SVTYPE=DEL\tGT\t.\nX\t10713733\tALU_umary_ALU_12568\tT\t<INS:ME:ALU>\t.\tPASS\tAC=1;AF=0.0002649;AFR_AF=0;AMR_AF=0;AN=3775;CS=ALU_umary;EAS_AF=0.0013;EUR_AF=0;MEINFO=AluUndef,22,263,+;NS=2504;SAS_AF=0;SVLEN=241;SVTYPE=ALU;TSD=null\tGT\t0\nX\t10853678\tBI_GS_DEL1_B2_P2908_439\tT\t<CN0>\t100\tPASS\tAC=10;AF=0.00423841;AFR_AF=0.004;AMR_AF=0;AN=2542;CIEND=-1,2;CIPOS=-1,2;CS=DEL_union;EAS_AF=0.0079;END=10856143;EUR_AF=0.0078;NS=2504;SAS_AF=0;SVTYPE=DEL\tGT\t.\nX\t11010862\tDEL_pindel_53127\tTGGTATGGATTAGACATGAAAATTAATGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAAAGTGCACCATGTTCTGATTAGCTAAGTAAACTGGAATCAGAAGCCACCTCTGGAGCTTATAGTCCACA\tT\t.\tPASS\tAC=1149;AF=0.304371;AFR_AF=0.2861;AMR_AF=0.3092;AN=3775;CS=DEL_pindel;EAS_AF=0.2945;END=11010997;EUR_AF=0.3016;NS=2504;SAS_AF=0.3398;SVTYPE=DEL\tGT\t1\nX\t11055259\tALU_umary_ALU_12570\tG\t<INS:ME:ALU>\t.\tPASS\tAC=16;AF=0.00423841;AFR_AF=0;AMR_AF=0;AN=3775;CS=ALU_umary;EAS_AF=0.0209;EUR_AF=0;MEINFO=AluYa5,1,280,+;NS=2504;SAS_AF=0;SVLEN=279;SVTYPE=ALU;TSD=null\tGT\t0\nX\t11096392\tDEL_pindel_53128\tTAAAAACTTCTAACTCATGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA\tT\t.\tPASS\tAC=1226;AF=0.324768;AFR_AF=0.3599;AMR_AF=0.313;AN=3775;CS=DEL_pindel;EAS_AF=0.301;END=11096731;EUR_AF=0.2872;MEINFO=AluYa4_5,1,281,+;NS=2504;SAS_AF=0.3496;SVTYPE=DEL_ALU\tGT\t1\nX\t11098427\tALU_umary_ALU_12571\tA\t<INS:ME:ALU>\t.\tPASS\tAC=1;AF=0.0002649;AFR_AF=0.001;AMR_AF=0;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0;MEINFO=AluY,15,280,+;NS=2504;SAS_AF=0;SVLEN=265;SVTYPE=ALU;TSD=null\tGT\t0\nX\t11182018\tALU_umary_ALU_12572\tC\t<INS:ME:ALU>\t.\tPASS\tAC=75;AF=0.0198676;AFR_AF=0.004;AMR_AF=0.0134;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0.0235;MEINFO=AluUndef,1,281,+;NS=2504;SAS_AF=0.0641;SVLEN=280;SVTYPE=ALU;TSD=AAAGAAATCAGCAGTC\tGT\t0\nX\t11201717\tALU_umary_ALU_12573\tG\t<INS:ME:ALU>\t.\tPASS\tAC=1;AF=0.0002649;AFR_AF=0;AMR_AF=0;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0;MEINFO=AluUndef,54,278,-;NS=2504;SAS_AF=0.0014;SVLEN=224;SVTYPE=ALU;TSD=null\tGT\t0\nX\t11628393\tL1_umary_LINE1_3006\tT\t<INS:ME:LINE1>\t.\tPASS\tAC=61;AF=0.0161589;AFR_AF=0.0588;AMR_AF=0.0038;AN=3775;CS=L1_umary;EAS_AF=0;EUR_AF=0;MEINFO=LINE1,5487,6019,-;NS=2504;SAS_AF=0;SVLEN=532;SVTYPE=LINE1;TSD=AAGAAATTAAAACATTTT\tGT\t0\nX\t11731977\tL1_umary_LINE1_3007\tA\t<INS:ME:LINE1>\t.\tPASS\tAC=1;AF=0.0002649;AFR_AF=0;AMR_AF=0;AN=3775;CS=L1_umary;EAS_AF=0;EUR_AF=0;MEINFO=LINE1,5123,6018,-;NS=2504;SAS_AF=0.0014;SVLEN=895;SVTYPE=LINE1;TSD=TTAGTTTACTCAATTCCATGTGGA\tGT\t0\nX\t11830023\tDEL_pindel_53146\tGTTCTCCAGTACCGCAGGCTCAAATTTGTAATACAATATTGCTCTTTGGTTGTCTAAAGTATATCTCGACATTAACATACCTAGAAGAGAA\tG\t.\tPASS\tAC=1035;AF=0.274172;AFR_AF=0.2532;AMR_AF=0.2748;AN=3775;CS=DEL_pindel;EAS_AF=0.2736;END=11830113;EUR_AF=0.2755;NS=2504;SAS_AF=0.3022;SVTYPE=DEL\tGT\t1\nX\t11885210\tL1_umary_LINE1_3008\tC\t<INS:ME:LINE1>\t.\tPASS\tAC=7;AF=0.0018543;AFR_AF=0;AMR_AF=0;AN=3775;CS=L1_umary;EAS_AF=0.0092;EUR_AF=0;MEINFO=LINE1,4413,6019,-;NS=2504;SAS_AF=0;SVLEN=1606;SVTYPE=LINE1;TSD=null\tGT\t0\nX\t11932522\tDEL_pindel_53147\tAAAAGGAGTACTGAGCAGCAAGAAGGGACCATGGCAATTGTGGAAAGTTTGAGCATGCAAGTCTAACTAAAGGCATTTAAACAC\tA\t.\tPASS\tAC=185;AF=0.0490066;AFR_AF=0.007;AMR_AF=0.042;AN=3775;CS=DEL_pindel;EAS_AF=0.0877;END=11932605;EUR_AF=0.0509;NS=2504;SAS_AF=0.0696;SVTYPE=DEL\tGT\t0\nX\t12033329\tALU_umary_ALU_12574\tC\t<INS:ME:ALU>\t.\tPASS\tAC=25;AF=0.00662252;AFR_AF=0.0229;AMR_AF=0.0038;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0;MEINFO=AluUndef,1,279,+;NS=2504;SAS_AF=0;SVLEN=278;SVTYPE=ALU;TSD=AAGAATACATGCTACC\tGT\t0\nX\t12114294\tBI_GS_DEL1_B2_P2910_77\tA\t<CN0>\t100\tPASS\tAC=62;AF=0.104636;AFR_AF=0.1057;AMR_AF=0.1031;AN=2542;CIEND=-10,11;CIPOS=-10,11;CS=DEL_union;EAS_AF=0.0942;END=12115191;EUR_AF=0.0992;NS=2504;SAS_AF=0.1212;SVTYPE=DEL\tGT\t.\nX\t12211890\tDEL_pindel_53150\tAAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAGGGAAGG\tA\t.\tPASS\tAC=867;AF=0.229669;AFR_AF=0.2124;AMR_AF=0.2195;AN=3775;CS=DEL_pindel;EAS_AF=0.2579;END=12211954;EUR_AF=0.218;NS=2504;SAS_AF=0.2437;SVTYPE=DEL\tGT\t0\nX\t12271780\tDEL_pindel_53153\tTAGTGTAATAATATCTTCAGAGTGCTGGGGGAGAGAGAGAGAAGGGAGGTACAGGTTTCAGG\tT\t.\tPASS\tAC=560;AF=0.148344;AFR_AF=0.1157;AMR_AF=0.1489;AN=3775;CS=DEL_pindel;EAS_AF=0.1924;END=12271841;EUR_AF=0.1201;NS=2504;SAS_AF=0.1769;SVTYPE=DEL\tGT\t0\nX\t12329843\tALU_umary_ALU_12575\tT\t<INS:ME:ALU>\t.\tPASS\tAC=10;AF=0.00264901;AFR_AF=0;AMR_AF=0;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0.0104;MEINFO=AluUndef,2,260,-;NS=2504;SAS_AF=0.0028;SVLEN=258;SVTYPE=ALU;TSD=null\tGT\t0\nX\t12380576\tBI_GS_DEL1_B3_P2910_15\tT\t<CN0>\t100\tPASS\tAC=8;AF=0.00211921;AFR_AF=0.003;AMR_AF=0.0019;AN=2542;CIEND=-17,17;CIPOS=-17,17;CS=DEL_union;EAS_AF=0;END=12394209;EUR_AF=0.0052;MC=YL_CN_GWD_5802,UW_VH_16065;NS=2504;SAS_AF=0;SVTYPE=DEL\tGT\t.\nX\t12384710\tL1_umary_LINE1_3009\tG\t<INS:ME:LINE1>\t.\tPASS\tAC=2;AF=0.0005298;AFR_AF=0;AMR_AF=0;AN=3775;CS=L1_umary;EAS_AF=0;EUR_AF=0;MEINFO=LINE1,4524,5744,+;NS=2504;SAS_AF=0.0028;SVLEN=1220;SVTYPE=LINE1;TSD=null\tGT\t0\nX\t12434234\tBI_GS_DEL1_B4_P2910_84\tC\t<CN0>\t100\tPASS\tAC=21;AF=0.0296689;AFR_AF=0.0269;AMR_AF=0.0267;AN=2542;CIEND=-2,2;CIPOS=-2,2;CS=DEL_union;EAS_AF=0.0314;END=12436825;EUR_AF=0.0418;MC=UW_VH_4163;NS=2504;SAS_AF=0.0209;SVTYPE=DEL\tGT\t.\nX\t12466523\tBI_GS_DEL1_B1_P2910_360\tA\t<CN0>\t100\tPASS\tAC=8;AF=0.00238411;AFR_AF=0.002;AMR_AF=0.0019;AN=2542;CIEND=-8,9;CIPOS=-8,9;CS=DEL_union;EAS_AF=0;END=12483859;EUR_AF=0.0078;MC=YL_CN_FIN_4270;NS=2504;SAS_AF=0;SVTYPE=DEL\tGT\t.\nX\t12490969\tBI_GS_DEL1_B5_P2910_475\tA\t<CN0>\t100\tPASS\tAC=295;AF=0.278411;AFR_AF=0.3599;AMR_AF=0.2863;AN=2542;CIEND=-18,18;CIPOS=-18,18;CS=DEL_union;EAS_AF=0.2225;END=12492265;EUR_AF=0.2493;NS=2504;SAS_AF=0.2493;SVTYPE=DEL\tGT\t.\nX\t13122187\tBI_GS_DEL1_B2_P2911_74\tA\t<CN0>\t100\tPASS\tAC=11;AF=0.00556291;AFR_AF=0.014;AMR_AF=0.0057;AN=2542;CIEND=-1,2;CIPOS=-1,2;CS=DEL_union;EAS_AF=0;END=13125909;EUR_AF=0.0039;MC=YL_CN_ASW_4509,UW_VH_12915;NS=2504;SAS_AF=0.0014;SVTYPE=DEL\tGT\t.\nX\t13167642\tALU_umary_ALU_12576\tT\t<INS:ME:ALU>\t.\tPASS\tAC=6;AF=0.0015894;AFR_AF=0.006;AMR_AF=0;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0;MEINFO=AluUndef,1,281,-;NS=2504;SAS_AF=0;SVLEN=280;SVTYPE=ALU;TSD=null\tGT\t0\nX\t13205696\tDEL_pindel_53154\tATTGTTAATCTCTTACTATGCCTAATTTATGAATTAAACTTTATCATGGGTATGTATGTACAAGAAAAAAACAATGTATATATATATATGGTTTGGTACTATCCAT\tA\t.\tPASS\tAC=1159;AF=0.30702;AFR_AF=0.2981;AMR_AF=0.2958;AN=3775;CS=DEL_pindel;EAS_AF=0.301;END=13205801;EUR_AF=0.2924;NS=2504;SAS_AF=0.3496;SVTYPE=DEL\tGT\t1\nX\t13216928\tDEL_pindel_53155\tAAATAGCAGGCCCTGAAAGAAATCAAAGTATTTTACGCCAAAATATATTTCTTTGACATATTTTGAAATGGCCCTAAAAAGCTGTCTCTTGTGGGGAAAATTTACGTTCTGCAGAGAATGCCCTTCTCTTCCCAGGTCTTTTCCTGATCCAGGAAAGATTAACTAAGATTATAGCACTTTTTTAGGTTTGGTAAGAGACATTTACCATCGAATCTGTCTGAAGCCTGCTACCTGGAGGCTTCATCTGCATAATAAGAACCTTGGTCTCCACAGCCCTTTACTTTAACCCAGATGCTCCTTTCT\tA\t.\tPASS\tAC=432;AF=0.114437;AFR_AF=0.0728;AMR_AF=0.1183;AN=3775;CS=DEL_pindel;EAS_AF=0.1479;END=13217230;EUR_AF=0.1214;NS=2504;SAS_AF=0.1267;SVTYPE=DEL\tGT\t1\nX\t13244329\tL1_umary_LINE1_3010\tC\t<INS:ME:LINE1>\t.\tPASS\tAC=1;AF=0.0002649;AFR_AF=0;AMR_AF=0;AN=3775;CS=L1_umary;EAS_AF=0.0013;EUR_AF=0;MEINFO=LINE1,3299,5310,-;NS=2504;SAS_AF=0;SVLEN=2011;SVTYPE=LINE1;TSD=null\tGT\t0\nX\t13319978\tALU_umary_ALU_12577\tT\t<INS:ME:ALU>\t.\tPASS\tAC=11;AF=0.00291391;AFR_AF=0.011;AMR_AF=0;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0;MEINFO=AluUndef,1,277,+;NS=2504;SAS_AF=0;SVLEN=276;SVTYPE=ALU;TSD=null\tGT\t0\nX\t13419363\tUW_VH_5823\tT\t<CN0>\t100\tPASS\tAC=8;AF=0.0193377;AFR_AF=0.015;AMR_AF=0.0286;AN=2542;CIEND=0,172;CIPOS=-214,0;CS=DEL_union;EAS_AF=0.0118;END=13421005;EUR_AF=0.0248;NS=2504;SAS_AF=0.0209;SVTYPE=DEL\tGT\t.\nX\t13420981\tBI_GS_DEL1_B2_P2911_245\tT\t<CN0>\t100\tPASS\tAC=92;AF=0.15894;AFR_AF=0.1555;AMR_AF=0.1622;AN=2542;CIEND=-23,23;CIPOS=-23,23;CS=DEL_union;EAS_AF=0.1204;END=13421696;EUR_AF=0.1567;NS=2504;SAS_AF=0.2047;SVTYPE=DEL\tGT\t.\nX\t13506501\tBI_GS_DEL1_B5_P2911_482\tC\t<CN0>\t100\tPASS\tAC=10;AF=0.0217218;AFR_AF=0.013;AMR_AF=0.0134;AN=2542;CIEND=-21,22;CIPOS=-21,22;CS=DEL_union;EAS_AF=0.0223;END=13508250;EUR_AF=0.0326;NS=2504;SAS_AF=0.0279;SVTYPE=DEL\tGT\t.\nX\t13697604\tYL_CN_ITU_4634\tA\t<CN0>\t100\tPASS\tAC=4;AF=0.00264901;AFR_AF=0.003;AMR_AF=0;AN=2542;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0.0039;END=13701494;EUR_AF=0.0039;NS=2504;SAS_AF=0.0014;SVTYPE=DEL\tGT\t.\nX\t13824329\tALU_umary_ALU_12578\tT\t<INS:ME:ALU>\t.\tPASS\tAC=4;AF=0.0010596;AFR_AF=0;AMR_AF=0;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0;MEINFO=AluUndef,1,280,-;NS=2504;SAS_AF=0.0056;SVLEN=279;SVTYPE=ALU;TSD=null\tGT\t0\nX\t13829184\tDUP_gs.X_CNV_X_13829184_13947990\tA\t<CN0>,<CN2>\t.\tPASS\tAC=0,3;AF=0,0.0007947;AFR_AF=0,0.002;AMR_AF=0,0;AN=3775;CS=DUP_gs;EAS_AF=0,0;END=13947990;EUR_AF=0,0;NS=2504;SAS_AF=0,0.0014;SVTYPE=DUP\tGT\t0\nX\t13843175\tALU_umary_ALU_12579\tT\t<INS:ME:ALU>\t.\tPASS\tAC=7;AF=0.0018543;AFR_AF=0.007;AMR_AF=0;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0;MEINFO=AluUndef,1,280,-;NS=2504;SAS_AF=0;SVLEN=279;SVTYPE=ALU;TSD=CTGTGTCTCTTCTT\tGT\t0\nX\t13857169\tUW_VH_16825\tA\t<CN0>\t100\tPASS\tAC=9;AF=0.00264901;AFR_AF=0.007;AMR_AF=0;AN=2542;CIEND=0,192;CIPOS=-179,0;CS=DEL_union;EAS_AF=0;END=13863380;EUR_AF=0.0039;MC=BI_GS_DEL1_B3_P2911_17,YL_CN_GWD_5803;NS=2504;SAS_AF=0;SVTYPE=DEL\tGT\t.\nX\t13872906\tBI_GS_DEL1_B5_P2911_849\tT\t<CN0>\t100\tPASS\tAC=6;AF=0.00609272;AFR_AF=0.005;AMR_AF=0.0019;AN=2542;CIEND=-3,3;CIPOS=-3,3;CS=DEL_union;EAS_AF=0.0079;END=13875303;EUR_AF=0.0078;NS=2504;SAS_AF=0.007;SVTYPE=DEL\tGT\t.\nX\t13949683\tDUP_gs.X_CNV_X_13949683_14156025\tT\t<CN0>,<CN2>\t.\tPASS\tAC=0,2;AF=0,0.0005298;AFR_AF=0,0;AMR_AF=0,0;AN=3775;CS=DUP_gs;EAS_AF=0,0;END=14156025;EUR_AF=0,0;NS=2504;SAS_AF=0,0.0028;SVTYPE=DUP\tGT\t0\nX\t14022258\tALU_umary_ALU_12580\tT\t<INS:ME:ALU>\t.\tPASS\tAC=1;AF=0.0002649;AFR_AF=0.001;AMR_AF=0;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0;MEINFO=AluUndef,3,275,-;NS=2504;SAS_AF=0;SVLEN=272;SVTYPE=ALU;TSD=null\tGT\t0\nX\t14110172\tDUP_gs.X_CNV_X_14110172_14117365\tC\t<CN0>,<CN2>\t.\tPASS\tAC=3,2;AF=0.0007947,0.0005298;AFR_AF=0,0;AMR_AF=0,0.0019;AN=3775;CS=DUP_gs;EAS_AF=0.0013,0;END=14117365;EUR_AF=0,0;NS=2504;SAS_AF=0.0028,0.0014;SVTYPE=CNV\tGT\t0\nX\t14110735\tYL_CN_CHS_4693\tT\t<CN0>\t100\tPASS\tAC=9;AF=0.00238411;AFR_AF=0.003;AMR_AF=0.0019;AN=2542;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0.0013;END=14140814;EUR_AF=0.0052;MC=BI_GS_DEL1_B1_P2912_80;NS=2504;SAS_AF=0;SVTYPE=DEL\tGT\t.\nX\t14147644\tDUP_gs.X_CNV_X_14147644_14366811\tT\t<CN0>,<CN2>\t.\tPASS\tAC=0,1;AF=0,0.0002649;AFR_AF=0,0;AMR_AF=0,0;AN=3775;CS=DUP_gs;EAS_AF=0,0;END=14366811;EUR_AF=0,0;NS=2504;SAS_AF=0,0.0014;SVTYPE=DUP\tGT\t0\nX\t14152015\tL1_umary_LINE1_3011\tT\t<INS:ME:LINE1>\t.\tPASS\tAC=628;AF=0.166358;AFR_AF=0.1904;AMR_AF=0.0821;AN=3775;CS=L1_umary;EAS_AF=0.1492;EUR_AF=0.1436;MEINFO=LINE1,4982,6010,-;NS=2504;SAS_AF=0.2368;SVLEN=1028;SVTYPE=LINE1;TSD=TCTCTTTTCTTATT\tGT\t0\nX\t14183240\tALU_umary_ALU_12581\tA\t<INS:ME:ALU>\t.\tPASS\tAC=3;AF=0.0007947;AFR_AF=0;AMR_AF=0.0019;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0.0026;MEINFO=AluUndef,30,281,+;NS=2504;SAS_AF=0;SVLEN=251;SVTYPE=ALU;TSD=null\tGT\t0\nX\t14240900\tDEL_pindel_53165\tGTATATCTATATATTTATATAGATATACTATATATTTATTTTATAGTATATATTTATATTTA\tG\t.\tPASS\tAC=1016;AF=0.269139;AFR_AF=0.2323;AMR_AF=0.2595;AN=3775;CS=DEL_pindel;EAS_AF=0.305;END=14240961;EUR_AF=0.2611;NS=2504;SAS_AF=0.2981;SVTYPE=DEL\tGT\t1\nX\t14406055\tDEL_pindel_53168\tTCACAGATTTCCCCCACTTCTCAAGCTTATACCTTTTGTTTTATTCTATATAAGGAG\tT\t.\tPASS\tAC=444;AF=0.117616;AFR_AF=0.0847;AMR_AF=0.126;AN=3775;CS=DEL_pindel;EAS_AF=0.1374;END=14406111;EUR_AF=0.1201;NS=2504;SAS_AF=0.1337;SVTYPE=DEL\tGT\t1\nX\t14432731\tL1_umary_LINE1_3012\tA\t<INS:ME:LINE1>\t.\tPASS\tAC=15;AF=0.00397351;AFR_AF=0;AMR_AF=0.0095;AN=3775;CS=L1_umary;EAS_AF=0;EUR_AF=0.0039;MEINFO=LINE1,4743,5956,-;NS=2504;SAS_AF=0.0097;SVLEN=1213;SVTYPE=LINE1;TSD=TAGA\tGT\t0\nX\t14596377\tL1_umary_LINE1_3013\tG\t<INS:ME:LINE1>\t.\tPASS\tAC=3;AF=0.0007947;AFR_AF=0;AMR_AF=0;AN=3775;CS=L1_umary;EAS_AF=0;EUR_AF=0;MEINFO=LINE1,24,5923,-;NS=2504;SAS_AF=0.0042;SVLEN=5899;SVTYPE=LINE1;TSD=null\tGT\t0\nX\t14797755\tBI_GS_DEL1_B5_P2912_728\tA\t<CN0>\t100\tPASS\tAC=80;AF=0.0527152;AFR_AF=0.1276;AMR_AF=0.0363;AN=2542;CIEND=0,1;CIPOS=0,1;CS=DEL_union;EAS_AF=0.0353;END=14799414;EUR_AF=0.0209;MC=UW_VH_16732,UW_VH_9717,EM_DL_DEL101164044;NS=2504;SAS_AF=0.0125;SVTYPE=DEL\tGT\t.\nX\t14836235\tALU_umary_ALU_12582\tA\t<INS:ME:ALU>\t.\tPASS\tAC=1;AF=0.0002649;AFR_AF=0;AMR_AF=0;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0.0013;MEINFO=AluUndef,35,281,+;NS=2504;SAS_AF=0;SVLEN=246;SVTYPE=ALU;TSD=AAAATT\tGT\t0\nX\t14917253\tALU_umary_ALU_12583\tC\t<INS:ME:ALU>\t.\tPASS\tAC=412;AF=0.109139;AFR_AF=0.0299;AMR_AF=0.1202;AN=3775;CS=ALU_umary;EAS_AF=0.0432;EUR_AF=0.2441;MEINFO=AluUndef,1,268,-;NS=2504;SAS_AF=0.1379;SVLEN=267;SVTYPE=ALU;TSD=GAACTAGAAAGTCTTTC\tGT\t0\nX\t15050739\tALU_umary_ALU_12584\tT\t<INS:ME:ALU>\t.\tPASS\tAC=92;AF=0.0243709;AFR_AF=0.0698;AMR_AF=0.0076;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0.0065;MEINFO=AluUndef,1,281,-;NS=2504;SAS_AF=0.0181;SVLEN=280;SVTYPE=ALU;TSD=AACAGCTTGCTTTT\tGT\t0\nX\t15105544\tBI_GS_DEL1_B2_P2913_55\tT\t<CN0>\t100\tPASS\tAC=6;AF=0.0018543;AFR_AF=0.003;AMR_AF=0.0019;AN=2542;CIEND=-5,6;CIPOS=-5,6;CS=DEL_union;EAS_AF=0;END=15114913;EUR_AF=0.0039;MC=YL_CN_PEL_4316;NS=2504;SAS_AF=0;SVTYPE=DEL\tGT\t.\nX\t15175768\tL1_umary_LINE1_3014\tG\t<INS:ME:LINE1>\t.\tPASS\tAC=1;AF=0.0002649;AFR_AF=0;AMR_AF=0.0019;AN=3775;CS=L1_umary;EAS_AF=0;EUR_AF=0;MEINFO=LINE1,4275,4522,-;NS=2504;SAS_AF=0;SVLEN=247;SVTYPE=LINE1;TSD=null\tGT\t0\nX\t15189176\tDUP_gs.X_CNV_X_15189176_15292014\tC\t<CN0>,<CN2>\t.\tPASS\tAC=0,1;AF=0,0.0002649;AFR_AF=0,0;AMR_AF=0,0;AN=3775;CS=DUP_gs;EAS_AF=0,0;END=15292014;EUR_AF=0,0;NS=2504;SAS_AF=0,0.0014;SVTYPE=DUP\tGT\t0\nX\t15238353\tDEL_pindel_53179\tGCTGTGTTGCTGTTGATTATCATATTGATGATAGCGAAATCACATGGTCACTCCTCAGTTCTTATGTTTTAGAGTTGTTGGTGTACAAGTGGCATTTACATCGCAGGGCTGGATAAGACTACATGGAGGAGAGAGAGACAGAAAGAGAGGGAGAGAACTGAGCCCTTCAAAATTATAAAATCAGGGACATGAATAAAATCATCAAAAGATCCTTCAGTTTGTTGTTCCCTTCTCATGCTGCATATACTCTCTGGGAATT\tG\t.\tPASS\tAC=474;AF=0.125563;AFR_AF=0.1127;AMR_AF=0.1584;AN=3775;CS=DEL_pindel;EAS_AF=0.123;END=15238611;EUR_AF=0.1319;NS=2504;SAS_AF=0.1156;SVTYPE=DEL\tGT\t1\nX\t15246394\tUW_VH_6507\tA\t<CN0>\t100\tPASS\tAC=17;AF=0.0341722;AFR_AF=0.0249;AMR_AF=0.0382;AN=2542;CIEND=0,332;CIPOS=-323,0;CS=DEL_union;EAS_AF=0.0497;END=15247968;EUR_AF=0.0235;MC=BI_GS_DEL1_B4_P2913_35;NS=2504;SAS_AF=0.039;SVTYPE=DEL\tGT\t.\nX\t15347791\tDEL_pindel_53181\tACAGGTTTTCAAATAGCACTCAGAAGACACTGTTTTTTATAACCAGACTGTGTCAGACTTTTAGTAAACAAGCCTCCACACATTCAACTGCAGTGTCCATTAAGTGCTGTAGAGGTACAAAAAACAGCCTCCTTGGCCAGGTGCAGTGGCTCACGCCTGTTAATCC\tA\t.\tPASS\tAC=840;AF=0.222517;AFR_AF=0.2084;AMR_AF=0.2214;AN=3775;CS=DEL_pindel;EAS_AF=0.2238;END=15347956;EUR_AF=0.2193;NS=2504;SAS_AF=0.2451;SVTYPE=DEL\tGT\t0\nX\t15355982\tDUP_gs.X_CNV_X_15355982_15361333\tA\t<CN0>,<CN2>\t.\tPASS\tAC=0,1;AF=0,0.0002649;AFR_AF=0,0;AMR_AF=0,0;AN=3775;CS=DUP_gs;EAS_AF=0,0;END=15361333;EUR_AF=0,0;NS=2504;SAS_AF=0,0.0014;SVTYPE=DUP\tGT\t0\nX\t15419482\tALU_umary_ALU_12585\tG\t<INS:ME:ALU>\t.\tPASS\tAC=78;AF=0.0206622;AFR_AF=0.0588;AMR_AF=0.0153;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0;MEINFO=AluUndef,20,281,-;NS=2504;SAS_AF=0.0153;SVLEN=261;SVTYPE=ALU;TSD=null\tGT\t0\nX\t15441026\tDEL_pindel_53184\tTGCCTGACTTCAAATTATACTACAGAGCTATAGTAATCAAATCAGCATGGTATTG\tT\t.\tPASS\tAC=34;AF=0.00900662;AFR_AF=0.013;AMR_AF=0.0019;AN=3775;CS=DEL_pindel;EAS_AF=0.0026;END=15441080;EUR_AF=0.0013;NS=2504;SAS_AF=0.0237;SVTYPE=DEL\tGT\t0\nX\t15522467\tDUP_gs.X_CNV_X_15522467_15573276\tT\t<CN0>,<CN2>\t.\tPASS\tAC=0,2;AF=0,0.0005298;AFR_AF=0,0;AMR_AF=0,0;AN=3775;CS=DUP_gs;EAS_AF=0,0;END=15573276;EUR_AF=0,0.0013;NS=2504;SAS_AF=0,0.0014;SVTYPE=DUP\tGT\t0\nX\t15583582\tALU_umary_ALU_12586\tT\t<INS:ME:ALU>\t.\tPASS\tAC=1;AF=0.0002649;AFR_AF=0.001;AMR_AF=0;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0;MEINFO=AluUndef,1,264,-;NS=2504;SAS_AF=0;SVLEN=263;SVTYPE=ALU;TSD=null\tGT\t0\nX\t15626865\tALU_umary_ALU_12587\tG\t<INS:ME:ALU>\t.\tPASS\tAC=14;AF=0.00370861;AFR_AF=0.014;AMR_AF=0;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0;MEINFO=AluUndef,2,281,+;NS=2504;SAS_AF=0;SVLEN=279;SVTYPE=ALU;TSD=AAAAGAGACATCTG\tGT\t0\nX\t15664365\tDUP_gs.X_CNV_X_15664365_15720388\tA\t<CN0>,<CN2>\t.\tPASS\tAC=1,2;AF=0.0002649,0.0005298;AFR_AF=0,0;AMR_AF=0,0;AN=3775;CS=DUP_gs;EAS_AF=0.0013,0;END=15720388;EUR_AF=0,0;NS=2504;SAS_AF=0,0.0028;SVTYPE=CNV\tGT\t0\nX\t15839688\tDEL_pindel_53188\tTTTTCACTTCATGTTCTTTTGAAATACAAGTTGTAAATTTTGATGAAATCCAAC\tT\t.\tPASS\tAC=437;AF=0.115762;AFR_AF=0.0887;AMR_AF=0.105;AN=3775;CS=DEL_pindel;EAS_AF=0.1492;END=15839741;EUR_AF=0.0862;NS=2504;SAS_AF=0.1574;SVTYPE=DEL\tGT\t0\nX\t15975940\tBI_GS_DEL1_B3_P2913_26\tG\t<CN0>\t100\tPASS\tAC=151;AF=0.186225;AFR_AF=0.1964;AMR_AF=0.1603;AN=2542;CIEND=-50,50;CIPOS=-50,50;CS=DEL_union;EAS_AF=0.1741;END=15977108;EUR_AF=0.1175;NS=2504;SAS_AF=0.2772;SVTYPE=DEL\tGT\t.\nX\t16312483\tDEL_pindel_53200\tAATGTTTTTTAAAATTTTGTGGGTAAATAGTAGGTGTATATATTTATGGGGTACATGAGATACTTTGATACAGGCATGCAGTGAGCAACAATCCCATCATGGAAAACGGGGTATCCATCTCCTCAAGCATTTGTTTTTTGTGTTGCAAACAATCCAATTATACTCTTTTAGTTATTTTTAAATATACAATTAAATTATTATTGACTATAATCATCCTGTTGTGCT\tA\t.\tPASS\tAC=1134;AF=0.300397;AFR_AF=0.2981;AMR_AF=0.2824;AN=3775;CS=DEL_pindel;EAS_AF=0.2984;END=16312707;EUR_AF=0.2885;NS=2504;SAS_AF=0.3315;SVTYPE=DEL\tGT\t1\nX\t16360393\tBI_GS_DEL1_B3_P2914_14\tG\t<CN0>\t100\tPASS\tAC=7;AF=0.00238411;AFR_AF=0.003;AMR_AF=0.0019;AN=2542;CIEND=-35,36;CIPOS=-35,36;CS=DEL_union;EAS_AF=0;END=16367091;EUR_AF=0.0052;MC=YL_CN_MSL_3990;NS=2504;SAS_AF=0.0014;SVTYPE=DEL\tGT\t.\nX\t16364231\tDEL_pindel_53201\tCTCTGCTTACATTGTCCATCTGCTCTTGCATGCTGTCTACTTTTTCCATTAGGTCCCTTAACAAATTAATCCTAGTAGTTTTGAACTCACAGTCCGATAATTCCAACATCCCTGCCATA\tC\t.\tPASS\tAC=1128;AF=0.298808;AFR_AF=0.2981;AMR_AF=0.2824;AN=3775;CS=DEL_pindel;EAS_AF=0.2853;END=16364349;EUR_AF=0.295;NS=2504;SAS_AF=0.3301;SVTYPE=DEL\tGT\t1\nX\t16368092\tBI_GS_DEL1_B4_P2914_54\tT\t<CN0>\t100\tPASS\tAC=7;AF=0.00344371;AFR_AF=0.004;AMR_AF=0.0038;AN=2542;CIEND=-24,24;CIPOS=-24,24;CS=DEL_union;EAS_AF=0;END=16370986;EUR_AF=0.0078;NS=2504;SAS_AF=0.0014;SVTYPE=DEL\tGT\t.\nX\t16412216\tUW_VH_9567\tA\t<CN0>\t100\tPASS\tAC=7;AF=0.00238411;AFR_AF=0.004;AMR_AF=0.0019;AN=2542;CIEND=0,119;CIPOS=-153,0;CS=DEL_union;EAS_AF=0;END=16420740;EUR_AF=0.0052;MC=BI_GS_DEL1_B1_P2914_269;NS=2504;SAS_AF=0;SVTYPE=DEL\tGT\t.\nX\t16427679\tDEL_pindel_53203\tTTAAAACAATGATTATCGCATGCTGCTATAAAGACACATGCACACGTATGTTTATTGCGGCACTATTCACAATAGCAAAGACTTGGAACCAACCCAAATGTCCAACAATGATAGACTGGATTAAGAAAATGTGGCACATATACACCATGGAATACTATGCAGCCATAAAAAATGATGAGTTCATATCCTTTGTAGGGACATGGATGAAATTGGAAACCATCATTCTCAGTAAACTATCGCAAGAACAAAAAACCAAACACCGCATATTCTCACTCATAGGTGGGAATTGAACAATGAGATCACATGGACACAGGAAGGGGAATATCACACTCTGGGGACTGTGGTGGGGTCGGGGGAGGGGGGAGGGATAGCATTGGGAGATATACTAATGCTAGATGACACATTAGTGGGTGCAGCGCACCAGCATGGCACATGTATACATATGTAACTAACCTGCACAATGTGCACATGTACCCTAAAACTTAGAGTATAATAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA\tT\t.\tPASS\tAC=2506;AF=0.663841;AFR_AF=0.678;AMR_AF=0.666;AN=3775;CS=DEL_pindel;EAS_AF=0.6558;END=16428212;EUR_AF=0.671;MEINFO=LINE1,5537,5589,+;NS=2504;SAS_AF=0.6435;SVTYPE=DEL_LINE1\tGT\t0\nX\t16472172\tBI_GS_DEL1_B3_P2914_24\tA\t<CN0>\t100\tPASS\tAC=30;AF=0.0116556;AFR_AF=0.0359;AMR_AF=0.0057;AN=2542;CIEND=-2,2;CIPOS=-2,2;CS=DEL_union;EAS_AF=0;END=16479242;EUR_AF=0.0065;MC=YL_CN_CLM_3820,UW_VH_12102;NS=2504;SAS_AF=0;SVTYPE=DEL\tGT\t.\nX\t16533395\tDEL_pindel_53206\tTTATAAAGAAAAGAGGTTTAATTGGCTCACAGTTCTGCAGGCTGTACAGGAAGCATAGTAGCTTCCATTCATCTTCTGGGGAAGCCTCAGGAAACTTACAGTTATGGCAGAAGGTGAAAGGGAAGCAAGCATGTCTTACATGGCCAGAGCACAAGGAAGTGTGG\tT\t.\tPASS\tAC=7;AF=0.0018543;AFR_AF=0.004;AMR_AF=0.0019;AN=3775;CS=DEL_pindel;EAS_AF=0;END=16533558;EUR_AF=0;NS=2504;SAS_AF=0.0028;SVTYPE=DEL\tGT\t0\nX\t16556845\tDEL_pindel_53207\tTTGAGAGGTAGATTGGGGGTCCTTGAGGACATACAGAAATGTGCCTTTAAGGAGCCTCATCCTAAGAAAAGAGACTCATAAAGAACAATTTGGGCACTAGGATAA\tT\t.\tPASS\tAC=1251;AF=0.331391;AFR_AF=0.345;AMR_AF=0.3282;AN=3775;CS=DEL_pindel;EAS_AF=0.3141;END=16556949;EUR_AF=0.3068;NS=2504;SAS_AF=0.3593;SVTYPE=DEL\tGT\t1\nX\t16572843\tALU_umary_ALU_12589\tA\t<INS:ME:ALU>\t.\tPASS\tAC=1;AF=0.0002649;AFR_AF=0;AMR_AF=0;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0;MEINFO=AluY,43,266,-;NS=2504;SAS_AF=0.0014;SVLEN=223;SVTYPE=ALU;TSD=null\tGT\t0\nX\t16596991\tBI_GS_DEL1_B3_P2914_29\tT\t<CN0>\t100\tPASS\tAC=10;AF=0.00370861;AFR_AF=0.002;AMR_AF=0.0019;AN=2542;CIEND=-35,35;CIPOS=-35,35;CS=DEL_union;EAS_AF=0;END=16602321;EUR_AF=0.0117;MC=YL_CN_ITU_4636;NS=2504;SAS_AF=0.0028;SVTYPE=DEL\tGT\t.\nX\t16666286\tDUP_gs.X_CNV_X_16666286_16692414\tC\t<CN0>,<CN2>\t.\tPASS\tAC=0,2;AF=0,0.0005298;AFR_AF=0,0;AMR_AF=0,0.0038;AN=3775;CS=DUP_gs;EAS_AF=0,0;END=16692414;EUR_AF=0,0;NS=2504;SAS_AF=0,0;SVTYPE=DUP\tGT\t0\nX\t16694683\tDEL_pindel_53211\tATAAAGCAAATTGTTCTTACCATGATTTGTCTTTAGTGAAAATGGGAAACTGGAGAGAGAAAAAATTATGTTTCAAGAACTATGGTCTAACTGTTATTATTATGAATTCTAGTCTTATTGGTTGTTTTTGAAGTTTTTTTCTGCAATTTAGACTGACCCTGCTTATTCCTGTGAAACAATCAGTGATCTGTGACTGCAGCTCAGAAAAAAACAAGAGCAGGGCTGGGCGTGGTGGCTCACACCTGTAATCCCAGCACTTTGGGAGGCCAAGGCGGGTGGATAACGAGGTCAAGAGTTCAAGACCAGCCTGGCCAACATGGTGAAACCCGTCTTTACTAAGAATACAAAAATCAGCCAGGCATGGTAGCGCGTGCCTGTAATCCTAGCTACTTGGGAGGCTGAGGCAGAAGAATTGCTTGAACCTGGGAGGCGGAGGTTGCAGTGAGCCGAGATCGCACCACTGCACTCCAGCCTGGGAGACAGAGCAAGACTCTGTCTCGGAAAAAAAAAAAAAAAAAACAAGAGGGATGGGTAACGTAAAAATTGGG\tA\t.\tPASS\tAC=500;AF=0.13245;AFR_AF=0.1117;AMR_AF=0.1279;AN=3775;CS=DEL_pindel;EAS_AF=0.1518;END=16695230;EUR_AF=0.1371;NS=2504;SAS_AF=0.1393;SVTYPE=DEL\tGT\t1\nX\t16935599\tALU_umary_ALU_12590\tA\t<INS:ME:ALU>\t.\tPASS\tAC=3;AF=0.0007947;AFR_AF=0.003;AMR_AF=0;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0;MEINFO=AluUndef,1,279,-;NS=2504;SAS_AF=0;SVLEN=278;SVTYPE=ALU;TSD=null\tGT\t0\nX\t16941924\tALU_umary_ALU_12591\tA\t<INS:ME:ALU>\t.\tPASS\tAC=9;AF=0.00238411;AFR_AF=0.001;AMR_AF=0.0076;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0.0039;MEINFO=AluUndef,1,281,+;NS=2504;SAS_AF=0.0014;SVLEN=280;SVTYPE=ALU;TSD=null\tGT\t0\nX\t16955572\tBI_GS_DEL1_B2_P2914_469\tC\t<CN0>\t100\tPASS\tAC=21;AF=0.0535099;AFR_AF=0.0429;AMR_AF=0.0573;AN=2542;CIEND=-12,12;CIPOS=-12,12;CS=DEL_union;EAS_AF=0.0432;END=16956564;EUR_AF=0.064;NS=2504;SAS_AF=0.0655;SVTYPE=DEL\tGT\t.\nX\t16976416\tALU_umary_ALU_12592\tA\t<INS:ME:ALU>\t.\tPASS\tAC=3;AF=0.0007947;AFR_AF=0.001;AMR_AF=0.0038;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0;MEINFO=AluYa3_1,3,273,-;NS=2504;SAS_AF=0;SVLEN=270;SVTYPE=ALU;TSD=null\tGT\t0\nX\t17186016\tUW_VH_20722\tA\t<CN0>\t100\tPASS\tAC=9;AF=0.00238411;AFR_AF=0.002;AMR_AF=0.0019;AN=2542;CIEND=0,172;CIPOS=-186,0;CS=DEL_union;EAS_AF=0.0013;END=17195233;EUR_AF=0.0065;MC=BI_GS_DEL1_B4_P2915_30,YL_CN_CHB_4616;NS=2504;SAS_AF=0;SVTYPE=DEL\tGT\t.\nX\t17246632\tDUP_gs.X_CNV_X_17246632_17497934\tA\t<CN0>,<CN2>\t.\tPASS\tAC=0,1;AF=0,0.0002649;AFR_AF=0,0;AMR_AF=0,0;AN=3775;CS=DUP_gs;EAS_AF=0,0.0013;END=17497934;EUR_AF=0,0;NS=2504;SAS_AF=0,0;SVTYPE=DUP\tGT\t0\nX\t17349514\tALU_umary_ALU_12593\tT\t<INS:ME:ALU>\t.\tPASS\tAC=12;AF=0.00317881;AFR_AF=0.012;AMR_AF=0;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0;MEINFO=AluUndef,1,281,-;NS=2504;SAS_AF=0;SVLEN=280;SVTYPE=ALU;TSD=CAGTTGTATTTTT\tGT\t0\nX\t17502753\tDEL_pindel_53216\tGGGCTCTGGGGCATCCCAGGGCCAAGTACCAGACAACTAAGGACATCTATGCCTTAGTTGTCTGGTACTT\tG\t.\tPASS\tAC=2319;AF=0.614305;AFR_AF=0.5852;AMR_AF=0.6374;AN=3775;CS=DEL_pindel;EAS_AF=0.5772;END=17502822;EUR_AF=0.6527;NS=2504;SAS_AF=0.6365;SVTYPE=DEL\tGT\t1\nX\t17520616\tDEL_pindel_53217\tTAAGAAGTCAGGGTTGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCGCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAA\tT\t.\tPASS\tAC=2336;AF=0.618808;AFR_AF=0.6042;AMR_AF=0.6279;AN=3775;CS=DEL_pindel;EAS_AF=0.5641;END=17520931;EUR_AF=0.654;MEINFO=AluY,1,281,+;NS=2504;SAS_AF=0.6532;SVTYPE=DEL_ALU\tGT\t1\nX\t17544375\tDEL_pindel_53219\tTGGGCTAGGCCAGGCCAGGTGGTTGTAGCTGGGCTAGCGCATGTGTCCACAATCAGTGATAGGTCAGCTG\tT\t.\tPASS\tAC=219;AF=0.0580132;AFR_AF=0.0259;AMR_AF=0.042;AN=3775;CS=DEL_pindel;EAS_AF=0.0576;END=17544444;EUR_AF=0.0731;NS=2504;SAS_AF=0.0989;SVTYPE=DEL\tGT\t0\nX\t17556037\tDEL_pindel_53221\tGAGGGGAAAACAAAAGGGAAGCTGTTCCCAGCACATCCACAGGAAGGGAGAATTGCAGAGCCAGCCACGGGCAGGAGGGCTTCCTGCTCAGCCTGGCTGTGGAGGCCTCCAGTGCCCCCATCTTGCGGAAGGCCAAGCATTCCC\tG\t.\tPASS\tAC=753;AF=0.19947;AFR_AF=0.2044;AMR_AF=0.1927;AN=3775;CS=DEL_pindel;EAS_AF=0.1937;END=17556180;EUR_AF=0.205;NS=2504;SAS_AF=0.1978;SVTYPE=DEL\tGT\t0\nX\t17637426\tBI_GS_DEL1_B2_P2915_356\tA\t<CN0>\t100\tPASS\tAC=91;AF=0.139338;AFR_AF=0.1386;AMR_AF=0.1469;AN=2542;CIEND=0,1;CIPOS=0,1;CS=DEL_union;EAS_AF=0.1165;END=17638164;EUR_AF=0.1514;MC=UW_VH_8092;NS=2504;SAS_AF=0.1462;SVTYPE=DEL\tGT\t.\nX\t18118310\tBI_GS_DEL1_B4_P2916_22\tA\t<CN0>\t100\tPASS\tAC=7;AF=0.00635762;AFR_AF=0.004;AMR_AF=0.0038;AN=2542;CIEND=-40,40;CIPOS=-40,40;CS=DEL_union;EAS_AF=0.0052;END=18120917;EUR_AF=0.0104;NS=2504;SAS_AF=0.0084;SVTYPE=DEL\tGT\t.\nX\t18168241\tYL_CN_CHB_4619\tC\t<CN0>\t100\tPASS\tAC=8;AF=0.00211921;AFR_AF=0.002;AMR_AF=0;AN=2542;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0.0026;END=18180552;EUR_AF=0.0052;NS=2504;SAS_AF=0;SVTYPE=DEL\tGT\t.\nX\t18278753\tBI_GS_DEL1_B2_P2916_158\tA\t<CN0>\t100\tPASS\tAC=118;AF=0.0643709;AFR_AF=0.1705;AMR_AF=0.0439;AN=2542;CIEND=-64,64;CIPOS=-64,64;CS=DEL_union;EAS_AF=0.0131;END=18280881;EUR_AF=0.0339;NS=2504;SAS_AF=0.0181;SVTYPE=DEL\tGT\t.\nX\t18352754\tL1_umary_LINE1_3015\tG\t<INS:ME:LINE1>\t.\tPASS\tAC=29;AF=0.00768212;AFR_AF=0;AMR_AF=0;AN=3775;CS=L1_umary;EAS_AF=0.0327;EUR_AF=0.0026;MEINFO=LINE1,1,5985,-;NS=2504;SAS_AF=0.0028;SVLEN=5984;SVTYPE=LINE1;TSD=AGCCTTGTGTATTTTG\tGT\t0\nX\t18353048\tDEL_pindel_53225\tTAGGCTGGGTGCAGTGGCTCATGCCTGTAATCCTAGCACTTTGGGAGGCCAAGGCGGGTGGATTTCTTGAGCCCAGCAGTTCAAGATCAGCCTGGGACACTCAGCATCAGAGACACTGATCAATTAAAGACTATAGCCCAGTGGCTAAAGAAACAGACAAGAAAGTAAAATATATACGGGGTGTTGAATCCACACAGATGATAAAGCACTGTAATCCAGGTAGTAAGTGAAGGTACTTACCGACTCTCATCAAAGAGCAAAAACCTGTGAATTACATTAAAATGAGTCTTATC\tT\t.\tPASS\tAC=1055;AF=0.27947;AFR_AF=0.2732;AMR_AF=0.2691;AN=3775;CS=DEL_pindel;EAS_AF=0.2736;END=18353340;EUR_AF=0.2728;NS=2504;SAS_AF=0.3092;SVTYPE=DEL\tGT\t1\nX\t18397745\tDEL_pindel_53226\tAGCTGGGATTACAGGTGGCTGCCACCACGCCAGGCTAATTTTTGTATTTTTAGTAGAGATGGGGTTTCACCATGTTAGCCAGGCTGGTCTCAAACTCCTGACCTCAGGTGATCCACCTGCCTCAGCCTCACGAAGT\tA\t.\tPASS\tAC=762;AF=0.201854;AFR_AF=0.2024;AMR_AF=0.1889;AN=3775;CS=DEL_pindel;EAS_AF=0.2225;END=18397880;EUR_AF=0.201;NS=2504;SAS_AF=0.1894;SVTYPE=DEL\tGT\t1\nX\t18399871\tBI_GS_DEL1_B1_P2916_246\tT\t<CN0>\t100\tPASS\tAC=6;AF=0.00953642;AFR_AF=0.009;AMR_AF=0.0095;AN=2542;CIEND=-19,19;CIPOS=-19,19;CS=DEL_union;EAS_AF=0.0105;END=18401829;EUR_AF=0.0157;NS=2504;SAS_AF=0.0028;SVTYPE=DEL\tGT\t.\nX\t18436800\tDEL_pindel_53227\tATGTATACACATATATATGTGTGTATATATATATACACACACATATATATGTATATACATATATATGTGTGTATACATATATATATGTGTACACATATATATGTGTGTATACACATATATATGTGTACACATATATATGTGTGTATACACATATATATG\tA\t.\tPASS\tAC=1039;AF=0.275232;AFR_AF=0.2772;AMR_AF=0.2615;AN=3775;CS=DEL_pindel;EAS_AF=0.2775;END=18436958;EUR_AF=0.2546;NS=2504;SAS_AF=0.3022;SVTYPE=DEL\tGT\t0\nX\t18436888\tDEL_pindel_53228\tGTACACATATATATGTGTGTATACACATATATATGTGTACACATATATATGTGTGTATACACATATATATGTGTA\tG\t.\tPASS\tAC=907;AF=0.240265;AFR_AF=0.2473;AMR_AF=0.2118;AN=3775;CS=DEL_pindel;EAS_AF=0.2317;END=18436962;EUR_AF=0.2324;NS=2504;SAS_AF=0.2688;SVTYPE=DEL\tGT\t1\nX\t18468816\tBI_GS_DEL1_B4_P2916_61\tT\t<CN0>\t100\tPASS\tAC=10;AF=0.00291391;AFR_AF=0.004;AMR_AF=0;AN=2542;CIEND=-45,46;CIPOS=-45,46;CS=DEL_union;EAS_AF=0.0013;END=18474273;EUR_AF=0.0052;MC=YL_CN_BEB_3666;NS=2504;SAS_AF=0.0028;SVTYPE=DEL\tGT\t.\nX\t18847561\tALU_umary_ALU_12594\tT\t<INS:ME:ALU>\t.\tPASS\tAC=2;AF=0.0005298;AFR_AF=0;AMR_AF=0;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0;MEINFO=AluYb8,2,280,-;NS=2504;SAS_AF=0.0028;SVLEN=278;SVTYPE=ALU;TSD=null\tGT\t0\nX\t18888689\tDUP_gs.X_CNV_X_18888689_18957355\tT\t<CN0>,<CN2>\t.\tPASS\tAC=0,2;AF=0,0.0005298;AFR_AF=0,0.002;AMR_AF=0,0;AN=3775;CS=DUP_gs;EAS_AF=0,0;END=18957355;EUR_AF=0,0;NS=2504;SAS_AF=0,0;SVTYPE=DUP\tGT\t0\nX\t18952948\tALU_umary_ALU_12595\tA\t<INS:ME:ALU>\t.\tPASS\tAC=21;AF=0.00556291;AFR_AF=0.001;AMR_AF=0.0038;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0.0209;MEINFO=AluYe5,1,280,+;NS=2504;SAS_AF=0.0028;SVLEN=279;SVTYPE=ALU;TSD=null\tGT\t0\nX\t19042771\tDUP_gs.X_CNV_X_19042771_19122398\tA\t<CN0>,<CN2>\t.\tPASS\tAC=0,1;AF=0,0.0002649;AFR_AF=0,0.001;AMR_AF=0,0;AN=3775;CS=DUP_gs;EAS_AF=0,0;END=19122398;EUR_AF=0,0;NS=2504;SAS_AF=0,0;SVTYPE=DUP\tGT\t0\nX\t19073290\tDEL_pindel_53238\tGAGCTTTATAGAGACTGCTTAACCAGCTCCCACAGTTGTATTAGGACAAATCCCTGTAGCAAATCCCTTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATGTGTGTGTGTGTGCGCGCGCACGCGCGTGCACGCACCTTAGTGGTTCTCCTGTGATTGAATCCTGACTTACACAGTTTGAGATAGAAACCTTCTGAAGCAATTAGATTAAATGGTCTATAACTGTGCTGTCCAACATGGTAGCCATTAGCTACATGTGGCTATTTAAATTTAAATTAATTAAAGTTAAACATAATTAGAATTTAGTACCCCAGTCAAGTTTCAAGTGCTCAATACTGTGGTCACATGTGGCTGGTGGCCACTGTTTTGGGCAGCACAGATATAGAGCACTTCCGTTATTGCAAAAAAATGTTCTATGAGCACTGGTCTATAGTGATAATTACTAGTATTTACTGAGTTCTCACCATGTGTCAGATGCAGATTCCAAGTTTGCTCTGGAGAGCACGATGCGGCAGGCAAACGGGGAAAGAGAGAGAGTGATGGGAATCAGGTGGGAGATTTTTTTTTTTTTTTTTGAGATGGAGTCTCTCTCACTCTGTCACCCAGGCTGGAGTGCAGTGGCACAATATCGGATCACTGCAACCTCCGCCTCCCAGGTTCAAGTGATTCTCCTGCCTCAGTCTCCCAAGT\tG\t.\tPASS\tAC=80;AF=0.021192;AFR_AF=0.0299;AMR_AF=0.021;AN=3775;CS=DEL_pindel;EAS_AF=0.0079;END=19073980;EUR_AF=0.0313;NS=2504;SAS_AF=0.0125;SVTYPE=DEL\tGT\t1\nX\t19127122\tBI_GS_DEL1_B1_P2917_81\tG\t<CN0>\t100\tPASS\tAC=7;AF=0.00211921;AFR_AF=0.003;AMR_AF=0.0019;AN=2542;CIEND=-13,13;CIPOS=-13,13;CS=DEL_union;EAS_AF=0;END=19135848;EUR_AF=0.0052;MC=YL_CN_GBR_4488,UW_VH_4231;NS=2504;SAS_AF=0;SVTYPE=DEL\tGT\t.\nX\t19283463\tDUP_gs.X_CNV_X_19283463_19381414\tC\t<CN0>,<CN2>\t.\tPASS\tAC=0,1;AF=0,0.0002649;AFR_AF=0,0.001;AMR_AF=0,0;AN=3775;CS=DUP_gs;EAS_AF=0,0;END=19381414;EUR_AF=0,0;NS=2504;SAS_AF=0,0;SVTYPE=DUP\tGT\t0\nX\t19357192\tALU_umary_ALU_12596\tT\t<INS:ME:ALU>\t.\tPASS\tAC=44;AF=0.0116556;AFR_AF=0.0419;AMR_AF=0.0019;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0.0013;MEINFO=AluYb11,1,281,+;NS=2504;SAS_AF=0;SVLEN=280;SVTYPE=ALU;TSD=AAAGAACTATTCCT\tGT\t0\nX\t19374800\tDEL_pindel_53242\tGAATGTAGTTGTAGAATGTGTGACTTTCCCAAACAGATAACCTTCACAATTCTGAGTTAGGTGTTATTGTTTTGCCCATTTTGCAGACAAGGAAACTGAGCCATAGAGCAGTTAAAGGTACACAGCTACTCTGTCTT\tG\t.\tPASS\tAC=1628;AF=0.431258;AFR_AF=0.7009;AMR_AF=0.3569;AN=3775;CS=DEL_pindel;EAS_AF=0.3168;END=19374936;EUR_AF=0.312;NS=2504;SAS_AF=0.3579;SVTYPE=DEL\tGT\t1\nX\t19411868\tDEL_pindel_53244\tCTGCCTGGCTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAAGACGGAGTCTCACTGTGTAACCTAGAATGGAGTGGAGTGGTA\tC\t.\tPASS\tAC=1066;AF=0.282384;AFR_AF=0.2941;AMR_AF=0.2653;AN=3775;CS=DEL_pindel;EAS_AF=0.2618;END=19411952;EUR_AF=0.2663;NS=2504;SAS_AF=0.3175;SVTYPE=DEL\tGT\t1\nX\t19435029\tDUP_gs.X_CNV_X_19435029_19488491\tT\t<CN0>,<CN2>\t.\tPASS\tAC=0,2;AF=0,0.0005298;AFR_AF=0,0.001;AMR_AF=0,0;AN=3775;CS=DUP_gs;EAS_AF=0,0.0013;END=19488491;EUR_AF=0,0;NS=2504;SAS_AF=0,0;SVTYPE=DUP\tGT\t0\nX\t19466074\tDUP_gs.X_CNV_X_19466074_19469129\tT\t<CN0>,<CN2>\t.\tPASS\tAC=134,3;AF=0.0354967,0.0007947;AFR_AF=0.003,0.001;AMR_AF=0.0286,0;AN=3775;CS=DUP_gs;EAS_AF=0,0.0013;END=19469129;EUR_AF=0.0679,0;MC=YL_CN_GBR_4489,BI_GS_DEL1_B1_P2917_289;NS=2504;SAS_AF=0.0891,0.0014;SVTYPE=CNV\tGT\t0\nX\t19470192\tDEL_pindel_53247\tAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAG\tA\t.\tPASS\tAC=963;AF=0.255099;AFR_AF=0.2114;AMR_AF=0.2538;AN=3775;CS=DEL_pindel;EAS_AF=0.2631;END=19470468;EUR_AF=0.2507;NS=2504;SAS_AF=0.3134;SVTYPE=DEL\tGT\t0\nX\t19540241\tDUP_gs.X_CNV_X_19540241_19635153\tT\t<CN0>,<CN2>\t.\tPASS\tAC=0,1;AF=0,0.0002649;AFR_AF=0,0.001;AMR_AF=0,0;AN=3775;CS=DUP_gs;EAS_AF=0,0;END=19635153;EUR_AF=0,0;NS=2504;SAS_AF=0,0;SVTYPE=DUP\tGT\t0\nX\t19635311\tDEL_pindel_53255\tATGTAAAACTCACTTTTATGCTTCCCTTGTCTCCAGGATCACATTCTTGTGATATGTATTGTCCAATGCCTAAAAACAGCCACTTTGTATGTTTTGGCCAATGTTAGAGTTGTCTATGACAGGAAGGCAAGTCTAATTACCCTTTACTCTATAATAGCCGCAACCCCAAGTTATATATTCCCTCAAAAAGATTGTTTCTTCATTTAGACTGGACTTTTTCATTCTAGATATAATAGAACTTTCAGCTCTATCTTTAAAAGTCTGAGCTATTTCAAGGTCTAATTCCCAAAAGAAGTCCTAGAGAAAGAATG\tA\t.\tPASS\tAC=588;AF=0.155762;AFR_AF=0.1376;AMR_AF=0.1546;AN=3775;CS=DEL_pindel;EAS_AF=0.1649;END=19635621;EUR_AF=0.154;NS=2504;SAS_AF=0.1741;SVTYPE=DEL\tGT\t0\nX\t19829295\tBI_GS_DEL1_B3_P2917_32\tA\t<CN0>\t100\tPASS\tAC=19;AF=0.0127152;AFR_AF=0.0239;AMR_AF=0.0115;AN=2542;CIEND=0,1;CIPOS=0,1;CS=DEL_union;EAS_AF=0.0039;END=19831199;EUR_AF=0.017;MC=UW_VH_12500;NS=2504;SAS_AF=0.0028;SVTYPE=DEL\tGT\t.\nX\t19946495\tBI_GS_DEL1_B3_P2917_34\tG\t<CN0>\t100\tPASS\tAC=8;AF=0.0198676;AFR_AF=0.011;AMR_AF=0.021;AN=2542;CIEND=-17,17;CIPOS=-17,17;CS=DEL_union;EAS_AF=0.017;END=19948330;EUR_AF=0.0235;NS=2504;SAS_AF=0.0306;SVTYPE=DEL\tGT\t.\nX\t20138974\tDUP_gs.X_CNV_X_20138974_20152179\tG\t<CN0>,<CN2>\t.\tPASS\tAC=2,1;AF=0.0005298,0.0002649;AFR_AF=0.002,0;AMR_AF=0,0;AN=3775;CS=DUP_gs;EAS_AF=0,0.0013;END=20152179;EUR_AF=0,0;NS=2504;SAS_AF=0,0;SVTYPE=CNV\tGT\t0\nX\t20174402\tALU_umary_ALU_12597\tT\t<INS:ME:ALU>\t.\tPASS\tAC=5;AF=0.0013245;AFR_AF=0.005;AMR_AF=0;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0;MEINFO=AluUndef,1,270,-;NS=2504;SAS_AF=0;SVLEN=269;SVTYPE=ALU;TSD=null\tGT\t0\nX\t20238579\tDEL_pindel_53265\tCGCCTAACACAGAATGGCAGTCTGAACATGAGGTGGCTCTTGAGACTATGTCAGGAAAAAGCATCATCTTTACTGCACAACTCATGAA\tC\t.\tPASS\tAC=1257;AF=0.33298;AFR_AF=0.348;AMR_AF=0.3244;AN=3775;CS=DEL_pindel;EAS_AF=0.3141;END=20238666;EUR_AF=0.3094;NS=2504;SAS_AF=0.3635;SVTYPE=DEL\tGT\t1\nX\t20263983\tUW_VH_15508\tA\t<CN0>\t100\tPASS\tAC=33;AF=0.0606623;AFR_AF=0.0608;AMR_AF=0.0439;AN=2542;CIEND=0,104;CIPOS=-62,0;CS=DEL_union;EAS_AF=0.0602;END=20265790;EUR_AF=0.0457;MC=BI_GS_DEL1_B3_P2918_7;NS=2504;SAS_AF=0.0891;SVTYPE=DEL\tGT\t.\nX\t20482662\tBI_GS_DEL1_B3_P2918_17\tT\t<CN0>\t100\tPASS\tAC=7;AF=0.00238411;AFR_AF=0.005;AMR_AF=0.0038;AN=2542;CIEND=-5,6;CIPOS=-5,6;CS=DEL_union;EAS_AF=0;END=20486786;EUR_AF=0.0026;MC=YL_CN_MSL_3994;NS=2504;SAS_AF=0;SVTYPE=DEL\tGT\t.\nX\t20597650\tYL_CN_CDX_3801\tG\t<CN0>\t100\tPASS\tAC=9;AF=0.00238411;AFR_AF=0.003;AMR_AF=0.0019;AN=2542;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0.0013;END=20666052;EUR_AF=0.0052;NS=2504;SAS_AF=0;SVTYPE=DEL\tGT\t.\nX\t20754401\tALU_umary_ALU_12598\tA\t<INS:ME:ALU>\t.\tPASS\tAC=2;AF=0.0005298;AFR_AF=0.002;AMR_AF=0;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0;MEINFO=AluUndef,8,281,-;NS=2504;SAS_AF=0;SVLEN=273;SVTYPE=ALU;TSD=null\tGT\t0\nX\t20815391\tDEL_pindel_53273\tCCCCCTTTAAGAGAAATCTCAACCAATCGTTTTCTCTTTGCAGCTTCACTTCAGCTCTTCAAAAGCATTTTCTTTCTTAAAACAGTAGTGGTCATGGGAAACTATG\tC\t.\tPASS\tAC=81;AF=0.0214569;AFR_AF=0.0558;AMR_AF=0.0095;AN=3775;CS=DEL_pindel;EAS_AF=0.0026;END=20815496;EUR_AF=0.017;NS=2504;SAS_AF=0.007;SVTYPE=DEL\tGT\t0\nX\t20860022\tDEL_pindel_53274\tACACTCTTAATCTTCAAGCTGCTATTCCTTTTGAGGAAACAGGAATTTGATGACTCAATGCCCAAGTAGATATTTAAACAATGAAATTGAGAAACTTATTATTTCTTTTACCTTTGTTATCTGTT\tA\t.\tPASS\tAC=1195;AF=0.316556;AFR_AF=0.3091;AMR_AF=0.3092;AN=3775;CS=DEL_pindel;EAS_AF=0.3076;END=20860146;EUR_AF=0.3003;NS=2504;SAS_AF=0.3593;SVTYPE=DEL\tGT\t1\nX\t20886928\tBI_GS_DEL1_B1_P2918_597\tC\t<CN0>\t100\tPASS\tAC=326;AF=0.306755;AFR_AF=0.3031;AMR_AF=0.2939;AN=2542;CIEND=0,1;CIPOS=0,1;CS=DEL_union;EAS_AF=0.2552;END=20887286;EUR_AF=0.3538;NS=2504;SAS_AF=0.3259;SVTYPE=DEL\tGT\t.\nX\t20923183\tALU_umary_ALU_12599\tG\t<INS:ME:ALU>\t.\tPASS\tAC=32;AF=0.00847682;AFR_AF=0.0319;AMR_AF=0;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0;MEINFO=AluUndef,1,262,+;NS=2504;SAS_AF=0;SVLEN=261;SVTYPE=ALU;TSD=AACTCCTAGGCTG\tGT\t0\nX\t21015832\tALU_umary_ALU_12600\tA\t<INS:ME:ALU>\t.\tPASS\tAC=11;AF=0.00291391;AFR_AF=0.007;AMR_AF=0.0057;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0.0013;MEINFO=AluUndef,1,278,-;NS=2504;SAS_AF=0;SVLEN=277;SVTYPE=ALU;TSD=AAAAAA\tGT\t0\nX\t21016021\tDEL_pindel_53276\tTATGATAAATTTTAGCCCTAAAATAAAATGACTGGTTATTTAAGAAGGAGGGATGTTC\tT\t.\tPASS\tAC=727;AF=0.192583;AFR_AF=0.1825;AMR_AF=0.1832;AN=3775;CS=DEL_pindel;EAS_AF=0.2134;END=21016078;EUR_AF=0.1658;NS=2504;SAS_AF=0.2201;SVTYPE=DEL\tGT\t1\nX\t21254191\tDEL_pindel_53279\tCATATATGTGTGTATGTATATATATATATATATATATATATATATATATATAT\tC\t.\tPASS\tAC=1203;AF=0.318675;AFR_AF=0.2871;AMR_AF=0.3225;AN=3775;CS=DEL_pindel;EAS_AF=0.3128;END=21254243;EUR_AF=0.3029;NS=2504;SAS_AF=0.383;SVTYPE=DEL\tGT\t1\nX\t21286749\tBI_GS_DEL1_B3_P2919_7\tT\t<CN0>\t100\tPASS\tAC=9;AF=0.00291391;AFR_AF=0.002;AMR_AF=0.0019;AN=2542;CIEND=-4,5;CIPOS=-4,5;CS=DEL_union;EAS_AF=0;END=21298165;EUR_AF=0.0065;MC=YL_CN_ITU_4639;NS=2504;SAS_AF=0.0042;SVTYPE=DEL\tGT\t.\nX\t21300882\tYL_CN_JPT_4678\tA\t<CN0>\t100\tPASS\tAC=9;AF=0.00238411;AFR_AF=0.002;AMR_AF=0.0019;AN=2542;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0.0013;END=21347108;EUR_AF=0.0065;NS=2504;SAS_AF=0;SVTYPE=DEL\tGT\t.\nX\t21322861\tDEL_pindel_53282\tGTGTGTGTATATATATACACATATGTGTATATATGTGTGTGTATATATATACACATA\tG\t.\tPASS\tAC=1016;AF=0.269139;AFR_AF=0.2672;AMR_AF=0.2366;AN=3775;CS=DEL_pindel;EAS_AF=0.2696;END=21322917;EUR_AF=0.2533;NS=2504;SAS_AF=0.312;SVTYPE=DEL\tGT\t1\nX\t21357610\tUW_VH_9558\tA\t<CN0>\t100\tPASS\tAC=54;AF=0.0384106;AFR_AF=0.0758;AMR_AF=0.0382;AN=2542;CIEND=0,320;CIPOS=-308,0;CS=DEL_union;EAS_AF=0.0262;END=21361255;EUR_AF=0.0274;MC=BI_GS_DEL1_B5_P2919_267,YL_CN_YRI_5519;NS=2504;SAS_AF=0.0111;SVTYPE=DEL\tGT\t.\nX\t21453093\tL1_umary_LINE1_3018\tT\t<INS:ME:LINE1>\t.\tPASS\tAC=1;AF=0.0002649;AFR_AF=0;AMR_AF=0;AN=3775;CS=L1_umary;EAS_AF=0;EUR_AF=0;MEINFO=LINE1,5582,5779,-;NS=2504;SAS_AF=0.0014;SVLEN=197;SVTYPE=LINE1;TSD=null\tGT\t0\nX\t21485800\tALU_umary_ALU_12601\tG\t<INS:ME:ALU>\t.\tPASS\tAC=26;AF=0.00688742;AFR_AF=0.0249;AMR_AF=0.0019;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0;MEINFO=AluUndef,8,281,-;NS=2504;SAS_AF=0;SVLEN=273;SVTYPE=ALU;TSD=null\tGT\t0\nX\t21800758\tDEL_pindel_53290\tGGGCCCTAATCCAATACAACTGGTGTCCTTATGAAAAGGGAAAATCCTGACACAGATATGCACACAGGGAGAAGAATACAATGTGAACACCAAGGCAGGTATCAGGGTAATGAACCTGCAAGTCACGAAGGCCAAATATTGCCAGCAAACCACTAGAAAGTTA\tG\t.\tPASS\tAC=1208;AF=0.32;AFR_AF=0.2951;AMR_AF=0.3111;AN=3775;CS=DEL_pindel;EAS_AF=0.3102;END=21800920;EUR_AF=0.3316;NS=2504;SAS_AF=0.3593;SVTYPE=DEL\tGT\t1\nX\t21865704\tALU_umary_ALU_12602\tT\t<INS:ME:ALU>\t.\tPASS\tAC=4;AF=0.0010596;AFR_AF=0;AMR_AF=0.0076;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0;MEINFO=AluUndef,2,276,-;NS=2504;SAS_AF=0;SVLEN=274;SVTYPE=ALU;TSD=TGGTATT\tGT\t0\nX\t21884420\tALU_umary_ALU_12603\tG\t<INS:ME:ALU>\t.\tPASS\tAC=17;AF=0.00450331;AFR_AF=0;AMR_AF=0.0057;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0.0183;MEINFO=AluYb9,15,276,+;NS=2504;SAS_AF=0;SVLEN=261;SVTYPE=ALU;TSD=GAAAAGTGTTCTAG\tGT\t0\nX\t22035562\tDUP_gs.X_CNV_X_22035562_22040699\tG\t<CN0>,<CN2>\t.\tPASS\tAC=0,12;AF=0,0.00317881;AFR_AF=0,0.012;AMR_AF=0,0;AN=3775;CS=DUP_gs;EAS_AF=0,0;END=22040699;EUR_AF=0,0;NS=2504;SAS_AF=0,0;SVTYPE=DUP\tGT\t0\nX\t22037606\tDEL_pindel_53294\tAGGGGATGTGCCTGTGTCCCTTTCTAAAACACAGTTTTTATCTCTGAGACTACTAATGTTCTGTTTAAACTTGCTCAGAGCTCACATCCAGGGCCCAT\tA\t.\tPASS\tAC=765;AF=0.202649;AFR_AF=0.1805;AMR_AF=0.2195;AN=3775;CS=DEL_pindel;EAS_AF=0.2277;END=22037703;EUR_AF=0.1854;NS=2504;SAS_AF=0.2131;SVTYPE=DEL\tGT\t1\nX\t22339982\tDEL_pindel_53297\tTTATTAAGAGGGCTAGCTGAAAAACATCATAGTATTTTGTTTGATTTAAACTACTGGTCTCA\tT\t.\tPASS\tAC=87;AF=0.0230464;AFR_AF=0.016;AMR_AF=0.0191;AN=3775;CS=DEL_pindel;EAS_AF=0.0275;END=22340043;EUR_AF=0.017;NS=2504;SAS_AF=0.0376;SVTYPE=DEL\tGT\t0\nX\t22365083\tALU_umary_ALU_12604\tT\t<INS:ME:ALU>\t.\tPASS\tAC=211;AF=0.055894;AFR_AF=0.0169;AMR_AF=0.0076;AN=3775;CS=ALU_umary;EAS_AF=0.0877;EUR_AF=0.03;MEINFO=AluYa4_5,1,281,-;NS=2504;SAS_AF=0.1393;SVLEN=280;SVTYPE=ALU;TSD=GCTTCCTTTCTTTTT\tGT\t1\nX\t22369769\tL1_umary_LINE1_3019\tT\t<INS:ME:LINE1>\t.\tPASS\tAC=1;AF=0.0002649;AFR_AF=0;AMR_AF=0;AN=3775;CS=L1_umary;EAS_AF=0.0013;EUR_AF=0;MEINFO=LINE1,70,5787,+;NS=2504;SAS_AF=0;SVLEN=5717;SVTYPE=LINE1;TSD=AAATACTTTTTTTTT\tGT\t0\nX\t22377636\tBI_GS_DEL1_B4_P2920_49\tT\t<CN0>\t100\tPASS\tAC=280;AF=0.29351;AFR_AF=0.2841;AMR_AF=0.2576;AN=2542;CIEND=-19,20;CIPOS=-19,20;CS=DEL_union;EAS_AF=0.3338;END=22378087;EUR_AF=0.282;NS=2504;SAS_AF=0.3022;SVTYPE=DEL\tGT\t.\nX\t22388080\tUW_VH_17280\tG\t<CN0>\t100\tPASS\tAC=8;AF=0.0161589;AFR_AF=0.015;AMR_AF=0.0248;AN=2542;CIEND=0,257;CIPOS=-270,0;CS=DEL_union;EAS_AF=0.0223;END=22390197;EUR_AF=0.0144;MC=BI_GS_DEL1_B3_P2920_9;NS=2504;SAS_AF=0.007;SVTYPE=DEL\tGT\t.\nX\t22492009\tDUP_gs.X_CNV_X_22492009_22497620\tT\t<CN0>,<CN2>\t.\tPASS\tAC=7,1;AF=0.0018543,0.0002649;AFR_AF=0.007,0;AMR_AF=0,0;AN=3775;CS=DUP_gs;EAS_AF=0,0;END=22497620;EUR_AF=0,0.0013;NS=2504;SAS_AF=0,0;SVTYPE=CNV\tGT\t0\nX\t22492030\tBI_GS_DEL1_B5_P2920_447\tA\t<CN0>\t100\tPASS\tAC=13;AF=0.00344371;AFR_AF=0.009;AMR_AF=0.0019;AN=2542;CIEND=0,1;CIPOS=0,1;CS=DEL_union;EAS_AF=0;END=22497716;EUR_AF=0.0039;MC=UW_VH_22425,YL_CN_YRI_5521;NS=2504;SAS_AF=0;SVTYPE=DEL\tGT\t.\nX\t22504994\tALU_umary_ALU_12605\tT\t<INS:ME:ALU>\t.\tPASS\tAC=36;AF=0.00953642;AFR_AF=0.0319;AMR_AF=0.0057;AN=3775;CS=ALU_umary;EAS_AF=0.0013;EUR_AF=0;MEINFO=AluUndef,2,277,-;NS=2504;SAS_AF=0;SVLEN=275;SVTYPE=ALU;TSD=null\tGT\t0\nX\t22624887\tBI_GS_DEL1_B5_P2920_563\tA\t<CN0>\t100\tPASS\tAC=11;AF=0.00344371;AFR_AF=0.005;AMR_AF=0;AN=2542;CIEND=-17,17;CIPOS=-17,17;CS=DEL_union;EAS_AF=0;END=22630718;EUR_AF=0.0065;NS=2504;SAS_AF=0.0042;SVTYPE=DEL\tGT\t.\nX\t22698248\tYL_CN_STU_4559\tC\t<CN0>\t100\tPASS\tAC=9;AF=0.00238411;AFR_AF=0.002;AMR_AF=0.0019;AN=2542;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0;END=22921088;EUR_AF=0.0065;NS=2504;SAS_AF=0.0014;SVTYPE=DEL\tGT\t.\nX\t22735316\tDUP_gs.X_CNV_X_22735316_22747548\tT\t<CN0>,<CN2>\t.\tPASS\tAC=1,1;AF=0.0002649,0.0002649;AFR_AF=0,0;AMR_AF=0,0;AN=3775;CS=DUP_gs;EAS_AF=0,0;END=22747548;EUR_AF=0,0;NS=2504;SAS_AF=0.0014,0.0014;SVTYPE=CNV\tGT\t0\nX\t22768204\tL1_umary_LINE1_3020\tG\t<INS:ME:LINE1>\t.\tPASS\tAC=1;AF=0.0002649;AFR_AF=0;AMR_AF=0;AN=3775;CS=L1_umary;EAS_AF=0;EUR_AF=0;MEINFO=LINE1,2346,6005,+;NS=2504;SAS_AF=0.0014;SVLEN=3659;SVTYPE=LINE1;TSD=AGAAAGACAGGGCAGGGG\tGT\t0\nX\t22855548\tDEL_pindel_53300\tTGGGATATACTGATTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCAGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACCACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCATTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGG\tT\t.\tPASS\tAC=1276;AF=0.338013;AFR_AF=0.3829;AMR_AF=0.3282;AN=3775;CS=DEL_pindel;EAS_AF=0.3076;END=22855837;EUR_AF=0.3042;MEINFO=AluY,22,281,-;NS=2504;SAS_AF=0.351;SVTYPE=DEL_ALU\tGT\t1\nX\t22941250\tBI_GS_DEL1_B4_P2920_142\tG\t<CN0>\t100\tPASS\tAC=8;AF=0.00238411;AFR_AF=0.002;AMR_AF=0.0019;AN=2542;CIEND=-16,17;CIPOS=-16,17;CS=DEL_union;EAS_AF=0;END=22955053;EUR_AF=0.0065;MC=YL_CN_BEB_3668;NS=2504;SAS_AF=0.0014;SVTYPE=DEL\tGT\t.\nX\t22947646\tYL_CN_JPT_4679\tA\t<CN0>\t100\tPASS\tAC=10;AF=0.00291391;AFR_AF=0.002;AMR_AF=0.0019;AN=2542;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0.0039;END=22997060;EUR_AF=0.0065;MC=UW_VH_21642,BI_GS_DEL1_B4_P2920_145;NS=2504;SAS_AF=0;SVTYPE=DEL\tGT\t.\nX\t22960251\tALU_umary_ALU_12606\tT\t<INS:ME:ALU>\t.\tPASS\tAC=6;AF=0.0015894;AFR_AF=0.005;AMR_AF=0.0019;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0;MEINFO=AluUndef,4,278,+;NS=2504;SAS_AF=0;SVLEN=274;SVTYPE=ALU;TSD=null\tGT\t0\nX\t23030827\tYL_CN_PJL_5007\tG\t<CN0>\t100\tPASS\tAC=9;AF=0.00264901;AFR_AF=0.002;AMR_AF=0.0019;AN=2542;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0;END=23068702;EUR_AF=0.0078;MC=BI_GS_DEL1_B3_P2921_3;NS=2504;SAS_AF=0.0014;SVTYPE=DEL\tGT\t.\nX\t23076960\tUW_VH_20895\tT\t<CN0>\t100\tPASS\tAC=8;AF=0.00238411;AFR_AF=0.002;AMR_AF=0;AN=2542;CIEND=0,140;CIPOS=-157,0;CS=DEL_union;EAS_AF=0.0013;END=23082999;EUR_AF=0.0078;MC=YL_CN_CHB_4620,BI_GS_DEL1_B4_P2921_13;NS=2504;SAS_AF=0;SVTYPE=DEL\tGT\t.\nX\t23179256\tL1_umary_LINE1_3021\tT\t<INS:ME:LINE1>\t.\tPASS\tAC=1;AF=0.0002649;AFR_AF=0;AMR_AF=0;AN=3775;CS=L1_umary;EAS_AF=0;EUR_AF=0;MEINFO=LINE1,1477,5940,-;NS=2504;SAS_AF=0.0014;SVLEN=4463;SVTYPE=LINE1;TSD=null\tGT\t0\nX\t23202759\tBI_GS_DEL1_B2_P2921_101\tA\t<CN0>\t100\tPASS\tAC=8;AF=0.00211921;AFR_AF=0.003;AMR_AF=0;AN=2542;CIEND=-1,2;CIPOS=-1,2;CS=DEL_union;EAS_AF=0.0013;END=23227700;EUR_AF=0.0052;MC=UW_VH_11601,YL_CN_CDX_3802;NS=2504;SAS_AF=0;SVTYPE=DEL\tGT\t.\nX\t23384572\tUW_VH_12334\tT\t<CN0>\t100\tPASS\tAC=12;AF=0.0113907;AFR_AF=0.015;AMR_AF=0.0115;AN=2542;CIEND=0,153;CIPOS=-226,0;CS=DEL_union;EAS_AF=0.0079;END=23386277;EUR_AF=0.0091;NS=2504;SAS_AF=0.0125;SVTYPE=DEL\tGT\t.\nX\t23475469\tDUP_gs.X_CNV_X_23475469_23490638\tT\t<CN0>,<CN2>\t.\tPASS\tAC=0,2;AF=0,0.0005298;AFR_AF=0,0;AMR_AF=0,0;AN=3775;CS=DUP_gs;EAS_AF=0,0.0026;END=23490638;EUR_AF=0,0;NS=2504;SAS_AF=0,0;SVTYPE=DUP\tGT\t0\nX\t23600453\tL1_umary_LINE1_3022\tC\t<INS:ME:LINE1>\t.\tPASS\tAC=28;AF=0.00741722;AFR_AF=0.0259;AMR_AF=0.0038;AN=3775;CS=L1_umary;EAS_AF=0;EUR_AF=0;MEINFO=LINE1,4584,5972,+;NS=2504;SAS_AF=0;SVLEN=1388;SVTYPE=LINE1;TSD=GAAAAAGGCAACAGAC\tGT\t0\nX\t23672647\tUW_VH_17232\tA\t<CN0>\t100\tPASS\tAC=9;AF=0.00344371;AFR_AF=0.005;AMR_AF=0.0019;AN=2542;CIEND=0,93;CIPOS=-114,0;CS=DEL_union;EAS_AF=0.0026;END=23675179;EUR_AF=0.0039;NS=2504;SAS_AF=0.0028;SVTYPE=DEL\tGT\t.\nX\t23798222\tDEL_pindel_53309\tATATATACGTATATATACACACATATATATGTGTATATATATGTATATATATATACC\tA\t.\tPASS\tAC=975;AF=0.258278;AFR_AF=0.2682;AMR_AF=0.2405;AN=3775;CS=DEL_pindel;EAS_AF=0.212;END=23798278;EUR_AF=0.2781;NS=2504;SAS_AF=0.2855;SVTYPE=DEL\tGT\t1\nX\t23812115\tBI_GS_DEL1_B5_P2921_665\tC\t<CN0>\t100\tPASS\tAC=39;AF=0.0815894;AFR_AF=0.0668;AMR_AF=0.1126;AN=2542;CIEND=-12,12;CIPOS=-12,12;CS=DEL_union;EAS_AF=0.0746;END=23813045;EUR_AF=0.0796;NS=2504;SAS_AF=0.0891;SVTYPE=DEL\tGT\t.\nX\t23839396\tYL_CN_ITU_4640\tA\t<CN0>\t100\tPASS\tAC=6;AF=0.0018543;AFR_AF=0.002;AMR_AF=0;AN=2542;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0;END=23846879;EUR_AF=0.0039;NS=2504;SAS_AF=0.0028;SVTYPE=DEL\tGT\t.\nX\t23849563\tDUP_gs.X_CNV_X_23849563_23864095\tC\t<CN0>,<CN2>\t.\tPASS\tAC=0,3;AF=0,0.0007947;AFR_AF=0,0;AMR_AF=0,0.0038;AN=3775;CS=DUP_gs;EAS_AF=0,0;END=23864095;EUR_AF=0,0.0013;NS=2504;SAS_AF=0,0;SVTYPE=DUP\tGT\t0\nX\t23899994\tDUP_gs.X_CNV_X_23899994_23906285\tG\t<CN0>,<CN2>\t.\tPASS\tAC=0,1;AF=0,0.0002649;AFR_AF=0,0.001;AMR_AF=0,0;AN=3775;CS=DUP_gs;EAS_AF=0,0;END=23906285;EUR_AF=0,0;NS=2504;SAS_AF=0,0;SVTYPE=DUP\tGT\t0\nX\t24015943\tBI_GS_DEL1_B2_P2922_6\tC\t<CN0>\t100\tPASS\tAC=15;AF=0.0108609;AFR_AF=0.012;AMR_AF=0.0019;AN=2542;CIEND=-2,3;CIPOS=-2,3;CS=DEL_union;EAS_AF=0.0236;END=24022659;EUR_AF=0.0052;MC=UW_VH_11481,YL_CN_CDX_3803;NS=2504;SAS_AF=0.0084;SVTYPE=DEL\tGT\t.\nX\t24087236\tDEL_pindel_53315\tTGCCTGTGATCCCAGCAATTTGGGAGGCTGAGGTGGGTGGATCGCTTGAGCTCAGGAGTTTGAGACCA\tT\t.\tPASS\tAC=873;AF=0.231258;AFR_AF=0.1934;AMR_AF=0.2538;AN=3775;CS=DEL_pindel;EAS_AF=0.2513;END=24087303;EUR_AF=0.2232;NS=2504;SAS_AF=0.2549;SVTYPE=DEL\tGT\t1\nX\t24103576\tSVA_umary_SVA_834\tT\t<INS:ME:SVA>\t.\tPASS\tAC=4;AF=0.0010596;AFR_AF=0.004;AMR_AF=0;AN=3775;CS=SVA_umary;EAS_AF=0;EUR_AF=0;MEINFO=SVA,32,1620,+;NS=2504;SAS_AF=0;SVLEN=1588;SVTYPE=SVA;TSD=null\tGT\t0\nX\t24110987\tYL_CN_PUR_5625\tC\t<CN0>\t100\tPASS\tAC=37;AF=0.0129801;AFR_AF=0.004;AMR_AF=0.0057;AN=2542;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0.0013;END=24116767;EUR_AF=0.0522;MC=UW_VH_2146,BI_GS_DEL1_B2_P2922_36;NS=2504;SAS_AF=0.0014;SVTYPE=DEL\tGT\t.\nX\t24184274\tUW_VH_22501\tA\t<CN0>\t100\tPASS\tAC=89;AF=0.13298;AFR_AF=0.1196;AMR_AF=0.1164;AN=2542;CIEND=0,24;CIPOS=-29,0;CS=DEL_union;EAS_AF=0.1204;END=24185041;EUR_AF=0.1345;MC=BI_GS_DEL1_B5_P2922_103;NS=2504;SAS_AF=0.1755;SVTYPE=DEL\tGT\t.\nX\t24254806\tUW_VH_5951\tC\t<CN0>\t100\tPASS\tAC=12;AF=0.0174834;AFR_AF=0.015;AMR_AF=0.0191;AN=2542;CIEND=0,129;CIPOS=-123,0;CS=DEL_union;EAS_AF=0.0262;END=24256768;EUR_AF=0.0183;MC=BI_GS_DEL1_B1_P2922_118;NS=2504;SAS_AF=0.0097;SVTYPE=DEL\tGT\t.\nX\t24259047\tYL_CN_GIH_3399\tT\t<CN0>\t100\tPASS\tAC=7;AF=0.00211921;AFR_AF=0.002;AMR_AF=0.0019;AN=2542;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0;END=24276594;EUR_AF=0.0052;MC=BI_GS_DEL1_B5_P2922_155;NS=2504;SAS_AF=0.0014;SVTYPE=DEL\tGT\t.\nX\t24292700\tDEL_pindel_53321\tTAAGATGTAAAATTCAGGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTGGTAGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCGCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAGAAAAGAAAAAAAAAAAAA\tT\t.\tPASS\tAC=2295;AF=0.607947;AFR_AF=0.6241;AMR_AF=0.6431;AN=3775;CS=DEL_pindel;EAS_AF=0.5995;END=24293032;EUR_AF=0.6345;MEINFO=AluYc1,1,281,+;NS=2504;SAS_AF=0.5404;SVTYPE=DEL_ALU\tGT\t1\nX\t24302880\tBI_GS_DEL1_B5_P2922_200\tC\t<CN0>\t100\tPASS\tAC=26;AF=0.0603973;AFR_AF=0.0518;AMR_AF=0.0802;AN=2542;CIEND=-19,19;CIPOS=-19,19;CS=DEL_union;EAS_AF=0.0432;END=24304158;EUR_AF=0.0705;NS=2504;SAS_AF=0.0655;SVTYPE=DEL\tGT\t.\nX\t24539415\tUW_VH_25339\tA\t<CN0>\t100\tPASS\tAC=10;AF=0.0262252;AFR_AF=0.0279;AMR_AF=0.0248;AN=2542;CIEND=0,241;CIPOS=-275,0;CS=DEL_union;EAS_AF=0.0249;END=24540978;EUR_AF=0.0261;NS=2504;SAS_AF=0.0265;SVTYPE=DEL\tGT\t.\nX\t24736870\tBI_GS_DEL1_B4_P2922_81\tA\t<CN0>\t100\tPASS\tAC=15;AF=0.0439735;AFR_AF=0.0369;AMR_AF=0.0592;AN=2542;CIEND=-13,14;CIPOS=-13,14;CS=DEL_union;EAS_AF=0.0432;END=24738017;EUR_AF=0.0522;NS=2504;SAS_AF=0.0348;SVTYPE=DEL\tGT\t.\nX\t24756029\tDEL_pindel_53332\tTAAAAGCCTCTGGTAGTTTTGGCCGGGCGCGGTGGCTCAAGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCATGAGGTCAGGAGATCGGGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGCGGTGGCGGGCGCCTGTAGTCCCAGCTACTGGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCCGGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAA\tT\t.\tPASS\tAC=1367;AF=0.362119;AFR_AF=0.4576;AMR_AF=0.3435;AN=3775;CS=DEL_pindel;EAS_AF=0.2932;END=24756359;EUR_AF=0.3159;MEINFO=AluYb6_2,1,281,+;NS=2504;SAS_AF=0.3649;SVTYPE=DEL_ALU\tGT\t1\nX\t24842821\tALU_umary_ALU_12607\tA\t<INS:ME:ALU>\t.\tPASS\tAC=15;AF=0.00397351;AFR_AF=0.003;AMR_AF=0.0076;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0.0091;MEINFO=AluUndef,3,281,-;NS=2504;SAS_AF=0.0014;SVLEN=278;SVTYPE=ALU;TSD=null\tGT\t0\nX\t24877203\tUW_VH_5249\tT\t<CN0>\t100\tPASS\tAC=17;AF=0.034702;AFR_AF=0.0299;AMR_AF=0.0573;AN=2542;CIEND=0,167;CIPOS=-233,0;CS=DEL_union;EAS_AF=0.0236;END=24878541;EUR_AF=0.0352;MC=BI_GS_DEL1_B1_P2922_548;NS=2504;SAS_AF=0.0362;SVTYPE=DEL\tGT\t.\nX\t25159302\tALU_umary_ALU_12608\tT\t<INS:ME:ALU>\t.\tPASS\tAC=75;AF=0.0198676;AFR_AF=0.0688;AMR_AF=0.0095;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0.0013;MEINFO=AluUndef,1,281,-;NS=2504;SAS_AF=0;SVLEN=280;SVTYPE=ALU;TSD=null\tGT\t0\nX\t25317339\tDEL_pindel_53335\tTGATATAATGGGGGAACAAGACGGGCATGGGGCCTACCCTCTTAAATCTAAACTCTATGATGTATACAGTCAAGATAGCAATTAGAATATAGTGTGAAAGGCGAGTACAAGGATAAGGTGCTATGGCCACGTGTGAGGGGGCACTTAACTCAGAAGTAGAATGAAGGATGGACTGAGGGAGCAAACAAAGGGTCACATATTGCATGATTCCAAGTATATGAAATATCCTGTATAGGTAATTTCATAGAGACAGAAAGATTAGTTGGTTGTCGGGATCTGGGGATAATGAGGAGTAACTGCTTAATGAGCACAGGGTTTCTTTAGAAGTGATGAAAATGTTCTGGAACTAGATAATTGTGATACTTGCAGAGCATTGTGAGTGTACTAAAAGCCACTGAATTGTATACTTTAAAATGGATAATTTTATGTCATGTAAATTTTACCTCAATAGAAAAAATAAAATAGAAGAGTGAGCAGTTAGAAGACTACTACCATGATAGTCCTGATGTGAGATACATTTTAAAAGTATTTATTTTAAAAGTATTATATTTATGTAGTTTTTGAATAGGCATGCACATGGCACAAGCTTCAAAAAGAACAAAAGGTTTAAAGTAAAATGTAAGTGTCCTTCCCTTCCTATCTGCCAGTCATCTAGTTCTCTTCCCTTGGAGGAAAACATAGTTATCAGATTCTTATGTATTTTGAGTCTATGCATAATGTTTATGTATTTGTGTGTTTATATATAAATATAAATATATCTCTTGTGTATATATTCATATATGTGTGTATTCAAATATATATTATTTTAAAATCAACTTGTAGTTTATGGGGTTTAGGATATGCCACCTCATAATATGGCACCCTGGCATTTGAGAAAACAGCA\tT\t.\tPASS\tAC=373;AF=0.098808;AFR_AF=0.0688;AMR_AF=0.1145;AN=3775;CS=DEL_pindel;EAS_AF=0.123;END=25318221;EUR_AF=0.0979;NS=2504;SAS_AF=0.1045;SVTYPE=DEL\tGT\t0\nX\t25333375\tYL_CN_STU_4561\tG\t<CN0>\t100\tPASS\tAC=23;AF=0.047947;AFR_AF=0.0439;AMR_AF=0.0477;AN=2542;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0.0445;END=25336819;EUR_AF=0.0601;NS=2504;SAS_AF=0.0446;SVTYPE=DEL\tGT\t.\nX\t25380271\tBI_GS_DEL1_B5_P2923_306\tA\t<CN0>\t100\tPASS\tAC=11;AF=0.00291391;AFR_AF=0.003;AMR_AF=0.0019;AN=2542;CIEND=-17,17;CIPOS=-17,17;CS=DEL_union;EAS_AF=0;END=25393090;EUR_AF=0.0065;MC=YL_CN_GIH_3400;NS=2504;SAS_AF=0.0028;SVTYPE=DEL\tGT\t.\nX\t25614920\tUW_VH_5408\tG\t<CN0>\t100\tPASS\tAC=11;AF=0.0172185;AFR_AF=0.016;AMR_AF=0.0153;AN=2542;CIEND=0,247;CIPOS=-228,0;CS=DEL_union;EAS_AF=0.0144;END=25616937;EUR_AF=0.0274;MC=BI_GS_DEL1_B1_P2923_407;NS=2504;SAS_AF=0.0125;SVTYPE=DEL\tGT\t.\nX\t25621786\tBI_GS_DEL1_B2_P2923_304\tT\t<CN0>\t100\tPASS\tAC=16;AF=0.042649;AFR_AF=0.0389;AMR_AF=0.042;AN=2542;CIEND=-15,16;CIPOS=-15,16;CS=DEL_union;EAS_AF=0.0432;END=25623133;EUR_AF=0.0444;NS=2504;SAS_AF=0.046;SVTYPE=DEL\tGT\t.\nX\t25658706\tDEL_pindel_53336\tAATGGGGATGGGATTCAAACAAGCTATTTATATTTGCCCTCCTAATTGTTCAAAAACAATTTCAAATAAACAAAGGGGACATGTTTAAAATCTGGAAATAAAATTCTAAGTGTTTAAAAAAACAAGTTGAAAGCAGGAATAAAGGAAGAATGCAGACTACTAAGGATATGAATTCATTCTCAACAATGATAGAAAAGGTTAAAATACCTGTTCCTTCTAATCTCATTCTTTCTCTTACTCCCTGCCCTCATGCAACCGTGGCCT\tA\t.\tPASS\tAC=568;AF=0.150464;AFR_AF=0.1157;AMR_AF=0.1183;AN=3775;CS=DEL_pindel;EAS_AF=0.1924;END=25658969;EUR_AF=0.1514;NS=2504;SAS_AF=0.1769;SVTYPE=DEL\tGT\t1\nX\t25743848\tDEL_pindel_53338\tTAGTTACTTCACCTGTATCTGAATTAAGGGGCACCCCAAACCCAGTAATGCTGTAATTCTTGA\tT\t.\tPASS\tAC=237;AF=0.0627815;AFR_AF=0.0289;AMR_AF=0.0744;AN=3775;CS=DEL_pindel;EAS_AF=0.0746;END=25743910;EUR_AF=0.0875;NS=2504;SAS_AF=0.0627;SVTYPE=DEL\tGT\t1\nX\t25781546\tBI_GS_DEL1_B2_P2923_384\tC\t<CN0>\t100\tPASS\tAC=5;AF=0.0015894;AFR_AF=0.002;AMR_AF=0.0019;AN=2542;CIEND=-30,30;CIPOS=-30,30;CS=DEL_union;EAS_AF=0;END=25785920;EUR_AF=0.0039;MC=YL_CN_PEL_4318;NS=2504;SAS_AF=0;SVTYPE=DEL\tGT\t.\nX\t25845880\tDEL_pindel_53341\tTCTTTAAAAGATAGCCACCTAAAGTCAAAAGTTAAATGGCAACTGTCATATGACATTGTACAGTTTTGTTGAAATTATTTAGGCAAA\tT\t.\tPASS\tAC=645;AF=0.170861;AFR_AF=0.1176;AMR_AF=0.1794;AN=3775;CS=DEL_pindel;EAS_AF=0.2173;END=25845966;EUR_AF=0.1723;NS=2504;SAS_AF=0.188;SVTYPE=DEL\tGT\t1\nX\t25889622\tL1_umary_LINE1_3023\tA\t<INS:ME:LINE1>\t.\tPASS\tAC=3;AF=0.0007947;AFR_AF=0.003;AMR_AF=0;AN=3775;CS=L1_umary;EAS_AF=0;EUR_AF=0;MEINFO=LINE1,4026,5956,+;NS=2504;SAS_AF=0;SVLEN=1930;SVTYPE=LINE1;TSD=null\tGT\t0\nX\t25903910\tALU_umary_ALU_12609\tT\t<INS:ME:ALU>\t.\tPASS\tAC=278;AF=0.0736424;AFR_AF=0.1565;AMR_AF=0.0802;AN=3775;CS=ALU_umary;EAS_AF=0.0537;EUR_AF=0.0379;MEINFO=AluUndef,78,281,+;NS=2504;SAS_AF=0.0125;SVLEN=203;SVTYPE=ALU;TSD=null\tGT\t1\nX\t25947939\tDEL_pindel_53345\tTTCAAGTCATATTCTATTTTATTTTATTTTATTTTATTTTATTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCCGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTTCTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC\tT\t.\tPASS\tAC=1503;AF=0.398146;AFR_AF=0.4427;AMR_AF=0.3855;AN=3775;CS=DEL_pindel;EAS_AF=0.3901;END=25948273;EUR_AF=0.3668;MEINFO=AluYb6_2,1,281,-;NS=2504;SAS_AF=0.3872;SVTYPE=DEL_ALU\tGT\t1\nX\t25978463\tALU_umary_ALU_12610\tG\t<INS:ME:ALU>\t.\tPASS\tAC=164;AF=0.0434437;AFR_AF=0.1266;AMR_AF=0.0229;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0.0313;MEINFO=AluYb8,2,280,+;NS=2504;SAS_AF=0.0014;SVLEN=278;SVTYPE=ALU;TSD=AAATTTATTCCTAGG\tGT\t0\nX\t26001405\tBI_GS_DEL1_B4_P2924_1\tA\t<CN0>\t100\tPASS\tAC=5;AF=0.00980132;AFR_AF=0.005;AMR_AF=0.0115;AN=2542;CIEND=-18,19;CIPOS=-18,19;CS=DEL_union;EAS_AF=0.0065;END=26003820;EUR_AF=0.0248;NS=2504;SAS_AF=0.0028;SVTYPE=DEL\tGT\t.\nX\t26167454\tALU_umary_ALU_12611\tC\t<INS:ME:ALU>\t.\tPASS\tAC=14;AF=0.00370861;AFR_AF=0;AMR_AF=0;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0;MEINFO=AluYb8,1,277,+;NS=2504;SAS_AF=0.0195;SVLEN=276;SVTYPE=ALU;TSD=AAAAATACCTCTCCAC\tGT\t0\nX\t26182841\tDUP_gs.X_CNV_X_26182841_26213475\tA\t<CN0>,<CN2>\t.\tPASS\tAC=2,2;AF=0.0005298,0.0005298;AFR_AF=0.002,0.002;AMR_AF=0,0;AN=3775;CS=DUP_gs;EAS_AF=0,0;END=26213475;EUR_AF=0,0;NS=2504;SAS_AF=0,0;SVTYPE=CNV\tGT\t0\nX\t26363143\tBI_GS_DEL1_B5_P2924_276\tA\t<CN0>\t100\tPASS\tAC=31;AF=0.0116556;AFR_AF=0.0319;AMR_AF=0.0076;AN=2542;CIEND=-2,2;CIPOS=-2,2;CS=DEL_union;EAS_AF=0.0026;END=26366293;EUR_AF=0.0065;MC=YL_CN_ESN_4384,UW_VH_7992;NS=2504;SAS_AF=0.0014;SVTYPE=DEL\tGT\t.\nX\t26415770\tALU_umary_ALU_12612\tC\t<INS:ME:ALU>\t.\tPASS\tAC=31;AF=0.00821192;AFR_AF=0;AMR_AF=0.0382;AN=3775;CS=ALU_umary;EAS_AF=0.0144;EUR_AF=0;MEINFO=AluUndef,3,281,-;NS=2504;SAS_AF=0;SVLEN=278;SVTYPE=ALU;TSD=null\tGT\t0\nX\t26481460\tALU_umary_ALU_12613\tT\t<INS:ME:ALU>\t.\tPASS\tAC=18;AF=0.00476821;AFR_AF=0;AMR_AF=0.0095;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0.0131;MEINFO=AluUndef,1,281,-;NS=2504;SAS_AF=0.0042;SVLEN=280;SVTYPE=ALU;TSD=null\tGT\t0\nX\t26662515\tDEL_pindel_53354\tAATAGATGTCCATATCCTTATCCCCTGAACCTGTAAGTATTTAAGATTACAGAATAAAGAAGAATTAAGGCTTCCGATTGAATTAAGATCAACAATTAGTTTACCTTAACATGGGAAGAACAACTCACATCATCCAGGTGGGTTTAATGTAATCACAATGGTCCTTATAAGTATAAAGGGAGGCGGAAAAGAAAGCGAGTAAGAAGAGATGTGATGTTGGAATTAGAAGGTAGAGTG\tA\t.\tPASS\tAC=1034;AF=0.273907;AFR_AF=0.2732;AMR_AF=0.2805;AN=3775;CS=DEL_pindel;EAS_AF=0.2762;END=26662751;EUR_AF=0.252;NS=2504;SAS_AF=0.2911;SVTYPE=DEL\tGT\t1\nX\t26662877\tBI_GS_DEL1_B2_P2924_316\tT\t<CN0>\t100\tPASS\tAC=7;AF=0.0121854;AFR_AF=0.014;AMR_AF=0.0057;AN=2542;CIEND=-1,2;CIPOS=-1,2;CS=DEL_union;EAS_AF=0.0118;END=26664888;EUR_AF=0.0196;NS=2504;SAS_AF=0.007;SVTYPE=DEL\tGT\t.\nX\t26732761\tBI_GS_DEL1_B3_P2924_25\tC\t<CN0>\t100\tPASS\tAC=5;AF=0.00211921;AFR_AF=0.004;AMR_AF=0.0019;AN=2542;CIEND=-51,52;CIPOS=-51,52;CS=DEL_union;EAS_AF=0;END=26737387;EUR_AF=0.0039;MC=YL_CN_ESN_4385;NS=2504;SAS_AF=0;SVTYPE=DEL\tGT\t.\nX\t26810528\tDUP_gs.X_CNV_X_26810528_26821593\tT\t<CN0>,<CN2>\t.\tPASS\tAC=0,20;AF=0,0.00529801;AFR_AF=0,0.001;AMR_AF=0,0.0076;AN=3775;CS=DUP_gs;EAS_AF=0,0;END=26821593;EUR_AF=0,0.0196;NS=2504;SAS_AF=0,0;SVTYPE=DUP\tGT\t0\nX\t26922374\tSVA_umary_SVA_835\tA\t<INS:ME:SVA>\t.\tPASS\tAC=445;AF=0.117881;AFR_AF=0.0259;AMR_AF=0.0802;AN=3775;CS=SVA_umary;EAS_AF=0.1636;EUR_AF=0.1697;MEINFO=SVA,39,1627,+;NS=2504;SAS_AF=0.1699;SVLEN=1588;SVTYPE=SVA;TSD=AAGCATTCTCTA\tGT\t0\nX\t26941756\tALU_umary_ALU_12614\tT\t<INS:ME:ALU>\t.\tPASS\tAC=2;AF=0.0005298;AFR_AF=0;AMR_AF=0;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0;MEINFO=AluYa4_5,1,281,+;NS=2504;SAS_AF=0.0028;SVLEN=280;SVTYPE=ALU;TSD=null\tGT\t0\nX\t26974000\tYL_CN_ITU_4643\tA\t<CN0>\t100\tPASS\tAC=6;AF=0.0018543;AFR_AF=0.003;AMR_AF=0;AN=2542;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0;END=27038949;EUR_AF=0.0039;MC=BI_GS_DEL1_B3_P2924_31;NS=2504;SAS_AF=0.0014;SVTYPE=DEL\tGT\t.\nX\t27031915\tDEL_pindel_53360\tCAATAGGTTGTTTTTCAGCCCATTCACCTCCCTCCTTCTCCTATCTAGTAGTCCTTAGTTTCTATTGCTCCCATCTTTAAGTCCACATGTACTCAATGTTTACCTTCCATTTATATATCAGAACATATAGCATTTAATTTTCTGTTCCTGAGTTAATTTTCTTAAGATAATGGCCTCCAGTTGCCTCCATGTTGCTGCAAAATAGATTATTTCATTCTTTGTATGGCTACACAGTATTTCATGGTGTATATGTACTACATTTTTAAAATCCAGTCCACCATTGTTGGGTCCCTATATTGTTTCTGCGTCTTTGCTATTGTG\tC\t.\tPASS\tAC=251;AF=0.0664901;AFR_AF=0.0558;AMR_AF=0.0668;AN=3775;CS=DEL_pindel;EAS_AF=0.1139;END=27032235;EUR_AF=0.0431;NS=2504;SAS_AF=0.0557;SVTYPE=DEL\tGT\t1\nX\t27037894\tBI_GS_DEL1_B5_P2925_29\tT\t<CN0>\t100\tPASS\tAC=178;AF=0.229934;AFR_AF=0.2552;AMR_AF=0.2309;AN=2542;CIEND=-17,17;CIPOS=-17,17;CS=DEL_union;EAS_AF=0.2304;END=27038845;EUR_AF=0.205;NS=2504;SAS_AF=0.2201;SVTYPE=DEL\tGT\t.\nX\t27078143\tBI_GS_DEL1_B4_P2925_8\tT\t<CN0>\t100\tPASS\tAC=30;AF=0.0113907;AFR_AF=0.002;AMR_AF=0;AN=2542;CIEND=0,1;CIPOS=0,1;CS=DEL_union;EAS_AF=0.0013;END=27081780;EUR_AF=0.0065;MC=YL_CN_ITU_4644;NS=2504;SAS_AF=0.0487;SVTYPE=DEL\tGT\t.\nX\t27093160\tUW_VH_20745\tT\t<CN0>\t100\tPASS\tAC=8;AF=0.00211921;AFR_AF=0.002;AMR_AF=0.0019;AN=2542;CIEND=0,126;CIPOS=-191,0;CS=DEL_union;EAS_AF=0.0013;END=27098209;EUR_AF=0.0052;MC=BI_GS_DEL1_B4_P2925_12;NS=2504;SAS_AF=0;SVTYPE=DEL\tGT\t.\nX\t27262924\tBI_GS_DEL1_B4_P2925_32\tT\t<CN0>\t100\tPASS\tAC=13;AF=0.0323179;AFR_AF=0.0279;AMR_AF=0.0248;AN=2542;CIEND=-41,41;CIPOS=-41,41;CS=DEL_union;EAS_AF=0.0288;END=27264660;EUR_AF=0.0457;NS=2504;SAS_AF=0.0334;SVTYPE=DEL\tGT\t.\nX\t27438780\tBI_GS_DEL1_B4_P2925_56\tA\t<CN0>\t100\tPASS\tAC=9;AF=0.00264901;AFR_AF=0.003;AMR_AF=0.0019;AN=2542;CIEND=-3,4;CIPOS=-3,4;CS=DEL_union;EAS_AF=0.0026;END=27445808;EUR_AF=0.0052;MC=YL_CN_JPT_4682;NS=2504;SAS_AF=0;SVTYPE=DEL\tGT\t.\nX\t27501908\tALU_umary_ALU_12615\tA\t<INS:ME:ALU>\t.\tPASS\tAC=2;AF=0.0005298;AFR_AF=0.002;AMR_AF=0;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0;MEINFO=AluUndef,55,187,+;NS=2504;SAS_AF=0;SVLEN=132;SVTYPE=ALU;TSD=null\tGT\t0\nX\t27556908\tUW_VH_19494\tA\t<CN0>\t100\tPASS\tAC=6;AF=0.0015894;AFR_AF=0.002;AMR_AF=0;AN=2542;CIEND=0,279;CIPOS=-282,0;CS=DEL_union;EAS_AF=0;END=27565422;EUR_AF=0.0039;MC=YL_CN_ITU_4645;NS=2504;SAS_AF=0.0014;SVTYPE=DEL\tGT\t.\nX\t27709402\tL1_umary_LINE1_3024\tT\t<INS:ME:LINE1>\t.\tPASS\tAC=1;AF=0.0002649;AFR_AF=0;AMR_AF=0;AN=3775;CS=L1_umary;EAS_AF=0.0013;EUR_AF=0;MEINFO=LINE1,3983,4297,+;NS=2504;SAS_AF=0;SVLEN=314;SVTYPE=LINE1;TSD=null\tGT\t0\nX\t27714737\tBI_GS_DEL1_B1_P2925_386\tT\t<CN0>\t100\tPASS\tAC=119;AF=0.150464;AFR_AF=0.1944;AMR_AF=0.1183;AN=2542;CIEND=-15,16;CIPOS=-15,16;CS=DEL_union;EAS_AF=0.1387;END=27716219;EUR_AF=0.1084;MC=UW_VH_10200;NS=2504;SAS_AF=0.1699;SVTYPE=DEL\tGT\t.\nX\t27805772\tALU_umary_ALU_12616\tA\t<INS:ME:ALU>\t.\tPASS\tAC=4;AF=0.0010596;AFR_AF=0.004;AMR_AF=0;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0;MEINFO=AluUndef,3,281,+;NS=2504;SAS_AF=0;SVLEN=278;SVTYPE=ALU;TSD=null\tGT\t0\nX\t27818932\tBI_GS_DEL1_B3_P2925_24\tC\t<CN0>\t100\tPASS\tAC=48;AF=0.0913907;AFR_AF=0.0828;AMR_AF=0.0935;AN=2542;CIEND=-9,9;CIPOS=-9,9;CS=DEL_union;EAS_AF=0.0838;END=27820534;EUR_AF=0.1188;NS=2504;SAS_AF=0.0808;SVTYPE=DEL\tGT\t.\nX\t27831386\tALU_umary_ALU_12617\tA\t<INS:ME:ALU>\t.\tPASS\tAC=17;AF=0.00450331;AFR_AF=0.016;AMR_AF=0.0019;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0;MEINFO=AluYa4_5,3,281,+;NS=2504;SAS_AF=0;SVLEN=278;SVTYPE=ALU;TSD=null\tGT\t0\nX\t27846265\tL1_umary_LINE1_3025\tT\t<INS:ME:LINE1>\t.\tPASS\tAC=3;AF=0.0007947;AFR_AF=0;AMR_AF=0;AN=3775;CS=L1_umary;EAS_AF=0.0039;EUR_AF=0;MEINFO=LINE1,50,5983,-;NS=2504;SAS_AF=0;SVLEN=5933;SVTYPE=LINE1;TSD=null\tGT\t0\nX\t27901141\tYL_CN_CHB_4623\tA\t<CN0>\t100\tPASS\tAC=9;AF=0.00238411;AFR_AF=0.003;AMR_AF=0.0019;AN=2542;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0.0013;END=27908024;EUR_AF=0.0052;NS=2504;SAS_AF=0;SVTYPE=DEL\tGT\t.\nX\t27921604\tBI_GS_DEL1_B3_P2925_28\tT\t<CN0>\t100\tPASS\tAC=10;AF=0.0108609;AFR_AF=0.015;AMR_AF=0.0095;AN=2542;CIEND=-14,15;CIPOS=-14,15;CS=DEL_union;EAS_AF=0.0065;END=27923920;EUR_AF=0.0117;NS=2504;SAS_AF=0.0097;SVTYPE=DEL\tGT\t.\nX\t27965086\tUW_VH_18709\tT\t<CN0>\t100\tPASS\tAC=7;AF=0.00211921;AFR_AF=0.002;AMR_AF=0;AN=2542;CIEND=0,129;CIPOS=-96,0;CS=DEL_union;EAS_AF=0;END=27978103;EUR_AF=0.0052;MC=YL_CN_STU_4563;NS=2504;SAS_AF=0.0028;SVTYPE=DEL\tGT\t.\nX\t28179426\tDUP_gs.X_CNV_X_28179426_28274555\tT\t<CN0>,<CN2>\t.\tPASS\tAC=0,2;AF=0,0.0005298;AFR_AF=0,0;AMR_AF=0,0;AN=3775;CS=DUP_gs;EAS_AF=0,0;END=28274555;EUR_AF=0,0;NS=2504;SAS_AF=0,0.0028;SVTYPE=DUP\tGT\t0\nX\t28201364\tDUP_gs.X_CNV_X_28201364_28308110\tT\t<CN0>,<CN2>\t.\tPASS\tAC=0,6;AF=0,0.0015894;AFR_AF=0,0;AMR_AF=0,0;AN=3775;CS=DUP_gs;EAS_AF=0,0.0052;END=28308110;EUR_AF=0,0;NS=2504;SAS_AF=0,0.0028;SVTYPE=DUP\tGT\t0\nX\t28219334\tUW_VH_7937\tC\t<CN0>\t100\tPASS\tAC=7;AF=0.0174834;AFR_AF=0.014;AMR_AF=0.0172;AN=2542;CIEND=0,56;CIPOS=-41,0;CS=DEL_union;EAS_AF=0.0157;END=28221818;EUR_AF=0.0339;MC=BI_GS_DEL1_B1_P2926_120,YL_CN_PUR_5626;NS=2504;SAS_AF=0.007;SVTYPE=DEL\tGT\t.\nX\t28299044\tUW_VH_4589\tG\t<CN0>\t100\tPASS\tAC=62;AF=0.103311;AFR_AF=0.0937;AMR_AF=0.0878;AN=2542;CIEND=0,86;CIPOS=-63,0;CS=DEL_union;EAS_AF=0.1414;END=28300619;EUR_AF=0.1097;MC=BI_GS_DEL1_B1_P2926_163;NS=2504;SAS_AF=0.0808;SVTYPE=DEL\tGT\t.\nX\t28340101\tALU_umary_ALU_12618\tG\t<INS:ME:ALU>\t.\tPASS\tAC=1;AF=0.0002649;AFR_AF=0;AMR_AF=0.0019;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0;MEINFO=AluUndef,3,270,+;NS=2504;SAS_AF=0;SVLEN=267;SVTYPE=ALU;TSD=null\tGT\t0\nX\t28446509\tALU_umary_ALU_12620\tT\t<INS:ME:ALU>\t.\tPASS\tAC=23;AF=0.00609272;AFR_AF=0;AMR_AF=0.0057;AN=3775;CS=ALU_umary;EAS_AF=0.0013;EUR_AF=0.0209;MEINFO=AluUndef,1,280,-;NS=2504;SAS_AF=0.0042;SVLEN=279;SVTYPE=ALU;TSD=TCAGCTTTCTT\tGT\t0\nX\t28520775\tUW_VH_21913\tG\t<CN0>\t100\tPASS\tAC=9;AF=0.00344371;AFR_AF=0.003;AMR_AF=0.0019;AN=2542;CIEND=0,220;CIPOS=-186,0;CS=DEL_union;EAS_AF=0.0052;END=28526025;EUR_AF=0.0065;MC=YL_CN_JPT_4685,BI_GS_DEL1_B5_P2926_371;NS=2504;SAS_AF=0;SVTYPE=DEL\tGT\t.\nX\t28684443\tYL_CN_KHV_4977\tA\t<CN0>\t100\tPASS\tAC=7;AF=0.00211921;AFR_AF=0.002;AMR_AF=0;AN=2542;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0.0013;END=28688832;EUR_AF=0.0052;NS=2504;SAS_AF=0.0014;SVTYPE=DEL\tGT\t.\nX\t28697847\tUW_VH_14127\tT\t<CN0>\t100\tPASS\tAC=119;AF=0.181457;AFR_AF=0.1884;AMR_AF=0.1851;AN=2542;CIEND=0,253;CIPOS=-399,0;CS=DEL_union;EAS_AF=0.1649;END=28698607;EUR_AF=0.201;MC=BI_GS_DEL1_B5_P2926_521;NS=2504;SAS_AF=0.1657;SVTYPE=DEL\tGT\t.\nX\t28870137\tUW_VH_19749\tG\t<CN0>\t100\tPASS\tAC=7;AF=0.0018543;AFR_AF=0.002;AMR_AF=0;AN=2542;CIEND=0,228;CIPOS=-295,0;CS=DEL_union;EAS_AF=0;END=28876943;EUR_AF=0.0065;MC=YL_CN_CEU_5401,BI_GS_DEL1_B4_P2926_127;NS=2504;SAS_AF=0;SVTYPE=DEL\tGT\t.\nX\t28978946\tDEL_pindel_53375\tAAACCCCGTCTCTACTAAAAAAATACAAAAAATTAGCCAGGCGTGGTGGCGGGCGCC\tA\t.\tPASS\tAC=1039;AF=0.275232;AFR_AF=0.2672;AMR_AF=0.2615;AN=3775;CS=DEL_pindel;EAS_AF=0.2775;END=28979002;EUR_AF=0.2533;NS=2504;SAS_AF=0.3175;SVTYPE=DEL\tGT\t1\nX\t29002940\tUW_VH_6883\tT\t<CN0>\t100\tPASS\tAC=8;AF=0.00291391;AFR_AF=0.002;AMR_AF=0.0019;AN=2542;CIEND=0,230;CIPOS=-228,0;CS=DEL_union;EAS_AF=0.0013;END=29009590;EUR_AF=0.0091;MC=BI_GS_DEL1_B1_P2927_3;NS=2504;SAS_AF=0;SVTYPE=DEL\tGT\t.\nX\t29033920\tDEL_pindel_53376\tTGTCTAAAGAAAGTCATTGAAATAACAGGACATTCTGAAGTTTGTACTTTTACAATTCCTTAACTTTATACATGCTTAATTAAAAGTTAATAAATATTTACCAAAC\tT\t.\tPASS\tAC=1103;AF=0.292185;AFR_AF=0.2772;AMR_AF=0.2824;AN=3775;CS=DEL_pindel;EAS_AF=0.2997;END=29034025;EUR_AF=0.2846;NS=2504;SAS_AF=0.3203;SVTYPE=DEL\tGT\t1\nX\t29062877\tALU_umary_ALU_12621\tA\t<INS:ME:ALU>\t.\tPASS\tAC=11;AF=0.00291391;AFR_AF=0.011;AMR_AF=0;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0;MEINFO=AluUndef,3,271,+;NS=2504;SAS_AF=0;SVLEN=268;SVTYPE=ALU;TSD=null\tGT\t0\nX\t29073909\tDEL_pindel_53377\tGTGTATAGCTTATAAGTCATTATGCTATTAGATTGACTTTTTAACTTACGAGAAATTGGCATTCTAATTTAGATGCATGTATATGACTTCCCATGTCTATTTTAGGATAGATTTAATCATAAAATGATTTACCTTGGGCAAATTACAATAAACTCACTTGAGTAATTAATCGAGGTGTTTCAAGGAGTTAATTTAGTTCACGTAAATAAGAACGTTGTTTCAAGGAATCATTTACCACTCTGTATTGCCATTTGGCCTAGACTTTTTCCATTTTACATCCAGAAGACAAACTGTTGATAAACTATTTGTTATTTTTTTGCTAAAAAT\tG\t.\tPASS\tAC=278;AF=0.0736424;AFR_AF=0.0329;AMR_AF=0.0763;AN=3775;CS=DEL_pindel;EAS_AF=0.1008;END=29074235;EUR_AF=0.0822;NS=2504;SAS_AF=0.0905;SVTYPE=DEL\tGT\t0\nX\t29087035\tDEL_pindel_53378\tTTGTAATAGTCTAGGTCAGAGTAAGTCAGAGCTGAATTAAAAATAGCTGGATACAAAACAGCTTTTCTCTTCCATGCAATAGTGTGTTTCCTCCCTAAGCCCCACTCTCTCCCAGCGAATACAGTTAGTCTTGTTTTATGAAACCAGTTAAGTTATTAAGATTCAAGCACCCAGCTTTCTTTGCTTAGCTAGCTCAGGTAAATTGCTTTAATGATGTCCATACTGTAAGGGAAGCATATTCTAATA\tT\t.\tPASS\tAC=137;AF=0.0362914;AFR_AF=0.0179;AMR_AF=0.0115;AN=3775;CS=DEL_pindel;EAS_AF=0.0537;END=29087280;EUR_AF=0.0326;NS=2504;SAS_AF=0.0655;SVTYPE=DEL\tGT\t0\nX\t29121653\tALU_umary_ALU_12622\tG\t<INS:ME:ALU>\t.\tPASS\tAC=80;AF=0.021192;AFR_AF=0.0758;AMR_AF=0.0076;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0;MEINFO=AluUndef,1,281,+;NS=2504;SAS_AF=0;SVLEN=280;SVTYPE=ALU;TSD=AAGAAAACACTGGGG\tGT\t0\nX\t29221641\tYL_CN_IBS_4056\tC\t<CN0>\t100\tPASS\tAC=8;AF=0.00264901;AFR_AF=0.004;AMR_AF=0;AN=2542;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0;END=29228745;EUR_AF=0.0078;NS=2504;SAS_AF=0;SVTYPE=DEL\tGT\t.\nX\t29268334\tL1_umary_LINE1_3026\tG\t<INS:ME:LINE1>\t.\tPASS\tAC=3;AF=0.0007947;AFR_AF=0.003;AMR_AF=0;AN=3775;CS=L1_umary;EAS_AF=0;EUR_AF=0;MEINFO=LINE1,2190,6019,-;NS=2504;SAS_AF=0;SVLEN=3829;SVTYPE=LINE1;TSD=null\tGT\t0\nX\t29270196\tALU_umary_ALU_12623\tC\t<INS:ME:ALU>\t.\tPASS\tAC=11;AF=0.00291391;AFR_AF=0.01;AMR_AF=0.0019;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0;MEINFO=AluY,1,268,-;NS=2504;SAS_AF=0;SVLEN=267;SVTYPE=ALU;TSD=null\tGT\t0\nX\t29341826\tDEL_pindel_53383\tTTTTTTATATATATATATATATATATATATATATATATATATATATATATATATATA\tT\t.\tPASS\tAC=689;AF=0.182517;AFR_AF=0.2263;AMR_AF=0.1718;AN=3775;CS=DEL_pindel;EAS_AF=0.1531;END=29341882;EUR_AF=0.1253;NS=2504;SAS_AF=0.2214;SVTYPE=DEL\tGT\t0\nX\t29372132\tL1_umary_LINE1_3027\tA\t<INS:ME:LINE1>\t.\tPASS\tAC=6;AF=0.0015894;AFR_AF=0.002;AMR_AF=0.0057;AN=3775;CS=L1_umary;EAS_AF=0;EUR_AF=0.0013;MEINFO=LINE1,5440,6005,+;NS=2504;SAS_AF=0;SVLEN=565;SVTYPE=LINE1;TSD=AAAAAATA\tGT\t0\nX\t29535983\tALU_umary_ALU_12624\tA\t<INS:ME:ALU>\t.\tPASS\tAC=1;AF=0.0002649;AFR_AF=0.001;AMR_AF=0;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0;MEINFO=AluUndef,1,278,-;NS=2504;SAS_AF=0;SVLEN=277;SVTYPE=ALU;TSD=null\tGT\t0\nX\t29556712\tDEL_pindel_53389\tCCCAAAGTGCTAGGATTATAGGGATAAGCCACTGCTCCTGGCCAAGGTTTTTTTTTTTTTTAAAGCAATTTA\tC\t.\tPASS\tAC=1099;AF=0.291126;AFR_AF=0.2782;AMR_AF=0.2996;AN=3775;CS=DEL_pindel;EAS_AF=0.2801;END=29556783;EUR_AF=0.2781;NS=2504;SAS_AF=0.3287;SVTYPE=DEL\tGT\t1\nX\t29600102\tUW_VH_6391\tG\t<CN0>\t100\tPASS\tAC=15;AF=0.00556291;AFR_AF=0.002;AMR_AF=0;AN=2542;CIEND=0,263;CIPOS=-351,0;CS=DEL_union;EAS_AF=0.0183;END=29609129;EUR_AF=0.0065;MC=YL_CN_CHS_4700,BI_GS_DEL1_B1_P2927_335;NS=2504;SAS_AF=0;SVTYPE=DEL\tGT\t.\nX\t29602048\tL1_umary_LINE1_3028\tT\t<INS:ME:LINE1>\t.\tPASS\tAC=33;AF=0.00874172;AFR_AF=0.008;AMR_AF=0.0038;AN=3775;CS=L1_umary;EAS_AF=0.0013;EUR_AF=0.0039;MEINFO=LINE1,2589,5018,-;NS=2504;SAS_AF=0.0265;SVLEN=2429;SVTYPE=LINE1;TSD=null\tGT\t0\nX\t29625062\tALU_umary_ALU_12625\tA\t<INS:ME:ALU>\t.\tPASS\tAC=2;AF=0.0005298;AFR_AF=0.002;AMR_AF=0;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0;MEINFO=AluYa4_5,1,280,-;NS=2504;SAS_AF=0;SVLEN=279;SVTYPE=ALU;TSD=null\tGT\t0\nX\t29736350\tYL_CN_FIN_4276\tA\t<CN0>\t100\tPASS\tAC=16;AF=0.0312583;AFR_AF=0.0209;AMR_AF=0.0248;AN=2542;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0.0236;END=29738935;EUR_AF=0.0548;NS=2504;SAS_AF=0.0334;SVTYPE=DEL\tGT\t.\nX\t29817894\tL1_umary_LINE1_3029\tT\t<INS:ME:LINE1>\t.\tPASS\tAC=1;AF=0.0002649;AFR_AF=0;AMR_AF=0;AN=3775;CS=L1_umary;EAS_AF=0.0013;EUR_AF=0;MEINFO=LINE1,5149,5993,-;NS=2504;SAS_AF=0;SVLEN=844;SVTYPE=LINE1;TSD=null\tGT\t0\nX\t30021349\tUW_VH_3575\tC\t<CN0>\t100\tPASS\tAC=14;AF=0.0127152;AFR_AF=0.008;AMR_AF=0.0038;AN=2542;CIEND=0,167;CIPOS=-362,0;CS=DEL_union;EAS_AF=0.0105;END=30023422;EUR_AF=0.0222;NS=2504;SAS_AF=0.0181;SVTYPE=DEL\tGT\t.\nX\t30046608\tBI_GS_DEL1_B1_P2928_28\tT\t<CN0>\t100\tPASS\tAC=9;AF=0.00238411;AFR_AF=0.003;AMR_AF=0.0057;AN=2542;CIEND=-6,6;CIPOS=-6,6;CS=DEL_union;EAS_AF=0;END=30057664;EUR_AF=0.0039;MC=YL_CN_CLM_3826;NS=2504;SAS_AF=0;SVTYPE=DEL\tGT\t.\nX\t30111950\tL1_umary_LINE1_3030\tC\t<INS:ME:LINE1>\t.\tPASS\tAC=1;AF=0.0002649;AFR_AF=0;AMR_AF=0;AN=3775;CS=L1_umary;EAS_AF=0;EUR_AF=0;MEINFO=LINE1,4952,5876,+;NS=2504;SAS_AF=0.0014;SVLEN=924;SVTYPE=LINE1;TSD=null\tGT\t0\nX\t30209790\tALU_umary_ALU_12626\tA\t<INS:ME:ALU>\t.\tPASS\tAC=1;AF=0.0002649;AFR_AF=0.001;AMR_AF=0;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0;MEINFO=AluYa3_1,1,281,-;NS=2504;SAS_AF=0;SVLEN=280;SVTYPE=ALU;TSD=null\tGT\t0\nX\t30218098\tALU_umary_ALU_12627\tA\t<INS:ME:ALU>\t.\tPASS\tAC=1;AF=0.0002649;AFR_AF=0;AMR_AF=0;AN=3775;CS=ALU_umary;EAS_AF=0.0013;EUR_AF=0;MEINFO=AluUndef,1,281,+;NS=2504;SAS_AF=0;SVLEN=280;SVTYPE=ALU;TSD=null\tGT\t0\nX\t30242851\tDEL_pindel_53395\tCCCAAGATCTGTTAGATACAAATGCCAGATCCCTTAAAAGTAATTAAGAAAGCACCCATCCAGAACACCGGGGTCCCGAAGAGTTCAGGCCCTGCTGTTGACCCTTGGAGGTCCTGAATTCAATGGCTGGATGAAATATAGAGAGGCCTTGAAAGATGAAGCAGAGAGAGCCTGAGCCAGAGCTGCAGCCAGGGCTGTGCTACTGCCATGGCCATGGCACATA\tC\t.\tPASS\tAC=1250;AF=0.331126;AFR_AF=0.3509;AMR_AF=0.3206;AN=3775;CS=DEL_pindel;EAS_AF=0.3102;END=30243073;EUR_AF=0.3094;NS=2504;SAS_AF=0.3565;SVTYPE=DEL\tGT\t1\nX\t30299183\tDUP_gs.X_CNV_X_30299183_30308794\tG\t<CN0>,<CN2>\t.\tPASS\tAC=0,13;AF=0,0.00344371;AFR_AF=0,0.013;AMR_AF=0,0;AN=3775;CS=DUP_gs;EAS_AF=0,0;END=30308794;EUR_AF=0,0;NS=2504;SAS_AF=0,0;SVTYPE=DUP\tGT\t0\nX\t30313490\tUW_VH_18360\tA\t<CN0>\t100\tPASS\tAC=8;AF=0.00370861;AFR_AF=0.003;AMR_AF=0.0019;AN=2542;CIEND=0,133;CIPOS=-187,0;CS=DEL_union;EAS_AF=0;END=30317409;EUR_AF=0.0104;NS=2504;SAS_AF=0.0028;SVTYPE=DEL\tGT\t.\nX\t30347766\tBI_GS_DEL1_B4_P2928_61\tG\t<CN0>\t100\tPASS\tAC=135;AF=0.129007;AFR_AF=0.0877;AMR_AF=0.1088;AN=2542;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.2042;END=30348599;EUR_AF=0.1253;MC=UW_VH_5485,EM_DL_DEL101167833;NS=2504;SAS_AF=0.1253;SVTYPE=DEL\tGT\t.\nX\t30501131\tDUP_gs.X_CNV_X_30501131_30577809\tA\t<CN0>,<CN2>\t.\tPASS\tAC=0,2;AF=0,0.0005298;AFR_AF=0,0.002;AMR_AF=0,0;AN=3775;CS=DUP_gs;EAS_AF=0,0;END=30577809;EUR_AF=0,0;NS=2504;SAS_AF=0,0;SVTYPE=DUP\tGT\t0\nX\t30559712\tDEL_pindel_53398\tAGTTTTTGAATTGTTGGAATTTGCCATTTGATATTGGAATAAATTCTTAAATAATGTGGTTATGTTATACATAATTTTAATGGGCTTTTCTCGCTTTATGATTTTGTTTTGTTTTGTTTGTTAAAGCAAATTTAAGCGATTTTCTTATTCGAGTTCAAAACGGGTCATAAAGCAGCAGAGACAGCTTGCAACATCAACAGCGCACTTGGCCCAGAAACTGCTAACGAATGTACAGTGCGGTGGTGGTTCAAGAAGTTTTGCAAAGGAGACAATAGCTTTGAAGATGAGAGGCATAGTGGCTG\tA\t.\tPASS\tAC=1343;AF=0.355762;AFR_AF=0.4317;AMR_AF=0.3263;AN=3775;CS=DEL_pindel;EAS_AF=0.3115;END=30560013;EUR_AF=0.3159;NS=2504;SAS_AF=0.3607;SVTYPE=DEL\tGT\t1\nX\t30622593\tBI_GS_DEL1_B4_P2928_93\tC\t<CN0>\t100\tPASS\tAC=13;AF=0.00609272;AFR_AF=0.003;AMR_AF=0;AN=2542;CIEND=-3,4;CIPOS=-3,4;CS=DEL_union;EAS_AF=0.0013;END=30625691;EUR_AF=0.0052;MC=UW_VH_11779,YL_CN_ITU_4650,YL_CN_PJL_5010;NS=2504;SAS_AF=0.0209;SVTYPE=DEL\tGT\t.\nX\t30653506\tYL_CN_CEU_5403\tC\t<CN0>\t100\tPASS\tAC=6;AF=0.0018543;AFR_AF=0.003;AMR_AF=0.0019;AN=2542;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0;END=30658757;EUR_AF=0.0039;NS=2504;SAS_AF=0;SVTYPE=DEL\tGT\t.\nX\t30665974\tALU_umary_ALU_12628\tT\t<INS:ME:ALU>\t.\tPASS\tAC=78;AF=0.0206622;AFR_AF=0.001;AMR_AF=0.0439;AN=3775;CS=ALU_umary;EAS_AF=0.0013;EUR_AF=0.064;MEINFO=AluUndef,10,277,-;NS=2504;SAS_AF=0.0056;SVLEN=267;SVTYPE=ALU;TSD=CAATATTCATTCATT\tGT\t0\nX\t30676516\tBI_GS_DEL1_B3_P2928_25\tT\t<CN0>\t100\tPASS\tAC=14;AF=0.0304636;AFR_AF=0.0279;AMR_AF=0.0324;AN=2542;CIEND=-52,52;CIPOS=-52,52;CS=DEL_union;EAS_AF=0.0236;END=30677940;EUR_AF=0.0339;NS=2504;SAS_AF=0.0362;SVTYPE=DEL\tGT\t.\nX\t30820402\tDEL_pindel_53413\tGCCTTGTGCCTTCCTTGCCTTGCCTTCTGCCTGGCCTTGCCTTGCCTTGTGCCTTC\tG\t.\tPASS\tAC=456;AF=0.120795;AFR_AF=0.0837;AMR_AF=0.1298;AN=3775;CS=DEL_pindel;EAS_AF=0.1152;END=30820457;EUR_AF=0.1514;NS=2504;SAS_AF=0.1393;SVTYPE=DEL\tGT\t0\nX\t30821442\tDEL_pindel_53414\tTGCCTTGCCTTGCCTTGCGCCTTGCCTTGTGCCTTACCTAGCTTTGCCTTGTGCCTTACCTAGCCGTGCCTTGTGCCTTGCCTTGCCTTGCTTTGTTCTTGGCCTTGTCTTGCCACGTGTCCTGCCTTGGTTTGATTTTTGCCCTGCCTTGCCTTGCCTTGCCTTGCCTTTCCTTGTGCCTAGCCTTGCCTTGCCTTCTGTTTTGCCGTGCCTTTTTTGCCTTGCCTTGTGCCTTGACATGCCTTGCCTTGTGTCTTACTTGCCTTGCTTTGA\tT\t.\tPASS\tAC=29;AF=0.00768212;AFR_AF=0.011;AMR_AF=0.0038;AN=3775;CS=DEL_pindel;EAS_AF=0.0039;END=30821714;EUR_AF=0.0117;NS=2504;SAS_AF=0.0056;SVTYPE=DEL\tGT\t0\nX\t30904726\tDUP_gs.X_CNV_X_30904726_31026592\tG\t<CN0>,<CN2>\t.\tPASS\tAC=0,1;AF=0,0.0002649;AFR_AF=0,0;AMR_AF=0,0;AN=3775;CS=DUP_gs;EAS_AF=0,0.0013;END=31026592;EUR_AF=0,0;NS=2504;SAS_AF=0,0;SVTYPE=DUP\tGT\t0\nX\t31000874\tUW_VH_12232\tC\t<CN0>\t100\tPASS\tAC=6;AF=0.0015894;AFR_AF=0.003;AMR_AF=0;AN=2542;CIEND=0,144;CIPOS=-140,0;CS=DEL_union;EAS_AF=0;END=31006590;EUR_AF=0.0039;MC=YL_CN_ACB_5037;NS=2504;SAS_AF=0;SVTYPE=DEL\tGT\t.\nX\t31081309\tBI_GS_DEL1_B5_P2929_88\tC\t<CN0>\t100\tPASS\tAC=11;AF=0.0336424;AFR_AF=0.0369;AMR_AF=0.0382;AN=2542;CIEND=-26,27;CIPOS=-26,27;CS=DEL_union;EAS_AF=0.0209;END=31085150;EUR_AF=0.0313;NS=2504;SAS_AF=0.0418;SVTYPE=DEL\tGT\t.\nX\t31155691\tUW_VH_12882\tA\t<CN0>\t100\tPASS\tAC=11;AF=0.0100662;AFR_AF=0.0169;AMR_AF=0.0038;AN=2542;CIEND=0,156;CIPOS=-129,0;CS=DEL_union;EAS_AF=0.0092;END=31157804;EUR_AF=0.0131;MC=BI_GS_DEL1_B5_P2929_156;NS=2504;SAS_AF=0.0028;SVTYPE=DEL\tGT\t.\nX\t31185139\tEM_DL_DEL101168028\tA\t<CN0>\t100\tPASS\tAC=161;AF=0.208477;AFR_AF=0.1834;AMR_AF=0.2156;AN=2542;CIEND=-150,150;CIPOS=-150,150;CS=DEL_union;EAS_AF=0.1937;END=31185973;EUR_AF=0.2076;NS=2504;SAS_AF=0.2549;SVTYPE=DEL\tGT\t.\nX\t31275320\tALU_umary_ALU_12629\tC\t<INS:ME:ALU>\t.\tPASS\tAC=545;AF=0.144371;AFR_AF=0.1296;AMR_AF=0.1508;AN=3775;CS=ALU_umary;EAS_AF=0.199;EUR_AF=0.0979;MEINFO=AluYa5,1,281,+;NS=2504;SAS_AF=0.1518;SVLEN=280;SVTYPE=ALU;TSD=AGAAGTGGGCGTCTC\tGT\t0\nX\t31346366\tUW_VH_13004\tG\t<CN0>\t100\tPASS\tAC=203;AF=0.224371;AFR_AF=0.2443;AMR_AF=0.2233;AN=2542;CIEND=0,360;CIPOS=-293,0;CS=DEL_union;EAS_AF=0.1937;END=31346887;EUR_AF=0.2402;MC=BI_GS_DEL1_B3_P2929_9;NS=2504;SAS_AF=0.2131;SVTYPE=DEL\tGT\t.\nX\t31370330\tALU_umary_ALU_12630\tC\t<INS:ME:ALU>\t.\tPASS\tAC=37;AF=0.00980132;AFR_AF=0.001;AMR_AF=0.0115;AN=3775;CS=ALU_umary;EAS_AF=0.0013;EUR_AF=0.0339;MEINFO=AluYb7_2,1,281,+;NS=2504;SAS_AF=0.0042;SVLEN=280;SVTYPE=ALU;TSD=AAGAATGTGATACC\tGT\t0\nX\t31379318\tALU_umary_ALU_12631\tT\t<INS:ME:ALU>\t.\tPASS\tAC=47;AF=0.0124503;AFR_AF=0.0449;AMR_AF=0.0038;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0;MEINFO=AluYa5,1,281,-;NS=2504;SAS_AF=0;SVLEN=280;SVTYPE=ALU;TSD=CTAGCTTCCCTTTTTT\tGT\t0\nX\t31418407\tDEL_pindel_53434\tATGCAACCATTTATCTCTCACCTACCTGTGACCTGGAAGCCCCTCCTTGCTTCAAGTTGTCCCACCCTTCTGGATGGAACAAATGTACATCTTACATATAT\tA\t.\tPASS\tAC=542;AF=0.143576;AFR_AF=0.0768;AMR_AF=0.1737;AN=3775;CS=DEL_pindel;EAS_AF=0.1806;END=31418507;EUR_AF=0.1606;NS=2504;SAS_AF=0.1574;SVTYPE=DEL\tGT\t1\nX\t31470360\tALU_umary_ALU_12632\tA\t<INS:ME:ALU>\t.\tPASS\tAC=201;AF=0.053245;AFR_AF=0.0907;AMR_AF=0.0229;AN=3775;CS=ALU_umary;EAS_AF=0.0851;EUR_AF=0.0222;MEINFO=AluYc2,1,281,-;NS=2504;SAS_AF=0.0223;SVLEN=280;SVTYPE=ALU;TSD=AAAAAAATAGCA\tGT\t0\nX\t31505930\tEM_DL_DEL101168102\tA\t<CN0>\t100\tPASS\tAC=150;AF=0.18702;AFR_AF=0.1755;AMR_AF=0.1794;AN=2542;CIEND=-150,150;CIPOS=-150,150;CS=DEL_union;EAS_AF=0.1754;END=31506850;EUR_AF=0.201;NS=2504;SAS_AF=0.2061;SVTYPE=DEL\tGT\t.\nX\t31531698\tDUP_gs.X_CNV_X_31531698_31548491\tA\t<CN0>,<CN2>\t.\tPASS\tAC=0,1;AF=0,0.0002649;AFR_AF=0,0;AMR_AF=0,0;AN=3775;CS=DUP_gs;EAS_AF=0,0.0013;END=31548491;EUR_AF=0,0;NS=2504;SAS_AF=0,0;SVTYPE=DUP\tGT\t0\nX\t31750354\tL1_umary_LINE1_3031\tT\t<INS:ME:LINE1>\t.\tPASS\tAC=1;AF=0.0002649;AFR_AF=0;AMR_AF=0;AN=3775;CS=L1_umary;EAS_AF=0.0013;EUR_AF=0;MEINFO=LINE1,2522,4010,-;NS=2504;SAS_AF=0;SVLEN=1488;SVTYPE=LINE1;TSD=null\tGT\t0\nX\t31764309\tYL_CN_IBS_4060\tC\t<CN0>\t100\tPASS\tAC=8;AF=0.00211921;AFR_AF=0.003;AMR_AF=0;AN=2542;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0;END=31779911;EUR_AF=0.0065;NS=2504;SAS_AF=0;SVTYPE=DEL\tGT\t.\nX\t31811560\tBI_GS_DEL1_B1_P2929_512\tA\t<CN0>\t100\tPASS\tAC=143;AF=0.194172;AFR_AF=0.2104;AMR_AF=0.187;AN=2542;CIEND=-3,4;CIPOS=-3,4;CS=DEL_union;EAS_AF=0.1846;END=31812145;EUR_AF=0.1984;NS=2504;SAS_AF=0.1825;SVTYPE=DEL\tGT\t.\nX\t31823711\tUW_VH_7001\tA\t<CN0>\t100\tPASS\tAC=7;AF=0.00238411;AFR_AF=0.002;AMR_AF=0.0076;AN=2542;CIEND=0,110;CIPOS=-195,0;CS=DEL_union;EAS_AF=0;END=31828029;EUR_AF=0.0039;MC=BI_GS_DEL1_B1_P2929_521;NS=2504;SAS_AF=0;SVTYPE=DEL\tGT\t.\nX\t32001086\tALU_umary_ALU_12633\tT\t<INS:ME:ALU>\t.\tPASS\tAC=780;AF=0.206623;AFR_AF=0.0449;AMR_AF=0.1889;AN=3775;CS=ALU_umary;EAS_AF=0.2605;EUR_AF=0.2272;MEINFO=AluUndef,1,258,-;NS=2504;SAS_AF=0.3663;SVLEN=257;SVTYPE=ALU;TSD=TCAGAGCTTTTGTT\tGT\t0\nX\t32038514\tL1_umary_LINE1_3032\tC\t<INS:ME:LINE1>\t.\tPASS\tAC=1;AF=0.0002649;AFR_AF=0;AMR_AF=0.0019;AN=3775;CS=L1_umary;EAS_AF=0;EUR_AF=0;MEINFO=LINE1,4274,5996,+;NS=2504;SAS_AF=0;SVLEN=1722;SVTYPE=LINE1;TSD=null\tGT\t0\nX\t32068702\tUW_VH_16769\tT\t<CN0>\t100\tPASS\tAC=8;AF=0.00211921;AFR_AF=0.002;AMR_AF=0.0019;AN=2542;CIEND=0,104;CIPOS=-113,0;CS=DEL_union;EAS_AF=0;END=32078442;EUR_AF=0.0052;NS=2504;SAS_AF=0.0014;SVTYPE=DEL\tGT\t.\nX\t32103731\tDEL_pindel_53445\tATACGTATATATATACACATATATACGTATATATATGTGTGTATATATACGTATATATACACACGCGTATATATATACGTATATATACACACGCGTATATATATACACATACACTGATATTGATGGCT\tA\t.\tPASS\tAC=1145;AF=0.303311;AFR_AF=0.2951;AMR_AF=0.3092;AN=3775;CS=DEL_pindel;EAS_AF=0.2906;END=32103858;EUR_AF=0.2859;NS=2504;SAS_AF=0.3426;SVTYPE=DEL\tGT\t1\nX\t32226507\tL1_umary_LINE1_3033\tC\t<INS:ME:LINE1>\t.\tPASS\tAC=1;AF=0.0002649;AFR_AF=0;AMR_AF=0;AN=3775;CS=L1_umary;EAS_AF=0.0013;EUR_AF=0;MEINFO=LINE1,4436,5995,-;NS=2504;SAS_AF=0;SVLEN=1559;SVTYPE=LINE1;TSD=null\tGT\t0\nX\t32235660\tDEL_pindel_53451\tCTGAAAGGAGTAATAAGTTCTAGTGTTCTATTGCATAGTAATATGAACAAAGTTACCAATATTGTGCTGTATATTTCAAAATAGTGAAAGAGAATTTTAAATTTTCTCACCACAGAGAAATTATAAATGTTTGAGGCTATGGATCTGCCAAGAAACCTGATTTGATCATTACACAA\tC\t.\tPASS\tAC=1148;AF=0.304106;AFR_AF=0.2971;AMR_AF=0.2958;AN=3775;CS=DEL_pindel;EAS_AF=0.2997;END=32235835;EUR_AF=0.295;NS=2504;SAS_AF=0.3343;SVTYPE=DEL\tGT\t1\nX\t32298048\tDEL_pindel_53454\tGTACCCCACATATATACACATATATATGTGTAACCCATATATATATGTACCCCACATATATATATATGTACCCCACATATATATATGTACCCCACATATATATA\tG\t.\tPASS\tAC=962;AF=0.254834;AFR_AF=0.2323;AMR_AF=0.2385;AN=3775;CS=DEL_pindel;EAS_AF=0.2605;END=32298151;EUR_AF=0.2533;NS=2504;SAS_AF=0.2939;SVTYPE=DEL\tGT\t1\nX\t32332915\tDEL_pindel_53456\tCACTGGTCATTAGAGAAATGCAAGTCAAAACCACAACGAGATAGCATCTCACACCAGTTAGAATGGCGATCATTAAAAAGTCAGGAAACAACTGATGCTGGAGAAGATGTGGAGAAATAGGAACTCTTTTACACTGTTGGTGGGAGTGTAAATTAGTTCCACCATTGTGGAAGACAGTGTGCAGATTCCTCAAGGATCTAGAACCAGAAATACCATTTGACCCAGCAATCCCATTACTGGATATATACCCAAAGGATTATAAATCATCCTACTATAAAGACACATGCACACGTATGTTTATTGCAGCACTGTTCACAATAGCAAAGAATTGCAACCAACCCAAATGCCCACCAGTGATAGACTGGATAAAGAAAAT\tC\t.\tPASS\tAC=920;AF=0.243709;AFR_AF=0.2144;AMR_AF=0.2347;AN=3775;CS=DEL_pindel;EAS_AF=0.2539;END=32333290;EUR_AF=0.2454;NS=2504;SAS_AF=0.2786;SVTYPE=DEL\tGT\t1\nX\t32354096\tDEL_pindel_53457\tTGTTATATATAACGTGTATATATAACGTTATATATAACGTGTATATATAAC\tT\t.\tPASS\tAC=1163;AF=0.308079;AFR_AF=0.2931;AMR_AF=0.3168;AN=3775;CS=DEL_pindel;EAS_AF=0.2866;END=32354146;EUR_AF=0.3068;NS=2504;SAS_AF=0.3468;SVTYPE=DEL\tGT\t1\nX\t32379285\tL1_umary_LINE1_3034\tA\t<INS:ME:LINE1>\t.\tPASS\tAC=55;AF=0.0145695;AFR_AF=0;AMR_AF=0.0992;AN=3775;CS=L1_umary;EAS_AF=0.0013;EUR_AF=0.0026;MEINFO=LINE1,4825,5140,-;NS=2504;SAS_AF=0;SVLEN=315;SVTYPE=LINE1;TSD=null\tGT\t0\nX\t32391263\tBI_GS_DEL1_B4_P2930_47\tA\t<CN0>\t100\tPASS\tAC=360;AF=0.332715;AFR_AF=0.329;AMR_AF=0.3111;AN=2542;CIEND=-2,3;CIPOS=-2,3;CS=DEL_union;EAS_AF=0.3063;END=32391578;EUR_AF=0.3316;NS=2504;SAS_AF=0.383;SVTYPE=DEL\tGT\t.\nX\t32423300\tYL_CN_PJL_5012\tA\t<CN0>\t100\tPASS\tAC=70;AF=0.132185;AFR_AF=0.1555;AMR_AF=0.1126;AN=2542;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0.1178;END=32425758;EUR_AF=0.1358;NS=2504;SAS_AF=0.1253;SVTYPE=DEL\tGT\t.\nX\t32430304\tBI_GS_DEL1_B3_P2930_24\tA\t<CN0>\t100\tPASS\tAC=44;AF=0.0839735;AFR_AF=0.0818;AMR_AF=0.0744;AN=2542;CIEND=-22,22;CIPOS=-22,22;CS=DEL_union;EAS_AF=0.0838;END=32431577;EUR_AF=0.0927;NS=2504;SAS_AF=0.085;SVTYPE=DEL\tGT\t.\nX\t32430687\tL1_umary_LINE1_3035\tT\t<INS:ME:LINE1>\t.\tPASS\tAC=8;AF=0.00211921;AFR_AF=0;AMR_AF=0;AN=3775;CS=L1_umary;EAS_AF=0;EUR_AF=0;MEINFO=LINE1,1,3786,-;NS=2504;SAS_AF=0.0111;SVLEN=3785;SVTYPE=LINE1;TSD=null\tGT\t0\nX\t32468501\tDEL_pindel_53460\tTGATTGAAATCTTTAGTTCAATATTCTAAATAAATCAGCTTTTTGGCATCACTGAGCATAGAGATTGTTTTTACACAAATTGCATTTTGACTTTAGTAATTATAGTATAATCAACAAGTTTGATTACCATTCATCATTTAATATGTGCTACTGTGTTCTGTGCCAGCCATGTCATAAGTGCTACCTCATTAGATCTTTACCCAAACCTTCTCGGATGTGTTTTGTTACCTCTATATTGGACATTAGAAAACTGAGGTTCAGAGAGTTTAAGGAAATCATCCTCAGAGTTATATCCTCTCTTTCTCATAGTTTCTGTTAAGCGGGTCTCAAATGTTCCATGAGCTGAAGAAGGAGCATGCTGTAGTCAGTCTAATGAATAAAATTACAATTTATGCTCATTATAAATAACCCAAGCAACTATATAAAAATGTA\tT\t.\tPASS\tAC=543;AF=0.143841;AFR_AF=0.1256;AMR_AF=0.1412;AN=3775;CS=DEL_pindel;EAS_AF=0.1649;END=32468932;EUR_AF=0.1632;NS=2504;SAS_AF=0.1281;SVTYPE=DEL\tGT\t1\nX\t32550298\tUW_VH_15523\tT\t<CN0>\t100\tPASS\tAC=11;AF=0.00397351;AFR_AF=0.008;AMR_AF=0;AN=2542;CIEND=0,184;CIPOS=-182,0;CS=DEL_union;EAS_AF=0.0026;END=32553844;EUR_AF=0.0065;MC=YL_CN_ASW_4517,BI_GS_DEL1_B5_P2930_451;NS=2504;SAS_AF=0;SVTYPE=DEL\tGT\t.\nX\t32679357\tALU_umary_ALU_12634\tT\t<INS:ME:ALU>\t.\tPASS\tAC=1;AF=0.0002649;AFR_AF=0;AMR_AF=0;AN=3775;CS=ALU_umary;EAS_AF=0.0013;EUR_AF=0;MEINFO=AluYa2,32,222,-;NS=2504;SAS_AF=0;SVLEN=190;SVTYPE=ALU;TSD=null\tGT\t0\nX\t32682318\tBI_GS_DEL1_B3_P2930_37\tT\t<CN0>\t100\tPASS\tAC=7;AF=0.0188079;AFR_AF=0.0179;AMR_AF=0.0191;AN=2542;CIEND=-17,18;CIPOS=-17,18;CS=DEL_union;EAS_AF=0.0183;END=32684596;EUR_AF=0.0235;NS=2504;SAS_AF=0.0153;SVTYPE=DEL\tGT\t.\nX\t32701649\tUW_VH_7142\tC\t<CN0>\t100\tPASS\tAC=144;AF=0.184636;AFR_AF=0.1815;AMR_AF=0.1737;AN=2542;CIEND=0,262;CIPOS=-270,0;CS=DEL_union;EAS_AF=0.2134;END=32702687;EUR_AF=0.1593;MC=BI_GS_DEL1_B2_P2930_349;NS=2504;SAS_AF=0.1936;SVTYPE=DEL\tGT\t.\nX\t32721051\tBI_GS_DEL1_B5_P2930_585\tT\t<CN0>\t100\tPASS\tAC=10;AF=0.00291391;AFR_AF=0.005;AMR_AF=0.0019;AN=2542;CIEND=-6,7;CIPOS=-6,7;CS=DEL_union;EAS_AF=0;END=32810353;EUR_AF=0.0065;MC=YL_CN_ASW_4518;NS=2504;SAS_AF=0;SVTYPE=DEL\tGT\t.\nX\t32732633\tUW_VH_18663\tG\t<CN0>\t100\tPASS\tAC=10;AF=0.00291391;AFR_AF=0.005;AMR_AF=0;AN=2542;CIEND=0,217;CIPOS=-134,0;CS=DEL_union;EAS_AF=0;END=32739759;EUR_AF=0.0052;MC=BI_GS_DEL1_B3_P2930_39;NS=2504;SAS_AF=0.0028;SVTYPE=DEL\tGT\t.\nX\t32738366\tUW_VH_7131\tC\t<CN0>\t100\tPASS\tAC=9;AF=0.00291391;AFR_AF=0.005;AMR_AF=0.0019;AN=2542;CIEND=0,157;CIPOS=-140,0;CS=DEL_union;EAS_AF=0.0013;END=32748132;EUR_AF=0.0052;MC=BI_GS_DEL1_B3_P2930_41,YL_CN_GWD_5814;NS=2504;SAS_AF=0;SVTYPE=DEL\tGT\t.\nX\t32745923\tALU_umary_ALU_12635\tT\t<INS:ME:ALU>\t.\tPASS\tAC=69;AF=0.0182781;AFR_AF=0.0678;AMR_AF=0;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0.0013;MEINFO=AluYa5,24,281,-;NS=2504;SAS_AF=0;SVLEN=257;SVTYPE=ALU;TSD=AAAATATATTCCAATTCACTTT\tGT\t0\nX\t32761413\tDUP_gs.X_CNV_X_32761413_32827319\tC\t<CN0>,<CN2>\t.\tPASS\tAC=0,3;AF=0,0.0007947;AFR_AF=0,0.002;AMR_AF=0,0;AN=3775;CS=DUP_gs;EAS_AF=0,0.0013;END=32827319;EUR_AF=0,0;NS=2504;SAS_AF=0,0;SVTYPE=DUP\tGT\t0\nX\t32767842\tDUP_gs.X_CNV_X_32767842_32805506\tA\t<CN0>,<CN2>\t.\tPASS\tAC=1,1;AF=0.0002649,0.0002649;AFR_AF=0,0;AMR_AF=0,0;AN=3775;CS=DUP_gs;EAS_AF=0,0.0013;END=32805506;EUR_AF=0.0013,0;NS=2504;SAS_AF=0,0;SVTYPE=CNV\tGT\t0\nX\t32799269\tL1_umary_LINE1_3036\tT\t<INS:ME:LINE1>\t.\tPASS\tAC=5;AF=0.0013245;AFR_AF=0.004;AMR_AF=0.0019;AN=3775;CS=L1_umary;EAS_AF=0;EUR_AF=0;MEINFO=LINE1,5444,5898,-;NS=2504;SAS_AF=0;SVLEN=454;SVTYPE=LINE1;TSD=null\tGT\t0\nX\t32857913\tBI_GS_DEL1_B1_P2930_505\tC\t<CN0>\t100\tPASS\tAC=6;AF=0.00397351;AFR_AF=0.003;AMR_AF=0.0057;AN=2542;CIEND=-43,43;CIPOS=-43,43;CS=DEL_union;EAS_AF=0.0013;END=32861015;EUR_AF=0.0078;MC=YL_CN_CLM_3828;NS=2504;SAS_AF=0.0028;SVTYPE=DEL\tGT\t.\nX\t32882429\tBI_GS_DEL1_B3_P2930_47\tA\t<CN0>\t100\tPASS\tAC=8;AF=0.0333775;AFR_AF=0.0259;AMR_AF=0.0382;AN=2542;CIEND=-23,23;CIPOS=-23,23;CS=DEL_union;EAS_AF=0.0249;END=32884150;EUR_AF=0.0509;NS=2504;SAS_AF=0.0306;SVTYPE=DEL\tGT\t.\nX\t32886350\tBI_GS_DEL1_B2_P2930_433\tC\t<CN0>\t100\tPASS\tAC=211;AF=0.235232;AFR_AF=0.2473;AMR_AF=0.2328;AN=2542;CIEND=-8,8;CIPOS=-8,8;CS=DEL_union;EAS_AF=0.1924;END=32886923;EUR_AF=0.2833;NS=2504;SAS_AF=0.2145;SVTYPE=DEL\tGT\t.\nX\t32919526\tBI_GS_DEL1_B2_P2930_444\tT\t<CN0>\t100\tPASS\tAC=54;AF=0.0601325;AFR_AF=0.0917;AMR_AF=0.0496;AN=2542;CIEND=0,1;CIPOS=0,1;CS=DEL_union;EAS_AF=0.051;END=32921434;EUR_AF=0.0444;MC=YL_CN_GWD_5815,UW_VH_11947,YL_CN_ACB_5039;NS=2504;SAS_AF=0.0501;SVTYPE=DEL\tGT\t.\nX\t32929263\tBI_GS_DEL1_B3_P2930_52\tC\t<CN0>\t100\tPASS\tAC=9;AF=0.00264901;AFR_AF=0.003;AMR_AF=0.0019;AN=2542;CIEND=-25,25;CIPOS=-25,25;CS=DEL_union;EAS_AF=0;END=32969890;EUR_AF=0.0065;NS=2504;SAS_AF=0.0014;SVTYPE=DEL\tGT\t.\nX\t32987321\tBI_GS_DEL1_B2_P2930_476\tT\t<CN0>\t100\tPASS\tAC=816;AF=0.339073;AFR_AF=0.5484;AMR_AF=0.1794;AN=2542;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.2827;END=32989080;EUR_AF=0.1789;MC=EM_DL_DEL101168475,YL_CN_LWK_4156,YL_CN_ACB_5040,UW_VH_1297,YL_CN_YRI_5531,YL_CN_MSL_4005;NS=2504;SAS_AF=0.3942;SVTYPE=DEL\tGT\t.\nX\t33008942\tDEL_pindel_53469\tACACAAGGAGAAACTGTATGTGCCTGTTCTTGAAACCCACAGCAGTAATGGTAACAGAAGAATAACAAGAATACATATCTTGATTCCATATACCAAGCTTTATCCTAGAAAAGGTTGGGATTACTGGACTTAAAAGAACATGGTATTCCGTAATCAGACAACCTTAATTTGGGACCATTCTGGAGACTGCTTACCACAGTGATAATTATACCTAATTTGTTAAAATTCATTTTTTCCAATTATAATAATAATTAGAAAACTATAAAAGTATACAAATGCAGTACGTTTTATCTTAGTTTTCTTCTACTTCAAAATTATATATATTATCTAAAATTTGTTTTTCTTTTCAGGTTATTTCTAAGGTACTTTGATTTTTGTTAAATAATTCAGTTTAAATTCCACGTTTTTATGTAGAAAAAAATCAAGGATTTGATTTCTCTTATATTCAAAAGTGCAATCGTTTTCTTTCTACATTGAGATGAAAGTATTTTGGAGCATAAACAATACACGCTAAATAATTG\tA\t.\tPASS\tAC=833;AF=0.220662;AFR_AF=0.2044;AMR_AF=0.2176;AN=3775;CS=DEL_pindel;EAS_AF=0.2317;END=33009462;EUR_AF=0.2324;NS=2504;SAS_AF=0.221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MR_AF=0.1794;AN=2542;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0.4031;END=34443008;EUR_AF=0.1214;MC=YL_CN_LWK_4159,YL_CN_JPT_4689;NS=2504;SAS_AF=0.2368;SVTYPE=DEL\tGT\t.\nX\t34464346\tALU_umary_ALU_12640\tA\t<INS:ME:ALU>\t.\tPASS\tAC=58;AF=0.0153642;AFR_AF=0.001;AMR_AF=0.0229;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0.0548;MEINFO=AluUndef,3,270,-;NS=2504;SAS_AF=0.0042;SVLEN=267;SVTYPE=ALU;TSD=AAAAAACTTCCATGA\tGT\t0\nX\t34531540\tL1_umary_LINE1_3038\tT\t<INS:ME:LINE1>\t.\tPASS\tAC=1;AF=0.0002649;AFR_AF=0.001;AMR_AF=0;AN=3775;CS=L1_umary;EAS_AF=0;EUR_AF=0;MEINFO=LINE1,1,2824,+;NS=2504;SAS_AF=0;SVLEN=2823;SVTYPE=LINE1;TSD=null\tGT\t0\nX\t34747567\tL1_umary_LINE1_3039\tC\t<INS:ME:LINE1>\t.\tPASS\tAC=14;AF=0.00370861;AFR_AF=0.014;AMR_AF=0;AN=3775;CS=L1_umary;EAS_AF=0;EUR_AF=0;MEINFO=LINE1,4366,6019,+;NS=2504;SAS_AF=0;SVLEN=1653;SVTYPE=LINE1;TSD=AAAAAGATGTTTTCC\tGT\t0\nX\t34858179\tDUP_gs.X_CNV_X_34858179_34875400\tA\t<CN0>,<CN2>\t.\tPASS\tAC=0,20;AF=0,0.00529801;AFR_AF=0,0.0199;AMR_AF=0,0;AN=3775;CS=DUP_gs;EAS_AF=0,0;END=34875400;EUR_AF=0,0;NS=2504;SAS_AF=0,0;SVTYPE=DUP\tGT\t0\nX\t34942088\tL1_umary_LINE1_3040\tT\t<INS:ME:LINE1>\t.\tPASS\tAC=54;AF=0.0143046;AFR_AF=0.0528;AMR_AF=0.0019;AN=3775;CS=L1_umary;EAS_AF=0;EUR_AF=0;MEINFO=LINE1,4633,6018,-;NS=2504;SAS_AF=0;SVLEN=1385;SVTYPE=LINE1;TSD=null\tGT\t0\nX\t34957236\tDEL_pindel_53487\tGCTTCTCTCCTAAAATGTTACTATTTTTCCCTTTCCATATTCTGTTTTTTAGAATCCAGCCCACACTCTGGGGAGGGCATTTAAATTTCACCTGCTGGAGGGAGGAGTATCTATGTACATTTTTTGAAATTCTTTGTAAGAAAGACTTTTACCTTTCTCCTCATTTATTTATTTGTACAATTATTTATATCAGTATGGACTCATGAATATTTTATTTTATACTGTGTTATAATTTTTAAATTTTAATTCATTTTGTTGCTTAAATTGTTTTAACTTTGGCCATCGAGTGCTCTTTCAGTGTGGCTCCTGATCTGCTTTTATTCTTTTGTTTTCTGAGCACTTCTGTATTTTCTGGCATTACATAATACTCCAGGCTCATCTTGTGTTTTCACTGCCCCAGGCCTAGAATTACTCATTTCTCCAAGGATGTCTGTTTTTTGTTTTGCATTTGTTATTTTGGAGAATGGTATTTAGAAACCAAGATCTGGGCACTGGAGGTACCTGTTGCTAATTGGGTGTCATTTTTTT\tG\t.\tPASS\tAC=927;AF=0.245563;AFR_AF=0.2363;AMR_AF=0.2576;AN=3775;CS=DEL_pindel;EAS_AF=0.2526;END=34957763;EUR_AF=0.2324;NS=2504;SAS_AF=0.2563;SVTYPE=DEL\tGT\t1\nX\t34987883\tL1_umary_LINE1_3041\tT\t<INS:ME:LINE1>\t.\tPASS\tAC=1;AF=0.0002649;AFR_AF=0;AMR_AF=0;AN=3775;CS=L1_umary;EAS_AF=0.0013;EUR_AF=0;MEINFO=LINE1,4483,4790,+;NS=2504;SAS_AF=0;SVLEN=307;SVTYPE=LINE1;TSD=null\tGT\t0\nX\t34992622\tL1_umary_LINE1_3042\tC\t<INS:ME:LINE1>\t.\tPASS\tAC=7;AF=0.0018543;AFR_AF=0.001;AMR_AF=0;AN=3775;CS=L1_umary;EAS_AF=0;EUR_AF=0.0013;MEINFO=LINE1,5574,6009,+;NS=2504;SAS_AF=0.007;SVLEN=435;SVTYPE=LINE1;TSD=AACTC\tGT\t0\nX\t35012584\tALU_umary_ALU_12641\tT\t<INS:ME:ALU>\t.\tPASS\tAC=78;AF=0.0206622;AFR_AF=0.0768;AMR_AF=0.0019;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0;MEINFO=AluUndef,1,274,-;NS=2504;SAS_AF=0;SVLEN=273;SVTYPE=ALU;TSD=TAGACTATATTCTT\tGT\t0\nX\t35027353\tDEL_pindel_53490\tAGGAACCTGAAGATACTTATTAGGAATACTAGTTTTTAGCCTTAGAACAATG\tA\t.\tPASS\tAC=1192;AF=0.315762;AFR_AF=0.321;AMR_AF=0.3034;AN=3775;CS=DEL_pindel;EAS_AF=0.2945;END=35027404;EUR_AF=0.3081;NS=2504;SAS_AF=0.3482;SVTYPE=DEL\tGT\t1\nX\t35028103\tALU_umary_ALU_12642\tG\t<INS:ME:ALU>\t.\tPASS\tAC=2306;AF=0.610861;AFR_AF=0.5055;AMR_AF=0.6431;AN=3775;CS=ALU_umary;EAS_AF=0.712;EUR_AF=0.6123;MEINFO=AluUndef,1,281,+;NS=2504;SAS_AF=0.6253;SVLEN=280;SVTYPE=ALU;TSD=AAAAACGGCAATGAG\tGT\t1\nX\t35064121\tL1_umary_LINE1_3043\tC\t<INS:ME:LINE1>\t.\tPASS\tAC=16;AF=0.00423841;AFR_AF=0;AMR_AF=0.0076;AN=3775;CS=L1_umary;EAS_AF=0;EUR_AF=0.0131;MEINFO=LINE1,1,4675,+;NS=2504;SAS_AF=0.0028;SVLEN=4674;SVTYPE=LINE1;TSD=TAAAACTGCATTTCC\tGT\t0\nX\t35100607\tALU_umary_ALU_12643\tC\t<INS:ME:ALU>\t.\tPASS\tAC=5;AF=0.0013245;AFR_AF=0.005;AMR_AF=0;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0;MEINFO=AluUndef,13,261,+;NS=2504;SAS_AF=0;SVLEN=248;SVTYPE=ALU;TSD=null\tGT\t0\nX\t35266960\tALU_umary_ALU_12644\tG\t<INS:ME:ALU>\t.\tPASS\tAC=40;AF=0.010596;AFR_AF=0.0389;AMR_AF=0.0019;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0;MEINFO=AluYa4_4,1,274,+;NS=2504;SAS_AF=0;SVLEN=273;SVTYPE=ALU;TSD=null\tGT\t0\nX\t35308066\tDUP_gs.X_CNV_X_35308066_35484789\tA\t<CN0>,<CN2>\t.\tPASS\tAC=0,1;AF=0,0.0002649;AFR_AF=0,0;AMR_AF=0,0;AN=3775;CS=DUP_gs;EAS_AF=0,0;END=35484789;EUR_AF=0,0.0013;NS=2504;SAS_AF=0,0;SVTYPE=DUP\tGT\t0\nX\t35323501\tUW_VH_8567\tA\t<CN0>\t100\tPASS\tAC=203;AF=0.20106;AFR_AF=0.2542;AMR_AF=0.1947;AN=2542;CIEND=0,384;CIPOS=-266,0;CS=DEL_union;EAS_AF=0.1492;END=35324110;EUR_AF=0.2154;MC=BI_GS_DEL1_B5_P2933_244;NS=2504;SAS_AF=0.1713;SVTYPE=DEL\tGT\t.\nX\t35391199\tL1_umary_LINE1_3044\tT\t<INS:ME:LINE1>\t.\tPASS\tAC=20;AF=0.00529801;AFR_AF=0.0199;AMR_AF=0;AN=3775;CS=L1_umary;EAS_AF=0;EUR_AF=0;MEINFO=LINE1,4512,6019,-;NS=2504;SAS_AF=0;SVLEN=1507;SVTYPE=LINE1;TSD=null\tGT\t0\nX\t35419176\tALU_umary_ALU_12645\tT\t<INS:ME:ALU>\t.\tPASS\tAC=46;AF=0.0121854;AFR_AF=0.0429;AMR_AF=0.0057;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0;MEINFO=AluYa5,2,281,-;NS=2504;SAS_AF=0;SVLEN=279;SVTYPE=ALU;TSD=TATTT\tGT\t0\nX\t35441649\tDUP_gs.X_CNV_X_35441649_35445201\tA\t<CN0>,<CN2>\t.\tPASS\tAC=29,3;AF=0.00768212,0.0007947;AFR_AF=0.0279,0.001;AMR_AF=0.0019,0;AN=3775;CS=DUP_gs;EAS_AF=0,0;END=35445201;EUR_AF=0,0.0026;NS=2504;SAS_AF=0,0;SVTYPE=CNV\tGT\t0\nX\t35441717\tBI_GS_DEL1_B1_P2933_244\tG\t<CN0>\t100\tPASS\tAC=28;AF=0.0116556;AFR_AF=0.0309;AMR_AF=0.0038;AN=2542;CIEND=-1,1;CIPOS=-1,1;CS=DEL_union;EAS_AF=0.0052;END=35445295;EUR_AF=0.0091;MC=UW_VH_7542,YL_CN_ESN_4393,YL_CN_MSL_4008;NS=2504;SAS_AF=0;SVTYPE=DEL\tGT\t.\nX\t35549079\tUW_VH_11685\tA\t<CN0>\t100\tPASS\tAC=9;AF=0.00238411;AFR_AF=0.003;AMR_AF=0.0019;AN=2542;CIEND=0,293;CIPOS=-315,0;CS=DEL_union;EAS_AF=0.0013;END=35553722;EUR_AF=0.0052;NS=2504;SAS_AF=0;SVTYPE=DEL\tGT\t.\nX\t35627442\tBI_GS_DEL1_B2_P2933_295\tT\t<CN0>\t100\tPASS\tAC=65;AF=0.0238411;AFR_AF=0.0818;AMR_AF=0.0057;AN=2542;CIEND=0,1;CIPOS=0,1;CS=DEL_union;EAS_AF=0;END=35634397;EUR_AF=0.0065;MC=UW_VH_8095,YL_CN_ESN_4394;NS=2504;SAS_AF=0;SVTYPE=DEL\tGT\t.\nX\t35655992\tALU_umary_ALU_12646\tT\t<INS:ME:ALU>\t.\tPASS\tAC=22;AF=0.00582781;AFR_AF=0;AMR_AF=0;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0;MEINFO=AluYb7_3,1,274,+;NS=2504;SAS_AF=0.0306;SVLEN=273;SVTYPE=ALU;TSD=null\tGT\t0\nX\t35671820\tALU_umary_ALU_12647\tT\t<INS:ME:ALU>\t.\tPASS\tAC=20;AF=0.00529801;AFR_AF=0.0199;AMR_AF=0;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0;MEINFO=AluYa4_5,1,279,-;NS=2504;SAS_AF=0;SVLEN=278;SVTYPE=ALU;TSD=null\tGT\t0\nX\t35710355\tDEL_pindel_53499\tTATAGCATTTTATATATACTATATATAATATATATAGCATTATATATATACTATATATAATATATATAGCATTATATATACTATATATAATATATATAGCATTATATATACTATATATACTATATATAGTATTTTATATATATACTATATATACTATATATAGTATTATATATATAAACTATATATAGCATTTTACATATAAACTATATATAGTATTATATATATGCTATAC\tT\t.\tPASS\tAC=1085;AF=0.287417;AFR_AF=0.3111;AMR_AF=0.313;AN=3775;CS=DEL_pindel;EAS_AF=0.2238;END=35710586;EUR_AF=0.2937;NS=2504;SAS_AF=0.2967;SVTYPE=DEL\tGT\t0\nX\t35714095\tBI_GS_DEL1_B4_P2933_99\tA\t<CN0>\t100\tPASS\tAC=126;AF=0.0627815;AFR_AF=0.1785;AMR_AF=0.0344;AN=2542;CIEND=0,1;CIPOS=0,1;CS=DEL_union;EAS_AF=0.0131;END=35716002;EUR_AF=0.03;MC=UW_VH_12719,YL_CN_MSL_4010,YL_CN_GWD_5823,YL_CN_ESN_4395,UW_VH_7543;NS=2504;SAS_AF=0.0097;SVTYPE=DEL\tGT\t.\nX\t35727018\tBI_GS_DEL1_B3_P2933_18\tA\t<CN0>\t100\tPASS\tAC=7;AF=0.00211921;AFR_AF=0.003;AMR_AF=0.0019;AN=2542;CIEND=-23,24;CIPOS=-23,24;CS=DEL_union;EAS_AF=0;END=35735906;EUR_AF=0.0052;MC=YL_CN_ESN_4396;NS=2504;SAS_AF=0;SVTYPE=DEL\tGT\t.\nX\t35857036\tBI_GS_DEL1_B1_P2933_481\tG\t<CN0>\t100\tPASS\tAC=11;AF=0.00317881;AFR_AF=0.003;AMR_AF=0;AN=2542;CIEND=-10,10;CIPOS=-10,10;CS=DEL_union;EAS_AF=0.0026;END=35878354;EUR_AF=0.0052;MC=YL_CN_CHS_4704;NS=2504;SAS_AF=0.0042;SVTYPE=DEL\tGT\t.\nX\t35876507\tDEL_pindel_53502\tCTTTATAATGACTAATGAAGTTAAGTCAAAAAATTATCTGTAAACCATAGGAACCATTAACAGTTCTGCTATTTGCATCCTTACATCTTTAATGGTTAATTCCAAAGAATTCTCAGTGGAGGCAATAGTCATTAAATATATTATCTGAATCATTATCTGCAACCTGCTGATAACCAAAAGCTAAAAATCCCACAGTGATGACATGAACCCATATAAACACAGCAATCTCATTTTCATTAAGCCATTCCTTAGAAATGTGTAATGTACTTATTTTAGAAGAGAGCCAAGAACTAGCTAAAACATAAACGAAGTAATTTTTATGGGTTATTTTTATTTTATCTCTTAAATAATTTCAGCATG\tC\t.\tPASS\tAC=55;AF=0.0145695;AFR_AF=0.014;AMR_AF=0.0229;AN=3775;CS=DEL_pindel;EAS_AF=0.0157;END=35876866;EUR_AF=0.0104;NS=2504;SAS_AF=0.0125;SVTYPE=DEL\tGT\t0\nX\t35879047\tDUP_gs.X_CNV_X_35879047_35891337\tT\t<CN0>,<CN2>\t.\tPASS\tAC=0,3;AF=0,0.0007947;AFR_AF=0,0;AMR_AF=0,0;AN=3775;CS=DUP_gs;EAS_AF=0,0.0039;END=35891337;EUR_AF=0,0;NS=2504;SAS_AF=0,0;SVTYPE=DUP\tGT\t0\nX\t35901427\tUW_VH_7295\tC\t<CN0>\t100\tPASS\tAC=12;AF=0.029404;AFR_AF=0.0299;AMR_AF=0.0229;AN=2542;CIEND=0,240;CIPOS=-240,0;CS=DEL_union;EAS_AF=0.0301;END=35903509;EUR_AF=0.0274;MC=BI_GS_DEL1_B1_P2933_498;NS=2504;SAS_AF=0.0348;SVTYPE=DEL\tGT\t.\nX\t35987025\tALU_umary_ALU_12648\tT\t<INS:ME:ALU>\t.\tPASS\tAC=25;AF=0.00662252;AFR_AF=0.0239;AMR_AF=0.0019;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0;MEINFO=AluYb8,1,281,-;NS=2504;SAS_AF=0;SVLEN=280;SVTYPE=ALU;TSD=null\tGT\t0\nX\t36036371\tDEL_pindel_53507\tTTGATGTAGTCTGTAGATTTTTCCAAATACAAAATAATGTTGCTCTGCAAACAAGGTTATTTTTACCTCCTCCTTTCCAATTTGTATGCCTTTATTTCTTTCTCTTGTTTGATTGCTCTGGCTAGGATTTCCAGTACTATGTTGAGTAACAGTGGAGAAAGTGAGTATCCTTGTCATGTTTCATATCTTAGAGGAAGGCTTTCAGTTTGATACTATCTGTGGGTCTGTCATGTATGACTTTTATTACGTTGAGGAATTGTCCTTCTATCTCCAGTTTTTTGAGGGCTTTTATCATGAAAGGATGTTGAATTTTATCAAGTGTTCTTTCAGCATTAATGGAAATGATCACATGGTTTTTGTCCTTCATTCTGTTGATATGATGTATCACATTGATTGATTTACATATATTATTCCATTCTTGCATCCCAGGGATAAATCCCACTTGGTCATGATGAATGATCATTTTAATATATTGCTGAATTTGATTTGCTAGTATTTTGTTGAAGATTTTTGCATCAATATTCATCAGCGATATTGGCCTGTCCTATCTTTTTTTTTTTTTTAAATGCGTCATTGTCTGGTTTTGGTATCAGAGGAATACTGGCCTCATAGAATGAATTTGGAAGTATTCCATTGTCTTCTGTTTTTCAGAATAGTTTGAGGAGGATTGGTATTAGTTCTTTAAA\tT\t.\tPASS\tAC=758;AF=0.200795;AFR_AF=0.1904;AMR_AF=0.2118;AN=3775;CS=DEL_pindel;EAS_AF=0.2081;END=36037056;EUR_AF=0.2076;NS=2504;SAS_AF=0.1922;SVTYPE=DEL\tGT\t1\nX\t36292921\tNUMT_umich_MERGED_NUMT_203\tT\t<INS:MT>\t.\tPASS\tAC=1;AF=0.0002649;AFR_AF=0.001;AMR_AF=0;AN=3775;CIEND=-270,0;CIPOS=0,270;CS=NUMT_umich;EAS_AF=0;END=36293190;EUR_AF=0;MEND=15718;MLEN=5358;MSTART=6235;NS=2504;SAS_AF=0;SVTYPE=INS\tGT\t0\nX\t36352693\tALU_umary_ALU_12649\tG\t<INS:ME:ALU>\t.\tPASS\tAC=30;AF=0.00794702;AFR_AF=0.0299;AMR_AF=0;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0;MEINFO=AluUndef,1,280,+;NS=2504;SAS_AF=0;SVLEN=279;SVTYPE=ALU;TSD=null\tGT\t0\nX\t36475654\tBI_GS_DEL1_B5_P2934_334\tA\t<CN0>\t100\tPASS\tAC=77;AF=0.108609;AFR_AF=0.1216;AMR_AF=0.1317;AN=2542;CIEND=-1,1;CIPOS=-1,1;CS=DEL_union;EAS_AF=0.089;END=36476549;EUR_AF=0.1097;MC=UW_VH_9206;NS=2504;SAS_AF=0.0933;SVTYPE=DEL\tGT\t.\nX\t36512038\tDEL_pindel_53515\tATTTTAAAGTGTACAGGTCAGTAATTTTAAATACATTCACGTTGTTGTACAACAAATCTCTACAACTTCTTT\tA\t.\tPASS\tAC=989;AF=0.261987;AFR_AF=0.2642;AMR_AF=0.2519;AN=3775;CS=DEL_pindel;EAS_AF=0.2421;END=36512109;EUR_AF=0.2493;NS=2504;SAS_AF=0.3008;SVTYPE=DEL\tGT\t1\nX\t36591669\tDUP_gs.X_CNV_X_36591669_36764601\tT\t<CN0>,<CN2>\t.\tPASS\tAC=0,1;AF=0,0.0002649;AFR_AF=0,0;AMR_AF=0,0;AN=3775;CS=DUP_gs;EAS_AF=0,0;END=36764601;EUR_AF=0,0;NS=2504;SAS_AF=0,0.0014;SVTYPE=DUP\tGT\t0\nX\t36644458\tDUP_gs.X_CNV_X_36644458_36650082\tA\t<CN0>,<CN2>\t.\tPASS\tAC=0,4;AF=0,0.0010596;AFR_AF=0,0;AMR_AF=0,0;AN=3775;CS=DUP_gs;EAS_AF=0,0;END=36650082;EUR_AF=0,0.0039;NS=2504;SAS_AF=0,0.0014;SVTYPE=DUP\tGT\t0\nX\t36667849\tYL_CN_JPT_4691\tC\t<CN0>\t100\tPASS\tAC=10;AF=0.00264901;AFR_AF=0.003;AMR_AF=0.0019;AN=2542;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0.0013;END=36737862;EUR_AF=0.0065;NS=2504;SAS_AF=0;SVTYPE=DEL\tGT\t.\nX\t36743043\tDEL_pindel_53520\tATTGCATGGCAAGATGTGTACAGATGGAAGAGGAGGAAGTCAGCCTGTGGCATTACATGGCAAGAGGTGTATAGATGGAAAGTGCAGAAAGGCTATGAGAGGCCACCCAGACTGCTTATGGCTGGAGGATTCATCAAGTCTAGGGGTGGACTTGGCAAGAGATAATGGATGAAGTGTACATCAAGTCTAGAAAAGAACATAGTAGAAAGTGGATAAATGAAGTTTGCAGTGGGCCTAGGGTGGGATCTGGCAGGAAGTTCAGGGGTGGAGTTAACACCCAGTATTAGGTAAGACTTGGGAAATGGGGGAGTAATGGG\tA\t.\tPASS\tAC=1491;AF=0.394967;AFR_AF=0.332;AMR_AF=0.3969;AN=3775;CS=DEL_pindel;EAS_AF=0.3704;END=36743359;EUR_AF=0.4047;NS=2504;SAS_AF=0.4972;SVTYPE=DEL\tGT\t1\nX\t36743057\tDEL_pindel_53521\tTGTGTACAGATGGAAGAGGAGGAAGTCAGCCTGTGGCATTACATGGCAAGAG\tT\t.\tPASS\tAC=1048;AF=0.277616;AFR_AF=0.334;AMR_AF=0.2519;AN=3775;CS=DEL_pindel;EAS_AF=0.2723;END=36743108;EUR_AF=0.2467;NS=2504;SAS_AF=0.2563;SVTYPE=DEL\tGT\t0\nX\t36763991\tDUP_gs.X_CNV_X_36763991_36773403\tA\t<CN0>,<CN2>\t.\tPASS\tAC=0,2;AF=0,0.0005298;AFR_AF=0,0.001;AMR_AF=0,0;AN=3775;CS=DUP_gs;EAS_AF=0,0;END=36773403;EUR_AF=0,0;NS=2504;SAS_AF=0,0.0014;SVTYPE=DUP\tGT\t0\nX\t36907823\tBI_GS_DEL1_B3_P2934_42\tA\t<CN0>\t100\tPASS\tAC=8;AF=0.00238411;AFR_AF=0.002;AMR_AF=0.0019;AN=2542;CIEND=-54,55;CIPOS=-54,55;CS=DEL_union;EAS_AF=0;END=36933646;EUR_AF=0.0065;MC=YL_CN_PJL_5022;NS=2504;SAS_AF=0.0014;SVTYPE=DEL\tGT\t.\nX\t36983092\tBI_GS_DEL1_B3_P2934_46\tT\t<CN0>\t100\tPASS\tAC=8;AF=0.00238411;AFR_AF=0.005;AMR_AF=0.0019;AN=2542;CIEND=-28,28;CIPOS=-28,28;CS=DEL_union;EAS_AF=0;END=36988457;EUR_AF=0.0039;MC=YL_CN_MSL_4013;NS=2504;SAS_AF=0;SVTYPE=DEL\tGT\t.\nX\t37031097\tDUP_gs.X_CNV_X_37031097_37034385\tC\t<CN0>,<CN2>\t.\tPASS\tAC=182,2;AF=0.0482119,0.0005298;AFR_AF=0.1675,0;AMR_AF=0.0267,0;AN=3775;CS=DUP_gs;EAS_AF=0,0;END=37034385;EUR_AF=0,0.0013;MC=YL_CN_LWK_4164,BI_GS_DEL1_B1_P2935_14,UW_VH_7624,YL_CN_ASW_4524;NS=2504;SAS_AF=0,0.0014;SVTYPE=CNV\tGT\t0\nX\t37037673\tDEL_pindel_53526\tGATCTACGTCAGACAATGTGTATGACAACAATGTACTACTCTTCCTATTCCTAACACTTCTGA\tG\t.\tPASS\tAC=371;AF=0.0982781;AFR_AF=0.0518;AMR_AF=0.1031;AN=3775;CS=DEL_pindel;EAS_AF=0.1243;END=37037735;EUR_AF=0.1227;NS=2504;SAS_AF=0.1058;SVTYPE=DEL\tGT\t0\nX\t37066160\tBI_GS_DEL1_B5_P2935_51\tA\t<CN0>\t100\tPASS\tAC=128;AF=0.0659603;AFR_AF=0.1844;AMR_AF=0.0534;AN=2542;CIEND=-1,1;CIPOS=-1,1;CS=DEL_union;EAS_AF=0.0118;END=37067856;EUR_AF=0.0235;MC=UW_VH_7625,UW_VH_17651,YL_CN_PUR_5638,EM_DL_DEL101169514;NS=2504;SAS_AF=0.0125;SVTYPE=DEL\tGT\t.\nX\t37195798\tL1_umary_LINE1_3045\tT\t<INS:ME:LINE1>\t.\tPASS\tAC=11;AF=0.00291391;AFR_AF=0.011;AMR_AF=0;AN=3775;CS=L1_umary;EAS_AF=0;EUR_AF=0;MEINFO=LINE1,1,6019,-;NS=2504;SAS_AF=0;SVLEN=6018;SVTYPE=LINE1;TSD=null\tGT\t0\nX\t37242570\tL1_umary_LINE1_3046\tC\t<INS:ME:LINE1>\t.\tPASS\tAC=59;AF=0.0156291;AFR_AF=0.0558;AMR_AF=0.0057;AN=3775;CS=L1_umary;EAS_AF=0;EUR_AF=0;MEINFO=LINE1,4978,6018,-;NS=2504;SAS_AF=0;SVLEN=1040;SVTYPE=LINE1;TSD=GGATC\tGT\t0\nX\t37291685\tDUP_gs.X_CNV_X_37291685_37316024\tT\t<CN0>,<CN2>\t.\tPASS\tAC=0,2;AF=0,0.0005298;AFR_AF=0,0;AMR_AF=0,0;AN=3775;CS=DUP_gs;EAS_AF=0,0;END=37316024;EUR_AF=0,0;NS=2504;SAS_AF=0,0.0028;SVTYPE=DUP\tGT\t0\nX\t37354638\tDUP_gs.X_CNV_X_37354638_37368276\tA\t<CN0>,<CN2>\t.\tPASS\tAC=34,34;AF=0.00900662,0.00900662;AFR_AF=0,0.0289;AMR_AF=0,0.0076;AN=3775;CS=DUP_gs;EAS_AF=0,0;END=37368276;EUR_AF=0,0;NS=2504;SAS_AF=0.0474,0.0014;SVTYPE=CNV\tGT\t0\nX\t37436552\tL1_umary_LINE1_3047\tA\t<INS:ME:LINE1>\t.\tPASS\tAC=1;AF=0.0002649;AFR_AF=0.001;AMR_AF=0;AN=3775;CS=L1_umary;EAS_AF=0;EUR_AF=0;MEINFO=LINE1,69,5738,+;NS=2504;SAS_AF=0;SVLEN=5669;SVTYPE=LINE1;TSD=null\tGT\t0\nX\t37574091\tBI_GS_DEL1_B5_P2935_443\tA\t<CN0>\t100\tPASS\tAC=7;AF=0.0018543;AFR_AF=0.004;AMR_AF=0;AN=2542;CIEND=-44,44;CIPOS=-44,44;CS=DEL_union;EAS_AF=0;END=37579372;EUR_AF=0.0039;MC=YL_CN_LWK_4167;NS=2504;SAS_AF=0;SVTYPE=DEL\tGT\t.\nX\t37701641\tDEL_pindel_53532\tAATTATATTCTCATTCATACTATGTGATTGTTTAGCTATGAAACAACAACTG\tA\t.\tPASS\tAC=1178;AF=0.312053;AFR_AF=0.323;AMR_AF=0.2939;AN=3775;CS=DEL_pindel;EAS_AF=0.2919;END=37701692;EUR_AF=0.3003;NS=2504;SAS_AF=0.344;SVTYPE=DEL\tGT\t1\nX\t37813162\tDUP_gs.X_CNV_X_37813162_37855992\tC\t<CN0>,<CN2>\t.\tPASS\tAC=0,1;AF=0,0.0002649;AFR_AF=0,0;AMR_AF=0,0;AN=3775;CS=DUP_gs;EAS_AF=0,0.0013;END=37855992;EUR_AF=0,0;NS=2504;SAS_AF=0,0;SVTYPE=DUP\tGT\t0\nX\t37974440\tDEL_pindel_53536\tTAAGATACTTATTTCAGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCTGGGTAACACAGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTGGTAGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCGCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAA\tT\t.\tPASS\tAC=1233;AF=0.326623;AFR_AF=0.35;AMR_AF=0.3244;AN=3775;CS=DEL_pindel;EAS_AF=0.2971;END=37974761;EUR_AF=0.3172;MEINFO=AluYc1,1,281,+;NS=2504;SAS_AF=0.337;SVTYPE=DEL_ALU\tGT\t1\nX\t37986665\tDEL_pindel_53537\tTGATGACCTAAGAGAGCTCTGTTTTAAACATTTATTTTATAAAATGTTCTAAGCCATTAACTAAAAGGAAATGA\tT\t.\tPASS\tAC=498;AF=0.131921;AFR_AF=0.1137;AMR_AF=0.1756;AN=3775;CS=DEL_pindel;EAS_AF=0.0838;END=37986738;EUR_AF=0.1501;NS=2504;SAS_AF=0.1574;SVTYPE=DEL\tGT\t1\nX\t38097551\tL1_umary_LINE1_3048\tG\t<INS:ME:LINE1>\t.\tPASS\tAC=9;AF=0.00238411;AFR_AF=0;AMR_AF=0.0019;AN=3775;CS=L1_umary;EAS_AF=0;EUR_AF=0.0091;MEINFO=LINE1,1,6012,+;NS=2504;SAS_AF=0.0014;SVLEN=6011;SVTYPE=LINE1;TSD=null\tGT\t0\nX\t38386513\tUW_VH_2492\tT\t<CN0>\t100\tPASS\tAC=884;AF=0.370331;AFR_AF=0.7089;AMR_AF=0.2252;AN=2542;CIEND=0,442;CIPOS=-421,0;CS=DEL_union;EAS_AF=0.3442;END=38387335;EUR_AF=0.1501;MC=BI_GS_DEL1_B1_P2936_279,EM_DL_DEL101169802;NS=2504;SAS_AF=0.266;SVTYPE=DEL\tGT\t.\nX\t38485618\tDUP_gs.X_CNV_X_38485618_38584308\tT\t<CN0>,<CN2>\t.\tPASS\tAC=0,2;AF=0,0.0005298;AFR_AF=0,0;AMR_AF=0,0;AN=3775;CS=DUP_gs;EAS_AF=0,0;END=38584308;EUR_AF=0,0.0013;NS=2504;SAS_AF=0,0.0014;SVTYPE=DUP\tGT\t0\nX\t38561080\tL1_umary_LINE1_3049\tT\t<INS:ME:LINE1>\t.\tPASS\tAC=2;AF=0.0005298;AFR_AF=0.002;AMR_AF=0;AN=3775;CS=L1_umary;EAS_AF=0;EUR_AF=0;MEINFO=LINE1,4727,5992,-;NS=2504;SAS_AF=0;SVLEN=1265;SVTYPE=LINE1;TSD=null\tGT\t0\nX\t38584427\tDUP_gs.X_CNV_X_38584427_38588518\tA\t<CN0>,<CN2>\t.\tPASS\tAC=1225,1;AF=0.324503,0.0002649;AFR_AF=0.0209,0.001;AMR_AF=0.479,0;AN=3775;CS=DUP_gs;EAS_AF=0.7317,0;END=38588518;EUR_AF=0.1527,0;MC=UW_VH_2853,BI_GS_DEL1_B1_P2936_405,UW_VH_11022,YL_CN_CDX_3818;NS=2504;SAS_AF=0.3858,0;SVTYPE=CNV\tGT\t0\nX\t38590883\tDUP_gs.X_CNV_X_38590883_38631587\tC\t<CN0>,<CN2>\t.\tPASS\tAC=0,2;AF=0,0.0005298;AFR_AF=0,0;AMR_AF=0,0;AN=3775;CS=DUP_gs;EAS_AF=0,0;END=38631587;EUR_AF=0,0.0013;NS=2504;SAS_AF=0,0.0014;SVTYPE=DUP\tGT\t0\nX\t38752392\tBI_GS_DEL1_B5_P2936_762\tT\t<CN0>\t100\tPASS\tAC=9;AF=0.00344371;AFR_AF=0.007;AMR_AF=0;AN=2542;CIEND=-2,3;CIPOS=-2,3;CS=DEL_union;EAS_AF=0.0026;END=38755014;EUR_AF=0.0039;MC=UW_VH_17421,YL_CN_LWK_4168;NS=2504;SAS_AF=0.0014;SVTYPE=DEL\tGT\t.\nX\t38903559\tBI_GS_DEL1_B2_P2936_525\tT\t<CN0>\t100\tPASS\tAC=53;AF=0.10596;AFR_AF=0.0947;AMR_AF=0.124;AN=2542;CIEND=-10,10;CIPOS=-10,10;CS=DEL_union;EAS_AF=0.0903;END=38904326;EUR_AF=0.1136;NS=2504;SAS_AF=0.117;SVTYPE=DEL\tGT\t.\nX\t38948202\tYL_CN_STU_4578\tA\t<CN0>\t100\tPASS\tAC=6;AF=0.0015894;AFR_AF=0.002;AMR_AF=0;AN=2542;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0.0013;END=38957151;EUR_AF=0.0026;NS=2504;SAS_AF=0.0014;SVTYPE=DEL\tGT\t.\nX\t39002551\tL1_umary_LINE1_3050\tG\t<INS:ME:LINE1>\t.\tPASS\tAC=3;AF=0.0007947;AFR_AF=0;AMR_AF=0;AN=3775;CS=L1_umary;EAS_AF=0.0039;EUR_AF=0;MEINFO=LINE1,1,5998,+;NS=2504;SAS_AF=0;SVLEN=5997;SVTYPE=LINE1;TSD=null\tGT\t0\nX\t39397358\tNUMT_umich_MERGED_NUMT_204\tC\t<INS:MT>\t.\tPASS\tAC=64;AF=0.0169536;AFR_AF=0.0518;AMR_AF=0.0057;AN=3775;CIEND=-3,0;CIPOS=0,3;CS=NUMT_umich;EAS_AF=0.0052;END=39397360;EUR_AF=0.0026;MEND=12282;MLEN=36;MSTART=12247;NS=2504;SAS_AF=0.0042;SVTYPE=INS\tGT\t0\nX\t39642028\tDUP_gs.X_CNV_X_39642028_39654111\tT\t<CN0>,<CN2>\t.\tPASS\tAC=0,2;AF=0,0.0005298;AFR_AF=0,0.001;AMR_AF=0,0.0019;AN=3775;CS=DUP_gs;EAS_AF=0,0;END=39654111;EUR_AF=0,0;NS=2504;SAS_AF=0,0;SVTYPE=DUP\tGT\t0\nX\t39939333\tALU_umary_ALU_12650\tG\t<INS:ME:ALU>\t.\tPASS\tAC=439;AF=0.116291;AFR_AF=0.2014;AMR_AF=0.0363;AN=3775;CS=ALU_umary;EAS_AF=0.1545;EUR_AF=0.0248;MEINFO=AluUndef,1,256,+;NS=2504;SAS_AF=0.1128;SVLEN=255;SVTYPE=ALU;TSD=AAGAAAAGGATGAGGGAAG\tGT\t0\nX\t40092270\tUW_VH_5982\tG\t<CN0>\t100\tPASS\tAC=49;AF=0.0333775;AFR_AF=0.014;AMR_AF=0.0095;AN=2542;CIEND=0,388;CIPOS=-448,0;CS=DEL_union;EAS_AF=0.1073;END=40094867;EUR_AF=0.0157;MC=BI_GS_DEL1_B5_P2938_68,YL_CN_CHS_4714,UW_VH_7390;NS=2504;SAS_AF=0.0181;SVTYPE=DEL\tGT\t.\nX\t40371270\tBI_GS_DEL1_B5_P2938_312\tA\t<CN0>\t100\tPASS\tAC=6;AF=0.0018543;AFR_AF=0.002;AMR_AF=0;AN=2542;CIEND=-9,9;CIPOS=-9,9;CS=DEL_union;EAS_AF=0;END=40375553;EUR_AF=0.0065;MC=YL_CN_TSI_4380;NS=2504;SAS_AF=0;SVTYPE=DEL\tGT\t.\nX\t40459354\tDEL_pindel_53562\tAACTTTTTCTTCTTCCCCAACTGAAACTCTGTACTCCTTAAACACTATGAGATAACTGAAGTAGAACACCC\tA\t.\tPASS\tAC=743;AF=0.196821;AFR_AF=0.1306;AMR_AF=0.2195;AN=3775;CS=DEL_pindel;EAS_AF=0.2343;END=40459424;EUR_AF=0.1945;NS=2504;SAS_AF=0.2354;SVTYPE=DEL\tGT\t1\nX\t40461270\tBI_GS_DEL1_B2_P2938_226\tA\t<CN0>\t100\tPASS\tAC=749;AF=0.450861;AFR_AF=0.6201;AMR_AF=0.4733;AN=2542;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.4385;END=40461776;EUR_AF=0.3003;NS=2504;SAS_AF=0.3719;SVTYPE=DEL\tGT\t.\nX\t40465562\tDEL_pindel_53563\tGCTGTTTTTTAACCCTCTTCTGCAAGTTTGTTGACCTACATGGGCTAATATGGATACTAAAAATACTACATTGATCTAAGAAGAAACTAGCCTTGTGGAGTATATAGATGCTTTTCATTATACACACAAAAATCCCTGAGGGACATTTTGAGGCATGAATATAAAACATTT\tG\t.\tPASS\tAC=677;AF=0.179338;AFR_AF=0.1226;AMR_AF=0.2023;AN=3775;CS=DEL_pindel;EAS_AF=0.199;END=40465732;EUR_AF=0.1854;NS=2504;SAS_AF=0.2145;SVTYPE=DEL\tGT\t1\nX\t40495454\tDEL_pindel_53568\tCAGCATCTTCTTGGCAAAATCTTTTTTGGCAATCCACCTGACCAGCAGAGAATGTCTAG\tC\t.\tPASS\tAC=628;AF=0.166358;AFR_AF=0.1366;AMR_AF=0.1508;AN=3775;CS=DEL_pindel;EAS_AF=0.1597;END=40495512;EUR_AF=0.1815;NS=2504;SAS_AF=0.2103;SVTYPE=DEL\tGT\t1\nX\t40505174\tDEL_pindel_53569\tTTCCTTTCATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGTTCTGTCGCCCAGGCGGGAGTGCAGTGGCGCGATCTCCGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACTGCGCCCGGCTAATTTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTGGTCTCGATCTCCTGACCTCATGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACTGCGCCCGGCCG\tT\t.\tPASS\tAC=2547;AF=0.674702;AFR_AF=0.678;AMR_AF=0.6947;AN=3775;CS=DEL_pindel;EAS_AF=0.6976;END=40505498;EUR_AF=0.6645;MEINFO=AluYa1_1,1,281,-;NS=2504;SAS_AF=0.6421;SVTYPE=DEL_ALU\tGT\t0\nX\t40652511\tALU_umary_ALU_12651\tT\t<INS:ME:ALU>\t.\tPASS\tAC=133;AF=0.0352318;AFR_AF=0.1246;AMR_AF=0.0153;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0;MEINFO=AluYa5,2,281,-;NS=2504;SAS_AF=0;SVLEN=279;SVTYPE=ALU;TSD=AAGGAGACTGTTTTT\tGT\t0\nX\t40682531\tALU_umary_ALU_12652\tT\t<INS:ME:ALU>\t.\tPASS\tAC=48;AF=0.0127152;AFR_AF=0.0469;AMR_AF=0.0019;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0;MEINFO=AluUndef,10,281,+;NS=2504;SAS_AF=0;SVLEN=271;SVTYPE=ALU;TSD=AAAGAAATCAATATACT\tGT\t0\nX\t40932142\tBI_GS_DEL1_B2_P2938_434\tA\t<CN0>\t100\tPASS\tAC=265;AF=0.274702;AFR_AF=0.2622;AMR_AF=0.2615;AN=2542;CIEND=-9,10;CIPOS=-9,10;CS=DEL_union;EAS_AF=0.2827;END=40932816;EUR_AF=0.2258;MC=UW_VH_7626;NS=2504;SAS_AF=0.3454;SVTYPE=DEL\tGT\t.\nX\t41057619\tDEL_pindel_53579\tTTTTGAAGGAAGATCTTTTTATTAGAAAATCTGAGTTTTCTGAGATGTAATGAGATCTTAAATTCC\tT\t.\tPASS\tAC=1625;AF=0.430464;AFR_AF=0.329;AMR_AF=0.4313;AN=3775;CS=DEL_pindel;EAS_AF=0.5157;END=41057684;EUR_AF=0.4047;NS=2504;SAS_AF=0.5084;SVTYPE=DEL\tGT\t1\nX\t41101152\tBI_GS_DEL1_B2_P2939_44\tG\t<CN0>\t100\tPASS\tAC=140;AF=0.176424;AFR_AF=0.1406;AMR_AF=0.1679;AN=2542;CIEND=-57,57;CIPOS=-57,57;CS=DEL_union;EAS_AF=0.2042;END=41102217;EUR_AF=0.1919;NS=2504;SAS_AF=0.1866;SVTYPE=DEL\tGT\t.\nX\t41159879\tBI_GS_DEL1_B3_P2939_7\tG\t<CN0>\t100\tPASS\tAC=18;AF=0.0201325;AFR_AF=0.015;AMR_AF=0.021;AN=2542;CIEND=-29,29;CIPOS=-29,29;CS=DEL_union;EAS_AF=0.017;END=41162350;EUR_AF=0.0261;MC=YL_CN_ITU_4671;NS=2504;SAS_AF=0.0237;SVTYPE=DEL\tGT\t.\nX\t41214287\tBI_GS_DEL1_B1_P2939_111\tT\t<CN0>\t100\tPASS\tAC=36;AF=0.082649;AFR_AF=0.0728;AMR_AF=0.0916;AN=2542;CIEND=-22,22;CIPOS=-22,22;CS=DEL_union;EAS_AF=0.0838;END=41215620;EUR_AF=0.0561;MC=UW_VH_7091;NS=2504;SAS_AF=0.117;SVTYPE=DEL\tGT\t.\nX\t41339020\tDUP_gs.X_CNV_X_41339020_41361501\tC\t<CN0>,<CN2>\t.\tPASS\tAC=0,1;AF=0,0.0002649;AFR_AF=0,0;AMR_AF=0,0;AN=3775;CS=DUP_gs;EAS_AF=0,0.0013;END=41361501;EUR_AF=0,0;NS=2504;SAS_AF=0,0;SVTYPE=DUP\tGT\t0\nX\t41343728\tUW_VH_3171\tT\t<CN0>\t100\tPASS\tAC=38;AF=0.0217218;AFR_AF=0.009;AMR_AF=0.0115;AN=2542;CIEND=0,395;CIPOS=-393,0;CS=DEL_union;EAS_AF=0.0105;END=41345820;EUR_AF=0.0679;MC=UW_VH_3194,YL_CN_CEU_5412,BI_GS_DEL1_B1_P2939_160;NS=2504;SAS_AF=0.0097;SVTYPE=DEL\tGT\t.\nX\t41431520\tDEL_pindel_53588\tAAACTATTCTTTGTGTATGAAGTGCATGTTTTACAAGCAGAACATGATGATTGATACAGTCTGGTATAAATATATATTCTTGCTATTTGACTTCTATTTGTTCCACCTGTTCTGTTATCTTTTTCTGCCTTTCTTTGTATTATTTTTTATTCTGTTTTCTCTCCTGTGTTTTCTCTCACAACTCTTCATTTTGTTGTTTTAGTGGTTGCATTAGGGTTTATAGCATCTATCTTTAACTTGTCAGTGTACCTTCAAGTGATATTATACCACTTCACATATAACCCTTATCCCCCCTACATCATATAAGAGCCTTACAAT\tA\t.\tPASS\tAC=1175;AF=0.311258;AFR_AF=0.3011;AMR_AF=0.3053;AN=3775;CS=DEL_pindel;EAS_AF=0.3115;END=41431837;EUR_AF=0.2924;NS=2504;SAS_AF=0.3496;SVTYPE=DEL\tGT\t1\nX\t41571711\tDEL_pindel_53589\tTTACGATTGAAACTGCCTTTGCAAAACTGTAACTAAGGAAATTATGACAGTGAAAAATATCAGACCTAACCAACTCCATCTTGCTTCTAACCTCTAAACTGTCCTTGTCCATTACTGGGCATAGGCCAAACTAGCCTTGGGAAGGAATTTAATTTATAGTTTAAATAATAGCCCTTCCCAAAAGCTAAACTGTTCTTGTAAAACGAATGAAAGGCCACCAGCCACCAAGTACGGATGAGAGGGGCTGGAATTCTAAATGTTACCAGCCATTATTCTGGAGGTCATAAGATTTGCAACTTACATCACTATCG\tT\t.\tPASS\tAC=945;AF=0.250331;AFR_AF=0.2353;AMR_AF=0.2538;AN=3775;CS=DEL_pindel;EAS_AF=0.2618;END=41572021;EUR_AF=0.2376;NS=2504;SAS_AF=0.2702;SVTYPE=DEL\tGT\t1\nX\t41646759\tDEL_pindel_53591\tTTTTAATAAAAAAAGTACACATTTCTTAATACTTTCCCCAAAAGCAAAAAAAAAAAAAAAAACAAACCACAAATACTTTCCCCAACTCTTCTAATAAAATC\tT\t.\tPASS\tAC=1011;AF=0.267815;AFR_AF=0.2532;AMR_AF=0.271;AN=3775;CS=DEL_pindel;EAS_AF=0.2618;END=41646859;EUR_AF=0.2676;NS=2504;SAS_AF=0.2925;SVTYPE=DEL\tGT\t1\nX\t41866985\tDEL_pindel_53594\tTACAAGGAGGAACTGGTACCATTCCTTCTGAAACTATTCCAATCAATAGAAAAAGAGGGAATCCTCCCTAACTCATTTTATGAGGCCAGCATCATCCTGATACCAAAGCCTGGAAGAGACACAACAAAAAAAGAGAATTTTAGACCAATATCCTTGATGAACGTTGATGCAAAAATCCTCAATAAAATACTGGCAAACCGAATCCAGCAGCACATCAAAAAGCTTATCCACCAAGATCAAGTGGGATTCATCCCTGGTATGCAAGGCTGGTTCAATATATGCAAATCAATAAATGTAATTGAGCATATAAACAGAACCAAAGACAAAAACCACATGATTATCTCAATAGATGCAGAAAAGGCCTTTGACAAAATTCAACAACACTTCATGCTAAAAACTCTCAATAAATTAGGTATTGATGGGACGTATCTCAAAATAATAAGAGCTATCTGTGACAAACCCACAGCCAATATCATACTGAATGGGAAAAAACTGGAAGCATTCCCTTTGAAAACTGGCACAAGACAGGGATGCCCTCTCTCACCACTCCTATTCAACATAGTGTTGGAAGTTCTGGCCAGGGCAATTAG\tT\t.\tPASS\tAC=1054;AF=0.279205;AFR_AF=0.2722;AMR_AF=0.2366;AN=3775;CS=DEL_pindel;EAS_AF=0.2853;END=41867574;EUR_AF=0.2768;NS=2504;SAS_AF=0.3162;SVTYPE=DEL\tGT\t1\nX\t41921397\tDEL_pindel_53596\tATCATATATGCCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCC\tA\t.\tPASS\tAC=1172;AF=0.310464;AFR_AF=0.2991;AMR_AF=0.3053;AN=3775;CS=DEL_pindel;EAS_AF=0.301;END=41921475;EUR_AF=0.3029;NS=2504;SAS_AF=0.3482;SVTYPE=DEL\tGT\t1\nX\t42040893\tDUP_gs.X_CNV_X_42040893_42053063\tG\t<CN0>,<CN2>\t.\tPASS\tAC=0,1;AF=0,0.0002649;AFR_AF=0,0;AMR_AF=0,0;AN=3775;CS=DUP_gs;EAS_AF=0,0;END=42053063;EUR_AF=0,0;NS=2504;SAS_AF=0,0.0014;SVTYPE=DUP\tGT\t0\nX\t42060699\tDUP_gs.X_CNV_X_42060699_42284712\tC\t<CN0>,<CN2>\t.\tPASS\tAC=0,1;AF=0,0.0002649;AFR_AF=0,0;AMR_AF=0,0;AN=3775;CS=DUP_gs;EAS_AF=0,0;END=42284712;EUR_AF=0,0;NS=2504;SAS_AF=0,0.0014;SVTYPE=DUP\tGT\t0\nX\t42165210\tALU_umary_ALU_12653\tT\t<INS:ME:ALU>\t.\tPASS\tAC=63;AF=0.0166887;AFR_AF=0.0578;AMR_AF=0.0095;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0;MEINFO=AluUndef,1,280,-;NS=2504;SAS_AF=0;SVLEN=279;SVTYPE=ALU;TSD=CTGCCTTTTACTTTT\tGT\t0\nX\t42204450\tUW_VH_9479\tA\t<CN0>\t100\tPASS\tAC=18;AF=0.00900662;AFR_AF=0.0209;AMR_AF=0.0076;AN=2542;CIEND=0,171;CIPOS=-202,0;CS=DEL_union;EAS_AF=0.0013;END=42208025;EUR_AF=0.0078;MC=YL_CN_MSL_4016,BI_GS_DEL1_B5_P2940_170;NS=2504;SAS_AF=0.0028;SVTYPE=DEL\tGT\t.\nX\t42512293\tBI_GS_DEL1_B1_P2940_337\tC\t<CN0>\t100\tPASS\tAC=1034;AF=0.433113;AFR_AF=0.5334;AMR_AF=0.4198;AN=2542;CIEND=0,1;CIPOS=0,1;CS=DEL_union;EAS_AF=0.7225;END=42513869;EUR_AF=0.1697;MC=YL_CN_KHV_4998,YL_CN_ESN_4401,UW_VH_2911,YL_CN_LWK_4170,YL_CN_ASW_4532;NS=2504;SAS_AF=0.2758;SVTYPE=DEL\tGT\t.\nX\t42601572\tL1_umary_LINE1_3051\tT\t<INS:ME:LINE1>\t.\tPASS\tAC=1;AF=0.0002649;AFR_AF=0;AMR_AF=0;AN=3775;CS=L1_umary;EAS_AF=0.0013;EUR_AF=0;MEINFO=LINE1,1665,6019,-;NS=2504;SAS_AF=0;SVLEN=4354;SVTYPE=LINE1;TSD=null\tGT\t0\nX\t42747825\tDUP_gs.X_CNV_X_42747825_42760643\tC\t<CN0>,<CN2>\t.\tPASS\tAC=0,2;AF=0,0.0005298;AFR_AF=0,0.001;AMR_AF=0,0;AN=3775;CS=DUP_gs;EAS_AF=0,0;END=42760643;EUR_AF=0,0.0013;NS=2504;SAS_AF=0,0;SVTYPE=DUP\tGT\t0\nX\t42976450\tSVA_umary_SVA_836\tT\t<INS:ME:SVA>\t.\tPASS\tAC=9;AF=0.00238411;AFR_AF=0;AMR_AF=0;AN=3775;CS=SVA_umary;EAS_AF=0;EUR_AF=0;MEINFO=SVA,39,1626,+;NS=2504;SAS_AF=0.0125;SVLEN=1587;SVTYPE=SVA;TSD=null\tGT\t0\nX\t42995315\tBI_GS_DEL1_B2_P2940_518\tT\t<CN0>\t100\tPASS\tAC=10;AF=0.00344371;AFR_AF=0.003;AMR_AF=0.0038;AN=2542;CIEND=-2,3;CIPOS=-2,3;CS=DEL_union;EAS_AF=0;END=43000086;EUR_AF=0.0104;MC=UW_VH_11274,YL_CN_CEU_5413;NS=2504;SAS_AF=0;SVTYPE=DEL\tGT\t.\nX\t43005613\tBI_GS_DEL1_B3_P2941_1\tT\t<CN0>\t100\tPASS\tAC=7;AF=0.00264901;AFR_AF=0.006;AMR_AF=0;AN=2542;CIEND=-4,4;CIPOS=-4,4;CS=DEL_union;EAS_AF=0;END=43016167;EUR_AF=0.0052;MC=YL_CN_GWD_5832;NS=2504;SAS_AF=0;SVTYPE=DEL\tGT\t.\nX\t43010555\tDEL_pindel_53605\tAGAGCAAGACCCTGTCTCAAAAATAAATAAGAGAAAAACAAACAGAAGTATATTCACATATATATTTCATATATACATGGGAGACACCAGGGATTGAGTGGTTCTCAAAGAGGTAGCTTT\tA\t.\tPASS\tAC=1243;AF=0.329272;AFR_AF=0.3529;AMR_AF=0.3092;AN=3775;CS=DEL_pindel;EAS_AF=0.3115;END=43010674;EUR_AF=0.3042;NS=2504;SAS_AF=0.3565;SVTYPE=DEL\tGT\t1\nX\t43017706\tDEL_pindel_53606\tCCTTTATGTCCCCCATAGATTTTGATGATGCTTCTAGTAAAGCATTTATAATATGTTCGTAAGGTGTTTGTATGTTCTATAGTGTTAGATGTAAAAACTCCTTTCGAAAAGAAAGCATGTTTTATTTTATTCTCATCCTTCTAATGCCATGGTTCCCAAACTGTATGCCTAAGTGCCCAAAAGTGCTGCAGAGAAGTCACAAGGGGT\tC\t.\tPASS\tAC=895;AF=0.237086;AFR_AF=0.2173;AMR_AF=0.2252;AN=3775;CS=DEL_pindel;EAS_AF=0.2448;END=43017912;EUR_AF=0.235;NS=2504;SAS_AF=0.2674;SVTYPE=DEL\tGT\t1\nX\t43090191\tALU_umary_ALU_12654\tA\t<INS:ME:ALU>\t.\tPASS\tAC=76;AF=0.0201325;AFR_AF=0.0718;AMR_AF=0.0076;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0;MEINFO=AluYg6,2,281,+;NS=2504;SAS_AF=0;SVLEN=279;SVTYPE=ALU;TSD=AGAAAATGGGCAA\tGT\t0\nX\t43122185\tBI_GS_DEL1_B4_P2941_15\tT\t<CN0>\t100\tPASS\tAC=6;AF=0.00529801;AFR_AF=0.005;AMR_AF=0.0057;AN=2542;CIEND=-17,17;CIPOS=-17,17;CS=DEL_union;EAS_AF=0.0039;END=43125636;EUR_AF=0.0117;NS=2504;SAS_AF=0;SVTYPE=DEL\tGT\t.\nX\t43612929\tDEL_pindel_53610\tAGTACTAACAATAAATGATAGCTTTAAAGAAATAAAGGATCTCTTTGTGGTCTACTATGATTCCTACTTCAAAAATACATCTCAAATTACTTTTCTCCACTAGTAACTCCTCTCTGATTAGTCATCTCTTGCTAAAATGCCCTG\tA\t.\tPASS\tAC=1144;AF=0.303046;AFR_AF=0.2921;AMR_AF=0.3073;AN=3775;CS=DEL_pindel;EAS_AF=0.2893;END=43613072;EUR_AF=0.2977;NS=2504;SAS_AF=0.3357;SVTYPE=DEL\tGT\t1\nX\t43630876\tL1_umary_LINE1_3052\tT\t<INS:ME:LINE1>\t.\tPASS\tAC=4;AF=0.0010596;AFR_AF=0;AMR_AF=0;AN=3775;CS=L1_umary;EAS_AF=0.0052;EUR_AF=0;MEINFO=LINE1,5466,6018,-;NS=2504;SAS_AF=0;SVLEN=552;SVTYPE=LINE1;TSD=null\tGT\t0\nX\t43669193\tDEL_pindel_53611\tTGAAAGCTATTGGAAGGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCAGGAGGCGGAGCTTGCAGTGAGCCGAGATCGCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCTGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAA\tT\t.\tPASS\tAC=1268;AF=0.335894;AFR_AF=0.4167;AMR_AF=0.3053;AN=3775;CS=DEL_pindel;EAS_AF=0.2893;END=43669515;EUR_AF=0.295;MEINFO=AluY,1,281,+;NS=2504;SAS_AF=0.3384;SVTYPE=DEL_ALU\tGT\t1\nX\t43844741\tEM_DL_DEL101171128\tT\t<CN0>\t100\tPASS\tAC=138;AF=0.194437;AFR_AF=0.1725;AMR_AF=0.2023;AN=2542;CIEND=-150,150;CIPOS=-150,150;CS=DEL_union;EAS_AF=0.1597;END=43845580;EUR_AF=0.235;NS=2504;SAS_AF=0.2131;SVTYPE=DEL\tGT\t.\nX\t43886095\tDEL_pindel_53612\tCCATTCTCCTGCCTCAGCCTCCTGAGTAGCTGGGACTACAGGTGCCCACTACCACGCCTGGCTATTTTTTTGTATTTTTAGTAGAGATGGGGTTTCACTGTGTTAGCCAGGATGGTCT\tC\t.\tPASS\tAC=1186;AF=0.314172;AFR_AF=0.3031;AMR_AF=0.3111;AN=3775;CS=DEL_pindel;EAS_AF=0.2984;END=43886212;EUR_AF=0.3146;NS=2504;SAS_AF=0.3482;SVTYPE=DEL\tGT\t1\nX\t43944831\tL1_umary_LINE1_3053\tT\t<INS:ME:LINE1>\t.\tPASS\tAC=142;AF=0.0376159;AFR_AF=0.1366;AMR_AF=0.0095;AN=3775;CS=L1_umary;EAS_AF=0;EUR_AF=0;MEINFO=LINE1,5543,5765,-;NS=2504;SAS_AF=0;SVLEN=222;SVTYPE=LINE1;TSD=null\tGT\t0\nX\t43944831\tUW_VH_12698\tT\t<CN0>\t100\tPASS\tAC=120;AF=0.0553642;AFR_AF=0.1864;AMR_AF=0.0153;AN=2542;CIEND=0,187;CIPOS=-176,0;CS=DEL_union;EAS_AF=0.0039;END=43947288;EUR_AF=0.0104;MC=YL_CN_YRI_5540,BI_GS_DEL1_B4_P2941_129;NS=2504;SAS_AF=0.0042;SVTYPE=DEL\tGT\t.\nX\t44058433\tDUP_gs.X_CNV_X_44058433_44062832\tT\t<CN0>,<CN2>\t.\tPASS\tAC=1,1;AF=0.0002649,0.0002649;AFR_AF=0,0;AMR_AF=0,0;AN=3775;CS=DUP_gs;EAS_AF=0,0;END=44062832;EUR_AF=0.0013,0;NS=2504;SAS_AF=0,0.0014;SVTYPE=CNV\tGT\t0\nX\t44059561\tBI_GS_DEL1_B2_P2942_31\tC\t<CN0>\t100\tPASS\tAC=9;AF=0.00397351;AFR_AF=0.005;AMR_AF=0;AN=2542;CIEND=-25,25;CIPOS=-25,25;CS=DEL_union;EAS_AF=0;END=44062635;EUR_AF=0.0104;NS=2504;SAS_AF=0.0028;SVTYPE=DEL\tGT\t.\nX\t44064123\tALU_umary_ALU_12655\tG\t<INS:ME:ALU>\t.\tPASS\tAC=1;AF=0.0002649;AFR_AF=0;AMR_AF=0;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0.0013;MEINFO=AluUndef,11,281,+;NS=2504;SAS_AF=0;SVLEN=270;SVTYPE=ALU;TSD=null\tGT\t0\nX\t44331448\tDEL_pindel_53617\tGTAATCCCAGCTACTCAGGAGGCTGAGGCAGGAGAATAACTTGAACCCAGGAGGCAGAGGTTGCAGCGAGCCAAGATCATGCCACTGCACTCCAGCCTGGGAGACAGAGCGAGACTCAGTTTCAAAAATTAAT\tG\t.\tPASS\tAC=1002;AF=0.26543;AFR_AF=0.2493;AMR_AF=0.2767;AN=3775;CS=DEL_pindel;EAS_AF=0.2539;END=44331580;EUR_AF=0.2598;NS=2504;SAS_AF=0.2981;SVTYPE=DEL\tGT\t1\nX\t44336413\tUW_VH_6035\tG\t<CN0>\t100\tPASS\tAC=11;AF=0.00291391;AFR_AF=0.003;AMR_AF=0.0019;AN=2542;CIEND=0,207;CIPOS=-252,0;CS=DEL_union;EAS_AF=0.0026;END=44341767;EUR_AF=0.0065;NS=2504;SAS_AF=0;SVTYPE=DEL\tGT\t.\nX\t44365819\tDUP_gs.X_CNV_X_44365819_44384141\tA\t<CN0>,<CN2>\t.\tPASS\tAC=3,2;AF=0.0007947,0.0005298;AFR_AF=0.003,0;AMR_AF=0,0.0019;AN=3775;CS=DUP_gs;EAS_AF=0,0.0013;END=44384141;EUR_AF=0,0;NS=2504;SAS_AF=0,0;SVTYPE=CNV\tGT\t0\nX\t44379815\tBI_GS_DEL1_B3_P2942_12\tT\t<CN0>\t100\tPASS\tAC=46;AF=0.0535099;AFR_AF=0.0359;AMR_AF=0.0477;AN=2542;CIEND=-3,4;CIPOS=-3,4;CS=DEL_union;EAS_AF=0.0353;END=44381379;EUR_AF=0.0692;MC=UW_VH_7697;NS=2504;SAS_AF=0.085;SVTYPE=DEL\tGT\t.\nX\t44388485\tDUP_gs.X_CNV_X_44388485_44419630\tA\t<CN0>,<CN2>\t.\tPASS\tAC=1,2;AF=0.0002649,0.0005298;AFR_AF=0,0;AMR_AF=0,0.0019;AN=3775;CS=DUP_gs;EAS_AF=0.0013,0.0013;END=44419630;EUR_AF=0,0;NS=2504;SAS_AF=0,0;SVTYPE=CNV\tGT\t0\nX\t44392587\tYL_CN_CHB_4645\tT\t<CN0>\t100\tPASS\tAC=10;AF=0.00264901;AFR_AF=0.003;AMR_AF=0.0019;AN=2542;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0.0013;END=44427391;EUR_AF=0.0065;MC=BI_GS_DEL1_B4_P2942_53;NS=2504;SAS_AF=0;SVTYPE=DEL\tGT\t.\nX\t44427162\tBI_GS_DEL1_B3_P2942_15\tC\t<CN0>\t100\tPASS\tAC=150;AF=0.218013;AFR_AF=0.2034;AMR_AF=0.2195;AN=2542;CIEND=-54,55;CIPOS=-54,55;CS=DEL_union;EAS_AF=0.2369;END=44428047;EUR_AF=0.2232;NS=2504;SAS_AF=0.2117;SVTYPE=DEL\tGT\t.\nX\t44429385\tDUP_gs.X_CNV_X_44429385_44446520\tC\t<CN0>,<CN2>\t.\tPASS\tAC=0,5;AF=0,0.0013245;AFR_AF=0,0.003;AMR_AF=0,0.0019;AN=3775;CS=DUP_gs;EAS_AF=0,0.0013;END=44446520;EUR_AF=0,0;NS=2504;SAS_AF=0,0;SVTYPE=DUP\tGT\t0\nX\t44435597\tBI_GS_DEL1_B3_P2942_16\tC\t<CN0>\t100\tPASS\tAC=17;AF=0.0124503;AFR_AF=0.0209;AMR_AF=0.0076;AN=2542;CIEND=-40,40;CIPOS=-40,40;CS=DEL_union;EAS_AF=0.0105;END=44437774;EUR_AF=0.0131;MC=YL_CN_GWD_5835;NS=2504;SAS_AF=0.0056;SVTYPE=DEL\tGT\t.\nX\t44475667\tBI_GS_DEL1_B4_P2942_58\tC\t<CN0>\t100\tPASS\tAC=6;AF=0.00900662;AFR_AF=0.005;AMR_AF=0.0115;AN=2542;CIEND=-68,68;CIPOS=-68,68;CS=DEL_union;EAS_AF=0.0131;END=44479908;EUR_AF=0.0117;MC=YL_CN_CHB_4646;NS=2504;SAS_AF=0.0056;SVTYPE=DEL\tGT\t.\nX\t44479867\tYL_CN_ASW_4537\tC\t<CN0>\t100\tPASS\tAC=4;AF=0.0108609;AFR_AF=0.013;AMR_AF=0.0038;AN=2542;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0.0157;END=44486656;EUR_AF=0.0104;NS=2504;SAS_AF=0.0084;SVTYPE=DEL\tGT\t.\nX\t44497023\tDUP_gs.X_CNV_X_44497023_44511860\tA\t<CN0>,<CN2>\t.\tPASS\tAC=0,2;AF=0,0.0005298;AFR_AF=0,0;AMR_AF=0,0.0019;AN=3775;CS=DUP_gs;EAS_AF=0,0.0013;END=44511860;EUR_AF=0,0;NS=2504;SAS_AF=0,0;SVTYPE=DUP\tGT\t0\nX\t44519535\tBI_GS_DEL1_B1_P2942_265\tG\t<CN0>\t100\tPASS\tAC=12;AF=0.00529801;AFR_AF=0.003;AMR_AF=0;AN=2542;CIEND=-38,38;CIPOS=-38,38;CS=DEL_union;EAS_AF=0.0209;END=44526696;EUR_AF=0;MC=UW_VH_6469,YL_CN_CHB_4647;NS=2504;SAS_AF=0.0014;SVTYPE=DEL\tGT\t.\nX\t44522080\tDUP_gs.X_CNV_X_44522080_44526656\tA\t<CN0>,<CN2>\t.\tPASS\tAC=16,3;AF=0.00423841,0.0007947;AFR_AF=0,0.001;AMR_AF=0,0.0019;AN=3775;CS=DUP_gs;EAS_AF=0.0209,0.0013;END=44526656;EUR_AF=0,0;NS=2504;SAS_AF=0,0;SVTYPE=CNV\tGT\t0\nX\t44561503\tALU_umary_ALU_12656\tT\t<INS:ME:ALU>\t.\tPASS\tAC=3;AF=0.0007947;AFR_AF=0;AMR_AF=0;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0.0039;MEINFO=AluUndef,23,281,-;NS=2504;SAS_AF=0;SVLEN=258;SVTYPE=ALU;TSD=TCCACTTTTT\tGT\t0\nX\t44564146\tDUP_gs.X_CNV_X_44564146_44574565\tG\t<CN0>,<CN2>\t.\tPASS\tAC=0,2;AF=0,0.0005298;AFR_AF=0,0;AMR_AF=0,0.0019;AN=3775;CS=DUP_gs;EAS_AF=0,0.0013;END=44574565;EUR_AF=0,0;NS=2504;SAS_AF=0,0;SVTYPE=DUP\tGT\t0\nX\t44578565\tSVA_umary_SVA_837\tC\t<INS:ME:SVA>\t.\tPASS\tAC=174;AF=0.0460927;AFR_AF=0.0808;AMR_AF=0.0191;AN=3775;CS=SVA_umary;EAS_AF=0;EUR_AF=0.0405;MEINFO=SVA,317,1627,+;NS=2504;SAS_AF=0.0724;SVLEN=1310;SVTYPE=SVA;TSD=AACATCCATCACC\tGT\t0\nX\t44611708\tUW_VH_13837\tC\t<CN0>\t100\tPASS\tAC=53;AF=0.085298;AFR_AF=0.0887;AMR_AF=0.0859;AN=2542;CIEND=0,195;CIPOS=-320,0;CS=DEL_union;EAS_AF=0.1139;END=44613745;EUR_AF=0.0679;NS=2504;SAS_AF=0.0682;SVTYPE=DEL\tGT\t.\nX\t44642003\tDUP_gs.X_CNV_X_44642003_44647911\tG\t<CN0>,<CN2>\t.\tPASS\tAC=0,1;AF=0,0.0002649;AFR_AF=0,0;AMR_AF=0,0.0019;AN=3775;CS=DUP_gs;EAS_AF=0,0;END=44647911;EUR_AF=0,0;NS=2504;SAS_AF=0,0;SVTYPE=DUP\tGT\t0\nX\t44715417\tBI_GS_DEL1_B5_P2942_462\tA\t<CN0>\t100\tPASS\tAC=110;AF=0.14596;AFR_AF=0.1456;AMR_AF=0.1126;AN=2542;CIEND=-9,10;CIPOS=-9,10;CS=DEL_union;EAS_AF=0.1675;END=44718330;EUR_AF=0.1149;MC=YL_CN_PJL_5027,YL_CN_ITU_4675;NS=2504;SAS_AF=0.1811;SVTYPE=DEL\tGT\t.\nX\t44724299\tBI_GS_DEL1_B2_P2942_233\tG\t<CN0>\t100\tPASS\tAC=18;AF=0.0656954;AFR_AF=0.0718;AMR_AF=0.0477;AN=2542;CIEND=-58,58;CIPOS=-58,58;CS=DEL_union;EAS_AF=0.0746;END=44726062;EUR_AF=0.0431;NS=2504;SAS_AF=0.085;SVTYPE=DEL\tGT\t.\nX\t44908140\tALU_umary_ALU_12657\tT\t<INS:ME:ALU>\t.\tPASS\tAC=109;AF=0.0288742;AFR_AF=0.0987;AMR_AF=0.0191;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0;MEINFO=AluUndef,1,281,-;NS=2504;SAS_AF=0;SVLEN=280;SVTYPE=ALU;TSD=CTCAAGTTACTTTTTT\tGT\t0\nX\t45016247\tBI_GS_DEL1_B5_P2943_15\tC\t<CN0>\t100\tPASS\tAC=53;AF=0.11894;AFR_AF=0.1087;AMR_AF=0.1183;AN=2542;CIEND=-8,9;CIPOS=-8,9;CS=DEL_union;EAS_AF=0.1086;END=45017614;EUR_AF=0.154;NS=2504;SAS_AF=0.1072;SVTYPE=DEL\tGT\t.\nX\t45185289\tUW_VH_14974\tG\t<CN0>\t100\tPASS\tAC=10;AF=0.00264901;AFR_AF=0.003;AMR_AF=0.0019;AN=2542;CIEND=0,124;CIPOS=-112,0;CS=DEL_union;EAS_AF=0;END=45205582;EUR_AF=0.0065;NS=2504;SAS_AF=0.0014;SVTYPE=DEL\tGT\t.\nX\t45208735\tBI_GS_DEL1_B2_P2943_117\tG\t<CN0>\t100\tPASS\tAC=8;AF=0.00238411;AFR_AF=0.002;AMR_AF=0.0019;AN=2542;CIEND=-43,44;CIPOS=-43,44;CS=DEL_union;EAS_AF=0.0013;END=45214687;EUR_AF=0.0065;MC=YL_CN_CDX_3826;NS=2504;SAS_AF=0;SVTYPE=DEL\tGT\t.\nX\t45289029\tBI_GS_DEL1_B5_P2943_246\tT\t<CN0>\t100\tPASS\tAC=5;AF=0.00264901;AFR_AF=0.003;AMR_AF=0.0019;AN=2542;CIEND=-13,13;CIPOS=-13,13;CS=DEL_union;EAS_AF=0.0013;END=45292881;EUR_AF=0.0052;MC=UW_VH_22079;NS=2504;SAS_AF=0.0014;SVTYPE=DEL\tGT\t.\nX\t45318884\tALU_umary_ALU_12658\tT\t<INS:ME:ALU>\t.\tPASS\tAC=278;AF=0.0736424;AFR_AF=0.0339;AMR_AF=0.0725;AN=3775;CS=ALU_umary;EAS_AF=0.0026;EUR_AF=0.1697;MEINFO=AluYa5a1,1,281,-;NS=2504;SAS_AF=0.1031;SVLEN=280;SVTYPE=ALU;TSD=AATGTTGGATTTT\tGT\t0\nX\t45423273\tBI_GS_DEL1_B4_P2943_75\tG\t<CN0>\t100\tPASS\tAC=119;AF=0.163709;AFR_AF=0.1555;AMR_AF=0.1603;AN=2542;CIEND=-38,38;CIPOS=-38,38;CS=DEL_union;EAS_AF=0.1361;END=45423945;EUR_AF=0.1945;NS=2504;SAS_AF=0.1741;SVTYPE=DEL\tGT\t.\nX\t45789392\tL1_umary_LINE1_3054\tT\t<INS:ME:LINE1>\t.\tPASS\tAC=2;AF=0.0005298;AFR_AF=0;AMR_AF=0;AN=3775;CS=L1_umary;EAS_AF=0;EUR_AF=0.0026;MEINFO=LINE1,3561,5973,-;NS=2504;SAS_AF=0;SVLEN=2412;SVTYPE=LINE1;TSD=null\tGT\t0\nX\t45817059\tALU_umary_ALU_12659\tT\t<INS:ME:ALU>\t.\tPASS\tAC=1;AF=0.0002649;AFR_AF=0.001;AMR_AF=0;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0;MEINFO=AluUndef,10,267,-;NS=2504;SAS_AF=0;SVLEN=257;SVTYPE=ALU;TSD=null\tGT\t0\nX\t45856436\tDEL_pindel_53627\tGCTCATTATGAATATTTTTGAGTACCCAGCATAATACGAAGGAAAAAACCCATCATCTGTAATTCCACAACTCCAAAATAATCATTGTTAGCAGATCACCAAATTGGGATCCTACTGTAAATCTTACTTTTTAATTGAATTGTTATTGAGATATTAATTGATTCATATGCAGTTGTAAGAAAAAATACAACAATCGTTGTGTACTTTATTCAGTCTCATCCAATGGTAATATTTTGCAAAACAAAGCATAATAACACAAGCAGGATATTGACGTTGATACAATGTGGTAAACTGATTCAATTTTCTCCACTTCTGGTACCCATTTGTGTGTGTGCGTGTGTGTTTCTATGTATTAGAAACATGAATTAATATTAGTACTACATTCTATACAATTATATCATCTATGTAGTTTCATGTATCCACCACCACTGTCAAGATACAGAACAATCCCAACACTATAAGTATCTCTCATGTTATCCTTTTATAACCACACTCACTTTCCTCCTCTCCTTCAATATCTCCAGCCTCTGGTAATTACTAATCTGTTCTTCATTTCTAAAATGTTGTCATTTCAAAAAGGTATATAAATGGATTTATATAGTTTGTAACCTTTTGAGATTAACCTTTTTTACTCAGCATAATTTCCTGGAGATTCATTAGTGTAGTTATATGTATCAATAGTTCTTTACTTTTTATTGCTGAGTAGTAGTCCATGGTATGGATATACCATGGTTTGTTTAACCATTCACCTGTTGAAAGACATATGGGCTGGTTCCAGTTTTGGGCTATTATGAATAAAGCTGCTATGAACATTTGTATACAGGTTTTTGTGTGAATATAAGTTGTCATTTATTTA\tG\t.\tPASS\tAC=104;AF=0.0275497;AFR_AF=0.005;AMR_AF=0.0324;AN=3775;CS=DEL_pindel;EAS_AF=0.0733;END=45857291;EUR_AF=0.0039;NS=2504;SAS_AF=0.032;SVTYPE=DEL\tGT\t0\nX\t46347170\tNUMT_umich_MERGED_NUMT_205\tC\t<INS:MT>\t.\tPASS\tAC=8;AF=0.00211921;AFR_AF=0;AMR_AF=0.0019;AN=3775;CIEND=-4,0;CIPOS=0,4;CS=NUMT_umich;EAS_AF=0.0065;END=46347173;EUR_AF=0.0013;MEND=1184;MLEN=202;MSTART=983;NS=2504;SAS_AF=0.0014;SVTYPE=INS\tGT\t0\nX\t46355358\tUW_VH_18507\tC\t<CN0>\t100\tPASS\tAC=23;AF=0.0468874;AFR_AF=0.0379;AMR_AF=0.0649;AN=2542;CIEND=0,118;CIPOS=-223,0;CS=DEL_union;EAS_AF=0.0497;END=46356852;EUR_AF=0.0483;MC=BI_GS_DEL1_B4_P2944_57;NS=2504;SAS_AF=0.0418;SVTYPE=DEL\tGT\t.\nX\t46414700\tL1_umary_LINE1_3055\tT\t<INS:ME:LINE1>\t.\tPASS\tAC=1;AF=0.0002649;AFR_AF=0;AMR_AF=0;AN=3775;CS=L1_umary;EAS_AF=0;EUR_AF=0.0013;MEINFO=LINE1,4522,5998,+;NS=2504;SAS_AF=0;SVLEN=1476;SVTYPE=LINE1;TSD=null\tGT\t0\nX\t46661728\tDEL_pindel_53633\tTTCCTAGCTTGGTACTCCACTGAGTCCATTTTTTTCCTACTGATTCAATTATTATGTATCAATTTCCATTCCTGGGTTTCCTC\tT\t.\tPASS\tAC=113;AF=0.0299338;AFR_AF=0.0189;AMR_AF=0.0649;AN=3775;CS=DEL_pindel;EAS_AF=0.0445;END=46661810;EUR_AF=0.0131;NS=2504;SAS_AF=0.0223;SVTYPE=DEL\tGT\t1\nX\t46707327\tDEL_pindel_53636\tGTATATACATATATATGGACTCATATATGTGTATATACATATATATATATA\tG\t.\tPASS\tAC=975;AF=0.258278;AFR_AF=0.2702;AMR_AF=0.2385;AN=3775;CS=DEL_pindel;EAS_AF=0.2421;END=46707377;EUR_AF=0.235;NS=2504;SAS_AF=0.2981;SVTYPE=DEL\tGT\t1\nX\t46794577\tUW_VH_12963\tC\t<CN0>\t100\tPASS\tAC=95;AF=0.112318;AFR_AF=0.1356;AMR_AF=0.1126;AN=2542;CIEND=0,340;CIPOS=-420,0;CS=DEL_union;EAS_AF=0.1034;END=46795620;EUR_AF=0.0901;MC=BI_GS_DEL1_B3_P2944_17,EM_DL_DEL101172042;NS=2504;SAS_AF=0.1128;SVTYPE=DEL\tGT\t.\nX\t47093162\tDEL_pindel_53641\tCTGAGGGGCGTGCTCTGAGGCCGAGGGACGACAGTGGAGGGGAGGTGGTGCCTA\tC\t.\tPASS\tAC=2054;AF=0.544106;AFR_AF=0.3679;AMR_AF=0.5821;AN=3775;CS=DEL_pindel;EAS_AF=0.6584;END=47093215;EUR_AF=0.671;NS=2504;SAS_AF=0.5056;SVTYPE=DEL\tGT\t1\nX\t47117440\tYL_CN_TSI_4382\tA\t<CN0>\t100\tPASS\tAC=7;AF=0.0018543;AFR_AF=0.002;AMR_AF=0;AN=2542;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0;END=47154304;EUR_AF=0.0065;NS=2504;SAS_AF=0;SVTYPE=DEL\tGT\t.\nX\t47183859\tSVA_umary_SVA_838\tT\t<INS:ME:SVA>\t.\tPASS\tAC=258;AF=0.0683444;AFR_AF=0.0917;AMR_AF=0.0344;AN=3775;CS=SVA_umary;EAS_AF=0.0052;EUR_AF=0.0757;MEINFO=SVA,1487,1627,-;NS=2504;SAS_AF=0.1198;SVLEN=140;SVTYPE=SVA;TSD=GACAGGGACAACTCTT\tGT\t0\nX\t47218338\tDUP_gs.X_CNV_X_47218338_47224549\tT\t<CN0>,<CN2>\t.\tPASS\tAC=0,1;AF=0,0.0002649;AFR_AF=0,0.001;AMR_AF=0,0;AN=3775;CS=DUP_gs;EAS_AF=0,0;END=47224549;EUR_AF=0,0;NS=2504;SAS_AF=0,0;SVTYPE=DUP\tGT\t0\nX\t47329162\tUW_VH_5014\tG\t<CN0>\t100\tPASS\tAC=12;AF=0.00370861;AFR_AF=0.002;AMR_AF=0.0038;AN=2542;CIEND=0,282;CIPOS=-320,0;CS=DEL_union;EAS_AF=0;END=47335634;EUR_AF=0.0117;MC=BI_GS_DEL1_B1_P2945_138,YL_CN_FIN_4294;NS=2504;SAS_AF=0.0014;SVTYPE=DEL\tGT\t.\nX\t47353120\tUW_VH_24659\tT\t<CN0>\t100\tPASS\tAC=205;AF=0.215894;AFR_AF=0.2223;AMR_AF=0.2271;AN=2542;CIEND=0,149;CIPOS=-181,0;CS=DEL_union;EAS_AF=0.1675;END=47353759;EUR_AF=0.1919;MC=BI_GS_DEL1_B5_P2945_185;NS=2504;SAS_AF=0.2758;SVTYPE=DEL\tGT\t.\nX\t47366180\tBI_GS_DEL1_B5_P2945_200\tA\t<CN0>\t100\tPASS\tAC=7;AF=0.00211921;AFR_AF=0.002;AMR_AF=0;AN=2542;CIEND=-19,19;CIPOS=-19,19;CS=DEL_union;EAS_AF=0;END=47381717;EUR_AF=0.0065;MC=YL_CN_PJL_5029;NS=2504;SAS_AF=0.0014;SVTYPE=DEL\tGT\t.\nX\t47401622\tYL_CN_GWD_5837\tC\t<CN0>\t100\tPASS\tAC=10;AF=0.00291391;AFR_AF=0.007;AMR_AF=0.0019;AN=2542;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0;END=47410370;EUR_AF=0.0039;NS=2504;SAS_AF=0;SVTYPE=DEL\tGT\t.\nX\t47708097\tALU_umary_ALU_12660\tT\t<INS:ME:ALU>\t.\tPASS\tAC=53;AF=0.0140397;AFR_AF=0;AMR_AF=0.021;AN=3775;CS=ALU_umary;EAS_AF=0.0445;EUR_AF=0;MEINFO=AluYg6a2,12,281,-;NS=2504;SAS_AF=0.0111;SVLEN=269;SVTYPE=ALU;TSD=CAAAATCCAAAACTTTTT\tGT\t0\nX\t47771488\tALU_umary_ALU_12661\tT\t<INS:ME:ALU>\t.\tPASS\tAC=168;AF=0.0445033;AFR_AF=0.1565;AMR_AF=0.0191;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0.0013;MEINFO=AluUndef,3,280,-;NS=2504;SAS_AF=0;SVLEN=277;SVTYPE=ALU;TSD=null\tGT\t0\nX\t47829457\tBI_GS_DEL1_B1_P2945_437\tT\t<CN0>\t100\tPASS\tAC=10;AF=0.0323179;AFR_AF=0.0269;AMR_AF=0.0382;AN=2542;CIEND=-1,1;CIPOS=-1,1;CS=DEL_union;EAS_AF=0.0223;END=47834256;EUR_AF=0.0261;MC=UW_VH_4323,YL_CN_CLM_3837;NS=2504;SAS_AF=0.0529;SVTYPE=DEL\tGT\t.\nX\t47862951\tDUP_gs.X_CNV_X_47862951_48003688\tG\t<CN0>,<CN2>\t.\tPASS\tAC=25,57;AF=0.00662252,0.0150993;AFR_AF=0.015,0.0379;AMR_AF=0.0019,0.0038;AN=3775;CS=DUP_gs;EAS_AF=0.0065,0.0105;END=48003688;EUR_AF=0.0052,0.0065;NS=2504;SAS_AF=0,0.0056;SVTYPE=CNV\tGT\t0\nX\t47999721\tDUP_gs.X_CNV_X_47999721_48056440\tC\t<CN0>,<CN2>\t.\tPASS\tAC=1,1;AF=0.0002649,0.0002649;AFR_AF=0,0;AMR_AF=0,0;AN=3775;CS=DUP_gs;EAS_AF=0.0013,0;END=48056440;EUR_AF=0,0.0013;NS=2504;SAS_AF=0,0;SVTYPE=CNV\tGT\t0\nX\t48047631\tDUP_gs.X_CNV_X_48047631_48086232\tA\t<CN0>,<CN2>\t.\tPASS\tAC=1,2;AF=0.0002649,0.0005298;AFR_AF=0,0.001;AMR_AF=0,0;AN=3775;CS=DUP_gs;EAS_AF=0.0013,0;END=48086232;EUR_AF=0,0.0013;NS=2504;SAS_AF=0,0;SVTYPE=CNV\tGT\t0\nX\t48061368\tDEL_pindel_53651\tCCAAGGCTATAAACAATTAATCTGACATAGGATGTAAAAATTAAAGTATCATGTAAGTCAAAAGACACCATAAACAACTATTTAAAAAGGCAAATTTTAGGCCAGGCGCGGGGGCTCACGCCTGTAATCCCAGCACTTTAGGGGGCTAAGGAGGGCAGATCACAAAGTCAGGAGATCAACACCATCCT\tC\t.\tPASS\tAC=962;AF=0.254834;AFR_AF=0.2453;AMR_AF=0.2653;AN=3775;CS=DEL_pindel;EAS_AF=0.2513;END=48061555;EUR_AF=0.2389;NS=2504;SAS_AF=0.2813;SVTYPE=DEL\tGT\t1\nX\t48116282\tDUP_gs.X_CNV_X_48116282_48165949\tT\t<CN0>,<CN2>\t.\tPASS\tAC=0,4;AF=0,0.0010596;AFR_AF=0,0.001;AMR_AF=0,0;AN=3775;CS=DUP_gs;EAS_AF=0,0;END=48165949;EUR_AF=0,0.0013;NS=2504;SAS_AF=0,0.0028;SVTYPE=DUP\tGT\t0\nX\t48125593\tDEL_pindel_53652\tTGTGAAAAACTGGATAAAGAAGGCCCATGGGCACTTGGGAGGGAGGAGGCATCTCCTTTTTTTGAGAAAACAGAGCCTAACACTCTTCAACGTACCCAACCCTCATCTTCCAACTCTTCTCCATCATAGGACCCAAAAGGGGGAAACATGCCTGGA\tT\t.\tPASS\tAC=134;AF=0.0354967;AFR_AF=0.0169;AMR_AF=0.0496;AN=3775;CS=DEL_pindel;EAS_AF=0.0406;END=48125748;EUR_AF=0.0444;NS=2504;SAS_AF=0.0362;SVTYPE=DEL\tGT\t0\nX\t48127600\tDEL_pindel_53653\tGGGTCTCACCACCCAAGGGCCTGGGGGCTGGGGTGGGGACGATGATTTGGGAATGGGACAGTTCTTTCTCACAGGTACCAATGCACGGTGCAGAGGGGAAACAGTTGTGGGGAAGGGAAGGGCAGAGGGGAGTCTATTTTAGCACAAAGCATTGTGTGTGAAT\tG\t.\tPASS\tAC=1940;AF=0.513907;AFR_AF=0.4855;AMR_AF=0.5305;AN=3775;CS=DEL_pindel;EAS_AF=0.5039;END=48127762;EUR_AF=0.5653;NS=2504;SAS_AF=0.4972;SVTYPE=DEL\tGT\t1\nX\t48169696\tDUP_gs.X_CNV_X_48169696_48215049\tC\t<CN0>,<CN2>\t.\tPASS\tAC=0,3;AF=0,0.0007947;AFR_AF=0,0;AMR_AF=0,0;AN=3775;CS=DUP_gs;EAS_AF=0,0;END=48215049;EUR_AF=0,0.0013;NS=2504;SAS_AF=0,0.0028;SVTYPE=DUP\tGT\t0\nX\t48449189\tDEL_pindel_53657\tTCAAGCAAAGCGAGGGCGGGATGACAAAGTACTTGTTAGGAATCCACACTAGATGAGCTCACAAAAAGTAACTTGACAGTTGGTGTTAGTGTTGTGGTTAAGAACAGGGATTCGGAGCCAAGTGGCCTA\tT\t.\tPASS\tAC=586;AF=0.155232;AFR_AF=0.0967;AMR_AF=0.187;AN=3775;CS=DEL_pindel;EAS_AF=0.1597;END=48449317;EUR_AF=0.1645;NS=2504;SAS_AF=0.1992;SVTYPE=DEL\tGT\t1\nX\t48500496\tBI_GS_DEL1_B5_P2946_260\tG\t<CN0>\t100\tPASS\tAC=343;AF=0.177219;AFR_AF=0.4586;AMR_AF=0.1145;AN=2542;CIEND=0,1;CIPOS=0,1;CS=DEL_union;EAS_AF=0.0576;END=48502929;EUR_AF=0.0418;MC=UW_VH_17607,UW_VH_7000,YL_CN_LWK_4174;NS=2504;SAS_AF=0.1017;SVTYPE=DEL\tGT\t.\nX\t48623509\tBI_GS_DEL1_B5_P2946_338\tA\t<CN0>\t100\tPASS\tAC=3;AF=0.00211921;AFR_AF=0.004;AMR_AF=0;AN=2542;CIEND=-5,6;CIPOS=-5,6;CS=DEL_union;EAS_AF=0.0026;END=48626754;EUR_AF=0;NS=2504;SAS_AF=0.0028;SVTYPE=DEL\tGT\t.\nX\t48724413\tYL_CN_PJL_5033\tC\t<CN0>\t100\tPASS\tAC=4;AF=0.0013245;AFR_AF=0.002;AMR_AF=0;AN=2542;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0;END=48743697;EUR_AF=0.0026;MC=BI_GS_DEL1_B2_P2946_264;NS=2504;SAS_AF=0.0014;SVTYPE=DEL\tGT\t.\nX\t48945168\tBI_GS_DEL1_B4_P2946_95\tG\t<CN0>\t100\tPASS\tAC=7;AF=0.0119205;AFR_AF=0.013;AMR_AF=0.0057;AN=2542;CIEND=-54,55;CIPOS=-54,55;CS=DEL_union;EAS_AF=0.0196;END=48948889;EUR_AF=0.0052;MC=YL_CN_STU_4586;NS=2504;SAS_AF=0.0139;SVTYPE=DEL\tGT\t.\nX\t48952964\tDUP_gs.X_CNV_X_48952964_48965729\tT\t<CN0>,<CN2>\t.\tPASS\tAC=1,1;AF=0.0002649,0.0002649;AFR_AF=0.001,0;AMR_AF=0,0;AN=3775;CS=DUP_gs;EAS_AF=0,0.0013;END=48965729;EUR_AF=0,0;NS=2504;SAS_AF=0,0;SVTYPE=CNV\tGT\t0\nX\t48984944\tBI_GS_DEL1_B3_P2946_16\tA\t<CN0>\t100\tPASS\tAC=7;AF=0.0180133;AFR_AF=0.014;AMR_AF=0.0191;AN=2542;CIEND=-19,20;CIPOS=-19,20;CS=DEL_union;EAS_AF=0.017;END=48986890;EUR_AF=0.0183;MC=YL_CN_STU_4587;NS=2504;SAS_AF=0.0237;SVTYPE=DEL\tGT\t.\nX\t49161314\tDUP_gs.X_CNV_X_49161314_49177223\tC\t<CN0>,<CN2>\t.\tPASS\tAC=1,3;AF=0.0002649,0.0007947;AFR_AF=0.001,0;AMR_AF=0,0;AN=3775;CS=DUP_gs;EAS_AF=0,0;END=49177223;EUR_AF=0,0;NS=2504;SAS_AF=0,0.0042;SVTYPE=CNV\tGT\t0\nX\t49368756\tDUP_gs.X_CNV_X_49368756_49377573\tC\t<CN0>,<CN2>\t.\tPASS\tAC=0,1;AF=0,0.0002649;AFR_AF=0,0;AMR_AF=0,0;AN=3775;CS=DUP_gs;EAS_AF=0,0;END=49377573;EUR_AF=0,0.0013;NS=2504;SAS_AF=0,0;SVTYPE=DUP\tGT\t0\nX\t49381978\tL1_umary_LINE1_3056\tG\t<INS:ME:LINE1>\t.\tPASS\tAC=80;AF=0.021192;AFR_AF=0.0738;AMR_AF=0.0115;AN=3775;CS=L1_umary;EAS_AF=0;EUR_AF=0;MEINFO=LINE1,2759,5093,+;NS=2504;SAS_AF=0;SVLEN=2334;SVTYPE=LINE1;TSD=null\tGT\t0\nX\t49382036\tBI_GS_DEL1_B3_P2947_2\tG\t<CN0>\t100\tPASS\tAC=66;AF=0.0275497;AFR_AF=0.0857;AMR_AF=0.0134;AN=2542;CIEND=-53,54;CIPOS=-53,54;CS=DEL_union;EAS_AF=0.0026;END=49385684;EUR_AF=0.0104;MC=YL_CN_ACB_5057,UW_VH_7759;NS=2504;SAS_AF=0.0014;SVTYPE=DEL\tGT\t.\nX\t49384996\tUW_VH_12718\tT\t<CN0>\t100\tPASS\tAC=10;AF=0.00291391;AFR_AF=0.005;AMR_AF=0;AN=2542;CIEND=0,230;CIPOS=-229,0;CS=DEL_union;EAS_AF=0.0026;END=49393308;EUR_AF=0.0052;NS=2504;SAS_AF=0;SVTYPE=DEL\tGT\t.\nX\t49405260\tDEL_pindel_53667\tCCTCAGAAAATCAGAGATCTGCTATCTGTCAGTATAGGTATTTTGCATTTTCTATAATTTATATAAATGGAATCATATAGTATGCATTCTTTTTTGTCTTTTTTTACTCATATTACTGTAAGATTCATCCAAATTGTTGCGTGTTTCAATAGGTCATTTATTTTCATTGCTGAGTAGTATTTTATTGTGTAGATATAACACAATTTAT\tC\t.\tPASS\tAC=105;AF=0.0278146;AFR_AF=0.011;AMR_AF=0.063;AN=3775;CS=DEL_pindel;EAS_AF=0.0223;END=49405467;EUR_AF=0.0183;NS=2504;SAS_AF=0.0418;SVTYPE=DEL\tGT\t0\nX\t49411799\tALU_umary_ALU_12662\tT\t<INS:ME:ALU>\t.\tPASS\tAC=48;AF=0.0127152;AFR_AF=0.0459;AMR_AF=0.0038;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0;MEINFO=AluYa5,6,281,-;NS=2504;SAS_AF=0;SVLEN=275;SVTYPE=ALU;TSD=CAGGAAAAGCTCTTT\tGT\t0\nX\t49628078\tDEL_pindel_53674\tCATTACATCAGTGTGTGTGAGTCCCAGGTAAGCCAGGTCTTTTCACCTCCTAGCTCAACACCCGAAGTATCCCATGATATTTGGCAGAATCCAAAAAGGAGGACAGAGCTAGTGAGGGCCAGCTGGGCCTGGTAGGGCATGCTTGTAGCCCTAGCTACTTGGGAGGGTGAGGCGAGAGGATCCTTGAGCCCAGGACCATAGCTGCAGTGAGCCATGATCATGCCACTGCACTCCAGCCTGGGCGACAGAACAGGATACTATTTCTAAAAAAAAATTTAAAAGTTAGTGAGGCCTAGGCCCCATCCCCTGCTTTTGTATTTTTATATAACTGGCTCAAAAGTACTCTCCTAGTCATATTTATTGTTCACATAGACATTATTGCAATGGGTATGACATTATTTCAATGGGTATAACATTATTTAATATGAGTCTCTAATCACTTATAATCCACTTTTTCAATTAATCTAAGTCACTTTAAATGTGCGACAATTACTAAAACTACTACTCCCAGTACTAGTACTACCACTACTACTATTAATAGGACCTTACAAATATCAGTTTTTGTGTTATCAGAGAAATATGAGGGTATTGTTAAATTTGAATCGGATGAATTACCTTTTGGTGTAATTGGTTCTAATATTGGTGATGCACATTTTCAAGAATTCAGGTAACATTAAACACTCAGTGAAATCACTTAGATTTTTACACTGTATTGATACATAGTTTA\tC\t.\tPASS\tAC=360;AF=0.0953642;AFR_AF=0.0499;AMR_AF=0.1088;AN=3775;CS=DEL_pindel;EAS_AF=0.1414;END=49628804;EUR_AF=0.0966;NS=2504;SAS_AF=0.0989;SVTYPE=DEL\tGT\t0\nX\t49945252\tUW_VH_16882\tG\t<CN0>\t100\tPASS\tAC=41;AF=0.0884768;AFR_AF=0.0937;AMR_AF=0.0973;AN=2542;CIEND=0,166;CIPOS=-219,0;CS=DEL_union;EAS_AF=0.0851;END=49946429;EUR_AF=0.0679;MC=BI_GS_DEL1_B5_P2947_570;NS=2504;SAS_AF=0.1003;SVTYPE=DEL\tGT\t.\nX\t50387143\tBI_GS_DEL1_B2_P2948_206\tG\t<CN0>\t100\tPASS\tAC=9;AF=0.00264901;AFR_AF=0.004;AMR_AF=0.0019;AN=2542;CIEND=-17,17;CIPOS=-17,17;CS=DEL_union;EAS_AF=0;END=50396588;EUR_AF=0.0065;MC=YL_CN_ACB_5058;NS=2504;SAS_AF=0;SVTYPE=DEL\tGT\t.\nX\t50640899\tALU_umary_ALU_12663\tT\t<INS:ME:ALU>\t.\tPASS\tAC=26;AF=0.00688742;AFR_AF=0.0209;AMR_AF=0.0095;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0;MEINFO=AluYf1,1,281,-;NS=2504;SAS_AF=0;SVLEN=280;SVTYPE=ALU;TSD=null\tGT\t0\nX\t51131680\tBI_GS_DEL1_B2_P2949_59\tA\t<CN0>\t100\tPASS\tAC=15;AF=0.00529801;AFR_AF=0.012;AMR_AF=0.0057;AN=2542;CIEND=-1,1;CIPOS=-1,1;CS=DEL_union;EAS_AF=0;END=51136610;EUR_AF=0.0065;MC=YL_CN_LWK_4179;NS=2504;SAS_AF=0;SVTYPE=DEL\tGT\t.\nX\t51259150\tDUP_gs.X_CNV_X_51259150_51276086\tA\t<CN0>,<CN2>\t.\tPASS\tAC=0,5;AF=0,0.0013245;AFR_AF=0,0;AMR_AF=0,0;AN=3775;CS=DUP_gs;EAS_AF=0,0;END=51276086;EUR_AF=0,0;NS=2504;SAS_AF=0,0.007;SVTYPE=DUP\tGT\t0\nX\t51326952\tDEL_pindel_53684\tTTGTGTTGAATCCATAGACCAATTTGGGGAAAATTGCCAAACAGCATCGTGTCTTGGAATCCATGAATATAGAAAGTCTTTCTAATAATTTAGATCTTCTTTAATTCATTGCAATG\tT\t.\tPASS\tAC=1208;AF=0.32;AFR_AF=0.317;AMR_AF=0.3168;AN=3775;CS=DEL_pindel;EAS_AF=0.3076;END=51327067;EUR_AF=0.3081;NS=2504;SAS_AF=0.3524;SVTYPE=DEL\tGT\t0\nX\t51373371\tDEL_pindel_53685\tCATATATATATATATATTTTATATATATATAATATATATATATTATATATATATTTTATATATATATAATATATATATATTATATATATATAATATATATATATATTTTATATATATATAATATATATATATTATATATATATATATATAT\tC\t.\tPASS\tAC=860;AF=0.227815;AFR_AF=0.2712;AMR_AF=0.1889;AN=3775;CS=DEL_pindel;EAS_AF=0.1584;END=51373521;EUR_AF=0.2533;NS=2504;SAS_AF=0.2423;SVTYPE=DEL\tGT\t0\nX\t51376938\tDEL_pindel_53686\tAGCTGGGATTACAGGCATGCGCCACCACGCCTGGCTAATTTTGTATTTTTAGTAGAGACGGGGTTTCTCCATGTTGGTCAGGCTGGTCTCGAACTCCCGACCTCAGGTGATCTGCCCTCCTCGGCCTCCCAAAGT\tA\t.\tPASS\tAC=1022;AF=0.270728;AFR_AF=0.2562;AMR_AF=0.2824;AN=3775;CS=DEL_pindel;EAS_AF=0.2513;END=51377072;EUR_AF=0.2689;NS=2504;SAS_AF=0.305;SVTYPE=DEL\tGT\t1\nX\t51551811\tUW_VH_21205\tA\t<CN0>\t100\tPASS\tAC=63;AF=0.113907;AFR_AF=0.1376;AMR_AF=0.0935;AN=2542;CIEND=0,193;CIPOS=-215,0;CS=DEL_union;EAS_AF=0.1047;END=51553424;EUR_AF=0.1084;MC=BI_GS_DEL1_B4_P2949_68;NS=2504;SAS_AF=0.1114;SVTYPE=DEL\tGT\t.\nX\t51693785\tALU_umary_ALU_12664\tG\t<INS:ME:ALU>\t.\tPASS\tAC=242;AF=0.064106;AFR_AF=0.0439;AMR_AF=0.042;AN=3775;CS=ALU_umary;EAS_AF=0.0602;EUR_AF=0.0966;MEINFO=AluUndef,3,281,+;NS=2504;SAS_AF=0.078;SVLEN=278;SVTYPE=ALU;TSD=AAAAGCTGTG\tGT\t0\nX\t51762707\tDUP_gs.X_CNV_X_51762707_51782852\tT\t<CN0>,<CN2>\t.\tPASS\tAC=0,1;AF=0,0.0002649;AFR_AF=0,0;AMR_AF=0,0;AN=3775;CS=DUP_gs;EAS_AF=0,0;END=51782852;EUR_AF=0,0.0013;NS=2504;SAS_AF=0,0;SVTYPE=DUP\tGT\t0\nX\t51784227\tDUP_gs.X_CNV_X_51784227_51853863\tG\t<CN0>,<CN2>\t.\tPASS\tAC=0,1;AF=0,0.0002649;AFR_AF=0,0.001;AMR_AF=0,0;AN=3775;CS=DUP_gs;EAS_AF=0,0;END=51853863;EUR_AF=0,0;NS=2504;SAS_AF=0,0;SVTYPE=DUP\tGT\t0\nX\t51856584\tYL_CN_IBS_4071\tA\t<CN0>\t100\tPASS\tAC=9;AF=0.00264901;AFR_AF=0.003;AMR_AF=0.0019;AN=2542;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0;END=51864982;EUR_AF=0.0078;NS=2504;SAS_AF=0;SVTYPE=DEL\tGT\t.\nX\t52651001\tDUP_gs.X_CNV_X_52651001_52693039\tG\t<CN0>,<CN2>\t.\tPASS\tAC=0,33;AF=0,0.00874172;AFR_AF=0,0.0259;AMR_AF=0,0.0095;AN=3775;CS=DUP_gs;EAS_AF=0,0.0026;END=52693039;EUR_AF=0,0;MC=DUP_gs.X_CNV_X_52659653_52699562;NS=2504;SAS_AF=0,0;SVTYPE=DUP\tGT\t0\nX\t52693577\tDUP_gs.X_CNV_X_52693577_52874118\tG\t<CN0>,<CN2>\t.\tPASS\tAC=0,2;AF=0,0.0005298;AFR_AF=0,0;AMR_AF=0,0.0019;AN=3775;CS=DUP_gs;EAS_AF=0,0.0013;END=52874118;EUR_AF=0,0;NS=2504;SAS_AF=0,0;SVTYPE=DUP\tGT\t0\nX\t52887623\tUW_VH_5424\tA\t<CN0>\t100\tPASS\tAC=12;AF=0.0283444;AFR_AF=0.0289;AMR_AF=0.0382;AN=2542;CIEND=0,102;CIPOS=-113,0;CS=DEL_union;EAS_AF=0.0236;END=52890080;EUR_AF=0.0261;NS=2504;SAS_AF=0.0279;SVTYPE=DEL\tGT\t.\nX\t52961285\tDEL_pindel_53697\tAACTAAATTTCTTTTTTTTTTTTTTTTTTTTTTTTTGAGAGGAGTCTCGCTCTGTCGCCCAGGCCGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTGTTAGCCAGGATGGTCTCGATCTCTTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTGCTGAGATTACAGGCGTGAGCCACCGCGCCCGGCC\tA\t.\tPASS\tAC=1309;AF=0.346755;AFR_AF=0.339;AMR_AF=0.355;AN=3775;CS=DEL_pindel;EAS_AF=0.2906;END=52961607;EUR_AF=0.3812;MEINFO=AluYb3a1,1,276,-;NS=2504;SAS_AF=0.3747;SVTYPE=DEL_ALU\tGT\t1\nX\t53135119\tUW_VH_10913\tA\t<CN0>\t100\tPASS\tAC=86;AF=0.0625166;AFR_AF=0.1376;AMR_AF=0.0401;AN=2542;CIEND=0,331;CIPOS=-325,0;CS=DEL_union;EAS_AF=0.0366;END=53137163;EUR_AF=0.03;MC=BI_GS_DEL1_B3_P2951_3,YL_CN_LWK_4184,YL_CN_YRI_5550;NS=2504;SAS_AF=0.0362;SVTYPE=DEL\tGT\t.\nX\t53137316\tBI_GS_DEL1_B3_P2951_4\tC\t<CN0>\t100\tPASS\tAC=12;AF=0.0148344;AFR_AF=0.0169;AMR_AF=0.0076;AN=2542;CIEND=-37,37;CIPOS=-37,37;CS=DEL_union;EAS_AF=0.0262;END=53140138;EUR_AF=0.0104;MC=YL_CN_ESN_4409;NS=2504;SAS_AF=0.0097;SVTYPE=DEL\tGT\t.\nX\t53319071\tBI_GS_DEL1_B3_P2951_9\tT\t<CN0>\t100\tPASS\tAC=12;AF=0.0317881;AFR_AF=0.0309;AMR_AF=0.042;AN=2542;CIEND=-15,15;CIPOS=-15,15;CS=DEL_union;EAS_AF=0.0183;END=53320350;EUR_AF=0.0418;NS=2504;SAS_AF=0.0292;SVTYPE=DEL\tGT\t.\nX\t53394360\tALU_umary_ALU_12665\tT\t<INS:ME:ALU>\t.\tPASS\tAC=1;AF=0.0002649;AFR_AF=0;AMR_AF=0;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0.0013;MEINFO=AluUndef,1,281,+;NS=2504;SAS_AF=0;SVLEN=280;SVTYPE=ALU;TSD=null\tGT\t0\nX\t53478093\tYL_CN_MXL_3736\tC\t<CN0>\t100\tPASS\tAC=41;AF=0.0164238;AFR_AF=0.0508;AMR_AF=0.0076;AN=2542;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0.0013;END=53491686;EUR_AF=0.0078;MC=BI_GS_DEL1_B3_P2951_13,UW_VH_16114;NS=2504;SAS_AF=0;SVTYPE=DEL\tGT\t.\nX\t53481193\tBI_GS_DEL1_B5_P2951_339\tT\t<CN0>\t100\tPASS\tAC=154;AF=0.177219;AFR_AF=0.2313;AMR_AF=0.1775;AN=2542;CIEND=-23,24;CIPOS=-23,24;CS=DEL_union;EAS_AF=0.1466;END=53482847;EUR_AF=0.1201;NS=2504;SAS_AF=0.195;SVTYPE=DEL\tGT\t.\nX\t53496416\tBI_GS_DEL1_B4_P2951_78\tT\t<CN0>\t100\tPASS\tAC=45;AF=0.0177483;AFR_AF=0.003;AMR_AF=0;AN=2542;CIEND=-1,2;CIPOS=-1,2;CS=DEL_union;EAS_AF=0.0052;END=53499888;EUR_AF=0.0065;MC=YL_CN_STU_4589;NS=2504;SAS_AF=0.0766;SVTYPE=DEL\tGT\t.\nX\t53513441\tBI_GS_DEL1_B2_P2951_238\tG\t<CN0>\t100\tPASS\tAC=9;AF=0.00264901;AFR_AF=0.002;AMR_AF=0;AN=2542;CIEND=-28,28;CIPOS=-28,28;CS=DEL_union;EAS_AF=0;END=53520776;EUR_AF=0.0091;MC=YL_CN_IBS_4072;NS=2504;SAS_AF=0.0014;SVTYPE=DEL\tGT\t.\nX\t53772344\tBI_GS_DEL1_B4_P2951_118\tT\t<CN0>\t100\tPASS\tAC=32;AF=0.0116556;AFR_AF=0.0379;AMR_AF=0.0057;AN=2542;CIEND=-14,15;CIPOS=-14,15;CS=DEL_union;EAS_AF=0;END=53778301;EUR_AF=0.0039;MC=UW_VH_8820,YL_CN_YRI_5552,YL_CN_ASW_4543;NS=2504;SAS_AF=0;SVTYPE=DEL\tGT\t.\nX\t53781934\tBI_GS_DEL1_B5_P2951_575\tA\t<CN0>\t100\tPASS\tAC=10;AF=0.00370861;AFR_AF=0.003;AMR_AF=0.0019;AN=2542;CIEND=-44,44;CIPOS=-44,44;CS=DEL_union;EAS_AF=0.0079;END=53808203;EUR_AF=0.0052;MC=YL_CN_JPT_4704;NS=2504;SAS_AF=0;SVTYPE=DEL\tGT\t.\nX\t53792163\tDEL_pindel_53708\tACATCAGGAAGAATGGGGAAACCATCCCCTCAAGCATTTATCCTTTGAGTTACAAG\tA\t.\tPASS\tAC=939;AF=0.248742;AFR_AF=0.2522;AMR_AF=0.2252;AN=3775;CS=DEL_pindel;EAS_AF=0.2487;END=53792218;EUR_AF=0.2507;NS=2504;SAS_AF=0.2591;SVTYPE=DEL\tGT\t0\nX\t53800902\tDEL_pindel_53709\tCAGGCGTGGTGGCAGGCACCTGTAATCTCAGCTACTAGGGAGGCTGAGGCAGAGAATTGCTTGAACCTGGGAGGCGGAGGTTGCAGTGAGCTGAGATCCCTCCACTGCACTCCAGCCTGGGTGACAGAGTGAGACTCCATCTAAAAAAAAAAAAAAGATTCAAGAGACTTGAACATGTTTGAAGGCCACGTCAGAGAAAGGAAAAGGCTGAAAATACAGAAGGGAGGGAGAGAGGGAACTCAGAGATCAAGTTTCCTGAGAAAGTAGAAGGGAATGGGGCACAGAATTCAGGTGGAAGGATTAGTCAACAAGAAAAGGGGCACCTCTTCCCCTGGAATAGGAGGGAAAGAGCAAAGAGTAGTCAGATTGGGATGCTCAGGAGTTTGTATGTACTCCATGTCAAGGAGTAGA\tC\t.\tPASS\tAC=790;AF=0.209272;AFR_AF=0.2084;AMR_AF=0.2195;AN=3775;CS=DEL_pindel;EAS_AF=0.2107;END=53801312;EUR_AF=0.1893;NS=2504;SAS_AF=0.2228;SVTYPE=DEL\tGT\t0\nX\t53819547\tBI_GS_DEL1_B3_P2951_27\tG\t<CN0>\t100\tPASS\tAC=149;AF=0.189139;AFR_AF=0.1775;AMR_AF=0.1794;AN=2542;CIEND=-10,10;CIPOS=-10,10;CS=DEL_union;EAS_AF=0.195;END=53820294;EUR_AF=0.1684;NS=2504;SAS_AF=0.2284;SVTYPE=DEL\tGT\t.\nX\t53820721\tDUP_gs.X_CNV_X_53820721_53862221\tT\t<CN0>,<CN2>\t.\tPASS\tAC=0,2;AF=0,0.0005298;AFR_AF=0,0.001;AMR_AF=0,0;AN=3775;CS=DUP_gs;EAS_AF=0,0;END=53862221;EUR_AF=0,0;NS=2504;SAS_AF=0,0.0014;SVTYPE=DUP\tGT\t0\nX\t53865806\tYL_CN_GBR_4516\tT\t<CN0>\t100\tPASS\tAC=5;AF=0.0015894;AFR_AF=0.002;AMR_AF=0.0019;AN=2542;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0;END=53872862;EUR_AF=0.0039;MC=BI_GS_DEL1_B1_P2951_518;NS=2504;SAS_AF=0;SVTYPE=DEL\tGT\t.\nX\t53996020\tUW_VH_20381\tA\t<CN0>\t100\tPASS\tAC=6;AF=0.00688742;AFR_AF=0.008;AMR_AF=0.0057;AN=2542;CIEND=0,181;CIPOS=-249,0;CS=DEL_union;EAS_AF=0.0131;END=53998329;EUR_AF=0;MC=BI_GS_DEL1_B4_P2951_149;NS=2504;SAS_AF=0.007;SVTYPE=DEL\tGT\t.\nX\t54310880\tDEL_pindel_53712\tGCAATTTCTTAAAAAGTCAAACACTTATTCTATGACCCAGCAATTCTATTTCTAGGTATAATTCAAGAGAAATGAAAACATGTTTACAAAAAAAAAAACTTATATAGGGATGTTCATTGCAGCTT\tG\t.\tPASS\tAC=783;AF=0.207417;AFR_AF=0.1864;AMR_AF=0.2004;AN=3775;CS=DEL_pindel;EAS_AF=0.2317;END=54311004;EUR_AF=0.1945;NS=2504;SAS_AF=0.2298;SVTYPE=DEL\tGT\t1\nX\t54395463\tYL_CN_ITU_4682\tC\t<CN0>\t100\tPASS\tAC=5;AF=0.00450331;AFR_AF=0.007;AMR_AF=0;AN=2542;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0.0079;END=54407670;EUR_AF=0.0039;NS=2504;SAS_AF=0.0014;SVTYPE=DEL\tGT\t.\nX\t54576156\tDEL_pindel_53716\tAAAGAAGACACGCATGTGCCCACATACACTTTGACCCTCGAACATAATCACATACCTAGAGTTACAG\tA\t.\tPASS\tAC=277;AF=0.0733775;AFR_AF=0.0698;AMR_AF=0.0649;AN=3775;CS=DEL_pindel;EAS_AF=0.0838;END=54576222;EUR_AF=0.0653;NS=2504;SAS_AF=0.0822;SVTYPE=DEL\tGT\t1\nX\t54639392\tDEL_pindel_53717\tATTTGGATGTCTGGGTCTCTAGCAAGGCCAGGGAAGTTTTTCTTGATTATTCTACTGAATATGTTTTCCAAGCTTTTACGGTTCTCTTCTTTCTTAGGAACACTGATTATTCTTATGTTTGGTTGTTTAACATAATCCCAGACTCCTTGGAGACTTTGTTCATATTTCCTTACTCTTTTTTC\tA\t.\tPASS\tAC=588;AF=0.155762;AFR_AF=0.1386;AMR_AF=0.145;AN=3775;CS=DEL_pindel;EAS_AF=0.1688;END=54639573;EUR_AF=0.1671;NS=2504;SAS_AF=0.1616;SVTYPE=DEL\tGT\t0\nX\t54855750\tYL_CN_LWK_4187\tA\t<CN0>\t100\tPASS\tAC=10;AF=0.00397351;AFR_AF=0.011;AMR_AF=0.0019;AN=2542;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0;END=54865350;EUR_AF=0.0039;NS=2504;SAS_AF=0;SVTYPE=DEL\tGT\t.\nX\t54862268\tDEL_pindel_53719\tTGATCTTTTGTATTGTTTTCTTCATTTTAGTTTCTTTATTTGTGCTCTAACCTTTATTATTTTTTCTTCTACTAATTTAGGGTTTGGTTTGCTCTTGCTTTTCTAGTTCCTTAAGATGCATCATTATGTTGTTTATGTTTTTCTTCTTATTTGATGTAAGCACTTATAGCTGTAAAGTTCCCTGTGAGTCCCGCTCTTACTGTATCCCATAGGTTTTGGTATATTGTGTTTCCATTATCATCTGTTTTGAGAAAATTTTCAGTTTCTTTCAGAATTTCTTCATTGACCCACTCTTCATTTAGGGGCATATTCTTCGTTGACCCACTGTTCATTTAG\tT\t.\tPASS\tAC=897;AF=0.237616;AFR_AF=0.2233;AMR_AF=0.2347;AN=3775;CS=DEL_pindel;EAS_AF=0.2474;END=54862603;EUR_AF=0.2324;NS=2504;SAS_AF=0.2549;SVTYPE=DEL\tGT\t1\nX\t54884545\tYL_CN_LWK_4188\tA\t<CN0>\t100\tPASS\tAC=8;AF=0.00238411;AFR_AF=0.005;AMR_AF=0.0019;AN=2542;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0;END=54907315;EUR_AF=0.0039;NS=2504;SAS_AF=0;SVTYPE=DEL\tGT\t.\nX\t54925379\tDEL_pindel_53721\tCCAGCAGGTTGTGCTGGGACACTGCTGTGATGCAGCCCCAAAGAAAATTGTG\tC\t.\tPASS\tAC=674;AF=0.178543;AFR_AF=0.1834;AMR_AF=0.1813;AN=3775;CS=DEL_pindel;EAS_AF=0.1715;END=54925430;EUR_AF=0.1841;NS=2504;SAS_AF=0.1713;SVTYPE=DEL\tGT\t1\nX\t54982950\tBI_GS_DEL1_B5_P2952_598\tA\t<CN0>\t100\tPASS\tAC=16;AF=0.0360265;AFR_AF=0.0319;AMR_AF=0.0363;AN=2542;CIEND=-3,4;CIPOS=-3,4;CS=DEL_union;EAS_AF=0.0288;END=54984213;EUR_AF=0.0392;NS=2504;SAS_AF=0.046;SVTYPE=DEL\tGT\t.\nX\t55107915\tUW_VH_19612\tT\t<CN0>\t100\tPASS\tAC=8;AF=0.00211921;AFR_AF=0.003;AMR_AF=0.0019;AN=2542;CIEND=0,501;CIPOS=-70,0;CS=DEL_union;EAS_AF=0;END=55243227;EUR_AF=0.0052;MC=UW_VH_20005,UW_VH_4662;NS=2504;SAS_AF=0;SVTYPE=DEL\tGT\t.\nX\t55115353\tBI_GS_DEL1_B2_P2953_39\tG\t<CN0>\t100\tPASS\tAC=8;AF=0.00370861;AFR_AF=0.008;AMR_AF=0;AN=2542;CIEND=-39,39;CIPOS=-39,39;CS=DEL_union;EAS_AF=0.0026;END=55123489;EUR_AF=0.0052;NS=2504;SAS_AF=0;SVTYPE=DEL\tGT\t.\nX\t55165288\tUW_VH_25450\tT\t<CN0>\t100\tPASS\tAC=7;AF=0.00211921;AFR_AF=0.002;AMR_AF=0;AN=2542;CIEND=0,230;CIPOS=-226,0;CS=DEL_union;EAS_AF=0.0013;END=55170174;EUR_AF=0.0052;NS=2504;SAS_AF=0.0014;SVTYPE=DEL\tGT\t.\nX\t55174560\tALU_umary_ALU_12666\tG\t<INS:ME:ALU>\t.\tPASS\tAC=1;AF=0.0002649;AFR_AF=0;AMR_AF=0;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0.0013;MEINFO=AluUndef,1,266,+;NS=2504;SAS_AF=0;SVLEN=265;SVTYPE=ALU;TSD=null\tGT\t0\nX\t55175838\tL1_umary_LINE1_3057\tT\t<INS:ME:LINE1>\t.\tPASS\tAC=1;AF=0.0002649;AFR_AF=0.001;AMR_AF=0;AN=3775;CS=L1_umary;EAS_AF=0;EUR_AF=0;MEINFO=LINE1,61,6009,-;NS=2504;SAS_AF=0;SVLEN=5948;SVTYPE=LINE1;TSD=null\tGT\t0\nX\t55507944\tDUP_gs.X_CNV_X_55507944_55511893\tA\t<CN0>,<CN2>\t.\tPASS\tAC=0,2;AF=0,0.0005298;AFR_AF=0,0;AMR_AF=0,0.0019;AN=3775;CS=DUP_gs;EAS_AF=0,0.0013;END=55511893;EUR_AF=0,0;NS=2504;SAS_AF=0,0;SVTYPE=DUP\tGT\t0\nX\t55585160\tL1_umary_LINE1_3058\tT\t<INS:ME:LINE1>\t.\tPASS\tAC=1082;AF=0.286623;AFR_AF=0.1785;AMR_AF=0.4084;AN=3775;CS=L1_umary;EAS_AF=0.356;EUR_AF=0.2755;MEINFO=LINE1,1337,6019,-;NS=2504;SAS_AF=0.2869;SVLEN=4682;SVTYPE=LINE1;TSD=ATATATTCTTGTTTTCTT\tGT\t0\nX\t55658310\tBI_GS_DEL1_B2_P2953_287\tG\t<CN0>\t100\tPASS\tAC=5;AF=0.00291391;AFR_AF=0.002;AMR_AF=0.0038;AN=2542;CIEND=-36,36;CIPOS=-36,36;CS=DEL_union;EAS_AF=0.0026;END=55661463;EUR_AF=0.0065;NS=2504;SAS_AF=0;SVTYPE=DEL\tGT\t.\nX\t55666958\tALU_umary_ALU_12667\tG\t<INS:ME:ALU>\t.\tPASS\tAC=1;AF=0.0002649;AFR_AF=0;AMR_AF=0;AN=3775;CS=ALU_umary;EAS_AF=0.0013;EUR_AF=0;MEINFO=AluYb8,9,279,+;NS=2504;SAS_AF=0;SVLEN=270;SVTYPE=ALU;TSD=null\tGT\t0\nX\t55691019\tYL_CN_GBR_4518\tA\t<CN0>\t100\tPASS\tAC=7;AF=0.00370861;AFR_AF=0.005;AMR_AF=0.0057;AN=2542;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0.0013;END=55695082;EUR_AF=0.0065;NS=2504;SAS_AF=0;SVTYPE=DEL\tGT\t.\nX\t55702401\tUW_VH_3172\tG\t<CN0>\t100\tPASS\tAC=842;AF=0.325298;AFR_AF=0.331;AMR_AF=0.4561;AN=2542;CIEND=0,454;CIPOS=-420,0;CS=DEL_union;EAS_AF=0.2814;END=55709877;EUR_AF=0.2911;MC=BI_GS_DEL1_B1_P2953_410,YL_CN_CLM_3848;NS=2504;SAS_AF=0.305;SVTYPE=DEL\tGT\t.\nX\t55721534\tDEL_pindel_53731\tGACCATCTGGACAGCAAAAAACTGATGTATAACGTTTTACTCCCCCAAAACTTAACTACTCAGCCTACTGTTGATGAGAAGTCTTACTGATAACATAAACAGTTGATTAACATATATTTCATATATTTTATGTATATATATATATGCTATAAACTGTATACTTACAATAAAAAAGCTAGAGGAAAGAAAATATTATTAAGAAAATCATAAAGAAGATAAAATAAATTTACTATTCATTTAGTGGAAGTGGATCATCATAAAGGTCTTCACAGTGACTAGGCTGAGGGGGAGGAGAAAGAAGAGAGGTTGGTCTTGCTGTCTCAGATGTGGCAGAGATGAAAGACGTGGAGGAGATGAAAGGTGAAGCAAGAGAGGCAGGTATATCCTGTTTAACTTTAGAGAAACACATCATAATTTCTGCCGGACTGTATTAGTCTCTTCTCACATTGCTATAAAGATACTACCTGAGGCTGGATAATTTATGAAGAAAAGAGGATGAATTTGACTCACAGTTCTGCATGTCTAGGGAGGCCTCAGGAAACTTACAATCATGGCTGAAGGTGAAGGGGAAGCAAGGCATGTCTTACATGATGGCAGGAGAGAGAGAGAGCATGCAGGGAATACTGCCTCTTTTAAAACGATCAGATTGTAATTGCCCAATGGGTTC\tG\t.\tPASS\tAC=311;AF=0.0823841;AFR_AF=0.0489;AMR_AF=0.0935;AN=3775;CS=DEL_pindel;EAS_AF=0.0942;END=55722200;EUR_AF=0.1044;NS=2504;SAS_AF=0.085;SVTYPE=DEL\tGT\t1\nX\t55801775\tBI_GS_DEL1_B2_P2953_369\tA\t<CN0>\t100\tPASS\tAC=7;AF=0.0018543;AFR_AF=0.003;AMR_AF=0.0019;AN=2542;CIEND=-14,14;CIPOS=-14,14;CS=DEL_union;EAS_AF=0;END=55808928;EUR_AF=0.0039;NS=2504;SAS_AF=0;SVTYPE=DEL\tGT\t.\nX\t55978161\tBI_GS_DEL1_B1_P2953_567\tT\t<CN0>\t100\tPASS\tAC=4;AF=0.0015894;AFR_AF=0.002;AMR_AF=0;AN=2542;CIEND=-4,4;CIPOS=-4,4;CS=DEL_union;EAS_AF=0.0013;END=55981434;EUR_AF=0.0039;NS=2504;SAS_AF=0;SVTYPE=DEL\tGT\t.\nX\t56079069\tDUP_gs.X_CNV_X_56079069_56102670\tC\t<CN0>,<CN2>\t.\tPASS\tAC=2,1;AF=0.0005298,0.0002649;AFR_AF=0,0;AMR_AF=0,0;AN=3775;CS=DUP_gs;EAS_AF=0,0.0013;END=56102670;EUR_AF=0.0026,0;NS=2504;SAS_AF=0,0;SVTYPE=CNV\tGT\t0\nX\t56079467\tDUP_gs.X_CNV_X_56079467_56197996\tG\t<CN0>,<CN2>\t.\tPASS\tAC=0,1;AF=0,0.0002649;AFR_AF=0,0;AMR_AF=0,0;AN=3775;CS=DUP_gs;EAS_AF=0,0.0013;END=56197996;EUR_AF=0,0;NS=2504;SAS_AF=0,0;SVTYPE=DUP\tGT\t0\nX\t56263746\tDUP_gs.X_CNV_X_56263746_56293622\tA\t<CN0>,<CN2>\t.\tPASS\tAC=0,1;AF=0,0.0002649;AFR_AF=0,0;AMR_AF=0,0;AN=3775;CS=DUP_gs;EAS_AF=0,0.0013;END=56293622;EUR_AF=0,0;NS=2504;SAS_AF=0,0;SVTYPE=DUP\tGT\t0\nX\t56284324\tDUP_gs.X_CNV_X_56284324_56375486\tG\t<CN0>,<CN2>\t.\tPASS\tAC=0,2;AF=0,0.0005298;AFR_AF=0,0;AMR_AF=0,0;AN=3775;CS=DUP_gs;EAS_AF=0,0.0013;END=56375486;EUR_AF=0,0.0013;NS=2504;SAS_AF=0,0;SVTYPE=DUP\tGT\t0\nX\t56323765\tYL_CN_JPT_4707\tA\t<CN0>\t100\tPASS\tAC=6;AF=0.0018543;AFR_AF=0.002;AMR_AF=0;AN=2542;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0.0013;END=56329494;EUR_AF=0.0052;NS=2504;SAS_AF=0;SVTYPE=DEL\tGT\t.\nX\t56376100\tYL_CN_CDX_3833\tA\t<CN0>\t100\tPASS\tAC=5;AF=0.00529801;AFR_AF=0.006;AMR_AF=0.0019;AN=2542;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0.0092;END=56380217;EUR_AF=0.0078;NS=2504;SAS_AF=0;SVTYPE=DEL\tGT\t.\nX\t56404702\tL1_umary_LINE1_3059\tT\t<INS:ME:LINE1>\t.\tPASS\tAC=1;AF=0.0002649;AFR_AF=0;AMR_AF=0;AN=3775;CS=L1_umary;EAS_AF=0;EUR_AF=0;MEINFO=LINE1,5451,6007,-;NS=2504;SAS_AF=0.0014;SVLEN=556;SVTYPE=LINE1;TSD=null\tGT\t0\nX\t56425378\tDUP_gs.X_CNV_X_56425378_56480257\tC\t<CN0>,<CN2>\t.\tPASS\tAC=4,5;AF=0.0010596,0.0013245;AFR_AF=0.002,0;AMR_AF=0,0.0038;AN=3775;CS=DUP_gs;EAS_AF=0.0026,0.0013;END=56480257;EUR_AF=0,0.0013;NS=2504;SAS_AF=0,0.0014;SVTYPE=CNV\tGT\t0\nX\t56454806\tDUP_gs.X_CNV_X_56454806_56476291\tC\t<CN0>,<CN2>\t.\tPASS\tAC=2,5;AF=0.0005298,0.0013245;AFR_AF=0,0;AMR_AF=0.0038,0.0038;AN=3775;CS=DUP_gs;EAS_AF=0,0.0013;END=56476291;EUR_AF=0,0.0013;NS=2504;SAS_AF=0,0.0014;SVTYPE=CNV\tGT\t0\nX\t56456104\tUW_VH_10518\tG\t<CN0>\t100\tPASS\tAC=33;AF=0.0222517;AFR_AF=0.0439;AMR_AF=0.0191;AN=2542;CIEND=0,466;CIPOS=-308,0;CS=DEL_union;EAS_AF=0.0092;END=56463112;EUR_AF=0.0183;MC=BI_GS_DEL1_B5_P2954_313;NS=2504;SAS_AF=0.0125;SVTYPE=DEL\tGT\t.\nX\t56458535\tYL_CN_PUR_5658\tC\t<CN0>\t100\tPASS\tAC=10;AF=0.00344371;AFR_AF=0.002;AMR_AF=0.0095;AN=2542;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0.0013;END=56476593;EUR_AF=0.0052;NS=2504;SAS_AF=0.0014;SVTYPE=DEL\tGT\t.\nX\t56468360\tDUP_gs.X_CNV_X_56468360_56475190\tG\t<CN0>,<CN2>\t.\tPASS\tAC=5,8;AF=0.0013245,0.00211921;AFR_AF=0,0.002;AMR_AF=0.0057,0.0038;AN=3775;CS=DUP_gs;EAS_AF=0.0013,0;END=56475190;EUR_AF=0,0.0026;NS=2504;SAS_AF=0.0014,0.0028;SVTYPE=CNV\tGT\t0\nX\t56469196\tYL_CN_PEL_4334\tT\t<CN0>\t100\tPASS\tAC=10;AF=0.00344371;AFR_AF=0.002;AMR_AF=0.0095;AN=2542;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0.0013;END=56477683;EUR_AF=0.0052;NS=2504;SAS_AF=0.0014;SVTYPE=DEL\tGT\t.\nX\t56471419\tDUP_gs.X_CNV_X_56471419_56501194\tA\t<CN0>,<CN2>\t.\tPASS\tAC=0,6;AF=0,0.0015894;AFR_AF=0,0;AMR_AF=0,0.0038;AN=3775;CS=DUP_gs;EAS_AF=0,0;END=56501194;EUR_AF=0,0.0026;NS=2504;SAS_AF=0,0.0028;SVTYPE=DUP\tGT\t0\nX\t56485624\tDUP_gs.X_CNV_X_56485624_56514805\tT\t<CN0>,<CN2>\t.\tPASS\tAC=0,5;AF=0,0.0013245;AFR_AF=0,0;AMR_AF=0,0.0038;AN=3775;CS=DUP_gs;EAS_AF=0,0;END=56514805;EUR_AF=0,0.0013;NS=2504;SAS_AF=0,0.0028;SVTYPE=DUP\tGT\t0\nX\t56495410\tDUP_gs.X_CNV_X_56495410_56516794\tG\t<CN0>,<CN2>\t.\tPASS\tAC=0,4;AF=0,0.0010596;AFR_AF=0,0;AMR_AF=0,0.0038;AN=3775;CS=DUP_gs;EAS_AF=0,0;END=56516794;EUR_AF=0,0.0013;NS=2504;SAS_AF=0,0.0014;SVTYPE=DUP\tGT\t0\nX\t56660990\tBI_GS_DEL1_B1_P2954_371\tG\t<CN0>\t100\tPASS\tAC=347;AF=0.137748;AFR_AF=0.4357;AMR_AF=0.0534;AN=2542;CIEND=0,1;CIPOS=0,1;CS=DEL_union;EAS_AF=0.0013;END=56672840;EUR_AF=0.0222;MC=YL_CN_MXL_3738;NS=2504;SAS_AF=0.0515;SVTYPE=DEL\tGT\t.\nX\t56736234\tDUP_gs.X_CNV_X_56736234_56761933\tA\t<CN0>,<CN2>\t.\tPASS\tAC=0,1;AF=0,0.0002649;AFR_AF=0,0;AMR_AF=0,0;AN=3775;CS=DUP_gs;EAS_AF=0,0.0013;END=56761933;EUR_AF=0,0;NS=2504;SAS_AF=0,0;SVTYPE=DUP\tGT\t0\nX\t56870760\tBI_GS_DEL1_B5_P2954_590\tC\t<CN0>\t100\tPASS\tAC=9;AF=0.00238411;AFR_AF=0.004;AMR_AF=0;AN=2542;CIEND=-22,23;CIPOS=-22,23;CS=DEL_union;EAS_AF=0;END=56880191;EUR_AF=0.0065;MC=YL_CN_LWK_4193;NS=2504;SAS_AF=0;SVTYPE=DEL\tGT\t.\nX\t56875182\tDEL_pindel_53737\tGGAAGTAATGAATATGAAAATGAAAAACCGGTACCAGCCACTGCAAAAACACACCAAAATATAAAGACCCAAGACACTATGAAGAAACTGCATCAACTAATGT\tG\t.\tPASS\tAC=312;AF=0.082649;AFR_AF=0.0359;AMR_AF=0.0897;AN=3775;CS=DEL_pindel;EAS_AF=0.1322;END=56875284;EUR_AF=0.1084;NS=2504;SAS_AF=0.0627;SVTYPE=DEL\tGT\t1\nX\t56945446\tBI_GS_DEL1_B3_P2954_33\tG\t<CN0>\t100\tPASS\tAC=23;AF=0.00768212;AFR_AF=0.0239;AMR_AF=0.0019;AN=2542;CIEND=-1,1;CIPOS=-1,1;CS=DEL_union;EAS_AF=0;END=56956844;EUR_AF=0.0052;MC=YL_CN_LWK_4194;NS=2504;SAS_AF=0;SVTYPE=DEL\tGT\t.\nX\t56981660\tBI_GS_DEL1_B4_P2954_110\tT\t<CN0>\t100\tPASS\tAC=173;AF=0.243179;AFR_AF=0.2662;AMR_AF=0.2023;AN=2542;CIEND=-58,58;CIPOS=-58,58;CS=DEL_union;EAS_AF=0.2317;END=56982346;EUR_AF=0.218;NS=2504;SAS_AF=0.2799;SVTYPE=DEL\tGT\t.\nX\t57042857\tBI_GS_DEL1_B5_P2955_40\tT\t<CN0>\t100\tPASS\tAC=14;AF=0.0349669;AFR_AF=0.0359;AMR_AF=0.0286;AN=2542;CIEND=-30,30;CIPOS=-30,30;CS=DEL_union;EAS_AF=0.0419;END=57045761;EUR_AF=0.0313;NS=2504;SAS_AF=0.0348;SVTYPE=DEL\tGT\t.\nX\t57237328\tYL_CN_LWK_4195\tA\t<CN0>\t100\tPASS\tAC=9;AF=0.00238411;AFR_AF=0.004;AMR_AF=0.0019;AN=2542;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0;END=57261003;EUR_AF=0.0052;MC=BI_GS_DEL1_B4_P2955_29;NS=2504;SAS_AF=0;SVTYPE=DEL\tGT\t.\nX\t57273089\tDUP_gs.X_CNV_X_57273089_57349083\tC\t<CN0>,<CN2>\t.\tPASS\tAC=0,1;AF=0,0.0002649;AFR_AF=0,0.001;AMR_AF=0,0;AN=3775;CS=DUP_gs;EAS_AF=0,0;END=57349083;EUR_AF=0,0;NS=2504;SAS_AF=0,0;SVTYPE=DUP\tGT\t0\nX\t57384886\tBI_GS_DEL1_B5_P2955_282\tT\t<CN0>\t100\tPASS\tAC=5;AF=0.0015894;AFR_AF=0.003;AMR_AF=0;AN=2542;CIEND=-26,26;CIPOS=-26,26;CS=DEL_union;EAS_AF=0;END=57391046;EUR_AF=0.0039;MC=YL_CN_LWK_4196;NS=2504;SAS_AF=0;SVTYPE=DEL\tGT\t.\nX\t57514064\tDEL_pindel_53741\tCATGTGGAGTAACTGGGACCCTCATACATTTCTGGTAAGACTGTTGTCACATTGGTGCAGACTCTTTGGAAAACAATTTGGCATTTTCTTAA\tC\t.\tPASS\tAC=822;AF=0.217748;AFR_AF=0.2064;AMR_AF=0.2195;AN=3775;CS=DEL_pindel;EAS_AF=0.2304;END=57514155;EUR_AF=0.2089;NS=2504;SAS_AF=0.2284;SVTYPE=DEL\tGT\t1\nX\t57730485\tDUP_gs.X_CNV_X_57730485_57749071\tG\t<CN0>,<CN2>,<CN3>\t.\tPASS\tAC=0,183,116;AF=0,0.0484768,0.0307285;AFR_AF=0,0.1695,0.1087;AMR_AF=0,0.0229,0.0134;AN=3775;CS=DUP_gs;EAS_AF=0,0,0;END=57749071;EUR_AF=0,0.0013,0;NS=2504;SAS_AF=0,0,0;SVTYPE=CNV\tGT\t0\nX\t57731363\tDUP_gs.X_CNV_X_57731363_57753009\tC\t<CN0>,<CN2>,<CN3>,<CN4>,<CN5>\t.\tPASS\tAC=4,24,156,66,63;AF=0.0010596,0.00635762,0.0413245,0.0174834,0.0166887;AFR_AF=0.003,0.0209,0.1456,0.0608,0.0588;AMR_AF=0.0019,0.0057,0.0172,0.0095,0.0076;AN=3775;CS=DUP_gs;EAS_AF=0,0,0,0,0;END=57753009;EUR_AF=0,0,0.0013,0,0;NS=2504;SAS_AF=0,0,0,0,0;SVTYPE=CNV\tGT\t0\nX\t57734979\tDUP_gs.X_CNV_X_57734979_57751980\tT\t<CN0>,<CN2>,<CN3>,<CN4>,<CN5>,<CN6>\t.\tPASS\tAC=2,15,117,64,54,56;AF=0.0005298,0.00397351,0.0309934,0.0169536,0.0143046,0.0148344;AFR_AF=0.001,0.013,0.1117,0.0548,0.0518,0.0528;AMR_AF=0.0019,0.0038,0.0076,0.0172,0.0038,0.0057;AN=3775;CS=DUP_gs;EAS_AF=0,0,0,0,0,0;END=57751980;EUR_AF=0,0,0.0013,0,0,0;NS=2504;SAS_AF=0,0,0,0,0,0;SVTYPE=CNV\tGT\t0\nX\t57737171\tBI_GS_DEL1_B4_P2955_84\tA\t<CN0>\t100\tPASS\tAC=5;AF=0.00344371;AFR_AF=0.004;AMR_AF=0;AN=2542;CIEND=-4,4;CIPOS=-4,4;CS=DEL_union;EAS_AF=0.0026;END=57743177;EUR_AF=0.0065;MC=YL_CN_CHB_4660;NS=2504;SAS_AF=0.0028;SVTYPE=DEL\tGT\t.\nX\t57740875\tDUP_gs.X_CNV_X_57740875_57781019\tA\t<CN0>,<CN2>,<CN3>\t.\tPASS\tAC=0,195,98;AF=0,0.0516556,0.0259603;AFR_AF=0,0.1795,0.0927;AMR_AF=0,0.0267,0.0095;AN=3775;CS=DUP_gs;EAS_AF=0,0,0;END=57781019;EUR_AF=0,0.0013,0;NS=2504;SAS_AF=0,0,0;SVTYPE=CNV\tGT\t0\nX\t57745725\tDUP_gs.X_CNV_X_57745725_57764368\tA\t<CN0>,<CN2>,<CN3>,<CN4>,<CN5>\t.\tPASS\tAC=1,25,160,60,64;AF=0.0002649,0.00662252,0.0423841,0.015894,0.0169536;AFR_AF=0.001,0.0219,0.1496,0.0548,0.0598;AMR_AF=0,0.0057,0.0172,0.0095,0.0076;AN=3775;CS=DUP_gs;EAS_AF=0,0,0,0,0;END=57764368;EUR_AF=0,0,0.0013,0,0;NS=2504;SAS_AF=0,0,0,0,0;SVTYPE=CNV\tGT\t0\nX\t57806452\tL1_umary_LINE1_3060\tT\t<INS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nX\t63044083\tBI_GS_DEL1_B3_P2961_3\tG\t<CN0>\t100\tPASS\tAC=45;AF=0.0164238;AFR_AF=0.0528;AMR_AF=0.0115;AN=2542;CIEND=0,1;CIPOS=0,1;CS=DEL_union;EAS_AF=0;END=63051019;EUR_AF=0.0039;MC=YL_CN_ASW_4560,UW_VH_7628;NS=2504;SAS_AF=0;SVTYPE=DEL\tGT\t.\nX\t63097843\tDEL_pindel_53755\tAAATCCAAAATTAAAAGGCTGCATATGCTATGATTCCAACCATATGACATTCTGGAAAAGGCCAATCTATGAAGACAGTAAAAAAAAAAAAATATCAGTAGTTGCCAGGGGTTAGTGGGGAGGGAGCCATGAATAGGCAGGGCACAGAG\tA\t.\tPASS\tAC=1159;AF=0.30702;AFR_AF=0.2991;AMR_AF=0.3053;AN=3775;CS=DEL_pindel;EAS_AF=0.2919;END=63097991;EUR_AF=0.2977;NS=2504;SAS_AF=0.3454;SVTYPE=DEL\tGT\t1\nX\t63127039\tDEL_pindel_53756\tACAGAGAGCCAAATCATGAGTCAACTCCCATTCACAATTGCTACTAAGAGAATAAAATACCTAGGAATACAACTTACAAGAGATGTGAAGGACCTCTTCAAGAAGAACCACAAACCACTGCTCAAGGAAATAAGAGAGGACACAAGCAAACGGAAAAACATTCCATGCTCATGGATAGGAAGAATCAATATTGTGAAAATGGCCATACCGGGCATAGTAATTTATAGATTCAATGCTATCCCCATCGAACTACCATTGGCTTTCTTCACAGAATTGGACAAAAACTATTTTAAACTTCATACGGAACCAAAAAAAAAGCCCGCATAGCCAATACAATCCT\tA\t.\tPASS\tAC=764;AF=0.202384;AFR_AF=0.1755;AMR_AF=0.208;AN=3775;CS=DEL_pindel;EAS_AF=0.2225;END=63127378;EUR_AF=0.205;NS=2504;SAS_AF=0.2117;SVTYPE=DEL\tGT\t0\nX\t63164414\tDEL_pindel_53757\tTGAATGGTTCTGGTAATGGCCAGAACAAAGTCAAAAGCCCTGAGAACACATAGAACTTGACCTCAGCCGGAAGTATGGTTAAAAACATAAACCAAATGGGGGC\tT\t.\tPASS\tAC=1219;AF=0.322914;AFR_AF=0.333;AMR_AF=0.313;AN=3775;CS=DEL_pindel;EAS_AF=0.3115;END=63164516;EUR_AF=0.3003;NS=2504;SAS_AF=0.3524;SVTYPE=DEL\tGT\t1\nX\t63229090\tBI_GS_DEL1_B1_P2961_141\tT\t<CN0>\t100\tPASS\tAC=9;AF=0.00238411;AFR_AF=0.003;AMR_AF=0;AN=2542;CIEND=-6,7;CIPOS=-6,7;CS=DEL_union;EAS_AF=0.0013;END=63244159;EUR_AF=0.0065;MC=EM_DL_DEL105180;NS=2504;SAS_AF=0;SVTYPE=DEL\tGT\t.\nX\t63387854\tDEL_pindel_53759\tTATATATATATATATATATATATATATATATATATATATGTATATATATAC\tT\t.\tPASS\tAC=1025;AF=0.271523;AFR_AF=0.2632;AMR_AF=0.271;AN=3775;CS=DEL_pindel;EAS_AF=0.2474;END=63387904;EUR_AF=0.282;NS=2504;SAS_AF=0.2981;SVTYPE=DEL\tGT\t1\nX\t63440816\tALU_umary_ALU_12673\tT\t<INS:ME:ALU>\t.\tPASS\tAC=33;AF=0.00874172;AFR_AF=0.0249;AMR_AF=0.0038;AN=3775;CS=ALU_umary;EAS_AF=0.0039;EUR_AF=0;MEINFO=AluYa5,21,280,+;NS=2504;SAS_AF=0.0042;SVLEN=259;SVTYPE=ALU;TSD=AAAAAACCAAGGTATT\tGT\t0\nX\t63537694\tEM_DL_DEL105181\tC\t<CN0>\t100\tPASS\tAC=6;AF=0.0015894;AFR_AF=0.003;AMR_AF=0;AN=2542;CIEND=-150,150;CIPOS=-150,150;CS=DEL_union;EAS_AF=0;END=63543054;EUR_AF=0.0039;NS=2504;SAS_AF=0;SVTYPE=DEL\tGT\t.\nX\t63538179\tDUP_gs.X_CNV_X_63538179_63542761\tT\t<CN0>,<CN2>\t.\tPASS\tAC=1,4;AF=0.0002649,0.0010596;AFR_AF=0.001,0.002;AMR_AF=0,0.0019;AN=3775;CS=DUP_gs;EAS_AF=0,0.0013;END=63542761;EUR_AF=0,0;NS=2504;SAS_AF=0,0;SVTYPE=CNV\tGT\t0\nX\t63627966\tBI_GS_DEL1_B2_P2961_322\tC\t<CN0>\t100\tPASS\tAC=6;AF=0.0018543;AFR_AF=0.002;AMR_AF=0.0038;AN=2542;CIEND=-15,15;CIPOS=-15,15;CS=DEL_union;EAS_AF=0;END=63635547;EUR_AF=0.0039;MC=YL_CN_PEL_4346;NS=2504;SAS_AF=0;SVTYPE=DEL\tGT\t.\nX\t63670635\tBI_GS_DEL1_B3_P2961_20\tT\t<CN0>\t100\tPASS\tAC=7;AF=0.00264901;AFR_AF=0.002;AMR_AF=0;AN=2542;CIEND=-39,39;CIPOS=-39,39;CS=DEL_union;EAS_AF=0;END=63675332;EUR_AF=0.0052;MC=YL_CN_BEB_3700;NS=2504;SAS_AF=0.0056;SVTYPE=DEL\tGT\t.\nX\t63716412\tDUP_gs.X_CNV_X_63716412_63735365\tG\t<CN0>,<CN2>\t.\tPASS\tAC=0,70;AF=0,0.018543;AFR_AF=0,0.0668;AMR_AF=0,0.0057;AN=3775;CS=DUP_gs;EAS_AF=0,0;END=63735365;EUR_AF=0,0;NS=2504;SAS_AF=0,0;SVTYPE=DUP\tGT\t0\nX\t63722121\tDUP_gs.X_CNV_X_63722121_63737562\tC\t<CN0>,<CN2>\t.\tPASS\tAC=0,72;AF=0,0.0190728;AFR_AF=0,0.0688;AMR_AF=0,0.0057;AN=3775;CS=DUP_gs;EAS_AF=0,0;END=63737562;EUR_AF=0,0;NS=2504;SAS_AF=0,0;SVTYPE=DUP\tGT\t0\nX\t63819125\tBI_GS_DEL1_B5_P2961_631\tC\t<CN0>\t100\tPASS\tAC=35;AF=0.0561589;AFR_AF=0.0499;AMR_AF=0.0668;AN=2542;CIEND=-1,2;CIPOS=-1,2;CS=DEL_union;EAS_AF=0.0537;END=63820418;EUR_AF=0.0614;MC=UW_VH_21328;NS=2504;SAS_AF=0.0543;SVTYPE=DEL\tGT\t.\nX\t64004962\tBI_GS_DEL1_B4_P2962_1\tG\t<CN0>\t100\tPASS\tAC=12;AF=0.00397351;AFR_AF=0.002;AMR_AF=0;AN=2542;CIEND=-2,2;CIPOS=-2,2;CS=DEL_union;EAS_AF=0.0105;END=64062235;EUR_AF=0.0052;MC=YL_CN_BEB_3701;NS=2504;SAS_AF=0.0014;SVTYPE=DEL\tGT\t.\nX\t64039290\tYL_CN_ESN_4432\tG\t<CN0>\t100\tPASS\tAC=18;AF=0.00662252;AFR_AF=0.011;AMR_AF=0.0019;AN=2542;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0.0105;END=64046207;EUR_AF=0.0052;NS=2504;SAS_AF=0.0014;SVTYPE=DEL\tGT\t.\nX\t64074221\tALU_umary_ALU_12674\tA\t<INS:ME:ALU>\t.\tPASS\tAC=14;AF=0.00370861;AFR_AF=0.012;AMR_AF=0.0038;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0;MEINFO=AluYa5a1,2,281,+;NS=2504;SAS_AF=0;SVLEN=279;SVTYPE=ALU;TSD=AAGAGTTCAGCTGGA\tGT\t0\nX\t64085142\tUW_VH_9143\tA\t<CN0>\t100\tPASS\tAC=41;AF=0.0145695;AFR_AF=0.003;AMR_AF=0.0916;AN=2542;CIEND=0,44;CIPOS=-51,0;CS=DEL_union;EAS_AF=0;END=64097518;EUR_AF=0.0052;MC=YL_CN_MXL_3748,BI_GS_DEL1_B1_P2962_59;NS=2504;SAS_AF=0;SVTYPE=DEL\tGT\t.\nX\t64100990\tDUP_gs.X_CNV_X_64100990_64109040\tA\t<CN0>,<CN2>\t.\tPASS\tAC=0,9;AF=0,0.00238411;AFR_AF=0,0.009;AMR_AF=0,0;AN=3775;CS=DUP_gs;EAS_AF=0,0;END=64109040;EUR_AF=0,0;NS=2504;SAS_AF=0,0;SVTYPE=DUP\tGT\t0\nX\t64104128\tDUP_gs.X_CNV_X_64104128_64108392\tC\t<CN0>,<CN2>\t.\tPASS\tAC=0,11;AF=0,0.00291391;AFR_AF=0,0.011;AMR_AF=0,0;AN=3775;CS=DUP_gs;EAS_AF=0,0;END=64108392;EUR_AF=0,0;NS=2504;SAS_AF=0,0;SVTYPE=DUP\tGT\t0\nX\t64109687\tUW_VH_15039\tG\t<CN0>\t100\tPASS\tAC=7;AF=0.00291391;AFR_AF=0.002;AMR_AF=0.0019;AN=2542;CIEND=0,154;CIPOS=-148,0;CS=DEL_union;EAS_AF=0.0052;END=64114033;EUR_AF=0.0039;NS=2504;SAS_AF=0.0014;SVTYPE=DEL\tGT\t.\nX\t64240820\tUW_VH_9390\tC\t<CN0>\t100\tPASS\tAC=137;AF=0.15894;AFR_AF=0.1894;AMR_AF=0.1489;AN=2542;CIEND=0,431;CIPOS=-294,0;CS=DEL_union;EAS_AF=0.1427;END=64241709;EUR_AF=0.1384;MC=BI_GS_DEL1_B2_P2962_121;NS=2504;SAS_AF=0.163;SVTYPE=DEL\tGT\t.\nX\t64284527\tBI_GS_DEL1_B3_P2962_8\tG\t<CN0>\t100\tPASS\tAC=9;AF=0.00238411;AFR_AF=0.006;AMR_AF=0;AN=2542;CIEND=-9,10;CIPOS=-9,10;CS=DEL_union;EAS_AF=0;END=64292263;EUR_AF=0.0039;MC=YL_CN_ESN_4433;NS=2504;SAS_AF=0;SVTYPE=DEL\tGT\t.\nX\t64379708\tBI_GS_DEL1_B2_P2962_192\tC\t<CN0>\t100\tPASS\tAC=13;AF=0.00609272;AFR_AF=0.004;AMR_AF=0.0038;AN=2542;CIEND=-9,9;CIPOS=-9,9;CS=DEL_union;EAS_AF=0.0052;END=64383550;EUR_AF=0.017;MC=YL_CN_KHV_5027;NS=2504;SAS_AF=0;SVTYPE=DEL\tGT\t.\nX\t64393277\tYL_CN_CLM_3864\tT\t<CN0>\t100\tPASS\tAC=5;AF=0.0015894;AFR_AF=0.002;AMR_AF=0.0019;AN=2542;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0;END=64421874;EUR_AF=0.0039;MC=BI_GS_DEL1_B2_P2962_198;NS=2504;SAS_AF=0;SVTYPE=DEL\tGT\t.\nX\t64433941\tL1_umary_LINE1_3066\tT\t<INS:ME:LINE1>\t.\tPASS\tAC=1;AF=0.0002649;AFR_AF=0;AMR_AF=0;AN=3775;CS=L1_umary;EAS_AF=0.0013;EUR_AF=0;MEINFO=LINE1,1444,6017,+;NS=2504;SAS_AF=0;SVLEN=4573;SVTYPE=LINE1;TSD=null\tGT\t0\nX\t64487672\tALU_umary_ALU_12675\tT\t<INS:ME:ALU>\t.\tPASS\tAC=3;AF=0.0007947;AFR_AF=0;AMR_AF=0.0019;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0.0026;MEINFO=AluYb7_4,28,281,+;NS=2504;SAS_AF=0;SVLEN=253;SVTYPE=ALU;TSD=null\tGT\t0\nX\t64506973\tDEL_pindel_53772\tTCCCAACACCCCACTCCCAGAATTAGACAGATTATCTAGACAGAACATCAATAAGAAAAAAATCAGATTTAAACTGCACTTTTGGCCAAGTGAACC\tT\t.\tPASS\tAC=127;AF=0.0336424;AFR_AF=0.0219;AMR_AF=0.0344;AN=3775;CS=DEL_pindel;EAS_AF=0.0353;END=64507068;EUR_AF=0.0574;NS=2504;SAS_AF=0.0223;SVTYPE=DEL\tGT\t0\nX\t64589620\tBI_GS_DEL1_B2_P2962_283\tT\t<CN0>\t100\tPASS\tAC=8;AF=0.00370861;AFR_AF=0.003;AMR_AF=0.0038;AN=2542;CIEND=-47,48;CIPOS=-47,48;CS=DEL_union;EAS_AF=0.0026;END=64593101;EUR_AF=0.0078;NS=2504;SAS_AF=0.0014;SVTYPE=DEL\tGT\t.\nX\t64615650\tDEL_pindel_53773\tCCTCTTTGTACCTCTGGTAGAATTTGGCTGTGAATCTGTCTGGTCCTGGCCTTT\tC\t.\tPASS\tAC=760;AF=0.201324;AFR_AF=0.1685;AMR_AF=0.208;AN=3775;CS=DEL_pindel;EAS_AF=0.2147;END=64615703;EUR_AF=0.1932;NS=2504;SAS_AF=0.2368;SVTYPE=DEL\tGT\t1\nX\t64802874\tBI_GS_DEL1_B5_P2962_613\tA\t<CN0>\t100\tPASS\tAC=4;AF=0.0013245;AFR_AF=0.002;AMR_AF=0;AN=2542;CIEND=-31,32;CIPOS=-31,32;CS=DEL_union;EAS_AF=0;END=64808545;EUR_AF=0.0026;MC=YL_CN_GIH_3439;NS=2504;SAS_AF=0.0014;SVTYPE=DEL\tGT\t.\nX\t64842924\tUW_VH_7698\tT\t<CN0>\t100\tPASS\tAC=198;AF=0.182781;AFR_AF=0.2283;AMR_AF=0.1431;AN=2542;CIEND=0,294;CIPOS=-270,0;CS=DEL_union;EAS_AF=0.195;END=64844507;EUR_AF=0.1449;MC=BI_GS_DEL1_B5_P2962_640;NS=2504;SAS_AF=0.1755;SVTYPE=DEL\tGT\t.\nX\t64905469\tDUP_gs.X_CNV_X_64905469_64921930\tT\t<CN0>,<CN2>\t.\tPASS\tAC=0,1;AF=0,0.0002649;AFR_AF=0,0;AMR_AF=0,0;AN=3775;CS=DUP_gs;EAS_AF=0,0;END=64921930;EUR_AF=0,0;NS=2504;SAS_AF=0,0.0014;SVTYPE=DUP\tGT\t0\nX\t65020867\tYL_CN_FIN_4309\tA\t<CN0>\t100\tPASS\tAC=9;AF=0.00291391;AFR_AF=0.002;AMR_AF=0.0019;AN=2542;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0;END=65044217;EUR_AF=0.0104;NS=2504;SAS_AF=0;SVTYPE=DEL\tGT\t.\nX\t65067869\tDUP_gs.X_CNV_X_65067869_65093100\tT\t<CN0>,<CN2>\t.\tPASS\tAC=0,1;AF=0,0.0002649;AFR_AF=0,0;AMR_AF=0,0;AN=3775;CS=DUP_gs;EAS_AF=0,0.0013;END=65093100;EUR_AF=0,0;NS=2504;SAS_AF=0,0;SVTYPE=DUP\tGT\t0\nX\t65079528\tDEL_pindel_53783\tGGTTCTGCTCAAATGTCACCTCCTCAAGTAAGCTCTCCCTGACCTGCCCTCCCTCTTACTGCTCCTGAGTCAAAGCTCGTTCTGT\tG\t.\tPASS\tAC=62;AF=0.0164238;AFR_AF=0.0179;AMR_AF=0.0191;AN=3775;CS=DEL_pindel;EAS_AF=0.0157;END=65079612;EUR_AF=0.0117;NS=2504;SAS_AF=0.0181;SVTYPE=DEL\tGT\t0\nX\t65113960\tUW_VH_8148\tA\t<CN0>\t100\tPASS\tAC=344;AF=0.295894;AFR_AF=0.4138;AMR_AF=0.2653;AN=2542;CIEND=0,225;CIPOS=-401,0;CS=DEL_union;EAS_AF=0.2147;END=65114553;EUR_AF=0.2559;MC=BI_GS_DEL1_B4_P2963_19;NS=2504;SAS_AF=0.2827;SVTYPE=DEL\tGT\t.\nX\t65113961\tDEL_pindel_53784\tGACTCACTTGAGGAGGCAGTCTGTCCATTGTTGGAGCTCAAACGCCATGCTGGGAGAACCACTTCTCTCTTCCGAGCTGTCAGGCAGGGACATCTAAGTCTGCAGAAGCTGTCTGCTGCCTTTTGTACAGATATGCCCTGCCCCCAGAGGTGGAATCTAGAGAGGCAGTAGGCCTTGCTGAGCTGTGGTGGGCTCCACCCAGTTTGAGCTTCCCTGCCACTTTGTTTACACCGTGAGCATAGAACTGCCTACTCAAGCGTGAGTAATAGTGGATGCCCCTCCCCTGCCAAGCTCCAGTGTCACAGGTCAATCTCAGACTGCTGCGCTAGCACCAAGCAAGGCTCCGTGGGTGTGGGACCTGCCGAGCCAGGCATGGGGAGGGAATCTCCAAATCTGCTGGTTGCGAAGACCCCTGGGAAAAGTGCAGTATTTGTGCAGGAGTGTACCATTCCTCC\tG\t.\tPASS\tAC=1392;AF=0.368742;AFR_AF=0.4965;AMR_AF=0.3244;AN=3775;CS=DEL_pindel;EAS_AF=0.3102;END=65114415;EUR_AF=0.2963;NS=2504;SAS_AF=0.3621;SVTYPE=DEL\tGT\t1\nX\t65542317\tBI_GS_DEL1_B5_P2963_454\tA\t<CN0>\t100\tPASS\tAC=9;AF=0.00264901;AFR_AF=0.003;AMR_AF=0.0019;AN=2542;CIEND=-23,23;CIPOS=-23,23;CS=DEL_union;EAS_AF=0;END=65551912;EUR_AF=0.0052;MC=EM_DL_DEL105211,YL_CN_PJL_5054;NS=2504;SAS_AF=0.0028;SVTYPE=DEL\tGT\t.\nX\t65578913\tUW_VH_17629\tT\t<CN0>\t100\tPASS\tAC=7;AF=0.00264901;AFR_AF=0.003;AMR_AF=0.0019;AN=2542;CIEND=0,131;CIPOS=-55,0;CS=DEL_union;EAS_AF=0.0026;END=65582755;EUR_AF=0.0052;NS=2504;SAS_AF=0;SVTYPE=DEL\tGT\t.\nX\t65664331\tDEL_pindel_53791\tTAATATATTTTATCTATATATAATACTTTCATCAAGCAAGTACAATACTAGATACATGGAGAAGTCCTGAGCTG\tT\t.\tPASS\tAC=895;AF=0.237086;AFR_AF=0.2114;AMR_AF=0.2328;AN=3775;CS=DEL_pindel;EAS_AF=0.2395;END=65664404;EUR_AF=0.2415;NS=2504;SAS_AF=0.2688;SVTYPE=DEL\tGT\t1\nX\t65771494\tDUP_gs.X_CNV_X_65771494_65864920\tG\t<CN0>,<CN2>\t.\tPASS\tAC=0,2;AF=0,0.0005298;AFR_AF=0,0;AMR_AF=0,0.0019;AN=3775;CS=DUP_gs;EAS_AF=0,0;END=65864920;EUR_AF=0,0.0013;NS=2504;SAS_AF=0,0;SVTYPE=DUP\tGT\t0\nX\t65772935\tDUP_gs.X_CNV_X_65772935_65794679\tG\t<CN0>,<CN2>\t.\tPASS\tAC=0,3;AF=0,0.0007947;AFR_AF=0,0;AMR_AF=0,0.0038;AN=3775;CS=DUP_gs;EAS_AF=0,0;END=65794679;EUR_AF=0,0.0013;NS=2504;SAS_AF=0,0;SVTYPE=DUP\tGT\t0\nX\t65777788\tDUP_gs.X_CNV_X_65777788_65785930\tT\t<CN0>,<CN2>\t.\tPASS\tAC=0,4;AF=0,0.0010596;AFR_AF=0,0;AMR_AF=0,0.0038;AN=3775;CS=DUP_gs;EAS_AF=0,0.0013;END=65785930;EUR_AF=0,0.0013;NS=2504;SAS_AF=0,0;SVTYPE=DUP\tGT\t0\nX\t65786559\tBI_GS_DEL1_B3_P2963_26\tC\t<CN0>\t100\tPASS\tAC=5;AF=0.00741722;AFR_AF=0.009;AMR_AF=0.0076;AN=2542;CIEND=-26,26;CIPOS=-26,26;CS=DEL_union;EAS_AF=0.0065;END=65789636;EUR_AF=0.0039;MC=YL_CN_GWD_5864;NS=2504;SAS_AF=0.0097;SVTYPE=DEL\tGT\t.\nX\t65806480\tDUP_gs.X_CNV_X_65806480_65827290\tT\t<CN0>,<CN2>\t.\tPASS\tAC=0,3;AF=0,0.0007947;AFR_AF=0,0.001;AMR_AF=0,0.0019;AN=3775;CS=DUP_gs;EAS_AF=0,0;END=65827290;EUR_AF=0,0.0013;NS=2504;SAS_AF=0,0;SVTYPE=DUP\tGT\t0\nX\t65820729\tDUP_gs.X_CNV_X_65820729_65872395\tA\t<CN0>,<CN2>\t.\tPASS\tAC=0,3;AF=0,0.0007947;AFR_AF=0,0;AMR_AF=0,0.0019;AN=3775;CS=DUP_gs;EAS_AF=0,0.0013;END=65872395;EUR_AF=0,0.0013;NS=2504;SAS_AF=0,0;SVTYPE=DUP\tGT\t0\nX\t65916848\tDEL_pindel_53798\tCAAGATGTTTATATCAACCCAGATTCTGGTCCATAAACAAGAAGTCTCTTCCTGCATTGTTCAAAGA\tC\t.\tPASS\tAC=6;AF=0.0015894;AFR_AF=0.006;AMR_AF=0;AN=3775;CS=DEL_pindel;EAS_AF=0;END=65916914;EUR_AF=0;NS=2504;SAS_AF=0;SVTYPE=DEL\tGT\t0\nX\t65918627\tDEL_pindel_53800\tCCAAATAGAGAAAGTGACAAAATTGTTTTTGTGTAAATTATTTTCATCTTGGGCATTTTTTACACTTATGCCT\tC\t.\tPASS\tAC=1303;AF=0.345166;AFR_AF=0.4018;AMR_AF=0.3263;AN=3775;CS=DEL_pindel;EAS_AF=0.3154;END=65918699;EUR_AF=0.3094;NS=2504;SAS_AF=0.3496;SVTYPE=DEL\tGT\t1\nX\t65936095\tDUP_gs.X_CNV_X_65936095_65960056\tG\t<CN0>,<CN2>\t.\tPASS\tAC=0,12;AF=0,0.00317881;AFR_AF=0,0;AMR_AF=0,0;AN=3775;CS=DUP_gs;EAS_AF=0,0.0157;END=65960056;EUR_AF=0,0;NS=2504;SAS_AF=0,0;SVTYPE=DUP\tGT\t0\nX\t65967173\tDEL_pindel_53801\tTAAACGTATGTCTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCCGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC\tT\t.\tPASS\tAC=1199;AF=0.317616;AFR_AF=0.321;AMR_AF=0.3206;AN=3775;CS=DEL_pindel;EAS_AF=0.301;END=65967515;EUR_AF=0.2963;MEINFO=AluYa5,1,281,-;NS=2504;SAS_AF=0.351;SVTYPE=DEL_ALU\tGT\t1\nX\t66028246\tDEL_pindel_53802\tAATACAGCTAAAACATCACAAGAAAAAAAACTATATTTCAATATCCCTGATGAATTTAGACGTAAGAATCCTCAAGAAAACACTAGCAAATCAAATGTAATGACACAGTAAAAGAATCATATGCCATGGCCAAGTATGATTGATTTCTAGGATGCAAGAATGGTTCAACATAGAAAAATCAATTAATGTAATATGCCACATTAACAGAATAAAGGTTAAAAATTACATGATCATCTCAATAGATGCAGAAAAAACATTTGACAAAATTCAACATCATTTTATGATAGAAACTCTAAACAAAATAGAAATATAAATAAATTACCTCAACATAATAGAAACAATATATTTAAAGCCCATAGTTAGCATCATATTCAATGATGAAAAACTGAAAGCTCTTCCTCTAAGATCAGGAATAAGACAGGAATGTCCACTCTCACCAATTCTATTCAACATAGTACTGAAAGTCCTTGCCAGAGCAATTCAGCAATAAAAACAAAGCCATCCAAGTAAGAAAGGAAGAGGTAGTATTATCTCCACTGATGACATAACTTTATATGTAAAATACCCTAAAGACTCTACAAACTATTTGGGCTAATAAACAAGTTCAGTAAAGTTGCAGGACACAAAATCAACATACAAAAGTCAATTGTGTTTCTACACAATAATGACAAACTATCTAACAAGGAAATTAGGAAAACAATCCCATTTATAATAGCACTAAAATAATAAAATATTTGATAATAAAATTAAATAAGAAGGTGAAATACTTGTTTACTAAGAACTACAAAATATTAATAAAGAATTGAAGAGGACACAAACAGAAAGAC\tA\t.\tPASS\tAC=861;AF=0.228079;AFR_AF=0.1745;AMR_AF=0.2271;AN=3775;CS=DEL_pindel;EAS_AF=0.2421;END=66029072;EUR_AF=0.2376;NS=2504;SAS_AF=0.2786;SVTYPE=DEL\tGT\t0\nX\t66048235\tDEL_pindel_53804\tATGACGGGATTAAGAGATTAAAGTAAAGACAGGCATAGGAAATCACAAGAGTATTGACTGGGGAAG\tA\t.\tPASS\tAC=1060;AF=0.280795;AFR_AF=0.2672;AMR_AF=0.2729;AN=3775;CS=DEL_pindel;EAS_AF=0.284;END=66048300;EUR_AF=0.2794;NS=2504;SAS_AF=0.3036;SVTYPE=DEL\tGT\t1\nX\t66053601\tBI_GS_DEL1_B3_P2964_1\tA\t<CN0>\t100\tPASS\tAC=10;AF=0.00264901;AFR_AF=0.005;AMR_AF=0.0019;AN=2542;CIEND=-6,7;CIPOS=-6,7;CS=DEL_union;EAS_AF=0.0013;END=66060370;EUR_AF=0.0039;MC=YL_CN_GWD_5865;NS=2504;SAS_AF=0;SVTYPE=DEL\tGT\t.\nX\t66064302\tBI_GS_DEL1_B4_P2964_11\tT\t<CN0>\t100\tPASS\tAC=7;AF=0.00211921;AFR_AF=0.003;AMR_AF=0.0019;AN=2542;CIEND=-44,45;CIPOS=-44,45;CS=DEL_union;EAS_AF=0;END=66074634;EUR_AF=0.0039;MC=YL_CN_ITU_4697;NS=2504;SAS_AF=0.0014;SVTYPE=DEL\tGT\t.\nX\t66103777\tDEL_pindel_53808\tTCTTTCTGTCTGAAATGCTCTCAGTCCCTGCCCCTGACAGCTTTATTGCTCACTCCTTCCTCTCCTTCAAATATTTGTTCAAGTAAAACCTACTGAGACTTAACCACCCTATTTAATATTGCAAA\tT\t.\tPASS\tAC=2298;AF=0.608742;AFR_AF=0.349;AMR_AF=0.6794;AN=3775;CS=DEL_pindel;EAS_AF=0.7605;END=66103901;EUR_AF=0.6697;NS=2504;SAS_AF=0.6936;SVTYPE=DEL\tGT\t1\nX\t66107357\tBI_GS_DEL1_B4_P2964_27\tT\t<CN0>\t100\tPASS\tAC=10;AF=0.00291391;AFR_AF=0.002;AMR_AF=0.0019;AN=2542;CIEND=-1,2;CIPOS=-1,2;CS=DEL_union;EAS_AF=0.0013;END=66113165;EUR_AF=0.0091;MC=YL_CN_CEU_5431;NS=2504;SAS_AF=0;SVTYPE=DEL\tGT\t.\nX\t66150902\tDUP_gs.X_CNV_X_66150902_66190048\tC\t<CN0>,<CN2>\t.\tPASS\tAC=0,3;AF=0,0.0007947;AFR_AF=0,0.003;AMR_AF=0,0;AN=3775;CS=DUP_gs;EAS_AF=0,0;END=66190048;EUR_AF=0,0;NS=2504;SAS_AF=0,0;SVTYPE=DUP\tGT\t0\nX\t66180881\tYL_CN_JPT_4722\tC\t<CN0>\t100\tPASS\tAC=7;AF=0.0018543;AFR_AF=0.003;AMR_AF=0;AN=2542;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0.0013;END=66186339;EUR_AF=0.0039;NS=2504;SAS_AF=0;SVTYPE=DEL\tGT\t.\nX\t66318264\tALU_umary_ALU_12676\tT\t<INS:ME:ALU>\t.\tPASS\tAC=3;AF=0.0007947;AFR_AF=0;AMR_AF=0;AN=3775;CS=ALU_umary;EAS_AF=0.0039;EUR_AF=0;MEINFO=AluUndef,1,281,-;NS=2504;SAS_AF=0;SVLEN=280;SVTYPE=ALU;TSD=null\tGT\t0\nX\t66333799\tDEL_pindel_53813\tTAAATGCTGGACTACTTGCTACACTGGTCACATTCTGCTTTGTGCCCAAATCAGCTGGATATTACTGCATCTCCTCTACTAAGCAGGGAACTCCTCAGAGGTGGAGGTTGTGCCTGATTCCTCTCTGTTCCCCACAGCACAGTGAAACGCTCATTCCTATAACTGAAGCTCCAG\tT\t.\tPASS\tAC=2218;AF=0.58755;AFR_AF=0.3619;AMR_AF=0.6718;AN=3775;CS=DEL_pindel;EAS_AF=0.6715;END=66333972;EUR_AF=0.6841;NS=2504;SAS_AF=0.649;SVTYPE=DEL\tGT\t1\nX\t66412590\tDUP_gs.X_CNV_X_66412590_66443395\tA\t<CN0>,<CN2>\t.\tPASS\tAC=0,1;AF=0,0.0002649;AFR_AF=0,0;AMR_AF=0,0;AN=3775;CS=DUP_gs;EAS_AF=0,0.0013;END=66443395;EUR_AF=0,0;NS=2504;SAS_AF=0,0;SVTYPE=DUP\tGT\t0\nX\t66456716\tUW_VH_2147\tT\t<CN0>\t100\tPASS\tAC=98;AF=0.127947;AFR_AF=0.1206;AMR_AF=0.126;AN=2542;CIEND=0,286;CIPOS=-295,0;CS=DEL_union;EAS_AF=0.1152;END=66457683;EUR_AF=0.154;MC=BI_GS_DEL1_B4_P2964_72;NS=2504;SAS_AF=0.1253;SVTYPE=DEL\tGT\t.\nX\t66483120\tUW_VH_13697\tG\t<CN0>\t100\tPASS\tAC=38;AF=0.0765563;AFR_AF=0.0748;AMR_AF=0.0592;AN=2542;CIEND=0,308;CIPOS=-266,0;CS=DEL_union;EAS_AF=0.0903;END=66484333;EUR_AF=0.0875;MC=BI_GS_DEL1_B2_P2964_242,EM_DL_DEL101175669;NS=2504;SAS_AF=0.0655;SVTYPE=DEL\tGT\t.\nX\t66531901\tUW_VH_6392\tA\t<CN0>\t100\tPASS\tAC=8;AF=0.00264901;AFR_AF=0.003;AMR_AF=0;AN=2542;CIEND=0,274;CIPOS=-336,0;CS=DEL_union;EAS_AF=0.0026;END=66537807;EUR_AF=0.0039;MC=BI_GS_DEL1_B4_P2964_84;NS=2504;SAS_AF=0.0028;SVTYPE=DEL\tGT\t.\nX\t66636586\tDUP_gs.X_CNV_X_66636586_66702070\tT\t<CN0>,<CN2>\t.\tPASS\tAC=1,7;AF=0.0002649,0.0018543;AFR_AF=0,0;AMR_AF=0,0.0076;AN=3775;CS=DUP_gs;EAS_AF=0.0013,0;END=66702070;EUR_AF=0,0.0039;NS=2504;SAS_AF=0,0;SVTYPE=CNV\tGT\t0\nX\t66661663\tDUP_gs.X_CNV_X_66661663_66732568\tG\t<CN0>,<CN2>\t.\tPASS\tAC=0,7;AF=0,0.0018543;AFR_AF=0,0;AMR_AF=0,0.0076;AN=3775;CS=DUP_gs;EAS_AF=0,0;END=66732568;EUR_AF=0,0.0039;NS=2504;SAS_AF=0,0;SVTYPE=DUP\tGT\t0\nX\t66670052\tYL_CN_LWK_4216\tT\t<CN0>\t100\tPASS\tAC=7;AF=0.00211921;AFR_AF=0.003;AMR_AF=0.0019;AN=2542;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0.0013;END=66694452;EUR_AF=0.0039;NS=2504;SAS_AF=0;SVTYPE=DEL\tGT\t.\nX\t66879897\tEM_DL_DEL105233\tA\t<CN0>\t100\tPASS\tAC=8;AF=0.00211921;AFR_AF=0.003;AMR_AF=0.0019;AN=2542;CIEND=-150,150;CIPOS=-150,150;CS=DEL_union;EAS_AF=0;END=66924329;EUR_AF=0.0052;NS=2504;SAS_AF=0;SVTYPE=DEL\tGT\t.\nX\t66993442\tUW_VH_5772\tC\t<CN0>\t100\tPASS\tAC=105;AF=0.159735;AFR_AF=0.1834;AMR_AF=0.1412;AN=2542;CIEND=0,271;CIPOS=-340,0;CS=DEL_union;EAS_AF=0.1414;END=66994080;EUR_AF=0.1723;MC=BI_GS_DEL1_B1_P2964_581;NS=2504;SAS_AF=0.1462;SVTYPE=DEL\tGT\t.\nX\t67058941\tDEL_pindel_53828\tTTCTACCCCTGGGACTGTAGTGGTGATGGCCATGGGGTGAGGCTCCTCTGTCTTTGAAAAGGGGAGGGAAGAGTGGGGAGG\tT\t.\tPASS\tAC=1174;AF=0.310993;AFR_AF=0.3031;AMR_AF=0.3053;AN=3775;CS=DEL_pindel;EAS_AF=0.2932;END=67059021;EUR_AF=0.3055;NS=2504;SAS_AF=0.351;SVTYPE=DEL\tGT\t0\nX\t67080365\tUW_VH_6000\tC\t<CN0>\t100\tPASS\tAC=36;AF=0.0556291;AFR_AF=0.0429;AMR_AF=0.0458;AN=2542;CIEND=0,275;CIPOS=-276,0;CS=DEL_union;EAS_AF=0.1021;END=67082022;EUR_AF=0.0509;MC=BI_GS_DEL1_B1_P2965_38;NS=2504;SAS_AF=0.0362;SVTYPE=DEL\tGT\t.\nX\t67085421\tALU_umary_ALU_12677\tA\t<INS:ME:ALU>\t.\tPASS\tAC=2;AF=0.0005298;AFR_AF=0;AMR_AF=0;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0.0026;MEINFO=AluUndef,1,281,-;NS=2504;SAS_AF=0;SVLEN=280;SVTYPE=ALU;TSD=null\tGT\t0\nX\t67123822\tUW_VH_3025\tA\t<CN0>\t100\tPASS\tAC=692;AF=0.26649;AFR_AF=0.3699;AMR_AF=0.2061;AN=2542;CIEND=0,496;CIPOS=-396,0;CS=DEL_union;EAS_AF=0.3364;END=67130299;EUR_AF=0.1266;MC=EM_DL_DEL105239,BI_GS_DEL1_B1_P2965_64,YL_CN_GIH_3441;NS=2504;SAS_AF=0.2409;SVTYPE=DEL\tGT\t.\nX\t67135096\tDEL_pindel_53833\tCTTTCTGGAGGAGTCTTTAGGGTTTTTGAGGTGAACAATCATATCATCAGCAAACAGTGACAGTTGACTTCCTCTTCACTGGTTTGG\tC\t.\tPASS\tAC=378;AF=0.100132;AFR_AF=0.1585;AMR_AF=0.0992;AN=3775;CS=DEL_pindel;EAS_AF=0.0707;END=67135182;EUR_AF=0.0731;NS=2504;SAS_AF=0.0794;SVTYPE=DEL\tGT\t1\nX\t67141679\tDEL_pindel_53834\tCATATACACCATGGAAAACTATGCAGCCATAAAAAGAATGAGATCAGGCCCTTTGCAGGGACATGGATGAAGCTGGAAACCATAATTCTCAGCAAACTAACACAGG\tC\t.\tPASS\tAC=1199;AF=0.317616;AFR_AF=0.318;AMR_AF=0.3168;AN=3775;CS=DEL_pindel;EAS_AF=0.3089;END=67141784;EUR_AF=0.2977;NS=2504;SAS_AF=0.3482;SVTYPE=DEL\tGT\t1\nX\t67165589\tDUP_gs.X_CNV_X_67165589_67192501\tA\t<CN0>,<CN2>\t.\tPASS\tAC=0,9;AF=0,0.00238411;AFR_AF=0,0;AMR_AF=0,0.0019;AN=3775;CS=DUP_gs;EAS_AF=0,0;END=67192501;EUR_AF=0,0;NS=2504;SAS_AF=0,0.0111;SVTYPE=DUP\tGT\t0\nX\t67175728\tBI_GS_DEL1_B5_P2965_115\tC\t<CN0>\t100\tPASS\tAC=32;AF=0.0781457;AFR_AF=0.0728;AMR_AF=0.0802;AN=2542;CIEND=-53,53;CIPOS=-53,53;CS=DEL_union;EAS_AF=0.0746;END=67176842;EUR_AF=0.0822;NS=2504;SAS_AF=0.0836;SVTYPE=DEL\tGT\t.\nX\t67187590\tDUP_gs.X_CNV_X_67187590_67214120\tA\t<CN0>,<CN2>\t.\tPASS\tAC=0,4;AF=0,0.0010596;AFR_AF=0,0;AMR_AF=0,0.0019;AN=3775;CS=DUP_gs;EAS_AF=0,0;END=67214120;EUR_AF=0,0;NS=2504;SAS_AF=0,0.0042;SVTYPE=DUP\tGT\t0\nX\t67232268\tBI_GS_DEL1_B3_P2965_11\tG\t<CN0>\t100\tPASS\tAC=9;AF=0.00264901;AFR_AF=0.006;AMR_AF=0;AN=2542;CIEND=-41,41;CIPOS=-41,41;CS=DEL_union;EAS_AF=0;END=67246232;EUR_AF=0.0052;MC=YL_CN_ASW_4564;NS=2504;SAS_AF=0;SVTYPE=DEL\tGT\t.\nX\t67545427\tALU_umary_ALU_12678\tT\t<INS:ME:ALU>\t.\tPASS\tAC=142;AF=0.0376159;AFR_AF=0.1366;AMR_AF=0.0095;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0;MEINFO=AluUndef,4,250,-;NS=2504;SAS_AF=0;SVLEN=246;SVTYPE=ALU;TSD=null\tGT\t0\nX\t67578264\tDUP_gs.X_CNV_X_67578264_67634990\tG\t<CN0>,<CN2>\t.\tPASS\tAC=2,1;AF=0.0005298,0.0002649;AFR_AF=0.002,0;AMR_AF=0,0.0019;AN=3775;CS=DUP_gs;EAS_AF=0,0;END=67634990;EUR_AF=0,0;NS=2504;SAS_AF=0,0;SVTYPE=CNV\tGT\t0\nX\t67667912\tBI_GS_DEL1_B3_P2965_24\tT\t<CN0>\t100\tPASS\tAC=124;AF=0.157616;AFR_AF=0.1486;AMR_AF=0.1202;AN=2542;CIEND=-21,22;CIPOS=-21,22;CS=DEL_union;EAS_AF=0.2081;END=67670000;EUR_AF=0.1449;NS=2504;SAS_AF=0.1574;SVTYPE=DEL\tGT\t.\nX\t67736928\tDEL_pindel_53841\tTGCTGGGATTACAGGCATGAGCTACCGAACCCGACCAAATCACTCAGCAGCTGTTTTTGTTTGTTTGTTTGTTTGTTTTTGAGACGGAGTCTTGCACTGTCACCCAGGCTGGAGTGCAGTGGCACAATCTTGGCTCACTGCAACCTCTGCCACCCGGGTTCAAGCAATTCCCATGCCTCAGCCTCCCAAGTA\tT\t.\tPASS\tAC=804;AF=0.21298;AFR_AF=0.1864;AMR_AF=0.2061;AN=3775;CS=DEL_pindel;EAS_AF=0.2225;END=67737119;EUR_AF=0.2245;NS=2504;SAS_AF=0.2326;SVTYPE=DEL\tGT\t1\nX\t67766474\tDUP_gs.X_CNV_X_67766474_67772799\tT\t<CN0>,<CN2>\t.\tPASS\tAC=0,7;AF=0,0.0018543;AFR_AF=0,0;AMR_AF=0,0;AN=3775;CS=DUP_gs;EAS_AF=0,0.0092;END=67772799;EUR_AF=0,0;MC=DUP_gs.X_CNV_X_67766825_67774077;NS=2504;SAS_AF=0,0;SVTYPE=DUP\tGT\t0\nX\t67815297\tDEL_pindel_53843\tCTTTTCTTTTCTTTTCTTTCTTCTTTCTTTCTCTATTTCTTTCTTTCCTTTTTTTTTT\tC\t.\tPASS\tAC=1016;AF=0.269139;AFR_AF=0.2602;AMR_AF=0.2672;AN=3775;CS=DEL_pindel;EAS_AF=0.267;END=67815354;EUR_AF=0.248;NS=2504;SAS_AF=0.3078;SVTYPE=DEL\tGT\t1\nX\t67827481\tDUP_gs.X_CNV_X_67827481_67876995\tT\t<CN0>,<CN2>\t.\tPASS\tAC=0,1;AF=0,0.0002649;AFR_AF=0,0;AMR_AF=0,0;AN=3775;CS=DUP_gs;EAS_AF=0,0.0013;END=67876995;EUR_AF=0,0;NS=2504;SAS_AF=0,0;SVTYPE=DUP\tGT\t0\nX\t67841422\tBI_GS_DEL1_B3_P2965_27\tC\t<CN0>\t100\tPASS\tAC=14;AF=0.0188079;AFR_AF=0.0289;AMR_AF=0.0191;AN=2542;CIEND=-10,11;CIPOS=-10,11;CS=DEL_union;EAS_AF=0.0144;END=67843680;EUR_AF=0.0222;NS=2504;SAS_AF=0.0056;SVTYPE=DEL\tGT\t.\nX\t67875701\tBI_GS_DEL1_B4_P2965_95\tA\t<CN0>\t100\tPASS\tAC=18;AF=0.0466225;AFR_AF=0.0429;AMR_AF=0.0496;AN=2542;CIEND=0,1;CIPOS=0,1;CS=DEL_union;EAS_AF=0.0301;END=67877292;EUR_AF=0.0666;NS=2504;SAS_AF=0.046;SVTYPE=DEL\tGT\t.\nX\t67898559\tBI_GS_DEL1_B3_P2965_30\tG\t<CN0>\t100\tPASS\tAC=9;AF=0.00264901;AFR_AF=0.005;AMR_AF=0;AN=2542;CIEND=-26,27;CIPOS=-26,27;CS=DEL_union;EAS_AF=0;END=67903078;EUR_AF=0.0065;MC=YL_CN_GWD_5869,EM_DL_DEL105252;NS=2504;SAS_AF=0;SVTYPE=DEL\tGT\t.\nX\t67934875\tDEL_pindel_53851\tTCTTGGGCCTGCTATCTCCCATGGACCTGCCTTACTGACTGACAGAGTTCTTTGGGTCCAGCTCAGCCCTCTAGGC\tT\t.\tPASS\tAC=1156;AF=0.306225;AFR_AF=0.3031;AMR_AF=0.3034;AN=3775;CS=DEL_pindel;EAS_AF=0.2866;END=67934950;EUR_AF=0.2963;NS=2504;SAS_AF=0.344;SVTYPE=DEL\tGT\t1\nX\t68045255\tDEL_pindel_53852\tCACACACTCCTTTCCACAGCCTTGGTATATCAGTGTGGCCTAGTTTACATCCTGACTTTTCCACTTCCTGGCTGGGTGGCCTTAGGTGAGTTATTTCACCTCTCTGTGTCTCAGAGTGCAAGGCAGGCAGGGAGAAGTCAAGGACAAGGGCCACAGAAATAGAAAGGTGTGTGCATGTTCAT\tC\t.\tPASS\tAC=1219;AF=0.322914;AFR_AF=0.3071;AMR_AF=0.3607;AN=3775;CS=DEL_pindel;EAS_AF=0.3115;END=68045436;EUR_AF=0.3029;NS=2504;SAS_AF=0.351;SVTYPE=DEL\tGT\t1\nX\t68319997\tUW_VH_13090\tT\t<CN0>\t100\tPASS\tAC=13;AF=0.0312583;AFR_AF=0.0229;AMR_AF=0.0458;AN=2542;CIEND=0,253;CIPOS=-269,0;CS=DEL_union;EAS_AF=0.0249;END=68321839;EUR_AF=0.0418;NS=2504;SAS_AF=0.0279;SVTYPE=DEL\tGT\t.\nX\t68330681\tL1_umary_LINE1_3069\tA\t<INS:ME:LINE1>\t.\tPASS\tAC=7;AF=0.0018543;AFR_AF=0.007;AMR_AF=0;AN=3775;CS=L1_umary;EAS_AF=0;EUR_AF=0;MEINFO=LINE1,2724,5262,-;NS=2504;SAS_AF=0;SVLEN=2538;SVTYPE=LINE1;TSD=null\tGT\t0\nX\t68561459\tEM_DL_DEL105263\tT\t<CN0>\t100\tPASS\tAC=7;AF=0.00291391;AFR_AF=0.003;AMR_AF=0.0019;AN=2542;CIEND=-150,150;CIPOS=-150,150;CS=DEL_union;EAS_AF=0.0052;END=68565338;EUR_AF=0.0026;NS=2504;SAS_AF=0.0014;SVTYPE=DEL\tGT\t.\nX\t68807480\tBI_GS_DEL1_B1_P2966_571\tA\t<CN0>\t100\tPASS\tAC=9;AF=0.00238411;AFR_AF=0.003;AMR_AF=0.0019;AN=2542;CIEND=-5,6;CIPOS=-5,6;CS=DEL_union;EAS_AF=0.0013;END=68815695;EUR_AF=0.0052;NS=2504;SAS_AF=0;SVTYPE=DEL\tGT\t.\nX\t68861391\tL1_umary_LINE1_3070\tT\t<INS:ME:LINE1>\t.\tPASS\tAC=2;AF=0.0005298;AFR_AF=0.002;AMR_AF=0;AN=3775;CS=L1_umary;EAS_AF=0;EUR_AF=0;MEINFO=LINE1,1886,5971,-;NS=2504;SAS_AF=0;SVLEN=4085;SVTYPE=LINE1;TSD=null\tGT\t0\nX\t68874026\tBI_GS_DEL1_B3_P2966_25\tA\t<CN0>\t100\tPASS\tAC=9;AF=0.00264901;AFR_AF=0.006;AMR_AF=0.0019;AN=2542;CIEND=-46,47;CIPOS=-46,47;CS=DEL_union;EAS_AF=0;END=68885739;EUR_AF=0.0039;MC=YL_CN_ESN_4438;NS=2504;SAS_AF=0;SVTYPE=DEL\tGT\t.\nX\t69003638\tBI_GS_DEL1_B4_P2967_1\tT\t<CN0>\t100\tPASS\tAC=7;AF=0.00211921;AFR_AF=0.002;AMR_AF=0;AN=2542;CIEND=-13,14;CIPOS=-13,14;CS=DEL_union;EAS_AF=0.0013;END=69020483;EUR_AF=0.0052;MC=YL_CN_CHB_4676;NS=2504;SAS_AF=0.0014;SVTYPE=DEL\tGT\t.\nX\t69011306\tDUP_gs.X_CNV_X_69011306_69020131\tC\t<CN0>,<CN2>\t.\tPASS\tAC=2,1;AF=0.0005298,0.0002649;AFR_AF=0,0;AMR_AF=0,0;AN=3775;CS=DUP_gs;EAS_AF=0.0013,0;END=69020131;EUR_AF=0,0.0013;NS=2504;SAS_AF=0.0014,0;SVTYPE=CNV\tGT\t0\nX\t69023049\tUW_VH_5952\tG\t<CN0>\t100\tPASS\tAC=27;AF=0.0127152;AFR_AF=0.004;AMR_AF=0.0038;AN=2542;CIEND=0,359;CIPOS=-369,0;CS=DEL_union;EAS_AF=0.0406;END=69026269;EUR_AF=0.0104;MC=BI_GS_DEL1_B5_P2967_14,YL_CN_CDX_3845,YL_CN_JPT_4725;NS=2504;SAS_AF=0.0042;SVTYPE=DEL\tGT\t.\nX\t69200591\tDEL_pindel_53866\tCCTCCCATCATCTCTGCACATGAAGTGGAAGTTACTCTCATTTTACATATAGACACAGATAACAACCTCAGATATGTTAAATAACTTGAGTAGAGTTACAGGTGGTGTGGAAAGATAAGAACAAAAATAAAGTCTTCCTTGTCTTATTTTGCCCCTCTGGGCAGGTGTTCATTTTGTCTTTTTGATGCTTCCAGTATCTGTGTTGACCTTTTCTTGCCTGAGCCTTGGGCAGGCTGGGCTTTCTGTAGAGCTACTTGACTGGAAGCTTTTTCTAGCCACAAGCATTCCACTGGGGTTGTGGGGGCATCTGCTCACTTTACTGTCTCTTGGTAGAAAAGCTTAAAGTGAATTTTTAAAGTGAAAGTTTAGAATCTTAGTAAAGCTATAAGACATAGACCCAACCCCAAACTGCTGTCTCAGTGGGGTTCATCTCTCTTTACCGCTAGATCCTTTTATGTCAGTAGGATAGGACCTTGGACATTATTGCCAGTGGTATACAGTATCACTATGGTATGACTGAAAGTTTGAGTACTATTTCTACACTCCTGTACCACAAAAGCAATCTCATACTATAGAAACAAACCTGTACTGTAGAATAGAAGAGAATTGAGCAGGAAATGTTTAGTTTGCATTGCAAACTTTTTTATTTTTTGTTTTTTTCTCACTTTTAGCATCTTGGGCTTCTATTCTGGGGATTAGAGATAGTAAGTAATTATAATATCAAGATGAGATGACAATATCATTCTTTTTCTGTTCCAAGTGAATGATGGCTCTTTGGCCCATAAGCTG\tC\t.\tPASS\tAC=521;AF=0.138013;AFR_AF=0.1286;AMR_AF=0.1679;AN=3775;CS=DEL_pindel;EAS_AF=0.1335;END=69201379;EUR_AF=0.1253;NS=2504;SAS_AF=0.1476;SVTYPE=DEL\tGT\t1\nX\t69239350\tDEL_pindel_53867\tCTATGCAGCACAGTAGACTGGATAAAGAAAATGTACATACATGTCATGGAATAA\tC\t.\tPASS\tAC=1168;AF=0.309404;AFR_AF=0.3151;AMR_AF=0.3015;AN=3775;CS=DEL_pindel;EAS_AF=0.2932;END=69239403;EUR_AF=0.2937;NS=2504;SAS_AF=0.3412;SVTYPE=DEL\tGT\t1\nX\t69303060\tUW_VH_1933\tC\t<CN0>\t100\tPASS\tAC=905;AF=0.49298;AFR_AF=0.321;AMR_AF=0.5115;AN=2542;CIEND=0,525;CIPOS=-473,0;CS=DEL_union;EAS_AF=0.6191;END=69303274;EUR_AF=0.5483;MC=BI_GS_DEL1_B4_P2967_32;NS=2504;SAS_AF=0.5265;SVTYPE=DEL\tGT\t.\nX\t69419904\tDUP_gs.X_CNV_X_69419904_69448773\tC\t<CN0>,<CN2>\t.\tPASS\tAC=0,7;AF=0,0.0018543;AFR_AF=0,0.007;AMR_AF=0,0;AN=3775;CS=DUP_gs;EAS_AF=0,0;END=69448773;EUR_AF=0,0;MC=DUP_gs.X_CNV_X_69419675_69458148;NS=2504;SAS_AF=0,0;SVTYPE=DUP\tGT\t0\nX\t69427429\tDUP_gs.X_CNV_X_69427429_69446696\tA\t<CN0>,<CN2>\t.\tPASS\tAC=2,7;AF=0.0005298,0.0018543;AFR_AF=0,0.007;AMR_AF=0.0019,0;AN=3775;CS=DUP_gs;EAS_AF=0,0;END=69446696;EUR_AF=0,0;NS=2504;SAS_AF=0.0014,0;SVTYPE=CNV\tGT\t0\nX\t69438219\tBI_GS_DEL1_B5_P2967_342\tT\t<CN0>\t100\tPASS\tAC=8;AF=0.00211921;AFR_AF=0.002;AMR_AF=0.0019;AN=2542;CIEND=-26,26;CIPOS=-26,26;CS=DEL_union;EAS_AF=0;END=69446728;EUR_AF=0.0039;NS=2504;SAS_AF=0.0028;SVTYPE=DEL\tGT\t.\nX\t69462122\tDUP_gs.X_CNV_X_69462122_69470996\tT\t<CN0>,<CN2>\t.\tPASS\tAC=0,12;AF=0,0.00317881;AFR_AF=0,0.005;AMR_AF=0,0;AN=3775;CS=DUP_gs;EAS_AF=0,0;END=69470996;EUR_AF=0,0.0091;NS=2504;SAS_AF=0,0;SVTYPE=DUP\tGT\t0\nX\t69731357\tBI_GS_DEL1_B1_P2967_446\tC\t<CN0>\t100\tPASS\tAC=167;AF=0.0712583;AFR_AF=0.1027;AMR_AF=0.042;AN=2542;CIEND=0,1;CIPOS=0,1;CS=DEL_union;EAS_AF=0.0681;END=69734204;EUR_AF=0.0627;MC=YL_CN_YRI_5586,EM_DL_DEL105282,UW_VH_2640,YL_CN_STU_4605,UW_VH_13557,UW_VH_7835;NS=2504;SAS_AF=0.0613;SVTYPE=DEL\tGT\t.\nX\t69842811\tDEL_pindel_53874\tTATTTGGTCATTATTCAAAATTCCAATTGCTTCATCTTTTGTTTGGTTTGTTTGAATTCCCTTCTA\tT\t.\tPASS\tAC=655;AF=0.17351;AFR_AF=0.1346;AMR_AF=0.1889;AN=3775;CS=DEL_pindel;EAS_AF=0.199;END=69842876;EUR_AF=0.1945;NS=2504;SAS_AF=0.1671;SVTYPE=DEL\tGT\t0\nX\t70034916\tBI_GS_DEL1_B4_P2968_4\tC\t<CN0>\t100\tPASS\tAC=286;AF=0.244768;AFR_AF=0.2702;AMR_AF=0.2443;AN=2542;CIEND=-20,20;CIPOS=-20,20;CS=DEL_union;EAS_AF=0.2408;END=70036229;EUR_AF=0.1736;NS=2504;SAS_AF=0.2897;SVTYPE=DEL\tGT\t.\nX\t70102169\tL1_umary_LINE1_3071\tT\t<INS:ME:LINE1>\t.\tPASS\tAC=2;AF=0.0005298;AFR_AF=0;AMR_AF=0;AN=3775;CS=L1_umary;EAS_AF=0;EUR_AF=0;MEINFO=LINE1,1,4792,-;NS=2504;SAS_AF=0.0028;SVLEN=4791;SVTYPE=LINE1;TSD=null\tGT\t0\nX\t70122996\tBI_GS_DEL1_B2_P2968_45\tA\t<CN0>\t100\tPASS\tAC=195;AF=0.130596;AFR_AF=0.0957;AMR_AF=0.0782;AN=2542;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.1754;END=70123933;EUR_AF=0.077;MC=UW_VH_1657;NS=2504;SAS_AF=0.227;SVTYPE=DEL\tGT\t.\nX\t70137290\tBI_GS_DEL1_B5_P2968_75\tA\t<CN0>\t100\tPASS\tAC=443;AF=0.181987;AFR_AF=0.1844;AMR_AF=0.2137;AN=2542;CIEND=-31,32;CIPOS=-31,32;CS=DEL_union;EAS_AF=0.0223;END=70139954;EUR_AF=0.3916;MC=YL_CN_GWD_5871,YL_CN_MXL_3753,EM_DL_DEL105290,YL_CN_TSI_4407;NS=2504;SAS_AF=0.1017;SVTYPE=DEL\tGT\t.\nX\t70434539\tDUP_gs.X_CNV_X_70434539_70438224\tT\t<CN0>,<CN2>\t.\tPASS\tAC=0,8;AF=0,0.00211921;AFR_AF=0,0.003;AMR_AF=0,0;AN=3775;CS=DUP_gs;EAS_AF=0,0.0013;END=70438224;EUR_AF=0,0;NS=2504;SAS_AF=0,0.0056;SVTYPE=DUP\tGT\t0\nX\t70543854\tBI_GS_DEL1_B4_P2968_56\tC\t<CN0>\t100\tPASS\tAC=137;AF=0.15947;AFR_AF=0.1535;AMR_AF=0.1469;AN=2542;CIEND=-4,5;CIPOS=-4,5;CS=DEL_union;EAS_AF=0.1688;END=70544799;EUR_AF=0.1384;NS=2504;SAS_AF=0.1894;SVTYPE=DEL\tGT\t.\nX\t71022532\tDUP_gs.X_CNV_X_71022532_71050874\tA\t<CN0>,<CN2>\t.\tPASS\tAC=4,4;AF=0.0010596,0.0010596;AFR_AF=0.004,0;AMR_AF=0,0;AN=3775;CS=DUP_gs;EAS_AF=0,0.0052;END=71050874;EUR_AF=0,0;NS=2504;SAS_AF=0,0;SVTYPE=CNV\tGT\t0\nX\t71064563\tDUP_gs.X_CNV_X_71064563_71157334\tG\t<CN0>,<CN2>\t.\tPASS\tAC=2,1;AF=0.0005298,0.0002649;AFR_AF=0.002,0;AMR_AF=0,0;AN=3775;CS=DUP_gs;EAS_AF=0,0.0013;END=71157334;EUR_AF=0,0;NS=2504;SAS_AF=0,0;SVTYPE=CNV\tGT\t0\nX\t71312620\tL1_umary_LINE1_3072\tT\t<INS:ME:LINE1>\t.\tPASS\tAC=130;AF=0.0344371;AFR_AF=0.1246;AMR_AF=0.0095;AN=3775;CS=L1_umary;EAS_AF=0;EUR_AF=0;MEINFO=LINE1,5596,5998,-;NS=2504;SAS_AF=0;SVLEN=402;SVTYPE=LINE1;TSD=AACTGCATTAATACTTCT\tGT\t0\nX\t71357156\tBI_GS_DEL1_B4_P2969_56\tG\t<CN0>\t100\tPASS\tAC=287;AF=0.289272;AFR_AF=0.2812;AMR_AF=0.2882;AN=2542;CIEND=-29,30;CIPOS=-29,30;CS=DEL_union;EAS_AF=0.2579;END=71357534;EUR_AF=0.2768;NS=2504;SAS_AF=0.3482;SVTYPE=DEL\tGT\t.\nX\t71408878\tBI_GS_DEL1_B1_P2969_275\tG\t<CN0>\t100\tPASS\tAC=26;AF=0.0103311;AFR_AF=0.0289;AMR_AF=0.0115;AN=2542;CIEND=-11,12;CIPOS=-11,12;CS=DEL_union;EAS_AF=0;END=71416241;EUR_AF=0.0052;MC=YL_CN_PUR_5681,UW_VH_6543;NS=2504;SAS_AF=0;SVTYPE=DEL\tGT\t.\nX\t71430729\tBI_GS_DEL1_B1_P2969_290\tA\t<CN0>\t100\tPASS\tAC=9;AF=0.00238411;AFR_AF=0.002;AMR_AF=0.0076;AN=2542;CIEND=-10,11;CIPOS=-10,11;CS=DEL_union;EAS_AF=0;END=71441329;EUR_AF=0.0039;MC=YL_CN_PUR_5682,UW_VH_9973;NS=2504;SAS_AF=0;SVTYPE=DEL\tGT\t.\nX\t71860788\tDEL_pindel_53890\tCCATAAAATATAAATAATTGATAAATATATACAGAAATGTGCAGACCCTATTAGATAAGCAAGCAATTGTAGACACATAGTTTCAAAAAAAGAGGTAAAGCAAAAATAGAAAAACGTACAGGTCCCTGGGAATTAAAGATAGAAAATTAAAATAATTTATACATACTAAAACCTACTTATCTAACAAAAATAAATAAAACTCCAATGTTAGTGGGGTAGTAAAAAAGAAAGGTATATTTTATATCTTAGTTATGTCACTATGAATTAGTTCGTCTTTGTAAATAATCATCTGGCAACATGTAACAAGAGCTAAAAAGCTGTTCACAAGCTTATCCAGAATCCCTTTACTGAGAATATACAATTAAGAAAACAGTGGTCTATACAAAGGCATTTATAGAAGGATAAAAATTCTTGAAAATATTCAGCTAATAATCAGGAAACAATTACTTTGATTTGATGAAATACTATATAGCTATTTCAATATGTGGAAATGCATCACGAGAGAATAAGTGAAAACAAACAGAACACAAGTGAATATAGGCATGTTAAAGATAACTATTAAAATGTATCTATATGCACTAAGATTAGAAAAGAATTAGCATTACATAAAGATTTGAACTTAATATTTTAAGTTCTTACTTTCACAAAGTTGATTAATCT\tC\t.\tPASS\tAC=223;AF=0.0590728;AFR_AF=0.0658;AMR_AF=0.0935;AN=3775;CS=DEL_pindel;EAS_AF=0.0864;END=71861447;EUR_AF=0.0326;NS=2504;SAS_AF=0.0237;SVTYPE=DEL\tGT\t0\nX\t72238298\tALU_umary_ALU_12679\tT\t<INS:ME:ALU>\t.\tPASS\tAC=64;AF=0.0169536;AFR_AF=0;AMR_AF=0.0153;AN=3775;CS=ALU_umary;EAS_AF=0.0733;EUR_AF=0;MEINFO=AluUndef,2,281,-;NS=2504;SAS_AF=0;SVLEN=279;SVTYPE=ALU;TSD=null\tGT\t0\nX\t72297660\tDUP_gs.X_CNV_X_72297660_72334425\tA\t<CN0>,<CN2>\t.\tPASS\tAC=0,1;AF=0,0.0002649;AFR_AF=0,0;AMR_AF=0,0.0019;AN=3775;CS=DUP_gs;EAS_AF=0,0;END=72334425;EUR_AF=0,0;NS=2504;SAS_AF=0,0;SVTYPE=DUP\tGT\t0\nX\t72343223\tL1_umary_LINE1_3073\tT\t<INS:ME:LINE1>\t.\tPASS\tAC=16;AF=0.00423841;AFR_AF=0;AMR_AF=0;AN=3775;CS=L1_umary;EAS_AF=0.0209;EUR_AF=0;MEINFO=LINE1,3249,5528,-;NS=2504;SAS_AF=0;SVLEN=2279;SVTYPE=LINE1;TSD=null\tGT\t0\nX\t72423763\tDEL_pindel_53895\tAAGAGAGAGAATGAGAACCAAGTGAAAAGGGAAATCCCTTATAAAACCATCAGATCTTG\tA\t.\tPASS\tAC=218;AF=0.0577483;AFR_AF=0.0349;AMR_AF=0.0744;AN=3775;CS=DEL_pindel;EAS_AF=0.1217;END=72423821;EUR_AF=0.0313;NS=2504;SAS_AF=0.0376;SVTYPE=DEL\tGT\t0\nX\t72581020\tDEL_pindel_53897\tTGTGTATATATATATATATATATATATATATATATATATATATATATATATTTATCACAATTTCTTCATCTAATCATTGATTGATGGGCATTTGGGCTGGTTCCATATTTTTGCAATTGCTAATTGTGCTGCTATAAACATTTGTGGAAAAGTATCTTTTTTGTATAATGACTTCTTTTCCGCTGGGTGGATATGTAGCAGTGAAGTTGCTGAATCAAATGGTAATTCTACTTTTAGTTCTTTAAGGAATCTCCACACTGTTTTCCATAGCGGTTTTACTAGTTTACATTCCCACCAGCATTGTAAATGTGTTCCCTTTTCTCCACATCCATGCCAATATCTATTATTTGTTTATTTCTTGATTATAGCCATTCTTGCAGGAATAAGGTGATATCACATTGTGGTTTTGATTTGCATTTCTCTGATAATTA\tT\t.\tPASS\tAC=853;AF=0.22596;AFR_AF=0.2124;AMR_AF=0.2004;AN=3775;CS=DEL_pindel;EAS_AF=0.2435;END=72581450;EUR_AF=0.2154;NS=2504;SAS_AF=0.2563;SVTYPE=DEL\tGT\t1\nX\t72848529\tBI_GS_DEL1_B3_P2970_16\tT\t<CN0>\t100\tPASS\tAC=9;AF=0.00291391;AFR_AF=0.007;AMR_AF=0.0019;AN=2542;CIEND=-1,2;CIPOS=-1,2;CS=DEL_union;EAS_AF=0;END=72856483;EUR_AF=0.0039;MC=YL_CN_LWK_4227;NS=2504;SAS_AF=0;SVTYPE=DEL\tGT\t.\nX\t72992805\tBI_GS_DEL1_B3_P2970_22\tG\t<CN0>\t100\tPASS\tAC=6;AF=0.0018543;AFR_AF=0.002;AMR_AF=0;AN=2542;CIEND=-2,3;CIPOS=-2,3;CS=DEL_union;EAS_AF=0;END=72998981;EUR_AF=0.0052;MC=YL_CN_BEB_3705;NS=2504;SAS_AF=0.0014;SVTYPE=DEL\tGT\t.\nX\t72997307\tDEL_pindel_53899\tGGTATTTCATATATCTACATTTCCTTGGGGTTGATTACTGGAGCTTTATTAGTCTCCTGTGGTGGTGTCATGTGTGCCTGATTTTTTTAAAATCCATGTAGCCTCATATTGATGTCTATACATTTGAATGCACAA\tG\t.\tPASS\tAC=99;AF=0.0262252;AFR_AF=0.011;AMR_AF=0.0439;AN=3775;CS=DEL_pindel;EAS_AF=0.0026;END=72997441;EUR_AF=0.064;NS=2504;SAS_AF=0.0195;SVTYPE=DEL\tGT\t0\nX\t73004974\tDUP_gs.X_CNV_X_73004974_73094907\tG\t<CN0>,<CN2>\t.\tPASS\tAC=0,1;AF=0,0.0002649;AFR_AF=0,0;AMR_AF=0,0;AN=3775;CS=DUP_gs;EAS_AF=0,0;END=73094907;EUR_AF=0,0;NS=2504;SAS_AF=0,0.0014;SVTYPE=DUP\tGT\t0\nX\t73022777\tDEL_pindel_53900\tAAGAGGAGAGATTAGGCTGGCTGTCCAATGGACACAGCTTTATTCTGGAATGGTGAGCCTAATAGGGAGGGT\tA\t.\tPASS\tAC=522;AF=0.138278;AFR_AF=0.1655;AMR_AF=0.1641;AN=3775;CS=DEL_pindel;EAS_AF=0.1479;END=73022848;EUR_AF=0.1188;NS=2504;SAS_AF=0.0919;SVTYPE=DEL\tGT\t1\nX\t73089711\tBI_GS_DEL1_B3_P2971_4\tT\t<CN0>\t100\tPASS\tAC=83;AF=0.125828;AFR_AF=0.1107;AMR_AF=0.126;AN=2542;CIEND=-14,15;CIPOS=-14,15;CS=DEL_union;EAS_AF=0.1479;END=73090785;EUR_AF=0.1292;NS=2504;SAS_AF=0.1198;SVTYPE=DEL\tGT\t.\nX\t73166080\tBI_GS_DEL1_B4_P2971_15\tT\t<CN0>\t100\tPASS\tAC=141;AF=0.0617219;AFR_AF=0.1755;AMR_AF=0.0324;AN=2542;CIEND=-22,23;CIPOS=-22,23;CS=DEL_union;EAS_AF=0.0131;END=73169831;EUR_AF=0.0235;MC=YL_CN_BEB_3706,UW_VH_10562,YL_CN_GIH_3449,UW_VH_24532;NS=2504;SAS_AF=0.0167;SVTYPE=DEL\tGT\t.\nX\t73172802\tEM_DL_DEL105335\tA\t<CN0>\t100\tPASS\tAC=30;AF=0.00980132;AFR_AF=0.003;AMR_AF=0.0496;AN=2542;CIEND=-150,150;CIPOS=-150,150;CS=DEL_union;EAS_AF=0.0039;END=73176731;EUR_AF=0.0065;MC=UW_VH_9769,YL_CN_MXL_3755;NS=2504;SAS_AF=0;SVTYPE=DEL\tGT\t.\nX\t73194117\tUW_VH_6036\tT\t<CN0>\t100\tPASS\tAC=16;AF=0.0148344;AFR_AF=0.0169;AMR_AF=0.0057;AN=2542;CIEND=0,266;CIPOS=-281,0;CS=DEL_union;EAS_AF=0.0327;END=73196661;EUR_AF=0.0091;MC=YL_CN_CHS_4742,BI_GS_DEL1_B1_P2971_114;NS=2504;SAS_AF=0.0056;SVTYPE=DEL\tGT\t.\nX\t73400777\tDEL_pindel_53907\tAGGAACCGAGGGTGGCCCACTATAGGCCCGGTCCCTCCGGTACGAGCCATGAGTCAGCTGAGCCTGAGTGCAAAGATGGACAGAAGGCCGACTGG\tA\t.\tPASS\tAC=893;AF=0.236556;AFR_AF=0.2173;AMR_AF=0.229;AN=3775;CS=DEL_pindel;EAS_AF=0.2565;END=73400871;EUR_AF=0.2141;NS=2504;SAS_AF=0.2716;SVTYPE=DEL\tGT\t1\nX\t73426252\tDEL_pindel_53909\tCATTTTTTCTACAGGTTATGATAGAATCTCATTAAATCTTGACATCTCTCCCAGGGGAAGAATATCACAGGCCAGTGGTGTGAATGGGGTATGAGATGATAGCATTTACTAAATCGGTAATCTCTTTTATGTATGTTCTTGTTATATTGAGGTTAAGAGGCAAGATGATTGGCAGCAGAATTCTTCAGGATTTTGTTTGCTGTGGTATGGATTAT\tC\t.\tPASS\tAC=302;AF=0.08;AFR_AF=0.0678;AMR_AF=0.0458;AN=3775;CS=DEL_pindel;EAS_AF=0.1165;END=73426466;EUR_AF=0.0862;NS=2504;SAS_AF=0.0766;SVTYPE=DEL\tGT\t0\nX\t73496220\tDEL_pindel_53911\tTGTTGTTGATTTTGAAACAGAGTTTCCCTCTGTCACCCAGACTGGAGTGTAATGGCACGATCTCAGCTCCCAGGCTCAAGTGATTCTCCTACTTCAGCCTCCTGAGTAGCTGCAATTACAGGCATGAGCCACCCTGTTCCACTAATTTTTGTATTTTTAGTAGAGACAGGGTTTCATCACGTTGGCCAGGCTGCTCTCGAACTCCTGACCTCCCGCCTCAGCCTCCCAAAGTGCTGGGATTAGAGGCGTGAGCCATCAGGCCTGGCCAACAACAAACTCTTTACATGCATAAACATAATAAATATGTTAAAAAAGAGAGGAGAGAAACCTACTGTGTGTACCCCATGCTCTAGATAAATGCCATACA\tT\t.\tPASS\tAC=215;AF=0.0569536;AFR_AF=0.0568;AMR_AF=0.0382;AN=3775;CS=DEL_pindel;EAS_AF=0.0903;END=73496586;EUR_AF=0.0339;NS=2504;SAS_AF=0.0599;SVTYPE=DEL\tGT\t1\nX\t73516948\tUW_VH_8149\tA\t<CN0>\t100\tPASS\tAC=21;AF=0.0349669;AFR_AF=0.0309;AMR_AF=0.0324;AN=2542;CIEND=0,310;CIPOS=-271,0;CS=DEL_union;EAS_AF=0.0353;END=73518402;EUR_AF=0.0457;MC=BI_GS_DEL1_B5_P2971_386;NS=2504;SAS_AF=0.0306;SVTYPE=DEL\tGT\t.\nX\t73550319\tDEL_pindel_53912\tGTGCGACTGTAGTCCCAGCTACTTGGGAGACTGAGACAGGAGAATTGCTTGAACCCAGGAGGCGGAAGT\tG\t.\tPASS\tAC=2146;AF=0.568477;AFR_AF=0.4975;AMR_AF=0.4542;AN=3775;CS=DEL_pindel;EAS_AF=0.9241;END=73550387;EUR_AF=0.376;NS=2504;SAS_AF=0.578;SVTYPE=DEL\tGT\t1\nX\t73816785\tBI_GS_DEL1_B2_P2971_372\tT\t<CN0>\t100\tPASS\tAC=74;AF=0.130331;AFR_AF=0.1276;AMR_AF=0.1508;AN=2542;CIEND=-6,7;CIPOS=-6,7;CS=DEL_union;EAS_AF=0.1217;END=73817680;EUR_AF=0.1332;NS=2504;SAS_AF=0.1253;SVTYPE=DEL\tGT\t.\nX\t74154573\tDEL_pindel_53919\tAGTATAGCCTCATTATCAGCAAACATGCTGGATGGGCTTTGAATTGCGTACTTGTTCTTCTGAACACTTGCTTCT\tA\t.\tPASS\tAC=229;AF=0.0606623;AFR_AF=0.0289;AMR_AF=0.0954;AN=3775;CS=DEL_pindel;EAS_AF=0.0563;END=74154647;EUR_AF=0.094;NS=2504;SAS_AF=0.0487;SVTYPE=DEL\tGT\t0\nX\t74216946\tALU_umary_ALU_12680\tT\t<INS:ME:ALU>\t.\tPASS\tAC=230;AF=0.0609271;AFR_AF=0.2154;AMR_AF=0.0267;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0;MEINFO=AluYa5,1,281,-;NS=2504;SAS_AF=0;SVLEN=280;SVTYPE=ALU;TSD=GCTTTTCTAGTTCTTTT\tGT\t0\nX\t74249631\tDEL_pindel_53921\tATACCATCTCAGACCACTCAGAATGGCTATTACTAAAAAGTCAAAAACCAATAGATGCTGGCAAGGCTTGAGAGAAAAGGTAGGTTCTTTCTATCCCCAGTTTTTTCAGAGTGATTTTTCTTTTG\tA\t.\tPASS\tAC=662;AF=0.175364;AFR_AF=0.1765;AMR_AF=0.1832;AN=3775;CS=DEL_pindel;EAS_AF=0.2107;END=74249755;EUR_AF=0.1645;NS=2504;SAS_AF=0.1421;SVTYPE=DEL\tGT\t0\nX\t74360376\tALU_umary_ALU_12681\tT\t<INS:ME:ALU>\t.\tPASS\tAC=86;AF=0.0227815;AFR_AF=0.0818;AMR_AF=0.0076;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0;MEINFO=AluUndef,6,281,-;NS=2504;SAS_AF=0;SVLEN=275;SVTYPE=ALU;TSD=AAGAGATCTTT\tGT\t0\nX\t74457229\tDUP_gs.X_CNV_X_74457229_74485658\tT\t<CN0>,<CN2>\t.\tPASS\tAC=0,3;AF=0,0.0007947;AFR_AF=0,0;AMR_AF=0,0;AN=3775;CS=DUP_gs;EAS_AF=0,0;END=74485658;EUR_AF=0,0.0039;NS=2504;SAS_AF=0,0;SVTYPE=DUP\tGT\t0\nX\t74464226\tDEL_pindel_53922\tTTCTTTACAGAAATAGAAGAAACTATTTTAAGTTTCATATGGAACTGAAAAAGAGCCAGAGTACCCAAGGCAATCTTAAGCAAAAAGAAAAAAGGCATCACATTACCTGACTTCAAACTATACTAAAAGGCTACAGTAACCAAAATAGCATGATACTGATAC\tT\t.\tPASS\tAC=558;AF=0.147815;AFR_AF=0.1356;AMR_AF=0.1603;AN=3775;CS=DEL_pindel;EAS_AF=0.1518;END=74464387;EUR_AF=0.1554;NS=2504;SAS_AF=0.1435;SVTYPE=DEL\tGT\t1\nX\t74480626\tDUP_gs.X_CNV_X_74480626_74530298\tA\t<CN0>,<CN2>\t.\tPASS\tAC=0,3;AF=0,0.0007947;AFR_AF=0,0;AMR_AF=0,0;AN=3775;CS=DUP_gs;EAS_AF=0,0;END=74530298;EUR_AF=0,0.0039;NS=2504;SAS_AF=0,0;SVTYPE=DUP\tGT\t0\nX\t74599737\tDEL_pindel_53924\tCAGTCAGTGTGAGTTATCCTTGCCACAGAAGGCTGCAAGCTCTCATGCCACTGAGTTAAACAGG\tC\t.\tPASS\tAC=2329;AF=0.616954;AFR_AF=0.4975;AMR_AF=0.6641;AN=3775;CS=DEL_pindel;EAS_AF=0.6911;END=74599800;EUR_AF=0.6919;NS=2504;SAS_AF=0.5905;SVTYPE=DEL\tGT\t0\nX\t74885259\tALU_umary_ALU_12682\tC\t<INS:ME:ALU>\t.\tPASS\tAC=34;AF=0.00900662;AFR_AF=0.0319;AMR_AF=0.0038;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0;MEINFO=AluYb8,8,272,+;NS=2504;SAS_AF=0;SVLEN=264;SVTYPE=ALU;TSD=null\tGT\t0\nX\t74889445\tDUP_gs.X_CNV_X_74889445_74904218\tA\t<CN0>,<CN2>\t.\tPASS\tAC=0,1;AF=0,0.0002649;AFR_AF=0,0;AMR_AF=0,0;AN=3775;CS=DUP_gs;EAS_AF=0,0;END=74904218;EUR_AF=0,0.0013;NS=2504;SAS_AF=0,0;SVTYPE=DUP\tGT\t0\nX\t75111521\tDEL_pindel_53930\tGATAGAAAGAATATGGTTAGATGTGGTGGCTCACCCCTGTAATCCCAAAACTTTGGGAGGCCA\tG\t.\tPASS\tAC=1123;AF=0.297483;AFR_AF=0.2911;AMR_AF=0.2939;AN=3775;CS=DEL_pindel;EAS_AF=0.2945;END=75111583;EUR_AF=0.2872;NS=2504;SAS_AF=0.3231;SVTYPE=DEL\tGT\t1\nX\t75212778\tDUP_gs.X_CNV_X_75212778_75222868\tC\t<CN0>,<CN2>\t.\tPASS\tAC=4,3;AF=0.0010596,0.0007947;AFR_AF=0,0;AMR_AF=0,0.0019;AN=3775;CS=DUP_gs;EAS_AF=0,0;END=75222868;EUR_AF=0,0.0026;NS=2504;SAS_AF=0.0056,0;SVTYPE=CNV\tGT\t2\nX\t75277077\tYL_CN_TSI_4409\tA\t<CN0>\t100\tPASS\tAC=7;AF=0.00211921;AFR_AF=0.002;AMR_AF=0.0019;AN=2542;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0;END=75366938;EUR_AF=0.0065;NS=2504;SAS_AF=0;SVTYPE=DEL\tGT\t.\nX\t75301385\tDUP_gs.X_CNV_X_75301385_75313459\tA\t<CN0>,<CN2>\t.\tPASS\tAC=1,11;AF=0.0002649,0.00291391;AFR_AF=0,0.011;AMR_AF=0,0;AN=3775;CS=DUP_gs;EAS_AF=0,0;END=75313459;EUR_AF=0.0013,0;NS=2504;SAS_AF=0,0;SVTYPE=CNV\tGT\t0\nX\t75316532\tDEL_pindel_53931\tTTGGCTTTTATGGTGTTGAAGTAATTTCCTTCTATTTTTAGTCTGTTGAATGTTTCTATCATAAAAACTGTTAAATTTTGTCAAATCCATATCAAAATCCCAAAGACATGTTTTGCACACACACACAAAAATCTTAAAATTTATATAAAACCACAAAAGAGTGAAGAGCCAAAAGACCCTTAAGAAAGAACAAACTTGGAAGCCTCACAATTCCTAATTTCAACACATATTACAAAACTACAGTAATCAAAACATTGCAGTACTGGCATAAAAATGGACACATGAATCAA\tT\t.\tPASS\tAC=456;AF=0.120795;AFR_AF=0.1186;AMR_AF=0.0725;AN=3775;CS=DEL_pindel;EAS_AF=0.1283;END=75316821;EUR_AF=0.141;NS=2504;SAS_AF=0.1295;SVTYPE=DEL\tGT\t1\nX\t75328210\tDUP_gs.X_CNV_X_75328210_75344469\tG\t<CN0>,<CN2>\t.\tPASS\tAC=1,2;AF=0.0002649,0.0005298;AFR_AF=0,0.001;AMR_AF=0,0.0019;AN=3775;CS=DUP_gs;EAS_AF=0,0;END=75344469;EUR_AF=0.0013,0;NS=2504;SAS_AF=0,0;SVTYPE=CNV\tGT\t0\nX\t75345754\tDUP_gs.X_CNV_X_75345754_75482545\tT\t<CN0>,<CN2>\t.\tPASS\tAC=0,1;AF=0,0.0002649;AFR_AF=0,0.001;AMR_AF=0,0;AN=3775;CS=DUP_gs;EAS_AF=0,0;END=75482545;EUR_AF=0,0;NS=2504;SAS_AF=0,0;SVTYPE=DUP\tGT\t0\nX\t75418334\tDEL_pindel_53933\tTAAATTTATTGTAGATTCTGGACATTAGTTTTCTGTCAGATGTATAGATTGCA\tT\t.\tPASS\tAC=767;AF=0.203179;AFR_AF=0.1934;AMR_AF=0.2004;AN=3775;CS=DEL_pindel;EAS_AF=0.2147;END=75418386;EUR_AF=0.1854;NS=2504;SAS_AF=0.2256;SVTYPE=DEL\tGT\t0\nX\t75493658\tDUP_gs.X_CNV_X_75493658_75515099\tG\t<CN0>,<CN2>\t.\tPASS\tAC=18,1;AF=0.00476821,0.0002649;AFR_AF=0,0.001;AMR_AF=0,0;AN=3775;CS=DUP_gs;EAS_AF=0,0;END=75515099;EUR_AF=0,0;NS=2504;SAS_AF=0.0251,0;SVTYPE=CNV\tGT\t0\nX\t75493696\tBI_GS_DEL1_B5_P2973_337\tC\t<CN0>\t100\tPASS\tAC=22;AF=0.00741722;AFR_AF=0.002;AMR_AF=0.0019;AN=2542;CIEND=-23,23;CIPOS=-23,23;CS=DEL_union;EAS_AF=0.0013;END=75514939;EUR_AF=0.0065;MC=YL_CN_STU_4610;NS=2504;SAS_AF=0.0265;SVTYPE=DEL\tGT\t.\nX\t75504175\tDEL_pindel_53934\tGGAGATTGCTGTAAGTAGTAAGGACATTTTAAAAATATTGAATCTTCCATTCCATAAACATGAAATGTATTTCTATTTTTTATGTTCCTTTCAATTTCTTTCATCAGTGTTTGATAGTTCTTATTATA\tG\t.\tPASS\tAC=600;AF=0.15894;AFR_AF=0.1715;AMR_AF=0.1775;AN=3775;CS=DEL_pindel;EAS_AF=0.1571;END=75504302;EUR_AF=0.1632;NS=2504;SAS_AF=0.1253;SVTYPE=DEL\tGT\t0\nX\t75777695\tDEL_pindel_53937\tATGTTTGCAGCTCGATCTTTCAGGCTGTTCTTTGTTGTTAGAAAAAAAAAATTTTCTGAGCTGCTTTTAGCTAGAAGGGAAGTTCTGCTGAATACTCATTTGCCCTCACTATC\tA\t.\tPASS\tAC=190;AF=0.0503311;AFR_AF=0.0309;AMR_AF=0.0725;AN=3775;CS=DEL_pindel;EAS_AF=0.0694;END=75777807;EUR_AF=0.0587;NS=2504;SAS_AF=0.032;SVTYPE=DEL\tGT\t0\nX\t75801323\tDUP_gs.X_CNV_X_75801323_75841719\tA\t<CN0>,<CN2>\t.\tPASS\tAC=4,1;AF=0.0010596,0.0002649;AFR_AF=0.003,0;AMR_AF=0.0019,0.0019;AN=3775;CS=DUP_gs;EAS_AF=0,0;END=75841719;EUR_AF=0,0;NS=2504;SAS_AF=0,0;SVTYPE=CNV\tGT\t0\nX\t75803073\tBI_GS_DEL1_B3_P2973_18\tT\t<CN0>\t100\tPASS\tAC=6;AF=0.00291391;AFR_AF=0.006;AMR_AF=0.0038;AN=2542;CIEND=-19,19;CIPOS=-19,19;CS=DEL_union;EAS_AF=0;END=75842039;EUR_AF=0.0039;MC=YL_CN_GWD_5877;NS=2504;SAS_AF=0;SVTYPE=DEL\tGT\t.\nX\t75821429\tBI_GS_DEL1_B5_P2973_553\tG\t<CN0>\t100\tPASS\tAC=7;AF=0.00609272;AFR_AF=0.011;AMR_AF=0.0057;AN=2542;CIEND=-8,8;CIPOS=-8,8;CS=DEL_union;EAS_AF=0.0013;END=75824703;EUR_AF=0.0065;MC=YL_CN_ASW_4571;NS=2504;SAS_AF=0.0042;SVTYPE=DEL\tGT\t.\nX\t76004940\tYL_CN_CHB_4682\tA\t<CN0>\t100\tPASS\tAC=10;AF=0.00291391;AFR_AF=0.003;AMR_AF=0.0019;AN=2542;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0.0026;END=76120864;EUR_AF=0.0065;NS=2504;SAS_AF=0;SVTYPE=DEL\tGT\t.\nX\t76030109\tDEL_pindel_53942\tCAAAAACTATAAGAAGAGACAAAGAAAGTCATGATGTAATAATAAAGGGGTCAATTCCACAAGAGGATATGACAATTTTAAATATATATGCACCCAATATTGGAGCACCCAAATATATGTAAGAAATATTATGACAGCTAAAGAAAGAGAGAGACTCCAATGCAATAATGGCTGGAG\tC\t.\tPASS\tAC=1464;AF=0.387815;AFR_AF=0.4247;AMR_AF=0.3492;AN=3775;CS=DEL_pindel;EAS_AF=0.3338;END=76030285;EUR_AF=0.406;NS=2504;SAS_AF=0.4025;SVTYPE=DEL\tGT\t1\nX\t76090768\tYL_CN_STU_4611\tA\t<CN0>\t100\tPASS\tAC=9;AF=0.00503311;AFR_AF=0.004;AMR_AF=0.0038;AN=2542;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0.0052;END=76094679;EUR_AF=0.0052;NS=2504;SAS_AF=0.007;SVTYPE=DEL\tGT\t.\nX\t76123370\tYL_CN_CHS_4744\tA\t<CN0>\t100\tPASS\tAC=11;AF=0.00370861;AFR_AF=0.003;AMR_AF=0.0019;AN=2542;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0.0026;END=76145606;EUR_AF=0.0104;MC=EM_DL_DEL105369,BI_GS_DEL1_B2_P2974_61,YL_CN_FIN_4313;NS=2504;SAS_AF=0;SVTYPE=DEL\tGT\t.\nX\t76170971\tDEL_pindel_53943\tCAGCCCATGGAGCAGCACGGGGAATTGCCTCACCAAGAAGTGCAAGGGGTCAGGGAATTCCCTTTCCTAGCCAAGGGTAGCCGTGACAGATGGTACCTGGAAAATCGGGAAACTCCCACCTTAATACTGTGCTTTTCCAATAGTCTTAGCAAATGGCACACCAGGAGATTATATCCTGAGCATGGTTCAGAGTGACCCACACCCATGGAGTCTCACTCACTGCTAGCACAGCAGTCTGAGATCGAACTGCAAGGTGCAGCAAGGCTGGTGGAGGGGAGTCCACCATTGCTGAGGCTTAAGTAGGTAAACAAAGAGGCCAGGAAGCTTGAACTGGGTGG\tC\t.\tPASS\tAC=243;AF=0.0643709;AFR_AF=0.0648;AMR_AF=0.0573;AN=3775;CS=DEL_pindel;EAS_AF=0.0471;END=76171308;EUR_AF=0.0875;NS=2504;SAS_AF=0.0627;SVTYPE=DEL\tGT\t1\nX\t76195189\tL1_umary_LINE1_3074\tA\t<INS:ME:LINE1>\t.\tPASS\tAC=1;AF=0.0002649;AFR_AF=0;AMR_AF=0;AN=3775;CS=L1_umary;EAS_AF=0;EUR_AF=0.0013;MEINFO=LINE1,1417,5627,+;NS=2504;SAS_AF=0;SVLEN=4210;SVTYPE=LINE1;TSD=AAAA\tGT\t0\nX\t76539575\tDEL_pindel_53944\tTCCTAGTCAAAGAAAGGCGTGACAGACAGCACCTGGAAAATTGGGTCACTCCTACCTTAATACTGCACTTTTCCAATGG\tT\t.\tPASS\tAC=4;AF=0.0010596;AFR_AF=0.002;AMR_AF=0.0038;AN=3775;CS=DEL_pindel;EAS_AF=0;END=76539653;EUR_AF=0;NS=2504;SAS_AF=0;SVTYPE=DEL\tGT\t0\nX\t76574661\tALU_umary_ALU_12683\tC\t<INS:ME:ALU>\t.\tPASS\tAC=1781;AF=0.471788;AFR_AF=0.325;AMR_AF=0.5153;AN=3775;CS=ALU_umary;EAS_AF=0.2238;EUR_AF=0.765;MEINFO=AluUndef,2,281,+;NS=2504;SAS_AF=0.5961;SVLEN=279;SVTYPE=ALU;TSD=AAAAAAACAAACACTGC\tGT\t1\nX\t76764888\tBI_GS_DEL1_B4_P2974_100\tC\t<CN0>\t100\tPASS\tAC=4;AF=0.0015894;AFR_AF=0.002;AMR_AF=0.0019;AN=2542;CIEND=-57,57;CIPOS=-57,57;CS=DEL_union;EAS_AF=0;END=76769437;EUR_AF=0.0026;MC=YL_CN_STU_4612;NS=2504;SAS_AF=0.0014;SVTYPE=DEL\tGT\t.\nX\t76845417\tYL_CN_TSI_4410\tA\t<CN0>\t100\tPASS\tAC=11;AF=0.0140397;AFR_AF=0.016;AMR_AF=0.0057;AN=2542;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0.0118;END=76849135;EUR_AF=0.0235;NS=2504;SAS_AF=0.0097;SVTYPE=DEL\tGT\t.\nX\t76863558\tBI_GS_DEL1_B1_P2974_425\tA\t<CN0>\t100\tPASS\tAC=5;AF=0.00317881;AFR_AF=0.003;AMR_AF=0.0019;AN=2542;CIEND=-25,25;CIPOS=-25,25;CS=DEL_union;EAS_AF=0.0026;END=76867044;EUR_AF=0.0052;MC=YL_CN_GBR_4534;NS=2504;SAS_AF=0.0028;SVTYPE=DEL\tGT\t.\nX\t76881496\tDEL_pindel_53951\tCATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATAT\tC\t.\tPASS\tAC=1059;AF=0.28053;AFR_AF=0.2612;AMR_AF=0.3225;AN=3775;CS=DEL_pindel;EAS_AF=0.25;END=76881558;EUR_AF=0.2715;NS=2504;SAS_AF=0.3189;SVTYPE=DEL\tGT\t0\nX\t77013644\tUW_VH_25191\tT\t<CN0>\t100\tPASS\tAC=10;AF=0.00291391;AFR_AF=0.004;AMR_AF=0.0019;AN=2542;CIEND=0,255;CIPOS=-78,0;CS=DEL_union;EAS_AF=0.0013;END=77029895;EUR_AF=0.0039;MC=YL_CN_ITU_4707;NS=2504;SAS_AF=0.0028;SVTYPE=DEL\tGT\t.\nX\t77055184\tDUP_gs.X_CNV_X_77055184_77085679\tG\t<CN0>,<CN2>\t.\tPASS\tAC=0,1;AF=0,0.0002649;AFR_AF=0,0;AMR_AF=0,0.0019;AN=3775;CS=DUP_gs;EAS_AF=0,0;END=77085679;EUR_AF=0,0;NS=2504;SAS_AF=0,0;SVTYPE=DUP\tGT\t0\nX\t77121360\tUW_VH_1301\tA\t<CN0>\t100\tPASS\tAC=1135;AF=0.443974;AFR_AF=0.0508;AMR_AF=0.6145;AN=2542;CIEND=0,432;CIPOS=-546,0;CS=DEL_union;EAS_AF=0.5183;END=77123888;EUR_AF=0.6919;MC=EM_DL_DEL105387,BI_GS_DEL1_B1_P2975_52,YL_CN_ITU_4708;NS=2504;SAS_AF=0.5251;SVTYPE=DEL\tGT\t.\nX\t77515999\tBI_GS_DEL1_B1_P2975_253\tG\t<CN0>\t100\tPASS\tAC=94;AF=0.0415894;AFR_AF=0.1147;AMR_AF=0.021;AN=2542;CIEND=-5,6;CIPOS=-5,6;CS=DEL_union;EAS_AF=0.0013;END=77524077;EUR_AF=0.017;MC=YL_CN_TSI_4412,UW_VH_2806;NS=2504;SAS_AF=0.0237;SVTYPE=DEL\tGT\t.\nX\t77696852\tDEL_pindel_53962\tATTCTTTTTTTTTACATGTGCACATTGTGCAGGTTAGTTACATATGTATACATGTGCCATGCTGGTGCGCTGCACCCACTAATGTGTCATCTAGCATTAGGTATATCTCCCAATGCTATCCCTCCCCCCTCCCCCGACCCCACCACAGTCCCCAGAGTGTGATATTCCCCTTCCTGTGTCCATGTGATCTCATTGTTCAATTCCCACCTATGAGTGAGAATATGCGGTGTTTGGTTTTTTGTTCTTGCGATAGTTTACTGAGAATGATGGTTTCCAATTTCATCCATGTCCCTACAAAGGATATGAACTCATCATTTTTTATGGCTGCATAGTATTCCATGGTGTATATGTGCCACATTTTCTTAATCCAGTCTATCATTGTTGGACATTTGGGTTGGTTCCAAGTCTTTGCTATTGTGAATAGTGCCGCAATAAACATACGTGTGCATGTGTCTTTATAGCAGCATGATTTATACTCATTTGGGTATATACCCAGTAATGGGATGGCTGGGTCAAATGGTATTTCTAGTTCTAGATCCCTGAGGAATCGCCACACTGACTTCCACAATGGTTGAACTAGTTTACAGTCCCACCAACAG\tA\t.\tPASS\tAC=2348;AF=0.621987;AFR_AF=0.6869;AMR_AF=0.6622;AN=3775;CS=DEL_pindel;EAS_AF=0.5668;END=77697450;EUR_AF=0.6188;MEINFO=LINE1,5415,6009,-;NS=2504;SAS_AF=0.5641;SVTYPE=DEL_LINE1\tGT\t1\nX\t77757016\tDEL_pindel_53963\tTGCCTTGAAGGAATGAACCTAGTCCTGGAAGAATTCATCACCTGCTAGCTGAAGAGCCTTTGGCCCCTGAATAGCCAGTAGCAATATCCA\tT\t.\tPASS\tAC=928;AF=0.245828;AFR_AF=0.2273;AMR_AF=0.2557;AN=3775;CS=DEL_pindel;EAS_AF=0.2343;END=77757105;EUR_AF=0.248;NS=2504;SAS_AF=0.2744;SVTYPE=DEL\tGT\t1\nX\t77906416\tUW_VH_11792\tC\t<CN0>\t100\tPASS\tAC=8;AF=0.00238411;AFR_AF=0.002;AMR_AF=0.0019;AN=2542;CIEND=0,195;CIPOS=-206,0;CS=DEL_union;EAS_AF=0.0026;END=77910911;EUR_AF=0.0052;NS=2504;SAS_AF=0;SVTYPE=DEL\tGT\t.\nX\t77912083\tDEL_pindel_53968\tAGTGCGGGTACTCCATTCTATGTTTGGGTCATGTGTCTCAAGCCAATGGATTCCAATAATCAGAGGGTATCGTG\tA\t.\tPASS\tAC=605;AF=0.160265;AFR_AF=0.1256;AMR_AF=0.1908;AN=3775;CS=DEL_pindel;EAS_AF=0.1675;END=77912156;EUR_AF=0.1593;NS=2504;SAS_AF=0.1797;SVTYPE=DEL\tGT\t1\nX\t77922691\tDEL_pindel_53969\tTCAGGTGATCTTCTCTTTTAATGTTTCCTAGAGCTTTTGAATGTATGTTTTCTTAACACTGTAATCCTGGCTGTGATTTCCCTCATGTTCAGAATGATTAAATTTTCCTTCACCTTTGAGTCAGGTATTAAACAGGCATAGATGTCCCATGCTAACCCCAGCATGGACCTCTTGGTTTAGCTCTTTTATCTCAATCTCTTCCTGTAGAATATTTACATAACCAAATTCCATTTCCC\tT\t.\tPASS\tAC=214;AF=0.0566887;AFR_AF=0.0279;AMR_AF=0.042;AN=3775;CS=DEL_pindel;EAS_AF=0.0877;END=77922926;EUR_AF=0.0757;NS=2504;SAS_AF=0.0543;SVTYPE=DEL\tGT\t0\nX\t77959041\tDEL_pindel_53971\tGTCAACATAGCTGAGATATATATATATATATATATATATATATATATATATATATATA\tG\t.\tPASS\tAC=1289;AF=0.341457;AFR_AF=0.4566;AMR_AF=0.334;AN=3775;CS=DEL_pindel;EAS_AF=0.2814;END=77959098;EUR_AF=0.295;NS=2504;SAS_AF=0.2994;SVTYPE=DEL\tGT\t0\nX\t78024911\tBI_GS_DEL1_B3_P2976_3\tT\t<CN0>\t100\tPASS\tAC=291;AF=0.288742;AFR_AF=0.2712;AMR_AF=0.2634;AN=2542;CIEND=-2,2;CIPOS=-2,2;CS=DEL_union;EAS_AF=0.288;END=78025278;EUR_AF=0.2794;NS=2504;SAS_AF=0.3426;SVTYPE=DEL\tGT\t.\nX\t78047643\tALU_umary_ALU_12685\tT\t<INS:ME:ALU>\t.\tPASS\tAC=28;AF=0.00741722;AFR_AF=0.0239;AMR_AF=0.0076;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0;MEINFO=AluUndef,1,278,-;NS=2504;SAS_AF=0;SVLEN=277;SVTYPE=ALU;TSD=GCACCAAAGCTTTTT\tGT\t0\nX\t78151926\tBI_GS_DEL1_B5_P2976_132\tA\t<CN0>\t100\tPASS\tAC=6;AF=0.0196027;AFR_AF=0.013;AMR_AF=0.0248;AN=2542;CIEND=-40,40;CIPOS=-40,40;CS=DEL_union;EAS_AF=0.0118;END=78153773;EUR_AF=0.0235;NS=2504;SAS_AF=0.0292;SVTYPE=DEL\tGT\t.\nX\t78192990\tBI_GS_DEL1_B2_P2976_101\tG\t<CN0>\t100\tPASS\tAC=390;AF=0.344901;AFR_AF=0.324;AMR_AF=0.3397;AN=2542;CIEND=-18,19;CIPOS=-18,19;CS=DEL_union;EAS_AF=0.322;END=78193423;EUR_AF=0.3499;NS=2504;SAS_AF=0.3969;SVTYPE=DEL\tGT\t.\nX\t78259192\tALU_umary_ALU_12686\tT\t<INS:ME:ALU>\t.\tPASS\tAC=1;AF=0.0002649;AFR_AF=0;AMR_AF=0;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0.0013;MEINFO=AluUndef,31,280,-;NS=2504;SAS_AF=0;SVLEN=249;SVTYPE=ALU;TSD=null\tGT\t0\nX\t78415647\tALU_umary_ALU_12687\tT\t<INS:ME:ALU>\t.\tPASS\tAC=76;AF=0.0201325;AFR_AF=0;AMR_AF=0.0019;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0.0026;MEINFO=AluYc2,1,281,-;NS=2504;SAS_AF=0.1017;SVLEN=280;SVTYPE=ALU;TSD=CAAGAAAAATGAGTCTTT\tGT\t0\nX\t78467635\tDEL_pindel_53974\tGAGGACCCAAGCCCTACCCATACCAAGCCTTTCCCTTAGAGCTCTTGCAGCCACCTATGAAATTAAAAAGGAAGTAAGCCAGTGTCA\tG\t.\tPASS\tAC=314;AF=0.0831788;AFR_AF=0.0518;AMR_AF=0.124;AN=3775;CS=DEL_pindel;EAS_AF=0.0707;END=78467721;EUR_AF=0.0927;NS=2504;SAS_AF=0.1003;SVTYPE=DEL\tGT\t0\nX\t78534143\tALU_umary_ALU_12688\tT\t<INS:ME:ALU>\t.\tPASS\tAC=50;AF=0.013245;AFR_AF=0.0449;AMR_AF=0.0095;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0;MEINFO=AluYa5,6,281,+;NS=2504;SAS_AF=0;SVLEN=275;SVTYPE=ALU;TSD=null\tGT\t0\nX\t78590426\tDEL_pindel_53975\tGCTTCTACTGATCCTGTTACACAGCTAGTAAGCATAAATAGCATATTTTTCAGCCCTTGCTCCCCTCCTTCT\tG\t.\tPASS\tAC=1383;AF=0.366358;AFR_AF=0.3918;AMR_AF=0.3321;AN=3775;CS=DEL_pindel;EAS_AF=0.3168;END=78590497;EUR_AF=0.3316;NS=2504;SAS_AF=0.4457;SVTYPE=DEL\tGT\t1\nX\t78724855\tDEL_pindel_53979\tGACATTACCCCACTTTAAAGTATACAACAAGGCTATAGTTACCAAAACAACATGGT\tG\t.\tPASS\tAC=1433;AF=0.379603;AFR_AF=0.3729;AMR_AF=0.3378;AN=3775;CS=DEL_pindel;EAS_AF=0.3586;END=78724910;EUR_AF=0.3473;NS=2504;SAS_AF=0.4763;SVTYPE=DEL\tGT\t0\nX\t78738314\tBI_GS_DEL1_B2_P2976_380\tT\t<CN0>\t100\tPASS\tAC=159;AF=0.193907;AFR_AF=0.2094;AMR_AF=0.1794;AN=2542;CIEND=-3,3;CIPOS=-3,3;CS=DEL_union;EAS_AF=0.1728;END=78738921;EUR_AF=0.1775;NS=2504;SAS_AF=0.2228;SVTYPE=DEL\tGT\t.\nX\t78863969\tDUP_gs.X_CNV_X_78863969_78921419\tA\t<CN0>,<CN2>\t.\tPASS\tAC=0,1;AF=0,0.0002649;AFR_AF=0,0;AMR_AF=0,0;AN=3775;CS=DUP_gs;EAS_AF=0,0.0013;END=78921419;EUR_AF=0,0;NS=2504;SAS_AF=0,0;SVTYPE=DUP\tGT\t0\nX\t78921957\tBI_GS_DEL1_B1_P2976_547\tC\t<CN0>\t100\tPASS\tAC=1038;AF=0.409801;AFR_AF=0.1196;AMR_AF=0.3244;AN=2542;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.5183;END=78926007;EUR_AF=0.5496;MC=YL_CN_MSL_4057,EM_DL_DEL105599;NS=2504;SAS_AF=0.6128;SVTYPE=DEL\tGT\t.\nX\t78927122\tDUP_gs.X_CNV_X_78927122_78946894\tT\t<CN0>,<CN2>\t.\tPASS\tAC=0,1;AF=0,0.0002649;AFR_AF=0,0;AMR_AF=0,0;AN=3775;CS=DUP_gs;EAS_AF=0,0.0013;END=78946894;EUR_AF=0,0;NS=2504;SAS_AF=0,0;SVTYPE=DUP\tGT\t0\nX\t78946447\tUW_VH_1658\tT\t<CN0>\t100\tPASS\tAC=471;AF=0.18596;AFR_AF=0.0947;AMR_AF=0.3989;AN=2542;CIEND=0,405;CIPOS=-434,0;CS=DEL_union;EAS_AF=0.2251;END=78948827;EUR_AF=0.2037;MC=YL_CN_MXL_3759,YL_CN_PEL_4356,EM_DL_DEL105850,BI_GS_DEL1_B5_P2976_743,YL_CN_ASW_4575,YL_CN_GIH_3455;NS=2504;SAS_AF=0.0975;SVTYPE=DEL\tGT\t.\nX\t78979090\tUW_VH_21526\tT\t<CN0>\t100\tPASS\tAC=8;AF=0.00211921;AFR_AF=0.002;AMR_AF=0.0019;AN=2542;CIEND=0,185;CIPOS=-123,0;CS=DEL_union;EAS_AF=0.0013;END=78989060;EUR_AF=0.0052;NS=2504;SAS_AF=0;SVTYPE=DEL\tGT\t.\nX\t78997248\tDUP_gs.X_CNV_X_78997248_79021023\tA\t<CN0>,<CN2>\t.\tPASS\tAC=1,4;AF=0.0002649,0.0010596;AFR_AF=0.001,0;AMR_AF=0,0;AN=3775;CS=DUP_gs;EAS_AF=0,0;END=79021023;EUR_AF=0,0.0052;NS=2504;SAS_AF=0,0;SVTYPE=CNV\tGT\t0\nX\t79004398\tBI_GS_DEL1_B5_P2977_6\tT\t<CN0>\t100\tPASS\tAC=8;AF=0.00238411;AFR_AF=0.007;AMR_AF=0;AN=2542;CIEND=-18,19;CIPOS=-18,19;CS=DEL_union;EAS_AF=0;END=79008984;EUR_AF=0.0026;MC=YL_CN_YRI_5599;NS=2504;SAS_AF=0;SVTYPE=DEL\tGT\t.\nX\t79100775\tEM_DL_DEL105857\tA\t<CN0>\t100\tPASS\tAC=13;AF=0.00397351;AFR_AF=0.002;AMR_AF=0.0019;AN=2542;CIEND=-150,150;CIPOS=-150,150;CS=DEL_union;EAS_AF=0;END=79104606;EUR_AF=0.0157;MC=YL_CN_CEU_5443;NS=2504;SAS_AF=0;SVTYPE=DEL\tGT\t.\nX\t79120207\tDEL_pindel_53986\tGCTGTCTTGTACTAAATGTACCTCCGTAGCCACCCAGGCAGGAAAGGTTCACCATCCCCTCTCAATTGCTTCTTTTTT\tG\t.\tPASS\tAC=1437;AF=0.380662;AFR_AF=0.5254;AMR_AF=0.3359;AN=3775;CS=DEL_pindel;EAS_AF=0.3102;END=79120284;EUR_AF=0.3107;NS=2504;SAS_AF=0.3607;SVTYPE=DEL\tGT\t1\nX\t79207268\tDEL_pindel_53989\tAGACATAGAACAATAAGACATAAAGAGAAACAACAAAATGTTAAAGAAGAGGGCACGAAGATAAAGTGTAGCTTCTATTT\tA\t.\tPASS\tAC=961;AF=0.25457;AFR_AF=0.2473;AMR_AF=0.2385;AN=3775;CS=DEL_pindel;EAS_AF=0.2565;END=79207347;EUR_AF=0.2493;NS=2504;SAS_AF=0.2799;SVTYPE=DEL\tGT\t1\nX\t79222117\tDEL_pindel_53990\tCCAACTTCACTTCTTCTGAGTCTCTTACATTTATTATACCACTCTGCAAGCCTTTTTGTACCCAGAGAGCTTACTTACCTCCTACTTGTGAGAACATGTAACATTTGGTTTCACCTTTTTAGTTACTTCACTTAGAATAATGGTTTAAAGCTACTTCCAATTTGCTATAAAAGA\tC\t.\tPASS\tAC=1683;AF=0.445828;AFR_AF=0.3888;AMR_AF=0.4714;AN=3775;CS=DEL_pindel;EAS_AF=0.4712;END=79222290;EUR_AF=0.4399;NS=2504;SAS_AF=0.4861;SVTYPE=DEL\tGT\t1\nX\t79238236\tDEL_pindel_53991\tTGAACAATTACAACAACTTGGTCTCCATTGAGTTATGGTGAGTGAAAAAAAAAGCCAATCCTCAAA\tT\t.\tPASS\tAC=1754;AF=0.464636;AFR_AF=0.3988;AMR_AF=0.4752;AN=3775;CS=DEL_pindel;EAS_AF=0.4961;END=79238301;EUR_AF=0.4804;NS=2504;SAS_AF=0.4986;SVTYPE=DEL\tGT\t1\nX\t79263134\tDUP_gs.X_CNV_X_79263134_79303934\tA\t<CN0>,<CN2>\t.\tPASS\tAC=0,1;AF=0,0.0002649;AFR_AF=0,0;AMR_AF=0,0.0019;AN=3775;CS=DUP_gs;EAS_AF=0,0;END=79303934;EUR_AF=0,0;NS=2504;SAS_AF=0,0;SVTYPE=DUP\tGT\t0\nX\t79315102\tBI_GS_DEL1_B3_P2977_16\tT\t<CN0>\t100\tPASS\tAC=25;AF=0.0678146;AFR_AF=0.0798;AMR_AF=0.0687;AN=2542;CIEND=-14,14;CIPOS=-14,14;CS=DEL_union;EAS_AF=0.0458;END=79316246;EUR_AF=0.0653;NS=2504;SAS_AF=0.0766;SVTYPE=DEL\tGT\t.\nX\t79316070\tBI_GS_DEL1_B4_P2977_37\tA\t<CN0>\t100\tPASS\tAC=8;AF=0.00211921;AFR_AF=0.003;AMR_AF=0;AN=2542;CIEND=-14,14;CIPOS=-14,14;CS=DEL_union;EAS_AF=0.0013;END=79324583;EUR_AF=0.0052;MC=UW_VH_19870;NS=2504;SAS_AF=0;SVTYPE=DEL\tGT\t.\nX\t79318102\tDUP_gs.X_CNV_X_79318102_79325578\tA\t<CN0>,<CN2>\t.\tPASS\tAC=1,1;AF=0.0002649,0.0002649;AFR_AF=0,0;AMR_AF=0,0.0019;AN=3775;CS=DUP_gs;EAS_AF=0,0;END=79325578;EUR_AF=0.0013,0;NS=2504;SAS_AF=0,0;SVTYPE=CNV\tGT\t0\nX\t79332230\tUW_VH_5955\tT\t<CN0>\t100\tPASS\tAC=8;AF=0.00264901;AFR_AF=0.003;AMR_AF=0.0019;AN=2542;CIEND=0,164;CIPOS=-218,0;CS=DEL_union;EAS_AF=0.0026;END=79336825;EUR_AF=0.0052;MC=BI_GS_DEL1_B1_P2977_193,YL_CN_CHS_4748;NS=2504;SAS_AF=0;SVTYPE=DEL\tGT\t.\nX\t79365292\tUW_VH_6363\tA\t<CN0>\t100\tPASS\tAC=5;AF=0.0137748;AFR_AF=0.01;AMR_AF=0.0115;AN=2542;CIEND=0,199;CIPOS=-187,0;CS=DEL_union;EAS_AF=0.0157;END=79367452;EUR_AF=0.0261;NS=2504;SAS_AF=0.0056;SVTYPE=DEL\tGT\t.\nX\t79484828\tL1_umary_LINE1_3075\tC\t<INS:ME:LINE1>\t.\tPASS\tAC=1;AF=0.0002649;AFR_AF=0;AMR_AF=0;AN=3775;CS=L1_umary;EAS_AF=0.0013;EUR_AF=0;MEINFO=LINE1,9,6019,-;NS=2504;SAS_AF=0;SVLEN=6010;SVTYPE=LINE1;TSD=null\tGT\t0\nX\t79550979\tBI_GS_DEL1_B4_P2977_61\tA\t<CN0>\t100\tPASS\tAC=6;AF=0.0015894;AFR_AF=0.002;AMR_AF=0;AN=2542;CIEND=-31,32;CIPOS=-31,32;CS=DEL_union;EAS_AF=0;END=79561187;EUR_AF=0.0039;MC=YL_CN_STU_4617;NS=2504;SAS_AF=0.0014;SVTYPE=DEL\tGT\t.\nX\t79571266\tALU_umary_ALU_12689\tT\t<INS:ME:ALU>\t.\tPASS\tAC=38;AF=0.0100662;AFR_AF=0.0359;AMR_AF=0.0038;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0;MEINFO=AluYa4_5,1,281,-;NS=2504;SAS_AF=0;SVLEN=280;SVTYPE=ALU;TSD=CTTATTTTGTTTT\tGT\t0\nX\t79735785\tYL_CN_GWD_5883\tA\t<CN0>\t100\tPASS\tAC=6;AF=0.0018543;AFR_AF=0.003;AMR_AF=0.0019;AN=2542;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0;END=79769230;EUR_AF=0.0039;NS=2504;SAS_AF=0;SVTYPE=DEL\tGT\t.\nX\t79762384\tBI_GS_DEL1_B4_P2977_86\tT\t<CN0>\t100\tPASS\tAC=5;AF=0.00715232;AFR_AF=0.01;AMR_AF=0.0095;AN=2542;CIEND=-32,33;CIPOS=-32,33;CS=DEL_union;EAS_AF=0.0052;END=79765443;EUR_AF=0.0065;NS=2504;SAS_AF=0.0042;SVTYPE=DEL\tGT\t.\nX\t79846845\tDEL_pindel_53998\tTGGGGGCGTCAGCCCCCCGCCCGGCCAGCCACCCTGTCCGGGAGGTGAGGGGCGCCTCTGCCCGGCCGCCCCTACTGGGAAGTGAGGAGCCCCTCTGCCCGGCCAGCCGCCCCGTCTGGGAGGGAGGTG\tT\t.\tPASS\tAC=983;AF=0.260397;AFR_AF=0.2652;AMR_AF=0.2385;AN=3775;CS=DEL_pindel;EAS_AF=0.212;END=79846973;EUR_AF=0.3068;NS=2504;SAS_AF=0.2716;SVTYPE=DEL\tGT\t0\nX\t79926527\tDUP_gs.X_CNV_X_79926527_79971253\tT\t<CN0>,<CN2>\t.\tPASS\tAC=0,1;AF=0,0.0002649;AFR_AF=0,0.001;AMR_AF=0,0;AN=3775;CS=DUP_gs;EAS_AF=0,0;END=79971253;EUR_AF=0,0;NS=2504;SAS_AF=0,0;SVTYPE=DUP\tGT\t0\nX\t79969280\tSVA_umary_SVA_839\tT\t<INS:ME:SVA>\t.\tPASS\tAC=14;AF=0.00370861;AFR_AF=0.014;AMR_AF=0;AN=3775;CS=SVA_umary;EAS_AF=0;EUR_AF=0;MEINFO=SVA,87,1627,-;NS=2504;SAS_AF=0;SVLEN=1540;SVTYPE=SVA;TSD=null\tGT\t0\nX\t79981486\tDEL_pindel_54000\tATATAACATAACATGTTTACATGTTATATGTCTATATAACATATAACATGTTTACATGTTATGTCTATATAACACAACATGTTTACATGTTGTCTGTATAACAACATGTTTACATGTTATGTGTCTGTATAACATATAACACGTTTACATATGTCTGTATAACATATAACACGTTTACATGTTATATGTCTGTATAACATATAACACGTTTACATGTTATATGTCTGTATAACATATAACACGTTTACATGTTATATGTCTGTATAACATATAACACGTTTACATGTTATGTCTGTATAACATATAACACGTTTACATGTTATGTCTGTATAACATATAACATGTTTACATGTTATGTCTGTATAACATATAACATGTTTACATGTTATATCTG\tA\t.\tPASS\tAC=1795;AF=0.475497;AFR_AF=0.5125;AMR_AF=0.4198;AN=3775;CS=DEL_pindel;EAS_AF=0.4699;END=79981879;EUR_AF=0.4008;NS=2504;SAS_AF=0.5501;SVTYPE=DEL\tGT\t1\nX\t80023586\tUW_VH_21210\tA\t<CN0>\t100\tPASS\tAC=6;AF=0.00264901;AFR_AF=0.003;AMR_AF=0;AN=2542;CIEND=0,329;CIPOS=-320,0;CS=DEL_union;EAS_AF=0.0026;END=80027813;EUR_AF=0.0052;MC=YL_CN_CHB_4687;NS=2504;SAS_AF=0.0014;SVTYPE=DEL\tGT\t.\nX\t80088241\tBI_GS_DEL1_B2_P2978_36\tG\t<CN0>\t100\tPASS\tAC=9;AF=0.00264901;AFR_AF=0.002;AMR_AF=0.0019;AN=2542;CIEND=-4,5;CIPOS=-4,5;CS=DEL_union;EAS_AF=0.0039;END=80174976;EUR_AF=0.0052;MC=YL_CN_KHV_5045,EM_DL_DEL105869;NS=2504;SAS_AF=0;SVTYPE=DEL\tGT\t.\nX\t80132397\tSVA_umary_SVA_840\tA\t<INS:ME:SVA>\t.\tPASS\tAC=10;AF=0.00264901;AFR_AF=0;AMR_AF=0;AN=3775;CS=SVA_umary;EAS_AF=0.0131;EUR_AF=0;MEINFO=SVA,1189,1626,+;NS=2504;SAS_AF=0;SVLEN=437;SVTYPE=SVA;TSD=null\tGT\t0\nX\t80139055\tDEL_pindel_54003\tGAAGGAGAAATCGTGTACATGACCTTAGCTATTACCATATCCTGCACCACCGTGGCTAAACAGGAGGTACTGAGTCTGTCCATGTAACTTGTTAATTACTACTATAAGTGGTATTTGAGAAAGCCAACACACT\tG\t.\tPASS\tAC=1115;AF=0.295364;AFR_AF=0.2851;AMR_AF=0.2767;AN=3775;CS=DEL_pindel;EAS_AF=0.2853;END=80139187;EUR_AF=0.2872;NS=2504;SAS_AF=0.3426;SVTYPE=DEL\tGT\t1\nX\t80213833\tDUP_gs.X_CNV_X_80213833_80232204\tA\t<CN0>,<CN2>\t.\tPASS\tAC=0,16;AF=0,0.00423841;AFR_AF=0,0.016;AMR_AF=0,0;AN=3775;CS=DUP_gs;EAS_AF=0,0;END=80232204;EUR_AF=0,0;NS=2504;SAS_AF=0,0;SVTYPE=DUP\tGT\t0\nX\t80215707\tUW_VH_10563\tG\t<CN0>\t100\tPASS\tAC=46;AF=0.0402649;AFR_AF=0.0837;AMR_AF=0.0305;AN=2542;CIEND=0,202;CIPOS=-207,0;CS=DEL_union;EAS_AF=0.0209;END=80219480;EUR_AF=0.0209;MC=YL_CN_ASW_4578;NS=2504;SAS_AF=0.0279;SVTYPE=DEL\tGT\t.\nX\t80218748\tDUP_gs.X_CNV_X_80218748_80239502\tG\t<CN0>,<CN2>\t.\tPASS\tAC=0,16;AF=0,0.00423841;AFR_AF=0,0.016;AMR_AF=0,0;AN=3775;CS=DUP_gs;EAS_AF=0,0;END=80239502;EUR_AF=0,0;NS=2504;SAS_AF=0,0;SVTYPE=DUP\tGT\t0\nX\t80242587\tDEL_pindel_54005\tTTCTTGATTCTGATGCAAGTGGTCAGCACACCACACTTTGACAAACATTGTAACTTACAATTAAGGCTTACAAA\tT\t.\tPASS\tAC=78;AF=0.0206622;AFR_AF=0.0229;AMR_AF=0.0153;AN=3775;CS=DEL_pindel;EAS_AF=0.0236;END=80242660;EUR_AF=0.0196;NS=2504;SAS_AF=0.0195;SVTYPE=DEL\tGT\t0\nX\t80254248\tBI_GS_DEL1_B5_P2978_146\tA\t<CN0>\t100\tPASS\tAC=6;AF=0.0018543;AFR_AF=0.002;AMR_AF=0;AN=2542;CIEND=-20,21;CIPOS=-20,21;CS=DEL_union;EAS_AF=0;END=80260817;EUR_AF=0.0065;NS=2504;SAS_AF=0;SVTYPE=DEL\tGT\t.\nX\t80287951\tYL_CN_PEL_4357\tA\t<CN0>\t100\tPASS\tAC=7;AF=0.00211921;AFR_AF=0.002;AMR_AF=0.0038;AN=2542;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0;END=80295028;EUR_AF=0.0052;NS=2504;SAS_AF=0;SVTYPE=DEL\tGT\t.\nX\t80292897\tDEL_pindel_54006\tACATATTCAAATTAATAAACGTAATTTATCACATAAACAGAACCAATGACAAAAAAACTATGAATATCTCATTAGATGCAGAAAAGGCCTCTGATAAAATTCAACATCCCTTCATGTTAAAAACTCTCAATGAACTAGGTATTGATGGAACATATCTCAAAATAATAAGAGCTGTTTATGATAAACCCACAGCCAATATCATACTGAATGGGAAAAAGCTGGAAGCATTCTTTTTTAAAGCTTGCAAAAAACAAAAATGCCCTTTCTCACCACTCATATTAAACAGAGTATTGGAAGTTCTGCCCAGGGCAAT\tA\t.\tPASS\tAC=970;AF=0.256954;AFR_AF=0.2413;AMR_AF=0.2481;AN=3775;CS=DEL_pindel;EAS_AF=0.2723;END=80293209;EUR_AF=0.2454;NS=2504;SAS_AF=0.2813;SVTYPE=DEL\tGT\t1\nX\t80315861\tL1_umary_LINE1_3076\tC\t<INS:ME:LINE1>\t.\tPASS\tAC=24;AF=0.00635762;AFR_AF=0.0239;AMR_AF=0;AN=3775;CS=L1_umary;EAS_AF=0;EUR_AF=0;MEINFO=LINE1,1177,6000,-;NS=2504;SAS_AF=0;SVLEN=4823;SVTYPE=LINE1;TSD=GAGAAGTGCCTTTC\tGT\t0\nX\t80407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LU>\t.\tPASS\tAC=30;AF=0.00794702;AFR_AF=0.012;AMR_AF=0.0038;AN=3775;CS=ALU_umary;EAS_AF=0.0039;EUR_AF=0;MEINFO=AluYb8,3,278,-;NS=2504;SAS_AF=0.0181;SVLEN=275;SVTYPE=ALU;TSD=AAGTCATTCTT\tGT\t0\nX\t81584026\tBI_GS_DEL1_B1_P2979_301\tC\t<CN0>\t100\tPASS\tAC=11;AF=0.00476821;AFR_AF=0.004;AMR_AF=0.0076;AN=2542;CIEND=-10,11;CIPOS=-10,11;CS=DEL_union;EAS_AF=0.0026;END=81587382;EUR_AF=0.0091;MC=YL_CN_PUR_5697;NS=2504;SAS_AF=0.0014;SVTYPE=DEL\tGT\t.\nX\t81596386\tBI_GS_DEL1_B3_P2979_28\tT\t<CN0>\t100\tPASS\tAC=9;AF=0.00264901;AFR_AF=0.003;AMR_AF=0.0019;AN=2542;CIEND=-17,18;CIPOS=-17,18;CS=DEL_union;EAS_AF=0;END=81625572;EUR_AF=0.0065;MC=YL_CN_PJL_5065;NS=2504;SAS_AF=0.0014;SVTYPE=DEL\tGT\t.\nX\t81652302\tSVA_umary_SVA_841\tC\t<INS:ME:SVA>\t.\tPASS\tAC=1;AF=0.0002649;AFR_AF=0;AMR_AF=0;AN=3775;CS=SVA_umary;EAS_AF=0;EUR_AF=0.0013;MEINFO=SVA,1362,1620,+;NS=2504;SAS_AF=0;SVLEN=258;SVTYPE=SVA;TSD=null\tGT\t0\nX\t81706625\tALU_umary_ALU_12695\tG\t<INS:ME:ALU>\t.\tPASS\tAC=25;AF=0.00662252;AFR_AF=0.009;AMR_AF=0.0057;AN=3775;CS=ALU_umary;EAS_AF=0.0039;EUR_AF=0;MEINFO=AluYb8,1,280,+;NS=2504;SAS_AF=0.0139;SVLEN=279;SVTYPE=ALU;TSD=null\tGT\t0\nX\t81831984\tYL_CN_MSL_4063\tT\t<CN0>\t100\tPASS\tAC=6;AF=0.0018543;AFR_AF=0.003;AMR_AF=0.0019;AN=2542;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0;END=81837662;EUR_AF=0.0039;NS=2504;SAS_AF=0;SVTYPE=DEL\tGT\t.\nX\t81901108\tBI_GS_DEL1_B2_P2979_406\tT\t<CN0>\t100\tPASS\tAC=14;AF=0.0280795;AFR_AF=0.0299;AMR_AF=0.0172;AN=2542;CIEND=-30,30;CIPOS=-30,30;CS=DEL_union;EAS_AF=0.0327;END=81902898;EUR_AF=0.0366;NS=2504;SAS_AF=0.0195;SVTYPE=DEL\tGT\t.\nX\t81944152\tUW_VH_4384\tC\t<CN0>\t100\tPASS\tAC=10;AF=0.0222517;AFR_AF=0.0229;AMR_AF=0.021;AN=2542;CIEND=0,250;CIPOS=-258,0;CS=DEL_union;EAS_AF=0.0157;END=81946346;EUR_AF=0.0313;MC=BI_GS_DEL1_B4_P2979_126;NS=2504;SAS_AF=0.0195;SVTYPE=DEL\tGT\t.\nX\t81982368\tBI_GS_DEL1_B2_P2979_450\tT\t<CN0>\t100\tPASS\tAC=614;AF=0.240795;AFR_AF=0.0738;AMR_AF=0.2328;AN=2542;CIEND=-58,59;CIPOS=-58,59;CS=DEL_union;EAS_AF=0.411;END=81988139;EUR_AF=0.3251;MC=UW_VH_1304,YL_CN_YRI_5605,EM_DL_DEL105913,UW_VH_5198;NS=2504;SAS_AF=0.2089;SVTYPE=DEL\tGT\t.\nX\t81985703\tYL_CN_GWD_5891\tC\t<CN0>\t100\tPASS\tAC=10;AF=0.00264901;AFR_AF=0.004;AMR_AF=0.0019;AN=2542;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0;END=82003431;EUR_AF=0.0065;NS=2504;SAS_AF=0;SVTYPE=DEL\tGT\t.\nX\t81997188\tDUP_gs.X_CNV_X_81997188_82010483\tG\t<CN0>,<CN2>\t.\tPASS\tAC=0,1;AF=0,0.0002649;AFR_AF=0,0;AMR_AF=0,0.0019;AN=3775;CS=DUP_gs;EAS_AF=0,0;END=82010483;EUR_AF=0,0;NS=2504;SAS_AF=0,0;SVTYPE=DUP\tGT\t0\nX\t82038473\tYL_CN_CHB_4689\tT\t<CN0>\t100\tPASS\tAC=10;AF=0.00264901;AFR_AF=0.003;AMR_AF=0.0019;AN=2542;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0.0026;END=82048134;EUR_AF=0.0052;NS=2504;SAS_AF=0;SVTYPE=DEL\tGT\t.\nX\t82199150\tBI_GS_DEL1_B5_P2980_149\tA\t<CN0>\t100\tPASS\tAC=12;AF=0.00397351;AFR_AF=0.002;AMR_AF=0.0057;AN=2542;CIEND=-37,37;CIPOS=-37,37;CS=DEL_union;EAS_AF=0;END=82208177;EUR_AF=0.0131;MC=YL_CN_TSI_4418,UW_VH_3424,EM_DL_DEL105919;NS=2504;SAS_AF=0;SVTYPE=DEL\tGT\t.\nX\t82276466\tBI_GS_DEL1_B3_P2980_6\tT\t<CN0>\t100\tPASS\tAC=6;AF=0.0015894;AFR_AF=0.003;AMR_AF=0;AN=2542;CIEND=-13,14;CIPOS=-13,14;CS=DEL_union;EAS_AF=0;END=82281774;EUR_AF=0.0039;NS=2504;SAS_AF=0;SVTYPE=DEL\tGT\t.\nX\t82484873\tBI_GS_DEL1_B1_P2980_262\tT\t<CN0>\t100\tPASS\tAC=6;AF=0.0254305;AFR_AF=0.0249;AMR_AF=0.0382;AN=2542;CIEND=-35,35;CIPOS=-35,35;CS=DEL_union;EAS_AF=0.0157;END=82487113;EUR_AF=0.0248;NS=2504;SAS_AF=0.0279;SVTYPE=DEL\tGT\t.\nX\t82696198\tL1_umary_LINE1_3079\tT\t<INS:ME:LINE1>\t.\tPASS\tAC=8;AF=0.00211921;AFR_AF=0;AMR_AF=0;AN=3775;CS=L1_umary;EAS_AF=0;EUR_AF=0;MEINFO=LINE1,1977,2411,+;NS=2504;SAS_AF=0.0111;SVLEN=434;SVTYPE=LINE1;TSD=null\tGT\t0\nX\t82696397\tALU_umary_ALU_12696\tT\t<INS:ME:ALU>\t.\tPASS\tAC=2;AF=0.0005298;AFR_AF=0;AMR_AF=0;AN=3775;CS=ALU_umary;EAS_AF=0.0026;EUR_AF=0;MEINFO=AluY,38,281,-;NS=2504;SAS_AF=0;SVLEN=243;SVTYPE=ALU;TSD=null\tGT\t0\nX\t82765591\tDEL_pindel_54017\tTCCGCACTCACCGGACTCCAGGATTCCTGCGCGCAGAAATCCAGGCCCCCAGCCTCGCTAGGGCGACCTTCCGCGCGACCTCACTTCGGCCCTCCTAGAGGAAA\tT\t.\tPASS\tAC=684;AF=0.181192;AFR_AF=0.2014;AMR_AF=0.1565;AN=3775;CS=DEL_pindel;EAS_AF=0.1937;END=82765694;EUR_AF=0.1606;NS=2504;SAS_AF=0.1797;SVTYPE=DEL\tGT\t0\nX\t82829510\tDEL_pindel_54019\tTTCAGTTAGTCAGGAGAAACAGGTTCAAGGCATCTCTTGTACACCATGACTGTAGTTAATAACAATGTATTGTAGACTTAAAAATTGCTAATAGAGTAGATTTTAAGTTTTCTCACCCCGCAGAAATGATAAATATGTGAGATAATGCATATGTTAATTAGTTTAATATAGCTATTTCACAAAATGTACATATTTTAAAACATCATGTTGAACACCAAAAATATGTAGAATTTTTATGTCAATTAATACTATTATAAGAATATGATTCCATTTCCAGCAATGTGGCAAACTAAATAACCTGAAAATCTTCCCTCTATCATACCTTTAGAAATGTGAAATTCTCTTATAATATATTCTTTCTCGGTATATATATATATAATATAAAATATTTAAACATGCAGTACTTAAATATACAGAAAATATATAGTATTCTCTCTATATATATTGAGAATATATTATAAGACAATTATAAGAGAATGTATTTAAGAGAGTATATATTATAAGAGAATTAAGAGCTCACATAAGAGCTCAGAAAAGAATAAAGAAACGCCTATAAGCCCCAAATGGAAAGGAAACTCAAAAATAGTGCAAAATGGTACAATTGTAGCTATCGCTGCCCTGGAGAAAGTTGATTGGTC\tT\t.\tPASS\tAC=928;AF=0.245828;AFR_AF=0.2493;AMR_AF=0.2099;AN=3775;CS=DEL_pindel;EAS_AF=0.2487;END=82830147;EUR_AF=0.2389;NS=2504;SAS_AF=0.2716;SVTYPE=DEL\tGT\t1\nX\t82907087\tDUP_gs.X_CNV_X_82907087_82929732\tT\t<CN0>,<CN2>\t.\tPASS\tAC=0,2;AF=0,0.0005298;AFR_AF=0,0.002;AMR_AF=0,0;AN=3775;CS=DUP_gs;EAS_AF=0,0;END=82929732;EUR_AF=0,0;NS=2504;SAS_AF=0,0;SVTYPE=DUP\tGT\t0\nX\t82911118\tBI_GS_DEL1_B2_P2980_376\tT\t<CN0>\t100\tPASS\tAC=9;AF=0.00238411;AFR_AF=0.003;AMR_AF=0.0019;AN=2542;CIEND=-12,12;CIPOS=-12,12;CS=DEL_union;EAS_AF=0.0026;END=82918079;EUR_AF=0.0039;NS=2504;SAS_AF=0;SVTYPE=DEL\tGT\t.\nX\t82959581\tBI_GS_DEL1_B2_P2980_394\tC\t<CN0>\t100\tPASS\tAC=7;AF=0.0018543;AFR_AF=0.002;AMR_AF=0.0038;AN=2542;CIEND=-4,4;CIPOS=-4,4;CS=DEL_union;EAS_AF=0;END=82975142;EUR_AF=0.0039;NS=2504;SAS_AF=0;SVTYPE=DEL\tGT\t.\nX\t83018200\tL1_umary_LINE1_3080\tA\t<INS:ME:LINE1>\t.\tPASS\tAC=2;AF=0.0005298;AFR_AF=0;AMR_AF=0;AN=3775;CS=L1_umary;EAS_AF=0;EUR_AF=0;MEINFO=LINE1,3504,5769,-;NS=2504;SAS_AF=0.0028;SVLEN=2265;SVTYPE=LINE1;TSD=null\tGT\t0\nX\t83026888\tDEL_pindel_54021\tATGAGTCTCACAAAGGCTCCAAGTTTGATGTAACTCTGCAACCCAGATGGACCTGGGGAAGACTCAAGGAGGCTACTGAGGCTGTGTGGTAAAGCTGACCTGGGGCTCAAGCTCAGGAGAT\tA\t.\tPASS\tAC=1158;AF=0.306755;AFR_AF=0.3001;AMR_AF=0.292;AN=3775;CS=DEL_pindel;EAS_AF=0.2932;END=83027008;EUR_AF=0.3068;NS=2504;SAS_AF=0.3412;SVTYPE=DEL\tGT\t1\nX\t83344649\tEM_DL_DEL105929\tG\t<CN0>\t100\tPASS\tAC=3;AF=0.00715232;AFR_AF=0.005;AMR_AF=0.0115;AN=2542;CIEND=-150,150;CIPOS=-150,150;CS=DEL_union;EAS_AF=0.0026;END=83347502;EUR_AF=0.0117;NS=2504;SAS_AF=0.007;SVTYPE=DEL\tGT\t.\nX\t83470608\tYL_CN_PEL_4360\tA\t<CN0>\t100\tPASS\tAC=8;AF=0.00211921;AFR_AF=0.002;AMR_AF=0.0038;AN=2542;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0;END=83488221;EUR_AF=0.0052;NS=2504;SAS_AF=0;SVTYPE=DEL\tGT\t.\nX\t83489877\tDUP_gs.X_CNV_X_83489877_83507931\tG\t<CN0>,<CN2>\t.\tPASS\tAC=0,1;AF=0,0.0002649;AFR_AF=0,0;AMR_AF=0,0;AN=3775;CS=DUP_gs;EAS_AF=0,0.0013;END=83507931;EUR_AF=0,0;NS=2504;SAS_AF=0,0;SVTYPE=DUP\tGT\t0\nX\t83796129\tBI_GS_DEL1_B4_P2981_110\tC\t<CN0>\t100\tPASS\tAC=8;AF=0.00238411;AFR_AF=0.002;AMR_AF=0;AN=2542;CIEND=-5,5;CIPOS=-5,5;CS=DEL_union;EAS_AF=0;END=83807679;EUR_AF=0.0065;MC=YL_CN_STU_4621;NS=2504;SAS_AF=0.0028;SVTYPE=DEL\tGT\t.\nX\t83820465\tUW_VH_17083\tA\t<CN0>\t100\tPASS\tAC=7;AF=0.0018543;AFR_AF=0.003;AMR_AF=0;AN=2542;CIEND=0,145;CIPOS=-138,0;CS=DEL_union;EAS_AF=0;END=83826042;EUR_AF=0.0052;NS=2504;SAS_AF=0;SVTYPE=DEL\tGT\t.\nX\t83832147\tDEL_pindel_54026\tTCAGGGATCTAGAACCAGAAATACCATTTGACCCAGCAATCCCATTACTGGGTATATACCCAAAGGATTATAAATCATTCTACTCTAAAGGCACATGCACATATGTTTATTGCAGCACTATTCACAATAGCAAAGACTTGGAACGAACCCAAATGTCCATCAATGATAGACTGGATAATGAAAATGTGGCACATACACAACATGGAATATTATGCAGCCATAAAAAAGATGAGTTCATGTCCTTTTCAGGGACATGGATGAAGCTGGAAACCATCATTCTCAGCAAACTAACGCAGGAACAGAAAACCAAACA\tT\t.\tPASS\tAC=4;AF=0.0010596;AFR_AF=0;AMR_AF=0;AN=3775;CS=DEL_pindel;EAS_AF=0.0039;END=83832459;EUR_AF=0.0013;NS=2504;SAS_AF=0;SVTYPE=DEL\tGT\t0\nX\t83856998\tBI_GS_DEL1_B5_P2981_568\tT\t<CN0>\t100\tPASS\tAC=19;AF=0.00741722;AFR_AF=0.009;AMR_AF=0.0038;AN=2542;CIEND=-44,45;CIPOS=-44,45;CS=DEL_union;EAS_AF=0.0026;END=83864607;EUR_AF=0.0196;MC=UW_VH_11211,YL_CN_PUR_5699;NS=2504;SAS_AF=0;SVTYPE=DEL\tGT\t.\nX\t83907426\tUW_VH_4213\tT\t<CN0>\t100\tPASS\tAC=70;AF=0.104106;AFR_AF=0.1117;AMR_AF=0.0878;AN=2542;CIEND=0,110;CIPOS=-212,0;CS=DEL_union;EAS_AF=0.1257;END=83908998;EUR_AF=0.0875;MC=BI_GS_DEL1_B1_P2981_478;NS=2504;SAS_AF=0.1003;SVTYPE=DEL\tGT\t.\nX\t84004697\tBI_GS_DEL1_B4_P2982_3\tG\t<CN0>\t100\tPASS\tAC=26;AF=0.0103311;AFR_AF=0.003;AMR_AF=0;AN=2542;CIEND=0,1;CIPOS=0,1;CS=DEL_union;EAS_AF=0;END=84011515;EUR_AF=0.0052;MC=YL_CN_BEB_3715;NS=2504;SAS_AF=0.0446;SVTYPE=DEL\tGT\t.\nX\t84095992\tUW_VH_5773\tC\t<CN0>\t100\tPASS\tAC=36;AF=0.0521854;AFR_AF=0.0489;AMR_AF=0.0592;AN=2542;CIEND=0,260;CIPOS=-305,0;CS=DEL_union;EAS_AF=0.0654;END=84097966;EUR_AF=0.0614;MC=BI_GS_DEL1_B4_P2982_18,YL_CN_CDX_3859;NS=2504;SAS_AF=0.0279;SVTYPE=DEL\tGT\t.\nX\t84148356\tBI_GS_DEL1_B5_P2982_105\tT\t<CN0>\t100\tPASS\tAC=8;AF=0.0169536;AFR_AF=0.0189;AMR_AF=0.0229;AN=2542;CIEND=-1,1;CIPOS=-1,1;CS=DEL_union;EAS_AF=0.0131;END=84150339;EUR_AF=0.0209;NS=2504;SAS_AF=0.0097;SVTYPE=DEL\tGT\t.\nX\t84482579\tDEL_pindel_54034\tTCTGAATGAGGAATTACAGAGAACAGAAGAACATGTTGAAAGTCACCAAGGGGATGCAATCGCAAAATACAGACTGTGGGGGACTCTA\tT\t.\tPASS\tAC=1477;AF=0.391258;AFR_AF=0.345;AMR_AF=0.3664;AN=3775;CS=DEL_pindel;EAS_AF=0.3822;END=84482666;EUR_AF=0.3943;NS=2504;SAS_AF=0.4805;SVTYPE=DEL\tGT\t1\nX\t84715318\tL1_umary_LINE1_3081\tT\t<INS:ME:LINE1>\t.\tPASS\tAC=1;AF=0.0002649;AFR_AF=0;AMR_AF=0;AN=3775;CS=L1_umary;EAS_AF=0;EUR_AF=0.0013;MEINFO=LINE1,1113,5478,-;NS=2504;SAS_AF=0;SVLEN=4365;SVTYPE=LINE1;TSD=null\tGT\t0\nX\t84782056\tBI_GS_DEL1_B4_P2982_107\tG\t<CN0>\t100\tPASS\tAC=15;AF=0.0288742;AFR_AF=0.0329;AMR_AF=0.0267;AN=2542;CIEND=-22,23;CIPOS=-22,23;CS=DEL_union;EAS_AF=0.034;END=84783772;EUR_AF=0.0352;NS=2504;SAS_AF=0.0125;SVTYPE=DEL\tGT\t.\nX\t84824449\tEM_DL_DEL105955\tA\t<CN0>\t100\tPASS\tAC=6;AF=0.0018543;AFR_AF=0.002;AMR_AF=0.0019;AN=2542;CIEND=-150,150;CIPOS=-150,150;CS=DEL_union;EAS_AF=0;END=84829237;EUR_AF=0.0039;NS=2504;SAS_AF=0.0014;SVTYPE=DEL\tGT\t.\nX\t84853876\tDEL_pindel_54039\tAACAAAAATAAATAGATAGAACTTAGTTAAACTAAAAACTTCTGTACAGCAAAAGAAATAATC\tA\t.\tPASS\tAC=261;AF=0.0691391;AFR_AF=0.0339;AMR_AF=0.0878;AN=3775;CS=DEL_pindel;EAS_AF=0.0929;END=84853938;EUR_AF=0.0862;NS=2504;SAS_AF=0.0613;SVTYPE=DEL\tGT\t0\nX\t84908626\tDEL_pindel_54042\tGTTTCATTTTTGTGCAGAAACTTCGTAGTTTGAAGTAGTTTCACTTGTTTATTTCTGCTTTTATTGTCTGTGTTTTTGCT\tG\t.\tPASS\tAC=369;AF=0.0977483;AFR_AF=0.1137;AMR_AF=0.0592;AN=3775;CS=DEL_pindel;EAS_AF=0.1217;END=84908705;EUR_AF=0.0927;NS=2504;SAS_AF=0.0836;SVTYPE=DEL\tGT\t1\nX\t84948672\tBI_GS_DEL1_B2_P2982_420\tA\t<CN0>\t100\tPASS\tAC=7;AF=0.00211921;AFR_AF=0.003;AMR_AF=0.0019;AN=2542;CIEND=-50,50;CIPOS=-50,50;CS=DEL_union;EAS_AF=0.0013;END=84956113;EUR_AF=0.0039;MC=YL_CN_CDX_3861;NS=2504;SAS_AF=0;SVTYPE=DEL\tGT\t.\nX\t85015786\tBI_GS_DEL1_B2_P2983_7\tT\t<CN0>\t100\tPASS\tAC=5;AF=0.00238411;AFR_AF=0.002;AMR_AF=0;AN=2542;CIEND=-3,4;CIPOS=-3,4;CS=DEL_union;EAS_AF=0.0013;END=85020608;EUR_AF=0.0065;MC=YL_CN_KHV_5050;NS=2504;SAS_AF=0.0014;SVTYPE=DEL\tGT\t.\nX\t85249719\tDEL_pindel_54049\tCAATGGTTGTAGGGATAGTTGCCATTTCAAAGTCAAAGCAAGCCAACAAAACAATAAAACTAAAACCAAACAA\tC\t.\tPASS\tAC=310;AF=0.0821192;AFR_AF=0.1037;AMR_AF=0.0515;AN=3775;CS=DEL_pindel;EAS_AF=0.1047;END=85249791;EUR_AF=0.0418;NS=2504;SAS_AF=0.0933;SVTYPE=DEL\tGT\t0\nX\t85285296\tALU_umary_ALU_12697\tT\t<INS:ME:ALU>\t.\tPASS\tAC=2;AF=0.0005298;AFR_AF=0.002;AMR_AF=0;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0;MEINFO=AluUndef,1,268,-;NS=2504;SAS_AF=0;SVLEN=267;SVTYPE=ALU;TSD=null\tGT\t0\nX\t85334913\tDEL_pindel_54052\tAACTAGAGGTCATTATGTTAAGTAAAATAAGCCAGGAATAAAAAGACAAATATCACACATTTGCACTCATATGTGGGAGCTAGAAAAGTTGATCTCATGGAGTTAGAATGTAGAGTGATAGTTGTCACAGGCTGGGAAGGGTAGGGTAGATGAAAAAAGGTTGGTTAATGGGTACAAACATACAGTTAGATAAAAGGAATACATTCCAACTTTTAACAGCACAGCAGGATTACTATCATTGATAATAATTTATTGTATATTTCAAAACAGCTAGAAGAGAAGATTTAAGTGTTCCCAACACAAAAAAATGATAAATGTTTGAGGTGATGGATAGCATAAATACCCTGATTTGATCATTACATATTGTATGCATGTATCAAAATATCACATATACCTCACAAATATGTATTATTATTTTGTATCAATAAATAATCTAATATCTTGTCTACAAGTAAATATTCCTGGTTATTTAAAAATGTGTGCTCTAATTAGGATTGAAACAAAATTTATAAATTCCACTTAATTGATACCTCTTTGGTCTTTGTGAATCTAGAACAGTATCTTCTCTC\tA\t.\tPASS\tAC=719;AF=0.190464;AFR_AF=0.1565;AMR_AF=0.2137;AN=3775;CS=DEL_pindel;EAS_AF=0.212;END=85335481;EUR_AF=0.1971;NS=2504;SAS_AF=0.1908;SVTYPE=DEL\tGT\t0\nX\t85358203\tDEL_pindel_54053\tACAGCCAGTGGTTACAACACTGGGCAAGACCCAGTGCTGTGCTGGCTTCACATGTGACC\tA\t.\tPASS\tAC=1799;AF=0.476556;AFR_AF=0.4955;AMR_AF=0.5935;AN=3775;CS=DEL_pindel;EAS_AF=0.3285;END=85358261;EUR_AF=0.5366;NS=2504;SAS_AF=0.4582;SVTYPE=DEL\tGT\t1\nX\t85434728\tL1_umary_LINE1_3082\tG\t<INS:ME:LINE1>\t.\tPASS\tAC=17;AF=0.00450331;AFR_AF=0;AMR_AF=0.0324;AN=3775;CS=L1_umary;EAS_AF=0;EUR_AF=0;MEINFO=LINE1,4889,6018,+;NS=2504;SAS_AF=0;SVLEN=1129;SVTYPE=LINE1;TSD=null\tGT\t0\nX\t85537769\tDEL_pindel_54055\tAGACACTTCTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTTAGTAGAGACGGGGTTTCACCGCTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCCC\tA\t.\tPASS\tAC=2455;AF=0.650331;AFR_AF=0.658;AMR_AF=0.6508;AN=3775;CS=DEL_pindel;EAS_AF=0.6531;END=85538081;EUR_AF=0.6214;MEINFO=AluYa5,1,281,-;NS=2504;SAS_AF=0.6671;SVTYPE=DEL_ALU\tGT\t0\nX\t85725040\tDEL_pindel_54058\tTTTCATTGATATTCTGCTGTGGCACTGTTAATCTTATTTTGATTGAAACAGAGTTCTGGACAGTAAAATTGATG\tT\t.\tPASS\tAC=1431;AF=0.379073;AFR_AF=0.5174;AMR_AF=0.3492;AN=3775;CS=DEL_pindel;EAS_AF=0.3089;END=85725113;EUR_AF=0.3094;NS=2504;SAS_AF=0.3565;SVTYPE=DEL\tGT\t1\nX\t85750744\tL1_umary_LINE1_3083\tA\t<INS:ME:LINE1>\t.\tPASS\tAC=2;AF=0.0005298;AFR_AF=0;AMR_AF=0;AN=3775;CS=L1_umary;EAS_AF=0.0026;EUR_AF=0;MEINFO=LINE1,4089,5258,+;NS=2504;SAS_AF=0;SVLEN=1169;SVTYPE=LINE1;TSD=null\tGT\t0\nX\t85781798\tL1_umary_LINE1_3084\tA\t<INS:ME:LINE1>\t.\tPASS\tAC=372;AF=0.098543;AFR_AF=0.0638;AMR_AF=0.0496;AN=3775;CS=L1_umary;EAS_AF=0.233;EUR_AF=0.0418;MEINFO=LINE1,2558,6019,+;NS=2504;SAS_AF=0.1003;SVLEN=3461;SVTYPE=LINE1;TSD=AGAAATGAAAATTAGA\tGT\t0\nX\t85788275\tDEL_pindel_54059\tCTGACTCCCCAAATTATTTTACATTTATTTTTATTAATTATCTGTCCCTTGCTTGAAACTCTTCTATGCCCTTTCATTGAAAGTAAAGTTAAAATTCCTTCACATAGAAAAAGTGTTTTTCTGATCTTCTTTAT\tC\t.\tPASS\tAC=559;AF=0.148079;AFR_AF=0.0937;AMR_AF=0.1469;AN=3775;CS=DEL_pindel;EAS_AF=0.1924;END=85788408;EUR_AF=0.1619;NS=2504;SAS_AF=0.163;SVTYPE=DEL\tGT\t1\nX\t85878760\tDEL_pindel_54061\tTAAAAAGTGGCGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGACGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACACGGTGAAACCCCGTCTCTACTAAAAATACAAAAATTAGCCGGGCATGGTGGCGCGTGCCTGTAGTCCCAGCTACACAGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGTCGAGATCGCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAAACTCCGTCTCAAAAAAACAAAACAAAAAAAAAAAAAAAAA\tT\t.\tPASS\tAC=1332;AF=0.352848;AFR_AF=0.331;AMR_AF=0.3168;AN=3775;CS=DEL_pindel;EAS_AF=0.4045;END=85879080;EUR_AF=0.3198;MEINFO=AluYg6a2,1,281,+;NS=2504;SAS_AF=0.39;SVTYPE=DEL_ALU\tGT\t0\nX\t85893094\tBI_GS_DEL1_B3_P2983_32\tT\t<CN0>\t100\tPASS\tAC=9;AF=0.00900662;AFR_AF=0.015;AMR_AF=0.0076;AN=2542;CIEND=-2,3;CIPOS=-2,3;CS=DEL_union;EAS_AF=0.0065;END=85895372;EUR_AF=0.0104;NS=2504;SAS_AF=0.0028;SVTYPE=DEL\tGT\t.\nX\t85934792\tDEL_pindel_54064\tGAGCCTGTGTGGTGTGCTGGTGCATATTTAACCTTTCCTCCTTACAGGAATGGGTCTGAGCTTAACGGTCATTATGTATTAAAATTTGGTAGGCTGTA\tG\t.\tPASS\tAC=479;AF=0.126887;AFR_AF=0.0997;AMR_AF=0.1279;AN=3775;CS=DEL_pindel;EAS_AF=0.1793;END=85934889;EUR_AF=0.1188;NS=2504;SAS_AF=0.117;SVTYPE=DEL\tGT\t0\nX\t85935550\tL1_umary_LINE1_3085\tT\t<INS:ME:LINE1>\t.\tPASS\tAC=5;AF=0.0013245;AFR_AF=0;AMR_AF=0;AN=3775;CS=L1_umary;EAS_AF=0;EUR_AF=0.0039;MEINFO=LINE1,5171,5904,+;NS=2504;SAS_AF=0.0028;SVLEN=733;SVTYPE=LINE1;TSD=null\tGT\t0\nX\t86036345\tBI_GS_DEL1_B2_P2984_19\tG\t<CN0>\t100\tPASS\tAC=22;AF=0.0368212;AFR_AF=0.0339;AMR_AF=0.0496;AN=2542;CIEND=-3,4;CIPOS=-3,4;CS=DEL_union;EAS_AF=0.0471;END=86038149;EUR_AF=0.0313;NS=2504;SAS_AF=0.0265;SVTYPE=DEL\tGT\t.\nX\t86089540\tUW_VH_7227\tA\t<CN0>\t100\tPASS\tAC=70;AF=0.0953642;AFR_AF=0.1176;AMR_AF=0.0802;AN=2542;CIEND=0,185;CIPOS=-246,0;CS=DEL_union;EAS_AF=0.0903;END=86090568;EUR_AF=0.111;MC=BI_GS_DEL1_B5_P2984_73;NS=2504;SAS_AF=0.0641;SVTYPE=DEL\tGT\t.\nX\t86095313\tALU_umary_ALU_12698\tT\t<INS:ME:ALU>\t.\tPASS\tAC=2;AF=0.0005298;AFR_AF=0;AMR_AF=0;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0.0026;MEINFO=AluY,2,258,-;NS=2504;SAS_AF=0;SVLEN=256;SVTYPE=ALU;TSD=null\tGT\t0\nX\t86137692\tDEL_pindel_54068\tGATATATATATATATATATATATATATATATATATATATATATATATATATAT\tG\t.\tPASS\tAC=2501;AF=0.662517;AFR_AF=0.67;AMR_AF=0.729;AN=3775;CS=DEL_pindel;EAS_AF=0.6584;END=86137744;EUR_AF=0.6358;NS=2504;SAS_AF=0.6365;SVTYPE=DEL\tGT\t1\nX\t86162347\tALU_umary_ALU_12699\tC\t<INS:ME:ALU>\t.\tPASS\tAC=2;AF=0.0005298;AFR_AF=0;AMR_AF=0;AN=3775;CS=ALU_umary;EAS_AF=0.0026;EUR_AF=0;MEINFO=AluYa3_3,5,281,+;NS=2504;SAS_AF=0;SVLEN=276;SVTYPE=ALU;TSD=null\tGT\t0\nX\t86234440\tDEL_pindel_54069\tGACTAAAAAACAAAAGCATATGATCATTTTAATTAATGTAGGAAAAGCATATGGAAAAATTCATCATCATTTCATGATGAAAACCTCTCAAGAAATTAGGTATAGAAAAAAAGTACCTCAACATAGTAAAGGCTATATTTTACAGGCCCAGAGCTAATATCAAAAATAAAAGTTGGAAGCTTTTCTTCTAAGATCAGGAACAAAACAAGAATGCT\tG\t.\tPASS\tAC=222;AF=0.058808;AFR_AF=0.0329;AMR_AF=0.0592;AN=3775;CS=DEL_pindel;EAS_AF=0.0641;END=86234654;EUR_AF=0.0822;NS=2504;SAS_AF=0.0641;SVTYPE=DEL\tGT\t0\nX\t86286771\tBI_GS_DEL1_B2_P2984_142\tG\t<CN0>\t100\tPASS\tAC=1097;AF=0.496159;AFR_AF=0.67;AMR_AF=0.6279;AN=2542;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.3599;END=86287222;EUR_AF=0.4295;MC=UW_VH_1307;NS=2504;SAS_AF=0.3733;SVTYPE=DEL\tGT\t.\nX\t86428039\tBI_GS_DEL1_B3_P2984_20\tG\t<CN0>\t100\tPASS\tAC=8;AF=0.00238411;AFR_AF=0.002;AMR_AF=0.0019;AN=2542;CIEND=-29,29;CIPOS=-29,29;CS=DEL_union;EAS_AF=0;END=86475920;EUR_AF=0.0039;MC=YL_CN_ITU_4718;NS=2504;SAS_AF=0.0042;SVTYPE=DEL\tGT\t.\nX\t86500636\tL1_umary_LINE1_3087\tT\t<INS:ME:LINE1>\t.\tPASS\tAC=24;AF=0.00635762;AFR_AF=0;AMR_AF=0;AN=3775;CS=L1_umary;EAS_AF=0;EUR_AF=0.0052;MEINFO=LINE1,5521,5884,-;NS=2504;SAS_AF=0.0279;SVLEN=363;SVTYPE=LINE1;TSD=TT\tGT\t0\nX\t86502244\tBI_GS_DEL2_B5_P0607_1\tA\t<CN0>\t100\tPASS\tAC=9;AF=0.00238411;AFR_AF=0.003;AMR_AF=0.0019;AN=2542;CIEND=-48,48;CIPOS=-48,48;CS=DEL_union;EAS_AF=0;END=86610468;EUR_AF=0.0065;MC=YL_CN_LWK_4239;NS=2504;SAS_AF=0;SVTYPE=DEL\tGT\t.\nX\t86533991\tBI_GS_DEL1_B2_P2984_247\tT\t<CN0>\t100\tPASS\tAC=16;AF=0.00503311;AFR_AF=0.014;AMR_AF=0.0019;AN=2542;CIEND=-1,1;CIPOS=-1,1;CS=DEL_union;EAS_AF=0;END=86538705;EUR_AF=0.0052;NS=2504;SAS_AF=0;SVTYPE=DEL\tGT\t.\nX\t86595640\tALU_umary_ALU_12700\tC\t<INS:ME:ALU>\t.\tPASS\tAC=42;AF=0.0111258;AFR_AF=0.0409;AMR_AF=0;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0.0013;MEINFO=AluYc1,4,281,-;NS=2504;SAS_AF=0;SVLEN=277;SVTYPE=ALU;TSD=AAGAAACTGAC\tGT\t0\nX\t86918439\tALU_umary_ALU_12701\tC\t<INS:ME:ALU>\t.\tPASS\tAC=2;AF=0.0005298;AFR_AF=0;AMR_AF=0;AN=3775;CS=ALU_umary;EAS_AF=0.0026;EUR_AF=0;MEINFO=AluUndef,21,281,+;NS=2504;SAS_AF=0;SVLEN=260;SVTYPE=ALU;TSD=null\tGT\t0\nX\t86927596\tALU_umary_ALU_12702\tT\t<INS:ME:ALU>\t.\tPASS\tAC=2;AF=0.0005298;AFR_AF=0;AMR_AF=0.0019;AN=3775;CS=ALU_umary;EAS_AF=0.0013;EUR_AF=0;MEINFO=AluY,4,280,+;NS=2504;SAS_AF=0;SVLEN=276;SVTYPE=ALU;TSD=null\tGT\t0\nX\t86932640\tYL_CN_STU_4624\tG\t<CN0>\t100\tPASS\tAC=9;AF=0.00238411;AFR_AF=0.002;AMR_AF=0.0019;AN=2542;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0;END=88168710;EUR_AF=0.0065;NS=2504;SAS_AF=0.0014;SVTYPE=DEL\tGT\t.\nX\t86990326\tUW_VH_11125\tT\t<CN0>\t100\tPASS\tAC=10;AF=0.00264901;AFR_AF=0.002;AMR_AF=0.0019;AN=2542;CIEND=0,103;CIPOS=-127,0;CS=DEL_union;EAS_AF=0;END=87382210;EUR_AF=0.0078;MC=YL_CN_IBS_4101,BI_GS_DEL2_B2_P0607_1;NS=2504;SAS_AF=0.0014;SVTYPE=DEL\tGT\t.\nX\t87230496\tL1_umary_LINE1_3088\tA\t<INS:ME:LINE1>\t.\tPASS\tAC=1;AF=0.0002649;AFR_AF=0;AMR_AF=0.0019;AN=3775;CS=L1_umary;EAS_AF=0;EUR_AF=0;MEINFO=LINE1,5355,5721,-;NS=2504;SAS_AF=0;SVLEN=366;SVTYPE=LINE1;TSD=null\tGT\t0\nX\t87574694\tDUP_gs.X_CNV_X_87574694_87592766\tT\t<CN0>,<CN2>\t.\tPASS\tAC=0,1;AF=0,0.0002649;AFR_AF=0,0;AMR_AF=0,0;AN=3775;CS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CAAAAAAAGAATGGAATTTAGTGCAAAATAACTGTCACATGATAAATACAAATTACTCTGTTGTCATCTATCTGCATGACCTGT\tC\t.\tPASS\tAC=83;AF=0.0219868;AFR_AF=0.011;AMR_AF=0.0439;AN=3775;CS=DEL_pindel;EAS_AF=0.034;END=91030810;EUR_AF=0.0144;NS=2504;SAS_AF=0.0167;SVTYPE=DEL\tGT\t0\nX\t91367532\tBI_GS_DEL1_B4_P2989_8\tA\t<CN0>\t100\tPASS\tAC=177;AF=0.156821;AFR_AF=0.2213;AMR_AF=0.1698;AN=2542;CIEND=-1,1;CIPOS=-1,1;CS=DEL_union;EAS_AF=0.0929;END=91368793;EUR_AF=0.1775;MC=EM_DL_DEL101181474,UW_VH_8548;NS=2504;SAS_AF=0.1031;SVTYPE=DEL\tGT\t.\nX\t91469248\tUW_VH_25158\tC\t<CN0>\t100\tPASS\tAC=9;AF=0.00238411;AFR_AF=0.002;AMR_AF=0;AN=2542;CIEND=0,228;CIPOS=-159,0;CS=DEL_union;EAS_AF=0.0013;END=91485830;EUR_AF=0.0065;MC=YL_CN_GIH_3462,EM_DL_DEL106142;NS=2504;SAS_AF=0.0014;SVTYPE=DEL\tGT\t.\nX\t91556720\tALU_umary_ALU_12708\tG\t<INS:ME:ALU>\t.\tPASS\tAC=134;AF=0.0354967;AFR_AF=0.0788;AMR_AF=0.0095;AN=3775;CS=ALU_umary;EAS_AF=0.0013;EUR_AF=0.0183;MEINFO=AluYc1,1,281,-;NS=2504;SAS_AF=0.0487;SVLEN=280;SVTYPE=ALU;TSD=null\tGT\t0\nX\t91678126\tBI_GS_DEL1_B2_P2989_108\tG\t<CN0>\t100\tPASS\tAC=362;AF=0.206093;AFR_AF=0.1007;AMR_AF=0.1908;AN=2542;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.1846;END=91680088;EUR_AF=0.3916;MC=YL_CN_MXL_3768,YL_CN_ITU_4722,YL_CN_KHV_5051,YL_CN_IBS_4105,UW_VH_1309;NS=2504;SAS_AF=0.1894;SVTYPE=DEL\tGT\t.\nX\t91692632\tL1_umary_LINE1_3090\tT\t<INS:ME:LINE1>\t.\tPASS\tAC=27;AF=0.00715232;AFR_AF=0.0259;AMR_AF=0.0019;AN=3775;CS=L1_umary;EAS_AF=0;EUR_AF=0;MEINFO=LINE1,5324,6018,-;NS=2504;SAS_AF=0;SVLEN=694;SVTYPE=LINE1;TSD=GCTTTTGAGTCTT\tGT\t0\nX\t91750760\tUW_VH_8096\tA\t<CN0>\t100\tPASS\tAC=388;AF=0.303576;AFR_AF=0.3739;AMR_AF=0.2863;AN=2542;CIEND=0,364;CIPOS=-301,0;CS=DEL_union;EAS_AF=0.267;END=91751796;EUR_AF=0.2977;MC=BI_GS_DEL1_B2_P2989_117;NS=2504;SAS_AF=0.2632;SVTYPE=DEL\tGT\t.\nX\t91805281\tALU_umary_ALU_12709\tA\t<INS:ME:ALU>\t.\tPASS\tAC=81;AF=0.0214569;AFR_AF=0;AMR_AF=0;AN=3775;CS=ALU_umary;EAS_AF=0.0406;EUR_AF=0.0039;MEINFO=AluUndef,4,278,+;NS=2504;SAS_AF=0.0655;SVLEN=274;SVTYPE=ALU;TSD=null\tGT\t0\nX\t91989147\tALU_umary_ALU_12710\tT\t<INS:ME:ALU>\t.\tPASS\tAC=1004;AF=0.26596;AFR_AF=0.2034;AMR_AF=0.1641;AN=3775;CS=ALU_umary;EAS_AF=0.5236;EUR_AF=0.1749;MEINFO=AluYa5,1,281,-;NS=2504;SAS_AF=0.2507;SVLEN=280;SVTYPE=ALU;TSD=AAAAAAATGCATGATTTT\tGT\t1\nX\t92133621\tDEL_pindel_54101\tGTGGAAACACCAAGTACACAACATATGGACCAAAGTAGGTTTATGACAACTCTGGAAATCAGTTAAGAAGCTGCAGCATCTAAGAGAACCCTAAGCCAAGAAAAAGCCACACTCAAAATGGTGATATGTTTTGTGGCATTTTTTCTTGCCCATGTCCCTACCCCCTCCCTGTTGTGTTGTGGCATAGTTGGGAGGAAGCCTCCTTAATTCCTAGTTTCTCAATACAGAAGAAAAACAGTAAAACTTGTTCACAATAATGTGGCTTGTCTTGGGCCTACCC\tG\t.\tPASS\tAC=866;AF=0.229404;AFR_AF=0.1834;AMR_AF=0.2328;AN=3775;CS=DEL_pindel;EAS_AF=0.2448;END=92133900;EUR_AF=0.2402;NS=2504;SAS_AF=0.2632;SVTYPE=DEL\tGT\t1\nX\t92270809\tBI_GS_DEL1_B3_P2990_5\tA\t<CN0>\t100\tPASS\tAC=8;AF=0.00238411;AFR_AF=0.003;AMR_AF=0.0019;AN=2542;CIEND=-29,30;CIPOS=-29,30;CS=DEL_union;EAS_AF=0.0013;END=92280493;EUR_AF=0.0052;MC=YL_CN_GWD_5898;NS=2504;SAS_AF=0;SVTYPE=DEL\tGT\t.\nX\t92309557\tBI_GS_DEL1_B5_P2990_63\tT\t<CN0>\t100\tPASS\tAC=18;AF=0.00609272;AFR_AF=0.015;AMR_AF=0.0038;AN=2542;CIEND=-18,19;CIPOS=-18,19;CS=DEL_union;EAS_AF=0.0013;END=92359120;EUR_AF=0.0065;MC=YL_CN_ACB_5111;NS=2504;SAS_AF=0;SVTYPE=DEL\tGT\t.\nX\t92394511\tUW_VH_23914\tC\t<CN0>\t100\tPASS\tAC=15;AF=0.0495364;AFR_AF=0.0538;AMR_AF=0.0382;AN=2542;CIEND=0,141;CIPOS=-151,0;CS=DEL_union;EAS_AF=0.0419;END=92395983;EUR_AF=0.0679;MC=BI_GS_DEL1_B5_P2990_89;NS=2504;SAS_AF=0.0404;SVTYPE=DEL\tGT\t.\nX\t92405974\tBI_GS_DEL1_B2_P2990_80\tA\t<CN0>\t100\tPASS\tAC=13;AF=0.0233113;AFR_AF=0.014;AMR_AF=0.0267;AN=2542;CIEND=-62,62;CIPOS=-62,62;CS=DEL_union;EAS_AF=0.017;END=92407886;EUR_AF=0.0457;NS=2504;SAS_AF=0.0167;SVTYPE=DEL\tGT\t.\nX\t92467551\tALU_umary_ALU_12711\tT\t<INS:ME:ALU>\t.\tPASS\tAC=4;AF=0.0010596;AFR_AF=0;AMR_AF=0.0038;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0.0026;MEINFO=AluUndef,1,276,-;NS=2504;SAS_AF=0;SVLEN=275;SVTYPE=ALU;TSD=CTATATATTTTT\tGT\t0\nX\t92525640\tDEL_pindel_54103\tTTATATACCAGCTCCCCAGGTGTAACAGTCTTTCCATGGACTCTCAATTCTGTTTCACTGAAATGTCAGTTCATTTCTGCACTAGCACCACACAATTTTACATATCATAGCATTACATTTTAACATCTGGTTTGTCAAGCTCCCCAACTAATTATTTTTAATTTTCTGGGTTCTATCAATACATATATATTGAGTAACTACTATGTGCAAGGAATTCTTATAGGGACTTGGTATACCTCTGTAAACAAAATTTCTGTCATTATGGTGCTTACATTCCAGTGAATATTTTAATTAATAAGCTCACGATTATTCCTGCATATAAATTTAAAAATAATATAATCAAGTTCTCCTCCTAAATCCTAGTTAGTAATTTTATAGAATAATTTGTGAAAAATCATATTATTGCATTATTTAATCTTTCTAAGTTCTAACTATTTATTGAAGTCTTTATTGTATTCTATAATCAGGC\tT\t.\tPASS\tAC=649;AF=0.171921;AFR_AF=0.1685;AMR_AF=0.1641;AN=3775;CS=DEL_pindel;EAS_AF=0.1767;END=92526108;EUR_AF=0.1658;NS=2504;SAS_AF=0.1838;SVTYPE=DEL\tGT\t1\nX\t92574087\tDEL_pindel_54104\tTCACCCAGTAGTCATTAAGGAGCAGGTTGTTCAGTTTTTTTTGCTGGCAAGGTGGCCGAATAGGAACAGCTCCAGTCTG\tT\t.\tPASS\tAC=505;AF=0.133775;AFR_AF=0.1117;AMR_AF=0.1527;AN=3775;CS=DEL_pindel;EAS_AF=0.1558;END=92574165;EUR_AF=0.1279;NS=2504;SAS_AF=0.1337;SVTYPE=DEL\tGT\t1\nX\t92590148\tALU_umary_ALU_12712\tT\t<INS:ME:ALU>\t.\tPASS\tAC=1;AF=0.0002649;AFR_AF=0;AMR_AF=0;AN=3775;CS=ALU_umary;EAS_AF=0.0013;EUR_AF=0;MEINFO=AluYc1,1,223,-;NS=2504;SAS_AF=0;SVLEN=222;SVTYPE=ALU;TSD=AATATACCTACTTATT\tGT\t0\nX\t92672301\tDEL_pindel_54106\tTTTTATATATATATATATACGTATATATATACACGTGTATATATATATATATATATATATATA\tT\t.\tPASS\tAC=924;AF=0.244768;AFR_AF=0.2024;AMR_AF=0.2595;AN=3775;CS=DEL_pindel;EAS_AF=0.2736;END=92672363;EUR_AF=0.2533;NS=2504;SAS_AF=0.2535;SVTYPE=DEL\tGT\t1\nX\t92721911\tUW_VH_15203\tA\t<CN0>\t100\tPASS\tAC=16;AF=0.0262252;AFR_AF=0.0359;AMR_AF=0.021;AN=2542;CIEND=0,289;CIPOS=-264,0;CS=DEL_union;EAS_AF=0.0131;END=92723931;EUR_AF=0.0339;MC=YL_CN_GWD_5900,BI_GS_DEL1_B5_P2990_325;NS=2504;SAS_AF=0.0223;SVTYPE=DEL\tGT\t.\nX\t92744087\tALU_umary_ALU_12713\tT\t<INS:ME:ALU>\t.\tPASS\tAC=194;AF=0.0513907;AFR_AF=0.005;AMR_AF=0.0782;AN=3775;CS=ALU_umary;EAS_AF=0.0955;EUR_AF=0.0457;MEINFO=AluYa5,1,281,-;NS=2504;SAS_AF=0.0557;SVLEN=280;SVTYPE=ALU;TSD=CCCAATTTTCTT\tGT\t0\nX\t92796294\tBI_GS_DEL1_B1_P2990_297\tA\t<CN0>\t100\tPASS\tAC=733;AF=0.290861;AFR_AF=0.2453;AMR_AF=0.1469;AN=2542;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.2788;END=92801506;EUR_AF=0.3042;MC=UW_VH_23412,UW_VH_18084,UW_VH_11048,EM_DL_DEL106244,YL_CN_PUR_5708,UW_VH_25309,UW_VH_2774,UW_VH_5594;NS=2504;SAS_AF=0.4582;SVTYPE=DEL\tGT\t.\nX\t92866378\tUW_VH_5707\tG\t<CN0>\t100\tPASS\tAC=14;AF=0.00397351;AFR_AF=0.003;AMR_AF=0;AN=2542;CIEND=0,233;CIPOS=-251,0;CS=DEL_union;EAS_AF=0.0105;END=92874876;EUR_AF=0.0052;MC=BI_GS_DEL1_B4_P2990_94,EM_DL_DEL106248,YL_CN_CHB_4695;NS=2504;SAS_AF=0;SVTYPE=DEL\tGT\t.\nX\t93149072\tDEL_pindel_54108\tGCCAGACTATTACAAACGTTACCTTAAGGGTCAAGATCTCTTAAGTCAGCTTGTGGTGAATGCTTTTTGGCCTGGGATTCATCCTTCCAGACAGTGGGCTCCCCTCTGGTCTTGGGCAGCTGCAGAAATGCTGTTCAAGAGTCAAGTTTTAAGAGTCAGGGACCTCAGGAGCCCACTTGATGCTGTACCCCCATATAGTGATGTTTGTACCTGAGGTAAAAGGCAAAGTCCCCTTTACTTTTTCCTCTGCTTTTCTCAAGCAGAAAGAGTTTTGCTCCATAGCCACCATAGCTGGTAGTGTGCTGAGTCTCATCTGAAACCAACAAGTCTCAGAGGCTCACCAAAGCCCTCCACGTAGTACCTGGGTATGGCTGCTGGCTTTTCAGGACCCAAGGGCTCTTGAGTTAGCAGGTGATAAAAGCTGGCAGGACTGTGTCCTTCCCTTAAAGGCAGCCAGTTTACTTCTGGCCCAGGGTATGTCTAGAAGTGTCAGCTGGGAGCTAAGGCCTGCAATGGGTGCATCGTGACTCTGACTAGTGCCCTATCTTACTGTGGCTGAGCTGTTATCCAAGATGCAAGACAAAGTTCTCCCAACTCTTCTCCCTCCTCTCCTCATGCGGAATGAAGGGGTCTCTTTTGGAGCTGCAAGCTCTGAAGCCTGGGGTTAAAAGATGGGCAATACCAGCACCCCCTTGGCTTCCCCATTTGATGTCTCAGTGTATCTCATTCCCCCCACCCCCCAGTCCACTGTCTCTAAGTATTGTTCAGCCCTAGGACTAGCCTAAGAGTTGCGGTCCTTATGGCCTAGTCTGACTCTCAAGTTTACCTAGAGACTGAGAGCACTTTGCCCCTCAGTGGCAAGTTTTGCACACAGTCAGTTTTGGA\tG\t.\tPASS\tAC=221;AF=0.058543;AFR_AF=0.0379;AMR_AF=0.1164;AN=3775;CS=DEL_pindel;EAS_AF=0.0563;END=93149956;EUR_AF=0.0535;NS=2504;SAS_AF=0.0529;SVTYPE=DEL\tGT\t1\nX\t93167765\tBI_GS_DEL1_B5_P2991_122\tT\t<CN0>\t100\tPASS\tAC=208;AF=0.236026;AFR_AF=0.2981;AMR_AF=0.2252;AN=2542;CIEND=-1,1;CIPOS=-1,1;CS=DEL_union;EAS_AF=0.1963;END=93168395;EUR_AF=0.2298;MC=UW_VH_7699;NS=2504;SAS_AF=0.2061;SVTYPE=DEL\tGT\t.\nX\t93186810\tBI_GS_DEL1_B3_P2991_6\tC\t<CN0>\t100\tPASS\tAC=114;AF=0.161325;AFR_AF=0.2074;AMR_AF=0.1336;AN=2542;CIEND=0,1;CIPOS=0,1;CS=DEL_union;EAS_AF=0.1479;END=93187985;EUR_AF=0.1332;MC=UW_VH_12284;NS=2504;SAS_AF=0.1616;SVTYPE=DEL\tGT\t.\nX\t93239768\tDEL_pindel_54111\tCATAAACTAAATAAATAGTTGTTATTTTAAACCACTAAGTTTGGGGGTGGTTTAATATGCAGAATAAGCTATATGCTACATCTGTATGAAATATCAGTTTGTTTTTATCCCAGAATTTATTCACCCAGCCAGTTACTTATTTGACTAATGGAAAAAACACCTCTTATGT\tC\t.\tPASS\tAC=251;AF=0.0664901;AFR_AF=0.0479;AMR_AF=0.0649;AN=3775;CS=DEL_pindel;EAS_AF=0.0759;END=93239936;EUR_AF=0.0783;NS=2504;SAS_AF=0.071;SVTYPE=DEL\tGT\t0\nX\t93245047\tBI_GS_DEL1_B1_P2991_126\tT\t<CN0>\t100\tPASS\tAC=21;AF=0.00900662;AFR_AF=0.003;AMR_AF=0.0095;AN=2542;CIEND=0,1;CIPOS=0,1;CS=DEL_union;EAS_AF=0.0039;END=93248285;EUR_AF=0.0261;MC=EM_DL_DEL106252,YL_CN_PUR_5709,UW_VH_3632;NS=2504;SAS_AF=0.0042;SVTYPE=DEL\tGT\t.\nX\t93362085\tALU_umary_ALU_12714\tA\t<INS:ME:ALU>\t.\tPASS\tAC=169;AF=0.0447682;AFR_AF=0.0359;AMR_AF=0.0344;AN=3775;CS=ALU_umary;EAS_AF=0.0249;EUR_AF=0.0875;MEINFO=AluUndef,17,281,-;NS=2504;SAS_AF=0.0404;SVLEN=264;SVTYPE=ALU;TSD=AAAATTTAAAAAAAAA\tGT\t1\nX\t93378325\tDEL_pindel_54114\tATCCAGGACTATATCTTTTCCTTCAGTGTGGCAAGTTCCCCTAGGCCTTGGATGGATCCAGAGGTGG\tA\t.\tPASS\tAC=561;AF=0.148609;AFR_AF=0.1555;AMR_AF=0.1489;AN=3775;CS=DEL_pindel;EAS_AF=0.1348;END=93378391;EUR_AF=0.1671;NS=2504;SAS_AF=0.1337;SVTYPE=DEL\tGT\t1\nX\t93380988\tALU_umary_ALU_12715\tT\t<INS:ME:ALU>\t.\tPASS\tAC=35;AF=0.00927152;AFR_AF=0.001;AMR_AF=0.0305;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0.0183;MEINFO=AluYc1,1,281,+;NS=2504;SAS_AF=0.0056;SVLEN=280;SVTYPE=ALU;TSD=null\tGT\t0\nX\t93395877\tALU_umary_ALU_12716\tC\t<INS:ME:ALU>\t.\tPASS\tAC=1;AF=0.0002649;AFR_AF=0;AMR_AF=0;AN=3775;CS=ALU_umary;EAS_AF=0.0013;EUR_AF=0;MEINFO=AluUndef,1,261,+;NS=2504;SAS_AF=0;SVLEN=260;SVTYPE=ALU;TSD=null\tGT\t0\nX\t93400917\tBI_GS_DEL1_B1_P2991_218\tA\t<CN0>\t100\tPASS\tAC=148;AF=0.0566887;AFR_AF=0.0409;AMR_AF=0.0076;AN=2542;CIEND=0,1;CIPOS=0,1;CS=DEL_union;EAS_AF=0.0916;END=93404725;EUR_AF=0.0117;MC=YL_CN_BEB_3722,EM_DL_DEL106253,UW_VH_1310;NS=2504;SAS_AF=0.1253;SVTYPE=DEL\tGT\t.\nX\t93410378\tDUP_gs.X_CNV_X_93410378_93418060\tC\t<CN0>,<CN2>\t.\tPASS\tAC=0,4;AF=0,0.0010596;AFR_AF=0,0.002;AMR_AF=0,0.0019;AN=3775;CS=DUP_gs;EAS_AF=0,0.0013;END=93418060;EUR_AF=0,0;NS=2504;SAS_AF=0,0;SVTYPE=DUP\tGT\t0\nX\t93412420\tDUP_gs.X_CNV_X_93412420_93417693\tA\t<CN0>,<CN2>\t.\tPASS\tAC=0,3;AF=0,0.0007947;AFR_AF=0,0.002;AMR_AF=0,0.0019;AN=3775;CS=DUP_gs;EAS_AF=0,0;END=93417693;EUR_AF=0,0;NS=2504;SAS_AF=0,0;SVTYPE=DUP\tGT\t0\nX\t93487027\tBI_GS_DEL1_B5_P2991_375\tA\t<CN0>\t100\tPASS\tAC=54;AF=0.116821;AFR_AF=0.1206;AMR_AF=0.124;AN=2542;CIEND=-17,18;CIPOS=-17,18;CS=DEL_union;EAS_AF=0.1165;END=93488017;EUR_AF=0.1188;NS=2504;SAS_AF=0.1045;SVTYPE=DEL\tGT\t.\nX\t93499017\tUW_VH_6037\tT\t<CN0>\t100\tPASS\tAC=39;AF=0.0691391;AFR_AF=0.0568;AMR_AF=0.063;AN=2542;CIEND=0,371;CIPOS=-268,0;CS=DEL_union;EAS_AF=0.0916;END=93500419;EUR_AF=0.0757;MC=BI_GS_DEL1_B1_P2991_279;NS=2504;SAS_AF=0.0599;SVTYPE=DEL\tGT\t.\nX\t93585400\tL1_umary_LINE1_3091\tG\t<INS:ME:LINE1>\t.\tPASS\tAC=1;AF=0.0002649;AFR_AF=0;AMR_AF=0;AN=3775;CS=L1_umary;EAS_AF=0;EUR_AF=0;MEINFO=LINE1,1,290,+;NS=2504;SAS_AF=0.0014;SVLEN=289;SVTYPE=LINE1;TSD=null\tGT\t0\nX\t93671787\tALU_umary_ALU_12717\tA\t<INS:ME:ALU>\t.\tPASS\tAC=13;AF=0.00344371;AFR_AF=0.012;AMR_AF=0.0019;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0;MEINFO=AluYa5,1,281,+;NS=2504;SAS_AF=0;SVLEN=280;SVTYPE=ALU;TSD=null\tGT\t0\nX\t93689630\tALU_umary_ALU_12719\tA\t<INS:ME:ALU>\t.\tPASS\tAC=56;AF=0.0148344;AFR_AF=0.0499;AMR_AF=0.0115;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0;MEINFO=AluYc2,9,281,-;NS=2504;SAS_AF=0;SVLEN=272;SVTYPE=ALU;TSD=null\tGT\t0\nX\t93729484\tDEL_pindel_54122\tAAGTTTCCTGAGGCCTCCTCAGCCCTGTGGAACTGTGAATCAATTAAACCTCTTTCCTTTATTAATTATGTGCTCTTGAGCAGTTCTTTATAGCAGCATAAGAATGAAGTAAGACATAAGCATTCTCAATACAAATAAGATAAGTATATAAAATAAAGCATAAGTTAATTAGCTGAATTCAAACATTCCACAATGTATACATGTTTCAGAACATTATGTTGTACATGATAAACACATACAATAAAAGAAAAAACAGGAAAAAAAAAACCCTTAAAATCAATGAGCTAACCCTGCCCTATCTCTAGGAATCTAGAAAGAAAGAACATTTTGAATCCAAAACATAAAGTAAGTATAGGAAAAAAAAAAAAAAACAGTAAGAGTGAAAATCAACAAATAGGGAAAGAGAGTAAGAGAATGTAACAAAAAGAGGGTTTAATGAACGATTAACAAAATTGACAAAATTCAAGCCAATGTTATCATTAATAAAGGAGAGAAGAAAAGGTTACCAATATTATGATTAAAAGTATAATAAGAAAATATTCTAAAAACTGCATACCAATACTCATGGTAATGTACAATTAAAATAGGTGTATGTTATGGTATGTTAAATGTTCTTTATGTT\tA\t.\tPASS\tAC=262;AF=0.069404;AFR_AF=0.0538;AMR_AF=0.0821;AN=3775;CS=DEL_pindel;EAS_AF=0.0746;END=93730105;EUR_AF=0.0796;NS=2504;SAS_AF=0.0655;SVTYPE=DEL\tGT\t0\nX\t93742968\tDEL_pindel_54123\tCTGGGCCCCTGTCTCAGATTAACAAGGTTTCCTTGGCATGTTAACTGACTCCATAATACAAATTATAAAGGTTACAAGAAGGTTTATGGAAATAATCTTATGGTCAAGATGATTAAAATCTTGTAGATTGTTTATAAGATATTGAGAGACAGATTTAATTGGCCTTGCACTGTCTTTAATAGAGGTCATTGTTTGTGAAATTGTCTGCTCTCAAAGAATAAAGGTTTTCACCTTTTTAAAAAAGAATCTTTATCACTTTGGTTAAATTAATGACTTATTTTATAATGATCTGTGATCATATTT\tC\t.\tPASS\tAC=1152;AF=0.305166;AFR_AF=0.2951;AMR_AF=0.3053;AN=3775;CS=DEL_pindel;EAS_AF=0.2997;END=93743270;EUR_AF=0.2911;NS=2504;SAS_AF=0.3398;SVTYPE=DEL\tGT\t1\nX\t93878376\tALU_umary_ALU_12720\tA\t<INS:ME:ALU>\t.\tPASS\tAC=8;AF=0.00211921;AFR_AF=0.008;AMR_AF=0;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0;MEINFO=AluYa5,3,280,-;NS=2504;SAS_AF=0;SVLEN=277;SVTYPE=ALU;TSD=null\tGT\t0\nX\t93963860\tBI_GS_DEL1_B2_P2991_448\tT\t<CN0>\t100\tPASS\tAC=10;AF=0.00344371;AFR_AF=0.005;AMR_AF=0.0019;AN=2542;CIEND=-7,7;CIPOS=-7,7;CS=DEL_union;EAS_AF=0;END=93971340;EUR_AF=0.0065;MC=YL_CN_IBS_4108,EM_DL_DEL106260;NS=2504;SAS_AF=0.0028;SVTYPE=DEL\tGT\t.\nX\t94092792\tDUP_gs.X_CNV_X_94092792_94098136\tT\t<CN0>,<CN2>\t.\tPASS\tAC=0,1;AF=0,0.0002649;AFR_AF=0,0;AMR_AF=0,0;AN=3775;CS=DUP_gs;EAS_AF=0,0.0013;END=94098136;EUR_AF=0,0;NS=2504;SAS_AF=0,0;SVTYPE=DUP\tGT\t0\nX\t94310595\tDUP_gs.X_CNV_X_94310595_94347882\tC\t<CN0>,<CN2>\t.\tPASS\tAC=0,5;AF=0,0.0013245;AFR_AF=0,0;AMR_AF=0,0;AN=3775;CS=DUP_gs;EAS_AF=0,0.0065;END=94347882;EUR_AF=0,0;NS=2504;SAS_AF=0,0;SVTYPE=DUP\tGT\t0\nX\t94345404\tDUP_gs.X_CNV_X_94345404_94394702\tC\t<CN0>,<CN2>\t.\tPASS\tAC=0,40;AF=0,0.010596;AFR_AF=0,0;AMR_AF=0,0.0592;AN=3775;CS=DUP_gs;EAS_AF=0,0.0065;END=94394702;EUR_AF=0,0.0013;MC=DUP_gs.X_CNV_X_94335813_94397650;NS=2504;SAS_AF=0,0.0042;SVTYPE=DUP\tGT\t0\nX\t94525650\tYL_CN_YRI_5614\tT\t<CN0>\t100\tPASS\tAC=8;AF=0.00211921;AFR_AF=0.003;AMR_AF=0;AN=2542;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0;END=94551246;EUR_AF=0.0065;NS=2504;SAS_AF=0;SVTYPE=DEL\tGT\t.\nX\t94577305\tBI_GS_DEL1_B1_P2992_274\tC\t<CN0>\t100\tPASS\tAC=22;AF=0.0569536;AFR_AF=0.0618;AMR_AF=0.0534;AN=2542;CIEND=-12,12;CIPOS=-12,12;CS=DEL_union;EAS_AF=0.0576;END=94578647;EUR_AF=0.0692;NS=2504;SAS_AF=0.039;SVTYPE=DEL\tGT\t.\nX\t94584364\tALU_umary_ALU_12721\tT\t<INS:ME:ALU>\t.\tPASS\tAC=15;AF=0.00397351;AFR_AF=0.014;AMR_AF=0.0019;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0;MEINFO=AluUndef,1,281,-;NS=2504;SAS_AF=0;SVLEN=280;SVTYPE=ALU;TSD=null\tGT\t0\nX\t94590803\tBI_GS_DEL1_B4_P2992_82\tA\t<CN0>\t100\tPASS\tAC=7;AF=0.00211921;AFR_AF=0.002;AMR_AF=0;AN=2542;CIEND=-16,16;CIPOS=-16,16;CS=DEL_union;EAS_AF=0;END=94595242;EUR_AF=0.0065;MC=YL_CN_CEU_5457;NS=2504;SAS_AF=0.0014;SVTYPE=DEL\tGT\t.\nX\t94603608\tDUP_gs.X_CNV_X_94603608_94632841\tA\t<CN0>,<CN2>\t.\tPASS\tAC=0,1;AF=0,0.0002649;AFR_AF=0,0;AMR_AF=0,0;AN=3775;CS=DUP_gs;EAS_AF=0,0;END=94632841;EUR_AF=0,0.0013;NS=2504;SAS_AF=0,0;SVTYPE=DUP\tGT\t0\nX\t94632493\tDEL_pindel_54128\tGATGGCTCATTAAGCTATGTAGCAAAAATAATTTTTTTGTGCTGCTCAAGAGGTAGGTAGGACATACAAGTATAAATTTTTCCTGTTATTTCATTTTTCTTCTGATCTTTATAGGGTTTTTATCCAGTATGCGTTAGAAGGAAGTATTTCAATAAAAATCCATTTCAAAAGAATTTTTGAAAAAGTTACTGTTGACTAGTTACTTCATTAGTGAACTCTGTTTAGCCTCCTCATGTTCCAAGTGATACATAGCATTTTGGGTTTCAGAGTTACTCACCAAAATATTTTGATAGATTTTCTTTTTAAGGCAAGAGATTTTTAGAGTAAATTAACAGGCTGTGTTAGTGAAAAGACTGGAGGT\tG\t.\tPASS\tAC=1179;AF=0.312318;AFR_AF=0.3161;AMR_AF=0.2958;AN=3775;CS=DEL_pindel;EAS_AF=0.2971;END=94632853;EUR_AF=0.3068;NS=2504;SAS_AF=0.3412;SVTYPE=DEL\tGT\t1\nX\t94642277\tUW_VH_22867\tT\t<CN0>\t100\tPASS\tAC=10;AF=0.00264901;AFR_AF=0.005;AMR_AF=0.0019;AN=2542;CIEND=0,321;CIPOS=-196,0;CS=DEL_union;EAS_AF=0;END=94651588;EUR_AF=0.0052;NS=2504;SAS_AF=0;SVTYPE=DEL\tGT\t.\nX\t94665933\tALU_umary_ALU_12722\tA\t<INS:ME:ALU>\t.\tPASS\tAC=1;AF=0.0002649;AFR_AF=0;AMR_AF=0;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0;MEINFO=AluUndef,10,280,-;NS=2504;SAS_AF=0.0014;SVLEN=270;SVTYPE=ALU;TSD=null\tGT\t0\nX\t94698229\tBI_GS_DEL1_B3_P2992_18\tG\t<CN0>\t100\tPASS\tAC=13;AF=0.00582781;AFR_AF=0.015;AMR_AF=0.0057;AN=2542;CIEND=0,1;CIPOS=0,1;CS=DEL_union;EAS_AF=0;END=94701973;EUR_AF=0.0039;MC=UW_VH_16117,YL_CN_GWD_5904;NS=2504;SAS_AF=0.0014;SVTYPE=DEL\tGT\t.\nX\t94718203\tBI_GS_DEL1_B4_P2992_99\tA\t<CN0>\t100\tPASS\tAC=8;AF=0.00211921;AFR_AF=0.002;AMR_AF=0;AN=2542;CIEND=-5,5;CIPOS=-5,5;CS=DEL_union;EAS_AF=0;END=94728013;EUR_AF=0.0065;NS=2504;SAS_AF=0.0014;SVTYPE=DEL\tGT\t.\nX\t94788004\tBI_GS_DEL2_B3_P0608_1\tT\t<CN0>\t100\tPASS\tAC=8;AF=0.00211921;AFR_AF=0.003;AMR_AF=0.0019;AN=2542;CIEND=-17,17;CIPOS=-17,17;CS=DEL_union;EAS_AF=0;END=94988129;EUR_AF=0.0052;MC=YL_CN_GWD_5905;NS=2504;SAS_AF=0;SVTYPE=DEL\tGT\t.\nX\t95014607\tBI_GS_DEL1_B2_P2993_4\tT\t<CN0>\t100\tPASS\tAC=9;AF=0.00503311;AFR_AF=0.008;AMR_AF=0.0057;AN=2542;CIEND=-48,49;CIPOS=-48,49;CS=DEL_union;EAS_AF=0.0013;END=95019687;EUR_AF=0.0091;NS=2504;SAS_AF=0;SVTYPE=DEL\tGT\t.\nX\t95031987\tBI_GS_DEL1_B3_P2993_3\tT\t<CN0>\t100\tPASS\tAC=7;AF=0.00238411;AFR_AF=0.004;AMR_AF=0.0019;AN=2542;CIEND=-12,13;CIPOS=-12,13;CS=DEL_union;EAS_AF=0;END=95037619;EUR_AF=0.0052;NS=2504;SAS_AF=0;SVTYPE=DEL\tGT\t.\nX\t95039235\tALU_umary_ALU_12723\tG\t<INS:ME:ALU>\t.\tPASS\tAC=22;AF=0.00582781;AFR_AF=0.0219;AMR_AF=0;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0;MEINFO=AluYa5,1,280,-;NS=2504;SAS_AF=0;SVLEN=279;SVTYPE=ALU;TSD=null\tGT\t0\nX\t95050841\tBI_GS_DEL1_B3_P2993_7\tG\t<CN0>\t100\tPASS\tAC=1292;AF=0.526358;AFR_AF=0.3928;AMR_AF=0.6011;AN=2542;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.3652;END=95051476;EUR_AF=0.7115;MC=UW_VH_1311;NS=2504;SAS_AF=0.6323;SVTYPE=DEL\tGT\t.\nX\t95145344\tL1_umary_LINE1_3092\tT\t<INS:ME:LINE1>\t.\tPASS\tAC=4;AF=0.0010596;AFR_AF=0.004;AMR_AF=0;AN=3775;CS=L1_umary;EAS_AF=0;EUR_AF=0;MEINFO=LINE1,4895,6001,-;NS=2504;SAS_AF=0;SVLEN=1106;SVTYPE=LINE1;TSD=null\tGT\t0\nX\t95180925\tDUP_gs.X_CNV_X_95180925_95188834\tC\t<CN0>,<CN2>\t.\tPASS\tAC=1,1;AF=0.0002649,0.0002649;AFR_AF=0,0;AMR_AF=0,0.0019;AN=3775;CS=DUP_gs;EAS_AF=0.0013,0;END=95188834;EUR_AF=0,0;NS=2504;SAS_AF=0,0;SVTYPE=CNV\tGT\t0\nX\t95180991\tEM_DL_DEL106277\tC\t<CN0>\t100\tPASS\tAC=7;AF=0.0018543;AFR_AF=0.002;AMR_AF=0;AN=2542;CIEND=-150,150;CIPOS=-150,150;CS=DEL_union;EAS_AF=0.0013;END=95189063;EUR_AF=0.0052;MC=BI_GS_DEL1_B2_P2993_80;NS=2504;SAS_AF=0;SVTYPE=DEL\tGT\t.\nX\t95187026\tALU_umary_ALU_12724\tT\t<INS:ME:ALU>\t.\tPASS\tAC=1;AF=0.0002649;AFR_AF=0;AMR_AF=0;AN=3775;CS=ALU_umary;EAS_AF=0.0013;EUR_AF=0;MEINFO=AluUndef,1,276,+;NS=2504;SAS_AF=0;SVLEN=275;SVTYPE=ALU;TSD=null\tGT\t0\nX\t95275776\tBI_GS_DEL1_B3_P2993_12\tA\t<CN0>\t100\tPASS\tAC=7;AF=0.00238411;AFR_AF=0.002;AMR_AF=0.0019;AN=2542;CIEND=-51,52;CIPOS=-51,52;CS=DEL_union;EAS_AF=0;END=95291113;EUR_AF=0.0039;MC=YL_CN_GIH_3466;NS=2504;SAS_AF=0.0042;SVTYPE=DEL\tGT\t.\nX\t95483886\tDUP_gs.X_CNV_X_95483886_95504382\tT\t<CN0>,<CN2>\t.\tPASS\tAC=0,2;AF=0,0.0005298;AFR_AF=0,0.002;AMR_AF=0,0;AN=3775;CS=DUP_gs;EAS_AF=0,0;END=95504382;EUR_AF=0,0;NS=2504;SAS_AF=0,0;SVTYPE=DUP\tGT\t0\nX\t95537355\tALU_umary_ALU_12725\tT\t<INS:ME:ALU>\t.\tPASS\tAC=298;AF=0.0789404;AFR_AF=0.2702;AMR_AF=0.0191;AN=3775;CS=ALU_umary;EAS_AF=0.0065;EUR_AF=0.0013;MEINFO=AluYa4_3,1,276,-;NS=2504;SAS_AF=0.0153;SVLEN=275;SVTYPE=ALU;TSD=TTACTATGCATATTTT\tGT\t0\nX\t95631241\tALU_umary_ALU_12726\tT\t<INS:ME:ALU>\t.\tPASS\tAC=2;AF=0.0005298;AFR_AF=0;AMR_AF=0;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0.0026;MEINFO=AluUndef,28,275,-;NS=2504;SAS_AF=0;SVLEN=247;SVTYPE=ALU;TSD=null\tGT\t0\nX\t95775838\tALU_umary_ALU_12727\tA\t<INS:ME:ALU>\t.\tPASS\tAC=16;AF=0.00423841;AFR_AF=0.013;AMR_AF=0.0057;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0;MEINFO=AluUndef,4,281,+;NS=2504;SAS_AF=0;SVLEN=277;SVTYPE=ALU;TSD=AGAAATAAGATGGGA\tGT\t0\nX\t96140250\tBI_GS_DEL1_B2_P2994_52\tG\t<CN0>\t100\tPASS\tAC=7;AF=0.0116556;AFR_AF=0.016;AMR_AF=0.0115;AN=2542;CIEND=-9,9;CIPOS=-9,9;CS=DEL_union;EAS_AF=0.0105;END=96143095;EUR_AF=0.0131;NS=2504;SAS_AF=0.0056;SVTYPE=DEL\tGT\t.\nX\t96168116\tL1_umary_LINE1_3093\tC\t<INS:ME:LINE1>\t.\tPASS\tAC=1;AF=0.0002649;AFR_AF=0.001;AMR_AF=0;AN=3775;CS=L1_umary;EAS_AF=0;EUR_AF=0;MEINFO=LINE1,3919,5811,-;NS=2504;SAS_AF=0;SVLEN=1892;SVTYPE=LINE1;TSD=TTCAAATATATTGCTTTC\tGT\t0\nX\t96522261\tALU_umary_ALU_12728\tA\t<INS:ME:ALU>\t.\tPASS\tAC=28;AF=0.00741722;AFR_AF=0.0249;AMR_AF=0.0057;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0;MEINFO=AluUndef,1,281,+;NS=2504;SAS_AF=0;SVLEN=280;SVTYPE=ALU;TSD=null\tGT\t0\nX\t96556140\tUW_VH_15270\tA\t<CN0>\t100\tPASS\tAC=52;AF=0.0810596;AFR_AF=0.1087;AMR_AF=0.0859;AN=2542;CIEND=0,269;CIPOS=-255,0;CS=DEL_union;EAS_AF=0.0602;END=96557208;EUR_AF=0.0744;MC=UW_VH_16360,BI_GS_DEL1_B3_P2994_22;NS=2504;SAS_AF=0.0682;SVTYPE=DEL\tGT\t.\nX\t96606710\tUW_VH_11323\tG\t<CN0>\t100\tPASS\tAC=40;AF=0.029404;AFR_AF=0.015;AMR_AF=0.0267;AN=2542;CIEND=0,196;CIPOS=-195,0;CS=DEL_union;EAS_AF=0.0157;END=96608737;EUR_AF=0.064;MC=YL_CN_TSI_4432,YL_CN_IBS_4111,BI_GS_DEL1_B2_P2994_249,EM_DL_DEL106293;NS=2504;SAS_AF=0.0292;SVTYPE=DEL\tGT\t.\nX\t96619122\tBI_GS_DEL1_B3_P2994_25\tC\t<CN0>\t100\tPASS\tAC=17;AF=0.00609272;AFR_AF=0.002;AMR_AF=0.0019;AN=2542;CIEND=-16,17;CIPOS=-16,17;CS=DEL_union;EAS_AF=0;END=96623156;EUR_AF=0.0039;MC=UW_VH_15874,YL_CN_BEB_3726;NS=2504;SAS_AF=0.0237;SVTYPE=DEL\tGT\t.\nX\t96672352\tYL_CN_CEU_5460\tC\t<CN0>\t100\tPASS\tAC=6;AF=0.0018543;AFR_AF=0.002;AMR_AF=0;AN=2542;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0;END=96680820;EUR_AF=0.0065;NS=2504;SAS_AF=0;SVTYPE=DEL\tGT\t.\nX\t96707626\tBI_GS_DEL1_B4_P2994_102\tT\t<CN0>\t100\tPASS\tAC=7;AF=0.0018543;AFR_AF=0.002;AMR_AF=0;AN=2542;CIEND=-16,16;CIPOS=-16,16;CS=DEL_union;EAS_AF=0.0013;END=96712886;EUR_AF=0.0052;NS=2504;SAS_AF=0;SVTYPE=DEL\tGT\t.\nX\t96763369\tDUP_gs.X_CNV_X_96763369_96831761\tT\t<CN0>,<CN2>\t.\tPASS\tAC=0,2;AF=0,0.0005298;AFR_AF=0,0;AMR_AF=0,0;AN=3775;CS=DUP_gs;EAS_AF=0,0.0013;END=96831761;EUR_AF=0,0.0013;NS=2504;SAS_AF=0,0;SVTYPE=DUP\tGT\t0\nX\t96784800\tALU_umary_ALU_12729\tA\t<INS:ME:ALU>\t.\tPASS\tAC=2;AF=0.0005298;AFR_AF=0;AMR_AF=0;AN=3775;CS=ALU_umary;EAS_AF=0.0026;EUR_AF=0;MEINFO=AluUndef,1,281,+;NS=2504;SAS_AF=0;SVLEN=280;SVTYPE=ALU;TSD=null\tGT\t0\nX\t96958277\tUW_VH_15451\tT\t<CN0>\t100\tPASS\tAC=13;AF=0.015894;AFR_AF=0.01;AMR_AF=0.0153;AN=2542;CIEND=0,190;CIPOS=-216,0;CS=DEL_union;EAS_AF=0.017;END=96960074;EUR_AF=0.0209;NS=2504;SAS_AF=0.0181;SVTYPE=DEL\tGT\t.\nX\t96970300\tBI_GS_DEL1_B4_P2994_131\tA\t<CN0>\t100\tPASS\tAC=8;AF=0.00238411;AFR_AF=0.003;AMR_AF=0.0019;AN=2542;CIEND=-50,51;CIPOS=-50,51;CS=DEL_union;EAS_AF=0.0013;END=96987034;EUR_AF=0.0052;MC=YL_CN_CHB_4701;NS=2504;SAS_AF=0;SVTYPE=DEL\tGT\t.\nX\t96995240\tALU_umary_ALU_12730\tA\t<INS:ME:ALU>\t.\tPASS\tAC=54;AF=0.0143046;AFR_AF=0.0538;AMR_AF=0;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0;MEINFO=AluYc1,7,281,-;NS=2504;SAS_AF=0;SVLEN=274;SVTYPE=ALU;TSD=CACCTGTTTTA\tGT\t0\nX\t97063505\tBI_GS_DEL1_B2_P2995_28\tA\t<CN0>\t100\tPASS\tAC=130;AF=0.164503;AFR_AF=0.1366;AMR_AF=0.1718;AN=2542;CIEND=-2,3;CIPOS=-2,3;CS=DEL_union;EAS_AF=0.1453;END=97064183;EUR_AF=0.2023;MC=UW_VH_2854;NS=2504;SAS_AF=0.1783;SVTYPE=DEL\tGT\t.\nX\t97145634\tUW_VH_9183\tT\t<CN0>\t100\tPASS\tAC=7;AF=0.00211921;AFR_AF=0.004;AMR_AF=0.0019;AN=2542;CIEND=0,160;CIPOS=-189,0;CS=DEL_union;EAS_AF=0;END=97151223;EUR_AF=0.0039;MC=BI_GS_DEL1_B1_P2995_95;NS=2504;SAS_AF=0;SVTYPE=DEL\tGT\t.\nX\t97167898\tBI_GS_DEL1_B5_P2995_159\tT\t<CN0>\t100\tPASS\tAC=385;AF=0.330596;AFR_AF=0.35;AMR_AF=0.3302;AN=2542;CIEND=0,1;CIPOS=0,1;CS=DEL_union;EAS_AF=0.3272;END=97168315;EUR_AF=0.3264;NS=2504;SAS_AF=0.312;SVTYPE=DEL\tGT\t.\nX\t97278651\tBI_GS_DEL1_B2_P2995_139\tG\t<CN0>\t100\tPASS\tAC=5;AF=0.00291391;AFR_AF=0.005;AMR_AF=0.0019;AN=2542;CIEND=-39,39;CIPOS=-39,39;CS=DEL_union;EAS_AF=0.0013;END=97281779;EUR_AF=0.0052;MC=YL_CN_IBS_4112;NS=2504;SAS_AF=0;SVTYPE=DEL\tGT\t.\nX\t97365889\tDEL_pindel_54150\tATCTCACTAGAATGTATCAAAAAGATCTTTACTGTATGTCAATGAAACCTTCACAGAATACCTTACAGAATGAGAAAGAAAGAACGTACAAATATTTGATGTCCCTACCATATGCCAGGCCTCATGCTTGCTACTTTATATATGTGTGATCTCTCCCTAATCTTCATAACAGCACTATGAAAACAAGAAAGTACTGGTTTAGAGTGGTTCTGTGTTTCATCCAATTCTGCCACTTACTATGTACGTACCACTGAACTTAGGACTCCAATAGAATCAACTCAGGCATACTTCCCTAGCCACAATTAGGAAAATTAATGAACACTGAAAACTGGAGATGGTTAGAGGAACCTCCTTAGCTACTCAGAGTTGTTCCCCATGATCTTTTCAGTCTGTTTTCAGAAACTTGCTTCATTATCAGAAAACTGCTCTGTATGCACAGCTTCTCTGAATGTGTCCTTCATTTACTTATCTAACCTGAAATTTGGTAGTTCCTAAAAAATTCTTTCTTTTTCTTGCTAGCATCTCAAGTGGACATTGTTTTGTTTTCCTTTCATAATCCAGGTAACTCAGAAGTTGAAATTGGTATCTTCCTTGTTCCTCAATATTACTTATAGACATTTGCTTCTCCTCCCTCTTGCTAAAACCCCTGTTTCTATTAGGATCACATAGTCATTATAGCTTGCCTCTTTTTCAATAGCATTAACCTGGAAAAATTTGAATCTAAATGATCAG\tA\t.\tPASS\tAC=217;AF=0.0574834;AFR_AF=0.0568;AMR_AF=0.0954;AN=3775;CS=DEL_pindel;EAS_AF=0.0288;END=97366620;EUR_AF=0.0666;NS=2504;SAS_AF=0.0515;SVTYPE=DEL\tGT\t0\nX\t97379824\tDEL_pindel_54151\tGATGTCCTCTCACTTATTGTTGCTATCTTTAATTTCAACAAATGTTTTGTACTTTTGCGTATGCAA\tG\t.\tPASS\tAC=525;AF=0.139073;AFR_AF=0.1306;AMR_AF=0.1393;AN=3775;CS=DEL_pindel;EAS_AF=0.1702;END=97379889;EUR_AF=0.1397;NS=2504;SAS_AF=0.117;SVTYPE=DEL\tGT\t0\nX\t97811557\tUW_VH_11949\tC\t<CN0>\t100\tPASS\tAC=25;AF=0.0611921;AFR_AF=0.0728;AMR_AF=0.0534;AN=2542;CIEND=0,251;CIPOS=-272,0;CS=DEL_union;EAS_AF=0.055;END=97812881;EUR_AF=0.0627;MC=BI_GS_DEL1_B5_P2995_687;NS=2504;SAS_AF=0.0557;SVTYPE=DEL\tGT\t.\nX\t97842864\tALU_umary_ALU_12731\tC\t<INS:ME:ALU>\t.\tPASS\tAC=1;AF=0.0002649;AFR_AF=0;AMR_AF=0;AN=3775;CS=ALU_umary;EAS_AF=0.0013;EUR_AF=0;MEINFO=AluUndef,7,281,-;NS=2504;SAS_AF=0;SVLEN=274;SVTYPE=ALU;TSD=null\tGT\t0\nX\t97938639\tBI_GS_DEL1_B5_P2995_791\tC\t<CN0>\t100\tPASS\tAC=4;AF=0.0124503;AFR_AF=0.015;AMR_AF=0.0057;AN=2542;CIEND=-16,17;CIPOS=-16,17;CS=DEL_union;EAS_AF=0.0157;END=97940652;EUR_AF=0.0117;NS=2504;SAS_AF=0.0111;SVTYPE=DEL\tGT\t.\nX\t98013275\tBI_GS_DEL1_B2_P2996_12\tT\t<CN0>\t100\tPASS\tAC=10;AF=0.00317881;AFR_AF=0.002;AMR_AF=0.0038;AN=2542;CIEND=-4,4;CIPOS=-4,4;CS=DEL_union;EAS_AF=0.0079;END=98017816;EUR_AF=0.0026;MC=UW_VH_6992;NS=2504;SAS_AF=0;SVTYPE=DEL\tGT\t.\nX\t98111872\tBI_GS_DEL1_B3_P2996_5\tA\t<CN0>\t100\tPASS\tAC=7;AF=0.00264901;AFR_AF=0.003;AMR_AF=0;AN=2542;CIEND=-18,19;CIPOS=-18,19;CS=DEL_union;EAS_AF=0;END=98116683;EUR_AF=0.0091;NS=2504;SAS_AF=0;SVTYPE=DEL\tGT\t.\nX\t98225074\tALU_umary_ALU_12732\tC\t<INS:ME:ALU>\t.\tPASS\tAC=41;AF=0.0108609;AFR_AF=0;AMR_AF=0.0095;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0.0431;MEINFO=AluYc1,1,279,-;NS=2504;SAS_AF=0.0042;SVLEN=278;SVTYPE=ALU;TSD=CATAGCTCATTTTTC\tGT\t0\nX\t98262844\tBI_GS_DEL1_B3_P2996_9\tT\t<CN0>\t100\tPASS\tAC=19;AF=0.00768212;AFR_AF=0.0169;AMR_AF=0;AN=2542;CIEND=-2,2;CIPOS=-2,2;CS=DEL_union;EAS_AF=0.0039;END=98267009;EUR_AF=0.0104;MC=YL_CN_GWD_5908,UW_VH_14838,EM_DL_DEL106316;NS=2504;SAS_AF=0.0014;SVTYPE=DEL\tGT\t.\nX\t98264302\tL1_umary_LINE1_3094\tT\t<INS:ME:LINE1>\t.\tPASS\tAC=802;AF=0.21245;AFR_AF=0.4347;AMR_AF=0.2099;AN=3775;CS=L1_umary;EAS_AF=0.0327;EUR_AF=0.2507;MEINFO=LINE1,3598,6011,-;NS=2504;SAS_AF=0.0543;SVLEN=2413;SVTYPE=LINE1;TSD=GGTACTTATTCTT\tGT\t0\nX\t98617505\tDUP_gs.X_CNV_X_98617505_98620548\tA\t<CN0>,<CN2>\t.\tPASS\tAC=9,3;AF=0.00238411,0.0007947;AFR_AF=0.008,0;AMR_AF=0,0;AN=3775;CS=DUP_gs;EAS_AF=0,0.0013;END=98620548;EUR_AF=0,0;NS=2504;SAS_AF=0.0014,0.0028;SVTYPE=CNV\tGT\t0\nX\t98617516\tBI_GS_DEL1_B3_P2996_20\tA\t<CN0>\t100\tPASS\tAC=11;AF=0.00609272;AFR_AF=0.012;AMR_AF=0.0019;AN=2542;CIEND=-1,2;CIPOS=-1,2;CS=DEL_union;EAS_AF=0.0039;END=98620599;EUR_AF=0.0091;MC=EM_DL_DEL106324,UW_VH_14109,YL_CN_YRI_5618;NS=2504;SAS_AF=0;SVTYPE=DEL\tGT\t.\nX\t98621706\tDEL_pindel_54159\tAAGAAGTTGAATCCCTGAATAGATCAATAACAAGTTCTGAAATCAAGGCAGTAATTAATAGCCTCCAGT\tA\t.\tPASS\tAC=1120;AF=0.296689;AFR_AF=0.2951;AMR_AF=0.2672;AN=3775;CS=DEL_pindel;EAS_AF=0.2893;END=98621774;EUR_AF=0.2911;NS=2504;SAS_AF=0.3343;SVTYPE=DEL\tGT\t1\nX\t98684605\tYL_CN_IBS_4113\tA\t<CN0>\t100\tPASS\tAC=8;AF=0.00238411;AFR_AF=0.003;AMR_AF=0.0019;AN=2542;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0;END=98814968;EUR_AF=0.0065;MC=BI_GS_DEL2_B2_P0609_1,BI_GS_DEL2_B3_P0609_1,YL_CN_GWD_5910,UW_VH_15566;NS=2504;SAS_AF=0;SVTYPE=DEL\tGT\t.\nX\t98760378\tDEL_pindel_54164\tTTGAATGAATGCCTCTGTCATAGAATCTGAAGACTTTTCACATTATGTATTTATGAGAAGTAACCTATACCTAACCTCCTTCTTCATTCACCTATAAAGATAGATTAATATCGTTAGTCAAGTGGCATTTTTTCTATAATTAAAATAACATTTCAGTAAAGATAAATTTATAATTATATGCTCCTATTGGAATTGATAAGTAGTACTTTAGTATTGGAAATGTGAAAACAA\tT\t.\tPASS\tAC=582;AF=0.154172;AFR_AF=0.1505;AMR_AF=0.145;AN=3775;CS=DEL_pindel;EAS_AF=0.1374;END=98760608;EUR_AF=0.1397;NS=2504;SAS_AF=0.1992;SVTYPE=DEL\tGT\t1\nX\t98785810\tBI_GS_DEL1_B2_P2996_368\tT\t<CN0>\t100\tPASS\tAC=45;AF=0.0368212;AFR_AF=0.0199;AMR_AF=0.0153;AN=2542;CIEND=0,1;CIPOS=0,1;CS=DEL_union;EAS_AF=0.089;END=98787896;EUR_AF=0.0431;MC=UW_VH_5702,YL_CN_JPT_4750;NS=2504;SAS_AF=0.0139;SVTYPE=DEL\tGT\t.\nX\t98793108\tDEL_pindel_54167\tATCACCTTCCCCCAGATCAACATAGAGATAAAAGGCACAATTTCCCAGTTCTCAGCTTCTTCCTGGAGATGGAAAGATTGGAGCAGAGTGTCTAATGATGCACCTTC\tA\t.\tPASS\tAC=749;AF=0.198411;AFR_AF=0.1874;AMR_AF=0.2023;AN=3775;CS=DEL_pindel;EAS_AF=0.2029;END=98793214;EUR_AF=0.2102;NS=2504;SAS_AF=0.1936;SVTYPE=DEL\tGT\t1\nX\t98810839\tUW_VH_21878\tG\t<CN0>\t100\tPASS\tAC=8;AF=0.0262252;AFR_AF=0.0249;AMR_AF=0.0267;AN=2542;CIEND=0,110;CIPOS=-97,0;CS=DEL_union;EAS_AF=0.0249;END=98812807;EUR_AF=0.0326;MC=BI_GS_DEL1_B5_P2996_562;NS=2504;SAS_AF=0.0223;SVTYPE=DEL\tGT\t.\nX\t99123367\tL1_umary_LINE1_3095\tT\t<INS:ME:LINE1>\t.\tPASS\tAC=1;AF=0.0002649;AFR_AF=0.001;AMR_AF=0;AN=3775;CS=L1_umary;EAS_AF=0;EUR_AF=0;MEINFO=LINE1,5509,6019,+;NS=2504;SAS_AF=0;SVLEN=510;SVTYPE=LINE1;TSD=AAAAATTTTAGGACTT\tGT\t0\nX\t99242032\tALU_umary_ALU_12733\tT\t<INS:ME:ALU>\t.\tPASS\tAC=3;AF=0.0007947;AFR_AF=0.003;AMR_AF=0;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0;MEINFO=AluYa5,1,281,-;NS=2504;SAS_AF=0;SVLEN=280;SVTYPE=ALU;TSD=null\tGT\t0\nX\t99285552\tUW_VH_22025\tT\t<CN0>\t100\tPASS\tAC=26;AF=0.0635762;AFR_AF=0.0648;AMR_AF=0.0515;AN=2542;CIEND=0,219;CIPOS=-138,0;CS=DEL_union;EAS_AF=0.0654;END=99287068;EUR_AF=0.0718;MC=BI_GS_DEL1_B5_P2997_206;NS=2504;SAS_AF=0.0599;SVTYPE=DEL\tGT\t.\nX\t99436064\tDEL_pindel_54175\tGGAAGGCCATATATATATATATATATATATATATATGTATCTCCTAATAGTTCT\tG\t.\tPASS\tAC=1035;AF=0.274172;AFR_AF=0.2742;AMR_AF=0.2844;AN=3775;CS=DEL_pindel;EAS_AF=0.2618;END=99436117;EUR_AF=0.2611;NS=2504;SAS_AF=0.2939;SVTYPE=DEL\tGT\t0\nX\t99505153\tBI_GS_DEL1_B1_P2997_307\tC\t<CN0>\t100\tPASS\tAC=5;AF=0.00450331;AFR_AF=0.004;AMR_AF=0.0038;AN=2542;CIEND=-6,7;CIPOS=-6,7;CS=DEL_union;EAS_AF=0.0013;END=99507489;EUR_AF=0.0078;NS=2504;SAS_AF=0.0056;SVTYPE=DEL\tGT\t.\nX\t99510840\tUW_VH_1313\tC\t<CN0>\t100\tPASS\tAC=1262;AF=0.511788;AFR_AF=0.0758;AMR_AF=0.458;AN=2542;CIEND=0,317;CIPOS=-434,0;CS=DEL_union;EAS_AF=0.8521;END=99512856;EUR_AF=0.4948;MC=BI_GS_DEL1_B2_P2997_227,YL_CN_CDX_3868,YL_CN_FIN_4333,YL_CN_JPT_4751;NS=2504;SAS_AF=0.8162;SVTYPE=DEL\tGT\t.\nX\t99802682\tDEL_pindel_54180\tCCAAGAGCAAACCAAAACCAAAATTAGTAGAAGAAAAGAAATCATAAGGATCAGAG\tC\t.\tPASS\tAC=984;AF=0.260662;AFR_AF=0.2532;AMR_AF=0.2519;AN=3775;CS=DEL_pindel;EAS_AF=0.2487;END=99802737;EUR_AF=0.265;NS=2504;SAS_AF=0.2855;SVTYPE=DEL\tGT\t1\nX\t99880024\tDEL_pindel_54183\tATGTTGGTCAGGCTACTCTCGAACTCCCGACCTCAGATGATCTGCCTGCCTTGGCCTCTCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCACC\tA\t.\tPASS\tAC=1036;AF=0.274437;AFR_AF=0.2572;AMR_AF=0.2615;AN=3775;CS=DEL_pindel;EAS_AF=0.267;END=99880118;EUR_AF=0.2807;NS=2504;SAS_AF=0.3092;SVTYPE=DEL\tGT\t0\nX\t100006797\tBI_GS_DEL1_B1_P2998_3\tG\t<CN0>\t100\tPASS\tAC=6;AF=0.00264901;AFR_AF=0.004;AMR_AF=0.0019;AN=2542;CIEND=-19,20;CIPOS=-19,20;CS=DEL_union;EAS_AF=0.0013;END=100010311;EUR_AF=0.0052;NS=2504;SAS_AF=0;SVTYPE=DEL\tGT\t.\nX\t100110945\tUW_VH_25091\tG\t<CN0>\t100\tPASS\tAC=8;AF=0.00211921;AFR_AF=0.002;AMR_AF=0.0019;AN=2542;CIEND=0,68;CIPOS=-68,0;CS=DEL_union;EAS_AF=0;END=100143035;EUR_AF=0.0065;MC=UW_VH_25042;NS=2504;SAS_AF=0;SVTYPE=DEL\tGT\t.\nX\t100297960\tBI_GS_DEL1_B4_P2998_46\tT\t<CN0>\t100\tPASS\tAC=6;AF=0.0018543;AFR_AF=0.003;AMR_AF=0.0019;AN=2542;CIEND=-25,25;CIPOS=-25,25;CS=DEL_union;EAS_AF=0;END=100304194;EUR_AF=0.0039;MC=YL_CN_CEU_5462;NS=2504;SAS_AF=0;SVTYPE=DEL\tGT\t.\nX\t100342156\tYL_CN_JPT_4753\tG\t<CN0>\t100\tPASS\tAC=4;AF=0.0015894;AFR_AF=0.002;AMR_AF=0;AN=2542;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0.0026;END=100348677;EUR_AF=0.0026;MC=UW_VH_21694;NS=2504;SAS_AF=0;SVTYPE=DEL\tGT\t.\nX\t100421325\tDEL_pindel_54185\tGGTAGAGATGGGGTTTCATCATGTTGGCCAGGATGGTCTTGATCTCTTGACCTCGGGATCCACCCGTCTCGGCCTCCCGAAGTGTTGGGATTACAGGCATGAGCCACCGTGCCCAGCCCTCTTTTAATTTTTTAACTCACTTAAGATTATATGGCAGTGCAAATAAGCCAAATGTAGTTATCTGAAAACATATTTTTTGAAGATTCTTCATGGCAAAAACCATAATAGTTAAATAAAGAATAGCTATTTTGCTTTGGTGCAAAACATGTCTAGAAGATAAAAGAAATGGAAAATTTGGTTTATTATTGCAGTTGTAAAAAAGTATTTTCTTTACCCAGTGTTTGTGTAGAATTGGTGGCATTATTAATATTGACTTAATGTTCAATACTAAAGAATACTAAAGTTGCTATTAGAGTTCTAACATATTTTTCCTTTTGTTTTTTGAGACGGAGTCTTACTCTGTTGCCAGGCTGGAGTGCAGTGGCGTGATCTTGGCTCACTGCAACCTCTGACTCCCTGGTTCAAGCGATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGATTACAGGCACATGCCACCACACCCAGCTAATTTTTGTGTTTTTA\tG\t.\tPASS\tAC=650;AF=0.172185;AFR_AF=0.1426;AMR_AF=0.2099;AN=3775;CS=DEL_pindel;EAS_AF=0.1571;END=100421929;EUR_AF=0.1841;NS=2504;SAS_AF=0.1894;SVTYPE=DEL\tGT\t1\nX\t100566274\tUW_VH_3613\tG\t<CN0>\t100\tPASS\tAC=190;AF=0.227815;AFR_AF=0.1994;AMR_AF=0.2252;AN=2542;CIEND=0,322;CIPOS=-376,0;CS=DEL_union;EAS_AF=0.2762;END=100567622;EUR_AF=0.2428;MC=BI_GS_DEL1_B3_P2998_14;NS=2504;SAS_AF=0.2019;SVTYPE=DEL\tGT\t.\nX\t100566804\tYL_CN_ITU_4727\tA\t<CN0>\t100\tPASS\tAC=5;AF=0.0015894;AFR_AF=0.002;AMR_AF=0;AN=2542;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0;END=100586945;EUR_AF=0.0039;NS=2504;SAS_AF=0.0014;SVTYPE=DEL\tGT\t.\nX\t100678121\tUW_VH_5774\tC\t<CN0>\t100\tPASS\tAC=8;AF=0.00768212;AFR_AF=0.009;AMR_AF=0.0057;AN=2542;CIEND=0,415;CIPOS=-427,0;CS=DEL_union;EAS_AF=0.0118;END=100680576;EUR_AF=0.0065;MC=YL_CN_CDX_3869;NS=2504;SAS_AF=0.0042;SVTYPE=DEL\tGT\t.\nX\t100833020\tDEL_pindel_54186\tGCTTCTATCATAAAATGATGTTGGATTTTACTAAAAGCTTTTCCCACATCTATTGAGATGATCATATGGTTTTTGTTTTTAATTCTCTTTATGTGGTGAATCACATTTATTGATTTGTGTATGTTGAACAAACCTTATACCCCAGGAATTGAGCCTACTTGATCCTGGTTAATTTTCTTTTTGATGTGTTGCTAGATTCAGTTTGCTAGTATTTTGCTGAGGATTTTTTCATCTATGTTCATCAGGGATATTAGCCTGTCATTTTCTTTTTTCATTCTGTCTTTGCCAGCTTTGGTACCAGGATGATACTGGCTTTGTAGAATGAGTTATGGAGGAGTCCCTCCTCCTTAATTTTCAGGAATAGTTTTAGTAGGATTGGTACTAGTTCCTCCTTGTACATCTGATAGAATATGGCTGTGAATCCATCTGGTCCAGGACTTTTTTGGCAGTAGTTTTTTTTTTTAATGACTGATTCAATTTCAGAACTCATTATTGATATGTTCAGGGTTTCAATTTCTTCCTGGTTCAAACTTGATAGGTTGTGTTTCCAATAGTGTATCCATTCCCTCTGGATTTTCTAGTTCGTGTGCATAGAGGTTTTCATAATAGTCTCTGAGGATGTTTTGTTTTTTTTTTGGTGGGATTGGTTGTAATGT\tG\t.\tPASS\tAC=741;AF=0.196291;AFR_AF=0.1864;AMR_AF=0.1832;AN=3775;CS=DEL_pindel;EAS_AF=0.2173;END=100833675;EUR_AF=0.1867;NS=2504;SAS_AF=0.2075;SVTYPE=DEL\tGT\t0\nX\t100986014\tBI_GS_DEL1_B2_P2998_387\tT\t<CN0>\t100\tPASS\tAC=7;AF=0.00211921;AFR_AF=0.003;AMR_AF=0.0019;AN=2542;CIEND=-42,43;CIPOS=-42,43;CS=DEL_union;EAS_AF=0;END=100990225;EUR_AF=0.0052;MC=YL_CN_ACB_5119;NS=2504;SAS_AF=0;SVTYPE=DEL\tGT\t.\nX\t101055330\tDUP_gs.X_CNV_X_101055330_101067156\tC\t<CN0>,<CN2>\t.\tPASS\tAC=0,31;AF=0,0.00821192;AFR_AF=0,0.004;AMR_AF=0,0.0115;AN=3775;CS=DUP_gs;EAS_AF=0,0;END=101067156;EUR_AF=0,0.0261;NS=2504;SAS_AF=0,0.0014;SVTYPE=DUP\tGT\t0\nX\t101155257\tDEL_pindel_54191\tGTGCAAAAGCTCTTTAGTTTAATTAGGTCTCAGCTATTTATCTTTGTTCTTAT\tG\t.\tPASS\tAC=1965;AF=0.52053;AFR_AF=0.674;AMR_AF=0.479;AN=3775;CS=DEL_pindel;EAS_AF=0.3848;END=101155309;EUR_AF=0.5627;NS=2504;SAS_AF=0.4359;SVTYPE=DEL\tGT\t1\nX\t101293973\tALU_umary_ALU_12734\tG\t<INS:ME:ALU>\t.\tPASS\tAC=98;AF=0.0259603;AFR_AF=0.0508;AMR_AF=0.0095;AN=3775;CS=ALU_umary;EAS_AF=0.0432;EUR_AF=0.0013;MEINFO=AluYa5,1,281,+;NS=2504;SAS_AF=0.0111;SVLEN=280;SVTYPE=ALU;TSD=AAAAAGCTTATCCACCACG\tGT\t0\nX\t101304548\tUW_VH_21600\tA\t<CN0>\t100\tPASS\tAC=46;AF=0.0964238;AFR_AF=0.0947;AMR_AF=0.0897;AN=2542;CIEND=0,295;CIPOS=-251,0;CS=DEL_union;EAS_AF=0.072;END=101307092;EUR_AF=0.1266;NS=2504;SAS_AF=0.0975;SVTYPE=DEL\tGT\t.\nX\t101359486\tDEL_pindel_54197\tTGTTTGTTGCCATTGCTTTTGGTGTTTTAGTCATGAAGTCTTTGCCCATGTCTATGTCCTGAATG\tT\t.\tPASS\tAC=1141;AF=0.302252;AFR_AF=0.3101;AMR_AF=0.292;AN=3775;CS=DEL_pindel;EAS_AF=0.2932;END=101359550;EUR_AF=0.2898;NS=2504;SAS_AF=0.3217;SVTYPE=DEL\tGT\t1\nX\t101364523\tL1_umary_LINE1_3096\tT\t<INS:ME:LINE1>\t.\tPASS\tAC=3;AF=0.0007947;AFR_AF=0;AMR_AF=0;AN=3775;CS=L1_umary;EAS_AF=0.0039;EUR_AF=0;MEINFO=LINE1,4159,5360,-;NS=2504;SAS_AF=0;SVLEN=1201;SVTYPE=LINE1;TSD=null\tGT\t0\nX\t101439260\tL1_umary_LINE1_3097\tA\t<INS:ME:LINE1>\t.\tPASS\tAC=63;AF=0.0166887;AFR_AF=0.001;AMR_AF=0;AN=3775;CS=L1_umary;EAS_AF=0.0576;EUR_AF=0;MEINFO=LINE1,4502,6007,+;NS=2504;SAS_AF=0.0251;SVLEN=1505;SVTYPE=LINE1;TSD=AAAACAAA\tGT\t0\nX\t101832232\tDUP_gs.X_CNV_X_101832232_101846317\tT\t<CN0>,<CN2>\t.\tPASS\tAC=2,3;AF=0.0005298,0.0007947;AFR_AF=0.002,0;AMR_AF=0,0;AN=3775;CS=DUP_gs;EAS_AF=0,0;END=101846317;EUR_AF=0,0;NS=2504;SAS_AF=0,0.0042;SVTYPE=CNV\tGT\t0\nX\t101833724\tDUP_gs.X_CNV_X_101833724_101843776\tA\t<CN0>,<CN2>\t.\tPASS\tAC=0,4;AF=0,0.0010596;AFR_AF=0,0;AMR_AF=0,0.0019;AN=3775;CS=DUP_gs;EAS_AF=0,0;END=101843776;EUR_AF=0,0;NS=2504;SAS_AF=0,0.0042;SVTYPE=DUP\tGT\t0\nX\t101958881\tBI_GS_DEL1_B3_P2999_19\tG\t<CN0>\t100\tPASS\tAC=4;AF=0.00503311;AFR_AF=0.006;AMR_AF=0.0038;AN=2542;CIEND=-10,11;CIPOS=-10,11;CS=DEL_union;EAS_AF=0.0039;END=101961314;EUR_AF=0.0091;NS=2504;SAS_AF=0.0014;SVTYPE=DEL\tGT\t.\nX\t102256681\tDUP_gs.X_CNV_X_102256681_102267528\tT\t<CN0>,<CN2>\t.\tPASS\tAC=0,1;AF=0,0.0002649;AFR_AF=0,0;AMR_AF=0,0;AN=3775;CS=DUP_gs;EAS_AF=0,0.0013;END=102267528;EUR_AF=0,0;NS=2504;SAS_AF=0,0;SVTYPE=DUP\tGT\t0\nX\t102272013\tBI_GS_DEL1_B3_P3000_8\tT\t<CN0>\t100\tPASS\tAC=7;AF=0.00264901;AFR_AF=0.003;AMR_AF=0.0019;AN=2542;CIEND=-13,14;CIPOS=-13,14;CS=DEL_union;EAS_AF=0.0013;END=102277302;EUR_AF=0.0039;MC=YL_CN_ITU_4728;NS=2504;SAS_AF=0.0028;SVTYPE=DEL\tGT\t.\nX\t102277916\tUW_VH_10691\tA\t<CN0>\t100\tPASS\tAC=10;AF=0.00370861;AFR_AF=0.003;AMR_AF=0.0095;AN=2542;CIEND=0,148;CIPOS=-165,0;CS=DEL_union;EAS_AF=0.0026;END=102283742;EUR_AF=0.0039;MC=YL_CN_CLM_3894;NS=2504;SAS_AF=0.0014;SVTYPE=DEL\tGT\t.\nX\t102333184\tDUP_gs.X_CNV_X_102333184_102383738\tG\t<CN0>,<CN2>\t.\tPASS\tAC=0,1;AF=0,0.0002649;AFR_AF=0,0;AMR_AF=0,0;AN=3775;CS=DUP_gs;EAS_AF=0,0;END=102383738;EUR_AF=0,0;NS=2504;SAS_AF=0,0.0014;SVTYPE=DUP\tGT\t0\nX\t102363189\tL1_umary_LINE1_3098\tA\t<INS:ME:LINE1>\t.\tPASS\tAC=594;AF=0.157351;AFR_AF=0.016;AMR_AF=0.1431;AN=3775;CS=L1_umary;EAS_AF=0.144;EUR_AF=0.2585;MEINFO=LINE1,5165,6018,+;NS=2504;SAS_AF=0.2716;SVLEN=853;SVTYPE=LINE1;TSD=AAAAGATAAAACTACA\tGT\t0\nX\t102625247\tALU_umary_ALU_12735\tT\t<INS:ME:ALU>\t.\tPASS\tAC=29;AF=0.00768212;AFR_AF=0;AMR_AF=0.0057;AN=3775;CS=ALU_umary;EAS_AF=0.0314;EUR_AF=0;MEINFO=AluYe5,1,265,-;NS=2504;SAS_AF=0.0028;SVLEN=264;SVTYPE=ALU;TSD=GTACTAAAATATTTCT\tGT\t0\nX\t102692005\tALU_umary_ALU_12736\tT\t<INS:ME:ALU>\t.\tPASS\tAC=189;AF=0.0500662;AFR_AF=0.1785;AMR_AF=0.0191;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0;MEINFO=AluYa5,1,281,-;NS=2504;SAS_AF=0;SVLEN=280;SVTYPE=ALU;TSD=CTTCTCAGCGTTTTTTATT\tGT\t0\nX\t102778753\tYL_CN_JPT_4755\tC\t<CN0>\t100\tPASS\tAC=7;AF=0.0018543;AFR_AF=0.002;AMR_AF=0;AN=2542;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0.0013;END=102786357;EUR_AF=0.0052;NS=2504;SAS_AF=0;SVTYPE=DEL\tGT\t.\nX\t102780054\tL1_umary_LINE1_3099\tT\t<INS:ME:LINE1>\t.\tPASS\tAC=68;AF=0.0180133;AFR_AF=0;AMR_AF=0;AN=3775;CS=L1_umary;EAS_AF=0.089;EUR_AF=0;MEINFO=LINE1,4878,6019,+;NS=2504;SAS_AF=0;SVLEN=1141;SVTYPE=LINE1;TSD=TAAAAGTGACAGTAGTT\tGT\t0\nX\t102808947\tBI_GS_DEL1_B5_P3000_651\tG\t<CN0>\t100\tPASS\tAC=8;AF=0.00264901;AFR_AF=0.002;AMR_AF=0;AN=2542;CIEND=-2,3;CIPOS=-2,3;CS=DEL_union;EAS_AF=0;END=102826414;EUR_AF=0.0091;MC=YL_CN_GIH_3471,UW_VH_19750;NS=2504;SAS_AF=0.0014;SVTYPE=DEL\tGT\t.\nX\t102856671\tBI_GS_DEL1_B2_P3000_423\tC\t<CN0>\t100\tPASS\tAC=48;AF=0.0246358;AFR_AF=0.0618;AMR_AF=0.0267;AN=2542;CIEND=0,1;CIPOS=0,1;CS=DEL_union;EAS_AF=0.0079;END=102858731;EUR_AF=0.0091;MC=UW_VH_9391;NS=2504;SAS_AF=0.0056;SVTYPE=DEL\tGT\t.\nX\t102862592\tL1_umary_LINE1_3100\tC\t<INS:ME:LINE1>\t.\tPASS\tAC=1;AF=0.0002649;AFR_AF=0;AMR_AF=0;AN=3775;CS=L1_umary;EAS_AF=0.0013;EUR_AF=0;MEINFO=LINE1,3317,5719,+;NS=2504;SAS_AF=0;SVLEN=2402;SVTYPE=LINE1;TSD=null\tGT\t0\nX\t103166571\tALU_umary_ALU_12737\tC\t<INS:ME:ALU>\t.\tPASS\tAC=91;AF=0.024106;AFR_AF=0.0877;AMR_AF=0.0019;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0.0026;MEINFO=AluYb8,5,281,+;NS=2504;SAS_AF=0;SVLEN=276;SVTYPE=ALU;TSD=TCCTC\tGT\t0\nX\t103171518\tDUP_gs.X_CNV_X_103171518_103211637\tG\t<CN0>,<CN2>\t.\tPASS\tAC=0,13;AF=0,0.00344371;AFR_AF=0,0;AMR_AF=0,0.0038;AN=3775;CS=DUP_gs;EAS_AF=0,0;END=103211637;EUR_AF=0,0.0104;NS=2504;SAS_AF=0,0.0042;SVTYPE=DUP\tGT\t0\nX\t103261177\tDUP_gs.X_CNV_X_103261177_103301346\tC\t<CN0>,<CN2>\t.\tPASS\tAC=0,59;AF=0,0.0156291;AFR_AF=0,0.002;AMR_AF=0,0.0172;AN=3775;CS=DUP_gs;EAS_AF=0,0;END=103301346;EUR_AF=0,0.0522;NS=2504;SAS_AF=0,0.0111;SVTYPE=DUP\tGT\t2\nX\t103402414\tDEL_pindel_54216\tGATTGCCCTGTTCTCTCCAGGCTGAGGCTGTAATACCTGATTCTAGGGACTGCTGATATGGAAATTACTACCACTCTGGCTGGAGTCAGAAGAGTATATTAAAGAGTCTCTTTGTACTGTCCTAAAATAAGCAAAATCCAACGTTTGCAGTTCTATGGACCACGCACTATGATAAGTGCTTTAAACCCATTTTGTTGTTATTGCTTCATCCTCACAATAGCCCTTTGCTGGTTCTTAAGTGTATTACCCTTTCCTGTCCTCTTTGTCTGCTTAAAGCAGCTAAGAAAACTCAGATTAGTCAGATTGCATATAAATCAATAACTTGCCCACGGTCACAGAGCTAATAACAAATAGAGCCAAGACTTAAACTCAGATACATTCAGATGTGTCTTGGTATTTCTCAAATATCACTGAGAAAAAGGCCACCATAAATTCTTTTCAAGTGCTCTCTCTCCCCCAACTCCCCACCCCAAGAATTGCCTGAATGCCCATACAGAAAGACTAGGTTCTCTTCAGAAGCAGAAGGGCAGAACCCACTAAGGCAAAGATCTCTCCCTTGAAGGCTGGCAGCCAAGGAGGTGACTATAGTAGGAATTGGCATAACCAGCTCACTC\tG\t.\tPASS\tAC=682;AF=0.180662;AFR_AF=0.1017;AMR_AF=0.2156;AN=3775;CS=DEL_pindel;EAS_AF=0.212;END=103403027;EUR_AF=0.1997;NS=2504;SAS_AF=0.2117;SVTYPE=DEL\tGT\t1\nX\t103468249\tDEL_pindel_54217\tACCATGCCAGGCCTAATTTATTATATATTAATTAAGCGTTGGCTGATCAAGGCAGCTTGGCCGGGCAG\tA\t.\tPASS\tAC=836;AF=0.221457;AFR_AF=0.1884;AMR_AF=0.2366;AN=3775;CS=DEL_pindel;EAS_AF=0.2186;END=103468316;EUR_AF=0.2272;NS=2504;SAS_AF=0.2535;SVTYPE=DEL\tGT\t1\nX\t103558687\tDEL_pindel_54219\tAGAGACAGGGTTTCACCATGTTGGCCAGGCTGGTCTTGAACTCCTGACCTTAGGTGATCCACCCGCCTTGGCCTCCCAAAGTGCTAGGATTACAGGCTTGAGCCACTGAGCCTGGCTAATTTTTTTTTTTTTTTTTTGTAGAGTCTGGGTTTTGCTGTGTTACCGAGGCTGGTCTCAAACTCCTGGACCCAAATGGCCTGCCTGCCTTGGCCTCCCAAAGCGTTGGGATTACAGGCGTGACCCACCTTGCCCTGCCTGTTTCTTTCTTTATTTTTTTCTTTCTTTTCTTTTTCTTTTTTTTTTT\tA\t.\tPASS\tAC=1062;AF=0.281325;AFR_AF=0.2682;AMR_AF=0.2729;AN=3775;CS=DEL_pindel;EAS_AF=0.2801;END=103558990;EUR_AF=0.2624;NS=2504;SAS_AF=0.3273;SVTYPE=DEL\tGT\t1\nX\t103608577\tBI_GS_DEL1_B1_P3001_349\tA\t<CN0>\t100\tPASS\tAC=85;AF=0.0553642;AFR_AF=0.1296;AMR_AF=0.0324;AN=2542;CIEND=-1,1;CIPOS=-1,1;CS=DEL_union;EAS_AF=0.0236;END=103610573;EUR_AF=0.0352;MC=YL_CN_ACB_5121,UW_VH_9152,YL_CN_GWD_5914,YL_CN_ESN_4471;NS=2504;SAS_AF=0.0237;SVTYPE=DEL\tGT\t.\nX\t103851252\tBI_GS_DEL1_B2_P3001_384\tC\t<CN0>\t100\tPASS\tAC=8;AF=0.00264901;AFR_AF=0.002;AMR_AF=0.0019;AN=2542;CIEND=-6,6;CIPOS=-6,6;CS=DEL_union;EAS_AF=0.0052;END=103858785;EUR_AF=0.0039;MC=EM_DL_DEL106471,YL_CN_KHV_5060;NS=2504;SAS_AF=0;SVTYPE=DEL\tGT\t.\nX\t104043583\tUW_VH_24018\tA\t<CN0>\t100\tPASS\tAC=73;AF=0.111788;AFR_AF=0.1097;AMR_AF=0.1336;AN=2542;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.089;END=104044601;EUR_AF=0.1084;NS=2504;SAS_AF=0.1267;SVTYPE=DEL\tGT\t.\nX\t104070748\tYL_CN_PUR_5717\tA\t<CN0>\t100\tPASS\tAC=8;AF=0.00264901;AFR_AF=0.003;AMR_AF=0.0057;AN=2542;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0;END=104084901;EUR_AF=0.0052;NS=2504;SAS_AF=0;SVTYPE=DEL\tGT\t.\nX\t104186065\tDUP_gs.X_CNV_X_104186065_104192446\tT\t<CN0>,<CN2>\t.\tPASS\tAC=1,2;AF=0.0002649,0.0005298;AFR_AF=0,0.002;AMR_AF=0,0;AN=3775;CS=DUP_gs;EAS_AF=0.0013,0;END=104192446;EUR_AF=0,0;NS=2504;SAS_AF=0,0;SVTYPE=CNV\tGT\t0\nX\t104261023\tBI_GS_DEL1_B4_P3002_46\tC\t<CN0>\t100\tPASS\tAC=7;AF=0.00211921;AFR_AF=0.002;AMR_AF=0.0019;AN=2542;CIEND=-1,2;CIPOS=-1,2;CS=DEL_union;EAS_AF=0.0013;END=104268501;EUR_AF=0.0052;MC=YL_CN_CHB_4704;NS=2504;SAS_AF=0;SVTYPE=DEL\tGT\t.\nX\t104362703\tL1_umary_LINE1_3101\tT\t<INS:ME:LINE1>\t.\tPASS\tAC=13;AF=0.00344371;AFR_AF=0.012;AMR_AF=0.0019;AN=3775;CS=L1_umary;EAS_AF=0;EUR_AF=0;MEINFO=LINE1,5618,6010,-;NS=2504;SAS_AF=0;SVLEN=392;SVTYPE=LINE1;TSD=null\tGT\t0\nX\t104389059\tUW_VH_17021\tA\t<CN0>\t100\tPASS\tAC=7;AF=0.00238411;AFR_AF=0.005;AMR_AF=0;AN=2542;CIEND=0,246;CIPOS=-210,0;CS=DEL_union;EAS_AF=0.0013;END=104394627;EUR_AF=0.0039;MC=YL_CN_YRI_5621,BI_GS_DEL1_B4_P3002_62;NS=2504;SAS_AF=0;SVTYPE=DEL\tGT\t.\nX\t104521995\tBI_GS_DEL1_B2_P3002_246\tC\t<CN0>\t100\tPASS\tAC=318;AF=0.30755;AFR_AF=0.3111;AMR_AF=0.2996;AN=2542;CIEND=-32,33;CIPOS=-32,33;CS=DEL_union;EAS_AF=0.2906;END=104522481;EUR_AF=0.329;NS=2504;SAS_AF=0.3036;SVTYPE=DEL\tGT\t.\nX\t104522103\tDEL_pindel_54225\tTCTCCTTTTCTGGATGACCCTGGCCTTTCCTAGCCTACCCAGCCCACCCTGGATGACATCTTTGTCTCTTATCTGCCTCTTTTAAATGTTTCAATGACCTGTTTTCTCTGCAGCTCATCTCCTCAGATCCTTGCTTTCTCCTGGGGTTAATCTAATGTCTCAATGAGCTAAAAAATTCATGACTGATAAAGACCAAAAATGCTTCTCTTCTCAGCTAACATATTTGCAATTTAATAGATATTTCAATTCTGTAACTCATAGGCATAACTAATGGTGGGAATTTCTGGGGACTTTGCAGGGCCTGTGGGGGGCATTTCCCAGAGTGTCACAATCTACCCTGCAGGTGGCTGCTTGTTCCTTCTAGAAACAAGGTCAACAATATTCATGACCTTGGGGAACTAGAAGAAAAAAAATCCTACTGAGGATCACTGAAAAAAAAAGGGCCTTGGATGTCAGTCCATAGAGTGA\tT\t.\tPASS\tAC=1100;AF=0.291391;AFR_AF=0.2881;AMR_AF=0.2863;AN=3775;CS=DEL_pindel;EAS_AF=0.2749;END=104522570;EUR_AF=0.2689;NS=2504;SAS_AF=0.3412;SVTYPE=DEL\tGT\t1\nX\t104573805\tUW_VH_19495\tA\t<CN0>\t100\tPASS\tAC=8;AF=0.00238411;AFR_AF=0.002;AMR_AF=0.0019;AN=2542;CIEND=0,234;CIPOS=-230,0;CS=DEL_union;EAS_AF=0;END=104587772;EUR_AF=0.0052;MC=YL_CN_ITU_4730;NS=2504;SAS_AF=0.0028;SVTYPE=DEL\tGT\t.\nX\t104740122\tL1_umary_LINE1_3102\tT\t<INS:ME:LINE1>\t.\tPASS\tAC=1;AF=0.0002649;AFR_AF=0;AMR_AF=0;AN=3775;CS=L1_umary;EAS_AF=0;EUR_AF=0;MEINFO=LINE1,5,5497,-;NS=2504;SAS_AF=0.0014;SVLEN=5492;SVTYPE=LINE1;TSD=null\tGT\t0\nX\t104773532\tALU_umary_ALU_12738\tT\t<INS:ME:ALU>\t.\tPASS\tAC=1;AF=0.0002649;AFR_AF=0;AMR_AF=0.0019;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0;MEINFO=AluUndef,15,281,-;NS=2504;SAS_AF=0;SVLEN=266;SVTYPE=ALU;TSD=null\tGT\t0\nX\t104775072\tALU_umary_ALU_12739\tC\t<INS:ME:ALU>\t.\tPASS\tAC=1;AF=0.0002649;AFR_AF=0.001;AMR_AF=0;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0;MEINFO=AluYc1,1,280,+;NS=2504;SAS_AF=0;SVLEN=279;SVTYPE=ALU;TSD=null\tGT\t0\nX\t104784764\tDEL_pindel_54229\tATATATATATATATATATAATATAAATATATTAGTTATATAATATATACATATATTATATATGATATATAATACATACATATATTATATATGATATATAATACATACATATATTATATATGATATATAATACATACATATATTATATATGATATATAATATATACATATATTATATATGATATATAAATATAGATTATATGTTAGAT\tA\t.\tPASS\tAC=1013;AF=0.268344;AFR_AF=0.2672;AMR_AF=0.2557;AN=3775;CS=DEL_pindel;EAS_AF=0.2762;END=104784970;EUR_AF=0.2702;NS=2504;SAS_AF=0.2688;SVTYPE=DEL\tGT\t0\nX\t104898178\tALU_umary_ALU_12740\tT\t<INS:ME:ALU>\t.\tPASS\tAC=229;AF=0.0606623;AFR_AF=0.2173;AMR_AF=0.021;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0;MEINFO=AluUndef,1,276,-;NS=2504;SAS_AF=0;SVLEN=275;SVTYPE=ALU;TSD=GCTTAAATCTTTT\tGT\t0\nX\t105116098\tUW_VH_15906\tA\t<CN0>\t100\tPASS\tAC=7;AF=0.0100662;AFR_AF=0.003;AMR_AF=0.0134;AN=2542;CIEND=0,145;CIPOS=-282,0;CS=DEL_union;EAS_AF=0.0065;END=105118222;EUR_AF=0.0209;NS=2504;SAS_AF=0.0097;SVTYPE=DEL\tGT\t.\nX\t105191156\tDEL_pindel_54236\tTGAAATACGGTGCAACACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTCCTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAGAAA\tT\t.\tPASS\tAC=1933;AF=0.512053;AFR_AF=0.659;AMR_AF=0.4237;AN=3775;CS=DEL_pindel;EAS_AF=0.4372;END=105191459;EUR_AF=0.4648;MEINFO=AluYa5,10,281,+;NS=2504;SAS_AF=0.5014;SVTYPE=DEL_ALU\tGT\t1\nX\t105204383\tUW_VH_10049\tA\t<CN0>\t100\tPASS\tAC=19;AF=0.0129801;AFR_AF=0.0219;AMR_AF=0.0153;AN=2542;CIEND=0,88;CIPOS=-228,0;CS=DEL_union;EAS_AF=0.0079;END=105208538;EUR_AF=0.0091;MC=BI_GS_DEL1_B3_P3003_15,YL_CN_MSL_4076;NS=2504;SAS_AF=0.0084;SVTYPE=DEL\tGT\t.\nX\t105268272\tDUP_gs.X_CNV_X_105268272_105333165\tG\t<CN0>,<CN2>\t.\tPASS\tAC=0,1;AF=0,0.0002649;AFR_AF=0,0.001;AMR_AF=0,0;AN=3775;CS=DUP_gs;EAS_AF=0,0;END=105333165;EUR_AF=0,0;NS=2504;SAS_AF=0,0;SVTYPE=DUP\tGT\t0\nX\t105330783\tDUP_gs.X_CNV_X_105330783_105356257\tA\t<CN0>,<CN2>\t.\tPASS\tAC=1,1;AF=0.0002649,0.0002649;AFR_AF=0,0;AMR_AF=0.0019,0.0019;AN=3775;CS=DUP_gs;EAS_AF=0,0;END=105356257;EUR_AF=0,0;NS=2504;SAS_AF=0,0;SVTYPE=CNV\tGT\t0\nX\t105334340\tDEL_pindel_54238\tTGAGCTCCTGATACAAAACTCATTTAAAAAATTAAAAATGTTACATTAGAAAATATTCACTTAATGCAAAAGAAGACA\tT\t.\tPASS\tAC=1748;AF=0.463046;AFR_AF=0.4955;AMR_AF=0.4714;AN=3775;CS=DEL_pindel;EAS_AF=0.4267;END=105334417;EUR_AF=0.3747;NS=2504;SAS_AF=0.5446;SVTYPE=DEL\tGT\t1\nX\t105347808\tDUP_gs.X_CNV_X_105347808_105402983\tG\t<CN0>,<CN2>\t.\tPASS\tAC=0,1;AF=0,0.0002649;AFR_AF=0,0;AMR_AF=0,0.0019;AN=3775;CS=DUP_gs;EAS_AF=0,0;END=105402983;EUR_AF=0,0;NS=2504;SAS_AF=0,0;SVTYPE=DUP\tGT\t0\nX\t105462699\tDUP_gs.X_CNV_X_105462699_105598337\tC\t<CN0>,<CN2>\t.\tPASS\tAC=0,1;AF=0,0.0002649;AFR_AF=0,0;AMR_AF=0,0;AN=3775;CS=DUP_gs;EAS_AF=0,0;END=105598337;EUR_AF=0,0;NS=2504;SAS_AF=0,0.0014;SVTYPE=DUP\tGT\t0\nX\t105477495\tUW_VH_16746\tA\t<CN0>\t100\tPASS\tAC=152;AF=0.201589;AFR_AF=0.2044;AMR_AF=0.1641;AN=2542;CIEND=0,253;CIPOS=-222,0;CS=DEL_union;EAS_AF=0.1911;END=105478143;EUR_AF=0.2245;MC=BI_GS_DEL1_B4_P3003_70;NS=2504;SAS_AF=0.2117;SVTYPE=DEL\tGT\t.\nX\t105521386\tUW_VH_18988\tT\t<CN0>\t100\tPASS\tAC=10;AF=0.00291391;AFR_AF=0.004;AMR_AF=0;AN=2542;CIEND=0,115;CIPOS=-91,0;CS=DEL_union;EAS_AF=0.0013;END=105530857;EUR_AF=0.0052;NS=2504;SAS_AF=0.0028;SVTYPE=DEL\tGT\t.\nX\t105522241\tDUP_gs.X_CNV_X_105522241_105528799\tA\t<CN0>,<CN2>\t.\tPASS\tAC=2,4;AF=0.0005298,0.0010596;AFR_AF=0.001,0;AMR_AF=0,0;AN=3775;CS=DUP_gs;EAS_AF=0,0.0026;END=105528799;EUR_AF=0,0.0013;NS=2504;SAS_AF=0.0014,0.0014;SVTYPE=CNV\tGT\t0\nX\t105543271\tDUP_gs.X_CNV_X_105543271_105553792\tA\t<CN0>,<CN2>\t.\tPASS\tAC=1,7;AF=0.0002649,0.0018543;AFR_AF=0.001,0;AMR_AF=0,0;AN=3775;CS=DUP_gs;EAS_AF=0,0.0052;END=105553792;EUR_AF=0,0.0026;NS=2504;SAS_AF=0,0.0014;SVTYPE=CNV\tGT\t0\nX\t105581887\tBI_GS_DEL1_B1_P3003_332\tT\t<CN0>\t100\tPASS\tAC=211;AF=0.230199;AFR_AF=0.2233;AMR_AF=0.2309;AN=2542;CIEND=-62,62;CIPOS=-62,62;CS=DEL_union;EAS_AF=0.2709;END=105582752;EUR_AF=0.2245;NS=2504;SAS_AF=0.2019;SVTYPE=DEL\tGT\t.\nX\t105614764\tDUP_gs.X_CNV_X_105614764_105629757\tC\t<CN0>,<CN2>\t.\tPASS\tAC=0,1;AF=0,0.0002649;AFR_AF=0,0;AMR_AF=0,0;AN=3775;CS=DUP_gs;EAS_AF=0,0;END=105629757;EUR_AF=0,0;NS=2504;SAS_AF=0,0.0014;SVTYPE=DUP\tGT\t0\nX\t105633238\tDUP_gs.X_CNV_X_105633238_105765456\tA\t<CN0>,<CN2>\t.\tPASS\tAC=0,1;AF=0,0.0002649;AFR_AF=0,0;AMR_AF=0,0;AN=3775;CS=DUP_gs;EAS_AF=0,0;END=105765456;EUR_AF=0,0;NS=2504;SAS_AF=0,0.0014;SVTYPE=DUP\tGT\t0\nX\t105661482\tDEL_pindel_54242\tCACACACACACACTATATATATATATATATATATATATATATATAGTGTGTGTGTGTATATATATATAT\tC\t.\tPASS\tAC=1079;AF=0.285828;AFR_AF=0.2692;AMR_AF=0.2844;AN=3775;CS=DEL_pindel;EAS_AF=0.267;END=105661550;EUR_AF=0.3016;NS=2504;SAS_AF=0.3134;SVTYPE=DEL\tGT\t1\nX\t105807018\tBI_GS_DEL1_B4_P3003_112\tC\t<CN0>\t100\tPASS\tAC=356;AF=0.218278;AFR_AF=0.4826;AMR_AF=0.1641;AN=2542;CIEND=0,1;CIPOS=0,1;CS=DEL_union;EAS_AF=0.1021;END=105807804;EUR_AF=0.1319;MC=UW_VH_6544,EM_DL_DEL101184375;NS=2504;SAS_AF=0.1045;SVTYPE=DEL\tGT\t.\nX\t105839090\tDEL_pindel_54246\tTTATTTCTGGCTTAATTCCACTGCAGACAAAGAACATATTCTGTGAATTCAGCCAATCAAAATTTATTGAGACTTGCTTTGTGGCCCAGCACATGGTCAGTTTTGATAAATAACCTACATACACTTGAATGTGCATTCTACATTTATTGCATGCAATGTTCTAAATATATTAGCTAGGACTTACCTGTTAGTCTTCTTATCCATTCTTCCACATCCACACTTTTCTTTATCTGCTTCTTTTACCAGTTACTGGAGGAGAGGTGCTAAAATTTTCAACCATGCTTATAGGTTTATCTATTTATATTTATATTTATATTTAGAGTTCTGTCAGTTTTCACTTTTTG\tT\t.\tPASS\tAC=402;AF=0.10649;AFR_AF=0.0708;AMR_AF=0.1164;AN=3775;CS=DEL_pindel;EAS_AF=0.1204;END=105839433;EUR_AF=0.1136;NS=2504;SAS_AF=0.1267;SVTYPE=DEL\tGT\t0\nX\t105886631\tALU_umary_ALU_12741\tG\t<INS:ME:ALU>\t.\tPASS\tAC=16;AF=0.00423841;AFR_AF=0.016;AMR_AF=0;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0;MEINFO=AluYc1,1,281,+;NS=2504;SAS_AF=0;SVLEN=280;SVTYPE=ALU;TSD=AAGAAATTTTTG\tGT\t0\nX\t105938262\tBI_GS_DEL1_B5_P3003_730\tA\t<CN0>\t100\tPASS\tAC=6;AF=0.0018543;AFR_AF=0.003;AMR_AF=0.0019;AN=2542;CIEND=-7,7;CIPOS=-7,7;CS=DEL_union;EAS_AF=0;END=105949917;EUR_AF=0.0039;MC=YL_CN_LWK_4256;NS=2504;SAS_AF=0;SVTYPE=DEL\tGT\t.\nX\t105938835\tBI_GS_DEL1_B3_P3003_38\tC\t<CN0>\t100\tPASS\tAC=133;AF=0.197351;AFR_AF=0.1765;AMR_AF=0.1927;AN=2542;CIEND=-7,7;CIPOS=-7,7;CS=DEL_union;EAS_AF=0.2199;END=105939505;EUR_AF=0.1997;NS=2504;SAS_AF=0.2033;SVTYPE=DEL\tGT\t.\nX\t106094120\tUW_VH_11528\tA\t<CN0>\t100\tPASS\tAC=9;AF=0.00344371;AFR_AF=0.007;AMR_AF=0.0019;AN=2542;CIEND=0,89;CIPOS=-52,0;CS=DEL_union;EAS_AF=0.0013;END=106099495;EUR_AF=0.0052;NS=2504;SAS_AF=0;SVTYPE=DEL\tGT\t.\nX\t106289379\tBI_GS_DEL1_B2_P3004_156\tA\t<CN0>\t100\tPASS\tAC=8;AF=0.00211921;AFR_AF=0.003;AMR_AF=0.0019;AN=2542;CIEND=-47,47;CIPOS=-47,47;CS=DEL_union;EAS_AF=0;END=106295634;EUR_AF=0.0052;MC=YL_CN_PEL_4370;NS=2504;SAS_AF=0;SVTYPE=DEL\tGT\t.\nX\t106332801\tBI_GS_DEL1_B3_P3004_11\tC\t<CN0>\t100\tPASS\tAC=8;AF=0.00238411;AFR_AF=0.004;AMR_AF=0.0019;AN=2542;CIEND=-25,26;CIPOS=-25,26;CS=DEL_union;EAS_AF=0;END=106338582;EUR_AF=0.0052;MC=YL_CN_ESN_4474;NS=2504;SAS_AF=0;SVTYPE=DEL\tGT\t.\nX\t106341533\tUW_VH_13349\tT\t<CN0>\t100\tPASS\tAC=13;AF=0.0447682;AFR_AF=0.0508;AMR_AF=0.0534;AN=2542;CIEND=0,239;CIPOS=-187,0;CS=DEL_union;EAS_AF=0.038;END=106342784;EUR_AF=0.0392;MC=BI_GS_DEL1_B2_P3004_185;NS=2504;SAS_AF=0.0432;SVTYPE=DEL\tGT\t.\nX\t106530047\tDUP_gs.X_CNV_X_106530047_106606130\tG\t<CN0>,<CN2>\t.\tPASS\tAC=0,1;AF=0,0.0002649;AFR_AF=0,0.001;AMR_AF=0,0;AN=3775;CS=DUP_gs;EAS_AF=0,0;END=106606130;EUR_AF=0,0;NS=2504;SAS_AF=0,0;SVTYPE=DUP\tGT\t0\nX\t106585621\tALU_umary_ALU_12742\tT\t<INS:ME:ALU>\t.\tPASS\tAC=21;AF=0.00556291;AFR_AF=0.0209;AMR_AF=0;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0;MEINFO=AluUndef,1,277,-;NS=2504;SAS_AF=0;SVLEN=276;SVTYPE=ALU;TSD=null\tGT\t0\nX\t106595841\tALU_umary_ALU_12743\tA\t<INS:ME:ALU>\t.\tPASS\tAC=7;AF=0.0018543;AFR_AF=0.007;AMR_AF=0;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0;MEINFO=AluUndef,41,279,-;NS=2504;SAS_AF=0;SVLEN=238;SVTYPE=ALU;TSD=TCCA\tGT\t0\nX\t106628964\tDEL_pindel_54253\tATTAAGAGTAGAACAACATCTTTTATTTCTTCTGGCTTCAATAACCATTGCATTTGGCTTTTTATCT\tA\t.\tPASS\tAC=163;AF=0.0431788;AFR_AF=0.0239;AMR_AF=0.0611;AN=3775;CS=DEL_pindel;EAS_AF=0.0497;END=106629030;EUR_AF=0.0522;NS=2504;SAS_AF=0.0404;SVTYPE=DEL\tGT\t1\nX\t106661474\tALU_umary_ALU_12744\tT\t<INS:ME:ALU>\t.\tPASS\tAC=1350;AF=0.357616;AFR_AF=0.3769;AMR_AF=0.4198;AN=3775;CS=ALU_umary;EAS_AF=0.4751;EUR_AF=0.1919;MEINFO=AluUndef,1,281,-;NS=2504;SAS_AF=0.337;SVLEN=280;SVTYPE=ALU;TSD=GCCCTGCAACACTGCTTTCT\tGT\t0\nX\t106663112\tYL_CN_CDX_3874\tT\t<CN0>\t100\tPASS\tAC=8;AF=0.00211921;AFR_AF=0.003;AMR_AF=0;AN=2542;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0.0013;END=106680635;EUR_AF=0.0052;NS=2504;SAS_AF=0;SVTYPE=DEL\tGT\t.\nX\t106744574\tDEL_pindel_54257\tTTGTCTCCTATTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCCGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCC\tT\t.\tPASS\tAC=1186;AF=0.314172;AFR_AF=0.3529;AMR_AF=0.2748;AN=3775;CS=DEL_pindel;EAS_AF=0.284;END=106744763;EUR_AF=0.3042;MEINFO=AluY,136,281,-;NS=2504;SAS_AF=0.3315;SVTYPE=DEL_ALU\tGT\t0\nX\t106746040\tDEL_pindel_54258\tGCACTGACGAAGCAGTGTTCTGGAAGGCCCCTATGGGGCCAGGCATTAACCCCTAAGCTGCCGGATCTGAAGCAGTGTTGGGGGTGTGCCAGGACAATTAGGGACACTCAGAGGGGTTTGAAGCAGCAGTTGTTTACCCATCACTAAGTAAGGAATGTAAGATTTGAACAAGTGGGATGGTGGTATAGGTGCTCATGGAGGGAATGTCAGCCCTCATCCTAGGGCAGATATAATTAGTCATGGGGGGAATGGGGGGGTTTCACAGGCACATAGCTAC\tG\t.\tPASS\tAC=611;AF=0.161854;AFR_AF=0.1246;AMR_AF=0.187;AN=3775;CS=DEL_pindel;EAS_AF=0.1702;END=106746316;EUR_AF=0.1749;NS=2504;SAS_AF=0.1727;SVTYPE=DEL\tGT\t1\nX\t106782128\tL1_umary_LINE1_3103\tA\t<INS:ME:LINE1>\t.\tPASS\tAC=1;AF=0.0002649;AFR_AF=0;AMR_AF=0.0019;AN=3775;CS=L1_umary;EAS_AF=0;EUR_AF=0;MEINFO=LINE1,5799,6019,-;NS=2504;SAS_AF=0;SVLEN=220;SVTYPE=LINE1;TSD=null\tGT\t0\nX\t106813487\tALU_umary_ALU_12745\tG\t<INS:ME:ALU>\t.\tPASS\tAC=327;AF=0.0866225;AFR_AF=0.2223;AMR_AF=0.0897;AN=3775;CS=ALU_umary;EAS_AF=0.0406;EUR_AF=0.0026;MEINFO=AluYb8,7,276,+;NS=2504;SAS_AF=0.0334;SVLEN=269;SVTYPE=ALU;TSD=GAAATGTTTACCAG\tGT\t0\nX\t106835955\tSVA_umary_SVA_843\tA\t<INS:ME:SVA>\t.\tPASS\tAC=60;AF=0.015894;AFR_AF=0.0548;AMR_AF=0.0095;AN=3775;CS=SVA_umary;EAS_AF=0;EUR_AF=0;MEINFO=SVA,697,1624,+;NS=2504;SAS_AF=0;SVLEN=927;SVTYPE=SVA;TSD=TA\tGT\t0\nX\t106923102\tDUP_gs.X_CNV_X_106923102_106947675\tA\t<CN0>,<CN2>\t.\tPASS\tAC=1,4;AF=0.0002649,0.0010596;AFR_AF=0.001,0;AMR_AF=0,0;AN=3775;CS=DUP_gs;EAS_AF=0,0;END=106947675;EUR_AF=0,0;NS=2504;SAS_AF=0,0.0056;SVTYPE=CNV\tGT\t0\nX\t106950594\tBI_GS_DEL1_B3_P3004_28\tA\t<CN0>\t100\tPASS\tAC=4;AF=0.00344371;AFR_AF=0.004;AMR_AF=0;AN=2542;CIEND=-41,42;CIPOS=-41,42;CS=DEL_union;EAS_AF=0.0026;END=106953072;EUR_AF=0.0078;NS=2504;SAS_AF=0.0014;SVTYPE=DEL\tGT\t.\nX\t106981593\tDEL_pindel_54262\tAGGTCTTGGCCCTGTGCCTGCTCCCCCAACCCTGCCCTCTGGGTGATCTTGCTCAAGGACGCCAAGGGAGTTGGTGGTAGAGGCTGGGAGCACAGCCCAGGTTTCCTGGATCCTGGCCTGGCACTCTTGCCACCAGACCCCGCTGCCGCTCCCTCTCCTCTCTTGCCCTTTGTGCCCAGTCTGCACCTCCTGGAGGCACATGCCCCACACCCCACTAGTTTTCATGGGCGAGATGTTTCTATTCAACACCAGTTGGCAGTTCAGCCATATGGGGCATAGGGAGTCTGGCCTTCTGCTGCCCATGGGGCCAGACCTAGGTAAAGGGAGGGGGAGAACAGGCTACTCTGCT\tA\t.\tPASS\tAC=380;AF=0.100662;AFR_AF=0.0598;AMR_AF=0.1298;AN=3775;CS=DEL_pindel;EAS_AF=0.1099;END=106981941;EUR_AF=0.094;NS=2504;SAS_AF=0.1337;SVTYPE=DEL\tGT\t0\nX\t107607940\tBI_GS_DEL1_B3_P3005_11\tA\t<CN0>\t100\tPASS\tAC=8;AF=0.00238411;AFR_AF=0.004;AMR_AF=0.0019;AN=2542;CIEND=-5,5;CIPOS=-5,5;CS=DEL_union;EAS_AF=0;END=107622940;EUR_AF=0.0052;MC=YL_CN_ESN_4476;NS=2504;SAS_AF=0;SVTYPE=DEL\tGT\t.\nX\t107627881\tBI_GS_DEL1_B4_P3005_109\tT\t<CN0>\t100\tPASS\tAC=216;AF=0.216424;AFR_AF=0.2183;AMR_AF=0.1756;AN=2542;CIEND=-22,23;CIPOS=-22,23;CS=DEL_union;EAS_AF=0.2277;END=107628640;EUR_AF=0.1867;NS=2504;SAS_AF=0.2632;SVTYPE=DEL\tGT\t.\nX\t107651526\tDUP_gs.X_CNV_X_107651526_107666981\tC\t<CN0>,<CN2>\t.\tPASS\tAC=3,1;AF=0.0007947,0.0002649;AFR_AF=0.003,0;AMR_AF=0,0;AN=3775;CS=DUP_gs;EAS_AF=0,0;END=107666981;EUR_AF=0,0;NS=2504;SAS_AF=0,0.0014;SVTYPE=CNV\tGT\t0\nX\t107659539\tDEL_pindel_54268\tAAAAAGCACCAGTTATAATTATTAGAGTAGAAAATAAACAATTTGTTACAGCACTCCTTGTAAACTCACCCCAATCATGTTCCCTGCTCC\tA\t.\tPASS\tAC=446;AF=0.118146;AFR_AF=0.1246;AMR_AF=0.1221;AN=3775;CS=DEL_pindel;EAS_AF=0.1243;END=107659628;EUR_AF=0.0979;NS=2504;SAS_AF=0.1212;SVTYPE=DEL\tGT\t0\nX\t107706519\tL1_umary_LINE1_3104\tA\t<INS:ME:LINE1>\t.\tPASS\tAC=1;AF=0.0002649;AFR_AF=0;AMR_AF=0;AN=3775;CS=L1_umary;EAS_AF=0.0013;EUR_AF=0;MEINFO=LINE1,4917,5204,-;NS=2504;SAS_AF=0;SVLEN=287;SVTYPE=LINE1;TSD=null\tGT\t0\nX\t107740379\tDEL_pindel_54269\tCTTAGCAGAATGTTTACAAGGTTCAGCCATGTTGTAACATGAATCAGTATTAGATTCATTTTCATCACTGAATCACATTACATTGTATGGATATACCACATTTTGGTTATCGGTTTATAAGTTGATGGACATTCAAGTTGTTTCCTCATTTGGCTATTAGAAATAATGCTGCTATGAATATTTGTGTAAAAGTTTTTGTATAGATATATGTTTTTTTAATCTTGGGTATATACCTAGAAGTAGATTTCCACGTGATGTGGTAACTCTATGTGTAAACATTTGGGGACCTAACATCCTGTTTTCTAAAGTGACTGCATCATTTTCTATTTTCACCAGAGAGCCTGGTGGGGTTCCTGGAGAAGGCTGTTAGAGAGTGTGAGTTCCTCTATGTTTGTGGGCCCCAGAAGTTTCACATTATCTTATTAGCCCACACCTGGCCTTTAGCAATTAGTTGAAATGTCTAATTGAATCTTCCTACCTGCTTGTATTCTGTATTGCATTCTATATTGTCATTCAATATTCAATTTTCTTAT\tC\t.\tPASS\tAC=743;AF=0.196821;AFR_AF=0.1834;AMR_AF=0.208;AN=3775;CS=DEL_pindel;EAS_AF=0.2147;END=107740911;EUR_AF=0.1867;NS=2504;SAS_AF=0.1992;SVTYPE=DEL\tGT\t1\nX\t107846189\tL1_umary_LINE1_3105\tT\t<INS:ME:LINE1>\t.\tPASS\tAC=1;AF=0.0002649;AFR_AF=0;AMR_AF=0.0019;AN=3775;CS=L1_umary;EAS_AF=0;EUR_AF=0;MEINFO=LINE1,4403,5878,+;NS=2504;SAS_AF=0;SVLEN=1475;SVTYPE=LINE1;TSD=null\tGT\t0\nX\t108032658\tDEL_pindel_54274\tGTCCTTCATTCTCTTGTTATGATGTATCACATTGATTGATTTGTATGTGTTGAACCA\tG\t.\tPASS\tAC=129;AF=0.0341722;AFR_AF=0.0189;AMR_AF=0.0687;AN=3775;CS=DEL_pindel;EAS_AF=0.0471;END=108032714;EUR_AF=0.0326;NS=2504;SAS_AF=0.0181;SVTYPE=DEL\tGT\t0\nX\t108057999\tBI_GS_DEL1_B3_P3006_2\tG\t<CN0>\t100\tPASS\tAC=98;AF=0.17298;AFR_AF=0.1695;AMR_AF=0.1985;AN=2542;CIEND=-36,36;CIPOS=-36,36;CS=DEL_union;EAS_AF=0.1139;END=108059415;EUR_AF=0.2115;NS=2504;SAS_AF=0.1811;SVTYPE=DEL\tGT\t.\nX\t108087559\tDEL_pindel_54277\tTTATGGGGAATATGTCAATGGTAGTTTGATGGGAATAGCATCGAATCTATAAATTACTTTGGGTAG\tT\t.\tPASS\tAC=18;AF=0.00476821;AFR_AF=0;AMR_AF=0.0191;AN=3775;CS=DEL_pindel;EAS_AF=0.0065;END=108087624;EUR_AF=0.0013;NS=2504;SAS_AF=0.0028;SVTYPE=DEL\tGT\t0\nX\t108131503\tDUP_gs.X_CNV_X_108131503_108152012\tT\t<CN0>,<CN2>\t.\tPASS\tAC=0,1;AF=0,0.0002649;AFR_AF=0,0;AMR_AF=0,0;AN=3775;CS=DUP_gs;EAS_AF=0,0;END=108152012;EUR_AF=0,0;NS=2504;SAS_AF=0,0.0014;SVTYPE=DUP\tGT\t0\nX\t108151864\tYL_CN_CHB_4709\tT\t<CN0>\t100\tPASS\tAC=4;AF=0.00423841;AFR_AF=0.007;AMR_AF=0.0019;AN=2542;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0.0052;END=108156184;EUR_AF=0.0052;NS=2504;SAS_AF=0;SVTYPE=DEL\tGT\t.\nX\t108263263\tEM_DL_DEL106532\tT\t<CN0>\t100\tPASS\tAC=7;AF=0.0018543;AFR_AF=0.003;AMR_AF=0;AN=2542;CIEND=-150,150;CIPOS=-150,150;CS=DEL_union;EAS_AF=0.0013;END=108274338;EUR_AF=0.0039;NS=2504;SAS_AF=0;SVTYPE=DEL\tGT\t.\nX\t108264721\tBI_GS_DEL1_B3_P3006_14\tG\t<CN0>\t100\tPASS\tAC=274;AF=0.302517;AFR_AF=0.3121;AMR_AF=0.3034;AN=2542;CIEND=-2,2;CIPOS=-2,2;CS=DEL_union;EAS_AF=0.3024;END=108265102;EUR_AF=0.2859;NS=2504;SAS_AF=0.3064;SVTYPE=DEL\tGT\t.\nX\t108338192\tALU_umary_ALU_12746\tC\t<INS:ME:ALU>\t.\tPASS\tAC=15;AF=0.00397351;AFR_AF=0.001;AMR_AF=0.0076;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0.0065;MEINFO=AluYa4_5,1,281,+;NS=2504;SAS_AF=0.007;SVLEN=280;SVTYPE=ALU;TSD=null\tGT\t0\nX\t108347263\tALU_umary_ALU_12747\tT\t<INS:ME:ALU>\t.\tPASS\tAC=1;AF=0.0002649;AFR_AF=0.001;AMR_AF=0;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0;MEINFO=AluUndef,3,281,-;NS=2504;SAS_AF=0;SVLEN=278;SVTYPE=ALU;TSD=null\tGT\t0\nX\t108353221\tBI_GS_DEL1_B3_P3006_17\tG\t<CN0>\t100\tPASS\tAC=175;AF=0.0701987;AFR_AF=0.1486;AMR_AF=0.0763;AN=2542;CIEND=-7,7;CIPOS=-7,7;CS=DEL_union;EAS_AF=0.0039;END=108357383;EUR_AF=0.0561;MC=UW_VH_2493,YL_CN_MXL_3779,YL_CN_PJL_5086;NS=2504;SAS_AF=0.0418;SVTYPE=DEL\tGT\t.\nX\t108573616\tUW_VH_9719\tC\t<CN0>\t100\tPASS\tAC=59;AF=0.0762914;AFR_AF=0.0957;AMR_AF=0.0859;AN=2542;CIEND=0,293;CIPOS=-359,0;CS=DEL_union;EAS_AF=0.0524;END=108575348;EUR_AF=0.0809;MC=BI_GS_DEL1_B2_P3006_293;NS=2504;SAS_AF=0.0627;SVTYPE=DEL\tGT\t.\nX\t108599123\tUW_VH_25288\tA\t<CN0>\t100\tPASS\tAC=8;AF=0.00211921;AFR_AF=0.002;AMR_AF=0;AN=2542;CIEND=0,135;CIPOS=-131,0;CS=DEL_union;EAS_AF=0;END=108610357;EUR_AF=0.0065;NS=2504;SAS_AF=0.0014;SVTYPE=DEL\tGT\t.\nX\t108896709\tUW_VH_8188\tA\t<CN0>\t100\tPASS\tAC=15;AF=0.00582781;AFR_AF=0.014;AMR_AF=0.0076;AN=2542;CIEND=0,159;CIPOS=-112,0;CS=DEL_union;EAS_AF=0;END=108902199;EUR_AF=0.0039;MC=BI_GS_DEL1_B2_P3006_478,YL_CN_PUR_5720;NS=2504;SAS_AF=0.0014;SVTYPE=DEL\tGT\t.\nX\t108970568\tSVA_umary_SVA_844\tC\t<INS:ME:SVA>\t.\tPASS\tAC=1;AF=0.0002649;AFR_AF=0;AMR_AF=0;AN=3775;CS=SVA_umary;EAS_AF=0;EUR_AF=0;MEINFO=SVA,50,1591,-;NS=2504;SAS_AF=0.0014;SVLEN=1541;SVTYPE=SVA;TSD=null\tGT\t0\nX\t109072643\tDEL_pindel_54286\tGACTCAGCCCGCCTGCACCCAGGTGAAATAAACAGCCATGTTGCTCACACAAAGCCTGTTTGGTGGTCTCTTCACACCGACGCGCATGAAAGTGGCACGTGCCTGTAGTCCCAGCC\tG\t.\tPASS\tAC=1015;AF=0.268874;AFR_AF=0.2582;AMR_AF=0.2653;AN=3775;CS=DEL_pindel;EAS_AF=0.2592;END=109072758;EUR_AF=0.2585;NS=2504;SAS_AF=0.3078;SVTYPE=DEL\tGT\t1\nX\t109080843\tDEL_pindel_54287\tTCTGTCTCAAAAAAAAAAAAAAAAAAAAAACACCGTGAAAGAATAGAAAGCCATG\tT\t.\tPASS\tAC=1179;AF=0.312318;AFR_AF=0.2941;AMR_AF=0.3073;AN=3775;CS=DEL_pindel;EAS_AF=0.3154;END=109080897;EUR_AF=0.2977;NS=2504;SAS_AF=0.3538;SVTYPE=DEL\tGT\t1\nX\t109098154\tBI_GS_DEL1_B3_P3007_6\tA\t<CN0>\t100\tPASS\tAC=6;AF=0.0018543;AFR_AF=0.003;AMR_AF=0;AN=2542;CIEND=-27,27;CIPOS=-27,27;CS=DEL_union;EAS_AF=0;END=109109836;EUR_AF=0.0052;MC=YL_CN_GWD_5918;NS=2504;SAS_AF=0;SVTYPE=DEL\tGT\t.\nX\t109398184\tBI_GS_DEL1_B2_P3007_189\tT\t<CN0>\t100\tPASS\tAC=6;AF=0.00211921;AFR_AF=0.003;AMR_AF=0.0019;AN=2542;CIEND=-17,18;CIPOS=-17,18;CS=DEL_union;EAS_AF=0;END=109401375;EUR_AF=0.0052;NS=2504;SAS_AF=0;SVTYPE=DEL\tGT\t.\nX\t109525724\tL1_umary_LINE1_3107\tA\t<INS:ME:LINE1>\t.\tPASS\tAC=8;AF=0.00211921;AFR_AF=0.008;AMR_AF=0;AN=3775;CS=L1_umary;EAS_AF=0;EUR_AF=0;MEINFO=LINE1,615,5999,+;NS=2504;SAS_AF=0;SVLEN=5384;SVTYPE=LINE1;TSD=null\tGT\t0\nX\t109591372\tALU_umary_ALU_12748\tA\t<INS:ME:ALU>\t.\tPASS\tAC=1;AF=0.0002649;AFR_AF=0.001;AMR_AF=0;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0;MEINFO=AluUndef,3,259,-;NS=2504;SAS_AF=0;SVLEN=256;SVTYPE=ALU;TSD=null\tGT\t0\nX\t109730872\tDEL_pindel_54290\tCTTGGTCGCTGTTGGTGTGTAGTAGAGCTACTGATTTGTGTACATTAACTTTGTATCCTGAAACTTTGCTGAATTCATTGACCAGCTCTAGGAGCTTTTTGGATGAGTCTTTAGGGTTTTCTAGGTATACAATCATGTCATCAGCAAACAGTGACAGT\tC\t.\tPASS\tAC=1107;AF=0.293245;AFR_AF=0.2851;AMR_AF=0.3053;AN=3775;CS=DEL_pindel;EAS_AF=0.2866;END=109731029;EUR_AF=0.2833;NS=2504;SAS_AF=0.3134;SVTYPE=DEL\tGT\t1\nX\t109835147\tALU_umary_ALU_12749\tT\t<INS:ME:ALU>\t.\tPASS\tAC=95;AF=0.0251656;AFR_AF=0.0917;AMR_AF=0.0057;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0;MEINFO=AluUndef,5,281,-;NS=2504;SAS_AF=0;SVLEN=276;SVTYPE=ALU;TSD=null\tGT\t0\nX\t109938579\tBI_GS_DEL1_B4_P3007_153\tA\t<CN0>\t100\tPASS\tAC=28;AF=0.0108609;AFR_AF=0.0279;AMR_AF=0.0038;AN=2542;CIEND=-2,3;CIPOS=-2,3;CS=DEL_union;EAS_AF=0.0013;END=109942134;EUR_AF=0.0117;MC=UW_VH_22982,UW_VH_9725,YL_CN_ACB_5125;NS=2504;SAS_AF=0.0014;SVTYPE=DEL\tGT\t.\nX\t109981884\tUW_VH_21825\tG\t<CN0>\t100\tPASS\tAC=5;AF=0.00715232;AFR_AF=0.007;AMR_AF=0.0115;AN=2542;CIEND=0,117;CIPOS=-146,0;CS=DEL_union;EAS_AF=0.0026;END=109984463;EUR_AF=0.0117;MC=BI_GS_DEL1_B4_P3007_158;NS=2504;SAS_AF=0.0042;SVTYPE=DEL\tGT\t.\nX\t110094457\tBI_GS_DEL1_B2_P3008_51\tA\t<CN0>\t100\tPASS\tAC=101;AF=0.136159;AFR_AF=0.1167;AMR_AF=0.1508;AN=2542;CIEND=-13,13;CIPOS=-13,13;CS=DEL_union;EAS_AF=0.1217;END=110095354;EUR_AF=0.1658;NS=2504;SAS_AF=0.1365;SVTYPE=DEL\tGT\t.\nX\t110125789\tALU_umary_ALU_12750\tG\t<INS:ME:ALU>\t.\tPASS\tAC=12;AF=0.00317881;AFR_AF=0.011;AMR_AF=0.0019;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0;MEINFO=AluYb9,3,276,+;NS=2504;SAS_AF=0;SVLEN=273;SVTYPE=ALU;TSD=AAAAGAGTAGAGTTTTTG\tGT\t0\nX\t110141273\tBI_GS_DEL1_B5_P3008_106\tG\t<CN0>\t100\tPASS\tAC=10;AF=0.00609272;AFR_AF=0.005;AMR_AF=0.0019;AN=2542;CIEND=-6,7;CIPOS=-6,7;CS=DEL_union;EAS_AF=0.0026;END=110145053;EUR_AF=0.0065;MC=YL_CN_ITU_4737;NS=2504;SAS_AF=0.0139;SVTYPE=DEL\tGT\t.\nX\t110414618\tDEL_pindel_54294\tCTTCAAAGTATACCCTTGAGAAGCTGCACCCTTATTCCCATGATTGTTCTATAACCCCAAG\tC\t.\tPASS\tAC=1160;AF=0.307285;AFR_AF=0.3071;AMR_AF=0.3015;AN=3775;CS=DEL_pindel;EAS_AF=0.3063;END=110414678;EUR_AF=0.2846;NS=2504;SAS_AF=0.337;SVTYPE=DEL\tGT\t1\nX\t110465342\tDEL_pindel_54298\tCAATTTGTGTTATAGAAGGCTTCTTAATTTGCAGTATAAAAGAATCTAAACAG\tC\t.\tPASS\tAC=73;AF=0.0193377;AFR_AF=0.0229;AMR_AF=0.021;AN=3775;CS=DEL_pindel;EAS_AF=0.0406;END=110465394;EUR_AF=0.0052;NS=2504;SAS_AF=0.0056;SVTYPE=DEL\tGT\t0\nX\t110595844\tDEL_pindel_54301\tAGGGCCAACTTCATCTATGGTTTCAGTACAACACTGCTGTACTCATTTCATTAGGGAACACCAAATAGGGTTTGGGCTGGCAATTACACTAGACCTGC\tA\t.\tPASS\tAC=34;AF=0.00900662;AFR_AF=0.011;AMR_AF=0.0095;AN=3775;CS=DEL_pindel;EAS_AF=0.0079;END=110595941;EUR_AF=0.0144;NS=2504;SAS_AF=0.0014;SVTYPE=DEL\tGT\t0\nX\t110807787\tUW_VH_13495\tT\t<CN0>\t100\tPASS\tAC=288;AF=0.279205;AFR_AF=0.2841;AMR_AF=0.2805;AN=2542;CIEND=0,264;CIPOS=-297,0;CS=DEL_union;EAS_AF=0.267;END=110808204;EUR_AF=0.2977;MC=BI_GS_DEL1_B3_P3008_30;NS=2504;SAS_AF=0.2646;SVTYPE=DEL\tGT\t.\nX\t111133753\tDEL_pindel_54306\tGTATCTGTGGAAGGTCCTGGAACCAATCCTCCTGTACACCAAGAGACAAACATTGTGTTCTTGC\tG\t.\tPASS\tAC=897;AF=0.237616;AFR_AF=0.2233;AMR_AF=0.2519;AN=3775;CS=DEL_pindel;EAS_AF=0.2565;END=111133816;EUR_AF=0.2311;NS=2504;SAS_AF=0.234;SVTYPE=DEL\tGT\t1\nX\t111133909\tDUP_gs.X_CNV_X_111133909_111148477\tC\t<CN0>,<CN2>\t.\tPASS\tAC=0,1;AF=0,0.0002649;AFR_AF=0,0;AMR_AF=0,0.0019;AN=3775;CS=DUP_gs;EAS_AF=0,0;END=111148477;EUR_AF=0,0;NS=2504;SAS_AF=0,0;SVTYPE=DUP\tGT\t0\nX\t111153256\tBI_GS_DEL1_B5_P3009_141\tT\t<CN0>\t100\tPASS\tAC=136;AF=0.181987;AFR_AF=0.1974;AMR_AF=0.2004;AN=2542;CIEND=-2,3;CIPOS=-2,3;CS=DEL_union;EAS_AF=0.1649;END=111153863;EUR_AF=0.1619;NS=2504;SAS_AF=0.1866;SVTYPE=DEL\tGT\t.\nX\t111187088\tUW_VH_13395\tC\t<CN0>\t100\tPASS\tAC=6;AF=0.00741722;AFR_AF=0.009;AMR_AF=0.0076;AN=2542;CIEND=0,235;CIPOS=-356,0;CS=DEL_union;EAS_AF=0.0118;END=111189328;EUR_AF=0.0065;MC=BI_GS_DEL1_B2_P3009_92,YL_CN_KHV_5064;NS=2504;SAS_AF=0.0014;SVTYPE=DEL\tGT\t.\nX\t111229571\tL1_umary_LINE1_3108\tT\t<INS:ME:LINE1>\t.\tPASS\tAC=131;AF=0.034702;AFR_AF=0.014;AMR_AF=0.0401;AN=3775;CS=L1_umary;EAS_AF=0.0039;EUR_AF=0.111;MEINFO=LINE1,15,6009,-;NS=2504;SAS_AF=0.0111;SVLEN=5994;SVTYPE=LINE1;TSD=ATCCCAAATTCTT\tGT\t0\nX\t111276718\tALU_umary_ALU_12751\tT\t<INS:ME:ALU>\t.\tPASS\tAC=186;AF=0.0492715;AFR_AF=0.1167;AMR_AF=0.0324;AN=3775;CS=ALU_umary;EAS_AF=0.0013;EUR_AF=0.0444;MEINFO=AluYb8,1,279,-;NS=2504;SAS_AF=0.0237;SVLEN=278;SVTYPE=ALU;TSD=TGTCTTTTT\tGT\t0\nX\t111316672\tSVA_umary_SVA_845\tA\t<INS:ME:SVA>\t.\tPASS\tAC=21;AF=0.00556291;AFR_AF=0.001;AMR_AF=0.0038;AN=3775;CS=SVA_umary;EAS_AF=0;EUR_AF=0.0196;MEINFO=SVA,40,1627,+;NS=2504;SAS_AF=0.0042;SVLEN=1587;SVTYPE=SVA;TSD=null\tGT\t0\nX\t111420997\tALU_umary_ALU_12752\tC\t<INS:ME:ALU>\t.\tPASS\tAC=2;AF=0.0005298;AFR_AF=0;AMR_AF=0;AN=3775;CS=ALU_umary;EAS_AF=0.0026;EUR_AF=0;MEINFO=AluUndef,1,281,-;NS=2504;SAS_AF=0;SVLEN=280;SVTYPE=ALU;TSD=null\tGT\t0\nX\t111439435\tYL_CN_JPT_4759\tT\t<CN0>\t100\tPASS\tAC=9;AF=0.00264901;AFR_AF=0.003;AMR_AF=0.0019;AN=2542;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0.0013;END=111578797;EUR_AF=0.0065;NS=2504;SAS_AF=0;SVTYPE=DEL\tGT\t.\nX\t111530247\tBI_GS_DEL1_B3_P3009_19\tT\t<CN0>\t100\tPASS\tAC=15;AF=0.058543;AFR_AF=0.0628;AMR_AF=0.0496;AN=2542;CIEND=-22,23;CIPOS=-22,23;CS=DEL_union;EAS_AF=0.0484;END=111531377;EUR_AF=0.0653;NS=2504;SAS_AF=0.0627;SVTYPE=DEL\tGT\t.\nX\t111557758\tL1_umary_LINE1_3109\tT\t<INS:ME:LINE1>\t.\tPASS\tAC=599;AF=0.158676;AFR_AF=0.2094;AMR_AF=0.2958;AN=3775;CS=L1_umary;EAS_AF=0.0524;EUR_AF=0.1867;MEINFO=LINE1,5,6018,-;NS=2504;SAS_AF=0.071;SVLEN=6013;SVTYPE=LINE1;TSD=AGGACTTTT\tGT\t0\nX\t111619957\tBI_GS_DEL1_B5_P3009_551\tA\t<CN0>\t100\tPASS\tAC=42;AF=0.095894;AFR_AF=0.0828;AMR_AF=0.105;AN=2542;CIEND=-2,3;CIPOS=-2,3;CS=DEL_union;EAS_AF=0.0707;END=111621780;EUR_AF=0.1384;MC=UW_VH_21637;NS=2504;SAS_AF=0.0891;SVTYPE=DEL\tGT\t.\nX\t111667087\tDUP_gs.X_CNV_X_111667087_111936181\tC\t<CN0>,<CN2>\t.\tPASS\tAC=0,3;AF=0,0.0007947;AFR_AF=0,0.002;AMR_AF=0,0;AN=3775;CS=DUP_gs;EAS_AF=0,0;END=111936181;EUR_AF=0,0.0013;NS=2504;SAS_AF=0,0;SVTYPE=DUP\tGT\t0\nX\t111711651\tDUP_gs.X_CNV_X_111711651_111745323\tA\t<CN0>,<CN2>\t.\tPASS\tAC=6,1;AF=0.0015894,0.0002649;AFR_AF=0,0;AMR_AF=0.0038,0;AN=3775;CS=DUP_gs;EAS_AF=0,0;END=111745323;EUR_AF=0.0052,0.0013;NS=2504;SAS_AF=0,0;SVTYPE=CNV\tGT\t0\nX\t111818173\tDUP_gs.X_CNV_X_111818173_111840496\tT\t<CN0>,<CN2>\t.\tPASS\tAC=0,2;AF=0,0.0005298;AFR_AF=0,0;AMR_AF=0,0.0019;AN=3775;CS=DUP_gs;EAS_AF=0,0;END=111840496;EUR_AF=0,0.0013;NS=2504;SAS_AF=0,0;SVTYPE=DUP\tGT\t0\nX\t111912510\tDEL_pindel_54308\tATAGCGTGTTTAAAAATAAAAGTGAAAGGTAAGCCTAAGACCTATTTGTAATACCCATGGAGCTTCCAAAGCCAGCTAAGATAATTGGCTTAGATCAGCCTTAGCAACTGGTTTAGTATTACAGTTTTCAAAGGGAAGAAACTAACTTAATTGTACATTCCAATG\tA\t.\tPASS\tAC=161;AF=0.042649;AFR_AF=0.0359;AMR_AF=0.0725;AN=3775;CS=DEL_pindel;EAS_AF=0.0393;END=111912674;EUR_AF=0.0431;NS=2504;SAS_AF=0.0334;SVTYPE=DEL\tGT\t1\nX\t111994369\tUW_VH_12699\tA\t<CN0>\t100\tPASS\tAC=91;AF=0.0357616;AFR_AF=0.1147;AMR_AF=0.0134;AN=2542;CIEND=0,106;CIPOS=-128,0;CS=DEL_union;EAS_AF=0.0026;END=111997226;EUR_AF=0.0091;MC=BI_GS_DEL1_B5_P3009_865,EM_DL_DEL106582,YL_CN_GWD_5919,YL_CN_PUR_5723;NS=2504;SAS_AF=0.0056;SVTYPE=DEL\tGT\t.\nX\t112008322\tDEL_pindel_54314\tAGCTGGTTAACACCATCACAGCAATAGTAGCTGTTGACAGCTGAACTGCTTTCCGATTG\tA\t.\tPASS\tAC=1024;AF=0.271258;AFR_AF=0.2592;AMR_AF=0.2634;AN=3775;CS=DEL_pindel;EAS_AF=0.2827;END=112008380;EUR_AF=0.2507;NS=2504;SAS_AF=0.3036;SVTYPE=DEL\tGT\t1\nX\t112032217\tL1_umary_LINE1_3110\tT\t<INS:ME:LINE1>\t.\tPASS\tAC=1;AF=0.0002649;AFR_AF=0.001;AMR_AF=0;AN=3775;CS=L1_umary;EAS_AF=0;EUR_AF=0;MEINFO=LINE1,2198,5923,-;NS=2504;SAS_AF=0;SVLEN=3725;SVTYPE=LINE1;TSD=GGGTAGTTTCTTTAT\tGT\t0\nX\t112052858\tDEL_pindel_54317\tACTAGCAGGGATTTCAAGGGGCTTCTCTAGTTTAATGCTGAAGGACCAATGTGATGTGACGAGATGTTGTGGCAAGCAGCCTTCTTGGCTTAGGAGGAAAAGAACAGAATCTTCCAACTTCATGCCTGAATAGGAAAAACAATCCTTAGGTGATATTGACTCTGCCCTGGCTGTT\tA\t.\tPASS\tAC=1153;AF=0.30543;AFR_AF=0.2971;AMR_AF=0.2939;AN=3775;CS=DEL_pindel;EAS_AF=0.3024;END=112053032;EUR_AF=0.3016;NS=2504;SAS_AF=0.3329;SVTYPE=DEL\tGT\t1\nX\t112149816\tBI_GS_DEL1_B3_P3010_6\tT\t<CN0>\t100\tPASS\tAC=11;AF=0.00582781;AFR_AF=0.01;AMR_AF=0.0019;AN=2542;CIEND=-10,10;CIPOS=-10,10;CS=DEL_union;EAS_AF=0.0065;END=112152434;EUR_AF=0.0078;NS=2504;SAS_AF=0;SVTYPE=DEL\tGT\t.\nX\t112161029\tDUP_gs.X_CNV_X_112161029_112168547\tT\t<CN0>,<CN2>\t.\tPASS\tAC=7,1;AF=0.0018543,0.0002649;AFR_AF=0,0;AMR_AF=0,0;AN=3775;CS=DUP_gs;EAS_AF=0.0079,0;END=112168547;EUR_AF=0,0.0013;NS=2504;SAS_AF=0.0014,0;SVTYPE=CNV\tGT\t0\nX\t112169917\tALU_umary_ALU_12753\tC\t<INS:ME:ALU>\t.\tPASS\tAC=5;AF=0.0013245;AFR_AF=0;AMR_AF=0.0038;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0.0039;MEINFO=AluUndef,82,281,+;NS=2504;SAS_AF=0;SVLEN=199;SVTYPE=ALU;TSD=null\tGT\t0\nX\t112351072\tL1_umary_LINE1_3111\tA\t<INS:ME:LINE1>\t.\tPASS\tAC=1;AF=0.0002649;AFR_AF=0.001;AMR_AF=0;AN=3775;CS=L1_umary;EAS_AF=0;EUR_AF=0;MEINFO=LINE1,1,5910,+;NS=2504;SAS_AF=0;SVLEN=5909;SVTYPE=LINE1;TSD=null\tGT\t0\nX\t112435261\tALU_umary_ALU_12754\tC\t<INS:ME:ALU>\t.\tPASS\tAC=2;AF=0.0005298;AFR_AF=0;AMR_AF=0;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0.0026;MEINFO=AluYa3_1,1,281,+;NS=2504;SAS_AF=0;SVLEN=280;SVTYPE=ALU;TSD=null\tGT\t0\nX\t112435952\tBI_GS_DEL1_B2_P3010_215\tA\t<CN0>\t100\tPASS\tAC=6;AF=0.00211921;AFR_AF=0.005;AMR_AF=0;AN=2542;CIEND=-46,47;CIPOS=-46,47;CS=DEL_union;EAS_AF=0;END=112440586;EUR_AF=0.0039;NS=2504;SAS_AF=0;SVTYPE=DEL\tGT\t.\nX\t112436185\tDUP_gs.X_CNV_X_112436185_112440675\tT\t<CN0>,<CN2>\t.\tPASS\tAC=2,1;AF=0.0005298,0.0002649;AFR_AF=0.002,0;AMR_AF=0,0;AN=3775;CS=DUP_gs;EAS_AF=0,0;END=112440675;EUR_AF=0,0.0013;NS=2504;SAS_AF=0,0;SVTYPE=CNV\tGT\t0\nX\t112443765\tUW_VH_3173\tG\t<CN0>\t100\tPASS\tAC=66;AF=0.129536;AFR_AF=0.1316;AMR_AF=0.1298;AN=2542;CIEND=0,354;CIPOS=-310,0;CS=DEL_union;EAS_AF=0.1191;END=112444514;EUR_AF=0.1462;MC=BI_GS_DEL1_B4_P3010_62;NS=2504;SAS_AF=0.1198;SVTYPE=DEL\tGT\t.\nX\t112522502\tBI_GS_DEL1_B5_P3010_440\tG\t<CN0>\t100\tPASS\tAC=8;AF=0.00211921;AFR_AF=0.002;AMR_AF=0.0019;AN=2542;CIEND=-22,22;CIPOS=-22,22;CS=DEL_union;EAS_AF=0;END=112529227;EUR_AF=0.0065;MC=YL_CN_TSI_4446;NS=2504;SAS_AF=0;SVTYPE=DEL\tGT\t.\nX\t112597965\tDEL_pindel_54321\tGACTACACATGGATTCCTGAGGACTACTAAAATTTAAGGGCATGGTGGAAGAGAAAATGTTATTATCATATTCTAAGAAGAAAAGAAATATATGATTCCTTCTTATTTCTCCTGATCTGCTGAAGTACGGGTGTTTCAGTGAGAGATAGTCTGGTTAGTGACCAGATAGTCCCTACATTTAGACAAAATTTAGCTATTTCTAGTACACACAATCTTCAATTAAGGCTTTTAATAGAAATTTCAAACTAAAAGAGAATTGAGCTTAATTTGAGCAAGCCATGGA\tG\t.\tPASS\tAC=1127;AF=0.298543;AFR_AF=0.2822;AMR_AF=0.292;AN=3775;CS=DEL_pindel;EAS_AF=0.2971;END=112598247;EUR_AF=0.3003;NS=2504;SAS_AF=0.3259;SVTYPE=DEL\tGT\t1\nX\t112788553\tDEL_pindel_54328\tGTGCAGATGAGCAAGGAAATGAGACTTGAAACTGGAAAGTAGGTGGAGTGTATCAGGACTACTTCTTAGCCAAATAGCTAAATAGATAAGTTTGTGTTCCAGTCTTTCCGTCATCATTTCATCAGCCCT\tG\t.\tPASS\tAC=1930;AF=0.511258;AFR_AF=0.341;AMR_AF=0.4676;AN=3775;CS=DEL_pindel;EAS_AF=0.5419;END=112788681;EUR_AF=0.6332;NS=2504;SAS_AF=0.6184;SVTYPE=DEL\tGT\t1\nX\t112877015\tDEL_pindel_54331\tTAAAAGTAAACTTCAGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAGAAAAAAAAAAAAAAAAAAA\tT\t.\tPASS\tAC=2456;AF=0.650596;AFR_AF=0.6421;AMR_AF=0.687;AN=3775;CS=DEL_pindel;EAS_AF=0.6387;END=112877346;EUR_AF=0.6684;MEINFO=AluYa5,1,281,+;NS=2504;SAS_AF=0.6295;SVTYPE=DEL_ALU\tGT\t0\nX\t112892922\tYL_CN_CHS_4772\tA\t<CN0>\t100\tPASS\tAC=8;AF=0.00238411;AFR_AF=0.003;AMR_AF=0.0019;AN=2542;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0.0013;END=113007167;EUR_AF=0.0052;NS=2504;SAS_AF=0;SVTYPE=DEL\tGT\t.\nX\t113148602\tDEL_pindel_54332\tATTAATGCCCTCCCTGAAGGGAAGGAGGATGCTGAGTGAGTTCTCACTCTATTTGTTCTGACAAGATCTGATTGTTAAAAAGAGCCTGGCATTTCTTCACTTTTT\tA\t.\tPASS\tAC=1195;AF=0.316556;AFR_AF=0.318;AMR_AF=0.3092;AN=3775;CS=DEL_pindel;EAS_AF=0.2984;END=113148706;EUR_AF=0.3003;NS=2504;SAS_AF=0.3565;SVTYPE=DEL\tGT\t1\nX\t113149721\tYL_CN_ASW_4600\tA\t<CN0>\t100\tPASS\tAC=8;AF=0.00211921;AFR_AF=0.003;AMR_AF=0.0019;AN=2542;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0;END=113163457;EUR_AF=0.0052;NS=2504;SAS_AF=0;SVTYPE=DEL\tGT\t.\nX\t113227860\tUW_VH_12726\tA\t<CN0>\t100\tPASS\tAC=19;AF=0.00741722;AFR_AF=0.0169;AMR_AF=0.0019;AN=2542;CIEND=0,279;CIPOS=-265,0;CS=DEL_union;EAS_AF=0.0026;END=113232251;EUR_AF=0.0091;MC=YL_CN_MSL_4081,EM_DL_DEL106599,BI_GS_DEL1_B5_P3011_204;NS=2504;SAS_AF=0.0014;SVTYPE=DEL\tGT\t.\nX\t113231092\tALU_umary_ALU_12755\tC\t<INS:ME:ALU>\t.\tPASS\tAC=3;AF=0.0007947;AFR_AF=0.003;AMR_AF=0;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0;MEINFO=AluUndef,1,279,+;NS=2504;SAS_AF=0;SVLEN=278;SVTYPE=ALU;TSD=null\tGT\t0\nX\t113253298\tDEL_pindel_54337\tCGAGATTGTGCCACTGCACTCCAGCCTGGGTCACAGAGCCAGACTGTCTCAAAAAAAAAAAAAAAAAAAAAGGAAAAAA\tC\t.\tPASS\tAC=1126;AF=0.298278;AFR_AF=0.2792;AMR_AF=0.2958;AN=3775;CS=DEL_pindel;EAS_AF=0.2958;END=113253376;EUR_AF=0.3029;NS=2504;SAS_AF=0.3245;SVTYPE=DEL\tGT\t1\nX\t113296407\tDEL_pindel_54338\tCAGACTTTACGTAAGGTAGTTGTGACTCTACCTAAATGTCTTATGAAAATAGGTATTGTATCTAACTGGGGGATGTTTCCCCTATCTAGTACTATAAAATTGAAAGCATGTAAATCTGCTCTTTGAGAAATATGAATCGGACATGCTAAATGGGAACTAGTAAGATTACCTGAGCCCACAATCTGTAGGGTAAAAGCTGGAGTGCCAGTCAGGACAAATCCTCTCCTTCATAGCCTTTTGTGGAGCATTAATTGGGGCTTATGGCAAAAGACTGTGAGTACTTCCCAACAACAATGACTGGACTAGAGAATTTCCACTTGAGGGGCATTTACTGCCTTGCTATGGAATGTTAACTGAAGCTACTCCTATGCTGATGGAAGTAATGCTGTGCAAAGAGTTTCATGATAAAATGAAAATAGCTTACATAGGATCTTGGTACCTGAGTGTATTAGTCCATTTTCACACTGCTGATAAAGACATGCCCAAAACTGGACAAAAG\tC\t.\tPASS\tAC=468;AF=0.123974;AFR_AF=0.0917;AMR_AF=0.1431;AN=3775;CS=DEL_pindel;EAS_AF=0.1636;END=113296905;EUR_AF=0.1136;NS=2504;SAS_AF=0.124;SVTYPE=DEL\tGT\t1\nX\t113318427\tDUP_gs.X_CNV_X_113318427_113417625\tT\t<CN0>,<CN2>\t.\tPASS\tAC=1,2;AF=0.0002649,0.0005298;AFR_AF=0,0;AMR_AF=0.0019,0.0019;AN=3775;CS=DUP_gs;EAS_AF=0,0;END=113417625;EUR_AF=0,0.0013;NS=2504;SAS_AF=0,0;SVTYPE=CNV\tGT\t0\nX\t113319208\tBI_GS_DEL1_B2_P3011_141\tG\t<CN0>\t100\tPASS\tAC=48;AF=0.0166887;AFR_AF=0.0578;AMR_AF=0.0019;AN=2542;CIEND=0,1;CIPOS=0,1;CS=DEL_union;EAS_AF=0;END=113323151;EUR_AF=0.0052;MC=YL_CN_GWD_5921,YL_CN_ESN_4480,UW_VH_12170;NS=2504;SAS_AF=0;SVTYPE=DEL\tGT\t.\nX\t113348190\tDUP_gs.X_CNV_X_113348190_113355238\tA\t<CN0>,<CN2>\t.\tPASS\tAC=11,5;AF=0.00291391,0.0013245;AFR_AF=0,0.004;AMR_AF=0.0019,0;AN=3775;CS=DUP_gs;EAS_AF=0.0013,0;END=113355238;EUR_AF=0.0078,0.0013;NS=2504;SAS_AF=0.0042,0;SVTYPE=CNV\tGT\t0\nX\t113348331\tBI_GS_DEL1_B1_P3011_182\tA\t<CN0>\t100\tPASS\tAC=13;AF=0.00503311;AFR_AF=0.002;AMR_AF=0.0019;AN=2542;CIEND=-2,2;CIPOS=-2,2;CS=DEL_union;EAS_AF=0;END=113355364;EUR_AF=0.017;MC=UW_VH_3490,YL_CN_IBS_4130;NS=2504;SAS_AF=0.0042;SVTYPE=DEL\tGT\t.\nX\t113412632\tBI_GS_DEL1_B4_P3011_53\tG\t<CN0>\t100\tPASS\tAC=7;AF=0.00423841;AFR_AF=0.004;AMR_AF=0.0038;AN=2542;CIEND=-29,29;CIPOS=-29,29;CS=DEL_union;EAS_AF=0.0013;END=113416467;EUR_AF=0.0078;NS=2504;SAS_AF=0.0042;SVTYPE=DEL\tGT\t.\nX\t113740508\tALU_umary_ALU_12756\tG\t<INS:ME:ALU>\t.\tPASS\tAC=28;AF=0.00741722;AFR_AF=0.0249;AMR_AF=0.0057;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0;MEINFO=AluUndef,1,281,+;NS=2504;SAS_AF=0;SVLEN=280;SVTYPE=ALU;TSD=AAAAAGTAGATATCTG\tGT\t0\nX\t113775634\tDEL_pindel_54348\tTCATTTGTCTCATAAGTGTCTAGTATCCAGAATATATGGATAATTATTTCAATTCAACAATTAAAAGACAAGTAATCAAATTTAAAAAGGGCCAAGAAACTTAATAGACATTTATCCAAAGGTCATATAAGGTCATCCAAAGGCTAATAAGCACATGAAAAGATGCTCATTATTATTAATTAGGGTAATGCAAACCAAAACCACAATGAGATACCCTTCCCGCATACCAAGATAGCGATAATTTTTAAAAACAAAAAATAACGAGTATTGGAGAGAACGTGGAAAAATTAAAAAGTTAATATGCCGCTAACGAGAAGTGGAAGATGCTTCCACTTTAGAAAACAGTCTGGCCATTCTTCAAAAGATTAAACAAAGTTATGACATATCCCAACAATTCCACTCCTAGGTATATACCCAAGGGAAATGAAAA\tT\t.\tPASS\tAC=300;AF=0.0794702;AFR_AF=0.0399;AMR_AF=0.0897;AN=3775;CS=DEL_pindel;EAS_AF=0.127;END=113776063;EUR_AF=0.077;NS=2504;SAS_AF=0.0794;SVTYPE=DEL\tGT\t1\nX\t113879043\tL1_umary_LINE1_3112\tT\t<INS:ME:LINE1>\t.\tPASS\tAC=27;AF=0.00715232;AFR_AF=0.0229;AMR_AF=0.0076;AN=3775;CS=L1_umary;EAS_AF=0;EUR_AF=0;MEINFO=LINE1,1,419,-;NS=2504;SAS_AF=0;SVLEN=418;SVTYPE=LINE1;TSD=null\tGT\t0\nX\t113997499\tDEL_pindel_54350\tAAGTACTTCTAGAAGTCACCAGTGGTTCTCTCGTGTGATCATGAGCAAATCAATTTTCATCATGC\tA\t.\tPASS\tAC=856;AF=0.226755;AFR_AF=0.2114;AMR_AF=0.2347;AN=3775;CS=DEL_pindel;EAS_AF=0.2251;END=113997563;EUR_AF=0.2311;NS=2504;SAS_AF=0.2396;SVTYPE=DEL\tGT\t1\nX\t114005906\tALU_umary_ALU_12757\tT\t<INS:ME:ALU>\t.\tPASS\tAC=5;AF=0.0013245;AFR_AF=0.005;AMR_AF=0;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0;MEINFO=AluYa3_1,16,281,-;NS=2504;SAS_AF=0;SVLEN=265;SVTYPE=ALU;TSD=null\tGT\t0\nX\t114032058\tALU_umary_ALU_12758\tT\t<INS:ME:ALU>\t.\tPASS\tAC=33;AF=0.00874172;AFR_AF=0.0329;AMR_AF=0;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0;MEINFO=AluUndef,10,278,-;NS=2504;SAS_AF=0;SVLEN=268;SVTYPE=ALU;TSD=CTGTGTCTTGAATTT\tGT\t0\nX\t114052726\tUW_VH_17579\tA\t<CN0>\t100\tPASS\tAC=5;AF=0.00503311;AFR_AF=0.007;AMR_AF=0.0038;AN=2542;CIEND=0,232;CIPOS=-219,0;CS=DEL_union;EAS_AF=0.0026;END=114056652;EUR_AF=0.0091;MC=YL_CN_ESN_4481,BI_GS_DEL1_B5_P3012_29;NS=2504;SAS_AF=0.0014;SVTYPE=DEL\tGT\t.\nX\t114056288\tALU_umary_ALU_12759\tT\t<INS:ME:ALU>\t.\tPASS\tAC=3;AF=0.0007947;AFR_AF=0.002;AMR_AF=0.0019;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0;MEINFO=AluUndef,1,281,-;NS=2504;SAS_AF=0;SVLEN=280;SVTYPE=ALU;TSD=null\tGT\t0\nX\t114059856\tDUP_gs.X_CNV_X_114059856_114424105\tC\t<CN0>,<CN2>\t.\tPASS\tAC=0,1;AF=0,0.0002649;AFR_AF=0,0;AMR_AF=0,0.0019;AN=3775;CS=DUP_gs;EAS_AF=0,0;END=114424105;EUR_AF=0,0;NS=2504;SAS_AF=0,0;SVTYPE=DUP\tGT\t0\nX\t114214889\tALU_umary_ALU_12760\tC\t<INS:ME:ALU>\t.\tPASS\tAC=10;AF=0.00264901;AFR_AF=0.004;AMR_AF=0.0019;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0.0065;MEINFO=AluUndef,1,277,+;NS=2504;SAS_AF=0;SVLEN=276;SVTYPE=ALU;TSD=null\tGT\t0\nX\t114249813\tALU_umary_ALU_12761\tA\t<INS:ME:ALU>\t.\tPASS\tAC=4;AF=0.0010596;AFR_AF=0;AMR_AF=0;AN=3775;CS=ALU_umary;EAS_AF=0.0052;EUR_AF=0;MEINFO=AluUndef,1,280,-;NS=2504;SAS_AF=0;SVLEN=279;SVTYPE=ALU;TSD=null\tGT\t0\nX\t114286632\tUW_VH_20336\tG\t<CN0>\t100\tPASS\tAC=7;AF=0.010596;AFR_AF=0.012;AMR_AF=0.0038;AN=2542;CIEND=0,146;CIPOS=-128,0;CS=DEL_union;EAS_AF=0.0092;END=114288986;EUR_AF=0.0183;MC=BI_GS_DEL1_B4_P3012_35;NS=2504;SAS_AF=0.007;SVTYPE=DEL\tGT\t.\nX\t114505815\tDEL_pindel_54353\tTTTTTTTTCCTCAATTTCCAATGAAAGGAATTCAAATATTTCACAGTTAGGCATTTTAATC\tT\t.\tPASS\tAC=872;AF=0.230993;AFR_AF=0.2263;AMR_AF=0.2099;AN=3775;CS=DEL_pindel;EAS_AF=0.2435;END=114505875;EUR_AF=0.2232;NS=2504;SAS_AF=0.2479;SVTYPE=DEL\tGT\t0\nX\t114542484\tUW_VH_1938\tT\t<CN0>\t100\tPASS\tAC=243;AF=0.112053;AFR_AF=0.0269;AMR_AF=0.1317;AN=2542;CIEND=0,287;CIPOS=-407,0;CS=DEL_union;EAS_AF=0.0275;END=114544509;EUR_AF=0.2742;MC=BI_GS_DEL1_B1_P3012_309,UW_VH_4991,YL_CN_CLM_3905,YL_CN_ITU_4738;NS=2504;SAS_AF=0.1337;SVTYPE=DEL\tGT\t.\nX\t114565895\tDEL_pindel_54356\tGCTCACTGCAACCTCCACCTCCCGGGTTCAAGCGATTCTTGTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCTCGTGCCACAGCACGAGGCTAATTTTTGCATTTTTAGTAGAGACGAGGTTTCACCATGCTGGCCAGGCTGGTCTTGAACTCCTGAC\tG\t.\tPASS\tAC=925;AF=0.245033;AFR_AF=0.2203;AMR_AF=0.2328;AN=3775;CS=DEL_pindel;EAS_AF=0.2709;END=114566055;EUR_AF=0.2285;NS=2504;SAS_AF=0.2786;SVTYPE=DEL\tGT\t1\nX\t114670492\tDEL_pindel_54360\tTAAAACTGTGCCTGGTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCTCGTCTCTACTAAAAAATACAAAAAATTATCCGGGCGTAGTGGCGAGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAA\tT\t.\tPASS\tAC=1555;AF=0.411921;AFR_AF=0.4277;AMR_AF=0.4466;AN=3775;CS=DEL_pindel;EAS_AF=0.3298;END=114670787;EUR_AF=0.4608;MEINFO=AluY,15,281,+;NS=2504;SAS_AF=0.3997;SVTYPE=DEL_ALU\tGT\t1\nX\t114709122\tALU_umary_ALU_12762\tG\t<INS:ME:ALU>\t.\tPASS\tAC=22;AF=0.00582781;AFR_AF=0.0209;AMR_AF=0.0019;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0;MEINFO=AluYb8,1,280,-;NS=2504;SAS_AF=0;SVLEN=279;SVTYPE=ALU;TSD=null\tGT\t0\nX\t114716645\tDUP_gs.X_CNV_X_114716645_114727976\tT\t<CN0>,<CN2>\t.\tPASS\tAC=0,1;AF=0,0.0002649;AFR_AF=0,0.001;AMR_AF=0,0;AN=3775;CS=DUP_gs;EAS_AF=0,0;END=114727976;EUR_AF=0,0;NS=2504;SAS_AF=0,0;SVTYPE=DUP\tGT\t0\nX\t114777311\tL1_umary_LINE1_3113\tT\t<INS:ME:LINE1>\t.\tPASS\tAC=51;AF=0.0135099;AFR_AF=0.0439;AMR_AF=0.0057;AN=3775;CS=L1_umary;EAS_AF=0;EUR_AF=0;MEINFO=LINE1,1,5927,+;NS=2504;SAS_AF=0.0056;SVLEN=5926;SVTYPE=LINE1;TSD=AAGAAAAACCTGTT\tGT\t0\nX\t114828525\tUW_VH_8407\tG\t<CN0>\t100\tPASS\tAC=86;AF=0.152053;AFR_AF=0.1306;AMR_AF=0.1279;AN=2542;CIEND=0,172;CIPOS=-274,0;CS=DEL_union;EAS_AF=0.1688;END=114829308;EUR_AF=0.1684;MC=BI_GS_DEL1_B2_P3012_373;NS=2504;SAS_AF=0.1643;SVTYPE=DEL\tGT\t.\nX\t114871817\tALU_umary_ALU_12763\tT\t<INS:ME:ALU>\t.\tPASS\tAC=1;AF=0.0002649;AFR_AF=0;AMR_AF=0;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0.0013;MEINFO=AluUndef,11,271,+;NS=2504;SAS_AF=0;SVLEN=260;SVTYPE=ALU;TSD=null\tGT\t0\nX\t114914154\tYL_CN_CHB_4712\tT\t<CN0>\t100\tPASS\tAC=15;AF=0.024106;AFR_AF=0.0319;AMR_AF=0.0191;AN=2542;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0.0275;END=114918367;EUR_AF=0.0339;NS=2504;SAS_AF=0.0028;SVTYPE=DEL\tGT\t.\nX\t114923940\tEM_DL_DEL106750\tA\t<CN0>\t100\tPASS\tAC=7;AF=0.00900662;AFR_AF=0.009;AMR_AF=0;AN=2542;CIEND=-150,150;CIPOS=-150,150;CS=DEL_union;EAS_AF=0.0157;END=114926524;EUR_AF=0.0157;NS=2504;SAS_AF=0.0014;SVTYPE=DEL\tGT\t.\nX\t115137999\tUW_VH_18580\tC\t<CN0>\t100\tPASS\tAC=679;AF=0.269139;AFR_AF=0.2911;AMR_AF=0.2214;AN=2542;CIEND=0,365;CIPOS=-377,0;CS=DEL_union;EAS_AF=0.0916;END=115152939;EUR_AF=0.4086;MC=YL_CN_ASW_4603,UW_VH_3885,BI_GS_DEL1_B1_P3013_95,UW_VH_2185,UW_VH_3799,EM_DL_DEL106760;NS=2504;SAS_AF=0.3134;SVTYPE=DEL\tGT\t.\nX\t115182224\tBI_GS_DEL1_B4_P3013_28\tG\t<CN0>\t100\tPASS\tAC=400;AF=0.338543;AFR_AF=0.327;AMR_AF=0.3359;AN=2542;CIEND=-6,6;CIPOS=-6,6;CS=DEL_union;EAS_AF=0.3246;END=115183321;EUR_AF=0.3773;NS=2504;SAS_AF=0.3301;SVTYPE=DEL\tGT\t.\nX\t115208182\tDEL_pindel_54363\tAATGATTCAACAAGCAAAAAACAAATAACCCCATTAAAAAGTTGACAAATAGCATGAACAGACACTTCTCAAAAGAAGATAGTTAAGCAGCCAACAAATAAGAAAAAATG\tA\t.\tPASS\tAC=166;AF=0.0439735;AFR_AF=0.016;AMR_AF=0.0782;AN=3775;CS=DEL_pindel;EAS_AF=0.0812;END=115208291;EUR_AF=0.0339;NS=2504;SAS_AF=0.0292;SVTYPE=DEL\tGT\t0\nX\t115216698\tDEL_pindel_54364\tGAACAGGAAAAGTCCTAGAGAGACAGTGTTTGCCATGGGCTGGGTGTGGCCACAGGATAGAGAATTACTGCAGCGTCTGTGGGATTTCTTTTTGAGGTGATGAAAATATTATAAATTTAGATAGTGATGATGCTGGCATAGGTCTGTGGATATACAAAAAATCACTGTATTATACACTTCAAAATGAATT\tG\t.\tPASS\tAC=952;AF=0.252185;AFR_AF=0.2183;AMR_AF=0.2576;AN=3775;CS=DEL_pindel;EAS_AF=0.2696;END=115216887;EUR_AF=0.2598;NS=2504;SAS_AF=0.2688;SVTYPE=DEL\tGT\t1\nX\t115374652\tYL_CN_KHV_5066\tC\t<CN0>\t100\tPASS\tAC=5;AF=0.0015894;AFR_AF=0.003;AMR_AF=0;AN=2542;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0.0013;END=115382115;EUR_AF=0.0026;NS=2504;SAS_AF=0;SVTYPE=DEL\tGT\t.\nX\t115491990\tDEL_pindel_54369\tCCACACTACTCTCTGTCTTTTCTAAAGTGTTTGCTGTGAAGGAGACACAAATATTACATGTTATCTACTGTCTTGCTAGGACAAAAACATGAAATTAAAATCCATTCATGATGAGATCATGTCTCTGAAGGATTCAGAATAATTATTTGGTATAGTCATTTATATGGTGTATTAGTCCATTCTCATGCTGCTATAAGGACATACTCAAGACTGGGTAATTTATAAAGGAAAGAGGTTTAATTGACTCACAGTTCCACGTGGCTAGGGAGGCTTCAGGAAACTTACAATCATGGTGGAAGGGGAAGCAAA\tC\t.\tPASS\tAC=93;AF=0.0246358;AFR_AF=0.006;AMR_AF=0.0573;AN=3775;CS=DEL_pindel;EAS_AF=0.0262;END=115492298;EUR_AF=0.0352;NS=2504;SAS_AF=0.0139;SVTYPE=DEL\tGT\t0\nX\t115498834\tDEL_pindel_54370\tATGGAAATTAAAATGGATTCCTTAGACACAAAGGGCTTAGCCTCACTACACTAGC\tA\t.\tPASS\tAC=864;AF=0.228874;AFR_AF=0.2283;AMR_AF=0.2214;AN=3775;CS=DEL_pindel;EAS_AF=0.2304;END=115498888;EUR_AF=0.2337;NS=2504;SAS_AF=0.2284;SVTYPE=DEL\tGT\t1\nX\t115505238\tDEL_pindel_54371\tAAGAAATGGAAGGATACTCATTATGCTGGTTGCCCCTAGAGAGTATATGTGTGTGGATGGAGAAAATAAAATGGAATTTTGGATGAGGATAAAGATTACTTCAATTTTACCTGTAATATTTGATTTCCTTTATTTTTTAAAAAAGAATGGCAAAATGTTAAAGTCATAGTCTGTTTAGTGTTATAAAGGAATACTTAAGGCTGGGTAATTTATAAAGAGCAGAGATTTATTTGGCTCATTATTCTGATGTCTGGAAAAGTTTTAGATTGGCCATTGTATTTGGTAGGGGCCACAGGCTGCTTTCTCTCATGGCGGAAGGTAAAAAGAAGCTGGCATGTATAAATATCACATGGCAAGAGAGGATGCAAGGGGTGAGGCGTACCACGCTCTTTTTAACAACCAGCTTTCTTGGAAACTAATAATCGTGAGAATTCACTCACCCCTAAGAAAGGATATTATTCTATTCATGAGGAATCTTCCCCCATGAGCCAAACTCCTGCTACTATACCCACCTTCCAACACTGCCACACGGAGTATTAAATTTCAACATGAGATTTACAGGGGACAAACATCCAAAGTACAGCAGTTAATAATTTCCTATTCTGGGTAGTAGGCTTTTTTTTTTTTTAATAAAAATGTTTTTATTTTTGCTTTTATATTGAGTACTCAAAAAAAAAAAAAAAAAGGAAAAGAAAGGTAATTAACCAAAACAAGAACAAGTCAATGCATGATAAATGCTGAATGGGTGATATGCAATTTGCTCCTTCCCTCCCTTGTTTCTTTCTTTCTTAGCTTCCTTTATGTCTTTCAATAATACCAGCCCACTCTACCAGAACTTATTTTTTTCATGATGACATGAATTCCTGTCCAAATTTCAACTCAATTGTTCGG\tA\t.\tPASS\tAC=489;AF=0.129536;AFR_AF=0.0628;AMR_AF=0.1431;AN=3775;CS=DEL_pindel;EAS_AF=0.1832;END=115506128;EUR_AF=0.1423;NS=2504;SAS_AF=0.1421;SVTYPE=DEL\tGT\t1\nX\t115538506\tUW_VH_17728\tT\t<CN0>\t100\tPASS\tAC=10;AF=0.00264901;AFR_AF=0.005;AMR_AF=0.0019;AN=2542;CIEND=0,192;CIPOS=-201,0;CS=DEL_union;EAS_AF=0;END=115543278;EUR_AF=0.0052;MC=EM_DL_DEL106765;NS=2504;SAS_AF=0;SVTYPE=DEL\tGT\t.\nX\t115544162\tBI_GS_DEL1_B4_P3013_81\tG\t<CN0>\t100\tPASS\tAC=96;AF=0.153642;AFR_AF=0.1655;AMR_AF=0.1393;AN=2542;CIEND=-42,43;CIPOS=-42,43;CS=DEL_union;EAS_AF=0.1505;END=115545105;EUR_AF=0.158;NS=2504;SAS_AF=0.1462;SVTYPE=DEL\tGT\t.\nX\t115754331\tALU_umary_ALU_12764\tA\t<INS:ME:ALU>\t.\tPASS\tAC=31;AF=0.00821192;AFR_AF=0.0289;AMR_AF=0.0038;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0;MEINFO=AluUndef,3,281,-;NS=2504;SAS_AF=0;SVLEN=278;SVTYPE=ALU;TSD=null\tGT\t0\nX\t115787921\tYL_CN_GWD_5924\tT\t<CN0>\t100\tPASS\tAC=11;AF=0.00291391;AFR_AF=0.003;AMR_AF=0.0057;AN=2542;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0;END=115847146;EUR_AF=0.0065;MC=BI_GS_DEL1_B3_P3013_29;NS=2504;SAS_AF=0;SVTYPE=DEL\tGT\t.\nX\t115935706\tDUP_gs.X_CNV_X_115935706_116029510\tA\t<CN0>,<CN2>\t.\tPASS\tAC=0,8;AF=0,0.00211921;AFR_AF=0,0;AMR_AF=0,0;AN=3775;CS=DUP_gs;EAS_AF=0,0.0013;END=116029510;EUR_AF=0,0.0078;NS=2504;SAS_AF=0,0.0014;SVTYPE=DUP\tGT\t0\nX\t115986169\tYL_CN_GBR_4572\tC\t<CN0>\t100\tPASS\tAC=7;AF=0.0018543;AFR_AF=0.002;AMR_AF=0;AN=2542;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0;END=115999068;EUR_AF=0.0065;NS=2504;SAS_AF=0;SVTYPE=DEL\tGT\t.\nX\t116022095\tBI_GS_DEL1_B3_P3014_2\tA\t<CN0>\t100\tPASS\tAC=31;AF=0.0818543;AFR_AF=0.0847;AMR_AF=0.0763;AN=2542;CIEND=-17,17;CIPOS=-17,17;CS=DEL_union;EAS_AF=0.0785;END=116023545;EUR_AF=0.0901;NS=2504;SAS_AF=0.0766;SVTYPE=DEL\tGT\t.\nX\t116025285\tL1_umary_LINE1_3114\tA\t<INS:ME:LINE1>\t.\tPASS\tAC=493;AF=0.130596;AFR_AF=0.0548;AMR_AF=0.1431;AN=3775;CS=L1_umary;EAS_AF=0.2618;EUR_AF=0.0561;MEINFO=LINE1,5399,5986,+;NS=2504;SAS_AF=0.1671;SVLEN=587;SVTYPE=LINE1;TSD=AA\tGT\t0\nX\t116059928\tDEL_pindel_54380\tTTCTTGCCATTCCAGTTGAAGAGAGACAATTTGACATCTTAGAGATGGCTGCATGCAAGCATTTAAACCTGTGAGAGAATGCAGTGCA\tT\t.\tPASS\tAC=641;AF=0.169801;AFR_AF=0.1515;AMR_AF=0.1737;AN=3775;CS=DEL_pindel;EAS_AF=0.1885;END=116060015;EUR_AF=0.1775;NS=2504;SAS_AF=0.1643;SVTYPE=DEL\tGT\t1\nX\t116072766\tDUP_gs.X_CNV_X_116072766_116098248\tG\t<CN0>,<CN2>\t.\tPASS\tAC=1,5;AF=0.0002649,0.0013245;AFR_AF=0,0;AMR_AF=0.0019,0;AN=3775;CS=DUP_gs;EAS_AF=0,0.0039;END=116098248;EUR_AF=0,0.0013;NS=2504;SAS_AF=0,0.0014;SVTYPE=CNV\tGT\t0\nX\t116109172\tBI_GS_DEL2_B1_P0613_1\tT\t<CN0>\t100\tPASS\tAC=9;AF=0.00238411;AFR_AF=0.002;AMR_AF=0.0038;AN=2542;CIEND=-50,50;CIPOS=-50,50;CS=DEL_union;EAS_AF=0;END=116302603;EUR_AF=0.0065;MC=YL_CN_CLM_3910;NS=2504;SAS_AF=0;SVTYPE=DEL\tGT\t.\nX\t116121000\tBI_GS_DEL1_B3_P3014_5\tT\t<CN0>\t100\tPASS\tAC=10;AF=0.00291391;AFR_AF=0.005;AMR_AF=0.0019;AN=2542;CIEND=-3,4;CIPOS=-3,4;CS=DEL_union;EAS_AF=0;END=116133556;EUR_AF=0.0065;MC=YL_CN_GWD_5925;NS=2504;SAS_AF=0;SVTYPE=DEL\tGT\t.\nX\t116126382\tDEL_pindel_54383\tCTAAAGTGCAGTGGCATGATCATAGCACACTGCAACGTTGAACTCCTGGGCTCAAGGCATCCTCCTGCCTCAGCCTCTCAAGGAGT\tC\t.\tPASS\tAC=838;AF=0.221987;AFR_AF=0.2084;AMR_AF=0.2347;AN=3775;CS=DEL_pindel;EAS_AF=0.2277;END=116126467;EUR_AF=0.2193;NS=2504;SAS_AF=0.2284;SVTYPE=DEL\tGT\t1\nX\t116380300\tALU_umary_ALU_12765\tA\t<INS:ME:ALU>\t.\tPASS\tAC=2;AF=0.0005298;AFR_AF=0;AMR_AF=0;AN=3775;CS=ALU_umary;EAS_AF=0.0026;EUR_AF=0;MEINFO=AluUndef,1,271,+;NS=2504;SAS_AF=0;SVLEN=270;SVTYPE=ALU;TSD=null\tGT\t0\nX\t116438555\tALU_umary_ALU_12766\tG\t<INS:ME:ALU>\t.\tPASS\tAC=197;AF=0.0521854;AFR_AF=0.0788;AMR_AF=0.0305;AN=3775;CS=ALU_umary;EAS_AF=0.0105;EUR_AF=0.0587;MEINFO=AluYa4_3,23,281,+;NS=2504;SAS_AF=0.0682;SVLEN=258;SVTYPE=ALU;TSD=AAGAGTGAATGCTG\tGT\t0\nX\t116454345\tDEL_pindel_54389\tTAGAAATGCAAATTCTGGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTGGTGGTGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCATGAACCCAAGAGGCGGAGCTTGCAGTGAGCCGGGATAGCGCCACTGCAGTCCAGCTTGGGCGAAAGAGTGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAGAAA\tT\t.\tPASS\tAC=1600;AF=0.423841;AFR_AF=0.4606;AMR_AF=0.4332;AN=3775;CS=DEL_pindel;EAS_AF=0.2945;END=116454664;EUR_AF=0.4974;MEINFO=AluYb,1,281,+;NS=2504;SAS_AF=0.4248;SVTYPE=DEL_ALU\tGT\t1\nX\t116503005\tDEL_pindel_54390\tGCCATTTTCCTGATCTTTGGTTCAGTTCCCTTGGGGCCAACTATATGCATTTGCAGGAGACCTAGCTAAAGCTGGGGGGTACAGCCTAGAGCCATGGAACACAGCAAAACTGACTAGCTTCACCTCAGGGAAATAAATTCAGGGCCTTCACAAAACATTCTACTAAGAAAGTCAATGTTTACTCTCAAGTTATTTGATTTTCAAGTTATCTGCTTCAATAAGCTTTTTCAC\tG\t.\tPASS\tAC=42;AF=0.0111258;AFR_AF=0.009;AMR_AF=0.0038;AN=3775;CS=DEL_pindel;EAS_AF=0.0118;END=116503235;EUR_AF=0.0117;NS=2504;SAS_AF=0.0181;SVTYPE=DEL\tGT\t1\nX\t116514316\tYL_CN_ACB_5135\tC\t<CN0>\t100\tPASS\tAC=10;AF=0.00264901;AFR_AF=0.005;AMR_AF=0.0019;AN=2542;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0;END=116590069;EUR_AF=0.0052;NS=2504;SAS_AF=0;SVTYPE=DEL\tGT\t.\nX\t116577188\tDEL_pindel_54392\tCTGCATTTCCAACTGAGGTGCCCTGTTCATCTCATTGGGACTGGTTGAACAGTGGGTGCAGCCCACGGAGGGTGAGCCAAAGCAGGGTGGGGCATTTCCTCACATGGGAAGTGCAAGGGGTCAAGGAATTTTCTCCCCTAACCAAGGGAAGCTATGAGGGACTGAGCCTGAGGAGCCACGCACTCTGGCACAGACACTGCACTTTTCCCACGATATTCGCAACCCATAAACCAGGTGATTCTGTCTGGTGCCAACCCCACCACGGCCCTGGGTTT\tC\t.\tPASS\tAC=157;AF=0.0415894;AFR_AF=0.016;AMR_AF=0.0592;AN=3775;CS=DEL_pindel;EAS_AF=0.0707;END=116577462;EUR_AF=0.0431;NS=2504;SAS_AF=0.032;SVTYPE=DEL\tGT\t0\nX\t116610705\tDEL_pindel_54395\tCATATATATATGCATATATATATATATATATATATATATATATATATATATATATATATAT\tC\t.\tPASS\tAC=2452;AF=0.649536;AFR_AF=0.6331;AMR_AF=0.6393;AN=3775;CS=DEL_pindel;EAS_AF=0.6675;END=116610765;EUR_AF=0.6567;NS=2504;SAS_AF=0.6532;SVTYPE=DEL\tGT\t1\nX\t116611894\tDEL_pindel_54396\tTTGGTTCCATATGAATTTTAGAATTGTATTTTCTAACTCTGTGAAGAATGA\tT\t.\tPASS\tAC=1251;AF=0.331391;AFR_AF=0.327;AMR_AF=0.3263;AN=3775;CS=DEL_pindel;EAS_AF=0.3128;END=116611944;EUR_AF=0.3185;NS=2504;SAS_AF=0.3747;SVTYPE=DEL\tGT\t1\nX\t116627646\tALU_umary_ALU_12767\tT\t<INS:ME:ALU>\t.\tPASS\tAC=974;AF=0.258013;AFR_AF=0.0907;AMR_AF=0.2748;AN=3775;CS=ALU_umary;EAS_AF=0.4581;EUR_AF=0.1149;MEINFO=AluYb11,1,277,-;NS=2504;SAS_AF=0.4192;SVLEN=276;SVTYPE=ALU;TSD=AAGTAAAGTACTTATT\tGT\t0\nX\t116720749\tUW_VH_7544\tG\t<CN0>\t100\tPASS\tAC=31;AF=0.0219868;AFR_AF=0.015;AMR_AF=0.0687;AN=2542;CIEND=0,278;CIPOS=-298,0;CS=DEL_union;EAS_AF=0.0223;END=116722788;EUR_AF=0.0131;MC=BI_GS_DEL1_B2_P3014_361;NS=2504;SAS_AF=0.007;SVTYPE=DEL\tGT\t.\nX\t116754602\tBI_GS_DEL1_B2_P3014_373\tC\t<CN0>\t100\tPASS\tAC=6;AF=0.00609272;AFR_AF=0.007;AMR_AF=0.0019;AN=2542;CIEND=-14,14;CIPOS=-14,14;CS=DEL_union;EAS_AF=0.0079;END=116757327;EUR_AF=0.0091;MC=YL_CN_ACB_5136;NS=2504;SAS_AF=0.0028;SVTYPE=DEL\tGT\t.\nX\t116808653\tDEL_pindel_54399\tAGCCCAGAGACTTTGGCATAGAAACAGCTGCAGTGGAACACAGCCAGGGGCACACATCCCCTAAGACTTACCACATCCCTCTAGATGGCTTTGGATTTTGTTGATTGT\tA\t.\tPASS\tAC=258;AF=0.0683444;AFR_AF=0.0249;AMR_AF=0.1221;AN=3775;CS=DEL_pindel;EAS_AF=0.089;END=116808760;EUR_AF=0.0757;NS=2504;SAS_AF=0.0599;SVTYPE=DEL\tGT\t0\nX\t116838864\tALU_umary_ALU_12768\tA\t<INS:ME:ALU>\t.\tPASS\tAC=713;AF=0.188874;AFR_AF=0.1745;AMR_AF=0.1088;AN=3775;CS=ALU_umary;EAS_AF=0.1754;EUR_AF=0.235;MEINFO=AluYc1,1,281,-;NS=2504;SAS_AF=0.2326;SVLEN=280;SVTYPE=ALU;TSD=TAATAATAAATCAA\tGT\t0\nX\t116842016\tBI_GS_DEL1_B2_P3014_412\tA\t<CN0>\t100\tPASS\tAC=63;AF=0.110728;AFR_AF=0.1117;AMR_AF=0.1279;AN=2542;CIEND=-12,13;CIPOS=-12,13;CS=DEL_union;EAS_AF=0.0969;END=116842861;EUR_AF=0.1201;NS=2504;SAS_AF=0.1017;SVTYPE=DEL\tGT\t.\nX\t116914925\tDEL_pindel_54403\tGGAGAAAGAAATAAAGGGTATTCAATTAGGAAAAGAGGAAGTCAAATTGTCCCTGTTTGCAGACAACATGATTGTATATCTAGAAAACCCCATTGTAGCAGCAGAATTTCAAGCATTTACAGAAGAGATTTCTACAAGGAAGGCCTTCC\tG\t.\tPASS\tAC=487;AF=0.129007;AFR_AF=0.0479;AMR_AF=0.1508;AN=3775;CS=DEL_pindel;EAS_AF=0.1623;END=116915073;EUR_AF=0.1449;NS=2504;SAS_AF=0.1741;SVTYPE=DEL\tGT\t1\nX\t116918377\tYL_CN_PJL_5093\tG\t<CN0>\t100\tPASS\tAC=8;AF=0.00211921;AFR_AF=0.002;AMR_AF=0;AN=2542;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0;END=116928487;EUR_AF=0.0065;NS=2504;SAS_AF=0.0014;SVTYPE=DEL\tGT\t.\nX\t116930920\tL1_umary_LINE1_3115\tT\t<INS:ME:LINE1>\t.\tPASS\tAC=1;AF=0.0002649;AFR_AF=0;AMR_AF=0;AN=3775;CS=L1_umary;EAS_AF=0;EUR_AF=0.0013;MEINFO=LINE1,1479,6003,+;NS=2504;SAS_AF=0;SVLEN=4524;SVTYPE=LINE1;TSD=null\tGT\t0\nX\t116979882\tDEL_pindel_54404\tTGAGTTTTGAAAAGTAACAAATTTGGATATGAAGTTAGACAAAGAGCTGGATTGGCACTGTGGCAAGGACTGTTTATTGCTTCCCAACATTTATTCTCCCTTCTTCTTTAACAAAGAGAACCTTGAGTTTTAGTTGAGAATATTCAACACAGAAAATACTGGATTTTCTAGCCTCCCTTTCAGCTAGATGAAGCTATGCTCCTAAATTCAAAAAGGTGAGATGCAAGCAAAAATATTACATGGAACTTCTGGGAAAGACTTCTTCAAA\tT\t.\tPASS\tAC=620;AF=0.164238;AFR_AF=0.0778;AMR_AF=0.1889;AN=3775;CS=DEL_pindel;EAS_AF=0.2107;END=116980149;EUR_AF=0.1932;NS=2504;SAS_AF=0.1866;SVTYPE=DEL\tGT\t1\nX\t117090030\tALU_umary_ALU_12769\tA\t<INS:ME:ALU>\t.\tPASS\tAC=1;AF=0.0002649;AFR_AF=0;AMR_AF=0.0019;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0;MEINFO=AluYa1_1,5,268,+;NS=2504;SAS_AF=0;SVLEN=263;SVTYPE=ALU;TSD=null\tGT\t0\nX\t117112561\tBI_GS_DEL1_B3_P3015_6\tT\t<CN0>\t100\tPASS\tAC=6;AF=0.0018543;AFR_AF=0.003;AMR_AF=0;AN=2542;CIEND=-43,44;CIPOS=-43,44;CS=DEL_union;EAS_AF=0;END=117120259;EUR_AF=0.0039;MC=YL_CN_STU_4651;NS=2504;SAS_AF=0.0014;SVTYPE=DEL\tGT\t.\nX\t117376106\tUW_VH_3607\tG\t<CN0>\t100\tPASS\tAC=115;AF=0.0598675;AFR_AF=0.0808;AMR_AF=0.1126;AN=2542;CIEND=0,118;CIPOS=-212,0;CS=DEL_union;EAS_AF=0.0183;END=117378799;EUR_AF=0.0692;MC=BI_GS_DEL1_B5_P3015_279,YL_CN_TSI_4453;NS=2504;SAS_AF=0.0265;SVTYPE=DEL\tGT\t.\nX\t117454126\tBI_GS_DEL1_B1_P3015_278\tG\t<CN0>\t100\tPASS\tAC=1438;AF=0.596821;AFR_AF=0.7807;AMR_AF=0.6336;AN=2542;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.7264;END=117454959;EUR_AF=0.2807;NS=2504;SAS_AF=0.5125;SVTYPE=DEL\tGT\t.\nX\t117681322\tDEL_pindel_54416\tTCATGTCCTGTTCTCACTTTCATTTTCAAGCCCTGAAAATAATGAATCCAAGTTGTAGGATACTTCCTGTATATCGCTTGCACCTAAG\tT\t.\tPASS\tAC=941;AF=0.249272;AFR_AF=0.2273;AMR_AF=0.25;AN=3775;CS=DEL_pindel;EAS_AF=0.2526;END=117681409;EUR_AF=0.2454;NS=2504;SAS_AF=0.2799;SVTYPE=DEL\tGT\t1\nX\t117758976\tL1_umary_LINE1_3116\tG\t<INS:ME:LINE1>\t.\tPASS\tAC=1;AF=0.0002649;AFR_AF=0;AMR_AF=0;AN=3775;CS=L1_umary;EAS_AF=0.0013;EUR_AF=0;MEINFO=LINE1,1349,5982,+;NS=2504;SAS_AF=0;SVLEN=4633;SVTYPE=LINE1;TSD=null\tGT\t0\nX\t117976514\tUW_VH_8910\tT\t<CN0>\t100\tPASS\tAC=21;AF=0.0169536;AFR_AF=0.0339;AMR_AF=0.0134;AN=2542;CIEND=0,288;CIPOS=-294,0;CS=DEL_union;EAS_AF=0.0065;END=117979494;EUR_AF=0.0157;MC=YL_CN_ACB_5138,EM_DL_DEL106807,BI_GS_DEL1_B2_P3015_411;NS=2504;SAS_AF=0.0084;SVTYPE=DEL\tGT\t.\nX\t118203397\tALU_umary_ALU_12771\tT\t<INS:ME:ALU>\t.\tPASS\tAC=27;AF=0.00715232;AFR_AF=0.0259;AMR_AF=0.0019;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0;MEINFO=AluUndef,1,277,-;NS=2504;SAS_AF=0;SVLEN=276;SVTYPE=ALU;TSD=AAAATACAGACTT\tGT\t0\nX\t118329554\tUW_VH_16921\tG\t<CN0>\t100\tPASS\tAC=15;AF=0.00423841;AFR_AF=0.013;AMR_AF=0;AN=2542;CIEND=0,244;CIPOS=-247,0;CS=DEL_union;EAS_AF=0;END=118337961;EUR_AF=0.0039;MC=BI_GS_DEL1_B3_P3016_13,YL_CN_ESN_4486;NS=2504;SAS_AF=0;SVTYPE=DEL\tGT\t.\nX\t118411168\tYL_CN_CHB_4716\tG\t<CN0>\t100\tPASS\tAC=9;AF=0.00264901;AFR_AF=0.002;AMR_AF=0.0019;AN=2542;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0.0026;END=118469125;EUR_AF=0.0065;MC=BI_GS_DEL1_B4_P3016_60;NS=2504;SAS_AF=0;SVTYPE=DEL\tGT\t.\nX\t118417565\tYL_CN_CHS_4774\tA\t<CN0>\t100\tPASS\tAC=10;AF=0.00264901;AFR_AF=0.003;AMR_AF=0.0019;AN=2542;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0.0013;END=118549627;EUR_AF=0.0065;NS=2504;SAS_AF=0;SVTYPE=DEL\tGT\t.\nX\t118447777\tDEL_pindel_54424\tGAGATTGTAAGGGCCAATGTTGAGAGATAAAATAAGTTCAGTTTCTCTATGAATTAATCATTAATGTCGAAGGCACACTGATGGAAGACCAGCATATGGGCCCCTGTGTCAGATTAATAAGTTTTTCTTGAAGCATTAACCAACTCCTTAATAAAGGTTATAAAGATTATAAAAGGCTTATTGAAGTTATATCTTATGCTCAAGATTAAAATTTTATAGATTGTTTATAAAATTTTGAAAAACAAATTTAATTGGCGTCATGCTGTTTTTATTAGGGCTTATTGTTTGGAAAATAAAGTCTCCTCTCTCAAAGAATGAAGGATTTTGTCTTTTTTTGAAATCCTTGAGTTACCAGTTTGGTGAAATGAATGGCTTATTTTACAATGATCTGTGATATCAAGTGTTTTAAACCTTTGATATTTGACACCTTCCAAAATCAAATTATAAATTATGTCTTTTTCTGATCTAATTAATCCTTTAAGATATTAGGTTCCCCAAAGTCCAAAAATGACATAATTTGGCCTATTTCATATAAACATCATACAGGAAACATTGTCAAGTGTGAAATGGTGTTTGGTTTTCTTTGAGCTGTATCTATATAAATATGTTATTGGTATGTGTTCCAAAATTATGGGAAAGTCCTATAATTCTGATATGACTTACTGTACATAATCAGTAATAATTATAATTGTTTTCTTAAATTATTGTGTGCCACAGAGGCAACAAATTTCCTTGTCCATTGTGTCTTTGACTATGGCTGCCCTAAAACTTTTTTCATCCATGGACAATTTTTGTCTTGTTTTCGTCCTCTTTAGA\tG\t.\tPASS\tAC=393;AF=0.104106;AFR_AF=0.0708;AMR_AF=0.126;AN=3775;CS=DEL_pindel;EAS_AF=0.1296;END=118448592;EUR_AF=0.0979;NS=2504;SAS_AF=0.1142;SVTYPE=DEL\tGT\t1\nX\t118467590\tDUP_gs.X_CNV_X_118467590_118506357\tC\t<CN0>,<CN2>\t.\tPASS\tAC=3,1;AF=0.0007947,0.0002649;AFR_AF=0.002,0;AMR_AF=0,0;AN=3775;CS=DUP_gs;EAS_AF=0.0013,0;END=118506357;EUR_AF=0,0;NS=2504;SAS_AF=0,0.0014;SVTYPE=CNV\tGT\t0\nX\t118486258\tBI_GS_DEL1_B5_P3016_425\tT\t<CN0>\t100\tPASS\tAC=9;AF=0.00264901;AFR_AF=0.002;AMR_AF=0.0019;AN=2542;CIEND=-16,17;CIPOS=-16,17;CS=DEL_union;EAS_AF=0.0013;END=118501298;EUR_AF=0.0065;MC=YL_CN_GIH_3482;NS=2504;SAS_AF=0.0014;SVTYPE=DEL\tGT\t.\nX\t118496267\tDEL_pindel_54426\tTGTCCGGGAGGTGAGGGGCGCCTCAGCCCGGCCGCCCCTACTGGGAAGTGAGGAGCCCCTCTGCCCAGCCAGCCGCCCTGTCCGGGAGGGAGGTGGGGGGGTCAGCCCCCCGCCCGGCCAGCCGCCCC\tT\t.\tPASS\tAC=911;AF=0.241324;AFR_AF=0.2183;AMR_AF=0.2099;AN=3775;CS=DEL_pindel;EAS_AF=0.2435;END=118496394;EUR_AF=0.2258;NS=2504;SAS_AF=0.3106;SVTYPE=DEL\tGT\t0\nX\t118523301\tDEL_pindel_54427\tACTTTGTAACTTCACTTTAGCCTCTGATTGCTTGCACCAGTCAGATGTTTGCATAGGAGTGTGAC\tA\t.\tPASS\tAC=481;AF=0.127417;AFR_AF=0.0957;AMR_AF=0.1317;AN=3775;CS=DEL_pindel;EAS_AF=0.1217;END=118523365;EUR_AF=0.1501;NS=2504;SAS_AF=0.1504;SVTYPE=DEL\tGT\t1\nX\t118873967\tEM_DL_DEL106831\tC\t<CN0>\t100\tPASS\tAC=1545;AF=0.609536;AFR_AF=0.5474;AMR_AF=0.6508;AN=2542;CIEND=-150,150;CIPOS=-150,150;CS=DEL_union;EAS_AF=0.4725;END=118876560;EUR_AF=0.7546;MC=YL_CN_MXL_3783,UW_VH_11602,UW_VH_8099,YL_CN_PUR_5728,YL_CN_LWK_4268,UW_VH_10051,UW_VH_6931,BI_GS_DEL1_B4_P3016_112,UW_VH_18626,UW_VH_56,UW_VH_21698;NS=2504;SAS_AF=0.6574;SVTYPE=DEL\tGT\t.\nX\t118908738\tBI_GS_DEL1_B3_P3016_25\tC\t<CN0>\t100\tPASS\tAC=7;AF=0.00688742;AFR_AF=0.004;AMR_AF=0.0076;AN=2542;CIEND=-50,50;CIPOS=-50,50;CS=DEL_union;EAS_AF=0.0065;END=118911083;EUR_AF=0.0078;NS=2504;SAS_AF=0.0097;SVTYPE=DEL\tGT\t.\nX\t118949933\tBI_GS_DEL1_B4_P3016_123\tC\t<CN0>\t100\tPASS\tAC=109;AF=0.135894;AFR_AF=0.0987;AMR_AF=0.1641;AN=2542;CIEND=-23,24;CIPOS=-23,24;CS=DEL_union;EAS_AF=0.1309;END=118951131;EUR_AF=0.1567;NS=2504;SAS_AF=0.1504;SVTYPE=DEL\tGT\t.\nX\t119029253\tDUP_gs.X_CNV_X_119029253_119058207\tA\t<CN0>,<CN2>,<CN3>\t.\tPASS\tAC=1,22,35;AF=0.0002649,0.00582781,0.00927152;AFR_AF=0.001,0.0219,0.0339;AMR_AF=0,0,0.0019;AN=3775;CS=DUP_gs;EAS_AF=0,0,0;END=119058207;EUR_AF=0,0,0;NS=2504;SAS_AF=0,0,0;SVTYPE=CNV\tGT\t0\nX\t119033750\tDUP_gs.X_CNV_X_119033750_119067483\tG\t<CN0>,<CN2>\t.\tPASS\tAC=1,62;AF=0.0002649,0.0164238;AFR_AF=0.001,0.0608;AMR_AF=0,0.0019;AN=3775;CS=DUP_gs;EAS_AF=0,0;END=119067483;EUR_AF=0,0;NS=2504;SAS_AF=0,0;SVTYPE=CNV\tGT\t0\nX\t119036694\tDUP_gs.X_CNV_X_119036694_119055824\tG\t<CN0>,<CN2>,<CN3>\t.\tPASS\tAC=0,19,37;AF=0,0.00503311,0.00980132;AFR_AF=0,0.0189,0.0359;AMR_AF=0,0,0.0019;AN=3775;CS=DUP_gs;EAS_AF=0,0,0;END=119055824;EUR_AF=0,0,0;NS=2504;SAS_AF=0,0,0;SVTYPE=CNV\tGT\t0\nX\t119083053\tYL_CN_PUR_5729\tC\t<CN0>\t100\tPASS\tAC=8;AF=0.00238411;AFR_AF=0.003;AMR_AF=0.0038;AN=2542;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0;END=119100549;EUR_AF=0.0052;MC=BI_GS_DEL1_B2_P3017_20;NS=2504;SAS_AF=0;SVTYPE=DEL\tGT\t.\nX\t119267168\tSVA_umary_SVA_846\tA\t<INS:ME:SVA>\t.\tPASS\tAC=5;AF=0.0013245;AFR_AF=0;AMR_AF=0;AN=3775;CS=SVA_umary;EAS_AF=0;EUR_AF=0.0013;MEINFO=SVA,1049,1615,+;NS=2504;SAS_AF=0.0056;SVLEN=566;SVTYPE=SVA;TSD=null\tGT\t0\nX\t119486851\tYL_CN_STU_4654\tT\t<CN0>\t100\tPASS\tAC=7;AF=0.00211921;AFR_AF=0.002;AMR_AF=0.0019;AN=2542;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0;END=119531340;EUR_AF=0.0052;NS=2504;SAS_AF=0.0014;SVTYPE=DEL\tGT\t.\nX\t119527856\tALU_umary_ALU_12772\tT\t<INS:ME:ALU>\t.\tPASS\tAC=922;AF=0.244238;AFR_AF=0.0937;AMR_AF=0.2557;AN=3775;CS=ALU_umary;EAS_AF=0.2016;EUR_AF=0.453;MEINFO=AluUndef,9,281,-;NS=2504;SAS_AF=0.2688;SVLEN=272;SVTYPE=ALU;TSD=TCTGTTGTGGTTTT\tGT\t1\nX\t119684366\tL1_umary_LINE1_3117\tG\t<INS:ME:LINE1>\t.\tPASS\tAC=1;AF=0.0002649;AFR_AF=0;AMR_AF=0;AN=3775;CS=L1_umary;EAS_AF=0.0013;EUR_AF=0;MEINFO=LINE1,1,5966,+;NS=2504;SAS_AF=0;SVLEN=5965;SVTYPE=LINE1;TSD=AAAAGCCTTCCTGG\tGT\t0\nX\t119839399\tBI_GS_DEL1_B3_P3017_22\tA\t<CN0>\t100\tPASS\tAC=11;AF=0.00317881;AFR_AF=0.009;AMR_AF=0.0019;AN=2542;CIEND=-19,20;CIPOS=-19,20;CS=DEL_union;EAS_AF=0;END=119843259;EUR_AF=0.0026;NS=2504;SAS_AF=0;SVTYPE=DEL\tGT\t.\nX\t119892844\tL1_umary_LINE1_3118\tT\t<INS:ME:LINE1>\t.\tPASS\tAC=580;AF=0.153642;AFR_AF=0.0837;AMR_AF=0.187;AN=3775;CS=L1_umary;EAS_AF=0.038;EUR_AF=0.3094;MEINFO=LINE1,2921,6019,-;NS=2504;SAS_AF=0.1838;SVLEN=3098;SVTYPE=LINE1;TSD=CATGTCTTTCTTTT\tGT\t0\nX\t119951623\tEM_DL_DEL106847\tG\t<CN0>\t100\tPASS\tAC=7;AF=0.00211921;AFR_AF=0.003;AMR_AF=0;AN=2542;CIEND=-150,150;CIPOS=-150,150;CS=DEL_union;EAS_AF=0.0013;END=119955626;EUR_AF=0.0039;NS=2504;SAS_AF=0.0014;SVTYPE=DEL\tGT\t.\nX\t120160584\tBI_GS_DEL1_B5_P3018_48\tG\t<CN0>\t100\tPASS\tAC=7;AF=0.0018543;AFR_AF=0.002;AMR_AF=0;AN=2542;CIEND=-21,21;CIPOS=-21,21;CS=DEL_union;EAS_AF=0;END=120168106;EUR_AF=0.0065;MC=YL_CN_TSI_4456;NS=2504;SAS_AF=0;SVTYPE=DEL\tGT\t.\nX\t120404314\tALU_umary_ALU_12773\tC\t<INS:ME:ALU>\t.\tPASS\tAC=3;AF=0.0007947;AFR_AF=0.002;AMR_AF=0.0019;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0;MEINFO=AluYc1,2,281,+;NS=2504;SAS_AF=0;SVLEN=279;SVTYPE=ALU;TSD=null\tGT\t0\nX\t120532520\tBI_GS_DEL1_B1_P3018_263\tT\t<CN0>\t100\tPASS\tAC=25;AF=0.0601325;AFR_AF=0.0688;AMR_AF=0.0458;AN=2542;CIEND=-7,7;CIPOS=-7,7;CS=DEL_union;EAS_AF=0.0576;END=120533981;EUR_AF=0.0574;NS=2504;SAS_AF=0.0641;SVTYPE=DEL\tGT\t.\nX\t120549880\tYL_CN_ITU_4743\tC\t<CN0>\t100\tPASS\tAC=10;AF=0.00264901;AFR_AF=0.003;AMR_AF=0.0019;AN=2542;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0;END=120677946;EUR_AF=0.0065;MC=BI_GS_DEL2_B4_P0614_1;NS=2504;SAS_AF=0.0014;SVTYPE=DEL\tGT\t.\nX\t120588422\tUW_VH_5680\tG\t<CN0>\t100\tPASS\tAC=99;AF=0.125298;AFR_AF=0.1047;AMR_AF=0.1298;AN=2542;CIEND=0,338;CIPOS=-383,0;CS=DEL_union;EAS_AF=0.1518;END=120589335;EUR_AF=0.1397;MC=BI_GS_DEL1_B2_P3018_220;NS=2504;SAS_AF=0.1072;SVTYPE=DEL\tGT\t.\nX\t120612508\tDUP_gs.X_CNV_X_120612508_120617824\tC\t<CN0>,<CN2>\t.\tPASS\tAC=2,1;AF=0.0005298,0.0002649;AFR_AF=0,0;AMR_AF=0,0;AN=3775;CS=DUP_gs;EAS_AF=0,0;END=120617824;EUR_AF=0.0013,0;NS=2504;SAS_AF=0.0014,0.0014;SVTYPE=CNV\tGT\t0\nX\t120774102\tUW_VH_4604\tT\t<CN0>\t100\tPASS\tAC=7;AF=0.0116556;AFR_AF=0.005;AMR_AF=0.0076;AN=2542;CIEND=0,180;CIPOS=-145,0;CS=DEL_union;EAS_AF=0.0105;END=120776600;EUR_AF=0.0313;MC=BI_GS_DEL1_B1_P3018_402;NS=2504;SAS_AF=0.0042;SVTYPE=DEL\tGT\t.\nX\t120798244\tBI_GS_DEL1_B3_P3018_25\tA\t<CN0>\t100\tPASS\tAC=9;AF=0.00291391;AFR_AF=0.004;AMR_AF=0;AN=2542;CIEND=-1,2;CIPOS=-1,2;CS=DEL_union;EAS_AF=0;END=120814269;EUR_AF=0.0091;MC=YL_CN_ASW_4608;NS=2504;SAS_AF=0;SVTYPE=DEL\tGT\t.\nX\t120801576\tYL_CN_FIN_4348\tA\t<CN0>\t100\tPASS\tAC=10;AF=0.00291391;AFR_AF=0.003;AMR_AF=0.0019;AN=2542;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0;END=120932895;EUR_AF=0.0091;MC=BI_GS_DEL2_B1_P0614_1;NS=2504;SAS_AF=0;SVTYPE=DEL\tGT\t.\nX\t120889998\tYL_CN_ITU_4744\tG\t<CN0>\t100\tPASS\tAC=12;AF=0.00317881;AFR_AF=0.003;AMR_AF=0.0019;AN=2542;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0;END=120952700;EUR_AF=0.0052;MC=BI_GS_DEL1_B4_P3018_105;NS=2504;SAS_AF=0.0056;SVTYPE=DEL\tGT\t.\nX\t120912381\tALU_umary_ALU_12774\tA\t<INS:ME:ALU>\t.\tPASS\tAC=1;AF=0.0002649;AFR_AF=0;AMR_AF=0;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0;MEINFO=AluUndef,8,281,-;NS=2504;SAS_AF=0.0014;SVLEN=273;SVTYPE=ALU;TSD=null\tGT\t0\nX\t120974952\tBI_GS_DEL1_B5_P3018_657\tA\t<CN0>\t100\tPASS\tAC=73;AF=0.0352318;AFR_AF=0.1017;AMR_AF=0.0172;AN=2542;CIEND=-45,46;CIPOS=-45,46;CS=DEL_union;EAS_AF=0.0105;END=120978752;EUR_AF=0.0091;MC=YL_CN_LWK_4270,YL_CN_ESN_4490;NS=2504;SAS_AF=0.0097;SVTYPE=DEL\tGT\t.\nX\t121009409\tDEL_pindel_54466\tTTTTATATGAACTGCCTATGTAAATATCAATTAATATGAACTGCCTATGTAAATATCAA\tT\t.\tPASS\tAC=664;AF=0.175894;AFR_AF=0.1565;AMR_AF=0.1794;AN=3775;CS=DEL_pindel;EAS_AF=0.2238;END=121009467;EUR_AF=0.1514;NS=2504;SAS_AF=0.1755;SVTYPE=DEL\tGT\t1\nX\t121054411\tDUP_gs.X_CNV_X_121054411_121066916\tT\t<CN0>,<CN2>\t.\tPASS\tAC=2,1;AF=0.0005298,0.0002649;AFR_AF=0.002,0.001;AMR_AF=0,0;AN=3775;CS=DUP_gs;EAS_AF=0,0;END=121066916;EUR_AF=0,0;NS=2504;SAS_AF=0,0;SVTYPE=CNV\tGT\t0\nX\t121268952\tYL_CN_LWK_4271\tA\t<CN0>\t100\tPASS\tAC=8;AF=0.00238411;AFR_AF=0.004;AMR_AF=0.0019;AN=2542;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0;END=121378787;EUR_AF=0.0052;MC=BI_GS_DEL2_B4_P0614_2;NS=2504;SAS_AF=0;SVTYPE=DEL\tGT\t.\nX\t121308064\tBI_GS_DEL1_B1_P3019_174\tT\t<CN0>\t100\tPASS\tAC=27;AF=0.00847682;AFR_AF=0.003;AMR_AF=0.0229;AN=2542;CIEND=-24,25;CIPOS=-24,25;CS=DEL_union;EAS_AF=0.0013;END=121315515;EUR_AF=0.017;NS=2504;SAS_AF=0.0042;SVTYPE=DEL\tGT\t.\nX\t121386279\tDEL_pindel_54473\tGGAGGAAGGCCTGAGAGCCCCTGGCAAATCACTGGTGTAAGTCCAAAAGTCCAAAAGCTGAAGAACTTGGAGTCTGATGTTTGAGGTCAGGAAGCATACAGCACAGGAGAAAAATGAAGGCTGGAAGACTCAGCAAGTCTGCTCTTTCCAACTTCTTCTGCCTCCTTTATTCTAGCTACATTGAAAGCTGATTAGATGGTGGCCACCCAGATGGAGGGCGGGTCTGCCTCTCCCAGTCCAC\tG\t.\tPASS\tAC=260;AF=0.0688742;AFR_AF=0.009;AMR_AF=0.0782;AN=3775;CS=DEL_pindel;EAS_AF=0.1034;END=121386519;EUR_AF=0.0875;NS=2504;SAS_AF=0.0891;SVTYPE=DEL\tGT\t1\nX\t121569332\tALU_umary_ALU_12775\tT\t<INS:ME:ALU>\t.\tPASS\tAC=584;AF=0.154702;AFR_AF=0.2592;AMR_AF=0.0878;AN=3775;CS=ALU_umary;EAS_AF=0.1505;EUR_AF=0.077;MEINFO=AluYb8,2,275,-;NS=2504;SAS_AF=0.1448;SVLEN=273;SVTYPE=ALU;TSD=GTCATCTACAATTTCTTTCTT\tGT\t0\nX\t121581286\tALU_umary_ALU_12776\tG\t<INS:ME:ALU>\t.\tPASS\tAC=2;AF=0.0005298;AFR_AF=0.002;AMR_AF=0;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0;MEINFO=AluUndef,1,277,+;NS=2504;SAS_AF=0;SVLEN=276;SVTYPE=ALU;TSD=null\tGT\t0\nX\t121760094\tL1_umary_LINE1_3120\tT\t<INS:ME:LINE1>\t.\tPASS\tAC=49;AF=0.0129801;AFR_AF=0.0439;AMR_AF=0.0095;AN=3775;CS=L1_umary;EAS_AF=0;EUR_AF=0;MEINFO=LINE1,5544,6019,-;NS=2504;SAS_AF=0;SVLEN=475;SVTYPE=LINE1;TSD=null\tGT\t0\nX\t121780153\tBI_GS_DEL1_B5_P3019_554\tC\t<CN0>\t100\tPASS\tAC=9;AF=0.00291391;AFR_AF=0.007;AMR_AF=0.0019;AN=2542;CIEND=-1,1;CIPOS=-1,1;CS=DEL_union;EAS_AF=0;END=121787535;EUR_AF=0.0039;MC=YL_CN_PEL_4379;NS=2504;SAS_AF=0;SVTYPE=DEL\tGT\t.\nX\t121912788\tDEL_pindel_54484\tGGGTCTTAACAGAAATAGACAGTGAATCTGGACTGGGATTTGCTTACCTGGTAGAAGACAAAAATGTTCAGAATGCTGTGA\tG\t.\tPASS\tAC=892;AF=0.236291;AFR_AF=0.1964;AMR_AF=0.2557;AN=3775;CS=DEL_pindel;EAS_AF=0.2343;END=121912868;EUR_AF=0.2428;NS=2504;SAS_AF=0.273;SVTYPE=DEL\tGT\t1\nX\t121946120\tDUP_gs.X_CNV_X_121946120_121949175\tA\t<CN0>,<CN2>\t.\tPASS\tAC=13,2;AF=0.00344371,0.0005298;AFR_AF=0.012,0.001;AMR_AF=0.0019,0;AN=3775;CS=DUP_gs;EAS_AF=0,0.0013;END=121949175;EUR_AF=0,0;NS=2504;SAS_AF=0,0;SVTYPE=CNV\tGT\t0\nX\t121977572\tDEL_pindel_54485\tCTTTGAATACAGCTACTTCTCAAAATCTACTCTACTGGGGGCATTTTCCTAATTATCTTATTACTGCCCCCTCTTATTTCATGATATCGGGTAAGGCAGCATTTAG\tC\t.\tPASS\tAC=1141;AF=0.302252;AFR_AF=0.2911;AMR_AF=0.2958;AN=3775;CS=DEL_pindel;EAS_AF=0.2971;END=121977677;EUR_AF=0.295;NS=2504;SAS_AF=0.3357;SVTYPE=DEL\tGT\t1\nX\t122114608\tDUP_gs.X_CNV_X_122114608_122143121\tA\t<CN0>,<CN2>\t.\tPASS\tAC=0,1;AF=0,0.0002649;AFR_AF=0,0.001;AMR_AF=0,0;AN=3775;CS=DUP_gs;EAS_AF=0,0;END=122143121;EUR_AF=0,0;NS=2504;SAS_AF=0,0;SVTYPE=DUP\tGT\t0\nX\t122131124\tDUP_gs.X_CNV_X_122131124_122137898\tG\t<CN0>,<CN2>\t.\tPASS\tAC=3,1;AF=0.0007947,0.0002649;AFR_AF=0,0.001;AMR_AF=0,0;AN=3775;CS=DUP_gs;EAS_AF=0,0;END=122137898;EUR_AF=0,0;NS=2504;SAS_AF=0.0042,0;SVTYPE=CNV\tGT\t0\nX\t122156938\tDEL_pindel_54490\tAGAAACAAGAACACACCAAACCCAAATCCAGCAGAAGAAAGGAAATAACCAAGATCAGAGCAGAACTAAATGAAATTGAAACCAAAAAAATACAAAAGATAAATGAAACAAAATGCTGATTCTTTGAAAAGTGAAATAAAATT\tA\t.\tPASS\tAC=346;AF=0.0916556;AFR_AF=0.0209;AMR_AF=0.1164;AN=3775;CS=DEL_pindel;EAS_AF=0.1165;END=122157080;EUR_AF=0.1397;NS=2504;SAS_AF=0.0947;SVTYPE=DEL\tGT\t1\nX\t122185498\tDEL_pindel_54492\tCAAAAACAGGCAATGGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAATACAAAAAAAAATTAGCCGGGCGCGGTGGCGGGCGCCTGTAGTCCCAGCTACTGGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCCGGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACAAAAA\tC\t.\tPASS\tAC=2508;AF=0.664371;AFR_AF=0.662;AMR_AF=0.6603;AN=3775;CS=DEL_pindel;EAS_AF=0.6466;END=122185850;EUR_AF=0.6958;MEINFO=AluYb5,1,281,+;NS=2504;SAS_AF=0.656;SVTYPE=DEL_ALU\tGT\t0\nX\t122219030\tUW_VH_20119\tA\t<CN0>\t100\tPASS\tAC=9;AF=0.00238411;AFR_AF=0.002;AMR_AF=0.0019;AN=2542;CIEND=0,51;CIPOS=-30,0;CS=DEL_union;EAS_AF=0;END=122223855;EUR_AF=0.0078;NS=2504;SAS_AF=0;SVTYPE=DEL\tGT\t.\nX\t122226272\tL1_umary_LINE1_3121\tC\t<INS:ME:LINE1>\t.\tPASS\tAC=2;AF=0.0005298;AFR_AF=0.002;AMR_AF=0;AN=3775;CS=L1_umary;EAS_AF=0;EUR_AF=0;MEINFO=LINE1,1523,6015,-;NS=2504;SAS_AF=0;SVLEN=4492;SVTYPE=LINE1;TSD=null\tGT\t0\nX\t122235285\tBI_GS_DEL1_B3_P3020_13\tA\t<CN0>\t100\tPASS\tAC=63;AF=0.13351;AFR_AF=0.1306;AMR_AF=0.1546;AN=2542;CIEND=-23,24;CIPOS=-23,24;CS=DEL_union;EAS_AF=0.0929;END=122236168;EUR_AF=0.1345;NS=2504;SAS_AF=0.1643;SVTYPE=DEL\tGT\t.\nX\t122315501\tUW_VH_22186\tA\t<CN0>\t100\tPASS\tAC=47;AF=0.108344;AFR_AF=0.1067;AMR_AF=0.1183;AN=2542;CIEND=0,149;CIPOS=-106,0;CS=DEL_union;EAS_AF=0.1073;END=122316263;EUR_AF=0.1136;MC=BI_GS_DEL1_B5_P3020_260;NS=2504;SAS_AF=0.0989;SVTYPE=DEL\tGT\t.\nX\t122316013\tBI_GS_DEL1_B4_P3020_46\tA\t<CN0>\t100\tPASS\tAC=99;AF=0.167682;AFR_AF=0.1605;AMR_AF=0.1775;AN=2542;CIEND=-2,2;CIPOS=-2,2;CS=DEL_union;EAS_AF=0.161;END=122316578;EUR_AF=0.1632;MC=UW_VH_3747;NS=2504;SAS_AF=0.1825;SVTYPE=DEL\tGT\t.\nX\t122359455\tL1_umary_LINE1_3122\tG\t<INS:ME:LINE1>\t.\tPASS\tAC=1;AF=0.0002649;AFR_AF=0;AMR_AF=0;AN=3775;CS=L1_umary;EAS_AF=0.0013;EUR_AF=0;MEINFO=LINE1,62,385,+;NS=2504;SAS_AF=0;SVLEN=323;SVTYPE=LINE1;TSD=null\tGT\t0\nX\t122372569\tUW_VH_3577\tG\t<CN0>\t100\tPASS\tAC=88;AF=0.0966887;AFR_AF=0.0828;AMR_AF=0.1145;AN=2542;CIEND=0,328;CIPOS=-352,0;CS=DEL_union;EAS_AF=0.0615;END=122373422;EUR_AF=0.1371;MC=EM_DL_DEL101188239,BI_GS_DEL1_B2_P3020_197;NS=2504;SAS_AF=0.0975;SVTYPE=DEL\tGT\t.\nX\t122672378\tALU_umary_ALU_12777\tT\t<INS:ME:ALU>\t.\tPASS\tAC=725;AF=0.192053;AFR_AF=0.0818;AMR_AF=0.2901;AN=3775;CS=ALU_umary;EAS_AF=0.2251;EUR_AF=0.299;MEINFO=AluUndef,1,280,-;NS=2504;SAS_AF=0.1253;SVLEN=279;SVTYPE=ALU;TSD=GATCTCCATTTCTTT\tGT\t0\nX\t122677452\tALU_umary_ALU_12778\tG\t<INS:ME:ALU>\t.\tPASS\tAC=3;AF=0.0007947;AFR_AF=0.003;AMR_AF=0;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0;MEINFO=AluUndef,2,270,+;NS=2504;SAS_AF=0;SVLEN=268;SVTYPE=ALU;TSD=null\tGT\t0\nX\t122731648\tUW_VH_22194\tG\t<CN0>\t100\tPASS\tAC=9;AF=0.00741722;AFR_AF=0.007;AMR_AF=0.0038;AN=2542;CIEND=0,207;CIPOS=-223,0;CS=DEL_union;EAS_AF=0.0052;END=122734078;EUR_AF=0.0157;NS=2504;SAS_AF=0.0042;SVTYPE=DEL\tGT\t.\nX\t122763589\tDEL_pindel_54498\tACAGAGAGTGTTTTTTAATTTAGAGGACAGGTCTTATTGAAGGTAACTAATATGAATCTAGATGAGCAGAATGACTTCTGCTAAGGTT\tA\t.\tPASS\tAC=777;AF=0.205828;AFR_AF=0.1615;AMR_AF=0.2195;AN=3775;CS=DEL_pindel;EAS_AF=0.212;END=122763676;EUR_AF=0.2232;NS=2504;SAS_AF=0.2326;SVTYPE=DEL\tGT\t1\nX\t122853439\tBI_GS_DEL1_B5_P3020_732\tC\t<CN0>\t100\tPASS\tAC=8;AF=0.00211921;AFR_AF=0.003;AMR_AF=0.0038;AN=2542;CIEND=-15,16;CIPOS=-15,16;CS=DEL_union;EAS_AF=0;END=122860363;EUR_AF=0.0039;NS=2504;SAS_AF=0;SVTYPE=DEL\tGT\t.\nX\t122881186\tALU_umary_ALU_12779\tC\t<INS:ME:ALU>\t.\tPASS\tAC=7;AF=0.0018543;AFR_AF=0.007;AMR_AF=0;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0;MEINFO=AluUndef,1,281,+;NS=2504;SAS_AF=0;SVLEN=280;SVTYPE=ALU;TSD=null\tGT\t0\nX\t122922879\tSVA_umary_SVA_847\tG\t<INS:ME:SVA>\t.\tPASS\tAC=226;AF=0.0598675;AFR_AF=0.2124;AMR_AF=0.0248;AN=3775;CS=SVA_umary;EAS_AF=0;EUR_AF=0;MEINFO=SVA,29,1627,+;NS=2504;SAS_AF=0;SVLEN=1598;SVTYPE=SVA;TSD=AGAAAGTAAGATAACAG\tGT\t0\nX\t122951245\tUW_VH_1317\tA\t<CN0>\t100\tPASS\tAC=478;AF=0.190728;AFR_AF=0.5005;AMR_AF=0.1107;AN=2542;CIEND=0,437;CIPOS=-400,0;CS=DEL_union;EAS_AF=0.0131;END=122952841;EUR_AF=0.1319;MC=YL_CN_GWD_5934,YL_CN_YRI_5637,BI_GS_DEL1_B5_P3020_788,YL_CN_ASW_4612,EM_DL_DEL101188364;NS=2504;SAS_AF=0.0682;SVTYPE=DEL\tGT\t.\nX\t122972835\tUW_VH_1339\tT\t<CN0>\t100\tPASS\tAC=577;AF=0.273642;AFR_AF=0.3001;AMR_AF=0.2786;AN=2542;CIEND=0,519;CIPOS=-379,0;CS=DEL_union;EAS_AF=0.2605;END=122973660;EUR_AF=0.3316;MC=BI_GS_DEL1_B1_P3020_623,BI_GS_DEL1_B5_P3020_802;NS=2504;SAS_AF=0.1852;SVTYPE=DEL\tGT\t.\nX\t122977609\tEM_DL_DEL106884\tA\t<CN0>\t100\tPASS\tAC=7;AF=0.00211921;AFR_AF=0.002;AMR_AF=0.0019;AN=2542;CIEND=-150,150;CIPOS=-150,150;CS=DEL_union;EAS_AF=0.0013;END=122985456;EUR_AF=0.0052;NS=2504;SAS_AF=0;SVTYPE=DEL\tGT\t.\nX\t122987653\tBI_GS_DEL1_B4_P3020_123\tC\t<CN0>\t100\tPASS\tAC=9;AF=0.00291391;AFR_AF=0.002;AMR_AF=0.0019;AN=2542;CIEND=-47,48;CIPOS=-47,48;CS=DEL_union;EAS_AF=0.0026;END=122992301;EUR_AF=0.0065;MC=YL_CN_CHB_4720;NS=2504;SAS_AF=0.0014;SVTYPE=DEL\tGT\t.\nX\t122999138\tBI_GS_DEL1_B5_P3020_816\tA\t<CN0>\t100\tPASS\tAC=28;AF=0.0691391;AFR_AF=0.0718;AMR_AF=0.0496;AN=2542;CIEND=-17,18;CIPOS=-17,18;CS=DEL_union;EAS_AF=0.0969;END=123002941;EUR_AF=0.0587;MC=YL_CN_GIH_3485;NS=2504;SAS_AF=0.0613;SVTYPE=DEL\tGT\t.\nX\t123059168\tYL_CN_CHB_4721\tT\t<CN0>\t100\tPASS\tAC=7;AF=0.0018543;AFR_AF=0.002;AMR_AF=0;AN=2542;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0.0026;END=123067187;EUR_AF=0.0039;MC=EM_DL_DEL106886,BI_GS_DEL1_B4_P3021_4;NS=2504;SAS_AF=0;SVTYPE=DEL\tGT\t.\nX\t123154776\tDEL_pindel_54510\tCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACTGCGCCTGGCTGAAAACAAGATTTTAAAATCTGAGTATCTTTCAGAAAAAAAATAAAGTGGTGGTATATGTTATTTGATTATTCAGGATTTAATTTGTGGATTATTCATTCTTGTTTCTCCTATTGCCTCATTTGTTATTTTGCTGTTCACAAAACATAAAATTAATATTTTTCTGTTTTAGCTTAAGTAAGCTAGGAAATACAATGTTTTGAACTTTGTATATTAATTAAATATTAGTAACCATTGATGATGTTTTCTAGAGAGATAAAATTACCA\tC\t.\tPASS\tAC=916;AF=0.242649;AFR_AF=0.2213;AMR_AF=0.2576;AN=3775;CS=DEL_pindel;EAS_AF=0.2369;END=123155087;EUR_AF=0.2415;NS=2504;SAS_AF=0.2688;SVTYPE=DEL\tGT\t1\nX\t123606205\tALU_umary_ALU_12780\tA\t<INS:ME:ALU>\t.\tPASS\tAC=3;AF=0.0007947;AFR_AF=0.002;AMR_AF=0.0019;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0;MEINFO=AluUndef,2,281,+;NS=2504;SAS_AF=0;SVLEN=279;SVTYPE=ALU;TSD=AAAAAAAAAAAAAAAAAAAAAA\tGT\t0\nX\t123611800\tL1_umary_LINE1_3123\tC\t<INS:ME:LINE1>\t.\tPASS\tAC=105;AF=0.0278146;AFR_AF=0.1007;AMR_AF=0.0057;AN=3775;CS=L1_umary;EAS_AF=0.0013;EUR_AF=0;MEINFO=LINE1,5602,6009,-;NS=2504;SAS_AF=0;SVLEN=407;SVTYPE=LINE1;TSD=null\tGT\t0\nX\t123787686\tUW_VH_6826\tG\t<CN0>\t100\tPASS\tAC=8;AF=0.0259603;AFR_AF=0.0219;AMR_AF=0.0153;AN=2542;CIEND=0,242;CIPOS=-219,0;CS=DEL_union;EAS_AF=0.0209;END=123789168;EUR_AF=0.047;MC=BI_GS_DEL1_B1_P3021_467;NS=2504;SAS_AF=0.0223;SVTYPE=DEL\tGT\t.\nX\t123799417\tDEL_pindel_54518\tATACATTTCAACCTCTTTCCAGGAGTATATCCCTTTTGCAAAAATAGGTCCACTTTTACTTGTATTGGCTCATTATTCTTCC\tA\t.\tPASS\tAC=88;AF=0.0233113;AFR_AF=0.0179;AMR_AF=0.0229;AN=3775;CS=DEL_pindel;EAS_AF=0.0275;END=123799498;EUR_AF=0.0274;NS=2504;SAS_AF=0.0223;SVTYPE=DEL\tGT\t0\nX\t123848395\tL1_umary_LINE1_3124\tA\t<INS:ME:LINE1>\t.\tPASS\tAC=1;AF=0.0002649;AFR_AF=0;AMR_AF=0;AN=3775;CS=L1_umary;EAS_AF=0.0013;EUR_AF=0;MEINFO=LINE1,4733,5116,+;NS=2504;SAS_AF=0;SVLEN=383;SVTYPE=LINE1;TSD=null\tGT\t0\nX\t123921260\tL1_umary_LINE1_3125\tT\t<INS:ME:LINE1>\t.\tPASS\tAC=150;AF=0.0397351;AFR_AF=0.1266;AMR_AF=0.0134;AN=3775;CS=L1_umary;EAS_AF=0;EUR_AF=0.0104;MEINFO=LINE1,1,6008,-;NS=2504;SAS_AF=0.0111;SVLEN=6007;SVTYPE=LINE1;TSD=CTATACACAGAATTT\tGT\t0\nX\t123988402\tDEL_pindel_54521\tAGAAAAGTAGATTTATCAGTCCAAACCAAAAATAAGGATGAGTATAAGTCTAGCACATATAGTATCATTCTTTTGGCTT\tA\t.\tPASS\tAC=49;AF=0.0129801;AFR_AF=0.005;AMR_AF=0.0191;AN=3775;CS=DEL_pindel;EAS_AF=0.0105;END=123988480;EUR_AF=0.017;NS=2504;SAS_AF=0.0181;SVTYPE=DEL\tGT\t0\nX\t123992125\tBI_GS_DEL1_B2_P3021_445\tC\t<CN0>\t100\tPASS\tAC=47;AF=0.0752318;AFR_AF=0.0658;AMR_AF=0.0649;AN=2542;CIEND=-11,11;CIPOS=-11,11;CS=DEL_union;EAS_AF=0.0877;END=123993412;EUR_AF=0.0927;NS=2504;SAS_AF=0.0641;SVTYPE=DEL\tGT\t.\nX\t124090199\tBI_GS_DEL1_B5_P3022_73\tA\t<CN0>\t100\tPASS\tAC=7;AF=0.00238411;AFR_AF=0.002;AMR_AF=0;AN=2542;CIEND=-12,12;CIPOS=-12,12;CS=DEL_union;EAS_AF=0;END=124097209;EUR_AF=0.0052;MC=YL_CN_GIH_3486;NS=2504;SAS_AF=0.0042;SVTYPE=DEL\tGT\t.\nX\t124115707\tDEL_pindel_54524\tTAAAAGCAAAAACAGGTGCAGCGCACCAGCATGGCACATGTATACATATGTAACTAACCTGCACAACGTGCACATGTACCCTAAAACTTAGAGTATAATAAAAAAAAAAAAAAAAAAAAAAAATGCAGGAAATGAGAGAATGTCTGCCCCAGACATAGCAGCGTGTGGTAGCGTGATTTTGTCTAAGGTGAATACTGGGTTCATACCATTTTAAGCATTTTTTTTTCTTTAAGCTTCTCTCTCTCATTAGAAGCCCATTTTCTCTACGTGTAAAACAATGGAAGTATTGCCCGAAAAGGTAAAGTGTTGTGCATCTACGTGCTAACTTTTCCAGAGTTAACTCTAAAAAAATGTACTAAGTAGTTTTTGAAATTAGACTCCACTATGCATCTTAATACATAAAAGAAAATGTGAAAAAAAAAAAAAAAAA\tT\t.\tPASS\tAC=1860;AF=0.492715;AFR_AF=0.6391;AMR_AF=0.4637;AN=3775;CS=DEL_pindel;EAS_AF=0.3927;END=124116136;EUR_AF=0.453;NS=2504;SAS_AF=0.4582;SVTYPE=DEL\tGT\t1\nX\t124175500\tBI_GS_DEL1_B3_P3022_8\tT\t<CN0>\t100\tPASS\tAC=12;AF=0.0413245;AFR_AF=0.0469;AMR_AF=0.0344;AN=2542;CIEND=-43,43;CIPOS=-43,43;CS=DEL_union;EAS_AF=0.0314;END=124177908;EUR_AF=0.0548;NS=2504;SAS_AF=0.0348;SVTYPE=DEL\tGT\t.\nX\t124234123\tUW_VH_8911\tA\t<CN0>\t100\tPASS\tAC=19;AF=0.0113907;AFR_AF=0.0229;AMR_AF=0.0095;AN=2542;CIEND=0,186;CIPOS=-142,0;CS=DEL_union;EAS_AF=0.0052;END=124236345;EUR_AF=0.0131;MC=BI_GS_DEL1_B5_P3022_195,EM_DL_DEL106895;NS=2504;SAS_AF=0.0014;SVTYPE=DEL\tGT\t.\nX\t124384088\tL1_umary_LINE1_3126\tA\t<INS:ME:LINE1>\t.\tPASS\tAC=2;AF=0.0005298;AFR_AF=0.002;AMR_AF=0;AN=3775;CS=L1_umary;EAS_AF=0;EUR_AF=0;MEINFO=LINE1,1435,5380,+;NS=2504;SAS_AF=0;SVLEN=3945;SVTYPE=LINE1;TSD=null\tGT\t0\nX\t124516877\tALU_umary_ALU_12781\tG\t<INS:ME:ALU>\t.\tPASS\tAC=1;AF=0.0002649;AFR_AF=0.001;AMR_AF=0;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0;MEINFO=AluYb6_2,18,278,+;NS=2504;SAS_AF=0;SVLEN=260;SVTYPE=ALU;TSD=null\tGT\t0\nX\t124522563\tUW_VH_15064\tA\t<CN0>\t100\tPASS\tAC=13;AF=0.0209271;AFR_AF=0.016;AMR_AF=0.0191;AN=2542;CIEND=0,47;CIPOS=-41,0;CS=DEL_union;EAS_AF=0.034;END=124528065;EUR_AF=0.0287;MC=UW_VH_13874;NS=2504;SAS_AF=0.007;SVTYPE=DEL\tGT\t.\nX\t124553816\tUW_VH_16402\tA\t<CN0>\t100\tPASS\tAC=149;AF=0.213775;AFR_AF=0.2223;AMR_AF=0.1737;AN=2542;CIEND=0,236;CIPOS=-210,0;CS=DEL_union;EAS_AF=0.2134;END=124554440;EUR_AF=0.2154;MC=BI_GS_DEL1_B5_P3022_445;NS=2504;SAS_AF=0.2298;SVTYPE=DEL\tGT\t.\nX\t124591705\tBI_GS_DEL1_B3_P3022_20\tC\t<CN0>\t100\tPASS\tAC=18;AF=0.0315232;AFR_AF=0.0329;AMR_AF=0.0286;AN=2542;CIEND=-3,3;CIPOS=-3,3;CS=DEL_union;EAS_AF=0.0223;END=124593386;EUR_AF=0.0431;NS=2504;SAS_AF=0.0292;SVTYPE=DEL\tGT\t.\nX\t124678004\tBI_GS_DEL1_B5_P3022_532\tA\t<CN0>\t100\tPASS\tAC=6;AF=0.0018543;AFR_AF=0.004;AMR_AF=0;AN=2542;CIEND=-17,18;CIPOS=-17,18;CS=DEL_union;EAS_AF=0;END=124689491;EUR_AF=0.0039;MC=YL_CN_ESN_4495;NS=2504;SAS_AF=0;SVTYPE=DEL\tGT\t.\nX\t124904994\tYL_CN_GIH_3488\tT\t<CN0>\t100\tPASS\tAC=7;AF=0.00211921;AFR_AF=0.002;AMR_AF=0.0019;AN=2542;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0;END=124988751;EUR_AF=0.0052;MC=BI_GS_DEL1_B5_P3022_707;NS=2504;SAS_AF=0.0014;SVTYPE=DEL\tGT\t.\nX\t124991759\tYL_CN_TSI_4465\tG\t<CN0>\t100\tPASS\tAC=20;AF=0.0188079;AFR_AF=0.0189;AMR_AF=0.0153;AN=2542;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0.0079;END=124995155;EUR_AF=0.0405;NS=2504;SAS_AF=0.0097;SVTYPE=DEL\tGT\t.\nX\t124992814\tDEL_pindel_54531\tCTTGTTAAGGTGGTATATGGTACCCAGAAGTTTGAATAATACCTTGAATTTTCACAAATGTAGGATCAGGGGTCATAGAAGAATTCCTCTTAAAAGTACATCTTGGAATTAGCATAACAGGTTGATAAAGAGCATAGGCTTTCTAAGCCTCATAGACTAGGGTTTGAAGCCTGACTCTGTCACTTAATAATAGCAGTGACCTTGGGCAAGTCACTTAACTATTTGAGTCTCAGTCTCTTCATGAATAAAATGATGATAGTAATATTTGCCTCTCAAGTATATTTTAATAACAAAATGTAATAATATGTATATTAAATGTAAAGTATAGTGCCTTGCATATAATAAGCAGTTAATCATTGTTTTACACATTGGGTGGGATTATAGTAATCCTTCATTACATATGACTTGTGTTCAGTTCAGCTTAGTTCACCAAACATTAAGTATGTACAAAGCAACAGACTCCTGCTAAGTTAACCCTAGTGATAAAAATATAAGTAAGACATGA\tC\t.\tPASS\tAC=184;AF=0.0487417;AFR_AF=0.0179;AMR_AF=0.0687;AN=3775;CS=DEL_pindel;EAS_AF=0.0694;END=124993318;EUR_AF=0.0535;NS=2504;SAS_AF=0.0501;SVTYPE=DEL\tGT\t1\nX\t125077710\tDEL_pindel_54534\tTAGAAATTGAACGTTATTGAACAACTATTATTTTTAAAACACTATGAAGGCCAGAATTTTATGCCAAGGGGTCGGGGGAGGGGGGAGGGATAGCATTGGGAGATATACCTAATGCTAGATGACACATTAGTGGGTGCAGCGCACCAGCATGGCACATGTATACATATGTAACTAACCTGCACAATGTGCACATGTACCCTAAAACTTAGAGTATAATAAAAAAAAAAAAAAAAAAAA\tT\t.\tPASS\tAC=1239;AF=0.328212;AFR_AF=0.3819;AMR_AF=0.2958;AN=3775;CS=DEL_pindel;EAS_AF=0.2984;END=125077946;EUR_AF=0.3003;MEINFO=LINE1,5958,5973,+;NS=2504;SAS_AF=0.3384;SVTYPE=DEL_LINE1\tGT\t1\nX\t125092337\tDUP_gs.X_CNV_X_125092337_125131442\tG\t<CN0>,<CN2>\t.\tPASS\tAC=4,1;AF=0.0010596,0.0002649;AFR_AF=0.003,0;AMR_AF=0,0;AN=3775;CS=DUP_gs;EAS_AF=0,0.0013;END=125131442;EUR_AF=0,0;NS=2504;SAS_AF=0.0014,0;SVTYPE=CNV\tGT\t0\nX\t125092796\tYL_CN_ITU_4750\tA\t<CN0>\t100\tPASS\tAC=12;AF=0.00423841;AFR_AF=0.009;AMR_AF=0.0019;AN=2542;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0;END=125130906;EUR_AF=0.0065;NS=2504;SAS_AF=0.0014;SVTYPE=DEL\tGT\t.\nX\t125101247\tBI_GS_DEL2_B3_P0615_1\tA\t<CN0>\t100\tPASS\tAC=12;AF=0.00423841;AFR_AF=0.009;AMR_AF=0.0019;AN=2542;CIEND=-2,2;CIPOS=-2,2;CS=DEL_union;EAS_AF=0;END=125290547;EUR_AF=0.0078;MC=YL_CN_ESN_4496;NS=2504;SAS_AF=0;SVTYPE=DEL\tGT\t.\nX\t125103522\tDUP_gs.X_CNV_X_125103522_125119972\tA\t<CN0>,<CN2>\t.\tPASS\tAC=6,9;AF=0.0015894,0.00238411;AFR_AF=0.005,0;AMR_AF=0,0;AN=3775;CS=DUP_gs;EAS_AF=0,0.0118;END=125119972;EUR_AF=0,0;NS=2504;SAS_AF=0.0014,0;SVTYPE=CNV\tGT\t0\nX\t125269140\tBI_GS_DEL1_B3_P3023_6\tG\t<CN0>\t100\tPASS\tAC=17;AF=0.0275497;AFR_AF=0.0379;AMR_AF=0.0267;AN=2542;CIEND=-5,6;CIPOS=-5,6;CS=DEL_union;EAS_AF=0.0236;END=125271067;EUR_AF=0.0235;MC=YL_CN_PUR_5736;NS=2504;SAS_AF=0.0223;SVTYPE=DEL\tGT\t.\nX\t125372640\tDEL_pindel_54536\tGAGAGCTGCAGTTGGTAGAATGACCAGCTGCAGAGAGGAGCTATCCTCTCTGCTGAAAGCTGAACACTTGTTCAGACCACCTGCCTGCAGAGAGGATCCACCCTCTCCAAAGCCTCCTCTCTCCTA\tG\t.\tPASS\tAC=176;AF=0.0466225;AFR_AF=0.0459;AMR_AF=0.0573;AN=3775;CS=DEL_pindel;EAS_AF=0.0563;END=125372765;EUR_AF=0.0418;NS=2504;SAS_AF=0.0348;SVTYPE=DEL\tGT\t0\nX\t125392060\tDEL_pindel_54537\tACACTGGCAAGTGCCAAGCTGCTGGCCTCTGTGTGTGCATTTGCACCAGTGGCAGTGGCAGTGTGAAGGGGCAGGGT\tA\t.\tPASS\tAC=394;AF=0.104371;AFR_AF=0.0638;AMR_AF=0.1202;AN=3775;CS=DEL_pindel;EAS_AF=0.1348;END=125392136;EUR_AF=0.1123;NS=2504;SAS_AF=0.1086;SVTYPE=DEL\tGT\t1\nX\t125487116\tL1_umary_LINE1_3127\tA\t<INS:ME:LINE1>\t.\tPASS\tAC=1;AF=0.0002649;AFR_AF=0;AMR_AF=0;AN=3775;CS=L1_umary;EAS_AF=0;EUR_AF=0.0013;MEINFO=LINE1,103,5984,-;NS=2504;SAS_AF=0;SVLEN=5881;SVTYPE=LINE1;TSD=ATCCAAAGCTT\tGT\t0\nX\t125560556\tALU_umary_ALU_12782\tT\t<INS:ME:ALU>\t.\tPASS\tAC=29;AF=0.00768212;AFR_AF=0.0269;AMR_AF=0.0038;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0;MEINFO=AluUndef,1,277,-;NS=2504;SAS_AF=0;SVLEN=276;SVTYPE=ALU;TSD=null\tGT\t0\nX\t125778805\tALU_umary_ALU_12783\tA\t<INS:ME:ALU>\t.\tPASS\tAC=2;AF=0.0005298;AFR_AF=0;AMR_AF=0;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0;MEINFO=AluYc1,2,281,+;NS=2504;SAS_AF=0.0028;SVLEN=279;SVTYPE=ALU;TSD=null\tGT\t0\nX\t125850344\tBI_GS_DEL1_B4_P3023_107\tG\t<CN0>\t100\tPASS\tAC=71;AF=0.0490066;AFR_AF=0.1196;AMR_AF=0.0324;AN=2542;CIEND=0,1;CIPOS=0,1;CS=DEL_union;EAS_AF=0.0183;END=125852884;EUR_AF=0.0248;MC=YL_CN_PUR_5737,UW_VH_8291,YL_CN_GWD_5937,YL_CN_MSL_4096;NS=2504;SAS_AF=0.0209;SVTYPE=DEL\tGT\t.\nX\t125857686\tL1_umary_LINE1_3128\tA\t<INS:ME:LINE1>\t.\tPASS\tAC=30;AF=0.00794702;AFR_AF=0.0219;AMR_AF=0.0057;AN=3775;CS=L1_umary;EAS_AF=0.0039;EUR_AF=0.0026;MEINFO=LINE1,5082,6019,+;NS=2504;SAS_AF=0;SVLEN=937;SVTYPE=LINE1;TSD=null\tGT\t0\nX\t125891662\tBI_GS_DEL1_B2_P3023_348\tT\t<CN0>\t100\tPASS\tAC=6;AF=0.0018543;AFR_AF=0.002;AMR_AF=0;AN=2542;CIEND=-29,30;CIPOS=-29,30;CS=DEL_union;EAS_AF=0;END=125926810;EUR_AF=0.0065;MC=YL_CN_IBS_4145;NS=2504;SAS_AF=0;SVTYPE=DEL\tGT\t.\nX\t125939424\tBI_GS_DEL1_B1_P3023_471\tA\t<CN0>\t100\tPASS\tAC=9;AF=0.00370861;AFR_AF=0.009;AMR_AF=0;AN=2542;CIEND=-4,4;CIPOS=-4,4;CS=DEL_union;EAS_AF=0.0026;END=125944079;EUR_AF=0.0039;NS=2504;SAS_AF=0;SVTYPE=DEL\tGT\t.\nX\t125941756\tBI_GS_DEL1_B5_P3023_612\tC\t<CN0>\t100\tPASS\tAC=110;AF=0.0770861;AFR_AF=0.1575;AMR_AF=0.0534;AN=2542;CIEND=0,1;CIPOS=0,1;CS=DEL_union;EAS_AF=0.0406;END=125943170;EUR_AF=0.0509;MC=UW_VH_8781,EM_DL_DEL101189244;NS=2504;SAS_AF=0.0487;SVTYPE=DEL\tGT\t.\nX\t125960623\tALU_umary_ALU_12784\tA\t<INS:ME:ALU>\t.\tPASS\tAC=125;AF=0.0331126;AFR_AF=0.1216;AMR_AF=0.0057;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0;MEINFO=AluUndef,3,280,-;NS=2504;SAS_AF=0;SVLEN=277;SVTYPE=ALU;TSD=AAAAAACATATTAGTA\tGT\t0\nX\t125987965\tBI_GS_DEL1_B2_P3023_390\tC\t<CN0>\t100\tPASS\tAC=6;AF=0.00344371;AFR_AF=0.003;AMR_AF=0.0038;AN=2542;CIEND=-10,10;CIPOS=-10,10;CS=DEL_union;EAS_AF=0.0026;END=125990921;EUR_AF=0.0078;MC=YL_CN_KHV_5078;NS=2504;SAS_AF=0;SVTYPE=DEL\tGT\t.\nX\t125998504\tYL_CN_FIN_4358\tT\t<CN0>\t100\tPASS\tAC=8;AF=0.00238411;AFR_AF=0.002;AMR_AF=0.0019;AN=2542;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0;END=126118892;EUR_AF=0.0078;MC=BI_GS_DEL2_B1_P0615_1,EM_DL_DEL106934;NS=2504;SAS_AF=0;SVTYPE=DEL\tGT\t.\nX\t126122627\tBI_GS_DEL1_B5_P3024_89\tT\t<CN0>\t100\tPASS\tAC=67;AF=0.104901;AFR_AF=0.1117;AMR_AF=0.0935;AN=2542;CIEND=-1,2;CIPOS=-1,2;CS=DEL_union;EAS_AF=0.0916;END=126123671;EUR_AF=0.1188;NS=2504;SAS_AF=0.1031;SVTYPE=DEL\tGT\t.\nX\t126290693\tALU_umary_ALU_12785\tT\t<INS:ME:ALU>\t.\tPASS\tAC=1761;AF=0.46649;AFR_AF=0.674;AMR_AF=0.4447;AN=3775;CS=ALU_umary;EAS_AF=0.449;EUR_AF=0.2533;MEINFO=AluYc1,99,281,-;NS=2504;SAS_AF=0.4387;SVLEN=182;SVTYPE=ALU;TSD=TTATTTTTACAATTCTT\tGT\t0\nX\t126330194\tUW_VH_8228\tA\t<CN0>\t100\tPASS\tAC=115;AF=0.123179;AFR_AF=0.1396;AMR_AF=0.1126;AN=2542;CIEND=0,317;CIPOS=-273,0;CS=DEL_union;EAS_AF=0.1021;END=126331264;EUR_AF=0.1332;MC=EM_DL_DEL101189336,BI_GS_DEL1_B4_P3024_44;NS=2504;SAS_AF=0.1198;SVTYPE=DEL\tGT\t.\nX\t126581696\tL1_umary_LINE1_3129\tA\t<INS:ME:LINE1>\t.\tPASS\tAC=26;AF=0.00688742;AFR_AF=0;AMR_AF=0.0115;AN=3775;CS=L1_umary;EAS_AF=0;EUR_AF=0.0078;MEINFO=LINE1,4625,5956,+;NS=2504;SAS_AF=0.0195;SVLEN=1331;SVTYPE=LINE1;TSD=null\tGT\t0\nX\t126583432\tALU_umary_ALU_12786\tA\t<INS:ME:ALU>\t.\tPASS\tAC=181;AF=0.047947;AFR_AF=0.0618;AMR_AF=0.0649;AN=3775;CS=ALU_umary;EAS_AF=0.0249;EUR_AF=0.0574;MEINFO=AluUndef,2,281,+;NS=2504;SAS_AF=0.0306;SVLEN=279;SVTYPE=ALU;TSD=AAAATATACTA\tGT\t0\nX\t126597734\tBI_GS_DEL1_B2_P3024_261\tT\t<CN0>\t100\tPASS\tAC=459;AF=0.175629;AFR_AF=0.1456;AMR_AF=0.4141;AN=2542;CIEND=-3,3;CIPOS=-3,3;CS=DEL_union;EAS_AF=0.0196;END=126602382;EUR_AF=0.2533;MC=EM_DL_DEL106941,YL_CN_GIH_3490,UW_VH_12983,UW_VH_2665;NS=2504;SAS_AF=0.1267;SVTYPE=DEL\tGT\t.\nX\t126759390\tBI_GS_DEL2_B2_P0615_1\tG\t<CN0>\t100\tPASS\tAC=11;AF=0.00291391;AFR_AF=0.006;AMR_AF=0.0019;AN=2542;CIEND=-14,15;CIPOS=-14,15;CS=DEL_union;EAS_AF=0;END=126886628;EUR_AF=0.0052;MC=UW_VH_13439,YL_CN_ESN_4501;NS=2504;SAS_AF=0;SVTYPE=DEL\tGT\t.\nX\t126779103\tALU_umary_ALU_12787\tT\t<INS:ME:ALU>\t.\tPASS\tAC=10;AF=0.00264901;AFR_AF=0;AMR_AF=0;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0.0131;MEINFO=AluUndef,19,281,+;NS=2504;SAS_AF=0;SVLEN=262;SVTYPE=ALU;TSD=null\tGT\t0\nX\t126852159\tBI_GS_DEL1_B1_P3024_403\tG\t<CN0>\t100\tPASS\tAC=9;AF=0.00238411;AFR_AF=0.003;AMR_AF=0.0019;AN=2542;CIEND=-14,15;CIPOS=-14,15;CS=DEL_union;EAS_AF=0;END=126947127;EUR_AF=0.0065;MC=YL_CN_GBR_4581;NS=2504;SAS_AF=0;SVTYPE=DEL\tGT\t.\nX\t126852500\tDEL_pindel_54547\tATGTAATTTGTTTTCAAAAACTTTCCCACACACAAAAAAACTTTAGGCTCAG\tA\t.\tPASS\tAC=703;AF=0.186225;AFR_AF=0.1874;AMR_AF=0.1718;AN=3775;CS=DEL_pindel;EAS_AF=0.2094;END=126852551;EUR_AF=0.1749;NS=2504;SAS_AF=0.1825;SVTYPE=DEL\tGT\t1\nX\t126901433\tBI_GS_DEL1_B5_P3024_598\tA\t<CN0>\t100\tPASS\tAC=10;AF=0.00291391;AFR_AF=0.002;AMR_AF=0.0038;AN=2542;CIEND=-34,35;CIPOS=-34,35;CS=DEL_union;EAS_AF=0;END=126909608;EUR_AF=0.0091;MC=UW_VH_23134,YL_CN_PEL_4387;NS=2504;SAS_AF=0;SVTYPE=DEL\tGT\t.\nX\t126945026\tBI_GS_DEL2_B5_P0615_1\tG\t<CN0>\t100\tPASS\tAC=7;AF=0.00211921;AFR_AF=0.003;AMR_AF=0.0019;AN=2542;CIEND=-14,15;CIPOS=-14,15;CS=DEL_union;EAS_AF=0;END=127075666;EUR_AF=0.0052;NS=2504;SAS_AF=0;SVTYPE=DEL\tGT\t.\nX\t127026713\tDEL_pindel_54549\tAAAATTTTCTGCTTTTTTGATACAGGCATTTGTTGCTATAAACTTCCCTCTTAGTATTGCTTTTGTCATAACCCTT\tA\t.\tPASS\tAC=1111;AF=0.294305;AFR_AF=0.2841;AMR_AF=0.292;AN=3775;CS=DEL_pindel;EAS_AF=0.2893;END=127026788;EUR_AF=0.2794;NS=2504;SAS_AF=0.3315;SVTYPE=DEL\tGT\t0\nX\t127115869\tYL_CN_GWD_5941\tC\t<CN0>\t100\tPASS\tAC=9;AF=0.00238411;AFR_AF=0.004;AMR_AF=0;AN=2542;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0;END=127152716;EUR_AF=0.0052;MC=BI_GS_DEL1_B3_P3025_3,EM_DL_DEL106950;NS=2504;SAS_AF=0.0014;SVTYPE=DEL\tGT\t.\nX\t127142095\tYL_CN_CHB_4727\tT\t<CN0>\t100\tPASS\tAC=11;AF=0.00317881;AFR_AF=0.003;AMR_AF=0.0019;AN=2542;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0.0039;END=127241872;EUR_AF=0.0065;MC=BI_GS_DEL1_B4_P3025_18;NS=2504;SAS_AF=0;SVTYPE=DEL\tGT\t.\nX\t127356141\tALU_umary_ALU_12788\tC\t<INS:ME:ALU>\t.\tPASS\tAC=23;AF=0.00609272;AFR_AF=0;AMR_AF=0;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0;MEINFO=AluYc1,1,281,+;NS=2504;SAS_AF=0.032;SVLEN=280;SVTYPE=ALU;TSD=AAAAATTAAGGTAACTCTGC\tGT\t0\nX\t127369849\tYL_CN_CDX_3887\tA\t<CN0>\t100\tPASS\tAC=10;AF=0.00264901;AFR_AF=0.003;AMR_AF=0.0019;AN=2542;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0.0013;END=127511416;EUR_AF=0.0065;MC=BI_GS_DEL2_B1_P0615_2;NS=2504;SAS_AF=0;SVTYPE=DEL\tGT\t.\nX\t127391777\tYL_CN_PUR_5740\tA\t<CN0>\t100\tPASS\tAC=11;AF=0.00291391;AFR_AF=0.003;AMR_AF=0.0038;AN=2542;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0.0013;END=127427976;EUR_AF=0.0065;NS=2504;SAS_AF=0;SVTYPE=DEL\tGT\t.\nX\t127412105\tL1_umary_LINE1_3130\tA\t<INS:ME:LINE1>\t.\tPASS\tAC=1;AF=0.0002649;AFR_AF=0;AMR_AF=0;AN=3775;CS=L1_umary;EAS_AF=0;EUR_AF=0.0013;MEINFO=LINE1,3782,4928,-;NS=2504;SAS_AF=0;SVLEN=1146;SVTYPE=LINE1;TSD=null\tGT\t0\nX\t127415839\tUW_VH_13355\tA\t<CN0>\t100\tPASS\tAC=11;AF=0.00291391;AFR_AF=0.002;AMR_AF=0.0019;AN=2542;CIEND=0,70;CIPOS=-75,0;CS=DEL_union;EAS_AF=0.0052;END=127432267;EUR_AF=0.0052;MC=EM_DL_DEL106957,BI_GS_DEL1_B4_P3025_56,YL_CN_CHB_4728;NS=2504;SAS_AF=0;SVTYPE=DEL\tGT\t.\nX\t127452736\tBI_GS_DEL1_B5_P3025_331\tC\t<CN0>\t100\tPASS\tAC=8;AF=0.00582781;AFR_AF=0.004;AMR_AF=0.0038;AN=2542;CIEND=-20,20;CIPOS=-20,20;CS=DEL_union;EAS_AF=0.0065;END=127456285;EUR_AF=0.0131;NS=2504;SAS_AF=0.0014;SVTYPE=DEL\tGT\t.\nX\t127498484\tDEL_pindel_54556\tCTGGTTAGTGCTGGTCTAAATAGTCCTTCGGTGGGTGTCACCTAGATTCAGCCCCAGTTTCCTTTCTGCTGTGAGGGACTAGCACTAAATTCAATGAAA\tC\t.\tPASS\tAC=136;AF=0.0360265;AFR_AF=0.0279;AMR_AF=0.0305;AN=3775;CS=DEL_pindel;EAS_AF=0.0563;END=127498582;EUR_AF=0.0339;NS=2504;SAS_AF=0.032;SVTYPE=DEL\tGT\t1\nX\t127612684\tALU_umary_ALU_12789\tC\t<INS:ME:ALU>\t.\tPASS\tAC=25;AF=0.00662252;AFR_AF=0.0199;AMR_AF=0.0076;AN=3775;CS=ALU_umary;EAS_AF=0.0013;EUR_AF=0;MEINFO=AluUndef,1,281,+;NS=2504;SAS_AF=0;SVLEN=280;SVTYPE=ALU;TSD=null\tGT\t0\nX\t127705419\tBI_GS_DEL1_B2_P3025_325\tG\t<CN0>\t100\tPASS\tAC=15;AF=0.0368212;AFR_AF=0.0309;AMR_AF=0.0401;AN=2542;CIEND=-19,20;CIPOS=-19,20;CS=DEL_union;EAS_AF=0.0288;END=127706892;EUR_AF=0.0548;NS=2504;SAS_AF=0.032;SVTYPE=DEL\tGT\t.\nX\t127716133\tYL_CN_JPT_4770\tC\t<CN0>\t100\tPASS\tAC=9;AF=0.00238411;AFR_AF=0.002;AMR_AF=0.0019;AN=2542;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0.0013;END=127757765;EUR_AF=0.0065;NS=2504;SAS_AF=0;SVTYPE=DEL\tGT\t.\nX\t127763536\tALU_umary_ALU_12790\tT\t<INS:ME:ALU>\t.\tPASS\tAC=170;AF=0.0450331;AFR_AF=0.0897;AMR_AF=0.0172;AN=3775;CS=ALU_umary;EAS_AF=0.0131;EUR_AF=0.0457;MEINFO=AluUndef,168,281,-;NS=2504;SAS_AF=0.0362;SVLEN=113;SVTYPE=ALU;TSD=null\tGT\t0\nX\t127815549\tUW_VH_10434\tT\t<CN0>\t100\tPASS\tAC=26;AF=0.0566887;AFR_AF=0.0528;AMR_AF=0.0649;AN=2542;CIEND=0,251;CIPOS=-275,0;CS=DEL_union;EAS_AF=0.038;END=127816839;EUR_AF=0.077;MC=BI_GS_DEL1_B2_P3025_377;NS=2504;SAS_AF=0.0543;SVTYPE=DEL\tGT\t.\nX\t127943444\tDEL_pindel_54557\tTTACGGGACCCTTGATCCCTTCAAAATCTCCATATCTTCTTGCTGAGGCCTGAAATCCCTTTATACATGGAAAAACTCATTGTGGAATTAAAAAGCAAA\tT\t.\tPASS\tAC=1062;AF=0.281325;AFR_AF=0.2622;AMR_AF=0.2615;AN=3775;CS=DEL_pindel;EAS_AF=0.2853;END=127943542;EUR_AF=0.282;NS=2504;SAS_AF=0.3175;SVTYPE=DEL\tGT\t1\nX\t128041065\tDEL_pindel_54560\tCCCAAGTTGAATCAAAATGTCACTGCTTCAAGGGTTTGTATGTGAGCCCTACAATCCTGTTCTTGGTT\tC\t.\tPASS\tAC=600;AF=0.15894;AFR_AF=0.1186;AMR_AF=0.1889;AN=3775;CS=DEL_pindel;EAS_AF=0.1636;END=128041132;EUR_AF=0.1697;NS=2504;SAS_AF=0.1769;SVTYPE=DEL\tGT\t1\nX\t128046284\tDEL_pindel_54561\tAAAAAAATATTTTAAAGCTGTCTGTAGCTGCTCATAAATTGAATTTTGTAGCATGTGATTGACTTCCTGCCAAGAACATTTGCTTGTTCCAACTTAGTCTGCTTTATCTAGATACAGT\tA\t.\tPASS\tAC=974;AF=0.258013;AFR_AF=0.2403;AMR_AF=0.2691;AN=3775;CS=DEL_pindel;EAS_AF=0.2474;END=128046401;EUR_AF=0.2559;NS=2504;SAS_AF=0.2883;SVTYPE=DEL\tGT\t1\nX\t128046771\tDUP_gs.X_CNV_X_128046771_128070740\tA\t<CN0>,<CN2>\t.\tPASS\tAC=0,1;AF=0,0.0002649;AFR_AF=0,0;AMR_AF=0,0;AN=3775;CS=DUP_gs;EAS_AF=0,0;END=128070740;EUR_AF=0,0.0013;NS=2504;SAS_AF=0,0;SVTYPE=DUP\tGT\t0\nX\t128216094\tDEL_pindel_54563\tGTGACATCTGGCAACATGACCCTTGAGCAGTAAGGCATTATAAAAACTATGCCTA\tG\t.\tPASS\tAC=810;AF=0.21457;AFR_AF=0.1775;AMR_AF=0.2233;AN=3775;CS=DEL_pindel;EAS_AF=0.2212;END=128216148;EUR_AF=0.2285;NS=2504;SAS_AF=0.2382;SVTYPE=DEL\tGT\t1\nX\t128269800\tALU_umary_ALU_12791\tC\t<INS:ME:ALU>\t.\tPASS\tAC=1;AF=0.0002649;AFR_AF=0;AMR_AF=0.0019;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0;MEINFO=AluUndef,1,233,+;NS=2504;SAS_AF=0;SVLEN=232;SVTYPE=ALU;TSD=null\tGT\t0\nX\t128320396\tBI_GS_DEL1_B1_P3026_212\tA\t<CN0>\t100\tPASS\tAC=7;AF=0.00238411;AFR_AF=0.002;AMR_AF=0;AN=2542;CIEND=-17,18;CIPOS=-17,18;CS=DEL_union;EAS_AF=0;END=128327515;EUR_AF=0.0091;MC=YL_CN_FIN_4360,EM_DL_DEL106971;NS=2504;SAS_AF=0;SVTYPE=DEL\tGT\t.\nX\t128348971\tDEL_pindel_54567\tACATGTTCCAATCCACCTTCTGTGGGTTGTAGTTCCAAAGGCCATTCCATTTTTAAGACCTTTACAC\tA\t.\tPASS\tAC=138;AF=0.0365563;AFR_AF=0.0229;AMR_AF=0.0382;AN=3775;CS=DEL_pindel;EAS_AF=0.0406;END=128349037;EUR_AF=0.0366;NS=2504;SAS_AF=0.0501;SVTYPE=DEL\tGT\t1\nX\t128375466\tUW_VH_10405\tA\t<CN0>\t100\tPASS\tAC=103;AF=0.050596;AFR_AF=0.1167;AMR_AF=0.0324;AN=2542;CIEND=0,214;CIPOS=-174,0;CS=DEL_union;EAS_AF=0.0249;END=128378855;EUR_AF=0.0222;MC=BI_GS_DEL1_B5_P3026_357,YL_CN_GWD_5942;NS=2504;SAS_AF=0.0292;SVTYPE=DEL\tGT\t.\nX\t128379356\tBI_GS_DEL1_B2_P3026_196\tG\t<CN0>\t100\tPASS\tAC=9;AF=0.00582781;AFR_AF=0.006;AMR_AF=0.0095;AN=2542;CIEND=-30,31;CIPOS=-30,31;CS=DEL_union;EAS_AF=0.0013;END=128382898;EUR_AF=0.0065;NS=2504;SAS_AF=0.007;SVTYPE=DEL\tGT\t.\nX\t128499485\tDEL_pindel_54573\tGATATATATATATATATATATATATATATATATATATATATATATATATATATAT\tG\t.\tPASS\tAC=1028;AF=0.272318;AFR_AF=0.2762;AMR_AF=0.2576;AN=3775;CS=DEL_pindel;EAS_AF=0.2749;END=128499539;EUR_AF=0.2441;NS=2504;SAS_AF=0.305;SVTYPE=DEL\tGT\t1\nX\t128500439\tBI_GS_DEL1_B5_P3026_448\tG\t<CN0>\t100\tPASS\tAC=563;AF=0.22543;AFR_AF=0.2931;AMR_AF=0.2576;AN=2542;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.1911;END=128502436;EUR_AF=0.2363;MC=YL_CN_CDX_3889,UW_VH_2641,EM_DL_DEL101189797,YL_CN_MXL_3790;NS=2504;SAS_AF=0.1323;SVTYPE=DEL\tGT\t.\nX\t128661031\tUW_VH_9421\tG\t<CN0>\t100\tPASS\tAC=10;AF=0.00344371;AFR_AF=0.008;AMR_AF=0.0038;AN=2542;CIEND=0,317;CIPOS=-220,0;CS=DEL_union;EAS_AF=0;END=128665656;EUR_AF=0.0039;MC=EM_DL_DEL106977,BI_GS_DEL1_B3_P3026_23,YL_CN_ESN_4504;NS=2504;SAS_AF=0;SVTYPE=DEL\tGT\t.\nX\t128794882\tDEL_pindel_54580\tTCTTTCCTCACTGAACATCAAGAAGCAGTTTCTCGGGAGGCTGAGGCCGGGGAATGGCGTGAACCCAGGAGGCGGAGCTTGCAGTGAGCCGAGATCGCGCCACTGCACTCCAGACTGGGTGACAGAGTGAGACTCTGTCTCCAAAAAAAAAAAAGAAGCAGTTTCTCACTTTTTGGGTCCACCTATCACTTTATTTGAACTTCTAGCACCTAACTCATACTGTCTTGAATTAGGAAGCCATGAAGTACATAGTGGTTAAGCACATGGGTTCTAGAATAAGGCAGCTCTGTCTCTTACTACATAGGTAA\tT\t.\tPASS\tAC=127;AF=0.0336424;AFR_AF=0.016;AMR_AF=0.0324;AN=3775;CS=DEL_pindel;EAS_AF=0.0236;END=128795189;EUR_AF=0.0705;NS=2504;SAS_AF=0.0306;SVTYPE=DEL\tGT\t0\nX\t128927263\tALU_umary_ALU_12792\tC\t<INS:ME:ALU>\t.\tPASS\tAC=1;AF=0.0002649;AFR_AF=0.001;AMR_AF=0;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0;MEIN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S_AF=0.161;END=130271136;EUR_AF=0.0966;NS=2504;SAS_AF=0.1476;SVTYPE=DEL\tGT\t1\nX\t130274755\tDEL_pindel_54590\tTTGATTTAGTTCTGTATTGATTTAGTTCTAGTCTTTCTTCAGTTCTATAGATGAGATTTCACACTTATAAA\tT\t.\tPASS\tAC=839;AF=0.222252;AFR_AF=0.2044;AMR_AF=0.2176;AN=3775;CS=DEL_pindel;EAS_AF=0.2395;END=130274825;EUR_AF=0.2154;NS=2504;SAS_AF=0.2396;SVTYPE=DEL\tGT\t1\nX\t130294764\tBI_GS_DEL1_B1_P3028_188\tG\t<CN0>\t100\tPASS\tAC=8;AF=0.00291391;AFR_AF=0.003;AMR_AF=0;AN=2542;CIEND=-9,10;CIPOS=-9,10;CS=DEL_union;EAS_AF=0.0052;END=130303951;EUR_AF=0.0052;MC=YL_CN_CDX_3890;NS=2504;SAS_AF=0;SVTYPE=DEL\tGT\t.\nX\t130377774\tUW_VH_5635\tA\t<CN0>\t100\tPASS\tAC=207;AF=0.216159;AFR_AF=0.2024;AMR_AF=0.1947;AN=2542;CIEND=0,425;CIPOS=-413,0;CS=DEL_union;EAS_AF=0.2474;END=130378680;EUR_AF=0.1841;MC=BI_GS_DEL1_B2_P3028_202;NS=2504;SAS_AF=0.2521;SVTYPE=DEL\tGT\t.\nX\t130419609\tDUP_gs.X_CNV_X_130419609_130499134\tA\t<CN0>,<CN2>\t.\tPASS\tAC=0,1;AF=0,0.0002649;AFR_AF=0,0;AMR_AF=0,0;AN=3775;CS=DUP_gs;EAS_AF=0,0.0013;END=130499134;EUR_AF=0,0;NS=2504;SAS_AF=0,0;SVTYPE=DUP\tGT\t0\nX\t130489210\tDUP_gs.X_CNV_X_130489210_130572918\tC\t<CN0>,<CN2>\t.\tPASS\tAC=2,2;AF=0.0005298,0.0005298;AFR_AF=0,0;AMR_AF=0,0;AN=3775;CS=DUP_gs;EAS_AF=0,0.0026;END=130572918;EUR_AF=0,0;NS=2504;SAS_AF=0.0028,0;SVTYPE=CNV\tGT\t0\nX\t130529213\tUW_VH_5983\tG\t<CN0>\t100\tPASS\tAC=19;AF=0.0384106;AFR_AF=0.0349;AMR_AF=0.0363;AN=2542;CIEND=0,334;CIPOS=-390,0;CS=DEL_union;EAS_AF=0.0419;END=130530823;EUR_AF=0.047;NS=2504;SAS_AF=0.032;SVTYPE=DEL\tGT\t.\nX\t130540495\tL1_umary_LINE1_3135\tA\t<INS:ME:LINE1>\t.\tPASS\tAC=2;AF=0.0005298;AFR_AF=0;AMR_AF=0;AN=3775;CS=L1_umary;EAS_AF=0;EUR_AF=0;MEINFO=LINE1,5286,5610,-;NS=2504;SAS_AF=0.0028;SVLEN=324;SVTYPE=LINE1;TSD=null\tGT\t0\nX\t130546244\tUW_VH_10633\tC\t<CN0>\t100\tPASS\tAC=7;AF=0.0206622;AFR_AF=0.014;AMR_AF=0.0229;AN=2542;CIEND=0,219;CIPOS=-214,0;CS=DEL_union;EAS_AF=0.0223;END=130547839;EUR_AF=0.03;MC=BI_GS_DEL1_B1_P3028_367;NS=2504;SAS_AF=0.0167;SVTYPE=DEL\tGT\t.\nX\t130760146\tDUP_gs.X_CNV_X_130760146_130811378\tT\t<CN0>,<CN2>\t.\tPASS\tAC=0,3;AF=0,0.0007947;AFR_AF=0,0;AMR_AF=0,0;AN=3775;CS=DUP_gs;EAS_AF=0,0.0026;END=130811378;EUR_AF=0,0;NS=2504;SAS_AF=0,0.0014;SVTYPE=DUP\tGT\t0\nX\t130778548\tBI_GS_DEL1_B4_P3028_120\tT\t<CN0>\t100\tPASS\tAC=10;AF=0.00370861;AFR_AF=0.003;AMR_AF=0.0019;AN=2542;CIEND=-7,7;CIPOS=-7,7;CS=DEL_union;EAS_AF=0.0079;END=130793457;EUR_AF=0.0052;MC=YL_CN_CHS_4785;NS=2504;SAS_AF=0;SVTYPE=DEL\tGT\t.\nX\t130789467\tDUP_gs.X_CNV_X_130789467_130847286\tT\t<CN0>,<CN2>\t.\tPASS\tAC=0,1;AF=0,0.0002649;AFR_AF=0,0;AMR_AF=0,0;AN=3775;CS=DUP_gs;EAS_AF=0,0.0013;END=130847286;EUR_AF=0,0;NS=2504;SAS_AF=0,0;SVTYPE=DUP\tGT\t0\nX\t130838070\tBI_GS_DEL1_B3_P3028_31\tG\t<CN0>\t100\tPASS\tAC=21;AF=0.0296689;AFR_AF=0.0309;AMR_AF=0.0305;AN=2542;CIEND=-15,15;CIPOS=-15,15;CS=DEL_union;EAS_AF=0.0406;END=130839578;EUR_AF=0.0352;NS=2504;SAS_AF=0.0097;SVTYPE=DEL\tGT\t.\nX\t130838636\tDUP_gs.X_CNV_X_130838636_130868183\tG\t<CN0>,<CN2>\t.\tPASS\tAC=0,3;AF=0,0.0007947;AFR_AF=0,0;AMR_AF=0,0.0038;AN=3775;CS=DUP_gs;EAS_AF=0,0.0013;END=130868183;EUR_AF=0,0;NS=2504;SAS_AF=0,0;SVTYPE=DUP\tGT\t0\nX\t130921955\tALU_umary_ALU_12794\tT\t<INS:ME:ALU>\t.\tPASS\tAC=1236;AF=0.327417;AFR_AF=0.1964;AMR_AF=0.2328;AN=3775;CS=ALU_umary;EAS_AF=0.5092;EUR_AF=0.2859;MEINFO=AluYa5,1,281,-;NS=2504;SAS_AF=0.4304;SVLEN=280;SVTYPE=ALU;TSD=GTCACATTTTCTT\tGT\t0\nX\t131005357\tUW_VH_2807\tA\t<CN0>\t100\tPASS\tAC=703;AF=0.282384;AFR_AF=0.1825;AMR_AF=0.2214;AN=2542;CIEND=0,191;CIPOS=-257,0;CS=DEL_union;EAS_AF=0.5026;END=131008631;EUR_AF=0.2533;MC=YL_CN_CHS_4786,YL_CN_MXL_3791,BI_GS_DEL1_B3_P3029_2,EM_DL_DEL107027;NS=2504;SAS_AF=0.2632;SVTYPE=DEL\tGT\t.\nX\t131089382\tBI_GS_DEL1_B5_P3029_82\tG\t<CN0>\t100\tPASS\tAC=951;AF=0.517351;AFR_AF=0.4526;AMR_AF=0.4599;AN=2542;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.6309;END=131089611;EUR_AF=0.4974;MC=UW_VH_1939;NS=2504;SAS_AF=0.5501;SVTYPE=DEL\tGT\t.\nX\t131138014\tDEL_pindel_54605\tGTCTCCATCTCTTGACCTAGCTTGTTGTAAAAAAGTTATATAAAAGCTGTGAAAATAATCTAAAGCACAATATAGATGTAGTAGAT\tG\t.\tPASS\tAC=667;AF=0.176689;AFR_AF=0.1864;AMR_AF=0.1546;AN=3775;CS=DEL_pindel;EAS_AF=0.2094;END=131138099;EUR_AF=0.1358;NS=2504;SAS_AF=0.188;SVTYPE=DEL\tGT\t1\nX\t131303138\tDUP_gs.X_CNV_X_131303138_131444024\tA\t<CN0>,<CN2>\t.\tPASS\tAC=0,1;AF=0,0.0002649;AFR_AF=0,0;AMR_AF=0,0;AN=3775;CS=DUP_gs;EAS_AF=0,0;END=131444024;EUR_AF=0,0.0013;NS=2504;SAS_AF=0,0;SVTYPE=DUP\tGT\t0\nX\t131473061\tDEL_pindel_54608\tGGGTATATACCCAGTAATGGGATGGCTGGGTCAAATGGTATTTCTAGTTCTAGATCCCTGAGGAATCGCCACACTGACTTCCACAATGGTTGAACTAGTTTACAGTCCCACCAACAGTGTAAAAGTGTTCCTATTTCTCCACATCCTCTCCAGCACCTGTTGTTTCCTGACTTTTTAATGATCACCATTCTAATTGGTGTGAGATGGTATCTCATTGT\tG\t.\tPASS\tAC=1022;AF=0.270728;AFR_AF=0.2702;AMR_AF=0.2595;AN=3775;CS=DEL_pindel;EAS_AF=0.2579;END=131473278;EUR_AF=0.2768;NS=2504;SAS_AF=0.2869;SVTYPE=DEL\tGT\t1\nX\t131509268\tDEL_pindel_54609\tTTGCCAAAGCAACAACTAAATATAATTAGATAACAATTATTATTTGTATATAAAGTTAAATTTGTTCTTAAATTGTGAACTGTAAAGGATAGTTTTGGACTATAATCTGTATCTTGTCATACTTCAGTGTCAGTTCAGAACCTAGCTAGGCGGGCAGAATCCATGCAGTAAAAGCTTAAACTTTCTTTAACTTTCCTTTGAAATTAAATTGATTAGTTACTTAGAGCTACAAAAAAGCAATAAAATGAAACCTTAAAGATGAACAATAAGAAAAATGAAAATATGGTACCAATTAGTGAGTTATATTTACAGTTTGATTAGGCTAGTAACTAAATTTACAAAAAAAGTTGTTA\tT\t.\tPASS\tAC=1007;AF=0.266755;AFR_AF=0.2562;AMR_AF=0.2634;AN=3775;CS=DEL_pindel;EAS_AF=0.2749;END=131509620;EUR_AF=0.2611;NS=2504;SAS_AF=0.2813;SVTYPE=DEL\tGT\t1\nX\t131694553\tBI_GS_DEL1_B2_P3029_350\tG\t<CN0>\t100\tPASS\tAC=66;AF=0.159735;AFR_AF=0.1725;AMR_AF=0.166;AN=2542;CIEND=-2,2;CIPOS=-2,2;CS=DEL_union;EAS_AF=0.1414;END=131695226;EUR_AF=0.1606;NS=2504;SAS_AF=0.156;SVTYPE=DEL\tGT\t.\nX\t131695169\tL1_umary_LINE1_3136\tC\t<INS:ME:LINE1>\t.\tPASS\tAC=1;AF=0.0002649;AFR_AF=0;AMR_AF=0;AN=3775;CS=L1_umary;EAS_AF=0.0013;EUR_AF=0;MEINFO=LINE1,2235,5735,-;NS=2504;SAS_AF=0;SVLEN=3500;SVTYPE=LINE1;TSD=null\tGT\t0\nX\t131715059\tBI_GS_DEL1_B2_P3029_355\tT\t<CN0>\t100\tPASS\tAC=170;AF=0.253775;AFR_AF=0.2592;AMR_AF=0.2653;AN=2542;CIEND=-66,67;CIPOS=-66,67;CS=DEL_union;EAS_AF=0.233;END=131715696;EUR_AF=0.235;NS=2504;SAS_AF=0.2799;SVTYPE=DEL\tGT\t.\nX\t131744890\tUW_VH_7545\tG\t<CN0>\t100\tPASS\tAC=258;AF=0.282914;AFR_AF=0.2473;AMR_AF=0.3721;AN=2542;CIEND=0,326;CIPOS=-442,0;CS=DEL_union;EAS_AF=0.2749;END=131745334;EUR_AF=0.252;MC=BI_GS_DEL1_B1_P3029_479;NS=2504;SAS_AF=0.3092;SVTYPE=DEL\tGT\t.\nX\t131905529\tDUP_gs.X_CNV_X_131905529_131911902\tA\t<CN0>,<CN2>\t.\tPASS\tAC=0,1;AF=0,0.0002649;AFR_AF=0,0;AMR_AF=0,0.0019;AN=3775;CS=DUP_gs;EAS_AF=0,0;END=131911902;EUR_AF=0,0;NS=2504;SAS_AF=0,0;SVTYPE=DUP\tGT\t0\nX\t131913728\tUW_VH_10260\tA\t<CN0>\t100\tPASS\tAC=148;AF=0.202119;AFR_AF=0.2064;AMR_AF=0.2004;AN=2542;CIEND=0,274;CIPOS=-291,0;CS=DEL_union;EAS_AF=0.1414;END=131914343;EUR_AF=0.2454;MC=BI_GS_DEL1_B5_P3029_807;NS=2504;SAS_AF=0.2159;SVTYPE=DEL\tGT\t.\nX\t131920802\tBI_GS_DEL1_B3_P3029_38\tA\t<CN0>\t100\tPASS\tAC=8;AF=0.00238411;AFR_AF=0.002;AMR_AF=0;AN=2542;CIEND=-23,23;CIPOS=-23,23;CS=DEL_union;EAS_AF=0;END=131927249;EUR_AF=0.0065;MC=YL_CN_BEB_3748;NS=2504;SAS_AF=0.0028;SVTYPE=DEL\tGT\t.\nX\t131939439\tUW_VH_1661\tA\t<CN0>\t100\tPASS\tAC=49;AF=0.0227815;AFR_AF=0.012;AMR_AF=0.0248;AN=2542;CIEND=0,352;CIPOS=-368,0;CS=DEL_union;EAS_AF=0.0013;END=131941566;EUR_AF=0.0731;MC=YL_CN_ACB_5152,YL_CN_CEU_5494,BI_GS_DEL1_B4_P3029_162;NS=2504;SAS_AF=0.0056;SVTYPE=DEL\tGT\t.\nX\t131951321\tBI_GS_DEL1_B5_P3029_846\tG\t<CN0>\t100\tPASS\tAC=9;AF=0.00238411;AFR_AF=0.003;AMR_AF=0.0019;AN=2542;CIEND=-1,1;CIPOS=-1,1;CS=DEL_union;EAS_AF=0;END=131958840;EUR_AF=0.0052;MC=UW_VH_25364;NS=2504;SAS_AF=0.0014;SVTYPE=DEL\tGT\t.\nX\t132221059\tL1_umary_LINE1_3137\tT\t<INS:ME:LINE1>\t.\tPASS\tAC=1;AF=0.0002649;AFR_AF=0.001;AMR_AF=0;AN=3775;CS=L1_umary;EAS_AF=0;EUR_AF=0;MEINFO=LINE1,3029,3914,-;NS=2504;SAS_AF=0;SVLEN=885;SVTYPE=LINE1;TSD=null\tGT\t0\nX\t132537103\tDEL_pindel_54617\tAGAGCACCACGCTCTAGGTTAAGGGGTAAAAAAACATGTTTTCCTTTTCCTTTCCTTACTTAGGCATCTAGGACTGAATGTATGCAAAAGTTAAAAATAAATGAGATAGCTTAAAATAATTAGATTTAAAAAGGGTTATCTTAGCCTGTTTGGGCTGCTAAAACAAAATACCAAAGATTGGGTGGCTTCTAAACAACAGAAATTTATTGCTTGCAGTTCTGGAGGCCAGGAAGTCCAAGATCAAGATGCTGGTAGATTGGGTTCTGGTAAGGGCATGCTTCCTCATAGAGGGCCATCTTCTCACCGTAATTTCATGTGGCGCAAGTGTTAACGGTTTTCTCTGGGGCCTCTTTTATAAGGGCACTAATCACATTCATGAGGGTTTACCTCCCAGAGACTCCACCTCCTAATACCATCACCTTGAGGGTTAGGATTTCAACATATGAATTTTAGAAGAATAGAGTAAGAGCACAGCAGATATGAATAAAAATATCTCGTCCTGGAATGAGTACAGAAACAAAAAGTCATGCTTAACGTTCCTGAGCACCTACCACATGCCATGCAGTATGTTAGGAACTGGGGATACATGGTTTCTCAGATCTGGCATGATAGGGCACATAGAGCTGCCTTTTTTTTTTTTTGACAGAGTCTCACTCTGTCGCCCAAGCTGGGGTGTAGTGGTGTGATCTTGGCTTGCTGCAATCTCTGCCTCCCAAGTTCAAACAATCCTTGTGCCTCAGCCTCCCGAGTAGCTGGGATTACAGGTGCATACCACCACACCCCAGCTAATTTTTGTGTTTTTAGTC\tA\t.\tPASS\tAC=289;AF=0.0765563;AFR_AF=0.0279;AMR_AF=0.1202;AN=3775;CS=DEL_pindel;EAS_AF=0.0628;END=132537908;EUR_AF=0.1214;NS=2504;SAS_AF=0.0794;SVTYPE=DEL\tGT\t0\nX\t132658201\tBI_GS_DEL1_B3_P3030_17\tA\t<CN0>\t100\tPASS\tAC=12;AF=0.00370861;AFR_AF=0.002;AMR_AF=0;AN=2542;CIEND=-34,35;CIPOS=-34,35;CS=DEL_union;EAS_AF=0.0026;END=132663275;EUR_AF=0.0065;MC=UW_VH_13632;NS=2504;SAS_AF=0.007;SVTYPE=DEL\tGT\t.\nX\t132769210\tDEL_pindel_54625\tGTAAACTCCTTGCTCTGTAGAAATTAGTCATTTCTAAGGTATACTAACTCTTTTACCTATGCAAAATACTTTTATCCAACAACACGAAAATGACAAGAAAGTGAAAATGGACCAGAAGGAGAGCACTTATTTGAGTTATGCTGTGAGGCCTGGAGGTCTCTGGGACACAGCCAAGGCCAGTAGCAGTTTAAAAGAGTGACAACTTAAAGCACCTCCATCTACAGTAGAAAGCAATCATGTGACAAAGTAGGGAAGTCTATTTTAGAAATGT\tG\t.\tPASS\tAC=1167;AF=0.309139;AFR_AF=0.3001;AMR_AF=0.3034;AN=3775;CS=DEL_pindel;EAS_AF=0.3128;END=132769480;EUR_AF=0.2924;NS=2504;SAS_AF=0.3398;SVTYPE=DEL\tGT\t1\nX\t133004651\tALU_umary_ALU_12795\tT\t<INS:ME:ALU>\t.\tPASS\tAC=25;AF=0.00662252;AFR_AF=0.0219;AMR_AF=0.0057;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0;MEINFO=AluYb11,1,260,-;NS=2504;SAS_AF=0;SVLEN=259;SVTYPE=ALU;TSD=TAAAATGAGGATCTT\tGT\t0\nX\t133086929\tL1_umary_LINE1_3138\tT\t<INS:ME:LINE1>\t.\tPASS\tAC=10;AF=0.00264901;AFR_AF=0;AMR_AF=0;AN=3775;CS=L1_umary;EAS_AF=0;EUR_AF=0;MEINFO=LINE1,5225,5890,+;NS=2504;SAS_AF=0.0139;SVLEN=665;SVTYPE=LINE1;TSD=null\tGT\t0\nX\t133295126\tBI_GS_DEL1_B5_P3031_240\tG\t<CN0>\t100\tPASS\tAC=10;AF=0.00397351;AFR_AF=0.007;AMR_AF=0.0019;AN=2542;CIEND=-2,3;CIPOS=-2,3;CS=DEL_union;EAS_AF=0;END=133298458;EUR_AF=0.0091;MC=EM_DL_DEL107144;NS=2504;SAS_AF=0;SVTYPE=DEL\tGT\t.\nX\t133347721\tBI_GS_DEL1_B4_P3031_49\tG\t<CN0>\t100\tPASS\tAC=20;AF=0.00900662;AFR_AF=0.003;AMR_AF=0.0038;AN=2542;CIEND=0,1;CIPOS=0,1;CS=DEL_union;EAS_AF=0.0026;END=133352266;EUR_AF=0.0339;MC=YL_CN_GBR_4585,UW_VH_2434;NS=2504;SAS_AF=0.0014;SVTYPE=DEL\tGT\t.\nX\t133347752\tDUP_gs.X_CNV_X_133347752_133352160\tA\t<CN0>,<CN2>\t.\tPASS\tAC=25,3;AF=0.00662252,0.0007947;AFR_AF=0.001,0;AMR_AF=0.0057,0.0019;AN=3775;CS=DUP_gs;EAS_AF=0,0.0013;END=133352160;EUR_AF=0.0274,0.0013;NS=2504;SAS_AF=0,0;SVTYPE=CNV\tGT\t0\nX\t133367997\tDEL_pindel_54629\tAGAGTGAGACCCCGTCGCAAAAAAAAAAAAAATATATATATATATAATTATATATATATATAATATTATATATATATATACACATACTTATAAATGTATATGTTTTCATTGCCCCAAATAGCCCAGGTTTGAGGCTACTGAAACTAGGATCATTTTCCAGGGCAATCAAAAGTAGCCTATTTTGCTGCATGATCCAAGAAAAAAATCACATTACTTCTCTGAGTCTCAGTCTCCCAC\tA\t.\tPASS\tAC=950;AF=0.251656;AFR_AF=0.2393;AMR_AF=0.2328;AN=3775;CS=DEL_pindel;EAS_AF=0.2513;END=133368233;EUR_AF=0.2507;NS=2504;SAS_AF=0.2841;SVTYPE=DEL\tGT\t1\nX\t133394234\tBI_GS_DEL1_B2_P3031_181\tA\t<CN0>\t100\tPASS\tAC=40;AF=0.0148344;AFR_AF=0.0459;AMR_AF=0.0019;AN=2542;CIEND=0,1;CIPOS=0,1;CS=DEL_union;EAS_AF=0.0026;END=133397211;EUR_AF=0.0052;MC=UW_VH_12659,YL_CN_GWD_5947;NS=2504;SAS_AF=0.0042;SVTYPE=DEL\tGT\t.\nX\t133520874\tBI_GS_DEL1_B1_P3031_322\tC\t<CN0>\t100\tPASS\tAC=7;AF=0.00609272;AFR_AF=0.002;AMR_AF=0.0057;AN=2542;CIEND=-24,25;CIPOS=-24,25;CS=DEL_union;EAS_AF=0.0026;END=133523028;EUR_AF=0.0183;NS=2504;SAS_AF=0.0028;SVTYPE=DEL\tGT\t.\nX\t133669226\tDEL_pindel_54633\tGCCGGGCGTGGTGGCTCATCCTTGCACTTTGGGAGGCCGAGGTGGGTGGATCACCTGAGGTCCGGAGTTTGAGA\tG\t.\tPASS\tAC=1044;AF=0.276556;AFR_AF=0.2592;AMR_AF=0.2901;AN=3775;CS=DEL_pindel;EAS_AF=0.2631;END=133669299;EUR_AF=0.2676;NS=2504;SAS_AF=0.3148;SVTYPE=DEL\tGT\t1\nX\t133864428\tBI_GS_DEL1_B3_P3031_21\tA\t<CN0>\t100\tPASS\tAC=12;AF=0.0370861;AFR_AF=0.0339;AMR_AF=0.0382;AN=2542;CIEND=-20,21;CIPOS=-20,21;CS=DEL_union;EAS_AF=0.0249;END=133865788;EUR_AF=0.0496;NS=2504;SAS_AF=0.0404;SVTYPE=DEL\tGT\t.\nX\t134006110\tALU_umary_ALU_12796\tA\t<INS:ME:ALU>\t.\tPASS\tAC=1;AF=0.0002649;AFR_AF=0;AMR_AF=0;AN=3775;CS=ALU_umary;EAS_AF=0.0013;EUR_AF=0;MEINFO=AluUndef,15,281,+;NS=2504;SAS_AF=0;SVLEN=266;SVTYPE=ALU;TSD=null\tGT\t0\nX\t134161502\tDEL_pindel_54641\tTTAAAACCACAGTGAGTAGTGCCGCAATAAACATACGTGTGCATGTGTCTTTATAGCAGCATGATTTATAGTCCTTTGGGTATATACCGGCACTATTCACAATAGCAAAGACTTGGAACCAACCCAAATGTCCAACAATGATAGACTGGATTAAGCAAATGTGGCACATATACACCATGGAATACTATGCAGCCATAAAAAATGATGAGTTCATGTCCTTTGTAGGGACATGGATGAAATTGGAAACCATCATTCTCAGTAAACTATCGCAAGAACAAAAAACCAAACACCGCATATTCTCACTCATAGGTGGGAATTGAACAATGAGATCACATGGACACAGGAAGGGGAATATCACACTCTGGGGACTGTGGTGGGGTCGGGGGAGGGGGGAGGGATAGCATTGGGAGATATACCTAATGCTAGATGACACGTTAGTGGGTGCAGCCCACCAGCATGGCACATGTATACATATGTAACTAACCTGCACAATGTGCACATGTACCCTAAAACTTAGAGTATAATAAAAAAAAAAAAAATAAAAAAAAAAAA\tT\t.\tPASS\tAC=1831;AF=0.485033;AFR_AF=0.5244;AMR_AF=0.5038;AN=3775;CS=DEL_pindel;EAS_AF=0.4463;END=134162053;EUR_AF=0.5261;MEINFO=LINE1,5521,5597,+;NS=2504;SAS_AF=0.4136;SVTYPE=DEL_LINE1\tGT\t1\nX\t134234489\tDUP_gs.X_CNV_X_134234489_134323535\tA\t<CN0>,<CN2>\t.\tPASS\tAC=0,5;AF=0,0.0013245;AFR_AF=0,0;AMR_AF=0,0;AN=3775;CS=DUP_gs;EAS_AF=0,0.0039;END=134323535;EUR_AF=0,0.0013;NS=2504;SAS_AF=0,0.0014;SVTYPE=DUP\tGT\t0\nX\t134296467\tDUP_gs.X_CNV_X_134296467_134343085\tA\t<CN0>,<CN2>\t.\tPASS\tAC=0,4;AF=0,0.0010596;AFR_AF=0,0;AMR_AF=0,0;AN=3775;CS=DUP_gs;EAS_AF=0,0.0026;END=134343085;EUR_AF=0,0.0013;NS=2504;SAS_AF=0,0.0014;SVTYPE=DUP\tGT\t0\nX\t134309593\tDEL_pindel_54643\tTGGTTCGGAAGACGTTAGATCCCAGCTCAACTCAGCTGTTTCCTGGCTTTGCAACCTGTCCTCAGGGTCTGACACAGCAGCAACTTGTAAGTAAAATCAGCCAATAAATTGAGTTTTCTTGCAGATCAGTGATCCAGCCTCCCTCGTGCACATGAGTTGCACCATGGAGTAAAATGTTACTCCTTTCATTACAAAAGCTACACTGGAAATAAGTGTTGGACTAGTGTTTAGACAAATATTTCTATAAGAATAGAGTGACAAGGCTTTAAATGACATGTATCAATAAGTATATTATTCATTATGATTTAATGGATAGGGACAATTCCCATCGATGGGAATTTTGGTTTCCTCATGTGATGGGAGTTTTTCCAATTCATATCTTTGTTTTTCAAAACACAATAAGTGTTTGGATTGCTTTTATTTGTTACAGAATGTCAATGTCAGCTCTCCGTTGTCTTAGCTTTGTCGGCTATAACAATATACCACAGACATTTATATTGCACAGTTCTGGACGCTGGCAGGTCCAAGAATAAGGTGCTGACTGATTCGGTTCGGGGCAAGGGCCCTCTTTCTGGCTCAAAGATTGTCAAATTCTGGCTGTTTCCTCCCATGGAGGAGTGGGAGCAAACAGTGGCTTCTCTTCCTCTTCTTCTAAGGATACTAATTCCATTATGGAGCTCTACTCTCATGATCCCATCTAAGCCTAATAGCATCCCAAAGGCCCCATCTCCATATAGATCACATTGGGGATTACAGCTTCAACAAAGGAATTTTAGGGGAACACAGATGTTCAGTGCCCCTAACCACTGTGAGGTATGTTCATTATACTATCAAAATAACTTGTACCTTTTGTTTCCTTTCTTTTTCTTTCTTTGTCTTTTTTCTTTTTTCTTTTTTTAGGTGGAGTCTCCCTCTGTCGCCCAGGCTTGACTGCATTGGCATGATCTTGGCTCACTGCAACCTCAGCCTCCTG\tT\t.\tPASS\tAC=666;AF=0.176424;AFR_AF=0.1306;AMR_AF=0.1813;AN=3775;CS=DEL_pindel;EAS_AF=0.2055;END=134310565;EUR_AF=0.171;NS=2504;SAS_AF=0.2117;SVTYPE=DEL\tGT\t1\nX\t134329722\tDUP_gs.X_CNV_X_134329722_134507064\tA\t<CN0>,<CN2>\t.\tPASS\tAC=0,2;AF=0,0.0005298;AFR_AF=0,0;AMR_AF=0,0;AN=3775;CS=DUP_gs;EAS_AF=0,0.0026;END=134507064;EUR_AF=0,0;NS=2504;SAS_AF=0,0;SVTYPE=DUP\tGT\t0\nX\t134390717\tDUP_gs.X_CNV_X_134390717_134438346\tT\t<CN0>,<CN2>\t.\tPASS\tAC=2,3;AF=0.0005298,0.0007947;AFR_AF=0.002,0;AMR_AF=0,0.0019;AN=3775;CS=DUP_gs;EAS_AF=0,0.0026;END=134438346;EUR_AF=0,0;NS=2504;SAS_AF=0,0;SVTYPE=CNV\tGT\t0\nX\t134450378\tBI_GS_DEL1_B3_P3032_13\tA\t<CN0>\t100\tPASS\tAC=4;AF=0.00317881;AFR_AF=0.003;AMR_AF=0.0038;AN=2542;CIEND=-12,13;CIPOS=-12,13;CS=DEL_union;EAS_AF=0.0013;END=134453504;EUR_AF=0.0052;MC=YL_CN_MSL_4102;NS=2504;SAS_AF=0.0028;SVTYPE=DEL\tGT\t.\nX\t134512154\tDUP_gs.X_CNV_X_134512154_134566069\tA\t<CN0>,<CN2>\t.\tPASS\tAC=0,2;AF=0,0.0005298;AFR_AF=0,0;AMR_AF=0,0;AN=3775;CS=DUP_gs;EAS_AF=0,0.0026;END=134566069;EUR_AF=0,0;NS=2504;SAS_AF=0,0;SVTYPE=DUP\tGT\t0\nX\t134519685\tUW_VH_7009\tC\t<CN0>\t100\tPASS\tAC=87;AF=0.102517;AFR_AF=0.1505;AMR_AF=0.1031;AN=2542;CIEND=0,311;CIPOS=-322,0;CS=DEL_union;EAS_AF=0.0877;END=134522284;EUR_AF=0.077;MC=BI_GS_DEL1_B2_P3032_225,YL_CN_GWD_5948;NS=2504;SAS_AF=0.078;SVTYPE=DEL\tGT\t.\nX\t134532108\tUW_VH_6752\tT\t<CN0>\t100\tPASS\tAC=7;AF=0.00211921;AFR_AF=0.002;AMR_AF=0.0019;AN=2542;CIEND=0,182;CIPOS=-199,0;CS=DEL_union;EAS_AF=0.0013;END=134535566;EUR_AF=0.0052;NS=2504;SAS_AF=0;SVTYPE=DEL\tGT\t.\nX\t134641990\tBI_GS_DEL1_B3_P3032_27\tC\t<CN0>\t100\tPASS\tAC=6;AF=0.0018543;AFR_AF=0.002;AMR_AF=0;AN=2542;CIEND=-44,44;CIPOS=-44,44;CS=DEL_union;EAS_AF=0;END=134648586;EUR_AF=0.0052;MC=YL_CN_PJL_5108;NS=2504;SAS_AF=0.0014;SVTYPE=DEL\tGT\t.\nX\t134652695\tDUP_gs.X_CNV_X_134652695_134790974\tT\t<CN0>,<CN2>\t.\tPASS\tAC=0,5;AF=0,0.0013245;AFR_AF=0,0.001;AMR_AF=0,0;AN=3775;CS=DUP_gs;EAS_AF=0,0.0013;END=134790974;EUR_AF=0,0.0013;NS=2504;SAS_AF=0,0.0028;SVTYPE=DUP\tGT\t0\nX\t134748495\tDUP_gs.X_CNV_X_134748495_134791065\tG\t<CN0>,<CN2>\t.\tPASS\tAC=0,46;AF=0,0.0121854;AFR_AF=0,0.008;AMR_AF=0,0.0076;AN=3775;CS=DUP_gs;EAS_AF=0,0.0065;END=134791065;EUR_AF=0,0.0091;NS=2504;SAS_AF=0,0.0306;SVTYPE=DUP\tGT\t0\nX\t134756231\tYL_CN_GBR_4588\tA\t<CN0>\t100\tPASS\tAC=6;AF=0.0015894;AFR_AF=0.002;AMR_AF=0;AN=2542;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0;END=134773985;EUR_AF=0.0052;NS=2504;SAS_AF=0;SVTYPE=DEL\tGT\t.\nX\t134776925\tALU_umary_ALU_12797\tA\t<INS:ME:ALU>\t.\tPASS\tAC=3;AF=0.0007947;AFR_AF=0.003;AMR_AF=0;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0;MEINFO=AluYa4_5,1,281,-;NS=2504;SAS_AF=0;SVLEN=280;SVTYPE=ALU;TSD=null\tGT\t0\nX\t134810690\tDUP_gs.X_CNV_X_134810690_134828847\tT\t<CN0>,<CN2>\t.\tPASS\tAC=0,39;AF=0,0.0103311;AFR_AF=0,0.012;AMR_AF=0,0.0076;AN=3775;CS=DUP_gs;EAS_AF=0,0.0092;END=134828847;EUR_AF=0,0.0026;NS=2504;SAS_AF=0,0.0195;SVTYPE=DUP\tGT\t0\nX\t134813415\tDEL_pindel_54644\tGGACAGAGGCAGAGAGAGCCAGGAGGAAATGGATGGGACCCGCGTTAGGAGAGGGT\tG\t.\tPASS\tAC=998;AF=0.264371;AFR_AF=0.2562;AMR_AF=0.271;AN=3775;CS=DEL_pindel;EAS_AF=0.2513;END=134813470;EUR_AF=0.2572;NS=2504;SAS_AF=0.2925;SVTYPE=DEL\tGT\t1\nX\t134815179\tDUP_gs.X_CNV_X_134815179_134851699\tG\t<CN0>,<CN2>\t.\tPASS\tAC=0,39;AF=0,0.0103311;AFR_AF=0,0.011;AMR_AF=0,0.0076;AN=3775;CS=DUP_gs;EAS_AF=0,0.0092;END=134851699;EUR_AF=0,0.0026;MC=DUP_gs.X_CNV_X_134803341_134848744;NS=2504;SAS_AF=0,0.0209;SVTYPE=DUP\tGT\t0\nX\t134891974\tDUP_gs.X_CNV_X_134891974_134910593\tA\t<CN0>,<CN2>\t.\tPASS\tAC=0,22;AF=0,0.00582781;AFR_AF=0,0.007;AMR_AF=0,0.0038;AN=3775;CS=DUP_gs;EAS_AF=0,0.0039;END=134910593;EUR_AF=0,0.0013;NS=2504;SAS_AF=0,0.0125;SVTYPE=DUP\tGT\t0\nX\t134903435\tDUP_gs.X_CNV_X_134903435_134948570\tT\t<CN0>,<CN2>\t.\tPASS\tAC=0,20;AF=0,0.00529801;AFR_AF=0,0.007;AMR_AF=0,0.0038;AN=3775;CS=DUP_gs;EAS_AF=0,0.0026;END=134948570;EUR_AF=0,0.0013;NS=2504;SAS_AF=0,0.0111;SVTYPE=DUP\tGT\t0\nX\t134905005\tDUP_gs.X_CNV_X_134905005_134916506\tC\t<CN0>,<CN2>\t.\tPASS\tAC=0,22;AF=0,0.00582781;AFR_AF=0,0.007;AMR_AF=0,0.0038;AN=3775;CS=DUP_gs;EAS_AF=0,0.0039;END=134916506;EUR_AF=0,0.0026;NS=2504;SAS_AF=0,0.0111;SVTYPE=DUP\tGT\t0\nX\t134983163\tBI_GS_DEL1_B3_P3032_38\tG\t<CN0>\t100\tPASS\tAC=5;AF=0.0013245;AFR_AF=0.003;AMR_AF=0;AN=2542;CIEND=-3,4;CIPOS=-3,4;CS=DEL_union;EAS_AF=0;END=134993487;EUR_AF=0.0026;MC=YL_CN_GWD_5954;NS=2504;SAS_AF=0;SVTYPE=DEL\tGT\t.\nX\t134994786\tDUP_gs.X_CNV_X_134994786_135022311\tT\t<CN0>,<CN2>\t.\tPASS\tAC=0,1;AF=0,0.0002649;AFR_AF=0,0;AMR_AF=0,0;AN=3775;CS=DUP_gs;EAS_AF=0,0;END=135022311;EUR_AF=0,0;NS=2504;SAS_AF=0,0.0014;SVTYPE=DUP\tGT\t0\nX\t135052293\tBI_GS_DEL1_B3_P3033_3\tG\t<CN0>\t100\tPASS\tAC=339;AF=0.300132;AFR_AF=0.2871;AMR_AF=0.2863;AN=2542;CIEND=-46,47;CIPOS=-46,47;CS=DEL_union;EAS_AF=0.2932;END=135052832;EUR_AF=0.3368;NS=2504;SAS_AF=0.2967;SVTYPE=DEL\tGT\t.\nX\t135105322\tDEL_pindel_54647\tGTATATATATATATATATATATATATATATATATATATATATATATATATA\tG\t.\tPASS\tAC=969;AF=0.256689;AFR_AF=0.2861;AMR_AF=0.25;AN=3775;CS=DEL_pindel;EAS_AF=0.2042;END=135105372;EUR_AF=0.2454;NS=2504;SAS_AF=0.2883;SVTYPE=DEL\tGT\t0\nX\t135115762\tDEL_pindel_54648\tACCTTTCATCTTCCCTTTCCCCATCAGTGCTGTGGAAAAGGAAACCCACACAGACAGATT\tA\t.\tPASS\tAC=1238;AF=0.327947;AFR_AF=0.3101;AMR_AF=0.3263;AN=3775;CS=DEL_pindel;EAS_AF=0.3076;END=135115821;EUR_AF=0.3342;NS=2504;SAS_AF=0.3691;SVTYPE=DEL\tGT\t1\nX\t135152197\tALU_umary_ALU_12798\tT\t<INS:ME:ALU>\t.\tPASS\tAC=14;AF=0.00370861;AFR_AF=0.014;AMR_AF=0;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0;MEINFO=AluUndef,1,281,-;NS=2504;SAS_AF=0;SVLEN=280;SVTYPE=ALU;TSD=CAGTGCAGCACATATCT\tGT\t0\nX\t135157982\tDEL_pindel_54650\tCAAGAAAATAAAACAGGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAAAATGGTGAAACCCCGTCTCTACTAAAAATACAAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA\tC\t.\tPASS\tAC=2474;AF=0.655364;AFR_AF=0.6471;AMR_AF=0.6565;AN=3775;CS=DEL_pindel;EAS_AF=0.6361;END=135158313;EUR_AF=0.6815;MEINFO=AluYa5,1,281,+;NS=2504;SAS_AF=0.6588;SVTYPE=DEL_ALU\tGT\t1\nX\t135217358\tYL_CN_ACB_5155\tT\t<CN0>\t100\tPASS\tAC=8;AF=0.0100662;AFR_AF=0.014;AMR_AF=0.0153;AN=2542;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0.0092;END=135220852;EUR_AF=0.0091;NS=2504;SAS_AF=0.0028;SVTYPE=DEL\tGT\t.\nX\t135299187\tUW_VH_4107\tA\t<CN0>\t100\tPASS\tAC=11;AF=0.00450331;AFR_AF=0.002;AMR_AF=0.0019;AN=2542;CIEND=0,222;CIPOS=-285,0;CS=DEL_union;EAS_AF=0.0013;END=135302198;EUR_AF=0.017;NS=2504;SAS_AF=0;SVTYPE=DEL\tGT\t.\nX\t135326848\tDEL_pindel_54654\tTTCTTTCTCTTTTCGCTCCTTCAGCTTTCTCTGTCTTTCCTCCATCTGTTTTTCATATTGGAGCTTGGTCTTTCTTTCTTTTTCAAGTAGTTGTGTTTCTTTATTGGCTGAAATATTCCAAATAC\tT\t.\tPASS\tAC=129;AF=0.0341722;AFR_AF=0.009;AMR_AF=0.0477;AN=3775;CS=DEL_pindel;EAS_AF=0.0288;END=135326972;EUR_AF=0.0574;NS=2504;SAS_AF=0.0404;SVTYPE=DEL\tGT\t1\nX\t135555215\tDEL_pindel_54658\tGAATGAAGGGAGGAAGGGAGGGAGGAATGAAGGGAAGAAGGGGAGGAATGAAGGGAGGAAGGGAGGGAGGAATGAAGGGAAGAAGGGGAGA\tG\t.\tPASS\tAC=1141;AF=0.302252;AFR_AF=0.2951;AMR_AF=0.2996;AN=3775;CS=DEL_pindel;EAS_AF=0.2814;END=135555305;EUR_AF=0.2924;NS=2504;SAS_AF=0.3468;SVTYPE=DEL\tGT\t1\nX\t135563175\tDEL_pindel_54659\tTGATAGAATTTACTTCTATCTCACTTGTGACATGGATTCTAGTTTGTGCCTAGGTTGTGGCCCTTGCTAGGGTTCCAACATCGCAGGCAAGTCTGGTAATTTGGAGGAACAGTGGTAGGGAAGAGGGCCTCCGAAGA\tT\t.\tPASS\tAC=1199;AF=0.317616;AFR_AF=0.3161;AMR_AF=0.3053;AN=3775;CS=DEL_pindel;EAS_AF=0.305;END=135563311;EUR_AF=0.3042;NS=2504;SAS_AF=0.3565;SVTYPE=DEL\tGT\t1\nX\t135769569\tL1_umary_LINE1_3139\tC\t<INS:ME:LINE1>\t.\tPASS\tAC=1;AF=0.0002649;AFR_AF=0;AMR_AF=0.0019;AN=3775;CS=L1_umary;EAS_AF=0;EUR_AF=0;MEINFO=LINE1,3333,5808,+;NS=2504;SAS_AF=0;SVLEN=2475;SVTYPE=LINE1;TSD=AAGAAGATACATTAAC\tGT\t0\nX\t135939455\tYL_CN_STU_4677\tA\t<CN0>\t100\tPASS\tAC=5;AF=0.0015894;AFR_AF=0.002;AMR_AF=0;AN=2542;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0;END=135943733;EUR_AF=0.0039;NS=2504;SAS_AF=0.0014;SVTYPE=DEL\tGT\t.\nX\t135994495\tBI_GS_DEL1_B2_P3033_496\tA\t<CN0>\t100\tPASS\tAC=7;AF=0.00264901;AFR_AF=0.005;AMR_AF=0.0019;AN=2542;CIEND=-41,41;CIPOS=-41,41;CS=DEL_union;EAS_AF=0.0039;END=136001854;EUR_AF=0.0013;MC=YL_CN_KHV_5090;NS=2504;SAS_AF=0;SVTYPE=DEL\tGT\t.\nX\t136013968\tALU_umary_ALU_12799\tT\t<INS:ME:ALU>\t.\tPASS\tAC=4;AF=0.0010596;AFR_AF=0.002;AMR_AF=0.0019;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0.0013;MEINFO=AluYc1,10,279,-;NS=2504;SAS_AF=0;SVLEN=269;SVTYPE=ALU;TSD=null\tGT\t0\nX\t136025714\tALU_umary_ALU_12800\tC\t<INS:ME:ALU>\t.\tPASS\tAC=71;AF=0.0188079;AFR_AF=0;AMR_AF=0.0115;AN=3775;CS=ALU_umary;EAS_AF=0.0288;EUR_AF=0.0235;MEINFO=AluYa5,1,270,-;NS=2504;SAS_AF=0.0348;SVLEN=269;SVTYPE=ALU;TSD=GGAAATGTCAGCTCTTTTC\tGT\t0\nX\t136185681\tYL_CN_CHS_4790\tG\t<CN0>\t100\tPASS\tAC=36;AF=0.0135099;AFR_AF=0.0329;AMR_AF=0.0019;AN=2542;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0.0131;END=136194340;EUR_AF=0.0052;NS=2504;SAS_AF=0.0042;SVTYPE=DEL\tGT\t.\nX\t136185841\tBI_GS_DEL1_B3_P3034_4\tG\t<CN0>\t100\tPASS\tAC=43;AF=0.0161589;AFR_AF=0.0429;AMR_AF=0.0019;AN=2542;CIEND=-37,37;CIPOS=-37,37;CS=DEL_union;EAS_AF=0.0131;END=136190378;EUR_AF=0.0052;MC=YL_CN_MSL_4109;NS=2504;SAS_AF=0.0042;SVTYPE=DEL\tGT\t.\nX\t136344615\tYL_CN_BEB_3753\tT\t<CN0>\t100\tPASS\tAC=5;AF=0.0015894;AFR_AF=0.002;AMR_AF=0;AN=2542;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0;END=136349822;EUR_AF=0.0039;NS=2504;SAS_AF=0.0014;SVTYPE=DEL\tGT\t.\nX\t136349840\tALU_umary_ALU_12801\tA\t<INS:ME:ALU>\t.\tPASS\tAC=2037;AF=0.539603;AFR_AF=0.2911;AMR_AF=0.7176;AN=3775;CS=ALU_umary;EAS_AF=0.5759;EUR_AF=0.7285;MEINFO=AluUndef,1,281,+;NS=2504;SAS_AF=0.5167;SVLEN=280;SVTYPE=ALU;TSD=AAAAGCTCTGGTTGGTGGA\tGT\t0\nX\t136719323\tBI_GS_DEL1_B5_P3034_641\tT\t<CN0>\t100\tPASS\tAC=8;AF=0.00264901;AFR_AF=0.006;AMR_AF=0;AN=2542;CIEND=-22,23;CIPOS=-22,23;CS=DEL_union;EAS_AF=0.0013;END=136722865;EUR_AF=0.0039;MC=YL_CN_LWK_4290;NS=2504;SAS_AF=0;SVTYPE=DEL\tGT\t.\nX\t136957297\tALU_umary_ALU_12802\tT\t<INS:ME:ALU>\t.\tPASS\tAC=1400;AF=0.370861;AFR_AF=0.3599;AMR_AF=0.2691;AN=3775;CS=ALU_umary;EAS_AF=0.3953;EUR_AF=0.4191;MEINFO=AluUndef,16,281,-;NS=2504;SAS_AF=0.383;SVLEN=265;SVTYPE=ALU;TSD=GATGAAGTGTGATTT\tGT\t0\nX\t137172446\tDEL_pindel_54667\tGTCTATGACGAACCCACAATCAATATTATACTGAATGGGGAAAAGTTGAAAGAGTTCACC\tG\t.\tPASS\tAC=93;AF=0.0246358;AFR_AF=0.0329;AMR_AF=0.0172;AN=3775;CS=DEL_pindel;EAS_AF=0.0406;END=137172505;EUR_AF=0.0183;NS=2504;SAS_AF=0.0084;SVTYPE=DEL\tGT\t0\nX\t137234502\tDEL_pindel_54668\tATATATATATGTATATATATGTATATATGTATATATACGTATATATATATGTATATATATGTATATATGTATATATACGTATATATATATG\tA\t.\tPASS\tAC=914;AF=0.242119;AFR_AF=0.2393;AMR_AF=0.2195;AN=3775;CS=DEL_pindel;EAS_AF=0.2251;END=137234592;EUR_AF=0.2441;NS=2504;SAS_AF=0.2786;SVTYPE=DEL\tGT\t1\nX\t137241822\tUW_VH_20012\tA\t<CN0>\t100\tPASS\tAC=6;AF=0.0015894;AFR_AF=0.002;AMR_AF=0;AN=2542;CIEND=0,83;CIPOS=-65,0;CS=DEL_union;EAS_AF=0;END=137248008;EUR_AF=0.0052;MC=YL_CN_CEU_5499;NS=2504;SAS_AF=0;SVTYPE=DEL\tGT\t.\nX\t137271183\tDEL_pindel_54669\tCTTTTCCCAAATAAAGTCACATTCACGGGTTCCAGGGGTTGAGACATGGACATATATTTTTGGGGGCCAACATTCAACCCACAACAGGCAGTGATTTGACAGTTAAAACATTGATGGCTAAATGTCTAACTACATTTCATCTCTCAGATCCTATAGACACATGTTACAGTTAGTAGAGTTCAAACATAACGTTAATATCTGTTGATGATGCAAGAACTTAACTT\tC\t.\tPASS\tAC=2306;AF=0.610861;AFR_AF=0.5543;AMR_AF=0.5802;AN=3775;CS=DEL_pindel;EAS_AF=0.5733;END=137271406;EUR_AF=0.6775;NS=2504;SAS_AF=0.6811;SVTYPE=DEL\tGT\t1\nX\t137350678\tDUP_gs.X_CNV_X_137350678_137377835\tC\t<CN0>,<CN2>\t.\tPASS\tAC=0,2;AF=0,0.0005298;AFR_AF=0,0;AMR_AF=0,0;AN=3775;CS=DUP_gs;EAS_AF=0,0.0026;END=137377835;EUR_AF=0,0;NS=2504;SAS_AF=0,0;SVTYPE=DUP\tGT\t0\nX\t137711562\tDEL_pindel_54672\tATTTAGAGTTGTAATCCCAATGTGTTGAGGGAGGGACCTGGTGGGAGGTGATTGGATCCTCGGGGCGGTTTCCCCATGCTGTCTCATATAGTGAGGAAGTTCTCACTAAATCTGTTTGATAAGTGGCGCTTTCCCATTCTCTCTCCTGCTGCCACGTGGAAAAGGTCCTTGCTTCCCCTTCATCTTCTGCCATGATGGTAAGTTTCCTGAGGCCTCCCCAGCCATGCAGAACTGTGAGTCAATTAAACCTCTTTCCTTTATAAATTACCCAGTCTCAGGTAGTATCTTTATAGCAGCGTGAGAATGAACTAATACCAGTGGTTCTCAAAGTCCCGAGGATCAACAGCCTCAGCATCACCTGGAAACTTGTTAGAAATGCCAAGT\tA\t.\tPASS\tAC=371;AF=0.0982781;AFR_AF=0.0578;AMR_AF=0.0897;AN=3775;CS=DEL_pindel;EAS_AF=0.1322;END=137711945;EUR_AF=0.1188;NS=2504;SAS_AF=0.1031;SVTYPE=DEL\tGT\t1\nX\t138122571\tUW_VH_15787\tA\t<CN0>\t100\tPASS\tAC=16;AF=0.00609272;AFR_AF=0.0169;AMR_AF=0.0019;AN=2542;CIEND=0,252;CIPOS=-243,0;CS=DEL_union;EAS_AF=0;END=138130736;EUR_AF=0.0065;MC=YL_CN_ESN_4509,EM_DL_DEL107205,BI_GS_DEL1_B3_P3036_3;NS=2504;SAS_AF=0;SVTYPE=DEL\tGT\t.\nX\t138146418\tDEL_pindel_54684\tGCATAGAGCAGAGTTCTTTTTTTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCCGGACTGCAGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGAC\tG\t.\tPASS\tAC=1612;AF=0.42702;AFR_AF=0.4786;AMR_AF=0.4179;AN=3775;CS=DEL_pindel;EAS_AF=0.3639;END=138146696;EUR_AF=0.376;MEINFO=AluY,68,281,-;NS=2504;SAS_AF=0.4833;SVTYPE=DEL_ALU\tGT\t1\nX\t138154195\tYL_CN_PUR_5753\tC\t<CN0>\t100\tPASS\tAC=8;AF=0.00211921;AFR_AF=0.002;AMR_AF=0.0019;AN=2542;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0;END=138205844;EUR_AF=0.0065;NS=2504;SAS_AF=0;SVTYPE=DEL\tGT\t.\nX\t138157986\tDEL_pindel_54685\tGTGTATTTCTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCCGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTT\tG\t.\tPASS\tAC=2332;AF=0.617748;AFR_AF=0.65;AMR_AF=0.6164;AN=3775;CS=DEL_pindel;EAS_AF=0.6204;END=138158176;EUR_AF=0.6136;MEINFO=AluY,128,281,-;NS=2504;SAS_AF=0.5752;SVTYPE=DEL_ALU\tGT\t1\nX\t138261197\tBI_GS_DEL1_B2_P3036_157\tG\t<CN0>\t100\tPASS\tAC=8;AF=0.00211921;AFR_AF=0.002;AMR_AF=0;AN=2542;CIEND=-8,8;CIPOS=-8,8;CS=DEL_union;EAS_AF=0.0013;END=138276559;EUR_AF=0.0065;MC=EM_DL_DEL107208,YL_CN_KHV_5093;NS=2504;SAS_AF=0;SVTYPE=DEL\tGT\t.\nX\t138350817\tDEL_pindel_54687\tGTTCAAGTGATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAAGCATGTGCCACCACGCCTGGCTAATTTTTTATTTTTGGTAGAGATGAGGTTTCACCATGTTGGCCAGGCTGGTCT\tG\t.\tPASS\tAC=1146;AF=0.303576;AFR_AF=0.2891;AMR_AF=0.292;AN=3775;CS=DEL_pindel;EAS_AF=0.2997;END=138350939;EUR_AF=0.295;NS=2504;SAS_AF=0.3454;SVTYPE=DEL\tGT\t1\nX\t138384894\tDEL_pindel_54691\tTAGAATTCTAGGTGCAAGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGAGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCCAGGGGGCGGAGCCTGCAGTGAGCCGAGATTGCGCCACTGCACTCCAGCCTGGGCGACAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA\tT\t.\tPASS\tAC=2468;AF=0.653775;AFR_AF=0.7079;AMR_AF=0.6145;AN=3775;CS=DEL_pindel;EAS_AF=0.6374;END=138385220;EUR_AF=0.6554;MEINFO=AluYe,1,281,+;NS=2504;SAS_AF=0.6226;SVTYPE=DEL_ALU\tGT\t1\nX\t138420669\tBI_GS_DEL1_B5_P3036_388\tT\t<CN0>\t100\tPASS\tAC=9;AF=0.00264901;AFR_AF=0.002;AMR_AF=0.0076;AN=2542;CIEND=-1,1;CIPOS=-1,1;CS=DEL_union;EAS_AF=0;END=138435943;EUR_AF=0.0052;MC=YL_CN_MXL_3793;NS=2504;SAS_AF=0;SVTYPE=DEL\tGT\t.\nX\t138438676\tDEL_pindel_54693\tAAAGAAACCTAAAACAAAATGAACAAGACAGGTCAAAACAAAAAAAAAAAAAAGGAAAAAGAAAGGATACAGAGTATTTG\tA\t.\tPASS\tAC=1093;AF=0.289536;AFR_AF=0.2682;AMR_AF=0.2882;AN=3775;CS=DEL_pindel;EAS_AF=0.284;END=138438755;EUR_AF=0.2781;NS=2504;SAS_AF=0.3384;SVTYPE=DEL\tGT\t1\nX\t138479906\tALU_umary_ALU_12803\tA\t<INS:ME:ALU>\t.\tPASS\tAC=12;AF=0.00317881;AFR_AF=0.012;AMR_AF=0;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0;MEINFO=AluUndef,1,281,+;NS=2504;SAS_AF=0;SVLEN=280;SVTYPE=ALU;TSD=null\tGT\t0\nX\t138500881\tDUP_gs.X_CNV_X_138500881_138524083\tC\t<CN0>,<CN2>\t.\tPASS\tAC=0,1;AF=0,0.0002649;AFR_AF=0,0;AMR_AF=0,0.0019;AN=3775;CS=DUP_gs;EAS_AF=0,0;END=138524083;EUR_AF=0,0;NS=2504;SAS_AF=0,0;SVTYPE=DUP\tGT\t0\nX\t138508519\tUW_VH_11021\tA\t<CN0>\t100\tPASS\tAC=14;AF=0.0317881;AFR_AF=0.0259;AMR_AF=0.0324;AN=2542;CIEND=0,215;CIPOS=-253,0;CS=DEL_union;EAS_AF=0.0275;END=138509925;EUR_AF=0.0444;MC=BI_GS_DEL1_B2_P3036_303;NS=2504;SAS_AF=0.0306;SVTYPE=DEL\tGT\t.\nX\t138744482\tALU_umary_ALU_12804\tT\t<INS:ME:ALU>\t.\tPASS\tAC=85;AF=0.0225166;AFR_AF=0.0798;AMR_AF=0.0095;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0;MEINFO=AluUndef,3,281,-;NS=2504;SAS_AF=0;SVLEN=278;SVTYPE=ALU;TSD=CCCCTATAAAGATTTT\tGT\t0\nX\t138792013\tDUP_gs.X_CNV_X_138792013_138951270\tA\t<CN0>,<CN2>\t.\tPASS\tAC=0,1;AF=0,0.0002649;AFR_AF=0,0;AMR_AF=0,0;AN=3775;CS=DUP_gs;EAS_AF=0,0.0013;END=138951270;EUR_AF=0,0;NS=2504;SAS_AF=0,0;SVTYPE=DUP\tGT\t0\nX\t138934761\tDUP_gs.X_CNV_X_138934761_139013426\tG\t<CN0>,<CN2>\t.\tPASS\tAC=0,3;AF=0,0.0007947;AFR_AF=0,0.001;AMR_AF=0,0;AN=3775;CS=DUP_gs;EAS_AF=0,0.0026;END=139013426;EUR_AF=0,0;NS=2504;SAS_AF=0,0;SVTYPE=DUP\tGT\t0\nX\t138941963\tDEL_pindel_54700\tTGAAAAGAAAGTGCTTGGCTGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGAAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAA\tT\t.\tPASS\tAC=1715;AF=0.454305;AFR_AF=0.6082;AMR_AF=0.4466;AN=3775;CS=DEL_pindel;EAS_AF=0.462;END=138942285;EUR_AF=0.329;MEINFO=AluYa5,1,281,+;NS=2504;SAS_AF=0.3705;SVTYPE=DEL_ALU\tGT\t1\nX\t139023159\tDUP_gs.X_CNV_X_139023159_139062252\tA\t<CN0>,<CN2>\t.\tPASS\tAC=0,1;AF=0,0.0002649;AFR_AF=0,0;AMR_AF=0,0;AN=3775;CS=DUP_gs;EAS_AF=0,0.0013;END=139062252;EUR_AF=0,0;NS=2504;SAS_AF=0,0;SVTYPE=DUP\tGT\t0\nX\t139045796\tDEL_pindel_54703\tGCATCACTCTACCTTACTTCAAACTATACTACAAGGCTACAGTAACCAAAACAGTATGGTGCTGGTACCAAAACAGATACATAGACCAAAGGAACAAAACAGAGGCCTCAGAAATGACACCACACATTTAAAGC\tG\t.\tPASS\tAC=1546;AF=0.409536;AFR_AF=0.4317;AMR_AF=0.3989;AN=3775;CS=DEL_pindel;EAS_AF=0.4542;END=139045929;EUR_AF=0.3512;NS=2504;SAS_AF=0.4011;SVTYPE=DEL\tGT\t1\nX\t139091026\tBI_GS_DEL1_B5_P3037_55\tA\t<CN0>\t100\tPASS\tAC=10;AF=0.0233113;AFR_AF=0.0229;AMR_AF=0.0248;AN=2542;CIEND=-6,7;CIPOS=-6,7;CS=DEL_union;EAS_AF=0.017;END=139093375;EUR_AF=0.03;MC=EM_DL_DEL107218;NS=2504;SAS_AF=0.0223;SVTYPE=DEL\tGT\t.\nX\t139113319\tDUP_gs.X_CNV_X_139113319_139125266\tC\t<CN0>,<CN2>\t.\tPASS\tAC=0,7;AF=0,0.0018543;AFR_AF=0,0.006;AMR_AF=0,0;AN=3775;CS=DUP_gs;EAS_AF=0,0.0013;END=139125266;EUR_AF=0,0;NS=2504;SAS_AF=0,0;SVTYPE=DUP\tGT\t0\nX\t139134371\tEM_DL_DEL107219\tG\t<CN0>\t100\tPASS\tAC=8;AF=0.00211921;AFR_AF=0.002;AMR_AF=0.0019;AN=2542;CIEND=-150,150;CIPOS=-150,150;CS=DEL_union;EAS_AF=0.0013;END=139142432;EUR_AF=0.0052;MC=YL_CN_CHS_4791;NS=2504;SAS_AF=0;SVTYPE=DEL\tGT\t.\nX\t139142107\tBI_GS_DEL1_B4_P3037_18\tT\t<CN0>\t100\tPASS\tAC=8;AF=0.0161589;AFR_AF=0.009;AMR_AF=0.0229;AN=2542;CIEND=-3,3;CIPOS=-3,3;CS=DEL_union;EAS_AF=0.0131;END=139144002;EUR_AF=0.0261;NS=2504;SAS_AF=0.0139;SVTYPE=DEL\tGT\t.\nX\t139494778\tYL_CN_ITU_4764\tT\t<CN0>\t100\tPASS\tAC=135;AF=0.0582782;AFR_AF=0.1296;AMR_AF=0.1126;AN=2542;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0.0065;END=139503081;EUR_AF=0.0222;MC=UW_VH_12965,BI_GS_DEL1_B4_P3037_55,YL_CN_FIN_4370;NS=2504;SAS_AF=0.0125;SVTYPE=DEL\tGT\t.\nX\t139494849\tYL_CN_JPT_4780\tA\t<CN0>\t100\tPASS\tAC=17;AF=0.00476821;AFR_AF=0.011;AMR_AF=0.0019;AN=2542;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0.0013;END=139512613;EUR_AF=0.0065;MC=BI_GS_DEL1_B5_P3037_345;NS=2504;SAS_AF=0;SVTYPE=DEL\tGT\t.\nX\t139502739\tBI_GS_DEL1_B3_P3037_14\tA\t<CN0>\t100\tPASS\tAC=73;AF=0.110464;AFR_AF=0.1057;AMR_AF=0.1069;AN=2542;CIEND=-58,58;CIPOS=-58,58;CS=DEL_union;EAS_AF=0.1099;END=139503830;EUR_AF=0.1358;NS=2504;SAS_AF=0.0933;SVTYPE=DEL\tGT\t.\nX\t139502775\tYL_CN_ACB_5159\tG\t<CN0>\t100\tPASS\tAC=9;AF=0.00264901;AFR_AF=0.004;AMR_AF=0;AN=2542;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0.0013;END=139515871;EUR_AF=0.0065;NS=2504;SAS_AF=0;SVTYPE=DEL\tGT\t.\nX\t139502853\tDEL_pindel_54712\tAGAAAGTCATTGGGGTTCAGCTTCCCTCTAAGCCCCTAACATGTTTGTTCTAGTTTATTTCTGGTGACTTCAGTGCTTTTAAAAAGCAATATATAAGCTATATCTAGCTTATATATTGCTTTTTAAAAGCACTGAAGTCACCAGAAATAAACTAGAACAAACATGTTAGGGGCTTAGAGGGAAGCTGAACCCTTTCAAAATTGATATGGTTGGAGTTGGTTGGGGAGATTGGAAATGTTGGT\tA\t.\tPASS\tAC=871;AF=0.230728;AFR_AF=0.1984;AMR_AF=0.2309;AN=3775;CS=DEL_pindel;EAS_AF=0.2539;END=139503094;EUR_AF=0.2324;NS=2504;SAS_AF=0.2493;SVTYPE=DEL\tGT\t1\nX\t139760537\tEM_DL_DEL107227\tC\t<CN0>\t100\tPASS\tAC=9;AF=0.00238411;AFR_AF=0.003;AMR_AF=0;AN=2542;CIEND=-150,150;CIPOS=-150,150;CS=DEL_union;EAS_AF=0.0026;END=139771719;EUR_AF=0.0052;NS=2504;SAS_AF=0;SVTYPE=DEL\tGT\t.\nX\t139853445\tALU_umary_ALU_12805\tA\t<INS:ME:ALU>\t.\tPASS\tAC=184;AF=0.0487417;AFR_AF=0.0927;AMR_AF=0.0649;AN=3775;CS=ALU_umary;EAS_AF=0.0615;EUR_AF=0.0091;MEINFO=AluYc1,36,281,+;NS=2504;SAS_AF=0.0042;SVLEN=245;SVTYPE=ALU;TSD=AAAAGACAAAAGCA\tGT\t0\nX\t140028196\tBI_GS_DEL1_B4_P3038_3\tC\t<CN0>\t100\tPASS\tAC=8;AF=0.00211921;AFR_AF=0.004;AMR_AF=0;AN=2542;CIEND=-2,3;CIPOS=-2,3;CS=DEL_union;EAS_AF=0;END=140034012;EUR_AF=0.0052;MC=YL_CN_YRI_5659;NS=2504;SAS_AF=0;SVTYPE=DEL\tGT\t.\nX\t140029452\tDEL_pindel_54719\tTATCTGGCAACTTTTATTCTCCATTAGATACCCATGGAAACTCTGGTGCTG\tT\t.\tPASS\tAC=360;AF=0.0953642;AFR_AF=0.0648;AMR_AF=0.1221;AN=3775;CS=DEL_pindel;EAS_AF=0.0982;END=140029502;EUR_AF=0.107;NS=2504;SAS_AF=0.1031;SVTYPE=DEL\tGT\t1\nX\t140039288\tDUP_gs.X_CNV_X_140039288_140078780\tA\t<CN0>,<CN2>\t.\tPASS\tAC=2,6;AF=0.0005298,0.0015894;AFR_AF=0,0;AMR_AF=0,0;AN=3775;CS=DUP_gs;EAS_AF=0,0.0065;END=140078780;EUR_AF=0.0026,0;NS=2504;SAS_AF=0,0.0014;SVTYPE=CNV\tGT\t0\nX\t140292652\tDUP_gs.X_CNV_X_140292652_140335017\tA\t<CN0>,<CN2>\t.\tPASS\tAC=1,2;AF=0.0002649,0.0005298;AFR_AF=0.001,0.001;AMR_AF=0,0;AN=3775;CS=DUP_gs;EAS_AF=0,0;END=140335017;EUR_AF=0,0.0013;NS=2504;SAS_AF=0,0;SVTYPE=CNV\tGT\t0\nX\t140322707\tUW_VH_11764\tG\t<CN0>\t100\tPASS\tAC=12;AF=0.00397351;AFR_AF=0.005;AMR_AF=0.0019;AN=2542;CIEND=0,358;CIPOS=-82,0;CS=DEL_union;EAS_AF=0;END=140657766;EUR_AF=0.0091;MC=UW_VH_13631,UW_VH_24614,UW_VH_24611,UW_VH_10809,UW_VH_7943,UW_VH_25090;NS=2504;SAS_AF=0.0028;SVTYPE=DEL\tGT\t.\nX\t140334291\tDUP_gs.X_CNV_X_140334291_140560547\tA\t<CN0>,<CN2>\t.\tPASS\tAC=6,1;AF=0.0015894,0.0002649;AFR_AF=0.004,0;AMR_AF=0,0;AN=3775;CS=DUP_gs;EAS_AF=0,0;END=140560547;EUR_AF=0.0013,0;NS=2504;SAS_AF=0.0014,0.0014;SVTYPE=CNV\tGT\t0\nX\t140375697\tDEL_pindel_54724\tACATCACAGTTTTTCCCAGGGGAGAAGGAGGGTGAAATAACAAGAGACTACTTAGGATAGTTAATTATAACAGGCACACAAGATTGGGGCAATCCTCGTCTCTACTTTATAAG\tA\t.\tPASS\tAC=1278;AF=0.338543;AFR_AF=0.3759;AMR_AF=0.3244;AN=3775;CS=DEL_pindel;EAS_AF=0.3128;END=140375809;EUR_AF=0.3055;NS=2504;SAS_AF=0.3593;SVTYPE=DEL\tGT\t1\nX\t140396601\tALU_umary_ALU_12806\tG\t<INS:ME:ALU>\t.\tPASS\tAC=1;AF=0.0002649;AFR_AF=0;AMR_AF=0;AN=3775;CS=ALU_umary;EAS_AF=0.0013;EUR_AF=0;MEINFO=AluUndef,36,281,-;NS=2504;SAS_AF=0;SVLEN=245;SVTYPE=ALU;TSD=null\tGT\t0\nX\t140476728\tUW_VH_2342\tA\t<CN0>\t100\tPASS\tAC=1006;AF=0.382781;AFR_AF=0.4506;AMR_AF=0.2863;AN=2542;CIEND=0,423;CIPOS=-391,0;CS=DEL_union;EAS_AF=0.3887;END=140479230;EUR_AF=0.3238;MC=BI_GS_DEL1_B2_P3038_127,YL_CN_ESN_4512,EM_DL_DEL107239;NS=2504;SAS_AF=0.415;SVTYPE=DEL\tGT\t.\nX\t140667978\tDUP_gs.X_CNV_X_140667978_140774647\tC\t<CN0>,<CN2>\t.\tPASS\tAC=8,6;AF=0.00211921,0.0015894;AFR_AF=0.004,0.001;AMR_AF=0.0019,0;AN=3775;CS=DUP_gs;EAS_AF=0.0026,0.0013;END=140774647;EUR_AF=0,0;NS=2504;SAS_AF=0.0014,0.0056;SVTYPE=CNV\tGT\t0\nX\t140671851\tUW_VH_14239\tA\t<CN0>\t100\tPASS\tAC=16;AF=0.00529801;AFR_AF=0.007;AMR_AF=0.0038;AN=2542;CIEND=0,25;CIPOS=-45,0;CS=DEL_union;EAS_AF=0.0039;END=140785735;EUR_AF=0.0091;MC=UW_VH_24620,UW_VH_24616,UW_VH_24618;NS=2504;SAS_AF=0.0014;SVTYPE=DEL\tGT\t.\nX\t140789921\tDUP_gs.X_CNV_X_140789921_140855079\tT\t<CN0>,<CN2>\t.\tPASS\tAC=3,3;AF=0.0007947,0.0007947;AFR_AF=0.002,0;AMR_AF=0.0019,0;AN=3775;CS=DUP_gs;EAS_AF=0,0;END=140855079;EUR_AF=0,0.0026;NS=2504;SAS_AF=0,0.0014;SVTYPE=CNV\tGT\t0\nX\t140792712\tYL_CN_PEL_4399\tC\t<CN0>\t100\tPASS\tAC=9;AF=0.00238411;AFR_AF=0.003;AMR_AF=0.0038;AN=2542;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0;END=140835294;EUR_AF=0.0052;NS=2504;SAS_AF=0;SVTYPE=DEL\tGT\t.\nX\t140792830\tDUP_gs.X_CNV_X_140792830_140834797\tC\t<CN0>,<CN2>\t.\tPASS\tAC=1,2;AF=0.0002649,0.0005298;AFR_AF=0,0.001;AMR_AF=0.0019,0;AN=3775;CS=DUP_gs;EAS_AF=0,0;END=140834797;EUR_AF=0,0;NS=2504;SAS_AF=0,0.0014;SVTYPE=CNV\tGT\t0\nX\t140887255\tDEL_pindel_54730\tGTGAGAATATGCGGTGTTTGGTTTTTTGTCCTTGTGATAGTTTGCTGAGAATAATGGTTACCAGCTTCATCCATGTCCCTACAAAGGACA\tG\t.\tPASS\tAC=445;AF=0.117881;AFR_AF=0.0828;AMR_AF=0.1412;AN=3775;CS=DEL_pindel;EAS_AF=0.1361;END=140887344;EUR_AF=0.1201;NS=2504;SAS_AF=0.1281;SVTYPE=DEL\tGT\t1\nX\t140957172\tBI_GS_DEL1_B2_P3038_277\tC\t<CN0>\t100\tPASS\tAC=24;AF=0.0598675;AFR_AF=0.0558;AMR_AF=0.0534;AN=2542;CIEND=-7,7;CIPOS=-7,7;CS=DEL_union;EAS_AF=0.0602;END=140958534;EUR_AF=0.077;NS=2504;SAS_AF=0.0515;SVTYPE=DEL\tGT\t.\nX\t140957745\tBI_GS_DEL1_B2_P3038_279\tT\t<CN0>\t100\tPASS\tAC=22;AF=0.055894;AFR_AF=0.0548;AMR_AF=0.0534;AN=2542;CIEND=-1,1;CIPOS=-1,1;CS=DEL_union;EAS_AF=0.0628;END=140959430;EUR_AF=0.0666;NS=2504;SAS_AF=0.0404;SVTYPE=DEL\tGT\t.\nX\t141084211\tUW_VH_12737\tA\t<CN0>\t100\tPASS\tAC=7;AF=0.00953642;AFR_AF=0.007;AMR_AF=0.0172;AN=2542;CIEND=0,33;CIPOS=-31,0;CS=DEL_union;EAS_AF=0.0092;END=141086866;EUR_AF=0.017;NS=2504;SAS_AF=0;SVTYPE=DEL\tGT\t.\nX\t141165498\tDEL_pindel_54734\tATGCAGTGCCTGACAGGCAAAGGTGGCAGGTGCCTGTCGACAGGGATCTAGCTGTCAGTCTTTGTTTCCTCAGCGAAGCGCTGCATTCTGGAGTTCCCGAGTCTGTGTTCTTTCCTCTCCCCTGAACGTCCAGGAACCACAAGCAACTCCCCAGCTTCCTTCCTGAGGCCAGGTTGAGGCACTGCTGCTTGTGCCACAGTCAGCAAGTGACCAGGGAGCAGTGCTGGATGGCCTCTGCATGGGAGAATAACCTTGCCCGGCACTGGAATGCAGGGCTTGAATGAGCCACAGTGGAGCGCTTAAGTATAAAAAGAGAGGCAGGTGAGTCTCGGCAATCTGAGGCAGAAACTATCCCTAGAGAGGGAGTTAGTTGTCCAAGTCCCATGAGAGAAAAGTGACAATGTGCAGGTGATAGCATGGCAAGGTAACAGTGGGGAGGATAGAGGGAGGGCAGCAGTGTATTGGGG\tA\t.\tPASS\tAC=42;AF=0.0111258;AFR_AF=0.0169;AMR_AF=0.0038;AN=3775;CS=DEL_pindel;EAS_AF=0.017;END=141165964;EUR_AF=0.0052;NS=2504;SAS_AF=0.0084;SVTYPE=DEL\tGT\t0\nX\t141197840\tL1_umary_LINE1_3141\tT\t<INS:ME:LINE1>\t.\tPASS\tAC=12;AF=0.00317881;AFR_AF=0.011;AMR_AF=0.0019;AN=3775;CS=L1_umary;EAS_AF=0;EUR_AF=0;MEINFO=LINE1,4767,6019,-;NS=2504;SAS_AF=0;SVLEN=1252;SVTYPE=LINE1;TSD=TTATTGCTGCTTGCTTATTTCT\tGT\t0\nX\t141204319\tL1_umary_LINE1_3142\tT\t<INS:ME:LINE1>\t.\tPASS\tAC=51;AF=0.0135099;AFR_AF=0.0499;AMR_AF=0.0019;AN=3775;CS=L1_umary;EAS_AF=0;EUR_AF=0;MEINFO=LINE1,2075,6018,-;NS=2504;SAS_AF=0;SVLEN=3943;SVTYPE=LINE1;TSD=TTGGTCTTAGTTCT\tGT\t0\nX\t141232859\tDEL_pindel_54737\tGATGTAGCTAACCTAGAATAATGCCAGGGATCCAGCCATGCTCATCCTGATAGGACATAGAGTGATTTTAAGGCAGTGTCGGGTGTTTTATATATCTATATCTATATATAGATATAGAT\tG\t.\tPASS\tAC=445;AF=0.117881;AFR_AF=0.0748;AMR_AF=0.1279;AN=3775;CS=DEL_pindel;EAS_AF=0.1401;END=141232977;EUR_AF=0.1423;NS=2504;SAS_AF=0.1212;SVTYPE=DEL\tGT\t1\nX\t141385372\tALU_umary_ALU_12807\tG\t<INS:ME:ALU>\t.\tPASS\tAC=2;AF=0.0005298;AFR_AF=0;AMR_AF=0;AN=3775;CS=ALU_umary;EAS_AF=0.0026;EUR_AF=0;MEINFO=AluUndef,1,250,+;NS=2504;SAS_AF=0;SVLEN=249;SVTYPE=ALU;TSD=null\tGT\t0\nX\t141469740\tL1_umary_LINE1_3143\tA\t<INS:ME:LINE1>\t.\tPASS\tAC=7;AF=0.0018543;AFR_AF=0;AMR_AF=0;AN=3775;CS=L1_umary;EAS_AF=0.0092;EUR_AF=0;MEINFO=LINE1,4591,6003,-;NS=2504;SAS_AF=0;SVLEN=1412;SVTYPE=LINE1;TSD=null\tGT\t0\nX\t141583593\tALU_umary_ALU_12808\tT\t<INS:ME:ALU>\t.\tPASS\tAC=36;AF=0.00953642;AFR_AF=0;AMR_AF=0;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0;MEINFO=AluUndef,3,259,-;NS=2504;SAS_AF=0.0501;SVLEN=256;SVTYPE=ALU;TSD=AT\tGT\t0\nX\t141843049\tBI_GS_DEL1_B2_P3039_412\tA\t<CN0>\t100\tPASS\tAC=8;AF=0.00211921;AFR_AF=0.003;AMR_AF=0;AN=2542;CIEND=-12,13;CIPOS=-12,13;CS=DEL_union;EAS_AF=0.0026;END=141860020;EUR_AF=0.0039;MC=YL_CN_CDX_3901;NS=2504;SAS_AF=0;SVTYPE=DEL\tGT\t.\nX\t141854565\tBI_GS_DEL1_B3_P3039_19\tT\t<CN0>\t100\tPASS\tAC=22;AF=0.00635762;AFR_AF=0.016;AMR_AF=0;AN=2542;CIEND=-1,2;CIPOS=-1,2;CS=DEL_union;EAS_AF=0.0052;END=141860145;EUR_AF=0.0052;MC=YL_CN_GWD_5964,EM_DL_DEL107251;NS=2504;SAS_AF=0;SVTYPE=DEL\tGT\t.\nX\t141893474\tBI_GS_DEL1_B3_P3039_20\tT\t<CN0>\t100\tPASS\tAC=8;AF=0.00980132;AFR_AF=0.011;AMR_AF=0.0095;AN=2542;CIEND=-6,7;CIPOS=-6,7;CS=DEL_union;EAS_AF=0.0079;END=141895729;EUR_AF=0.0157;NS=2504;SAS_AF=0.0042;SVTYPE=DEL\tGT\t.\nX\t141924785\tDEL_pindel_54746\tTATATTCTTTTTTATAGGTGCATAGTAATTCAAATTATAGAAGTAACATACTTTTTTCAAACATAACACTGTTGATATGCATTGAGGATATTTCCAGGATATATGATTTTTTTTTTTGGTATTACAAAACC\tT\t.\tPASS\tAC=964;AF=0.255364;AFR_AF=0.2213;AMR_AF=0.25;AN=3775;CS=DEL_pindel;EAS_AF=0.2631;END=141924915;EUR_AF=0.2598;NS=2504;SAS_AF=0.2939;SVTYPE=DEL\tGT\t0\nX\t141980345\tYL_CN_ITU_4770\tT\t<CN0>\t100\tPASS\tAC=9;AF=0.00423841;AFR_AF=0.002;AMR_AF=0;AN=2542;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0;END=141993319;EUR_AF=0.0065;MC=BI_GS_DEL1_B5_P3039_748;NS=2504;SAS_AF=0.0125;SVTYPE=DEL\tGT\t.\nX\t142004125\tDEL_pindel_54748\tCATATATATATATATATATATATATATATATATATATATATATATATATAT\tC\t.\tPASS\tAC=990;AF=0.262252;AFR_AF=0.2612;AMR_AF=0.2405;AN=3775;CS=DEL_pindel;EAS_AF=0.2343;END=142004175;EUR_AF=0.2559;NS=2504;SAS_AF=0.3162;SVTYPE=DEL\tGT\t1\nX\t142051221\tDEL_pindel_54749\tAGTCTATGTCTACATCGTTATATTCCTTCTCTTTTAGATCCCATTCACAGCCAAACAGGCTCC\tA\t.\tPASS\tAC=515;AF=0.136424;AFR_AF=0.0608;AMR_AF=0.1336;AN=3775;CS=DEL_pindel;EAS_AF=0.178;END=142051283;EUR_AF=0.1671;NS=2504;SAS_AF=0.1671;SVTYPE=DEL\tGT\t1\nX\t142197943\tDEL_pindel_54750\tCTAAAATCTTCTGCATATTTATGTTGTCACCTTCTGGGAAGAAGGAAAGAAACACACAAATACACACTCTAGTATTTTCTGAGATCTTACATATACCAGATGCTATACTAGACATGTTTG\tC\t.\tPASS\tAC=1466;AF=0.388344;AFR_AF=0.4357;AMR_AF=0.3416;AN=3775;CS=DEL_pindel;EAS_AF=0.3154;END=142198062;EUR_AF=0.3786;NS=2504;SAS_AF=0.4443;SVTYPE=DEL\tGT\t1\nX\t142297932\tBI_GS_DEL1_B3_P3040_13\tA\t<CN0>\t100\tPASS\tAC=6;AF=0.0119205;AFR_AF=0.016;AMR_AF=0.0057;AN=2542;CIEND=-9,10;CIPOS=-9,10;CS=DEL_union;EAS_AF=0.0039;END=142302367;EUR_AF=0.0131;MC=YL_CN_MSL_4117;NS=2504;SAS_AF=0.0181;SVTYPE=DEL\tGT\t.\nX\t142342209\tBI_GS_DEL1_B2_P3040_174\tT\t<CN0>\t100\tPASS\tAC=116;AF=0.170861;AFR_AF=0.1834;AMR_AF=0.1469;AN=2542;CIEND=-9,10;CIPOS=-9,10;CS=DEL_union;EAS_AF=0.1505;END=142343067;EUR_AF=0.1762;NS=2504;SAS_AF=0.1866;SVTYPE=DEL\tGT\t.\nX\t142369685\tDUP_gs.X_CNV_X_142369685_142515399\tT\t<CN0>,<CN2>\t.\tPASS\tAC=2,1;AF=0.0005298,0.0002649;AFR_AF=0.002,0.001;AMR_AF=0,0;AN=3775;CS=DUP_gs;EAS_AF=0,0;END=142515399;EUR_AF=0,0;NS=2504;SAS_AF=0,0;SVTYPE=CNV\tGT\t0\nX\t142499147\tALU_umary_ALU_12809\tC\t<INS:ME:ALU>\t.\tPASS\tAC=37;AF=0.00980132;AFR_AF=0.0359;AMR_AF=0.0019;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0;MEINFO=AluUndef,1,281,+;NS=2504;SAS_AF=0;SVLEN=280;SVTYPE=ALU;TSD=null\tGT\t0\nX\t142600307\tUW_VH_14318\tT\t<CN0>\t100\tPASS\tAC=8;AF=0.00211921;AFR_AF=0.002;AMR_AF=0.0019;AN=2542;CIEND=0,335;CIPOS=-118,0;CS=DEL_union;EAS_AF=0;END=142798883;EUR_AF=0.0065;MC=UW_VH_5404,UW_VH_5880,UW_VH_24127,EM_DL_DEL107261;NS=2504;SAS_AF=0;SVTYPE=DEL\tGT\t.\nX\t142833364\tDEL_pindel_54759\tGTCAAAAACTACACTAGTGCTTTCAATCAATATACTGGAAGCGTCTAGAGAACATGTCAAAATACAATTTTATTTATATATATATATGTATATATATATATATATATATATATATATATACATA\tG\t.\tPASS\tAC=1170;AF=0.309934;AFR_AF=0.327;AMR_AF=0.3053;AN=3775;CS=DEL_pindel;EAS_AF=0.2827;END=142833487;EUR_AF=0.2977;NS=2504;SAS_AF=0.3315;SVTYPE=DEL\tGT\t1\nX\t142885690\tALU_umary_ALU_12810\tA\t<INS:ME:ALU>\t.\tPASS\tAC=9;AF=0.00238411;AFR_AF=0;AMR_AF=0;AN=3775;CS=ALU_umary;EAS_AF=0.0092;EUR_AF=0;MEINFO=AluUndef,16,281,+;NS=2504;SAS_AF=0.0028;SVLEN=265;SVTYPE=ALU;TSD=ATAAATATAAAAGTGTTATTAC\tGT\t0\nX\t142926126\tALU_umary_ALU_12811\tT\t<INS:ME:ALU>\t.\tPASS\tAC=304;AF=0.0805298;AFR_AF=0.1974;AMR_AF=0.0573;AN=3775;CS=ALU_umary;EAS_AF=0.0026;EUR_AF=0.0822;MEINFO=AluUndef,1,281,-;NS=2504;SAS_AF=0.0153;SVLEN=280;SVTYPE=ALU;TSD=TGCTCTTTTTTGTT\tGT\t0\nX\t142958569\tALU_umary_ALU_12812\tC\t<INS:ME:ALU>\t.\tPASS\tAC=3;AF=0.0007947;AFR_AF=0.003;AMR_AF=0;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0;MEINFO=AluYa3_1,1,281,+;NS=2504;SAS_AF=0;SVLEN=280;SVTYPE=ALU;TSD=null\tGT\t0\nX\t143063721\tDEL_pindel_54763\tAAATTTCTCTCATAAATGCTGAGGAAGCCACCGAAAATTTCGTTTCTAAGTGTAGCTAATATGAGGATGAATCAGATTTCCAAGTAAGTCTCTGAAACATTCTCATGAAAAAGGGTTAAGTCTGTAGAAAGAGTCTGCAGCCCTGCACATAATGAAAAGTCCAATCCTGCACGTGC\tA\t.\tPASS\tAC=709;AF=0.187815;AFR_AF=0.1496;AMR_AF=0.1947;AN=3775;CS=DEL_pindel;EAS_AF=0.2068;END=143063896;EUR_AF=0.205;NS=2504;SAS_AF=0.1978;SVTYPE=DEL\tGT\t1\nX\t143329808\tALU_umary_ALU_12813\tA\t<INS:ME:ALU>\t.\tPASS\tAC=3;AF=0.0007947;AFR_AF=0;AMR_AF=0.0057;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0;MEINFO=AluUndef,1,281,-;NS=2504;SAS_AF=0;SVLEN=280;SVTYPE=ALU;TSD=null\tGT\t0\nX\t143420722\tALU_umary_ALU_12814\tC\t<INS:ME:ALU>\t.\tPASS\tAC=92;AF=0.0243709;AFR_AF=0;AMR_AF=0.0115;AN=3775;CS=ALU_umary;EAS_AF=0.0301;EUR_AF=0.0183;MEINFO=AluYa5,2,281,+;NS=2504;SAS_AF=0.0682;SVLEN=279;SVTYPE=ALU;TSD=AAAACAATGAGGTC\tGT\t0\nX\t143628378\tYL_CN_CHB_4749\tC\t<CN0>\t100\tPASS\tAC=127;AF=0.0484768;AFR_AF=0.006;AMR_AF=0.1011;AN=2542;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0.0458;END=143637701;EUR_AF=0.0836;MC=BI_GS_DEL1_B5_P3041_305,UW_VH_2150,UW_VH_3798;NS=2504;SAS_AF=0.0348;SVTYPE=DEL\tGT\t.\nX\t143657026\tUW_VH_15732\tG\t<CN0>\t100\tPASS\tAC=6;AF=0.00635762;AFR_AF=0.005;AMR_AF=0.0057;AN=2542;CIEND=0,212;CIPOS=-202,0;CS=DEL_union;EAS_AF=0.0052;END=143659596;EUR_AF=0.0117;MC=YL_CN_GWD_5967,BI_GS_DEL1_B3_P3041_14;NS=2504;SAS_AF=0.0042;SVTYPE=DEL\tGT\t.\nX\t143704684\tL1_umary_LINE1_3144\tC\t<INS:ME:LINE1>\t.\tPASS\tAC=192;AF=0.0508609;AFR_AF=0.1765;AMR_AF=0.021;AN=3775;CS=L1_umary;EAS_AF=0;EUR_AF=0.0052;MEINFO=LINE1,193,6019,+;NS=2504;SAS_AF=0;SVLEN=5826;SVTYPE=LINE1;TSD=GAAAATCCTGCTTGCC\tGT\t0\nX\t143717905\tYL_CN_PEL_4405\tA\t<CN0>\t100\tPASS\tAC=6;AF=0.00238411;AFR_AF=0.002;AMR_AF=0.0019;AN=2542;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0.0026;END=143724245;EUR_AF=0.0052;NS=2504;SAS_AF=0;SVTYPE=DEL\tGT\t.\nX\t143723351\tALU_umary_ALU_12815\tG\t<INS:ME:ALU>\t.\tPASS\tAC=226;AF=0.0598675;AFR_AF=0.0518;AMR_AF=0.0725;AN=3775;CS=ALU_umary;EAS_AF=0.0275;EUR_AF=0.0509;MEINFO=AluUndef,1,281,-;NS=2504;SAS_AF=0.1058;SVLEN=280;SVTYPE=ALU;TSD=null\tGT\t0\nX\t143778329\tDEL_pindel_54774\tAATAAATAATTGTTTAAAGCCTATATATATATATATATATATATATATATATATATAT\tA\t.\tPASS\tAC=830;AF=0.219868;AFR_AF=0.2263;AMR_AF=0.2634;AN=3775;CS=DEL_pindel;EAS_AF=0.2094;END=143778386;EUR_AF=0.1841;NS=2504;SAS_AF=0.2284;SVTYPE=DEL\tGT\t0\nX\t143843274\tDEL_pindel_54776\tCAAAAAGAGATTTGTTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGCGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCCGGCCTGGGCAACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAA\tC\t.\tPASS\tAC=1457;AF=0.38596;AFR_AF=0.4267;AMR_AF=0.3435;AN=3775;CS=DEL_pindel;EAS_AF=0.3717;END=143843581;EUR_AF=0.3238;MEINFO=AluYb6_2,13,281,+;NS=2504;SAS_AF=0.4415;SVTYPE=DEL_ALU\tGT\t1\nX\t144060275\tALU_umary_ALU_12816\tT\t<INS:ME:ALU>\t.\tPASS\tAC=27;AF=0.00715232;AFR_AF=0.0259;AMR_AF=0.0019;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0;MEINFO=AluUndef,3,281,-;NS=2504;SAS_AF=0;SVLEN=278;SVTYPE=ALU;TSD=null\tGT\t0\nX\t144130240\tALU_umary_ALU_12817\tG\t<INS:ME:ALU>\t.\tPASS\tAC=5;AF=0.0013245;AFR_AF=0.004;AMR_AF=0.0019;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0;MEINFO=AluUndef,1,281,-;NS=2504;SAS_AF=0;SVLEN=280;SVTYPE=ALU;TSD=null\tGT\t0\nX\t144180262\tBI_GS_DEL1_B2_P3042_91\tA\t<CN0>\t100\tPASS\tAC=7;AF=0.00211921;AFR_AF=0.003;AMR_AF=0.0019;AN=2542;CIEND=-25,25;CIPOS=-25,25;CS=DEL_union;EAS_AF=0;END=144190713;EUR_AF=0.0052;MC=YL_CN_PEL_4406;NS=2504;SAS_AF=0;SVTYPE=DEL\tGT\t.\nX\t144217923\tYL_CN_MSL_4118\tC\t<CN0>\t100\tPASS\tAC=10;AF=0.00264901;AFR_AF=0.004;AMR_AF=0.0019;AN=2542;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0;END=144309451;EUR_AF=0.0065;NS=2504;SAS_AF=0;SVTYPE=DEL\tGT\t.\nX\t144299026\tUW_VH_17084\tC\t<CN0>\t100\tPASS\tAC=9;AF=0.00238411;AFR_AF=0.004;AMR_AF=0.0019;AN=2542;CIEND=0,201;CIPOS=-190,0;CS=DEL_union;EAS_AF=0;END=144353484;EUR_AF=0.0052;MC=BI_GS_DEL1_B3_P3042_11,YL_CN_MSL_4119;NS=2504;SAS_AF=0;SVTYPE=DEL\tGT\t.\nX\t144322610\tUW_VH_6547\tA\t<CN0>\t100\tPASS\tAC=210;AF=0.237351;AFR_AF=0.2971;AMR_AF=0.2214;AN=2542;CIEND=0,339;CIPOS=-264,0;CS=DEL_union;EAS_AF=0.2186;END=144323238;EUR_AF=0.2219;MC=BI_GS_DEL1_B5_P3042_261;NS=2504;SAS_AF=0.2019;SVTYPE=DEL\tGT\t.\nX\t144326342\tYL_CN_TSI_4483\tC\t<CN0>\t100\tPASS\tAC=9;AF=0.00238411;AFR_AF=0.002;AMR_AF=0.0019;AN=2542;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0;END=144482243;EUR_AF=0.0078;NS=2504;SAS_AF=0;SVTYPE=DEL\tGT\t.\nX\t144365176\tDUP_gs.X_CNV_X_144365176_144397521\tT\t<CN0>,<CN2>\t.\tPASS\tAC=1,1;AF=0.0002649,0.0002649;AFR_AF=0,0;AMR_AF=0,0;AN=3775;CS=DUP_gs;EAS_AF=0,0;END=144397521;EUR_AF=0.0013,0.0013;NS=2504;SAS_AF=0,0;SVTYPE=CNV\tGT\t0\nX\t144422074\tBI_GS_DEL1_B1_P3042_253\tG\t<CN0>\t100\tPASS\tAC=2139;AF=0.836821;AFR_AF=0.7298;AMR_AF=0.9027;AN=2542;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.8469;END=144424508;EUR_AF=0.893;MC=EM_DL_DEL107278,YL_CN_MSL_4120;NS=2504;SAS_AF=0.8677;SVTYPE=DEL\tGT\t.\nX\t144443230\tALU_umary_ALU_12818\tT\t<INS:ME:ALU>\t.\tPASS\tAC=62;AF=0.0164238;AFR_AF=0.0558;AMR_AF=0.0115;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0;MEINFO=AluUndef,7,281,-;NS=2504;SAS_AF=0;SVLEN=274;SVTYPE=ALU;TSD=TCAATGACTTTT\tGT\t0\nX\t144454642\tDEL_pindel_54787\tTCATAAAATTAAATCAATGTCTACCATTTCTGTCATCTATTCTATTCATGATAATGTAAACTAAATGTTAGTGAGTTCATCACAGTTGTCATGTAATGTACAATCATTTGTTGAATTTTCCCTGGCCTGTAAAATCACTGGATAGGGGCTCCCTGTAAAACTAAGGCTAGGACCTTTGCAAACAAAA\tT\t.\tPASS\tAC=218;AF=0.0577483;AFR_AF=0.0389;AMR_AF=0.0534;AN=3775;CS=DEL_pindel;EAS_AF=0.0942;END=144454828;EUR_AF=0.0509;NS=2504;SAS_AF=0.0557;SVTYPE=DEL\tGT\t0\nX\t144887118\tBI_GS_DEL1_B3_P3042_33\tT\t<CN0>\t100\tPASS\tAC=307;AF=0.279205;AFR_AF=0.3071;AMR_AF=0.25;AN=2542;CIEND=-1,2;CIPOS=-1,2;CS=DEL_union;EAS_AF=0.2317;END=144887538;EUR_AF=0.3094;NS=2504;SAS_AF=0.2799;SVTYPE=DEL\tGT\t.\nX\t145052104\tBI_GS_DEL1_B2_P3043_25\tG\t<CN0>\t100\tPASS\tAC=41;AF=0.0193377;AFR_AF=0.0499;AMR_AF=0.0115;AN=2542;CIEND=0,1;CIPOS=0,1;CS=DEL_union;EAS_AF=0.0079;END=145055137;EUR_AF=0.0144;MC=YL_CN_YRI_5665,UW_VH_8229,YL_CN_GWD_5969;NS=2504;SAS_AF=0;SVTYPE=DEL\tGT\t.\nX\t145090496\tUW_VH_23119\tA\t<CN0>\t100\tPASS\tAC=17;AF=0.0442384;AFR_AF=0.0429;AMR_AF=0.0382;AN=2542;CIEND=0,124;CIPOS=-110,0;CS=DEL_union;EAS_AF=0.0445;END=145091939;EUR_AF=0.0509;NS=2504;SAS_AF=0.0432;SVTYPE=DEL\tGT\t.\nX\t145116600\tDEL_pindel_54796\tAATATGTGTTATCAAACACATATTAATGTATATGTGTTATCAAACACATATTAATGTATATGTGTTATCAAACACATATTAATGT\tA\t.\tPASS\tAC=1131;AF=0.299603;AFR_AF=0.2871;AMR_AF=0.3015;AN=3775;CS=DEL_pindel;EAS_AF=0.2945;END=145116684;EUR_AF=0.2898;NS=2504;SAS_AF=0.3315;SVTYPE=DEL\tGT\t1\nX\t145124596\tBI_GS_DEL1_B3_P3043_10\tA\t<CN0>\t100\tPASS\tAC=10;AF=0.00264901;AFR_AF=0.004;AMR_AF=0.0019;AN=2542;CIEND=-30,31;CIPOS=-30,31;CS=DEL_union;EAS_AF=0;END=145135079;EUR_AF=0.0065;MC=YL_CN_ESN_4518,UW_VH_13809;NS=2504;SAS_AF=0;SVTYPE=DEL\tGT\t.\nX\t145221989\tBI_GS_DEL1_B1_P3043_147\tG\t<CN0>\t100\tPASS\tAC=7;AF=0.00238411;AFR_AF=0.002;AMR_AF=0;AN=2542;CIEND=-6,7;CIPOS=-6,7;CS=DEL_union;EAS_AF=0;END=145237539;EUR_AF=0.0091;MC=YL_CN_GBR_4595;NS=2504;SAS_AF=0;SVTYPE=DEL\tGT\t.\nX\t145237921\tL1_umary_LINE1_3145\tA\t<INS:ME:LINE1>\t.\tPASS\tAC=7;AF=0.0018543;AFR_AF=0;AMR_AF=0;AN=3775;CS=L1_umary;EAS_AF=0.0092;EUR_AF=0;MEINFO=LINE1,5173,5998,+;NS=2504;SAS_AF=0;SVLEN=825;SVTYPE=LINE1;TSD=null\tGT\t0\nX\t145399382\tUW_VH_5377\tC\t<CN0>\t100\tPASS\tAC=21;AF=0.0437086;AFR_AF=0.0518;AMR_AF=0.0439;AN=2542;CIEND=0,236;CIPOS=-333,0;CS=DEL_union;EAS_AF=0.0366;END=145401050;EUR_AF=0.0535;MC=BI_GS_DEL1_B2_P3043_201,YL_CN_CEU_5509;NS=2504;SAS_AF=0.0292;SVTYPE=DEL\tGT\t.\nX\t145404316\tBI_GS_DEL1_B4_P3043_69\tC\t<CN0>\t100\tPASS\tAC=8;AF=0.00264901;AFR_AF=0.002;AMR_AF=0.0019;AN=2542;CIEND=-5,5;CIPOS=-5,5;CS=DEL_union;EAS_AF=0;END=145422276;EUR_AF=0.0052;MC=YL_CN_STU_4688;NS=2504;SAS_AF=0.0042;SVTYPE=DEL\tGT\t.\nX\t145509550\tDEL_pindel_54808\tTCCATGTGCCACTTTGCTCTGTGACCTCATATCCTACGACTTTCCTACCTAGTTTCATGGAATCTTGCCATATTATTCTCTTTTGTTGTTACTTACAGACAATAGGCATGTTATTGCCTTGTGGCTCTTGCTTGCATTAGCTGTTCTCTTATTTTGGAATGTTCTTCCTTTAGATATCTACATGGTTCATTTATTCACTTCCTTTACATATTTACTTAAATGTCAGTGAGACCTTCTCGAGCTACCTCATCTAAAATGGCAACTCCCACACCACCCTTCTTCTCCCTGGTATATTTTTCTCCATAGCCTTTTGCACCATCATCTAACGTCCTCTATATTCAACTTATATTGCCACTATGTGTCTCCTCTGCTACCATTTAAGCTCCAGGAGAGTAAGGATTATTGTTTATTTGTTTATTACTTTATCTCTAAGGTCTAGAAGAGCATCCGGTGTATAGTAAGCACATAATGAATATTTATATTAGTTAGGATCTAGATTTGGTTGCTAGAATAGAGACCCAAAGTTAAGAGTGGCTTAAACAAGATTAAAGTGTTTTTTTTTTCTCACATAACAGGCTTGATGTGAAAAATTAATGGCTGCTGTAAGTGATACACAGGGTCAGAGACTCAGATTCCTTCTCTCTTATTATCCTCCTGTTTTTAATGTACTGAATCAGACAGCATGGTCCAACATGGCTCACCACTTCACTAAGTCTTTATTCCGGTGTGAAGCAAAGGGAAAAGAAGGAGGAGGTGACCCTTCCACTCACATCCCATTGTCCATATCTTTATCACACTGTCACACATTGTCTGAAAGGAGGATGAGGCGTAGAGCCTTTATTTCTGGGGATCCCTATG\tT\t.\tPASS\tAC=83;AF=0.0219868;AFR_AF=0.0179;AMR_AF=0.0134;AN=3775;CS=DEL_pindel;EAS_AF=0.0275;END=145510407;EUR_AF=0.0287;NS=2504;SAS_AF=0.0209;SVTYPE=DEL\tGT\t0\nX\t145526507\tDEL_pindel_54809\tTAAGAAAATTTCAGGCCGGGCGTGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCATGGTAGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCGCGCCACTGCACTCCAGCCTGGGCGACAGAGCAAGACTCCGTCTCAAAAAAAAAAAAAAAAAAA\tT\t.\tPASS\tAC=1089;AF=0.288477;AFR_AF=0.2762;AMR_AF=0.271;AN=3775;CS=DEL_pindel;EAS_AF=0.288;END=145526819;EUR_AF=0.2794;MEINFO=AluYc1,1,281,+;NS=2504;SAS_AF=0.3287;SVTYPE=DEL_ALU\tGT\t1\nX\t145539119\tALU_umary_ALU_12819\tC\t<INS:ME:ALU>\t.\tPASS\tAC=229;AF=0.0606623;AFR_AF=0.0738;AMR_AF=0.0401;AN=3775;CS=ALU_umary;EAS_AF=0.0772;EUR_AF=0.0744;MEINFO=AluYa5,1,277,+;NS=2504;SAS_AF=0.0251;SVLEN=276;SVTYPE=ALU;TSD=AAAACTTCACCTATC\tGT\t0\nX\t145727200\tDEL_pindel_54812\tTATATATATACATATATATATATATATATATACATATATATATATATATACATATATATATATATATGTATATATATATATATATATAG\tT\t.\tPASS\tAC=773;AF=0.204768;AFR_AF=0.2024;AMR_AF=0.2137;AN=3775;CS=DEL_pindel;EAS_AF=0.1872;END=145727288;EUR_AF=0.2102;NS=2504;SAS_AF=0.2145;SVTYPE=DEL\tGT\t0\nX\t145758649\tALU_umary_ALU_12820\tC\t<INS:ME:ALU>\t.\tPASS\tAC=13;AF=0.00344371;AFR_AF=0.013;AMR_AF=0;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0;MEINFO=AluYa5,2,279,+;NS=2504;SAS_AF=0;SVLEN=277;SVTYPE=ALU;TSD=null\tGT\t0\nX\t145882153\tDUP_gs.X_CNV_X_145882153_145967775\tA\t<CN0>,<CN2>\t.\tPASS\tAC=0,1;AF=0,0.0002649;AFR_AF=0,0;AMR_AF=0,0;AN=3775;CS=DUP_gs;EAS_AF=0,0;END=145967775;EUR_AF=0,0;NS=2504;SAS_AF=0,0.0014;SVTYPE=DUP\tGT\t0\nX\t146038209\tBI_GS_DEL1_B4_P3044_5\tA\t<CN0>\t100\tPASS\tAC=147;AF=0.0566887;AFR_AF=0.1934;AMR_AF=0.0191;AN=2542;CIEND=0,1;CIPOS=0,1;CS=DEL_union;EAS_AF=0.0013;END=146041733;EUR_AF=0.0117;MC=EM_DL_DEL107288,UW_VH_8700,YL_CN_LWK_4301,UW_VH_13092,YL_CN_MSL_4121;NS=2504;SAS_AF=0;SVTYPE=DEL\tGT\t.\nX\t146119815\tDUP_gs.X_CNV_X_146119815_146131909\tT\t<CN0>,<CN2>\t.\tPASS\tAC=2,12;AF=0.0005298,0.00317881;AFR_AF=0.002,0.012;AMR_AF=0,0;AN=3775;CS=DUP_gs;EAS_AF=0,0;END=146131909;EUR_AF=0,0;NS=2504;SAS_AF=0,0;SVTYPE=CNV\tGT\t0\nX\t146169503\tDEL_pindel_54819\tCCCCAGCCCTGGGTGGATCCAGAAGTGCAGTCTGGGAGTCAGGACCTAGAGTCAAAAACTTTAGAAGCGGCACCCAAACCACAGGATGCAGTCCTTCCCACTCTTCCATCTCCTTTCCAAACGCAGAGGAGCCTCACCCCATAGTCACTGCCAACCCCAGCCACAAGGAGTACTGCCAGATTACCACTGATGTTCCTATAAGGCCCGAGGTCTCTTATGTCAGCTTGTGGTGAATG\tC\t.\tPASS\tAC=1232;AF=0.326358;AFR_AF=0.3081;AMR_AF=0.3683;AN=3775;CS=DEL_pindel;EAS_AF=0.3168;END=146169738;EUR_AF=0.3068;NS=2504;SAS_AF=0.3524;SVTYPE=DEL\tGT\t1\nX\t146179855\tBI_GS_DEL1_B2_P3044_81\tA\t<CN0>\t100\tPASS\tAC=29;AF=0.0111258;AFR_AF=0.003;AMR_AF=0.0019;AN=2542;CIEND=-12,12;CIPOS=-12,12;CS=DEL_union;EAS_AF=0;END=146185929;EUR_AF=0.0104;MC=EM_DL_DEL107289,YL_CN_CEU_5510,UW_VH_3669;NS=2504;SAS_AF=0.0418;SVTYPE=DEL\tGT\t.\nX\t146253811\tBI_GS_DEL1_B2_P3044_118\tA\t<CN0>\t100\tPASS\tAC=113;AF=0.153113;AFR_AF=0.1565;AMR_AF=0.166;AN=2542;CIEND=-33,33;CIPOS=-33,33;CS=DEL_union;EAS_AF=0.1584;END=146254811;EUR_AF=0.1488;NS=2504;SAS_AF=0.1379;SVTYPE=DEL\tGT\t.\nX\t146340753\tBI_GS_DEL1_B5_P3044_236\tA\t<CN0>\t100\tPASS\tAC=8;AF=0.00264901;AFR_AF=0.006;AMR_AF=0.0019;AN=2542;CIEND=-11,11;CIPOS=-11,11;CS=DEL_union;EAS_AF=0;END=146346040;EUR_AF=0.0039;MC=YL_CN_ASW_4640;NS=2504;SAS_AF=0;SVTYPE=DEL\tGT\t.\nX\t146374337\tBI_GS_DEL1_B3_P3044_16\tA\t<CN0>\t100\tPASS\tAC=11;AF=0.00370861;AFR_AF=0.002;AMR_AF=0;AN=2542;CIEND=-4,5;CIPOS=-4,5;CS=DEL_union;EAS_AF=0;END=146381726;EUR_AF=0.0039;NS=2504;SAS_AF=0.0125;SVTYPE=DEL\tGT\t.\nX\t146374388\tBI_GS_DEL1_B3_P3044_15\tT\t<CN0>\t100\tPASS\tAC=14;AF=0.00715232;AFR_AF=0.004;AMR_AF=0.0019;AN=2542;CIEND=-48,49;CIPOS=-48,49;CS=DEL_union;EAS_AF=0.0026;END=146378041;EUR_AF=0.0065;NS=2504;SAS_AF=0.0209;SVTYPE=DEL\tGT\t.\nX\t146425255\tUW_VH_15746\tC\t<CN0>\t100\tPASS\tAC=36;AF=0.0545695;AFR_AF=0.0708;AMR_AF=0.0458;AN=2542;CIEND=0,130;CIPOS=-252,0;CS=DEL_union;EAS_AF=0.0602;END=146426939;EUR_AF=0.0457;MC=BI_GS_DEL1_B3_P3044_21;NS=2504;SAS_AF=0.0418;SVTYPE=DEL\tGT\t.\nX\t146430505\tDEL_pindel_54826\tTTATATATATAATATATATATATATATATATATATATATATATATATATATATATATA\tT\t.\tPASS\tAC=869;AF=0.230199;AFR_AF=0.2164;AMR_AF=0.2481;AN=3775;CS=DEL_pindel;EAS_AF=0.195;END=146430562;EUR_AF=0.2728;NS=2504;SAS_AF=0.2284;SVTYPE=DEL\tGT\t0\nX\t146459618\tL1_umary_LINE1_3146\tG\t<INS:ME:LINE1>\t.\tPASS\tAC=2;AF=0.0005298;AFR_AF=0;AMR_AF=0;AN=3775;CS=L1_umary;EAS_AF=0.0026;EUR_AF=0;MEINFO=LINE1,527,5981,-;NS=2504;SAS_AF=0;SVLEN=5454;SVTYPE=LINE1;TSD=null\tGT\t0\nX\t146559239\tDEL_pindel_54828\tTAAGAAGCTAAACAACACCAGCATGGCACATGTATACATATGTAACTAACCTGCACAATGTGCACATGTACCCTAAAACTTAGAGTATAATAAAAAAAAAAAAAAAA\tT\t.\tPASS\tAC=2440;AF=0.646358;AFR_AF=0.5932;AMR_AF=0.6718;AN=3775;CS=DEL_pindel;EAS_AF=0.6911;END=146559345;EUR_AF=0.6606;MEINFO=LINE1,5958,5973,+;NS=2504;SAS_AF=0.6393;SVTYPE=DEL_LINE1\tGT\t1\nX\t146570325\tYL_CN_PUR_5763\tA\t<CN0>\t100\tPASS\tAC=26;AF=0.0701987;AFR_AF=0.0518;AMR_AF=0.0802;AN=2542;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0.0864;END=146572510;EUR_AF=0.0809;MC=BI_GS_DEL1_B1_P3044_308;NS=2504;SAS_AF=0.0599;SVTYPE=DEL\tGT\t.\nX\t146683080\tDEL_pindel_54831\tCTGCCAGTAATTTATAACTATTTTCTCATCTTTACAGATGAGGACAGTGAGGCTCAAATATTATTTCAAGTCCAAGGATGTAGCGTTTACACATGTATCAAATTATCACACTGTACACTTTGAATATATACAATCTTTGTCAATTAAATATTTTTAAGTAACAATAAATAAAAAAACTCCAAAGCAAATCTGGATAAGACTTAAGTGATAAAAGGATGAAAAAAATAGCCTTCCAGACTGGGTACAAAATATTGTGGTAGGTTACACTTCGGAAGATAAACTGTGAAAAGAAAATACATTCTTATCTCAAGGAATAGTTGAACTATTCAACTAGAGAAAGCTAATGAAGTTAGAGCTAGACATGAAAAAGAGAATGCCAGAGGCCCCTTTTTTTTTTTTTTTTTTTTTTTTTAAGGAATGAACATCCTTTGAAACAAAAAAGATGAACGTTAGTT\tC\t.\tPASS\tAC=1161;AF=0.30755;AFR_AF=0.2891;AMR_AF=0.3149;AN=3775;CS=DEL_pindel;EAS_AF=0.3076;END=146683534;EUR_AF=0.2872;NS=2504;SAS_AF=0.3496;SVTYPE=DEL\tGT\t1\nX\t146756968\tDEL_pindel_54833\tGAGTTTGGGGGCCTCAGAAGACAGGAAGATGAAGGAAAGTTTGAAACTTCTTACAGACTGGTTA\tG\t.\tPASS\tAC=1090;AF=0.288742;AFR_AF=0.2792;AMR_AF=0.292;AN=3775;CS=DEL_pindel;EAS_AF=0.2814;END=146757031;EUR_AF=0.2781;NS=2504;SAS_AF=0.3189;SVTYPE=DEL\tGT\t0\nX\t146782399\tBI_GS_DEL1_B4_P3044_100\tT\t<CN0>\t100\tPASS\tAC=13;AF=0.0309934;AFR_AF=0.0239;AMR_AF=0.0401;AN=2542;CIEND=-19,20;CIPOS=-19,20;CS=DEL_union;EAS_AF=0.0288;END=146783836;EUR_AF=0.0431;NS=2504;SAS_AF=0.0237;SVTYPE=DEL\tGT\t.\nX\t146843691\tBI_GS_DEL1_B4_P3044_113\tT\t<CN0>\t100\tPASS\tAC=37;AF=0.0137748;AFR_AF=0.0459;AMR_AF=0.0019;AN=2542;CIEND=-33,33;CIPOS=-33,33;CS=DEL_union;EAS_AF=0;END=146849792;EUR_AF=0.0065;MC=UW_VH_12219,YL_CN_ESN_4521;NS=2504;SAS_AF=0;SVTYPE=DEL\tGT\t.\nX\t146849495\tDEL_pindel_54838\tAGTCTCACGAAATCTGATGGTTTTATAGGCGTCCGGCATTTCCCTTGCTTGAGCTCGCTCTGCCCAGCTGCCCTGTGAAGAAGGTGCCTGCTTCTCCTTTGCCTTCCGCCATGATTGTAAGTTTCTTGAGGCTTCGTCAGCAATGCGGAACTGTGAGTCAATTAAACCTCTTTCCTTTATAAATTACCCAGTCTCGGGTATTTCTTTATAGCAGAGTGAGAATGGACTAATACAAAGGTTTTGTGTGAATATACGTTTCGTTTTCATCCCTCTGGGATAATTACTCAAGAGTGCAAATTTTGGGTTGTATGGTAGTT\tA\t.\tPASS\tAC=1246;AF=0.330066;AFR_AF=0.338;AMR_AF=0.3206;AN=3775;CS=DEL_pindel;EAS_AF=0.3181;END=146849811;EUR_AF=0.3094;NS=2504;SAS_AF=0.3607;SVTYPE=DEL\tGT\t1\nX\t146849941\tDEL_pindel_54839\tCATTGCAGCCATTCTGATAAGTACGTGGTGTTATCTCATAGTGGTTTTAATGTGCACTTTCTTAATGGCTAATAATTTTTT\tC\t.\tPASS\tAC=1209;AF=0.320265;AFR_AF=0.3001;AMR_AF=0.3111;AN=3775;CS=DEL_pindel;EAS_AF=0.301;END=146850021;EUR_AF=0.3107;NS=2504;SAS_AF=0.3858;SVTYPE=DEL\tGT\t1\nX\t146851055\tALU_umary_ALU_12821\tT\t<INS:ME:ALU>\t.\tPASS\tAC=9;AF=0.00238411;AFR_AF=0;AMR_AF=0.0019;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0.0104;MEINFO=AluUndef,5,278,-;NS=2504;SAS_AF=0;SVLEN=273;SVTYPE=ALU;TSD=AATGGTATTGTTTTT\tGT\t0\nX\t146983498\tBI_GS_DEL1_B3_P3044_46\tA\t<CN0>\t100\tPASS\tAC=45;AF=0.0754967;AFR_AF=0.0808;AMR_AF=0.0725;AN=2542;CIEND=-5,6;CIPOS=-5,6;CS=DEL_union;EAS_AF=0.0746;END=146985520;EUR_AF=0.0561;MC=YL_CN_PJL_5130;NS=2504;SAS_AF=0.0919;SVTYPE=DEL\tGT\t.\nX\t147037833\tALU_umary_ALU_12822\tT\t<INS:ME:ALU>\t.\tPASS\tAC=5;AF=0.0013245;AFR_AF=0.005;AMR_AF=0;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0;MEINFO=AluUndef,1,281,-;NS=2504;SAS_AF=0;SVLEN=280;SVTYPE=ALU;TSD=null\tGT\t0\nX\t147192263\tBI_GS_DEL1_B4_P3045_29\tG\t<CN0>\t100\tPASS\tAC=7;AF=0.0018543;AFR_AF=0.002;AMR_AF=0.0019;AN=2542;CIEND=-29,29;CIPOS=-29,29;CS=DEL_union;EAS_AF=0;END=147203418;EUR_AF=0.0052;NS=2504;SAS_AF=0;SVTYPE=DEL\tGT\t.\nX\t147194081\tALU_umary_ALU_12823\tA\t<INS:ME:ALU>\t.\tPASS\tAC=3;AF=0.0007947;AFR_AF=0;AMR_AF=0;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0;MEINFO=AluUndef,1,281,+;NS=2504;SAS_AF=0.0042;SVLEN=280;SVTYPE=ALU;TSD=AAATATTAACTTGTA\tGT\t0\nX\t147434332\tDEL_pindel_54844\tGCTAGGAAAGGGAATTCCCTGACCCCTTGCACTTCCCGGGTGAGGCGATGCCTCGCCCTGCTTTGGCTCATGCT\tG\t.\tPASS\tAC=432;AF=0.114437;AFR_AF=0.0877;AMR_AF=0.1527;AN=3775;CS=DEL_pindel;EAS_AF=0.1545;END=147434405;EUR_AF=0.107;NS=2504;SAS_AF=0.0891;SVTYPE=DEL\tGT\t1\nX\t147494550\tALU_umary_ALU_12824\tA\t<INS:ME:ALU>\t.\tPASS\tAC=1;AF=0.0002649;AFR_AF=0;AMR_AF=0;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0;MEINFO=AluUndef,28,281,+;NS=2504;SAS_AF=0.0014;SVLEN=253;SVTYPE=ALU;TSD=null\tGT\t0\nX\t147509695\tBI_GS_DEL1_B1_P3045_318\tT\t<CN0>\t100\tPASS\tAC=1623;AF=0.635762;AFR_AF=0.5095;AMR_AF=0.792;AN=2542;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.8521;END=147511237;EUR_AF=0.6371;MC=YL_CN_CDX_3906,YL_CN_PEL_4410,YL_CN_IBS_4166,YL_CN_CHB_4751,YL_CN_ASW_4642,EM_DL_DEL101194266,YL_CN_YRI_5668,UW_VH_1323,YL_CN_GIH_3507,YL_CN_KHV_5104,YL_CN_PUR_5764,YL_CN_TSI_4486,YL_CN_FIN_4377,YL_CN_ESN_4522;NS=2504;SAS_AF=0.4666;SVTYPE=DEL\tGT\t.\nX\t147948687\tBI_GS_DEL1_B3_P3045_27\tT\t<CN0>\t100\tPASS\tAC=6;AF=0.0018543;AFR_AF=0.003;AMR_AF=0.0019;AN=2542;CIEND=-27,27;CIPOS=-27,27;CS=DEL_union;EAS_AF=0;END=147955501;EUR_AF=0.0039;MC=YL_CN_ESN_4523;NS=2504;SAS_AF=0;SVTYPE=DEL\tGT\t.\nX\t148287176\tDUP_gs.X_CNV_X_148287176_148374732\tA\t<CN0>,<CN2>\t.\tPASS\tAC=0,1;AF=0,0.0002649;AFR_AF=0,0;AMR_AF=0,0;AN=3775;CS=DUP_gs;EAS_AF=0,0.0013;END=148374732;EUR_AF=0,0;NS=2504;SAS_AF=0,0;SVTYPE=DUP\tGT\t0\nX\t148303489\tDEL_pindel_54863\tTACCTGGAGGTCTGAAAACTCCTCTGGGGCTTATGAATTCCTGGGTTCAGGCAAAGGCCTTGCCACTATAAATCTGGCTTACAAGCTCTCCAAGCTC\tT\t.\tPASS\tAC=66;AF=0.0174834;AFR_AF=0.006;AMR_AF=0.0191;AN=3775;CS=DEL_pindel;EAS_AF=0.0223;END=148303585;EUR_AF=0.03;NS=2504;SAS_AF=0.0139;SVTYPE=DEL\tGT\t0\nX\t148539115\tALU_umary_ALU_12825\tC\t<INS:ME:ALU>\t.\tPASS\tAC=233;AF=0.0617219;AFR_AF=0.2144;AMR_AF=0.0191;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0.0091;MEINFO=AluUndef,1,281,+;NS=2504;SAS_AF=0.0014;SVLEN=280;SVTYPE=ALU;TSD=AGAACTCTC\tGT\t0\nX\t148579845\tDUP_gs.X_CNV_X_148579845_148630997\tA\t<CN0>,<CN2>\t.\tPASS\tAC=0,2;AF=0,0.0005298;AFR_AF=0,0;AMR_AF=0,0;AN=3775;CS=DUP_gs;EAS_AF=0,0.0026;END=148630997;EUR_AF=0,0;NS=2504;SAS_AF=0,0;SVTYPE=DUP\tGT\t0\nX\t148640196\tDUP_gs.X_CNV_X_148640196_148654619\tT\t<CN0>,<CN2>\t.\tPASS\tAC=76,3;AF=0.0201325,0.0007947;AFR_AF=0.0628,0;AMR_AF=0.0057,0;AN=3775;CS=DUP_gs;EAS_AF=0.0065,0.0026;END=148654619;EUR_AF=0.0026,0.0013;NS=2504;SAS_AF=0.0042,0;SVTYPE=CNV\tGT\t0\nX\t148685833\tDUP_gs.X_CNV_X_148685833_148739727\tT\t<CN0>,<CN2>\t.\tPASS\tAC=1,3;AF=0.0002649,0.0007947;AFR_AF=0,0.002;AMR_AF=0,0;AN=3775;CS=DUP_gs;EAS_AF=0,0.0013;END=148739727;EUR_AF=0,0;NS=2504;SAS_AF=0.0014,0;SVTYPE=CNV\tGT\t0\nX\t148762813\tDUP_gs.X_CNV_X_148762813_148775448\tG\t<CN0>,<CN2>\t.\tPASS\tAC=0,2;AF=0,0.0005298;AFR_AF=0,0;AMR_AF=0,0;AN=3775;CS=DUP_gs;EAS_AF=0,0.0026;END=148775448;EUR_AF=0,0;NS=2504;SAS_AF=0,0;SVTYPE=DUP\tGT\t0\nX\t148771685\tDUP_gs.X_CNV_X_148771685_148811274\tT\t<CN0>,<CN2>\t.\tPASS\tAC=0,1;AF=0,0.0002649;AFR_AF=0,0;AMR_AF=0,0;AN=3775;CS=DUP_gs;EAS_AF=0,0.0013;END=148811274;EUR_AF=0,0;NS=2504;SAS_AF=0,0;SVTYPE=DUP\tGT\t0\nX\t148803850\tBI_GS_DEL1_B5_P3046_644\tC\t<CN0>\t100\tPASS\tAC=47;AF=0.04;AFR_AF=0.0897;AMR_AF=0.0248;AN=2542;CIEND=-16,17;CIPOS=-16,17;CS=DEL_union;EAS_AF=0.0144;END=148831837;EUR_AF=0.0379;NS=2504;SAS_AF=0.0111;SVTYPE=DEL\tGT\t.\nX\t148831648\tYL_CN_MSL_4127\tT\t<CN0>\t100\tPASS\tAC=29;AF=0.0108609;AFR_AF=0.0289;AMR_AF=0.0115;AN=2542;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0.0013;END=148836056;EUR_AF=0.0065;NS=2504;SAS_AF=0;SVTYPE=DEL\tGT\t.\nX\t148848506\tDUP_gs.X_CNV_X_148848506_148902086\tT\t<CN0>,<CN2>\t.\tPASS\tAC=1,80;AF=0.0002649,0.021192;AFR_AF=0,0.0658;AMR_AF=0,0.0057;AN=3775;CS=DUP_gs;EAS_AF=0,0.0079;END=148902086;EUR_AF=0.0013,0.0026;NS=2504;SAS_AF=0,0.0042;SVTYPE=CNV\tGT\t0\nX\t148957595\tDUP_gs.X_CNV_X_148957595_148998958\tA\t<CN0>,<CN2>\t.\tPASS\tAC=4,81;AF=0.0010596,0.0214569;AFR_AF=0,0.0658;AMR_AF=0,0.0057;AN=3775;CS=DUP_gs;EAS_AF=0.0039,0.0092;END=148998958;EUR_AF=0.0013,0.0026;NS=2504;SAS_AF=0,0.0042;SVTYPE=CNV\tGT\t0\nX\t149006503\tDEL_pindel_54866\tCCAATGGCTGCCCTTAGTGACTTTCTTTTATAAAGCACAATACAGAAAGGGGGGAATGTAATAACCTTG\tC\t.\tPASS\tAC=1310;AF=0.34702;AFR_AF=0.3998;AMR_AF=0.3187;AN=3775;CS=DEL_pindel;EAS_AF=0.3207;END=149006571;EUR_AF=0.3107;NS=2504;SAS_AF=0.3607;SVTYPE=DEL\tGT\t1\nX\t149084379\tDEL_pindel_54867\tTTGGATTGAGGAAGATCACTTTTGAGACCCCATCCTAAGAAAAATAATTCAAGACGAGCACTAAATGAAATTGATCACTACAATGTTAAATATAATTGTGAAAAATGGGATGATCTAAATGTCTAATGAGAAGAAAACTGATATGTGAATATACTAGAATGGTCTATTCAATATGGAAAATACATCATTGTACTAAGTGAAAGAAGCTTAATGCAAAGTTGACTTCATGCTCTGGTTATAAGTGTGTACTATACCCATTATTATCTTTGTTTTGCAAATTCTTCATCCG\tT\t.\tPASS\tAC=49;AF=0.0129801;AFR_AF=0.002;AMR_AF=0.0286;AN=3775;CS=DEL_pindel;EAS_AF=0.0118;END=149084667;EUR_AF=0.0157;NS=2504;SAS_AF=0.0153;SVTYPE=DEL\tGT\t0\nX\t149236087\tBI_GS_DEL1_B3_P3047_10\tT\t<CN0>\t100\tPASS\tAC=62;AF=0.0672848;AFR_AF=0.1077;AMR_AF=0.0668;AN=2542;CIEND=-59,59;CIPOS=-59,59;CS=DEL_union;EAS_AF=0.034;END=149239411;EUR_AF=0.0509;NS=2504;SAS_AF=0.0641;SVTYPE=DEL\tGT\t.\nX\t149240944\tDUP_gs.X_CNV_X_149240944_149265118\tA\t<CN0>,<CN2>\t.\tPASS\tAC=0,1;AF=0,0.0002649;AFR_AF=0,0;AMR_AF=0,0.0019;AN=3775;CS=DUP_gs;EAS_AF=0,0;END=149265118;EUR_AF=0,0;NS=2504;SAS_AF=0,0;SVTYPE=DUP\tGT\t0\nX\t149379029\tL1_umary_LINE1_3147\tG\t<INS:ME:LINE1>\t.\tPASS\tAC=1;AF=0.0002649;AFR_AF=0.001;AMR_AF=0;AN=3775;CS=L1_umary;EAS_AF=0;EUR_AF=0;MEINFO=LINE1,3,5936,+;NS=2504;SAS_AF=0;SVLEN=5933;SVTYPE=LINE1;TSD=null\tGT\t0\nX\t149451325\tALU_umary_ALU_12826\tG\t<INS:ME:ALU>\t.\tPASS\tAC=941;AF=0.249272;AFR_AF=0.2891;AMR_AF=0.2882;AN=3775;CS=ALU_umary;EAS_AF=0.1859;EUR_AF=0.2023;MEINFO=AluUndef,1,281,+;NS=2504;SAS_AF=0.2827;SVLEN=280;SVTYPE=ALU;TSD=AACAAGATAGCGAGAGGTTG\tGT\t0\nX\t149494721\tALU_umary_ALU_12827\tG\t<INS:ME:ALU>\t.\tPASS\tAC=1;AF=0.0002649;AFR_AF=0;AMR_AF=0;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0;MEINFO=AluY,28,246,+;NS=2504;SAS_AF=0.0014;SVLEN=218;SVTYPE=ALU;TSD=null\tGT\t0\nX\t149549314\tDEL_pindel_54872\tTTACAAATGTTCATCTTGCTCCAGTGATTTGAAAAGTCACCATTATTATATATTC\tT\t.\tPASS\tAC=1081;AF=0.286358;AFR_AF=0.2702;AMR_AF=0.2805;AN=3775;CS=DEL_pindel;EAS_AF=0.2866;END=149549368;EUR_AF=0.2715;NS=2504;SAS_AF=0.3287;SVTYPE=DEL\tGT\t1\nX\t149551136\tDEL_pindel_54873\tTTGTCCCATTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTATTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGACTGCAGTGGCGCGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCACGCCCGGCTAATTTCTTGTATTTTTAGTAGAGACGGGGTTTCACCGTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCCC\tT\t.\tPASS\tAC=2120;AF=0.561589;AFR_AF=0.6381;AMR_AF=0.4981;AN=3775;CS=DEL_pindel;EAS_AF=0.5196;END=149551472;EUR_AF=0.577;MEINFO=AluY,1,281,-;NS=2504;SAS_AF=0.5292;SVTYPE=DEL_ALU\tGT\t0\nX\t149927786\tBI_GS_DEL1_B3_P3047_32\tG\t<CN0>\t100\tPASS\tAC=128;AF=0.12;AFR_AF=0.0847;AMR_AF=0.1412;AN=2542;CIEND=-26,26;CIPOS=-26,26;CS=DEL_union;EAS_AF=0.0641;END=149928796;EUR_AF=0.2141;MC=UW_VH_2962;NS=2504;SAS_AF=0.1128;SVTYPE=DEL\tGT\t.\nX\t150268163\tBI_GS_DEL1_B5_P3048_219\tC\t<CN0>\t100\tPASS\tAC=299;AF=0.118146;AFR_AF=0.1077;AMR_AF=0.0363;AN=2542;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.1702;END=150270796;EUR_AF=0.0274;MC=UW_VH_6479,YL_CN_LWK_4308,YL_CN_CDX_3911,UW_VH_3425,EM_DL_DEL107318;NS=2504;SAS_AF=0.234;SVTYPE=DEL\tGT\t.\nX\t150293934\tBI_GS_DEL1_B4_P3048_39\tA\t<CN0>\t100\tPASS\tAC=578;AF=0.255629;AFR_AF=0.2971;AMR_AF=0.2271;AN=2542;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.0877;END=150295714;EUR_AF=0.4138;MC=YL_CN_PUR_5767,YL_CN_GWD_5979,YL_CN_TSI_4491,YL_CN_CEU_5515,UW_VH_1940,EM_DL_DEL101194958;NS=2504;SAS_AF=0.2284;SVTYPE=DEL\tGT\t.\nX\t150317479\tDEL_pindel_54874\tCACTATCACGAGAACAGCATGGGGGAAACCTCCTCCATGATCTGATTACCTCCACCTGGTCCCTCCTTGACATGTGTGGATTAAAATTCAAGATGAGATTTTGGGTGGGGACACAGCCACCT\tC\t.\tPASS\tAC=160;AF=0.0423841;AFR_AF=0.0209;AMR_AF=0.0515;AN=3775;CS=DEL_pindel;EAS_AF=0.0497;END=150317600;EUR_AF=0.0522;NS=2504;SAS_AF=0.0474;SVTYPE=DEL\tGT\t0\nX\t150386183\tALU_umary_ALU_12828\tT\t<INS:ME:ALU>\t.\tPASS\tAC=4;AF=0.0010596;AFR_AF=0;AMR_AF=0;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0;MEINFO=AluUndef,2,281,-;NS=2504;SAS_AF=0.0056;SVLEN=279;SVTYPE=ALU;TSD=null\tGT\t0\nX\t150420005\tDEL_pindel_54876\tATTATGGTTAAATTGAAGCCAGACATTAGCTATGGATACAAGAGCTTAGGAAAAATTAATTAAAGTATTCTGGGAGAATCAATTAGCCATATGGAATTTATAATAAAGAGTATTGTATATTTTATCAGTATTTGTAACTTGTGTGCTACACATTATTTACCAATAAAAATATTCTATAAAAATATACTAGCATACCACTACTGTGAGAGAGAAAGCATTTCCTGCAGATAAAACCATTGTTAAATAACTCTAGCAAACAAATGCAGAGTAAATGTTTAAAGACTCAGGATTTATTTTTATTTTAGACTTACTTCTCCAGTTATCTCAATCTTAAAACTCAATTTTTAGGTCACAAAGTCAAACTCTTGTCT\tA\t.\tPASS\tAC=1099;AF=0.291126;AFR_AF=0.2672;AMR_AF=0.2977;AN=3775;CS=DEL_pindel;EAS_AF=0.2906;END=150420375;EUR_AF=0.2872;NS=2504;SAS_AF=0.3245;SVTYPE=DEL\tGT\t1\nX\t150537389\tALU_umary_ALU_12829\tC\t<INS:ME:ALU>\t.\tPASS\tAC=16;AF=0.00423841;AFR_AF=0.016;AMR_AF=0;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0;MEINFO=AluYb7_2,1,278,+;NS=2504;SAS_AF=0;SVLEN=277;SVTYPE=ALU;TSD=null\tGT\t0\nX\t150585730\tUW_VH_18452\tC\t<CN0>\t100\tPASS\tAC=28;AF=0.0683444;AFR_AF=0.0518;AMR_AF=0.0668;AN=2542;CIEND=0,243;CIPOS=-69,0;CS=DEL_union;EAS_AF=0.0641;END=150586802;EUR_AF=0.0888;MC=EM_DL_DEL101195026,BI_GS_DEL1_B3_P3048_19;NS=2504;SAS_AF=0.0752;SVTYPE=DEL\tGT\t.\nX\t150707071\tUW_VH_2282\tG\t<CN0>\t100\tPASS\tAC=203;AF=0.077351;AFR_AF=0.1974;AMR_AF=0.0363;AN=2542;CIEND=0,373;CIPOS=-363,0;CS=DEL_union;EAS_AF=0.0079;END=150712355;EUR_AF=0.0392;MC=BI_GS_DEL1_B4_P3048_107,YL_CN_PUR_5769,YL_CN_FIN_4381,EM_DL_DEL107333;NS=2504;SAS_AF=0.0543;SVTYPE=DEL\tGT\t.\nX\t150711379\tBI_GS_DEL1_B2_P3048_368\tT\t<CN0>\t100\tPASS\tAC=257;AF=0.204503;AFR_AF=0.336;AMR_AF=0.1641;AN=2542;CIEND=-1,1;CIPOS=-1,1;CS=DEL_union;EAS_AF=0.1374;END=150712579;EUR_AF=0.158;MC=UW_VH_8732;NS=2504;SAS_AF=0.1713;SVTYPE=DEL\tGT\t.\nX\t150826291\tDUP_gs.X_CNV_X_150826291_150834971\tT\t<CN0>,<CN2>\t.\tPASS\tAC=0,1;AF=0,0.0002649;AFR_AF=0,0;AMR_AF=0,0;AN=3775;CS=DUP_gs;EAS_AF=0,0;END=150834971;EUR_AF=0,0.0013;NS=2504;SAS_AF=0,0;SVTYPE=DUP\tGT\t0\nX\t150876871\tUW_VH_8733\tG\t<CN0>\t100\tPASS\tAC=61;AF=0.0500662;AFR_AF=0.0837;AMR_AF=0.0496;AN=2542;CIEND=0,355;CIPOS=-284,0;CS=DEL_union;EAS_AF=0.0353;END=150878517;EUR_AF=0.0431;MC=EM_DL_DEL101195083,YL_CN_YRI_5675,BI_GS_DEL1_B5_P3048_699;NS=2504;SAS_AF=0.0265;SVTYPE=DEL\tGT\t.\nX\t150934100\tYL_CN_ACB_5174\tC\t<CN0>\t100\tPASS\tAC=7;AF=0.00211921;AFR_AF=0.004;AMR_AF=0;AN=2542;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0;END=150939459;EUR_AF=0.0052;NS=2504;SAS_AF=0;SVTYPE=DEL\tGT\t.\nX\t150997048\tDEL_pindel_54883\tAGTCCACTTACCCAGAGGCACTGAGTCAGAGTTCCACATCATCCTTGCCCCGGCAGCCAGTCATGTGATCACTCTGATTCCCTGTACAGACCACCCCACCCCTGTCAGAGCCAGACCTCTGCACTTGGATCTAATCTCCATCTGCCTCCTTACCTTTGCTCTACCATTCCTTGTGCCCTGAACCAGAGCCATTCCCTCCTTCAAGCCCAGTTCTTCTCATCTTTTAAG\tA\t.\tPASS\tAC=32;AF=0.00847682;AFR_AF=0.007;AMR_AF=0.0057;AN=3775;CS=DEL_pindel;EAS_AF=0.0118;END=150997275;EUR_AF=0.0065;NS=2504;SAS_AF=0.0111;SVTYPE=DEL\tGT\t0\nX\t151218769\tALU_umary_ALU_12830\tA\t<INS:ME:ALU>\t.\tPASS\tAC=13;AF=0.00344371;AFR_AF=0.011;AMR_AF=0.0038;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0;MEINFO=AluYc1,1,281,+;NS=2504;SAS_AF=0;SVLEN=280;SVTYPE=ALU;TSD=null\tGT\t0\nX\t151261523\tALU_umary_ALU_12831\tT\t<INS:ME:ALU>\t.\tPASS\tAC=7;AF=0.0018543;AFR_AF=0.006;AMR_AF=0.0019;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0;MEINFO=AluUndef,1,281,-;NS=2504;SAS_AF=0;SVLEN=280;SVTYPE=ALU;TSD=null\tGT\t0\nX\t151345023\tL1_umary_LINE1_3148\tA\t<INS:ME:LINE1>\t.\tPASS\tAC=4;AF=0.0010596;AFR_AF=0;AMR_AF=0;AN=3775;CS=L1_umary;EAS_AF=0;EUR_AF=0;MEINFO=LINE1,1079,5879,+;NS=2504;SAS_AF=0.0056;SVLEN=4800;SVTYPE=LINE1;TSD=null\tGT\t0\nX\t151473664\tBI_GS_DEL1_B4_P3049_81\tC\t<CN0>\t100\tPASS\tAC=7;AF=0.00317881;AFR_AF=0.004;AMR_AF=0.0019;AN=2542;CIEND=-44,44;CIPOS=-44,44;CS=DEL_union;EAS_AF=0.0013;END=151477031;EUR_AF=0.0078;MC=YL_CN_CEU_5518;NS=2504;SAS_AF=0;SVTYPE=DEL\tGT\t.\nX\t151565366\tBI_GS_DEL1_B1_P3049_358\tT\t<CN0>\t100\tPASS\tAC=15;AF=0.0296689;AFR_AF=0.0229;AMR_AF=0.0305;AN=2542;CIEND=-3,3;CIPOS=-3,3;CS=DEL_union;EAS_AF=0.0314;END=151566720;EUR_AF=0.0431;NS=2504;SAS_AF=0.0223;SVTYPE=DEL\tGT\t.\nX\t151759240\tUW_VH_21680\tA\t<CN0>\t100\tPASS\tAC=6;AF=0.00211921;AFR_AF=0.002;AMR_AF=0;AN=2542;CIEND=0,106;CIPOS=-147,0;CS=DEL_union;EAS_AF=0.0026;END=151763151;EUR_AF=0.0052;MC=BI_GS_DEL1_B4_P3049_124,YL_CN_JPT_4795;NS=2504;SAS_AF=0;SVTYPE=DEL\tGT\t.\nX\t151831777\tALU_umary_ALU_12832\tT\t<INS:ME:ALU>\t.\tPASS\tAC=29;AF=0.00768212;AFR_AF=0.0279;AMR_AF=0.0019;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0;MEINFO=AluUndef,2,279,-;NS=2504;SAS_AF=0;SVLEN=277;SVTYPE=ALU;TSD=GATTTTGTTCTTTCTT\tGT\t0\nX\t151982308\tDEL_pindel_54892\tATACAATATACACAGATTACCACATACATAGGTGCATGCCTGTCTGTCTCAGAAACGGCC\tA\t.\tPASS\tAC=1249;AF=0.330861;AFR_AF=0.3599;AMR_AF=0.3168;AN=3775;CS=DEL_pindel;EAS_AF=0.3154;END=151982367;EUR_AF=0.299;NS=2504;SAS_AF=0.351;SVTYPE=DEL\tGT\t1\nX\t151982765\tDEL_pindel_54893\tTTGCTAAATCCAGAGGGCAAACTCCAGCCTTCACTAGCTTCACCCAGGTGACCACTTCCTCTCCCTTTGCTTCTG\tT\t.\tPASS\tAC=2424;AF=0.642119;AFR_AF=0.6132;AMR_AF=0.6718;AN=3775;CS=DEL_pindel;EAS_AF=0.6492;END=151982839;EUR_AF=0.6423;NS=2504;SAS_AF=0.6532;SVTYPE=DEL\tGT\t0\nX\t152001805\tALU_umary_ALU_12833\tG\t<INS:ME:ALU>\t.\tPASS\tAC=803;AF=0.212715;AFR_AF=0.331;AMR_AF=0.1355;AN=3775;CS=ALU_umary;EAS_AF=0.1688;EUR_AF=0.1749;MEINFO=AluUndef,1,281,+;NS=2504;SAS_AF=0.1908;SVLEN=280;SVTYPE=ALU;TSD=AAAAGTTATATGTGG\tGT\t0\nX\t152048325\tDUP_gs.X_CNV_X_152048325_152223267\tC\t<CN0>,<CN2>\t.\tPASS\tAC=0,1;AF=0,0.0002649;AFR_AF=0,0;AMR_AF=0,0;AN=3775;CS=DUP_gs;EAS_AF=0,0.0013;END=152223267;EUR_AF=0,0;NS=2504;SAS_AF=0,0;SVTYPE=DUP\tGT\t0\nX\t152093580\tUW_VH_18021\tT\t<CN0>\t100\tPASS\tAC=9;AF=0.00238411;AFR_AF=0.002;AMR_AF=0.0019;AN=2542;CIEND=0,223;CIPOS=-282,0;CS=DEL_union;EAS_AF=0;END=152101608;EUR_AF=0.0065;NS=2504;SAS_AF=0.0014;SVTYPE=DEL\tGT\t.\nX\t152103859\tDUP_gs.X_CNV_X_152103859_152107426\tA\t<CN0>,<CN2>\t.\tPASS\tAC=15,4;AF=0.00397351,0.0010596;AFR_AF=0.014,0.002;AMR_AF=0,0;AN=3775;CS=DUP_gs;EAS_AF=0,0.0013;END=152107426;EUR_AF=0.0013,0;NS=2504;SAS_AF=0,0.0014;SVTYPE=CNV\tGT\t0\nX\t152104023\tUW_VH_12700\tA\t<CN0>\t100\tPASS\tAC=20;AF=0.0111258;AFR_AF=0.0189;AMR_AF=0.0019;AN=2542;CIEND=0,264;CIPOS=-273,0;CS=DEL_union;EAS_AF=0.0052;END=152107459;EUR_AF=0.0157;MC=BI_GS_DEL1_B2_P3050_71,YL_CN_GWD_5985;NS=2504;SAS_AF=0.0084;SVTYPE=DEL\tGT\t.\nX\t152105370\tBI_GS_DEL1_B1_P3050_71\tA\t<CN0>\t100\tPASS\tAC=23;AF=0.0225166;AFR_AF=0.0249;AMR_AF=0.0267;AN=2542;CIEND=-15,16;CIPOS=-15,16;CS=DEL_union;EAS_AF=0.0118;END=152107509;EUR_AF=0.0248;MC=EM_DL_DEL107342;NS=2504;SAS_AF=0.0251;SVTYPE=DEL\tGT\t.\nX\t152107192\tDEL_pindel_54899\tTGATTGGCCTCTTGTACTGTGATATTGGAGTCCACTGTGTGCACAGCCCTCTACTCACAGTGTCTCATACGGTTCTCCTCACAGTCTCTCAAAGGTTTATGCCTAATTACAACAAAACCCAAAAGCCTGGAGCCTAGGTCTCTGTGCCTCCTGGGAAGGATAGTGCTCCGAAGAAAACAGCCGCAGCTGAGATAGAGTGATGGCAGTGAGGAGGGTACTACTTAGGTGGGTGGAAAAGGCAACTCAGGCGATCTCCTCTAAAGAG\tT\t.\tPASS\tAC=1057;AF=0.28;AFR_AF=0.2672;AMR_AF=0.2844;AN=3775;CS=DEL_pindel;EAS_AF=0.2644;END=152107456;EUR_AF=0.2742;NS=2504;SAS_AF=0.3175;SVTYPE=DEL\tGT\t1\nX\t152342861\tDUP_gs.X_CNV_X_152342861_152367832\tG\t<CN0>,<CN2>\t.\tPASS\tAC=0,6;AF=0,0.0015894;AFR_AF=0,0.002;AMR_AF=0,0;AN=3775;CS=DUP_gs;EAS_AF=0,0.0026;END=152367832;EUR_AF=0,0;NS=2504;SAS_AF=0,0.0028;SVTYPE=DUP\tGT\t0\nX\t152350177\tDUP_gs.X_CNV_X_152350177_152372400\tT\t<CN0>,<CN2>\t.\tPASS\tAC=0,7;AF=0,0.0018543;AFR_AF=0,0.002;AMR_AF=0,0;AN=3775;CS=DUP_gs;EAS_AF=0,0.0039;END=152372400;EUR_AF=0,0;NS=2504;SAS_AF=0,0.0028;SVTYPE=DUP\tGT\t0\nX\t152350641\tBI_GS_DEL1_B5_P3050_180\tG\t<CN0>\t100\tPASS\tAC=82;AF=0.138543;AFR_AF=0.1037;AMR_AF=0.1546;AN=2542;CIEND=-17,18;CIPOS=-17,18;CS=DEL_union;EAS_AF=0.1322;END=152351384;EUR_AF=0.1527;NS=2504;SAS_AF=0.1671;SVTYPE=DEL\tGT\t.\nX\t152360625\tYL_CN_IBS_4170\tT\t<CN0>\t100\tPASS\tAC=10;AF=0.00291391;AFR_AF=0.003;AMR_AF=0.0038;AN=2542;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0;END=152367335;EUR_AF=0.0078;NS=2504;SAS_AF=0;SVTYPE=DEL\tGT\t.\nX\t152413932\tDUP_gs.X_CNV_X_152413932_152529446\tT\t<CN0>,<CN2>\t.\tPASS\tAC=0,4;AF=0,0.0010596;AFR_AF=0,0.001;AMR_AF=0,0;AN=3775;CS=DUP_gs;EAS_AF=0,0.0026;END=152529446;EUR_AF=0,0;NS=2504;SAS_AF=0,0.0014;SVTYPE=DUP\tGT\t0\nX\t152414940\tDUP_gs.X_CNV_X_152414940_152476204\tA\t<CN0>,<CN2>\t.\tPASS\tAC=0,5;AF=0,0.0013245;AFR_AF=0,0.001;AMR_AF=0,0;AN=3775;CS=DUP_gs;EAS_AF=0,0.0039;END=152476204;EUR_AF=0,0;NS=2504;SAS_AF=0,0.0014;SVTYPE=DUP\tGT\t0\nX\t152746729\tDEL_pindel_54909\tGGCAGGCCCTGGGAGCCTCGGGCAAGCCCCTGTTCCTCAGTAGGGCCCCTGTT\tG\t.\tPASS\tAC=1442;AF=0.381987;AFR_AF=0.5284;AMR_AF=0.3187;AN=3775;CS=DEL_pindel;EAS_AF=0.3128;END=152746781;EUR_AF=0.3264;NS=2504;SAS_AF=0.3565;SVTYPE=DEL\tGT\t1\nX\t152803047\tUW_VH_15709\tC\t<CN0>\t100\tPASS\tAC=79;AF=0.107815;AFR_AF=0.0987;AMR_AF=0.1469;AN=2542;CIEND=0,153;CIPOS=-142,0;CS=DEL_union;EAS_AF=0.0877;END=152804209;EUR_AF=0.1266;MC=EM_DL_DEL101195482,BI_GS_DEL1_B3_P3050_16;NS=2504;SAS_AF=0.0933;SVTYPE=DEL\tGT\t.\nX\t152807507\tDEL_pindel_54912\tTAGGAGGCGGGAGGTGGCGGGGGTGGGGGAGGTGGGGGAACACGGGGCAGGGCAGAGTGGTTTCAGACACAG\tT\t.\tPASS\tAC=2161;AF=0.57245;AFR_AF=0.6321;AMR_AF=0.5019;AN=3775;CS=DEL_pindel;EAS_AF=0.5995;END=152807578;EUR_AF=0.5078;NS=2504;SAS_AF=0.5808;SVTYPE=DEL\tGT\t0\nX\t152863846\tBI_GS_DEL1_B5_P3050_464\tC\t<CN0>\t100\tPASS\tAC=5;AF=0.00503311;AFR_AF=0.004;AMR_AF=0.0019;AN=2542;CIEND=-17,18;CIPOS=-17,18;CS=DEL_union;EAS_AF=0.0065;END=152867635;EUR_AF=0.0104;NS=2504;SAS_AF=0.0014;SVTYPE=DEL\tGT\t.\nX\t152883216\tALU_umary_ALU_12834\tG\t<INS:ME:ALU>\t.\tPASS\tAC=146;AF=0.0386755;AFR_AF=0.1396;AMR_AF=0.0095;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0.0013;MEINFO=AluYa4_5,4,281,+;NS=2504;SAS_AF=0;SVLEN=277;SVTYPE=ALU;TSD=AAGAAACTATTGCCTG\tGT\t0\nX\t152895321\tBI_GS_DEL1_B3_P3050_17\tA\t<CN0>\t100\tPASS\tAC=46;AF=0.0884768;AFR_AF=0.0887;AMR_AF=0.0859;AN=2542;CIEND=-31,31;CIPOS=-31,31;CS=DEL_union;EAS_AF=0.072;END=152896285;EUR_AF=0.0836;NS=2504;SAS_AF=0.1128;SVTYPE=DEL\tGT\t.\nX\t152943315\tDEL_pindel_54917\tGTATATATACACTAACCCATGTACATATAGATAGATATGTAGTATATATAGTGTA\tG\t.\tPASS\tAC=1127;AF=0.298543;AFR_AF=0.2931;AMR_AF=0.2977;AN=3775;CS=DEL_pindel;EAS_AF=0.2906;END=152943369;EUR_AF=0.282;NS=2504;SAS_AF=0.3329;SVTYPE=DEL\tGT\t1\nX\t153030469\tBI_GS_DEL1_B2_P3051_15\tC\t<CN0>\t100\tPASS\tAC=10;AF=0.0309934;AFR_AF=0.0269;AMR_AF=0.0382;AN=2542;CIEND=-58,58;CIPOS=-58,58;CS=DEL_union;EAS_AF=0.0353;END=153035081;EUR_AF=0.0483;NS=2504;SAS_AF=0.0084;SVTYPE=DEL\tGT\t.\nX\t153255724\tBI_GS_DEL1_B4_P3051_30\tC\t<CN0>\t100\tPASS\tAC=5;AF=0.0015894;AFR_AF=0.002;AMR_AF=0;AN=2542;CIEND=-29,30;CIPOS=-29,30;CS=DEL_union;EAS_AF=0.0026;END=153262895;EUR_AF=0.0013;MC=YL_CN_ITU_4785;NS=2504;SAS_AF=0.0014;SVTYPE=DEL\tGT\t.\nX\t153413538\tEM_DL_DEL101195634\tT\t<CN0>\t100\tPASS\tAC=343;AF=0.23947;AFR_AF=0.4696;AMR_AF=0.1622;AN=2542;CIEND=-150,150;CIPOS=-150,150;CS=DEL_union;EAS_AF=0.161;END=153414996;EUR_AF=0.1266;NS=2504;SAS_AF=0.1783;SVTYPE=DEL\tGT\t.\nX\t153622445\tUW_VH_10919\tA\t<CN0>\t100\tPASS\tAC=47;AF=0.0890066;AFR_AF=0.0718;AMR_AF=0.0878;AN=2542;CIEND=0,96;CIPOS=-148,0;CS=DEL_union;EAS_AF=0.0746;END=153624732;EUR_AF=0.0496;NS=2504;SAS_AF=0.1713;SVTYPE=DEL\tGT\t.\nX\t153629278\tDEL_pindel_54923\tTTGACGGGGAAGGAACTTCCTCTGGGAACCTTTGGGTCATTGCCCTTTCACTTCAGAAACAGGTTGACAACTCAGCCCTGCTCATGAGGCAGCAAACCCTGCAAAGGGCTGGGACTGGTGGCCTTATGTCAGTTGTCTACTCTGGAGCTTGACTTGGACCTCCCCAGGTCCTAGGCAGTAGGTTGAAAAACACTGAAGTGCTTTTCATGAAGCACAGCTGCAGCAAAGCCTTGCAATCCCAGGCTGGGGTCAGCCTACAGTTGTGTTGCTTATTACAACACATGCGGACCAAGAGGGGCTTGTGGGCTAGAGGC\tT\t.\tPASS\tAC=752;AF=0.199205;AFR_AF=0.1685;AMR_AF=0.2156;AN=3775;CS=DEL_pindel;EAS_AF=0.1832;END=153629591;EUR_AF=0.1997;NS=2504;SAS_AF=0.2465;SVTYPE=DEL\tGT\t1\nX\t153630779\tDEL_pindel_54924\tCCCTACCCCAACCCAGAGCCCACTTTGTCTCCACTCCTGATACTACACTACCTGGCAGGTGGCATGAGTGCAGGGCCCCTGGCTTCCTCTCCTAATCTAGGCACAAGCCCAACCAAAGAACAAGAGCCAAATCAAACAAGGCAGGCAGGGGTGGACTACAGTCACAGGGCAACTATAGTTGAAGCCCCCCAGCCCCA\tC\t.\tPASS\tAC=1228;AF=0.325298;AFR_AF=0.3071;AMR_AF=0.3092;AN=3775;CS=DEL_pindel;EAS_AF=0.3102;END=153630975;EUR_AF=0.3277;NS=2504;SAS_AF=0.376;SVTYPE=DEL\tGT\t1\nX\t153635023\tUW_VH_21715\tT\t<CN0>\t100\tPASS\tAC=131;AF=0.205298;AFR_AF=0.1695;AMR_AF=0.2137;AN=2542;CIEND=0,154;CIPOS=-193,0;CS=DEL_union;EAS_AF=0.1937;END=153636375;EUR_AF=0.1697;NS=2504;SAS_AF=0.2994;SVTYPE=DEL\tGT\t.\nX\t153728656\tYL_CN_ASW_4654\tC\t<CN0>\t100\tPASS\tAC=4;AF=0.00238411;AFR_AF=0.004;AMR_AF=0;AN=2542;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0.0039;END=153733851;EUR_AF=0.0026;NS=2504;SAS_AF=0;SVTYPE=DEL\tGT\t.\nX\t153733651\tDEL_pindel_54926\tGTTTTGCTGTGAACCTAAAATGGCTCTAAGAAGGAAAGTTTACAAAAACAAAAAAGGAATGGAATACACGTAGAAAGTTCCTGGTGCAGAGGCAGGACTGGCATCACCATCGTTTCCTCCCTGGTGAGCCGCTCCTCCAGGGCACCCCTGTGCCTCCAACCCCACATGTGCCTGCTCCAGAAGCAC\tG\t.\tPASS\tAC=230;AF=0.0609271;AFR_AF=0.0249;AMR_AF=0.0763;AN=3775;CS=DEL_pindel;EAS_AF=0.0772;END=153733836;EUR_AF=0.077;NS=2504;SAS_AF=0.0655;SVTYPE=DEL\tGT\t0\nX\t153733755\tDEL_pindel_54930\tCACCATCGTTTCCTCCCTGGTGAGCCGCTCCTCCAGGGCACCCCTGTGCCTCCAACCCCACATGTGCCTGCTCCAGAAGCACTTTTGTCTTCTGAGGCTCTGTCTGCGCTCTGT\tC\t.\tPASS\tAC=975;AF=0.258278;AFR_AF=0.2473;AMR_AF=0.25;AN=3775;CS=DEL_pindel;EAS_AF=0.2448;END=153733868;EUR_AF=0.2533;NS=2504;SAS_AF=0.2994;SVTYPE=DEL\tGT\t1\nX\t153733767\tBI_GS_DEL1_B2_P3051_352\tC\t<CN0>\t100\tPASS\tAC=217;AF=0.249801;AFR_AF=0.2164;AMR_AF=0.2805;AN=2542;CIEND=-9,10;CIPOS=-9,10;CS=DEL_union;EAS_AF=0.2212;END=153734279;EUR_AF=0.2702;NS=2504;SAS_AF=0.2827;SVTYPE=DEL\tGT\t.\nX\t153733776\tDEL_pindel_54932\tGAGCCGCTCCTCCAGGGCACCCCTGTGCCTCCAACCCCACATGTGCCTGCTCCAGA\tG\t.\tPASS\tAC=820;AF=0.217219;AFR_AF=0.2054;AMR_AF=0.2309;AN=3775;CS=DEL_pindel;EAS_AF=0.2029;END=153733831;EUR_AF=0.1997;NS=2504;SAS_AF=0.2577;SVTYPE=DEL\tGT\t0\nX\t153819664\tDUP_gs.X_CNV_X_153819664_153830620\tA\t<CN0>,<CN2>\t.\tPASS\tAC=2,1;AF=0.0005298,0.0002649;AFR_AF=0,0;AMR_AF=0,0;AN=3775;CS=DUP_gs;EAS_AF=0.0013,0.0013;END=153830620;EUR_AF=0,0;NS=2504;SAS_AF=0.0014,0;SVTYPE=CNV\tGT\t0\nX\t153820981\tDUP_gs.X_CNV_X_153820981_153914845\tA\t<CN0>,<CN2>\t.\tPASS\tAC=0,1;AF=0,0.0002649;AFR_AF=0,0;AMR_AF=0,0;AN=3775;CS=DUP_gs;EAS_AF=0,0.0013;END=153914845;EUR_AF=0,0;NS=2504;SAS_AF=0,0;SVTYPE=DUP\tGT\t0\nX\t153917072\tSVA_umary_SVA_849\tA\t<INS:ME:SVA>\t.\tPASS\tAC=1;AF=0.0002649;AFR_AF=0;AMR_AF=0.0019;AN=3775;CS=SVA_umary;EAS_AF=0;EUR_AF=0;MEINFO=SVA,36,1549,-;NS=2504;SAS_AF=0;SVLEN=1513;SVTYPE=SVA;TSD=null\tGT\t0\nX\t154008834\tDEL_pindel_54940\tCAGGTGGTTGGCGGTCCCTGTCCAAATTCTAAGTGTGTGTGCTCTTGGACCCAGTGATCCTACTTGGAGTTTTTCCTACAGATATATTTGCACACATGTGCTATATGCACAGGGCTATTGACTGCAGTATTACACATGCATGCAGCAGAAGACCAAGCAGCTATAGAGAAAAAGAGTTCCTCACACCCTGATAGGGAA\tC\t.\tPASS\tAC=1196;AF=0.316821;AFR_AF=0.321;AMR_AF=0.2977;AN=3775;CS=DEL_pindel;EAS_AF=0.3063;END=154009031;EUR_AF=0.3003;NS=2504;SAS_AF=0.3538;SVTYPE=DEL\tGT\t1\nX\t154014130\tDEL_pindel_54941\tAGGAAATCCCAGAAACAGCATGGCTGGTAGAAGCGCACTAGCTTGGGAAACAGGAGACCAGGGAGGGCTCAGTCCCAGCACTGTCACGTGCTTGGTAACTATGG\tA\t.\tPASS\tAC=654;AF=0.173245;AFR_AF=0.1236;AMR_AF=0.2023;AN=3775;CS=DEL_pindel;EAS_AF=0.1754;END=154014233;EUR_AF=0.1815;NS=2504;SAS_AF=0.2103;SVTYPE=DEL\tGT\t1\nX\t154017323\tDEL_pindel_54942\tGCGGCGGTCTTAGGCATGGGTGTACTCAGTTTGTGAAAATTCATCCAGTTTTATACTTGTGATTTGTGCCCTT\tG\t.\tPASS\tAC=338;AF=0.0895364;AFR_AF=0.0369;AMR_AF=0.1088;AN=3775;CS=DEL_pindel;EAS_AF=0.1008;END=154017395;EUR_AF=0.1136;NS=2504;SAS_AF=0.1114;SVTYPE=DEL\tGT\t1\nX\t154110804\tUW_VH_24038\tT\t<CN0>\t100\tPASS\tAC=8;AF=0.00211921;AFR_AF=0.003;AMR_AF=0.0019;AN=2542;CIEND=0,278;CIPOS=-275,0;CS=DEL_union;EAS_AF=0;END=154607929;EUR_AF=0.0052;MC=UW_VH_24623;NS=2504;SAS_AF=0;SVTYPE=DEL\tGT\t.\nX\t154119649\tDUP_gs.X_CNV_X_154119649_154276173\tG\t<CN0>,<CN2>\t.\tPASS\tAC=0,1;AF=0,0.0002649;AFR_AF=0,0.001;AMR_AF=0,0;AN=3775;CS=DUP_gs;EAS_AF=0,0;END=154276173;EUR_AF=0,0;NS=2504;SAS_AF=0,0;SVTYPE=DUP\tGT\t0\nX\t154265736\tYL_CN_ITU_4787\tG\t<CN0>\t100\tPASS\tAC=6;AF=0.0015894;AFR_AF=0.003;AMR_AF=0;AN=2542;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0;END=154273101;EUR_AF=0.0026;NS=2504;SAS_AF=0.0014;SVTYPE=DEL\tGT\t.\nX\t154265886\tDUP_gs.X_CNV_X_154265886_154272944\tG\t<CN0>,<CN2>\t.\tPASS\tAC=1,1;AF=0.0002649,0.0002649;AFR_AF=0,0.001;AMR_AF=0,0;AN=3775;CS=DUP_gs;EAS_AF=0,0;END=154272944;EUR_AF=0,0;NS=2504;SAS_AF=0.0014,0;SVTYPE=CNV\tGT\t0\nX\t154275425\tALU_umary_ALU_12835\tT\t<INS:ME:ALU>\t.\tPASS\tAC=3;AF=0.0007947;AFR_AF=0.001;AMR_AF=0;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0.0026;MEINFO=AluUndef,1,281,-;NS=2504;SAS_AF=0;SVLEN=280;SVTYPE=ALU;TSD=null\tGT\t0\nX\t154285159\tDEL_pindel_54945\tCTTGAGTAGGTTGTAATAAATAGTCTGGCCTCAGACTGTATTCTGATTGTCTGAATTAAGATCTGTAGGTAGGTCCCTCCTGAAGTTTTTTCCCAGCTGGCTGCCTCTACGACTGTGAGGGTCATGGTTGAGGTCAGTATTGCAGGTTGGCCTCATCCTGCTAGTATGAGAACGGCTGTGAGTTCTGCCCACGGTGTGAGGCCACTGTGACCACTTGGGATTGTGCAGAGCTGGCATGGAGGTTGAACACGCACAGCTGCACACCTTGTTTTCAG\tC\t.\tPASS\tAC=871;AF=0.230728;AFR_AF=0.2154;AMR_AF=0.2538;AN=3775;CS=DEL_pindel;EAS_AF=0.2186;END=154285433;EUR_AF=0.2245;NS=2504;SAS_AF=0.2549;SVTYPE=DEL\tGT\t1\nX\t154285270\tUW_VH_3175\tA\t<CN0>\t100\tPASS\tAC=226;AF=0.236291;AFR_AF=0.2124;AMR_AF=0.2691;AN=2542;CIEND=0,236;CIPOS=-268,0;CS=DEL_union;EAS_AF=0.1688;END=154285819;EUR_AF=0.2859;NS=2504;SAS_AF=0.2646;SVTYPE=DEL\tGT\t.\nX\t154285287\tDEL_pindel_54949\tTGAGGTCAGTATTGCAGGTTGGCCTCATCCTGCTAGTATGAGAACGGCTGTGA\tT\t.\tPASS\tAC=484;AF=0.128212;AFR_AF=0.0887;AMR_AF=0.1622;AN=3775;CS=DEL_pindel;EAS_AF=0.1309;END=154285339;EUR_AF=0.141;NS=2504;SAS_AF=0.1421;SVTYPE=DEL\tGT\t0\nX\t154285781\tDEL_pindel_54954\tTGGAATGTGTTCGGGGTTTCATCGCCCCCTTGTGGCGGCGACGTGGTAACACCGCACTCAA\tT\t.\tPASS\tAC=907;AF=0.240265;AFR_AF=0.2343;AMR_AF=0.2156;AN=3775;CS=DEL_pindel;EAS_AF=0.2343;END=154285841;EUR_AF=0.2337;NS=2504;SAS_AF=0.2799;SVTYPE=DEL\tGT\t1\nX\t154298802\tDUP_gs.X_CNV_X_154298802_154384198\tA\t<CN0>,<CN2>\t.\tPASS\tAC=0,1;AF=0,0.0002649;AFR_AF=0,0.001;AMR_AF=0,0;AN=3775;CS=DUP_gs;EAS_AF=0,0;END=154384198;EUR_AF=0,0;NS=2504;SAS_AF=0,0;SVTYPE=DUP\tGT\t0\nX\t154313357\tDEL_pindel_54955\tGAGCAGGTCTGCCACTTCACAGGAACATTTTCACCACGTAGCTCCTAAAAGGAAATGAGAAGGCCTATTTCTGAAATGTTTCCATGTCCCCTTGGGGGGAAAACAGTTTCAGTTCATTCCTCCACTGACATTAAAAGAGAATGTCTATTTCAGGCAAGAATAATAAAATGGGCTTTTAATACTACATATGGTTATTTCATCATATTTCTTAGGAATGGTGCTGTGTAATATCACTGTGCACAAAATCACAGATTCTTCAAGAAAACTGTTTCTTAAATACCTGTGTAATTGCCCACAAAGGGGCCCAGTGCATGTGACATTCAGTCTAACAGCTTAACCAGCTCTCTGCCGTACTTGCCATACAGAAAAGCTGAAACTGCTGGTTTCCAGGTCAGTTTATGTGGTCCAATCCGTAACCTGCTTTCTTCCTGAAAGACCCAACCAGAGGAAACTGACCAAAAGAGCATCTCTCGTGTACCAGGCCTGAGTTCAACAGAAAACAGATAAGCGACCTCCAACTTTTTATCCCTGGGTCTGAAGTCACATCCTGAAGAGTTTGGTTACACCAGTAATGAAACATACATGGTTTCCTGTTGCTTTCCTTTCTTAATTTCCGGTGAGGATAATGTCACCAGAAAGTTCCATCTCCCTCTCTCAGTAACAGGGAGAAGTGGAACAGGCAATTGGATCTCA\tG\t.\tPASS\tAC=701;AF=0.185695;AFR_AF=0.1456;AMR_AF=0.208;AN=3775;CS=DEL_pindel;EAS_AF=0.1976;END=154314049;EUR_AF=0.1867;NS=2504;SAS_AF=0.2117;SVTYPE=DEL\tGT\t1\nX\t154314369\tDEL_pindel_54956\tACACCTTGGAAATCATGAACGTCCCGTCTGTGGTCACAGCTGTCTGTCCAGTGCTGGCTGACGTCCAAGCTAACAGCCGCCCCATTGGGAAACTTCATGCTGATCACAGTGGCATCTGCATCCTTTAAGGAGGCCATATCTGGTCAGAAGGCATGTCCGAGAGAAAG\tA\t.\tPASS\tAC=931;AF=0.246623;AFR_AF=0.2393;AMR_AF=0.2328;AN=3775;CS=DEL_pindel;EAS_AF=0.2277;END=154314535;EUR_AF=0.248;NS=2504;SAS_AF=0.2855;SVTYPE=DEL\tGT\t1\nX\t154385298\tYL_CN_FIN_4390\tC\t<CN0>\t100\tPASS\tAC=28;AF=0.0108609;AFR_AF=0.008;AMR_AF=0.021;AN=2542;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0.0013;END=154404162;EUR_AF=0.0248;MC=YL_CN_GWD_5990,BI_GS_DEL1_B1_P3052_228;NS=2504;SAS_AF=0.0028;SVTYPE=DEL\tGT\t.\nX\t154386087\tDUP_gs.X_CNV_X_154386087_154420956\tT\t<CN0>,<CN2>\t.\tPASS\tAC=17,1;AF=0.00450331,0.0002649;AFR_AF=0.003,0.001;AMR_AF=0.0134,0;AN=3775;CS=DUP_gs;EAS_AF=0,0;END=154420956;EUR_AF=0.0078,0;NS=2504;SAS_AF=0.0014,0;SVTYPE=CNV\tGT\t0\nX\t154402183\tDUP_gs.X_CNV_X_154402183_154449882\tA\t<CN0>,<CN2>\t.\tPASS\tAC=0,1;AF=0,0.0002649;AFR_AF=0,0.001;AMR_AF=0,0;AN=3775;CS=DUP_gs;EAS_AF=0,0;END=154449882;EUR_AF=0,0;NS=2504;SAS_AF=0,0;SVTYPE=DUP\tGT\t0\nX\t154403901\tDEL_pindel_54958\tGATGATTTTATAAGAGGAAACTCCTTTCGCTTGGTTCACATTCTCTCTTATCTGCCTCTATGTAAGACGTGCCATTTGCCTTCCACC\tG\t.\tPASS\tAC=481;AF=0.127417;AFR_AF=0.0768;AMR_AF=0.1374;AN=3775;CS=DEL_pindel;EAS_AF=0.1688;END=154403987;EUR_AF=0.1345;NS=2504;SAS_AF=0.1393;SVTYPE=DEL\tGT\t0\nX\t154403956\tDEL_pindel_54960\tCTCTATGTAAGACGTGCCATTTGCCTTCCACCATGATTGTGAGGCCTCCCCAGCCACGTGGAACTGTGAGTCCATGAAACCTCTTTT\tC\t.\tPASS\tAC=366;AF=0.0969536;AFR_AF=0.0469;AMR_AF=0.1031;AN=3775;CS=DEL_pindel;EAS_AF=0.1479;END=154404042;EUR_AF=0.1097;NS=2504;SAS_AF=0.0947;SVTYPE=DEL\tGT\t0\nX\t154485925\tBI_GS_DEL1_B4_P3052_74\tT\t<CN0>\t100\tPASS\tAC=998;AF=0.418013;AFR_AF=0.7627;AMR_AF=0.3931;AN=2542;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.2893;END=154486943;EUR_AF=0.2232;MC=UW_VH_5593,YL_CN_BEB_3771,YL_CN_JPT_4798,EM_DL_DEL101195842;NS=2504;SAS_AF=0.2994;SVTYPE=DEL\tGT\t.\nX\t154511616\tALU_umary_ALU_12836\tT\t<INS:ME:ALU>\t.\tPASS\tAC=3;AF=0.0007947;AFR_AF=0.003;AMR_AF=0;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0;MEINFO=AluYe5,2,268,-;NS=2504;SAS_AF=0;SVLEN=266;SVTYPE=ALU;TSD=null\tGT\t0\nX\t154553899\tBI_GS_DEL1_B3_P3052_23\tC\t<CN0>\t100\tPASS\tAC=8;AF=0.0103311;AFR_AF=0.012;AMR_AF=0.0153;AN=2542;CIEND=-26,26;CIPOS=-26,26;CS=DEL_union;EAS_AF=0.0092;END=154556947;EUR_AF=0.0104;NS=2504;SAS_AF=0.0056;SVTYPE=DEL\tGT\t.\nX\t154632079\tBI_GS_DEL1_B4_P3052_89\tT\t<CN0>\t100\tPASS\tAC=6;AF=0.0018543;AFR_AF=0.002;AMR_AF=0;AN=2542;CIEND=-4,5;CIPOS=-4,5;CS=DEL_union;EAS_AF=0.0026;END=154645930;EUR_AF=0.0039;MC=YL_CN_JPT_4800;NS=2504;SAS_AF=0;SVTYPE=DEL\tGT\t.\nX\t154658693\tDUP_gs.X_CNV_X_154658693_154683572\tT\t<CN0>,<CN2>\t.\tPASS\tAC=0,7;AF=0,0.0018543;AFR_AF=0,0;AMR_AF=0,0.0019;AN=3775;CS=DUP_gs;EAS_AF=0,0.0026;END=154683572;EUR_AF=0,0.0052;NS=2504;SAS_AF=0,0;SVTYPE=DUP\tGT\t0\nX\t154726219\tDUP_gs.X_CNV_X_154726219_154770591\tG\t<CN0>,<CN2>\t.\tPASS\tAC=0,1;AF=0,0.0002649;AFR_AF=0,0;AMR_AF=0,0;AN=3775;CS=DUP_gs;EAS_AF=0,0;END=154770591;EUR_AF=0,0.0013;NS=2504;SAS_AF=0,0;SVTYPE=DUP\tGT\t0\nX\t154762277\tDUP_gs.X_CNV_X_154762277_154778295\tG\t<CN0>,<CN2>\t.\tPASS\tAC=3,1;AF=0.0007947,0.0002649;AFR_AF=0,0;AMR_AF=0.0057,0;AN=3775;CS=DUP_gs;EAS_AF=0,0;END=154778295;EUR_AF=0,0.0013;NS=2504;SAS_AF=0,0;SVTYPE=CNV\tGT\t0\nX\t154762298\tBI_GS_DEL1_B5_P3052_515\tT\t<CN0>\t100\tPASS\tAC=12;AF=0.00344371;AFR_AF=0.004;AMR_AF=0.0076;AN=2542;CIEND=-12,12;CIPOS=-12,12;CS=DEL_union;EAS_AF=0.0013;END=154778228;EUR_AF=0.0052;NS=2504;SAS_AF=0;SVTYPE=DEL\tGT\t.\nX\t154766103\tDUP_gs.X_CNV_X_154766103_154778119\tT\t<CN0>,<CN2>\t.\tPASS\tAC=6,1;AF=0.0015894,0.0002649;AFR_AF=0,0;AMR_AF=0.0076,0;AN=3775;CS=DUP_gs;EAS_AF=0.0013,0;END=154778119;EUR_AF=0.0013,0.0013;NS=2504;SAS_AF=0,0;SVTYPE=CNV\tGT\t0\nX\t154771110\tBI_GS_DEL1_B2_P3052_320\tT\t<CN0>\t100\tPASS\tAC=20;AF=0.00582781;AFR_AF=0.004;AMR_AF=0.0095;AN=2542;CIEND=-1,2;CIPOS=-1,2;CS=DEL_union;EAS_AF=0.0039;END=154778240;EUR_AF=0.0117;MC=YL_CN_CDX_3922;NS=2504;SAS_AF=0.0014;SVTYPE=DEL\tGT\t.\nX\t154771291\tBI_GS_DEL1_B4_P3052_103\tC\t<CN0>\t100\tPASS\tAC=19;AF=0.00556291;AFR_AF=0.004;AMR_AF=0.0095;AN=2542;CIEND=-18,18;CIPOS=-18,18;CS=DEL_union;EAS_AF=0.0026;END=154781130;EUR_AF=0.0104;MC=YL_CN_CEU_5527;NS=2504;SAS_AF=0.0028;SVTYPE=DEL\tGT\t.\nX\t154776815\tBI_GS_DEL1_B3_P3052_31\tT\t<CN0>\t100\tPASS\tAC=39;AF=0.0140397;AFR_AF=0.0249;AMR_AF=0.0076;AN=2542;CIEND=-2,2;CIPOS=-2,2;CS=DEL_union;EAS_AF=0.0013;END=154786039;EUR_AF=0.0104;MC=YL_CN_GIH_3519,YL_CN_PJL_5146,YL_CN_ACB_5187,BI_GS_DEL1_B5_P3052_531;NS=2504;SAS_AF=0.0209;SVTYPE=DEL\tGT\t.\nX\t154778111\tUW_VH_8912\tT\t<CN0>\t100\tPASS\tAC=57;AF=0.0214569;AFR_AF=0.0499;AMR_AF=0.0095;AN=2542;CIEND=0,345;CIPOS=-304,0;CS=DEL_union;EAS_AF=0.0013;END=154782566;EUR_AF=0.0117;MC=YL_CN_MSL_4135,BI_GS_DEL1_B4_P3052_107,YL_CN_ASW_4661;NS=2504;SAS_AF=0.0223;SVTYPE=DEL\tGT\t.\nX\t154778177\tBI_GS_DEL1_B2_P3052_329\tA\t<CN0>\t100\tPASS\tAC=321;AF=0.309139;AFR_AF=0.3131;AMR_AF=0.2767;AN=2542;CIEND=-7,8;CIPOS=-7,8;CS=DEL_union;EAS_AF=0.3207;END=154778659;EUR_AF=0.3055;NS=2504;SAS_AF=0.3189;SVTYPE=DEL\tGT\t.\nX\t154781652\tBI_GS_DEL1_B1_P3052_396\tG\t<CN0>\t100\tPASS\tAC=38;AF=0.0145695;AFR_AF=0.0249;AMR_AF=0.0134;AN=2542;CIEND=-3,3;CIPOS=-3,3;CS=DEL_union;EAS_AF=0.0013;END=154787659;EUR_AF=0.0117;MC=BI_GS_DEL1_B5_P3052_535,YL_CN_LWK_4318,UW_VH_12523,EM_DL_DEL107376;NS=2504;SAS_AF=0.0181;SVTYPE=DEL\tGT\t.\nX\t154790161\tUW_VH_2775\tC\t<CN0>\t100\tPASS\tAC=1496;AF=0.618013;AFR_AF=0.2542;AMR_AF=0.6565;AN=2542;CIEND=0,361;CIPOS=-327,0;CS=DEL_union;EAS_AF=0.7539;END=154790501;EUR_AF=0.8068;NS=2504;SAS_AF=0.7521;SVTYPE=DEL\tGT\t.\nX\t154790197\tYL_CN_PUR_5790\tC\t<CN0>\t100\tPASS\tAC=1417;AF=0.544901;AFR_AF=0.1176;AMR_AF=0.5992;AN=2542;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0.7238;END=154802370;EUR_AF=0.7637;MC=BI_GS_DEL1_B2_P3052_333,EM_DL_DEL107380;NS=2504;SAS_AF=0.6783;SVTYPE=DEL\tGT\t.\nX\t154790201\tL1_umary_LINE1_3149\tG\t<INS:ME:LINE1>\t.\tPASS\tAC=1743;AF=0.461722;AFR_AF=0.0867;AMR_AF=0.5076;AN=3775;CS=L1_umary;EAS_AF=0.6217;EUR_AF=0.6436;MEINFO=LINE1,4726,5788,-;NS=2504;SAS_AF=0.5877;SVLEN=1062;SVTYPE=LINE1;TSD=null\tGT\t0\nX\t154798201\tYL_CN_IBS_4183\tT\t<CN0>\t100\tPASS\tAC=1547;AF=0.60106;AFR_AF=0.3061;AMR_AF=0.626;AN=2542;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0.7277;END=154803718;EUR_AF=0.7676;MC=YL_CN_CLM_3950,YL_CN_PUR_5791;NS=2504;SAS_AF=0.6825;SVTYPE=DEL\tGT\t.\nX\t154867954\tDEL_pindel_54962\tAATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATAT\tA\t.\tPASS\tAC=917;AF=0.242914;AFR_AF=0.2014;AMR_AF=0.2844;AN=3775;CS=DEL_pindel;EAS_AF=0.2592;END=154868024;EUR_AF=0.2467;NS=2504;SAS_AF=0.2493;SVTYPE=DEL\tGT\t0\nX\t154876376\tUW_VH_9227\tC\t<CN0>\t100\tPASS\tAC=12;AF=0.00317881;AFR_AF=0.003;AMR_AF=0.0057;AN=2542;CIEND=0,242;CIPOS=-235,0;CS=DEL_union;EAS_AF=0.0013;END=154880988;EUR_AF=0.0065;MC=YL_CN_CLM_3951,EM_DL_DEL107383,BI_GS_DEL1_B1_P3052_440;NS=2504;SAS_AF=0;SVTYPE=DEL\tGT\t.\nX\t154882092\tBI_GS_DEL1_B4_P3052_125\tC\t<CN0>\t100\tPASS\tAC=12;AF=0.00344371;AFR_AF=0.003;AMR_AF=0.0019;AN=2542;CIEND=-10,10;CIPOS=-10,10;CS=DEL_union;EAS_AF=0.0065;END=154893477;EUR_AF=0.0052;MC=YL_CN_JPT_4807,EM_DL_DEL107384;NS=2504;SAS_AF=0;SVTYPE=DEL\tGT\t.\nX\t154909099\tBI_GS_DEL1_B3_P3052_44\tA\t<CN0>\t100\tPASS\tAC=6;AF=0.00211921;AFR_AF=0.004;AMR_AF=0;AN=2542;CIEND=-32,32;CIPOS=-32,32;CS=DEL_union;EAS_AF=0;END=154918556;EUR_AF=0.0052;MC=YL_CN_MSL_4139;NS=2504;SAS_AF=0;SVTYPE=DEL\tGT\t.\nX\t154909888\tALU_umary_ALU_12837\tA\t<INS:ME:ALU>\t.\tPASS\tAC=2;AF=0.0005298;AFR_AF=0.002;AMR_AF=0;AN=3775;CS=ALU_umary;EAS_AF=0;EUR_AF=0;MEINFO=AluUndef,1,259,-;NS=2504;SAS_AF=0;SVLEN=258;SVTYPE=ALU;TSD=null\tGT\t0\nX\t154916967\tBI_GS_DEL1_B3_P3052_45\tG\t<CN0>\t100\tPASS\tAC=6;AF=0.00423841;AFR_AF=0.006;AMR_AF=0.0019;AN=2542;CIEND=-22,22;CIPOS=-22,22;CS=DEL_union;EAS_AF=0.0013;END=154933972;EUR_AF=0.0065;MC=YL_CN_PJL_5150;NS=2504;SAS_AF=0.0042;SVTYPE=DEL\tGT\t.\nX\t154918469\tUW_VH_1324\tT\t<CN0>\t100\tPASS\tAC=872;AF=0.358146;AFR_AF=0.5972;AMR_AF=0.3531;AN=2542;CIEND=0,376;CIPOS=-514,0;CS=DEL_union;EAS_AF=0.2788;END=154921719;EUR_AF=0.1984;MC=BI_GS_DEL1_B4_P3052_134,EM_DL_DEL107886,YL_CN_PEL_4427,YL_CN_TSI_4507;NS=2504;SAS_AF=0.2827;SVTYPE=DEL\tGT\t.\nX\t154957224\tUW_VH_10351\tT\t<CN0>\t100\tPASS\tAC=7;AF=0.00219649;AFR_AF=0.0045;AMR_AF=0.0014;AN=2542;CIEND=0,175;CIPOS=-177,0;CS=DEL_union;EAS_AF=0;END=154965634;EUR_AF=0.003;MC=BI_GS_DEL1_B1_P3052_498,YL_CN_GWD_6002;NS=2504;SAS_AF=0.001;SVTYPE=DEL\tGT\t.\nX\t155040763\tUW_VH_21016\tT\t<CN0>\t100\tPASS\tAC=6;AF=0.00179712;AFR_AF=0.0023;AMR_AF=0;AN=2542;CIEND=0,82;CIPOS=-150,0;CS=DEL_union;EAS_AF=0.001;END=155047741;EUR_AF=0.003;MC=BI_GS_DEL1_B4_P3053_10;NS=2504;SAS_AF=0.002;SVTYPE=DEL\tGT\t.\nX\t155090084\tUW_VH_7995\tA\t<CN0>\t100\tPASS\tAC=102;AF=0.0385383;AFR_AF=0.1369;AMR_AF=0.0159;AN=2542;CIEND=0,380;CIPOS=-324,0;CS=DEL_union;EAS_AF=0;END=155092227;EUR_AF=0.001;MC=YL_CN_ESN_4544,BI_GS_DEL1_B2_P3053_63;NS=2504;SAS_AF=0;SVTYPE=DEL\tGT\t.\nX\t155146395\tBI_GS_DEL1_B3_P3053_10\tA\t<CN0>\t100\tPASS\tAC=4;AF=0.00119808;AFR_AF=0.0023;AMR_AF=0;AN=2542;CIEND=-28,29;CIPOS=-28,29;CS=DEL_union;EAS_AF=0;END=155148983;EUR_AF=0.002;NS=2504;SAS_AF=0.001;SVTYPE=DEL\tGT\t.\n\n"
  },
  {
    "path": "tests/AnnotSV/test_03_CDSandTxCoverage/command_Tcl.sh",
    "content": "#!/bin/bash -x\n\nset -eo pipefail\n\n\ncut=\"$ANNOTSV/tests/AnnotSV/scripts/cutWithColumnNames.tcl\"\n\n\n# Check of the following output columns:\n########################################\n# - Overlapped_CDS_length\n# - Overlapped_tx_length\n\n\n# Check on the FCGR3A gene (NM_000569)\n######################################\n# \n# grep NM_000569 $ANNOTSV/share/AnnotSV/Annotations_Human/Genes/GRCh37/genes.RefSeq.sorted.bed\n# 1       161511548       161519608       -       FCGR3A  NM_000569       161512801       161519526       161511548,161514490,161518210,161518800,161519486,      161512989,161514748,161518468,161518821,161519608,\n\n# 1       161511549       161519608       -       FCGR3A  NM_000569       161512801       161519526       161511549,161514490,161518210,161518800,161519486,      161512989,161514748,161518468,161518821,161519608,\n# \n# Truth = input/test_tcl.annotated.tsv.truth.sauv\n\n\nmkdir -p ./output\nrm -f \"./output/test_tcl.annotated.tsv\"\n\n$ANNOTSV/bin/AnnotSV -SVinputFile \"./input/control_9deletions_FCGR3A_NM_000569.bed\" -SVinputInfo 1 -outputFile \"./output/test_tcl.annotated.tsv\" -svtBEDcol 4 -genomeBuild GRCh37\n\ncompare=`$cut \"./output/test_tcl.annotated.tsv\"          \"Tx;Overlapped_CDS_length;Overlapped_tx_length\"`\ntruth=`$cut \"./input/test_tcl.annotated.tsv.truth.sauv\"  \"Tx;Overlapped_CDS_length;Overlapped_tx_length\"`\n\nif [ \"$compare\" != \"$truth\" ]\nthen\n        echo \"error 1: not the expected values\"\n        exit 1\nelse\n\techo \"ok - Finished\"\nfi\n\n\n\n"
  },
  {
    "path": "tests/AnnotSV/test_03_CDSandTxCoverage/input/control_9deletions_FCGR3A_NM_000569.bed",
    "content": "1\t161512000\t161512500\tDEL\n1\t161511000\t161511600\tDEL\n1\t161511000\t161512900\tDEL\n1\t161511000\t161514600\tDEL\n1\t161512500\t161518300\tDEL\n1\t161511000\t161519950\tDEL\n1\t161518600\t161519950\tDEL\n1\t161518810\t161519850\tDEL\n1\t161518810\t161519500\tDEL\n"
  },
  {
    "path": "tests/AnnotSV/test_03_CDSandTxCoverage/input/test_tcl.annotated.tsv.truth.sauv",
    "content": "AnnotSV_ID\tSV_chrom\tSV_start\tSV_end\tSV_length\tSV_type\tSamples_ID\tAnnotation_mode\tCytoBand\tGene_name\tClosest_left\tClosest_right\tGene_count\tTx\tTx_version\tTx_start\tTx_end\tOverlapped_tx_length\tOverlapped_CDS_length\tOverlapped_CDS_percent\tFrameshift\tExon_count\tLocation\tLocation2\tDist_nearest_SS\tNearest_SS_type\tIntersect_start\tIntersect_end\tRE_gene\tP_gain_phen\tP_gain_hpo\tP_gain_source\tP_gain_coord\tP_loss_phen\tP_loss_hpo\tP_loss_source\tP_loss_coord\tP_ins_phen\tP_ins_hpo\tP_ins_source\tP_ins_coord\tpo_P_gain_phen\tpo_P_gain_hpo\tpo_P_gain_source\tpo_P_gain_coord\tpo_P_gain_percent\tpo_P_loss_phen\tpo_P_loss_hpo\tpo_P_loss_source\tpo_P_loss_coord\tpo_P_loss_percent\tP_snvindel_nb\tP_snvindel_phen\tB_gain_source\tB_gain_coord\tB_gain_AFmax\tB_loss_source\tB_loss_coord\tB_loss_AFmax\tB_ins_source\tB_ins_coord\tB_ins_AFmax\tB_inv_source\tB_inv_coord\tB_inv_AFmax\tpo_B_gain_allG_source\tpo_B_gain_allG_coord\tpo_B_gain_someG_source\tpo_B_gain_someG_coord\tpo_B_loss_allG_source\tpo_B_loss_allG_coord\tpo_B_loss_someG_source\tpo_B_loss_someG_coord\tCosmic_ID\tCosmic_mut_typ\tGC_content_left\tGC_content_right\tRepeat_coord_left\tRepeat_type_left\tRepeat_coord_right\tRepeat_type_right\tGap_left\tGap_right\tSegDup_left\tSegDup_right\tENCODE_blacklist_left\tENCODE_blacklist_characteristics_left\tENCODE_blacklist_right\tENCODE_blacklist_characteristics_right\tACMG\tHI\tTS\tDDD_HI_percent\tExAC_delZ\tExAC_dupZ\tExAC_cnvZ\tExAC_synZ\tExAC_misZ\tGenCC_disease\tGenCC_moi\tGenCC_classification\tGenCC_pmid\tNCBI_gene_ID\tOMIM_ID\tOMIM_phenotype\tOMIM_inheritance\tOMIM_morbid\tOMIM_morbid_candidate\tLOEUF_bin\tGnomAD_pLI\tExAC_pLI\tAnnotSV_ranking_score\tAnnotSV_ranking_criteria\tACMG_class\n1_161511001_161514600_DEL_1\t1\t161511001\t161514600\t-3599\tDEL\tNA\tfull\tq23.3\tFCGR3A\tHSPA6\tFCGR2C\t1\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tATF6 (morbid/RE=EA_enhancer);MPZ (morbid/RE=EA_enhancer);SDHC (HI=3/morbid/RE=EA_enhancer)\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tdbVar:nssv15156967;dbVar:nssv15156970;dbVar:nssv15149867;nssv15151118;dbVar:nssv15127572;dbVar:nssv15148250;dbVar:nssv15133506\t1:47852-249228449;1:82155-249218992;1:849468-249224684;1:145764500-249233096;1:149825832-180236332;1:157717037-175990383\t0.00;0.00;0.00;0.00;0.01;0.02\tImmunodeficiency 20, 615707 (3) AR\t\tdbVar:nssv15129680;dbVar:nssv15777243;dbVar:nssv15143225;dbVar:nssv15132112;dbVar:nssv15156891;dbVar:nssv15606086;dbVar:nssv17970186;morbid:FCGR3A\t1:146053395-249233096;1:157321300-167391423;1:159343439-161918472;1:159449678-166864323;1:159815643-177026983;1:160369891-175796325;1:160417297-166197042;1:161511549-161520527\t0.00;0.04;0.14;0.05;0.02;0.02;0.06;33.99\t\t\t1000g;DDD:3093;dbVar;esv3587730;gnomAD-SV_v2.1_DUP_1_2488;nsv514915\tchr1:161480422-161646940;1:161483000-161621200;chr1:161484700-161541000;1:161488422-161634845;chr1:161488444-161519959;1:161488445-161519959;1:161488445-161519959;1:161509489-161646576\t0.1000\tDDD:3093;dbVar\tchr1:161485000-161522125;1:161488422-161634845;chr1:161488444-161519959\t0.0769\t\t\t\tIMH\t1:4599855-170869838;1:17124869-234920285;1:69129973-188838391;1:76428346-179322403;1:108097960-232960701\t0.3095\t\t\t1:161483000-161621200 gnomAD-SV_v2.1_DUP_1_2488;1:161488422-161634845 DDD:3093;1:161488445-161519959 1000g;1:161509489-161646576 nsv514915\tchr1:161480422-161646940 dbVar;chr1:161484700-161541000 dbVar;chr1:161488444-161519959 dbVar;1:161488445-161519959 esv3587730\t\t\t1:161488422-161634845 DDD:3093;\tchr1:161485000-161522125 dbVar;chr1:161488444-161519959 dbVar\t\t\t0.435\t0.440\t1:161510916-161511163\tL2c\t\t\t\t\t1:161479598-161518642\t1:161479598-161518642\t\t\t\t\t\t\t\t92.43\t\t\t\t0.0515701444991238\t-0.213860724130331\t\t\t\t\t\t146740\t\t\tyes\t\t8\t3.6955e-06\t1.2227e-05\t0.9\t1A (cf Gene_count, RE_gene, +0.00);2D-4 (FCGR3A, +0.90);3A (1 gene, +0.00);5F (+0.00)\t4\n1_161511001_161514600_DEL_1\t1\t161511001\t161514600\t-3599\tDEL\tNA\tsplit\tq23.3\tFCGR3A\t\t\t\tNM_000569\t8\t161511548\t161519608\t3052\t298\t38\tyes\t5\texon4-txEnd\tCDS-3'UTR\t110\t5'\t161511548\t161514600\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t1000g;DDD:3093;dbVar;esv3587730;gnomAD-SV_v2.1_DUP_1_2488;nsv514915\tchr1:161480422-161646940;1:161483000-161621200;chr1:161484700-161541000;1:161488422-161634845;chr1:161488444-161519959;1:161488445-161519959;1:161488445-161519959;1:161509489-161646576\t0.1000\tDDD:3093;dbVar\tchr1:161485000-161522125;1:161488422-161634845;chr1:161488444-161519959\t0.0769\t\t\t\tIMH\t1:4599855-170869838;1:17124869-234920285;1:69129973-188838391;1:76428346-179322403;1:108097960-232960701\t0.3095\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t92.43\t\t\t\t0.0515701444991238\t-0.213860724130331\tautosomal recessive primary immunodeficiency with defective spontaneous natural killer cell cytotoxicity\tAR\tSupportive\t23006327[PMID]\t2214\t146740\tImmunodeficiency 20, 615707 (3) AR\tAR\tyes\t\t8\t3.6955e-06\t1.2227e-05\t\t\tfull=4\n1_161512501_161518300_DEL_1\t1\t161512501\t161518300\t-5799\tDEL\tNA\tfull\tq23.3\tFCGR3A\tHSPA6\tFCGR2C\t1\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tATF6 (morbid/RE=EA_enhancer);MPZ (morbid/RE=EA_enhancer);SDHC (HI=3/morbid/RE=EA_enhancer)\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tdbVar:nssv15156967;dbVar:nssv15156970;dbVar:nssv15149867;nssv15151118;dbVar:nssv15127572;dbVar:nssv15148250;dbVar:nssv15133506\t1:47852-249228449;1:82155-249218992;1:849468-249224684;1:145764500-249233096;1:149825832-180236332;1:157717037-175990383\t0.00;0.00;0.00;0.01;0.02;0.03\tImmunodeficiency 20, 615707 (3) AR\t\tdbVar:nssv15129680;dbVar:nssv15777243;dbVar:nssv15143225;dbVar:nssv15132112;dbVar:nssv15156891;dbVar:nssv15606086;dbVar:nssv17970186;morbid:FCGR3A\t1:146053395-249233096;1:157321300-167391423;1:159343439-161918472;1:159449678-166864323;1:159815643-177026983;1:160369891-175796325;1:160417297-166197042;1:161511549-161520527\t0.01;0.06;0.23;0.08;0.03;0.04;0.10;64.60\t\t\t1000g;DDD:3093;dbVar;esv3587730;gnomAD-SV_v2.1_DUP_1_2488;nsv514915\tchr1:161480422-161646940;1:161483000-161621200;chr1:161484700-161541000;1:161488422-161634845;chr1:161488444-161519959;1:161488445-161519959;1:161488445-161519959;1:161509489-161646576\t0.1000\tDDD:3093;dbVar\tchr1:161485000-161522125;1:161488422-161634845;chr1:161488444-161519959\t0.0769\t\t\t\tIMH\t1:4599855-170869838;1:17124869-234920285;1:69129973-188838391;1:76428346-179322403;1:108097960-232960701\t0.3095\t\t\t1:161483000-161621200 gnomAD-SV_v2.1_DUP_1_2488;1:161488422-161634845 DDD:3093;1:161488445-161519959 1000g;1:161509489-161646576 nsv514915\tchr1:161480422-161646940 dbVar;chr1:161484700-161541000 dbVar;chr1:161488444-161519959 dbVar;1:161488445-161519959 esv3587730\t\t\t1:161488422-161634845 DDD:3093;\tchr1:161485000-161522125 dbVar;chr1:161488444-161519959 dbVar\t\t\t0.360\t0.545\t\t\t\t\t\t\t1:161479598-161518642\t1:161479598-161518642\t\t\t\t\t\t\t\t92.43\t\t\t\t0.0515701444991238\t-0.213860724130331\t\t\t\t\t\t146740\t\t\tyes\t\t8\t3.6955e-06\t1.2227e-05\t0.9\t1A (cf Gene_count, RE_gene, +0.00);2D-4 (FCGR3A, +0.90);3A (1 gene, +0.00);5F (+0.00)\t4\n1_161512501_161518300_DEL_1\t1\t161512501\t161518300\t-5799\tDEL\tNA\tsplit\tq23.3\tFCGR3A\t\t\t\tNM_000569\t8\t161511548\t161519608\t5800\t536\t70\tyes\t5\texon3-exon5\tCDS-3'UTR\t90\t5'\t161512500\t161518300\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t1000g;DDD:3093;dbVar;esv3587730;gnomAD-SV_v2.1_DUP_1_2488;nsv514915\tchr1:161480422-161646940;1:161483000-161621200;chr1:161484700-161541000;1:161488422-161634845;chr1:161488444-161519959;1:161488445-161519959;1:161488445-161519959;1:161509489-161646576\t0.1000\tDDD:3093;dbVar\tchr1:161485000-161522125;1:161488422-161634845;chr1:161488444-161519959\t0.0769\t\t\t\tIMH\t1:4599855-170869838;1:17124869-234920285;1:69129973-188838391;1:76428346-179322403;1:108097960-232960701\t0.3095\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t92.43\t\t\t\t0.0515701444991238\t-0.213860724130331\tautosomal recessive primary immunodeficiency with defective spontaneous natural killer cell cytotoxicity\tAR\tSupportive\t23006327[PMID]\t2214\t146740\tImmunodeficiency 20, 615707 (3) AR\tAR\tyes\t\t8\t3.6955e-06\t1.2227e-05\t\t\tfull=4\n1_161518601_161519950_DEL_1\t1\t161518601\t161519950\t-1349\tDEL\tNA\tfull\tq23.3\tFCGR3A\tHSPA6\tFCGR2C\t1\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tdbVar:nssv15156967;dbVar:nssv15156970;dbVar:nssv15149867;nssv15151118;dbVar:nssv15127572;dbVar:nssv15148250;dbVar:nssv15133506\t1:47852-249228449;1:82155-249218992;1:849468-249224684;1:145764500-249233096;1:149825832-180236332;1:157717037-175990383\t0.00;0.00;0.00;0.00;0.00;0.01\tImmunodeficiency 20, 615707 (3) AR\t\tdbVar:nssv15129680;dbVar:nssv15777243;dbVar:nssv15143225;dbVar:nssv15132112;dbVar:nssv15156891;dbVar:nssv15606086;dbVar:nssv17970186;morbid:FCGR3A\t1:146053395-249233096;1:157321300-167391423;1:159343439-161918472;1:159449678-166864323;1:159815643-177026983;1:160369891-175796325;1:160417297-166197042;1:161511549-161520527\t0.00;0.01;0.05;0.02;0.01;0.01;0.02;15.04\t\t\t1000g;DDD:3093;dbVar;esv3587730;gnomAD-SV_v2.1_DUP_1_2488;nsv514915\tchr1:161480422-161646940;1:161483000-161621200;chr1:161484700-161541000;1:161488422-161634845;chr1:161488444-161519959;1:161488445-161519959;1:161488445-161519959;1:161509489-161646576\t0.1000\tDDD:3093;dbVar\tchr1:161485000-161522125;1:161488422-161634845;chr1:161488444-161519959\t0.0769\t\t\t\tIMH\t1:4599855-170869838;1:17124869-234920285;1:69129973-188838391;1:76428346-179322403;1:108097960-232960701\t0.3095\t\t\t1:161483000-161621200 gnomAD-SV_v2.1_DUP_1_2488;1:161488422-161634845 DDD:3093;1:161488445-161519959 1000g;1:161509489-161646576 nsv514915\tchr1:161480422-161646940 dbVar;chr1:161484700-161541000 dbVar;chr1:161488444-161519959 dbVar;1:161488445-161519959 esv3587730\t\t\t1:161488422-161634845 DDD:3093;chr1:161519612-161593482 dbVar;1:161519613-161593482 esv3587731\tchr1:161485000-161522125 dbVar;chr1:161488444-161519959 dbVar;1:161519613-161593482 1000g\t\t\t0.535\t0.545\t\t\t\t\t\t\t1:161479598-161518642;1:161518644-161565122\t1:161518644-161565122\t\t\t\t\t\t\t\t92.43\t\t\t\t0.0515701444991238\t-0.213860724130331\t\t\t\t\t\t146740\t\t\tyes\t\t8\t3.6955e-06\t1.2227e-05\t0.9\t1A (cf Gene_count, RE_gene, +0.00);2C-1 (FCGR3A, +0.90);3A (1 gene, +0.00);5F (+0.00)\t4\n1_161518601_161519950_DEL_1\t1\t161518601\t161519950\t-1349\tDEL\tNA\tsplit\tq23.3\tFCGR3A\t\t\t\tNM_001127592\t2\t161511548\t161519893\t1293\t376\t34\tyes\t5\ttxStart-intron2\t5'UTR-CDS\t135\t3'\t161518600\t161519893\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t1000g;DDD:3093;dbVar;esv3587730;gnomAD-SV_v2.1_DUP_1_2488;nsv514915\tchr1:161480422-161646940;1:161483000-161621200;chr1:161484700-161541000;1:161488422-161634845;chr1:161488444-161519959;1:161488445-161519959;1:161488445-161519959;1:161509489-161646576\t0.1000\tDDD:3093;dbVar\tchr1:161485000-161522125;1:161488422-161634845;chr1:161488444-161519959\t0.0769\t\t\t\tIMH\t1:4599855-170869838;1:17124869-234920285;1:69129973-188838391;1:76428346-179322403;1:108097960-232960701\t0.3095\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t92.43\t\t\t\t0.0515701444991238\t-0.213860724130331\tautosomal recessive primary immunodeficiency with defective spontaneous natural killer cell cytotoxicity\tAR\tSupportive\t23006327[PMID]\t2214\t146740\tImmunodeficiency 20, 615707 (3) AR\tAR\tyes\t\t8\t3.6955e-06\t1.2227e-05\t\t\tfull=4\n1_161518811_161519500_DEL_1\t1\t161518811\t161519500\t-689\tDEL\tNA\tfull\tq23.3\tFCGR3A\tHSPA6\tFCGR2C\t1\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tdbVar:nssv15156967;dbVar:nssv15156970;dbVar:nssv15149867;nssv15151118;dbVar:nssv15127572;dbVar:nssv15148250;dbVar:nssv15133506\t1:47852-249228449;1:82155-249218992;1:849468-249224684;1:145764500-249233096;1:149825832-180236332;1:157717037-175990383\t0.00;0.00;0.00;0.00;0.00;0.00\tImmunodeficiency 20, 615707 (3) AR\t\tdbVar:nssv15129680;dbVar:nssv15777243;dbVar:nssv15143225;dbVar:nssv15132112;dbVar:nssv15156891;dbVar:nssv15606086;dbVar:nssv17970186;morbid:FCGR3A\t1:146053395-249233096;1:157321300-167391423;1:159343439-161918472;1:159449678-166864323;1:159815643-177026983;1:160369891-175796325;1:160417297-166197042;1:161511549-161520527\t0.00;0.01;0.03;0.01;0.00;0.00;0.01;7.68\t\t\t1000g;DDD:3093;dbVar;esv3587730;gnomAD-SV_v2.1_DUP_1_2488;nsv514915\tchr1:161480422-161646940;1:161483000-161621200;chr1:161484700-161541000;1:161488422-161634845;chr1:161488444-161519959;1:161488445-161519959;1:161488445-161519959;1:161509489-161646576\t0.1000\tDDD:3093;dbVar\tchr1:161485000-161522125;1:161488422-161634845;chr1:161488444-161519959\t0.0769\t\t\t\tIMH\t1:4599855-170869838;1:17124869-234920285;1:69129973-188838391;1:76428346-179322403;1:108097960-232960701\t0.3095\t\t\t1:161483000-161621200 gnomAD-SV_v2.1_DUP_1_2488;1:161488422-161634845 DDD:3093;1:161488445-161519959 1000g;1:161509489-161646576 nsv514915\tchr1:161480422-161646940 dbVar;chr1:161484700-161541000 dbVar;chr1:161488444-161519959 dbVar;1:161488445-161519959 esv3587730\t\t\t1:161488422-161634845 DDD:3093;\tchr1:161485000-161522125 dbVar;chr1:161488444-161519959 dbVar\t\t\t0.450\t0.535\t\t\t\t\t\t\t1:161518644-161565122\t1:161518644-161565122\t\t\t\t\t\t\t\t92.43\t\t\t\t0.0515701444991238\t-0.213860724130331\t\t\t\t\t\t146740\t\t\tyes\t\t8\t3.6955e-06\t1.2227e-05\t0.9\t1A (cf Gene_count, RE_gene, +0.00);2E-1 (FCGR3A, +0.90);3A (1 gene, +0.00);5F (+0.00)\t4\n1_161518811_161519500_DEL_1\t1\t161518811\t161519500\t-689\tDEL\tNA\tsplit\tq23.3\tFCGR3A\t\t\t\tNM_000569\t8\t161511548\t161519608\t690\t25\t3\tyes\t5\texon1-exon2\tCDS\t10\t5'\t161518810\t161519500\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t1000g;DDD:3093;dbVar;esv3587730;gnomAD-SV_v2.1_DUP_1_2488;nsv514915\tchr1:161480422-161646940;1:161483000-161621200;chr1:161484700-161541000;1:161488422-161634845;chr1:161488444-161519959;1:161488445-161519959;1:161488445-161519959;1:161509489-161646576\t0.1000\tDDD:3093;dbVar\tchr1:161485000-161522125;1:161488422-161634845;chr1:161488444-161519959\t0.0769\t\t\t\tIMH\t1:4599855-170869838;1:17124869-234920285;1:69129973-188838391;1:76428346-179322403;1:108097960-232960701\t0.3095\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t92.43\t\t\t\t0.0515701444991238\t-0.213860724130331\tautosomal recessive primary immunodeficiency with defective spontaneous natural killer cell cytotoxicity\tAR\tSupportive\t23006327[PMID]\t2214\t146740\tImmunodeficiency 20, 615707 (3) AR\tAR\tyes\t\t8\t3.6955e-06\t1.2227e-05\t\t\tfull=4\n1_161518811_161519850_DEL_1\t1\t161518811\t161519850\t-1039\tDEL\tNA\tfull\tq23.3\tFCGR3A\tHSPA6\tFCGR2C\t1\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tdbVar:nssv15156967;dbVar:nssv15156970;dbVar:nssv15149867;nssv15151118;dbVar:nssv15127572;dbVar:nssv15148250;dbVar:nssv15133506\t1:47852-249228449;1:82155-249218992;1:849468-249224684;1:145764500-249233096;1:149825832-180236332;1:157717037-175990383\t0.00;0.00;0.00;0.00;0.00;0.01\tImmunodeficiency 20, 615707 (3) AR\t\tdbVar:nssv15129680;dbVar:nssv15777243;dbVar:nssv15143225;dbVar:nssv15132112;dbVar:nssv15156891;dbVar:nssv15606086;dbVar:nssv17970186;morbid:FCGR3A\t1:146053395-249233096;1:157321300-167391423;1:159343439-161918472;1:159449678-166864323;1:159815643-177026983;1:160369891-175796325;1:160417297-166197042;1:161511549-161520527\t0.00;0.01;0.04;0.01;0.01;0.01;0.02;11.58\t\t\t1000g;DDD:3093;dbVar;esv3587730;gnomAD-SV_v2.1_DUP_1_2488;nsv514915\tchr1:161480422-161646940;1:161483000-161621200;chr1:161484700-161541000;1:161488422-161634845;chr1:161488444-161519959;1:161488445-161519959;1:161488445-161519959;1:161509489-161646576\t0.1000\tDDD:3093;dbVar\tchr1:161485000-161522125;1:161488422-161634845;chr1:161488444-161519959\t0.0769\t\t\t\tIMH\t1:4599855-170869838;1:17124869-234920285;1:69129973-188838391;1:76428346-179322403;1:108097960-232960701\t0.3095\t\t\t1:161483000-161621200 gnomAD-SV_v2.1_DUP_1_2488;1:161488422-161634845 DDD:3093;1:161488445-161519959 1000g;1:161509489-161646576 nsv514915\tchr1:161480422-161646940 dbVar;chr1:161484700-161541000 dbVar;chr1:161488444-161519959 dbVar;1:161488445-161519959 esv3587730\t\t\t1:161488422-161634845 DDD:3093;chr1:161519612-161593482 dbVar;1:161519613-161593482 esv3587731\tchr1:161485000-161522125 dbVar;chr1:161488444-161519959 dbVar;1:161519613-161593482 1000g\t\t\t0.450\t0.570\t\t\t\t\t\t\t1:161518644-161565122\t1:161518644-161565122\t\t\t\t\t\t\t\t92.43\t\t\t\t0.0515701444991238\t-0.213860724130331\t\t\t\t\t\t146740\t\t\tyes\t\t8\t3.6955e-06\t1.2227e-05\t0.9\t1A (cf Gene_count, RE_gene, +0.00);2C-1 (FCGR3A, +0.90);3A (1 gene, +0.00);5F (+0.00)\t4\n1_161518811_161519850_DEL_1\t1\t161518811\t161519850\t-1039\tDEL\tNA\tsplit\tq23.3\tFCGR3A\t\t\t\tNM_001127592\t2\t161511548\t161519893\t1040\t366\t33\tno\t5\texon1-exon2\t5'UTR-CDS\t10\t5'\t161518810\t161519850\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t1000g;DDD:3093;dbVar;esv3587730;gnomAD-SV_v2.1_DUP_1_2488;nsv514915\tchr1:161480422-161646940;1:161483000-161621200;chr1:161484700-161541000;1:161488422-161634845;chr1:161488444-161519959;1:161488445-161519959;1:161488445-161519959;1:161509489-161646576\t0.1000\tDDD:3093;dbVar\tchr1:161485000-161522125;1:161488422-161634845;chr1:161488444-161519959\t0.0769\t\t\t\tIMH\t1:4599855-170869838;1:17124869-234920285;1:69129973-188838391;1:76428346-179322403;1:108097960-232960701\t0.3095\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t92.43\t\t\t\t0.0515701444991238\t-0.213860724130331\tautosomal recessive primary immunodeficiency with defective spontaneous natural killer cell cytotoxicity\tAR\tSupportive\t23006327[PMID]\t2214\t146740\tImmunodeficiency 20, 615707 (3) AR\tAR\tyes\t\t8\t3.6955e-06\t1.2227e-05\t\t\tfull=4\n1_161511001_161512900_DEL_1\t1\t161511001\t161512900\t-1899\tDEL\tNA\tfull\tq23.3\tFCGR3A\tHSPA6\tFCGR2C\t1\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tdbVar:nssv15156967;dbVar:nssv15156970;dbVar:nssv15149867;nssv15151118;dbVar:nssv15127572;dbVar:nssv15148250;dbVar:nssv15133506\t1:47852-249228449;1:82155-249218992;1:849468-249224684;1:145764500-249233096;1:149825832-180236332;1:157717037-175990383\t0.00;0.00;0.00;0.00;0.01;0.01\tImmunodeficiency 20, 615707 (3) AR\t\tdbVar:nssv15129680;dbVar:nssv15777243;dbVar:nssv15143225;dbVar:nssv15132112;dbVar:nssv15156891;dbVar:nssv15606086;dbVar:nssv17970186;morbid:FCGR3A\t1:146053395-249233096;1:157321300-167391423;1:159343439-161918472;1:159449678-166864323;1:159815643-177026983;1:160369891-175796325;1:160417297-166197042;1:161511549-161520527\t0.00;0.02;0.07;0.03;0.01;0.01;0.03;15.06\t\t\t1000g;DDD:3093;dbVar;esv3587730;gnomAD-SV_v2.1_DUP_1_2488;nsv514915\tchr1:161480422-161646940;1:161483000-161621200;chr1:161484700-161541000;1:161488422-161634845;chr1:161488444-161519959;1:161488445-161519959;1:161488445-161519959;1:161509489-161646576\t0.1000\tDDD:3093;dbVar\tchr1:161485000-161522125;1:161488422-161634845;chr1:161488444-161519959\t0.0769\t\t\t\tIMH\t1:4599855-170869838;1:17124869-234920285;1:69129973-188838391;1:76428346-179322403;1:108097960-232960701\t0.3095\t\t\t1:161483000-161621200 gnomAD-SV_v2.1_DUP_1_2488;1:161488422-161634845 DDD:3093;1:161488445-161519959 1000g;1:161509489-161646576 nsv514915\tchr1:161480422-161646940 dbVar;chr1:161484700-161541000 dbVar;chr1:161488444-161519959 dbVar;1:161488445-161519959 esv3587730\t\t\t1:161488422-161634845 DDD:3093;\tchr1:161485000-161522125 dbVar;chr1:161488444-161519959 dbVar\t\t\t0.435\t0.425\t1:161510916-161511163\tL2c\t\t\t\t\t1:161479598-161518642\t1:161479598-161518642\t\t\t\t\t\t\t\t92.43\t\t\t\t0.0515701444991238\t-0.213860724130331\t\t\t\t\t\t146740\t\t\tyes\t\t8\t3.6955e-06\t1.2227e-05\t0.45\t1A (cf Gene_count, RE_gene, +0.00);2D-3 (FCGR3A, +0.45);3A (1 gene, +0.00);5F (+0.00)\t3\n1_161511001_161512900_DEL_1\t1\t161511001\t161512900\t-1899\tDEL\tNA\tsplit\tq23.3\tFCGR3A\t\t\t\tNM_000569\t8\t161511548\t161519608\t1352\t99\t12\tno\t5\texon5-txEnd\tCDS-3'UTR\t89\t3'\t161511548\t161512900\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t1000g;DDD:3093;dbVar;esv3587730;gnomAD-SV_v2.1_DUP_1_2488;nsv514915\tchr1:161480422-161646940;1:161483000-161621200;chr1:161484700-161541000;1:161488422-161634845;chr1:161488444-161519959;1:161488445-161519959;1:161488445-161519959;1:161509489-161646576\t0.1000\tDDD:3093;dbVar\tchr1:161485000-161522125;1:161488422-161634845;chr1:161488444-161519959\t0.0769\t\t\t\tIMH\t1:4599855-170869838;1:17124869-234920285;1:69129973-188838391;1:76428346-179322403;1:108097960-232960701\t0.3095\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t92.43\t\t\t\t0.0515701444991238\t-0.213860724130331\tautosomal recessive primary immunodeficiency with defective spontaneous natural killer cell cytotoxicity\tAR\tSupportive\t23006327[PMID]\t2214\t146740\tImmunodeficiency 20, 615707 (3) AR\tAR\tyes\t\t8\t3.6955e-06\t1.2227e-05\t\t\tfull=3\n1_161511001_161511600_DEL_1\t1\t161511001\t161511600\t-599\tDEL\tNA\tfull\tq23.3\tFCGR3A\tHSPA6\tFCGR2C\t1\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tdbVar:nssv15156967;dbVar:nssv15156970;dbVar:nssv15149867;nssv15151118;dbVar:nssv15127572;dbVar:nssv15148250;dbVar:nssv15133506\t1:47852-249228449;1:82155-249218992;1:849468-249224684;1:145764500-249233096;1:149825832-180236332;1:157717037-175990383\t0.00;0.00;0.00;0.00;0.00;0.00\tImmunodeficiency 20, 615707 (3) AR\t\tdbVar:nssv15129680;dbVar:nssv15777243;dbVar:nssv15143225;dbVar:nssv15132112;dbVar:nssv15156891;dbVar:nssv15606086;dbVar:nssv17970186;morbid:FCGR3A\t1:146053395-249233096;1:157321300-167391423;1:159343439-161918472;1:159449678-166864323;1:159815643-177026983;1:160369891-175796325;1:160417297-166197042;1:161511549-161520527\t0.00;0.01;0.02;0.01;0.00;0.00;0.01;0.58\t\t\t1000g;DDD:3093;dbVar;esv3587730;gnomAD-SV_v2.1_DUP_1_2488;nsv514915\tchr1:161480422-161646940;1:161483000-161621200;chr1:161484700-161541000;1:161488422-161634845;chr1:161488444-161519959;1:161488445-161519959;1:161488445-161519959;1:161509489-161646576\t0.1000\tDDD:3093;dbVar\tchr1:161485000-161522125;1:161488422-161634845;chr1:161488444-161519959\t0.0769\t\t\t\tIMH\t1:4599855-170869838;1:17124869-234920285;1:69129973-188838391;1:76428346-179322403;1:108097960-232960701\t0.3095\t\t\t1:161483000-161621200 gnomAD-SV_v2.1_DUP_1_2488;1:161488422-161634845 DDD:3093;1:161488445-161519959 1000g;1:161509489-161646576 nsv514915\tchr1:161480422-161646940 dbVar;chr1:161484700-161541000 dbVar;chr1:161488444-161519959 dbVar;1:161488445-161519959 esv3587730\t\t\t1:161488422-161634845 DDD:3093;\tchr1:161485000-161522125 dbVar;chr1:161488444-161519959 dbVar\t\t\t0.435\t0.335\t1:161510916-161511163\tL2c\t1:161511571-161511646\tL3\t\t\t1:161479598-161518642\t1:161479598-161518642\t\t\t\t\t\t\t\t92.43\t\t\t\t0.0515701444991238\t-0.213860724130331\t\t\t\t\t\t146740\t\t\tyes\t\t8\t3.6955e-06\t1.2227e-05\t-1.0\t1A (cf Gene_count, RE_gene, +0.00);2F/4O (cf B_loss_source, -1.00);2B (cf po_P_loss_source, HI and OMIM_morbid, +0.00);2D-1 (FCGR3A,+0.00);3A (1 gene, +0.00);5F (+0.00)\t1\n1_161511001_161511600_DEL_1\t1\t161511001\t161511600\t-599\tDEL\tNA\tsplit\tq23.3\tFCGR3A\t\t\t\tNM_000569\t8\t161511548\t161519608\t52\t0\t0\tno\t5\texon5-txEnd\t3'UTR\t1389\t3'\t161511548\t161511600\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t1000g;DDD:3093;dbVar;esv3587730;gnomAD-SV_v2.1_DUP_1_2488;nsv514915\tchr1:161480422-161646940;1:161483000-161621200;chr1:161484700-161541000;1:161488422-161634845;chr1:161488444-161519959;1:161488445-161519959;1:161488445-161519959;1:161509489-161646576\t0.1000\tDDD:3093;dbVar\tchr1:161485000-161522125;1:161488422-161634845;chr1:161488444-161519959\t0.0769\t\t\t\tIMH\t1:4599855-170869838;1:17124869-234920285;1:69129973-188838391;1:76428346-179322403;1:108097960-232960701\t0.3095\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t92.43\t\t\t\t0.0515701444991238\t-0.213860724130331\tautosomal recessive primary immunodeficiency with defective spontaneous natural killer cell cytotoxicity\tAR\tSupportive\t23006327[PMID]\t2214\t146740\tImmunodeficiency 20, 615707 (3) AR\tAR\tyes\t\t8\t3.6955e-06\t1.2227e-05\t\t\tfull=1\n1_161511001_161519950_DEL_1\t1\t161511001\t161519950\t-8949\tDEL\tNA\tfull\tq23.3\tFCGR3A\tHSPA6\tFCGR2C\t1\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tATF6 (morbid/RE=EA_enhancer);MPZ (morbid/RE=EA_enhancer);SDHC (HI=3/morbid/RE=EA_enhancer)\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tdbVar:nssv15156967;dbVar:nssv15156970;dbVar:nssv15149867;nssv15151118;dbVar:nssv15127572;dbVar:nssv15148250;dbVar:nssv15133506\t1:47852-249228449;1:82155-249218992;1:849468-249224684;1:145764500-249233096;1:149825832-180236332;1:157717037-175990383\t0.00;0.00;0.00;0.01;0.03;0.05\tImmunodeficiency 20, 615707 (3) AR\t\tdbVar:nssv15129680;dbVar:nssv15777243;dbVar:nssv15143225;dbVar:nssv15132112;dbVar:nssv15156891;dbVar:nssv15606086;dbVar:nssv17970186;morbid:FCGR3A\t1:146053395-249233096;1:157321300-167391423;1:159343439-161918472;1:159449678-166864323;1:159815643-177026983;1:160369891-175796325;1:160417297-166197042;1:161511549-161520527\t0.01;0.09;0.35;0.12;0.05;0.06;0.15;93.57\t\t\t1000g;DDD:3093;dbVar;esv3587730;gnomAD-SV_v2.1_DUP_1_2488;nsv514915\tchr1:161480422-161646940;1:161483000-161621200;chr1:161484700-161541000;1:161488422-161634845;chr1:161488444-161519959;1:161488445-161519959;1:161488445-161519959;1:161509489-161646576\t0.1000\tDDD:3093;dbVar\tchr1:161485000-161522125;1:161488422-161634845;chr1:161488444-161519959\t0.0769\t\t\t\tIMH\t1:4599855-170869838;1:17124869-234920285;1:69129973-188838391;1:76428346-179322403;1:108097960-232960701\t0.3095\t\t\t1:161483000-161621200 gnomAD-SV_v2.1_DUP_1_2488;1:161488422-161634845 DDD:3093;1:161488445-161519959 1000g;1:161509489-161646576 nsv514915\tchr1:161480422-161646940 dbVar;chr1:161484700-161541000 dbVar;chr1:161488444-161519959 dbVar;1:161488445-161519959 esv3587730\t\t\t1:161488422-161634845 DDD:3093;chr1:161519612-161593482 dbVar;1:161519613-161593482 esv3587731\tchr1:161485000-161522125 dbVar;chr1:161488444-161519959 dbVar;1:161519613-161593482 1000g\t\t\t0.435\t0.545\t1:161510916-161511163\tL2c\t\t\t\t\t1:161479598-161518642\t1:161518644-161565122\t\t\t\t\t\t\t\t92.43\t\t\t\t0.0515701444991238\t-0.213860724130331\t\t\t\t\t\t146740\t\t\tyes\t\t8\t3.6955e-06\t1.2227e-05\t-1.0\t1A (cf Gene_count, RE_gene, +0.00);2F/4O (cf B_loss_source, -1.00);2B (cf po_P_loss_source, HI and OMIM_morbid, +0.00);3A (1 gene, +0.00);5F (+0.00)\t1\n1_161511001_161519950_DEL_1\t1\t161511001\t161519950\t-8949\tDEL\tNA\tsplit\tq23.3\tFCGR3A\t\t\t\tNM_001127592\t2\t161511548\t161519893\t8345\t1077\t100\tno\t5\ttxStart-txEnd\t5'UTR-3'UTR\t\t\t161511548\t161519893\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t1000g;DDD:3093;dbVar;esv3587730;gnomAD-SV_v2.1_DUP_1_2488;nsv514915\tchr1:161480422-161646940;1:161483000-161621200;chr1:161484700-161541000;1:161488422-161634845;chr1:161488444-161519959;1:161488445-161519959;1:161488445-161519959;1:161509489-161646576\t0.1000\tDDD:3093;dbVar\tchr1:161485000-161522125;1:161488422-161634845;chr1:161488444-161519959\t0.0769\t\t\t\tIMH\t1:4599855-170869838;1:17124869-234920285;1:69129973-188838391;1:76428346-179322403;1:108097960-232960701\t0.3095\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t92.43\t\t\t\t0.0515701444991238\t-0.213860724130331\tautosomal recessive primary immunodeficiency with defective spontaneous natural killer cell cytotoxicity\tAR\tSupportive\t23006327[PMID]\t2214\t146740\tImmunodeficiency 20, 615707 (3) AR\tAR\tyes\t\t8\t3.6955e-06\t1.2227e-05\t\t\tfull=1\n1_161512001_161512500_DEL_1\t1\t161512001\t161512500\t-499\tDEL\tNA\tfull\tq23.3\tFCGR3A\tHSPA6\tFCGR2C\t1\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tdbVar:nssv15156967;dbVar:nssv15156970;dbVar:nssv15149867;nssv15151118;dbVar:nssv15127572;dbVar:nssv15148250;dbVar:nssv15133506\t1:47852-249228449;1:82155-249218992;1:849468-249224684;1:145764500-249233096;1:149825832-180236332;1:157717037-175990383\t0.00;0.00;0.00;0.00;0.00;0.00\tImmunodeficiency 20, 615707 (3) AR\t\tdbVar:nssv15129680;dbVar:nssv15777243;dbVar:nssv15143225;dbVar:nssv15132112;dbVar:nssv15156891;dbVar:nssv15606086;dbVar:nssv17970186;morbid:FCGR3A\t1:146053395-249233096;1:157321300-167391423;1:159343439-161918472;1:159449678-166864323;1:159815643-177026983;1:160369891-175796325;1:160417297-166197042;1:161511549-161520527\t0.00;0.00;0.02;0.01;0.00;0.00;0.01;5.57\t\t\t1000g;DDD:3093;dbVar;esv3587730;gnomAD-SV_v2.1_DUP_1_2488;nsv514915\tchr1:161480422-161646940;1:161483000-161621200;chr1:161484700-161541000;1:161488422-161634845;chr1:161488444-161519959;1:161488445-161519959;1:161488445-161519959;1:161509489-161646576\t0.1000\tDDD:3093;dbVar\tchr1:161485000-161522125;1:161488422-161634845;chr1:161488444-161519959\t0.0769\t\t\t\tIMH\t1:4599855-170869838;1:17124869-234920285;1:69129973-188838391;1:76428346-179322403;1:108097960-232960701\t0.3095\t\t\t1:161483000-161621200 gnomAD-SV_v2.1_DUP_1_2488;1:161488422-161634845 DDD:3093;1:161488445-161519959 1000g;1:161509489-161646576 nsv514915\tchr1:161480422-161646940 dbVar;chr1:161484700-161541000 dbVar;chr1:161488444-161519959 dbVar;1:161488445-161519959 esv3587730\t\t\t1:161488422-161634845 DDD:3093;\tchr1:161485000-161522125 dbVar;chr1:161488444-161519959 dbVar\t\t\t0.490\t0.360\t\t\t\t\t\t\t1:161479598-161518642\t1:161479598-161518642\t\t\t\t\t\t\t\t92.43\t\t\t\t0.0515701444991238\t-0.213860724130331\t\t\t\t\t\t146740\t\t\tyes\t\t8\t3.6955e-06\t1.2227e-05\t-1.0\t1A (cf Gene_count, RE_gene, +0.00);2F/4O (cf B_loss_source, -1.00);2B (cf po_P_loss_source, HI and OMIM_morbid, +0.00);2D-1 (FCGR3A,+0.00);3A (1 gene, +0.00);5F (+0.00)\t1\n1_161512001_161512500_DEL_1\t1\t161512001\t161512500\t-499\tDEL\tNA\tsplit\tq23.3\tFCGR3A\t\t\t\tNM_000569\t8\t161511548\t161519608\t500\t0\t0\tno\t5\texon5-exon5\t3'UTR\t489\t3'\t161512000\t161512500\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t1000g;DDD:3093;dbVar;esv3587730;gnomAD-SV_v2.1_DUP_1_2488;nsv514915\tchr1:161480422-161646940;1:161483000-161621200;chr1:161484700-161541000;1:161488422-161634845;chr1:161488444-161519959;1:161488445-161519959;1:161488445-161519959;1:161509489-161646576\t0.1000\tDDD:3093;dbVar\tchr1:161485000-161522125;1:161488422-161634845;chr1:161488444-161519959\t0.0769\t\t\t\tIMH\t1:4599855-170869838;1:17124869-234920285;1:69129973-188838391;1:76428346-179322403;1:108097960-232960701\t0.3095\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t92.43\t\t\t\t0.0515701444991238\t-0.213860724130331\tautosomal recessive primary immunodeficiency with defective spontaneous natural killer cell cytotoxicity\tAR\tSupportive\t23006327[PMID]\t2214\t146740\tImmunodeficiency 20, 615707 (3) AR\tAR\tyes\t\t8\t3.6955e-06\t1.2227e-05\t\t\tfull=1\n"
  },
  {
    "path": "tests/AnnotSV/test_04_ExternalBEDannotationFiles/command_Tcl.sh",
    "content": "#!/bin/bash -x\n\nset -eo pipefail\n\n\ncut=\"$ANNOTSV/tests/AnnotSV/scripts/cutWithColumnNames.tcl\"\n\n# Check the use of an external BED file (provided by the user)\n##############################################################\n#\n# User_BED_file_1 = ./input/user_FtIncludedInSV.bed\n# User_BED_file_2 = ./input/user_SVincludedInFt.bed\n\n\nUser_BED_file_1=\"./input/user_FtIncludedInSV.bed\"\nUser_BED_file_2=\"./input/user_SVincludedInFt.bed\"\n\n\ncp \"$User_BED_file_1\" $ANNOTSV/share/AnnotSV/Annotations_Human/Users/GRCh37/FtIncludedInSV/\ncp \"$User_BED_file_2\" $ANNOTSV/share/AnnotSV/Annotations_Human/Users/GRCh37/SVincludedInFt\n\nmkdir -p ./output\nrm -f \"./output/test_tcl.annotated.tsv\" \"./output/output.log\"\n$ANNOTSV/bin/AnnotSV -SVinputFile \"./input/test.bed\" -SVinputInfo 1 -outputFile \"./output/test_tcl.annotated.tsv\" -svtBEDcol 5 -overlap 70 -genomeBuild GRCh37 &> \"./output/output.log\"\n\n\n# Validation of the use of \"User_BED_file_1\"\n############################################\nif [ `grep -c \"AAAAAAAAAAAAAAAAAAAA\" \"./output/output.log\"` == 2 ] && [ `grep -c \"FtIncludedInSV\" \"./output/output.log\"` == 1 ]\nthen\n\techo \"Ok\"\nelse\n        echo \"error 1: $User_BED_file_1 not used!\"\n        exit 1\nfi\n\n# Validation of the use of \"User_BED_file_2\"\n############################################\nif [ `grep -c \"BBBBBBBBBBBBBBBBBBBB\" \"./output/output.log\"` == 2 ] && [ `grep -c \"SVincludedInFt\" \"./output/output.log\"` == 1 ]\nthen\n        echo \"Ok\"\nelse\n        echo \"error 1: $User_BED_file_2 not used!\"\n        exit 1\nfi\n\n\n# The output columns should have \"SVincludedInFt\" and \"FtIncludedInSV\" annotations\n##################################################################################\nannotations=`$cut \"./output/test_tcl.annotated.tsv\" \"BBBBBBBBBBBBBBBBBBBB\"`\nif [ `echo $annotations | tr \" \" \"\\n\" | grep -c \"SVincludedInFt\"` == 9 ]\nthen\n        echo \"Ok\"\nelse\n        echo \"error 1: SVincludedInFt annotations NOT present in the output file \"\n        exit 1\nfi\n\nannotations=`$cut \"./output/test_tcl.annotated.tsv\" \"AAAAAAAAAAAAAAAAAAAA\"`\nif [ `echo $annotations | tr \" \" \"\\n\" | grep -c \"FtIncludedInSV\"` == 2 ]\nthen\n        echo \"Ok\"\nelse\n        echo \"error 1: FtIncludedInSV annotations NOT present in the output file \"\n        exit 1\nfi\n\n\n# Clean\n#######\nrm $ANNOTSV/share/AnnotSV/Annotations_Human/Users/GRCh37/FtIncludedInSV/user_FtIncludedInSV.*\nrm $ANNOTSV/share/AnnotSV/Annotations_Human/Users/GRCh37/SVincludedInFt/user_SVincludedInFt.*\n\n\n\necho \"ok - Finished\"\n\n"
  },
  {
    "path": "tests/AnnotSV/test_04_ExternalBEDannotationFiles/input/test.bed",
    "content": "#chrom\tstart\tend\ttutu\tSV type\n1\t2902537\t3529849\tii\tDEL\n"
  },
  {
    "path": "tests/AnnotSV/test_04_ExternalBEDannotationFiles/input/user_FtIncludedInSV.bed",
    "content": "#chrom\tstart\tend\tAAAAAAAAAAAAAAAAAAAA\n1\t3002537\t3429849\tFtIncludedInSV\n"
  },
  {
    "path": "tests/AnnotSV/test_04_ExternalBEDannotationFiles/input/user_SVincludedInFt.bed",
    "content": "#chrom\tstart\tend\tBBBBBBBBBBBBBBBBBBBB\n1\t1902537\t4529849\tSVincludedInFt\n"
  },
  {
    "path": "tests/AnnotSV/test_05_BEDwithoutHeader/command_Tcl.sh",
    "content": "#!/bin/bash -x\n\nset -eo pipefail\n\n\n# Check input BED file with header\n##################################\n# more input/test.bed\n# ---------------------------------------------\n# #chrom  start   end     tutu    SV type\n# 1       2902537 3529849 ii      DEL\n# ---------------------------------------------\n# => We should have the \"tutu\" annotation column (extracted from the BED input file)\n\n# Check input BED file without header\n#####################################\n# \n# more input/test.withoutHeader.bed\n# ---------------------------------------------\n# 1       2902537 3529849 ii      DEL\n# ---------------------------------------------\n\n# output colum names NOT given in the input file:\n# => only \"SV_type\" should be in the output\n# => we should not have \"tutu\" anymore, but \"user#1\"\n# ---------------------------------------------\n# user#1\n# ii\n# ii\n# ii\n# ii\n# ii\n# ii\n# ii\n# ii\n# ---------------------------------------------\n\n\n\n# Input BED file with header\n############################\nmkdir -p ./output\nrm -f \"./output/test_tcl.annotated.tsv\"\n$ANNOTSV/bin/AnnotSV -SVinputFile \"./input/test.bed\" -SVinputInfo 1 -outputFile \"./output/test_tcl.annotated.tsv\" -svtBEDcol 5 -overlap 70 -genomeBuild GRCh37\n\n# Check if the \"tutu\" annotation column from the BED file was added\nif [ `grep -c \"tutu\" \"./output/test_tcl.annotated.tsv\"` == 1 ]\nthen\n        echo \"Ok\"\nelse\n        echo \"error 1: \\\"tutu\\\" annotation column from the input BED file NOT added\"\n        exit 1\nfi\n\n\n# Input BED file without header\n###############################\nrm -f \"./output/test.withoutHeader_tcl.annotated.tsv\"\n$ANNOTSV/bin/AnnotSV -SVinputFile \"./input/test.withoutHeader.bed\" -SVinputInfo 1 -outputFile \"./output/test.withoutHeader_tcl.annotated.tsv\" -svtBEDcol 5 -overlap 70 -genomeBuild GRCh37 \n\n# Check if the \"SV_type\" annotation column from the BED file was added\nif [ `grep -c \"SV_type\" \"./output/test_tcl.annotated.tsv\"` == 1 ]\nthen\n        echo \"Ok\"\nelse\n        echo \"error 1: \\\"SV_type\\\" annotation column from the input BED file NOT added\"\n        exit 1\nfi\n\n\n# Check if the \"user#1\" annotation column from the BED file was added\nif [ `grep -c \"user#1\" \"./output/test.withoutHeader_tcl.annotated.tsv\"` == 1 ]\nthen\n        echo \"Ok\"\nelse\n        echo \"error 1: \\\"user#1\\\" annotation column from the input BED file NOT added\"\n        exit 1\nfi\n\n\n\necho \"ok - Finished\"\n\n\n\n"
  },
  {
    "path": "tests/AnnotSV/test_05_BEDwithoutHeader/input/test.bed",
    "content": "#chrom\tstart\tend\ttutu\tSV type\n1\t2902537\t3529849\tii\tDEL\n"
  },
  {
    "path": "tests/AnnotSV/test_05_BEDwithoutHeader/input/test.withoutHeader.bed",
    "content": "1\t2902537\t3529849\tii\tDEL\n"
  },
  {
    "path": "tests/AnnotSV/test_06_VCFfromLumpy/command_Tcl.sh",
    "content": "#!/bin/bash -x\n\nset -eo pipefail\n\n\ncut=\"$ANNOTSV/tests/AnnotSV/scripts/cutWithColumnNames.tcl\"\n\nfunction exists_in_list() {\n    LIST=$1\n    DELIMITER=$2\n    VALUE=$3\n    [[ \"$LIST\" =~ ($DELIMITER|^)$VALUE($DELIMITER|$) ]]\n}\n\n\n# Check that no column is shifted\n#################################\n\n# Check the number of annotated SV\n###################################\n# => should be the same in the VCF and in the annotated file\n\n# There are 2 paires of square-bracketed notations in ALT:\n# \n# # First SV:\n# 1       67452229        166_1   N       [1:67452635[N   353.30  .       SVTYPE=BND;STRANDS=--:33;CIPOS=-2,0;CIEND=-10,9;CIPOS95=0,0;CIEND95=0,0;MATEID=166_2;EVENT=166;SU=33;PE=17;SR=16        GT:SU:PE:SR:GQ:\n# SQ:GL:DP:RO:AO:QR:QA:RS:AS:ASC:RP:AP:AB 1/1:9:5:4:87:0.00:-11,-20,-82:102:93:8:92:7:51:3:0:41:4:0.071   0/1:24:12:12:200:353.30:-44,-9,-59:105:81:23:80:22:41:11:0:39:11:0.22\n# 1       67452635        166_2   N       [1:67452229[N   353.30  .       SVTYPE=BND;STRANDS=--:33;CIPOS=-10,9;CIEND=-2,0;CIPOS95=0,0;CIEND95=0,0;MATEID=166_1;EVENT=166;SECONDARY;SU=33;PE=17;SR=16      GT:SU:P\n# E:SR:GQ:SQ:GL:DP:RO:AO:QR:QA:RS:AS:ASC:RP:AP:AB 0/0:9:5:4:87:0.00:-11,-20,-82:102:93:8:92:7:51:3:0:41:4:0.071   0/1:24:12:12:200:353.30:-44,-9,-59:105:81:23:80:22:41:11:0:39:11:0.22\n# \n# # Second SV:\n# 1       186826187       370_1   N       N]1:186826404]  98.88   .       SVTYPE=BND;STRANDS=++:8;CIPOS=-10,9;CIEND=-10,9;CIPOS95=0,0;CIEND95=0,0;MATEID=370_2;EVENT=370;SU=8;PE=0;SR=8   GT:SU:PE:SR:GQ:SQ:GL:DP\n# :RO:AO:QR:QA:RS:AS:ASC:RP:AP:AB 0/0:3:0:3:48:0.00:-5,-10,-39:47:43:3:43:3:43:3:0:0:0:0.065      0/1:5:0:5:71:98.88:-11,-1,-8:18:12:5:12:5:12:5:0:0:0:0.29\n# 1       186826404       370_2   N       N]1:186826187]  98.88   .       SVTYPE=BND;STRANDS=++:8;CIPOS=-10,9;CIEND=-10,9;CIPOS95=0,0;CIEND95=0,0;MATEID=370_1;EVENT=370;SECONDARY;SU=8;PE=0;SR=8 GT:SU:PE:SR:GQ:\n# SQ:GL:DP:RO:AO:QR:QA:RS:AS:ASC:RP:AP:AB 0/0:3:0:3:48:0.00:-5,-10,-39:47:43:3:43:3:43:3:0:0:0:0.065      0/1:5:0:5:71:98.88:-11,-1,-8:18:12:5:12:5:12:5:0:0:0:0.29\n\n\n\n\nmkdir -p ./output\nrm -f \"./output/test1_tcl.annotated.tsv\"\n$ANNOTSV/bin/AnnotSV -SVinputFile \"./input/test1.vcf\" -SVinputInfo 0 -outputFile \"./output/test1_tcl.annotated.tsv\" -genomeBuild GRCh37\n\n\n# Check that no column is shifted\nfor v in `$cut \"./output/test1_tcl.annotated.tsv\" \"ACMG_class\" | sort -u`\ndo\n        if ! exists_in_list \"1 2 3 4 5 ACMG_class full=1 full=2 full=3 full=4 full=5 full=NA NA\" \" \" \"$v\"\n        then\n                echo \"error1: Error with Lumpy VCF input file\"\n                exit 1\n        fi\ndone\n\n\n# Check the number of annotated SV\nnVCF=`grep -v \"^#\" \"./input/test1.vcf\" | wc -l`\n\nnTSV=`$cut .\"/output/test1_tcl.annotated.tsv\" \"Annotation_mode\" | grep -c \"full\"`\nnUnnanotatedTSV=`wc -l \"./output/test1_tcl.unannotated.tsv\" | cut -d\" \" -f 1`\nnTSV=`echo $(($nTSV + $nUnnanotatedTSV))`\n\nif [ \"$nVCF\" != \"$nTSV\" ]\nthen\n        echo \"error 1: not the expected number of annotated SV\"\n        exit 1\nelse\n\techo \"ok - Finished\"\nfi\n\n"
  },
  {
    "path": "tests/AnnotSV/test_06_VCFfromLumpy/input/test.DEL.DUP.vcf",
    "content": "##fileformat=VCFv4.2\r\n##source=LUMPY\r\n##INFO=<ID=SVTYPE,Number=1,Type=String,Description=\"Type of structural variant\">\r\n##INFO=<ID=SVLEN,Number=.,Type=Integer,Description=\"Difference in length between REF and ALT alleles\">\r\n##INFO=<ID=END,Number=1,Type=Integer,Description=\"End position of the variant described in this record\">\r\n##INFO=<ID=STRANDS,Number=.,Type=String,Description=\"Strand orientation of the adjacency in BEDPE format (DEL:+-, DUP:-+, INV:++/--)\">\r\n##INFO=<ID=IMPRECISE,Number=0,Type=Flag,Description=\"Imprecise structural variation\">\r\n##INFO=<ID=CIPOS,Number=2,Type=Integer,Description=\"Confidence interval around POS for imprecise variants\">\r\n##INFO=<ID=CIEND,Number=2,Type=Integer,Description=\"Confidence interval around END for imprecise variants\">\r\n##INFO=<ID=CIPOS95,Number=2,Type=Integer,Description=\"Confidence interval (95%) around POS for imprecise variants\">\r\n##INFO=<ID=CIEND95,Number=2,Type=Integer,Description=\"Confidence interval (95%) around END for imprecise variants\">\r\n##INFO=<ID=MATEID,Number=.,Type=String,Description=\"ID of mate breakends\">\r\n##INFO=<ID=EVENT,Number=1,Type=String,Description=\"ID of event associated to breakend\">\r\n##INFO=<ID=SECONDARY,Number=0,Type=Flag,Description=\"Secondary breakend in a multi-line variants\">\r\n##INFO=<ID=SU,Number=.,Type=Integer,Description=\"Number of pieces of evidence supporting the variant across all samples\">\r\n##INFO=<ID=PE,Number=.,Type=Integer,Description=\"Number of paired-end reads supporting the variant across all samples\">\r\n##INFO=<ID=SR,Number=.,Type=Integer,Description=\"Number of split reads supporting the variant across all samples\">\r\n##INFO=<ID=BD,Number=.,Type=Integer,Description=\"Amount of BED evidence supporting the variant across all samples\">\r\n##INFO=<ID=EV,Number=.,Type=String,Description=\"Type of LUMPY evidence contributing to the variant call\">\r\n##INFO=<ID=PRPOS,Number=.,Type=String,Description=\"LUMPY probability curve of the POS breakend\">\r\n##INFO=<ID=PREND,Number=.,Type=String,Description=\"LUMPY probability curve of the END breakend\">\r\n##ALT=<ID=DEL,Description=\"Deletion\">\r\n##ALT=<ID=DUP,Description=\"Duplication\">\r\n##ALT=<ID=INV,Description=\"Inversion\">\r\n##ALT=<ID=DUP:TANDEM,Description=\"Tandem duplication\">\r\n##ALT=<ID=INS,Description=\"Insertion of novel sequence\">\r\n##ALT=<ID=CNV,Description=\"Copy number variable region\">\r\n##FORMAT=<ID=GT,Number=1,Type=String,Description=\"Genotype\">\r\n##FORMAT=<ID=SU,Number=1,Type=Integer,Description=\"Number of pieces of evidence supporting the variant\">\r\n##FORMAT=<ID=PE,Number=1,Type=Integer,Description=\"Number of paired-end reads supporting the variant\">\r\n##FORMAT=<ID=SR,Number=1,Type=Integer,Description=\"Number of split reads supporting the variant\">\r\n##FORMAT=<ID=BD,Number=1,Type=Integer,Description=\"Amount of BED evidence supporting the variant\">\r\n#CHROM\tPOS\tID\tREF\tALT\tQUAL\tFILTER\tINFO\tFORMAT\tsample1\tsample2\r\n##INFO=<ID=STRANDS,Number=.,Type=String,Description=\"Strand orientation of the adjacency in BEDPE format (DEL:+-, DUP:-+, INV:++/--)\">\r\n##ALT=<ID=DEL,Description=\"Deletion\">\r\n##ALT=<ID=DUP,Description=\"Duplication\">\r\n##ALT=<ID=DUP:TANDEM,Description=\"Tandem duplication\">\r\n1\t118091051\t275\tN\t<DEL>\t311.66\t.\tSVTYPE=DEL;SVLEN=-207;END=118091258;STRANDS=+-:13;CIPOS=-10,9;CIEND=-10,9;CIPOS95=0,0;CIEND95=0,0;SU=13;PE=0;SR=13\tGT:SU:PE:SR:GQ:SQ:GL:DP:RO:AO:QR:QA:RS:AS:ASC:RP:AP:AB\t1/0:4:0:4:33:0.00:-10,-13,-57:74:66:7:65:6:37:3:1:28:1:0.085\t0/0:9:0:9:178:311.66:-33,-2,-20:49:32:16:31:15:11:8:1:20:5:0.33\r\n1\t182884306\t367\tN\t<DEL>\t149.85\t.\tSVTYPE=DEL;SVLEN=-14;END=182884320;STRANDS=+-:7;CIPOS=-5,4;CIEND=-5,4;CIPOS95=0,0;CIEND95=0,0;SU=7;PE=0;SR=7\tGT:SU:PE:SR:GQ:SQ:GL:DP:RO:AO:QR:QA:RS:AS:ASC:RP:AP:AB\t0/0:6:0:6:45:0.00:-0,-5,-15:15:15:0:15:0:15:0:0:0:0:0\t0/1:1:0:1:72:149.85:-16,-1,-8:21:13:7:13:7:13:0:6:0:0:0.35\r\n2\t27313898\t606\tN\t<DUP>\t59.61\t.\tSVTYPE=DUP;SVLEN=-127;END=27314025;STRANDS=+-:6;CIPOS=-6,5;CIEND=-6,5;CIPOS95=0,0;CIEND95=0,0;SU=6;PE=0;SR=6\tGT:SU:PE:SR:GQ:SQ:GL:DP:RO:AO:QR:QA:RS:AS:ASC:RP:AP:AB\t0/0:2:0:2:117:0.00:-4,-16,-61:70:66:3:66:3:66:1:1:0:0:0.043\t0/1:4:0:4:59:59.61:-15,-9,-43:61:52:8:52:8:52:6:2:0:0:0.13\r\n2\t35576937\t649\tN\t<DEL>\t68.88\t.\tSVTYPE=DEL;SVLEN=-27;END=35576964;STRANDS=+-:8;CIPOS=-10,9;CIEND=-9,9;CIPOS95=0,0;CIEND95=0,0;SU=8;PE=0;SR=8\tGT:SU:PE:SR:GQ:SQ:GL:DP:RO:AO:QR:QA:RS:AS:ASC:RP:AP:AB\t0/0:5:0:5:78:0.00:-0,-8,-26:26:26:0:26:0:26:0:0:0:0:0\t0/1:3:0:3:68:68.88:-9,-2,-10:18:13:4:13:4:13:0:3:0:0:0.24\r\n2\t88429841\t756\tN\t<DEL>\t296.20\t.\tSVTYPE=DEL;SVLEN=-311;END=88430152;STRANDS=+-:15;CIPOS=-10,9;CIEND=-10,9;CIPOS95=0,0;CIEND95=0,0;SU=15;PE=0;SR=15\tGT:SU:PE:SR:GQ:SQ:GL:DP:RO:AO:QR:QA:RS:AS:ASC:RP:AP:AB\t0/0:6:0:6:0:2.70:-17,-17,-77:103:91:11:90:10:46:7:1:44:2:0.1\t0/1:9:0:9:200:293.50:-35,-6,-40:75:56:18:55:17:24:9:3:31:4:0.24\r\n2\t129550225\t855\tN\t<DEL>\t4.68\t.\tSVTYPE=DEL;SVLEN=-28;END=129550253;STRANDS=+-:6;CIPOS=-6,5;CIEND=-6,5;CIPOS95=0,0;CIEND95=0,0;SU=6;PE=0;SR=6\tGT:SU:PE:SR:GQ:SQ:GL:DP:RO:AO:QR:QA:RS:AS:ASC:RP:AP:AB\t0/0:4:0:4:96:0.00:-3,-13,-47:53:50:2:50:2:50:1:0:0:0:0.038\t0/1:2:0:2:2:4.68:-4,-3,-15:20:17:2:17:2:17:1:0:0:0:0.11\r\n2\t224699787\t1036\tN\t<DUP>\t53.85\t.\tSVTYPE=DUP;SVLEN=-10;END=224699797;STRANDS=+-:16;CIPOS=-2,1;CIEND=-2,1;CIPOS95=0,0;CIEND95=0,0;SU=16;PE=0;SR=16\tGT:SU:PE:SR:GQ:SQ:GL:DP:RO:AO:QR:QA:RS:AS:ASC:RP:AP:AB\t0/0:13:0:13:42:0.00:-0,-4,-14:14:14:0:14:0:14:0:0:0:0:0\t0/1:3:0:3:53:53.85:-8,-3,-14:23:18:4:18:4:18:0:3:0:0:0.18\r\n2\t236378717\t1068\tN\t<DEL>\t99.30\t.\tSVTYPE=DEL;SVLEN=-26;END=236378743;STRANDS=+-:8;CIPOS=-10,9;CIEND=-10,9;CIPOS95=0,0;CIEND95=0,0;SU=8;PE=0;SR=8\tGT:SU:PE:SR:GQ:SQ:GL:DP:RO:AO:QR:QA:RS:AS:ASC:RP:AP:AB\t0/0:6:0:6:27:0.01:-0,-3,-9:9:9:0:9:0:9:0:0:0:0:0\t0/1:2:0:2:10:99.29:-10,-1,-2:8:3:4:3:4:3:0:3:0:0:0.57\r\n2\t241726086\t1097\tN\t<DEL>\t26.62\t.\tSVTYPE=DEL;SVLEN=-33;END=241726119;STRANDS=+-:8;CIPOS=-10,9;CIEND=-1,7;CIPOS95=0,0;CIEND95=0,0;SU=8;PE=0;SR=8\tGT:SU:PE:SR:GQ:SQ:GL:DP:RO:AO:QR:QA:RS:AS:ASC:RP:AP:AB\t0/0:6:0:6:102:0.00:-15,-26,-110:135:124:10:124:10:124:5:4:0:0:0.075\t0/1:2:0:2:26:26.62:-12,-10,-46:62:54:7:54:7:54:1:5:0:0:0.11\r\n2\t242411342\t1105\tN\t<DEL>\t137.63\t.\tSVTYPE=DEL;SVLEN=-180;END=242411522;STRANDS=+-:5;CIPOS=-10,9;CIEND=-10,9;CIPOS95=0,0;CIEND95=0,0;SU=5;PE=0;SR=5\tGT:SU:PE:SR:GQ:SQ:GL:DP:RO:AO:QR:QA:RS:AS:ASC:RP:AP:AB\t0/0:1:0:1:66:0.00:-6,-13,-52:63:58:4:58:4:58:0:3:0:0:0.065\t0/1:4:0:4:137:137.63:-20,-6,-34:55:44:10:44:10:44:3:6:0:0:0.19\r\n3\t6162950\t1125\tN\t<DEL>\t260.82\t.\tSVTYPE=DEL;SVLEN=-91;END=6163041;STRANDS=+-:8;CIPOS=-10,8;CIEND=-10,9;CIPOS95=0,0;CIEND95=0,0;SU=8;PE=0;SR=8\tGT:SU:PE:SR:GQ:SQ:GL:DP:RO:AO:QR:QA:RS:AS:ASC:RP:AP:AB\t0/0:1:0:1:39:0.00:-3,-7,-28:34:31:2:31:2:31:0:1:0:0:0.061\t0/1:7:0:7:55:260.82:-27,-1,-6:24:12:11:12:11:12:6:4:0:0:0.48\r\n3\t7905948\t1132\tN\t<DEL>\t362.44\t.\tSVTYPE=DEL;SVLEN=-202;END=7906150;STRANDS=+-:9;CIPOS=-4,3;CIEND=-4,3;CIPOS95=0,0;CIEND95=0,0;SU=9;PE=0;SR=9\tGT:SU:PE:SR:GQ:SQ:GL:DP:RO:AO:QR:QA:RS:AS:ASC:RP:AP:AB\t0/0:2:0:2:114:0.00:-4,-16,-60:71:66:4:65:3:35:1:0:30:1:0.044\t0/1:7:0:7:200:362.44:-42,-5,-41:82:60:21:59:20:29:6:5:30:8:0.25\r\n3\t26450970\t1166\tN\t<DEL>\t563.52\t.\tSVTYPE=DEL;SVLEN=-1328;END=26452298;STRANDS=+-:29;CIPOS=-2,1;CIEND=-10,9;CIPOS95=0,0;CIEND95=0,0;SU=29;PE=14;SR=15\tGT:SU:PE:SR:GQ:SQ:GL:DP:RO:AO:QR:QA:RS:AS:ASC:RP:AP:AB\t0/0:4:2:2:123:0.00:-4,-17,-63:74:69:4:68:3:39:1:0:29:1:0.042\t0/1:25:12:13:194:563.52:-58,-1,-21:65:38:26:37:25:19:12:1:18:11:0.4\r\n"
  },
  {
    "path": "tests/AnnotSV/test_06_VCFfromLumpy/input/test1.csv",
    "content": "id,start_chrom,start,end_chrom,end,ref,alt,length,brackets,type_inferred\n166_1,1,67452229,1,67452635,N,[1:67452635[N,406,[N,INV\n275,1,118091051,1,118091258,N,<DEL>,207,N[,DEL\n367,1,182884306,1,182884320,N,<DEL>,14,N[,DEL\n370_1,1,186826187,1,186826404,N,N]1:186826404],217,N],INV\n606,2,27313898,2,27314025,N,<DEL>,127,N[,DEL\n649,2,35576937,2,35576964,N,<DEL>,27,N[,DEL\n756,2,88429841,2,88430152,N,<DEL>,311,N[,DEL\n855,2,129550225,2,129550253,N,<DEL>,28,N[,DEL\n1036,2,224699787,2,224699797,N,<DEL>,10,N[,DEL\n1068,2,236378717,2,236378743,N,<DEL>,26,N[,DEL\n1097,2,241726086,2,241726119,N,<DEL>,33,N[,DEL\n1105,2,242411342,2,242411522,N,<DEL>,180,N[,DEL\n1125,3,6162950,3,6163041,N,<DEL>,91,N[,DEL\n1132,3,7905948,3,7906150,N,<DEL>,202,N[,DEL\n1166,3,26450970,3,26452298,N,<DEL>,1328,N[,DEL\n"
  },
  {
    "path": "tests/AnnotSV/test_06_VCFfromLumpy/input/test1.vcf",
    "content": "##fileformat=VCFv4.2\r\n##source=LUMPY\r\n##INFO=<ID=SVTYPE,Number=1,Type=String,Description=\"Type of structural variant\">\r\n##INFO=<ID=SVLEN,Number=.,Type=Integer,Description=\"Difference in length between REF and ALT alleles\">\r\n##INFO=<ID=END,Number=1,Type=Integer,Description=\"End position of the variant described in this record\">\r\n##INFO=<ID=STRANDS,Number=.,Type=String,Description=\"Strand orientation of the adjacency in BEDPE format (DEL:+-, DUP:-+, INV:++/--)\">\r\n##INFO=<ID=IMPRECISE,Number=0,Type=Flag,Description=\"Imprecise structural variation\">\r\n##INFO=<ID=CIPOS,Number=2,Type=Integer,Description=\"Confidence interval around POS for imprecise variants\">\r\n##INFO=<ID=CIEND,Number=2,Type=Integer,Description=\"Confidence interval around END for imprecise variants\">\r\n##INFO=<ID=CIPOS95,Number=2,Type=Integer,Description=\"Confidence interval (95%) around POS for imprecise variants\">\r\n##INFO=<ID=CIEND95,Number=2,Type=Integer,Description=\"Confidence interval (95%) around END for imprecise variants\">\r\n##INFO=<ID=MATEID,Number=.,Type=String,Description=\"ID of mate breakends\">\r\n##INFO=<ID=EVENT,Number=1,Type=String,Description=\"ID of event associated to breakend\">\r\n##INFO=<ID=SECONDARY,Number=0,Type=Flag,Description=\"Secondary breakend in a multi-line variants\">\r\n##INFO=<ID=SU,Number=.,Type=Integer,Description=\"Number of pieces of evidence supporting the variant across all samples\">\r\n##INFO=<ID=PE,Number=.,Type=Integer,Description=\"Number of paired-end reads supporting the variant across all samples\">\r\n##INFO=<ID=SR,Number=.,Type=Integer,Description=\"Number of split reads supporting the variant across all samples\">\r\n##INFO=<ID=BD,Number=.,Type=Integer,Description=\"Amount of BED evidence supporting the variant across all samples\">\r\n##INFO=<ID=EV,Number=.,Type=String,Description=\"Type of LUMPY evidence contributing to the variant call\">\r\n##INFO=<ID=PRPOS,Number=.,Type=String,Description=\"LUMPY probability curve of the POS breakend\">\r\n##INFO=<ID=PREND,Number=.,Type=String,Description=\"LUMPY probability curve of the END breakend\">\r\n##ALT=<ID=DEL,Description=\"Deletion\">\r\n##ALT=<ID=DUP,Description=\"Duplication\">\r\n##ALT=<ID=INV,Description=\"Inversion\">\r\n##ALT=<ID=DUP:TANDEM,Description=\"Tandem duplication\">\r\n##ALT=<ID=INS,Description=\"Insertion of novel sequence\">\r\n##ALT=<ID=CNV,Description=\"Copy number variable region\">\r\n##FORMAT=<ID=GT,Number=1,Type=String,Description=\"Genotype\">\r\n##FORMAT=<ID=SU,Number=1,Type=Integer,Description=\"Number of pieces of evidence supporting the variant\">\r\n##FORMAT=<ID=PE,Number=1,Type=Integer,Description=\"Number of paired-end reads supporting the variant\">\r\n##FORMAT=<ID=SR,Number=1,Type=Integer,Description=\"Number of split reads supporting the variant\">\r\n##FORMAT=<ID=BD,Number=1,Type=Integer,Description=\"Amount of BED evidence supporting the variant\">\r\n#CHROM\tPOS\tID\tREF\tALT\tQUAL\tFILTER\tINFO\tFORMAT\tsample1\tsample2\r\n1\t67452229\t166_1\tN\t[1:67452635[N\t353.30\t.\tSVTYPE=BND;STRANDS=--:33;CIPOS=-2,0;CIEND=-10,9;CIPOS95=0,0;CIEND95=0,0;MATEID=166_2;EVENT=166;SU=33;PE=17;SR=16\tGT:SU:PE:SR:GQ:SQ:GL:DP:RO:AO:QR:QA:RS:AS:ASC:RP:AP:AB\t1/1:9:5:4:87:0.00:-11,-20,-82:102:93:8:92:7:51:3:0:41:4:0.071\t0/1:24:12:12:200:353.30:-44,-9,-59:105:81:23:80:22:41:11:0:39:11:0.22\r\n1\t67452635\t166_2\tN\tN]1:67452229]\t353.30\t.\tSVTYPE=BND;STRANDS=--:33;CIPOS=-10,9;CIEND=-2,0;CIPOS95=0,0;CIEND95=0,0;MATEID=166_1;EVENT=166;SECONDARY;SU=33;PE=17;SR=16\tGT:SU:PE:SR:GQ:SQ:GL:DP:RO:AO:QR:QA:RS:AS:ASC:RP:AP:AB\t0/0:9:5:4:87:0.00:-11,-20,-82:102:93:8:92:7:51:3:0:41:4:0.071\t0/1:24:12:12:200:353.30:-44,-9,-59:105:81:23:80:22:41:11:0:39:11:0.22\r\n1\t118091051\t275\tN\t<DEL>\t311.66\t.\tSVTYPE=DEL;SVLEN=-207;END=118091258;STRANDS=+-:13;CIPOS=-10,9;CIEND=-10,9;CIPOS95=0,0;CIEND95=0,0;SU=13;PE=0;SR=13\tGT:SU:PE:SR:GQ:SQ:GL:DP:RO:AO:QR:QA:RS:AS:ASC:RP:AP:AB\t1/0:4:0:4:33:0.00:-10,-13,-57:74:66:7:65:6:37:3:1:28:1:0.085\t0/0:9:0:9:178:311.66:-33,-2,-20:49:32:16:31:15:11:8:1:20:5:0.33\r\n1\t182884306\t367\tN\t<DEL>\t149.85\t.\tSVTYPE=DEL;SVLEN=-14;END=182884320;STRANDS=+-:7;CIPOS=-5,4;CIEND=-5,4;CIPOS95=0,0;CIEND95=0,0;SU=7;PE=0;SR=7\tGT:SU:PE:SR:GQ:SQ:GL:DP:RO:AO:QR:QA:RS:AS:ASC:RP:AP:AB\t0/0:6:0:6:45:0.00:-0,-5,-15:15:15:0:15:0:15:0:0:0:0:0\t0/1:1:0:1:72:149.85:-16,-1,-8:21:13:7:13:7:13:0:6:0:0:0.35\r\n1\t186826187\t370_1\tN\t[1:186826404[N\t98.88\t.\tSVTYPE=BND;STRANDS=++:8;CIPOS=-10,9;CIEND=-10,9;CIPOS95=0,0;CIEND95=0,0;MATEID=370_2;EVENT=370;SU=8;PE=0;SR=8\tGT:SU:PE:SR:GQ:SQ:GL:DP:RO:AO:QR:QA:RS:AS:ASC:RP:AP:AB\t0/0:3:0:3:48:0.00:-5,-10,-39:47:43:3:43:3:43:3:0:0:0:0.065\t0/1:5:0:5:71:98.88:-11,-1,-8:18:12:5:12:5:12:5:0:0:0:0.29\r\n1\t186826404\t370_2\tN\tN]1:186826187]\t98.88\t.\tSVTYPE=BND;STRANDS=++:8;CIPOS=-10,9;CIEND=-10,9;CIPOS95=0,0;CIEND95=0,0;MATEID=370_1;EVENT=370;SECONDARY;SU=8;PE=0;SR=8\tGT:SU:PE:SR:GQ:SQ:GL:DP:RO:AO:QR:QA:RS:AS:ASC:RP:AP:AB\t0/0:3:0:3:48:0.00:-5,-10,-39:47:43:3:43:3:43:3:0:0:0:0.065\t0/1:5:0:5:71:98.88:-11,-1,-8:18:12:5:12:5:12:5:0:0:0:0.29\r\n2\t27313898\t606\tN\t<DEL>\t59.61\t.\tSVTYPE=DEL;SVLEN=-127;END=27314025;STRANDS=+-:6;CIPOS=-6,5;CIEND=-6,5;CIPOS95=0,0;CIEND95=0,0;SU=6;PE=0;SR=6\tGT:SU:PE:SR:GQ:SQ:GL:DP:RO:AO:QR:QA:RS:AS:ASC:RP:AP:AB\t0/0:2:0:2:117:0.00:-4,-16,-61:70:66:3:66:3:66:1:1:0:0:0.043\t0/1:4:0:4:59:59.61:-15,-9,-43:61:52:8:52:8:52:6:2:0:0:0.13\r\n2\t35576937\t649\tN\t<DEL>\t68.88\t.\tSVTYPE=DEL;SVLEN=-27;END=35576964;STRANDS=+-:8;CIPOS=-10,9;CIEND=-9,9;CIPOS95=0,0;CIEND95=0,0;SU=8;PE=0;SR=8\tGT:SU:PE:SR:GQ:SQ:GL:DP:RO:AO:QR:QA:RS:AS:ASC:RP:AP:AB\t0/0:5:0:5:78:0.00:-0,-8,-26:26:26:0:26:0:26:0:0:0:0:0\t0/1:3:0:3:68:68.88:-9,-2,-10:18:13:4:13:4:13:0:3:0:0:0.24\r\n2\t88429841\t756\tN\t<DEL>\t296.20\t.\tSVTYPE=DEL;SVLEN=-311;END=88430152;STRANDS=+-:15;CIPOS=-10,9;CIEND=-10,9;CIPOS95=0,0;CIEND95=0,0;SU=15;PE=0;SR=15\tGT:SU:PE:SR:GQ:SQ:GL:DP:RO:AO:QR:QA:RS:AS:ASC:RP:AP:AB\t0/0:6:0:6:0:2.70:-17,-17,-77:103:91:11:90:10:46:7:1:44:2:0.1\t0/1:9:0:9:200:293.50:-35,-6,-40:75:56:18:55:17:24:9:3:31:4:0.24\r\n2\t129550225\t855\tN\t<DEL>\t4.68\t.\tSVTYPE=DEL;SVLEN=-28;END=129550253;STRANDS=+-:6;CIPOS=-6,5;CIEND=-6,5;CIPOS95=0,0;CIEND95=0,0;SU=6;PE=0;SR=6\tGT:SU:PE:SR:GQ:SQ:GL:DP:RO:AO:QR:QA:RS:AS:ASC:RP:AP:AB\t0/0:4:0:4:96:0.00:-3,-13,-47:53:50:2:50:2:50:1:0:0:0:0.038\t0/1:2:0:2:2:4.68:-4,-3,-15:20:17:2:17:2:17:1:0:0:0:0.11\r\n2\t224699787\t1036\tN\t<DEL>\t53.85\t.\tSVTYPE=DEL;SVLEN=-10;END=224699797;STRANDS=+-:16;CIPOS=-2,1;CIEND=-2,1;CIPOS95=0,0;CIEND95=0,0;SU=16;PE=0;SR=16\tGT:SU:PE:SR:GQ:SQ:GL:DP:RO:AO:QR:QA:RS:AS:ASC:RP:AP:AB\t0/0:13:0:13:42:0.00:-0,-4,-14:14:14:0:14:0:14:0:0:0:0:0\t0/1:3:0:3:53:53.85:-8,-3,-14:23:18:4:18:4:18:0:3:0:0:0.18\r\n2\t236378717\t1068\tN\t<DEL>\t99.30\t.\tSVTYPE=DEL;SVLEN=-26;END=236378743;STRANDS=+-:8;CIPOS=-10,9;CIEND=-10,9;CIPOS95=0,0;CIEND95=0,0;SU=8;PE=0;SR=8\tGT:SU:PE:SR:GQ:SQ:GL:DP:RO:AO:QR:QA:RS:AS:ASC:RP:AP:AB\t0/0:6:0:6:27:0.01:-0,-3,-9:9:9:0:9:0:9:0:0:0:0:0\t0/1:2:0:2:10:99.29:-10,-1,-2:8:3:4:3:4:3:0:3:0:0:0.57\r\n2\t241726086\t1097\tN\t<DEL>\t26.62\t.\tSVTYPE=DEL;SVLEN=-33;END=241726119;STRANDS=+-:8;CIPOS=-10,9;CIEND=-1,7;CIPOS95=0,0;CIEND95=0,0;SU=8;PE=0;SR=8\tGT:SU:PE:SR:GQ:SQ:GL:DP:RO:AO:QR:QA:RS:AS:ASC:RP:AP:AB\t0/0:6:0:6:102:0.00:-15,-26,-110:135:124:10:124:10:124:5:4:0:0:0.075\t0/1:2:0:2:26:26.62:-12,-10,-46:62:54:7:54:7:54:1:5:0:0:0.11\r\n2\t242411342\t1105\tN\t<DEL>\t137.63\t.\tSVTYPE=DEL;SVLEN=-180;END=242411522;STRANDS=+-:5;CIPOS=-10,9;CIEND=-10,9;CIPOS95=0,0;CIEND95=0,0;SU=5;PE=0;SR=5\tGT:SU:PE:SR:GQ:SQ:GL:DP:RO:AO:QR:QA:RS:AS:ASC:RP:AP:AB\t0/0:1:0:1:66:0.00:-6,-13,-52:63:58:4:58:4:58:0:3:0:0:0.065\t0/1:4:0:4:137:137.63:-20,-6,-34:55:44:10:44:10:44:3:6:0:0:0.19\r\n3\t6162950\t1125\tN\t<DEL>\t260.82\t.\tSVTYPE=DEL;SVLEN=-91;END=6163041;STRANDS=+-:8;CIPOS=-10,8;CIEND=-10,9;CIPOS95=0,0;CIEND95=0,0;SU=8;PE=0;SR=8\tGT:SU:PE:SR:GQ:SQ:GL:DP:RO:AO:QR:QA:RS:AS:ASC:RP:AP:AB\t0/0:1:0:1:39:0.00:-3,-7,-28:34:31:2:31:2:31:0:1:0:0:0.061\t0/1:7:0:7:55:260.82:-27,-1,-6:24:12:11:12:11:12:6:4:0:0:0.48\r\n3\t7905948\t1132\tN\t<DEL>\t362.44\t.\tSVTYPE=DEL;SVLEN=-202;END=7906150;STRANDS=+-:9;CIPOS=-4,3;CIEND=-4,3;CIPOS95=0,0;CIEND95=0,0;SU=9;PE=0;SR=9\tGT:SU:PE:SR:GQ:SQ:GL:DP:RO:AO:QR:QA:RS:AS:ASC:RP:AP:AB\t0/0:2:0:2:114:0.00:-4,-16,-60:71:66:4:65:3:35:1:0:30:1:0.044\t0/1:7:0:7:200:362.44:-42,-5,-41:82:60:21:59:20:29:6:5:30:8:0.25\r\n3\t26450970\t1166\tN\t<DEL>\t563.52\t.\tSVTYPE=DEL;SVLEN=-1328;END=26452298;STRANDS=+-:29;CIPOS=-2,1;CIEND=-10,9;CIPOS95=0,0;CIEND95=0,0;SU=29;PE=14;SR=15\tGT:SU:PE:SR:GQ:SQ:GL:DP:RO:AO:QR:QA:RS:AS:ASC:RP:AP:AB\t0/0:4:2:2:123:0.00:-4,-17,-63:74:69:4:68:3:39:1:0:29:1:0.042\t0/1:25:12:13:194:563.52:-58,-1,-21:65:38:26:37:25:19:12:1:18:11:0.4\r\n"
  },
  {
    "path": "tests/AnnotSV/test_07_RegulatoryElement/command_Tcl.sh",
    "content": "#!/bin/bash -x\n\nset -eo pipefail\n\ncut=\"$ANNOTSV/tests/AnnotSV/scripts/cutWithColumnNames.tcl\"\n\n# Case study 1:\n###############\n\n# Fœtus with retrognathia and cleft palate ( HP:0000278; HP:0000175 )\n# A 3.2 Mb deletion encompassing known pathogenic ClinGen and OMIM CNV close to SOX9:\n# GRCh37, chr17:66426540-69629770 DEL\n# - SOX9 gene not overlapped with the SV\n# - SOX9 RE overlapped with the SV\n\n\n# Case study 2:\n###############\n\n# Deletion at about 600 kB of MEF2C\n# MEF2C (NM_001131005), GRCh38, chr5:88914328-91802402\n# - MEF2C not overlapped with the SV\n# - MEF2C RE overlapped with the SV\n\n\n## Check with the SOX9 gene, Exomiser and GRCh37\n################################################\n\nmkdir -p ./output\nrm -f \"./output/delSOX9_tcl.annotated.tsv\"\n$ANNOTSV/bin/AnnotSV -SVinputFile \"./input/delSOX9.bed\" -hpo \"HP:0000278;HP:0000175\" -outputFile \"./output/delSOX9_tcl.annotated.tsv\" -svtBEDcol 4 -REreport 1 -genomeBuild GRCh37\n\n# Check that the \"SOX9 RE\" is annotated\n# SOX9 (HI=3/EX=0.9959/morbid/RE=ABC_enhancer+GH_enhancer)\nval=`$cut \"./output/delSOX9_tcl.annotated.tsv\" \"RE_gene\"`\nif [ `echo $val | egrep -c \"SOX9 \\(HI=3/EX=0.(7|8|9)\"` != 1 ]\nthen\n        echo \"error1: The SOX9 RE is not annotated!\"\n        exit 1\nfi\n\n# Check that the \"ACMG_class\" is \"3\"\nval=`$cut \"./output/delSOX9_tcl.annotated.tsv\" \"ACMG_class\"`\nif [ `echo $val | grep -c \"3\"` != 1 ]\nthen\n        echo \"error1: The ACMG_class is not set to 3\"\n        exit 1\nfi\n\n# Check if the RE report exists\nif [ ! -e \"./output/delSOX9_tcl.SV_RE_intersect.report\" ] \nthen\n\techo \"error1: The RE report (./output/delSOX9_tcl.SV_RE_intersect.report) was not created\"\n        exit 1\nfi\n\n\n## Check with the MEF2C gene, without Exomiser, candidateGenesFile and GRCh38\n#############################################################################\n\nrm -f \"./output/delMEF2C_tcl.annotated.tsv\"\n$ANNOTSV/bin/AnnotSV -SVinputFile \"./input/delMEF2C.bed\" -outputFile \"./output/delMEF2C_tcl.annotated.tsv\" -svtBEDcol 4 -REreport 1 -genomeBuild GRCh38 -candidateGenesFile \"./input/candidateGenesFile.txt\"\n\n# Check that the \"MEF2C RE\" is annotated\nval=`$cut \"./output/delMEF2C_tcl.annotated.tsv\" \"RE_gene\"`\n# ;MEF2C (HI=3/morbid/candidate/RE=EA_enhancer+GH_enhancer);\nif [ `echo $val | egrep -c \";MEF2C \\([^)]*GH_enhancer\"` != 1 ]\nthen\n        echo \"error1: The MEF2C RE is not annotated!\"\n        exit 1\nfi\n\n# Check that the \"ACMG_class\" is \"5\"\nval=`$cut ./output/delMEF2C_tcl.annotated.tsv \"ACMG_class\"`\nif [ `echo $val | grep -c \"5\"` != 1 ]\nthen\n        echo \"error1: The ACMG_class is not set to 5\"\n        exit 1\nfi\n\n# Check if the RE report exists\nif [ ! -e \"./output/delMEF2C_tcl.SV_RE_intersect.report\" ]\nthen\n        echo \"error1: The RE report (./output/delMEF2C_tcl.SV_RE_intersect.report) was not created\"\n        exit 1\nfi\n\n\necho \"ok - Finished\"\n\n\n\n\n"
  },
  {
    "path": "tests/AnnotSV/test_07_RegulatoryElement/input/candidateGenesFile.txt",
    "content": "CETN3 MEF2C\n"
  },
  {
    "path": "tests/AnnotSV/test_07_RegulatoryElement/input/delMEF2C.bed",
    "content": "5\t88914328\t91802402\tDEL\n"
  },
  {
    "path": "tests/AnnotSV/test_07_RegulatoryElement/input/delSOX9.bed",
    "content": "chr17\t68912390\t69629770\tDEL\n"
  },
  {
    "path": "tests/AnnotSV/test_08_largeSV/command_Tcl.sh",
    "content": "#!/bin/bash -x\n\nset -eo pipefail\n\n\ncut=\"$ANNOTSV/tests/AnnotSV/scripts/cutWithColumnNames.tcl\"\n\nfunction exists_in_list() {\n    LIST=$1\n    DELIMITER=$2\n    VALUE=$3\n    [[ \"$LIST\" =~ ($DELIMITER|^)$VALUE($DELIMITER|$) ]]\n}\n\n\n# Test with a large SV (105 Mb)\n###############################\n# (overlapping too many TAD boundaries => previously, caused a bug in excel display (split the line with a \"\\n\")\n# chr1:2806107-107058351\n\nmkdir -p ./output\nrm -f \"./output/test_tcl.annotated.tsv\"\n$ANNOTSV/bin/AnnotSV -SVinputFile \"./input/test.bed\" -SVinputInfo 1 -outputFile \"./output/test_tcl.annotated.tsv\" -svtBEDcol 6 -genomeBuild GRCh37\n\n\n# Check that no column is shifted\nfor v in `$cut \"./output/test_tcl.annotated.tsv\" \"ACMG_class\" | sort -u`\ndo\n        if ! exists_in_list \"1 2 3 4 5 ACMG_class full=1 full=2 full=3 full=4 full=5 full=NA NA\" \" \" \"$v\"\n        then\n                echo \"error1: Error with Large SV. Columns shifted.\"\n                exit 1\n        fi\ndone\n\n\necho \"ok - Finished\"\n\n"
  },
  {
    "path": "tests/AnnotSV/test_08_largeSV/input/test.bed",
    "content": "1\t2806107\t107058351\t104252245\tM\tDEL\t238169240\t57\t25\n"
  },
  {
    "path": "tests/AnnotSV/test_09_InsertionInAgene/command_Tcl.sh",
    "content": "#!/bin/bash -x\n\nset -eo pipefail\n\n\ncut=\"$ANNOTSV/tests/AnnotSV/scripts/cutWithColumnNames.tcl\"\n\n# Check the annotation of an insertion in the BBS1 gene:\n########################################################\n# 11      66278204        66278205        104252245       M        <INS>  M       M       M\n \n\nmkdir -p ./output\nrm -f \"./output/test_tcl.annotated.tsv\"\n$ANNOTSV/bin/AnnotSV -SVinputFile \"./input/test.bed\" -SVinputInfo 1 -outputFile \"./output/test_tcl.annotated.tsv\" -svtBEDcol 6 -genomeBuild GRCh37\n\n\nif [ `$cut \"./output/test_tcl.annotated.tsv\" \"Gene_name\" | grep -c BBS1` != 2 ]\nthen\n        echo \"error1: Insertion is not annotated in the BBS1 gene.\"\n        exit 1\nfi\n\necho \"ok - Finished\"\n\n"
  },
  {
    "path": "tests/AnnotSV/test_09_InsertionInAgene/input/test.bed",
    "content": "11\t66278204\t66278205\t104252245\tM\t <INS>\tM\tM\tM\n"
  },
  {
    "path": "tests/AnnotSV/test_10_BadVCFformat/command_Tcl.sh",
    "content": "#!/bin/bash -x\n\n# The return status of the following AnnotSV command is 2 (failed).\n# It's normal and we want to continue the script execution => not using the -e option of pipefail\nset -o pipefail\n\n\n\n# #################################\n# ## 1 - Check d'un VCF sans header\n# #################################\n# \n# The following error message should be displayed:\n# ERROR:\n# testVCFwithoutHeader.vcf: no VCF header line (prefixed with \"#CHROM\"). Check your VCF.\n# Exit with error\n# \n# \n# #################################################################\n# # 2 - Non official format for translocations in an input VCF file\n# #################################################################\n# \n# # Official VCF format\n# #####################\n# \n# For TRA, the official description in a VCF is done with BND\n# \n# \n# # Bad format example:\n# #####################\n# \n# # Calling of somatic SV with \"novobreak\" (analysing data from WGS of cancer)\n# chr8    1314        N       .       <TRA>   60      PASS    \"PRECISE;CT=5to3;CIPOS=-10,10;CIEND=-10,10;SOMATIC;SVTYPE=TRA;CHR2=chr11;END=870;SVLEN=0\"   GT      ./.\n# \n# => Translocation from chr8 (1314) to chr11 (870)\n# => Start = 1314\n# => End = 870\n#         start > end, pas sur le même chrom\n# \n# => From AnnotSV v 2.2, this non official format is correctly parsed by AnnotSV\n\n\n\n# VCF without header:\n#####################\n\nmkdir -p ./output\nrm -f \"./output/testVCFwithoutHeader_tcl.annotated.tsv\" \"./output/testVCFwithoutHeader_tcl.log\"\n$ANNOTSV/bin/AnnotSV -SVinputFile \"./input/testVCFwithoutHeader.vcf\" -SVinputInfo 1 -outputFile \"./output/testVCFwithoutHeader_tcl.annotated.tsv\" -svtBEDcol 6 -genomeBuild GRCh37 &> \"./output/testVCFwithoutHeader_tcl.log\"\n\n\nif [ `grep -c \"no VCF header line\" \"./output/testVCFwithoutHeader_tcl.log\"` != 1 ]\nthen\n        echo \"error1: Please check the error message for VCF without header.\"\n        exit 1\nfi\necho \"VCF without header is correctly checked by AnnotSV.\"\n\n\n\n# Bad TRA VCF format: \n#####################\n\nset -eo pipefail\n\n# All the SV should be annotated\nrm -f \"./output/testTRA_tcl.annotated.tsv\"\n$ANNOTSV/bin/AnnotSV -SVinputFile \"./input/testTRA.vcf\" -SVinputInfo 1 -outputFile \"./output/testTRA_tcl.annotated.tsv\" -genomeBuild GRCh37\n\nnInput=`grep -v \"^#\" \"./input/testTRA.vcf\" | wc -l`\nnOutput=`grep -v \"split\" \"./output/testTRA_tcl.annotated.tsv\" | grep -c full`\n\nif [ $nInput != $nOutput ]\nthen\n        echo \"error1: Not all SV from the input file ($nInput) are reported in the output ($nOutput).\"\n        exit 1\t\t\nfi\n\n\n# All the output lines should have the same length\nlength=`while read line\ndo  \n\techo  \"$line\" | tr \"\\t\" \"\\n\" | wc -l  \ndone < \"./output/testTRA_tcl.annotated.tsv\" | sort -u | wc -l`\n\nif [ $length != 1 ]\nthen\n\techo \"error1: The output lines are not all the same length ($length)\"\n        exit 1\nfi\n\n\n\necho \"ok - Finished\"\n\n"
  },
  {
    "path": "tests/AnnotSV/test_10_BadVCFformat/input/testTRA.vcf",
    "content": "#CHROM\tPOS\tID\tREF\tALT\tQUAL\tFILTER\tINFO\tFORMAT\ts1\ts2\ts3\ts4\ts5\ts6\ts7\ts8\ts9\ts10\ts11\ts12\ts13\ts14\ts15\ts16\ts17\ts18\ts19\ts20\ts21\ts22\ts23\ts24\ts25\ts26\ts27\ts28\ts29\ts30\t\r\nchr1\t63705386\tN\t.\t<TRA>\t51\tPASS\t\"PRECISE;CT=5to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;SVTYPE=TRA;CHR2=chrX;END=103478444;SVLEN=0\"\tGT\t./.\tE450570\tcontig1\tsize250\t3\tcov1.80\t14\t5\t12.4\t1\t42\t16\t5\t23.8\t3\t33\t14\t5\t56.4\t5\t56.4\t11\t0\t0\t0\t0\t6\t0\t7\t0\r\nchr10\t24094616\tN\t.\t<TRA>\t56\tPASS\t\"PRECISE;CT=3to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;SVTYPE=TRA;CHR2=chr22;END=29065201;SVLEN=0\"\tGT\t./.\tE413112\tcontig1\tsize568\t12\tcov3.17\t22\t7\t13\t2\t45.5\t22\t0\t0\t0\t0\t20\t0\t0\t0\t0\t21\t0\t0\t0\t0\t4\t0\t11\t0\r\nchr10\t72262149\tN\t.\t<DEL>\t60\tPASS\t\"PRECISE;CT=5to3;CIPOS=-10,10;CIEND=-10,10;SOMATIC;SVTYPE=DEL;CHR2=chr10;END=72262285;SVLEN=136\"\tGT\t./.\tE434477\tcontig1\tsize274\t4\tcov2.17\t36\t2\t60\t2\t60\t29\t0\t0\t0\t0\t26\t3\t60\t3\t60\t20\t0\t0\t0\t0\t215\t173\t208\t173\r\nchr10\t75132915\tN\t.\t<DEL>\t60\tPASS\t\"PRECISE;CT=5to3;CIPOS=-10,10;CIEND=-10,10;SOMATIC;SVTYPE=DEL;CHR2=chr10;END=75133073;SVLEN=158\"\tGT\t./.\tE55155\tcontig2\tsize441\t6\tcov2.04\t20\t4\t43.5\t4\t43.5\t14\t0\t0\t0\t0\t13\t3\t60\t3\t60\t17\t0\t0\t0\t0\t132\t148\t140\t148\r\nchr10\t129333382\tN\t.\t<TRA>\t60\tPASS\t\"PRECISE;CT=3to3;CIPOS=-10,10;CIEND=-10,10;SOMATIC;SVTYPE=TRA;CHR2=chr22;END=29065680;SVLEN=0\"\tGT\t./.\tE206132\tcontig1\tsize547\t13\tcov3.56\t30\t5\t60\t5\t60\t24\t0\t0\t0\t0\t23\t1\t60\t1\t60\t16\t0\t0\t0\t0\t7\t0\t11\t0\r\nchr11\t2115497\tN\t.\t<DUP>\t60\tPASS\t\"PRECISE;CT=3to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;SVTYPE=DUP;CHR2=chr11;END=2245835;SVLEN=-130338\"\tGT\t./.\tE393307\tcontig1\tsize699\t9\tcov1.93\t16\t4\t60\t4\t60\t37\t0\t0\t0\t0\t31\t9\t60\t9\t60\t25\t0\t0\t0\t0\t9\t0\t10\t0\r\nchr11\t47464564\tN\t.\t<DEL>\t60\tPASS\t\"PRECISE;CT=5to3;CIPOS=-10,10;CIEND=-10,10;SOMATIC;SVTYPE=DEL;CHR2=chr11;END=47501857;SVLEN=37293\"\tGT\t./.\tE87609\tcontig1\tsize457\t8\tcov2.62\t27\t8\t60\t8\t60\t33\t0\t0\t0\t0\t16\t7\t54.14285714\t7\t54.14285714\t27\t0\t0\t0\t0\t7\t0\t7\t0\r\nchr11\t57497816\tN\t.\t<INV>\t0\tPASS\t\"PRECISE;CT=3to3;CIPOS=-10,10;CIEND=-10,10;SOMATIC;SVTYPE=INV;CHR2=chr11;END=62150912;SVLEN=4653095\"\tGT\t./.\tE475348\tcontig2\tsize185\t2\tcov1.62\t18\t4\t7.5\t1\t30\t9\t0\t0\t0\t0\t7\t6\t7.666666667\t1\t46\t13\t0\t0\t0\t0\t10\t0\t8\t0\r\nchr11\t74464541\tN\t.\t<DUP>\t60\tPASS\t\"PRECISE;CT=3to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;SVTYPE=DUP;CHR2=chr11;END=74550711;SVLEN=-86170\"\tGT\t./.\tE46192\tcontig1\tsize217\t4\tcov2.76\t30\t6\t60\t6\t60\t29\t0\t0\t0\t0\t25\t6\t60\t6\t60\t21\t0\t0\t0\t0\t5\t0\t3\t0\r\nchr12\t111553901\tN\t.\t<DUP>\t60\tPASS\t\"PRECISE;CT=3to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;SVTYPE=DUP;CHR2=chr12;END=111763461;SVLEN=-209560\"\tGT\t./.\tE8342\tcontig1\tsize226\t4\tcov2.65\t19\t2\t60\t2\t60\t21\t0\t0\t0\t0\t1\t4\t60\t4\t60\t0\t0\t0\t0\t0\t4\t0\t4\t0\r\nchr13\t113994377\tN\t.\t<DEL>\t60\tPASS\t\"PRECISE;CT=3to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;SVTYPE=DEL;CHR2=chr13;END=113994728;SVLEN=-351\"\tGT\t./.\tE211497\tcontig1\tsize368\t11\tcov4.48\t29\t6\t60\t6\t60\t21\t1\t60\t1\t60\t23\t6\t47\t5\t55.8\t16\t0\t0\t0\t0\t201\t145\t183\t155\r\nchr14\t65007997\tN\t.\t<DEL>\t22\tPASS\t\"PRECISE;CT=5to3;CIPOS=-10,10;CIEND=-10,10;SOMATIC;SVTYPE=DEL;CHR2=chr14;END=65008106;SVLEN=109\"\tGT\t./.\tE226228\tcontig2\tsize624\t7\tcov1.68\t56\t2\t15\t0\t0\t18\t0\t0\t0\t0\t77\t14\t35.21428571\t11\t39.18181818\t17\t0\t0\t0\t0\t202\t168\t201\t173\r\nchr15\t67419954\tN\t.\t<DEL>\t60\tPASS\t\"PRECISE;CT=5to3;CIPOS=-10,10;CIEND=-10,10;SOMATIC;SVTYPE=DEL;CHR2=chr15;END=67464390;SVLEN=44436\"\tGT\t./.\tE103684\tcontig1\tsize928\t16\tcov2.58\t24\t8\t60\t8\t60\t24\t0\t0\t0\t0\t16\t5\t60\t5\t60\t19\t0\t0\t0\t0\t5\t0\t5\t0\r\nchr15\t67464564\tN\t.\t<DEL>\t60\tPASS\t\"PRECISE;CT=5to3;CIPOS=-10,10;CIEND=-10,10;SOMATIC;SVTYPE=DEL;CHR2=chr15;END=67760726;SVLEN=296162\"\tGT\t./.\tE103684\tcontig1\tsize928\t16\tcov2.58\t13\t4\t60\t4\t60\t22\t0\t0\t0\t0\t11\t5\t60\t5\t60\t24\t0\t0\t0\t0\t5\t0\t4\t0\r\nchr16\t2960179\tN\t.\t<DEL>\t60\tPASS\t\"PRECISE;CT=5to3;CIPOS=-10,10;CIEND=-10,10;SOMATIC;SVTYPE=DEL;CHR2=chr16;END=2960312;SVLEN=133\"\tGT\t./.\tE259134\tcontig1\tsize422\t5\tcov1.78\t23\t1\t60\t1\t60\t10\t0\t0\t0\t0\t23\t5\t51.8\t4\t60\t17\t0\t0\t0\t0\t171\t153\t169\t160\r\nchr17\t61023690\tN\t.\t<DEL>\t60\tPASS\t\"PRECISE;CT=3to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;SVTYPE=DEL;CHR2=chr17;END=61023980;SVLEN=-290\"\tGT\t./.\tE454618\tcontig1\tsize183\t4\tcov3.28\t21\t3\t60\t3\t60\t22\t0\t0\t0\t0\t14\t2\t57\t2\t57\t14\t0\t0\t0\t0\t166\t167\t179\t169\r\nchr19\t4836003\tN\t.\t<DEL>\t60\tPASS\t\"PRECISE;CT=3to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;SVTYPE=DEL;CHR2=chr19;END=4836266;SVLEN=-263\"\tGT\t./.\tE178162\tcontig1\tsize236\t5\tcov3.18\t19\t5\t59.2\t5\t59.2\t15\t0\t0\t0\t0\t14\t6\t60\t6\t60\t17\t0\t0\t0\t0\t158\t145\t151\t147\r\nchr20\t14996078\tN\t.\t<DEL>\t60\tPASS\t\"PRECISE;CT=5to3;CIPOS=-10,10;CIEND=-10,10;SOMATIC;SVTYPE=DEL;CHR2=chr20;END=15138778;SVLEN=142700\"\tGT\t./.\tE341303\tcontig3\tsize248\t7\tcov4.23\t31\t6\t60\t6\t60\t25\t0\t0\t0\t0\t25\t5\t60\t5\t60\t31\t0\t0\t0\t0\t4\t0\t4\t0\r\nchr21\t24253579\tN\t.\t<TRA>\t60\tPASS\t\"PRECISE;CT=5to3;CIPOS=-10,10;CIEND=-10,10;SOMATIC;SVTYPE=TRA;CHR2=chr4;END=57931247;SVLEN=0\"\tGT\t./.\tE69492\tcontig1\tsize749\t15\tcov3.00\t21\t4\t60\t4\t60\t34\t0\t0\t0\t0\t28\t5\t60\t5\t60\t18\t0\t0\t0\t0\t5\t0\t6\t0\r\nchr7\t112155563\tN\t.\t<DEL>\t60\tPASS\t\"PRECISE;CT=3to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;SVTYPE=DEL;CHR2=chr7;END=112155713;SVLEN=-150\"\tGT\t./.\tE437359\tcontig1\tsize707\t20\tcov4.24\t22\t14\t60\t14\t60\t30\t0\t0\t0\t0\t37\t12\t57\t11\t60\t26\t0\t0\t0\t0\t209\t193\t204\t196\r\nchr8\t13119175\tN\t.\t<DEL>\t60\tPASS\t\"PRECISE;CT=3to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;SVTYPE=DEL;CHR2=chr8;END=15348431;SVLEN=-2229256\"\tGT\t./.\tE349392\tcontig1\tsize541\t18\tcov4.99\t27\t0\t0\t0\t0\t35\t0\t0\t0\t0\t20\t14\t60\t14\t60\t21\t0\t0\t0\t0\t10\t0\t9\t0\r\nchr8\t13142009\tN\t.\t<TRA>\t60\tPASS\t\"PRECISE;CT=5to3;CIPOS=-10,10;CIEND=-10,10;SOMATIC;SVTYPE=TRA;CHR2=chr11;END=8708663;SVLEN=0\"\tGT\t./.\tE286535\tcontig1\tsize935\t9\tcov1.44\t16\t4\t60\t4\t60\t28\t0\t0\t0\t0\t21\t8\t60\t8\t60\t25\t0\t0\t0\t0\t4\t0\t6\t1\r\nchr8\t19258862\tN\t.\t<TRA>\t60\tPASS\t\"PRECISE;CT=5to3;CIPOS=-10,10;CIEND=-10,10;SOMATIC;SVTYPE=TRA;CHR2=chrX;END=30579234;SVLEN=0\"\tGT\t./.\tE475427\tcontig1\tsize602\t16\tcov3.99\t17\t15\t60\t15\t60\t25\t0\t0\t0\t0\t13\t8\t60\t8\t60\t12\t0\t0\t0\t0\t10\t0\t10\t0\r\nchr8\t19259046\tN\t.\t<TRA>\t60\tPASS\t\"PRECISE;CT=3to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;SVTYPE=TRA;CHR2=chr11;END=9299530;SVLEN=0\"\tGT\t./.\tE143883\tcontig1\tsize658\t18\tcov4.10\t27\t10\t60\t10\t60\t19\t0\t0\t0\t0\t21\t9\t60\t9\t60\t28\t0\t0\t0\t0\t7\t0\t11\t0\r\nchr8\t50704271\tN\t.\t<DEL>\t60\tPASS\t\"PRECISE;CT=5to3;CIPOS=-10,10;CIEND=-10,10;SOMATIC;SVTYPE=DEL;CHR2=chr8;END=50704386;SVLEN=115\"\tGT\t./.\tE368105\tcontig1\tsize349\t6\tcov2.58\t12\t4\t60\t4\t60\t9\t0\t0\t0\t0\t5\t3\t60\t3\t60\t10\t0\t0\t0\t0\t100\t124\t121\t126\r\nchrX\t54458403\tN\t.\t<DEL>\t60\tPASS\t\"PRECISE;CT=3to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;SVTYPE=DEL;CHR2=chrX;END=54458563;SVLEN=-160\"\tGT\t./.\tE354802\tcontig1\tsize346\t5\tcov2.16\t11\t6\t60\t6\t60\t5\t0\t0\t0\t0\t14\t5\t60\t5\t60\t7\t0\t0\t0\t0\t77\t66\t74\t54\r\nchrX\t103478444\tN\t.\t<TRA>\t30\tPASS\t\"PRECISE;CT=5to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;SVTYPE=TRA;CHR2=chr1;END=63705386;SVLEN=0\"\tGT\t./.\tE423477\tcontig2\tsize399\t8\tcov3.01\t14\t5\t56.4\t5\t56.4\t11\t0\t0\t0\t0\t14\t5\t12.4\t1\t42\t16\t5\t23.8\t3\t33\t7\t0\t6\t0\r\n"
  },
  {
    "path": "tests/AnnotSV/test_10_BadVCFformat/input/testVCFwithoutHeader.vcf",
    "content": "1\t797179\tMantaBND:16:0:1:0:0:0:0\tT\t[8:245697[T\t231\tNoPairSupport\tSVTYPE=BND;MATEID=MantaBND:16:0:1:0:0:0:1;CIPOS=0,40;HOMLEN=40;HOMSEQ=GATAGATCATTGATAGATGATAGGTAGATAGTAGATAGAT;BND_DEPTH=73;MATE_BND_DEPTH=46;CSQT=1|LINC01128|ENST00000445118|\tGT:FT:GQ:PL:PR:SR\t0/1:PASS:231:281,0,999:53,0:28,11\n"
  },
  {
    "path": "tests/AnnotSV/test_11_RamTracking/README",
    "content": "#####################################\n## RAM tracking while running AnnotSV\n#####################################\n\n# Input files:\n##############\n-rw-r--r-- 1 geoffroy lgm 1937148 Mar 20  2018 HG00096.chr1.phase3_shapeit2_mvncall_integrated_v5_extra_anno.20130502.genotypes.withoutSV.filtered.vcf\n-rw-r--r-- 1 geoffroy lgm  136400 Mar 12  2018 HG00096.wgs.mergedSV.v8.20130502.svs.genotypes.bed\n\n\n# Command line:\n###############\ncommand_Tcl.tcl >& command_Tcl.log\n=> Look at the logfile (no error message?) and report the RAM in this readme\n\n\n\n#########\n## BILAN:\n#########\n\n## AnnotSV v3.5.7 (2026/04/14)\n- 473776 ko\n\n## AnnotSV 3.5 (2025/07/17)\n- 481472 Ko\n\n## AnnotSV 3.2 (2022/12/13)\n- 283884 Ko\n\n## AnnotSV 3.1 (2021/10/26)\n- 179724 Ko\n\n## AnnotSV 3.0 (2020/12/18)\n- 152804 Ko\n\n## AnnotSV v2.5 (2020/10/12)\n- 680 Mb\n\n## AnnotSV v2.4 (2020/07/30)\n- 679 Mb\n\n## AnnotSV v2.3 (2019-12-20)\n- 679 Mb\n\n## AnnotSV v2.2 (2019/07/08)\n- 664 Mb\n\n## AnnotSV v2.1 (2019/04/05)\n- 651 Mb\n\n## AnnotSV v1.2 utilise :\n- 615 Mb en écrivant les lignes 1 par 1 dans l'output\n- 619 Mb en écrivant l'output à la fin\n\n\n"
  },
  {
    "path": "tests/AnnotSV/test_11_RamTracking/commandAnnotSV.sh",
    "content": "#!/bin/bash \n\nset -eo pipefail\n\ntouch \"running.flag\"\n\nSVinputFile=\"../test_02_HG00096/input/HG00096.wgs.mergedSV.v8.20130502.svs.genotypes.bed\"\nSNVindelInputFile=\"./input/HG00096.chr1.phase3_shapeit2_mvncall_integrated_v5_extra_anno.20130502.genotypes.withoutSV.filtered.vcf.gz\"\n\npid=$$\n$ANNOTSV/bin/AnnotSV -SVinputFile \"$SVinputFile\" -SVinputInfo 1 -snvIndelFiles \"$SNVindelInputFile\" -outputFile ./output/HG00096.SV_tcl.annotated.tsv -genomeBuild GRCh37 &> tutu.$pid.log \n\nrm -f \"running.flag\"\nrm -f tutu.$pid.log\n\n"
  },
  {
    "path": "tests/AnnotSV/test_11_RamTracking/command_Tcl.sh",
    "content": "#!/bin/bash -x\n\nset -eo pipefail\n\n\n# Run in background AnnotSV + creation of a flag (\"running.flag\") during the process\n./commandAnnotSV.sh &\n\n# RAM tracking\nrm -f ramAnnotSV-*-ram.txt\nramFile=\"ramAnnotSV-`hostname`-ram.txt\"\n\nsleep 1\npid=`ps -ef | grep AnnotSV | grep -v \"grep\" | grep \"bin/AnnotSV\" | awk '{print $2}'`\nwhile [ -e running.flag ]\ndo\n\t# \"rss\" = physical memory (Ko) allocated at the moment\n\t# The last command fails, the \"echo\" command will run anyway thanks to the \"||\"\n        ps -o rss= -p $pid >> $ramFile ||  echo \"End of the while\"\n        sleep 0.01\ndone\n\nmax=`sort -n $ramFile  | tail -1`\necho \"rss = $max Ko\"\n\n#rm -f $ramFile\n\n\necho \"ok - Finished\"\n\n"
  },
  {
    "path": "tests/AnnotSV/test_12_SpaceSeparatedBED/command_Tcl.sh",
    "content": "#!/bin/bash -x\n\nset -eo pipefail\n\n\ncut=\"$ANNOTSV/tests/AnnotSV/scripts/cutWithColumnNames.tcl\"\n\nfunction exists_in_list() {\n    LIST=$1\n    DELIMITER=$2\n    VALUE=$3\n    [[ \"$LIST\" =~ ($DELIMITER|^)$VALUE($DELIMITER|$) ]]\n}\n\n\n\n# BED = Tab Separated Values (OK) \n#     => Check that no column is shifted\n###################################################################\nmkdir -p ./output\nrm -f \"./output/test_tcl.annotated.tsv\"\n$ANNOTSV/bin/AnnotSV -SVinputFile \"./input/tab-separated.bed\" -SVinputInfo 1 -outputFile \"./output/test_tcl.annotated.tsv\" -svtBEDcol 4 -genomeBuild GRCh37 \n\nfor v in `$cut \"./output/test_tcl.annotated.tsv\" \"ACMG_class\" | sort -u`\ndo\n        if ! exists_in_list \"1 2 3 4 5 ACMG_class full=1 full=2 full=3 full=4 full=5 full=NA NA\" \" \" \"$v\"\n        then\n                echo \"Error with ./input/test.bed\"\n                echo \"error 1\"\n                exit 1\n        fi\ndone\n\n\n# BED = Space separated values (~in place of tabulations) \n#     => BUG \n# (space-separated-input.bed)\n###################################################################\n\n# $ANNOTSV/bin/AnnotSV -SVinputFile space-separated-input.bed -SVinputInfo 1 -outputFile ./space-separated-input_tcl.annotated.tsv -svtBEDcol -1 -genomeBuild GRCh37\n#\n# => plante :\n# ----------------------------------------------------------------------------------------------------------------\n# -- refGeneAnnotation --\n# bedtools intersect -sorted -a ./space-separated-input.formatted.sorted.bed -b /home/geoffroy/analysisOfSV/AnnotSV/AnnotSV_dev/share/AnnotSV/Annotations_Human/RefGene/GRCh37/refGene.sorted.bed -wa -wb > ./space-separ\n# ated-input_tcl.annotated.tsv.tmp.tmp\n# Error: unable to open file or unable to determine types for file ./space-separated-input.formatted.sorted.bed\n# Exit with error\n# ----------------------------------------------------------------------------------------------------------------\n\n\n# The above \"set -e\" option instructs bash to immediately exit if any command has a non-zero exit status.\n# So here, as the \"AnnotSV\" command fails, the \"echo\" command will run anyway thanks to the \"||\"\nrm -f \"./output/space-separated_tcl.annotated.tsv\"\nchecks=`$ANNOTSV/bin/AnnotSV -SVinputFile \"./input/space-separated.bed\" -SVinputInfo 1 -outputFile \"./output/space-separated_tcl.annotated.tsv\" -svtBEDcol 4 -genomeBuild GRCh37 || echo \"AnnotSV error\"`\n\n# grep -E \"motif1|motif2\"\nif [ `echo $checks | grep -E -c \"has non positional records, which are only valid for the groupBy tool|Please ensure that your file is TAB delimited\"` == 1 ]\nthen\n        echo \"Ok\"\nelse\n        echo \"error 1: \\\"non positional records\\\" error message NOT found\"\n        exit 1\nfi\n\nrm -f space-separated.NA.bed\n\necho \"ok - Finished\"\n\n\n"
  },
  {
    "path": "tests/AnnotSV/test_12_SpaceSeparatedBED/input/space-separated.NA.bed",
    "content": "3 595259 660365 DEL 46.6272\tNA\n3 21802965 21809296 DEL 69.597\tNA\n4 69375345 69436236 DEL 273.905\tNA\n5 172662014 172664164 DEL 79.7484\tNA\n6 32234922 32235385 DEL 93.4138\tNA\n6 32453238 32575659 DEL 239.412\tNA\n6 32592200 32599510 DEL 58.3926\tNA\n6 32611641 32620287 DEL 59.2892\tNA\n8 39221844 39341915 DEL 106.943\tNA\n9 41982829 42163261 DEL 160.41\tNA\n10 16716673 16716743 DEL 118.351\tNA\n11 18948751 18963684 DEL 54.8421\tNA\n11 34912059 34932271 DEL 76.9134\tNA\n11 55371141 55418665 DEL 580.662\tNA\n13 29958147 29966092 DEL 61.1997\tNA\n15 94908904 94911022 DEL 56.5386\tNA\n18 14181341 14281663 DEL 57.593\tNA\n18 57846945 57850423 DEL 156.604\tNA\n21 25900944 25905358 DEL 41.3106\tNA\nX 107834453 107844667 DEL 67.6054\tNA\n2 47630253 47630532 DUP 45.6116\tNA\n12 19517583 19573651 DUP 44.5041\tNA\n20 29811475 31779077 DUP 132.974\tNA\nX 2699898 3961923 DUP 352.409\tNA\nX 5462647 18582623 DUP 521.354\tNA\nX 18622108 23881793 DUP 568.576\tNA\nX 23968240 25739082 DUP 175.732\tNA\nX 29887933 31186057 DUP 229.828\tNA\nX 37812321 58488111 DUP 1027.53\tNA\nX 61685547 63412292 DUP 46.3037\tNA\nX 67283798 71684550 DUP 1016.59\tNA\nX 73034254 74101261 DUP 120.378\tNA\nX 90394104 92272788 DUP 115.422\tNA\nX 99226435 104510808 DUP 1048.03\tNA\nX 106467752 107830554 DUP 171.733\tNA\nX 107849336 113818583 DUP 992.51\tNA\nX 114488536 119551558 DUP 357.347\tNA\nX 121653838 125257614 DUP 784.169\tNA\nX 126909857 134852105 DUP 1211.31\tNA\nX 135822540 140050448 DUP 652.738\tNA\nX 148586564 149731207 DUP 277.733\tNA\nX 149838814 154854339 DUP 585.13\tNA\n1 108555222 110372199 DUP 75.4062\tNA\n8 106573578 108187890 DUP 53.3966\tNA\n17 57322954 58933809 DUP 25.0266\tNA\nX 5464341 8503632 DUP 81.9911\tNA\nX 8509301 9678574 DUP 37.2043\tNA\nX 9684952 12177644 DUP 51.1819\tNA\nX 12186486 13252408 DUP 53.2883\tNA\nX 13266530 18582623 DUP 111.02\tNA\nX 20629197 22336601 DUP 32.0408\tNA\nX 22340960 23881793 DUP 88.695\tNA\nX 23979867 25739082 DUP 27.3431\tNA\nX 29888592 31186057 DUP 34.4823\tNA\nX 37831155 44852216 DUP 149.157\tNA\nX 44879325 47522088 DUP 48.1608\tNA\nX 47605015 58488111 DUP 73.881\tNA\nX 67288207 70802621 DUP 66.0776\tNA\nX 99245141 101782767 DUP 42.1869\tNA\nX 101821792 104510808 DUP 31.1242\tNA\nX 107924114 113818583 DUP 70.943\tNA\nX 114524338 116884103 DUP 60.8436\tNA\nX 116890099 119551558 DUP 53.5103\tNA\nX 121659180 125257614 DUP 92.1906\tNA\nX 126912349 134852105 DUP 112.584\tNA\nX 135825852 140050448 DUP 85.0456\tNA\nX 148590033 149731207 DUP 25.4298\tNA\nX 149844200 154854339 DUP 109.716\tNA\n"
  },
  {
    "path": "tests/AnnotSV/test_12_SpaceSeparatedBED/input/space-separated.bed",
    "content": "#Chrom\tStart\tEnd\tSV type\tScore\r\n3 595259 660365 DEL 46.6272\r\n3 21802965 21809296 DEL 69.597\r\n4 69375345 69436236 DEL 273.905\r\n5 172662014 172664164 DEL 79.7484\r\n6 32234922 32235385 DEL 93.4138\r\n6 32453238 32575659 DEL 239.412\r\n6 32592200 32599510 DEL 58.3926\r\n6 32611641 32620287 DEL 59.2892\r\n8 39221844 39341915 DEL 106.943\r\n9 41982829 42163261 DEL 160.41\r\n10 16716673 16716743 DEL 118.351\r\n11 18948751 18963684 DEL 54.8421\r\n11 34912059 34932271 DEL 76.9134\r\n11 55371141 55418665 DEL 580.662\r\n13 29958147 29966092 DEL 61.1997\r\n15 94908904 94911022 DEL 56.5386\r\n18 14181341 14281663 DEL 57.593\r\n18 57846945 57850423 DEL 156.604\r\n21 25900944 25905358 DEL 41.3106\r\nX 107834453 107844667 DEL 67.6054\r\n2 47630253 47630532 DUP 45.6116\r\n12 19517583 19573651 DUP 44.5041\r\n20 29811475 31779077 DUP 132.974\r\nX 2699898 3961923 DUP 352.409\r\nX 5462647 18582623 DUP 521.354\r\nX 18622108 23881793 DUP 568.576\r\nX 23968240 25739082 DUP 175.732\r\nX 29887933 31186057 DUP 229.828\r\nX 37812321 58488111 DUP 1027.53\r\nX 61685547 63412292 DUP 46.3037\r\nX 67283798 71684550 DUP 1016.59\r\nX 73034254 74101261 DUP 120.378\r\nX 90394104 92272788 DUP 115.422\r\nX 99226435 104510808 DUP 1048.03\r\nX 106467752 107830554 DUP 171.733\r\nX 107849336 113818583 DUP 992.51\r\nX 114488536 119551558 DUP 357.347\r\nX 121653838 125257614 DUP 784.169\r\nX 126909857 134852105 DUP 1211.31\r\nX 135822540 140050448 DUP 652.738\r\nX 148586564 149731207 DUP 277.733\r\nX 149838814 154854339 DUP 585.13\r\n1 108555222 110372199 DUP 75.4062\r\n8 106573578 108187890 DUP 53.3966\r\n17 57322954 58933809 DUP 25.0266\r\nX 5464341 8503632 DUP 81.9911\r\nX 8509301 9678574 DUP 37.2043\r\nX 9684952 12177644 DUP 51.1819\r\nX 12186486 13252408 DUP 53.2883\r\nX 13266530 18582623 DUP 111.02\r\nX 20629197 22336601 DUP 32.0408\r\nX 22340960 23881793 DUP 88.695\r\nX 23979867 25739082 DUP 27.3431\r\nX 29888592 31186057 DUP 34.4823\r\nX 37831155 44852216 DUP 149.157\r\nX 44879325 47522088 DUP 48.1608\r\nX 47605015 58488111 DUP 73.881\r\nX 67288207 70802621 DUP 66.0776\r\nX 99245141 101782767 DUP 42.1869\r\nX 101821792 104510808 DUP 31.1242\r\nX 107924114 113818583 DUP 70.943\r\nX 114524338 116884103 DUP 60.8436\r\nX 116890099 119551558 DUP 53.5103\r\nX 121659180 125257614 DUP 92.1906\r\nX 126912349 134852105 DUP 112.584\r\nX 135825852 140050448 DUP 85.0456\r\nX 148590033 149731207 DUP 25.4298\r\nX 149844200 154854339 DUP 109.716"
  },
  {
    "path": "tests/AnnotSV/test_12_SpaceSeparatedBED/input/tab-separated.bed",
    "content": "# chrom\tStart\tEnd\tVariant_type\tBiologist_annotation\tBiologist_ranking\n4\t71552\t9371067\tDEL\t4p- syndrom\tPathogenic\n5\t723194\t777000\tDUP\t\tBenign\n7\t110276505\t110478039\tINS\t\tNA\n11\t66287088\t66288847\tDEL\tBBS1 internal frameshift\tPathogenic\n15\t34735949\t34806953\tDEL\t\tBenign\n16\t1565629\t1571297\tDUP\tIFT140 tandem duplication \tPathogenic\n"
  },
  {
    "path": "tests/AnnotSV/test_13_txFile/command_Tcl.sh",
    "content": "#!/bin/bash -x\n\nset -eo pipefail\n\ncut=\"$ANNOTSV/tests/AnnotSV/scripts/cutWithColumnNames.tcl\"\n\n\n################################\n# Check the \"-txFile\" option\n################################\n\n# INFO: Transcript annotation comes from $ANNOTSV/share/AnnotSV/Annotations_Human/Genes/GRCh37/genes.RefSeq.sorted.bed\n\n\n## Check 1: the CDK11B gene (with a BED input file)\n###################################################\n\n# grep CDK11B $ANNOTSV/share/AnnotSV/Annotations_Human/Genes/GRCh37/genes.RefSeq.sorted.bed\n# 1       1570602 1590465 -       CDK11B  NM_001291345    1571125 1588935 1570602,1571298,1571694,1572043,1572258,1572442,1572769,1573123,1573861,1575637,1576408,1577022,1577266,1577746,1580486,1586824,1588824,1590374,     1571218,1571488,1571843,1572160,1572366,1572564,1572875,1573245,1573952,1575813,1576474,1577181,1577362,1577869,1580625,1586938,1588948,1590465,\n# 1       1570602 1590465 -       CDK11B  NM_001787       1571125 1588935 1570602,1571298,1571694,1572043,1572258,1572442,1572769,1573123,1573861,1575637,1576408,1577022,1577266,1577707,1580486,1586818,1588824,1590374,     1571218,1571488,1571843,1572160,1572366,1572564,1572875,1573245,1573952,1575813,1576474,1577181,1577362,1577869,1580625,1586938,1588948,1590465,\n# 1       1570602 1590465 -       CDK11B  NM_033486       1571125 1588935 1570602,1571298,1571694,1572043,1572258,1572442,1572769,1573123,1573861,1575637,1576408,1577022,1577266,1577746,1580486,1586818,1588824,1590374,     1571218,1571488,1571843,1572160,1572366,1572564,1572875,1573245,1573952,1575813,1576474,1577181,1577362,1577869,1580625,1586938,1588948,1590465,\n# 1       1570602 1590465 -       CDK11B  NM_033487       1571125 1577348 1570602,1571298,1571694,1572043,1572258,1572442,1572769,1573123,1573861,1575637,1576408,1577022,1577266,1586817,1588824,1590374,        1571218,1571488,1571843,1572160,1572366,1572564,1572875,1573245,1573952,1575813,1576474,1577181,1577365,1586938,1588948,1590465,\n# 1       1570602 1590465 -       CDK11B  NM_033489       1571125 1588714 1570602,1571298,1571694,1572043,1572258,1572442,1572769,1573123,1573861,1575637,1576408,1577022,1577266,1577746,1580486,1586818,1588705,1588824,1590374,     1571218,1571488,1571843,1572160,1572366,1572564,1572875,1573245,1573952,1575813,1576474,1577181,1577362,1577869,1580625,1586938,1588752,1588948,1590465,\n# 1       1570602 1590465 -       CDK11B  NM_033490       1571125 1577849 1570602,1571298,1571694,1572043,1572258,1572442,1572769,1573123,1573861,1575637,1576408,1577022,1577266,1577746,1586817,1588824,1590374,    1571218,1571488,1571843,1572160,1572366,1572564,1572875,1573245,1573952,1575813,1576474,1577181,1577362,1577871,1586938,1588948,1590465,\n\n# By default, the CDK11B gene is annotated with the \"NM_001787\" transcript (and not the \"NM_033486\")\nmkdir -p ./output\nrm -f \"./output/test.check1_tcl.annotated.tsv\"\n$ANNOTSV/bin/AnnotSV -SVinputFile \"./input/test.check1.bed\" -outputFile \"./output/test.check1_tcl.annotated.tsv\" -svtBEDcol 5 -genomeBuild GRCh37\nannotations=`$cut \"./output/test.check1_tcl.annotated.tsv\" \"Gene_name;Tx\" | grep \"CDK11B\"`\nif [ `echo $annotations | grep -c \"NM_001787\"` != 0 ]\nthen\n        echo \"Ok\"\nelse\n        echo \"error 1: the CDK11B gene is not annotated with the NM_001787 transcript\"\n        exit 1\nfi\n\n\n# Changing of the transcript default:\n# => \"NM_033486\" transcript is given in the \"txFile.check1.txt\" file\nrm -f \"./output/test.check1.WithTx_tcl.annotated.tsv\"\n$ANNOTSV/bin/AnnotSV -SVinputFile \"./input/test.check1.bed\" -outputFile \"./output/test.check1.WithTx_tcl.annotated.tsv\" -svtBEDcol 5 -txFile \"./input/txFile.check1.txt\" -genomeBuild GRCh37\nannotations=`$cut \"./output/test.check1.WithTx_tcl.annotated.tsv\" \"Gene_name;Tx\" | grep \"CDK11B\"`\n#=> Now, the CDK11B gene is annotated with \"NM_033486\"\nif [ `echo $annotations | grep -c \"NM_033486\"` != 0 ]\nthen\n        echo \"Ok\"\nelse\n        echo \"error 1: the CDK11B gene is not annotated with the NM_033486 transcript\"\n        exit 1\nfi\n\n\n## Check 2: the NAV1 gene (with a VCF input file)\n#################################################\n\n# grep NAV1 $ANNOTSV/share/AnnotSV/Annotations_Human/Genes/GRCh37/genes.RefSeq.sorted.bed\n# 1       201508254       201796097       +       NAV1    NM_001389615    201592012       201789060       201508254,201557666,201591980,201598531,201617761,201681944,201687517,201749548,201750139,201751303,201752533,201754437,201755556,201758867,201759816,201762919,201763593,201772720,201777080,201777545,201777830,201778291,201778569,201779073,201779650,201780730,201781030,201781592,201782267,201786215,201788964,       201508470,201557777,201592734,201598635,201618553,201682047,201687883,201749687,201750437,201751997,201752980,201754479,201755705,201758920,201759894,201763003,201763705,201772842,201777277,201777738,201777999,201778389,201778665,201779233,201779886,201780885,201781102,201781789,201782386,201786413,201796097,\n# 1       201508254       201796097       +       NAV1    NM_001389616    201592012       201789060       201508254,201591980,201598531,201617761,201681944,201687517,201749548,201750139,201751303,201752533,201754437,201755556,201758867,201759681,201759816,201762919,201763593,201772720,201773616,201777080,201777545,201777830,201778291,201778569,201779073,201779650,201780730,201781030,201781592,201782267,201786215,201788964, 201508470,201592734,201598635,201618553,201682047,201687883,201749687,201750437,201751997,201752980,201754479,201755705,201758920,201759705,201759894,201763003,201763705,201772842,201773625,201777277,201777738,201777999,201778389,201778665,201779233,201779886,201780885,201781102,201781789,201782386,201786413,201796097,\n# 1       201508254       201796097       +       NAV1    NM_001389617    201592012       201789060       201508254,201557666,201591980,201598531,201617761,201681944,201687517,201749548,201750139,201751303,201752533,201754437,201755556,201757595,201758867,201759681,201759816,201762919,201763593,201772720,201773616,201777080,201777545,201777830,201778291,201778569,201779073,201779650,201780730,201781030,201781592,201782267,201786215,201788964,      201508470,201557777,201592734,201598635,201618553,201682047,201687883,201749687,201750437,201751997,201752980,201754479,201755705,201757766,201758920,201759705,201759894,201763003,201763705,201772842,201773625,201777277,201777738,201777999,201778389,201778665,201779233,201779886,201780885,201781102,201781789,201782386,201786413,201796097,\n# 1       201617793       201796097       +       NAV1    NM_020443       201617796       201789060       201617793,201681944,201687517,201749548,201750139,201751303,201752533,201754437,201755556,201757595,201758867,201759681,201759816,201762919,201763593,201772720,201773616,201777080,201777545,201777830,201778291,201778569,201779073,201779650,201780730,201781030,201781592,201782267,201786215,201788964, 201618553,201682047,201687883,201749687,201750437,201751997,201752980,201754479,201755705,201757766,201758920,201759705,201759894,201763003,201763705,201772842,201773625,201777277,201777738,201777999,201778389,201778665,201779233,201779886,201780885,201781102,201781789,201782386,201786413,201796097,\n# 1       201709027       201796097       +       NAV1    NM_001167738    201709151       201789060       201709027,201749548,201750139,201751303,201752533,201754437,201755556,201757595,201758867,201759681,201759816,201762919,201763593,201772720,201777080,201777545,201777830,201778291,201778569,201779073,201779650,201780730,201781030,201781592,201782267,201786215,201788964,       201709204,201749687,201750437,201751997,201752980,201754479,201755705,201757766,201758920,201759705,201759894,201763003,201763705,201772842,201777277,201777738,201777999,201778389,201778665,201779233,201779886,201780885,201781102,201781789,201782386,201786413,201796097,\n# 1       201709027       201796097       +       NAV1    NM_001389611    201709151       201789060       201709027,201749548,201750139,201751303,201752533,201754437,201755556,201757595,201758867,201759681,201759816,201762919,201763593,201772720,201773616,201777080,201777545,201777830,201778291,201778569,201779073,201779650,201780730,201781030,201781592,201782267,201786215,201788964,     201709204,201749687,201750437,201751997,201752980,201754479,201755705,201757766,201758920,201759705,201759894,201763003,201763705,201772842,201773625,201777277,201777738,201777999,201778389,201778665,201779233,201779886,201780885,201781102,201781789,201782386,201786413,201796097,\n# 1       201709027       201796097       +       NAV1    NM_001389612    201709151       201789060       201709027,201749548,201750139,201751303,201752533,201754437,201755556,201757595,201758867,201759816,201762919,201763593,201772720,201777080,201777545,201777830,201778291,201778569,201779073,201779650,201780730,201781030,201781592,201782267,201786215,201788964, 201709204,201749687,201750437,201751997,201752980,201754479,201755705,201757766,201758920,201759894,201763003,201763705,201772842,201777277,201777738,201777999,201778389,201778665,201779233,201779886,201780885,201781102,201781789,201782386,201786413,201796097,\n# 1       201709027       201796097       +       NAV1    NM_001389613    201709151       201789060       201709027,201749548,201750139,201751303,201752533,201754437,201755556,201758867,201759681,201759816,201762919,201763593,201772720,201773616,201777080,201777545,201777830,201778291,201778569,201779073,201779650,201780730,201781030,201781592,201782267,201786215,201788964,       201709204,201749687,201750437,201751997,201752980,201754479,201755705,201758920,201759705,201759894,201763003,201763705,201772842,201773625,201777277,201777738,201777999,201778389,201778665,201779233,201779886,201780885,201781102,201781789,201782386,201786413,201796097,\n# 1       201709027       201796097       +       NAV1    NM_001389614    201709151       201789060       201709027,201749548,201750139,201751303,201752533,201754437,201755556,201758867,201759816,201762919,201763593,201772720,201777080,201777545,201777830,201778291,201778569,201779073,201779650,201780730,201781030,201781592,201782267,201786215,201788964,   201709204,201749687,201750437,201751997,201752980,201754479,201755705,201758920,201759894,201763003,201763705,201772842,201777277,201777738,201777999,201778389,201778665,201779233,201779886,201780885,201781102,201781789,201782386,201786413,201796097,\n\n# By default, the NAV1 gene is annotated with the \"NM_001389615\" transcript (and not the \"NM_001167738\")\nrm -f \"./output/test.check2_tcl.annotated.tsv\"\n$ANNOTSV/bin/AnnotSV -SVinputFile \"./input/test.check2.vcf\" -outputFile \"./output/test.check2_tcl.annotated.tsv\" -genomeBuild GRCh37\nannotations=`$cut \"./output/test.check2_tcl.annotated.tsv\" \"Gene_name;Tx\" | grep \"NAV1\"`\nif [ `echo $annotations | grep -c \"NM_001389615\"` != 0 ]\nthen\n        echo \"Ok\"\nelse\n        echo \"error 1: the NAV1 gene is not annotated with the NM_001389615 transcript\"\n        exit 1\nfi\n\n\n# Changing of the transcript default:\n# => \"NM_001167738\" transcript is given in the \"txfile.check2.txt\" file\nrm -f \"./output/test.check2.WithTx_tcl.annotated.tsv\"\n$ANNOTSV/bin/AnnotSV -SVinputFile \"./input/test.check2.vcf\" -outputFile \"./output/test.check2.WithTx_tcl.annotated.tsv\" -txFile \"./input/txFile.check2.txt\" -genomeBuild GRCh37\nannotations=`$cut \"./output/test.check2.WithTx_tcl.annotated.tsv\" \"Gene_name;Tx\" | grep \"NAV1\"`\n#=> Now, the NAV1 gene is annotated with \"NM_001167738\"\nif [ `echo $annotations | grep -c \"NM_001167738\"` != 0 ]\nthen\n        echo \"Ok\"\nelse\n        echo \"error 1: the NAV1 gene is not annotated with the NM_001167738 transcript\"\n        exit 1\nfi\n\n\n\n############################\n# Check the \"-tx\" option\n############################\n\n## Check 3\n##########\n\n# By default, tx=\"RefSeq\"\n# Check with tx=\"ENSEMBL\"\nrm -f \"./output/test.check3_tcl.annotated.tsv\"\n$ANNOTSV/bin/AnnotSV -SVinputFile \"./input/test.check1.bed\" -outputFile \"./output/test.check3_tcl.annotated.tsv\" -svtBEDcol 5 -tx \"ENSEMBL\" -genomeBuild GRCh37\nannotations=`$cut \"./output/test.check3_tcl.annotated.tsv\" \"Gene_name;Tx\" | grep \"CDK11B\"`\nif [ `echo $annotations | grep -c \"ENST00000407249\"` != 0 ]\nthen\n        echo \"Ok\"\nelse\n        echo \"error 1: the CDK11B gene is not annotated with the ENST00000407249 transcript\"\n        exit 1\nfi\n\n\n# Changing of the transcript default:\n# => \"ENST00000341832\" transcript is given in the \"txfile.check3.txt\" file\nrm -f \"./output/test.check3.WithTx_tcl.annotated.tsv\"\n$ANNOTSV/bin/AnnotSV -SVinputFile \"./input/test.check1.bed\" -outputFile \"./output/test.check3.WithTx_tcl.annotated.tsv\" -txFile \"./input/txFile.check3.txt\" -svtBEDcol 5 -tx \"ENSEMBL\" -genomeBuild GRCh37\nannotations=`$cut \"./output/test.check3.WithTx_tcl.annotated.tsv\" \"Gene_name;Tx\" | grep \"CDK11B\"`\n#=> Now, the CDK11B gene is annotated with \"ENST00000341832\"\nif [ `echo $annotations | grep -c \"ENST00000341832\"` != 0 ]\nthen\n        echo \"Ok\"\nelse\n        echo \"error 1: the CDK11B gene is not annotated with the ENST00000341832 transcript\"\n        exit 1\nfi\n\n\n\n\necho \"ok - Finished\"\n\n\n\n\n\n\n\n"
  },
  {
    "path": "tests/AnnotSV/test_13_txFile/input/test.check1.bed",
    "content": "#chrom\tstart\tend\tscore\tSV type\n1\t1490001\t1530001\t0222\tDUP\n1\t1570602\t1585465\tDEL\n1\t94190001\t95198431\t0.001\tDUP\n"
  },
  {
    "path": "tests/AnnotSV/test_13_txFile/input/test.check2.vcf",
    "content": "##fileformat=VCFv4.2\n##ALT=<ID=INV,Description=\"Inversion\">\n##FILTER=<ID=ASSEMBLY_ONLY,Description=\"Variant is supported only by assembly evidence.\">\n##FILTER=<ID=ASSEMBLY_TOO_FEW_READ,Description=\"Not enough reads contribute to this assembly as specified by 'assembly.minReads'\">\n##FILTER=<ID=ASSEMBLY_TOO_SHORT,Description=\"This assembly is shorter than a read length\">\n##FILTER=<ID=INSUFFICIENT_SUPPORT,Description=\"Does not reach the required threshold quality for calling as specified by 'variantcalling.minScore'\">\n##FILTER=<ID=LOW_QUAL,Description=\"Low quality call as specified by 'variantcalling.lowQuality'\">\n##FILTER=<ID=NO_ASSEMBLY,Description=\"No assembly supporting this variant could be found.\">\n##FILTER=<ID=REF,Description=\"Breakpoint corresponds to reference allele\">\n##FILTER=<ID=SINGLE_ASSEMBLY,Description=\"Only one side of the breakpoint could be assembled.\">\n##FILTER=<ID=SINGLE_SUPPORT,Description=\"Supported by fewer than 'variantcalling.minReads' fragments\">\n##FILTER=<ID=SMALL_EVENT,Description=\"Event size is smaller than the minimum reportable size specified by 'variantcalling.minSize'\">\n##FORMAT=<ID=ASQ,Number=1,Type=Float,Description=\"Pro-rata quality score contribution of assemblies supporting breakpoint\">\n##FORMAT=<ID=ASRP,Number=1,Type=Integer,Description=\"Count of read pairs incorporated into any breakpoint assembly\">\n##FORMAT=<ID=ASSR,Number=1,Type=Integer,Description=\"Count of split, soft clipped or indel-containing reads incorporated into any breakpoint assemblies\">\n##FORMAT=<ID=BANRP,Number=1,Type=Integer,Description=\"Count of read pairs at this breakend assembled into a contig that does not support the breakpoint.\">\n##FORMAT=<ID=BANRPQ,Number=1,Type=Float,Description=\"Quality score of read pairs at this breakend assembled into a contig that does not support the breakpoint.\">\n##FORMAT=<ID=BANSR,Number=1,Type=Integer,Description=\"Count of split reads at this breakend assembled into a contig that does not support the breakpoint.\">\n##FORMAT=<ID=BANSRQ,Number=1,Type=Float,Description=\"Quality score of split reads at this breakend assembled into a contig that does not support the breakpoint.\">\n##FORMAT=<ID=BAQ,Number=1,Type=Float,Description=\"Pro-rata quality score contribution of assemblies supporting just local breakend\">\n##FORMAT=<ID=BASRP,Number=1,Type=Integer,Description=\"Count of read pairs incorporated into any breakend assembly\">\n##FORMAT=<ID=BASSR,Number=1,Type=Integer,Description=\"Count of split, soft clipped or indel-containing reads incorporated into any breakend assemblies\">\n##FORMAT=<ID=BQ,Number=1,Type=Float,Description=\"Quality score of breakend evidence after evidence reallocation\">\n##FORMAT=<ID=BSC,Number=1,Type=Integer,Description=\"Count of soft clips supporting just local breakend per category\">\n##FORMAT=<ID=BSCQ,Number=1,Type=Float,Description=\"Quality score of soft clips supporting just local breakend per category\">\n##FORMAT=<ID=BUM,Number=1,Type=Integer,Description=\"Count of read pairs (with one read unmapped) supporting just local breakend per category\">\n##FORMAT=<ID=BUMQ,Number=1,Type=Float,Description=\"Quality score of read pairs (with one read unmapped) supporting just local breakend per category\">\n##FORMAT=<ID=BVF,Number=1,Type=Integer,Description=\"Count of fragments providing breakend for the variant allele.\">\n##FORMAT=<ID=CASQ,Number=1,Type=Float,Description=\"Pro-rata quality score of complex compound breakpoint assemblies supporting breakpoint from elsewhere\">\n##FORMAT=<ID=GT,Number=1,Type=String,Description=\"Genotype\">\n##FORMAT=<ID=IC,Number=1,Type=Integer,Description=\"Count of read indels supporting breakpoint per category\">\n##FORMAT=<ID=IQ,Number=1,Type=Float,Description=\"Quality score of read indels supporting breakpoint per category\">\n##FORMAT=<ID=QUAL,Number=1,Type=Float,Description=\"Quality score of breakend evidence after evidence reallocation\">\n##FORMAT=<ID=RASQ,Number=1,Type=Float,Description=\"Pro-rata quality score contribution of assemblies supporting breakpoint from remote breakend\">\n##FORMAT=<ID=REF,Number=1,Type=Integer,Description=\"Count of reads mapping across this breakend\">\n##FORMAT=<ID=REFPAIR,Number=1,Type=Integer,Description=\"Count of reference read pairs spanning this breakpoint supporting the reference allele\">\n##FORMAT=<ID=RF,Number=1,Type=Integer,Description=\"Reference fragments. Count of fragments supporting the reference allele and not the variant allele.\">\n##FORMAT=<ID=RP,Number=1,Type=Integer,Description=\"Count of read pairs supporting breakpoint per category\">\n##FORMAT=<ID=RPQ,Number=1,Type=Float,Description=\"Quality score of read pairs supporting breakpoint per category\">\n##FORMAT=<ID=SR,Number=1,Type=Integer,Description=\"Count of split reads supporting breakpoint per category\">\n##FORMAT=<ID=SRQ,Number=1,Type=Float,Description=\"Quality score of split reads supporting breakpoint per category\">\n##FORMAT=<ID=VF,Number=1,Type=Integer,Description=\"Count of fragments suspporting the variant breakpoint allele and not the reference allele.\">\n##INFO=<ID=AS,Number=1,Type=Integer,Description=\"Count of assemblies supporting breakpoint\">\n##INFO=<ID=ASQ,Number=1,Type=Float,Description=\"Quality score of assemblies supporting breakpoint\">\n##INFO=<ID=ASRP,Number=1,Type=Integer,Description=\"Count of read pairs incorporated into any breakpoint assembly\">\n##INFO=<ID=ASSR,Number=1,Type=Integer,Description=\"Count of split, soft clipped or indel-containing reads incorporated into any breakpoint assemblies\">\n##INFO=<ID=BA,Number=1,Type=Integer,Description=\"Count of assemblies supporting just local breakend\">\n##INFO=<ID=BANRP,Number=1,Type=Integer,Description=\"Count of read pairs at this breakend assembled into a contig that does not support the breakpoint.\">\n##INFO=<ID=BANRPQ,Number=1,Type=Float,Description=\"Quality score of read pairs at this breakend assembled into a contig that does not support the breakpoint.\">\n##INFO=<ID=BANSR,Number=1,Type=Integer,Description=\"Count of split reads at this breakend assembled into a contig that does not support the breakpoint.\">\n##INFO=<ID=BANSRQ,Number=1,Type=Float,Description=\"Quality score of split reads at this breakend assembled into a contig that does not support the breakpoint.\">\n##INFO=<ID=BAQ,Number=1,Type=Float,Description=\"Quality score of assemblies supporting just local breakend\">\n##INFO=<ID=BASRP,Number=1,Type=Integer,Description=\"Count of read pairs incorporated into any breakend assembly\">\n##INFO=<ID=BASSR,Number=1,Type=Integer,Description=\"Count of split, soft clipped or indel-containing reads incorporated into any breakend assemblies\">\n##INFO=<ID=BEALN,Number=.,Type=String,Description=\"Potential alignment locations of breakend sequence in the format chr:start|strand|cigar|mapq. Depending on the alignment information available, strand and mapq may be empty.\">\n##INFO=<ID=BEID,Number=.,Type=String,Description=\"Identifiers of assemblies supporting the variant.\">\n##INFO=<ID=BEIDH,Number=.,Type=Integer,Description=\"Remote chimeric alignment offset of corresponding BEID assembly.\">\n##INFO=<ID=BEIDL,Number=.,Type=Integer,Description=\"Local chimeric alignment offset of corresponding BEID assembly. \">\n##INFO=<ID=BQ,Number=1,Type=Float,Description=\"Quality score of breakend evidence\">\n##INFO=<ID=BSC,Number=1,Type=Integer,Description=\"Count of soft clips supporting just local breakend\">\n##INFO=<ID=BSCQ,Number=1,Type=Float,Description=\"Quality score of soft clips supporting just local breakend\">\n##INFO=<ID=BUM,Number=1,Type=Integer,Description=\"Count of read pairs (with one read unmapped) supporting just local breakend\">\n##INFO=<ID=BUMQ,Number=1,Type=Float,Description=\"Quality score of read pairs (with one read unmapped) supporting just local breakend\">\n##INFO=<ID=BVF,Number=1,Type=Integer,Description=\"Count of fragments providing breakend for the variant allele.\">\n##INFO=<ID=CAS,Number=1,Type=Integer,Description=\"Count of complex compound breakpoint assemblies supporting breakpoint from elsewhere\">\n##INFO=<ID=CASQ,Number=1,Type=Float,Description=\"Quality score of complex compound breakpoint assemblies supporting breakpoint from elsewhere\">\n##INFO=<ID=CIEND,Number=2,Type=Integer,Description=\"Confidence interval around END for imprecise variants\">\n##INFO=<ID=CIPOS,Number=2,Type=Integer,Description=\"Confidence interval around POS for imprecise variants\">\n##INFO=<ID=CIRPOS,Number=2,Type=Integer,Description=\"Confidence interval around remote breakend POS for imprecise variants\">\n##INFO=<ID=CQ,Number=1,Type=Float,Description=\"Breakpoint quality score before evidence reallocation\">\n##INFO=<ID=END,Number=1,Type=Integer,Description=\"Stop position of the interval\">\n##INFO=<ID=EVENT,Number=1,Type=String,Description=\"ID of event associated to breakend\">\n##INFO=<ID=HOMLEN,Number=.,Type=Integer,Description=\"Length of base pair identical micro-homology at event breakpoints\">\n##INFO=<ID=HOMSEQ,Number=.,Type=String,Description=\"Sequence of base pair identical micro-homology at event breakpoints\">\n##INFO=<ID=IC,Number=1,Type=Integer,Description=\"Count of read indels supporting breakpoint\">\n##INFO=<ID=IHOMPOS,Number=2,Type=Integer,Description=\"Position of inexact homology\">\n##INFO=<ID=IMPRECISE,Number=0,Type=Flag,Description=\"Imprecise structural variation\">\n##INFO=<ID=IQ,Number=1,Type=Float,Description=\"Quality score of read indels supporting breakpoint\">\n##INFO=<ID=PARID,Number=1,Type=String,Description=\"ID of partner breakend\">\n##INFO=<ID=RAS,Number=1,Type=Integer,Description=\"Count of assemblies supporting breakpoint from remote breakend\">\n##INFO=<ID=RASQ,Number=1,Type=Float,Description=\"Quality score of assemblies supporting breakpoint from remote breakend\">\n##INFO=<ID=REF,Number=1,Type=Integer,Description=\"Count of reads mapping across this breakend\">\n##INFO=<ID=REFPAIR,Number=1,Type=Integer,Description=\"Count of reference read pairs spanning this breakpoint supporting the reference allele\">\n##INFO=<ID=RF,Number=1,Type=Integer,Description=\"Reference fragments. Count of fragments suspporting the reference allele and not the variant allele.\">\n##INFO=<ID=RP,Number=1,Type=Integer,Description=\"Count of read pairs supporting breakpoint\">\n##INFO=<ID=RPQ,Number=1,Type=Float,Description=\"Quality score of read pairs supporting breakpoint\">\n##INFO=<ID=RSI,Number=.,Type=Integer,Description=\"Support interval offsets of partner breakend.\">\n##INFO=<ID=SB,Number=1,Type=Float,Description=\"Strand bias of the reads supporting the variant.1 indicates that reads would be aligned to the positive strand if the reference was changed to the variant allele. 0 indicates that reads bases would be aligned to the negative strand if the reference was changed to the variant allele. Strand bias is calculated purely from supporting reads and exclude read pair support since these are 100% strand bias. Note that reads both directly supporting the variant, and supporting via assembly will be double-counted. Both breakpoint and breakend supporting reads are included.\">\n##INFO=<ID=SC,Number=1,Type=String,Description=\"CIGAR for displaying anchoring alignment of any contributing evidence and microhomologies.\">\n##INFO=<ID=SELF,Number=0,Type=Flag,Description=\"Indicates a breakpoint is self-intersecting\">\n##INFO=<ID=SI,Number=.,Type=Integer,Description=\"Support interval offsets from breakend position in which at least one supporting read/read pair/assembly is mapped.\">\n##INFO=<ID=SR,Number=1,Type=Integer,Description=\"Count of split reads supporting breakpoint\">\n##INFO=<ID=SRQ,Number=1,Type=Float,Description=\"Quality score of split reads supporting breakpoint\">\n##INFO=<ID=SVLEN,Number=.,Type=Integer,Description=\"Difference in length between REF and ALT alleles\">\n##INFO=<ID=SVTYPE,Number=1,Type=String,Description=\"Type of structural variant\">\n##INFO=<ID=VF,Number=1,Type=Integer,Description=\"Count of fragments suspporting the variant breakpoint allele and not the reference 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0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:83.18:0.00:345:25:4:83.18:0:0.00:4\nX\t154348599\tgridss304_59o\tA\tA[X:154348790[\t63.46\tLOW_QUAL;NO_ASSEMBLY\tAS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BQ=27.54;BSC=1;BSCQ=27.54;BUM=0;BUMQ=0.00;BVF=1;CAS=0;CASQ=0.00;CIPOS=-13,13;CIRPOS=-26,26;CQ=63.46;EVENT=gridss304_59;IC=0;IMPRECISE;IQ=0.00;PARID=gridss304_59h;RAS=0;RASQ=0.00;REF=430;REFPAIR=29;RP=3;RPQ=63.46;SB=0.0;SC=101M65D115M1X25N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=3\tGT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF\t.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:27.54:1:27.54:0:0.00:1:0.00:0:0.00:63.46:0.00:430:29:3:63.46:0:0.00:3\nX\t154348790\tgridss304_59h\tC\t]X:154348599]C\t63.46\tLOW_QUAL;NO_ASSEMBLY\tAS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-26,26;CIRPOS=-13,13;CQ=63.46;EVENT=gridss304_59;IC=0;IMPRECISE;IQ=0.00;PARID=gridss304_59o;RAS=0;RASQ=0.00;REF=170;REFPAIR=20;RP=3;RPQ=63.46;SC=1X51N1X255M;SR=0;SRQ=0.00;SVTYPE=BND;VF=3\tGT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF\t.:0.00:0:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:63.46:0.00:170:20:3:63.46:0:0.00:3\nX\t154348939\tgridss304_62o\tT\tT[X:154349033[\t125.28\tLOW_QUAL;SINGLE_ASSEMBLY\tAS=1;ASQ=62.64;ASRP=3;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm304-263;BEIDH=2;BEIDL=0;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-21,22;CIRPOS=-19,20;CQ=167.89;EVENT=gridss304_62;IC=0;IMPRECISE;IQ=0.00;PARID=gridss304_62h;RAS=0;RASQ=0.00;REF=472;REFPAIR=41;RP=3;RPQ=62.64;SC=193M71D1X42N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=3\tGT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF\t.:62.64:3:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:125.28:0.00:472:41:3:62.64:0:0.00:3\nX\t154349017\tgridss304_64o\tG\tG[X:154349146[\t168.77\tLOW_QUAL;SINGLE_ASSEMBLY\tAS=1;ASQ=84.38;ASRP=4;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm304-262;BEIDH=2;BEIDL=0;BQ=64.95;BSC=3;BSCQ=64.95;BUM=0;BUMQ=0.00;BVF=3;CAS=0;CASQ=0.00;CIPOS=-47,47;CIRPOS=-47,47;CQ=168.77;EVENT=gridss304_64;IC=0;IMPRECISE;IQ=0.00;PARID=gridss304_64h;RAS=0;RASQ=0.00;REF=311;REFPAIR=23;RP=4;RPQ=84.38;SB=0.6666667;SC=101M8D104M1X93N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=4\tGT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF\t.:84.38:4:0:0:0.00:0:0.00:0.00:0:0:64.95:3:64.95:0:0.00:3:0.00:0:0.00:168.77:0.00:311:23:4:84.38:0:0.00:4\nX\t154349033\tgridss304_62h\tG\t]X:154348939]G\t125.28\tLOW_QUAL;SINGLE_ASSEMBLY\tAS=0;ASQ=0.00;ASRP=3;ASSR=0;BA=0;BANRP=3;BANRPQ=62.64;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm304-263;BEIDH=0;BEIDL=2;BQ=24.64;BSC=1;BSCQ=24.64;BUM=0;BUMQ=0.00;BVF=1;CAS=0;CASQ=0.00;CIPOS=-19,20;CIRPOS=-21,22;CQ=167.89;EVENT=gridss304_62;IC=0;IMPRECISE;IQ=0.00;PARID=gridss304_62o;RAS=1;RASQ=62.64;REF=346;REFPAIR=23;RP=3;RPQ=62.64;SB=1.0;SC=1X38N1X126M;SR=0;SRQ=0.00;SVTYPE=BND;VF=3\tGT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF\t.:0.00:3:0:3:62.64:0:0.00:0.00:0:0:24.64:1:24.64:0:0.00:1:0.00:0:0.00:125.28:62.64:346:23:3:62.64:0:0.00:3\nX\t154349146\tgridss304_64h\tT\t]X:154349017]T\t168.77\tLOW_QUAL;SINGLE_ASSEMBLY\tAS=0;ASQ=0.00;ASRP=4;ASSR=0;BA=0;BANRP=1;BANRPQ=21.41;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm304-262;BEIDH=0;BEIDL=2;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-47,47;CIRPOS=-47,47;CQ=168.77;EVENT=gridss304_64;IC=0;IMPRECISE;IQ=0.00;PARID=gridss304_64o;RAS=1;RASQ=84.38;REF=244;REFPAIR=20;RP=4;RPQ=84.38;SC=1X93N1X136M;SR=0;SRQ=0.00;SVTYPE=BND;VF=4\tGT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF\t.:0.00:4:0:1:21.41:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:168.77:84.38:244:20:4:84.38:0:0.00:4\n"
  },
  {
    "path": "tests/AnnotSV/test_13_txFile/input/txFile.check1.txt",
    "content": "dddd NM_033486.2 lll\nENST00000341832\n"
  },
  {
    "path": "tests/AnnotSV/test_13_txFile/input/txFile.check2.txt",
    "content": "tutu\tNM_001167738\ttata\r\n"
  },
  {
    "path": "tests/AnnotSV/test_13_txFile/input/txFile.check3.txt",
    "content": "dddd NM_033486.2 lll\nENST00000341832\n"
  },
  {
    "path": "tests/AnnotSV/test_14_candidateGenesFile/5",
    "content": ""
  },
  {
    "path": "tests/AnnotSV/test_14_candidateGenesFile/command_Tcl.sh",
    "content": "#!/bin/bash -x\n\nset -eo pipefail\n\n\ncut=\"$ANNOTSV/tests/AnnotSV/scripts/cutWithColumnNames.tcl\"\n\n\n# -candidateGenesFile:            Path of a file containing the candidate genes of the user (gene names can be space-separated, tabulation-separated, or line-break-separated)\n# -candidateGenesFiltering:       To select only the SV annotations (\"split\" and \"full\") overlapping a gene from the \"candidateGenesFile\"\n\n# candidateGenesFile.txt:\n# BBS5 CDK11A SSU72\n\n\n# Run without the \"-candidateGenesFiltering\" option\n###################################################\n\nmkdir -p ./output\nrm -f \"./output/test.without_tcl.annotated.tsv\"\n$ANNOTSV/bin/AnnotSV -SVinputFile \"./input/test.bed\" -SVinputInfo 1 -outputFile \"./output/test.without_tcl.annotated.tsv\" -svtBEDcol 5 -candidateGenesFile \"./input/candidateGenesFile.txt\" -genomeBuild GRCh37\n\nnLines_Without=`wc -l \"./output/test.without_tcl.annotated.tsv\" | cut -d\" \" -f 1`\n\n\n# Run with the \"-candidateGenesFiltering\" option\n################################################\n\nrm -f \"./output/test.with_tcl.annotated.tsv\"\n$ANNOTSV/bin/AnnotSV -SVinputFile \"./input/test.bed\" -SVinputInfo 1 -outputFile \"./output/test.with_tcl.annotated.tsv\" -svtBEDcol 5 -candidateGenesFile \"./input/candidateGenesFile.txt\" -candidateGenesFiltering 1 -genomeBuild GRCh37 \n\nnLines_With=`wc -l \"./output/test.with_tcl.annotated.tsv\" | cut -d\" \" -f 1`\n\nnBadLines_With=`$cut \"./output/test.with_tcl.annotated.tsv\" \"AnnotSV_ID;Gene_name;Annotation_mode\" | egrep -v \"BBS5|CDK11A|SSU72\" | wc -l`\n# => Only the header line\n# => $nBadLines_With == 1\n\n\n# Check the line filtering\n##########################\nif [ $nLines_Without > $nLines_With ]\nthen\n        echo \"Ok\"\nelse\n        echo \"error 1: the \\\"-candidateGenesFiltering\\\" option does not work\"\n        exit 1\nfi\n\nif [ $nBadLines_With == 1 ]\nthen\n        echo \"Ok\"\nelse\n        echo \"error 1: the \\\"-candidateGenesFiltering\\\" option does not work\"\n        exit 1\nfi\n\n\necho \"ok - Finished\"\n\n"
  },
  {
    "path": "tests/AnnotSV/test_14_candidateGenesFile/input/candidateGenesFile.txt",
    "content": "BBS5 CDK11A \nSSU72\n"
  },
  {
    "path": "tests/AnnotSV/test_14_candidateGenesFile/input/test.bed",
    "content": "#chrom\tstart\tend\tscore\tSV type\n1\t1490001\t1530001\t0222\tDUP\n1\t1613810\t1687739\t0.25\tDEL\n1\t94190001\t95198431\t0.001\tDUP\n"
  },
  {
    "path": "tests/AnnotSV/test_15_EmptyVCF/command_Tcl.sh",
    "content": "#!/bin/bash -x\n\nset -eo pipefail\n\n\n# VCF input: \n# => contains header lines\n# => do not contain variant\n\n# => Error message in the output:\n#    ############################################################################\n#    SVinputFile (test.vcf is empty, no SV to annotate - Exit without error.\n#    ############################################################################\n\nmkdir -p ./output\nrm -f \"./output/test_tcl.annotated.tsv\" \"./output/test_tcl.log\"\n$ANNOTSV/bin/AnnotSV -SVinputFile \"./input/test.vcf\" -SVinputInfo 1 -outputFile \"./output/test_tcl.annotated.tsv\" &> \"./output/test_tcl.log\"\n\nif [ `grep -c \"SVinputFile (./input/test.vcf is empty, no SV to annotate - Exit without error.\" \"./output/test_tcl.log\"` == 1 ]\nthen\n        echo \"Ok\"\nelse\n        echo \"error 1: \\\"SVinputFile (test.vcf is empty, no SV to annotate - Exit without error.\\\" error message NOT found\"\n        exit 1\nfi\n\n\necho \"ok - Finished\"\n\n"
  },
  {
    "path": "tests/AnnotSV/test_15_EmptyVCF/input/test.vcf",
    "content": "##fileformat=VCFv4.2\n##ALT=<ID=INV,Description=\"Inversion\">\n##FILTER=<ID=ASSEMBLY_ONLY,Description=\"Variant is supported only by assembly evidence.\">\n##FILTER=<ID=ASSEMBLY_TOO_FEW_READ,Description=\"Not enough reads contribute to this assembly as specified by 'assembly.minReads'\">\n##FILTER=<ID=ASSEMBLY_TOO_SHORT,Description=\"This assembly is shorter than a read length\">\n##FILTER=<ID=INSUFFICIENT_SUPPORT,Description=\"Does not reach the required threshold quality for calling as specified by 'variantcalling.minScore'\">\n##FILTER=<ID=LOW_QUAL,Description=\"Low quality call as specified by 'variantcalling.lowQuality'\">\n##FILTER=<ID=NO_ASSEMBLY,Description=\"No assembly supporting this variant could be found.\">\n##FILTER=<ID=REF,Description=\"Breakpoint corresponds to reference allele\">\n##FILTER=<ID=SINGLE_ASSEMBLY,Description=\"Only one side of the breakpoint could be assembled.\">\n##FILTER=<ID=SINGLE_SUPPORT,Description=\"Supported by fewer than 'variantcalling.minReads' fragments\">\n##FILTER=<ID=SMALL_EVENT,Description=\"Event size is smaller than the minimum reportable size specified by 'variantcalling.minSize'\">\n##FORMAT=<ID=ASQ,Number=1,Type=Float,Description=\"Pro-rata quality score contribution of assemblies supporting breakpoint\">\n##FORMAT=<ID=ASRP,Number=1,Type=Integer,Description=\"Count of read pairs incorporated into any breakpoint assembly\">\n##FORMAT=<ID=ASSR,Number=1,Type=Integer,Description=\"Count of split, soft clipped or indel-containing reads incorporated into any breakpoint assemblies\">\n##FORMAT=<ID=BANRP,Number=1,Type=Integer,Description=\"Count of read pairs at this breakend assembled into a contig that does not support the breakpoint.\">\n##FORMAT=<ID=BANRPQ,Number=1,Type=Integer,Description=\"Quality score of read pairs at this breakend assembled into a contig that does not support the breakpoint.\">\n##FORMAT=<ID=BANSR,Number=1,Type=Integer,Description=\"Count of split reads at this breakend assembled into a contig that does not support the breakpoint.\">\n##FORMAT=<ID=BANSRQ,Number=1,Type=Integer,Description=\"Quality score of split reads at this breakend assembled into a contig that does not support the breakpoint.\">\n##FORMAT=<ID=BAQ,Number=1,Type=Float,Description=\"Pro-rata quality score contribution of assemblies supporting just local breakend\">\n##FORMAT=<ID=BASRP,Number=1,Type=Integer,Description=\"Count of read pairs incorporated into any breakend assembly\">\n##FORMAT=<ID=BASSR,Number=1,Type=Integer,Description=\"Count of split, soft clipped or indel-containing reads incorporated into any breakend assemblies\">\n##FORMAT=<ID=BQ,Number=1,Type=Float,Description=\"Quality score of breakend evidence after evidence reallocation\">\n##FORMAT=<ID=BSC,Number=1,Type=Integer,Description=\"Count of soft clips supporting just local breakend per category\">\n##FORMAT=<ID=BSCQ,Number=1,Type=Float,Description=\"Quality score of soft clips supporting just local breakend per category\">\n##FORMAT=<ID=BUM,Number=1,Type=Integer,Description=\"Count of read pairs (with one read unmapped) supporting just local breakend per category\">\n##FORMAT=<ID=BUMQ,Number=1,Type=Float,Description=\"Quality score of read pairs (with one read unmapped) supporting just local breakend per category\">\n##FORMAT=<ID=BVF,Number=1,Type=Integer,Description=\"Count of fragments providing breakend for the variant allele.\">\n##FORMAT=<ID=CASQ,Number=1,Type=Float,Description=\"Pro-rata quality score of complex compound breakpoint assemblies supporting breakpoint from elsewhere\">\n##FORMAT=<ID=GT,Number=1,Type=String,Description=\"Genotype\">\n##FORMAT=<ID=IC,Number=1,Type=Integer,Description=\"Count of read indels supporting breakpoint per category\">\n##FORMAT=<ID=IQ,Number=1,Type=Float,Description=\"Quality score of read indels supporting breakpoint per category\">\n##FORMAT=<ID=QUAL,Number=1,Type=Float,Description=\"Quality score of breakend evidence after evidence reallocation\">\n##FORMAT=<ID=RASQ,Number=1,Type=Float,Description=\"Pro-rata quality score contribution of assemblies supporting breakpoint from remote breakend\">\n##FORMAT=<ID=REF,Number=1,Type=Integer,Description=\"Count of reads mapping across this breakend\">\n##FORMAT=<ID=REFPAIR,Number=1,Type=Integer,Description=\"Count of reference read pairs spanning this breakpoint supporting the reference allele\">\n##FORMAT=<ID=RF,Number=1,Type=Integer,Description=\"Reference fragments. Count of fragments suspporting the reference allele and not the variant allele.\">\n##FORMAT=<ID=RP,Number=1,Type=Integer,Description=\"Count of read pairs supporting breakpoint per category\">\n##FORMAT=<ID=RPQ,Number=1,Type=Float,Description=\"Quality score of read pairs supporting breakpoint per category\">\n##FORMAT=<ID=SR,Number=1,Type=Integer,Description=\"Count of split reads supporting breakpoint per category\">\n##FORMAT=<ID=SRQ,Number=1,Type=Float,Description=\"Quality score of split reads supporting breakpoint per category\">\n##FORMAT=<ID=VF,Number=1,Type=Integer,Description=\"Count of fragments suspporting the variant breakpoint allele and not the reference allele.\">\n##INFO=<ID=AS,Number=1,Type=Integer,Description=\"Count of assemblies supporting breakpoint\">\n##INFO=<ID=ASQ,Number=1,Type=Float,Description=\"Quality score of assemblies supporting breakpoint\">\n##INFO=<ID=ASRP,Number=1,Type=Integer,Description=\"Count of read pairs incorporated into any breakpoint assembly\">\n##INFO=<ID=ASSR,Number=1,Type=Integer,Description=\"Count of split, soft clipped or indel-containing reads incorporated into any breakpoint assemblies\">\n##INFO=<ID=BA,Number=1,Type=Integer,Description=\"Count of assemblies supporting just local breakend\">\n##INFO=<ID=BANRP,Number=1,Type=Integer,Description=\"Count of read pairs at this breakend assembled into a contig that does not support the breakpoint.\">\n##INFO=<ID=BANRPQ,Number=1,Type=Integer,Description=\"Quality score of read pairs at this breakend assembled into a contig that does not support the breakpoint.\">\n##INFO=<ID=BANSR,Number=1,Type=Integer,Description=\"Count of split reads at this breakend assembled into a contig that does not support the breakpoint.\">\n##INFO=<ID=BANSRQ,Number=1,Type=Integer,Description=\"Quality score of split reads at this breakend assembled into a contig that does not support the breakpoint.\">\n##INFO=<ID=BAQ,Number=1,Type=Float,Description=\"Quality score of assemblies supporting just local breakend\">\n##INFO=<ID=BASRP,Number=1,Type=Integer,Description=\"Count of read pairs incorporated into any breakend assembly\">\n##INFO=<ID=BASSR,Number=1,Type=Integer,Description=\"Count of split, soft clipped or indel-containing reads incorporated into any breakend assemblies\">\n##INFO=<ID=BEALN,Number=.,Type=String,Description=\"Potential alignment locations of breakend sequence in the format chr:start|strand|cigar|mapq. Depending on the alignment information available, strand and mapq may be empty.\">\n##INFO=<ID=BEID,Number=.,Type=String,Description=\"Identifiers of assemblies supporting the variant.\">\n##INFO=<ID=BEIDH,Number=.,Type=Integer,Description=\"Remote chimeric alignment offset of corresponding BEID assembly.\">\n##INFO=<ID=BEIDL,Number=.,Type=Integer,Description=\"Local chimeric alignment offset of corresponding BEID assembly. \">\n##INFO=<ID=BQ,Number=1,Type=Float,Description=\"Quality score of breakend evidence\">\n##INFO=<ID=BSC,Number=1,Type=Integer,Description=\"Count of soft clips supporting just local breakend\">\n##INFO=<ID=BSCQ,Number=1,Type=Float,Description=\"Quality score of soft clips supporting just local breakend\">\n##INFO=<ID=BUM,Number=1,Type=Integer,Description=\"Count of read pairs (with one read unmapped) supporting just local breakend\">\n##INFO=<ID=BUMQ,Number=1,Type=Float,Description=\"Quality score of read pairs (with one read unmapped) supporting just local breakend\">\n##INFO=<ID=BVF,Number=1,Type=Integer,Description=\"Count of fragments providing breakend for the variant allele.\">\n##INFO=<ID=CAS,Number=1,Type=Integer,Description=\"Count of complex compound breakpoint assemblies supporting breakpoint from elsewhere\">\n##INFO=<ID=CASQ,Number=1,Type=Float,Description=\"Quality score of complex compound breakpoint assemblies supporting breakpoint from elsewhere\">\n##INFO=<ID=CIEND,Number=2,Type=Integer,Description=\"Confidence interval around END for imprecise variants\">\n##INFO=<ID=CIPOS,Number=2,Type=Integer,Description=\"Confidence interval around POS for imprecise variants\">\n##INFO=<ID=CIRPOS,Number=2,Type=Integer,Description=\"Confidence interval around remote breakend POS for imprecise variants\">\n##INFO=<ID=CQ,Number=1,Type=Float,Description=\"Breakpoint quality score before evidence reallocation\">\n##INFO=<ID=END,Number=1,Type=Integer,Description=\"Stop position of the interval\">\n##INFO=<ID=EVENT,Number=1,Type=String,Description=\"ID of event associated to breakend\">\n##INFO=<ID=HOMLEN,Number=.,Type=Integer,Description=\"Length of base pair identical micro-homology at event breakpoints\">\n##INFO=<ID=HOMSEQ,Number=.,Type=String,Description=\"Sequence of base pair identical micro-homology at event breakpoints\">\n##INFO=<ID=IC,Number=1,Type=Integer,Description=\"Count of read indels supporting breakpoint\">\n##INFO=<ID=IHOMPOS,Number=2,Type=Integer,Description=\"Position of inexact homology\">\n##INFO=<ID=IMPRECISE,Number=0,Type=Flag,Description=\"Imprecise structural variation\">\n##INFO=<ID=IQ,Number=1,Type=Float,Description=\"Quality score of read indels supporting breakpoint\">\n##INFO=<ID=PARID,Number=1,Type=String,Description=\"ID of partner breakend\">\n##INFO=<ID=RAS,Number=1,Type=Integer,Description=\"Count of assemblies supporting breakpoint from remote breakend\">\n##INFO=<ID=RASQ,Number=1,Type=Float,Description=\"Quality score of assemblies supporting breakpoint from remote breakend\">\n##INFO=<ID=REF,Number=1,Type=Integer,Description=\"Count of reads mapping across this breakend\">\n##INFO=<ID=REFPAIR,Number=1,Type=Integer,Description=\"Count of reference read pairs spanning this breakpoint supporting the reference allele\">\n##INFO=<ID=RF,Number=1,Type=Integer,Description=\"Reference fragments. Count of fragments suspporting the reference allele and not the variant allele.\">\n##INFO=<ID=RP,Number=1,Type=Integer,Description=\"Count of read pairs supporting breakpoint\">\n##INFO=<ID=RPQ,Number=1,Type=Float,Description=\"Quality score of read pairs supporting breakpoint\">\n##INFO=<ID=RSI,Number=.,Type=Integer,Description=\"Support interval offsets of partner breakend.\">\n##INFO=<ID=SB,Number=1,Type=Float,Description=\"Strand bias of the reads supporting the variant.1 indicates that reads would be aligned to the positive strand if the reference was changed to the variant allele. 0 indicates that reads bases would be aligned to the negative strand if the reference was changed to the variant allele. Strand bias is calculated purely from supporting reads and exclude read pair support since these are 100% strand bias. Note that reads both directly supporting the variant, and supporting via assembly will be double-counted. Both breakpoint and breakend supporting reads are included.\">\n##INFO=<ID=SC,Number=1,Type=String,Description=\"CIGAR for displaying anchoring alignment of any contributing evidence and microhomologies.\">\n##INFO=<ID=SELF,Number=0,Type=Flag,Description=\"Indicates a breakpoint is self-intersecting\">\n##INFO=<ID=SI,Number=.,Type=Integer,Description=\"Support interval offsets from breakend position in which at least one supporting read/read pair/assembly is mapped.\">\n##INFO=<ID=SR,Number=1,Type=Integer,Description=\"Count of split reads supporting breakpoint\">\n##INFO=<ID=SRQ,Number=1,Type=Float,Description=\"Quality score of split reads supporting breakpoint\">\n##INFO=<ID=SVLEN,Number=.,Type=Integer,Description=\"Difference in length between REF and ALT alleles\">\n##INFO=<ID=SVTYPE,Number=1,Type=String,Description=\"Type of structural variant\">\n##INFO=<ID=VF,Number=1,Type=Integer,Description=\"Count of fragments suspporting the variant breakpoint allele and not the reference allele.\">\n##contig=<ID=1,length=249250621>\n##contig=<ID=2,length=243199373>\n##contig=<ID=3,length=198022430>\n##contig=<ID=4,length=191154276>\n##contig=<ID=5,length=180915260>\n##contig=<ID=6,length=171115067>\n##contig=<ID=7,length=159138663>\n##contig=<ID=8,length=146364022>\n##contig=<ID=9,length=141213431>\n##contig=<ID=10,length=135534747>\n##contig=<ID=11,length=135006516>\n##contig=<ID=12,length=133851895>\n##contig=<ID=13,length=115169878>\n##contig=<ID=14,length=107349540>\n##contig=<ID=15,length=102531392>\n##contig=<ID=16,length=90354753>\n##contig=<ID=17,length=81195210>\n##contig=<ID=18,length=78077248>\n##contig=<ID=19,length=59128983>\n##contig=<ID=20,length=63025520>\n##contig=<ID=21,length=48129895>\n##contig=<ID=22,length=51304566>\n##contig=<ID=X,length=155270560>\n##contig=<ID=Y,length=59373566>\n##contig=<ID=MT,length=16569>\n#CHROM\tPOS\tID\tREF\tALT\tQUAL\tFILTER\tINFO\tFORMAT\tsample_id\n"
  },
  {
    "path": "tests/AnnotSV/test_16_reciprocalYes/command_Tcl.sh",
    "content": "#!/bin/bash -x\n\nset -eo pipefail\n\ncut=\"$ANNOTSV/tests/AnnotSV/scripts/cutWithColumnNames.tcl\"\n\n\n# -reciprocal:   Use of a reciprocal overlap between SV and user features (only for annotations with features overlapping the SV)\n#                Values: 0 (default) or 1\n#                <=> Only for custom SVincludedInFt annotations\n#\n# NOTE: It is to notice that, for pathogenic SV annotations, a reciprocal overlap cannot be used. The “-reciprocal” option can only be used with custom annotations with features overlapping the SV.\n# NOTE: It is to notice that, for benign SV annotations, a reciprocal overlap cannot be used. The “-reciprocal” option can only be used with custom annotations with features overlapping the SV.\n#\n# Custom annotations:\n# - By placing the BED file in the “SVincludedInFt” directory, only the features overlapping 100% of the SV will be reported.\n# In this case, a reciprocal overlap can be used (see \"reciprocal\" option in USAGE/OPTIONS).\n\n\ncp \"./input/user_SVincludedInFt.bed\" $ANNOTSV/share/AnnotSV/Annotations_Human/Users/GRCh37/SVincludedInFt/\n\n\n# Checks of the \"-reciprocal 0\" and \"-overlap 80\" options with a BED input file:\n################################################################################\n\nmkdir -p ./output\nrm -f \"./output/testBED_tcl.annotated.reciprocalNo.Overlap80.tsv\"\n$ANNOTSV/bin/AnnotSV -SVinputFile \"./input/test.bed\" -SVinputInfo 1 -outputFile \"./output/testBED_tcl.annotated.reciprocalNo.Overlap80.tsv\"  -svtBEDcol 4 -reciprocal 0 -overlap 80 -genomeBuild GRCh37\n# => \"SVincludedInFt\" feature reported in the \"BBBBBBBBBBBBBBBBBBBB\" column\n\nannotations=`$cut \"./output/testBED_tcl.annotated.reciprocalNo.Overlap80.tsv\" \"BBBBBBBBBBBBBBBBBBBB\" | sort -u`\nannotations=`echo $annotations | sed \"s/ /_/\"`\nif [ $annotations == \"BBBBBBBBBBBBBBBBBBBB_SVincludedInFt\" ]\nthen\n        echo \"Ok\"\nelse\n        echo \"error 1: the \\\"-reciprocal\\\" option does not work\"\n        exit 1\nfi\n\n\n\n# Checks of the \"-reciprocal 1\" and \"-overlap 80\" options with a BED input file:\n################################################################################\n\nrm -f \"./output/testBED_tcl.annotated.reciprocalYes.Overlap80.tsv\"\n$ANNOTSV/bin/AnnotSV -SVinputFile \"./input/test.bed\" -SVinputInfo 1 -outputFile \"./output/testBED_tcl.annotated.reciprocalYes.Overlap80.tsv\" -svtBEDcol 4 -reciprocal 1 -overlap 80 -genomeBuild GRCh37\n# => \"SVincludedInFt\" feature not reported in the \"BBBBBBBBBBBBBBBBBBBB\" column\n\nannotations=`$cut \"./output/testBED_tcl.annotated.reciprocalYes.Overlap80.tsv\" \"BBBBBBBBBBBBBBBBBBBB\" | sort -u`\n\nif [ $annotations == \"BBBBBBBBBBBBBBBBBBBB\" ]\nthen\n        echo \"Ok\"\nelse\n        echo \"error 1: the \\\"-reciprocal\\\" option does not work\"\n        exit 1\nfi\n\n\n\n# Checks of the \"-reciprocal 0\" and \"-overlap 80\" options with a VCF input file:\n################################################################################\n\nrm -f \"./output/testVCF_tcl.annotated.reciprocalNo.Overlap80.tsv\"\n$ANNOTSV/bin/AnnotSV -SVinputFile \"./input/test.vcf\" -SVinputInfo 1 -outputFile \"./output/testVCF_tcl.annotated.reciprocalNo.Overlap80.tsv\" -reciprocal 0 -overlap 80 -genomeBuild GRCh37\n# => \"SVincludedInFt\" feature reported in the \"BBBBBBBBBBBBBBBBBBBB\" column\n\nannotations=`$cut \"./output/testVCF_tcl.annotated.reciprocalNo.Overlap80.tsv\" \"BBBBBBBBBBBBBBBBBBBB\" | sort -u`\nannotations=`echo $annotations | sed \"s/ /_/\"`\n\nif [ $annotations == \"BBBBBBBBBBBBBBBBBBBB_SVincludedInFt\" ]\nthen\n        echo \"Ok\"\nelse\n        echo \"error 1: the \\\"-reciprocal\\\" option does not work\"\n        exit 1\nfi\n\n\n\n# Checks of the \"-reciprocal 1\" and \"-overlap 80\" options with a VCF input file:\n################################################################################\n\nrm -f \"./output/testVCF_tcl.annotated.reciprocalYes.Overlap80.tsv\"\n$ANNOTSV/bin/AnnotSV -SVinputFile \"./input/test.vcf\" -SVinputInfo 1 -outputFile \"./output/testVCF_tcl.annotated.reciprocalYes.Overlap80.tsv\" -reciprocal 1 -overlap 80 -genomeBuild GRCh37\n# => \"SVincludedInFt\" feature not reported in the \"BBBBBBBBBBBBBBBBBBBB\" column\n\nannotations=`$cut \"./output/testVCF_tcl.annotated.reciprocalYes.Overlap80.tsv\" \"BBBBBBBBBBBBBBBBBBBB\" | sort -u`\n\nif [ $annotations == \"BBBBBBBBBBBBBBBBBBBB\" ]\nthen\n        echo \"Ok\"\nelse\n        echo \"error 1: the \\\"-reciprocal\\\" option does not work\"\n        exit 1\nfi\n\n\n\n## Nettoyage :\n##############\nrm $ANNOTSV/share/AnnotSV/Annotations_Human/Users/GRCh37/SVincludedInFt/user_SVincludedInFt.*\n\n\n\n\necho \"ok - Finished\"\n\n"
  },
  {
    "path": "tests/AnnotSV/test_16_reciprocalYes/input/test.bed",
    "content": "#chrom\tstart\tend\ttutu\tSV type\n1\t2902537\t3529849\tii\tDEL\n"
  },
  {
    "path": "tests/AnnotSV/test_16_reciprocalYes/input/test.vcf",
    "content": "##fileformat=VCFv4.2\n#CHROM\tPOS\tID\tREF\tALT\tQUAL\tFILTER\tINFO\tFORMAT\tsample\n1\t2902537\t.\tN\t<DEL>\t72\tPASS\tEND=3529849;SVTYPE=DEL\tGT\t1/1\n"
  },
  {
    "path": "tests/AnnotSV/test_16_reciprocalYes/input/user_SVincludedInFt.bed",
    "content": "#chrom\tstart\tend\tBBBBBBBBBBBBBBBBBBBB\n1\t1902537\t4529849\tSVincludedInFt\n"
  },
  {
    "path": "tests/AnnotSV/test_17_rankFiltering/command_Tcl.sh",
    "content": "#!/bin/bash -x\n\nset -eo pipefail\n\n\ncut=\"$ANNOTSV/tests/AnnotSV/scripts/cutWithColumnNames.tcl\"\n\nfunction exists_in_list() {\n    LIST=$1\n    DELIMITER=$2\n    VALUE=$3\n    [[ \"$LIST\" =~ ($DELIMITER|^)$VALUE($DELIMITER|$) ]]\n}\n\n\n\n#########################################\n# Check the \"-rankFiltering\" option\n#########################################\n\n# -> 1  3 4 5 (pas de 2)\nmkdir -p ./output\nrm -f \"./output/test.1_tcl.annotated.tsv\"\n$ANNOTSV/bin/AnnotSV -SVinputFile \"./input/test.bed\" -SVinputInfo 1 -outputFile \"./output/test.1_tcl.annotated.tsv\" -svtBEDcol 4 -genomeBuild GRCh37\nfor v in `$cut \"./output/test.1_tcl.annotated.tsv\" \"ACMG_class\" | sort -u`\ndo\n        if ! exists_in_list \"1 3 4 5 ACMG_class full=1 full=3 full=4 full=5 full=NA NA\" \" \" \"$v\"\n        then\n                echo \"Error with ./input/test.bed\"\n                echo \"error 1\"\n                exit 1\n        fi\ndone\n\n\n# -> 1\nrm -f \"./output/test.2_tcl.annotated.tsv\"\n$ANNOTSV/bin/AnnotSV -SVinputFile \"./input/test.bed\" -SVinputInfo 1 -outputFile \"./output/test.2_tcl.annotated.tsv\" -svtBEDcol 4 -rankFiltering \"1-2\" -genomeBuild GRCh37\nfor v in `$cut \"./output/test.2_tcl.annotated.tsv\" \"ACMG_class\" | sort -u`\ndo\n        if ! exists_in_list \"1 2 ACMG_class full=1 full=2\" \" \" \"$v\"\n        then\n                echo \"Error with ./input/test.bed\"\n                echo \"error 1\"\n                exit 1\n        fi\ndone\n\n\n# -> 1 3\nrm -f \"./output/test.3_tcl.annotated.tsv\"\n$ANNOTSV/bin/AnnotSV -SVinputFile \"./input/test.bed\" -SVinputInfo 1 -outputFile \"./output/test.3_tcl.annotated.tsv\" -svtBEDcol 4 -rankFiltering \"1-3\" -genomeBuild GRCh37\nfor v in `$cut \"./output/test.3_tcl.annotated.tsv\" \"ACMG_class\" | sort -u`\ndo\n        if ! exists_in_list \"1 3 ACMG_class full=1 full=3\" \" \" \"$v\"\n        then\n                echo \"Error with ./input/test.bed\"\n                echo \"error 1\"\n                exit 1\n        fi\ndone\n\n\n# -> 1 3\nrm -f \"./output/test.4_tcl.annotated.tsv\"\n$ANNOTSV/bin/AnnotSV -SVinputFile \"./input/test.bed\" -SVinputInfo 1 -outputFile \"./output/test.4_tcl.annotated.tsv\" -svtBEDcol 4 -rankFiltering \"1,2,3\" -genomeBuild GRCh37\nfor v in `$cut \"./output/test.4_tcl.annotated.tsv\" \"ACMG_class\" | sort -u`\ndo\n        if ! exists_in_list \"1 3 ACMG_class full=1 full=3\" \" \" \"$v\"\n        then\n                echo \"Error with ./input/test.bed\"\n                echo \"error 1\"\n                exit 1\n        fi\ndone\n\n\n# -> 1 3 4\nrm -f \"./output/test.5_tcl.annotated.tsv\"\n$ANNOTSV/bin/AnnotSV -SVinputFile \"./input/test.bed\" -SVinputInfo 1 -outputFile \"./output/test.5_tcl.annotated.tsv\" -svtBEDcol 4 -rankFiltering \"1,2-4\" -genomeBuild GRCh37\nfor v in `$cut \"./output/test.5_tcl.annotated.tsv\" \"ACMG_class\" | sort -u`\ndo\n        if ! exists_in_list \"1 3 4 ACMG_class full=1 full=3 full=4\" \" \" \"$v\"\n        then\n                echo \"Error with ./input/test.bed\"\n                echo \"error 1\"\n                exit 1\n        fi\ndone\n\n\n\necho \"ok - Finished\"\n\n"
  },
  {
    "path": "tests/AnnotSV/test_17_rankFiltering/input/test.bed",
    "content": "chrom\tstart\tend\tsvtype\n1\t3995268\t3995269\tALU;TSD=null\n1\t6438160\t6445897\tDEL\n1\t8200707\t8211256\tDUP\n1\t17263114\t17273513\tCNV\n1\t17676165\t17677662\tDEL\n11\t66287088\t66288847\tDEL\nX\t6595308\t7515400\tDEL\nX\t8786514\t8788914\tDEL\n"
  },
  {
    "path": "tests/AnnotSV/test_18_VCFwithBrackets/command_Tcl.sh",
    "content": "#!/bin/bash -x\n\nset -eo pipefail\n\ncut=\"$ANNOTSV/tests/AnnotSV/scripts/cutWithColumnNames.tcl\"\n\n\n# The square-bracketed nomenclature (\"[[\") is used for DEL, DUP, INV, TRA.\n# Ex: \n# => Deletion:\n# \t1       11099650        .       N       N[1:11101794[     END=11101794;CHR2=1;SVTYPE=DEL;SVLEN=2144\n# => Translocation:\n# \t1       23224424        .       N       N]6:91004428]     END=91004428;CHR2=6;SVTYPE=TRA;\n\n# AnnotSV must be able to annotate DEL, DUP and INV in their entirety; and the TRA only at the breakend level.\n\n\n\n## Checking of the \"END\" value:\n###############################\n\n# -> Check of the end for \"TRA\" (We should have \"end = start\" )\n# -> Check of the end for the other SV type (end defined with END from INFO)\n\nmkdir -p ./output\nrm -f \"./output/triplesvmerge.CI0_tcl.annotated.tsv\" \"./output/tutu.CI0\"\n$ANNOTSV/bin/AnnotSV -SVinputFile \"./input/triplesvmerge.vcf\" -SVinputInfo 1 -outputFile \"./output/triplesvmerge.CI0_tcl.annotated.tsv\" -includeCI 0 -genomeBuild GRCh37\n\n$cut \"./output/triplesvmerge.CI0_tcl.annotated.tsv\" \"AnnotSV_ID;SV_type;Annotation_mode;SV_start;SV_end;INFO\" | grep full > \"./output/tutu.CI0\"\n\ntest=`$ANNOTSV/tests/AnnotSV/scripts/check_end_values.tcl \"./output/tutu.CI0\"`\n\nif [ $test == \"Ok\" ]\nthen\n        echo \"Ok\"\nelse\n        echo \"error 1: END coordinates for bracketed SV not good\"\n        exit 1\nfi\n\n\n\n\n## Vérification avec l'option \"-includeCI\" à 1 :\n################################################\n\n# Si l'on laisse l'option \"-includeCI\" à 1, end != start+1 dans certains cas pour les TRA (logique !) : On aura $end-$start = $ciend-$cipos+1\n# Ce VCF est un merge. On a 2 CIPOS : gridss_CIPOS et brass_CIPOS. Le code utilise le 1er trouvé dans la ligne.\nrm -f \"./output/triplesvmerge.CI1_tcl.annotated.tsv\" \"./output/tutu.CI1\"\n$ANNOTSV/bin/AnnotSV -SVinputFile \"./input/triplesvmerge.vcf\" -SVinputInfo 1 -outputFile \"./output/triplesvmerge.CI1_tcl.annotated.tsv\" -genomeBuild GRCh37\n\n$cut \"./output/triplesvmerge.CI1_tcl.annotated.tsv\" \"AnnotSV_ID;SV_type;Annotation_mode;SV_start;SV_end;INFO\" | grep \"TRA\" | grep full > \"./output/tutu.CI1\"\n\ntest=`$ANNOTSV/tests/AnnotSV/scripts/check_includeCI.tcl \"./output/tutu.CI1\"`\n\nif [ $test == \"Ok\" ]\nthen\n        echo \"Ok\"\nelse\n        echo \"error 1: END coordinates for bracketed SV not good with -includeCI set to 1\"\n        exit 1\nfi\n\n\n\n# GRIDSS output:\n# For each of both SV breakends, there are 2 annotation lines:\n# 1       11734839        gridss1_4o      C       C[1:11734958[  \n# 1       11734958        gridss1_4h      C       ]1:11734839]C  \n#################################################################\n\n#$ANNOTSV/bin/AnnotSV -SVinputFile ./input/INPUT_gridss_germline_output.sv.vcf  -SVinputInfo 1 -outputFile ./output/OUTPUT_gridss_germline.sv_tcl.annotated.tsv -genomeBuild GRCh37\n\n# number of variants (SV + SNV/indel) in the input VCF:\n#n_VCFinput=`grep -v \"^#\" ./input/INPUT_gridss_germline_output.sv.vcf | wc -l`\n# n_VCFinput => 519\n\n# number of variants in the AnnotSV output:\n#n_output=`$cut ./output/OUTPUT_gridss_germline.sv_tcl.annotated.tsv \"Annotation_mode\" | grep -c full`\n# n_output = 283\n\n# number of unnanotated SNV/indel:\n#n_nonannotated=`grep -c \"< SVminSize \" ./output/OUTPUT_gridss_germline.sv_tcl.unannotated.tsv`\n# n_nonannotated = 242\n\n#test=`expr $n_output + $n_nonannotated`\n\n\necho \"ok - Finished\"\n\n\n"
  },
  {
    "path": "tests/AnnotSV/test_18_VCFwithBrackets/input/INPUT_gridss_germline_output.sv.vcf",
    "content": 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GAGTTTATTATAAA.\t598.42\tLOW_QUAL\tAS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=104.27;BASRP=0;BASSR=4;BEID=asm254-1283;BEIDH=-1;BEIDL=0;BQ=598.42;BSC=18;BSCQ=494.15;BUM=0;BUMQ=0.00;BVF=18;CAS=0;CASQ=0.00;CQ=208.54;EVENT=gridss254_1359;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=80;REFPAIR=14;RP=0;RPQ=0.00;SB=1.0;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0\tGT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF\t.:0.00:0:0:0:0.00:0:0.00:104.27:0:4:598.42:18:494.15:0:0.00:18:0.00:0:0.00:0.00:0.00:80:14:0:0.00:0:0.00:0\n17\t41264738\tgridss254_140o\tC\tCTTCATCAGTAGGGGTTTCAAGT[17:41264766[\t1026.31\tNO_ASSEMBLY\tAS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=38;BANSRQ=970.68;BAQ=0.00;BASRP=0;BASSR=0;BQ=1699.02;BSC=78;BSCQ=1699.02;BUM=0;BUMQ=0.00;BVF=73;CAS=0;CASQ=0.00;CQ=960.01;EVENT=gridss254_140;IC=0;IHOMPOS=0,0;IQ=0.00;PARID=gridss254_140h;RAS=0;RASQ=0.00;REF=48;REFPAIR=127;RP=0;RPQ=0.00;SB=0.90677965;SC=53M1X;SR=40;SRQ=1026.31;SVTYPE=BND;VF=39\tGT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF\t.:0.00:0:0:0:0.00:38:970.68:0.00:0:0:1699.02:78:1699.02:0:0.00:73:0.00:0:0.00:1026.31:0.00:48:127:0:0.00:40:1026.31:39\n17\t41264766\tgridss254_140h\tT\t]17:41264738]TTCATCAGTAGGGGTTTCAAGTT\t1026.31\tNO_ASSEMBLY\tAS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=40;BANSRQ=1026.31;BAQ=0.00;BASRP=0;BASSR=0;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CQ=960.01;EVENT=gridss254_140;IC=0;IHOMPOS=0,0;IQ=0.00;PARID=gridss254_140o;RAS=0;RASQ=0.00;REF=203;REFPAIR=44;RP=0;RPQ=0.00;SB=0.775;SC=1X48M;SR=40;SRQ=1026.31;SVTYPE=BND;VF=39\tGT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF\t.:0.00:0:0:0:0.00:40:1026.31:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:1026.31:0.00:203:44:0:0.00:40:1026.31:39\n17\t41268209\tgridss254_3041b\tT\t.TTACTAGCACTT\t104.34\tLOW_QUAL\tAS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=52.17;BASRP=0;BASSR=3;BEID=asm254-3203;BEIDH=-1;BEIDL=11;BQ=104.34;BSC=3;BSCQ=52.17;BUM=0;BUMQ=0.00;BVF=3;CAS=0;CASQ=0.00;CQ=104.34;EVENT=gridss254_3041;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=125;REFPAIR=19;RP=0;RPQ=0.00;SB=0.0;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0\tGT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF\t.:0.00:0:0:0:0.00:0:0.00:52.17:0:3:104.34:3:52.17:0:0.00:3:0.00:0:0.00:0.00:0.00:125:19:0:0.00:0:0.00:0\n17\t41275367\tgridss254_3089b\tT\t.TTTAATAAAAAAACATTTTTTAAAAAAAGTTTTTCCAAAAAACATTCCCTTTATCCAACCCCCCACCCCCCTTT\t1333.54\tLOW_QUAL\tAS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=111.09;BASRP=0;BASSR=4;BEID=asm254-3259;BEIDH=-1;BEIDL=73;BQ=1333.54;BSC=44;BSCQ=1222.45;BUM=0;BUMQ=0.00;BVF=44;CAS=0;CASQ=0.00;CQ=904.26;EVENT=gridss254_3089;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=129;REFPAIR=40;RP=0;RPQ=0.00;SB=0.0;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0\tGT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF\t.:0.00:0:0:0:0.00:0:0.00:111.09:0:4:1333.54:44:1222.45:0:0.00:44:0.00:0:0.00:0.00:0.00:129:40:0:0.00:0:0.00:0\n17\t41275391\tgridss254_1583b\tT\tTTAAGTGGAGTTGTGCTCTTT.\t331.51\tLOW_QUAL\tAS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=114.13;BASRP=0;BASSR=6;BEID=asm254-1597;BEIDH=-1;BEIDL=0;BQ=331.51;BSC=11;BSCQ=217.38;BUM=0;BUMQ=0.00;BVF=11;CAS=0;CASQ=0.00;CQ=249.81;EVENT=gridss254_1583;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=64;REFPAIR=21;RP=0;RPQ=0.00;SB=0.9411765;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0\tGT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF\t.:0.00:0:0:0:0.00:0:0.00:114.13:0:6:331.51:11:217.38:0:0.00:11:0.00:0:0.00:0.00:0.00:64:21:0:0.00:0:0.00:0\n17\t41278006\tgridss254_3142b\tT\t.GGAGTGTT\t306.50\tLOW_QUAL\tAS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=135.40;BASRP=0;BASSR=8;BEID=asm254-3269;BEIDH=-1;BEIDL=7;BQ=306.50;BSC=10;BSCQ=171.10;BUM=0;BUMQ=0.00;BVF=10;CAS=0;CASQ=0.00;CQ=270.80;EVENT=gridss254_3142;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=312;REFPAIR=24;RP=0;RPQ=0.00;SB=0.6666667;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0\tGT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF\t.:0.00:0:0:0:0.00:0:0.00:135.40:0:8:306.50:10:171.10:0:0.00:10:0.00:0:0.00:0.00:0.00:312:24:0:0.00:0:0.00:0\n17\t41278009\tgridss254_1634b\tT\tTGTTATGT.\t457.69\tLOW_QUAL\tAS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=219.83;BASRP=0;BASSR=13;BEID=asm254-1588;BEIDH=-1;BEIDL=0;BQ=457.69;BSC=14;BSCQ=237.85;BUM=0;BUMQ=0.00;BVF=14;CAS=0;CASQ=0.00;CQ=457.69;EVENT=gridss254_1634;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=295;REFPAIR=27;RP=0;RPQ=0.00;SB=0.5925926;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0\tGT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF\t.:0.00:0:0:0:0.00:0:0.00:219.83:0:13:457.69:14:237.85:0:0.00:14:0.00:0:0.00:0.00:0.00:295:27:0:0.00:0:0.00:0\n17\t41463817\tgridss254_1662b\tA\tAGCGGAGACTAAAGATGACTAAAGAATCACGGGTGGAGCCACGCTGCT.\t413.46\tLOW_QUAL\tAS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=84.70;BASRP=0;BASSR=4;BEID=asm254-1692;BEIDH=-1;BEIDL=0;BQ=413.46;BSC=15;BSCQ=328.76;BUM=0;BUMQ=0.00;BVF=15;CAS=0;CASQ=0.00;CQ=297.48;EVENT=gridss254_1662;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=1231;REFPAIR=74;RP=0;RPQ=0.00;SB=0.2631579;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0\tGT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF\t.:0.00:0:0:0:0.00:0:0.00:84.70:0:4:413.46:15:328.76:0:0.00:15:0.00:0:0.00:0.00:0.00:1231:74:0:0.00:0:0.00:0\n17\t41463839\tgridss254_3172b\tA\t.ATGCATACA\t138.06\tLOW_QUAL\tAS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=17.34;BASRP=0;BASSR=1;BEID=asm254-3391;BEIDH=-1;BEIDL=8;BQ=138.06;BSC=6;BSCQ=120.72;BUM=0;BUMQ=0.00;BVF=6;CAS=0;CASQ=0.00;CQ=76.32;EVENT=gridss254_3172;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=1149;REFPAIR=47;RP=0;RPQ=0.00;SB=0.1;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0\tGT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF\t.:0.00:0:0:0:0.00:0:0.00:17.34:0:1:138.06:6:120.72:0:0.00:6:0.00:0:0.00:0.00:0.00:1149:47:0:0.00:0:0.00:0\n17\t41463888\tgridss254_1672b\tC\tCGTTCCGTGATCAATGGCTTATACTACCTGCACCTCAGTTTTTCCCGGGCAAAAAAGGAAGCTTGCTGCCGGTGCGTT.\t5402.58\tPASS\tAS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=2691.70;BASRP=0;BASSR=88;BEID=asm254-1691;BEIDH=-1;BEIDL=0;BQ=5402.58;BSC=89;BSCQ=2710.88;BUM=0;BUMQ=0.00;BVF=89;CAS=0;CASQ=0.00;CQ=5312.13;EVENT=gridss254_1672;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=204;REFPAIR=9;RP=0;RPQ=0.00;SB=0.12429378;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0\tGT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF\t.:0.00:0:0:0:0.00:0:0.00:2691.70:0:88:5402.58:89:2710.88:0:0.00:89:0.00:0:0.00:0.00:0.00:204:9:0:0.00:0:0.00:0\n17\t56771841\tgridss256_2815b\tT\t.TTTGAGGAAAATTTTTATTTTTTTTTTGGTGGCTAAAAAAAAGAATACTTTTTTTAAGGAAAAATT\t494.09\tLOW_QUAL\tAS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=51.38;BASRP=0;BASSR=2;BEID=asm256-2830;BEIDH=-1;BEIDL=65;BQ=494.09;BSC=16;BSCQ=442.71;BUM=0;BUMQ=0.00;BVF=16;CAS=0;CASQ=0.00;CQ=155.63;EVENT=gridss256_2815;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=111;REFPAIR=31;RP=0;RPQ=0.00;SB=0.0;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0\tGT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF\t.:0.00:0:0:0:0.00:0:0.00:51.38:0:2:494.09:16:442.71:0:0.00:16:0.00:0:0.00:0.00:0.00:111:31:0:0.00:0:0.00:0\n17\t56802321\tgridss256_48o\tT\tT[17:56802356[\t159.71\tLOW_QUAL;SINGLE_ASSEMBLY\tAS=1;ASQ=53.37;ASRP=3;ASSR=0;BA=0;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm256-351;BEIDH=2;BEIDL=0;BQ=0.00;BSC=0;BSCQ=0.00;BUM=0;BUMQ=0.00;BVF=0;CAS=0;CASQ=0.00;CIPOS=-22,22;CIRPOS=-9,9;CQ=159.71;EVENT=gridss256_48;IC=0;IMPRECISE;IQ=0.00;PARID=gridss256_48h;RAS=0;RASQ=0.00;REF=415;REFPAIR=42;RP=6;RPQ=106.34;SC=282M1X43N1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=6\tGT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF\t.:53.37:3:0:0:0.00:0:0.00:0.00:0:0:0.00:0:0.00:0:0.00:0:0.00:0:0.00:159.71:0.00:415:42:6:106.34:0:0.00:6\n17\t56802356\tgridss256_48h\tT\t]17:56802321]T\t159.71\tLOW_QUAL;SINGLE_ASSEMBLY\tAS=0;ASQ=0.00;ASRP=3;ASSR=0;BA=0;BANRP=3;BANRPQ=52.98;BANSR=0;BANSRQ=0.00;BAQ=0.00;BASRP=0;BASSR=0;BEID=asm256-351;BEIDH=0;BEIDL=2;BQ=25.12;BSC=1;BSCQ=25.12;BUM=0;BUMQ=0.00;BVF=1;CAS=0;CASQ=0.00;CIPOS=-9,9;CIRPOS=-22,22;CQ=159.71;EVENT=gridss256_48;IC=0;IMPRECISE;IQ=0.00;PARID=gridss256_48o;RAS=1;RASQ=53.37;REF=419;REFPAIR=51;RP=6;RPQ=106.34;SB=1.0;SC=1X17N1X308M;SR=0;SRQ=0.00;SVTYPE=BND;VF=6\tGT:ASQ:ASRP:ASSR:BANRP:BANRPQ:BANSR:BANSRQ:BAQ:BASRP:BASSR:BQ:BSC:BSCQ:BUM:BUMQ:BVF:CASQ:IC:IQ:QUAL:RASQ:REF:REFPAIR:RP:RPQ:SR:SRQ:VF\t.:0.00:3:0:3:52.98:0:0.00:0.00:0:0:25.12:1:25.12:0:0.00:1:0.00:0:0.00:159.71:53.37:419:51:6:106.34:0:0.00:6\n17\t56811951\tgridss256_3174b\tT\t.TTTCCCCCTTTTTTTTCCCCTTTTTTTTTAAAATTTTTGGAAAAAACTTTTCATTTTTTTTTTTTGT\t166.90\tLOW_QUAL\tAS=0;ASQ=0.00;ASRP=0;ASSR=0;BA=1;BANRP=0;BANRPQ=0.00;BANSR=0;BANSRQ=0.00;BAQ=40.00;BASRP=0;BASSR=2;BEID=asm256-3210;BEIDH=-1;BEIDL=66;BQ=166.90;BSC=4;BSCQ=126.90;BUM=0;BUMQ=0.00;BVF=4;CAS=0;CASQ=0.00;CQ=787.88;EVENT=gridss256_3174;IC=0;IQ=0.00;RAS=0;RASQ=0.00;REF=124;REFPAIR=19;RP=0;RPQ=0.00;SB=0.0;SC=1X;SR=0;SRQ=0.00;SVTYPE=BND;VF=0\tGT:ASQ:ASRP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  },
  {
    "path": "tests/AnnotSV/test_18_VCFwithBrackets/input/triplesvmerge.vcf",
    "content": "##fileformat=VCFv4.2\r\n##FILTER=<ID=gridss_ASSEMBLY_ONLY,Description=\"Variant is supported only by assembly evidence.\">\r\n##FILTER=<ID=svaba_TOOSHORT,Description=\"Contig alignment for part of this rearrangement has <= 25bp match to reference\">\r\n##INFO=<ID=brass_BAS,Number=.,Type=Integer,Description=\"Brass Assembly Score:A maximum score of 100 indicates a perfect pattern of 5 vertices in Velvet's de Bruijn graph\">\r\n##INFO=<ID=NumCallers,Number=1,Type=Integer,Description=\"Number of callers that made this call\">\r\n##INFO=<ID=END,Number=1,Type=Integer,Description=\"End position of the structural variant\">\r\n##INFO=<ID=SVTYPE,Number=1,Type=String,Description=\"Type of structural variant\">\r\n##INFO=<ID=SVLEN,Number=1,Type=String,Description=\"Length of structural variant\">\r\n##INFO=<ID=STRANDS,Number=1,Type=String,Description=\"Strand orientation of the adjacency in BEDPE format (DEL:+-, DUP:-+, INV:++/--)\">\r\n#CHROM\tPOS\tID\tREF\tALT\tQUAL\tFILTER\tINFO\tFORMAT\tsample1\tsample2\r\n1\t11099650\t.\tN\tN[1:11101794[\t.\tLOWSUPPORT\tEND=11101794;Callers=brass;NumCallers=1;CHR2=1;SVTYPE=DEL;SVLEN=2144;STRANDS=+-;brass_SVCLASS=deletion;brass_MATEID=24_1;brass_BKDIST=2143;brass_FFV=460;brass_OCC=1;brass_SID=MASP2;brass_GENE=MASP2;brass_TID=ENST00000400897;brass_AS=-1;brass_EPH=1;brass_RGN=intron;brass_RGNNO=6;brass_RGNC=11;brass_TSRDS=A00227:74:HCWC7DSXX:1:1127:3450:30765,A00227:74:HCWC7DSXX:1:1323:18222:29794,A00333:42:HCKYCDSXX:3:2629:17987:3709,A00333:42:HCKYCDSXX:4:2340:30689:21605;brass_PH=1\tbrass_PS:brass_RC\t0:0\t4:0\r\n1\t16595853\t.\tN\tN[1:16596268[\t.\tLOWSUPPORT\tEND=16596268;Callers=svaba;NumCallers=1;CHR2=1;SVTYPE=DEL;SVLEN=415;STRANDS=+-;svaba_NUMPARTS=2;svaba_MATEID=14312:1;svaba_MAPQ=60;svaba_NM=0;svaba_SCTG=c_1_16586501_16611501_18C;svaba_MATENM=0;svaba_SPAN=415;svaba_HOMSEQ=CCTCGGCCTCCCAAAGTGCTGG;svaba_EVDNC=ASSMB\tsvaba_LR:svaba_DR:svaba_SR:svaba_PL:svaba_GQ:svaba_AD:svaba_LO:svaba_DP\t11.52:0:0:0,11.4,125.4:11.4:0:0:41\t14.98:0:5:0,14.7,310.2:14.7:5:7.804:112\r\n1\t23224424\t.\tN\tN]6:91004428]\t.\tPASS\tEND=91004428;Callers=svaba,gridss,brass;NumCallers=3;CHR2=6;SVTYPE=TRA;STRANDS=++;gridss_REF=107;gridss_ASQ=1533.34;gridss_ASRP=86;gridss_ASSR=102;gridss_BANRP=0;gridss_BANRPQ=0;gridss_BANSR=0;gridss_BANSRQ=0;gridss_BAQ=0;gridss_BASRP=0;gridss_BASSR=0;gridss_BQ=307.55;gridss_BSC=12;gridss_BSCQ=183.31;gridss_BUM=4;gridss_BUMQ=124.24;gridss_BVF=4;gridss_CASQ=0;gridss_IC=0;gridss_IQ=0;gridss_RASQ=1468.82;gridss_REFPAIR=64;gridss_RP=45;gridss_RPQ=730.26;gridss_SR=41;gridss_SRQ=652.22;gridss_VF=79;gridss_AS=2;gridss_BA=0;gridss_BEID=asm115-49150,asm115-49200,asm2-42748;gridss_BEIDH=318,2,0;gridss_BEIDL=0,0,319;gridss_CAS=0;gridss_CIPOS=0,1;gridss_CIRPOS=-1,0;gridss_CQ=4352.29;gridss_EVENT=gridss2_5411;gridss_HOMLEN=1;gridss_HOMSEQ=G;gridss_IHOMPOS=0,1;gridss_PARID=gridss2_5411o;gridss_RAS=1;gridss_SB=0.483871;gridss_SC=606M2X;svaba_DISC_MAPQ=60;svaba_NUMPARTS=0;svaba_MATEID=617027:1;svaba_MAPQ=60;svaba_NM=-1;svaba_SCTG=1:23224497(+)-6:91004500(+)__6_90993001_91018001D;svaba_MATENM=-1;svaba_SPAN=-1;svaba_IMPRECISE;svaba_EVDNC=DSCRD;brass_SVCLASS=translocation;brass_MATEID=44_1;brass_BKDIST=-1;brass_FFV=200;brass_OCC=1;brass_SID=BACH2;brass_GENE=BACH2;brass_TID=ENST00000537989;brass_AS=-1;brass_EPH=1;brass_RGN=5UTRintron;brass_RGNNO=1;brass_RGNC=7;brass_TSRDS=A00227:74:HCWC7DSXX:1:1112:18747:19993,A00227:74:HCWC7DSXX:1:1122:24740:1031,A00227:74:HCWC7DSXX:1:1137:23231:35462,A00227:74:HCWC7DSXX:1:1163:16694:6292,A00227:74:HCWC7DSXX:1:1178:30590:15922,A00227:74:HCWC7DSXX:1:1218:15908:12164,A00227:74:HCWC7DSXX:1:1237:21197:17722,A00227:74:HCWC7DSXX:1:1252:29179:13291,A00227:74:HCWC7DSXX:1:1301:14118:27759,A00227:74:HCWC7DSXX:1:1304:8467:22169,A00227:74:HCWC7DSXX:1:1324:20085:21089,A00227:74:HCWC7DSXX:1:1371:27697:34272,A00227:74:HCWC7DSXX:1:2101:13919:28260,A00227:74:HCWC7DSXX:1:2106:11044:2581,A00227:74:HCWC7DSXX:1:2121:11026:21684,A00227:74:HCWC7DSXX:1:2232:15365:14857,A00227:74:HCWC7DSXX:1:2470:17933:1799,A00227:74:HCWC7DSXX:1:2502:5213:17942,A00227:74:HCWC7DSXX:1:2533:10474:22169,A00227:74:HCWC7DSXX:1:2613:26422:18035,A00227:74:HCWC7DSXX:1:2622:22661:14716,A00227:74:HCWC7DSXX:1:2644:31476:21684,A00227:74:HCWC7DSXX:1:2675:30553:1329,A00333:42:HCKYCDSXX:3:1148:21414:2566,A00333:42:HCKYCDSXX:3:1173:3314:30185,A00333:42:HCKYCDSXX:3:1510:25626:8453,A00333:42:HCKYCDSXX:3:1525:21224:4805,A00333:42:HCKYCDSXX:3:1627:14968:32800,A00333:42:HCKYCDSXX:3:2108:17363:3912,A00333:42:HCKYCDSXX:3:2146:28646:9017,A00333:42:HCKYCDSXX:3:2252:3378:27946,A00333:42:HCKYCDSXX:3:2453:5122:15436,A00333:42:HCKYCDSXX:3:2472:29441:25238,A00333:42:HCKYCDSXX:3:2525:15890:5776,A00333:42:HCKYCDSXX:3:2542:1515:14325,A00333:42:HCKYCDSXX:4:1118:11722:3599,A00333:42:HCKYCDSXX:4:1220:15781:6214,A00333:42:HCKYCDSXX:4:1303:1407:22247,A00333:42:HCKYCDSXX:4:1321:20383:36385,A00333:42:HCKYCDSXX:4:1402:8214:24862,A00333:42:HCKYCDSXX:4:1518:31042:21527,A00333:42:HCKYCDSXX:4:1544:6054:2550,A00333:42:HCKYCDSXX:4:1614:26702:18082,A00333:42:HCKYCDSXX:4:2462:27742:8234,A00333:42:HCKYCDSXX:4:2672:21386:31892\tgridss_REF:gridss_ASQ:gridss_ASRP:gridss_ASSR:gridss_BANRP:gridss_BANRPQ:gridss_BANSR:gridss_BANSRQ:gridss_BAQ:gridss_BASRP:gridss_BASSR:gridss_BQ:gridss_BSC:gridss_BSCQ:gridss_BUM:gridss_BUMQ:gridss_BVF:gridss_CASQ:gridss_IC:gridss_IQ:gridss_QUAL:gridss_RASQ:gridss_REFPAIR:gridss_RP:gridss_RPQ:gridss_SR:gridss_SRQ:gridss_VF:svaba_LR:svaba_DR:svaba_SR:svaba_PL:svaba_GQ:svaba_AD:svaba_LO:svaba_DP:brass_PS:brass_RC\t43:0:0:0:0:0:0:0:0:0:0:27.49:0:0:1:27.49:1:0:0:0:0:0:36:0:0:0:0:0:5.341:0:0:0,5.1,56.1:5.1:0:0:19:0:0\t64:1533.34:86:102:0:0:0:0:0:0:0:280.06:12:183.31:3:96.75:3:0:0:0:4384.64:1468.82:28:45:730.26:41:652.22:79:-132:43:0:132,12,0:12:43:132:34:45:0\r\n1\t23224811\t.\tN\t[1:24839407[N\t.\tPASS\tEND=24839407;Callers=svaba,gridss,brass;NumCallers=3;CHR2=1;SVTYPE=INV;SVLEN=1614596;STRANDS=--;gridss_REF=101;gridss_ASQ=1151.25;gri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:37:99.93:79\r\n5\t124052572\t.\tN\tN[5:124052931[\t.\tLOWSUPPORT\tEND=124052931;Callers=svaba;NumCallers=1;CHR2=5;SVTYPE=DEL;SVLEN=359;STRANDS=+-;svaba_NUMPARTS=2;svaba_MATEID=532955:1;svaba_MAPQ=60;svaba_NM=0;svaba_SCTG=c_5_124043501_124068501_90C;svaba_MATENM=0;svaba_SPAN=359;svaba_HOMSEQ=GGCGAATCACCTGAGGTCGGGAGTT;svaba_EVDNC=ASSMB\tsvaba_LR:svaba_DR:svaba_SR:svaba_PL:svaba_GQ:svaba_AD:svaba_LO:svaba_DP\t11.52:0:0:0,11.4,125.4:11.4:0:0:41\t23.06:0:4:0,22.8,369.6:22.8:4:5.605:129\r\n5\t164754674\t.\tN\t]5:164754798]N\t.\tLOWSUPPORT\tEND=164754798;Callers=svaba;NumCallers=1;CHR2=5;SVTYPE=DUP;SVLEN=124;STRANDS=-+;svaba_NUMPARTS=2;svaba_MATEID=552443:1;svaba_MAPQ=60;svaba_NM=0;svaba_SCTG=c_5_164738001_164763001_7C;svaba_MATENM=0;svaba_SPAN=124;svaba_EVDNC=ASSMB\tsvaba_LR:svaba_DR:svaba_SR:svaba_PL:svaba_GQ:svaba_AD:svaba_LO:svaba_DP\t13.49:0:0:0,13.2,145.2:13.2:0:0:48\t15.33:0:6:0,15,343.2:15:6:9.557:125\r\n6\t3448101\t.\tN\tN[6:3448385[\t.\tLOWSUPPORT\tEND=3448385;Callers=svaba;NumCallers=1;CHR2=6;SVTYPE=DEL;SVLEN=284;STRANDS=+-;svaba_NUMPARTS=2;svaba_MATEID=565392:1;svaba_MAPQ=60;svaba_NM=1;svaba_SCTG=c_6_3430001_3455001_42C;svaba_MATENM=0;svaba_SPAN=284;svaba_HOMSEQ=CCTCGGCCTCCCAAAGTGCTGGGATTACAGGC;svaba_EVDNC=ASSMB\tsvaba_LR:svaba_DR:svaba_SR:svaba_PL:svaba_GQ:svaba_AD:svaba_LO:svaba_DP\t9.838:0:0:0,9.6,105.6:9.6:0:0:35\t8.375:0:7:0,8.1,297:8.1:7:11.97:112\r\n6\t28919406\t.\tN\tN[6:28919683[\t.\tLOWSUPPORT\tEND=28919683;Callers=svaba;NumCallers=1;CHR2=6;SVTYPE=DEL;SVLEN=277;STRANDS=+-;svaba_NUMPARTS=2;svaba_MATEID=581667:1;svaba_MAPQ=60;svaba_NM=0;svaba_SCTG=c_6_28910001_28935001_25C;svaba_MATENM=0;svaba_SPAN=277;svaba_HOMSEQ=GTGGCTCACGCCTGTAATCCCAGCACT;svaba_EVDNC=ASSMB\tsvaba_LR:svaba_DR:svaba_SR:svaba_PL:svaba_GQ:svaba_AD:svaba_LO:svaba_DP\t13.49:0:0:0,13.2,145.2:13.2:0:0:48\t25.31:0:4:0,24.9,392.7:24.9:4:5.501:137\r\n6\t75785072\t.\tN\tN]6:84551387]\t.\tPASS\tEND=84551387;Callers=svaba,gridss,brass;NumCallers=3;CHR2=6;SVTYPE=INV;SVLEN=8766315;STRANDS=++;gridss_REF=107;gridss_ASQ=1487.36;gridss_ASRP=86;gridss_ASSR=100;gridss_BANRP=0;gridss_BANRPQ=0;gridss_BANSR=0;gridss_BANSRQ=0;gridss_BAQ=0;gridss_BASRP=0;gridss_BASSR=0;gridss_BQ=162.4;gridss_BSC=7;gridss_BSCQ=102.65;gridss_BUM=2;gridss_BUMQ=59.74;gridss_BVF=2;gridss_CASQ=0;gridss_IC=0;gridss_IQ=0;gridss_RASQ=1489.24;gridss_REFPAIR=54;gridss_RP=46;gridss_RPQ=746.49;gridss_SR=43;gridss_SRQ=686.91;gridss_VF=81;gridss_AS=1;gridss_BA=0;gridss_BEID=asm113-107185,asm114-69292;gridss_BEIDH=0,395;gridss_BEIDL=390,0;gridss_CAS=0;gridss_CQ=2920.76;gridss_EVENT=gridss113_10478;gridss_IHOMPOS=-5,0;gridss_PARID=gridss113_10478o;gridss_RAS=1;gridss_SB=0.493333;gridss_SC=151M219D399M1X;svaba_DISC_MAPQ=60;svaba_NUMPARTS=0;svaba_MATEID=614091:1;svaba_MAPQ=60;svaba_NM=-1;svaba_SCTG=6:75785100(+)-6:84551452(+)__6_84549501_84574501D;svaba_MATENM=-1;svaba_SPAN=8766352;svaba_IMPRECISE;svaba_EVDNC=DSCRD;brass_BAS=94;brass_SVCLASS=inversion;brass_MATEID=1001_1;brass_BKDIST=8766320;brass_TSRDS=A00227:74:HCWC7DSXX:1:1108:16062:11710,A00227:74:HCWC7DSXX:1:1161:29460:20635,A00227:74:HCWC7DSXX:1:1165:2700:13244,A00227:74:HCWC7DSXX:1:1201:7057:17503,A00227:74:HCWC7DSXX:1:1477:21224:34554,A00227:74:HCWC7DSXX:1:1506:15564:7936,A00227:74:HCWC7DSXX:1:1513:2926:7780,A00227:74:HCWC7DSXX:1:1515:26693:11772,A00227:74:HCWC7DSXX:1:1622:30888:15405,A00227:74:HCWC7DSXX:1:1630:19343:24627,A00227:74:HCWC7DSXX:1:1641:24912:22435,A00227:74:HCWC7DSXX:1:1662:1777:19727,A00227:74:HCWC7DSXX:1:1665:21486:17440,A00227:74:HCWC7DSXX:1:2124:10628:7122,A00227:74:HCWC7DSXX:1:2314:28429:7388,A00227:74:HCWC7DSXX:1:2316:18159:8296,A00227:74:HCWC7DSXX:1:2329:17029:21433,A00227:74:HCWC7DSXX:1:2440:26467:16266,A00227:74:HCWC7DSXX:1:2455:24035:9831,A00227:74:HCWC7DSXX:1:2463:6723:13103,A00227:74:HCWC7DSXX:1:2509:3432:22153,A00227:74:HCWC7DSXX:1:2571:4399:2409,A00227:74:HCWC7DSXX:1:2663:9010:30405,A00333:42:HCKYCDSXX:3:1113:16170:8328,A00333:42:HCKYCDSXX:3:1242:25861:3568,A00333:42:HCKYCDSXX:3:1334:30581:28338,A00333:42:HCKYCDSXX:3:1515:19370:33191,A00333:42:HCKYCDSXX:3:1603:32958:31735,A00333:42:HCKYCDSXX:3:1670:27064:30420,A00333:42:HCKYCDSXX:3:2102:11713:33520,A00333:42:HCKYCDSXX:3:2223:15953:30342,A00333:42:HCKYCDSXX:3:2369:30879:7341,A00333:42:HCKYCDSXX:3:2419:5113:12446,A00333:42:HCKYCDSXX:3:2665:10285:10410,A00333:42:HCKYCDSXX:4:1109:13440:28401,A00333:42:HCKYCDSXX:4:1172:7283:10285,A00333:42:HCKYCDSXX:4:1175:29496:1752,A00333:42:HCKYCDSXX:4:1532:29957:2362,A00333:42:HCKYCDSXX:4:1618:26350:36479,A00333:42:HCKYCDSXX:4:1653:19569:2472,A00333:42:HCKYCDSXX:4:1655:16884:1736,A00333:42:HCKYCDSXX:4:2431:2871:8437,A00333:42:HCKYCDSXX:4:2558:26350:6136,A00333:42:HCKYCDSXX:4:2610:17390:2613,A00333:42:HCKYCDSXX:4:2659:7328:10833;brass_TRDS=A00227:74:HCWC7DSXX:1:2275:24117:20055/2,A00227:74:HCWC7DSXX:1:2314:28429:7388/1,A00333:42:HCKYCDSXX:4:1418:2139:36135/1,A00227:74:HCWC7DSXX:1:1327:11704:11835/2,A00333:42:HCKYCDSXX:4:1618:26350:36479/1,A00227:74:HCWC7DSXX:1:1636:27380:19570/1,A00227:74:HCWC7DSXX:1:1335:7283:3771/1,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X:4:2403:23827:26976,A00333:42:HCKYCDSXX:4:2427:10881:8563,A00333:42:HCKYCDSXX:4:2476:25183:14293,A00333:42:HCKYCDSXX:4:2549:12762:2331;brass_TRDS=A00227:74:HCWC7DSXX:1:2341:6135:12587/2,A00333:42:HCKYCDSXX:4:1653:12933:21762/2,A00227:74:HCWC7DSXX:1:2632:25030:2284/1,A00227:74:HCWC7DSXX:1:1452:18765:4053/1,A00227:74:HCWC7DSXX:1:2104:18819:27258/1,A00227:74:HCWC7DSXX:1:1305:18466:2127/1,A00227:74:HCWC7DSXX:1:1645:32344:9471/2,A00227:74:HCWC7DSXX:1:1645:31494:8844/2,A00333:42:HCKYCDSXX:3:1161:10990:21997/2,A00227:74:HCWC7DSXX:1:2209:5113:8782/2,A00333:42:HCKYCDSXX:3:2304:27335:26913/2,A00333:42:HCKYCDSXX:3:1465:1226:21966/2,A00333:42:HCKYCDSXX:4:2549:12762:2331/1,A00227:74:HCWC7DSXX:1:1253:15790:28087/2,A00227:74:HCWC7DSXX:1:2302:14913:19429/1,A00227:74:HCWC7DSXX:1:2675:26476:22326/1,A00333:42:HCKYCDSXX:3:1538:15799:31485/2,A00227:74:HCWC7DSXX:1:2352:11794:1219/2,A00227:74:HCWC7DSXX:1:2467:20518:22028/1,A00333:42:HCKYCDSXX:3:1161:13322:25692/2,A00227:74:HCWC7DSXX:1:1468:11984:28416/2,A00227:74:HCWC7DSXX:1:2361:9498:30123/1,A00227:74:HCWC7DSXX:1:2358:4327:26490/1,A00227:74:HCWC7DSXX:1:1422:21404:26224/2,A00333:42:HCKYCDSXX:4:2403:23827:26976/1,A00227:74:HCWC7DSXX:1:2361:7907:1532/1,A00333:42:HCKYCDSXX:4:1316:15781:19460/2,A00227:74:HCWC7DSXX:1:1645:32380:9533/2,A00227:74:HCWC7DSXX:1:1314:30572:24565/1,A00227:74:HCWC7DSXX:1:2243:21965:33176/1,A00333:42:HCKYCDSXX:4:1533:7211:31234/2,A00227:74:HCWC7DSXX:1:2674:8477:19711/1,A00227:74:HCWC7DSXX:1:2606:19750:21261/2,A00333:42:HCKYCDSXX:3:1526:24587:15984/1,A00333:42:HCKYCDSXX:4:1426:12536:26553/2\tgridss_REF:gridss_ASQ:gridss_ASRP:gridss_ASSR:gridss_BANRP:gridss_BANRPQ:gridss_BANSR:gridss_BANSRQ:gridss_BAQ:gridss_BASRP:gridss_BASSR:gridss_BQ:gridss_BSC:gridss_BSCQ:gridss_BUM:gridss_BUMQ:gridss_BVF:gridss_CASQ:gridss_IC:gridss_IQ:gridss_QUAL:gridss_RASQ:gridss_REFPAIR:gridss_RP:gridss_RPQ:gridss_SR:gridss_SRQ:gridss_VF:svaba_LR:svaba_DR:svaba_SR:svaba_PL:svaba_GQ:svaba_AD:svaba_LO:svaba_DP:brass_PS:brass_RC\t50:0:0:0:0:0:0:0:0:0:0:27.49:0:0:1:27.49:1:0:0:0:0:0:25:0:0:0:0:0:6.465:0:0:0,6.3,69.3:6.3:0:0:23:0:0\t81:1614.79:102:95:2:32.46:0:0:0:0:0:177.67:9:145.42:1:32.25:0:0:0:0:4674.28:1573.68:22:53:860.09:39:625.72:84:-168.3:0:53:168.3,15.3,0:15.3:53:168.3:55:54:35\r\n9\t94474067\t.\tN\t]9:94474470]N\t.\tLOWSUPPORT\tEND=94474470;Callers=svaba;NumCallers=1;CHR2=9;SVTYPE=DUP;SVLEN=403;STRANDS=-+;svaba_DISC_MAPQ=43;svaba_NUMPARTS=0;svaba_MATEID=887447:1;svaba_MAPQ=43;svaba_NM=-1;svaba_SCTG=9:94474067(-)-9:94474470(+)__9_94472001_94497001D;svaba_MATENM=-1;svaba_SPAN=403;svaba_IMPRECISE;svaba_EVDNC=DSCRD\tsvaba_LR:svaba_DR:svaba_SR:svaba_PL:svaba_GQ:svaba_AD:svaba_LO:svaba_DP\t11.24:0:0:0,11.1,122.1:11.1:0:0:40\t-0.7566:9:0:0.8,0,258.2:0.8:9:16.75:103\r\n9\t95448575\t.\tN\tN[9:95448851[\t.\tLOWSUPPORT\tEND=95448851;Callers=svaba;NumCallers=1;CHR2=9;SVTYPE=DEL;SVLEN=276;STRANDS=+-;svaba_NUMPARTS=2;svaba_MATEID=887671:1;svaba_MAPQ=60;svaba_NM=0;svaba_SCTG=c_9_95427501_95452501_79C;svaba_MATENM=0;svaba_SPAN=276;svaba_HOMSEQ=TTGCCCAGGCTGGAGTGCAGTG;svaba_EVDNC=ASSMB\tsvaba_LR:svaba_DR:svaba_SR:svaba_PL:svaba_GQ:svaba_AD:svaba_LO:svaba_DP\t8.714:0:0:0,8.4,92.4:8.4:0:0:31\t22.21:0:4:0,21.9,359.7:21.9:4:5.646:126\r\n9\t130386811\t.\tN\tN[9:130387142[\t.\tLOWSUPPORT\tEND=130387142;Callers=svaba;NumCallers=1;CHR2=9;SVTYPE=DEL;SVLEN=331;STRANDS=+-;svaba_NUMPARTS=2;svaba_MATEID=905607:1;svaba_MAPQ=60;svaba_NM=0;svaba_SCTG=c_9_130364501_130389501_2C;svaba_MATENM=1;svaba_SPAN=331;svaba_HOMSEQ=GAACCCGGGAGGCAGAGCTTGCAGTGAG;svaba_EVDNC=ASSMB\tsvaba_LR:svaba_DR:svaba_SR:svaba_PL:svaba_GQ:svaba_AD:svaba_LO:svaba_DP\t8.714:0:0:0,8.4,92.4:8.4:0:0:31\t12.45:0:5:0,12.3,283.8:12.3:5:7.989:103\r\n9\t130626198\t.\tN\tN[9:130626602[\t.\tLOWSUPPORT\tEND=130626602;Callers=svaba;NumCallers=1;CHR2=9;SVTYPE=DEL;SVLEN=404;STRANDS=+-;svaba_NUMPARTS=2;svaba_MATEID=905583:1;svaba_MAPQ=60;svaba_NM=1;svaba_SCTG=c_9_130609501_130634501_39C;svaba_MATENM=0;svaba_SPAN=404;svaba_HOMSEQ=TGGTGGCTCACGCCTGTAATCCCAGCACTTTGG;svaba_EVDNC=ASSMB\tsvaba_LR:svaba_DR:svaba_SR:svaba_PL:svaba_GQ:svaba_AD:svaba_LO:svaba_DP\t8.714:0:0:0,8.4,92.4:8.4:0:0:31\t19.4:0:4:0,19.2,330:19.2:4:5.791:116\r\n10\t966488\t.\tN\tN[10:966953[\t.\tLOWSUPPORT\tEND=966953;Callers=svaba;NumCallers=1;CHR2=10;SVTYPE=DEL;SVLEN=465;STRANDS=+-;svaba_NUMPARTS=2;svaba_MATEID=914814:1;svaba_MAPQ=60;svaba_NM=0;svaba_SCTG=c_10_955501_980501_36C;svaba_MATENM=0;svaba_SPAN=465;svaba_HOMSEQ=CCTGTAATCCCAGCACTTTGGGAGGCCAAGGCAGGC;svaba_EVDNC=ASSMB\tsvaba_LR:svaba_DR:svaba_SR:svaba_PL:svaba_GQ:svaba_AD:svaba_LO:svaba_DP\t10.12:0:0:0,9.9,108.9:9.9:0:0:36\t19.96:0:4:0,19.8,336.6:19.8:4:5.761:118\r\n10\t11407343\t.\tN\t]10:11407680]N\t.\tLOWSUPPORT\tEND=11407680;Callers=svaba;NumCallers=1;CHR2=10;SVTYPE=DUP;SVLEN=337;STRANDS=-+;svaba_DISC_MAPQ=42;svaba_NUMPARTS=0;svaba_MATEID=922585:1;svaba_MAPQ=42;svaba_NM=-1;svaba_SCTG=10:11407343(-)-10:11407680(+)__10_11392501_11417501D;svaba_MATENM=-1;svaba_SPAN=337;svaba_IMPRECISE;svaba_EVDNC=DSCRD\tsvaba_LR:svaba_DR:svaba_SR:svaba_PL:svaba_GQ:svaba_AD:svaba_LO:svaba_DP\t12.09:0:0:0,12,132:12:0:0:43\t-3.568:9:0:3.8,0,228.2:3.8:9:17.17:93\r\n10\t13816422\t.\tN\tN[16:4038247[\t.\tLOWSUPPORT\tEND=4038247;Callers=svaba;NumCallers=1;CHR2=16;SVTYPE=TRA;STRANDS=+-;svaba_DISC_MAPQ=60;svaba_NUMPARTS=2;svaba_MATEID=924727:1;svaba_MAPQ=60;svaba_NM=0;svaba_SCTG=c_10_13793501_13818501_98C;svaba_MATENM=0;svaba_SPAN=-1;svaba_EVDNC=ASDIS\tsvaba_LR:svaba_DR:svaba_SR:svaba_PL:svaba_GQ:svaba_AD:svaba_LO:svaba_DP\t6.465:0:0:0,6.3,69.3:6.3:0:0:23\t-0.4828:3:4:0.5,0,142.4:0.5:5:9.313:57\r\n10\t20582212\t.\tN\tN[10:20616895[\t.\tPASS\tEND=20616895;Callers=svaba,brass;NumCallers=2;CHR2=10;SVTYPE=DEL;SVLEN=34683;STRANDS=+-;svaba_DISC_MAPQ=57;svaba_NUMPARTS=2;svaba_MATEID=929160:1;svaba_MAPQ=60;svaba_NM=0;svaba_SCTG=c_10_20604501_20629501_18C;svaba_MATENM=1;svaba_SPAN=34683;svaba_HOMSEQ=AAG;svaba_EVDNC=ASDIS;brass_SVCLASS=deletion;brass_MATEID=1468_1;brass_BKDIST=34682;brass_OCC=1;brass_TSRDS=A00227:74:HCWC7DSXX:1:1245:16459:7294,A00227:74:HCWC7DSXX:1:1436:28375:35070,A00227:74:HCWC7DSXX:1:1511:30789:14011,A00227:74:HCWC7DSXX:1:1601:18159:23484,A00227:74:HCWC7DSXX:1:2242:13973:24815,A00227:74:HCWC7DSXX:1:2371:19352:10113,A00227:74:HCWC7DSXX:1:2478:6036:34366,A00333:42:HCKYCDSXX:3:1173:18611:35884,A00333:42:HCKYCDSXX:3:1432:29686:27477,A00333:42:HCKYCDSXX:3:2203:5457:32174,A00333:42:HCKYCDSXX:3:2641:26078:18787,A00333:42:HCKYCDSXX:4:1320:11695:10755,A00333:42:HCKYCDSXX:4:1407:31593:3662,A00333:42:HCKYCDSXX:4:2143:27344:3067\tsvaba_LR:svaba_DR:svaba_SR:svaba_PL:svaba_GQ:svaba_AD:svaba_LO:svaba_DP:brass_PS:brass_RC\t6.465:0:0:0,6.3,69.3:6.3:0:0:23:0:0\t-161.7:28:39:161.7,14.7,0:14.7:53:161.7:50:14:0\r\n10\t37357400\t.\tN\t]16:16093639]N\t.\tLOWSUPPORT\tEND=16093639;Callers=svaba;NumCallers=1;CHR2=16;SVTYPE=TRA;STRANDS=-+;svaba_DISC_MAPQ=60;svaba_NUMPARTS=0;svaba_MATEID=1325176:1;svaba_MAPQ=60;svaba_NM=-1;svaba_SCTG=10:37357400(-)-16:16093639(+)__16_16072001_16097001D;svaba_MATENM=-1;svaba_SPAN=-1;svaba_IMPRECISE;svaba_EVDNC=DSCRD\tsvaba_LR:svaba_DR:svaba_SR:svaba_PL:svaba_GQ:svaba_AD:svaba_LO:svaba_DP\t5.622:0:0:0,5.4,59.4:5.4:0:0:20\t-15.16:8:0:15.2,0,84.5:15.2:8:17.99:40\r\n11\t639993\t.\tN\t]11:640273]N\t.\tLOWSUPPORT\tEND=640273;Callers=svaba;NumCallers=1;CHR2=11;SVTYPE=DUP;SVLEN=280;STRANDS=-+;svaba_DISC_MAPQ=17;svaba_NUMPARTS=0;svaba_MATEID=995214:1;svaba_MAPQ=17;svaba_NM=-1;svaba_SCTG=11:639993(-)-11:640273(+)__11_637001_662001D;svaba_MATENM=-1;svaba_SPAN=280;svaba_IMPRECISE;svaba_EVDNC=DSCRD\tsvaba_LR:svaba_DR:svaba_SR:svaba_PL:svaba_GQ:svaba_AD:svaba_LO:svaba_DP\t16.58:0:0:0,16.5,181.5:16.5:0:0:59\t5.637:8:0:0,5.4,297:5.4:8:14.09:114\r\n11\t26328667\t.\tN\tN[11:26328986[\t.\tLOWSUPPORT\tEND=26328986;Callers=svaba;NumCallers=1;CHR2=11;SVTYPE=DEL;SVLEN=319;STRANDS=+-;svaba_NUMPARTS=2;svaba_MATEID=1011552:1;svaba_MAPQ=60;svaba_NM=0;svaba_SCTG=c_11_26313001_26338001_93C;svaba_MATENM=0;svaba_SPAN=319;svaba_HOMSEQ=GCCTGTAATCCCAGCACTTTGGGAGGC;svaba_EVDNC=ASSMB\tsvaba_LR:svaba_DR:svaba_SR:svaba_PL:svaba_GQ:svaba_AD:svaba_LO:svaba_DP\t11.24:0:0:0,11.1,122.1:11.1:0:0:40\t23.62:0:4:0,23.4,376.2:23.4:4:5.578:131\r\n11\t61043638\t.\tN\tN[11:61043918[\t.\tLOWSUPPORT\tEND=61043918;Callers=svaba;NumCallers=1;CHR2=11;SVTYPE=DEL;SVLEN=280;STRANDS=+-;svaba_NUMPARTS=2;svaba_MATEID=1028886:1;svaba_MAPQ=60;svaba_NM=0;svaba_SCTG=c_11_61029501_61054501_50C;svaba_MATENM=0;svaba_SPAN=280;svaba_SUBN=3;svaba_HOMSEQ=GGGGGCTCATGCCTGTCATCCCAGCACTTTG;svaba_EVDNC=ASSMB\tsvaba_LR:svaba_DR:svaba_SR:svaba_PL:svaba_GQ:svaba_AD:svaba_LO:svaba_DP\t9.557:0:0:0,9.3,102.3:9.3:0:0:34\t25.02:0:4:0,24.6,389.4:24.6:4:5.513:136\r\n11\t108457190\t.\tN\tN[11:108457362[\t.\tLOWSUPPORT\tEND=108457362;Callers=svaba;NumCallers=1;CHR2=11;SVTYPE=DEL;SVLEN=172;STRANDS=+-;svaba_NUMPARTS=2;svaba_MATEID=1056636:1;svaba_MAPQ=60;svaba_NM=0;svaba_SCTG=c_11_108437001_108462001_69C;svaba_MATENM=0;svaba_SPAN=172;svaba_HOMSEQ=ATCCCCTTTCCTCCCTCCCCCATCCCCTTTCCTCCCT;svaba_EVDNC=ASSMB\tsvaba_LR:svaba_DR:svaba_SR:svaba_PL:svaba_GQ:svaba_AD:svaba_LO:svaba_DP\t4.779:0:0:0,4.5,49.5:4.5:0:0:17\t-10.53:0:6:10.7,0,70.1:10.7:6:13.21:33\r\n11\t113744620\t.\tN\tN[11:113744908[\t.\tLOWSUPPORT\tEND=113744908;Callers=svaba;NumCallers=1;CHR2=11;SVTYPE=DEL;SVLEN=288;STRANDS=+-;svaba_NUMPARTS=2;svaba_MATEID=1059133:1;svaba_MAPQ=60;svaba_NM=0;svaba_SCTG=c_11_113729001_113754001_100C;svaba_MATENM=0;svaba_SPAN=288;svaba_HOMSEQ=TCACGCCTGTAATCCCAGCACT;svaba_EVDNC=ASSMB\tsvaba_LR:svaba_DR:svaba_SR:svaba_PL:svaba_GQ:svaba_AD:svaba_LO:svaba_DP\t7.871:0:0:0,7.8,85.8:7.8:0:0:28\t18.56:0:4:0,18.3,320.1:18.3:4:5.836:113\r\n11\t122959858\t.\tN\tN[11:122960205[\t.\tLOWSUPPORT\tEND=122960205;Callers=svaba;NumCallers=1;CHR2=11;SVTYPE=DEL;SVLEN=347;STRANDS=+-;svaba_NUMPARTS=2;svaba_MATEID=1064701:1;svaba_MAPQ=60;svaba_NM=0;svaba_SCTG=c_11_122941001_122966001_85C;svaba_MATENM=0;svaba_SPAN=347;svaba_SUBN=1;svaba_HOMSEQ=GGCTCATGCCTGTAATCCCAGCACTTTGGGAGGCC;svaba_EVDNC=ASSMB\tsvaba_LR:svaba_DR:svaba_SR:svaba_PL:svaba_GQ:svaba_AD:svaba_LO:svaba_DP\t13.21:0:0:0,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svaba_MAPQ=60;svaba_NM=0;svaba_SCTG=c_12_22246001_22271001_134C;svaba_MATENM=1;svaba_SPAN=236;svaba_HOMSEQ=GGTGGCCTGCCCCTCCCTCTGGGAGCT;svaba_EVDNC=ASSMB\tsvaba_LR:svaba_DR:svaba_SR:svaba_PL:svaba_GQ:svaba_AD:svaba_LO:svaba_DP\t12.65:0:0:0,12.6,138.6:12.6:0:0:45\t56.79:0:4:0,56.5,739.3:56.5:4:4.473:249\r\n12\t34439180\t.\tN\tN[12:34439568[\t.\tLOWSUPPORT\tEND=34439568;Callers=svaba;NumCallers=1;CHR2=12;SVTYPE=DEL;SVLEN=388;STRANDS=+-;svaba_NUMPARTS=2;svaba_MATEID=1095216:1;svaba_MAPQ=60;svaba_NM=1;svaba_SCTG=c_12_34422501_34447501_36C;svaba_MATENM=0;svaba_SPAN=388;svaba_HOMSEQ=GGGAGGTAGAGACACCTGTGGAAGGAAAAAAAATGG;svaba_EVDNC=ASSMB\tsvaba_LR:svaba_DR:svaba_SR:svaba_PL:svaba_GQ:svaba_AD:svaba_LO:svaba_DP\t10.68:0:0:0,10.5,115.5:10.5:0:0:38\t39.15:0:5:0,38.8,574.3:38.8:5:6.561:198\r\n12\t34466648\t.\tN\tN[12:34466848[\t.\tLOWSUPPORT\tEND=34466848;Callers=svaba;NumCallers=1;CHR2=12;SVTYPE=DEL;SVLEN=200;STRANDS=+-;svaba_NUMPARTS=2;svaba_MATEID=1095328:1;svaba_MAPQ=60;svaba_NM=0;svaba_SCTG=c_12_34447001_34472001_58C;svaba_MATENM=1;svaba_SPAN=200;svaba_HOMSEQ=CACCGTGGGTGTGAACCAGGGATGCCAGGAT;svaba_EVDNC=ASSMB\tsvaba_LR:svaba_DR:svaba_SR:svaba_PL:svaba_GQ:svaba_AD:svaba_LO:svaba_DP\t16.58:0:0:0,16.5,181.5:16.5:0:0:59\t48.29:0:7:0,48.1,736:48.1:7:9.451:254\r\n12\t46665455\t.\tN\t]12:46677091]N\t.\tPASS\tEND=46677091;Callers=svaba,gridss,brass;NumCallers=3;CHR2=12;SVTYPE=DUP;SVLEN=11636;STRANDS=-+;gridss_REF=218;gridss_ASQ=1343.96;gridss_ASRP=81;gridss_ASSR=85;gridss_BANRP=0;gridss_BANRPQ=0;gridss_BANSR=0;gridss_BANSRQ=0;gridss_BAQ=0;gridss_BASRP=0;gridss_BASSR=0;gridss_BQ=231.77;gridss_BSC=7;gridss_BSCQ=102.77;gridss_BUM=4;gridss_BUMQ=129;gridss_BVF=3;gridss_CASQ=0;gridss_IC=0;gridss_IQ=0;gridss_RASQ=1313.21;gridss_REFPAIR=90;gridss_RP=41;gridss_RPQ=665.35;gridss_SR=38;gridss_SRQ=605.38;gridss_VF=64;gridss_AS=1;gridss_BA=0;gridss_BEID=asm200-172684,asm200-4781;gridss_BEIDH=451,596;gridss_BEIDL=0,0;gridss_CAS=0;gridss_CIPOS=0,1;gridss_CIRPOS=0,1;gridss_CQ=3911.67;gridss_EVENT=gridss200_27277;gridss_HOMLEN=1;gridss_HOMSEQ=T;gridss_IHOMPOS=0,1;gridss_PARID=gridss200_27277o;gridss_RAS=1;gridss_SB=0.507692;gridss_SC=59M1D595M2X;svaba_NUMPARTS=2;svaba_MATEID=1100510:1;svaba_MAPQ=60;svaba_NM=1;svaba_SCTG=c_12_46672501_46697501_84C;svaba_MATENM=0;svaba_SPAN=11636;svaba_HOMSEQ=T;svaba_EVDNC=ASSMB;brass_BAS=78;brass_SVCLASS=tandem-duplication;brass_MATEID=1614_1;brass_HOMSEQ=T;brass_IMPRECISE;brass_CIPOS=0,1;brass_CIEND=0,1;brass_HOMLEN=1;brass_BKDIST=11633;brass_TSRDS=A00227:74:HCWC7DSXX:1:1116:30391:27477,A00227:74:HCWC7DSXX:1:1140:21504:5134,A00227:74:HCWC7DSXX:1:1147:1696:25942,A00227:74:HCWC7DSXX:1:1231:17996:24424,A00227:74:HCWC7DSXX:1:1256:14543:6511,A00227:74:HCWC7DSXX:1:1317:13042:22075,A00227:74:HCWC7DSXX:1:1436:16215:28134,A00227:74:HCWC7DSXX:1:1447:18457:15577,A00227:74:HCWC7DSXX:1:1468:27742:33786,A00227:74:HCWC7DSXX:1:1476:24523:29340,A00227:74:HCWC7DSXX:1:1632:30689:30154,A00227:74:HCWC7DSXX:1:1637:28384:8938,A00227:74:HCWC7DSXX:1:1661:6198:13573,A00227:74:HCWC7DSXX:1:2123:17146:22858,A00227:74:HCWC7DSXX:1:2178:1904:3599,A00227:74:HCWC7DSXX:1:2342:23583:9486,A00227:74:HCWC7DSXX:1:2376:25328:21214,A00227:74:HCWC7DSXX:1:2451:20763:13056,A00227:74:HCWC7DSXX:1:2519:3025:2221,A00227:74:HCWC7DSXX:1:2523:22236:9314,A00227:74:HCWC7DSXX:1:2540:23746:7607,A00227:74:HCWC7DSXX:1:2557:32009:10614,A00227:74:HCWC7DSXX:1:2561:15420:36933,A00227:74:HCWC7DSXX:1:2612:28628:27398,A00333:42:HCKYCDSXX:3:1261:1949:25786,A00333:42:HCKYCDSXX:3:1350:10493:34194,A00333:42:HCKYCDSXX:3:1361:28818:15264,A00333:42:HCKYCDSXX:3:1449:7012:5588,A00333:42:HCKYCDSXX:3:1559:30599:29309,A00333:42:HCKYCDSXX:3:1607:19877:15405,A00333:42:HCKYCDSXX:3:1639:18792:15593,A00333:42:HCKYCDSXX:3:1653:11162:21261,A00333:42:HCKYCDSXX:3:2157:31376:26021,A00333:42:HCKYCDSXX:3:2311:20980:32409,A00333:42:HCKYCDSXX:3:2365:11207:9846,A00333:42:HCKYCDSXX:3:2368:25292:26600,A00333:42:HCKYCDSXX:3:2403:2772:7983,A00333:42:HCKYCDSXX:4:1167:27633:8484,A00333:42:HCKYCDSXX:4:2153:3694:30592,A00333:42:HCKYCDSXX:4:2376:1805:18396,A00333:42:HCKYCDSXX:4:2477:5556:32722;brass_TRDS=A00227:74:HCWC7DSXX:1:2342:23339:9283/2,A00227:74:HCWC7DSXX:1:1140:21504:5134/1,A00227:74:HCWC7DSXX:1:2342:23583:9486/2,A00333:42:HCKYCDSXX:3:1261:1949:25786/1,A00333:42:HCKYCDSXX:4:2153:3694:30592/2,A00227:74:HCWC7DSXX:1:2320:17806:34428/2,A00333:42:HCKYCDSXX:4:1167:27633:8484/2,A00227:74:HCWC7DSXX:1:1661:6198:13573/1,A00227:74:HCWC7DSXX:1:1317:13042:22075/1,A00333:42:HCKYCDSXX:4:2672:19470:23406/1,A00227:74:HCWC7DSXX:1:2330:26666:2926/2,A00333:42:HCKYCDSXX:3:1653:11162:21261/1,A00227:74:HCWC7DSXX:1:2524:5746:31610/1,A00333:42:HCKYCDSXX:3:1313:1579:5541/2,A00227:74:HCWC7DSXX:1:1231:17996:24424/2,A00333:42:HCKYCDSXX:4:2162:2085:6762/2,A00227:74:HCWC7DSXX:1:1463:2799:27195/1,A00227:74:HCWC7DSXX:1:1430:21992:5447/1,A00227:74:HCWC7DSXX:1:1468:27742:33786/2,A00227:74:HCWC7DSXX:1:2523:4670:17566/1,A00227:74:HCWC7DSXX:1:2233:11478:32800/2,A00227:74:HCWC7DSXX:1:1330:29957:5776/1,A00227:74:HCWC7DSXX:1:2519:3025:2221/2\tgridss_REF:gridss_ASQ:gridss_ASRP:gridss_ASSR:gridss_BANRP:gridss_BANRPQ:gridss_BANSR:gridss_BANSRQ:gridss_BAQ:gridss_BASRP:gridss_BASSR:gridss_BQ:gridss_BSC:gridss_BSCQ:gridss_BUM:gridss_BUMQ:gridss_BVF:gridss_CASQ:gridss_IC:gridss_IQ:gridss_QUAL:gridss_RASQ:gridss_REFPAIR:gridss_RP:gridss_RPQ:gridss_SR:gridss_SRQ:gridss_VF:svaba_LR:svaba_DR:svaba_SR:svaba_PL:svaba_GQ:svaba_AD:svaba_LO:svaba_DP:brass_PS:brass_RC\t39:0:0:0:0:0:0:0:0:0:0:0:0:0:0:0:0:0:0:0:0:0:27:0:0:0:0:0:5.341:0:0:0,5.1,56.1:5.1:0:0:19:0:0\t179:1343.96:81:85:0:0:0:0:0:0:0:231.77:7:102.77:4:129:3:0:0:0:3927.9:1313.21:63:41:665.35:38:605.38:64:-110.5:0:42:110.6,0,140.3:99:42:110.7:100:41:23\r\n12\t47021088\t.\tN\t]12:47040741]N\t.\tPASS\tEND=47040741;Callers=svaba,gridss,brass;NumCallers=3;CHR2=12;SVTYPE=DUP;SVLEN=19653;STRANDS=-+;gridss_REF=196;gridss_ASQ=1715.41;gridss_ASRP=111;gridss_ASSR=109;gridss_BANRP=0;gridss_BANRPQ=0;gridss_BANSR=0;gridss_BANSRQ=0;gridss_BAQ=0;gridss_BASRP=0;gridss_BASSR=0;gridss_BQ=151.19;gridss_BSC=8;gridss_BSCQ=118.94;gridss_BUM=1;gridss_BUMQ=32.25;gridss_BVF=1;gridss_CASQ=0;gridss_IC=0;gridss_IQ=0;gridss_RASQ=1829.83;gridss_REFPAIR=97;gridss_RP=56;gridss_RPQ=908.77;gridss_SR=44;gridss_SRQ=703.92;gridss_VF=86;gridss_AS=1;gridss_BA=0;gridss_BEID=asm200-177848,asm200-9861;gridss_BEIDH=459,332;gridss_BEIDL=0,0;gridss_CAS=0;gridss_CQ=5157.93;gridss_EVENT=gridss200_27511;gridss_IHOMPOS=0,0;gridss_PARID=gridss200_27511o;gridss_RAS=1;gridss_SB=0.509317;gridss_SC=127M6D331M1X;svaba_DISC_MAPQ=60;svaba_NUMPARTS=2;svaba_MATEID=1100616:1;svaba_MAPQ=60;svaba_NM=0;svaba_SCTG=c_12_47040001_47065001_84C;svaba_MATENM=0;svaba_SPAN=19653;svaba_EVDNC=ASDIS;brass_SVCLASS=tandem-duplication;brass_MATEID=1615_1;brass_BKDIST=19652;brass_FFV=100;brass_OCC=1;brass_SID=RP11-446N19.1;brass_GENE=RP11-446N19.1;brass_TID=ENST00000607353;brass_AS=1;brass_RGN=UTRintron;brass_RGNNO=2;brass_RGNC=3;brass_TSRDS=A00227:74:HCWC7DSXX:1:1108:29026:19225,A00227:74:HCWC7DSXX:1:1176:2817:8469,A00227:74:HCWC7DSXX:1:1207:26901:5118,A00227:74:HCWC7DSXX:1:1226:6406:3818,A00227:74:HCWC7DSXX:1:1254:31051:2065,A00227:74:HCWC7DSXX:1:1277:30789:36871,A00227:74:HCWC7DSXX:1:1302:18756:24392,A00227:74:HCWC7DSXX:1:1341:25247:1626,A00227:74:HCWC7DSXX:1:1352:32705:11350,A00227:74:HCWC7DSXX:1:1368:20862:25347,A00227:74:HCWC7DSXX:1:1402:10782:28119,A00227:74:HCWC7DSXX:1:1416:6117:25300,A00227:74:HCWC7DSXX:1:1508:17861:23531,A00227:74:HCWC7DSXX:1:1515:31367:33927,A00227:74:HCWC7DSXX:1:1568:24858:5932,A00227:74:HCWC7DSXX:1:1572:30996:7388,A00227:74:HCWC7DSXX:1:1630:29559:20870,A00227:74:HCWC7DSXX:1:1675:8721:32189,A00227:74:HCWC7DSXX:1:2130:26304:5556,A00227:74:HCWC7DSXX:1:2214:7346:8202,A00227:74:HCWC7DSXX:1:2430:27950:27038,A00227:74:HCWC7DSXX:1:2504:2880:3975,A00227:74:HCWC7DSXX:1:2673:18756:33129,A00227:74:HCWC7DSXX:1:2675:19497:2628,A00333:42:HCKYCDSXX:3:1101:16776:8312,A00333:42:HCKYCDSXX:3:1146:8422:32675,A00333:42:HCKYCDSXX:3:1501:30671:5885,A00333:42:HCKYCDSXX:3:1561:21459:8688,A00333:42:HCKYCDSXX:3:2115:20157:36245,A00333:42:HCKYCDSXX:3:2213:18295:4178,A00333:42:HCKYCDSXX:3:2217:16821:6386,A00333:42:HCKYCDSXX:3:2303:24297:23249,A00333:42:HCKYCDSXX:3:2336:1307:19539,A00333:42:HCKYCDSXX:3:2350:23285:31172,A00333:42:HCKYCDSXX:3:2369:26883:22936,A00333:42:HCKYCDSXX:3:2535:14073:16031,A00333:42:HCKYCDSXX:3:2610:4237:3818,A00333:42:HCKYCDSXX:4:1221:26585:32910,A00333:42:HCKYCDSXX:4:1412:11903:11240,A00333:42:HCKYCDSXX:4:1438:11605:4085,A00333:42:HCKYCDSXX:4:1533:7256:30780,A00333:42:HCKYCDSXX:4:1544:1805:10817,A00333:42:HCKYCDSXX:4:1613:12201:3803,A00333:42:HCKYCDSXX:4:1667:27489:32753,A00333:42:HCKYCDSXX:4:2207:2519:36699,A00333:42:HCKYCDSXX:4:2225:16758:26725,A00333:42:HCKYCDSXX:4:2263:16938:2707,A00333:42:HCKYCDSXX:4:2317:8910:3928,A00333:42:HCKYCDSXX:4:2461:14235:34851,A00333:42:HCKYCDSXX:4:2520:18186:19116,A00333:42:HCKYCDSXX:4:2525:30355:1485,A00333:42:HCKYCDSXX:4:2526:17083:32268\tgridss_REF:gridss_ASQ:gridss_ASRP:gridss_ASSR:gridss_BANRP:gridss_BANRPQ:gridss_BANSR:gridss_BANSRQ:gridss_BAQ:gridss_BASRP:gridss_BASSR:gridss_BQ:gridss_BSC:gridss_BSCQ:gridss_BUM:gridss_BUMQ:gridss_BVF:gridss_CASQ:gridss_IC:gridss_IQ:gridss_QUAL:gridss_RASQ:gridss_REFPAIR:gridss_RP:gridss_RPQ:gridss_SR:gridss_SRQ:gridss_VF:svaba_LR:svaba_DR:svaba_SR:svaba_PL:svaba_GQ:svaba_AD:svaba_LO:svaba_DP:brass_PS:brass_RC\t34:0:0:0:0:0:0:0:0:0:0:0:0:0:0:0:0:0:0:0:0:0:30:0:0:0:0:0:4.779:0:0:0,4.5,49.5:4.5:0:0:17:0:0\t162:1715.41:111:109:0:0:0:0:0:0:0:151.19:8:118.94:1:32.25:1:0:0:0:5157.93:1829.83:67:56:908.77:44:703.92:86:-177.9:4:59:175.1,0,59.6:59.6:61:177.9:94:52:0\r\n12\t49529401\t.\tN\tN[12:49529754[\t.\tLOWSUPPORT\tEND=49529754;Callers=svaba;NumCallers=1;CHR2=12;SVTYPE=DEL;SVLEN=353;STRANDS=+-;svaba_NUMPARTS=2;svaba_MATEID=1102287:1;svaba_MAPQ=60;svaba_NM=0;svaba_SCTG=c_12_49514501_49539501_119C;svaba_MATENM=1;svaba_SPAN=353;svaba_HOMSEQ=CTCAGCCTCCCAAGTAGCTGGGA;svaba_EVDNC=ASSMB\tsvaba_LR:svaba_DR:svaba_SR:svaba_PL:svaba_GQ:svaba_AD:svaba_LO:svaba_DP\t10.12:0:0:0,9.9,108.9:9.9:0:0:36\t33.74:0:4:0,33.4,485.2:33.4:4:5.158:167\r\n12\t50593966\t.\tN\tN[12:50594238[\t.\tLOWSUPPORT\tEND=50594238;Callers=svaba;NumCallers=1;CHR2=12;SVTYPE=DEL;SVLEN=272;STRANDS=+-;svaba_NUMPARTS=2;svaba_MATEID=1102720:1;svaba_MAPQ=60;svaba_NM=0;svaba_SCTG=c_12_50592501_50617501_13C;svaba_MATENM=0;svaba_SPAN=272;svaba_HOMSEQ=CCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCAC;svaba_EVDNC=ASSMB\tsvaba_LR:svaba_DR:svaba_SR:svaba_PL:svaba_GQ:svaba_AD:svaba_LO:svaba_DP\t11.52:0:0:0,11.4,125.4:11.4:0:0:41\t33.81:0:5:0,33.7,518.2:33.7:5:6.78:179\r\n12\t50996593\t.\tN\tN[12:50996884[\t.\tLOWSUPPORT\tEND=50996884;Callers=svaba;NumCallers=1;CHR2=12;SVTYPE=DEL;SVLEN=291;STRANDS=+-;svaba_NUMPARTS=2;svaba_MATEID=1103055:1;svaba_MAPQ=60;svaba_NM=0;svaba_SCTG=c_12_50984501_51009501_37C;svaba_MATENM=0;svaba_SPAN=291;svaba_HOMSEQ=TTGCAGTGAGCCGAG;svaba_EVDNC=ASSMB\tsvaba_LR:svaba_DR:svaba_SR:svaba_PL:svaba_GQ:svaba_AD:svaba_LO:svaba_DP\t10.12:0:0:0,9.9,108.9:9.9:0:0:36\t27.27:0:4:0,27.1,415.9:27.1:4:5.414:144\r\n12\t54827762\t.\tN\tN[12:54828076[\t.\tLOWSUPPORT\tEND=54828076;Callers=svaba;NumCallers=1;CHR2=12;SVTYPE=DEL;SVLEN=314;STRANDS=+-;svaba_NUMPARTS=2;svaba_MATEID=1105725:1;svaba_MAPQ=60;svaba_NM=0;svaba_SCTG=c_12_54806501_54831501_116C;svaba_MATENM=0;svaba_SPAN=314;svaba_HOMSEQ=ATCTCGGCTCACTGCAA;svaba_EVDNC=ASSMB\tsvaba_LR:svaba_DR:svaba_SR:svaba_PL:svaba_GQ:svaba_AD:svaba_LO:svaba_DP\t9.838:0:0:0,9.6,105.6:9.6:0:0:35\t32.9:0:4:0,32.8,478.6:32.8:4:5.189:164\r\n12\t69879241\t.\tN\tN[12:69879506[\t.\tLOWSUPPORT\tEND=69879506;Callers=svaba;NumCallers=1;CHR2=12;SVTYPE=DEL;SVLEN=265;STRANDS=+-;svaba_NUMPARTS=2;svaba_MATEID=1114682:1;svaba_MAPQ=60;svaba_NM=0;svaba_SCTG=c_12_69874001_69899001_45C;svaba_MATENM=0;svaba_SPAN=265;svaba_HOMSEQ=CCAAAGTGCTGGGATTACAGGC;svaba_EVDNC=ASSMB\tsvaba_LR:svaba_DR:svaba_SR:svaba_PL:svaba_GQ:svaba_AD:svaba_LO:svaba_DP\t9.276:0:0:0,9,99:9:0:0:33\t52.64:0:5:0,52.3,722.8:52.3:5:6.094:246\r\n12\t74753356\t.\tN\tN]12:74754432]\t.\tPASS\tEND=74754432;Callers=svaba,brass;NumCallers=2;CHR2=12;SVTYPE=INV;SVLEN=1076;STRANDS=++;svaba_DISC_MAPQ=60;svaba_NUMPARTS=0;svaba_MATEID=1117890:1;svaba_MAPQ=60;svaba_NM=-1;svaba_SCTG=12:74753392(+)-12:74754473(+)__12_74749501_74774501D;svaba_MATENM=-1;svaba_SPAN=1081;svaba_IMPRECISE;svaba_EVDNC=DSCRD;brass_SVCLASS=inversion;brass_MATEID=1632_1;brass_BKDIST=1069;brass_FFV=100;brass_OCC=1;brass_SID=RP11-81H3.2;brass_GENE=RP11-81H3.2;brass_TID=ENST00000551726;brass_AS=-1;brass_RGN=UTRintron;brass_RGNNO=2;brass_RGNC=6;brass_TSRDS=A00227:74:HCWC7DSXX:1:1262:31512:15671,A00227:74:HCWC7DSXX:1:1332:2040:16266,A00227:74:HCWC7DSXX:1:1440:7744:36354,A00227:74:HCWC7DSXX:1:1674:19018:7717,A00333:42:HCKYCDSXX:3:1246:20980:15969,A00333:42:HCKYCDSXX:3:1333:31991:1376,A00333:42:HCKYCDSXX:3:1527:12717:36667,A00333:42:HCKYCDSXX:3:2229:11505:9518,A00333:42:HCKYCDSXX:3:2406:31810:7733,A00333:42:HCKYCDSXX:4:1515:10511:3662,A00333:42:HCKYCDSXX:4:1543:31810:9580,A00333:42:HCKYCDSXX:4:2162:11279:34961\tsvaba_LR:svaba_DR:svaba_SR:svaba_PL:svaba_GQ:svaba_AD:svaba_LO:svaba_DP:brass_PS:brass_RC\t11.24:0:0:0,11.1,122.1:11.1:0:0:40:0:0\t3.114:12:0:0,2.8,386.1:2.8:12:21.78:152:12:0\r\n12\t93899104\t.\tN\t]12:93932084]N\t.\tPASS\tEND=93932084;Callers=svaba,gridss,brass;NumCallers=3;CHR2=12;SVTYPE=DUP;SVLEN=32980;STRANDS=-+;gridss_REF=167;gridss_ASQ=1213.62;gridss_ASRP=72;gridss_ASSR=75;gridss_BANRP=0;gridss_BANRPQ=0;gridss_BANSR=0;gridss_BANSRQ=0;gridss_BAQ=0;gridss_BASRP=0;gridss_BASSR=0;gridss_BQ=195.53;gridss_BSC=7;gridss_BSCQ=103.53;gridss_BUM=3;gridss_BUMQ=91.99;gridss_BVF=3;gridss_CASQ=32.02;gridss_IC=0;gridss_IQ=0;gridss_RASQ=1114.83;gridss_REFPAIR=77;gridss_RP=38;gridss_RPQ=616.67;gridss_SR=32;gridss_SRQ=509.65;gridss_VF=57;gridss_AS=1;gridss_BA=0;gridss_BEID=asm204-195984,asm204-82136,asm204-82245;gridss_BEIDH=463,463,229;gridss_BEIDL=0,0,2;gridss_CAS=1;gridss_CQ=3470.56;gridss_EVENT=gridss204_23492;gridss_IHOMPOS=0,0;gridss_PARID=gridss204_23492o;gridss_RAS=1;gridss_SB=0.508772;gridss_SC=462M1X;svaba_NUMPARTS=2;svaba_MATEID=1126504:1;svaba_MAPQ=60;svaba_NM=0;svaba_SCTG=c_12_93884001_93909001_64C;svaba_MATENM=0;svaba_SPAN=32980;svaba_EVDNC=ASSMB;brass_SVCLASS=tandem-duplication;brass_MATEID=1636_1;brass_BKDIST=32979;brass_OCC=1;brass_TSRDS=A00227:74:HCWC7DSXX:1:1160:3866:21652,A00227:74:HCWC7DSXX:1:1169:27579:13651,A00227:74:HCWC7DSXX:1:1229:30382:6261,A00227:74:HCWC7DSXX:1:1313:29668:29731,A00227:74:HCWC7DSXX:1:1319:19470:1924,A00227:74:HCWC7DSXX:1:1441:3992:35117,A00227:74:HCWC7DSXX:1:1452:19614:27759,A00227:74:HCWC7DSXX:1:1508:24352:12164,A00227:74:HCWC7DSXX:1:1517:19208:37043,A00227:74:HCWC7DSXX:1:1602:9679:35446,A00227:74:HCWC7DSXX:1:1664:7690:4445,A00227:74:HCWC7DSXX:1:2102:15854:13197,A00227:74:HCWC7DSXX:1:2125:5222:36902,A00227:74:HCWC7DSXX:1:2220:16071:24126,A00227:74:HCWC7DSXX:1:2222:32570:32972,A00227:74:HCWC7DSXX:1:2241:1976:7482,A00333:42:HCKYCDSXX:3:1308:3929:1282,A00333:42:HCKYCDSXX:3:1358:11189:17206,A00333:42:HCKYCDSXX:3:1474:16450:22122,A00333:42:HCKYCDSXX:3:1665:15953:5415,A00333:42:HCKYCDSX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5:2:28.75:0:0:0:0:0:0:3972.7:1318.98:28:47:762.72:35:557.88:68:-110.7:0:35:105.6,1.5,0:1.5:35:110.7:41:47:16\r\n15\t41860561\t.\tN\tN[15:41862796[\t.\tLOWSUPPORT\tEND=41862796;Callers=brass;NumCallers=1;CHR2=15;SVTYPE=DEL;SVLEN=2235;STRANDS=+-;brass_SVCLASS=deletion;brass_MATEID=1770_1;brass_BKDIST=2234;brass_FFV=680;brass_OCC=1;brass_SID=TYRO3;brass_GENE=TYRO3;brass_TID=ENST00000263798;brass_AS=1;brass_RGN=intron;brass_RGNNO=11;brass_RGNC=19;brass_TSRDS=A00227:74:HCWC7DSXX:1:2459:11288:3630,A00227:74:HCWC7DSXX:1:2619:32271:34522,A00333:42:HCKYCDSXX:3:2611:15203:19366,A00333:42:HCKYCDSXX:4:1642:28528:36652;brass_PH=1\tbrass_PS:brass_RC\t0:0\t4:0\r\n15\t52291182\t.\tN\tN[15:52291478[\t.\tLOWSUPPORT\tEND=52291478;Callers=svaba;NumCallers=1;CHR2=15;SVTYPE=DEL;SVLEN=296;STRANDS=+-;svaba_NUMPARTS=2;svaba_MATEID=1282673:1;svaba_MAPQ=60;svaba_NM=0;svaba_SCTG=c_15_52283001_52308001_34C;svaba_MATENM=1;svaba_SPAN=296;svaba_HOMSEQ=GAGCCACCGCGCCC;svaba_EVDNC=ASSMB\tsvaba_LR:svaba_DR:svaba_SR:svaba_PL:svaba_GQ:svaba_AD:svaba_LO:svaba_DP\t9.838:0:0:0,9.6,105.6:9.6:0:0:35\t13.57:0:5:0,13.2,293.7:13.2:5:7.905:107\r\n15\t52326285\t.\tN\tN[15:52326587[\t.\tLOWSUPPORT\tEND=52326587;Callers=svaba;NumCallers=1;CHR2=15;SVTYPE=DEL;SVLEN=302;STRANDS=+-;svaba_NUMPARTS=2;svaba_MATEID=1282809:1;svaba_MAPQ=60;svaba_NM=0;svaba_SCTG=c_15_52307501_52332501_4C;svaba_MATENM=0;svaba_SPAN=302;svaba_HOMSEQ=GCAACCTCTGCCTCCCGGGTTCAAGC;svaba_EVDNC=ASSMB\tsvaba_LR:svaba_DR:svaba_SR:svaba_PL:svaba_GQ:svaba_AD:svaba_LO:svaba_DP\t12.37:0:0:0,12.3,135.3:12.3:0:0:44\t18.28:0:4:0,18,316.8:18:4:5.852:112\r\n15\t64917628\t.\tN\tN[15:64917969[\t.\tLOWSUPPORT\tEND=64917969;Callers=svaba;NumCallers=1;CHR2=15;SVTYPE=DEL;SVLEN=341;STRANDS=+-;svaba_NUMPARTS=2;svaba_MATEID=1289785:1;svaba_MAPQ=60;svaba_NM=1;svaba_SCTG=c_15_64900501_64925501_27C;svaba_MATENM=0;svaba_SPAN=341;svaba_HOMSEQ=TCCCAGCTACTTGGGAGGCTGAGGCAGGA;svaba_EVDNC=ASSMB\tsvaba_LR:svaba_DR:svaba_SR:svaba_PL:svaba_GQ:svaba_AD:svaba_LO:svaba_DP\t10.68:0:0:0,10.5,115.5:10.5:0:0:38\t19.19:0:5:0,18.9,356.4:18.9:5:7.528:127\r\n15\t93785861\t.\tN\t]15:93786279]N\t.\tLOWSUPPORT\tEND=93786279;Callers=svaba;NumCallers=1;CHR2=15;SVTYPE=DUP;SVLEN=418;STRANDS=-+;svaba_DISC_MAPQ=37;svaba_NUMPARTS=0;svaba_MATEID=1306595:1;svaba_MAPQ=37;svaba_NM=-1;svaba_SCTG=15:93785861(-)-15:93786279(+)__15_93786001_93811001D;svaba_MATENM=-1;svaba_SPAN=418;svaba_IMPRECISE;svaba_EVDNC=DSCRD\tsvaba_LR:svaba_DR:svaba_SR:svaba_PL:svaba_GQ:svaba_AD:svaba_LO:svaba_DP\t4.498:0:0:0,4.2,46.2:4.2:0:0:16\t-20.43:9:0:20.6,0,60.2:20.6:9:21.63:33\r\n15\t101314488\t.\tN\tN[20:3422110[\t.\tLOWSUPPORT\tEND=3422110;Callers=svaba;NumCallers=1;CHR2=20;SVTYPE=TRA;STRANDS=+-;svaba_DISC_MAPQ=15;svaba_NUMPARTS=0;svaba_MATEID=1511760:1;svaba_MAPQ=15;svaba_NM=-1;svaba_SCTG=15:101314488(+)-20:3422110(-)__20_3405501_3430501D;svaba_MATENM=-1;svaba_SPAN=-1;svaba_IMPRECISE;svaba_EVDNC=DSCRD\tsvaba_LR:svaba_DR:svaba_SR:svaba_PL:svaba_GQ:svaba_AD:svaba_LO:svaba_DP\t7.871:0:0:0,7.8,85.8:7.8:0:0:28\t-7.856:8:0:8,0,156.5:8:8:16.09:66\r\n16\t1054898\t.\tN\tN[16:1055158[\t.\tLOWSUPPORT\tEND=1055158;Callers=svaba;NumCallers=1;CHR2=16;SVTYPE=DEL;SVLEN=260;STRANDS=+-;svaba_NUMPARTS=2;svaba_MATEID=1312976:1;svaba_MAPQ=60;svaba_NM=0;svaba_SCTG=c_16_1053501_1078501_24C;svaba_MATENM=0;svaba_SPAN=260;svaba_HOMSEQ=GAGGGAGAAGAGACGGGGGAGGGGGTAGAGATGGGGG;svaba_EVDNC=ASSMB\tsvaba_LR:svaba_DR:svaba_SR:svaba_PL:svaba_GQ:svaba_AD:svaba_LO:svaba_DP\t4.779:0:0:0,4.5,49.5:4.5:0:0:17\t-3.928:0:4:4.1,0,76.7:4.1:4:8.043:33\r\n16\t7659880\t.\tN\tN[16:7660162[\t.\tLOWSUPPORT\tEND=7660162;Callers=svaba;NumCallers=1;CHR2=16;SVTYPE=DEL;SVLEN=282;STRANDS=+-;svaba_NUMPARTS=2;svaba_MATEID=1318157:1;svaba_MAPQ=60;svaba_NM=0;svaba_SCTG=c_16_7644001_7669001_37C;svaba_MATENM=4;svaba_SPAN=282;svaba_HOMSEQ=CCCAGGCTGGAGTGCAGTGGC;svaba_EVDNC=ASSMB\tsvaba_LR:svaba_DR:svaba_SR:svaba_PL:svaba_GQ:svaba_AD:svaba_LO:svaba_DP\t11.52:0:0:0,11.4,125.4:11.4:0:0:41\t15.19:0:4:0,15,283.8:15:4:6.033:101\r\n16\t13220874\t.\tN\t]16:13221000]N\t.\tLOWSUPPORT\tEND=13221000;Callers=svaba;NumCallers=1;CHR2=16;SVTYPE=DUP;SVLEN=126;STRANDS=-+;svaba_NUMPARTS=2;svaba_MATEID=1322448:1;svaba_MAPQ=60;svaba_NM=0;svaba_SCTG=c_16_13205501_13230501_13C;svaba_MATENM=0;svaba_SPAN=126;svaba_HOMSEQ=GAGA;svaba_EVDNC=ASSMB\tsvaba_LR:svaba_DR:svaba_SR:svaba_PL:svaba_GQ:svaba_AD:svaba_LO:svaba_DP\t8.433:0:0:0,8.4,92.4:8.4:0:0:30\t-31.38:0:17:31.4,0,189.8:31.4:17:37.93:88\r\n16\t15626364\t.\tN\tN[16:15626649[\t.\tLOWSUPPORT\tEND=15626649;Callers=svaba;NumCallers=1;CHR2=16;SVTYPE=DEL;SVLEN=285;STRANDS=+-;svaba_NUMPARTS=2;svaba_MATEID=1324436:1;svaba_MAPQ=60;svaba_NM=0;svaba_SCTG=c_16_15606501_15631501_24C;svaba_MATENM=1;svaba_SPAN=285;svaba_SUBN=1;svaba_HOMSEQ=GCCTCGGCCTCCCAAAGTGTTGGGATTACAGGC;svaba_EVDNC=ASSMB\tsvaba_LR:svaba_DR:svaba_SR:svaba_PL:svaba_GQ:svaba_AD:svaba_LO:svaba_DP\t9.276:0:0:0,9,99:9:0:0:33\t21.16:0:5:0,21,379.5:21:5:7.411:134\r\n16\t26977591\t.\tN\tN[16:26977959[\t.\tLOWSUPPORT\tEND=26977959;Callers=svaba;NumCallers=1;CHR2=16;SVTYPE=DEL;SVLEN=368;STRANDS=+-;svaba_NUMPARTS=2;svaba_MATEID=1334117:1;svaba_MAPQ=60;svaba_NM=1;svaba_SCTG=c_16_26974501_26999501_31C;svaba_MATENM=0;svaba_SPAN=368;svaba_HOMSEQ=TTGCAGTGAGCCAAGATCGCGCCACT;svaba_EVDNC=ASSMB\tsvaba_LR:svaba_DR:svaba_SR:svaba_PL:svaba_GQ:svaba_AD:svaba_LO:svaba_DP\t12.37:0:0:0,12.3,135.3:12.3:0:0:44\t9.781:0:7:0,9.6,313.5:9.6:7:11.83:117\r\n16\t58694527\t.\tN\tN[16:58694816[\t.\tLOWSUPPORT\tEND=58694816;Callers=svaba;NumCallers=1;CHR2=16;SVTYPE=DEL;SVLEN=289;STRANDS=+-;svaba_NUMPARTS=2;svaba_MATEID=1347824:1;svaba_MAPQ=60;svaba_NM=2;svaba_SCTG=c_16_58677501_58702501_1C;svaba_MATENM=0;svaba_SPAN=289;svaba_HOMSEQ=CAAAGTGCTGGGATTAAAGGTGTGAGCCACTGCGCCC;svaba_EVDNC=ASSMB\tsvaba_LR:svaba_DR:svaba_SR:svaba_PL:svaba_GQ:svaba_AD:svaba_LO:svaba_DP\t11.52:0:0:0,11.4,125.4:11.4:0:0:41\t21.93:0:4:0,21.6,356.4:21.6:4:5.66:125\r\n16\t74138534\t.\tN\tN[16:74138853[\t.\tLOWSUPPORT\tEND=74138853;Callers=svaba;NumCallers=1;CHR2=16;SVTYPE=DEL;SVLEN=319;STRANDS=+-;svaba_NUMPARTS=2;svaba_MATEID=1356343:1;svaba_MAPQ=60;svaba_NM=2;svaba_SCTG=c_16_74137001_74162001_12C;svaba_MATENM=0;svaba_SPAN=319;svaba_HOMSEQ=GCCCAGGCTGGAGTGCAGTGGCA;svaba_EVDNC=ASSMB\tsvaba_LR:svaba_DR:svaba_SR:svaba_PL:svaba_GQ:svaba_AD:svaba_LO:svaba_DP\t11.24:0:0:0,11.1,122.1:11.1:0:0:40\t22.21:0:4:0,21.9,359.7:21.9:4:5.646:126\r\n16\t89389831\t.\tN\tN[16:89389988[\t.\tLOWSUPPORT\tEND=89389988;Callers=svaba;NumCallers=1;CHR2=16;SVTYPE=DEL;SVLEN=157;STRANDS=+-;svaba_NUMPARTS=2;svaba_MATEID=1366990:1;svaba_MAPQ=60;svaba_NM=0;svaba_SCTG=c_16_89376001_89401001_69C;svaba_MATENM=0;svaba_SPAN=157;svaba_HOMSEQ=AGCCCAGGGCAGGGGGGCTGAGCC;svaba_EVDNC=ASSMB\tsvaba_LR:svaba_DR:svaba_SR:svaba_PL:svaba_GQ:svaba_AD:svaba_LO:svaba_DP\t7.59:0:0:0,7.5,82.5:7.5:0:0:27\t9.846:0:4:0,9.6,224.4:9.6:4:6.4:82\r\n17\t166950\t.\tN\t]17:167298]N\t.\tLOWSUPPORT\tEND=167298;Callers=svaba;NumCallers=1;CHR2=17;SVTYPE=DUP;SVLEN=348;STRANDS=-+;svaba_DISC_MAPQ=43;svaba_NUMPARTS=0;svaba_MATEID=1368982:1;svaba_MAPQ=43;svaba_NM=-1;svaba_SCTG=17:166950(-)-17:167298(+)__17_147001_172001D;svaba_MATENM=-1;svaba_SPAN=348;svaba_IMPRECISE;svaba_EVDNC=DSCRD\tsvaba_LR:svaba_DR:svaba_SR:svaba_PL:svaba_GQ:svaba_AD:svaba_LO:svaba_DP\t10.96:0:0:0,10.8,118.8:10.8:0:0:39\t-0.1223:10:0:0.2,0,293.9:0.2:10:18.51:117\r\n17\t20370797\t.\tN\tN[17:20602212[\t.\tLOWSUPPORT\tEND=20602212;Callers=svaba;NumCallers=1;CHR2=17;SVTYPE=DEL;SVLEN=231415;STRANDS=+-;svaba_DISC_MAPQ=33;svaba_NUMPARTS=0;svaba_MATEID=1384184:1;svaba_MAPQ=33;svaba_NM=-1;svaba_SCTG=17:20370797(+)-17:20602212(-)__17_20580001_20605001D;svaba_MATENM=-1;svaba_SPAN=231415;svaba_IMPRECISE;svaba_EVDNC=DSCRD\tsvaba_LR:svaba_DR:svaba_SR:svaba_PL:svaba_GQ:svaba_AD:svaba_LO:svaba_DP\t7.027:0:0:0,6.9,75.9:6.9:0:0:25\t-21.34:12:0:21.5,0,140.3:21.5:12:26.51:65\r\n17\t29125376\t.\tN\tN[17:29125814[\t.\tLOWSUPPORT\tEND=29125814;Callers=svaba;NumCallers=1;CHR2=17;SVTYPE=DEL;SVLEN=438;STRANDS=+-;svaba_NUMPARTS=2;svaba_MATEID=1388082:1;svaba_MAPQ=60;svaba_NM=0;svaba_SCTG=c_17_29106001_29131001_80C;svaba_MATENM=0;svaba_SPAN=438;svaba_HOMSEQ=GCCACTGCACTCCAGCCTGGGCAA;svaba_EVDNC=ASSMB\tsvaba_LR:svaba_DR:svaba_SR:svaba_PL:svaba_GQ:svaba_AD:svaba_LO:svaba_DP\t12.09:0:0:0,12,132:12:0:0:43\t16.95:0:5:0,16.8,333.3:16.8:5:7.671:119\r\n17\t29166360\t.\tN\tN[17:29166633[\t.\tLOWSUPPORT\tEND=29166633;Callers=svaba;NumCallers=1;CHR2=17;SVTYPE=DEL;SVLEN=273;STRANDS=+-;svaba_NUMPARTS=2;svaba_MATEID=1387920:1;svaba_MAPQ=60;svaba_NM=1;svaba_SCTG=c_17_29155001_29180001_5C;svaba_MATENM=1;svaba_SPAN=273;svaba_HOMSEQ=TGTTGCCCAGGCTGGAGTGCA;svaba_EVDNC=ASSMB\tsvaba_LR:svaba_DR:svaba_SR:svaba_PL:svaba_GQ:svaba_AD:svaba_LO:svaba_DP\t12.37:0:0:0,12.3,135.3:12.3:0:0:44\t16.03:0:4:0,15.9,293.7:15.9:4:5.982:104\r\n17\t42774327\t.\tN\tN[17:42774716[\t.\tLOWSUPPORT\tEND=42774716;Callers=svaba;NumCallers=1;CHR2=17;SVTYPE=DEL;SVLEN=389;STRANDS=+-;svaba_NUMPARTS=2;svaba_MATEID=1396656:1;svaba_MAPQ=60;svaba_NM=0;svaba_SCTG=c_17_42752501_42777501_71C;svaba_MATENM=0;svaba_SPAN=389;svaba_HOMSEQ=TGCTGGGATTACAGGCATAAG;svaba_EVDNC=ASSMB\tsvaba_LR:svaba_DR:svaba_SR:svaba_PL:svaba_GQ:svaba_AD:svaba_LO:svaba_DP\t7.027:0:0:0,6.9,75.9:6.9:0:0:25\t12.66:0:4:0,12.3,254.1:12.3:4:6.197:92\r\n17\t47327796\t.\tN\tN[17:47328168[\t.\tLOWSUPPORT\tEND=47328168;Callers=svaba;NumCallers=1;CHR2=17;SVTYPE=DEL;SVLEN=372;STRANDS=+-;svaba_NUMPARTS=2;svaba_MATEID=1400262:1;svaba_MAPQ=60;svaba_NM=1;svaba_SCTG=c_17_47309501_47334501_90C;svaba_MATENM=0;svaba_SPAN=372;svaba_HOMSEQ=CTCACGCCTGTCATCCCAGCACTTTGGGAGGC;svaba_EVDNC=ASSMB\tsvaba_LR:svaba_DR:svaba_SR:svaba_PL:svaba_GQ:svaba_AD:svaba_LO:svaba_DP\t10.96:0:0:0,10.8,118.8:10.8:0:0:39\t15.47:0:4:0,15.3,287.1:15.3:4:6.016:102\r\n17\t74319984\t.\tN\tN[17:74320402[\t.\tLOWSUPPORT\tEND=74320402;Callers=svaba;NumCallers=1;CHR2=17;SVTYPE=DEL;SVLEN=418;STRANDS=+-;svaba_NUMPARTS=2;svaba_MATEID=1416830:1;svaba_MAPQ=60;svaba_NM=0;svaba_SCTG=c_17_74308501_74333501_90C;svaba_MATENM=0;svaba_SPAN=418;svaba_HOMSEQ=GGGCGCAGTGGCTCACGCCTGTAATCCCAGCACTTT;svaba_EVDNC=ASSM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  },
  {
    "path": "tests/AnnotSV/test_19_Mouse/command_Tcl.sh",
    "content": "#!/bin/bash -x\n\nset -eo pipefail\n\ncut=\"$ANNOTSV/tests/AnnotSV/scripts/cutWithColumnNames.tcl\"\n\nfunction exists_in_list() {\n    LIST=$1\n    DELIMITER=$2\n    VALUE=$3\n    [[ \"$LIST\" =~ ($DELIMITER|^)$VALUE($DELIMITER|$) ]]\n}\n\n\n#########################################\n# Test with Mouse annotations \n#########################################\n\nmkdir -p ./output\nrm -f \"./output/test_tcl.annotated.tsv\" \"./output/output.log\"\n$ANNOTSV/bin/AnnotSV -SVinputFile \"./input/test.bed\" -genomeBuild mm39 -SVinputInfo 1 -outputFile \"./output/test_tcl.annotated.tsv\" -svtBEDcol 4 &> \"./output/output.log\"\n\n#...output columns annotation (November 08 2021 - 13:34):\n#        AnnotSV_ID;SV_chrom;SV_start;SV_end;SV_length;SV_type;score;Annotation_mode;CytoBand;Gene_name;Gene_count;Tx;Tx_start;Tx_end;Overlapped_tx_length;Overlapped_CDS_length;Overlapped_CDS_percent;Frameshift;Exon_count;Location;Location2;Dist_nearest_SS;Nearest_SS_type;Intersect_start;Intersect_end;RE_gene;GC_content_left;GC_content_right;Repeat_coord_left;Repeat_type_left;Repeat_coord_right;Repeat_type_right\n\nif [ `grep -c \"..AnnotSV is done with the analysis\" \"./output/output.log\"` == 1 ] \nthen\n        echo \"Ok\"\nelse\n        echo \"error 1: Mouse annotation failed\"\n        exit 1\nfi\n\n\n# Cytoband annotations:\n#######################\n\n# $cut \"./output/test_tcl.annotated.tsv\" \"AnnotSV_ID;Annotation_mode;CytoBand\"\n#AnnotSV_ID      Annotation_mode CytoBand\n#1_3038297_3156351_DEL_1 full    qA1\n#1_94190001_95198035_DUP_1       full    qD\n#1_94190001_95198035_DUP_1       split   qD\n#...\n\n# list = \"CytoBand qA1 qD\"\nfor v in `$cut \"./output/test_tcl.annotated.tsv\" \"CytoBand\" | sort -u`\ndo\n        if ! exists_in_list \"CytoBand qA1 qD\" \" \" \"$v\"\n        then\n                echo \"Error with Cytoband annotations\"\n                echo \"error 1\"\n                exit 1\n        fi\ndone\n\n# Gene_name;Gene_count\n######################\n# $cut ./output/test_tcl.annotated.tsv \"AnnotSV_ID;Annotation_mode;Gene_name;Gene_count\"\n#--> La ligne full indique 31 gènes\n\n\n# Tx;Tx_start;Tx_end;Overlapped_tx_length;Overlapped_CDS_length;Overlapped_CDS_percent;Frameshift;Exon_count\n############################################################################################################\n#$cut ./output/test_tcl.annotated.tsv \"AnnotSV_ID;Annotation_mode;Tx;Tx_start;Tx_end;Overlapped_tx_length;Overlapped_CDS_length;Overlapped_CDS_percent;Frameshift;Exon_count\"\n#AnnotSV_ID      Annotation_mode Tx      Tx_start        Tx_end  Overlapped_tx_length    Overlapped_CDS_length   Overlapped_CDS_percent  Frameshift      Exon_count\n#1_3038297_3156351_DEL_1 full\n#1_94190001_95198035_DUP_1       full\n#1_94190001_95198035_DUP_1       split   NR_138578       94804954        94807341        2387    0       0       no      2\n#1_94190001_95198035_DUP_1       split   NR_015525       94830119        94847167        17048   0       0       no      2\n#1_94190001_95198035_DUP_1       split   NM_016702       95031816        95041998        10182   1245    100     no      11\n#...\n#--> 10 colonnes\n\n\n# Location;Location2;Dist_nearest_SS;Nearest_SS_type\n####################################################\n#$cut ./output/test_tcl.annotated.tsv \"AnnotSV_ID;Annotation_mode;Location;Location2;Dist_nearest_SS;Nearest_SS_type\"\n#AnnotSV_ID      Annotation_mode Location        Location2       Dist_nearest_SS Nearest_SS_type\n#1_3038297_3156351_DEL_1 full\n#1_94190001_95198035_DUP_1       full\n#1_94190001_95198035_DUP_1       split   txStart-txEnd   UTR\n#1_94190001_95198035_DUP_1       split   txStart-txEnd   UTR\n#1_94190001_95198035_DUP_1       split   txStart-txEnd   5'UTR-3'UTR\n#1_94190001_95198035_DUP_1       split   txStart-txEnd   5'UTR-3'UTR\n#...\n#1_94190001_95198035_DUP_1       split   exon4-txEnd     CDS-3'UTR       126     3'\n#...\n\n# list = \"5'UTR-3'UTR CDS-3'UTR Location2 UTR\"\nfor v in `$cut \"./output/test_tcl.annotated.tsv\" \"Location2\" | sort -u`\ndo\n        if ! exists_in_list \"5'UTR-3'UTR CDS-3'UTR Location2 UTR\" \" \" \"$v\"\n        then\n                echo \"Error with Location2 annotation\"\n                echo \"error 1\"\n                exit 1\n        fi\ndone\n\n\n# Intersect_start;Intersect_end\n###############################\n\n#$cut ./output/test_tcl.annotated.tsv \"AnnotSV_ID;Annotation_mode;Intersect_start;Intersect_end\"\n#AnnotSV_ID      Annotation_mode Intersect_start Intersect_end\n#1_3038297_3156351_DEL_1 full\n#1_94190001_95198035_DUP_1       full\n#1_94190001_95198035_DUP_1       split   94804954        94807341\n#1_94190001_95198035_DUP_1       split   94830119        94847167\n#1_94190001_95198035_DUP_1       split   95031816        95041998\n#1_94190001_95198035_DUP_1       split   94766705        94799483\n#...\n\n\n# GC content et repeat\n#######################\n\n#$cut ./output/test_tcl.annotated.tsv \"AnnotSV_ID;Annotation_mode;GC_content_left;GC_content_right;Repeat_coord_left;Repeat_type_left;Repeat_coord_right;Repeat_type_right\" | gr full\n\n#1_3038297_3156351_DEL_1 full    0.290   0.335   1:3038379-3038968       Lx4B\n#1_94190001_95198035_DUP_1       full    0.400   0.485                   1:95198045-95198078     (TCC)n\n\n\n######################################################################################################################################################\n######################################################################################################################################################\n######################################################################################################################################################\n\n# mm10/miRTargetLink_RefSeq_mm10.sorted.bed\n# 1       20679055        20679076        mTL_miRNA       Adar;Bdnf;Clcn3;Cpeb1;Eif4e3;Fn1;Fstl1;Fzd7;Gja1;Hdac4;Hhip;Hmgb3;Id1;Id2;Id3;Igsf5;Map4k3;Meox2;Mmd;Mup10;Mup11;Mup12;Mup14;Mup17;Mup19;Nfat5;Notch3;Pax3;Pax7;Pdcd10;Pim1;Pola1;Rarb;Rnf170;Sh3bgrl;Smarcb1;Smarcd2;Spry1;Tgoln1;Timp3;Utrn\n\n# test.RE.bed\n# 1       20679054        20689076        DEL\n\n\n# RE_gene\n#########\n\n#$ANNOTSV/bin/AnnotSV -SVinputFile ./input/test.RE.bed -genomeBuild mm10 -SVinputInfo 1 -outputFile ./output/test.RE_tcl.annotated.tsv -REselect1 0 -REselect2 0\n\n#$cut ./output/test.RE_tcl.annotated.tsv \"AnnotSV_ID;Annotation_mode;RE_gene\" | gr full\n#1_20679054_20689076__1  full    Acer1 (RE=mTL_miRNA);Adar (RE=mTL_miRNA);Bdnf (RE=mTL_miRNA);Clcn3 (RE=mTL_miRNA);Cpeb1 (RE=mTL_miRNA);Eif4e3 (RE=mTL_miRNA);Fn1 (RE=mTL_miRNA);Foxl2 (RE=mTL_miRNA);Fstl1 (RE=mTL_miRNA);Fzd7 (RE=mTL_miRNA);Gdf3 (RE=mTL_miRNA);Gja1 (RE=mTL_miRNA);Hdac4 (RE=mTL_miRNA);Hhip (RE=mTL_miRNA);Hmgb3 (RE=mTL_miRNA);Id1 (RE=mTL_miRNA);Id2 (RE=mTL_miRNA);Id3 (RE=mTL_miRNA);Igsf5 (RE=mTL_miRNA);Map4k3 (RE=mTL_miRNA);Meox2 (RE=mTL_miRNA);Mir133b (RE=RefSeq_promoter);Mmd (RE=mTL_miRNA);Mup10 (RE=mTL_miRNA);Mup11 (RE=mTL_miRNA);Mup12 (RE=mTL_miRNA);Mup14 (RE=mTL_miRNA);Mup17 (RE=mTL_miRNA);Mup19 (RE=mTL_miRNA);Nfat5 (RE=mTL_miRNA);Notch3 (RE=mTL_miRNA);Pax3 (RE=mTL_miRNA);Pax7 (RE=mTL_miRNA);Pdcd10 (RE=mTL_miRNA);Pim1 (RE=mTL_miRNA);Pitx3 (RE=mTL_miRNA);Pola1 (RE=mTL_miRNA);Ptbp2 (RE=mTL_miRNA);Rarb (RE=mTL_miRNA);Rnf170 (RE=mTL_miRNA);Sh3bgrl (RE=mTL_miRNA);Smarcb1 (RE=mTL_miRNA);Smarcd2 (RE=mTL_miRNA);Spry1 (RE=mTL_miRNA);Tgoln1 (RE=mTL_miRNA);Timp3 (RE=mTL_miRNA);Tnrc6b (RE=mTL_miRNA);Utrn (RE=mTL_miRNA);Zfp26 (RE=mTL_miRNA)\n\n\necho \"ok - Finished\"\n\n"
  },
  {
    "path": "tests/AnnotSV/test_19_Mouse/input/test.RE.bed",
    "content": "1\t20679054\t20689076\tDEL\n"
  },
  {
    "path": "tests/AnnotSV/test_19_Mouse/input/test.bed",
    "content": "#chrom\tstart\tend\tSV type\tscore\n1\t3038297\t3156351\tDEL\t0.025\n1\t94190001\t95198035\tDUP\t0.001\n"
  },
  {
    "path": "tests/AnnotSV/test_20_MitochondrialSV/command_Tcl.sh",
    "content": "#!/bin/bash -x\n\nset -eo pipefail\n\n\ncut=\"$ANNOTSV/tests/AnnotSV/scripts/cutWithColumnNames.tcl\"\n\n\n# Check with a bed containing 2 SV on MT chromosome\n# input/test.bed\n# M       649     1603\n# M       987     1611\n\nmkdir -p ./output\nrm -f \"./output/test_tcl.annotated.tsv\"\n$ANNOTSV/bin/AnnotSV -SVinputFile \"./input/test.bed\" -SVinputInfo 1 -outputFile \"./output/test_tcl.annotated.tsv\" -genomeBuild GRCh37\n\ntest=`$cut \"./output/test_tcl.annotated.tsv\" \"AnnotSV type\"`\n\nif [ `echo $test | grep -c \"No column to display\"` == 1 ]\nthen\n        echo \"Ok\"\nelse\n        echo \"error 1: AnnotSV should not annotate Sv on MT chromosome\"\n        exit 1\nfi\n\n\necho \"ok - Finished\"\n\n"
  },
  {
    "path": "tests/AnnotSV/test_20_MitochondrialSV/input/test.bed",
    "content": "M\t649\t1603\t\nM\t987\t1611\t\n"
  },
  {
    "path": "tests/AnnotSV/test_21_ExternalGeneAnnotationFile/command_Tcl.sh",
    "content": "#!/bin/bash -x\n\nset -eo pipefail\n\n\ncut=\"$ANNOTSV/tests/AnnotSV/scripts/cutWithColumnNames.tcl\"\n\n\n#####################################################\n## External Gene Annotation File (custom annotations)\n#####################################################\n\n\n# -> Copy \"./input/user_annotations.tsv\" dans $ANNOTSV/share/doc/AnnotSV/Annotations_Human/Users/ \n#################################################################################################\ncp \"./input/user_annotations.tsv\" $ANNOTSV/share/AnnotSV/Annotations_Human/Users/\n\n# ./input/user_annotations.tsv\n##############################\n# genes   \tdel.score       \tdup.score       \tcnv.score\n# ARHGAP19      0.163145773187885       0.339478078191488       0.339117350686952\n# PYROXD2 \t0.422491880377013       1.23836979707209        1.10456867580225\n# HPS1    \t1.07868410168786        1.32773222664126        1.53322662103495\n\n\n\n# configfile\n############\n# The external annotation colums will be added only if they are reported in the configfile\n# => Use of ./input/configfile\n\nmkdir -p ./output\nrm -f \"./output/input_tcl.annotated.tsv\" \"./output/output.log\"\n$ANNOTSV/bin/AnnotSV -SVinputFile \"./input/input.bed\" -outputFile \"./output/input_tcl.annotated.tsv\" -svtBEDcol 4 -genomeBuild GRCh37 &> \"./output/output.log\"\n#                ...user_annotations.tsv\n#                (3 gene identifiers and 3 annotations columns: del.score, dup.score, cnv.score)\n\nif [ `grep -c \"annotations columns: del.score, dup.score, cnv.score\" \"./output/output.log\"` == 1 ]\nthen\n        echo \"Ok\"\nelse\n        echo \"error 1: External annotation not used\"\n        exit 1\nfi\n\n#del.score       dup.score       cnv.score\n#0.163145773187885       0.339478078191488       0.339117350686952\n#0.163145773187885       0.339478078191488       0.339117350686952\nif [ `$cut \"./output/input_tcl.annotated.tsv\" \"del.score;dup.score;cnv.score;Gene_name\" | grep -c \"cnv.score\"`  == 1 ]\nthen\n        echo \"Ok\"\nelse\n        echo \"error 1: END coordinates for bracketed SV not good with -includeCI set to 1\"\n        exit 1\nfi\n\n\n# -> Nettoyage\n##############\nrm $ANNOTSV/share/AnnotSV/Annotations_Human/Users/user_annotations.tsv\n\n\n\necho \"ok - Finished\"\n\n"
  },
  {
    "path": "tests/AnnotSV/test_21_ExternalGeneAnnotationFile/input/configfile",
    "content": "# This file is used to simplify the configuration of AnnotSV.\n# Anything behind a hashtag is considered as a comment\n# Please, feel free to change the AnnotSV options.\n\n#------------------\n# AnnotSV Options :\n#------------------\n\n\n-genomeBuild:           GRCh37\n\n-overlap:               70\n\n-promoterSize:          500\n\n-SVinputInfo:           1\n\n-SVminSize:             50\n\n-metrics:               \"us\"\n\n-minTotalNumber:        \"500\"\n\n-overwrite:             \"1\"\n\n-reciprocal:            \"0\"\n\n-annotationMode:        \"both\"\n\n-snvindelPASS:          \"0\"\n\n\n#------------------------\n# AnnotSV Output columns:\n#------------------------\n# Output column names are listed below.\n# In order to disable default annotations provided by AnnotSV, some column names (the ones that are not marked with an *) can be commented with a hash character (\"#\") by the user.\ndel.score\ndup.score\ncnv.score\n"
  },
  {
    "path": "tests/AnnotSV/test_21_ExternalGeneAnnotationFile/input/input.bed",
    "content": "10\t98247690\t99268250\tDEL\n"
  },
  {
    "path": "tests/AnnotSV/test_21_ExternalGeneAnnotationFile/input/user_annotations.tsv",
    "content": "genes\tdel.score\tdup.score\tcnv.score\nARHGAP19\t0.163145773187885\t0.339478078191488\t0.339117350686952\nPYROXD2\t0.422491880377013\t1.23836979707209\t1.10456867580225\nHPS1\t1.07868410168786\t1.32773222664126\t1.53322662103495\n"
  },
  {
    "path": "tests/AnnotSV/test_22_knotAnnotSV_41SV/command_Tcl.sh",
    "content": "#!/bin/bash -x\n\nset -eo pipefail\n\n\ncut=\"$ANNOTSV/tests/AnnotSV/scripts/cutWithColumnNames.tcl\"\n\nfunction exists_in_list() {\n    LIST=$1\n    DELIMITER=$2\n    VALUE=$3\n    [[ \"$LIST\" =~ ($DELIMITER|^)$VALUE($DELIMITER|$) ]]\n}\n\n\n# The \"KNOTANNOTSV\" environment variable should exist\n#####################################################\n#####################################################\nif [ -z ${KNOTANNOTSV+x} ] \nthen \n\techo \"KNOTANNOTSV is unset\"\n        exit 1\n\t\nelse \n\techo \"KNOTANNOTSV is set to '$KNOTANNOTSV'\"\nfi\n\n\n# Check 1: file containing different SV types: \"test.41_SV.bed\"\n###############################################################\n###############################################################\nmkdir -p ./output\nrm -f \"./output/test.41_SV_tcl.annotated.tsv\"\n$ANNOTSV/bin/AnnotSV -SVinputFile \"./input/test.41_SV.bed\" -svtBedCol 4 -outputFile \"./output/test.41_SV_tcl.annotated.tsv\" -hpo \"HP:0001156,HP:0001363,HP:0011304,HP:0010055\" -genomeBuild GRCh37\n\nfor v in `$cut ./output/test.41_SV_tcl.annotated.tsv \"ACMG_class\" | sort -u`\ndo\n        if ! exists_in_list \"1 2 3 5 ACMG_class full=1 full=2 full=3 full=5 full=NA NA\" \" \" \"$v\"\n        then\n                echo \"Error with ./input/test.41_SV.bed\"\n                echo \"error 1\"\n                exit 1\n        fi\ndone\n\n## Creation of the tmp yaml file (\"./output/config_41_SV_AnnotSV.tmp.yaml\")\nrm -f \"./output/config_41_SV_AnnotSV.tmp.yaml\"\n$ANNOTSV/tests/AnnotSV/scripts/complete_KnotAnnotSV_YAML_test.tcl \"./output/test.41_SV_tcl.annotated.tsv\" \"$KNOTANNOTSV/config_AnnotSV.yaml\" \"./output/config_41_SV_AnnotSV.tmp.yaml\"\n\nif [ ! -f \"./output/config_41_SV_AnnotSV.tmp.yaml\" ] \nthen\n\techo \"File ./output/config_41_SV_AnnotSV.tmp.yaml does not exist\"\n        echo \"error 1\"\n        exit 1\nfi\n\n## knotAnnotSV: creation of \"./output/test.41_SV_tcl.annotated.html\"\nrm -f \"./output/test.41_SV_tcl.annotated.html\"\nperl $KNOTANNOTSV/knotAnnotSV.pl --annotSVfile \"./output/test.41_SV_tcl.annotated.tsv\" --configFile \"./output/config_41_SV_AnnotSV.tmp.yaml\" --outDir \"./output\"\n\nif [ ! -f \"./output/test.41_SV_tcl.annotated.html\" ]\nthen\n        echo \"File ./output/test.41_SV_tcl.annotated.html does not exist\"\n        echo \"error 1\"\n        exit 1\nfi\n\n\n\n\n\n# Check 2: distributed knot example\n###################################\n###################################\n\n# ./input/test.7_SV.bed <=> \"$KNOTANNOTSV/example/example.bed\"\nrm -f \"./output/test.7_SV_tcl.annotated.tsv\"\n$ANNOTSV/bin/AnnotSV -SVinputFile \"./input/test.7_SV.bed\" -svtBedCol 4 -outputFile \"./output/test.7_SV_tcl.annotated.tsv\" -hpo \"HP:0001156,HP:0001363,HP:0011304,HP:0010055\" -genomeBuild GRCh37\n\nfor v in `$cut \"./output/test.7_SV_tcl.annotated.tsv\" \"ACMG_class\" | sort -u`\ndo\n        if ! exists_in_list \"1 3 5 ACMG_class full=1 full=3 full=5 full=NA NA\" \" \" \"$v\"\n        then\n                echo \"Error with ./input/test.7_SV.bed\"\n                echo \"error 1\"\n                exit 1\n        fi\ndone\n\n## Creation of the tmp yaml file (\"./output/config_7_SV_AnnotSV.tmp.yaml\")\nrm -f \"./output/config_7_SV_AnnotSV.tmp.yaml\"\n$ANNOTSV/tests/AnnotSV/scripts/complete_KnotAnnotSV_YAML_test.tcl \"./output/test.7_SV_tcl.annotated.tsv\" \"$KNOTANNOTSV/config_AnnotSV.yaml\" \"./output/config_7_SV_AnnotSV.tmp.yaml\"\n\nif [ ! -f \"./output/config_7_SV_AnnotSV.tmp.yaml\" ]\nthen\n        echo \"File ./output/config_7_SV_AnnotSV.tmp.yaml does not exist\"\n        echo \"error 1\"\n        exit 1\nfi\n\n## knotAnnotSV: creation of \"./output/test.7_SV_tcl.annotated.html\"\nrm -f \"./output/test.7_SV_tcl.annotated.html\"\nperl $KNOTANNOTSV/knotAnnotSV.pl --annotSVfile \"./output/test.7_SV_tcl.annotated.tsv\" --configFile \"./output/config_7_SV_AnnotSV.tmp.yaml\" --outDir \"./output\"\n\nif [ ! -f \"./output/test.7_SV_tcl.annotated.html\" ]\nthen\n        echo \"File ./output/test.7_SV_tcl.annotated.html does not exist\"\n        echo \"error 1\"\n        exit 1\nfi\n\n\n\necho \"ok - Finished\"\n\n\n\n\n"
  },
  {
    "path": "tests/AnnotSV/test_22_knotAnnotSV_41SV/input/config_AnnotSV.tmp.yaml",
    "content": "##############################################################################################\n# knotAnnotSV 1.1                                                                            #\n#                                                                                            #\n# knotAnnotSV: Creation of a customizable html file to visualize, filter                     # \n#                   and analyze an AnnotSV output                                            #\n#                                                                                            #\n# Author: Thomas Guignard 2020                                                               #\n#                                                                                            #\n# Copyright (C) 2020-2021 Thomas Guignard (t-guignard@chu-montpellier.fr)                    #\n#                                                                                            #\n# This is part of knotAnnotSV source code.                                                   #\n#                                                                                            #\n# This program is free software; you can redistribute it and/or                              #\n# modify it under the terms of the GNU General Public License                                #\n# as published by the Free Software Foundation; either version 3                             #\n# of the License, or (at your option) any later version.                                     #\n#                                                                                            #\n# This program is distributed in the hope that it will be useful,                            #\n# but WITHOUT ANY WARRANTY; without even the implied warranty of                             #\n# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the                              #\n# GNU General Public License for more details.                                               #\n#                                                                                            #\n# You should have received a copy of the GNU General Public License                          #\n# along with this program; If not, see <http://www.gnu.org/licenses/>.                       #\n##############################################################################################\n---\n#### General annotations on the SV\n##################################\nAnnotSV_ID:    #mandatory in first position\n    POSITION: 1\n    RENAME: \"AnnotSV ID\"\nACMG_class:  # mandatory   \n    POSITION: 2\n    RENAME: \"ACMG class\"\n    HEADERTIPS: \"SV ranking class (from 1 to 5) following the 2020 joint consensus recommendation of ACMG and ClinGen\"\n    COMMENTLIST:\n        - AnnotSV_ranking_score\n        - AnnotSV_ranking_criteria\nSV_type:\n    POSITION: 3\n    RENAME: \"SV type\"\n    HEADERTIPS: \"Type of the SV (DEL, DUP...)\"\n    COMMENTLIST:\n        - SV_length\n        - Gene_count\n\nAnnotation_mode: #mandatory\n    POSITION: 4 \n    RENAME: \"Annotation mode\"\n    HEADERTIPS: \"Type of annotation lines generated:<br>\n- annotation on the SV full length (full)<br>\n- annotation on each gene overlapped by the SV (split)\"\n\n### Gene annotations\n####################\nGene_name:     # mandatory\n    POSITION: 5\n    RENAME: \"Gene name\"\n    HEADERTIPS: \"Gene symbol\"\n    COMMENTLIST:\n        - LOEUF_bin\n        - GnomAD_pLI\n        - ExAC_pLI\n        - HI\n        - TS\n        - DDD_HI_percent\n        - ACMG\n        - ExAC_cnvZ\n        - ExAC_delZ\n        - ExAC_dupZ\n        - ExAC_synZ\n        - ExAC_misZ\n        - DDD_status\n        - DDD_mode\n        - DDD_consequence\n        - DDD_disease\n        - DDD_pmid\n        - GenCC_disease\n        - GenCC_moi\n        - GenCC_classification\n        - GenCC_pmid\nLocation:\n    POSITION: 6\n    RENAME: \"Location\"\n    HEADERTIPS: \"Hover your mouse to highlight SV location annotations in the gene\"\n    COMMENTLIST:\n        - CytoBand\n        - Location2\n        - Tx\n        - Tx_start\n        - Tx_end\n        - Exon_count\n        - Overlapped_tx_length\n        - Overlapped_CDS_length\n        - Overlapped_CDS_percent\n        - Frameshift\n        - Dist_nearest_SS\n        - Nearest_SS_type\n        - Intersect_start\n        - Intersect_end\nOMIM_ID:\n    POSITION: 7\n    RENAME: \"OMIM ID\"\n    HEADERTIPS: \"Hover your mouse to highlight OMIM annotations\"\n    COMMENTLIST:\n        - OMIM_phenotype\n        - OMIM_inheritance\n        - OMIM_morbid\n        - OMIM_morbid_candidate\nExomiser_gene_pheno_score:\n    POSITION: 8\n    RENAME: \"Exomiser score\"\n    HEADERTIPS: \"Show how close each overlapped gene is to the patient phenotype<br>\n    Highly specific and consistent phenotype: score > 0.7<br>\n    Consistent phenotype: score > 0.5\"\n    COMMENTLIST:\n        - Human_pheno_evidence\n        - Mouse_pheno_evidence\n        - Fish_pheno_evidence\n\n### Annotations done with regulatory elements\n#############################################\nRE_gene:\n    POSITION: 9\n    RENAME: \"Overlapped regulatory elements\"\n    HEADERTIPS: \"Report the name of the genes potentially badly regulated\"\n\n### Annotations done with pathogenic SV\n#######################################\nP_gain_coord:\n    POSITION: 10\n    RENAME: \"Pathogenic SV\"\n    HEADERTIPS: \"Known pathogenic genes or genomic regions (with the same SV type; from ClinVar, ClinGen, dbVar, OMIM) completely overlapped with the SV to annotate\"\n    COMMENTLIST:\n        - P_gain_source\n        - P_gain_phen\n        - P_gain_hpo\n        - P_loss_coord\n        - P_loss_source\n        - P_loss_phen\n        - P_loss_hpo\n\n### Annotations done with pathogenic snv/indel\n##############################################\nP_snvindel_nb:\n    POSITION: 11\n    RENAME: \"Number of pathogenic SNV/indel overlapped\"\n    HEADERTIPS: \"Pathogenic SNV/indel (from ClinVar) completely overlapped with the SV to annotate\"\n    COMMENTLIST:\n        - P_snvindel_phen\n\n### Annotations done with benign SV\n###################################\nB_gain_source:\n    POSITION: 12\n    RENAME: \"Benign SV\"\n    HEADERTIPS: \"Benign genomic regions (with the same SV type; from gnomAD, ClinVar, ClinGen, DGV, DDD, 1000g, IMH) completely overlapping the SV to annotate\"\n    COMMENTLIST:\n        - B_gain_coord\n        - B_gain_AFmax\n        - B_loss_source\n        - B_loss_coord\n        - B_loss_AFmax\n\n### Annotations of the breakpoints\n##################################\nENCODE_blacklist_characteristics_left:\n    POSITION: 13\n    RENAME: \"Left breakpoint annotations\"\n    HEADERTIPS: \"Hover your mouse to highlight the left SV breakpoint (+/- 100bp) annotations\"\n    COMMENTLIST:\n        - ENCODE_blacklist_left\n        - SegDup_left\n        - Repeat_coord_left\n        - Repeat_type_left\n        - Gap_left\n        - GC_content_left\n\nENCODE_blacklist_characteristics_right:\n    POSITION: 14\n    RENAME: \"Right breakpoint annotations\"\n    HEADERTIPS: \"Hover your mouse to highlight the right SV breakpoint (+/- 100bp) annotations\"\n    COMMENTLIST:\n        - ENCODE_blacklist_right\n        - SegDup_right\n        - Repeat_coord_right\n        - Repeat_type_right\n        - Gap_right\n        - GC_content_right\n\nTAD_coordinate:\n    POSITION: 0\nENCODE_experiment:\n    POSITION: 0\nCosmic_ID:\n    POSITION: 0\nCosmic_mut_typ:\n    POSITION: 0\ncompound-htz(sample):\n    POSITION: 0\nCount_hom(sample):\n    POSITION: 0\nCount_htz(sample):\n    POSITION: 0\nCount_htz/allHom(sample):\n    POSITION: 0\nCount_htz/total(cohort):\n    POSITION: 0\nCount_total(cohort):\n    POSITION: 0\n\n\nBiologist_annotation: # additional user column\n    POSITION: 15\n\nBiologist_ranking: # additional user column\n    POSITION: 16\n\n"
  },
  {
    "path": "tests/AnnotSV/test_22_knotAnnotSV_41SV/input/test.41_SV.bed",
    "content": "# chrom\tStart\tEnd\tVariant_type\tBiologist_annotation\tBiologist_ranking\r\n1\t149041933\t149209289\tDEL\t\tBenign\r\n1\t196756231\t196799302\tDEL\t\tBenign\r\n1\t248738898\t248785562\tDEL\t\tBenign\r\n2\t242865920\t243028452\tDEL\t\tBenign\r\n3\t62939217\t65268743\tDEL\tVOUS in 2017, reclassified in 2020\tPathogenic\r\n3\t97483033\t97487074\tDEL\tBBS3/ARL6 promotor overlapped\tPathogenic\r\n3\t195419168\t195472855\tDEL\t\tBenign\r\n4\t71552\t9371067\tDEL\t4p- syndrom\tPathogenic\r\n4\t69392545\t69462438\tDEL\t\tBenign\r\n5\t723194\t777000\tDUP\t\tBenign\r\n5\t88774328\t91802402\tDEL\tTAD MEF2C\tPathogenic\r\n6\t266079\t362290\tDEL\t\tBenign\r\n6\t29854870\t29896710\tDEL\t\tBenign\r\n6\t78979172\t79023328\tDEL\t\tBenign\r\n7\t33397467\t33397607\tDEL\tBBS9 inframe\tPathogenic\r\n7\t38296176\t38352444\tDEL\t\tBenign\r\n7\t72726578\t74139390\tDEL\tWilliams syndrom\tPathogenic\r\n8\t7169490\t7753583\tDUP\t\tBenign\r\n8\t7169490\t7753583\tDEL\t\tBenign\r\n8\t56986129\t57169684\tDEL\tVOUS in 2017, reclassified in 2020\tPathogenic\r\n8\t141035363\t141061798\tDEL\tDI AR\tPathogenic\r\n10\t46976157\t47590995\tDUP\t\tBenign\r\n11\t66287088\t66288847\tDEL\tBBS1 internal frameshift\tPathogenic\r\n12\t63935481\t64130626\tDEL\tDPY19L2 (both DEL and DUP LCR mediated, precise breakpoints)\tPathogenic\r\n12\t63935481\t64130626\tDUP\tDPY19L2 (both DEL and DUP LCR mediated, precise breakpoints)\tPathogenic\r\n14\t22323879\t22952279\tDEL\t\tBenign\r\n14\t74001651\t74022324\tDEL\t\tBenign\r\n14\t107152092\t107180095\tDEL\t\tBenign\r\n15\t20432851\t22765687\tDUP\t\tBenign\r\n15\t20564608\t22409391\tDEL\t\tBenign\r\n15\t34735949\t34806953\tDEL\t\tBenign\r\n16\t1565629\t1571297\tDUP\tIFT140 tandem duplication \tPathogenic\r\n16\t31955076\t34702366\tDUP\t\tBenign\r\n16\t32471625\t33487672\tDEL\t\tBenign\r\n16\t33371443\t34285848\tDUP\t\tBenign\r\n16\t34493206\t34702366\tDUP\t\tBenign\r\n17\t14100118\t15442066\tDUP\tPMP22 (CMT1A)\tPathogenic\r\n17\t34437475\t34817481\tDUP\t\tBenign\r\n17\t44171888\t44297143\tDUP\t\tBenign\r\n22\t18894835\t21464119\tDEL\tDi George syndrom\tPathogenic\r\nX\t53250653\t53856257\tDUP\tHUWE1\tPathogenic\r\n"
  },
  {
    "path": "tests/AnnotSV/test_22_knotAnnotSV_41SV/input/test.7_SV.bed",
    "content": "# chrom\tStart\tEnd\tVariant_type\tBiologist_annotation\tBiologist_ranking\r\n1\t149041933\t149209289\tDEL\t\tBenign\r\n4\t71552\t9371067\tDEL\t4p- syndrom\tPathogenic\r\n5\t723194\t777000\tDUP\t\tBenign\r\n11\t66287088\t66288847\tDEL\tBBS1 internal frameshift\tPathogenic\r\n15\t34735949\t34806953\tDEL\t\tBenign\r\n16\t1565629\t1571297\tDUP\tIFT140 tandem duplication \tPathogenic\r\nX\t53250653\t53856257\tDUP\tHUWE1\tPathogenic\r\n"
  },
  {
    "path": "tests/AnnotSV/test_23_Exomiser/command_Tcl.sh",
    "content": "#!/bin/bash -x\n\nset -eo pipefail\n\n\ncut=\"$ANNOTSV/tests/AnnotSV/scripts/cutWithColumnNames.tcl\"\n\n\n\n####################################\n# Checking of Exomiser\n####################################\n\n\n# Test with 1 SV:\n#################\n\n# HPO terms = HP:0001156,HP:0001363,HP:0011304,HP:0010055\n# Gene positively scored with these HPO = FGFR2 (Entrez Gene: 2263)\n\n# GRCh37:\nmkdir -p ./output\nrm -f \"./output/GRCh37-1SV_tcl.annotated.tsv\"\n$ANNOTSV/bin/AnnotSV -SVinputFile \"./input/GRCh37-1SV.vcf\" -outputFile \"./output/GRCh37-1SV_tcl.annotated.tsv\" -genomeBuild GRCh37 -hpo \"HP:0001156,HP:0001363,HP:0011304,HP:0010055\"\n\nannotations=`$cut \"./output/GRCh37-1SV_tcl.annotated.tsv\" \"Annotation_mode;Gene_name;Exomiser_gene_pheno_score;Human_pheno_evidence;Mouse_pheno_evidence;Fish_pheno_evidence\"`\n# Annotation_mode Gene_name       Exomiser_gene_pheno_score       Human_pheno_evidence    Mouse_pheno_evidence    Fish_pheno_evidence\n# full    FGFR2;WDR11;WDR11-AS1   1.0000\n#split   FGFR2   1.0000  Brachydactyly;Broad hallux;Broad metatarsal;Broad thumb;Craniosynostosis;Jackson-Weiss syndrome Brachydactyly;Broad hallux;Broad thumb;Craniosynostosis;abnormal sternum morphology;premature cranial suture closure\n# split   WDR11   0.6748  Broad hallux;Kallmann syndrome;Pes cavus        Brachydactyly;Broad hallux;Broad thumb;Craniosynostosis;decreased bone mineralization;syndactyly\n# split   WDR11-AS1       0.0000\n\nif [ `echo $annotations | grep -c \"Craniosynostosis\"` == 1 ]\nthen\n        echo \"Ok\"\nelse\n        echo \"error 1: Exomiser does not work (GRCh37-1SV)\"\n        exit 1\nfi\n\n\n# GRCh38:\n# => Exomiser annote les gènes (build independant), on doit avoir exactement le même résultat\nrm -f \"./output/GRCh38-1SV_tcl.annotated.tsv\"\n$ANNOTSV/bin/AnnotSV -SVinputFile \"./input/GRCh38-1SV.vcf\" -outputFile \"./output/GRCh38-1SV_tcl.annotated.tsv\" -genomeBuild GRCh38 -hpo \"HP:0001156,HP:0001363,HP:0011304,HP:0010055\"\n\nannotations=`$cut \"./output/GRCh38-1SV_tcl.annotated.tsv\" \"Annotation_mode;Gene_name;Exomiser_gene_pheno_score;Human_pheno_evidence;Mouse_pheno_evidence;Fish_pheno_evidence\"`\nif [ `echo $annotations | grep -c \"Craniosynostosis\"` == 1 ]\nthen\n        echo \"Ok\"\nelse\n        echo \"error 1: Exomiser does not work (GRCh38-1SV)\"\n        exit 1\nfi\n\n\n# Test with > 6000 SV:\n######################\n\n# GRCh37:\n# Timing: 20 min\nrm -f \"./output/GRCh37-multi_tcl.annotated.tsv\"\n$ANNOTSV/bin/AnnotSV -SVinputFile \"./input/GRCh37-multiSV.vcf\" -outputFile \"./output/GRCh37-multi_tcl.annotated.tsv\" -genomeBuild GRCh37 -hpo \"HP:0001156,HP:0001363,HP:0011304,HP:0010055\"\n\nannotations=`$cut \"./output/GRCh37-multi_tcl.annotated.tsv\" \"Annotation_mode;Gene_name;Exomiser_gene_pheno_score;Human_pheno_evidence;Mouse_pheno_evidence;Fish_pheno_evidence\" | grep PRDM16`\nif [ `echo $annotations | grep -c \"Craniosynostosis\"` == 1 ]\nthen\n        echo \"Ok\"\nelse\n        echo \"error 1: Exomiser does not work (GRCh37-multiSV)\"\n        exit 1\nfi\n\n\n# GRCh38:\n# => Exomiser annote les gènes (build independant), on doit avoir exactement le même résultat\n# Timing: 20 min\nrm -f \"./output/GRCh38-multi_tcl.annotated.tsv\"\n$ANNOTSV/bin/AnnotSV -SVinputFile \"./input/GRCh38-multiSV.vcf\" -outputFile \"./output/GRCh38-multi_tcl.annotated.tsv\" -genomeBuild GRCh38 -hpo \"HP:0001156,HP:0001363,HP:0011304,HP:0010055\"\n\nannotations=`$cut \"./output/GRCh38-multi_tcl.annotated.tsv\" \"Annotation_mode;Gene_name;Exomiser_gene_pheno_score;Human_pheno_evidence;Mouse_pheno_evidence;Fish_pheno_evidence\" | grep PRDM16`\nif [ `echo $annotations | grep -c \"Craniosynostosis\"` == 1 ]\nthen\n        echo \"Ok\"\nelse\n        echo \"error 1: Exomiser does not work (GRCh38-multiSV)\"\n        exit 1\nfi\n\n\n\n\necho \"ok - Finished\"\n\n\n\n"
  },
  {
    "path": "tests/AnnotSV/test_23_Exomiser/input/GRCh37-1SV.vcf",
    "content": "##fileformat=VCFv4.2\n#CHROM\tPOS\tID\tREF\tALT\tQUAL\tFILTER\tINFO\tFORMAT\tsample1\n10\t123237900\t569156:2\tA\t]10:122457304]C\t72\tPASS\tEVDNC=ASSMB;INSERTION=TTATTAATTAATTAACTAAAATTAAATTATTTAGTTAATTTAATTAACTAAACT;MAPQ=60;MATEID=569156:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_122451001_122476001_97C;SPAN=444;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:24:17:6.6:72.6,6.6,0:24:0:-72.62:72.62\n"
  },
  {
    "path": "tests/AnnotSV/test_23_Exomiser/input/GRCh37-multiSV.vcf",
    "content": "##fileformat=VCFv4.2\n#CHROM\tPOS\tID\tREF\tALT\tQUAL\tFILTER\tINFO\tFORMAT\tsample1\n1\t1477855\t389:1\tG\t]1:1477984]G\t37\tPASS\tEVDNC=ASSMB;INSERTION=TGT;MAPQ=60;MATEID=389:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_1_1470001_1495001_12C;SPAN=129;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:33:37.1:37.1,0,43.7:14:0:-36.94:36.99\n1\t1477984\t389:2\tA\tA[1:1477855[\t37\tPASS\tEVDNC=ASSMB;INSERTION=TGT;MAPQ=60;MATEID=389:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_1_1470001_1495001_12C;SPAN=129;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:33:37.1:37.1,0,43.7:14:0:-36.94:36.99\n1\t1934936\t523:1\tT\tT[1:1935574[\t49\tPASS\tDISC_MAPQ=46;EVDNC=ASDIS;HOMSEQ=GTGTTAGGTTGTAGGTACACAGGT;MAPQ=60;MATEID=523:2;MATENM=3;NM=0;NUMPARTS=2;SCTG=c_1_1911001_1936001_35C;SPAN=638;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:17:7:4.5:49.5,4.5,0:16:4:-49.51:49.51\n1\t1935574\t523:2\tG\t]1:1934936]G\t49\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=GTGTTAGGTTGTAGGTACACAGGT;MAPQ=60;MATEID=523:1;MATENM=0;NM=3;NUMPARTS=2;SCTG=c_1_1911001_1936001_35C;SPAN=638;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:17:7:4.5:49.5,4.5,0:16:4:-49.51:49.51\n1\t3176048\t1705:1\tC\t]1:3176290]C\t16\tPASS\tEVDNC=ASSMB;HOMSEQ=CATCCATCCATCCATCCATCCATC;MAPQ=60;MATEID=1705:2;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_1_3160501_3185501_4C;SPAN=242;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:7:23:16.7:16.7,0,39.8:7:0:-16.64:17.22\n1\t3176290\t1705:2\tC\tC[1:3176048[\t16\tPASS\tEVDNC=ASSMB;HOMSEQ=CATCCATCCATCCATCCATCCATC;MAPQ=60;MATEID=1705:1;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_1_3160501_3185501_4C;SPAN=242;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:7:23:16.7:16.7,0,39.8:7:0:-16.64:17.22\n1\t4018528\t1874:1\tG\tG[1:4019251[\t22\tPASS\tEVDNC=ASSMB;INSERTION=CTC;MAPQ=60;MATEID=1874:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_4018001_4043001_10C;SPAN=723;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:15:15.5:22.1,0,15.5:8:0:-22.25:22.25\n1\t4019251\t1874:2\tT\t]1:4018528]T\t22\tPASS\tEVDNC=ASSMB;INSERTION=CTC;MAPQ=60;MATEID=1874:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_4018001_4043001_10C;SPAN=723;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:15:15.5:22.1,0,15.5:8:0:-22.25:22.25\n1\t6937887\t655207:1\tC\tC[12:132742761[\t20\tPASS\tDISC_MAPQ=22;EVDNC=DSCRD;IMPRECISE;MAPQ=22;MATEID=655207:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:6937887(+)-12:132742761(-)__12_132741001_132766001D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:35:20:20,0,66.2:0:9:-19.87:21.36\n1\t7429774\t888671:1\tT\tT[20:61337291[\t16\tPASS\tDISC_MAPQ=15;EVDNC=DSCRD;IMPRECISE;MAPQ=15;MATEID=888671:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:7429774(+)-20:61337291(-)__20_61323501_61348501D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:59:16.4:16.4,0,131.9:0:10:-16.43:21.68\n1\t9045606\t3054:1\tG\t]1:9049477]G\t82\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=GGCCGGGCATGGTGGCTCACGCCTGTAATCCCAGCA;MAPQ=60;MATEID=3054:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_9040501_9065501_7C;SPAN=3871;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:27:26:7.5:82.5,7.5,0:16:17:-82.52:82.52\n1\t9049477\t3054:2\tA\tA[1:9045606[\t82\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=GGCCGGGCATGGTGGCTCACGCCTGTAATCCCAGCA;MAPQ=60;MATEID=3054:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_9040501_9065501_7C;SPAN=3871;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:27:26:7.5:82.5,7.5,0:16:17:-82.52:82.52\n1\t13299454\t4064:1\tG\tG[6:33062526[\t46\tPASS\tDISC_MAPQ=13;EVDNC=TSI_L;MAPQ=23;MATEID=4064:2;MATENM=11;NM=1;NUMPARTS=3;REPSEQ=GG;SCTG=c_1_13279001_13304001_4C;SPAN=-1;SUBN=1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:16:12:4.2:46.2,4.2,0:13:5:-46.21:46.21\n1\t16621374\t4878:1\tC\t[1:16951695[C\t16\tPASS\tDISC_MAPQ=51;EVDNC=DSCRD;IMPRECISE;MAPQ=51;MATEID=4878:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:16621374(-)-1:16951695(-)__1_16611001_16636001D;SPAN=330321;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:37:16.1:16.1,0,75.5:0:8:-16.01:18.29\n1\t16725253\t63373:1\tA\t[1:234776441[A\t99\tPASS\tDISC_MAPQ=255;EVDNC=ASDIS;INSERTION=GCAGAAGCCGGCGGGATGGGGC;MAPQ=60;MATEID=63373:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_234759001_234784001_38C;SPAN=218051188;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:81:22:22.5:247.5,22.5,0:52:53:-247.6:247.6\n1\t16951695\t4878:2\tT\t[1:16621374[T\t16\tPASS\tDISC_MAPQ=51;EVDNC=DSCRD;IMPRECISE;MAPQ=51;MATEID=4878:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:16621374(-)-1:16951695(-)__1_16611001_16636001D;SPAN=330321;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:37:16.1:16.1,0,75.5:0:8:-16.01:18.29\n1\t23392332\t6511:1\tG\t]1:23392792]G\t29\tPASS\tDISC_MAPQ=25;EVDNC=DSCRD;IMPRECISE;MAPQ=25;MATEID=6511:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:23392332(-)-1:23392792(+)__1_23373001_23398001D;SPAN=460;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:25:29.3:29.3,0,32.6:0:11:-29.28:29.3\n1\t23392792\t6511:2\tC\tC[1:23392332[\t29\tPASS\tDISC_MAPQ=17;EVDNC=DSCRD;IMPRECISE;MAPQ=17;MATEID=6511:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:23392332(-)-1:23392792(+)__1_23373001_23398001D;SPAN=460;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:25:29.3:29.3,0,32.6:0:11:-29.28:29.3\n1\t23628304\t6591:1\tG\tG[1:23628951[\t49\tPASS\tDISC_MAPQ=40;EVDNC=ASDIS;HOMSEQ=GCCCACCTCGGCCTCCCAAAGTGCTGG;MAPQ=60;MATEID=6591:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_23618001_23643001_9C;SPAN=647;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:17:7:4.5:49.5,4.5,0:11:6:-49.51:49.51\n1\t23628951\t6591:2\tG\t]1:23628304]G\t49\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=GCCCACCTCGGCCTCCCAAAGTGCTGG;MAPQ=60;MATEID=6591:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_23618001_23643001_9C;SPAN=647;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:17:7:4.5:49.5,4.5,0:11:6:-49.51:49.51\n1\t24832212\t6918:1\tT\tT[1:24835019[\t46\tPASS\tEVDNC=ASSMB;HOMSEQ=TTGATTTTTTATTTTT;MAPQ=60;MATEID=6918:2;MATENM=5;NM=3;NUMPARTS=2;SCTG=c_1_24818501_24843501_5C;SPAN=2807;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:15:12:4.2:46.2,4.2,0:15:0:-46.21:46.21\n1\t24835019\t6918:2\tT\t]1:24832212]T\t46\tPASS\tEVDNC=ASSMB;HOMSEQ=TTGATTTTTTATTTTT;MAPQ=60;MATEID=6918:1;MATENM=3;NM=5;NUMPARTS=2;SCTG=c_1_24818501_24843501_5C;SPAN=2807;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:15:12:4.2:46.2,4.2,0:15:0:-46.21:46.21\n1\t25287187\t7022:1\tC\t]1:25405599]C\t23\tPASS\tDISC_MAPQ=42;EVDNC=DSCRD;IMPRECISE;MAPQ=42;MATEID=7022:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:25287187(-)-1:25405599(+)__1_25382001_25407001D;SPAN=118412;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:8:7:2.1:23.1,2.1,0:0:8:-23.11:23.11\n1\t25287371\t7007:1\tG\tG]1:25287867]\t19\tPASS\tDISC_MAPQ=17;EVDNC=DSCRD;IMPRECISE;MAPQ=17;MATEID=7007:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:25287371(+)-1:25287867(+)__1_25284001_25309001D;SPAN=496;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:26:19.1:19.1,0,45.5:0:8:-19.1:19.73\n1\t25287867\t7007:2\tC\tC]1:25287371]\t19\tPASS\tDISC_MAPQ=46;EVDNC=DSCRD;IMPRECISE;MAPQ=46;MATEID=7007:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:25287371(+)-1:25287867(+)__1_25284001_25309001D;SPAN=496;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:26:19.1:19.1,0,45.5:0:8:-19.1:19.73\n1\t25405599\t7022:2\tA\tA[1:25287187[\t23\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=7022:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:25287187(-)-1:25405599(+)__1_25382001_25407001D;SPAN=118412;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:8:7:2.1:23.1,2.1,0:0:8:-23.11:23.11\n1\t28189261\t847363:1\tT\tT]19:23845125]\t23\tPASS\tDISC_MAPQ=57;EVDNC=DSCRD;IMPRECISE;MAPQ=57;MATEID=847363:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:28189261(+)-19:23845125(+)__19_23838501_23863501D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:22:23.6:23.6,0,30.2:0:9:-23.53:23.59\n1\t28410089\t7545:1\tC\t]1:28410215]C\t26\tPASS\tEVDNC=ASSMB;HOMSEQ=CC;MAPQ=60;MATEID=7545:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_28395501_28420501_15C;SPAN=126;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:24:26.3:26.3,0,32.9:10:0:-26.26:26.32\n1\t28410215\t7545:2\tC\tC[1:28410089[\t26\tPASS\tEVDNC=ASSMB;HOMSEQ=CC;MAPQ=60;MATEID=7545:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_28395501_28420501_15C;SPAN=126;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:24:26.3:26.3,0,32.9:10:0:-26.26:26.32\n1\t29279188\t307504:1\tT\tT]5:110659597]\t28\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=307504:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:29279188(+)-5:110659597(+)__5_110642001_110667001D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:16:8.9:28.7,0,8.9:0:10:-28.89:28.89\n1\t29552243\t7974:1\tN\tN]1:30655921]\t20\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=7974:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:29552243(+)-1:30655921(+)__1_30649501_30674501D;SPAN=1103678;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:22:20.3:20.3,0,33.5:0:8:-20.22:20.45\n1\t30655921\t7974:2\tG\tG]1:29552243]\t20\tPASS\tDISC_MAPQ=53;EVDNC=DSCRD;IMPRECISE;MAPQ=53;MATEID=7974:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:29552243(+)-1:30655921(+)__1_30649501_30674501D;SPAN=1103678;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:22:20.3:20.3,0,33.5:0:8:-20.22:20.45\n1\t32790315\t122996:1\tT\tT]2:161095746]\t19\tPASS\tDISC_MAPQ=32;EVDNC=DSCRD;IMPRECISE;MAPQ=32;MATEID=122996:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:32790315(+)-2:161095746(+)__2_161087501_161112501D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:24:19.7:19.7,0,39.5:0:8:-19.66:20.07\n1\t33010843\t14040:1\tA\tA[1:58630799[\t28\tPASS\tDISC_MAPQ=41;EVDNC=DSCRD;IMPRECISE;MAPQ=41;MATEID=14040:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:33010843(+)-1:58630799(-)__1_58628501_58653501D;SPAN=25619956;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:27:28.7:28.7,0,38.6:0:11:-28.72:28.81\n1\t33050733\t8608:1\tA\t]7:24409092]A\t99\tPASS\tEVDNC=ASSMB;INSERTION=G;MAPQ=60;MATEID=8608:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_33050501_33075501_8C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:37:32:10.2:112.2,10.2,0:37:0:-112.2:112.2\n1\t35161530\t8994:1\tC\tC[1:35161848[\t82\tPASS\tDISC_MAPQ=56;EVDNC=ASDIS;HOMSEQ=GGGC;MAPQ=60;MATEID=8994:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_35157501_35182501_39C;SPAN=318;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:27:13:7.5:82.5,7.5,0:22:7:-82.52:82.52\n1\t35161848\t8994:2\tG\t]1:35161530]G\t82\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=GGGC;MAPQ=60;MATEID=8994:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_35157501_35182501_39C;SPAN=318;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:27:13:7.5:82.5,7.5,0:22:7:-82.52:82.52\n1\t35259113\t739080:1\tA\tA[15:76800145[\t92\tPASS\tDISC_MAPQ=8;EVDNC=ASDIS;HOMSEQ=A;MAPQ=33;MATEID=739080:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_15_76783001_76808001_25C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:31:21:8.4:92.4,8.4,0:29:9:-92.42:92.42\n1\t36267575\t9227:1\tC\tC]1:36269076]\t17\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=9227:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:36267575(+)-1:36269076(+)__1_36260001_36285001D;SPAN=1501;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:33:17.3:17.3,0,63.5:0:8:-17.13:18.75\n1\t36267982\t9229:1\tC\t[1:36268906[C\t69\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=CCAGCCTGGCCAATATGGTGAAACCCCATCTCTACT;MAPQ=60;MATEID=9229:2;MATENM=1;NM=2;NUMPARTS=2;SCTG=c_1_36260001_36285001_7C;SPAN=924;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:23:21:6.3:69.3,6.3,0:18:7:-69.32:69.32\n1\t36268906\t9229:2\tA\t[1:36267982[A\t69\tPASS\tDISC_MAPQ=57;EVDNC=ASDIS;HOMSEQ=CCAGCCTGGCCAATATGGTGAAACCCCATCTCTACT;MAPQ=60;MATEID=9229:1;MATENM=2;NM=1;NUMPARTS=2;SCTG=c_1_36260001_36285001_7C;SPAN=924;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:23:21:6.3:69.3,6.3,0:18:7:-69.32:69.32\n1\t36269076\t9227:2\tT\tT]1:36267575]\t17\tPASS\tDISC_MAPQ=54;EVDNC=DSCRD;IMPRECISE;MAPQ=54;MATEID=9227:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:36267575(+)-1:36269076(+)__1_36260001_36285001D;SPAN=1501;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:33:17.3:17.3,0,63.5:0:8:-17.13:18.75\n1\t36958707\t9337:1\tC\tC[1:36960147[\t66\tPASS\tDISC_MAPQ=40;EVDNC=DSCRD;IMPRECISE;MAPQ=40;MATEID=9337:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:36958707(+)-1:36960147(-)__1_36946001_36971001D;SPAN=1440;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:22:4:6:66,6,0:0:22:-66.02:66.02\n1\t36960147\t9337:2\tG\t]1:36958707]G\t66\tPASS\tDISC_MAPQ=53;EVDNC=DSCRD;IMPRECISE;MAPQ=53;MATEID=9337:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:36958707(+)-1:36960147(-)__1_36946001_36971001D;SPAN=1440;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:22:4:6:66,6,0:0:22:-66.02:66.02\n1\t37472656\t90165:1\tT\t]2:68687747]T\t41\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;INSERTION=ATTATTAG;MAPQ=60;MATEID=90165:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_68673501_68698501_14C;SPAN=-1;SUBN=7;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:19:4.7:41,0,4.7:9:10:-42.24:42.24\n1\t37472775\t90166:1\tG\tG[2:68687751[\t56\tPASS\tEVDNC=ASSMB;HOMSEQ=CCAG;MAPQ=60;MATEID=90166:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_2_68673501_68698501_111C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:19:18:5.1:56.1,5.1,0:19:0:-56.11:56.11\n1\t39504305\t9980:1\tT\t]1:39504874]T\t65\tPASS\tDISC_MAPQ=51;EVDNC=DSCRD;IMPRECISE;MAPQ=51;MATEID=9980:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:39504305(-)-1:39504874(+)__1_39494001_39519001D;SPAN=569;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:23:37:26:65.6,0,26:0:23:-66.36:66.36\n1\t39504874\t9980:2\tG\tG[1:39504305[\t65\tPASS\tDISC_MAPQ=59;EVDNC=DSCRD;IMPRECISE;MAPQ=59;MATEID=9980:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:39504305(-)-1:39504874(+)__1_39494001_39519001D;SPAN=569;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:23:37:26:65.6,0,26:0:23:-66.36:66.36\n1\t43593625\t10849:1\tG\tG]1:43594215]\t69\tPASS\tEVDNC=ASSMB;HOMSEQ=GCCAGGCACGGTGGCT;INSERTION=AC;MAPQ=60;MATEID=10849:2;MATENM=0;NM=3;NUMPARTS=3;SCTG=c_1_43585501_43610501_3C;SECONDARY;SPAN=590;SUBN=6;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:23:13:6.3:69.3,6.3,0:23:0:-69.32:69.32\n1\t43594215\t10849:2\tG\tG]1:43593625]\t69\tPASS\tEVDNC=ASSMB;HOMSEQ=GCCAGGCACGGTGGCT;INSERTION=AC;MAPQ=60;MATEID=10849:1;MATENM=3;NM=0;NUMPARTS=3;SCTG=c_1_43585501_43610501_3C;SECONDARY;SPAN=590;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:23:13:6.3:69.3,6.3,0:23:0:-69.32:69.32\n1\t44098924\t160041:1\tT\t]3:41609700]T\t29\tPASS\tDISC_MAPQ=53;EVDNC=DSCRD;IMPRECISE;MAPQ=53;MATEID=160041:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:44098924(-)-3:41609700(+)__3_41601001_41626001D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:10:10:2.7:29.7,2.7,0:0:10:-29.71:29.71\n1\t44104205\t160035:1\tT\tT[3:41580812[\t42\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=160035:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_3_41576501_41601501_10C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:14:14:3.9:42.9,3.9,0:14:0:-42.91:42.91\n1\t44779028\t11200:1\tT\tT[1:44779477[\t17\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=11200:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_44761501_44786501_16C;SPAN=449;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:7:22:17:17,0,36.8:7:0:-16.92:17.39\n1\t44779477\t11200:2\tC\t]1:44779028]C\t17\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=11200:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_44761501_44786501_16C;SPAN=449;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:7:22:17:17,0,36.8:7:0:-16.92:17.39\n1\t45703368\t11370:1\tT\tT[Un_KN707671v1_decoy:1[\t66\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=11370:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_45692501_45717501_22C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:22:19:6:66,6,0:22:0:-66.02:66.02\n1\t46939969\t11731:1\tA\t[1:47138878[A\t38\tPASS\tDISC_MAPQ=52;EVDNC=DSCRD;IMPRECISE;MAPQ=52;MATEID=11731:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:46939969(-)-1:47138878(-)__1_47138001_47163001D;SPAN=198909;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:18:5:38,0,5:0:13:-39.01:39.01\n1\t47138878\t11731:2\tA\t[1:46939969[A\t38\tPASS\tDISC_MAPQ=54;EVDNC=DSCRD;IMPRECISE;MAPQ=54;MATEID=11731:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:46939969(-)-1:47138878(-)__1_47138001_47163001D;SPAN=198909;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:18:5:38,0,5:0:13:-39.01:39.01\n1\t51609009\t12475:1\tA\t]1:51840062]A\t26\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=A;MAPQ=60;MATEID=12475:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_1_51817501_51842501_2C;SPAN=231053;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:23:26.6:26.6,0,29.9:8:8:-26.55:26.57\n1\t51840062\t12475:2\tA\tA[1:51609009[\t26\tPASS\tDISC_MAPQ=52;EVDNC=ASDIS;HOMSEQ=A;MAPQ=60;MATEID=12475:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_1_51817501_51842501_2C;SPAN=231053;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:23:26.6:26.6,0,29.9:8:8:-26.55:26.57\n1\t53952867\t12975:1\tT\t]1:56216061]T\t45\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TT;MAPQ=60;MATEID=12975:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_53949001_53974001_65C;SPAN=2263194;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:17:39:45.2:45.2,0,51.8:9:14:-45.15:45.19\n1\t53952995\t12977:1\tC\t]18:6317356]C\t15\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;MAPQ=60;MATEID=12977:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_53949001_53974001_190C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:52:15.2:15.2,0,114.2:6:3:-15.09:19.61\n1\t53953226\t12984:1\tG\tG[9:25849461[\t22\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;MAPQ=60;MATEID=12984:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_53949001_53974001_66C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:39:22.1:22.1,0,74.9:6:6:-22.05:23.72\n1\t53953310\t12986:1\tT\tT]1:53953873]\t28\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=12986:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:53953310(+)-1:53953873(+)__1_53949001_53974001D;SPAN=563;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:40:28.4:28.4,0,71.3:0:12:-28.37:29.43\n1\t53953873\t12986:2\tA\tA]1:53953310]\t28\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=12986:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:53953310(+)-1:53953873(+)__1_53949001_53974001D;SPAN=563;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:40:28.4:28.4,0,71.3:0:12:-28.37:29.43\n1\t53953907\t866065:1\tC\t[20:21065659[C\t32\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=CT;MAPQ=60;MATEID=866065:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_21045501_21070501_8C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:14:2.6:32.3,0,2.6:9:4:-33.83:33.83\n1\t53954234\t13008:1\tT\t[8:1724902[T\t26\tPASS\tDISC_MAPQ=60;EVDNC=TSI_L;HOMSEQ=A;INSERTION=AGCCCAGAGACAGAGCTTTCAAGGTGCCTGCTCAGTTTATGAGCCAAGTTTCTATTCTTTTCTGCATGTGTTT;MAPQ=60;MATEID=13008:2;MATENM=0;NM=0;NUMPARTS=3;SCTG=c_1_53949001_53974001_174C;SPAN=-1;SUBN=1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:16:93:26.9:26.9,0,205.1:16:3:-26.67:34.81\n1\t53954236\t260688:1\tA\tA[4:149687001[\t30\tPASS\tEVDNC=ASSMB;HOMSEQ=ACATAA;MAPQ=60;MATEID=260688:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_149670501_149695501_34C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:22:23.6:30.2,0,23.6:11:0:-30.15:30.15\n1\t53954306\t578367:1\tC\t[11:20762949[C\t39\tPASS\tDISC_MAPQ=255;EVDNC=ASDIS;MAPQ=60;MATEID=578367:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_20751501_20776501_46C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:13:9:3.6:39.6,3.6,0:11:3:-39.61:39.61\n1\t53954324\t13015:1\tC\t]13:56018554]C\t0\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=13015:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_53949001_53974001_79C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/0:7:108:6.9:0,6.9,283.8:7:0:7.251:12.08\n1\t53954398\t13030:1\tT\tT[4:116923084[\t0\tPASS\tEVDNC=ASSMB;HOMSEQ=TATTTCAT;MAPQ=60;MATEID=13030:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_1_53949001_53974001_46C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/0:7:98:4.2:0,4.2,254.1:7:0:4.44:12.39\n1\t53954555\t13050:1\tT\tT]2:198602574]\t16\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AAT;MAPQ=60;MATEID=13050:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_53949001_53974001_99C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:94:16.7:16.7,0,218:11:5:-16.49:26.94\n1\t53954591\t23420:1\tT\t[1:101901145[T\t27\tPASS\tDISC_MAPQ=255;EVDNC=ASDIS;HOMSEQ=GA;MAPQ=60;MATEID=23420:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_101895501_101920501_8C;SPAN=47946554;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:19:17.9:27.8,0,17.9:8:3:-27.73:27.73\n1\t53954647\t355239:1\tT\t[6:94103373[T\t49\tPASS\tDISC_MAPQ=255;EVDNC=ASDIS;HOMSEQ=AATA;MAPQ=60;MATEID=355239:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_94080001_94105001_4C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:16:17:4.5:49.5,4.5,0:10:12:-49.51:49.51\n1\t53954656\t13059:1\tT\t]9:29653849]T\t7\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=13059:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_53949001_53974001_206C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:90:7.7:7.7,0,218.9:10:0:-7.712:19.71\n1\t53954687\t283944:1\tT\t]5:28235202]T\t38\tPASS\tDISC_MAPQ=255;EVDNC=ASDIS;HOMSEQ=TT;MAPQ=60;MATEID=283944:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_5_28224001_28249001_78C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:27:28.7:38.6,0,28.7:9:10:-38.69:38.69\n1\t53954735\t13066:1\tC\t]X:141414291]C\t0\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=CTG;MAPQ=60;MATEID=13066:2;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_1_53949001_53974001_18C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:94:0.2:0.2,0,234.5:6:4:0.01462:14.79\n1\t53954830\t13069:1\tG\tG[7:71849933[\t3\tPASS\tEVDNC=ASSMB;INSERTION=ACAGTACTACAATGAACACTCTTA;MAPQ=60;MATEID=13069:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_53949001_53974001_68C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:93:3.8:3.8,0,228.2:9:0:-3.568:17.17\n1\t53954930\t23510:1\tT\t]1:102149200]T\t39\tPASS\tEVDNC=ASSMB;HOMSEQ=T;MAPQ=60;MATEID=23510:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_102140501_102165501_11C;SPAN=48194270;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:12:13:3.6:39.6,3.6,0:12:0:-39.28:39.28\n1\t53955314\t13082:1\tT\tT[14:54941811[\t28\tPASS\tDISC_MAPQ=50;EVDNC=DSCRD;IMPRECISE;MAPQ=50;MATEID=13082:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:53955314(+)-14:54941811(-)__1_53949001_53974001D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:16:8.9:28.7,0,8.9:0:10:-28.89:28.89\n1\t55240234\t998154:1\tG\tG]Un_JTFH01000519v1_decoy:1533]\t95\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=998154:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1362_1_1533_0C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:32:9:8.7:95.7,8.7,0:32:0:-95.72:95.72\n1\t56216061\t12975:2\tT\tT[1:53952867[\t45\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TT;MAPQ=60;MATEID=12975:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_53949001_53974001_65C;SPAN=2263194;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:17:39:45.2:45.2,0,51.8:9:14:-45.15:45.19\n1\t56365452\t13595:1\tC\tC[1:56369290[\t79\tPASS\tEVDNC=ASSMB;HOMSEQ=AAAAAGAACCACTGCCTC;MAPQ=60;MATEID=13595:2;MATENM=3;NM=9;NUMPARTS=2;SCTG=c_1_56350001_56375001_21C;SPAN=3838;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:26:20:7.2:79.2,7.2,0:26:0:-79.22:79.22\n1\t56369290\t13595:2\tA\t]1:56365452]A\t79\tPASS\tEVDNC=ASSMB;HOMSEQ=AAAAAGAACCACTGCCTC;MAPQ=60;MATEID=13595:1;MATENM=9;NM=3;NUMPARTS=2;SCTG=c_1_56350001_56375001_21C;SPAN=3838;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:26:20:7.2:79.2,7.2,0:26:0:-79.22:79.22\n1\t56530361\t13644:1\tC\t]1:56530674]C\t35\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;INSERTION=G;MAPQ=60;MATEID=13644:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_1_56521501_56546501_16C;SPAN=313;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:39:35.3:35.3,0,61.7:14:3:-35.25:35.68\n1\t56530674\t13644:2\tT\tT[1:56530361[\t35\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;INSERTION=G;MAPQ=60;MATEID=13644:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_1_56521501_56546501_16C;SPAN=313;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:39:35.3:35.3,0,61.7:14:3:-35.25:35.68\n1\t58630799\t14040:2\tC\t]1:33010843]C\t28\tPASS\tDISC_MAPQ=38;EVDNC=DSCRD;IMPRECISE;MAPQ=38;MATEID=14040:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:33010843(+)-1:58630799(-)__1_58628501_58653501D;SPAN=25619956;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:27:28.7:28.7,0,38.6:0:11:-28.72:28.81\n1\t58631258\t78199:1\tT\tT[2:31823482[\t52\tPASS\tDISC_MAPQ=50;EVDNC=DSCRD;IMPRECISE;MAPQ=50;MATEID=78199:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:58631258(+)-2:31823482(-)__2_31801001_31826001D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:18:15:4.8:52.8,4.8,0:0:18:-52.81:52.81\n1\t59491056\t439496:1\tT\t[8:6678940[T\t42\tPASS\tDISC_MAPQ=255;EVDNC=ASDIS;HOMSEQ=AGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAA;MAPQ=45;MATEID=439496:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_6664001_6689001_35C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:14:6:3.9:42.9,3.9,0:12:2:-42.91:42.91\n1\t60822424\t14479:1\tA\t]1:60822666]A\t99\tPASS\tEVDNC=ASSMB;HOMSEQ=ATA;MAPQ=60;MATEID=14479:2;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_1_60809001_60834001_4C;SPAN=242;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:35:58:46.4:99.2,0,46.4:35:0:-100.3:100.3\n1\t60822666\t14479:2\tA\tA[1:60822424[\t99\tPASS\tEVDNC=ASSMB;HOMSEQ=ATA;MAPQ=60;MATEID=14479:1;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_1_60809001_60834001_4C;SPAN=242;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:35:58:46.4:99.2,0,46.4:35:0:-100.3:100.3\n1\t63956963\t16730:1\tC\tC]1:70234741]\t29\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=16730:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:63956963(+)-1:70234741(+)__1_70217001_70242001D;SPAN=6277778;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:14:5.9:29,0,5.9:0:10:-29.91:29.91\n1\t64373280\t15448:1\tT\tT]1:64389687]\t23\tPASS\tDISC_MAPQ=54;EVDNC=DSCRD;IMPRECISE;MAPQ=54;MATEID=15448:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:64373280(+)-1:64389687(+)__1_64386001_64411001D;SPAN=16407;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:11:3.5:23.3,0,3.5:0:8:-24.05:24.05\n1\t64389687\t15448:2\tT\tT]1:64373280]\t23\tPASS\tDISC_MAPQ=25;EVDNC=DSCRD;IMPRECISE;MAPQ=25;MATEID=15448:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:64373280(+)-1:64389687(+)__1_64386001_64411001D;SPAN=16407;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:11:3.5:23.3,0,3.5:0:8:-24.05:24.05\n1\t65345199\t17796:1\tT\t]1:74835106]T\t56\tPASS\tDISC_MAPQ=59;EVDNC=DSCRD;IMPRECISE;MAPQ=59;MATEID=17796:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:65345199(-)-1:74835106(+)__1_74823001_74848001D;SPAN=9489907;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:19:7:5.1:56.1,5.1,0:0:19:-56.11:56.11\n1\t70234741\t16730:2\tC\tC]1:63956963]\t29\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=16730:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:63956963(+)-1:70234741(+)__1_70217001_70242001D;SPAN=6277778;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:14:5.9:29,0,5.9:0:10:-29.91:29.91\n1\t72339814\t989548:1\tC\tC]Un_KN707820v1_decoy:8307]\t62\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=989548:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_671_1_8307_5C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:21:6:5.7:62.7,5.7,0:21:0:-62.72:62.72\n1\t73903568\t81804:1\tT\t]2:40869772]T\t18\tPASS\tEVDNC=ASSMB;INSERTION=GAT;MAPQ=60;MATEID=81804:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_40866001_40891001_21C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:7:18:18.2:18.2,0,24.8:7:0:-18.05:18.15\n1\t74835106\t17796:2\tC\tC[1:65345199[\t56\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=17796:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:65345199(-)-1:74835106(+)__1_74823001_74848001D;SPAN=9489907;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:19:7:5.1:56.1,5.1,0:0:19:-56.11:56.11\n1\t79184460\t18692:1\tA\t]1:79184589]A\t51\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=18692:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_79184001_79209001_0C;SPAN=129;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:18:28:18.5:51.5,0,18.5:18:0:-52.37:52.37\n1\t79184589\t18692:2\tA\tA[1:79184460[\t51\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=18692:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_79184001_79209001_0C;SPAN=129;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:18:28:18.5:51.5,0,18.5:18:0:-52.37:52.37\n1\t79756214\t18804:1\tG\tG[1:79757394[\t42\tPASS\tDISC_MAPQ=49;EVDNC=DSCRD;IMPRECISE;MAPQ=49;MATEID=18804:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:79756214(+)-1:79757394(-)__1_79747501_79772501D;SPAN=1180;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:14:7:3.9:42.9,3.9,0:0:14:-42.91:42.91\n1\t79757394\t18804:2\tC\t]1:79756214]C\t42\tPASS\tDISC_MAPQ=59;EVDNC=DSCRD;IMPRECISE;MAPQ=59;MATEID=18804:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:79756214(+)-1:79757394(-)__1_79747501_79772501D;SPAN=1180;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:14:7:3.9:42.9,3.9,0:0:14:-42.91:42.91\n1\t81194666\t19073:1\tT\tT]1:81195873]\t69\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TTT;MAPQ=60;MATEID=19073:2;MATENM=1;NM=6;NUMPARTS=2;SCTG=c_1_81193001_81218001_6C;SPAN=1207;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:23:21:6.3:69.3,6.3,0:19:4:-69.32:69.32\n1\t81194672\t19074:1\tC\t[1:81195686[C\t24\tPASS\tEVDNC=ASSMB;INSERTION=ATTTTAAATTATTAAAAAA;MAPQ=60;MATEID=19074:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_81193001_81218001_0C;SPAN=1014;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:18:18.2:24.8,0,18.2:9:0:-24.67:24.67\n1\t81195686\t19074:2\tT\t[1:81194672[T\t24\tPASS\tEVDNC=ASSMB;INSERTION=ATTTTAAATTATTAAAAAA;MAPQ=60;MATEID=19074:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_81193001_81218001_0C;SPAN=1014;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:18:18.2:24.8,0,18.2:9:0:-24.67:24.67\n1\t81195873\t19073:2\tA\tA]1:81194666]\t69\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TTT;MAPQ=60;MATEID=19073:1;MATENM=6;NM=1;NUMPARTS=2;SCTG=c_1_81193001_81218001_6C;SPAN=1207;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:23:21:6.3:69.3,6.3,0:19:4:-69.32:69.32\n1\t82660293\t19398:1\tC\tC[1:82661887[\t42\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AAAAAAAATGGTTCATGC;MAPQ=60;MATEID=19398:2;MATENM=3;NM=5;NUMPARTS=2;SCTG=c_1_82638501_82663501_1C;SPAN=1594;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:14:7:3.9:42.9,3.9,0:10:9:-42.91:42.91\n1\t82661887\t19398:2\tA\t]1:82660293]A\t42\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AAAAAAAATGGTTCATGC;MAPQ=60;MATEID=19398:1;MATENM=5;NM=3;NUMPARTS=2;SCTG=c_1_82638501_82663501_1C;SPAN=1594;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:14:7:3.9:42.9,3.9,0:10:9:-42.91:42.91\n1\t83390671\t407388:1\tA\t]7:76846695]A\t16\tPASS\tDISC_MAPQ=43;EVDNC=DSCRD;IMPRECISE;MAPQ=43;MATEID=407388:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:83390671(-)-7:76846695(+)__7_76832001_76857001D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:35:16.7:16.7,0,69.5:0:8:-16.57:18.51\n1\t83390908\t407389:1\tT\tT[7:76847406[\t47\tPASS\tDISC_MAPQ=58;EVDNC=DSCRD;IMPRECISE;MAPQ=58;MATEID=407389:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:83390908(+)-7:76847406(-)__7_76832001_76857001D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:17:32:30.8:47.3,0,30.8:0:17:-47.25:47.25\n1\t83426016\t407403:1\tG\t]7:76882570]G\t25\tPASS\tDISC_MAPQ=54;EVDNC=DSCRD;IMPRECISE;MAPQ=54;MATEID=407403:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:83426016(-)-7:76882570(+)__7_76881001_76906001D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:15:12.2:25.4,0,12.2:0:9:-25.74:25.74\n1\t83590531\t19632:1\tT\t]1:83591652]T\t69\tPASS\tEVDNC=ASSMB;INSERTION=TATCAA;MAPQ=60;MATEID=19632:2;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_1_83569501_83594501_12C;SPAN=1121;SVTYPE=B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AN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:35:38:10.5:115.5,10.5,0:22:32:-114.4:114.4\n1\t107577023\t885591:1\tA\tA[20:53413597[\t69\tPASS\tEVDNC=ASSMB;INSERTION=GTAAATA;MAPQ=60;MATEID=885591:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_53410001_53435001_13C;SPAN=-1;SUBN=3;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:21:23:6.3:69.3,6.3,0:21:0:-68.32:68.32\n1\t107584696\t27430:1\tC\t[1:113807900[C\t58\tPASS\tDISC_MAPQ=255;EVDNC=ASDIS;HOMSEQ=TG;MAPQ=60;MATEID=27430:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_113802501_113827501_116C;SPAN=6223204;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:24:75:58.1:58.1,0,130.7:7:17:-58.14:59.68\n1\t107860352\t25484:1\tT\tT[1:107862863[\t50\tPASS\tEVDNC=ASSMB;HOMSEQ=ATT;MAPQ=60;MATEID=25484:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_107849001_107874001_69C;SPAN=2511;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:21:69:50:50,0,122.6:21:0:-49.93:51.66\n1\t107862863\t25484:2\tA\t]1:107860352]A\t50\tPASS\tEVDNC=ASSMB;HOMSEQ=ATT;MAPQ=60;MATEID=25484:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_107849001_107874001_69C;SPAN=2511;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:21:69:50:50,0,122.6:21:0:-49.93:51.66\n1\t108105777\t25624:2\tC\t]1:106886633]C\t99\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=25624:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_108094001_108119001_64C;SPAN=1219144;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:38:72:75.5:105.2,0,75.5:38:0:-105.4:105.4\n1\t108106953\t25634:1\tC\tC[20:47414043[\t76\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=25634:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_108094001_108119001_99C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:27:46:36.8:76.4,0,36.8:27:0:-76.82:76.82\n1\t108824497\t25945:1\tT\tT[1:108829337[\t29\tPASS\tDISC_MAPQ=54;EVDNC=DSCRD;IMPRECISE;MAPQ=54;MATEID=25945:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:108824497(+)-1:108829337(-)__1_108829001_108854001D;SPAN=4840;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:10:12:0:29.7,0,0:0:10:-31.35:31.35\n1\t108829337\t25945:2\tT\t]1:108824497]T\t29\tPASS\tDISC_MAPQ=49;EVDNC=DSCRD;IMPRECISE;MAPQ=49;MATEID=25945:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:108824497(+)-1:108829337(-)__1_108829001_108854001D;SPAN=4840;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:10:12:0:29.7,0,0:0:10:-31.35:31.35\n1\t108952236\t184409:1\tT\t]3:110694547]T\t89\tPASS\tEVDNC=ASSMB;INSERTION=TTGCAG;MAPQ=60;MATEID=184409:2;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_3_110691001_110716001_3C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:29:12:8.1:89.1,8.1,0:29:0:-89.12:89.12\n1\t109030610\t25996:1\tT\tT[1:109032559[\t43\tPASS\tEVDNC=ASSMB;HOMSEQ=T;MAPQ=60;MATEID=25996:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_109025001_109050001_35C;SPAN=1949;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:15:23:13.4:43.1,0,13.4:15:0:-43.8:43.8\n1\t109032559\t25996:2\tT\t]1:109030610]T\t43\tPASS\tEVDNC=ASSMB;HOMSEQ=T;MAPQ=60;MATEID=25996:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_109025001_109050001_35C;SPAN=1949;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:15:23:13.4:43.1,0,13.4:15:0:-43.8:43.8\n1\t109194083\t508919:1\tT\t[9:104854285[T\t44\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;INSERTION=AATGTCTCCAGGACATTTTTGTATA;MAPQ=60;MATEID=508919:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_104835501_104860501_16C;SPAN=-1;SUBN=8;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:15:20:4.4:44,0,4.4:12:10:-45.49:45.49\n1\t109198402\t504384:1\tC\tC[9:89437208[\t42\tPASS\tEVDNC=ASSMB;INSERTION=ACCATATATATAAATGTATGGCTGGAGA;MAPQ=60;MATEID=504384:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_89425001_89450001_6C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:15:25:19.4:42.5,0,19.4:15:0:-42.9:42.9\n1\t111822912\t809881:1\tT\t[17:58962856[T\t99\tPASS\tDISC_MAPQ=255;EVDNC=ASDIS;HOMSEQ=GA;MAPQ=60;MATEID=809881:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_17_58947001_58972001_6C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:50:105:99:135.5,0,128.9:34:28:-135.5:135.5\n1\t111868101\t26772:2\tG\tG[1:107060056[\t27\tPASS\tEVDNC=ASSMB;HOMSEQ=TG;MAPQ=60;MATEID=26772:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_111867001_111892001_5C;SPAN=4808045;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:16:92:27.2:27.2,0,202.1:16:0:-26.96:34.89\n1\t112292483\t26890:1\tA\tA[1:112295044[\t92\tPASS\tEVDNC=ASSMB;HOMSEQ=AAAAGAGGACACAAACAA;MAPQ=60;MATEID=26890:2;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_1_112283501_112308501_38C;SPAN=2561;SUBN=1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:30:16:8.4:92.4,8.4,0:30:0:-92.42:92.42\n1\t112295044\t26890:2\tA\t]1:112292483]A\t92\tPASS\tEVDNC=ASSMB;HOMSEQ=AAAAGAGGACACAAACAA;MAPQ=60;MATEID=26890:1;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_1_112283501_112308501_38C;SPAN=2561;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:30:16:8.4:92.4,8.4,0:30:0:-92.42:92.42\n1\t113068804\t27110:1\tC\tC[1:113071155[\t72\tPASS\tDISC_MAPQ=54;EVDNC=DSCRD;IMPRECISE;MAPQ=54;MATEID=27110:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:113068804(+)-1:113071155(-)__1_113067501_113092501D;SPAN=2351;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:24:9:6.6:72.6,6.6,0:0:24:-72.62:72.62\n1\t113071155\t27110:2\tA\t]1:113068804]A\t72\tPASS\tDISC_MAPQ=58;EVDNC=DSCRD;IMPRECISE;MAPQ=58;MATEID=27110:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:113068804(+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;MAPQ=20;MATEID=33738:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:123508702(-)-1:124397084(+)__1_124386501_124411501D;SPAN=888382;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:19:21.2:21.2,0,24.5:0:8:-21.07:21.11\n1\t124801523\t34161:1\tG\t]1:124809210]G\t33\tPASS\tDISC_MAPQ=23;EVDNC=DSCRD;IMPRECISE;MAPQ=23;MATEID=34161:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:124801523(-)-1:124809210(+)__1_124803001_124828001D;SPAN=7687;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:11:1:3:33,3,0:0:11:-33.01:33.01\n1\t124809210\t34161:2\tC\tC[1:124801523[\t33\tPASS\tDISC_MAPQ=24;EVDNC=DSCRD;IMPRECISE;MAPQ=24;MATEID=34161:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:124801523(-)-1:124809210(+)__1_124803001_124828001D;SPAN=7687;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:11:1:3:33,3,0:0:11:-33.01:33.01\n1\t124977945\t34306:1\tN\tN[1:124978327[\t99\tPASS\tDISC_MAPQ=255;EVDNC=TSI_G;INSERTION=GCCGGAAATTGCTCCAAGCATCCACCTACATATCCTGCAAAGAAACTGTTTCTAAACAGCTCTCTCAAGAGGAAGGTGCAGCTCTGTGAGTTGAATGCACACATCACAAACAAATTCCTGAGAATGCTTCTGTCTAGTTTTTCTGTGAAGATATTTCCTTTTCCAACATAGGCTTCAAATCGCTCCAAATATCCAATTGCAGATTCTGCAAAAAGATTGTTT;MAPQ=60;MATEID=34306:2;MATENM=0;NM=1;NUMPARTS=3;SCTG=c_1_124974501_124999501_30C;SPAN=382;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:40:8:11.1:122.1,11.1,0:40:0:-122.1:122.1\n1\t124978327\t34306:2\tC\t]1:124977945]C\t99\tPASS\tDISC_MAPQ=255;EVDNC=TSI_G;INSERTION=GCCGGAAATTGCTCCAAGCATCCACCTACATATCCTGCAAAGAAACTGTTTCTAAACAGCTCTCTCAAGAGGAAGGTGCAGCTCTGTGAGTTGAATGCACACATCACAAACAAATTCCTGAGAATGCTTCTGTCTAGTTTTTCTGTGAAGATATTTCCTTTTCCAACATAGGCTTCAAATCGCTCCAAATATCCAATTGCAGATTCTGCAAAAAGATTGTTT;MAPQ=60;MATEID=34306:1;MATENM=1;NM=0;NUMPARTS=3;SCTG=c_1_124974501_124999501_30C;SPAN=382;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:40:8:11.1:122.1,11.1,0:40:0:-122.1:122.1\n1\t125080586\t34586:1\tC\t]1:125080769]C\t0\tPASS\tEVDNC=ASSMB;HOMSEQ=CATTCGAGTCCATT;MAPQ=60;MATEID=34586:2;MATENM=6;NM=3;NUMPARTS=2;SCTG=c_1_125072501_125097501_328C;SPAN=183;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/0:8:299:57.5:0,57.5,868.1:8:0:57.64:10.7\n1\t125080769\t34586:2\tT\tT[1:125080586[\t0\tPASS\tEVDNC=ASSMB;HOMSEQ=CATTCGAGTCCATT;MAPQ=36;MATEID=34586:1;MATENM=3;NM=6;NUMPARTS=2;SCTG=c_1_125072501_125097501_328C;SPAN=183;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/0:8:299:57.5:0,57.5,868.1:8:0:57.64:10.7\n1\t143864342\t35280:1\tT\tT]1:207739629]\t36\tPASS\tDISC_MAPQ=4;EVDNC=ASDIS;INSERTION=CTCC;MAPQ=17;MATEID=35280:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_143864001_143889001_6C;SPAN=63875287;SUBN=2;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:12:9:3.3:36.3,3.3,0:9:6:-36.31:36.31\n1\t145815067\t36638:1\tG\t]1:148070222]G\t20\tPASS\tDISC_MAPQ=57;EVDNC=DSCRD;IMPRECISE;MAPQ=57;MATEID=36638:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:145815067(-)-1:148070222(+)__1_148053501_148078501D;SPAN=2255155;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:23:20:20,0,36.5:0:8:-19.94:20.25\n1\t147652890\t36513:1\tG\t]1:147653211]G\t17\tPASS\tDISC_MAPQ=11;EVDNC=ASDIS;HOMSEQ=GATCTCGGCTCACTGCAA;MAPQ=44;MATEID=36513:2;MATENM=4;NM=1;NUMPARTS=2;SCTG=c_1_147637001_147662001_6C;SPAN=321;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:45:17:17,0,96.2:9:2:-17.06:20.24\n1\t147653211\t36513:2\tA\tA[1:147652890[\t17\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=GATCTCGGCTCACTGCAA;MAPQ=60;MATEID=36513:1;MATENM=1;NM=4;NUMPARTS=2;SCTG=c_1_147637001_147662001_6C;SPAN=321;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:45:17:17,0,96.2:9:2:-17.06:20.24\n1\t148070222\t36638:2\tT\tT[1:145815067[\t20\tPASS\tDISC_MAPQ=41;EVDNC=DSCRD;IMPRECISE;MAPQ=41;MATEID=36638:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:145815067(-)-1:148070222(+)__1_148053501_148078501D;SPAN=2255155;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:23:20:20,0,36.5:0:8:-19.94:20.25\n1\t150621245\t295608:1\tC\t[5:56152290[C\t26\tPASS\tDISC_MAPQ=51;EVDNC=DSCRD;IMPRECISE;MAPQ=51;MATEID=295608:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:150621245(-)-5:56152290(-)__5_56129501_56154501D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:12:3.2:26.3,0,3.2:0:9:-27.29:27.29\n1\t150718975\t37741:1\tT\tT[1:150719294[\t99\tPASS\tEVDNC=ASSMB;HOMSEQ=AGAATTCTCAATTAAT;MAPQ=60;MATEID=37741:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_150699501_150724501_40C;SPAN=319;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:53:35:14.7:161.7,14.7,0:53:0:-161.7:161.7\n1\t150719294\t37741:2\tA\t]1:150718975]A\t99\tPASS\tEVDNC=ASSMB;HOMSEQ=AGAATTCTCAATTAAT;MAPQ=60;MATEID=37741:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_150699501_150724501_40C;SPAN=319;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:53:35:14.7:161.7,14.7,0:53:0:-161.7:161.7\n1\t151211760\t38014:1\tC\tC[1:151212045[\t0\tPASS\tEVDNC=ASSMB;HOMSEQ=GAGCTTGCAGTGAGCCAAGATC;MAPQ=60;MATEID=38014:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_151189501_151214501_60C;SPAN=285;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/0:4:55:2.1:0,2.1,141.9:4:0:2.256:7.112\n1\t151212045\t38014:2\tG\t]1:151211760]G\t0\tPASS\tEVDNC=ASSMB;HOMSEQ=GAGCTTGCAGTGAGCCAAGATC;MAPQ=60;MATEID=38014:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_151189501_151214501_60C;SPAN=285;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/0:4:55:2.1:0,2.1,141.9:4:0:2.256:7.112\n1\t151938858\t38348:1\tT\tT[1:151939885[\t10\tPASS\tEVDNC=ASSMB;HOMSEQ=CT;MAPQ=60;MATEID=38348:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_151924501_151949501_25C;SPAN=1027;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:69:10.4:10.4,0,162.2:9:0:-10.31:18.4\n1\t151939885\t38348:2\tC\t]1:151938858]C\t10\tPASS\tEVDNC=ASSMB;HOMSEQ=CT;MAPQ=60;MATEID=38348:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_151924501_151949501_25C;SPAN=1027;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:69:10.4:10.4,0,162.2:9:0:-10.31:18.4\n1\t151974841\t38399:1\tG\t]1:152087871]G\t26\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=38399:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:151974841(-)-1:152087871(+)__1_152071501_152096501D;SPAN=113030;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:25:26:26,0,35.9:0:10:-25.98:26.09\n1\t152087871\t38399:2\tT\tT[1:151974841[\t26\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=38399:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:151974841(-)-1:152087871(+)__1_152071501_152096501D;SPAN=113030;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:25:26:26,0,35.9:0:10:-25.98:26.09\n1\t152213285\t38428:1\tA\tA[1:152214664[\t99\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=GAGCCAGACCCATGTTGGCCGTAGCTGGAAGA;MAPQ=60;MATEID=38428:2;MATENM=0;NM=3;NUMPARTS=2;SCTG=c_1_152194001_152219001_88C;SPAN=1379;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:46:157:99:107.9,0,286.1:30:17:-107.7:112.3\n1\t152214664\t38428:2\tG\t]1:152213285]G\t99\tPASS\tDISC_MAPQ=0;EVDNC=ASDIS;HOMSEQ=GAGCCAGACCCATGTTGGCCGTAGCTGGAAGA;MAPQ=60;MATEID=38428:1;MATENM=3;NM=0;NUMPARTS=2;SCTG=c_1_152194001_152219001_88C;SPAN=1379;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:46:157:99:107.9,0,286.1:30:17:-107.7:112.3\n1\t152583177\t38584:1\tG\tG[1:152615264[\t99\tPASS\tDISC_MAPQ=52;EVDNC=DSCRD;IMPRECISE;MAPQ=52;MATEID=38584:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:152583177(+)-1:152615264(-)__1_152610501_152635501D;SPAN=32087;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:33:4:9:99,9,0:0:33:-99.02:99.02\n1\t152615264\t38584:2\tT\t]1:152583177]T\t99\tPASS\tDISC_MAPQ=16;EVDNC=DSCRD;IMPRECISE;MAPQ=16;MATEID=38584:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:152583177(+)-1:152615264(-)__1_152610501_152635501D;SPAN=32087;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:33:4:9:99,9,0:0:33:-99.02:99.02\n1\t153070710\t38737:1\tG\tG[1:153093702[\t23\tPASS\tDISC_MAPQ=45;EVDNC=DSCRD;IMPRECISE;MAPQ=45;MATEID=38737:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:153070710(+)-1:153093702(-)__1_153051501_153076501D;SPAN=22992;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:10:0.5:23.6,0,0.5:0:8:-24.74:24.74\n1\t153071239\t38741:1\tG\t]1:153094217]G\t19\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=38741:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:153071239(-)-1:153094217(+)__1_153076001_153101001D;SPAN=22978;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:24:19.7:19.7,0,39.5:0:8:-19.66:20.07\n1\t153093702\t38737:2\tA\t]1:153070710]A\t23\tPASS\tDISC_MAPQ=44;EVDNC=DSCRD;IMPRECISE;MAPQ=44;MATEID=38737:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:153070710(+)-1:153093702(-)__1_153051501_153076501D;SPAN=22992;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:10:0.5:23.6,0,0.5:0:8:-24.74:24.74\n1\t153094217\t38741:2\tG\tG[1:153071239[\t19\tPASS\tDISC_MAPQ=55;EVDNC=DSCRD;IMPRECISE;MAPQ=55;MATEID=38741:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:153071239(-)-1:153094217(+)__1_153076001_153101001D;SPAN=22978;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:24:19.7:19.7,0,39.5:0:8:-19.66:20.07\n1\t153161232\t38758:1\tA\tA[1:153161488[\t99\tPASS\tEVDNC=ASSMB;HOMSEQ=TA;MAPQ=60;MATEID=38758:2;MATENM=4;NM=0;NUMPARTS=2;SCTG=c_1_153149501_153174501_38C;SPAN=256;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:39:17:10.8:118.8,10.8,0:39:0:-118.8:118.8\n1\t153161488\t38758:2\tT\t]1:153161232]T\t99\tPASS\tEVDNC=ASSMB;HOMSEQ=TA;MAPQ=60;MATEID=38758:1;MATENM=0;NM=4;NUMPARTS=2;SCTG=c_1_153149501_153174501_38C;SPAN=256;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:39:17:10.8:118.8,10.8,0:39:0:-118.8:118.8\n1\t154713957\t39323:1\tC\t]1:154714620]C\t44\tPASS\tDISC_MAPQ=32;EVDNC=DSCRD;IMPRECISE;MAPQ=32;MATEID=39323:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:154713957(-)-1:154714620(+)__1_154693001_154718001D;SPAN=663;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:17:40:44.9:44.9,0,54.8:0:17:-44.87:44.94\n1\t154714620\t39323:2\tT\tT[1:154713957[\t44\tPASS\tDISC_MAPQ=21;EVDNC=DSCRD;IMPRECISE;MAPQ=21;MATEID=39323:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:154713957(-)-1:154714620(+)__1_154693001_154718001D;SPAN=663;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:17:40:44.9:44.9,0,54.8:0:17:-44.87:44.94\n1\t155147370\t39479:1\tA\t]1:155147439]A\t78\tPASS\tDISC_MAPQ=255;EVDNC=TSI_G;HOMSEQ=AATAGATACATATTTAAATATGTAT;INSERTION=AATATGTATCTATTTAATAGATACATATATATGTATCTATTTAATAGATACATATATATGTATCTATTTAATAGATACATAAATATGTATCTATTTAATAGATACATATTTAAGTATCTATTT;MAPQ=60;MATEID=39479:2;MATENM=4;NM=4;NUMPARTS=4;SCTG=c_1_155134001_155159001_119C;SPAN=69;SUBN=2;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:29:62:75.2:78.5,0,75.2:29:0:-78.3:78.3\n1\t155147439\t39479:2\tA\tA[1:155147370[\t78\tPASS\tDISC_MAPQ=255;EVDNC=TSI_G;HOMSEQ=AATAGATACATATTTAAATATGTAT;INSERTION=AATATGTATCTATTTAATAGATACATATATATGTATCTATTTAATAGATACATATATATGTATCTATTTAATAGATACATAAATATGTATCTATTTAATAGATACATATTTAAGTATCTATTT;MAPQ=60;MATEID=39479:1;MATENM=4;NM=4;NUMPARTS=4;SCTG=c_1_155134001_155159001_119C;SPAN=69;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:29:62:75.2:78.5,0,75.2:29:0:-78.3:78.3\n1\t155531284\t39855:1\tG\t]1:156495760]G\t33\tPASS\tEVDNC=ASSMB;HOMSEQ=G;MAPQ=60;MATEID=39855:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_1_156481501_156506501_9C;SPAN=964476;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:11:11:3:33,3,0:11:0:-33.01:33.01\n1\t156495760\t39855:2\tG\tG[1:155531284[\t33\tPASS\tEVDNC=ASSMB;HOMSEQ=G;MAPQ=60;MATEID=39855:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_1_156481501_156506501_9C;SPAN=964476;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:11:11:3:33,3,0:11:0:-33.01:33.01\n1\t156556931\t39879:1\tC\tC[1:156559144[\t46\tPASS\tEVDNC=ASSMB;HOMSEQ=AGAAATTGAGTAGCTCAGC;MAPQ=60;MATEID=39879:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_1_156555001_156580001_74C;SPAN=2213;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:16:16:4.2:46.2,4.2,0:16:0:-46.21:46.21\n1\t156559144\t39879:2\tA\t]1:156556931]A\t46\tPASS\tEVDNC=ASSMB;HOMSEQ=AGAAATTGAGTAGCTCAGC;MAPQ=60;MATEID=39879:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_1_156555001_156580001_74C;SPAN=2213;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:16:16:4.2:46.2,4.2,0:16:0:-46.21:46.21\n1\t157204074\t40074:1\tA\tA[1:157205607[\t23\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;INSERTION=TTTTATCAAATTT;MAPQ=60;MATEID=40074:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_157192001_157217001_10C;SPAN=1533;SUBN=5;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:21:23.9:23.9,0,27.2:6:5:-23.81:23.84\n1\t157205607\t40074:2\tA\t]1:157204074]A\t23\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;INSERTION=TTTTATCAAATTT;MAPQ=60;MATEID=40074:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_157192001_157217001_10C;SPAN=1533;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:21:23.9:23.9,0,27.2:6:5:-23.81:23.84\n1\t157570871\t40199:1\tA\tA[1:157571087[\t21\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=40199:2;MATENM=1;NM=2;NUMPARTS=2;SCTG=c_1_157559501_157584501_117C;SPAN=216;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:17:18.5:21.8,0,18.5:8:0:-21.63:21.63\n1\t157571087\t40199:2\tT\t]1:157570871]T\t21\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=40199:1;MATENM=2;NM=1;NUMPARTS=2;SCTG=c_1_157559501_157584501_117C;SPAN=216;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:17:18.5:21.8,0,18.5:8:0:-21.63:21.63\n1\t157699943\t318970:1\tA\tA[5:169468974[\t28\tPASS\tEVDNC=ASSMB;HOMSEQ=A;MAPQ=60;MATEID=318970:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_5_169466501_169491501_22C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:15:8.9:28.7,0,8.9:10:0:-29.37:29.37\n1\t158108318\t46063:1\tC\t[1:178946978[C\t95\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=CA;MAPQ=60;MATEID=46063:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_1_178923501_178948501_7C;SPAN=20838660;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:32:19:8.7:95.7,8.7,0:17:19:-95.72:95.72\n1\t158441289\t45917:1\tA\tA]1:178096153]\t37\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=45917:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:158441289(+)-1:178096153(+)__1_178090501_178115501D;SPAN=19654864;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:20:11:37.4,0,11:0:13:-37.93:37.93\n1\t158991664\t40561:1\tA\tA[1:158996411[\t46\tPASS\tDISC_MAPQ=50;EVDNC=DSCRD;IMPRECISE;MAPQ=50;MATEID=40561:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:158991664(+)-1:158996411(-)__1_158980501_159005501D;SPAN=4747;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:15:3:4.2:46.2,4.2,0:0:15:-46.21:46.21\n1\t158996411\t40561:2\tT\t]1:158991664]T\t46\tPASS\tDISC_MAPQ=55;EVDNC=DSCRD;IMPRECISE;MAPQ=55;MATEID=40561:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:158991664(+)-1:158996411(-)__1_158980501_159005501D;SPAN=4747;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:15:3:4.2:46.2,4.2,0:0:15:-46.21:46.21\n1\t159050757\t40583:1\tT\tT[1:159051098[\t95\tPASS\tDISC_MAPQ=255;EVDNC=TSI_L;INSERTION=GTCCCCTCCCGCCTAATTTTTCACGTCCATGACTCTTTTTAGTTCCTGCCATTATTCAGATTGGAGAGCCTCTAACCTGGGCCCCTTCAGATTAGGAAAGTTTGTGGAGTCTTCCAGTGGCTGCCTTAATGATGTTTTTGCAACATAGTGCTGCTTCATTAGAAAGGGCTTTGCAATTTGGTTCTTTAAAATGCCCCTATCTACTAGAATGAGTTCCAACTGAAATCTCATGAAATCTAAGGTTTGTGGTTGAGACTATTCCTTACTCTGAATGCTAGTAATATGATTTTTTTCTCTATTTTTATTTTATTTGGTCACTGTCATATTAGGCAGGAGGGA;MAPQ=60;MATEID=40583:2;MATENM=6;NM=6;NUMPARTS=3;SCTG=c_1_159029501_159054501_5C;SPAN=341;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:32:21:8.7:95.7,8.7,0:32:0:-95.72:95.72\n1\t159051098\t40583:2\tT\t]1:159050757]T\t95\tPASS\tDISC_MAPQ=255;EVDNC=TSI_L;INSERTION=GTCCCCTCCCGCCTAATTTTTCACGTCCATGACTCTTTTTAGTTCCTGCCATTATTCAGATTGGAGAGCCTCTAACCTGGGCCCCTTCAGATTAGGAAAGTTTGTGGAGTCTTCCAGTGGCTGCCTTAATGATGTTTTTGCAACATAGTGCTGCTTCATTAGAAAGGGCTTTGCAATTTGGTTCTTTAAAATGCCCCTATCTACTAGAATGAGTTCCAACTGAAATCTCATGAAATCTAAGGTTTGTGGTTGAGACTATTCCTTACTCTGAATGCTAGTAATATGATTTTTTTCTCTATTTTTATTTTATTTGGTCACTGTCATATTAGGCAGGAGGGA;MAPQ=60;MATEID=40583:1;MATENM=6;NM=6;NUMPARTS=3;SCTG=c_1_159029501_159054501_5C;SPAN=341;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:32:21:8.7:95.7,8.7,0:32:0:-95.72:95.72\n1\t161481848\t41076:1\tG\tG[1:161487634[\t25\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=41076:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:161481848(+)-1:161487634(-)__1_161479501_161504501D;SPAN=5786;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:14:9.2:25.7,0,9.2:0:9:-26.19:26.19\n1\t161487634\t41076:2\tA\t]1:161481848]A\t25\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=41076:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:161481848(+)-1:161487634(-)__1_161479501_161504501D;SPAN=5786;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:14:9.2:25.7,0,9.2:0:9:-26.19:26.19\n1\t165582917\t42054:1\tT\tT[1:165583115[\t39\tPASS\tDISC_MAPQ=255;EVDNC=TSI_L;HOMSEQ=TATGTGTATACATATACACATATATGT;MAPQ=60;MATEID=42054:2;MATENM=0;NM=5;NUMPARTS=3;REPSEQ=TGTG;SCTG=c_1_165571001_165596001_23C;SPAN=198;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:13:7:3.6:39.6,3.6,0:13:0:-39.61:39.61\n1\t165583115\t42054:2\tT\t]1:165582917]T\t39\tPASS\tDISC_MAPQ=255;EVDNC=TSI_L;HOMSEQ=TATGTGTATACATATACACATATATGT;MAPQ=60;MATEID=42054:1;MATENM=5;NM=0;NUMPARTS=3;REPSEQ=TGTG;SCTG=c_1_165571001_165596001_23C;SPAN=198;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:13:7:3.6:39.6,3.6,0:13:0:-39.61:39.61\n1\t166564699\t42673:1\tA\t[1:168370833[A\t49\tPASS\tDISC_MAPQ=51;EVDNC=ASDIS;HOMSEQ=A;MAPQ=60;MATEID=42673:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_168364001_168389001_45C;SPAN=1806134;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:16:17:4.5:49.5,4.5,0:15:7:-49.51:49.51\n1\t167056589\t42402:1\tA\t]1:167057025]A\t44\tPASS\tDISC_MAPQ=29;EVDNC=DSCRD;IMPRECISE;MAPQ=29;MATEID=42402:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:167056589(-)-1:167057025(+)__1_167041001_167066001D;SPAN=436;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:17:41:44.6:44.6,0,57.8:0:17:-44.59:44.7\n1\t167057025\t42402:2\tG\tG[1:167056589[\t44\tPASS\tDISC_MAPQ=19;EVDNC=DSCRD;IMPRECISE;MAPQ=19;MATEID=42402:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:167056589(-)-1:167057025(+)__1_167041001_167066001D;SPAN=436;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:17:41:44.6:44.6,0,57.8:0:17:-44.59:44.7\n1\t167120498\t861891:1\tA\tA[20:6681439[\t62\tPASS\tEVDNC=ASSMB;HOMSEQ=A;MAPQ=60;MATEID=861891:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_6664001_6689001_24C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:21:17:5.7:62.7,5.7,0:21:0:-62.72:62.72\n1\t168370833\t42673:2\tT\t[1:166564699[T\t49\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=A;MAPQ=60;MATEID=42673:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_168364001_168389001_45C;SPAN=1806134;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:16:17:4.5:49.5,4.5,0:15:7:-49.51:49.51\n1\t168543261\t42725:1\tC\t[1:168578878[C\t21\tPASS\tDISC_MAPQ=22;EVDNC=DSCRD;IMPRECISE;MAPQ=22;MATEID=42725:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:168543261(-)-1:168578878(-)__1_168560001_168585001D;SPAN=35617;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:18:21.5:21.5,0,21.5:0:8:-21.35:21.36\n1\t168543770\t42721:1\tT\t[1:168576851[T\t22\tPASS\tDISC_MAPQ=46;EVDNC=DSCRD;IMPRECISE;MAPQ=46;MATEID=42721:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:168543770(-)-1:168576851(-)__1_168535501_168560501D;SPAN=33081;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:16:15.5:22.1,0,15.5:0:8:-21.93:21.93\n1\t168576851\t42721:2\tC\t[1:168543770[C\t22\tPASS\tDISC_MAPQ=36;EVDNC=DSCRD;IMPRECISE;MAPQ=36;MATEID=42721:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:168543770(-)-1:168576851(-)__1_168535501_168560501D;SPAN=33081;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:16:15.5:22.1,0,15.5:0:8:-21.93:21.93\n1\t168578878\t42725:2\tC\t[1:168543261[C\t21\tPASS\tDISC_MAPQ=58;EVDNC=DSCRD;IMPRECISE;MAPQ=58;MATEID=42725:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:168543261(-)-1:168578878(-)__1_168560001_168585001D;SPAN=35617;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:18:21.5:21.5,0,21.5:0:8:-21.35:21.36\n1\t169035123\t42878:1\tG\tG[1:169035992[\t47\tPASS\tEVDNC=ASSMB;HOMSEQ=TGG;MAPQ=60;MATEID=42878:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_1_169025501_169050501_100C;SPAN=869;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:17:32:30.8:47.3,0,30.8:17:0:-47.25:47.25\n1\t169035992\t42878:2\tT\t]1:169035123]T\t47\tPASS\tEVDNC=ASSMB;HOMSEQ=TGG;MAPQ=60;MATEID=42878:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_1_169025501_169050501_100C;SPAN=869;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:17:32:30.8:47.3,0,30.8:17:0:-47.25:47.25\n1\t169190799\t42950:1\tT\tT[1:169191112[\t32\tPASS\tEVDNC=ASSMB;HOMSEQ=GCAAGTGAACTGTTTCT;MAPQ=60;MATEID=42950:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_169172501_169197501_174C;SPAN=313;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:25:29.3:32.6,0,29.3:12:0:-32.59:32.59\n1\t169191112\t42950:2\tG\t]1:169190799]G\t32\tPASS\tEVDNC=ASSMB;HOMSEQ=GCAAGTGAACTGTTTCT;MAPQ=60;MATEID=42950:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_169172501_169197501_174C;SPAN=313;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:25:29.3:32.6,0,29.3:12:0:-32.59:32.59\n1\t169993658\t43328:1\tT\t]1:169993838]T\t74\tPASS\tEVDNC=ASSMB;HOMSEQ=TTGCAGTGAGCCCAGAT;MAPQ=60;MATEID=43328:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_1_169981001_170006001_70C;SPAN=180;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:26:41:28.1:74.3,0,28.1:26:0:-75.39:75.39\n1\t169993838\t43328:2\tT\tT[1:169993658[\t74\tPASS\tEVDNC=ASSMB;HOMSEQ=TTGCAGTGAGCCCAGAT;MAPQ=60;MATEID=43328:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_1_169981001_170006001_70C;SPAN=180;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:26:41:28.1:74.3,0,28.1:26:0:-75.39:75.39\n1\t171021024\t43754:1\tA\t]1:171030867]A\t21\tPASS\tDISC_MAPQ=54;EVDNC=DSCRD;IMPRECISE;MAPQ=54;MATEID=43754:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:171021024(-)-1:171030867(+)__1_171010001_171035001D;SPAN=9843;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:40:21.8:21.8,0,77.9:0:10:-21.77:23.59\n1\t171030867\t43754:2\tA\tA[1:171021024[\t21\tPASS\tDISC_MAPQ=56;EVDNC=DSCRD;IMPRECISE;MAPQ=56;MATEID=43754:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:171021024(-)-1:171030867(+)__1_171010001_171035001D;SPAN=9843;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:40:21.8:21.8,0,77.9:0:10:-21.77:23.59\n1\t171547927\t43910:1\tA\tA[1:171548217[\t3\tPASS\tEVDNC=ASSMB;HOMSEQ=CCTTGGCCTCCCAAAGTGCTGGGATTA;MAPQ=60;MATEID=43910:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_171524501_171549501_63C;SPAN=290;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:5:47:3.5:3.5,0,112.4:5:0:-3.294:9.753\n1\t171548217\t43910:2\tC\t]1:171547927]C\t3\tPASS\tEVDNC=ASSMB;HOMSEQ=CCTTGGCCTCCCAAAGTGCTGGGATTA;MAPQ=60;MATEID=43910:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_171524501_171549501_63C;SPAN=290;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:5:47:3.5:3.5,0,112.4:5:0:-3.294:9.753\n1\t173886819\t44589:1\tA\t]1:173897273]A\t59\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=44589:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_173876501_173901501_80C;SPAN=10454;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:22:47:56.3:59.6,0,56.3:22:0:-59.41:59.41\n1\t173897273\t44589:2\tG\tG[1:173886819[\t59\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=44589:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_173876501_173901501_80C;SPAN=10454;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:22:47:56.3:59.6,0,56.3:22:0:-59.41:59.41\n1\t174178577\t44791:1\tG\t]1:174384561]G\t18\tPASS\tEVDNC=ASSMB;HOMSEQ=GA;MAPQ=60;MATEID=44791:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_1_174366501_174391501_27C;SPAN=205984;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:28:18.5:18.5,0,51.5:8:0:-18.54:19.42\n1\t174319638\t44748:1\tA\t]1:174320886]A\t4\tPASS\tDISC_MAPQ=34;EVDNC=ASDIS;HOMSEQ=AG;MAPQ=60;MATEID=44748:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_1_174317501_174342501_30C;SPAN=1248;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:6:55:4.4:4.4,0,133.1:3:6:-4.346:11.77\n1\t174320886\t44748:2\tG\tG[1:174319638[\t4\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AG;MAPQ=60;MATEID=44748:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_1_174317501_174342501_30C;SPAN=1248;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:6:55:4.4:4.4,0,133.1:3:6:-4.346:11.77\n1\t174384561\t44791:2\tA\tA[1:174178577[\t18\tPASS\tEVDNC=ASSMB;HOMSEQ=GA;MAPQ=60;MATEID=44791:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_1_174366501_174391501_27C;SPAN=205984;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:28:18.5:18.5,0,51.5:8:0:-18.54:19.42\n1\t174937737\t999349:1\tC\t[Un_JTFH01000855v1_decoy:1[C\t85\tPASS\tEVDNC=ASSMB;HOMSEQ=GCCAGCCTGGG;INSERTION=AAAATTAGCTGGGTCTGGTGGCACATG;MAPQ=60;MATEID=999349:2;MATENM=1;NM=1;NUMPARTS=9;SCTG=c_1698_1_1088_0C;SECONDARY;SPAN=-1;SUBN=1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:28:9:7.8:85.8,7.8,0:28:0:-85.82:85.82\n1\t175231392\t45123:1\tT\tT]1:175232880]\t20\tPASS\tDISC_MAPQ=31;EVDNC=DSCRD;IMPRECISE;MAPQ=31;MATEID=45123:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:175231392(+)-1:175232880(+)__1_175224001_175249001D;SPAN=1488;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:43:20.9:20.9,0,86.9:0:10:-20.92:23.23\n1\t175232880\t45123:2\tG\tG]1:175231392]\t20\tPASS\tDISC_MAPQ=57;EVDNC=DSCRD;IMPRECISE;MAPQ=57;MATEID=45123:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:175231392(+)-1:175232880(+)__1_175224001_175249001D;SPAN=1488;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:43:20.9:20.9,0,86.9:0:10:-20.92:23.23\n1\t178095595\t45920:1\tA\t]1:178102057]A\t34\tPASS\tEVDNC=ASSMB;HOMSEQ=ATG;MAPQ=60;MATEID=45920:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_1_178090501_178115501_73C;SPAN=6462;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:41:34.7:34.7,0,67.7:14:0:-34.69:35.3\n1\t178096153\t45917:2\tT\tT]1:158441289]\t37\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=45917:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:158441289(+)-1:178096153(+)__1_178090501_178115501D;SPAN=19654864;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:20:11:37.4,0,11:0:13:-37.93:37.93\n1\t178102057\t45920:2\tG\tG[1:178095595[\t34\tPASS\tEVDNC=ASSMB;HOMSEQ=ATG;MAPQ=60;MATEID=45920:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_1_178090501_178115501_73C;SPAN=6462;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:41:34.7:34.7,0,67.7:14:0:-34.69:35.3\n1\t178946978\t46063:2\tT\t[1:158108318[T\t95\tPASS\tDISC_MAPQ=56;EVDNC=ASDIS;HOMSEQ=CA;MAPQ=60;MATEID=46063:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_1_178923501_178948501_7C;SPAN=20838660;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:32:19:8.7:95.7,8.7,0:17:19:-95.72:95.72\n1\t179261094\t46195:1\tC\t]1:179301500]C\t14\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;INSERTION=CTCTTGGGCACA;MAPQ=60;MATEID=46195:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_179291001_179316001_27C;SPAN=40406;SUBN=3;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:6:20:14.3:14.3,0,34.1:3:4:-14.18:14.72\n1\t179301500\t46195:2\tG\tG[1:179261094[\t14\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;INSERTION=CTCTTGGGCACA;MAPQ=60;MATEID=46195:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_179291001_179316001_27C;SPAN=40406;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:6:20:14.3:14.3,0,34.1:3:4:-14.18:14.72\n1\t179638146\t46431:1\tA\tA[1:179638925[\t41\tPASS\tEVDNC=ASSMB;INSERTION=TCGTGGGTAAA;MAPQ=60;MATEID=46431:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_179634001_179659001_25C;SPAN=779;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:15:27:25.4:41.9,0,25.4:15:0:-42.12:42.12\n1\t179638925\t46431:2\tT\t]1:179638146]T\t41\tPASS\tEVDNC=ASSMB;INSERTION=TCGTGGGTAAA;MAPQ=60;MATEID=46431:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_179634001_179659001_25C;SPAN=779;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:15:27:25.4:41.9,0,25.4:15:0:-42.12:42.12\n1\t181698030\t47398:1\tG\tG[1:182409037[\t75\tPASS\tEVDNC=ASSMB;HOMSEQ=G;MAPQ=60;MATEID=47398:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_182402501_182427501_9C;SPAN=711007;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:25:12:6.9:75.9,6.9,0:25:0:-75.92:75.92\n1\t182409037\t47398:2\tG\t]1:181698030]G\t75\tPASS\tEVDNC=ASSMB;HOMSEQ=G;MAPQ=60;MATEID=47398:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_182402501_182427501_9C;SPAN=711007;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:25:12:6.9:75.9,6.9,0:25:0:-75.92:75.92\n1\t182451352\t47412:1\tG\t]1:182451475]G\t41\tPASS\tEVDNC=ASSMB;HOMSEQ=GAG;MAPQ=60;MATEID=47412:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_182427001_182452001_78C;SPAN=123;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:17:54:41:41,0,93.8:17:0:-40.94:42.13\n1\t182451475\t47412:2\tG\tG[1:182451352[\t41\tPASS\tEVDNC=ASSMB;HOMSEQ=GAG;MAPQ=60;MATEID=47412:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_182427001_182452001_78C;SPAN=123;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:17:54:41:41,0,93.8:17:0:-40.94:42.13\n1\t184309605\t47956:1\tG\tG[1:184309908[\t82\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AAGAAACTCTGATG;MAPQ=60;MATEID=47956:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_184289001_184314001_97C;SPAN=303;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:27:22:7.5:82.5,7.5,0:22:6:-82.52:82.52\n1\t184309908\t47956:2\tA\t]1:184309605]A\t82\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AAGAAACTCTGATG;MAPQ=60;MATEID=47956:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_184289001_184314001_97C;SPAN=303;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:27:22:7.5:82.5,7.5,0:22:6:-82.52:82.52\n1\t184845698\t48124:1\tT\tT[1:184851643[\t85\tPASS\tDISC_MAPQ=59;EVDNC=DSCRD;IMPRECISE;MAPQ=59;MATEID=48124:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:184845698(+)-1:184851643(-)__1_184828001_184853001D;SPAN=5945;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:28:10:7.8:85.8,7.8,0:0:28:-85.82:85.82\n1\t184851643\t48124:2\tT\t]1:184845698]T\t85\tPASS\tDISC_MAPQ=58;EVDNC=DSCRD;IMPRECISE;MAPQ=58;MATEID=48124:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:184845698(+)-1:184851643(-)__1_184828001_184853001D;SPAN=5945;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:28:10:7.8:85.8,7.8,0:0:28:-85.82:85.82\n1\t185403974\t48241:1\tC\tC[1:185404303[\t79\tPASS\tEVDNC=ASSMB;HOMSEQ=CCCAAGATTC;MAPQ=60;MATEID=48241:2;MATENM=7;NM=0;NUMPARTS=2;SCTG=c_1_185391501_185416501_69C;SPAN=329;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:26:26:7.2:79.2,7.2,0:26:0:-79.22:79.22\n1\t185404303\t48241:2\tC\t]1:185403974]C\t79\tPASS\tEVDNC=ASSMB;HOMSEQ=CCCAAGATTC;MAPQ=60;MATEID=48241:1;MATENM=0;NM=7;NUMPARTS=2;SCTG=c_1_185391501_185416501_69C;SPAN=329;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:26:26:7.2:79.2,7.2,0:26:0:-79.22:79.22\n1\t187495696\t48778:1\tT\tT[1:187497598[\t99\tPASS\tDISC_MAPQ=255;EVDNC=TSI_G;HOMSEQ=CCT;INSERTION=AATATGCTTTCTGTTTTTGGGTGTCACTCTCAATTTTTTTGAAACAATACATTTTTCCGTCTTACTTTAATTCATCCCTTGTCATCCATTTCTCATCCATTACATTCTAGCATTCATATCTATCCCTTCCCCACTGAAATCGATCTCACTAAGTCACTGATGTTCCCAAGTTTTTAACACAAGTTTCTGTCTTTGGTTTTCAGCCTAATTTTTTAGATATTACTACCAATAGAATGGTCTCCTGGATTT;MAPQ=60;MATEID=48778:2;MATENM=0;NM=3;NUMPARTS=3;SCTG=c_1_187474001_187499001_33C;SPAN=1902;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:75:28:21:231,21,0:75:0:-231.1:231.1\n1\t187495696\t48777:1\tT\tT]1:187497595]\t99\tPASS\tDISC_MAPQ=60;EVDNC=TSI_L;MAPQ=60;MATEID=48777:2;MATENM=0;NM=3;NUMPARTS=3;REPSEQ=ATAT;SCTG=c_1_187474001_187499001_33C;SPAN=1899;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:57:29:15.9:174.9,15.9,0:48:16:-174.9:174.9\n1\t187497344\t48780:1\tA\t[1:187497598[A\t95\tPASS\tDISC_MAPQ=255;EVDNC=TSI_L;HOMSEQ=CCT;MAPQ=60;MATEID=48780:2;MATENM=0;NM=0;NUMPARTS=3;SCTG=c_1_187474001_187499001_33C;SPAN=254;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:32:26:8.7:95.7,8.7,0:32:0:-95.72:95.72\n1\t187497595\t48777:2\tT\tT]1:187495696]\t99\tPASS\tDISC_MAPQ=60;EVDNC=TSI_L;MAPQ=60;MATEID=48777:1;MATENM=3;NM=0;NUMPARTS=3;REPSEQ=ATAT;SCTG=c_1_187474001_187499001_33C;SPAN=1899;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:57:29:15.9:174.9,15.9,0:48:16:-174.9:174.9\n1\t187497598\t48780:2\tC\t[1:187497344[C\t95\tPASS\tDISC_MAPQ=255;EVDNC=TSI_L;HOMSEQ=CCT;MAPQ=60;MATEID=48780:1;MATENM=0;NM=0;NUMPARTS=3;SCTG=c_1_187474001_187499001_33C;SPAN=254;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:32:26:8.7:95.7,8.7,0:32:0:-95.72:95.72\n1\t187497598\t48778:2\tC\t]1:187495696]C\t99\tPASS\tDISC_MAPQ=255;EVDNC=TSI_G;HOMSEQ=CCT;INSERTION=AATATGCTTTCTGTTTTTGGGTGTCACTCTCAATTTTTTTGAAACAATACATTTTTCCGTCTTACTTTAATTCATCCCTTGTCATCCATTTCTCATCCATTACATTCTAGCATTCATATCTATCCCTTCCCCACTGAAATCGATCTCACTAAGTCACTGATGTTCCCAAGTTTTTAACACAAGTTTCTGTCTTTGGTTTTCAGCCTAATTTTTTAGATATTACTACCAATAGAATGGTCTCCTGGATTT;MAPQ=60;MATEID=48778:1;MATENM=3;NM=0;NUMPARTS=3;SCTG=c_1_187474001_187499001_33C;SPAN=1902;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:75:28:21:231,21,0:75:0:-231.1:231.1\n1\t187746975\t48909:1\tA\tA[1:187753402[\t59\tPASS\tEVDNC=ASSMB;HOMSEQ=GA;MAPQ=60;MATEID=48909:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_187743501_187768501_130C;SPAN=6427;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:21:35:26.6:59.6,0,26.6:21:0:-60.07:60.07\n1\t187753402\t48909:2\tG\t]1:187746975]G\t59\tPASS\tEVDNC=ASSMB;HOMSEQ=GA;MAPQ=60;MATEID=48909:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_187743501_187768501_130C;SPAN=6427;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:21:35:26.6:59.6,0,26.6:21:0:-60.07:60.07\n1\t188015229\t49018:1\tC\t]1:188029002]C\t33\tPASS\tDISC_MAPQ=58;EVDNC=DSCRD;IMPRECISE;MAPQ=58;MATEID=49018:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:188015229(-)-1:188029002(+)__1_188013001_188038001D;SPAN=13773;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:47:33.2:33.2,0,82.7:0:14:-33:34.28\n1\t188029002\t49018:2\tA\tA[1:188015229[\t33\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=49018:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:188015229(-)-1:188029002(+)__1_188013001_188038001D;SPAN=13773;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:47:33.2:33.2,0,82.7:0:14:-33:34.28\n1\t188086594\t805051:1\tG\t[17:44048921[G\t49\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;INSERTION=AGC;MAPQ=60;MATEID=805051:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_17_44026501_44051501_18C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:17:15:4.5:49.5,4.5,0:13:9:-49.51:49.51\n1\t188238750\t49140:1\tT\tT[1:188238972[\t99\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;INSERTION=AAAATATAAAATATATATATATAAA;MAPQ=60;MATEID=49140:2;MATENM=2;NM=1;NUMPARTS=2;SCTG=c_1_188233501_188258501_22C;SPAN=222;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:33:12:9:99,9,0:29:4:-99.02:99.02\n1\t188238972\t49140:2\tA\t]1:188238750]A\t99\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;INSERTION=AAAATATAAAATATATATATATAAA;MAPQ=60;MATEID=49140:1;MATENM=1;NM=2;NUMPARTS=2;SCTG=c_1_188233501_188258501_22C;SPAN=222;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:33:12:9:99,9,0:29:4:-99.02:99.02\n1\t190868192\t50402:1\tT\tT[1:190868361[\t60\tPASS\tEVDNC=ASSMB;HOMSEQ=ATT;MAPQ=60;MATEID=50402:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_1_190855001_190880001_71C;SPAN=169;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:21:30:14.6:60.8,0,14.6:21:0:-62.47:62.47\n1\t190868361\t50402:2\tA\t]1:190868192]A\t60\tPASS\tEVDNC=ASSMB;HOMSEQ=ATT;MAPQ=60;MATEID=50402:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_1_190855001_190880001_71C;SPAN=169;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:21:30:14.6:60.8,0,14.6:21:0:-62.47:62.47\n1\t192830145\t51140:1\tA\tA]1:193074178]\t82\tPASS\tDISC_MAPQ=39;EVDNC=ASDIS;HOMSEQ=TTCACAATAGCAAAGACTTGGAACCA;MAPQ=43;MATEID=51140:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_192815001_192840001_40C;SPAN=244033;SUBN=2;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:27:13:7.5:82.5,7.5,0:16:13:-82.52:82.52\n1\t193074178\t51140:2\tA\tA]1:192830145]\t82\tPASS\tDISC_MAPQ=9;EVDNC=ASDIS;HOMSEQ=TTCACAATAGCAAAGACTTGGAACCA;MAPQ=31;MATEID=51140:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_192815001_192840001_40C;SPAN=244033;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:27:13:7.5:82.5,7.5,0:16:13:-82.52:82.52\n1\t195115153\t51946:1\tA\t]1:195115296]A\t75\tPASS\tEVDNC=ASSMB;INSERTION=ATAATAATAGTTTTAATGATATTTA;MAPQ=60;MATEID=51946:2;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_1_195093501_195118501_7C;SPAN=143;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:26:38:19.1:75.2,0,19.1:26:0:-76.88:76.88\n1\t195115296\t51946:2\tA\tA[1:195115153[\t75\tPASS\tEVDNC=ASSMB;INSERTION=ATAATAATAGTTTTAATGATATTTA;MAPQ=60;MATEID=51946:1;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_1_195093501_195118501_7C;SPAN=143;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:26:38:19.1:75.2,0,19.1:26:0:-76.88:76.88\n1\t195422180\t52049:1\tG\tG[1:195422969[\t26\tPASS\tEVDNC=ASSMB;HOMSEQ=G;MAPQ=60;MATEID=52049:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_195412001_195437001_33C;SPAN=789;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:25:26:26,0,35.9:10:0:-25.98:26.09\n1\t195422969\t52049:2\tG\t]1:195422180]G\t26\tPASS\tEVDNC=ASSMB;HOMSEQ=G;MAPQ=60;MATEID=52049:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_195412001_195437001_33C;SPAN=789;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:25:26:26,0,35.9:10:0:-25.98:26.09\n1\t195605433\t52131:1\tA\t]1:195640364]A\t25\tPASS\tEVDNC=ASSMB;HOMSEQ=AA;MAPQ=60;MATEID=52131:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_195632501_195657501_26C;SPAN=34931;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:15:12.2:25.4,0,12.2:9:0:-25.74:25.74\n1\t195640364\t52131:2\tA\tA[1:195605433[\t25\tPASS\tEVDNC=ASSMB;HOMSEQ=AA;MAPQ=60;MATEID=52131:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_195632501_195657501_26C;SPAN=34931;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:15:12.2:25.4,0,12.2:9:0:-25.74:25.74\n1\t196626791\t52438:1\tT\tT[1:196627468[\t26\tPASS\tEVDNC=ASSMB;INSERTION=TAAAATAGTAATTTAAAATAGTAATTTAAAATAGTAATTC;MAPQ=60;MATEID=52438:2;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_1_196612501_196637501_5C;SPAN=677;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:24:26.3:26.3,0,32.9:10:0:-26.26:26.32\n1\t196627468\t52438:2\tA\t]1:196626791]A\t26\tPASS\tEVDNC=ASSMB;INSERTION=TAAAATAGTAATTTAAAATAGTAATTTAAAATAGTAATTC;MAPQ=60;MATEID=52438:1;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_1_196612501_196637501_5C;SPAN=677;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:24:26.3:26.3,0,32.9:10:0:-26.26:26.32\n1\t196766665\t52471:1\tT\t]1:196775958]T\t31\tPASS\tDISC_MAPQ=41;EVDNC=DSCRD;IMPRECISE;MAPQ=41;MATEID=52471:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:196766665(-)-1:196775958(+)__1_196759501_196784501D;SPAN=9293;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:30:31.1:31.1,0,44.3:0:12:-31.18:31.31\n1\t196775958\t52471:2\tA\tA[1:196766665[\t31\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=52471:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:196766665(-)-1:196775958(+)__1_196759501_196784501D;SPAN=9293;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:30:31.1:31.1,0,44.3:0:12:-31.18:31.31\n1\t197531390\t52816:1\tT\tT[1:197534142[\t58\tPASS\tEVDNC=ASSMB;HOMSEQ=AACAAATCTTTT;MAPQ=60;MATEID=52816:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_1_197519001_197544001_32C;SPAN=2752;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:25:87:58.1:58.1,0,160.4:25:0:-58.07:60.75\n1\t197534142\t52816:2\tA\t]1:197531390]A\t58\tPASS\tEVDNC=ASSMB;HOMSEQ=AACAAATCTTTT;MAPQ=60;MATEID=52816:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_1_197519001_197544001_32C;SPAN=2752;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:25:87:58.1:58.1,0,160.4:25:0:-58.07:60.75\n1\t197544937\t52839:1\tA\t[10:21717820[A\t49\tPASS\tDISC_MAPQ=55;EVDNC=TSI_L;INSERTION=CCCTTCTCC;MAPQ=60;MATEID=52839:2;MATENM=0;NM=14;NUMPARTS=3;REPSEQ=CC;SCTG=c_1_197543501_197568501_0C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:17:8:4.5:49.5,4.5,0:15:9:-49.51:49.51\n1\t197787659\t52920:1\tT\t[1:197788855[T\t92\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TG;MAPQ=60;MATEID=52920:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_197788501_197813501_146C;SPAN=1196;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:30:13:8.4:92.4,8.4,0:21:13:-92.42:92.42\n1\t197788855\t52920:2\tC\t[1:197787659[C\t92\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TG;MAPQ=60;MATEID=52920:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_197788501_197813501_146C;SPAN=1196;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:30:13:8.4:92.4,8.4,0:21:13:-92.42:92.42\n1\t198394972\t53112:1\tC\t[1:198396527[C\t27\tPASS\tDISC_MAPQ=48;EVDNC=ASDIS;HOMSEQ=TGG;MAPQ=46;MATEID=53112:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_198376501_198401501_35C;SPAN=1555;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:33:27.2:27.2,0,53.6:6:8:-27.04:27.59\n1\t198396527\t53112:2\tT\t[1:198394972[T\t27\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TGG;MAPQ=60;MATEID=53112:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_198376501_198401501_35C;SPAN=1555;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:33:27.2:27.2,0,53.6:6:8:-27.04:27.59\n1\t198411139\t887423:1\tT\tT[20:58411089[\t7\tPASS\tEVDNC=ASSMB;INSERTION=AAGAAAC;MAPQ=60;MATEID=887423:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_58408001_58433001_70C;SPAN=-1;SUBN=1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:68:7.4:7.4,0,162.5:8:0:-7.294:15.98\n1\t199469615\t53457:1\tA\tA[1:199471106[\t80\tPASS\tEVDNC=ASSMB;HOMSEQ=AAAAATATTGGGTCTCA;MAPQ=60;MATEID=53457:2;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_1_199454501_199479501_28C;SPAN=1491;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:31:78:80.6:80.6,0,113.6:31:0:-80.41:80.76\n1\t199471106\t53457:2\tA\t]1:199469615]A\t80\tPASS\tEVDNC=ASSMB;HOMSEQ=AAAAATATTGGGTCTCA;MAPQ=60;MATEID=53457:1;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_1_199454501_199479501_28C;SPAN=1491;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:31:78:80.6:80.6,0,113.6:31:0:-80.41:80.76\n1\t201509820\t54322:1\tT\t]1:201560289]T\t51\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TT;MAPQ=60;MATEID=54322:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_201537001_201562001_61C;SPAN=50469;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:18:28:18.5:51.5,0,18.5:10:14:-52.37:52.37\n1\t201560289\t54322:2\tT\tT[1:201509820[\t51\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TT;MAPQ=60;MATEID=54322:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_201537001_201562001_61C;SPAN=50469;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:18:28:18.5:51.5,0,18.5:10:14:-52.37:52.37\n1\t201763560\t54467:1\tG\tG[1:202017203[\t40\tPASS\tEVDNC=ASSMB;INSERTION=G;MAPQ=60;MATEID=54467:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_202002501_202027501_0C;SPAN=253643;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:20:7.7:40.7,0,7.7:14:0:-41.65:41.65\n1\t201949360\t69640:1\tT\t[2:5997703[T\t31\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;MAPQ=60;MATEID=69640:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_2_5978001_6003001_1C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:18:11.6:31.4,0,11.6:8:5:-31.6:31.6\n1\t202017203\t54467:2\tT\t]1:201763560]T\t40\tPASS\tEVDNC=ASSMB;INSERTION=G;MAPQ=60;MATEID=54467:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_202002501_202027501_0C;SPAN=253643;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:20:7.7:40.7,0,7.7:14:0:-41.65:41.65\n1\t202207989\t69642:1\tA\tA]2:5987300]\t26\tPASS\tDISC_MAPQ=57;EVDNC=DSCRD;IMPRECISE;MAPQ=57;MATEID=69642:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:202207989(+)-2:5987300(+)__2_5978001_6003001D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:13:6.2:26,0,6.2:0:9:-26.69:26.69\n1\t202625106\t723413:1\tG\tG[15:30173126[\t31\tPASS\tDISC_MAPQ=255;EVDNC=TSI_L;HOMSEQ=GTGTGTGG;INSERTION=TGTTGTGTGTGGCCTGTAATAGG;MAPQ=60;MATEID=723413:2;MATENM=0;NM=1;NUMPARTS=3;REPSEQ=GTGTGTGT;SCTG=c_15_30159501_30184501_42C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:20:33:11:31,0,11:10:10:-31.29:31.29\n1\t203095218\t54940:1\tA\tA[1:203096063[\t41\tPASS\tEVDNC=ASSMB;INSERTION=TCCTATCTGTTT;MAPQ=60;MATEID=54940:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_203080501_203105501_70C;SPAN=845;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:15:27:25.4:41.9,0,25.4:15:0:-42.12:42.12\n1\t203096063\t54940:2\tT\t]1:203095218]T\t41\tPASS\tEVDNC=ASSMB;INSERTION=TCCTATCTGTTT;MAPQ=60;MATEID=54940:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_203080501_203105501_70C;SPAN=845;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:15:27:25.4:41.9,0,25.4:15:0:-42.12:42.12\n1\t203715212\t55121:1\tT\tT[1:203717071[\t56\tPASS\tDISC_MAPQ=56;EVDNC=DSCRD;IMPRECISE;MAPQ=56;MATEID=55121:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:203715212(+)-1:203717071(-)__1_203693001_203718001D;SPAN=1859;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:19:24:3.2:56,0,3.2:0:19:-58.57:58.57\n1\t203717071\t55121:2\tG\t]1:203715212]G\t56\tPASS\tDISC_MAPQ=58;EVDNC=DSCRD;IMPRECISE;MAPQ=58;MATEID=55121:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:203715212(+)-1:203717071(-)__1_203693001_203718001D;SPAN=1859;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:19:24:3.2:56,0,3.2:0:19:-58.57:58.57\n1\t205966752\t55983:1\tC\tC[1:205967055[\t53\tPASS\tEVDNC=ASSMB;HOMSEQ=AAGATAAAGGAGGC;MAPQ=60;MATEID=55983:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_1_205947001_205972001_100C;SPAN=303;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:19:33:27.2:53.6,0,27.2:19:0:-53.81:53.81\n1\t205967055\t55983:2\tA\t]1:205966752]A\t53\tPASS\tEVDNC=ASSMB;HOMSEQ=AAGATAAAGGAGGC;MAPQ=60;MATEID=55983:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_1_205947001_205972001_100C;SPAN=303;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:19:33:27.2:53.6,0,27.2:19:0:-53.81:53.81\n1\t206923997\t56211:1\tG\t]1:206924644]G\t60\tPASS\tDISC_MAPQ=48;EVDNC=DSCRD;IMPRECISE;MAPQ=48;MATEID=56211:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:206923997(-)-1:206924644(+)__1_206902501_206927501D;SPAN=647;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:22:43:47.3:60.5,0,47.3:0:22:-60.61:60.61\n1\t206924644\t56211:2\tT\tT[1:206923997[\t60\tPASS\tDISC_MAPQ=53;EVDNC=DSCRD;IMPRECISE;MAPQ=53;MATEID=56211:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:206923997(-)-1:206924644(+)__1_206902501_206927501D;SPAN=647;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:22:43:47.3:60.5,0,47.3:0:22:-60.61:60.61\n1\t207119002\t56272:1\tA\t[1:207119851[A\t48\tPASS\tDISC_MAPQ=60;EVDNC=TSI_L;INSERTION=AACAC;MAPQ=60;MATEID=56272:2;MATENM=1;NM=1;NUMPARTS=3;REPSEQ=ACAC;SCTG=c_1_207098501_207123501_11C;SPAN=849;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:18:39:48.5:48.5,0,48.5:15:6:-48.46:48.46\n1\t207119017\t56274:1\tG\tG[1:207119851[\t62\tPASS\tDISC_MAPQ=255;EVDNC=TSI_G;INSERTION=GAATTCATTCCAGTTTACAATGGTGGGCTTTACTCGCTCATCTTTGCAGGTTCCACGTTTGTCCTTGAAGCACTCAGTTCATGTCTATCTAACAC;MAPQ=60;MATEID=56274:2;MATENM=1;NM=1;NUMPARTS=3;SCTG=c_1_207098501_207123501_11C;SPAN=834;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:22:38:32.3:62,0,32.3:22:0:-62.39:62.39\n1\t207119851\t56272:2\tG\t[1:207119002[G\t48\tPASS\tDISC_MAPQ=60;EVDNC=TSI_L;INSERTION=AACAC;MAPQ=60;MATEID=56272:1;MATENM=1;NM=1;NUMPARTS=3;REPSEQ=ACAC;SCTG=c_1_207098501_207123501_11C;SPAN=849;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:18:39:48.5:48.5,0,48.5:15:6:-48.46:48.46\n1\t207119851\t56274:2\tG\t]1:207119017]G\t62\tPASS\tDISC_MAPQ=255;EVDNC=TSI_G;INSERTION=GAATTCATTCCAGTTTACAATGGTGGGCTTTACTCGCTCATCTTTGCAGGTTCCACGTTTGTCCTTGAAGCACTCAGTTCATGTCTATCTAACAC;MAPQ=60;MATEID=56274:1;MATENM=1;NM=1;NUMPARTS=3;SCTG=c_1_207098501_207123501_11C;SPAN=834;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:22:38:32.3:62,0,32.3:22:0:-62.39:62.39\n1\t207291869\t56340:1\tC\tC[1:207293505[\t20\tPASS\tDISC_MAPQ=53;EVDNC=DSCRD;IMPRECISE;MAPQ=53;MATEID=56340:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:207291869(+)-1:207293505(-)__1_207270001_207295001D;SPAN=1636;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:32:20.9:20.9,0,57.2:0:9:-20.71:21.77\n1\t207293505\t56340:2\tA\t]1:207291869]A\t20\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=56340:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:207291869(+)-1:207293505(-)__1_207270001_207295001D;SPAN=1636;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:32:20.9:20.9,0,57.2:0:9:-20.71:21.77\n1\t207368688\t56373:1\tC\tC[1:207372219[\t54\tPASS\tDISC_MAPQ=56;EVDNC=DSCRD;IMPRECISE;MAPQ=56;MATEID=56373:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:207368688(+)-1:207372219(-)__1_207368001_207393001D;SPAN=3531;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:19:30:21.2:54.2,0,21.2:0:19:-55.07:55.07\n1\t207372219\t56373:2\tC\t]1:207368688]C\t54\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=56373:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:207368688(+)-1:207372219(-)__1_207368001_207393001D;SPAN=3531;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:19:30:21.2:54.2,0,21.2:0:19:-55.07:55.07\n1\t207739629\t35280:2\tC\tC]1:143864342]\t36\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;INSERTION=CTCC;MAPQ=60;MATEID=35280:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_143864001_143889001_6C;SPAN=63875287;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:12:9:3.3:36.3,3.3,0:9:6:-36.31:36.31\n1\t209405199\t56773:1\tC\tC[1:209405400[\t12\tPASS\tEVDNC=ASSMB;HOMSEQ=TAC;MAPQ=60;MATEID=56773:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_209401501_209426501_12C;SPAN=201;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:5:16:12.2:12.2,0,25.4:5:0:-12.01:12.37\n1\t209405400\t56773:2\tT\t]1:209405199]T\t12\tPASS\tEVDNC=ASSMB;HOMSEQ=TAC;MAPQ=60;MATEID=56773:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_209401501_209426501_12C;SPAN=201;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:5:16:12.2:12.2,0,25.4:5:0:-12.01:12.37\n1\t209904710\t56838:1\tA\tA[1:209912633[\t36\tPASS\tEVDNC=ASSMB;INSERTION=GAATTA;MAPQ=60;MATEID=56838:2;MATENM=2;NM=4;NUMPARTS=2;SCTG=c_1_209891501_209916501_14C;SPAN=7923;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:12:5:3.3:36.3,3.3,0:12:0:-36.31:36.31\n1\t209912633\t56838:2\tG\t]1:209904710]G\t36\tPASS\tEVDNC=ASSMB;INSERTION=GAATTA;MAPQ=60;MATEID=56838:1;MATENM=4;NM=2;NUMPARTS=2;SCTG=c_1_209891501_209916501_14C;SPAN=7923;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:12:5:3.3:36.3,3.3,0:12:0:-36.31:36.31\n1\t213160429\t57479:1\tT\t]1:213170967]T\t45\tPASS\tDISC_MAPQ=57;EVDNC=ASDIS;HOMSEQ=TGCA;MAPQ=60;MATEID=57479:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_213150001_213175001_21C;SPAN=10538;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:16:26:19.1:45.5,0,19.1:12:12:-46.05:46.05\n1\t213170967\t57479:2\tA\tA[1:213160429[\t45\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TGCA;MAPQ=60;MATEID=57479:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_213150001_213175001_21C;SPAN=10538;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:16:26:19.1:45.5,0,19.1:12:12:-46.05:46.05\n1\t213512566\t57547:1\tT\t[1:213625887[T\t69\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=CA;MAPQ=60;MATEID=57547:2;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_1_213615501_213640501_20C;SPAN=113321;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:23:11:6.3:69.3,6.3,0:17:9:-69.32:69.32\n1\t213512572\t57548:1\tT\tT]1:213626164]\t72\tPASS\tDISC_MAPQ=54;EVDNC=ASDIS;MAPQ=60;MATEID=57548:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_1_213615501_213640501_10C;SPAN=113592;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:24:11:6.6:72.6,6.6,0:17:9:-72.62:72.62\n1\t213625887\t57547:2\tC\t[1:213512566[C\t69\tPASS\tDISC_MAPQ=13;EVDNC=ASDIS;HOMSEQ=CA;MAPQ=55;MATEID=57547:1;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_1_213615501_213640501_20C;SPAN=113321;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:23:11:6.3:69.3,6.3,0:17:9:-69.32:69.32\n1\t213626164\t57548:2\tA\tA]1:213512572]\t72\tPASS\tDISC_MAPQ=16;EVDNC=ASDIS;MAPQ=42;MATEID=57548:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_1_213615501_213640501_10C;SPAN=113592;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:24:11:6.6:72.6,6.6,0:17:9:-72.62:72.62\n1\t214483362\t57747:1\tT\tT]5:115842122]\t28\tPASS\tDISC_MAPQ=24;EVDNC=DSCRD;IMPRECISE;MAPQ=24;MATEID=57747:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:214483362(+)-5:115842122(+)__1_214473001_214498001D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:16:8.9:28.7,0,8.9:0:10:-28.89:28.89\n1\t214639551\t57774:1\tC\t[20:57108067[C\t62\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;INSERTION=GTAG;MAPQ=60;MATEID=57774:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_214620001_214645001_13C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:20:21:5.7:62.7,5.7,0:14:9:-62.72:62.72\n1\t215441801\t58040:1\tA\t]1:215442558]A\t69\tPASS\tEVDNC=ASSMB;HOMSEQ=AAT;MAPQ=60;MATEID=58040:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_215428501_215453501_11C;SPAN=757;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:26:59:69.2:69.2,0,79.1:26:0:-69.24:69.28\n1\t215442558\t58040:2\tT\tT[1:215441801[\t69\tPASS\tEVDNC=ASSMB;HOMSEQ=AAT;MAPQ=60;MATEID=58040:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_215428501_215453501_11C;SPAN=757;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:26:59:69.2:69.2,0,79.1:26:0:-69.24:69.28\n1\t217284629\t58620:1\tC\tC[1:217285059[\t64\tPASS\tEVDNC=ASSMB;HOMSEQ=TTC;MAPQ=60;MATEID=58620:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_1_217266001_217291001_80C;SPAN=430;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:22:28:5.3:64.7,0,5.3:22:0:-67.65:67.65\n1\t217285059\t58620:2\tT\t]1:217284629]T\t64\tPASS\tEVDNC=ASSMB;HOMSEQ=TTC;MAPQ=60;MATEID=58620:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_1_217266001_217291001_80C;SPAN=430;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:22:28:5.3:64.7,0,5.3:22:0:-67.65:67.65\n1\t217677003\t58748:1\tA\t]1:217682529]A\t37\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;INSERTION=CTTTATTATTTTAAATTATTAAAATATTATTATTTTAATAATTTAATATTATTAATAATAATTAATTAATATTATTAATTTAATATTATTAAAATAATATTAAAATATTATTAAAATATTATTTAAATTATTA;MAPQ=60;MATEID=58748:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_217658001_217683001_8C;SPAN=5526;SUBN=4;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:16:56:37.1:37.1,0,103.1:15:2:-37.08:38.84\n1\t217682529\t58748:2\tT\tT[1:217677003[\t37\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;INSERTION=CTTTATTATTTTAAATTATTAAAATATTATTATTTTAATAATTTAATATTATTAATAATAATTAATTAATATTATTAATTTAATATTATTAAAATAATATTAAAATATTATTAAAATATTATTTAAATTATTA;MAPQ=60;MATEID=58748:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_217658001_217683001_8C;SPAN=5526;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:16:56:37.1:37.1,0,103.1:15:2:-37.08:38.84\n1\t217744180\t58785:1\tC\tC[1:217744483[\t59\tPASS\tEVDNC=ASSMB;HOMSEQ=AAAGAATTTTC;MAPQ=60;MATEID=58785:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_217731501_217756501_27C;SPAN=303;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:21:35:26.6:59.6,0,26.6:21:0:-60.07:60.07\n1\t217744483\t58785:2\tA\t]1:217744180]A\t59\tPASS\tEVDNC=ASSMB;HOMSEQ=AAAGAATTTTC;MAPQ=60;MATEID=58785:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_217731501_217756501_27C;SPAN=303;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:21:35:26.6:59.6,0,26.6:21:0:-60.07:60.07\n1\t218009279\t58916:1\tA\tA[1:218015252[\t99\tPASS\tDISC_MAPQ=58;EVDNC=DSCRD;IMPRECISE;MAPQ=58;MATEID=58916:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:218009279(+)-1:218015252(-)__1_218001001_218026001D;SPAN=5973;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:34:11:9.3:102.3,9.3,0:0:34:-102.3:102.3\n1\t218015252\t58916:2\tC\t]1:218009279]C\t99\tPASS\tDISC_MAPQ=59;EVDNC=DSCRD;IMPRECISE;MAPQ=59;MATEID=58916:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:218009279(+)-1:218015252(-)__1_218001001_218026001D;SPAN=5973;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:34:11:9.3:102.3,9.3,0:0:34:-102.3:102.3\n1\t218072296\t58956:1\tA\tA[1:218073148[\t56\tPASS\tEVDNC=ASSMB;HOMSEQ=AAAAAAAGAA;MAPQ=60;MATEID=58956:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_1_218050001_218075001_13C;SPAN=852;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:20:34:26.9:56.6,0,26.9:20:0:-56.93:56.93\n1\t218073148\t58956:2\tA\t]1:218072296]A\t56\tPASS\tEVDNC=ASSMB;HOMSEQ=AAAAAAAGAA;MAPQ=60;MATEID=58956:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_1_218050001_218075001_13C;SPAN=852;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:20:34:26.9:56.6,0,26.9:20:0:-56.93:56.93\n1\t223081189\t60131:1\tG\tG]Un_JTFH01001976v1_decoy:2126]\t52\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=60131:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_223072501_223097501_5C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:18:10:4.8:52.8,4.8,0:18:0:-52.81:52.81\n1\t223557417\t60201:1\tC\tC[1:223608936[\t23\tPASS\tDISC_MAPQ=16;EVDNC=DSCRD;IMPRECISE;MAPQ=16;MATEID=60201:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:223557417(+)-1:223608936(-)__1_223587001_223612001D;SPAN=51519;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:8:4:2.1:23.1,2.1,0:0:8:-23.11:23.11\n1\t223608936\t60201:2\tT\t]1:223557417]T\t23\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=60201:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:223557417(+)-1:223608936(-)__1_223587001_223612001D;SPAN=51519;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:8:4:2.1:23.1,2.1,0:0:8:-23.11:23.11\n1\t224945988\t60758:1\tC\tC[1:225060988[\t46\tPASS\tDISC_MAPQ=39;EVDNC=DSCRD;IMPRECISE;MAPQ=39;MATEID=60758:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:224945988(+)-1:225060988(-)__1_225057001_225082001D;SPAN=115000;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:16:3:4.2:46.2,4.2,0:0:16:-46.21:46.21\n1\t225060988\t60758:2\tC\t]1:224945988]C\t46\tPASS\tDISC_MAPQ=58;EVDNC=DSCRD;IMPRECISE;MAPQ=58;MATEID=60758:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:224945988(+)-1:225060988(-)__1_225057001_225082001D;SPAN=115000;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:16:3:4.2:46.2,4.2,0:0:16:-46.21:46.21\n1\t225835379\t400824:1\tA\t]7:66112826]A\t23\tPASS\tDISC_MAPQ=37;EVDNC=DSCRD;IMPRECISE;MAPQ=37;MATEID=400824:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:225835379(-)-7:66112826(+)__7_66101001_66126001D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:36:23:23,0,65.9:0:10:-22.89:24.13\n1\t227836405\t61932:1\tC\tC[1:227836705[\t30\tPASS\tEVDNC=ASSMB;HOMSEQ=AATAAAAGCTTCC;MAPQ=60;MATEID=61932:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_227825501_227850501_75C;SPAN=300;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:22:23.6:30.2,0,23.6:11:0:-30.15:30.15\n1\t227836705\t61932:2\tA\t]1:227836405]A\t30\tPASS\tEVDNC=ASSMB;HOMSEQ=AATAAAAGCTTCC;MAPQ=60;MATEID=61932:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_227825501_227850501_75C;SPAN=300;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:22:23.6:30.2,0,23.6:11:0:-30.15:30.15\n1\t227927495\t62260:1\tC\t]1:228934655]C\t82\tPASS\tEVDNC=ASSMB;HOMSEQ=CAG;MAPQ=60;MATEID=62260:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_228928001_228953001_20C;SPAN=1007160;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:27:15:7.5:82.5,7.5,0:27:0:-82.52:82.52\n1\t228154057\t416704:1\tG\t[7:100470421[G\t79\tPASS\tDISC_MAPQ=255;EVDNC=ASDIS;HOMSEQ=AGC;MAPQ=60;MATEID=416704:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_100450001_100475001_20C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:26:15:7.2:79.2,7.2,0:14:19:-79.22:79.22\n1\t228212126\t62042:1\tC\tC[7:100658692[\t20\tPASS\tEVDNC=ASSMB;INSERTION=TGGAGGGTTTGGGAGCCTGTCCA;MAPQ=60;MATEID=62042:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_1_228193001_228218001_63C;SPAN=-1;SUBN=1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:21:20.6:20.6,0,30.5:8:0:-20.51:20.65\n1\t228934655\t62260:2\tG\tG[1:227927495[\t82\tPASS\tEVDNC=ASSMB;HOMSEQ=CAG;MAPQ=60;MATEID=62260:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_228928001_228953001_20C;SPAN=1007160;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:27:15:7.5:82.5,7.5,0:27:0:-82.52:82.52\n1\t230555216\t62473:1\tG\t]1:230555362]G\t21\tPASS\tEVDNC=ASSMB;HOMSEQ=GCCTGTAATCCCAGC;MAPQ=60;MATEID=62473:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_230545001_230570001_6C;SPAN=146;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:29:21.5:21.5,0,51.2:9:0:-21.56:22.23\n1\t230555362\t62473:2\tC\tC[1:230555216[\t21\tPASS\tEVDNC=ASSMB;HOMSEQ=GCCTGTAATCCCAGC;MAPQ=60;MATEID=62473:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_230545001_230570001_6C;SPAN=146;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:29:21.5:21.5,0,51.2:9:0:-21.56:22.23\n1\t232116541\t62784:1\tA\tA]7:98344850]\t46\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=GATTCTCCTGCCTCA;MAPQ=60;MATEID=62784:2;MATENM=3;NM=3;NUMPARTS=2;SCTG=c_1_232113001_232138001_17C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:16:10:4.2:46.2,4.2,0:14:2:-46.21:46.21\n1\t233826553\t63177:1\tT\tT[1:233827866[\t46\tPASS\tDISC_MAPQ=22;EVDNC=DSCRD;IMPRECISE;MAPQ=22;MATEID=63177:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:233826553(+)-1:233827866(-)__1_233828001_233853001D;SPAN=1313;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:16:0:4.2:46.2,4.2,0:0:16:-46.21:46.21\n1\t233827866\t63177:2\tA\t]1:233826553]A\t46\tPASS\tDISC_MAPQ=49;EVDNC=DSCRD;IMPRECISE;MAPQ=49;MATEID=63177:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:233826553(+)-1:233827866(-)__1_233828001_233853001D;SPAN=1313;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:16:0:4.2:46.2,4.2,0:0:16:-46.21:46.21\n1\t234776441\t63373:2\tA\t[1:16725253[A\t99\tPASS\tDISC_MAPQ=58;EVDNC=ASDIS;INSERTION=GCAGAAGCCGGCGGGATGGGGC;MAPQ=60;MATEID=63373:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_234759001_234784001_38C;SPAN=218051188;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:81:22:22.5:247.5,22.5,0:52:53:-247.6:247.6\n1\t235078244\t63458:1\tG\t]1:235078726]G\t18\tPASS\tDISC_MAPQ=49;EVDNC=DSCRD;IMPRECISE;MAPQ=49;MATEID=63458:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:235078244(-)-1:235078726(+)__1_235077501_235102501D;SPAN=482;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:40:18.5:18.5,0,81.2:0:9:-18.47:20.76\n1\t235078726\t63458:2\tG\tG[1:235078244[\t18\tPASS\tDISC_MAPQ=51;EVDNC=DSCRD;IMPRECISE;MAPQ=51;MATEID=63458:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:235078244(-)-1:235078726(+)__1_235077501_235102501D;SPAN=482;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:40:18.5:18.5,0,81.2:0:9:-18.47:20.76\n1\t236958951\t63979:1\tA\tA[1:236961747[\t39\tPASS\tEVDNC=ASSMB;INSERTION=TTCTAGGAAGGAGGTGCACATC;MAPQ=60;MATEID=63979:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_236939501_236964501_2C;SPAN=2796;SUBN=1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:13:12:3.6:39.6,3.6,0:13:0:-39.61:39.61\n1\t236961747\t63979:2\tT\t]1:236958951]T\t39\tPASS\tEVDNC=ASSMB;INSERTION=TTCTAGGAAGGAGGTGCACATC;MAPQ=60;MATEID=63979:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_236939501_236964501_2C;SPAN=2796;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:13:12:3.6:39.6,3.6,0:13:0:-39.61:39.61\n1\t237031073\t64001:1\tC\tC[1:237031884[\t25\tPASS\tEVDNC=ASSMB;HOMSEQ=GC;MAPQ=60;MATEID=64001:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_237013001_237038001_32C;SPAN=811;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:17:15.2:25.1,0,15.2:9:0:-24.99:24.99\n1\t237031884\t64001:2\tG\t]1:237031073]G\t25\tPASS\tEVDNC=ASSMB;HOMSEQ=GC;MAPQ=60;MATEID=64001:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_237013001_237038001_32C;SPAN=811;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:17:15.2:25.1,0,15.2:9:0:-24.99:24.99\n1\t237402791\t64097:1\tA\tA]1:237402976]\t30\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=64097:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:237402791(+)-1:237402976(+)__1_237380501_237405501D;SPAN=185;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:21:20.6:30.5,0,20.6:0:11:-30.47:30.47\n1\t237402976\t64097:2\tA\tA]1:237402791]\t30\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=64097:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:237402791(+)-1:237402976(+)__1_237380501_237405501D;SPAN=185;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:21:20.6:30.5,0,20.6:0:11:-30.47:30.47\n1\t237925038\t64246:1\tT\t]1:237966824]T\t26\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=64246:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:237925038(-)-1:237966824(+)__1_237944001_237969001D;SPAN=41786;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:9:7:2.4:26.4,2.4,0:0:9:-26.41:26.41\n1\t237966824\t64246:2\tT\tT[1:237925038[\t26\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=64246:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:237925038(-)-1:237966824(+)__1_237944001_237969001D;SPAN=41786;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:9:7:2.4:26.4,2.4,0:0:9:-26.41:26.41\n1\t239952717\t64778:1\tT\t[1:239953384[T\t72\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;INSERTION=CCAGCTC;MAPQ=60;MATEID=64778:2;MATENM=14;NM=0;NUMPARTS=2;SCTG=c_1_239953001_239978001_1C;SPAN=667;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:24:6:6.6:72.6,6.6,0:19:18:-72.62:72.62\n1\t239953183\t64780:1\tT\tT]1:239953450]\t21\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=64780:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:239953183(+)-1:239953450(+)__1_239953001_239978001D;SPAN=267;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:19:21.2:21.2,0,24.5:0:8:-21.07:21.11\n1\t239953384\t64778:2\tC\t[1:239952717[C\t72\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;INSERTION=CCAGCTC;MAPQ=60;MATEID=64778:1;MATENM=0;NM=14;NUMPARTS=2;SCTG=c_1_239953001_239978001_1C;SPAN=667;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:24:6:6.6:72.6,6.6,0:19:18:-72.62:72.62\n1\t239953450\t64780:2\tT\tT]1:239953183]\t21\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=64780:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:239953183(+)-1:239953450(+)__1_239953001_239978001D;SPAN=267;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:19:21.2:21.2,0,24.5:0:8:-21.07:21.11\n1\t241920572\t65248:1\tC\t]1:241920722]C\t72\tPASS\tEVDNC=ASSMB;HOMSEQ=CCAAAGTGCTGG;MAPQ=60;MATEID=65248:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_1_241913001_241938001_3C;SPAN=150;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:26:48:46.1:72.5,0,46.1:26:0:-72.58:72.58\n1\t241920722\t65248:2\tG\tG[1:241920572[\t72\tPASS\tEVDNC=ASSMB;HOMSEQ=CCAAAGTGCTGG;MAPQ=60;MATEID=65248:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_1_241913001_241938001_3C;SPAN=150;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:26:48:46.1:72.5,0,46.1:26:0:-72.58:72.58\n1\t242964495\t65568:1\tG\tG[1:242965914[\t49\tPASS\tDISC_MAPQ=18;EVDNC=ASDIS;HOMSEQ=GCCTCCCAAAGTGCTGGGATTACAGG;MAPQ=60;MATEID=65568:2;MATENM=19;NM=2;NUMPARTS=2;SCTG=c_1_242942001_242967001_8C;SPAN=1419;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:17:5:4.5:49.5,4.5,0:15:7:-49.51:49.51\n1\t242965914\t65568:2\tG\t]1:242964495]G\t49\tPASS\tDISC_MAPQ=21;EVDNC=ASDIS;HOMSEQ=GCCTCCCAAAGTGCTGGGATTACAGG;MAPQ=60;MATEID=65568:1;MATENM=2;NM=19;NUMPARTS=2;SCTG=c_1_242942001_242967001_8C;SPAN=1419;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:17:5:4.5:49.5,4.5,0:15:7:-49.51:49.51\n1\t243619556\t65663:1\tA\tA[1:243620461[\t42\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=65663:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:243619556(+)-1:243620461(-)__1_243603501_243628501D;SPAN=905;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:14:3:3.9:42.9,3.9,0:0:14:-42.91:42.91\n1\t243620461\t65663:2\tA\t]1:243619556]A\t42\tPASS\tDISC_MAPQ=53;EVDNC=DSCRD;IMPRECISE;MAPQ=53;MATEID=65663:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:243619556(+)-1:243620461(-)__1_243603501_243628501D;SPAN=905;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:14:3:3.9:42.9,3.9,0:0:14:-42.91:42.91\n1\t247687256\t66816:1\tG\tG[1:247693206[\t36\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=66816:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:247687256(+)-1:247693206(-)__1_247670501_247695501D;SPAN=5950;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:12:12:3.3:36.3,3.3,0:0:12:-36.31:36.31\n1\t247693206\t66816:2\tA\t]1:247687256]A\t36\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=66816:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:247687256(+)-1:247693206(-)__1_247670501_247695501D;SPAN=5950;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:12:12:3.3:36.3,3.3,0:0:12:-36.31:36.31\n1\t247888190\t66912:1\tT\tT[1:247894337[\t89\tPASS\tEVDNC=ASSMB;HOMSEQ=GCATGTATTTATTT;MAPQ=60;MATEID=66912:2;MATENM=3;NM=2;NUMPARTS=2;SCTG=c_1_247891001_247916001_24C;SPAN=6147;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:29:7:8.1:89.1,8.1,0:29:0:-89.12:89.12\n1\t247894337\t66912:2\tG\t]1:247888190]G\t89\tPASS\tEVDNC=ASSMB;HOMSEQ=GCATGTATTTATTT;MAPQ=60;MATEID=66912:1;MATENM=2;NM=3;NUMPARTS=2;SCTG=c_1_247891001_247916001_24C;SPAN=6147;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:29:7:8.1:89.1,8.1,0:29:0:-89.12:89.12\n1\t248752958\t891075:1\tA\tA]21:6070645]\t26\tPASS\tDISC_MAPQ=16;EVDNC=DSCRD;IMPRECISE;MAPQ=16;MATEID=891075:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:248752958(+)-21:6070645(+)__21_6051501_6076501D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:9:2:2.4:26.4,2.4,0:0:9:-26.41:26.41\n2\t1099575\t67773:1\tT\t]2:1099681]T\t56\tPASS\tEVDNC=ASSMB;HOMSEQ=TCTGAAGGTGGGTGTAGTGAGGGCAGT;MAPQ=60;MATEID=67773:2;MATENM=4;NM=1;NUMPARTS=2;SCTG=c_2_1078001_1103001_15C;SPAN=106;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:21:44:53.6:56.9,0,53.6:21:0:-56.96:56.96\n2\t1099681\t67773:2\tT\tT[2:1099575[\t56\tPASS\tEVDNC=ASSMB;HOMSEQ=TCTGAAGGTGGGTGTAGTGAGGGCAGT;MAPQ=60;MATEID=67773:1;MATENM=1;NM=4;NUMPARTS=2;SCTG=c_2_1078001_1103001_15C;SPAN=106;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:21:44:53.6:56.9,0,53.6:21:0:-56.96:56.96\n2\t1111743\t67779:1\tA\t]2:1112592]A\t37\tPASS\tDISC_MAPQ=37;EVDNC=DSCRD;IMPRECISE;MAPQ=37;MATEID=67779:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=2:1111743(-)-2:1112592(+)__2_1102501_1127501D;SPAN=849;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:32:37.4:37.4,0,40.7:0:14:-37.22:37.25\n2\t1112592\t67779:2\tG\tG[2:1111743[\t37\tPASS\tDISC_MAPQ=52;EVDNC=DSCRD;IMPRECISE;MAPQ=52;MATEID=67779:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=2:1111743(-)-2:1112592(+)__2_1102501_1127501D;SPAN=849;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:32:37.4:37.4,0,40.7:0:14:-37.22:37.25\n2\t1751730\t68180:1\tG\t]2:1751781]G\t86\tPASS\tDISC_MAPQ=255;EVDNC=TSI_G;INSERTION=TAGAGCGGGACATGCCCAGGAGTGGAGAGAAGAGAGGTCTTGAGGGTCCTCACCTTGTTAGAGCGGGACATGCCCAGGAGTGGAGAGAAGAGGGGTCTTGAGGGTCCTCACCTTGTGAGAGT;MAPQ=60;MATEID=68180:2;MATENM=1;NM=0;NUMPARTS=4;SCTG=c_2_1739501_1764501_123C;SPAN=51;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:32:69:86.3:86.3,0,86.3:32:0:-86.24:86.24\n2\t1751781\t68180:2\tT\tT[2:1751730[\t86\tPASS\tDISC_MAPQ=255;EVDNC=TSI_G;INSERTION=TAGAGCGGGACATGCCCAGGAGTGGAGAGAAGAGAGGTCTTGAGGGTCCTCACCTTGTTAGAGCGGGACATGCCCAGGAGTGGAGAGAAGAGGGGTCTTGAGGGTCCTCACCTTGTGAGAGT;MAPQ=60;MATEID=68180:1;MATENM=0;NM=1;NUMPARTS=4;SCTG=c_2_1739501_1764501_123C;SPAN=51;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:32:69:86.3:86.3,0,86.3:32:0:-86.24:86.24\n2\t2750138\t68404:1\tG\t]2:2750607]G\t19\tPASS\tDISC_MAPQ=15;EVDNC=DSCRD;IMPRECISE;MAPQ=15;MATEID=68404:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=2:2750138(-)-2:2750607(+)__2_2744001_2769001D;SPAN=469;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:24:19.7:19.7,0,39.5:0:8:-19.66:20.07\n2\t2750607\t68404:2\tT\tT[2:2750138[\t19\tPASS\tDISC_MAPQ=33;EVDNC=DSCRD;IMPRECISE;MAPQ=33;MATEID=68404:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=2:2750138(-)-2:2750607(+)__2_2744001_2769001D;SPAN=469;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:24:19.7:19.7,0,39.5:0:8:-19.66:20.07\n2\t3046153\t996191:1\tT\t]Un_JTFH01000155v1_decoy:2887]T\t69\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=996191:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_998_1_2887_0C;SPAN=-1;SUBN=7;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:23:7:6.3:69.3,6.3,0:23:0:-69.32:69.32\n2\t3046162\t996192:1\tT\tT[Un_JTFH01000155v1_decoy:1[\t59\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=996192:2;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_998_1_2887_4C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:20:6:5.4:59.4,5.4,0:20:0:-59.41:59.41\n2\t3046162\t68513:1\tT\tT[Un_JTFH01000155v1_decoy:1[\t72\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=68513:2;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_2_3038001_3063001_29C;SPAN=-1;SUBN=8;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:24:28:1.2:72.6,1.2,0:24:0:-76:76\n2\t3141039\t68552:1\tG\t]2:3141594]G\t37\tPASS\tDISC_MAPQ=18;EVDNC=ASDIS;HOMSEQ=GTCCACTCCCACAGCCCCTCAATCAATGCTGATAGACATGGAATCAT;MAPQ=60;MATEID=68552:2;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_2_3136001_3161001_53C;SPAN=555;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:31:37.7:37.7,0,37.7:10:4:-37.5:37.51\n2\t3141594\t68552:2\tT\tT[2:3141039[\t37\tPASS\tDISC_MAPQ=58;EVDNC=ASDIS;HOMSEQ=GTCCACTCCCACAGCCCCTCAATCAATGCTGATAGACATGGAATCAT;MAPQ=27;MATEID=68552:1;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_2_3136001_3161001_53C;SPAN=555;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:31:37.7:37.7,0,37.7:10:4:-37.5:37.51\n2\t3448579\t68680:1\tA\t]2:3448762]A\t15\tPASS\tEVDNC=ASSMB;HOMSEQ=AGGGCGTGGAGAGCAGCCGGTTAC;MAPQ=60;MATEID=68680:2;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_2_3430001_3455001_33C;SPAN=183;SUBN=3;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:38:15.8:15.8,0,78.5:8:0:-15.73:18.19\n2\t3448762\t68680:2\tC\tC[2:3448579[\t15\tPASS\tEVDNC=ASSMB;HOMSEQ=AGGGCGTGGAGAGCAGCCGGTTAC;MAPQ=60;MATEID=68680:1;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_2_3430001_3455001_33C;SPAN=183;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:38:15.8:15.8,0,78.5:8:0:-15.73:18.19\n2\t3592332\t760178:1\tG\t[16:31103571[G\t25\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=CTCTCC;MAPQ=60;MATEID=760178:2;MATENM=4;NM=0;NUMPARTS=2;SCTG=c_16_31090501_31115501_14C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:17:15.2:25.1,0,15.2:8:2:-24.99:24.99\n2\t4274462\t933497:1\tC\t[X:64512169[C\t36\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=CA;MAPQ=60;MATEID=933497:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_23_64508501_64533501_2C;SPAN=-1;SUBN=2;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:12:5:3.3:36.3,3.3,0:7:5:-36.31:36.31\n2\t4733720\t69159:1\tA\tA[2:4739767[\t82\tPASS\tEVDNC=ASSMB;HOMSEQ=AAAAAAAAAAGATACTGCA;MAPQ=60;MATEID=69159:2;MATENM=5;NM=0;NUMPARTS=2;SCTG=c_2_4728501_4753501_22C;SPAN=6047;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:27:21:7.5:82.5,7.5,0:27:0:-82.52:82.52\n2\t4739767\t69159:2\tA\t]2:4733720]A\t82\tPASS\tEVDNC=ASSMB;HOMSEQ=AAAAAAAAAAGATACTGCA;MAPQ=60;MATEID=69159:1;MATENM=0;NM=5;NUMPARTS=2;SCTG=c_2_4728501_4753501_22C;SPAN=6047;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:27:21:7.5:82.5,7.5,0:27:0:-82.52:82.52\n2\t5022592\t69326:1\tA\t]2:5023212]A\t83\tPASS\tDISC_MAPQ=15;EVDNC=DSCRD;IMPRECISE;MAPQ=15;MATEID=69326:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=2:5022592(-)-2:5023212(+)__2_5022501_5047501D;SPAN=620;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:30:56:56.9:83.3,0,56.9:0:30:-83.54:83.54\n2\t5023212\t69326:2\tA\tA[2:5022592[\t83\tPASS\tDISC_MAPQ=50;EVDNC=DSCRD;IMPRECISE;MAPQ=50;MATEID=69326:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=2:5022592(-)-2:5023212(+)__2_5022501_5047501D;SPAN=620;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:30:56:56.9:83.3,0,56.9:0:30:-83.54:83.54\n2\t5347649\t69456:1\tT\tT[2:5347903[\t49\tPASS\tEVDNC=ASSMB;HOMSEQ=TCTTCTGAATTTCT;MAPQ=60;MATEID=69456:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_5341001_5366001_85C;SPAN=254;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:17:24:9.8:49.4,0,9.8:17:0:-50.74:50.74\n2\t5347903\t69456:2\tT\t]2:5347649]T\t49\tPASS\tEVDNC=ASSMB;HOMSEQ=TCTTCTGAATTTCT;MAPQ=60;MATEID=69456:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_5341001_5366001_85C;SPAN=254;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:17:24:9.8:49.4,0,9.8:17:0:-50.74:50.74\n2\t5987300\t69642:2\tG\tG]1:202207989]\t26\tPASS\tDISC_MAPQ=59;EVDNC=DSCRD;IMPRECISE;MAPQ=59;MATEID=69642:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:202207989(+)-2:5987300(+)__2_5978001_6003001D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:13:6.2:26,0,6.2:0:9:-26.69:26.69\n2\t5997703\t69640:2\tT\t[1:201949360[T\t31\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;MAPQ=60;MATEID=69640:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_2_5978001_6003001_1C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:18:11.6:31.4,0,11.6:8:5:-31.6:31.6\n2\t6260376\t69707:1\tC\tC[2:6262062[\t50\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=69707:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_2_6247501_6272501_84C;SPAN=1686;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:18:33:30.5:50.3,0,30.5:18:0:-50.33:50.33\n2\t6262062\t69707:2\tA\t]2:6260376]A\t50\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=69707:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_2_6247501_6272501_84C;SPAN=1686;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:18:33:30.5:50.3,0,30.5:18:0:-50.33:50.33\n2\t6495945\t69807:1\tG\t]2:6496024]G\t36\tPASS\tEVDNC=ASSMB;HOMSEQ=GCTTC;MAPQ=32;MATEID=69807:2;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_2_6492501_6517501_61C;SPAN=79;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:15:47:36.5:36.5,0,79.4:15:0:-36.3:37.28\n2\t6496024\t69807:2\tC\tC[2:6495945[\t36\tPASS\tEVDNC=ASSMB;HOMSEQ=GCTTC;MAPQ=60;MATEID=69807:1;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_2_6492501_6517501_61C;SPAN=79;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:15:47:36.5:36.5,0,79.4:15:0:-36.3:37.28\n2\t6658148\t69895:1\tC\tC[18:12202407[\t28\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=69895:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=2:6658148(+)-18:12202407(-)__2_6639501_6664501D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:15:8.9:28.7,0,8.9:0:10:-29.37:29.37\n2\t9998890\t70988:1\tA\t[13:85488927[A\t52\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TATATAT;MAPQ=60;MATEID=70988:2;MATENM=48;NM=0;NUMPARTS=2;SCTG=c_2_9996001_10021001_50C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:18:6:4.8:52.8,4.8,0:11:8:-52.81:52.81\n2\t10011510\t70991:1\tC\t]2:10013339]C\t25\tPASS\tDISC_MAPQ=43;EVDNC=DSCRD;IMPRECISE;MAPQ=43;MATEID=70991:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=2:10011510(-)-2:10013339(+)__2_9996001_10021001D;SPAN=1829;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:39:25.4:25.4,0,71.6:0:11:-25.35:26.63\n2\t10013339\t70991:2\tT\tT[2:10011510[\t25\tPASS\tDISC_MAPQ=51;EVDNC=DSCRD;IMPRECISE;MAPQ=51;MATEID=70991:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=2:10011510(-)-2:10013339(+)__2_9996001_10021001D;SPAN=1829;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:39:25.4:25.4,0,71.6:0:11:-25.35:26.63\n2\t10291379\t71120:1\tA\tA[2:10291576[\t65\tPASS\tEVDNC=ASSMB;INSERTION=TACGTATATACACATATATACGTATACATATACACGTATATATACATATATGTATACGTATACGTATACACGTATATATACATATG;MAPQ=60;MATEID=71120:2;MATENM=5;NM=0;NUMPARTS=2;SCTG=c_2_10290001_10315001_45C;SPAN=197;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:22:27:2.3:65,0,2.3:22:0:-68.44:68.44\n2\t10291576\t71120:2\tT\t]2:10291379]T\t65\tPASS\tEVDNC=ASSMB;INSERTION=TACGTATATACACATATATACGTATACATATACACGTATATATACATATATGTATACGTATACGTATACACGTATATATACATATG;MAPQ=60;MATEID=71120:1;MATENM=0;NM=5;NUMPARTS=2;SCTG=c_2_10290001_10315001_45C;SPAN=197;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:22:27:2.3:65,0,2.3:22:0:-68.44:68.44\n2\t10629240\t71249:1\tC\t]2:10629728]C\t13\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=71249:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=2:10629240(-)-2:10629728(+)__2_10608501_10633501D;SPAN=488;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:47:13.4:13.4,0,102.5:0:8:-13.2:17.36\n2\t10629241\t71250:1\tA\t]2:10629638]A\t35\tPASS\tEVDNC=ASSMB;INSERTION=TGCAAAGAAATGTAACAGAATTATTT;MAPQ=60;MATEID=71250:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_10608501_10633501_34C;SPAN=397;SUBN=4;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:15:49:35.9:35.9,0,85.4:15:0:-35.74:36.95\n2\t10629638\t71250:2\tA\tA[2:10629241[\t35\tPASS\tEVDNC=ASSMB;INSERTION=TGCAAAGAAATGTAACAGAATTATTT;MAPQ=60;MATEID=71250:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_10608501_10633501_34C;SPAN=397;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:15:49:35.9:35.9,0,85.4:15:0:-35.74:36.95\n2\t10629728\t71249:2\tT\tT[2:10629240[\t13\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=71249:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=2:10629240(-)-2:10629728(+)__2_10608501_10633501D;SPAN=488;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:47:13.4:13.4,0,102.5:0:8:-13.2:17.36\n2\t11380447\t71691:1\tA\tA[2:11380717[\t45\tPASS\tEVDNC=ASSMB;INSERTION=C;MAPQ=60;MATEID=71691:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_11368001_11393001_71C;SPAN=270;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:17:39:45.2:45.2,0,51.8:17:0:-45.15:45.19\n2\t11380717\t71691:2\tG\t]2:11380447]G\t45\tPASS\tEVDNC=ASSMB;INSERTION=C;MAPQ=60;MATEID=71691:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_11368001_11393001_71C;SPAN=270;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:17:39:45.2:45.2,0,51.8:17:0:-45.15:45.19\n2\t11853890\t71889:1\tG\t]2:11854829]G\t13\tPASS\tDISC_MAPQ=2;EVDNC=ASDIS;HOMSEQ=GATGATGCAGGGTGAGTGCTTAGACCCACTGCTTCCAGAATGCCTGTGCATTCACCCCGATGATGCAGGGTGAG;MAPQ=35;MATEID=71889:2;MATENM=9;NM=1;NUMPARTS=2;SCTG=c_2_11833501_11858501_84C;SPAN=939;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:45:13.7:13.7,0,99.5:8:2:-13.76:17.53\n2\t11854829\t71889:2\tG\tG[2:11853890[\t13\tPASS\tDISC_MAPQ=4;EVDNC=ASDIS;HOMSEQ=GATGATGCAGGGTGAGTGCTTAGACCCACTGCTTCCAGAATGCCTGTGCATTCACCCCGATGATGCAGGGTGAG;MAPQ=18;MATEID=71889:1;MATENM=1;NM=9;NUMPARTS=2;SCTG=c_2_11833501_11858501_84C;SPAN=939;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:45:13.7:13.7,0,99.5:8:2:-13.76:17.53\n2\t14239176\t72679:1\tT\tT[2:14245877[\t17\tPASS\tEVDNC=ASSMB;INSERTION=AACCTCACCT;MAPQ=60;MATEID=72679:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_14234501_14259501_51C;SPAN=6701;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:32:17.6:17.6,0,60.5:8:0:-17.41:18.87\n2\t14245877\t72679:2\tC\t]2:14239176]C\t17\tPASS\tEVDNC=ASSMB;INSERTION=AACCTCACCT;MAPQ=60;MATEID=72679:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_14234501_14259501_51C;SPAN=6701;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:32:17.6:17.6,0,60.5:8:0:-17.41:18.87\n2\t14391167\t72772:1\tC\tC[2:14391495[\t40\tPASS\tEVDNC=ASSMB;INSERTION=AATGTCA;MAPQ=60;MATEID=72772:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_14381501_14406501_96C;SPAN=328;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:22:13.7:40.1,0,13.7:14:0:-40.63:40.63\n2\t14391495\t72772:2\tT\t]2:14391167]T\t40\tPASS\tEVDNC=ASSMB;INSERTION=AATGTCA;MAPQ=60;MATEID=72772:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_14381501_14406501_96C;SPAN=328;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:22:13.7:40.1,0,13.7:14:0:-40.63:40.63\n2\t14564047\t72832:1\tG\tG[2:14569993[\t62\tPASS\tEVDNC=ASSMB;HOMSEQ=AG;MAPQ=60;MATEID=72832:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_14553001_14578001_5C;SPAN=5946;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:22:35:23.3:62.9,0,23.3:22:0:-63.65:63.65\n2\t14569993\t72832:2\tA\t]2:14564047]A\t62\tPASS\tEVDNC=ASSMB;HOMSEQ=AG;MAPQ=60;MATEID=72832:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_14553001_14578001_5C;SPAN=5946;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:22:35:23.3:62.9,0,23.3:22:0:-63.65:63.65\n2\t15475786\t73136:1\tA\t]2:15492424]A\t57\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=A;MAPQ=60;MATEID=73136:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_15484001_15509001_176C;SPAN=16638;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:20:29:14.9:57.8,0,14.9:18:9:-59.26:59.26\n2\t15492424\t73136:2\tA\tA[2:15475786[\t57\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=A;MAPQ=60;MATEID=73136:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_15484001_15509001_176C;SPAN=16638;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:20:29:14.9:57.8,0,14.9:18:9:-59.26:59.26\n2\t16110969\t73436:1\tT\tT[2:16111310[\t99\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;INSERTION=CTTCTCCACCCTCCG;MAPQ=60;MATEID=73436:2;MATENM=0;NM=4;NUMPARTS=2;SCTG=c_2_16096501_16121501_39C;SPAN=341;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:42:28:11.7:128.7,11.7,0:36:9:-128.7:128.7\n2\t16111310\t73436:2\tG\t]2:16110969]G\t99\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;INSERTION=CTTCTCCACCCTCCG;MAPQ=60;MATEID=73436:1;MATENM=4;NM=0;NUMPARTS=2;SCTG=c_2_16096501_16121501_39C;SPAN=341;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:42:28:11.7:128.7,11.7,0:36:9:-128.7:128.7\n2\t16131544\t73449:1\tG\tG[2:16133693[\t46\tPASS\tDISC_MAPQ=57;EVDNC=DSCRD;IMPRECISE;MAPQ=57;MATEID=73449:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=2:16131544(+)-2:16133693(-)__2_16121001_16146001D;SPAN=2149;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:16:6:4.2:46.2,4.2,0:0:16:-46.21:46.21\n2\t16133693\t73449:2\tA\t]2:16131544]A\t46\tPASS\tDISC_MAPQ=33;EVDNC=DSCRD;IMPRECISE;MAPQ=33;MATEID=73449:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=2:16131544(+)-2:16133693(-)__2_16121001_16146001D;SPAN=2149;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:16:6:4.2:46.2,4.2,0:0:16:-46.21:46.21\n2\t16224895\t73484:1\tT\tT]2:16225346]\t20\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=73484:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=2:16224895(+)-2:16225346(+)__2_16219001_16244001D;SPAN=451;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:33:20.6:20.6,0,60.2:0:9:-20.43:21.63\n2\t16225346\t73484:2\tT\tT]2:16224895]\t20\tPASS\tDISC_MAPQ=57;EVDNC=DSCRD;IMPRECISE;MAPQ=57;MATEID=73484:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=2:16224895(+)-2:16225346(+)__2_16219001_16244001D;SPAN=451;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:33:20.6:20.6,0,60.2:0:9:-20.43:21.63\n2\t18392977\t74156:1\tT\tT[2:18393259[\t30\tPASS\tEVDNC=ASSMB;HOMSEQ=GTGAAAGATCTTT;MAPQ=60;MATEID=74156:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_18375001_18400001_27C;SPAN=282;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:22:23.6:30.2,0,23.6:11:0:-30.15:30.15\n2\t18393259\t74156:2\tG\t]2:18392977]G\t30\tPASS\tEVDNC=ASSMB;HOMSEQ=GTGAAAGATCTTT;MAPQ=60;MATEID=74156:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_18375001_18400001_27C;SPAN=282;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:22:23.6:30.2,0,23.6:11:0:-30.15:30.15\n2\t19412343\t74443:1\tT\t]2:19424559]T\t18\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=74443:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=2:19412343(-)-2:19424559(+)__2_19404001_19429001D;SPAN=12216;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:39:18.8:18.8,0,78.2:0:9:-18.75:20.87\n2\t19424559\t74443:2\tC\tC[2:19412343[\t18\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=74443:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=2:19412343(-)-2:19424559(+)__2_19404001_19429001D;SPAN=12216;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:39:18.8:18.8,0,78.2:0:9:-18.75:20.87\n2\t19567822\t74511:1\tT\tT[2:19570802[\t46\tPASS\tEVDNC=ASSMB;HOMSEQ=GT;MAPQ=60;MATEID=74511:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_19551001_19576001_28C;SPAN=2980;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:16:24:13.1:46.1,0,13.1:16:0:-46.99:46.99\n2\t19570802\t74511:2\tG\t]2:19567822]G\t46\tPASS\tEVDNC=ASSMB;HOMSEQ=GT;MAPQ=60;MATEID=74511:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_19551001_19576001_28C;SPAN=2980;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:16:24:13.1:46.1,0,13.1:16:0:-46.99:46.99\n2\t20466917\t74769:1\tG\tG[2:20467212[\t49\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AAAATGCCATGTG;MAPQ=60;MATEID=74769:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_20457501_20482501_24C;SPAN=295;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:17:23:6.8:49.7,0,6.8:12:5:-51.34:51.34\n2\t20467212\t74769:2\tA\t]2:20466917]A\t49\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AAAATGCCATGTG;MAPQ=60;MATEID=74769:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_20457501_20482501_24C;SPAN=295;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:17:23:6.8:49.7,0,6.8:12:5:-51.34:51.34\n2\t20809619\t74841:1\tC\t]2:20845442]C\t37\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=74841:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_20825001_20850001_18C;SPAN=35823;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:30:37.7:37.7,0,37.7:14:0:-37.78:37.78\n2\t20845442\t74841:2\tA\tA[2:20809619[\t37\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=74841:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_20825001_20850001_18C;SPAN=35823;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:30:37.7:37.7,0,37.7:14:0:-37.78:37.78\n2\t21964098\t75152:1\tA\t]2:21970342]A\t19\tPASS\tEVDNC=ASSMB;HOMSEQ=AC;MAPQ=60;MATEID=75152:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_21952001_21977001_1C;SPAN=6244;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:50:19.1:19.1,0,104.9:10:0:-18.96:22.48\n2\t21970342\t75152:2\tC\tC[2:21964098[\t19\tPASS\tEVDNC=ASSMB;HOMSEQ=AC;MAPQ=60;MATEID=75152:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_21952001_21977001_1C;SPAN=6244;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:50:19.1:19.1,0,104.9:10:0:-18.96:22.48\n2\t21986910\t75157:1\tC\t]2:21995787]C\t27\tPASS\tEVDNC=ASSMB;INSERTION=AATT;MAPQ=60;MATEID=75157:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_21976501_22001501_19C;SPAN=8877;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:44:27.2:27.2,0,83.3:12:0:-27.24:28.84\n2\t21995787\t75157:2\tG\tG[2:21986910[\t27\tPASS\tEVDNC=ASSMB;INSERTION=AATT;MAPQ=60;MATEID=75157:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_21976501_22001501_19C;SPAN=8877;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:44:27.2:27.2,0,83.3:12:0:-27.24:28.84\n2\t26333431\t989648:1\tA\t[Un_KN707840v1_decoy:1[A\t89\tPASS\tDISC_MAPQ=255;EVDNC=TSI_L;MAPQ=60;MATEID=989648:2;MATENM=0;NM=0;NUMPARTS=3;SCTG=c_691_1_3298_13C;SPAN=-1;SUBN=3;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:29:10:8.1:89.1,8.1,0:29:0:-89.12:89.12\n2\t26714469\t996560:1\tG\t]Un_JTFH01000208v1_decoy:2601]G\t82\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=996560:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1051_1_2601_7C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:27:7:7.5:82.5,7.5,0:27:0:-82.52:82.52\n2\t30640060\t77857:1\tC\t]2:30738106]C\t33\tPASS\tEVDNC=ASSMB;HOMSEQ=C;MAPQ=60;MATEID=77857:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_30723001_30748001_4C;SPAN=98046;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:23:23.3:33.2,0,23.3:12:0:-33.21:33.21\n2\t30738106\t77857:2\tC\tC[2:30640060[\t33\tPASS\tEVDNC=ASSMB;HOMSEQ=C;MAPQ=60;MATEID=77857:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_30723001_30748001_4C;SPAN=98046;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:23:23.3:33.2,0,23.3:12:0:-33.21:33.21\n2\t31119875\t77958:1\tG\tG[2:31120175[\t92\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AAAAATAATGAGCTAG;MAPQ=60;MATEID=77958:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_31115001_31140001_98C;SPAN=300;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:29:30:8.4:92.4,8.4,0:22:10:-92.42:92.42\n2\t31120175\t77958:2\tA\t]2:31119875]A\t92\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AAAAATAATGAGCTAG;MAPQ=60;MATEID=77958:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_31115001_31140001_98C;SPAN=300;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:29:30:8.4:92.4,8.4,0:22:10:-92.42:92.42\n2\t31423208\t769777:1\tA\t[16:70087940[A\t99\tPASS\tDISC_MAPQ=59;EVDNC=ASDIS;MAPQ=60;MATEID=769777:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_16_70070001_70095001_81C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:35:14:9.6:105.6,9.6,0:26:21:-105.6:105.6\n2\t31823482\t78199:2\tT\t]1:58631258]T\t52\tPASS\tDISC_MAPQ=57;EVDNC=DSCRD;IMPRECISE;MAPQ=57;MATEID=78199:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:58631258(+)-2:31823482(-)__2_31801001_31826001D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:18:15:4.8:52.8,4.8,0:0:18:-52.81:52.81\n2\t32866671\t78642:1\tT\tT[2:32870557[\t56\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AAATATTCCAT;MAPQ=60;MATEID=78642:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_32854501_32879501_56C;SPAN=3886;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:19:23:0.2:56.3,0,0.2:11:12:-59.38:59.38\n2\t32870557\t78642:2\tA\t]2:32866671]A\t56\tPASS\tDISC_MAPQ=59;EVDNC=ASDIS;HOMSEQ=AAATATTCCAT;MAPQ=60;MATEID=78642:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_32854501_32879501_56C;SPAN=3886;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:19:23:0.2:56.3,0,0.2:11:12:-59.38:59.38\n2\t32999395\t78690:1\tA\tA[2:33002226[\t72\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=78690:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_33001501_33026501_15C;SPAN=2831;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:24:17:6.6:72.6,6.6,0:24:0:-72.62:72.62\n2\t33002226\t78690:2\tC\t]2:32999395]C\t72\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=78690:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_33001501_33026501_15C;SPAN=2831;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:24:17:6.6:72.6,6.6,0:24:0:-72.62:72.62\n2\t33894159\t926022:1\tT\t[X:11714296[T\t17\tPASS\tDISC_MAPQ=55;EVDNC=ASDIS;HOMSEQ=CA;MAPQ=60;MATEID=926022:2;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_23_11711001_11736001_46C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:7:20:17.6:17.6,0,30.8:3:5:-17.49:17.74\n2\t34298589\t79234:1\tG\tG[2:34300653[\t99\tPASS\tEVDNC=ASSMB;HOMSEQ=GG;MAPQ=60;MATEID=79234:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_34300001_34325001_16C;SPAN=2064;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:35:10:9.6:105.6,9.6,0:35:0:-105.6:105.6\n2\t34300653\t79234:2\tG\t]2:34298589]G\t99\tPASS\tEVDNC=ASSMB;HOMSEQ=GG;MAPQ=60;MATEID=79234:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_34300001_34325001_16C;SPAN=2064;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:35:10:9.6:105.6,9.6,0:35:0:-105.6:105.6\n2\t34418581\t79317:1\tT\tT[2:34418871[\t89\tPASS\tEVDNC=ASSMB;HOMSEQ=AACTCTCTTGGAATTTCT;MAPQ=60;MATEID=79317:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_2_34398001_34423001_92C;SPAN=290;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:29:15:8.1:89.1,8.1,0:29:0:-89.12:89.12\n2\t34418871\t79317:2\tA\t]2:34418581]A\t89\tPASS\tEVDNC=ASSMB;HOMSEQ=AACTCTCTTGGAATTTCT;MAPQ=60;MATEID=79317:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_2_34398001_34423001_92C;SPAN=290;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:29:15:8.1:89.1,8.1,0:29:0:-89.12:89.12\n2\t35865456\t80027:1\tA\tA[2:35865762[\t48\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AGAAATAAAGAGAAA;MAPQ=60;MATEID=80027:2;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_2_35843501_35868501_176C;SPAN=306;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:17:26:15.8:48.8,0,15.8:13:6:-49.68:49.68\n2\t35865762\t80027:2\tA\t]2:35865456]A\t48\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AGAAATAAAGAGAAA;MAPQ=60;MATEID=80027:1;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_2_35843501_35868501_176C;SPAN=306;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:17:26:15.8:48.8,0,15.8:13:6:-49.68:49.68\n2\t36728531\t80380:1\tT\tT[2:36728834[\t47\tPASS\tEVDNC=ASSMB;HOMSEQ=AAAGAAAAAATATT;MAPQ=60;MATEID=80380:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_36725501_36750501_23C;SPAN=303;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:16:20:1.1:47.3,0,1.1:16:0:-49.48:49.48\n2\t36728834\t80380:2\tA\t]2:36728531]A\t47\tPASS\tEVDNC=ASSMB;HOMSEQ=AAAGAAAAAATATT;MAPQ=60;MATEID=80380:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_36725501_36750501_23C;SPAN=303;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:16:20:1.1:47.3,0,1.1:16:0:-49.48:49.48\n2\t37848471\t80767:1\tC\t]2:37848614]C\t8\tPASS\tEVDNC=ASSMB;INSERTION=ATT;MAPQ=60;MATEID=80767:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_37828001_37853001_4C;SPAN=143;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:6:39:8.9:8.9,0,88.1:6:0:-8.844:12.73\n2\t37848614\t80767:2\tT\tT[2:37848471[\t8\tPASS\tEVDNC=ASSMB;INSERTION=ATT;MAPQ=60;MATEID=80767:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_37828001_37853001_4C;SPAN=143;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:6:39:8.9:8.9,0,88.1:6:0:-8.844:12.73\n2\t37874819\t80820:1\tG\t]2:38031160]G\t31\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;INSERTION=T;MAPQ=60;MATEID=80820:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_38024001_38049001_2C;SPAN=156341;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:17:8.6:31.7,0,8.6:8:7:-32.06:32.06\n2\t38031160\t80820:2\tT\tT[2:37874819[\t31\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;INSERTION=T;MAPQ=60;MATEID=80820:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_38024001_38049001_2C;SPAN=156341;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:17:8.6:31.7,0,8.6:8:7:-32.06:32.06\n2\t40326783\t81573:1\tG\t]2:40368222]G\t30\tPASS\tEVDNC=ASSMB;HOMSEQ=G;MAPQ=60;MATEID=81573:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_2_40351501_40376501_18C;SPAN=41439;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:32:30.8:30.8,0,47.3:12:0:-30.62:30.87\n2\t40368222\t81573:2\tG\tG[2:40326783[\t30\tPASS\tEVDNC=ASSMB;HOMSEQ=G;MAPQ=60;MATEID=81573:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_2_40351501_40376501_18C;SPAN=41439;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:32:30.8:30.8,0,47.3:12:0:-30.62:30.87\n2\t40670800\t81728:1\tC\t]2:40734469]C\t29\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=CT;MAPQ=60;MATEID=81728:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_40719001_40744001_102C;SPAN=63669;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:26:29:29,0,35.6:6:10:-29:29.05\n2\t40734469\t81728:2\tT\tT[2:40670800[\t29\tPASS\tDISC_MAPQ=54;EVDNC=ASDIS;HOMSEQ=CT;MAPQ=60;MATEID=81728:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_40719001_40744001_102C;SPAN=63669;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:26:29:29,0,35.6:6:10:-29:29.05\n2\t40869772\t81804:2\tT\tT[1:73903568[\t18\tPASS\tEVDNC=ASSMB;INSERTION=GAT;MAPQ=60;MATEID=81804:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_40866001_40891001_21C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:7:18:18.2:18.2,0,24.8:7:0:-18.05:18.15\n2\t41011229\t81856:1\tA\tA[2:41023154[\t36\tPASS\tEVDNC=ASSMB;HOMSEQ=AGA;MAPQ=60;MATEID=81856:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_41013001_41038001_41C;SPAN=11925;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:12:12:3.3:36.3,3.3,0:12:0:-36.31:36.31\n2\t41023154\t81856:2\tA\t]2:41011229]A\t36\tPASS\tEVDNC=ASSMB;HOMSEQ=AGA;MAPQ=60;MATEID=81856:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_41013001_41038001_41C;SPAN=11925;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:12:12:3.3:36.3,3.3,0:12:0:-36.31:36.31\n2\t41825584\t234074:1\tT\tT[4:65548212[\t49\tPASS\tDISC_MAPQ=50;EVDNC=DSCRD;IMPRECISE;MAPQ=50;MATEID=234074:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=2:41825584(+)-4:65548212(-)__4_65537501_65562501D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:17:7:4.5:49.5,4.5,0:0:17:-49.51:49.51\n2\t42431514\t82399:1\tA\t]2:42651232]A\t35\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AAGT;MAPQ=60;MATEID=82399:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_42630001_42655001_20C;SPAN=219718;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:17:5.3:35,0,5.3:6:8:-35.78:35.78\n2\t42651232\t82399:2\tT\tT[2:42431514[\t35\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AAGT;MAPQ=60;MATEID=82399:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_42630001_42655001_20C;SPAN=219718;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:17:5.3:35,0,5.3:6:8:-35.78:35.78\n2\t43431646\t82614:1\tT\tT[2:43432156[\t6\tPASS\tEVDNC=ASSMB;HOMSEQ=AATTTTTTGTACTTTT;MAPQ=60;MATEID=82614:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_2_43414001_43439001_54C;SPAN=510;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:5:36:6.5:6.5,0,82.4:5:0:-6.386:10.37\n2\t43432156\t82614:2\tA\t]2:43431646]A\t6\tPASS\tEVDNC=ASSMB;HOMSEQ=AATTTTTTGTACTTTT;MAPQ=60;MATEID=82614:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_2_43414001_43439001_54C;SPAN=510;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:5:36:6.5:6.5,0,82.4:5:0:-6.386:10.37\n2\t44240073\t82829:1\tC\tC[2:44241692[\t42\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=82829:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=2:44240073(+)-2:44241692(-)__2_44222501_44247501D;SPAN=1619;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:14:3:3.9:42.9,3.9,0:0:14:-42.91:42.91\n2\t44241692\t82829:2\tA\t]2:44240073]A\t42\tPASS\tDISC_MAPQ=56;EVDNC=DSCRD;IMPRECISE;MAPQ=56;MATEID=82829:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=2:44240073(+)-2:44241692(-)__2_44222501_44247501D;SPAN=1619;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:14:3:3.9:42.9,3.9,0:0:14:-42.91:42.91\n2\t47092142\t948741:1\tG\t[X:154456620[G\t56\tPASS\tDISC_MAPQ=55;EVDNC=ASDIS;HOMSEQ=G;MAPQ=60;MATEID=948741:2;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_23_154448001_154473001_7C;SPAN=-1;SUBN=1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:19:7:5.1:56.1,5.1,0:12:9:-56.11:56.11\n2\t47385991\t83671:1\tC\t]2:47440172]C\t46\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=83671:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_47432001_47457001_26C;SPAN=54181;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:16:14:4.2:46.2,4.2,0:16:0:-46.21:46.21\n2\t47440172\t83671:2\tT\tT[2:47385991[\t46\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=83671:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_47432001_47457001_26C;SPAN=54181;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:16:14:4.2:46.2,4.2,0:16:0:-46.21:46.21\n2\t47582850\t914841:1\tT\t[22:23853676[T\t47\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TA;MAPQ=60;MATEID=914841:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_22_23838501_23863501_79C;SPAN=-1;SUBN=1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:16:20:1.1:47.3,0,1.1:15:2:-49.48:49.48\n2\t48624053\t84132:1\tA\tA[2:48630814[\t58\tPASS\tEVDNC=ASSMB;HOMSEQ=TA;MAPQ=60;MATEID=84132:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_48608001_48633001_62C;SPAN=6761;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:20:26:5.9:58.7,0,5.9:20:0:-61.11:61.11\n2\t48630814\t84132:2\tT\t]2:48624053]T\t58\tPASS\tEVDNC=ASSMB;HOMSEQ=TA;MAPQ=60;MATEID=84132:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_48608001_48633001_62C;SPAN=6761;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:20:26:5.9:58.7,0,5.9:20:0:-61.11:61.11\n2\t49385759\t84300:1\tT\tT[2:49386067[\t89\tPASS\tEVDNC=ASSMB;HOMSEQ=CAATATTTTTACTCTT;MAPQ=60;MATEID=84300:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_2_49367501_49392501_53C;SPAN=308;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:29:24:8.1:89.1,8.1,0:29:0:-89.12:89.12\n2\t49386067\t84300:2\tC\t]2:49385759]C\t89\tPASS\tEVDNC=ASSMB;HOMSEQ=CAATATTTTTACTCTT;MAPQ=60;MATEID=84300:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_2_49367501_49392501_53C;SPAN=308;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:29:24:8.1:89.1,8.1,0:29:0:-89.12:89.12\n2\t49597021\t84369:1\tA\tA[2:49597348[\t19\tPASS\tEVDNC=ASSMB;HOMSEQ=A;MAPQ=60;MATEID=84369:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_49588001_49613001_28C;SPAN=327;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:25:19.4:19.4,0,42.5:8:0:-19.38:19.89\n2\t49597348\t84369:2\tA\t]2:49597021]A\t19\tPASS\tEVDNC=ASSMB;HOMSEQ=A;MAPQ=60;MATEID=84369:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_49588001_49613001_28C;SPAN=327;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:25:19.4:19.4,0,42.5:8:0:-19.38:19.89\n2\t49725367\t84398:1\tT\t]2:49726478]T\t38\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TCA;MAPQ=60;MATEID=84398:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_49710501_49735501_34C;SPAN=1111;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:15:39:38.6:38.6,0,58.4:11:11:-38.55:38.8\n2\t49726478\t84398:2\tA\tA[2:49725367[\t38\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TCA;MAPQ=60;MATEID=84398:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_49710501_49735501_34C;SPAN=1111;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:15:39:38.6:38.6,0,58.4:11:11:-38.55:38.8\n2\t49836216\t84429:1\tG\t]2:49842728]G\t23\tPASS\tEVDNC=ASSMB;HOMSEQ=G;MAPQ=60;MATEID=84429:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_49833001_49858001_8C;SPAN=6512;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:34:23.6:23.6,0,59.9:10:0:-23.45:24.42\n2\t49842728\t84429:2\tG\tG[2:49836216[\t23\tPASS\tEVDNC=ASSMB;HOMSEQ=G;MAPQ=60;MATEID=84429:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_49833001_49858001_8C;SPAN=6512;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:34:23.6:23.6,0,59.9:10:0:-23.45:24.42\n2\t50587435\t84741:1\tT\tT]2:50589480]\t52\tPASS\tDISC_MAPQ=45;EVDNC=DSCRD;IMPRECISE;MAPQ=45;MATEID=84741:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=2:50587435(+)-2:50589480(+)__2_50568001_50593001D;SPAN=2045;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:18:18:4.8:52.8,4.8,0:0:18:-52.81:52.81\n2\t50589480\t84741:2\tC\tC]2:50587435]\t52\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=84741:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=2:50587435(+)-2:50589480(+)__2_50568001_50593001D;SPAN=2045;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:18:18:4.8:52.8,4.8,0:0:18:-52.81:52.81\n2\t54338356\t85639:1\tG\tG[2:54340337[\t99\tPASS\tEVDNC=ASSMB;INSERTION=TAA;MAPQ=60;MATEID=85639:2;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_2_54316501_54341501_38C;SPAN=1981;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:42:21:11.7:128.7,11.7,0:42:0:-128.7:128.7\n2\t54340337\t85639:2\tA\t]2:54338356]A\t99\tPASS\tEVDNC=ASSMB;INSERTION=TAA;MAPQ=60;MATEID=85639:1;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_2_54316501_54341501_38C;SPAN=1981;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:42:21:11.7:128.7,11.7,0:42:0:-128.7:128.7\n2\t54466357\t85680:1\tT\tT[2:54466606[\t49\tPASS\tEVDNC=ASSMB;HOMSEQ=AAGTATGTTTATTCTT;MAPQ=60;MATEID=85680:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_54463501_54488501_20C;SPAN=249;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:20:60:49.1:49.1,0,101.9:20:0:-49.15:50.17\n2\t54466606\t85680:2\tA\t]2:54466357]A\t49\tPASS\tEVDNC=ASSMB;HOMSEQ=AAGTATGTTTATTCTT;MAPQ=60;MATEID=85680:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_54463501_54488501_20C;SPAN=249;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:20:60:49.1:49.1,0,101.9:20:0:-49.15:50.17\n2\t55567377\t86186:1\tT\t]2:55678660]T\t21\tPASS\tEVDNC=ASSMB;HOMSEQ=TTC;MAPQ=60;MATEID=86186:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_55664001_55689001_27C;SPAN=111283;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:28:21.8:21.8,0,48.2:9:0:-21.84:22.4\n2\t55633365\t86159:1\tG\tG[2:55633523[\t28\tPASS\tEVDNC=ASSMB;HOMSEQ=TCCCAGCTACTGGGGAGGCTGAG;MAPQ=60;MATEID=86159:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_2_55615001_55640001_46C;SPAN=158;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:18:14.9:28.1,0,14.9:10:0:-28.08:28.08\n2\t55633523\t86159:2\tT\t]2:55633365]T\t28\tPASS\tEVDNC=ASSMB;HOMSEQ=TCCCAGCTACTGGGGAGGCTGAG;MAPQ=60;MATEID=86159:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_2_55615001_55640001_46C;SPAN=158;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:18:14.9:28.1,0,14.9:10:0:-28.08:28.08\n2\t55678660\t86186:2\tC\tC[2:55567377[\t21\tPASS\tEVDNC=ASSMB;HOMSEQ=TTC;MAPQ=60;MATEID=86186:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_55664001_55689001_27C;SPAN=111283;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:28:21.8:21.8,0,48.2:9:0:-21.84:22.4\n2\t55843973\t86245:1\tA\tA[2:55844263[\t99\tPASS\tDISC_MAPQ=59;EVDNC=ASDIS;HOMSEQ=A;MAPQ=60;MATEID=86245:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_55835501_55860501_48C;SPAN=290;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:34:28:9.3:102.3,9.3,0:26:10:-102.3:102.3\n2\t55844263\t86245:2\tA\t]2:55843973]A\t99\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=A;MAPQ=60;MATEID=86245:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_55835501_55860501_48C;SPAN=290;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:34:28:9.3:102.3,9.3,0:26:10:-102.3:102.3\n2\t57115608\t86554:1\tT\tT[2:57115922[\t35\tPASS\tEVDNC=ASSMB;HOMSEQ=GCTAGTAGCTTTTT;MAPQ=60;MATEID=86554:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_57109501_57134501_28C;SPAN=314;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:17:5.3:35,0,5.3:12:0:-35.78:35.78\n2\t57115922\t86554:2\tG\t]2:57115608]G\t35\tPASS\tEVDNC=ASSMB;HOMSEQ=GCTAGTAGCTTTTT;MAPQ=60;MATEID=86554:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_57109501_57134501_28C;SPAN=314;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:17:5.3:35,0,5.3:12:0:-35.78:35.78\n2\t61473639\t87757:1\tT\t[2:61476025[T\t55\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=CCTCAGCCTCCCCAGTAGCTGGGA;MAPQ=60;MATEID=87757:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_2_61470501_61495501_64C;SPAN=2386;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:19:27:12.2:55.1,0,12.2:14:10:-56.6:56.6\n2\t61476025\t87757:2\tC\t[2:61473639[C\t55\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=CCTCAGCCTCCCCAGTAGCTGGGA;MAPQ=60;MATEID=87757:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_2_61470501_61495501_64C;SPAN=2386;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:19:27:12.2:55.1,0,12.2:14:10:-56.6:56.6\n2\t65580385\t89177:1\tT\tT[2:65580684[\t85\tPASS\tEVDNC=ASSMB;HOMSEQ=CATGTTACTTTT;MAPQ=60;MATEID=89177:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_2_65562001_65587001_72C;SPAN=299;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:28:16:7.8:85.8,7.8,0:28:0:-85.82:85.82\n2\t65580684\t89177:2\tC\t]2:65580385]C\t85\tPASS\tEVDNC=ASSMB;HOMSEQ=CATGTTACTTTT;MAPQ=60;MATEID=89177:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_2_65562001_65587001_72C;SPAN=299;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:28:16:7.8:85.8,7.8,0:28:0:-85.82:85.82\n2\t66278462\t89363:1\tT\tT[2:66280422[\t19\tPASS\tEVDNC=ASSMB;HOMSEQ=TATAT;MAPQ=60;MATEID=89363:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_66272501_66297501_17C;SPAN=1960;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:26:19.1:19.1,0,45.5:8:0:-19.1:19.73\n2\t66280422\t89363:2\tT\t]2:66278462]T\t19\tPASS\tEVDNC=ASSMB;HOMSEQ=TATAT;MAPQ=60;MATEID=89363:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_66272501_66297501_17C;SPAN=1960;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:26:19.1:19.1,0,45.5:8:0:-19.1:19.73\n2\t66762898\t89508:1\tT\t]2:66763041]T\t65\tPASS\tEVDNC=ASSMB;HOMSEQ=TATATGTGTGTATATATA;MAPQ=60;MATEID=89508:2;MATENM=1;NM=8;NUMPARTS=2;SCTG=c_2_66762501_66787501_12C;SPAN=143;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:23:37:26:65.6,0,26:23:0:-66.36:66.36\n2\t66763041\t89508:2\tA\tA[2:66762898[\t65\tPASS\tEVDNC=ASSMB;HOMSEQ=TATATGTGTGTATATATA;MAPQ=60;MATEID=89508:1;MATENM=8;NM=1;NUMPARTS=2;SCTG=c_2_66762501_66787501_12C;SPAN=143;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:23:37:26:65.6,0,26:23:0:-66.36:66.36\n2\t68687723\t297711:1\tT\tT]5:65172244]\t26\tPASS\tDISC_MAPQ=33;EVDNC=DSCRD;IMPRECISE;MAPQ=33;MATEID=297711:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=2:68687723(+)-5:65172244(+)__5_65170001_65195001D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:8:9:2.4:26.4,2.4,0:0:8:-25.7:25.7\n2\t68687747\t90165:2\tT\tT[1:37472656[\t41\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;INSERTION=ATTATTAG;MAPQ=60;MATEID=90165:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_68673501_68698501_14C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:19:4.7:41,0,4.7:9:10:-42.24:42.24\n2\t68687751\t90166:2\tC\t]1:37472775]C\t56\tPASS\tEVDNC=ASSMB;HOMSEQ=CCAG;MAPQ=60;MATEID=90166:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_2_68673501_68698501_111C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:19:18:5.1:56.1,5.1,0:19:0:-56.11:56.11\n2\t70434172\t556451:1\tT\tT]10:77573728]\t10\tPASS\tDISC_MAPQ=60;EVDNC=TSI_L;HOMSEQ=ATAGAATAGAATAGAATAG;INSERTION=C;MAPQ=60;MATEID=556451:2;MATENM=0;NM=0;NUMPARTS=3;REPSEQ=AGATAAGATAAGATAAGATAAGATAAGATAAGATAAGATAAGATAAGATA;SCTG=c_10_77567001_77592001_32C;SPAN=-1;SUBN=1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:19:3.4:10.3,0,3.4:2:9:-10.19:10.19\n2\t71662937\t91046:1\tT\t]2:71663041]T\t40\tPASS\tEVDNC=ASSMB;HOMSEQ=TGTGTGTG;MAPQ=60;MATEID=91046:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_71662501_71687501_16C;SPAN=104;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:17:55:40.7:40.7,0,96.8:17:0:-40.66:41.96\n2\t71663041\t91046:2\tG\tG[2:71662937[\t40\tPASS\tEVDNC=ASSMB;HOMSEQ=TGTGTGTG;MAPQ=60;MATEID=91046:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_71662501_71687501_16C;SPAN=104;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:17:55:40.7:40.7,0,96.8:17:0:-40.66:41.96\n2\t74269063\t91744:1\tA\t]2:74518704]A\t29\tPASS\tEVDNC=ASSMB;INSERTION=TC;MAPQ=60;MATEID=91744:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_74504501_74529501_22C;SPAN=249641;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:23:26.6:29.9,0,26.6:11:0:-29.85:29.85\n2\t74518704\t91744:2\tT\tT[2:74269063[\t29\tPASS\tEVDNC=ASSMB;INSERTION=TC;MAPQ=60;MATEID=91744:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_74504501_74529501_22C;SPAN=249641;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:23:26.6:29.9,0,26.6:11:0:-29.85:29.85\n2\t74561101\t652191:1\tA\t[12:126832129[A\t51\tPASS\tDISC_MAPQ=9;EVDNC=ASDIS;HOMSEQ=CTCCTCCTCCTTCTCCTCCTCCTCCTTCTCCTCCTCCTCCTTCTCCTCCTCCT;MAPQ=37;MATEID=652191:2;MATENM=0;NM=8;NUMPARTS=2;SCTG=c_12_126812001_126837001_50C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:18:27:15.5:51.8,0,15.5:12:4:-52.86:52.86\n2\t76299386\t92375:1\tT\tT[2:76301768[\t66\tPASS\tEVDNC=ASSMB;HOMSEQ=GTTTTCCATGTTTT;MAPQ=60;MATEID=92375:2;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_2_76293001_76318001_29C;SPAN=2382;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:22:16:6:66,6,0:22:0:-66.02:66.02\n2\t76301768\t92375:2\tG\t]2:76299386]G\t66\tPASS\tEVDNC=ASSMB;HOMSEQ=GTTTTCCATGTTTT;MAPQ=60;MATEID=92375:1;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_2_76293001_76318001_29C;SPAN=2382;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:22:16:6:66,6,0:22:0:-66.02:66.02\n2\t76546427\t92510:1\tT\tT[2:76548327[\t99\tPASS\tEVDNC=ASSMB;INSERTION=TTATTCTTTTA;MAPQ=60;MATEID=92510:2;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_2_76538001_76563001_108C;SPAN=1900;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:37:21:10.2:112.2,10.2,0:37:0:-112.2:112.2\n2\t76548327\t92510:2\tA\t]2:76546427]A\t99\tPASS\tEVDNC=ASSMB;INSERTION=TTATTCTTTTA;MAPQ=60;MATEID=92510:1;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_2_76538001_76563001_108C;SPAN=1900;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:37:21:10.2:112.2,10.2,0:37:0:-112.2:112.2\n2\t77890765\t92950:1\tA\tA[2:77891232[\t59\tPASS\tEVDNC=ASSMB;HOMSEQ=A;MAPQ=60;MATEID=92950:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_77885501_77910501_43C;SPAN=467;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:20:25:2.9:59,0,2.9:20:0:-61.85:61.85\n2\t77891232\t92950:2\tA\t]2:77890765]A\t59\tPASS\tEVDNC=ASSMB;HOMSEQ=A;MAPQ=60;MATEID=92950:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_77885501_77910501_43C;SPAN=467;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:20:25:2.9:59,0,2.9:20:0:-61.85:61.85\n2\t78714738\t93188:1\tA\tA[2:78715161[\t28\tPASS\tEVDNC=ASSMB;HOMSEQ=A;MAPQ=60;MATEID=93188:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_78694001_78719001_1C;SPAN=423;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:41:28.1:28.1,0,74.3:12:0:-28.09:29.28\n2\t78715161\t93188:2\tA\t]2:78714738]A\t28\tPASS\tEVDNC=ASSMB;HOMSEQ=A;MAPQ=60;MATEID=93188:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_78694001_78719001_1C;SPAN=423;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:41:28.1:28.1,0,74.3:12:0:-28.09:29.28\n2\t78830532\t93233:1\tT\tT[2:78830858[\t48\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=ATGAGTTTCTT;MAPQ=60;MATEID=93233:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_2_78816501_78841501_72C;SPAN=326;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:17:27:18.8:48.5,0,18.8:11:7:-49.21:49.21\n2\t78830858\t93233:2\tA\t]2:78830532]A\t48\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=ATGAGTTTCTT;MAPQ=60;MATEID=93233:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_2_78816501_78841501_72C;SPAN=326;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:17:27:18.8:48.5,0,18.8:11:7:-49.21:49.21\n2\t82135166\t94181:1\tC\tC[2:82135354[\t49\tPASS\tEVDNC=ASSMB;HOMSEQ=CTATCTATCTATC;MAPQ=60;MATEID=94181:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_2_82124001_82149001_9C;SPAN=188;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:17:25:12.8:49.1,0,12.8:17:0:-50.18:50.18\n2\t82135354\t94181:2\tC\t]2:82135166]C\t49\tPASS\tEVDNC=ASSMB;HOMSEQ=CTATCTATCTATC;MAPQ=60;MATEID=94181:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_2_82124001_82149001_9C;SPAN=188;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:17:25:12.8:49.1,0,12.8:17:0:-50.18:50.18\n2\t83176495\t94386:1\tT\tT[2:83178048[\t35\tPASS\tEVDNC=ASSMB;HOMSEQ=GT;MAPQ=60;MATEID=94386:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_83177501_83202501_120C;SPAN=1553;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:16:2.3:35.3,0,2.3:12:0:-36.39:36.39\n2\t83178048\t94386:2\tG\t]2:83176495]G\t35\tPASS\tEVDNC=ASSMB;HOMSEQ=GT;MAPQ=60;MATEID=94386:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_83177501_83202501_120C;SPAN=1553;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:16:2.3:35.3,0,2.3:12:0:-36.39:36.39\n2\t85291998\t94967:1\tT\tT[2:85292320[\t29\tPASS\tEVDNC=ASSMB;HOMSEQ=GGTCATATGTATTTTT;MAPQ=60;MATEID=94967:2;MATENM=0;NM=5;NUMPARTS=2;SCTG=c_2_85284501_85309501_12C;SPAN=322;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:15:71:29.6:29.6,0,148.4:15:0:-29.56:34.13\n2\t85292320\t94967:2\tG\t]2:85291998]G\t29\tPASS\tEVDNC=ASSMB;HOMSEQ=GGTCATATGTATTTTT;MAPQ=60;MATEID=94967:1;MATENM=5;NM=0;NUMPARTS=2;SCTG=c_2_85284501_85309501_12C;SPAN=322;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:15:71:29.6:29.6,0,148.4:15:0:-29.56:34.13\n2\t85486995\t922294:1\tC\t]22:49029656]C\t26\tPASS\tDISC_MAPQ=15;EVDNC=ASDIS;INSERTION=G;MAPQ=60;MATEID=922294:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_22_49024501_49049501_90C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:9:7:2.4:26.4,2.4,0:7:4:-26.41:26.41\n2\t85510440\t95053:1\tC\tC[2:85510844[\t5\tPASS\tEVDNC=ASSMB;HOMSEQ=GTGATCCGCCCACCTCGGC;MAPQ=60;MATEID=95053:2;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_2_85505001_85530001_92C;SPAN=404;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:5:40:5.3:5.3,0,94.4:5:0:-5.261:10.13\n2\t85510844\t95053:2\tG\t]2:85510440]G\t5\tPASS\tEVDNC=ASSMB;HOMSEQ=GTGATCCGCCCACCTCGGC;MAPQ=60;MATEID=95053:1;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_2_85505001_85530001_92C;SPAN=404;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:5:40:5.3:5.3,0,94.4:5:0:-5.261:10.13\n2\t87411927\t95712:1\tA\t]2:87415975]A\t35\tPASS\tDISC_MAPQ=38;EVDNC=DSCRD;IMPRECISE;MAPQ=38;MATEID=95712:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=2:87411927(-)-2:87415975(+)__2_87391501_87416501D;SPAN=4048;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:15:50:35.6:35.6,0,88.4:0:15:-35.46:36.79\n2\t87415975\t95712:2\tG\tG[2:87411927[\t35\tPASS\tDISC_MAPQ=18;EVDNC=DSCRD;IMPRECISE;MAPQ=18;MATEID=95712:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=2:87411927(-)-2:87415975(+)__2_87391501_87416501D;SPAN=4048;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:15:50:35.6:35.6,0,88.4:0:15:-35.46:36.79\n2\t88301312\t96152:1\tT\tT[2:88301624[\t40\tPASS\tEVDNC=ASSMB;HOMSEQ=GAGACCTACTTTCTT;MAPQ=60;MATEID=96152:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_2_88298001_88323001_127C;SPAN=312;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:22:13.7:40.1,0,13.7:14:0:-40.63:40.63\n2\t88301624\t96152:2\tG\t]2:88301312]G\t40\tPASS\tEVDNC=ASSMB;HOMSEQ=GAGACCTACTTTCTT;MAPQ=60;MATEID=96152:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_2_88298001_88323001_127C;SPAN=312;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:22:13.7:40.1,0,13.7:14:0:-40.63:40.63\n2\t88729728\t96278:1\tG\tG[2:88732766[\t30\tPASS\tEVDNC=ASSMB;HOMSEQ=GAAAATATTAAAACTAAG;MAPQ=60;MATEID=96278:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_88714501_88739501_14C;SPAN=3038;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:15:68:30.5:30.5,0,139.4:15:0:-30.4:34.45\n2\t88732766\t96278:2\tG\t]2:88729728]G\t30\tPASS\tEVDNC=ASSMB;HOMSEQ=GAAAATATTAAAACTAAG;MAPQ=60;MATEID=96278:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_88714501_88739501_14C;SPAN=3038;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:15:68:30.5:30.5,0,139.4:15:0:-30.4:34.45\n2\t90371363\t96983:1\tT\tT[10:15915313[\t92\tPASS\tDISC_MAPQ=1;EVDNC=ASDIS;INSERTION=TTTTTTTTTA;MAPQ=14;MATEID=96983:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_2_90356001_90381001_107C;SPAN=-1;SUBN=6;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:35:81:92.9:92.9,0,109.4:27:14:-92.77:92.86\n2\t91409350\t97080:1\tA\tA]16:34954400]\t99\tPASS\tDISC_MAPQ=30;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=97080:2;MATENM=2;NM=5;NUMPARTS=2;SCTG=c_2_91385001_91410001_138C;SPAN=-1;SUBN=3;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:38:38:10.5:115.5,10.5,0:27:15:-115.5:115.5\n2\t91412660\t97181:1\tC\tC[2:91412842[\t55\tPASS\tDISC_MAPQ=255;EVDNC=TSI_G;HOMSEQ=AATCATC;INSERTION=TCGAATGGAATCATCATTGAGTGTAATCGAATGG;MAPQ=60;MATEID=97181:2;MATENM=3;NM=2;NUMPARTS=3;SCTG=c_2_91409501_91434501_201C;SECONDARY;SPAN=182;SUBN=1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:30:157:55.1:55.1,0,338.9:30:0:-54.9:66.78\n2\t91412842\t97181:2\tA\t]2:91412660]A\t55\tPASS\tDISC_MAPQ=255;EVDNC=TSI_G;HOMSEQ=AATCATC;INSERTION=TCGAATGGAATCATCATTGAGTGTAATCGAATGG;MAPQ=60;MATEID=97181:1;MATENM=2;NM=3;NUMPARTS=3;SCTG=c_2_91409501_91434501_201C;SECONDARY;SPAN=182;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:30:157:55.1:55.1,0,338.9:30:0:-54.9:66.78\n2\t91530893\t97619:1\tT\t]2:91531369]T\t51\tPASS\tDISC_MAPQ=34;EVDNC=ASDIS;HOMSEQ=TTTATGTTATATATAATATAAACATGATGTATATTCTTAT;MAPQ=12;MATEID=97619:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_91507501_91532501_165C;SPAN=476;SUBN=4;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:25:112:51.2:51.2,0,229.4:24:4:-51.04:57.56\n2\t91531369\t97619:2\tT\tT[2:91530893[\t51\tPASS\tDISC_MAPQ=3;EVDNC=ASDIS;HOMSEQ=TTTATGTTATATATAATATAAACATGATGTATATTCTTAT;MAPQ=15;MATEID=97619:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_91507501_91532501_165C;SPAN=476;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:25:112:51.2:51.2,0,229.4:24:4:-51.04:57.56\n2\t92308749\t98845:1\tA\t]2:93108543]A\t19\tPASS\tDISC_MAPQ=19;EVDNC=DSCRD;IMPRECISE;MAPQ=19;MATEID=98845:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=2:92308749(-)-2:93108543(+)__2_93100001_93125001D;SPAN=799794;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:24:19.7:19.7,0,39.5:0:8:-19.66:20.07\n2\t92651208\t98625:1\tA\tA[2:92867362[\t24\tPASS\tDISC_MAPQ=16;EVDNC=DSCRD;IMPRECISE;MAPQ=16;MATEID=98625:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=2:92651208(+)-2:92867362(-)__2_92855001_92880001D;SPAN=216154;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:32:24.2:24.2,0,53.9:0:10:-24.02:24.74\n2\t92743347\t98519:1\tC\tC[2:94054277[\t14\tPASS\tDISC_MAPQ=21;EVDNC=DSCRD;IMPRECISE;MAPQ=21;MATEID=98519:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=2:92743347(+)-2:94054277(-)__2_92732501_92757501D;SPAN=1310930;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:42:14.6:14.6,0,90.5:0:8:-14.6:17.8\n2\t92867362\t98625:2\tT\t]2:92651208]T\t24\tPASS\tDISC_MAPQ=21;EVDNC=DSCRD;IMPRECISE;MAPQ=21;MATEID=98625:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=2:92651208(+)-2:92867362(-)__2_92855001_92880001D;SPAN=216154;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:32:24.2:24.2,0,53.9:0:10:-24.02:24.74\n2\t92875179\t98636:1\tG\tG[2:93532754[\t37\tPASS\tDISC_MAPQ=31;EVDNC=DSCRD;IMPRECISE;MAPQ=31;MATEID=98636:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=2:92875179(+)-2:93532754(-)__2_92855001_92880001D;SPAN=657575;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:19:8:37.7,0,8:0:13:-38.44:38.44\n2\t93108543\t98845:2\tT\tT[2:92308749[\t19\tPASS\tDISC_MAPQ=29;EVDNC=DSCRD;IMPRECISE;MAPQ=29;MATEID=98845:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=2:92308749(-)-2:93108543(+)__2_93100001_93125001D;SPAN=799794;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:24:19.7:19.7,0,39.5:0:8:-19.66:20.07\n2\t93450067\t99624:1\tA\tA[2:94089858[\t22\tPASS\tDISC_MAPQ=15;EVDNC=DSCRD;IMPRECISE;MAPQ=15;MATEID=99624:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=2:93450067(+)-2:94089858(-)__2_94080001_94105001D;SPAN=639791;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:13:9.5:22.7,0,9.5:0:8:-23.02:23.02\n2\t93469219\t99143:1\tT\t]2:93647620]T\t26\tPASS\tDISC_MAPQ=15;EVDNC=DSCRD;IMPRECISE;MAPQ=15;MATEID=99143:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=2:93469219(-)-2:93647620(+)__2_93467501_93492501D;SPAN=178401;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:9:9:2.4:26.4,2.4,0:0:9:-26.41:26.41\n2\t93532754\t98636:2\tC\t]2:92875179]C\t37\tPASS\tDISC_MAPQ=22;EVDNC=DSCRD;IMPRECISE;MAPQ=22;MATEID=98636:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=2:92875179(+)-2:93532754(-)__2_92855001_92880001D;SPAN=657575;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:19:8:37.7,0,8:0:13:-38.44:38.44\n2\t93574645\t99223:1\tG\t]2:93889839]G\t39\tPASS\tDISC_MAPQ=16;EVDNC=DSCRD;IMPRECISE;MAPQ=16;MATEID=99223:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=2:93574645(-)-2:93889839(+)__2_93565501_93590501D;SPAN=315194;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:13:5:3.6:39.6,3.6,0:0:13:-39.61:39.61\n2\t93647620\t99143:2\tT\tT[2:93469219[\t26\tPASS\tDISC_MAPQ=17;EVDNC=DSCRD;IMPRECISE;MAPQ=17;MATEID=99143:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=2:93469219(-)-2:93647620(+)__2_93467501_93492501D;SPAN=178401;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:9:9:2.4:26.4,2.4,0:0:9:-26.41:26.41\n2\t93889839\t99223:2\tA\tA[2:93574645[\t39\tPASS\tDISC_MAPQ=16;EVDNC=DSCRD;IMPRECISE;MAPQ=16;MATEID=99223:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=2:93574645(-)-2:93889839(+)__2_93565501_93590501D;SPAN=315194;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:13:5:3.6:39.6,3.6,0:0:13:-39.61:39.61\n2\t94038860\t99636:1\tT\t]2:94087446]T\t29\tPASS\tDISC_MAPQ=22;EVDNC=DSCRD;IMPRECISE;MAPQ=22;MATEID=99636:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=2:94038860(-)-2:94087446(+)__2_94080001_94105001D;SPAN=48586;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:36:29.6:29.6,0,59.3:0:12:-29.49:30.1\n2\t94054277\t98519:2\tT\t]2:92743347]T\t14\tPASS\tDISC_MAPQ=15;EVDNC=DSCRD;IMPRECISE;MAPQ=15;MATEID=98519:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=2:92743347(+)-2:94054277(-)__2_92732501_92757501D;SPAN=1310930;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:42:14.6:14.6,0,90.5:0:8:-14.6:17.8\n2\t94087446\t99636:2\tC\tC[2:94038860[\t29\tPASS\tDISC_MAPQ=15;EVDNC=DSCRD;IMPRECISE;MAPQ=15;MATEID=99636:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=2:94038860(-)-2:94087446(+)__2_94080001_94105001D;SPAN=48586;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:36:29.6:29.6,0,59.3:0:12:-29.49:30.1\n2\t94089858\t99624:2\tA\t]2:93450067]A\t22\tPASS\tDISC_MAPQ=17;EVDNC=DSCRD;IMPRECISE;MAPQ=17;MATEID=99624:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=2:93450067(+)-2:94089858(-)__2_94080001_94105001D;SPAN=639791;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:13:9.5:22.7,0,9.5:0:8:-23.02:23.02\n2\t94189122\t99662:1\tC\t]20:27295507]C\t50\tPASS\tDISC_MAPQ=42;EVDNC=DSCRD;IMPRECISE;MAPQ=42;MATEID=99662:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=2:94189122(-)-20:27295507(+)__2_94178001_94203001D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:18:30:24.5:50.9,0,24.5:0:18:-51.49:51.49\n2\t94520458\t99799:1\tT\tT[2:94537151[\t61\tPASS\tDISC_MAPQ=17;EVDNC=ASDIS;HOMSEQ=ACATCACAAAGAAGTTTCTGAGAATGCTTCT;MAPQ=56;MATEID=99799:2;MATENM=0;NM=11;NUMPARTS=2;SCTG=c_2_94496501_94521501_88C;SPAN=16693;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:21:29:11.6:61.1,0,11.6:9:14:-63.06:63.06\n2\t94537151\t99799:2\tA\t]2:94520458]A\t61\tPASS\tDISC_MAPQ=255;EVDNC=ASDIS;HOMSEQ=ACATCACAAAGAAGTTTCTGAGAATGCTTCT;MAPQ=47;MATEID=99799:1;MATENM=11;NM=0;NUMPARTS=2;SCTG=c_2_94496501_94521501_88C;SPAN=16693;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:21:29:11.6:61.1,0,11.6:9:14:-63.06:63.06\n2\t95544969\t100172:1\tA\t[2:95545592[A\t87\tPASS\tDISC_MAPQ=56;EVDNC=DSCRD;IMPRECISE;MAPQ=56;MATEID=100172:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=2:95544969(-)-2:95545592(-)__2_95525501_95550501D;SPAN=623;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:31:53:44.6:87.5,0,44.6:0:31:-88.13:88.13\n2\t95545592\t100172:2\tC\t[2:95544969[C\t87\tPASS\tDISC_MAPQ=55;EVDNC=DSCRD;IMPRECISE;MAPQ=55;MATEID=100172:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=2:95544969(-)-2:95545592(-)__2_95525501_95550501D;SPAN=623;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:31:53:44.6:87.5,0,44.6:0:31:-88.13:88.13\n2\t95830277\t100286:1\tC\t]2:95957789]C\t39\tPASS\tEVDNC=ASSMB;HOMSEQ=CT;MAPQ=60;MATEID=100286:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_95942001_95967001_156C;SPAN=127512;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:15:36:39.5:39.5,0,49.4:15:0:-39.4:39.48\n2\t95957789\t100286:2\tT\tT[2:95830277[\t39\tPASS\tEVDNC=ASSMB;HOMSEQ=CT;MAPQ=60;MATEID=100286:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_95942001_95967001_156C;SPAN=127512;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:15:36:39.5:39.5,0,49.4:15:0:-39.4:39.48\n2\t95974103\t100699:1\tA\t]2:97572285]A\t25\tPASS\tDISC_MAPQ=15;EVDNC=DSCRD;IMPRECISE;MAPQ=15;MATEID=100699:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=2:95974103(-)-2:97572285(+)__2_97559001_97584001D;SPAN=1598182;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:14:9.2:25.7,0,9.2:0:9:-26.19:26.19\n2\t96816191\t100522:1\tA\t]2:96984406]A\t39\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=100522:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_96971001_96996001_45C;SPAN=168215;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:23:16.7:39.8,0,16.7:14:0:-40.18:40.18\n2\t96984406\t100522:2\tA\tA[2:96816191[\t39\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=100522:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_96971001_96996001_45C;SPAN=168215;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:23:16.7:39.8,0,16.7:14:0:-40.18:40.18\n2\t97123668\t100702:1\tT\t[2:97579760[T\t21\tPASS\tDISC_MAPQ=55;EVDNC=DSCRD;IMPRECISE;MAPQ=55;MATEID=100702:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=2:97123668(-)-2:97579760(-)__2_97559001_97584001D;SPAN=456092;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:29:21.5:21.5,0,51.2:0:9:-21.56:22.23\n2\t97194623\t100638:1\tA\t[2:97545900[A\t52\tPASS\tDISC_MAPQ=18;EVDNC=DSCRD;IMPRECISE;MAPQ=18;MATEID=100638:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=2:97194623(-)-2:97545900(-)__2_97191501_97216501D;SPAN=351277;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:18:26:12.5:52.1,0,12.5:0:18:-53.39:53.39\n2\t97204302\t100643:1\tG\tG[2:97208123[\t5\tPASS\tDISC_MAPQ=39;EVDNC=DSCRD;IMPRECISE;MAPQ=39;MATEID=100643:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=2:97204302(+)-2:97208123(-)__2_97191501_97216501D;SPAN=3821;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:75:5.3:5.3,0,183.5:0:8:-5.326:15.61\n2\t97208123\t100643:2\tA\t]2:97204302]A\t5\tPASS\tDISC_MAPQ=19;EVDNC=DSCRD;IMPRECISE;MAPQ=19;MATEID=100643:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=2:97204302(+)-2:97208123(-)__2_97191501_97216501D;SPAN=3821;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:75:5.3:5.3,0,183.5:0:8:-5.326:15.61\n2\t97545900\t100638:2\tA\t[2:97194623[A\t52\tPASS\tDISC_MAPQ=36;EVDNC=DSCRD;IMPRECISE;MAPQ=36;MATEID=100638:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=2:97194623(-)-2:97545900(-)__2_97191501_97216501D;SPAN=351277;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:18:26:12.5:52.1,0,12.5:0:18:-53.39:53.39\n2\t97572285\t100699:2\tA\tA[2:95974103[\t25\tPASS\tDISC_MAPQ=49;EVDNC=DSCRD;IMPRECISE;MAPQ=49;MATEID=100699:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=2:95974103(-)-2:97572285(+)__2_97559001_97584001D;SPAN=1598182;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:14:9.2:25.7,0,9.2:0:9:-26.19:26.19\n2\t97579760\t100702:2\tT\t[2:97123668[T\t21\tPASS\tDISC_MAPQ=49;EVDNC=DSCRD;IMPRECISE;MAPQ=49;MATEID=100702:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=2:97123668(-)-2:97579760(-)__2_97559001_97584001D;SPAN=456092;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:29:21.5:21.5,0,51.2:0:9:-21.56:22.23\n2\t98616869\t100962:1\tC\t]2:98691677]C\t24\tPASS\tEVDNC=ASSMB;INSERTION=C;MAPQ=60;MATEID=100962:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_98686001_98711001_0C;SPAN=74808;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:18:18.2:24.8,0,18.2:9:0:-24.67:24.67\n2\t98691677\t100962:2\tT\tT[2:98616869[\t24\tPASS\tEVDNC=ASSMB;INSERTION=C;MAPQ=60;MATEID=100962:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_98686001_98711001_0C;SPAN=74808;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:18:18.2:24.8,0,18.2:9:0:-24.67:24.67\n2\t101616122\t101893:1\tC\tC[2:101617126[\t69\tPASS\tEVDNC=ASSMB;HOMSEQ=ATC;MAPQ=60;MATEID=101893:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_101601501_101626501_121C;SPAN=1004;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:23:27:0.9:69.3,0.9,0:23:0:-72.66:72.66\n2\t101617126\t101893:2\tA\t]2:101616122]A\t69\tPASS\tEVDNC=ASSMB;HOMSEQ=ATC;MAPQ=60;MATEID=101893:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_101601501_101626501_121C;SPAN=1004;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:23:27:0.9:69.3,0.9,0:23:0:-72.66:72.66\n2\t102706037\t102218:1\tC\tC[2:102706360[\t58\tPASS\tEVDNC=ASSMB;HOMSEQ=AAGAATGAGTTCC;MAPQ=60;MATEID=102218:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_102704001_102729001_71C;SPAN=323;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:20:26:5.9:58.7,0,5.9:20:0:-61.11:61.11\n2\t102706360\t102218:2\tA\t]2:102706037]A\t58\tPASS\tEVDNC=ASSMB;HOMSEQ=AAGAATGAGTTCC;MAPQ=60;MATEID=102218:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_102704001_102729001_71C;SPAN=323;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:20:26:5.9:58.7,0,5.9:20:0:-61.11:61.11\n2\t104544191\t102679:1\tA\tA[2:104549876[\t35\tPASS\tEVDNC=ASSMB;HOMSEQ=A;MAPQ=60;MATEID=102679:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_104541501_104566501_111C;SPAN=5685;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:40:35:35,0,64.7:14:0:-34.97:35.49\n2\t104549876\t102679:2\tA\t]2:104544191]A\t35\tPASS\tEVDNC=ASSMB;HOMSEQ=A;MAPQ=60;MATEID=102679:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_104541501_104566501_111C;SPAN=5685;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:40:35:35,0,64.7:14:0:-34.97:35.49\n2\t106078622\t103313:1\tT\tT[2:106079439[\t38\tPASS\tEVDNC=ASSMB;HOMSEQ=T;MAPQ=60;MATEID=103313:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_106060501_106085501_2C;SPAN=817;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:27:28.7:38.6,0,28.7:14:0:-38.69:38.69\n2\t106079439\t103313:2\tT\t]2:106078622]T\t38\tPASS\tEVDNC=ASSMB;HOMSEQ=T;MAPQ=60;MATEID=103313:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_106060501_106085501_2C;SPAN=817;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:27:28.7:38.6,0,28.7:14:0:-38.69:38.69\n2\t108694098\t104171:1\tC\tC[2:108695654[\t50\tPASS\tEVDNC=ASSMB;HOMSEQ=C;MAPQ=60;MATEID=104171:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_108682001_108707001_109C;SPAN=1556;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:17:22:3.8:50,0,3.8:17:0:-52.01:52.01\n2\t108695654\t104171:2\tC\t]2:108694098]C\t50\tPASS\tEVDNC=ASSMB;HOMSEQ=C;MAPQ=60;MATEID=104171:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_108682001_108707001_109C;SPAN=1556;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:17:22:3.8:50,0,3.8:17:0:-52.01:52.01\n2\t110818831\t104698:1\tT\tT[2:110819060[\t40\tPASS\tEVDNC=ASSMB;HOMSEQ=TGAT;MAPQ=60;MATEID=104698:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_110813501_110838501_12C;SPAN=229;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:15:34:40.1:40.1,0,43.4:15:0:-39.96:39.98\n2\t110819060\t104698:2\tT\t]2:110818831]T\t40\tPASS\tEVDNC=ASSMB;HOMSEQ=TGAT;MAPQ=60;MATEID=104698:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_110813501_110838501_12C;SPAN=229;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:15:34:40.1:40.1,0,43.4:15:0:-39.96:39.98\n2\t112957280\t105463:1\tT\t]2:113032263]T\t25\tPASS\tEVDNC=ASSMB;HOMSEQ=TC;MAPQ=60;MATEID=105463:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_113018501_113043501_75C;SPAN=74983;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:26:25.7:25.7,0,38.9:10:0:-25.7:25.87\n2\t113032263\t105463:2\tC\tC[2:112957280[\t25\tPASS\tEVDNC=ASSMB;HOMSEQ=TC;MAPQ=60;MATEID=105463:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_113018501_113043501_75C;SPAN=74983;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:26:25.7:25.7,0,38.9:10:0:-25.7:25.87\n2\t113393765\t105599:1\tG\tG[2:113396035[\t99\tPASS\tDISC_MAPQ=42;EVDNC=ASDIS;HOMSEQ=AAAAACAGTATTGCTG;MAPQ=60;MATEID=105599:2;MATENM=0;NM=9;NUMPARTS=2;SCTG=c_2_113386001_113411001_46C;SPAN=2270;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:115:7:32.1:353.1,32.1,0:94:22:-353.2:353.2\n2\t113396035\t105599:2\tA\t]2:113393765]A\t99\tPASS\tDISC_MAPQ=30;EVDNC=ASDIS;HOMSEQ=AAAAACAGTATTGCTG;MAPQ=60;MATEID=105599:1;MATENM=9;NM=0;NUMPARTS=2;SCTG=c_2_113386001_113411001_46C;SPAN=2270;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:115:7:32.1:353.1,32.1,0:94:22:-353.2:353.2\n2\t114785557\t106020:1\tT\tT[2:114785773[\t28\tPASS\tEVDNC=ASSMB;INSERTION=GTTTGTTGTTCAGAATTTATTGTACTTTATT;MAPQ=60;MATEID=106020:2;MATENM=2;NM=1;NUMPARTS=2;SCTG=c_2_114782501_114807501_13C;SPAN=216;SUBN=1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:40:28.4:28.4,0,71.3:12:0:-28.37:29.43\n2\t114785773\t106020:2\tA\t]2:114785557]A\t28\tPASS\tEVDNC=ASSMB;INSERTION=GTTTGTTGTTCAGAATTTATTGTACTTTATT;MAPQ=60;MATEID=106020:1;MATENM=1;NM=2;NUMPARTS=2;SCTG=c_2_114782501_114807501_13C;SPAN=216;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:40:28.4:28.4,0,71.3:12:0:-28.37:29.43\n2\t115619092\t517334:1\tG\t]9:128694869]G\t27\tPASS\tEVDNC=ASSMB;HOMSEQ=GTCTCT;MAPQ=60;MATEID=517334:2;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_9_128674001_128699001_56C;SPAN=-1;SUBN=1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:32:27.5:27.5,0,50.6:11:0:-27.32:27.77\n2\t115619217\t517337:1\tA\tA]9:128696493]\t48\tPASS\tDISC_MAPQ=56;EVDNC=DSCRD;IMPRECISE;MAPQ=56;MATEID=517337:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=2:115619217(+)-9:128696493(+)__9_128674001_128699001D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:17:28:21.8:48.2,0,21.8:0:17:-48.77:48.77\n2\t115904500\t106447:1\tG\tG[2:115905081[\t65\tPASS\tEVDNC=ASSMB;INSERTION=G;MAPQ=60;MATEID=106447:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_115885001_115910001_118C;SPAN=581;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:23:38:29:65.3,0,29:23:0:-65.93:65.93\n2\t115905081\t106447:2\tA\t]2:115904500]A\t65\tPASS\tEVDNC=ASSMB;INSERTION=G;MAPQ=60;MATEID=106447:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_115885001_115910001_118C;SPAN=581;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:23:38:29:65.3,0,29:23:0:-65.93:65.93\n2\t116216764\t106565:1\tC\t[2:116224311[C\t53\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;INSERTION=AGT;MAPQ=60;MATEID=106565:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_2_116203501_116228501_71C;SPAN=7547;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:20:43:53.9:53.9,0,53.9:10:11:-53.93:53.93\n2\t116217058\t106566:1\tT\tT[2:116220728[\t42\tPASS\tEVDNC=ASSMB;HOMSEQ=T;MAPQ=60;MATEID=106566:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_116203501_116228501_42C;SPAN=3670;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:17:48:42.8:42.8,0,75.8:17:0:-42.62:43.2\n2\t116220728\t106566:2\tT\t]2:116217058]T\t42\tPASS\tEVDNC=ASSMB;HOMSEQ=T;MAPQ=60;MATEID=106566:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_116203501_116228501_42C;SPAN=3670;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:17:48:42.8:42.8,0,75.8:17:0:-42.62:43.2\n2\t116224311\t106565:2\tT\t[2:116216764[T\t53\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;INSERTION=AGT;MAPQ=60;MATEID=106565:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_2_116203501_116228501_71C;SPAN=7547;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:20:43:53.9:53.9,0,53.9:10:11:-53.93:53.93\n2\t117135487\t106904:1\tC\tC[2:117135814[\t30\tPASS\tEVDNC=ASSMB;HOMSEQ=AAGAAATACATCC;MAPQ=60;MATEID=106904:2;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_2_117134501_117159501_18C;SPAN=327;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:28:222:30.1:30.1,0,528.5:28:0:-30.03:56.82\n2\t117135814\t106904:2\tA\t]2:117135487]A\t30\tPASS\tEVDNC=ASSMB;HOMSEQ=AAGAAATACATCC;MAPQ=60;MATEID=106904:1;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_2_117134501_117159501_18C;SPAN=327;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:28:222:30.1:30.1,0,528.5:28:0:-30.03:56.82\n2\t117262101\t106966:1\tC\tC[2:117263734[\t22\tPASS\tEVDNC=ASSMB;HOMSEQ=C;MAPQ=60;MATEID=106966:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_2_117257001_117282001_22C;SPAN=1633;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:38:22.4:22.4,0,71.9:10:0:-22.33:23.85\n2\t117263734\t106966:2\tC\t]2:117262101]C\t22\tPASS\tEVDNC=ASSMB;HOMSEQ=C;MAPQ=60;MATEID=106966:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_2_117257001_117282001_22C;SPAN=1633;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:38:22.4:22.4,0,71.9:10:0:-22.33:23.85\n2\t117291982\t106977:1\tA\tA[2:117294929[\t17\tPASS\tEVDNC=ASSMB;HOMSEQ=AA;MAPQ=60;MATEID=106977:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_117281501_117306501_19C;SPAN=2947;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:34:17:17,0,66.5:8:0:-16.85:18.63\n2\t117294929\t106977:2\tA\t]2:117291982]A\t17\tPASS\tEVDNC=ASSMB;HOMSEQ=AA;MAPQ=60;MATEID=106977:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_117281501_117306501_19C;SPAN=2947;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:34:17:17,0,66.5:8:0:-16.85:18.63\n2\t117466294\t107039:1\tA\tA[2:117469493[\t68\tPASS\tEVDNC=ASSMB;HOMSEQ=CACA;MAPQ=60;MATEID=107039:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_117453001_117478001_40C;SPAN=3199;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:23:28:2:68,0,2:23:0:-71.75:71.75\n2\t117469493\t107039:2\tC\t]2:117466294]C\t68\tPASS\tEVDNC=ASSMB;HOMSEQ=CACA;MAPQ=60;MATEID=107039:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_117453001_117478001_40C;SPAN=3199;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:23:28:2:68,0,2:23:0:-71.75:71.75\n2\t118895753\t107559:1\tT\tT[2:118901793[\t46\tPASS\tEVDNC=ASSMB;HOMSEQ=CGGCACTGGCTT;MAPQ=60;MATEID=107559:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_118898501_118923501_3C;SPAN=6040;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:16:14:4.2:46.2,4.2,0:16:0:-46.21:46.21\n2\t118901793\t107559:2\tC\t]2:118895753]C\t46\tPASS\tEVDNC=ASSMB;HOMSEQ=CGGCACTGGCTT;MAPQ=60;MATEID=107559:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_118898501_118923501_3C;SPAN=6040;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:16:14:4.2:46.2,4.2,0:16:0:-46.21:46.21\n2\t119525207\t107732:1\tG\t]2:119525569]G\t26\tPASS\tEVDNC=ASSMB;HOMSEQ=G;MAPQ=60;MATEID=107732:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_119511001_119536001_108C;SPAN=362;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:48:26.3:26.3,0,92.3:12:0:-26.12:28.31\n2\t119525569\t107732:2\tG\tG[2:119525207[\t26\tPASS\tEVDNC=ASSMB;HOMSEQ=G;MAPQ=60;MATEID=107732:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_119511001_119536001_108C;SPAN=362;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:48:26.3:26.3,0,92.3:12:0:-26.12:28.31\n2\t119659504\t107766:1\tC\t]2:119660912]C\t78\tPASS\tDISC_MAPQ=58;EVDNC=ASDIS;INSERTION=GGC;MAPQ=60;MATEID=107766:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_119658001_119683001_112C;SPAN=1408;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:28:49:42.5:78.8,0,42.5:23:16:-79.16:79.16\n2\t119659624\t107767:1\tC\tC[2:119660920[\t39\tPASS\tEVDNC=ASSMB;HOMSEQ=GCC;MAPQ=60;MATEID=107767:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_2_119658001_119683001_83C;SPAN=1296;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:16:47:39.8:39.8,0,76.1:16:0:-39.61:40.32\n2\t119660912\t107766:2\tC\tC[2:119659504[\t78\tPASS\tDISC_MAPQ=57;EVDNC=ASDIS;INSERTION=GGC;MAPQ=60;MATEID=107766:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_119658001_119683001_112C;SPAN=1408;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:28:49:42.5:78.8,0,42.5:23:16:-79.16:79.16\n2\t119660920\t107767:2\tG\t]2:119659624]G\t39\tPASS\tEVDNC=ASSMB;HOMSEQ=GCC;MAPQ=60;MATEID=107767:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_2_119658001_119683001_83C;SPAN=1296;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:16:47:39.8:39.8,0,76.1:16:0:-39.61:40.32\n2\t120540055\t108111:1\tT\t]2:120753069]T\t34\tPASS\tEVDNC=ASSMB;INSERTION=ATAAGGGTCA;MAPQ=60;MATEID=108111:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_120736001_120761001_31C;SPAN=213014;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:19:11.3:34.4,0,11.3:12:0:-34.76:34.76\n2\t120753069\t108111:2\tT\tT[2:120540055[\t34\tPASS\tEVDNC=ASSMB;INSERTION=ATAAGGGTCA;MAPQ=60;MATEID=108111:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_120736001_120761001_31C;SPAN=213014;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:19:11.3:34.4,0,11.3:12:0:-34.76:34.76\n2\t121040233\t108217:1\tG\tG[2:121040824[\t24\tPASS\tEVDNC=ASSMB;HOMSEQ=CAGG;MAPQ=60;MATEID=108217:2;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_2_121030001_121055001_47C;SPAN=591;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:20:24.2:24.2,0,24.2:9:0:-24.09:24.09\n2\t121040824\t108217:2\tC\t]2:121040233]C\t24\tPASS\tEVDNC=ASSMB;HOMSEQ=CAGG;MAPQ=60;MATEID=108217:1;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_2_121030001_121055001_47C;SPAN=591;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:20:24.2:24.2,0,24.2:9:0:-24.09:24.09\n2\t122607302\t108621:1\tA\tA[2:122607801[\t82\tPASS\tEVDNC=ASSMB;INSERTION=ATGGCAAATTAAATCCACCCAAGTCTATCA;MAPQ=60;MATEID=108621:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_122598001_122623001_135C;SPAN=499;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:26:29:4.8:82.5,4.8,0:26:0:-83.85:83.85\n2\t122607801\t108621:2\tA\t]2:122607302]A\t82\tPASS\tEVDNC=ASSMB;INSERTION=ATGGCAAATTAAATCCACCCAAGTCTATCA;MAPQ=60;MATEID=108621:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_122598001_122623001_135C;SPAN=499;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:26:29:4.8:82.5,4.8,0:26:0:-83.85:83.85\n2\t122612412\t108622:1\tA\t]2:122613125]A\t35\tPASS\tDISC_MAPQ=58;EVDNC=DSCRD;IMPRECISE;MAPQ=58;MATEID=108622:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=2:122612412(-)-2:122613125(+)__2_122598001_122623001D;SPAN=713;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:39:35.3:35.3,0,61.7:0:14:-35.25:35.68\n2\t122612418\t108624:1\tG\tG[2:122612766[\t44\tPASS\tEVDNC=ASSMB;HOMSEQ=TGG;MAPQ=60;MATEID=108624:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_122598001_122623001_26C;SPAN=348;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:16:31:31.1:44.3,0,31.1:16:0:-44.17:44.17\n2\t122612766\t108624:2\tT\t]2:122612418]T\t44\tPASS\tEVDNC=ASSMB;HOMSEQ=TGG;MAPQ=60;MATEID=108624:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_122598001_122623001_26C;SPAN=348;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:16:31:31.1:44.3,0,31.1:16:0:-44.17:44.17\n2\t122613125\t108622:2\tA\tA[2:122612412[\t35\tPASS\tDISC_MAPQ=58;EVDNC=DSCRD;IMPRECISE;MAPQ=58;MATEID=108622:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=2:122612412(-)-2:122613125(+)__2_122598001_122623001D;SPAN=713;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:39:35.3:35.3,0,61.7:0:14:-35.25:35.68\n2\t122719026\t108679:1\tG\t[2:122724930[G\t62\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=GA;MAPQ=60;MATEID=108679:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_122720501_122745501_3C;SPAN=5904;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:21:19:5.7:62.7,5.7,0:12:16:-62.72:62.72\n2\t122724930\t108679:2\tT\t[2:122719026[T\t62\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=GA;MAPQ=60;MATEID=108679:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_122720501_122745501_3C;SPAN=5904;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:21:19:5.7:62.7,5.7,0:12:16:-62.72:62.72\n2\t124294183\t109318:1\tT\t[2:124295338[T\t99\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;INSERTION=GTAGG;MAPQ=60;MATEID=109318:2;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_2_124288501_124313501_27C;SPAN=1155;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:45:45:12.6:138.6,12.6,0:32:18:-138.6:138.6\n2\t124295338\t109318:2\tC\t[2:124294183[C\t99\tPASS\tDISC_MAPQ=56;EVDNC=ASDIS;INSERTION=GTAGG;MAPQ=60;MATEID=109318:1;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_2_124288501_124313501_27C;SPAN=1155;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:45:45:12.6:138.6,12.6,0:32:18:-138.6:138.6\n2\t125008984\t109599:1\tC\tC[2:125010671[\t99\tPASS\tEVDNC=ASSMB;HOMSEQ=C;MAPQ=60;MATEID=109599:2;MATENM=0;NM=8;NUMPARTS=2;SCTG=c_2_124999001_125024001_30C;SPAN=1687;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:38:50:12.5:111.5,0,12.5:38:0:-115.7:115.7\n2\t125008985\t109602:1\tA\t]2:125010824]A\t99\tPASS\tEVDNC=ASSMB;INSERTION=TCTATACTCACTACTACACTAT;MAPQ=60;MATEID=109602:2;MATENM=0;NM=5;NUMPARTS=2;SCTG=c_2_124999001_125024001_27C;SPAN=1839;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:50:36:13.8:151.8,13.8,0:50:0:-151.8:151.8\n2\t125010671\t109599:2\tC\t]2:125008984]C\t99\tPASS\tEVDNC=ASSMB;HOMSEQ=C;MAPQ=60;MATEID=109599:1;MATENM=8;NM=0;NUMPARTS=2;SCTG=c_2_124999001_125024001_30C;SPAN=1687;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:38:50:12.5:111.5,0,12.5:38:0:-115.7:115.7\n2\t125010824\t109602:2\tC\tC[2:125008985[\t99\tPASS\tEVDNC=ASSMB;INSERTION=TCTATACTCACTACTACACTAT;MAPQ=60;MATEID=109602:1;MATENM=5;NM=0;NUMPARTS=2;SCTG=c_2_124999001_125024001_27C;SPAN=1839;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:50:36:13.8:151.8,13.8,0:50:0:-151.8:151.8\n2\t125013432\t471947:1\tA\t[8:117667362[A\t92\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;INSERTION=AAATAAAAT;MAPQ=60;MATEID=471947:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_117649001_117674001_5C;SPAN=-1;SUBN=1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:31:26:8.4:92.4,8.4,0:27:7:-92.42:92.42\n2\t125276952\t109688:1\tA\t]2:125284312]A\t24\tPASS\tDISC_MAPQ=32;EVDNC=ASDIS;MAPQ=60;MATEID=109688:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_2_125268501_125293501_20C;SPAN=7360;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:42:24.5:24.5,0,80.6:9:7:-24.51:26.21\n2\t125284312\t109688:2\tT\tT[2:125276952[\t24\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;MAPQ=60;MATEID=109688:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_2_125268501_125293501_20C;SPAN=7360;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:42:24.5:24.5,0,80.6:9:7:-24.51:26.21\n2\t125685674\t109860:1\tC\tC[2:125694255[\t99\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TAAC;MAPQ=60;MATEID=109860:2;MATENM=2;NM=1;NUMPARTS=2;SCTG=c_2_125660501_125685501_31C;SPAN=8581;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:42:0:11.7:128.7,11.7,0:30:17:-128.7:128.7\n2\t125694255\t109860:2\tT\t]2:125685674]T\t99\tPASS\tDISC_MAPQ=59;EVDNC=ASDIS;HOMSEQ=TAAC;MAPQ=60;MATEID=109860:1;MATENM=1;NM=2;NUMPARTS=2;SCTG=c_2_125660501_125685501_31C;SPAN=8581;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:42:0:11.7:128.7,11.7,0:30:17:-128.7:128.7\n2\t125852537\t109909:1\tG\tG[2:125866487[\t28\tPASS\tEVDNC=ASSMB;HOMSEQ=TTG;MAPQ=60;MATEID=109909:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_125856501_125881501_11C;SPAN=13950;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:16:8.9:28.7,0,8.9:10:0:-28.89:28.89\n2\t125866487\t109909:2\tT\t]2:125852537]T\t28\tPASS\tEVDNC=ASSMB;HOMSEQ=TTG;MAPQ=60;MATEID=109909:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_125856501_125881501_11C;SPAN=13950;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:16:8.9:28.7,0,8.9:10:0:-28.89:28.89\n2\t126315750\t989664:1\tG\t]Un_KN707841v1_decoy:8992]G\t33\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=989664:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_692_1_8992_0C;SPAN=-1;SUBN=6;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:11:3:3:33,3,0:11:0:-33.01:33.01\n2\t126315751\t110043:1\tT\tT[Un_KN707841v1_decoy:1[\t46\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=110043:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_126297501_126322501_42C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:16:23:10.1:46.4,0,10.1:16:0:-47.52:47.52\n2\t126917182\t110225:1\tC\tC[2:126919697[\t51\tPASS\tEVDNC=ASSMB;HOMSEQ=TC;MAPQ=60;MATEID=110225:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_2_126910001_126935001_60C;SPAN=2515;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:18:27:15.5:51.8,0,15.5:18:0:-52.86:52.86\n2\t126919697\t110225:2\tT\t]2:126917182]T\t51\tPASS\tEVDNC=ASSMB;HOMSEQ=TC;MAPQ=60;MATEID=110225:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_2_126910001_126935001_60C;SPAN=2515;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:18:27:15.5:51.8,0,15.5:18:0:-52.86:52.86\n2\t127188819\t110351:1\tA\t]2:127316157]A\t56\tPASS\tDISC_MAPQ=59;EVDNC=DSCRD;IMPRECISE;MAPQ=59;MATEID=110351:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=2:127188819(-)-2:127316157(+)__2_127302001_127327001D;SPAN=127338;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:18:21:2.4:56.1,2.4,0:0:18:-57:57\n2\t127316157\t110351:2\tT\tT[2:127188819[\t56\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=110351:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=2:127188819(-)-2:127316157(+)__2_127302001_127327001D;SPAN=127338;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:18:21:2.4:56.1,2.4,0:0:18:-57:57\n2\t128082406\t110651:1\tC\tC[3:185432358[\t66\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TTTTTGTGTTTTTAGTAGAGACAGGGTTTCAC;MAPQ=60;MATEID=110651:2;MATENM=2;NM=6;NUMPARTS=2;SCTG=c_2_128061501_128086501_81C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:22:13:6:66,6,0:18:9:-66.02:66.02\n2\t128792240\t110897:1\tC\t]2:128792506]C\t9\tPASS\tDISC_MAPQ=22;EVDNC=ASDIS;HOMSEQ=CACAGTGTCTCACACACACATCCACACA;MAPQ=60;MATEID=110897:2;MATENM=7;NM=2;NUMPARTS=2;SCTG=c_2_128772001_128797001_8C;SPAN=266;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:7:48:9.8:9.8,0,108.8:5:2:-9.615:14.68\n2\t128792369\t110900:1\tC\tC[2:128792446[\t18\tPASS\tEVDNC=ASSMB;INSERTION=GCACAGTGTCTCA;MAPQ=33;MATEID=110900:2;MATENM=7;NM=2;NUMPARTS=2;SCTG=c_2_128772001_128797001_44C;SPAN=77;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:51:18.8:18.8,0,107.9:10:0:-18.67:22.39\n2\t128792402\t110902:1\tA\tA[2:128792446[\t6\tPASS\tDISC_MAPQ=255;EVDNC=TSI_L;HOMSEQ=CACACACATGCACACACA;MAPQ=45;MATEID=110902:2;MATENM=7;NM=5;NUMPARTS=3;REPSEQ=ACACACAC;SCTG=c_2_128772001_128797001_60C;SPAN=44;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:51:6:6,0,59.8:10:0:-5.664:9.489\n2\t128792446\t110900:2\tC\t]2:128792369]C\t18\tPASS\tEVDNC=ASSMB;INSERTION=GCACAGTGTCTCA;MAPQ=60;MATEID=110900:1;MATENM=2;NM=7;NUMPARTS=2;SCTG=c_2_128772001_128797001_44C;SPAN=77;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:51:18.8:18.8,0,107.9:10:0:-18.67:22.39\n2\t128792446\t110902:2\tC\t]2:128792402]C\t6\tPASS\tDISC_MAPQ=255;EVDNC=TSI_L;HOMSEQ=CACACACATGCACACACA;MAPQ=60;MATEID=110902:1;MATENM=5;NM=7;NUMPARTS=3;REPSEQ=ACACACAC;SCTG=c_2_128772001_128797001_60C;SPAN=44;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:51:6:6,0,59.8:10:0:-5.664:9.489\n2\t128792446\t110905:1\tC\t]2:128792506]C\t53\tPASS\tDISC_MAPQ=255;EVDNC=TSI_G;HOMSEQ=CACACACATGCACACACA;INSERTION=CAGTGTCTCTCACAAAGACCTCTCACACACACACATCCACACACATGCACAGTGTCACACACATCTCACACACGCACACAGTGTCA;MAPQ=60;MATEID=110905:2;MATENM=3;NM=7;NUMPARTS=3;SCTG=c_2_128772001_128797001_60C;SPAN=60;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:20:45:53.3:53.3,0,59.9:20:0:-53.37:53.39\n2\t128792506\t110897:2\tA\tA[2:128792240[\t9\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=CACAGTGTCTCACACACACATCCACACA;MAPQ=60;MATEID=110897:1;MATENM=2;NM=7;NUMPARTS=2;SCTG=c_2_128772001_128797001_8C;SPAN=266;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:7:48:9.8:9.8,0,108.8:5:2:-9.615:14.68\n2\t128792506\t110905:2\tA\tA[2:128792446[\t53\tPASS\tDISC_MAPQ=255;EVDNC=TSI_G;HOMSEQ=CACACACATGCACACACA;INSERTION=CAGTGTCTCTCACAAAGACCTCTCACACACACACATCCACACACATGCACAGTGTCACACACATCTCACACACGCACACAGTGTCA;MAPQ=60;MATEID=110905:1;MATENM=7;NM=3;NUMPARTS=3;SCTG=c_2_128772001_128797001_60C;SPAN=60;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:20:45:53.3:53.3,0,59.9:20:0:-53.37:53.39\n2\t1289275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2\t875478:1\tG\tG[20:30502676[\t59\tPASS\tDISC_MAPQ=49;EVDNC=DSCRD;IMPRECISE;MAPQ=49;MATEID=875478:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=2:132270852(+)-20:30502676(-)__20_30502501_30527501D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:18:20:5.4:59.4,5.4,0:0:18:-58.15:58.15\n2\t132544930\t112605:1\tC\t]2:132883250]C\t15\tPASS\tDISC_MAPQ=58;EVDNC=ASDIS;HOMSEQ=CATG;MAPQ=60;MATEID=112605:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_132863501_132888501_16C;SPAN=338320;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:6:17:15.2:15.2,0,25.1:4:4:-15.03:15.24\n2\t132883250\t112605:2\tG\tG[2:132544930[\t15\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=CATG;MAPQ=60;MATEID=112605:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_132863501_132888501_16C;SPAN=338320;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:6:17:15.2:15.2,0,25.1:4:4:-15.03:15.24\n2\t133005391\t112633:1\tC\tC[2:133006981[\t20\tPASS\tEVDNC=ASSMB;INSERTION=AAACAACAAAAAATTATT;MAPQ=60;MATEID=112633:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_132986001_133011001_15C;SPAN=1590;SUBN=2;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:33:20.6:20.6,0,60.2:9:0:-20.43:21.63\n2\t133006981\t112633:2\tT\t]2:133005391]T\t20\tPASS\tEVDNC=ASSMB;INSERTION=AAACAACAAAAAATTATT;MAPQ=60;MATEID=112633:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_132986001_133011001_15C;SPAN=1590;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:33:20.6:20.6,0,60.2:9:0:-20.43:21.63\n2\t133212138\t112700:1\tG\t]2:133287509]G\t19\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=GA;MAPQ=60;MATEID=112700:2;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_2_133280001_133305001_15C;SPAN=75371;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:25:19.4:19.4,0,42.5:7:2:-19.38:19.89\n2\t133287509\t112700:2\tA\tA[2:133212138[\t19\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=GA;MAPQ=60;MATEID=112700:1;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_2_133280001_133305001_15C;SPAN=75371;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:25:19.4:19.4,0,42.5:7:2:-19.38:19.89\n2\t133702708\t112810:1\tT\tT[2:133703001[\t95\tPASS\tEVDNC=ASSMB;HOMSEQ=CTCGTCTCTTTTTCT;MAPQ=60;MATEID=112810:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_2_133696501_133721501_7C;SPAN=293;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:32:18:8.7:95.7,8.7,0:32:0:-95.72:95.72\n2\t133703001\t112810:2\tC\t]2:133702708]C\t95\tPASS\tEVDNC=ASSMB;HOMSEQ=CTCGTCTCTTTTTCT;MAPQ=60;MATEID=112810:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_2_133696501_133721501_7C;SPAN=293;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:32:18:8.7:95.7,8.7,0:32:0:-95.72:95.72\n2\t133786720\t112839:1\tA\tA[2:133787036[\t37\tPASS\tEVDNC=ASSMB;HOMSEQ=AAATAATTGATGATTTA;MAPQ=60;MATEID=112839:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_133770001_133795001_54C;SPAN=316;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:16:55:37.4:37.4,0,100.1:16:0:-37.36:38.98\n2\t133787036\t112839:2\tA\t]2:133786720]A\t37\tPASS\tEVDNC=ASSMB;HOMSEQ=AAATAATTGATGATTTA;MAPQ=60;MATEID=112839:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_133770001_133795001_54C;SPAN=316;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:16:55:37.4:37.4,0,100.1:16:0:-37.36:38.98\n2\t134209146\t112961:1\tT\tT[2:134212560[\t29\tPASS\tEVDNC=ASSMB;HOMSEQ=AGAACTGGCTTATTTTT;MAPQ=60;MATEID=112961:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_134211001_134236001_46C;SPAN=3414;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:9:10:2.7:29.7,2.7,0:9:0:-29.08:29.08\n2\t134212560\t112961:2\tA\t]2:134209146]A\t29\tPASS\tEVDNC=ASSMB;HOMSEQ=AGAACTGGCTTATTTTT;MAPQ=60;MATEID=112961:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_134211001_134236001_46C;SPAN=3414;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:9:10:2.7:29.7,2.7,0:9:0:-29.08:29.08\n2\t134524328\t113044:1\tG\tG[2:134525016[\t53\tPASS\tEVDNC=ASSMB;HOMSEQ=G;MAPQ=60;MATEID=113044:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_134505001_134530001_4C;SPAN=688;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:19:34:30.2:53.3,0,30.2:19:0:-53.43:53.43\n2\t134525016\t113044:2\tG\t]2:134524328]G\t53\tPASS\tEVDNC=ASSMB;HOMSEQ=G;MAPQ=60;MATEID=113044:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_134505001_134530001_4C;SPAN=688;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:19:34:30.2:53.3,0,30.2:19:0:-53.43:53.43\n2\t134921604\t113147:1\tT\tT[2:134923614[\t13\tPASS\tEVDNC=ASSMB;HOMSEQ=GCCT;MAPQ=60;MATEID=113147:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_134921501_134946501_50C;SPAN=2010;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:46:13.7:13.7,0,99.5:8:0:-13.48:17.45\n2\t134923614\t113147:2\tG\t]2:134921604]G\t13\tPASS\tEVDNC=ASSMB;HOMSEQ=GCCT;MAPQ=60;MATEID=113147:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_134921501_134946501_50C;SPAN=2010;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:46:13.7:13.7,0,99.5:8:0:-13.48:17.45\n2\t137225736\t113732:1\tT\tT[2:137226890[\t48\tPASS\tEVDNC=ASSMB;HOMSEQ=AT;MAPQ=60;MATEID=113732:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_137224501_137249501_17C;SPAN=1154;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:17:27:18.8:48.5,0,18.8:17:0:-49.21:49.21\n2\t137226890\t113732:2\tA\t]2:137225736]A\t48\tPASS\tEVDNC=ASSMB;HOMSEQ=AT;MAPQ=60;MATEID=113732:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_137224501_137249501_17C;SPAN=1154;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:17:27:18.8:48.5,0,18.8:17:0:-49.21:49.21\n2\t138199265\t114138:1\tA\t]2:138199333]A\t33\tPASS\tEVDNC=ASSMB;HOMSEQ=A;MAPQ=60;MATEID=114138:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_138180001_138205001_40C;SPAN=68;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:35:33.2:33.2,0,53:13:0:-33.08:33.38\n2\t138199333\t114138:2\tA\tA[2:138199265[\t33\tPASS\tEVDNC=ASSMB;HOMSEQ=A;MAPQ=60;MATEID=114138:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_138180001_138205001_40C;SPAN=68;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:35:33.2:33.2,0,53:13:0:-33.08:33.38\n2\t140883094\t115249:1\tC\t]2:140942060]C\t46\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;INSERTION=ATAGAAT;MAPQ=60;MATEID=115249:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_140924001_140949001_4C;SPAN=58966;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:15:18:1.5:46.2,1.5,0:8:12:-47.02:47.02\n2\t140942060\t115249:2\tA\tA[2:140883094[\t46\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;INSERTION=ATAGAAT;MAPQ=60;MATEID=115249:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_140924001_140949001_4C;SPAN=58966;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:15:18:1.5:46.2,1.5,0:8:12:-47.02:47.02\n2\t141095450\t115326:2\tA\tA]1:118858672]\t42\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=115326:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:118858672(+)-2:141095450(+)__2_141071001_141096001D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:14:12:3.9:42.9,3.9,0:0:14:-42.91:42.91\n2\t141141086\t115406:1\tT\tT[2:141224396[\t39\tPASS\tEVDNC=ASSMB;HOMSEQ=AGTT;MAPQ=60;MATEID=115406:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_2_141218001_141243001_34C;SPAN=83310;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:13:13:3.6:39.6,3.6,0:13:0:-39.61:39.61\n2\t141211129\t115452:1\tA\tA[2:141354574[\t22\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=A;MAPQ=60;MATEID=115452:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_2_141340501_141365501_3C;SPAN=143445;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:16:15.5:22.1,0,15.5:5:4:-21.93:21.93\n2\t141224396\t115406:2\tA\t]2:141141086]A\t39\tPASS\tEVDNC=ASSMB;HOMSEQ=AGTT;MAPQ=60;MATEID=115406:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_2_141218001_141243001_34C;SPAN=83310;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:13:13:3.6:39.6,3.6,0:13:0:-39.61:39.61\n2\t141354574\t115452:2\tA\t]2:141211129]A\t22\tPASS\tDISC_MAPQ=57;EVDNC=ASDIS;HOMSEQ=A;MAPQ=60;MATEID=115452:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_2_141340501_141365501_3C;SPAN=143445;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:16:15.5:22.1,0,15.5:5:4:-21.93:21.93\n2\t142677053\t115964:1\tT\tT[2:142677375[\t48\tPASS\tEVDNC=ASSMB;HOMSEQ=CAAAGCTTTCATTTTTT;MAPQ=60;MATEID=115964:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_2_142663501_142688501_29C;SPAN=322;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:20:62:48.8:48.8,0,104.9:20:0:-48.59:49.82\n2\t142677375\t115964:2\tC\t]2:142677053]C\t48\tPASS\tEVDNC=ASSMB;HOMSEQ=CAAAGCTTTCATTTTTT;MAPQ=60;MATEID=115964:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_2_142663501_142688501_29C;SPAN=322;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:20:62:48.8:48.8,0,104.9:20:0:-48.59:49.82\n2\t143253785\t835731:1\tA\tA]18:71950157]\t36\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=835731:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=2:143253785(+)-18:71950157(+)__18_71932001_71957001D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:12:6:3.3:36.3,3.3,0:0:12:-36.31:36.31\n2\t144160369\t116411:1\tA\t]2:144160541]A\t19\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=116411:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_144158001_144183001_13C;SPAN=172;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:38:19.1:19.1,0,75.2:9:0:-19.03:20.99\n2\t144160541\t116411:2\tC\tC[2:144160369[\t19\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=116411:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_144158001_144183001_13C;SPAN=172;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:38:19.1:19.1,0,75.2:9:0:-19.03:20.99\n2\t144833448\t116606:1\tT\tT[2:144835123[\t17\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=116606:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=2:144833448(+)-2:144835123(-)__2_144819501_144844501D;SPAN=1675;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:34:17:17,0,66.5:0:8:-16.85:18.63\n2\t144835123\t116606:2\tG\t]2:144833448]G\t17\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=116606:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=2:144833448(+)-2:144835123(-)__2_144819501_144844501D;SPAN=1675;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:34:17:17,0,66.5:0:8:-16.85:18.63\n2\t145668177\t116850:1\tA\t]2:145716276]A\t33\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;MAPQ=60;MATEID=116850:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_2_145701501_145726501_17C;SPAN=48099;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:23:23.3:33.2,0,23.3:10:9:-33.21:33.21\n2\t145716276\t116850:2\tT\tT[2:145668177[\t33\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;MAPQ=60;MATEID=116850:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_2_145701501_145726501_17C;SPAN=48099;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:23:23.3:33.2,0,23.3:10:9:-33.21:33.21\n2\t146105053\t117026:1\tT\tT[2:146119295[\t35\tPASS\tEVDNC=ASSMB;HOMSEQ=GT;MAPQ=60;MATEID=117026:2;MATENM=3;NM=0;NUMPARTS=2;SCTG=c_2_146118001_146143001_26C;SPAN=14242;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:16:2.3:35.3,0,2.3:12:0:-36.39:36.39\n2\t146119295\t117026:2\tG\t]2:146105053]G\t35\tPASS\tEVDNC=ASSMB;HOMSEQ=GT;MAPQ=60;MATEID=117026:1;MATENM=0;NM=3;NUMPARTS=2;SCTG=c_2_146118001_146143001_26C;SPAN=14242;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:16:2.3:35.3,0,2.3:12:0:-36.39:36.39\n2\t148379770\t117653:1\tA\t]2:148427543]A\t31\tPASS\tDISC_MAPQ=48;EVDNC=ASDIS;INSERTION=T;MAPQ=60;MATEID=117653:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_148372001_148397001_19C;SPAN=47773;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:28:31.7:31.7,0,38.3:11:8:-31.74:31.78\n2\t148427543\t117653:2\tA\tA[2:148379770[\t31\tPASS\tDISC_MAPQ=36;EVDNC=ASDIS;INSERTION=T;MAPQ=47;MATEID=117653:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_148372001_148397001_19C;SPAN=47773;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:28:31.7:31.7,0,38.3:11:8:-31.74:31.78\n2\t150174624\t118294:1\tT\tT[2:150181733[\t99\tPASS\tEVDNC=ASSMB;INSERTION=T;MAPQ=60;MATEID=118294:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_150160501_150185501_19C;SPAN=7109;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:34:39:4.2:105.6,4.2,0:34:0:-108.4:108.4\n2\t150181733\t118294:2\tG\t]2:150174624]G\t99\tPASS\tEVDNC=ASSMB;INSERTION=T;MAPQ=60;MATEID=118294:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_150160501_150185501_19C;SPAN=7109;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:34:39:4.2:105.6,4.2,0:34:0:-108.4:108.4\n2\t151184691\t118701:1\tT\tT[2:151184979[\t44\tPASS\tEVDNC=ASSMB;HOMSEQ=T;MAPQ=60;MATEID=118701:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_151165001_151190001_57C;SPAN=288;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:18:55:44:44,0,93.5:18:0:-43.96:44.97\n2\t151184979\t118701:2\tT\t]2:151184691]T\t44\tPASS\tEVDNC=ASSMB;HOMSEQ=T;MAPQ=60;MATEID=118701:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_151165001_151190001_57C;SPAN=288;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:18:55:44:44,0,93.5:18:0:-43.96:44.97\n2\t154039258\t119963:1\tG\tG[2:154042666[\t65\tPASS\tEVDNC=ASSMB;INSERTION=GATT;MAPQ=60;MATEID=119963:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_2_154031501_154056501_62C;SPAN=3408;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:25:61:65.6:65.6,0,85.4:25:0:-65.38:65.57\n2\t154042666\t119963:2\tA\t]2:154039258]A\t65\tPASS\tEVDNC=ASSMB;INSERTION=GATT;MAPQ=60;MATEID=119963:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_2_154031501_154056501_62C;SPAN=3408;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:25:61:65.6:65.6,0,85.4:25:0:-65.38:65.57\n2\t154150374\t125028:1\tT\t[2:166690583[T\t99\tPASS\tDISC_MAPQ=19;EVDNC=ASDIS;INSERTION=A;MAPQ=47;MATEID=125028:2;MATENM=10;NM=0;NUMPARTS=2;SCTG=c_2_166673501_166698501_5C;SPAN=12540209;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:69:21:19.2:211.2,19.2,0:64:17:-211.3:211.3\n2\t155019728\t120494:1\tA\t]2:155343836]A\t34\tPASS\tDISC_MAPQ=255;EVDNC=ASDIS;MAPQ=60;MATEID=120494:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_155330001_155355001_14C;SPAN=324108;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:31:34.4:34.4,0,41:9:10:-34.2:34.27\n2\t155034681\t120386:1\tT\tT[2:155034983[\t99\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=CTGCTGTTACTTTTT;MAPQ=60;MATEID=120386:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_155011501_155036501_107C;SPAN=302;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:47:59:9.8:138.5,0,9.8:41:12:-145.2:145.2\n2\t155034983\t120386:2\tC\t]2:155034681]C\t99\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=CTGCTGTTACTTTTT;MAPQ=60;MATEID=120386:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_155011501_155036501_107C;SPAN=302;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:47:59:9.8:138.5,0,9.8:41:12:-145.2:145.2\n2\t155343836\t120494:2\tG\tG[2:155019728[\t34\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;MAPQ=60;MATEID=120494:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_155330001_155355001_14C;SPAN=324108;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:31:34.4:34.4,0,41:9:10:-34.2:34.27\n2\t157171629\t940773:1\tA\t]X:105542844]A\t29\tPASS\tEVDNC=ASSMB;HOMSEQ=AAAAT;MAPQ=60;MATEID=940773:2;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_23_105521501_105546501_0C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:10:10:2.7:29.7,2.7,0:10:0:-29.71:29.71\n2\t157576837\t121345:1\tT\tT[2:157577155[\t99\tPASS\tEVDNC=ASSMB;HOMSEQ=TGAAATTTTCTT;MAPQ=60;MATEID=121345:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_157559501_157584501_73C;SPAN=318;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:43:44:12.3:135.3,12.3,0:43:0:-135.3:135.3\n2\t157577155\t121345:2\tT\t]2:157576837]T\t99\tPASS\tEVDNC=ASSMB;HOMSEQ=TGAAATTTTCTT;MAPQ=60;MATEID=121345:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_157559501_157584501_73C;SPAN=318;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:43:44:12.3:135.3,12.3,0:43:0:-135.3:135.3\n2\t158805484\t121844:1\tC\tC[2:158806361[\t60\tPASS\tEVDNC=ASSMB;HOMSEQ=GC;MAPQ=60;MATEID=121844:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_2_158784501_158809501_18C;SPAN=877;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:23:55:60.5:60.5,0,77:23:0:-60.46:60.59\n2\t158806361\t121844:2\tG\t]2:158805484]G\t60\tPASS\tEVDNC=ASSMB;HOMSEQ=GC;MAPQ=60;MATEID=121844:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_2_158784501_158809501_18C;SPAN=877;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:23:55:60.5:60.5,0,77:23:0:-60.46:60.59\n2\t159292615\t122074:1\tC\tC[2:159295138[\t99\tPASS\tEVDNC=ASSMB;HOMSEQ=TAGAATTTC;MAPQ=60;MATEID=122074:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_2_159274501_159299501_119C;SPAN=2523;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:36:42:1.8:108.9,1.8,0:36:0:-114:114\n2\t159295138\t122074:2\tT\t]2:159292615]T\t99\tPASS\tEVDNC=ASSMB;HOMSEQ=TAGAATTTC;MAPQ=60;MATEID=122074:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_2_159274501_159299501_119C;SPAN=2523;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:36:42:1.8:108.9,1.8,0:36:0:-114:114\n2\t161095746\t122996:2\tC\tC]1:32790315]\t19\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=122996:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:32790315(+)-2:161095746(+)__2_161087501_161112501D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:24:19.7:19.7,0,39.5:0:8:-19.66:20.07\n2\t161386035\t123118:1\tA\tA[2:161388256[\t16\tPASS\tEVDNC=ASSMB;HOMSEQ=AAAA;MAPQ=60;MATEID=123118:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_161381501_161406501_28C;SPAN=2221;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:58:16.7:16.7,0,128.9:10:0:-16.71:21.77\n2\t161388256\t123118:2\tA\t]2:161386035]A\t16\tPASS\tEVDNC=ASSMB;HOMSEQ=AAAA;MAPQ=60;MATEID=123118:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_161381501_161406501_28C;SPAN=2221;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:58:16.7:16.7,0,128.9:10:0:-16.71:21.77\n2\t161475875\t123145:1\tC\tC[2:161477530[\t99\tPASS\tDISC_MAPQ=55;EVDNC=DSCRD;IMPRECISE;MAPQ=55;MATEID=123145:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=2:161475875(+)-2:161477530(-)__2_161455001_161480001D;SPAN=1655;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:77:15:21.3:234.3,21.3,0:0:77:-234.4:234.4\n2\t161477530\t123145:2\tG\t]2:161475875]G\t99\tPASS\tDISC_MAPQ=58;EVDNC=DSCRD;IMPRECISE;MAPQ=58;MATEID=123145:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=2:161475875(+)-2:161477530(-)__2_161455001_161480001D;SPAN=1655;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:77:15:21.3:234.3,21.3,0:0:77:-234.4:234.4\n2\t162753054\t123497:1\tC\tC]9:24546560]\t17\tPASS\tDISC_MAPQ=23;EVDNC=DSCRD;IMPRECISE;MAPQ=23;MATEID=123497:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=2:162753054(+)-9:24546560(+)__2_162729001_162754001D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:34:17:17,0,66.5:0:8:-16.85:18.63\n2\t165158185\t124267:1\tG\tG[2:165160235[\t67\tPASS\tEVDNC=ASSMB;HOMSEQ=TG;MAPQ=60;MATEID=124267:2;MATENM=3;NM=0;NUMPARTS=2;SCTG=c_2_165154501_165179501_143C;SPAN=2050;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:25:55:67.1:67.1,0,70.4:25:0:-67.07:67.07\n2\t165160235\t124267:2\tT\t]2:165158185]T\t67\tPASS\tEVDNC=ASSMB;HOMSEQ=TG;MAPQ=60;MATEID=124267:1;MATENM=0;NM=3;NUMPARTS=2;SCTG=c_2_165154501_165179501_143C;SPAN=2050;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:25:55:67.1:67.1,0,70.4:25:0:-67.07:67.07\n2\t165411013\t124385:1\tC\tC[2:165411322[\t99\tPASS\tEVDNC=ASSMB;HOMSEQ=AAAAGCTCCAGACCC;MAPQ=60;MATEID=124385:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_165399501_165424501_116C;SPAN=309;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:35:42:1.4:103.7,0,1.4:35:0:-109.7:109.7\n2\t165411322\t124385:2\tA\t]2:165411013]A\t99\tPASS\tEVDNC=ASSMB;HOMSEQ=AAAAGCTCCAGACCC;MAPQ=60;MATEID=124385:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_165399501_165424501_116C;SPAN=309;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:35:42:1.4:103.7,0,1.4:35:0:-109.7:109.7\n2\t166689462\t125038:1\tA\tA[2:166690576[\t82\tPASS\tDISC_MAPQ=46;EVDNC=DSCRD;IMPRECISE;MAPQ=46;MATEID=125038:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=2:166689462(+)-2:166690576(-)__2_166673501_166698501D;SPAN=1114;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:27:16:7.5:82.5,7.5,0:0:27:-82.52:82.52\n2\t166690576\t125038:2\tT\t]2:166689462]T\t82\tPASS\tDISC_MAPQ=37;EVDNC=DSCRD;IMPRECISE;MAPQ=37;MATEID=125038:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=2:166689462(+)-2:166690576(-)__2_166673501_166698501D;SPAN=1114;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:27:16:7.5:82.5,7.5,0:0:27:-82.52:82.52\n2\t166690583\t125028:2\tA\t[2:154150374[A\t99\tPASS\tDISC_MAPQ=42;EVDNC=ASDIS;INSERTION=A;MAPQ=60;MATEID=125028:1;MATENM=0;NM=10;NUMPARTS=2;SCTG=c_2_166673501_166698501_5C;SPAN=12540209;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:69:21:19.2:211.2,19.2,0:64:17:-211.3:211.3\n2\t168039311\t125455:1\tG\tG[2:168039617[\t99\tPASS\tEVDNC=ASSMB;HOMSEQ=AAAAAAGCAGATCAG;MAPQ=60;MATEID=125455:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_168021001_168046001_91C;SPAN=306;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:38:39:10.8:118.8,10.8,0:38:0:-118.8:118.8\n2\t168039617\t125455:2\tA\t]2:168039311]A\t99\tPASS\tEVDNC=ASSMB;HOMSEQ=AAAAAAGCAGATCAG;MAPQ=60;MATEID=125455:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_168021001_168046001_91C;SPAN=306;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:38:39:10.8:118.8,10.8,0:38:0:-118.8:118.8\n2\t169004595\t135835:1\tC\tC[2:194709245[\t27\tPASS\tEVDNC=ASSMB;HOMSEQ=C;MAPQ=60;MATEID=135835:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_194701501_194726501_15C;SPAN=25704650;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:30:27.8:27.8,0,47.6:11:0:-27.88:28.16\n2\t169248623\t125952:1\tA\tA[2:169254653[\t52\tPASS\tEVDNC=ASSMB;HOMSEQ=AAAAAACAGCAATGTTGA;MAPQ=60;MATEID=125952:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_169246001_169271001_139C;SPAN=6030;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:19:37:39.2:52.4,0,39.2:19:0:-52.39:52.39\n2\t169254653\t125952:2\tA\t]2:169248623]A\t52\tPASS\tEVDNC=ASSMB;HOMSEQ=AAAAAACAGCAATGTTGA;MAPQ=60;MATEID=125952:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_169246001_169271001_139C;SPAN=6030;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:19:37:39.2:52.4,0,39.2:19:0:-52.39:52.39\n2\t169785008\t126220:1\tC\tC[2:169787442[\t82\tPASS\tEVDNC=ASSMB;HOMSEQ=TCATTATTTTC;MAPQ=60;MATEID=126220:2;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_2_169785001_169810001_42C;SPAN=2434;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:27:25:7.5:82.5,7.5,0:27:0:-82.52:82.52\n2\t169787442\t126220:2\tT\t]2:169785008]T\t82\tPASS\tEVDNC=ASSMB;HOMSEQ=TCATTATTTTC;MAPQ=60;MATEID=126220:1;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_2_169785001_169810001_42C;SPAN=2434;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:27:25:7.5:82.5,7.5,0:27:0:-82.52:82.52\n2\t171438928\t126956:1\tC\tC[12:104125233[\t99\tPASS\tDISC_MAPQ=60;EVDNC=TSI_L;HOMSEQ=TCAGTC;MAPQ=60;MATEID=126956:2;MATENM=0;NM=2;NUMPARTS=3;SCTG=c_2_171426501_171451501_8C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:47:30:12.9:141.9,12.9,0:46:9:-141.9:141.9\n2\t171976067\t127221:1\tA\t[Un_JTFH01001495v1_decoy:1[A\t99\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=127221:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_2_171965501_171990501_6C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:45:27:12.6:138.6,12.6,0:45:0:-138.6:138.6\n2\t171976069\t987138:1\tC\tC[Un_KN707623v1_decoy:1[\t75\tPASS\tDISC_MAPQ=255;EVDNC=TSI_L;MAPQ=60;MATEID=987138:2;MATENM=2;NM=0;NUMPARTS=7;REPSEQ=CGACGA;SCTG=c_474_1_3784_1C;SPAN=-1;SUBN=1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:32:10:8.6:75.4,8.6,0:32:0:-75.43:75.43\n2\t172041326\t127279:1\tG\tG[2:172045508[\t59\tPASS\tDISC_MAPQ=52;EVDNC=ASDIS;HOMSEQ=AAAATTAGCCGGGCGTGGTGG;MAPQ=60;MATEID=127279:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_2_172039001_172064001_63C;SPAN=4182;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:20:13:5.4:59.4,5.4,0:12:11:-59.41:59.41\n2\t172045508\t127279:2\tA\t]2:172041326]A\t59\tPASS\tDISC_MAPQ=49;EVDNC=ASDIS;HOMSEQ=AAAATTAGCCGGGCGTGGTGG;MAPQ=60;MATEID=127279:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_2_172039001_172064001_63C;SPAN=4182;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:20:13:5.4:59.4,5.4,0:12:11:-59.41:59.41\n2\t172139606\t127333:1\tT\tT[2:172142746[\t21\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=127333:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=2:172139606(+)-2:172142746(-)__2_172137001_172162001D;SPAN=3140;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:29:21.5:21.5,0,51.2:0:9:-21.56:22.23\n2\t172142746\t127333:2\tA\t]2:172139606]A\t21\tPASS\tDISC_MAPQ=45;EVDNC=DSCRD;IMPRECISE;MAPQ=45;MATEID=127333:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=2:172139606(+)-2:172142746(-)__2_172137001_172162001D;SPAN=3140;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:29:21.5:21.5,0,51.2:0:9:-21.56:22.23\n2\t173287016\t127742:1\tT\tT[2:173287318[\t51\tPASS\tEVDNC=ASSMB;HOMSEQ=CTCTTTAACTTTTT;MAPQ=60;MATEID=127742:2;MATENM=8;NM=0;NUMPARTS=2;SCTG=c_2_173264001_173289001_76C;SPAN=302;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:18:28:18.5:51.5,0,18.5:18:0:-52.37:52.37\n2\t173287318\t127742:2\tC\t]2:173287016]C\t51\tPASS\tEVDNC=ASSMB;HOMSEQ=CTCTTTAACTTTTT;MAPQ=60;MATEID=127742:1;MATENM=0;NM=8;NUMPARTS=2;SCTG=c_2_173264001_173289001_76C;SPAN=302;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:18:28:18.5:51.5,0,18.5:18:0:-52.37:52.37\n2\t176400917\t128762:1\tT\tT[2:176407313[\t99\tPASS\tEVDNC=ASSMB;HOMSEQ=TATT;MAPQ=60;MATEID=128762:2;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_2_176400001_176425001_18C;SPAN=6396;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:35:22:9.6:105.6,9.6,0:35:0:-105.6:105.6\n2\t176407313\t128762:2\tT\t]2:176400917]T\t99\tPASS\tEVDNC=ASSMB;HOMSEQ=TATT;MAPQ=60;MATEID=128762:1;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_2_176400001_176425001_18C;SPAN=6396;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:35:22:9.6:105.6,9.6,0:35:0:-105.6:105.6\n2\t177252359\t129060:1\tA\tA[2:177259301[\t27\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=129060:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=2:177252359(+)-2:177259301(-)__2_177257501_177282501D;SPAN=6942;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:19:17.9:27.8,0,17.9:0:10:-27.73:27.73\n2\t177259301\t129060:2\tC\t]2:177252359]C\t27\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=129060:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=2:177252359(+)-2:177259301(-)__2_177257501_177282501D;SPAN=6942;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:19:17.9:27.8,0,17.9:0:10:-27.73:27.73\n2\t177422909\t129133:1\tC\tC[2:177423334[\t99\tPASS\tEVDNC=ASSMB;INSERTION=AGCCAAACAG;MAPQ=60;MATEID=129133:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_177404501_177429501_28C;SPAN=425;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:34:38:7.2:108.9,7.2,0:34:0:-109.6:109.6\n2\t177423334\t129133:2\tT\t]2:177422909]T\t99\tPASS\tEVDNC=ASSMB;INSERTION=AGCCAAACAG;MAPQ=60;MATEID=129133:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_177404501_177429501_28C;SPAN=425;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:34:38:7.2:108.9,7.2,0:34:0:-109.6:109.6\n2\t178826569\t129781:1\tT\t]2:178874593]T\t29\tPASS\tEVDNC=ASSMB;INSERTION=AGTTGTTTCCAACTGCTTTGCAG;MAPQ=60;MATEID=129781:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_178874501_178899501_47C;SPAN=48024;SUBN=2;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:25:29.3:29.3,0,32.6:11:0:-29.28:29.3\n2\t178838895\t129763:1\tA\tA[2:178839864[\t92\tPASS\tEVDNC=ASSMB;INSERTION=TGAAAGTA;MAPQ=60;MATEID=129763:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_178825501_178850501_1C;SPAN=969;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:31:37:0.3:92.4,0.3,0:31:0:-97.36:97.36\n2\t178839864\t129763:2\tC\t]2:178838895]C\t92\tPASS\tEVDNC=ASSMB;INSERTION=TGAAAGTA;MAPQ=60;MATEID=129763:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_178825501_178850501_1C;SPAN=969;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:31:37:0.3:92.4,0.3,0:31:0:-97.36:97.36\n2\t178874593\t129781:2\tC\tC[2:178826569[\t29\tPASS\tEVDNC=ASSMB;INSERTION=AGTTGTTTCCAACTGCTTTGCAG;MAPQ=60;MATEID=129781:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_178874501_178899501_47C;SPAN=48024;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:25:29.3:29.3,0,32.6:11:0:-29.28:29.3\n2\t181061110\t130693:1\tT\tT[2:181061423[\t85\tPASS\tEVDNC=ASSMB;HOMSEQ=GACCACTTCT;MAPQ=60;MATEID=130693:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_181055001_181080001_61C;SPAN=313;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:28:25:7.8:85.8,7.8,0:28:0:-85.82:85.82\n2\t181061423\t130693:2\tG\t]2:181061110]G\t85\tPASS\tEVDNC=ASSMB;HOMSEQ=GACCACTTCT;MAPQ=60;MATEID=130693:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_181055001_181080001_61C;SPAN=313;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:28:25:7.8:85.8,7.8,0:28:0:-85.82:85.82\n2\t182289080\t131078:1\tC\t]2:182289280]C\t26\tPASS\tEVDNC=ASSMB;HOMSEQ=CT;MAPQ=60;MATEID=131078:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_182280001_182305001_6C;SPAN=200;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:58:26.6:26.6,0,119:13:0:-26.61:29.96\n2\t182289280\t131078:2\tT\tT[2:182289080[\t26\tPASS\tEVDNC=ASSMB;HOMSEQ=CT;MAPQ=60;MATEID=131078:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_182280001_182305001_6C;SPAN=200;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:58:26.6:26.6,0,119:13:0:-26.61:29.96\n2\t183929705\t131661:1\tA\tA[2:183939304[\t99\tPASS\tEVDNC=ASSMB;HOMSEQ=GA;MAPQ=60;MATEID=131661:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_183921501_183946501_80C;SPAN=9599;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:32:37:3.6:99,3.6,0:32:0:-101.7:101.7\n2\t183939304\t131661:2\tG\t]2:183929705]G\t99\tPASS\tEVDNC=ASSMB;HOMSEQ=GA;MAPQ=60;MATEID=131661:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_183921501_183946501_80C;SPAN=9599;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:32:37:3.6:99,3.6,0:32:0:-101.7:101.7\n2\t186472273\t132612:1\tT\tT[2:186473340[\t31\tPASS\tEVDNC=ASSMB;INSERTION=CCCCATGGTCTCCCTCTCCCTCTTTCCATGGTCTCCC;MAPQ=60;MATEID=132612:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_186469501_186494501_55C;SPAN=1067;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:29:31.4:31.4,0,41.3:12:0:-31.46:31.54\n2\t186473340\t132612:2\tG\t]2:186472273]G\t31\tPASS\tEVDNC=ASSMB;INSERTION=CCCCATGGTCTCCCTCTCCCTCTTTCCATGGTCTCCC;MAPQ=60;MATEID=132612:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_186469501_186494501_55C;SPAN=1067;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:29:31.4:31.4,0,41.3:12:0:-31.46:31.54\n2\t187785173\t133134:1\tG\t]2:194591082]G\t92\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=GGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGC;MAPQ=60;MATEID=133134:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_187768001_187793001_76C;SPAN=6805909;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:31:20:8.4:92.4,8.4,0:26:6:-92.42:92.42\n2\t189753180\t133859:1\tC\tC[2:189765979[\t85\tPASS\tEVDNC=ASSMB;HOMSEQ=AC;MAPQ=60;MATEID=133859:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_2_189752501_189777501_15C;SPAN=12799;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:29:37:6.2:85.4,0,6.2:29:0:-89.11:89.11\n2\t189765979\t133859:2\tA\t]2:189753180]A\t85\tPASS\tEVDNC=ASSMB;HOMSEQ=AC;MAPQ=39;MATEID=133859:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_2_189752501_189777501_15C;SPAN=12799;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:29:37:6.2:85.4,0,6.2:29:0:-89.11:89.11\n2\t191154732\t134413:1\tC\t]2:191154907]C\t41\tPASS\tEVDNC=ASSMB;HOMSEQ=CAGTT;MAPQ=60;MATEID=134413:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_191149001_191174001_96C;SPAN=175;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:19:76:41.6:41.6,0,147.2:19:0:-41.36:44.82\n2\t191154907\t134413:2\tT\tT[2:191154732[\t41\tPASS\tEVDNC=ASSMB;HOMSEQ=CAGTT;MAPQ=60;MATEID=134413:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_191149001_191174001_96C;SPAN=175;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:19:76:41.6:41.6,0,147.2:19:0:-41.36:44.82\n2\t191834730\t134685:1\tT\t]2:191863633]T\t75\tPASS\tEVDNC=ASSMB;INSERTION=TAAT;MAPQ=60;MATEID=134685:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_191859501_191884501_27C;SPAN=28903;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:26:36:13.1:75.8,0,13.1:26:0:-78.01:78.01\n2\t191863633\t134685:2\tT\tT[2:191834730[\t75\tPASS\tEVDNC=ASSMB;INSERTION=TAAT;MAPQ=60;MATEID=134685:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_191859501_191884501_27C;SPAN=28903;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:26:36:13.1:75.8,0,13.1:26:0:-78.01:78.01\n2\t193213246\t135182:1\tC\t[11:25101793[C\t85\tPASS\tDISC_MAPQ=3;EVDNC=ASDIS;MAPQ=11;MATEID=135182:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_2_193207001_193232001_9C;SPAN=-1;SUBN=10;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:28:27:7.8:85.8,7.8,0:25:7:-85.82:85.82\n2\t193680440\t702567:1\tT\tT[14:64980572[\t44\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=702567:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=2:193680440(+)-14:64980572(-)__14_64974001_64999001D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:16:31:31.1:44.3,0,31.1:0:16:-44.17:44.17\n2\t193824778\t135427:1\tG\tG[2:193834042[\t99\tPASS\tEVDNC=ASSMB;HOMSEQ=G;MAPQ=60;MATEID=135427:2;MATENM=2;NM=3;NUMPARTS=2;SCTG=c_2_193819501_193844501_3C;SPAN=9264;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:47:21:12.9:141.9,12.9,0:47:0:-141.9:141.9\n2\t193834042\t135427:2\tG\t]2:193824778]G\t99\tPASS\tEVDNC=ASSMB;HOMSEQ=G;MAPQ=60;MATEID=135427:1;MATENM=3;NM=2;NUMPARTS=2;SCTG=c_2_193819501_193844501_3C;SPAN=9264;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:47:21:12.9:141.9,12.9,0:47:0:-141.9:141.9\n2\t194591082\t133134:2\tC\tC[2:187785173[\t92\tPASS\tDISC_MAPQ=4;EVDNC=ASDIS;HOMSEQ=GGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGC;MAPQ=60;MATEID=133134:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_187768001_187793001_76C;SPAN=6805909;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:31:20:8.4:92.4,8.4,0:26:6:-92.42:92.42\n2\t194709245\t135835:2\tC\t]2:169004595]C\t27\tPASS\tEVDNC=ASSMB;HOMSEQ=C;MAPQ=60;MATEID=135835:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_194701501_194726501_15C;SPAN=25704650;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:30:27.8:27.8,0,47.6:11:0:-27.88:28.16\n2\t195871703\t136348:1\tA\tA[2:195871967[\t42\tPASS\tEVDNC=ASSMB;HOMSEQ=AAACTACTTAAGGGAA;MAPQ=60;MATEID=136348:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_2_195853001_195878001_3C;SPAN=264;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:16:36:42.8:42.8,0,46.1:16:0:-42.7:42.71\n2\t195871967\t136348:2\tA\t]2:195871703]A\t42\tPASS\tEVDNC=ASSMB;HOMSEQ=AAACTACTTAAGGGAA;MAPQ=60;MATEID=136348:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_2_195853001_195878001_3C;SPAN=264;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:16:36:42.8:42.8,0,46.1:16:0:-42.7:42.71\n2\t198602574\t13050:2\tT\tT]1:53954555]\t16\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AAT;MAPQ=60;MATEID=13050:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_53949001_53974001_99C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:94:16.7:16.7,0,218:11:5:-16.49:26.94\n2\t200330213\t137704:1\tC\tC[2:200330215[\t99\tPASS\tEVDNC=ASSMB;INSERTION=TGTTATTGTTAATCAGTATTGGTATTTGAATAGGGATATCCAAAGTATTTGCTGAACAGAAAGCATGTTGTTTTAGGTCCATATTTTCCCTGAAAGTATTTTTATTATTATCATTTTTAAAATTTTTCCCTCCAATGGTCTTATTTAAATTAATTTACTTAACAAGCCGTATATTCCTTGTGG;MAPQ=60;MATEID=137704:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_2_200312001_200337001_67C;SPAN=2;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:54:46:15:165,15,0:54:0:-165:165\n2\t200330215\t137704:2\tA\t]2:200330213]A\t99\tPASS\tEVDNC=ASSMB;INSERTION=TGTTATTGTTAATCAGTATTGGTATTTGAATAGGGATATCCAAAGTATTTGCTGAACAGAAAGCATGTTGTTTTAGGTCCATATTTTCCCTGAAAGTATTTTTATTATTATCATTTTTAAAATTTTTCCCTCCAATGGTCTTATTTAAATTAATTTACTTAACAAGCCGTATATTCCTTGTGG;MAPQ=60;MATEID=137704:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_2_200312001_200337001_67C;SPAN=2;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:54:46:15:165,15,0:54:0:-165:165\n2\t200892641\t137952:1\tT\t]2:200999744]T\t69\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=T;MAPQ=60;MATEID=137952:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_200998001_201023001_37C;SPAN=107103;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:23:14:6.3:69.3,6.3,0:19:16:-69.32:69.32\n2\t200999744\t137952:2\tT\tT[2:200892641[\t69\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=T;MAPQ=60;MATEID=137952:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_200998001_201023001_37C;SPAN=107103;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:23:14:6.3:69.3,6.3,0:19:16:-69.32:69.32\n2\t201224090\t138022:1\tG\tG]2:201224836]\t32\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=138022:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=2:201224090(+)-2:201224836(+)__2_201218501_201243501D;SPAN=746;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:25:29.3:32.6,0,29.3:0:12:-32.59:32.59\n2\t201224836\t138022:2\tG\tG]2:201224090]\t32\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=138022:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=2:201224090(+)-2:201224836(+)__2_201218501_201243501D;SPAN=746;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:25:29.3:32.6,0,29.3:0:12:-32.59:32.59\n2\t204726519\t138791:1\tA\tA[2:204836612[\t33\tPASS\tEVDNC=ASSMB;INSERTION=TCACCTT;MAPQ=60;MATEID=138791:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_204820001_204845001_17C;SPAN=110093;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:11:7:3:33,3,0:11:0:-33.01:33.01\n2\t204836612\t138791:2\tG\t]2:204726519]G\t33\tPASS\tEVDNC=ASSMB;INSERTION=TCACCTT;MAPQ=60;MATEID=138791:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_204820001_204845001_17C;SPAN=110093;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:11:7:3:33,3,0:11:0:-33.01:33.01\n2\t207609829\t139331:1\tG\tG[2:207612088[\t29\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=139331:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=2:207609829(+)-2:207612088(-)__2_207588501_207613501D;SPAN=2259;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:10:12:0:29.7,0,0:0:10:-31.35:31.35\n2\t207612088\t139331:2\tT\t]2:207609829]T\t29\tPASS\tDISC_MAPQ=49;EVDNC=DSCRD;IMPRECISE;MAPQ=49;MATEID=139331:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=2:207609829(+)-2:207612088(-)__2_207588501_207613501D;SPAN=2259;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:10:12:0:29.7,0,0:0:10:-31.35:31.35\n2\t208098598\t139470:1\tT\t]Un_KN707702v1_decoy:6466]T\t82\tPASS\tDISC_MAPQ=255;EVDNC=TSI_G;HOMSEQ=AAAATTTTTTGGGTACATAGTAGGTATATATATTTAA;INSERTION=A;MAPQ=60;MATEID=139470:2;MATENM=1;NM=1;NUMPARTS=3;SCTG=c_2_208078501_208103501_28C;SPAN=-1;SUBN=5;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:27:19:7.5:82.5,7.5,0:27:0:-82.52:82.52\n2\t208587006\t139691:1\tT\tT[2:208587320[\t10\tPASS\tEVDNC=ASSMB;HOMSEQ=GTTTGTTGATTTTT;MAPQ=60;MATEID=139691:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_208568501_208593501_24C;SPAN=314;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:5:22:10.4:10.4,0,43.4:5:0:-10.32:11.56\n2\t208587320\t139691:2\tG\t]2:208587006]G\t10\tPASS\tEVDNC=ASSMB;HOMSEQ=GTTTGTTGATTTTT;MAPQ=60;MATEID=139691:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_208568501_208593501_24C;SPAN=314;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:5:22:10.4:10.4,0,43.4:5:0:-10.32:11.56\n2\t212191435\t140743:1\tA\t]2:212191551]A\t53\tPASS\tEVDNC=ASSMB;INSERTION=ACATGTTATACCTGTTATATATA;MAPQ=60;MATEID=140743:2;MATENM=2;NM=1;NUMPARTS=2;SCTG=c_2_212170001_212195001_87C;SPAN=116;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:20:44:53.6:53.6,0,56.9:20:0:-53.65:53.66\n2\t212191551\t140743:2\tT\tT[2:212191435[\t53\tPASS\tEVDNC=ASSMB;INSERTION=ACATGTTATACCTGTTATATATA;MAPQ=60;MATEID=140743:1;MATENM=1;NM=2;NUMPARTS=2;SCTG=c_2_212170001_212195001_87C;SPAN=116;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:20:44:53.6:53.6,0,56.9:20:0:-53.65:53.66\n2\t212709962\t140980:1\tC\tC[2:212710254[\t69\tPASS\tEVDNC=ASSMB;HOMSEQ=AAAATAGCAAGGCCC;MAPQ=60;MATEID=140980:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_212709001_212734001_32C;SPAN=292;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:23:21:6.3:69.3,6.3,0:23:0:-69.32:69.32\n2\t212710254\t140980:2\tA\t]2:212709962]A\t69\tPASS\tEVDNC=ASSMB;HOMSEQ=AAAATAGCAAGGCCC;MAPQ=60;MATEID=140980:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_212709001_212734001_32C;SPAN=292;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:23:21:6.3:69.3,6.3,0:23:0:-69.32:69.32\n2\t213306364\t141169:1\tT\tT[Un_KN707739v1_decoy:1[\t75\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=141169:2;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_2_213297001_213322001_17C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:25:11:6.9:75.9,6.9,0:25:0:-75.92:75.92\n2\t213642624\t141246:1\tA\tA[2:213642846[\t9\tPASS\tEVDNC=ASSMB;HOMSEQ=AAAAGAGAGACTGGTCTA;MAPQ=60;MATEID=141246:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_213640001_213665001_27C;SPAN=222;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:4:13:9.5:9.5,0,22.7:4:0:-9.55:9.863\n2\t213642846\t141246:2\tA\t]2:213642624]A\t9\tPASS\tEVDNC=ASSMB;HOMSEQ=AAAAGAGAGACTGGTCTA;MAPQ=60;MATEID=141246:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_213640001_213665001_27C;SPAN=222;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:4:13:9.5:9.5,0,22.7:4:0:-9.55:9.863\n2\t214647889\t141837:1\tA\t]2:215113891]A\t38\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=ATT;MAPQ=60;MATEID=141837:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_2_215110001_215135001_11C;SPAN=466002;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:18:5:38,0,5:10:7:-39.01:39.01\n2\t215113891\t141837:2\tT\tT[2:214647889[\t38\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=ATT;MAPQ=60;MATEID=141837:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_2_215110001_215135001_11C;SPAN=466002;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:18:5:38,0,5:10:7:-39.01:39.01\n2\t215919785\t142169:1\tG\t]2:215919902]G\t30\tPASS\tEVDNC=ASSMB;INSERTION=TCTTTCCTGCAAGGGCA;MAPQ=60;MATEID=142169:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_215918501_215943501_67C;SPAN=117;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:55:30.8:30.8,0,106.7:14:0:-30.75:33.15\n2\t215919902\t142169:2\tT\tT[2:215919785[\t30\tPASS\tEVDNC=ASSMB;INSERTION=TCTTTCCTGCAAGGGCA;MAPQ=60;MATEID=142169:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_215918501_215943501_67C;SPAN=117;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:55:30.8:30.8,0,106.7:14:0:-30.75:33.15\n2\t216225272\t142263:1\tT\tT[2:216227775[\t66\tPASS\tDISC_MAPQ=55;EVDNC=DSCRD;IMPRECISE;MAPQ=55;MATEID=142263:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=2:216225272(+)-2:216227775(-)__2_216212501_216237501D;SPAN=2503;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:22:10:6:66,6,0:0:22:-66.02:66.02\n2\t216227775\t142263:2\tC\t]2:216225272]C\t66\tPASS\tDISC_MAPQ=59;EVDNC=DSCRD;IMPRECISE;MAPQ=59;MATEID=142263:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=2:216225272(+)-2:216227775(-)__2_216212501_216237501D;SPAN=2503;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:22:10:6:66,6,0:0:22:-66.02:66.02\n2\t216228074\t142267:1\tT\tT[2:216228389[\t69\tPASS\tEVDNC=ASSMB;HOMSEQ=TCTTTCTTTCTTTCT;MAPQ=60;MATEID=142267:2;MATENM=3;NM=0;NUMPARTS=2;SCTG=c_2_216212501_216237501_20C;SPAN=315;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:23:18:6.3:69.3,6.3,0:23:0:-69.32:69.32\n2\t216228389\t142267:2\tT\t]2:216228074]T\t69\tPASS\tEVDNC=ASSMB;HOMSEQ=TCTTTCTTTCTTTCT;MAPQ=60;MATEID=142267:1;MATENM=0;NM=3;NUMPARTS=2;SCTG=c_2_216212501_216237501_20C;SPAN=315;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:23:18:6.3:69.3,6.3,0:23:0:-69.32:69.32\n2\t217091173\t142474:1\tG\tG[2:217092544[\t69\tPASS\tEVDNC=ASSMB;HOMSEQ=GGTGG;MAPQ=60;MATEID=142474:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_217070001_217095001_2C;SPAN=1371;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:23:21:6.3:69.3,6.3,0:23:0:-69.32:69.32\n2\t217092544\t142474:2\tG\t]2:217091173]G\t69\tPASS\tEVDNC=ASSMB;HOMSEQ=GGTGG;MAPQ=60;MATEID=142474:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_217070001_217095001_2C;SPAN=1371;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:23:21:6.3:69.3,6.3,0:23:0:-69.32:69.32\n2\t219367977\t143177:1\tC\tC[2:219368443[\t89\tPASS\tDISC_MAPQ=56;EVDNC=ASDIS;HOMSEQ=CCAAGATCACACCATTGCACTCCAGCCTGGGTGACAGAGC;MAPQ=60;MATEID=143177:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_2_219348501_219373501_5C;SPAN=466;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:29:23:8.1:89.1,8.1,0:19:16:-89.12:89.12\n2\t219368443\t143177:2\tC\t]2:219367977]C\t89\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=CCAAGATCACACCATTGCACTCCAGCCTGGGTGACAGAGC;MAPQ=60;MATEID=143177:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_2_219348501_219373501_5C;SPAN=466;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:29:23:8.1:89.1,8.1,0:19:16:-89.12:89.12\n2\t220481216\t143576:1\tC\tC[2:220481540[\t35\tPASS\tEVDNC=ASSMB;HOMSEQ=TTTTC;MAPQ=60;MATEID=143576:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_2_220475501_220500501_164C;SPAN=324;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:17:5.3:35,0,5.3:12:0:-35.78:35.78\n2\t220481540\t143576:2\tT\t]2:220481216]T\t35\tPASS\tEVDNC=ASSMB;HOMSEQ=TTTTC;MAPQ=60;MATEID=143576:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_2_220475501_220500501_164C;SPAN=324;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:17:5.3:35,0,5.3:12:0:-35.78:35.78\n2\t230460594\t146493:1\tT\tT[2:230460923[\t34\tPASS\tEVDNC=ASSMB;HOMSEQ=GGTAATCTGTTTCTT;MAPQ=60;MATEID=146493:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_2_230447001_230472001_45C;SPAN=329;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:29:34.7:34.7,0,38:13:0:-34.76:34.77\n2\t230460923\t146493:2\tG\t]2:230460594]G\t34\tPASS\tEVDNC=ASSMB;HOMSEQ=GGTAATCTGTTTCTT;MAPQ=60;MATEID=146493:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_2_230447001_230472001_45C;SPAN=329;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:29:34.7:34.7,0,38:13:0:-34.76:34.77\n2\t232514141\t146962:1\tC\tC[2:232515638[\t25\tPASS\tEVDNC=ASSMB;HOMSEQ=C;MAPQ=60;MATEID=146962:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_232505001_232530001_66C;SPAN=1497;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:15:12.2:25.4,0,12.2:9:0:-25.74:25.74\n2\t232515638\t146962:2\tC\t]2:232514141]C\t25\tPASS\tEVDNC=ASSMB;HOMSEQ=C;MAPQ=60;MATEID=146962:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_232505001_232530001_66C;SPAN=1497;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:15:12.2:25.4,0,12.2:9:0:-25.74:25.74\n2\t237405139\t148427:1\tT\t]2:237625329]T\t99\tPASS\tEVDNC=ASSMB;HOMSEQ=TC;MAPQ=60;MATEID=148427:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_237601001_237626001_14C;SPAN=220190;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:34:15:9.3:102.3,9.3,0:34:0:-102.3:102.3\n2\t237517179\t148353:1\tG\t]2:237517715]G\t43\tPASS\tDISC_MAPQ=58;EVDNC=DSCRD;IMPRECISE;MAPQ=58;MATEID=148353:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=2:237517179(-)-2:237517715(+)__2_237503001_237528001D;SPAN=536;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:19:69:43.4:43.4,0,129.2:0:19:-43.32:45.76\n2\t237517715\t148353:2\tG\tG[2:237517179[\t43\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=148353:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=2:237517179(-)-2:237517715(+)__2_237503001_237528001D;SPAN=536;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:19:69:43.4:43.4,0,129.2:0:19:-43.32:45.76\n2\t237561091\t148404:1\tT\t]17:497801]T\t21\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TT;MAPQ=60;MATEID=148404:2;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_2_237552001_237577001_84C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:41:21.5:21.5,0,80.9:7:6:-21.49:23.47\n2\t237623393\t716693:1\tC\tC[14:104206456[\t33\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=716693:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_14_104198501_104223501_154C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:22:20.3:33.5,0,20.3:12:0:-33.55:33.55\n2\t237625329\t148427:2\tC\tC[2:237405139[\t99\tPASS\tEVDNC=ASSMB;HOMSEQ=TC;MAPQ=60;MATEID=148427:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_237601001_237626001_14C;SPAN=220190;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:34:15:9.3:102.3,9.3,0:34:0:-102.3:102.3\n2\t238591867\t148627:1\tC\tC[2:238593091[\t23\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=148627:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=2:238591867(+)-2:238593091(-)__2_238581001_238606001D;SPAN=1224;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:11:3.5:23.3,0,3.5:0:8:-24.05:24.05\n2\t238593091\t148627:2\tA\t]2:238591867]A\t23\tPASS\tDISC_MAPQ=57;EVDNC=DSCRD;IMPRECISE;MAPQ=57;MATEID=148627:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=2:238591867(+)-2:238593091(-)__2_238581001_238606001D;SPAN=1224;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:11:3.5:23.3,0,3.5:0:8:-24.05:24.05\n2\t240614048\t918199:1\tC\t]22:34476818]C\t25\tPASS\tEVDNC=ASSMB;HOMSEQ=CT;MAPQ=60;MATEID=918199:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_22_34471501_34496501_39C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:17:15.2:25.1,0,15.2:9:0:-24.99:24.99\n3\t503842\t149668:1\tT\tT[3:504455[\t26\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;INSERTION=CC;MAPQ=60;MATEID=149668:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_490001_515001_9C;SPAN=613;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:37:26:26,0,65.6:5:9:-25.91:26.93\n3\t504455\t149668:2\tT\t]3:503842]T\t26\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;INSERTION=CC;MAPQ=60;MATEID=149668:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_490001_515001_9C;SPAN=613;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:37:26:26,0,65.6:5:9:-25.91:26.93\n3\t927890\t149808:1\tG\t]3:953617]G\t24\tPASS\tEVDNC=ASSMB;INSERTION=AGCCACG;MAPQ=60;MATEID=149808:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_931001_956001_12C;SPAN=25727;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:31:24.5:24.5,0,50.9:10:0:-24.3:24.91\n3\t953617\t149808:2\tA\tA[3:927890[\t24\tPASS\tEVDNC=ASSMB;INSERTION=AGCCACG;MAPQ=60;MATEID=149808:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_931001_956001_12C;SPAN=25727;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:31:24.5:24.5,0,50.9:10:0:-24.3:24.91\n3\t1263028\t149945:1\tT\tT[3:1264837[\t15\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TGT;MAPQ=60;MATEID=149945:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_1249501_1274501_18C;SPAN=1809;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:38:15.8:15.8,0,78.5:6:2:-15.73:18.19\n3\t1264837\t149945:2\tT\t]3:1263028]T\t15\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TGT;MAPQ=60;MATEID=149945:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_1249501_1274501_18C;SPAN=1809;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:38:15.8:15.8,0,78.5:6:2:-15.73:18.19\n3\t1279142\t149948:1\tG\tG[3:1279700[\t20\tPASS\tEVDNC=ASSMB;HOMSEQ=G;MAPQ=60;MATEID=149948:2;MATENM=0;NM=3;NUMPARTS=2;SCTG=c_3_1274001_1299001_10C;SPAN=558;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:70:20:20,0,155.3:12:0:-19.94:26.09\n3\t1279700\t149948:2\tG\t]3:1279142]G\t20\tPASS\tEVDNC=ASSMB;HOMSEQ=G;MAPQ=60;MATEID=149948:1;MATENM=3;NM=0;NUMPARTS=2;SCTG=c_3_1274001_1299001_10C;SPAN=558;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:70:20:20,0,155.3:12:0:-19.94:26.09\n3\t1927848\t150204:1\tC\tC[3:1930087[\t26\tPASS\tEVDNC=ASSMB;HOMSEQ=C;MAPQ=60;MATEID=150204:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_3_1911001_1936001_6C;SPAN=2239;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:45:26.9:26.9,0,86.3:12:0:-26.96:28.7\n3\t1930087\t150204:2\tC\t]3:1927848]C\t26\tPASS\tEVDNC=ASSMB;HOMSEQ=C;MAPQ=60;MATEID=150204:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_3_1911001_1936001_6C;SPAN=2239;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:45:26.9:26.9,0,86.3:12:0:-26.96:28.7\n3\t2224305\t150313:1\tT\t]3:2238399]T\t47\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TCC;MAPQ=60;MATEID=150313:2;MATENM=2;NM=2;NUMPARTS=2;SCTG=c_3_2229501_2254501_6C;SPAN=14094;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:17:33:33.8:47,0,33.8:10:10:-46.91:46.91\n3\t2238399\t150313:2\tC\tC[3:2224305[\t47\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TCC;MAPQ=60;MATEID=150313:1;MATENM=2;NM=2;NUMPARTS=2;SCTG=c_3_2229501_2254501_6C;SPAN=14094;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:17:33:33.8:47,0,33.8:10:10:-46.91:46.91\n3\t2523747\t150456:1\tC\tC[3:2567702[\t31\tPASS\tEVDNC=ASSMB;INSERTION=AATTCCCATTTCTCCTCAA;MAPQ=60;MATEID=150456:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_2548001_2573001_7C;SPAN=43955;SUBN=1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:19:14.6:31.1,0,14.6:11:0:-31.19:31.19\n3\t2567702\t150456:2\tT\t]3:2523747]T\t31\tPASS\tEVDNC=ASSMB;INSERTION=AATTCCCATTTCTCCTCAA;MAPQ=60;MATEID=150456:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_2548001_2573001_7C;SPAN=43955;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:19:14.6:31.1,0,14.6:11:0:-31.19:31.19\n3\t4025374\t150957:1\tT\tT[3:4027871[\t99\tPASS\tDISC_MAPQ=59;EVDNC=DSCRD;IMPRECISE;MAPQ=59;MATEID=150957:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=3:4025374(+)-3:4027871(-)__3_4018001_4043001D;SPAN=2497;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:55:17:15.3:168.3,15.3,0:0:55:-168.3:168.3\n3\t4027871\t150957:2\tG\t]3:4025374]G\t99\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=150957:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=3:4025374(+)-3:4027871(-)__3_4018001_4043001D;SPAN=2497;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:55:17:15.3:168.3,15.3,0:0:55:-168.3:168.3\n3\t4765626\t151198:1\tA\tA[3:4819268[\t26\tPASS\tEVDNC=ASSMB;HOMSEQ=AGA;MAPQ=60;MATEID=151198:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_4802001_4827001_11C;SPAN=53642;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:25:26:26,0,35.9:10:0:-25.98:26.09\n3\t4819268\t151198:2\tA\t]3:4765626]A\t26\tPASS\tEVDNC=ASSMB;HOMSEQ=AGA;MAPQ=60;MATEID=151198:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_4802001_4827001_11C;SPAN=53642;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:25:26:26,0,35.9:10:0:-25.98:26.09\n3\t6311359\t151854:1\tT\t]3:6311647]T\t99\tPASS\tEVDNC=ASSMB;INSERTION=GAACCTCAGTAAGT;MAPQ=60;MATEID=151854:2;MATENM=2;NM=2;NUMPARTS=2;SCTG=c_3_6296501_6321501_2C;SPAN=288;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:35:53:31.4:100.7,0,31.4:35:0:-102.5:102.5\n3\t6311647\t151854:2\tG\tG[3:6311359[\t99\tPASS\tEVDNC=ASSMB;INSERTION=GAACCTCAGTAAGT;MAPQ=60;MATEID=151854:1;MATENM=2;NM=2;NUMPARTS=2;SCTG=c_3_6296501_6321501_2C;SPAN=288;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:35:53:31.4:100.7,0,31.4:35:0:-102.5:102.5\n3\t6604527\t151993:1\tC\t[3:6612951[C\t81\tPASS\tDISC_MAPQ=60;EVDNC=TSI_L;HOMSEQ=CAATTA;MAPQ=60;MATEID=151993:2;MATENM=0;NM=0;NUMPARTS=3;REPSEQ=AA;SCTG=c_3_6590501_6615501_5C;SPAN=8424;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:28:40:18.5:81.2,0,18.5:21:11:-83.3:83.3\n3\t6604720\t151995:1\tA\tA]3:6608526]\t72\tPASS\tDISC_MAPQ=58;EVDNC=DSCRD;IMPRECISE;MAPQ=58;MATEID=151995:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=3:6604720(+)-3:6608526(+)__3_6590501_6615501D;SPAN=3806;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:23:26:3.9:72.6,3.9,0:0:23:-73.74:73.74\n3\t6608526\t151995:2\tG\tG]3:6604720]\t72\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=151995:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=3:6604720(+)-3:6608526(+)__3_6590501_6615501D;SPAN=3806;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:23:26:3.9:72.6,3.9,0:0:23:-73.74:73.74\n3\t6608570\t151999:1\tT\tT[3:6612945[\t92\tPASS\tDISC_MAPQ=59;EVDNC=DSCRD;IMPRECISE;MAPQ=59;MATEID=151999:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=3:6608570(+)-3:6612945(-)__3_6590501_6615501D;SPAN=4375;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:30:5:8.4:92.4,8.4,0:0:30:-92.42:92.42\n3\t6612945\t151999:2\tA\t]3:6608570]A\t92\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=151999:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=3:6608570(+)-3:6612945(-)__3_6590501_6615501D;SPAN=4375;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:30:5:8.4:92.4,8.4,0:0:30:-92.42:92.42\n3\t6612951\t151993:2\tT\t[3:6604527[T\t81\tPASS\tDISC_MAPQ=60;EVDNC=TSI_L;HOMSEQ=CAATTA;MAPQ=60;MATEID=151993:1;MATENM=0;NM=0;NUMPARTS=3;REPSEQ=AA;SCTG=c_3_6590501_6615501_5C;SPAN=8424;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:28:40:18.5:81.2,0,18.5:21:11:-83.3:83.3\n3\t7404156\t152269:1\tT\t]3:7437597]T\t20\tPASS\tEVDNC=ASSMB;HOMSEQ=TCT;MAPQ=60;MATEID=152269:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_7423501_7448501_25C;SPAN=33441;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:21:20.6:20.6,0,30.5:8:0:-20.51:20.65\n3\t7437597\t152269:2\tT\tT[3:7404156[\t20\tPASS\tEVDNC=ASSMB;HOMSEQ=TCT;MAPQ=60;MATEID=152269:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_7423501_7448501_25C;SPAN=33441;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:21:20.6:20.6,0,30.5:8:0:-20.51:20.65\n3\t7997094\t152479:1\tT\t]3:8055413]T\t19\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=152479:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_3_8036001_8061001_9C;SPAN=58319;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:26:19.1:19.1,0,45.5:8:0:-19.1:19.73\n3\t8055413\t152479:2\tA\tA[3:7997094[\t19\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=152479:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_3_8036001_8061001_9C;SPAN=58319;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:26:19.1:19.1,0,45.5:8:0:-19.1:19.73\n3\t9340576\t152847:1\tC\t]3:9357043]C\t15\tPASS\tEVDNC=ASSMB;INSERTION=GGATTCCATGAGTCAGGCAGAC;MAPQ=60;MATEID=152847:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_3_9334501_9359501_22C;SPAN=16467;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:50:15.8:15.8,0,108.2:9:0:-15.65:19.78\n3\t9357043\t152847:2\tA\tA[3:9340576[\t15\tPASS\tEVDNC=ASSMB;INSERTION=GGATTCCATGAGTCAGGCAGAC;MAPQ=60;MATEID=152847:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_3_9334501_9359501_22C;SPAN=16467;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:50:15.8:15.8,0,108.2:9:0:-15.65:19.78\n3\t10636914\t153237:1\tT\tT]11:78154046]\t37\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;INSERTION=AAA;MAPQ=60;MATEID=153237:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_10633001_10658001_4C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:21:14:37.1,0,14:10:4:-37.47:37.47\n3\t11599603\t518254:1\tC\tC]9:130392964]\t49\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=GAGTGCAGTGGCGCGATCTCGGCTCACTGCAAGCTC;MAPQ=60;MATEID=518254:2;MATENM=4;NM=2;NUMPARTS=2;SCTG=c_9_130389001_130414001_29C;SPAN=-1;SUBN=1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:17:12:4.5:49.5,4.5,0:9:12:-49.51:49.51\n3\t11914405\t153544:1\tT\tT[3:12871893[\t52\tPASS\tDISC_MAPQ=56;EVDNC=DSCRD;IMPRECISE;MAPQ=56;MATEID=153544:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=3:11914405(+)-3:12871893(-)__3_11907001_11932001D;SPAN=957488;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:18:7:4.8:52.8,4.8,0:0:18:-52.81:52.81\n3\t11914580\t153548:1\tA\t]3:12872086]A\t25\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=153548:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=3:11914580(-)-3:12872086(+)__3_11907001_11932001D;SPAN=957506;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:16:12.2:25.4,0,12.2:0:9:-25.35:25.35\n3\t12871893\t153544:2\tT\t]3:11914405]T\t52\tPASS\tDISC_MAPQ=53;EVDNC=DSCRD;IMPRECISE;MAPQ=53;MATEID=153544:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=3:11914405(+)-3:12871893(-)__3_11907001_11932001D;SPAN=957488;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:18:7:4.8:52.8,4.8,0:0:18:-52.81:52.81\n3\t12872086\t153548:2\tA\tA[3:11914580[\t25\tPASS\tDISC_MAPQ=54;EVDNC=DSCRD;IMPRECISE;MAPQ=54;MATEID=153548:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=3:11914580(-)-3:12872086(+)__3_11907001_11932001D;SPAN=957506;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:16:12.2:25.4,0,12.2:0:9:-25.35:25.35\n3\t13639803\t154020:1\tT\tT[3:13640772[\t75\tPASS\tDISC_MAPQ=58;EVDNC=DSCRD;IMPRECISE;MAPQ=58;MATEID=154020:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=3:13639803(+)-3:13640772(-)__3_13622001_13647001D;SPAN=969;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:25:8:6.9:75.9,6.9,0:0:25:-75.92:75.92\n3\t13640772\t154020:2\tA\t]3:13639803]A\t75\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=154020:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=3:13639803(+)-3:13640772(-)__3_13622001_13647001D;SPAN=969;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:25:8:6.9:75.9,6.9,0:0:25:-75.92:75.92\n3\t15230578\t154422:1\tG\t]3:15359990]G\t41\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;MAPQ=60;MATEID=154422:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_15214501_15239501_5C;SPAN=129412;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:15:29:31.4:41.3,0,31.4:10:10:-41.43:41.43\n3\t15359990\t154422:2\tT\tT[3:15230578[\t41\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;MAPQ=60;MATEID=154422:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_15214501_15239501_5C;SPAN=129412;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:15:29:31.4:41.3,0,31.4:10:10:-41.43:41.43\n3\t17060242\t154851:1\tC\t]3:17080219]C\t37\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=154851:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=3:17060242(-)-3:17080219(+)__3_17076501_17101501D;SPAN=19977;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:21:14:37.1,0,14:0:13:-37.47:37.47\n3\t17080219\t154851:2\tG\tG[3:17060242[\t37\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=154851:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=3:17060242(-)-3:17080219(+)__3_17076501_17101501D;SPAN=19977;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:21:14:37.1,0,14:0:13:-37.47:37.47\n3\t20552852\t155688:1\tC\tC[3:20553073[\t2\tPASS\tEVDNC=ASSMB;HOMSEQ=GCCAGGCAGTGGGAGCAGGCACTTC;MAPQ=60;MATEID=155688:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_20531001_20556001_2C;SPAN=221;SUBN=1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:4:39:2.3:2.3,0,94.7:4:0:-2.241:7.735\n3\t20553073\t155688:2\tG\t]3:20552852]G\t2\tPASS\tEVDNC=ASSMB;HOMSEQ=GCCAGGCAGTGGGAGCAGGCACTTC;MAPQ=60;MATEID=155688:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_20531001_20556001_2C;SPAN=221;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:4:39:2.3:2.3,0,94.7:4:0:-2.241:7.735\n3\t21370237\t155889:1\tA\t]3:21373497]A\t17\tPASS\tEVDNC=ASSMB;INSERTION=ATAAATGTTCTCCAATTTCTAC;MAPQ=60;MATEID=155889:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_21364001_21389001_12C;SPAN=3260;SUBN=5;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:45:17:17,0,96.2:9:0:-17.06:20.24\n3\t21373497\t155889:2\tC\tC[3:21370237[\t17\tPASS\tEVDNC=ASSMB;INSERTION=ATAAATGTTCTCCAATTTCTAC;MAPQ=60;MATEID=155889:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_21364001_21389001_12C;SPAN=3260;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:45:17:17,0,96.2:9:0:-17.06:20.24\n3\t21682213\t155995:1\tT\tT[3:21684475[\t99\tPASS\tEVDNC=ASSMB;INSERTION=CTCTCTCTCTCTCTCTCTCTCTCC;MAPQ=60;MATEID=155995:2;MATENM=3;NM=9;NUMPARTS=2;SCTG=c_3_21658001_21683001_0C;SPAN=2262;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:34:6:9.3:102.3,9.3,0:34:0:-102.3:102.3\n3\t21684475\t155995:2\tC\t]3:21682213]C\t99\tPASS\tEVDNC=ASSMB;INSERTION=CTCTCTCTCTCTCTCTCTCTCTCC;MAPQ=60;MATEID=155995:1;MATENM=9;NM=3;NUMPARTS=2;SCTG=c_3_21658001_21683001_0C;SPAN=2262;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:34:6:9.3:102.3,9.3,0:34:0:-102.3:102.3\n3\t22050869\t156124:1\tG\tG[3:22056304[\t99\tPASS\tEVDNC=ASSMB;HOMSEQ=AAAAATTCAATGTG;MAPQ=60;MATEID=156124:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_3_22050001_22075001_1C;SPAN=5435;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:35:35:9.6:105.6,9.6,0:35:0:-105.6:105.6\n3\t22056304\t156124:2\tA\t]3:22050869]A\t99\tPASS\tEVDNC=ASSMB;HOMSEQ=AAAAATTCAATGTG;MAPQ=60;MATEID=156124:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_3_22050001_22075001_1C;SPAN=5435;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:35:35:9.6:105.6,9.6,0:35:0:-105.6:105.6\n3\t23466045\t167961:1\tT\tT[3:73822008[\t14\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AGAT;MAPQ=60;MATEID=167961:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_73818501_73843501_134C;SPAN=50355963;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:6:19:14.6:14.6,0,31.1:5:5:-14.47:14.88\n3\t26409479\t157128:1\tT\tT[3:26410808[\t92\tPASS\tEVDNC=ASSMB;HOMSEQ=T;MAPQ=60;MATEID=157128:2;MATENM=2;NM=3;NUMPARTS=2;SCTG=c_3_26386501_26411501_35C;SPAN=1329;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:30:15:8.4:92.4,8.4,0:30:0:-92.42:92.42\n3\t26410808\t157128:2\tT\t]3:26409479]T\t92\tPASS\tEVDNC=ASSMB;HOMSEQ=T;MAPQ=60;MATEID=157128:1;MATENM=3;NM=2;NUMPARTS=2;SCTG=c_3_26386501_26411501_35C;SPAN=1329;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:30:15:8.4:92.4,8.4,0:30:0:-92.42:92.42\n3\t28705934\t157608:1\tC\t[3:28772274[C\t31\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;MAPQ=60;MATEID=157608:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_28763001_2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RTS=2;SCTG=c_3_63504001_63529001_88C;SPAN=464684;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:51:88:77.6:143.6,0,77.6:36:34:-144.7:144.7\n3\t63528112\t165000:2\tC\tC[3:62858227[\t62\tPASS\tEVDNC=ASSMB;HOMSEQ=CTC;MAPQ=60;MATEID=165000:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_3_63504001_63529001_97C;SPAN=669885;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:26:82:62.9:62.9,0,142.1:26:0:-62.78:64.53\n3\t63626756\t165075:2\tC\t]1:114690356]C\t50\tPASS\tEVDNC=ASSMB;INSERTION=CAAAAGC;MAPQ=60;MATEID=165075:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_63626501_63651501_4C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:22:81:50:50,0,152.3:22:0:-49.85:52.82\n3\t63718451\t810346:1\tT\t]17:60802106]T\t99\tPASS\tEVDNC=ASSMB;HOMSEQ=TTG;MAPQ=60;MATEID=810346:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_17_60784501_60809501_53C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:51:80:53.6:146,0,53.6:51:0:-148.1:148.1\n3\t63755964\t165192:1\tC\tC[3:63992058[\t99\tPASS\tEVDNC=ASSMB;HOMSEQ=C;MAPQ=60;MATEID=165192:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_63969501_63994501_3C;SPAN=236094;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:56:119:99:151.4,0,148.1:56:0:-151.4:151.4\n3\t63948014\t165185:2\tG\tG[1:106192958[\t99\tPASS\tEVDNC=ASSMB;HOMSEQ=AG;MAPQ=60;MATEID=165185:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_63945001_63970001_2C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:49:53:14.7:161.7,14.7,0:49:0:-160.5:160.5\n3\t63976823\t809737:1\tA\t]17:58731201]A\t38\tPASS\tEVDNC=ASSMB;HOMSEQ=ACCT;MAPQ=60;MATEID=809737:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_17_58726501_58751501_107C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:19:88:38:38,0,183.2:19:0:-37.98:43.43\n3\t63992058\t165192:2\tC\t]3:63755964]C\t99\tPASS\tEVDNC=ASSMB;HOMSEQ=C;MAPQ=60;MATEID=165192:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_63969501_63994501_3C;SPAN=236094;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:56:119:99:151.4,0,148.1:56:0:-151.4:151.4\n3\t64698562\t27426:2\tT\t]1:113801494]T\t25\tPASS\tEVDNC=ASSMB;HOMSEQ=T;MAPQ=60;MATEID=27426:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_1_113778001_113803001_22C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:50:25.7:25.7,0,98.3:12:0:-25.56:28.06\n3\t66074255\t165649:1\tC\t]3:66074906]C\t84\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=CCAGGCGCAGTGGCTCATGCCTGTAATCCCAGCACTTTGGGAGGC;MAPQ=60;MATEID=165649:2;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_3_66052001_66077001_132C;SPAN=651;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:29:39:12.2:84.8,0,12.2:16:21:-87.73:87.73\n3\t66074906\t165649:2\tC\tC[3:66074255[\t84\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=CCAGGCGCAGTGGCTCATGCCTGTAATCCCAGCACTTTGGGAGGC;MAPQ=60;MATEID=165649:1;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_3_66052001_66077001_132C;SPAN=651;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:29:39:12.2:84.8,0,12.2:16:21:-87.73:87.73\n3\t66713349\t165844:1\tG\t]3:66713486]G\t29\tPASS\tEVDNC=ASSMB;HOMSEQ=G;MAPQ=60;MATEID=165844:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_66689001_66714001_52C;SPAN=137;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:35:29.9:29.9,0,56.3:12:0:-29.77:30.28\n3\t66713486\t165844:2\tG\tG[3:66713349[\t29\tPASS\tEVDNC=ASSMB;HOMSEQ=G;MAPQ=60;MATEID=165844:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_66689001_66714001_52C;SPAN=137;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:35:29.9:29.9,0,56.3:12:0:-29.77:30.28\n3\t67443400\t166105:1\tC\tC[3:67446375[\t36\tPASS\tDISC_MAPQ=58;EVDNC=DSCRD;IMPRECISE;MAPQ=58;MATEID=166105:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=3:67443400(+)-3:67446375(-)__3_67424001_67449001D;SPAN=2975;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:11:12:3.3:36.3,3.3,0:0:11:-35.86:35.86\n3\t67446375\t166105:2\tA\t]3:67443400]A\t36\tPASS\tDISC_MAPQ=48;EVDNC=DSCRD;IMPRECISE;MAPQ=48;MATEID=166105:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=3:67443400(+)-3:67446375(-)__3_67424001_67449001D;SPAN=2975;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:11:12:3.3:36.3,3.3,0:0:11:-35.86:35.86\n3\t67849380\t166213:1\tA\tA[3:67851162[\t23\tPASS\tEVDNC=ASSMB;HOMSEQ=TTA;MAPQ=60;MATEID=166213:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_67840501_67865501_21C;SPAN=1782;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:22:23.6:23.6,0,30.2:9:0:-23.53:23.59\n3\t67851162\t166213:2\tT\t]3:67849380]T\t23\tPASS\tEVDNC=ASSMB;HOMSEQ=TTA;MAPQ=60;MATEID=166213:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_67840501_67865501_21C;SPAN=1782;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:22:23.6:23.6,0,30.2:9:0:-23.53:23.59\n3\t67959153\t166245:1\tA\tA[3:67960425[\t59\tPASS\tEVDNC=ASSMB;HOMSEQ=CAA;MAPQ=60;MATEID=166245:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_67938501_67963501_55C;SPAN=1272;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:20:20:5.4:59.4,5.4,0:20:0:-59.41:59.41\n3\t67960425\t166245:2\tC\t]3:67959153]C\t59\tPASS\tEVDNC=ASSMB;HOMSEQ=CAA;MAPQ=60;MATEID=166245:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_67938501_67963501_55C;SPAN=1272;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:20:20:5.4:59.4,5.4,0:20:0:-59.41:59.41\n3\t68585622\t166416:1\tT\tT[3:68591103[\t18\tPASS\tEVDNC=ASSMB;HOMSEQ=ACT;MAPQ=60;MATEID=166416:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_68575501_68600501_24C;SPAN=5481;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:29:18.2:18.2,0,54.5:8:0:-18.26:19.27\n3\t68591103\t166416:2\tA\t]3:68585622]A\t18\tPASS\tEVDNC=ASSMB;HOMSEQ=ACT;MAPQ=60;MATEID=166416:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_68575501_68600501_24C;SPAN=5481;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:29:18.2:18.2,0,54.5:8:0:-18.26:19.27\n3\t68841064\t166474:1\tA\tA[3:68841345[\t27\tPASS\tEVDNC=ASSMB;HOMSEQ=AATAAAATCCA;MAPQ=60;MATEID=166474:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_68820501_68845501_187C;SPAN=281;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:19:17.9:27.8,0,17.9:10:0:-27.73:27.73\n3\t68841345\t166474:2\tA\t]3:68841064]A\t27\tPASS\tEVDNC=ASSMB;HOMSEQ=AATAAAATCCA;MAPQ=60;MATEID=166474:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_68820501_68845501_187C;SPAN=281;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:19:17.9:27.8,0,17.9:10:0:-27.73:27.73\n3\t70894164\t167013:1\tT\tT[3:70894499[\t99\tPASS\tDISC_MAPQ=42;EVDNC=ASDIS;INSERTION=GGT;MAPQ=60;MATEID=167013:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_70878501_70903501_21C;SPAN=335;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:33:5:9:99,9,0:27:8:-99.02:99.02\n3\t70894499\t167013:2\tT\t]3:70894164]T\t99\tPASS\tDISC_MAPQ=31;EVDNC=ASDIS;INSERTION=GGT;MAPQ=60;MATEID=167013:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_70878501_70903501_21C;SPAN=335;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:33:5:9:99,9,0:27:8:-99.02:99.02\n3\t72330575\t167459:1\tA\tA[3:72330856[\t52\tPASS\tEVDNC=ASSMB;HOMSEQ=AAAAACGAAGACAGTA;MAPQ=60;MATEID=167459:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_72324001_72349001_32C;SPAN=281;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:18:26:12.5:52.1,0,12.5:18:0:-53.39:53.39\n3\t72330856\t167459:2\tA\t]3:72330575]A\t52\tPASS\tEVDNC=ASSMB;HOMSEQ=AAAAACGAAGACAGTA;MAPQ=60;MATEID=167459:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_72324001_72349001_32C;SPAN=281;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:18:26:12.5:52.1,0,12.5:18:0:-53.39:53.39\n3\t73013926\t167710:1\tC\tC[3:73014404[\t43\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;MAPQ=60;MATEID=167710:2;MATENM=0;NM=3;NUMPARTS=2;SCTG=c_3_73010001_73035001_71C;SPAN=478;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:15:21:7.4:43.7,0,7.4:5:10:-44.87:44.87\n3\t73014404\t167710:2\tG\t]3:73013926]G\t43\tPASS\tDISC_MAPQ=59;EVDNC=ASDIS;MAPQ=60;MATEID=167710:1;MATENM=3;NM=0;NUMPARTS=2;SCTG=c_3_73010001_73035001_71C;SPAN=478;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:15:21:7.4:43.7,0,7.4:5:10:-44.87:44.87\n3\t73822008\t167961:2\tA\t]3:23466045]A\t14\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AGAT;MAPQ=60;MATEID=167961:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_73818501_73843501_134C;SPAN=50355963;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:6:19:14.6:14.6,0,31.1:5:5:-14.47:14.88\n3\t74716275\t168219:1\tT\tT[3:74716585[\t46\tPASS\tEVDNC=ASSMB;HOMSEQ=TAAAGTTATTTTCT;MAPQ=60;MATEID=168219:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_74700501_74725501_73C;SPAN=310;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:16:24:13.1:46.1,0,13.1:16:0:-46.99:46.99\n3\t74716585\t168219:2\tT\t]3:74716275]T\t46\tPASS\tEVDNC=ASSMB;HOMSEQ=TAAAGTTATTTTCT;MAPQ=60;MATEID=168219:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_74700501_74725501_73C;SPAN=310;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:16:24:13.1:46.1,0,13.1:16:0:-46.99:46.99\n3\t75414219\t189909:1\tT\tT[3:130080581[\t49\tPASS\tDISC_MAPQ=49;EVDNC=DSCRD;IMPRECISE;MAPQ=49;MATEID=189909:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=3:75414219(+)-3:130080581(-)__3_130070501_130095501D;SPAN=54666362;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:17:7:4.5:49.5,4.5,0:0:17:-49.51:49.51\n3\t75414274\t378752:1\tT\t]7:6923050]T\t30\tPASS\tDISC_MAPQ=46;EVDNC=DSCRD;IMPRECISE;MAPQ=46;MATEID=378752:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=3:75414274(-)-7:6923050(+)__7_6909001_6934001D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:20:17.6:30.8,0,17.6:0:11:-30.82:30.82\n3\t75662822\t872855:1\tA\tA]20:29418432]\t23\tPASS\tDISC_MAPQ=43;EVDNC=DSCRD;IMPRECISE;MAPQ=43;MATEID=872855:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=3:75662822(+)-20:29418432(+)__20_29400001_29425001D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:23:23.3:23.3,0,33.2:0:9:-23.24:23.37\n3\t75668011\t168580:1\tA\tA]20:29412524]\t37\tPASS\tDISC_MAPQ=30;EVDNC=DSCRD;IMPRECISE;MAPQ=30;MATEID=168580:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=3:75668011(+)-20:29412524(+)__3_75656001_75681001D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:15:44:37.1:37.1,0,73.4:0:15:-37.15:37.81\n3\t75673010\t872869:1\tA\t[20:29407505[A\t33\tPASS\tDISC_MAPQ=45;EVDNC=DSCRD;IMPRECISE;MAPQ=45;MATEID=872869:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=3:75673010(-)-20:29407505(-)__20_29400001_29425001D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:45:33.5:33.5,0,79.7:0:14:-33.57:34.6\n3\t75703640\t168761:1\tT\t[20:29375944[T\t66\tPASS\tDISC_MAPQ=34;EVDNC=DSCRD;IMPRECISE;MAPQ=34;MATEID=168761:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=3:75703640(-)-20:29375944(-)__3_75680501_75705501D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:22:26:0.6:66,0.6,0:0:22:-69.34:69.34\n3\t80013716\t170496:1\tA\tA]3:80016128]\t36\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;INSERTION=TA;MAPQ=60;MATEID=170496:2;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_3_79992501_80017501_19C;SPAN=2412;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:22:17:36.8,0,17:9:4:-37.05:37.05\n3\t80015320\t170497:1\tA\t[3:80015952[A\t45\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AGTTG;MAPQ=60;MATEID=170497:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_3_79992501_80017501_23C;SPAN=632;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:16:26:19.1:45.5,0,19.1:15:6:-46.05:46.05\n3\t80015952\t170497:2\tC\t[3:80015320[C\t45\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AGTTG;MAPQ=60;MATEID=170497:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_3_79992501_80017501_23C;SPAN=632;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:16:26:19.1:45.5,0,19.1:15:6:-46.05:46.05\n3\t80016128\t170496:2\tA\tA]3:80013716]\t36\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;INSERTION=TA;MAPQ=60;MATEID=170496:1;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_3_79992501_80017501_19C;SPAN=2412;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:22:17:36.8,0,17:9:4:-37.05:37.05\n3\t80876163\t170815:1\tT\tT[3:80877454[\t95\tPASS\tEVDNC=ASSMB;HOMSEQ=TTT;MAPQ=60;MATEID=170815:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_80874501_80899501_60C;SPAN=1291;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:31:36:3.3:95.7,3.3,0:31:0:-98.33:98.33\n3\t80877454\t170815:2\tT\t]3:80876163]T\t95\tPASS\tEVDNC=ASSMB;HOMSEQ=TTT;MAPQ=60;MATEID=170815:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_80874501_80899501_60C;SPAN=1291;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:31:36:3.3:95.7,3.3,0:31:0:-98.33:98.33\n3\t81296931\t170944:1\tG\tG[3:81297230[\t13\tPASS\tEVDNC=ASSMB;HOMSEQ=AAAAATGAGTACCTGTG;MAPQ=60;MATEID=170944:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_81291001_81316001_36C;SPAN=299;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:6:22:13.7:13.7,0,40.1:6:0:-13.62:14.42\n3\t81297230\t170944:2\tA\t]3:81296931]A\t13\tPASS\tEVDNC=ASSMB;HOMSEQ=AAAAATGAGTACCTGTG;MAPQ=60;MATEID=170944:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_81291001_81316001_36C;SPAN=299;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:6:22:13.7:13.7,0,40.1:6:0:-13.62:14.42\n3\t81858356\t171075:1\tC\tC[3:81858662[\t99\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AAAAACTGGTAAACC;MAPQ=60;MATEID=171075:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_81854501_81879501_38C;SPAN=306;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:35:20:9.6:105.6,9.6,0:27:11:-105.6:105.6\n3\t81858662\t171075:2\tA\t]3:81858356]A\t99\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AAAAACTGGTAAACC;MAPQ=60;MATEID=171075:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_81854501_81879501_38C;SPAN=306;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:35:20:9.6:105.6,9.6,0:27:11:-105.6:105.6\n3\t83803977\t171677:1\tT\tT[3:83806199[\t89\tPASS\tEVDNC=ASSMB;HOMSEQ=TATATGGCCTTTT;MAPQ=60;MATEID=171677:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_83790001_83815001_51C;SPAN=2222;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:29:20:8.1:89.1,8.1,0:29:0:-89.12:89.12\n3\t83806199\t171677:2\tT\t]3:83803977]T\t89\tPASS\tEVDNC=ASSMB;HOMSEQ=TATATGGCCTTTT;MAPQ=60;MATEID=171677:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_83790001_83815001_51C;SPAN=2222;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:29:20:8.1:89.1,8.1,0:29:0:-89.12:89.12\n3\t84055791\t171778:1\tC\tC[3:84058234[\t23\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;MAPQ=60;MATEID=171778:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_84035001_84060001_31C;SPAN=2443;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:22:23.6:23.6,0,30.2:8:2:-23.53:23.59\n3\t84058234\t171778:2\tA\t]3:84055791]A\t23\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;MAPQ=60;MATEID=171778:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_84035001_84060001_31C;SPAN=2443;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:22:23.6:23.6,0,30.2:8:2:-23.53:23.59\n3\t88404582\t173339:1\tT\tT[3:88404859[\t66\tPASS\tEVDNC=ASSMB;HOMSEQ=CT;MAPQ=60;MATEID=173339:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_88396001_88421001_37C;SPAN=277;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:22:21:6:66,6,0:22:0:-66.02:66.02\n3\t88404859\t173339:2\tC\t]3:88404582]C\t66\tPASS\tEVDNC=ASSMB;HOMSEQ=CT;MAPQ=60;MATEID=173339:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_88396001_88421001_37C;SPAN=277;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:22:21:6:66,6,0:22:0:-66.02:66.02\n3\t89460367\t398109:1\tT\t]7:62334070]T\t44\tPASS\tDISC_MAPQ=35;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=398109:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_62328001_62353001_253C;SPAN=-1;SUBN=4;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:15:20:4.4:44,0,4.4:5:14:-45.49:45.49\n3\t90350671\t173897:1\tT\t]3:90351556]T\t21\tPASS\tDISC_MAPQ=53;EVDNC=ASDIS;HOMSEQ=TCCAAATATCCACTTGCAGATTTTACAAAAAG;MAPQ=39;MATEID=173897:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_90331501_90356501_118C;SPAN=885;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:31:21.2:21.2,0,54.2:2:8:-21:21.92\n3\t90351556\t173897:2\tG\tG[3:90350671[\t21\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TCCAAATATCCACTTGCAGATTTTACAAAAAG;MAPQ=60;MATEID=173897:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_90331501_90356501_118C;SPAN=885;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:31:21.2:21.2,0,54.2:2:8:-21:21.92\n3\t90402956\t173942:1\tA\t]3:90403683]A\t26\tPASS\tDISC_MAPQ=55;EVDNC=ASDIS;HOMSEQ=AAAGAAGTTTCTGAGAATGCTTCTGTCTAGTTTTTATGTG;MAPQ=60;MATEID=173942:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_90380501_90405501_95C;SPAN=727;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:47:26.6:26.6,0,89.3:8:6:-26.4:28.44\n3\t90403683\t173942:2\tG\tG[3:90402956[\t26\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AAAGAAGTTTCTGAGAATGCTTCTGTCTAGTTTTTATGTG;MAPQ=60;MATEID=173942:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_90380501_90405501_95C;SPAN=727;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:47:26.6:26.6,0,89.3:8:6:-26.4:28.44\n3\t90498706\t174243:1\tG\tG[3:90599779[\t17\tPASS\tDISC_MAPQ=53;EVDNC=DSCRD;IMPRECISE;MAPQ=53;MATEID=174243:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=3:90498706(+)-3:90599779(-)__3_90478501_90503501D;SPAN=101073;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:30:17.9:17.9,0,57.5:0:8:-17.98:19.13\n3\t90536612\t174785:1\tC\tC[3:90537933[\t21\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TTTCTGAGAATTCTTCTGTCTAGTTTTATATGAAGAAATC;MAPQ=60;MATEID=174785:2;MATENM=2;NM=1;NUMPARTS=2;SCTG=c_3_90527501_90552501_470C;SPAN=1321;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:78:21.2:21.2,0,173:8:6:-20.99:28.09\n3\t90537933\t174785:2\tT\t]3:90536612]T\t21\tPASS\tDISC_MAPQ=56;EVDNC=ASDIS;HOMSEQ=TTTCTGAGAATTCTTCTGTCTAGTTTTATATGAAGAAATC;MAPQ=60;MATEID=174785:1;MATENM=1;NM=2;NUMPARTS=2;SCTG=c_3_90527501_90552501_470C;SPAN=1321;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:78:21.2:21.2,0,173:8:6:-20.99:28.09\n3\t90599779\t174243:2\tT\t]3:90498706]T\t17\tPASS\tDISC_MAPQ=22;EVDNC=DSCRD;IMPRECISE;MAPQ=22;MATEID=174243:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=3:90498706(+)-3:90599779(-)__3_90478501_90503501D;SPAN=101073;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:30:17.9:17.9,0,57.5:0:8:-17.98:19.13\n3\t90785200\t177847:1\tA\tA[3:90900668[\t66\tPASS\tDISC_MAPQ=34;EVDNC=DSCRD;IMPRECISE;MAPQ=34;MATEID=177847:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=3:90785200(+)-3:90900668(-)__3_90895001_90920001D;SPAN=115468;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:22:8:6:66,6,0:0:22:-66.02:66.02\n3\t90793288\t177493:1\tA\t]3:90968900]A\t19\tPASS\tDISC_MAPQ=19;EVDNC=DSCRD;IMPRECISE;MAPQ=19;MATEID=177493:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=3:90793288(-)-3:90968900(+)__3_90772501_90797501D;SPAN=175612;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:48:19.7:19.7,0,98.9:0:10:-19.52:22.68\n3\t90832509\t177854:1\tT\t]3:90914890]T\t26\tPASS\tDISC_MAPQ=20;EVDNC=DSCRD;IMPRECISE;MAPQ=20;MATEID=177854:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=3:90832509(-)-3:90914890(+)__3_90895001_90920001D;SPAN=82381;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:9:8:2.4:26.4,2.4,0:0:9:-26.41:26.41\n3\t90863052\t178318:1\tT\tT[3:91078769[\t79\tPASS\tDISC_MAPQ=16;EVDNC=DSCRD;IMPRECISE;MAPQ=16;MATEID=178318:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=3:90863052(+)-3:91078769(-)__3_91066501_91091501D;SPAN=215717;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:26:31:1.8:79.2,1.8,0:0:26:-81.69:81.69\n3\t90871032\t178673:1\tA\tA[3:91221920[\t27\tPASS\tDISC_MAPQ=43;EVDNC=DSCRD;IMPRECISE;MAPQ=43;MATEID=178673:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=3:90871032(+)-3:91221920(-)__3_91213501_91238501D;SPAN=350888;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:20:20.9:27.5,0,20.9:0:10:-27.41:27.41\n3\t90900668\t177847:2\tC\t]3:90785200]C\t66\tPASS\tDISC_MAPQ=28;EVDNC=DSCRD;IMPRECISE;MAPQ=28;MATEID=177847:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=3:90785200(+)-3:90900668(-)__3_90895001_90920001D;SPAN=115468;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:22:8:6:66,6,0:0:22:-66.02:66.02\n3\t90914890\t177854:2\tC\tC[3:90832509[\t26\tPASS\tDISC_MAPQ=30;EVDNC=DSCRD;IMPRECISE;MAPQ=30;MATEID=177854:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=3:90832509(-)-3:90914890(+)__3_90895001_90920001D;SPAN=82381;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:9:8:2.4:26.4,2.4,0:0:9:-26.41:26.41\n3\t90925354\t177943:1\tT\t]3:91069782]T\t49\tPASS\tDISC_MAPQ=33;EVDNC=DSCRD;IMPRECISE;MAPQ=33;MATEID=177943:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=3:90925354(-)-3:91069782(+)__3_90919501_90944501D;SPAN=144428;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:17:4:4.5:49.5,4.5,0:0:17:-49.51:49.51\n3\t90968900\t177493:2\tT\tT[3:90793288[\t19\tPASS\tDISC_MAPQ=42;EVDNC=DSCRD;IMPRECISE;MAPQ=42;MATEID=177493:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=3:90793288(-)-3:90968900(+)__3_90772501_90797501D;SPAN=175612;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:48:19.7:19.7,0,98.9:0:10:-19.52:22.68\n3\t91069782\t177943:2\tA\tA[3:90925354[\t49\tPASS\tDISC_MAPQ=16;EVDNC=DSCRD;IMPRECISE;MAPQ=16;MATEID=177943:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=3:90925354(-)-3:91069782(+)__3_90919501_90944501D;SPAN=144428;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:17:4:4.5:49.5,4.5,0:0:17:-49.51:49.51\n3\t91078769\t178318:2\tT\t]3:90863052]T\t79\tPASS\tDISC_MAPQ=29;EVDNC=DSCRD;IMPRECISE;MAPQ=29;MATEID=178318:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=3:90863052(+)-3:91078769(-)__3_91066501_91091501D;SPAN=215717;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:26:31:1.8:79.2,1.8,0:0:26:-81.69:81.69\n3\t91221920\t178673:2\tC\t]3:90871032]C\t27\tPASS\tDISC_MAPQ=42;EVDNC=DSCRD;IMPRECISE;MAPQ=42;MATEID=178673:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=3:90871032(+)-3:91221920(-)__3_91213501_91238501D;SPAN=350888;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:20:20.9:27.5,0,20.9:0:10:-27.41:27.41\n3\t93736476\t179203:1\tG\t]3:93737280]G\t37\tPASS\tDISC_MAPQ=57;EVDNC=DSCRD;IMPRECISE;MAPQ=57;MATEID=179203:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=3:93736476(-)-3:93737280(+)__3_93737001_93762001D;SPAN=804;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:20:11:37.4,0,11:0:13:-37.93:37.93\n3\t93737280\t179203:2\tT\tT[3:93736476[\t37\tPASS\tDISC_MAPQ=40;EVDNC=DSCRD;IMPRECISE;MAPQ=40;MATEID=179203:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=3:93736476(-)-3:93737280(+)__3_93737001_93762001D;SPAN=804;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:20:11:37.4,0,11:0:13:-37.93:37.93\n3\t95397364\t179722:1\tT\tT[3:95397679[\t49\tPASS\tEVDNC=ASSMB;HOMSEQ=CCAACCTGACTTACTT;MAPQ=60;MATEID=179722:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_95378501_95403501_7C;SPAN=315;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:17:17:4.5:49.5,4.5,0:17:0:-49.51:49.51\n3\t95397679\t179722:2\tC\t]3:95397364]C\t49\tPASS\tEVDNC=ASSMB;HOMSEQ=CCAACCTGACTTACTT;MAPQ=60;MATEID=179722:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_95378501_95403501_7C;SPAN=315;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:17:17:4.5:49.5,4.5,0:17:0:-49.51:49.51\n3\t95746924\t179868:1\tG\tG[3:95751920[\t35\tPASS\tEVDNC=ASSMB;HOMSEQ=CAAG;MAPQ=60;MATEID=179868:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_95746001_95771001_73C;SPAN=4996;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:28:35:35,0,35:13:0:-35.04:35.04\n3\t95749273\t179871:1\tA\t]3:95752156]A\t85\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;INSERTION=TGCATAGGG;MAPQ=60;MATEID=179871:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_95746001_95771001_35C;SPAN=2883;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:28:26:7.8:85.8,7.8,0:23:10:-85.82:85.82\n3\t95751920\t179868:2\tC\t]3:95746924]C\t35\tPASS\tEVDNC=ASSMB;HOMSEQ=CAAG;MAPQ=60;MATEID=179868:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_95746001_95771001_73C;SPAN=4996;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:28:35:35,0,35:13:0:-35.04:35.04\n3\t95752156\t179871:2\tT\tT[3:95749273[\t85\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;INSERTION=TGCATAGGG;MAPQ=60;MATEID=179871:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_95746001_95771001_35C;SPAN=2883;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:28:26:7.8:85.8,7.8,0:23:10:-85.82:85.82\n3\t99180219\t180863:1\tT\tT[3:99183546[\t26\tPASS\tEVDNC=ASSMB;HOMSEQ=CTT;MAPQ=60;MATEID=180863:2;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_3_99176001_99201001_115C;SPAN=3327;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:34:26.9:26.9,0,56.6:11:0:-26.75:27.42\n3\t99183546\t180863:2\tC\t]3:99180219]C\t26\tPASS\tEVDNC=ASSMB;HOMSEQ=CTT;MAPQ=60;MATEID=180863:1;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_3_99176001_99201001_115C;SPAN=3327;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:34:26.9:26.9,0,56.6:11:0:-26.75:27.42\n3\t99909938\t181038:1\tT\tT[3:99910788[\t40\tPASS\tEVDNC=ASSMB;INSERTION=T;MAPQ=60;MATEID=181038:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_99886501_99911501_48C;SPAN=850;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:21:10.7:40.4,0,10.7:14:0:-41.11:41.11\n3\t99910788\t181038:2\tC\t]3:99909938]C\t40\tPASS\tEVDNC=ASSMB;INSERTION=T;MAPQ=60;MATEID=181038:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_99886501_99911501_48C;SPAN=850;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:21:10.7:40.4,0,10.7:14:0:-41.11:41.11\n3\t100066519\t181071:1\tT\tT[3:100066813[\t59\tPASS\tEVDNC=ASSMB;HOMSEQ=GGCTTTGCTTCTT;MAPQ=60;MATEID=181071:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_100058001_100083001_45C;SPAN=294;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:18:20:5.4:59.4,5.4,0:18:0:-58.15:58.15\n3\t100066813\t181071:2\tG\t]3:100066519]G\t59\tPASS\tEVDNC=ASSMB;HOMSEQ=GGCTTTGCTTCTT;MAPQ=60;MATEID=181071:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_100058001_100083001_45C;SPAN=294;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:18:20:5.4:59.4,5.4,0:18:0:-58.15:58.15\n3\t101428791\t181443:1\tG\tG[3:101431411[\t26\tPASS\tDISC_MAPQ=45;EVDNC=ASDIS;HOMSEQ=ATTG;MAPQ=60;MATEID=181443:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_101430001_101455001_8C;SPAN=2620;SUBN=5;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:9:8:2.4:26.4,2.4,0:9:5:-26.41:26.41\n3\t101431411\t181443:2\tA\t]3:101428791]A\t26\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=ATTG;MAPQ=60;MATEID=181443:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_101430001_101455001_8C;SPAN=2620;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:9:8:2.4:26.4,2.4,0:9:5:-26.41:26.41\n3\t101469536\t181461:1\tA\tA[3:101469849[\t25\tPASS\tDISC_MAPQ=49;EVDNC=ASDIS;HOMSEQ=AAAAGAACAGA;MAPQ=60;MATEID=181461:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_101454501_101479501_125C;SPAN=313;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:15:12.2:25.4,0,12.2:5:5:-25.74:25.74\n3\t101469849\t181461:2\tA\t]3:101469536]A\t25\tPASS\tDISC_MAPQ=30;EVDNC=ASDIS;HOMSEQ=AAAAGAACAGA;MAPQ=60;MATEID=181461:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_101454501_101479501_125C;SPAN=313;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:15:12.2:25.4,0,12.2:5:5:-25.74:25.74\n3\t102564943\t181797:1\tT\tT[3:102565269[\t16\tPASS\tEVDNC=ASSMB;HOMSEQ=ATTTCCTCTTCTT;MAPQ=60;MATEID=181797:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_102557001_102582001_6C;SPAN=326;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:7:24:16.4:16.4,0,42.8:7:0:-16.36:17.07\n3\t102565269\t181797:2\tA\t]3:102564943]A\t16\tPASS\tEVDNC=ASSMB;HOMSEQ=ATTTCCTCTTCTT;MAPQ=60;MATEID=181797:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_102557001_102582001_6C;SPAN=326;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:7:24:16.4:16.4,0,42.8:7:0:-16.36:17.07\n3\t103091520\t181926:1\tT\tT[3:103091820[\t62\tPASS\tEVDNC=ASSMB;HOMSEQ=TAGTTTTATTTTTCT;MAPQ=60;MATEID=181926:2;MATENM=2;NM=4;NUMPARTS=2;SCTG=c_3_103071501_103096501_29C;SPAN=300;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:20:23:3:62.7,3,0:20:0:-63.68:63.68\n3\t103091820\t181926:2\tT\t]3:103091520]T\t62\tPASS\tEVDNC=ASSMB;HOMSEQ=TAGTTTTATTTTTCT;MAPQ=60;MATEID=181926:1;MATENM=4;NM=2;NUMPARTS=2;SCTG=c_3_103071501_103096501_29C;SPAN=300;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:20:23:3:62.7,3,0:20:0:-63.68:63.68\n3\t103194123\t181974:1\tA\tA[3:103195276[\t35\tPASS\tEVDNC=ASSMB;HOMSEQ=TA;MAPQ=60;MATEID=181974:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_103194001_103219001_10C;SPAN=1153;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:25:26:35.9,0,26:13:0:-35.95:35.95\n3\t103195276\t181974:2\tT\t]3:103194123]T\t35\tPASS\tEVDNC=ASSMB;HOMSEQ=TA;MAPQ=60;MATEID=181974:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_103194001_103219001_10C;SPAN=1153;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:25:26:35.9,0,26:13:0:-35.95:35.95\n3\t103962954\t671890:1\tT\t]13:60886851]T\t33\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;INSERTION=T;MAPQ=60;MATEID=671890:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_13_60882501_60907501_30C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:11:9:3:33,3,0:9:4:-33.01:33.01\n3\t104229404\t182318:1\tT\tT[3:104240690[\t20\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=T;MAPQ=60;MATEID=182318:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_104223001_104248001_62C;SPAN=11286;SUBN=1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:20:20.9:20.9,0,27.5:2:7:-20.79:20.87\n3\t104240690\t182318:2\tT\t]3:104229404]T\t20\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=T;MAPQ=60;MATEID=182318:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_104223001_104248001_62C;SPAN=11286;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:20:20.9:20.9,0,27.5:2:7:-20.79:20.87\n3\t104559356\t182457:1\tA\tA[3:104560203[\t35\tPASS\tEVDNC=ASSMB;HOMSEQ=A;MAPQ=60;MATEID=182457:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_104541501_104566501_2C;SPAN=847;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:26:29:35.6,0,29:13:0:-35.63:35.63\n3\t104560203\t182457:2\tA\t]3:104559356]A\t35\tPASS\tEVDNC=ASSMB;HOMSEQ=A;MAPQ=60;MATEID=182457:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_104541501_104566501_2C;SPAN=847;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:26:29:35.6,0,29:13:0:-35.63:35.63\n3\t107017130\t183282:1\tG\tG[3:107017386[\t18\tPASS\tEVDNC=ASSMB;INSERTION=A;MAPQ=60;MATEID=183282:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_107016001_107041001_83C;SPAN=256;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:28:18.5:18.5,0,51.5:8:0:-18.54:19.42\n3\t107017386\t183282:2\tG\t]3:107017130]G\t18\tPASS\tEVDNC=ASSMB;INSERTION=A;MAPQ=60;MATEID=183282:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_107016001_107041001_83C;SPAN=256;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:28:18.5:18.5,0,51.5:8:0:-18.54:19.42\n3\t107319102\t183337:1\tG\tG[3:107321486[\t85\tPASS\tEVDNC=ASSMB;INSERTION=AAAAT;MAPQ=60;MATEID=183337:2;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_3_107310001_107335001_68C;SPAN=2384;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:28:21:7.8:85.8,7.8,0:28:0:-85.82:85.82\n3\t107321486\t183337:2\tG\t]3:107319102]G\t85\tPASS\tEVDNC=ASSMB;INSERTION=AAAAT;MAPQ=60;MATEID=183337:1;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_3_107310001_107335001_68C;SPAN=2384;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:28:21:7.8:85.8,7.8,0:28:0:-85.82:85.82\n3\t108262809\t183955:1\tA\t[3:109509118[A\t20\tPASS\tDISC_MAPQ=20;EVDNC=DSCRD;IMPRECISE;MAPQ=20;MATEID=183955:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=3:108262809(-)-3:109509118(-)__3_109490501_109515501D;SPAN=1246309;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:22:20.3:20.3,0,33.5:0:8:-20.22:20.45\n3\t108561275\t183679:1\tG\t]3:108624761]G\t52\tPASS\tEVDNC=ASSMB;HOMSEQ=GG;MAPQ=60;MATEID=183679:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_108608501_108633501_41C;SPAN=63486;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:18:17:4.8:52.8,4.8,0:18:0:-52.81:52.81\n3\t108571285\t183658:1\tA\t]3:108599231]A\t41\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AT;MAPQ=60;MATEID=183658:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_3_108559501_108584501_45C;SPAN=27946;SUBN=1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:15:28:28.4:41.6,0,28.4:9:8:-41.77:41.77\n3\t108599231\t183658:2\tT\tT[3:108571285[\t41\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AT;MAPQ=60;MATEID=183658:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_3_108559501_108584501_45C;SPAN=27946;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:15:28:28.4:41.6,0,28.4:9:8:-41.77:41.77\n3\t108624761\t183679:2\tG\tG[3:108561275[\t52\tPASS\tEVDNC=ASSMB;HOMSEQ=GG;MAPQ=60;MATEID=183679:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_108608501_108633501_41C;SPAN=63486;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:18:17:4.8:52.8,4.8,0:18:0:-52.81:52.81\n3\t109509118\t183955:2\tT\t[3:108262809[T\t20\tPASS\tDISC_MAPQ=29;EVDNC=DSCRD;IMPRECISE;MAPQ=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3_125195001_125220001_17C;SPAN=869;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:17:2:38.3,0,2:13:0:-39.65:39.65\n3\t125218320\t188523:2\tG\t]3:125217451]G\t38\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=188523:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_125195001_125220001_17C;SPAN=869;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:17:2:38.3,0,2:13:0:-39.65:39.65\n3\t125720746\t188658:1\tG\t]3:125743434]G\t26\tPASS\tDISC_MAPQ=26;EVDNC=DSCRD;IMPRECISE;MAPQ=26;MATEID=188658:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=3:125720746(-)-3:125743434(+)__3_125709501_125734501D;SPAN=22688;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:9:7:2.4:26.4,2.4,0:0:9:-26.41:26.41\n3\t125743434\t188658:2\tA\tA[3:125720746[\t26\tPASS\tDISC_MAPQ=40;EVDNC=DSCRD;IMPRECISE;MAPQ=40;MATEID=188658:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=3:125720746(-)-3:125743434(+)__3_125709501_125734501D;SPAN=22688;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:9:7:2.4:26.4,2.4,0:0:9:-26.41:26.41\n3\t126640095\t189005:1\tT\tT[3:126640407[\t35\tPASS\tEVDNC=ASSMB;HOMSEQ=GCTGCTTGTGTTTTCT;MAPQ=60;MATEID=189005:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_126616001_126641001_28C;SPAN=312;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:26:29:35.6,0,29:13:0:-35.63:35.63\n3\t126640407\t189005:2\tG\t]3:126640095]G\t35\tPASS\tEVDNC=ASSMB;HOMSEQ=GCTGCTTGTGTTTTCT;MAPQ=60;MATEID=189005:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_126616001_126641001_28C;SPAN=312;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:26:29:35.6,0,29:13:0:-35.63:35.63\n3\t128140300\t987204:1\tC\t]Un_KN707627v1_decoy:5821]C\t56\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=987204:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_478_1_5821_13C;SPAN=-1;SUBN=7;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:19:5:5.1:56.1,5.1,0:19:0:-56.11:56.11\n3\t128657391\t611288:1\tC\t[11:129051675[C\t17\tPASS\tDISC_MAPQ=255;EVDNC=ASDIS;HOMSEQ=GGCTGGG;MAPQ=60;MATEID=611288:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_11_129041501_129066501_11C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:7:19:17.9:17.9,0,27.8:4:3:-17.77:17.94\n3\t130044539\t189911:1\tC\tC[3:130087903[\t72\tPASS\tEVDNC=ASSMB;HOMSEQ=AC;MAPQ=60;MATEID=189911:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_130070501_130095501_18C;SPAN=43364;SUBN=2;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:24:21:6.6:72.6,6.6,0:24:0:-72.62:72.62\n3\t130080581\t189909:2\tC\t]3:75414219]C\t49\tPASS\tDISC_MAPQ=20;EVDNC=DSCRD;IMPRECISE;MAPQ=20;MATEID=189909:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=3:75414219(+)-3:130080581(-)__3_130070501_130095501D;SPAN=54666362;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:17:7:4.5:49.5,4.5,0:0:17:-49.51:49.51\n3\t130087903\t189911:2\tA\t]3:130044539]A\t72\tPASS\tEVDNC=ASSMB;HOMSEQ=AC;MAPQ=60;MATEID=189911:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_130070501_130095501_18C;SPAN=43364;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:24:21:6.6:72.6,6.6,0:24:0:-72.62:72.62\n3\t130167162\t189995:1\tT\tT[12:8307812[\t23\tPASS\tDISC_MAPQ=27;EVDNC=DSCRD;IMPRECISE;MAPQ=27;MATEID=189995:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=3:130167162(+)-12:8307812(-)__3_130144001_130169001D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:8:5:2.1:23.1,2.1,0:0:8:-23.11:23.11\n3\t130167390\t614848:1\tC\t]12:8308047]C\t22\tPASS\tDISC_MAPQ=47;EVDNC=DSCRD;IMPRECISE;MAPQ=47;MATEID=614848:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=3:130167390(-)-12:8308047(+)__12_8305501_8330501D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:14:12.5:22.4,0,12.5:0:8:-22.62:22.62\n3\t131958971\t190506:1\tT\tT[3:131959300[\t29\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=GATACACCTTTCT;MAPQ=60;MATEID=190506:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_131957001_131982001_39C;SPAN=329;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:59:29.6:29.6,0,118.7:11:6:-29.63:32.66\n3\t131959300\t190506:2\tG\t]3:131958971]G\t29\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=GATACACCTTTCT;MAPQ=60;MATEID=190506:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_131957001_131982001_39C;SPAN=329;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:59:29.6:29.6,0,118.7:11:6:-29.63:32.66\n3\t131989409\t190518:1\tT\tT[3:131994541[\t62\tPASS\tDISC_MAPQ=255;EVDNC=TSI_G;HOMSEQ=TG;INSERTION=TCTCATATCTGTTTTCCTGGTAGAATACAGCACCATGAGGGTAGGACTCT;MAPQ=60;MATEID=190518:2;MATENM=1;NM=0;NUMPARTS=3;SCTG=c_3_131981501_132006501_77C;SPAN=5132;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:21:21:5.7:62.7,5.7,0:21:0:-62.72:62.72\n3\t131989515\t190519:1\tC\t[3:131994541[C\t59\tPASS\tDISC_MAPQ=60;EVDNC=TSI_L;HOMSEQ=TG;MAPQ=60;MATEID=190519:2;MATENM=1;NM=0;NUMPARTS=3;SCTG=c_3_131981501_132006501_77C;SPAN=5026;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:19:20:5.4:59.4,5.4,0:17:7:-59.41:59.41\n3\t131994541\t190518:2\tT\t]3:131989409]T\t62\tPASS\tDISC_MAPQ=255;EVDNC=TSI_G;HOMSEQ=TG;INSERTION=TCTCATATCTGTTTTCCTGGTAGAATACAGCACCATGAGGGTAGGACTCT;MAPQ=60;MATEID=190518:1;MATENM=0;NM=1;NUMPARTS=3;SCTG=c_3_131981501_132006501_77C;SPAN=5132;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:21:21:5.7:62.7,5.7,0:21:0:-62.72:62.72\n3\t131994541\t190519:2\tT\t[3:131989515[T\t59\tPASS\tDISC_MAPQ=60;EVDNC=TSI_L;HOMSEQ=TG;MAPQ=60;MATEID=190519:1;MATENM=0;NM=1;NUMPARTS=3;SCTG=c_3_131981501_132006501_77C;SPAN=5026;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:19:20:5.4:59.4,5.4,0:17:7:-59.41:59.41\n3\t132270290\t190645:1\tG\tG[3:132276206[\t29\tPASS\tDISC_MAPQ=57;EVDNC=DSCRD;IMPRECISE;MAPQ=57;MATEID=190645:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=3:132270290(+)-3:132276206(-)__3_132275501_132300501D;SPAN=5916;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:10:4:2.7:29.7,2.7,0:0:10:-29.71:29.71\n3\t132276206\t190645:2\tA\t]3:132270290]A\t29\tPASS\tDISC_MAPQ=59;EVDNC=DSCRD;IMPRECISE;MAPQ=59;MATEID=190645:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=3:132270290(+)-3:132276206(-)__3_132275501_132300501D;SPAN=5916;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:10:4:2.7:29.7,2.7,0:0:10:-29.71:29.71\n3\t133884925\t191035:1\tA\t]3:133885105]A\t8\tPASS\tEVDNC=ASSMB;HOMSEQ=ACCAGAGGATGGGGGACTCACACACC;MAPQ=60;MATEID=191035:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_3_133868001_133893001_0C;SPAN=180;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:5:30:8:8,0,67.4:5:0:-8.072:10.8\n3\t133885105\t191035:2\tC\tC[3:133884925[\t8\tPASS\tEVDNC=ASSMB;HOMSEQ=ACCAGAGGATGGGGGACTCACACACC;MAPQ=60;MATEID=191035:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_3_133868001_133893001_0C;SPAN=180;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:5:30:8:8,0,67.4:5:0:-8.072:10.8\n3\t136302171\t191628:1\tC\tC[3:136307358[\t79\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;INSERTION=A;MAPQ=60;MATEID=191628:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_3_136293501_136318501_36C;SPAN=5187;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:26:19:7.2:79.2,7.2,0:17:19:-79.22:79.22\n3\t136307358\t191628:2\tT\t]3:136302171]T\t79\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;INSERTION=A;MAPQ=60;MATEID=191628:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_3_136293501_136318501_36C;SPAN=5187;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:26:19:7.2:79.2,7.2,0:17:19:-79.22:79.22\n3\t137595612\t192027:1\tT\tT[3:137597601[\t59\tPASS\tEVDNC=ASSMB;INSERTION=TATCTCTGCGCC;MAPQ=60;MATEID=192027:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_137592001_137617001_25C;SPAN=1989;SUBN=1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:20:20:5.4:59.4,5.4,0:20:0:-59.41:59.41\n3\t137597601\t192027:2\tC\t]3:137595612]C\t59\tPASS\tEVDNC=ASSMB;INSERTION=TATCTCTGCGCC;MAPQ=60;MATEID=192027:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_137592001_137617001_25C;SPAN=1989;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:20:20:5.4:59.4,5.4,0:20:0:-59.41:59.41\n3\t139885156\t234286:1\tA\tA]4:65936763]\t75\tPASS\tDISC_MAPQ=9;EVDNC=ASDIS;INSERTION=GG;MAPQ=31;MATEID=234286:2;MATENM=0;NM=12;NUMPARTS=2;SCTG=c_4_65929501_65954501_2C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:25:7:6.9:75.9,6.9,0:21:4:-75.92:75.92\n3\t140825566\t192860:1\tT\tT[3:140828201[\t31\tPASS\tEVDNC=ASSMB;HOMSEQ=CCACT;MAPQ=60;MATEID=192860:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_140826001_140851001_38C;SPAN=2635;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:17:8.6:31.7,0,8.6:11:0:-32.06:32.06\n3\t140828201\t192860:2\tC\t]3:140825566]C\t31\tPASS\tEVDNC=ASSMB;HOMSEQ=CCACT;MAPQ=60;MATEID=192860:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_140826001_140851001_38C;SPAN=2635;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:17:8.6:31.7,0,8.6:11:0:-32.06:32.06\n3\t144071898\t193746:1\tT\t]3:144089433]T\t41\tPASS\tDISC_MAPQ=58;EVDNC=ASDIS;HOMSEQ=T;MAPQ=60;MATEID=193746:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_144084501_144109501_46C;SPAN=17535;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:18:1.7:41.3,0,1.7:8:8:-42.92:42.92\n3\t144089433\t193746:2\tT\tT[3:144071898[\t41\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=T;MAPQ=60;MATEID=193746:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_144084501_144109501_46C;SPAN=17535;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:18:1.7:41.3,0,1.7:8:8:-42.92:42.92\n3\t146015409\t194390:1\tC\t]3:146015560]C\t34\tPASS\tEVDNC=ASSMB;HOMSEQ=CCT;MAPQ=60;MATEID=194390:2;MATENM=2;NM=1;NUMPARTS=2;SCTG=c_3_145995501_146020501_107C;SPAN=151;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:42:34.4:34.4,0,70.7:14:0:-34.41:35.12\n3\t146015560\t194390:2\tT\tT[3:146015409[\t34\tPASS\tEVDNC=ASSMB;HOMSEQ=CCT;MAPQ=60;MATEID=194390:1;MATENM=1;NM=2;NUMPARTS=2;SCTG=c_3_145995501_146020501_107C;SPAN=151;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:42:34.4:34.4,0,70.7:14:0:-34.41:35.12\n3\t146088175\t203693:1\tC\t]3:172347176]C\t25\tPASS\tEVDNC=ASSMB;HOMSEQ=CAGT;MAPQ=60;MATEID=203693:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_172333001_172358001_99C;SPAN=26259001;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:27:25.4:25.4,0,41.9:10:0:-25.42:25.66\n3\t146667403\t194657:1\tA\tA[3:146677075[\t65\tPASS\tEVDNC=ASSMB;HOMSEQ=CA;MAPQ=60;MATEID=194657:2;MATENM=3;NM=3;NUMPARTS=2;SCTG=c_3_146657001_146682001_118C;SPAN=9672;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:23:36:23:65.9,0,23:23:0:-66.82:66.82\n3\t146672618\t194660:1\tA\t]3:146677378]A\t99\tPASS\tEVDNC=ASSMB;INSERTION=ATTGGGGAG;MAPQ=60;MATEID=194660:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_146657001_146682001_45C;SPAN=4760;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:34:29:9.3:102.3,9.3,0:34:0:-102.3:102.3\n3\t146677075\t194657:2\tC\t]3:146667403]C\t65\tPASS\tEVDNC=ASSMB;HOMSEQ=CA;MAPQ=60;MATEID=194657:1;MATENM=3;NM=3;NUMPARTS=2;SCTG=c_3_146657001_146682001_118C;SPAN=9672;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:23:36:23:65.9,0,23:23:0:-66.82:66.82\n3\t146677378\t194660:2\tA\tA[3:146672618[\t99\tPASS\tEVDNC=ASSMB;INSERTION=ATTGGGGAG;MAPQ=60;MATEID=194660:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_146657001_146682001_45C;SPAN=4760;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:34:29:9.3:102.3,9.3,0:34:0:-102.3:102.3\n3\t148563653\t195155:1\tG\tG[3:148567640[\t99\tPASS\tEVDNC=ASSMB;INSERTION=A;MAPQ=60;MATEID=195155:2;MATENM=6;NM=3;NUMPARTS=2;SCTG=c_3_148543501_148568501_31C;SPAN=3987;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:43:25:12:132,12,0:43:0:-132:132\n3\t148567640\t195155:2\tA\t]3:148563653]A\t99\tPASS\tEVDNC=ASSMB;INSERTION=A;MAPQ=60;MATEID=195155:1;MATENM=3;NM=6;NUMPARTS=2;SCTG=c_3_148543501_148568501_31C;SPAN=3987;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:43:25:12:132,12,0:43:0:-132:132\n3\t148761366\t195224:1\tC\tC]3:148781756]\t82\tPASS\tDISC_MAPQ=48;EVDNC=DSCRD;IMPRECISE;MAPQ=48;MATEID=195224:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=3:148761366(+)-3:148781756(+)__3_148739501_148764501D;SPAN=20390;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:27:10:7.5:82.5,7.5,0:0:27:-82.52:82.52\n3\t148761604\t195225:1\tA\t[3:148781404[A\t35\tPASS\tDISC_MAPQ=41;EVDNC=DSCRD;IMPRECISE;MAPQ=41;MATEID=195225:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=3:148761604(-)-3:148781404(-)__3_148739501_148764501D;SPAN=19800;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:17:5.3:35,0,5.3:0:12:-35.78:35.78\n3\t148781404\t195225:2\tT\t[3:148761604[T\t35\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=195225:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=3:148761604(-)-3:148781404(-)__3_148739501_148764501D;SPAN=19800;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:17:5.3:35,0,5.3:0:12:-35.78:35.78\n3\t148781756\t195224:2\tA\tA]3:148761366]\t82\tPASS\tDISC_MAPQ=46;EVDNC=DSCRD;IMPRECISE;MAPQ=46;MATEID=195224:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=3:148761366(+)-3:148781756(+)__3_148739501_148764501D;SPAN=20390;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:27:10:7.5:82.5,7.5,0:0:27:-82.52:82.52\n3\t148849015\t195256:1\tT\tT[3:148849324[\t99\tPASS\tEVDNC=ASSMB;HOMSEQ=AGACCTCTTT;MAPQ=60;MATEID=195256:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_3_148837501_148862501_66C;SPAN=309;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:36:22:9.9:108.9,9.9,0:36:0:-108.9:108.9\n3\t148849324\t195256:2\tA\t]3:148849015]A\t99\tPASS\tEVDNC=ASSMB;HOMSEQ=AGACCTCTTT;MAPQ=60;MATEID=195256:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_3_148837501_148862501_66C;SPAN=309;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:36:22:9.9:108.9,9.9,0:36:0:-108.9:108.9\n3\t149126599\t195347:1\tA\tA[3:149126914[\t27\tPASS\tEVDNC=ASSMB;HOMSEQ=AAGATGCAAAAATA;MAPQ=60;MATEID=195347:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_149107001_149132001_114C;SPAN=315;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:32:27.5:27.5,0,50.6:11:0:-27.32:27.77\n3\t149126914\t195347:2\tA\t]3:149126599]A\t27\tPASS\tEVDNC=ASSMB;HOMSEQ=AAGATGCAAAAATA;MAPQ=60;MATEID=195347:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_149107001_149132001_114C;SPAN=315;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:32:27.5:27.5,0,50.6:11:0:-27.32:27.77\n3\t149550689\t195535:1\tA\tA[3:149552360[\t85\tPASS\tEVDNC=ASSMB;HOMSEQ=AGGGA;MAPQ=60;MATEID=195535:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_149548001_149573001_52C;SPAN=1671;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:27:28:7.8:85.8,7.8,0:27:0:-85.82:85.82\n3\t149552360\t195535:2\tA\t]3:149550689]A\t85\tPASS\tEVDNC=ASSMB;HOMSEQ=AGGGA;MAPQ=60;MATEID=195535:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_149548001_149573001_52C;SPAN=1671;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:27:28:7.8:85.8,7.8,0:27:0:-85.82:85.82\n3\t152031061\t205410:1\tG\tG]3:176727181]\t89\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TG;MAPQ=60;MATEID=205410:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_3_176718501_176743501_72C;SPAN=24696120;SUBN=3;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:29:22:8.1:89.1,8.1,0:23:11:-89.12:89.12\n3\t152593949\t196598:1\tT\tT[3:152595367[\t99\tPASS\tEVDNC=ASSMB;HOMSEQ=AAGAGGTCACTGTTT;MAPQ=60;MATEID=196598:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_152586001_152611001_23C;SPAN=1418;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:38:44:2.4:115.5,2.4,0:38:0:-120.7:120.7\n3\t152595367\t196598:2\tA\t]3:152593949]A\t99\tPASS\tEVDNC=ASSMB;HOMSEQ=AAGAGGTCACTGTTT;MAPQ=60;MATEID=196598:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_152586001_152611001_23C;SPAN=1418;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:38:44:2.4:115.5,2.4,0:38:0:-120.7:120.7\n3\t152899403\t196720:1\tT\tT[3:152899593[\t5\tPASS\tEVDNC=ASSMB;INSERTION=AGCTAGGTA;MAPQ=60;MATEID=196720:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_152880001_152905001_13C;SPAN=190;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:5:38:5.9:5.9,0,88.4:5:0:-5.824:10.24\n3\t152899593\t196720:2\tT\t]3:152899403]T\t5\tPASS\tEVDNC=ASSMB;INSERTION=AGCTAGGTA;MAPQ=60;MATEID=196720:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_152880001_152905001_13C;SPAN=190;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:5:38:5.9:5.9,0,88.4:5:0:-5.824:10.24\n3\t155693184\t197706:1\tT\tT[3:155693494[\t99\tPASS\tEVDNC=ASSMB;HOMSEQ=AAGAAAGCACAGACTT;MAPQ=60;MATEID=197706:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_3_155673001_155698001_87C;SPAN=310;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:34:23:9.3:102.3,9.3,0:34:0:-102.3:102.3\n3\t155693494\t197706:2\tA\t]3:155693184]A\t99\tPASS\tEVDNC=ASSMB;HOMSEQ=AAGAAAGCACAGACTT;MAPQ=60;MATEID=197706:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_3_155673001_155698001_87C;SPAN=310;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:34:23:9.3:102.3,9.3,0:34:0:-102.3:102.3\n3\t158399128\t198545:1\tT\tT[3:158399456[\t9\tPASS\tEVDNC=ASSMB;HOMSEQ=CTATTATTTCCTTTTT;MAPQ=60;MATEID=198545:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_158392501_158417501_63C;SPAN=328;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:16:156:9.1:9.1,0,382.1:16:0:-8.966:30.94\n3\t158399456\t198545:2\tC\t]3:158399128]C\t9\tPASS\tEVDNC=ASSMB;HOMSEQ=CTATTATTTCCTTTTT;MAPQ=60;MATEID=198545:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_158392501_158417501_63C;SPAN=328;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:16:156:9.1:9.1,0,382.1:16:0:-8.966:30.94\n3\t158632951\t198663:1\tC\tC[3:158634123[\t20\tPASS\tEVDNC=ASSMB;HOMSEQ=C;MAPQ=60;MATEID=198663:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_158613001_158638001_13C;SPAN=1172;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:43:20.9:20.9,0,86.9:10:0:-20.92:23.23\n3\t158634123\t198663:2\tC\t]3:158632951]C\t20\tPASS\tEVDNC=ASSMB;HOMSEQ=C;MAPQ=60;MATEID=198663:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_158613001_158638001_13C;SPAN=1172;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:43:20.9:20.9,0,86.9:10:0:-20.92:23.23\n3\t158729656\t198943:1\tC\t]3:159791445]C\t47\tPASS\tDISC_MAPQ=52;EVDNC=ASDIS;HOMSEQ=CT;MAPQ=60;MATEID=198943:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_159789001_159814001_25C;SPAN=1061789;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:17:33:33.8:47,0,33.8:13:10:-46.91:46.91\n3\t158733071\t198708:1\tC\t]3:158737844]C\t56\tPASS\tDISC_MAPQ=52;EVDNC=ASDIS;HOMSEQ=CA;MAPQ=60;MATEID=198708:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_158735501_158760501_49C;SPAN=4773;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:20:36:32.9:56,0,32.9:14:16:-56.16:56.16\n3\t158737844\t198708:2\tA\tA[3:158733071[\t56\tPASS\tDISC_MAPQ=56;EVDNC=ASDIS;HOMSEQ=CA;MAPQ=60;MATEID=198708:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_158735501_158760501_49C;SPAN=4773;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:20:36:32.9:56,0,32.9:14:16:-56.16:56.16\n3\t159306188\t198837:1\tT\t]3:159306326]T\t43\tPASS\tEVDNC=ASSMB;HOMSEQ=TAATAAC;MAPQ=60;MATEID=198837:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_3_159299001_159324001_42C;SPAN=138;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:19:68:43.7:43.7,0,126.2:19:0:-43.61:45.9\n3\t159306326\t198837:2\tC\tC[3:159306188[\t43\tPASS\tEVDNC=ASSMB;HOMSEQ=TAATAAC;MAPQ=60;MATEID=198837:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_3_159299001_159324001_42C;SPAN=138;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:19:68:43.7:43.7,0,126.2:19:0:-43.61:45.9\n3\t159791445\t198943:2\tT\tT[3:158729656[\t47\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=CT;MAPQ=60;MATEID=198943:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_159789001_159814001_25C;SPAN=1061789;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:17:33:33.8:47,0,33.8:13:10:-46.91:46.91\n3\t161025129\t199594:1\tT\t]3:161713703]T\t55\tPASS\tEVDNC=ASSMB;HOMSEQ=TTA;MAPQ=60;MATEID=199594:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_161700001_161725001_21C;SPAN=688574;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:20:37:35.9:55.7,0,35.9:20:0:-55.81:55.81\n3\t161528940\t199540:1\tT\tT[3:161529260[\t99\tPASS\tEVDNC=ASSMB;HOMSEQ=AGAATGTGTCATTCCT;MAPQ=60;MATEID=199540:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_161528501_161553501_66C;SPAN=320;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:42:36:11.7:128.7,11.7,0:42:0:-128.7:128.7\n3\t161529260\t199540:2\tA\t]3:161528940]A\t99\tPASS\tEVDNC=ASSMB;HOMSEQ=AGAATGTGTCATTCCT;MAPQ=60;MATEID=199540:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_161528501_161553501_66C;SPAN=320;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:42:36:11.7:128.7,11.7,0:42:0:-128.7:128.7\n3\t161569425\t199605:1\tC\t]3:161742789]C\t24\tPASS\tEVDNC=ASSMB;INSERTION=CCTCA;MAPQ=60;MATEID=199605:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_3_161724501_161749501_109C;SPAN=173364;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:19:21.2:24.5,0,21.2:9:0:-24.37:24.37\n3\t161713703\t199594:2\tA\tA[3:161025129[\t55\tPASS\tEVDNC=ASSMB;HOMSEQ=TTA;MAPQ=60;MATEID=199594:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_161700001_161725001_21C;SPAN=688574;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:20:37:35.9:55.7,0,35.9:20:0:-55.81:55.81\n3\t161742789\t199605:2\tA\tA[3:161569425[\t24\tPASS\tEVDNC=ASSMB;INSERTION=CCTCA;MAPQ=60;MATEID=199605:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_3_161724501_161749501_109C;SPAN=173364;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:19:21.2:24.5,0,21.2:9:0:-24.37:24.37\n3\t162690522\t200063:1\tT\tT[3:162690825[\t17\tPASS\tEVDNC=ASSMB;HOMSEQ=TATGTTTCTGTTTT;MAPQ=60;MATEID=200063:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_3_162680001_162705001_149C;SPAN=303;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:30:17.9:17.9,0,57.5:8:0:-17.98:19.13\n3\t162690825\t200063:2\tT\t]3:162690522]T\t17\tPASS\tEVDNC=ASSMB;HOMSEQ=TATGTTTCTGTTTT;MAPQ=60;MATEID=200063:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_3_162680001_162705001_149C;SPAN=303;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:30:17.9:17.9,0,57.5:8:0:-17.98:19.13\n3\t162827575\t200142:1\tG\t[3:162829871[G\t29\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;INSERTION=C;MAPQ=60;MATEID=200142:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_162827001_162852001_35C;SPAN=2296;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:35:29.9:29.9,0,56.3:9:7:-29.77:30.28\n3\t162829871\t200142:2\tA\t[3:162827575[A\t29\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;INSERTION=C;MAPQ=60;MATEID=200142:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_162827001_162852001_35C;SPAN=2296;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:35:29.9:29.9,0,56.3:9:7:-29.77:30.28\n3\t163047113\t200254:1\tT\tT[3:163051297[\t34\tPASS\tEVDNC=ASSMB;INSERTION=GT;MAPQ=60;MATEID=200254:2;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_3_163047501_163072501_40C;SPAN=4184;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:20:14.3:34.1,0,14.3:12:0:-34.32:34.32\n3\t163051297\t200254:2\tA\t]3:163047113]A\t34\tPASS\tEVDNC=ASSMB;INSERTION=GT;MAPQ=60;MATEID=200254:1;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_3_163047501_163072501_40C;SPAN=4184;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:20:14.3:34.1,0,14.3:12:0:-34.32:34.32\n3\t163386382\t200395:1\tG\tG[Un_KN707713v1_decoy:1[\t99\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=200395:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_163366001_163391001_33C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:37:26:10.2:112.2,10.2,0:37:0:-112.2:112.2\n3\t163386382\t988285:1\tG\tG[Un_KN707713v1_decoy:1[\t99\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=988285:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_564_1_1308_4C;SPAN=-1;SUBN=1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:35:11:9.6:105.6,9.6,0:35:0:-105.6:105.6\n3\t165861102\t283092:1\tG\t]5:26230726]G\t39\tPASS\tDISC_MAPQ=22;EVDNC=DSCRD;IMPRECISE;MAPQ=22;MATEID=283092:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=3:165861102(-)-5:26230726(+)__5_26215001_26240001D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:13:12:3.6:39.6,3.6,0:0:13:-39.61:39.61\n3\t166722402\t201766:1\tC\t[5:51925610[C\t57\tPASS\tDISC_MAPQ=27;EVDNC=DSCRD;IMPRECISE;MAPQ=27;MATEID=201766:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=3:166722402(-)-5:51925610(-)__3_166698001_166723001D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:20:31:17.9:57.5,0,17.9:0:20:-58.24:58.24\n3\t170401792\t203025:1\tA\tA[3:170402090[\t99\tPASS\tDISC_MAPQ=59;EVDNC=ASDIS;HOMSEQ=AAAAAACTAAATAATA;MAPQ=60;MATEID=203025:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_3_170397501_170422501_40C;SPAN=298;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:67:25:18.6:204.6,18.6,0:46:26:-204.7:204.7\n3\t170402090\t203025:2\tA\t]3:170401792]A\t99\tPASS\tDISC_MAPQ=58;EVDNC=ASDIS;HOMSEQ=AAAAAACTAAATAATA;MAPQ=60;MATEID=203025:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_3_170397501_170422501_40C;SPAN=298;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:67:25:18.6:204.6,18.6,0:46:26:-204.7:204.7\n3\t172347176\t203693:2\tT\tT[3:146088175[\t25\tPASS\tEVDNC=ASSMB;HOMSEQ=CAGT;MAPQ=60;MATEID=203693:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_172333001_172358001_99C;SPAN=26259001;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:27:25.4:25.4,0,41.9:10:0:-25.42:25.66\n3\t174952168\t204975:1\tC\t]3:175621829]C\t70\tPASS\tEVDNC=ASSMB;INSERTION=TG;MAPQ=60;MATEID=204975:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_175616001_175641001_58C;SPAN=669661;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:24:31:4.7:70.7,0,4.7:24:0:-73.47:73.47\n3\t175307660\t204822:1\tC\tC[3:175421297[\t31\tPASS\tEVDNC=ASSMB;HOMSEQ=CAGC;MAPQ=60;MATEID=204822:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_175420001_175445001_37C;SPAN=113637;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:41:31.4:31.4,0,71:13:0:-31.39:32.26\n3\t175421297\t204822:2\tC\t]3:175307660]C\t31\tPASS\tEVDNC=ASSMB;HOMSEQ=CAGC;MAPQ=60;MATEID=204822:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_175420001_175445001_37C;SPAN=113637;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:41:31.4:31.4,0,71:13:0:-31.39:32.26\n3\t175448963\t204886:1\tG\tG[3:175512033[\t17\tPASS\tEVDNC=ASSMB;HOMSEQ=TG;MAPQ=60;MATEID=204886:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_175493501_175518501_16C;SPAN=63070;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:34:17:17,0,66.5:8:0:-16.85:18.63\n3\t175512033\t204886:2\tT\t]3:175448963]T\t17\tPASS\tEVDNC=ASSMB;HOMSEQ=TG;MAPQ=60;MATEID=204886:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_175493501_175518501_16C;SPAN=63070;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:34:17:17,0,66.5:8:0:-16.85:18.63\n3\t175621829\t204975:2\tC\tC[3:174952168[\t70\tPASS\tEVDNC=ASSMB;INSERTION=TG;MAPQ=60;MATEID=204975:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_175616001_175641001_58C;SPAN=669661;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:24:31:4.7:70.7,0,4.7:24:0:-73.47:73.47\n3\t176102403\t205151:1\tG\t]3:176102572]G\t34\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=205151:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_3_176081501_176106501_72C;SPAN=169;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:15:55:34.1:34.1,0,103.4:15:0:-34.06:36.05\n3\t176102572\t205151:2\tC\tC[3:176102403[\t34\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=205151:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_3_176081501_176106501_72C;SPAN=169;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:15:55:34.1:34.1,0,103.4:15:0:-34.06:36.05\n3\t176189690\t916262:1\tC\t]22:28669436]C\t6\tPASS\tEVDNC=ASSMB;HOMSEQ=CAGTT;MAPQ=60;MATEID=916262:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_22_28665001_28690001_73C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:105:6.8:6.8,0,257.6:11:0:-6.796:21.38\n3\t176434607\t205326:1\tA\t]3:176444476]A\t99\tPASS\tEVDNC=ASSMB;HOMSEQ=A;MAPQ=60;MATEID=205326:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_176424501_176449501_53C;SPAN=9869;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:34:46:13.7:99.5,0,13.7:34:0:-102.7:102.7\n3\t176444476\t205326:2\tA\tA[3:176434607[\t99\tPASS\tEVDNC=ASSMB;HOMSEQ=A;MAPQ=60;MATEID=205326:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_176424501_176449501_53C;SPAN=9869;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:34:46:13.7:99.5,0,13.7:34:0:-102.7:102.7\n3\t176727181\t205410:2\tA\tA]3:152031061]\t89\tPASS\tDISC_MAPQ=9;EVDNC=ASDIS;HOMSEQ=TG;MAPQ=38;MATEID=205410:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_3_176718501_176743501_72C;SPAN=24696120;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:29:22:8.1:89.1,8.1,0:23:11:-89.12:89.12\n3\t177122919\t371708:1\tC\tC[6:153202309[\t92\tPASS\tDISC_MAPQ=59;EVDNC=DSCRD;IMPRECISE;MAPQ=59;MATEID=371708:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=3:177122919(+)-6:153202309(-)__6_153198501_153223501D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:31:6:8.4:92.4,8.4,0:0:31:-92.42:92.42\n3\t177126512\t371709:1\tT\tT[6:153202067[\t69\tPASS\tDISC_MAPQ=255;EVDNC=TSI_L;HOMSEQ=ATC;INSERTION=T;MAPQ=60;MATEID=371709:2;MATENM=1;NM=0;NUMPARTS=3;SCTG=c_6_153198501_153223501_16C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:23:18:6.3:69.3,6.3,0:23:0:-69.32:69.32\n3\t178832345\t206192:1\tC\tC[3:178833084[\t95\tPASS\tEVDNC=ASSMB;HOMSEQ=GCC;MAPQ=60;MATEID=206192:2;MATENM=2;NM=2;NUMPARTS=2;SCTG=c_3_178825501_178850501_51C;SPAN=739;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:32:15:8.7:95.7,8.7,0:32:0:-95.72:95.72\n3\t178833084\t206192:2\tG\t]3:178832345]G\t95\tPASS\tEVDNC=ASSMB;HOMSEQ=GCC;MAPQ=60;MATEID=206192:1;MATENM=2;NM=2;NUMPARTS=2;SCTG=c_3_178825501_178850501_51C;SPAN=739;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:32:15:8.7:95.7,8.7,0:32:0:-95.72:95.72\n3\t178849865\t206201:1\tA\tA[3:178850556[\t79\tPASS\tEVDNC=ASSMB;HOMSEQ=A;MAPQ=60;MATEID=206201:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_3_178850001_178875001_90C;SPAN=691;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:26:18:7.2:79.2,7.2,0:26:0:-79.22:79.22\n3\t178850556\t206201:2\tA\t]3:178849865]A\t79\tPASS\tEVDNC=ASSMB;HOMSEQ=A;MAPQ=60;MATEID=206201:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_3_178850001_178875001_90C;SPAN=691;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:26:18:7.2:79.2,7.2,0:26:0:-79.22:79.22\n3\t178965525\t206219:1\tA\tA[3:178965814[\t25\tPASS\tEVDNC=ASSMB;HOMSEQ=A;MAPQ=60;MATEID=206219:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_178948001_178973001_1C;SPAN=289;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:40:25.1:25.1,0,74.6:11:0:-25.07:26.48\n3\t178965814\t206219:2\tA\t]3:178965525]A\t25\tPASS\tEVDNC=ASSMB;HOMSEQ=A;MAPQ=60;MATEID=206219:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_178948001_178973001_1C;SPAN=289;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:40:25.1:25.1,0,74.6:11:0:-25.07:26.48\n3\t179936553\t206454:1\tC\tC[3:179937017[\t82\tPASS\tEVDNC=ASSMB;HOMSEQ=TC;MAPQ=60;MATEID=206454:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_179928001_179953001_81C;SPAN=464;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:27:27:7.5:82.5,7.5,0:27:0:-82.52:82.52\n3\t179937017\t206454:2\tT\t]3:179936553]T\t82\tPASS\tEVDNC=ASSMB;HOMSEQ=TC;MAPQ=60;MATEID=206454:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_179928001_179953001_81C;SPAN=464;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:27:27:7.5:82.5,7.5,0:27:0:-82.52:82.52\n3\t182153134\t207028:1\tC\t]3:182153263]C\t94\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=207028:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_182133001_182158001_26C;SPAN=129;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:34:65:67.7:94.1,0,67.7:34:0:-94.15:94.15\n3\t182153263\t207028:2\tA\tA[3:182153134[\t94\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=207028:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_182133001_182158001_26C;SPAN=129;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:34:65:67.7:94.1,0,67.7:34:0:-94.15:94.15\n3\t182830325\t207207:1\tA\t]3:182975990]A\t30\tPASS\tDISC_MAPQ=50;EVDNC=ASDIS;HOMSEQ=AAA;MAPQ=60;MATEID=207207:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_182966001_182991001_41C;SPAN=145665;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:20:17.6:30.8,0,17.6:7:10:-30.82:30.82\n3\t182975990\t207207:2\tA\tA[3:182830325[\t30\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AAA;MAPQ=60;MATEID=207207:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_182966001_182991001_41C;SPAN=145665;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:20:17.6:30.8,0,17.6:7:10:-30.82:30.82\n3\t183712226\t560853:1\tT\tT[10:94531640[\t23\tPASS\tEVDNC=ASSMB;HOMSEQ=TTATTTTATTTTATTTTATTTTATTTTATTTT;MAPQ=60;MATEID=560853:2;MATENM=1;NM=0;NUMPARTS=3;SCTG=c_10_94521001_94546001_53C;SECONDARY;SPAN=-1;SUBN=4;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:21:23.9:23.9,0,27.2:9:0:-23.81:23.84\n3\t184159056\t207741:1\tG\tG[3:184159616[\t41\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=GGCCTCCCAAAGTGCTGGGATTACAGGTG;MAPQ=60;MATEID=207741:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_3_184142001_184167001_71C;SPAN=560;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:15:28:28.4:41.6,0,28.4:11:8:-41.77:41.77\n3\t184159616\t207741:2\tG\t]3:184159056]G\t41\tPASS\tDISC_MAPQ=52;EVDNC=ASDIS;HOMSEQ=GGCCTCCCAAAGTGCTGGGATTACAGGTG;MAPQ=60;MATEID=207741:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_3_184142001_184167001_71C;SPAN=560;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:15:28:28.4:41.6,0,28.4:11:8:-41.77:41.77\n3\t185432358\t110651:2\tT\t]2:128082406]T\t66\tPASS\tDISC_MAPQ=3;EVDNC=ASDIS;HOMSEQ=TTTTTGTGTTTTTAGTAGAGACAGGGTTTCAC;MAPQ=33;MATEID=110651:1;MATENM=6;NM=2;NUMPARTS=2;SCTG=c_2_128061501_128086501_81C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:22:13:6:66,6,0:18:9:-66.02:66.02\n3\t185794263\t208397:1\tG\tG[3:185794490[\t35\tPASS\tEVDNC=ASSMB;INSERTION=GGGATCACAGAGC;MAPQ=60;MATEID=208397:2;MATENM=4;NM=0;NUMPARTS=2;SCTG=c_3_185783501_185808501_121C;SPAN=227;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:26:29:35.6,0,29:13:0:-35.63:35.63\n3\t185794490\t208397:2\tC\t]3:185794263]C\t35\tPASS\tEVDNC=ASSMB;INSERTION=GGGATCACAGAGC;MAPQ=60;MATEID=208397:1;MATENM=0;NM=4;NUMPARTS=2;SCTG=c_3_185783501_185808501_121C;SPAN=227;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:26:29:35.6,0,29:13:0:-35.63:35.63\n3\t186858374\t482537:1\tT\t[8:143618862[T\t52\tPASS\tDISC_MAPQ=53;EVDNC=ASDIS;HOMSEQ=TA;MAPQ=60;MATEID=482537:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_143619001_143644001_92C;SPAN=-1;SUBN=3;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:18:1:4.8:52.8,4.8,0:13:9:-52.81:52.81\n3\t186863244\t208824:1\tG\tG[3:186867496[\t86\tPASS\tEVDNC=ASSMB;HOMSEQ=GAAAAATATTGCAAATAG;MAPQ=60;MATEID=208824:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_3_186861501_186886501_57C;SPAN=4252;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:31:56:53.6:86.6,0,53.6:31:0:-86.98:86.98\n3\t186867496\t208824:2\tG\t]3:186863244]G\t86\tPASS\tEVDNC=ASSMB;HOMSEQ=GAAAAATATTGCAAATAG;MAPQ=60;MATEID=208824:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_3_186861501_186886501_57C;SPAN=4252;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:31:56:53.6:86.6,0,53.6:31:0:-86.98:86.98\n3\t187108877\t208922:1\tT\tT[3:187109182[\t89\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AAAATTTGTT;MAPQ=60;MATEID=208922:2;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_3_187106501_187131501_36C;SPAN=305;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:29:25:8.1:89.1,8.1,0:23:6:-89.12:89.12\n3\t187109182\t208922:2\tA\t]3:187108877]A\t89\tPASS\tDISC_MAPQ=59;EVDNC=ASDIS;HOMSEQ=AAAATTTGTT;MAPQ=60;MATEID=208922:1;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_3_187106501_187131501_36C;SPAN=305;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:29:25:8.1:89.1,8.1,0:23:6:-89.12:89.12\n3\t188357984\t209436:1\tA\t]3:188394904]A\t29\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=209436:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_188380501_188405501_6C;SPAN=36920;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:26:29:29,0,35.6:11:0:-29:29.05\n3\t188394904\t209436:2\tT\tT[3:188357984[\t29\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=209436:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_188380501_188405501_6C;SPAN=36920;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:26:29:29,0,35.6:11:0:-29:29.05\n3\t190019559\t210058:1\tA\tA[3:190022736[\t66\tPASS\tEVDNC=ASSMB;HOMSEQ=CTCA;MAPQ=60;MATEID=210058:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_190022001_190047001_21C;SPAN=3177;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:22:14:6:66,6,0:22:0:-66.02:66.02\n3\t190022736\t210058:2\tC\t]3:190019559]C\t66\tPASS\tEVDNC=ASSMB;HOMSEQ=CTCA;MAPQ=60;MATEID=210058:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_190022001_190047001_21C;SPAN=3177;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:22:14:6:66,6,0:22:0:-66.02:66.02\n3\t190237631\t210179:1\tT\tT[3:190237921[\t48\tPASS\tEVDNC=ASSMB;HOMSEQ=CCTGTGTTTTTT;MAPQ=60;MATEID=210179:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_190218001_190243001_78C;SPAN=290;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:17:28:21.8:48.2,0,21.8:17:0:-48.77:48.77\n3\t190237921\t210179:2\tC\t]3:190237631]C\t48\tPASS\tEVDNC=ASSMB;HOMSEQ=CCTGTGTTTTTT;MAPQ=60;MATEID=210179:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_190218001_190243001_78C;SPAN=290;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:17:28:21.8:48.2,0,21.8:17:0:-48.77:48.77\n3\t190572861\t210321:1\tT\tT[3:190573148[\t38\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AATGCTTTGTT;MAPQ=60;MATEID=210321:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_3_190561001_190586001_38C;SPAN=287;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:18:5:38,0,5:7:7:-39.01:39.01\n3\t190573148\t210321:2\tA\t]3:190572861]A\t38\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AATGCTTTGTT;MAPQ=60;MATEID=210321:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_3_190561001_190586001_38C;SPAN=287;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:18:5:38,0,5:7:7:-39.01:39.01\n3\t190952018\t210426:1\tA\tA[3:190952332[\t85\tPASS\tEVDNC=ASSMB;HOMSEQ=AAAGAGTGTA;MAPQ=60;MATEID=210426:2;MATENM=5;NM=0;NUMPARTS=2;SCTG=c_3_190928501_190953501_0C;SPAN=314;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:26:28:7.8:85.8,7.8,0:26:0:-85.43:85.43\n3\t190952332\t210426:2\tA\t]3:190952018]A\t85\tPASS\tEVDNC=ASSMB;HOMSEQ=AAAGAGTGTA;MAPQ=60;MATEID=210426:1;MATENM=0;NM=5;NUMPARTS=2;SCTG=c_3_190928501_190953501_0C;SPAN=314;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:26:28:7.8:85.8,7.8,0:26:0:-85.43:85.43\n3\t190978865\t210444:1\tC\tC[3:190979149[\t43\tPASS\tEVDNC=ASSMB;HOMSEQ=ATATAAATTACCC;MAPQ=60;MATEID=210444:2;MATENM=2;NM=1;NUMPARTS=2;SCTG=c_3_190977501_191002501_1C;SPAN=284;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:15:21:7.4:43.7,0,7.4:15:0:-44.87:44.87\n3\t190979149\t210444:2\tA\t]3:190978865]A\t43\tPASS\tEVDNC=ASSMB;HOMSEQ=ATATAAATTACCC;MAPQ=60;MATEID=210444:1;MATENM=1;NM=2;NUMPARTS=2;SCTG=c_3_190977501_191002501_1C;SPAN=284;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:15:21:7.4:43.7,0,7.4:15:0:-44.87:44.87\n3\t192345405\t211008:1\tA\tA[3:192345703[\t85\tPASS\tEVDNC=ASSMB;HOMSEQ=AAGATATAACATA;MAPQ=60;MATEID=211008:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_192325001_192350001_16C;SPAN=298;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:27:28:7.8:85.8,7.8,0:27:0:-85.82:85.82\n3\t192345703\t211008:2\tA\t]3:192345405]A\t85\tPASS\tEVDNC=ASSMB;HOMSEQ=AAGATATAACATA;MAPQ=60;MATEID=211008:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_192325001_192350001_16C;SPAN=298;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:27:28:7.8:85.8,7.8,0:27:0:-85.82:85.82\n3\t193059075\t211257:1\tT\tT[3:193064810[\t49\tPASS\tEVDNC=ASSMB;HOMSEQ=TTTGT;MAPQ=60;MATEID=211257:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_193060001_193085001_76C;SPAN=5735;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:17:16:4.5:49.5,4.5,0:17:0:-49.51:49.51\n3\t193064810\t211257:2\tT\t]3:193059075]T\t49\tPASS\tEVDNC=ASSMB;HOMSEQ=TTTGT;MAPQ=60;MATEID=211257:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_193060001_193085001_76C;SPAN=5735;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:17:16:4.5:49.5,4.5,0:17:0:-49.51:49.51\n3\t193473457\t211437:1\tT\t]3:193543259]T\t69\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=211437:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_193525501_193550501_36C;SPAN=69802;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:21:23:6.3:69.3,6.3,0:21:0:-68.32:68.32\n3\t193543259\t211437:2\tT\tT[3:193473457[\t69\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=211437:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_193525501_193550501_36C;SPAN=69802;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:21:23:6.3:69.3,6.3,0:21:0:-68.32:68.32\n3\t194569581\t211821:1\tC\tC[3:194569800[\t16\tPASS\tEVDNC=ASSMB;HOMSEQ=CAGGAATTCGAGACCAGCCTGACCAAC;MAPQ=60;MATEID=211821:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_194554501_194579501_37C;SPAN=219;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:7:24:16.4:16.4,0,42.8:7:0:-16.36:17.07\n3\t194569800\t211821:2\tC\t]3:194569581]C\t16\tPASS\tEVDNC=ASSMB;HOMSEQ=CAGGAATTCGAGACCAGCCTGACCAAC;MAPQ=60;MATEID=211821:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_194554501_194579501_37C;SPAN=219;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:7:24:16.4:16.4,0,42.8:7:0:-16.36:17.07\n3\t194663426\t211869:1\tC\tC[3:194663749[\t67\tPASS\tDISC_MAPQ=58;EVDNC=ASDIS;HOMSEQ=CCTTTCCCTTCTTCCGCCTCAGAGAAAGCCTTTCCCTTCTTCTGCCTCAGAGAAAGCCTTTCCCTTCTTC;MAPQ=60;MATEID=211869:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_3_194652501_194677501_173C;SPAN=323;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:23:32:11:67.1,0,11:16:8:-68.92:68.92\n3\t194663749\t211869:2\tC\t]3:194663426]C\t67\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=CCTTTCCCTTCTTCCGCCTCAGAGAAAGCCTTTCCCTTCTTCTGCCTCAGAGAAAGCCTTTCCCTTCTTC;MAPQ=60;MATEID=211869:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_3_194652501_194677501_173C;SPAN=323;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:23:32:11:67.1,0,11:16:8:-68.92:68.92\n3\t194678016\t211879:1\tC\tC[3:194679562[\t29\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=211879:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=3:194678016(+)-3:194679562(-)__3_194677001_194702001D;SPAN=1546;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:24:29.6:29.6,0,29.6:0:11:-29.57:29.57\n3\t194679562\t211879:2\tA\t]3:194678016]A\t29\tPASS\tDISC_MAPQ=57;EVDNC=DSCRD;IMPRECISE;MAPQ=57;MATEID=211879:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=3:194678016(+)-3:194679562(-)__3_194677001_194702001D;SPAN=1546;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:24:29.6:29.6,0,29.6:0:11:-29.57:29.57\n3\t194822565\t211925:1\tG\tG[3:194825528[\t39\tPASS\tEVDNC=ASSMB;HOMSEQ=GGTG;MAPQ=60;MATEID=211925:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_194824001_194849001_168C;SPAN=2963;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:24:19.7:39.5,0,19.7:14:0:-39.77:39.77\n3\t194822581\t211927:1\tC\t]3:194825702]C\t50\tPASS\tEVDNC=ASSMB;HOMSEQ=CC;MAPQ=60;MATEID=211927:2;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_3_194824001_194849001_105C;SPAN=3121;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:17:22:3.8:50,0,3.8:17:0:-52.01:52.01\n3\t194825528\t211925:2\tG\t]3:194822565]G\t39\tPASS\tEVDNC=ASSMB;HOMSEQ=GGTG;MAPQ=60;MATEID=211925:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_194824001_194849001_168C;SPAN=2963;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:24:19.7:39.5,0,19.7:14:0:-39.77:39.77\n3\t194825702\t211927:2\tC\tC[3:194822581[\t50\tPASS\tEVDNC=ASSMB;HOMSEQ=CC;MAPQ=60;MATEID=211927:1;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_3_194824001_194849001_105C;SPAN=3121;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:17:22:3.8:50,0,3.8:17:0:-52.01:52.01\n3\t194894010\t211954:1\tT\tT[3:194894311[\t58\tPASS\tEVDNC=ASSMB;HOMSEQ=CTATGCGCTCTTTCTT;MAPQ=60;MATEID=211954:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_3_194873001_194898001_35C;SPAN=301;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:20:27:8.9:58.4,0,8.9:20:0:-60.44:60.44\n3\t194894311\t211954:2\tC\t]3:194894010]C\t58\tPASS\tEVDNC=ASSMB;HOMSEQ=CTATGCGCTCTTTCTT;MAPQ=60;MATEID=211954:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_3_194873001_194898001_35C;SPAN=301;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:20:27:8.9:58.4,0,8.9:20:0:-60.44:60.44\n3\t195886346\t883494:1\tC\t[20:48827701[C\t1\tPASS\tDISC_MAPQ=255;EVDNC=ASDIS;INSERTION=CTACTT;MAPQ=60;MATEID=883494:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_48804001_48829001_21C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:5:55:1.1:1.1,0,136.4:3:3:-1.045:9.394\n3\t196523895\t213005:1\tC\tC[3:196524559[\t21\tPASS\tEVDNC=ASSMB;HOMSEQ=C;MAPQ=60;MATEID=213005:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_196514501_196539501_24C;SPAN=664;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:66:21.2:21.2,0,143.3:12:0:-21.06:26.43\n3\t196524559\t213005:2\tC\t]3:196523895]C\t21\tPASS\tEVDNC=ASSMB;HOMSEQ=C;MAPQ=60;MATEID=213005:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_196514501_196539501_24C;SPAN=664;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:66:21.2:21.2,0,143.3:12:0:-21.06:26.43\n3\t196591623\t213057:1\tT\t[11:45377756[T\t99\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=CTCTGTCACCCAGGCTGGAGTGCAATGGCGCGATCTCGGCTCACTGCAA;MAPQ=60;MATEID=213057:2;MATENM=2;NM=1;NUMPARTS=2;SCTG=c_3_196588001_196613001_28C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:45:15:12.6:138.6,12.6,0:44:7:-138.6:138.6\n3\t196602062\t213065:1\tA\tA[3:196602380[\t0\tPASS\tEVDNC=ASSMB;HOMSEQ=GAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCA;MAPQ=60;MATEID=213065:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_3_196588001_196613001_4C;SPAN=318;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/0:5:70:3:0,3,181.5:5:0:3.171:8.849\n3\t196602380\t213065:2\tG\t]3:196602062]G\t0\tPASS\tEVDNC=ASSMB;HOMSEQ=GAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCA;MAPQ=60;MATEID=213065:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_3_196588001_196613001_4C;SPAN=318;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/0:5:70:3:0,3,181.5:5:0:3.171:8.849\n3\t197032518\t213254:1\tG\tG[3:197033039[\t39\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=CTCTTGCTGACTGGTTGGGG;MAPQ=60;MATEID=213254:2;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_3_197029001_197054001_99C;SPAN=521;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:15:37:39.2:39.2,0,52.4:8:7:-39.11:39.25\n3\t197033039\t213254:2\tC\t]3:197032518]C\t39\tPASS\tDISC_MAPQ=14;EVDNC=ASDIS;HOMSEQ=CTCTTGCTGACTGGTTGGGG;MAPQ=23;MATEID=213254:1;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_3_197029001_197054001_99C;SPAN=521;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:15:37:39.2:39.2,0,52.4:8:7:-39.11:39.25\n3\t197384100\t213329:1\tA\t]3:197384470]A\t99\tPASS\tDISC_MAPQ=53;EVDNC=ASDIS;INSERTION=TATCCGTAGTGTATTTGCGAG;MAPQ=60;MATEID=213329:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_197372001_197397001_24C;SPAN=370;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:46:104:99:122.6,0,139.1:43:8:-122.6:122.7\n3\t197384470\t213329:2\tC\tC[3:197384100[\t99\tPASS\tDISC_MAPQ=57;EVDNC=ASDIS;INSERTION=TATCCGTAGTGTATTTGCGAG;MAPQ=60;MATEID=213329:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_197372001_197397001_24C;SPAN=370;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:46:104:99:122.6,0,139.1:43:8:-122.6:122.7\n3\t197384611\t213342:1\tT\tT[3:197389970[\t67\tPASS\tDISC_MAPQ=255;EVDNC=TSI_L;HOMSEQ=GATAGTTTACTATCTGTAGTGCATTTGGGATAGT;INSERTION=GTCTGCACCACAT;MAPQ=60;MATEID=213342:2;MATENM=4;NM=7;NUMPARTS=15;SCTG=c_3_197372001_197397001_86C;SPAN=5359;SUBN=2;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:30:112:67.7:67.7,0,212.9:30:0:-67.55:71.82\n3\t197389970\t213342:2\tT\t]3:197384611]T\t67\tPASS\tDISC_MAPQ=255;EVDNC=TSI_L;HOMSEQ=GATAGTTTACTATCTGTAGTGCATTTGGGATAGT;INSERTION=GTCTGCACCACAT;MAPQ=60;MATEID=213342:1;MATENM=7;NM=4;NUMPARTS=15;SCTG=c_3_197372001_197397001_86C;SPAN=5359;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:30:112:67.7:67.7,0,212.9:30:0:-67.55:71.82\n3\t197390161\t213403:1\tT\t]3:197390694]T\t0\tPASS\tDISC_MAPQ=55;EVDNC=DSCRD;IMPRECISE;MAPQ=55;MATEID=213403:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=3:197390161(-)-3:197390694(+)__3_197372001_197397001D;SPAN=533;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/0:8:116:6:0,6,303.6:0:8:6.199:14.03\n3\t197390694\t213403:2\tA\tA[3:197390161[\t0\tPASS\tDISC_MAPQ=26;EVDNC=DSCRD;IMPRECISE;MAPQ=26;MATEID=213403:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=3:197390161(-)-3:197390694(+)__3_197372001_197397001D;SPAN=533;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/0:8:116:6:0,6,303.6:0:8:6.199:14.03\n3\t197391017\t213415:1\tT\tT[3:197391554[\t99\tPASS\tDISC_MAPQ=31;EVDNC=TSI_G;HOMSEQ=CATTTGGGATAGTTTGCTATCTGTAGCACATTTGGGATAGTTT;INSERTION=GCTATCTGTAGCACATTTGGGATAGTTTCCTA;MAPQ=20;MATEID=213415:2;MATENM=2;NM=0;NUMPARTS=4;SCTG=c_3_197372001_197397001_83C;SPAN=537;SUBN=3;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:47:152:99:112.7,0,267.8:42:8:-112.4:116\n3\t197391554\t213415:2\tT\t]3:197391017]T\t99\tPASS\tDISC_MAPQ=27;EVDNC=TSI_G;HOMSEQ=CATTTGGGATAGTTTGCTATCTGTAGCACATTTGGGATAGTTT;INSERTION=GCTATCTGTAGCACATTTGGGATAGTTTCCTA;MAPQ=31;MATEID=213415:1;MATENM=0;NM=2;NUMPARTS=4;SCTG=c_3_197372001_197397001_83C;SPAN=537;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:47:152:99:112.7,0,267.8:42:8:-112.4:116\n4\t127126\t213760:1\tA\tA[4:133267[\t23\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AA;MAPQ=60;MATEID=213760:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_4_122501_147501_96C;SPAN=6141;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:22:23.6:23.6,0,30.2:4:6:-23.53:23.59\n4\t133267\t213760:2\tA\t]4:127126]A\t23\tPASS\tDISC_MAPQ=55;EVDNC=ASDIS;HOMSEQ=AA;MAPQ=60;MATEID=213760:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_4_122501_147501_96C;SPAN=6141;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:22:23.6:23.6,0,30.2:4:6:-23.53:23.59\n4\t152957\t562623:1\tT\t[10:100092116[T\t36\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;INSERTION=C;MAPQ=60;MATEID=562623:2;MATENM=24;NM=0;NUMPARTS=2;SCTG=c_10_100082501_100107501_1C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:12:3:3.3:36.3,3.3,0:5:8:-36.31:36.31\n4\t270179\t213843:1\tC\tC[4:270450[\t62\tPASS\tEVDNC=ASSMB;HOMSEQ=AAGAATTCTCC;MAPQ=60;MATEID=213843:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_269501_294501_49C;SPAN=271;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:19:21:5.7:62.7,5.7,0:19:0:-61.54:61.54\n4\t270450\t213843:2\tA\t]4:270179]A\t62\tPASS\tEVDNC=ASSMB;HOMSEQ=AAGAATTCTCC;MAPQ=60;MATEID=213843:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_269501_294501_49C;SPAN=271;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:19:21:5.7:62.7,5.7,0:19:0:-61.54:61.54\n4\t407263\t213896:1\tG\tG[4:407581[\t15\tPASS\tEVDNC=ASSMB;HOMSEQ=AAGAATAAGGCGG;MAPQ=60;MATEID=213896:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_392001_417001_70C;SPAN=318;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:6:17:15.2:15.2,0,25.1:6:0:-15.03:15.24\n4\t407581\t213896:2\tA\t]4:407263]A\t15\tPASS\tEVDNC=ASSMB;HOMSEQ=AAGAATAAGGCGG;MAPQ=60;MATEID=213896:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_392001_417001_70C;SPAN=318;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:6:17:15.2:15.2,0,25.1:6:0:-15.03:15.24\n4\t2561244\t214587:1\tA\tA[4:2561536[\t4\tPASS\tEVDNC=ASSMB;HOMSEQ=GCCCAGGCTGGAGTGCAGTGGCGCA;MAPQ=60;MATEID=214587:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_2548001_2573001_13C;SPAN=292;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:4:32:4.4:4.4,0,73.7:4:0:-4.209:8.1\n4\t2561536\t214587:2\tG\t]4:2561244]G\t4\tPASS\tEVDNC=ASSMB;HOMSEQ=GCCCAGGCTGGAGTGCAGTGGCGCA;MAPQ=60;MATEID=214587:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_2548001_2573001_13C;SPAN=292;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:4:32:4.4:4.4,0,73.7:4:0:-4.209:8.1\n4\t3594169\t496905:1\tA\t[9:65437620[A\t23\tPASS\tDISC_MAPQ=53;EVDNC=DSCRD;IMPRECISE;MAPQ=53;MATEID=496905:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=4:3594169(-)-9:65437620(-)__9_65415001_65440001D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:8:7:2.1:23.1,2.1,0:0:8:-23.11:23.11\n4\t3814792\t214986:1\tT\t]4:3815327]T\t57\tPASS\tDISC_MAPQ=18;EVDNC=ASDIS;HOMSEQ=TATACCCACTCTATCAGGCTGTACT;MAPQ=60;MATEID=214986:2;MATENM=3;NM=91;NUMPARTS=2;SCTG=c_4_3797501_3822501_110C;SPAN=535;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:22:55:57.2:57.2,0,80.3:18:5:-57.16:57.39\n4\t3815327\t214986:2\tT\tT[4:3814792[\t57\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TATACCCACTCTATCAGGCTGTACT;MAPQ=60;MATEID=214986:1;MATENM=91;NM=3;NUMPARTS=2;SCTG=c_4_3797501_3822501_110C;SPAN=535;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:22:55:57.2:57.2,0,80.3:18:5:-57.16:57.39\n4\t4129499\t215168:1\tT\tT[4:4130496[\t24\tPASS\tDISC_MAPQ=45;EVDNC=DSCRD;IMPRECISE;MAPQ=45;MATEID=215168:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=4:4129499(+)-4:4130496(-)__4_4116001_4141001D;SPAN=997;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:18:18.2:24.8,0,18.2:0:9:-24.67:24.67\n4\t4130496\t215168:2\tA\t]4:4129499]A\t24\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=215168:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=4:4129499(+)-4:4130496(-)__4_4116001_4141001D;SPAN=997;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:18:18.2:24.8,0,18.2:0:9:-24.67:24.67\n4\t4164684\t215182:1\tT\t]4:4170704]T\t46\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=215182:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=4:4164684(-)-4:4170704(+)__4_4165001_4190001D;SPAN=6020;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:15:16:4.2:46.2,4.2,0:0:15:-46.21:46.21\n4\t4170704\t215182:2\tT\tT[4:4164684[\t46\tPASS\tDISC_MAPQ=54;EVDNC=DSCRD;IMPRECISE;MAPQ=54;MATEID=215182:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=4:4164684(-)-4:4170704(+)__4_4165001_4190001D;SPAN=6020;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:15:16:4.2:46.2,4.2,0:0:15:-46.21:46.21\n4\t4357811\t215279:1\tT\t]4:4357945]T\t30\tPASS\tEVDNC=ASSMB;HOMSEQ=TC;MAPQ=60;MATEID=215279:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_4336501_4361501_98C;SPAN=134;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:43:30.8:30.8,0,77:13:0:-30.83:31.94\n4\t4357945\t215279:2\tC\tC[4:4357811[\t30\tPASS\tEVDNC=ASSMB;HOMSEQ=TC;MAPQ=60;MATEID=215279:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_4336501_4361501_98C;SPAN=134;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:43:30.8:30.8,0,77:13:0:-30.83:31.94\n4\t6003698\t215740:1\tG\t]4:6004494]G\t59\tPASS\tDISC_MAPQ=16;EVDNC=DSCRD;IMPRECISE;MAPQ=16;MATEID=215740:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=4:6003698(-)-4:6004494(+)__4_6002501_6027501D;SPAN=796;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:20:18:5.4:59.4,5.4,0:0:20:-59.41:59.41\n4\t6004494\t215740:2\tG\tG[4:6003698[\t59\tPASS\tDISC_MAPQ=16;EVDNC=DSCRD;IMPRECISE;MAPQ=16;MATEID=215740:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=4:6003698(-)-4:6004494(+)__4_6002501_6027501D;SPAN=796;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:20:18:5.4:59.4,5.4,0:0:20:-59.41:59.41\n4\t6649866\t216000:1\tA\tA[4:6651184[\t46\tPASS\tEVDNC=ASSMB;HOMSEQ=CAGA;MAPQ=60;MATEID=216000:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_4_6639501_6664501_41C;SPAN=1318;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:14:16:4.2:46.2,4.2,0:14:0:-44.69:44.69\n4\t6651184\t216000:2\tC\t]4:6649866]C\t46\tPASS\tEVDNC=ASSMB;HOMSEQ=CAGA;MAPQ=60;MATEID=216000:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_4_6639501_6664501_41C;SPAN=1318;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:14:16:4.2:46.2,4.2,0:14:0:-44.69:44.69\n4\t7237365\t216212:1\tT\tT[4:7245647[\t28\tPASS\tEVDNC=ASSMB;HOMSEQ=TGCT;MAPQ=60;MATEID=216212:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_7227501_7252501_105C;SPAN=8282;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:29:28.1:28.1,0,44.6:11:0:-28.16:28.37\n4\t7245647\t216212:2\tT\t]4:7237365]T\t28\tPASS\tEVDNC=ASSMB;HOMSEQ=TGCT;MAPQ=60;MATEID=216212:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_7227501_7252501_105C;SPAN=8282;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:29:28.1:28.1,0,44.6:11:0:-28.16:28.37\n4\t7633785\t216329:1\tC\tC[4:7634126[\t16\tPASS\tEVDNC=ASSMB;HOMSEQ=C;MAPQ=60;MATEID=216329:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_7619501_7644501_96C;SPAN=341;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:7:25:16.1:16.1,0,45.8:7:0:-16.08:16.92\n4\t7634126\t216329:2\tC\t]4:7633785]C\t16\tPASS\tEVDNC=ASSMB;HOMSEQ=C;MAPQ=60;MATEID=216329:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_7619501_7644501_96C;SPAN=341;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:7:25:16.1:16.1,0,45.8:7:0:-16.08:16.92\n4\t9455471\t216861:1\tC\tC[4:9479875[\t29\tPASS\tDISC_MAPQ=54;EVDNC=DSCRD;IMPRECISE;MAPQ=54;MATEID=216861:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=4:9455471(+)-4:9479875(-)__4_9457001_9482001D;SPAN=24404;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:10:7:2.7:29.7,2.7,0:0:10:-29.71:29.71\n4\t9479875\t216861:2\tA\t]4:9455471]A\t29\tPASS\tDISC_MAPQ=27;EVDNC=DSCRD;IMPRECISE;MAPQ=27;MATEID=216861:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=4:9455471(+)-4:9479875(-)__4_9457001_9482001D;SPAN=24404;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:10:7:2.7:29.7,2.7,0:0:10:-29.71:29.71\n4\t10390921\t217253:1\tG\tG[4:10400557[\t85\tPASS\tDISC_MAPQ=59;EVDNC=DSCRD;IMPRECISE;MAPQ=59;MATEID=217253:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=4:10390921(+)-4:10400557(-)__4_10388001_10413001D;SPAN=9636;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:28:7:7.8:85.8,7.8,0:0:28:-85.82:85.82\n4\t10400557\t217253:2\tA\t]4:10390921]A\t85\tPASS\tDISC_MAPQ=58;EVDNC=DSCRD;IMPRECISE;MAPQ=58;MATEID=217253:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=4:10390921(+)-4:10400557(-)__4_10388001_10413001D;SPAN=9636;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:28:7:7.8:85.8,7.8,0:0:28:-85.82:85.82\n4\t10433876\t217260:1\tT\tT[4:10435083[\t7\tPASS\tEVDNC=ASSMB;HOMSEQ=TT;MAPQ=60;MATEID=217260:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_10412501_10437501_24C;SPAN=1207;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:4:22:7.1:7.1,0,46.7:4:0:-7.02:8.809\n4\t10435083\t217260:2\tT\t]4:10433876]T\t7\tPASS\tEVDNC=ASSMB;HOMSEQ=TT;MAPQ=60;MATEID=217260:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_10412501_10437501_24C;SPAN=1207;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:4:22:7.1:7.1,0,46.7:4:0:-7.02:8.809\n4\t11598244\t217597:1\tA\tA[4:11598838[\t27\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=217597:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_11588501_11613501_22C;SPAN=594;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:21:23.9:27.2,0,23.9:10:0:-27.11:27.11\n4\t11598838\t217597:2\tG\t]4:11598244]G\t27\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=217597:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_11588501_11613501_22C;SPAN=594;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:21:23.9:27.2,0,23.9:10:0:-27.11:27.11\n4\t17201142\t218948:1\tT\tT[4:17201444[\t62\tPASS\tEVDNC=ASSMB;HOMSEQ=TATCCTTTT;MAPQ=60;MATEID=218948:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_4_17199001_17224001_8C;SPAN=302;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:21:13:5.7:62.7,5.7,0:21:0:-62.72:62.72\n4\t17201444\t218948:2\tT\t]4:17201142]T\t62\tPASS\tEVDNC=ASSMB;HOMSEQ=TATCCTTTT;MAPQ=60;MATEID=218948:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_4_17199001_17224001_8C;SPAN=302;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:21:13:5.7:62.7,5.7,0:21:0:-62.72:62.72\n4\t18278640\t219210:1\tG\t]4:18409168]G\t32\tPASS\tEVDNC=ASSMB;INSERTION=CAATTTCAAGG;MAPQ=60;MATEID=219210:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_18399501_18424501_13C;SPAN=130528;SUBN=1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:15:5.6:32,0,5.6:11:0:-33.15:33.15\n4\t18409168\t219210:2\tA\tA[4:18278640[\t32\tPASS\tEVDNC=ASSMB;INSERTION=CAATTTCAAGG;MAPQ=60;MATEID=219210:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_18399501_18424501_13C;SPAN=130528;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:15:5.6:32,0,5.6:11:0:-33.15:33.15\n4\t19077842\t219355:1\tT\tT[4:19083928[\t0\tPASS\tDISC_MAPQ=57;EVDNC=ASDIS;HOMSEQ=CCACTGATTTGCTTT;MAPQ=60;MATEID=219355:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_4_19061001_19086001_22C;SPAN=6086;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/0:24:1328:99:0,293.7,3934:9:18:294.1:28.04\n4\t19083928\t219355:2\tC\t]4:19077842]C\t0\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=CCACTGATTTGCTTT;MAPQ=60;MATEID=219355:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_4_19061001_19086001_22C;SPAN=6086;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/0:24:1328:99:0,293.7,3934:9:18:294.1:28.04\n4\t19519813\t219488:2\tA\tA[1:103230510[\t75\tPASS\tDISC_MAPQ=60;EVDNC=TSI_G;HOMSEQ=ATACATACATATATATGTACATACATACATATATA;INSERTION=TATACGTACATACATACATATATACATACATATATACGTACATACATATATATGTACATACATACATACGTACATACATATATATGTACATACATACATATGTACATACATATATATGTACATACATACATAT;MAPQ=60;MATEID=219488:1;MATENM=4;NM=4;NUMPARTS=5;SCTG=c_4_19502001_19527001_23C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:25:5:6.9:75.9,6.9,0:24:5:-75.92:75.92\n4\t20376222\t219768:1\tA\t]4:20636643]A\t59\tPASS\tEVDNC=ASSMB;HOMSEQ=ATC;MAPQ=60;MATEID=219768:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_20629001_20654001_8C;SPAN=260421;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:20:11:5.4:59.4,5.4,0:20:0:-59.41:59.41\n4\t20577538\t219744:1\tG\tG[4:20601956[\t33\tPASS\tEVDNC=ASSMB;HOMSEQ=GTG;MAPQ=60;MATEID=219744:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_20580001_20605001_25C;SPAN=24418;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:22:20.3:33.5,0,20.3:12:0:-33.55:33.55\n4\t20601956\t219744:2\tG\t]4:20577538]G\t33\tPASS\tEVDNC=ASSMB;HOMSEQ=GTG;MAPQ=60;MATEID=219744:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_20580001_20605001_25C;SPAN=24418;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:22:20.3:33.5,0,20.3:12:0:-33.55:33.55\n4\t20636643\t219768:2\tC\tC[4:20376222[\t59\tPASS\tEVDNC=ASSMB;HOMSEQ=ATC;MAPQ=60;MATEID=219768:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_20629001_20654001_8C;SPAN=260421;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:20:11:5.4:59.4,5.4,0:20:0:-59.41:59.41\n4\t21159379\t219876:1\tA\tA[4:21165475[\t46\tPASS\tEVDNC=ASSMB;HOMSEQ=AGAAAATTATACTAAA;MAPQ=60;MATEID=219876:2;MATENM=0;NM=9;NUMPARTS=2;SCTG=c_4_21143501_21168501_4C;SPAN=6096;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:15:14:4.2:46.2,4.2,0:15:0:-46.21:46.21\n4\t21165475\t219876:2\tA\t]4:21159379]A\t46\tPASS\tEVDNC=ASSMB;HOMSEQ=AGAAAATTATACTAAA;MAPQ=60;MATEID=219876:1;MATENM=9;NM=0;NUMPARTS=2;SCTG=c_4_21143501_21168501_4C;SPAN=6096;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:15:14:4.2:46.2,4.2,0:15:0:-46.21:46.21\n4\t21714832\t768310:1\tT\t]16:63759379]T\t62\tPASS\tDISC_MAPQ=255;EVDNC=ASDIS;HOMSEQ=TTATTTTATTTTATTTTATTTTATTTTATTTTA;MAPQ=60;MATEID=768310:2;MATENM=10;NM=0;NUMPARTS=2;SCTG=c_16_63749001_63774001_22C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:21:16:5.7:62.7,5.7,0:19:2:-62.72:62.72\n4\t22150365\t224489:1\tC\tC[4:36380534[\t38\tPASS\tDISC_MAPQ=29;EVDNC=DSCRD;IMPRECISE;MAPQ=29;MATEID=224489:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=4:22150365(+)-4:36380534(-)__4_36358001_36383001D;SPAN=14230169;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:17:2:38.3,0,2:0:13:-39.65:39.65\n4\t22150805\t224490:1\tA\t]4:36381031]A\t19\tPASS\tDISC_MAPQ=28;EVDNC=DSCRD;IMPRECISE;MAPQ=28;MATEID=224490:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=4:22150805(-)-4:36381031(+)__4_36358001_36383001D;SPAN=14230226;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:24:19.7:19.7,0,39.5:0:8:-19.66:20.07\n4\t25495543\t221013:1\tG\tG[4:25495842[\t32\tPASS\tEVDNC=ASSMB;HOMSEQ=AAAGACAAGTGACAG;MAPQ=60;MATEID=221013:2;MATENM=0;NM=3;NUMPARTS=2;SCTG=c_4_25480001_25505001_129C;SPAN=299;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:14:2.6:32.3,0,2.6:11:0:-33.83:33.83\n4\t25495842\t221013:2\tA\t]4:25495543]A\t32\tPASS\tEVDNC=ASSMB;HOMSEQ=AAAGACAAGTGACAG;MAPQ=60;MATEID=221013:1;MATENM=3;NM=0;NUMPARTS=2;SCTG=c_4_25480001_25505001_129C;SPAN=299;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:14:2.6:32.3,0,2.6:11:0:-33.83:33.83\n4\t26526697\t221392:1\tC\tC[4:26526935[\t42\tPASS\tEVDNC=ASSMB;INSERTION=G;MAPQ=60;MATEID=221392:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_4_26509001_26534001_27C;SPAN=238;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:14:17:1.2:42.9,1.2,0:14:0:-43.71:43.71\n4\t26526935\t221392:2\tT\t]4:26526697]T\t42\tPASS\tEVDNC=ASSMB;INSERTION=G;MAPQ=60;MATEID=221392:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_4_26509001_26534001_27C;SPAN=238;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:14:17:1.2:42.9,1.2,0:14:0:-43.71:43.71\n4\t27069532\t221525:1\tC\t]4:27069662]C\t26\tPASS\tEVDNC=ASSMB;INSERTION=TAAAGACTTTG;MAPQ=60;MATEID=221525:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_27048001_27073001_3C;SPAN=130;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:47:26.6:26.6,0,89.3:12:0:-26.4:28.44\n4\t27069662\t221525:2\tC\tC[4:27069532[\t26\tPASS\tEVDNC=ASSMB;INSERTION=TAAAGACTTTG;MAPQ=60;MATEID=221525:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_27048001_27073001_3C;SPAN=130;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:47:26.6:26.6,0,89.3:12:0:-26.4:28.44\n4\t28562678\t222110:1\tC\tC[4:28562989[\t56\tPASS\tEVDNC=ASSMB;HOMSEQ=GAAATGAGTAATAC;MAPQ=60;MATEID=222110:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_4_28542501_28567501_34C;SPAN=311;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:18:21:2.4:56.1,2.4,0:18:0:-57:57\n4\t28562989\t222110:2\tG\t]4:28562678]G\t56\tPASS\tEVDNC=ASSMB;HOMSEQ=GAAATGAGTAATAC;MAPQ=60;MATEID=222110:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_4_28542501_28567501_34C;SPAN=311;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:18:21:2.4:56.1,2.4,0:18:0:-57:57\n4\t31012329\t222850:1\tT\tT[4:31013351[\t29\tPASS\tEVDNC=ASSMB;HOMSEQ=ATGT;MAPQ=60;MATEID=222850:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_30992501_31017501_9C;SPAN=1022;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:26:29:29,0,35.6:11:0:-29:29.05\n4\t31013351\t222850:2\tA\t]4:31012329]A\t29\tPASS\tEVDNC=ASSMB;HOMSEQ=ATGT;MAPQ=60;MATEID=222850:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_30992501_31017501_9C;SPAN=1022;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:26:29:29,0,35.6:11:0:-29:29.05\n4\t31405064\t223003:1\tC\tC[4:31405383[\t10\tPASS\tEVDNC=ASSMB;HOMSEQ=ATTATTTTC;MAPQ=60;MATEID=223003:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_31384501_31409501_18C;SPAN=319;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:68:10.7:10.7,0,159.2:9:0:-10.59:18.47\n4\t31405383\t223003:2\tA\t]4:31405064]A\t10\tPASS\tEVDNC=ASSMB;HOMSEQ=ATTATTTTC;MAPQ=60;MATEID=223003:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_31384501_31409501_18C;SPAN=319;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:68:10.7:10.7,0,159.2:9:0:-10.59:18.47\n4\t31840145\t223216:1\tG\t]4:31840263]G\t8\tPASS\tEVDNC=ASSMB;INSERTION=ATCTTT;MAPQ=60;MATEID=223216:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_31825501_31850501_67C;SPAN=118;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:5:31:8:8,0,67.4:5:0:-7.791:10.72\n4\t31840263\t223216:2\tG\tG[4:31840145[\t8\tPASS\tEVDNC=ASSMB;INSERTION=ATCTTT;MAPQ=60;MATEID=223216:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_31825501_31850501_67C;SPAN=118;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:5:31:8:8,0,67.4:5:0:-7.791:10.72\n4\t32103898\t223291:1\tT\t]4:32103993]T\t33\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=223291:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_32095001_32120001_79C;SPAN=95;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:33:33.8:33.8,0,47:13:0:-33.64:33.8\n4\t32103993\t223291:2\tC\tC[4:32103898[\t33\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=223291:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_32095001_32120001_79C;SPAN=95;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:33:33.8:33.8,0,47:13:0:-33.64:33.8\n4\t32964702\t223633:1\tT\t]4:33012312]T\t29\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TTTCATAT;MAPQ=60;MATEID=223633:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_33001501_33026501_98C;SPAN=47610;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:10:12:0:29.7,0,0:5:7:-31.35:31.35\n4\t33012312\t223633:2\tT\tT[4:32964702[\t29\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TTTCATAT;MAPQ=60;MATEID=223633:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_33001501_33026501_98C;SPAN=47610;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:10:12:0:29.7,0,0:5:7:-31.35:31.35\n4\t33471797\t223751:1\tA\tA[4:33472122[\t49\tPASS\tEVDNC=ASSMB;HOMSEQ=AAAATCACTGAAATA;MAPQ=60;MATEID=223751:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_33467001_33492001_61C;SPAN=325;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:16:19:1.8:49.5,1.8,0:16:0:-50.34:50.34\n4\t33472122\t223751:2\tA\t]4:33471797]A\t49\tPASS\tEVDNC=ASSMB;HOMSEQ=AAAATCACTGAAATA;MAPQ=60;MATEID=223751:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_33467001_33492001_61C;SPAN=325;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:16:19:1.8:49.5,1.8,0:16:0:-50.34:50.34\n4\t34530009\t223925:1\tC\tC[4:34530329[\t49\tPASS\tEVDNC=ASSMB;HOMSEQ=CAGGCCATTCCTTTC;MAPQ=60;MATEID=223925:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_4_34520501_34545501_89C;SPAN=320;SUBN=2;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:17:16:4.5:49.5,4.5,0:17:0:-49.51:49.51\n4\t34530329\t223925:2\tC\t]4:34530009]C\t49\tPASS\tEVDNC=ASSMB;HOMSEQ=CAGGCCATTCCTTTC;MAPQ=60;MATEID=223925:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_4_34520501_34545501_89C;SPAN=320;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:17:16:4.5:49.5,4.5,0:17:0:-49.51:49.51\n4\t36380534\t224489:2\tG\t]4:22150365]G\t38\tPASS\tDISC_MAPQ=22;EVDNC=DSCRD;IMPRECISE;MAPQ=22;MATEID=224489:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=4:22150365(+)-4:36380534(-)__4_36358001_36383001D;SPAN=14230169;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:17:2:38.3,0,2:0:13:-39.65:39.65\n4\t36381031\t224490:2\tC\tC[4:22150805[\t19\tPASS\tDISC_MAPQ=50;EVDNC=DSCRD;IMPRECISE;MAPQ=50;MATEID=224490:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=4:22150805(-)-4:36381031(+)__4_36358001_36383001D;SPAN=14230226;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:24:19.7:19.7,0,39.5:0:8:-19.66:20.07\n4\t36841138\t224648:1\tT\tT[4:36841468[\t31\tPASS\tEVDNC=ASSMB;HOMSEQ=TGGATGAATCTTCT;MAPQ=60;MATEID=224648:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_4_36823501_36848501_12C;SPAN=330;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:19:14.6:31.1,0,14.6:11:0:-31.19:31.19\n4\t36841468\t224648:2\tT\t]4:36841138]T\t31\tPASS\tEVDNC=ASSMB;HOMSEQ=TGGATGAATCTTCT;MAPQ=60;MATEID=224648:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_4_36823501_36848501_12C;SPAN=330;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:19:14.6:31.1,0,14.6:11:0:-31.19:31.19\n4\t39029470\t225324:1\tT\tT[4:39029739[\t26\tPASS\tEVDNC=ASSMB;HOMSEQ=AAGAACTAATTTTT;MAPQ=60;MATEID=225324:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_39028501_39053501_38C;SPAN=269;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:25:26:26,0,35.9:10:0:-25.98:26.09\n4\t39029739\t225324:2\tA\t]4:39029470]A\t26\tPASS\tEVDNC=ASSMB;HOMSEQ=AAGAACTAATTTTT;MAPQ=60;MATEID=225324:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_39028501_39053501_38C;SPAN=269;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:25:26:26,0,35.9:10:0:-25.98:26.09\n4\t40023395\t225782:1\tT\tT[4:40024660[\t49\tPASS\tDISC_MAPQ=54;EVDNC=DSCRD;IMPRECISE;MAPQ=54;MATEID=225782:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=4:40023395(+)-4:40024660(-)__4_40008501_40033501D;SPAN=1265;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:17:12:4.5:49.5,4.5,0:0:17:-49.51:49.51\n4\t40024660\t225782:2\tT\t]4:40023395]T\t49\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=225782:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=4:40023395(+)-4:40024660(-)__4_40008501_40033501D;SPAN=1265;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:17:12:4.5:49.5,4.5,0:0:17:-49.51:49.51\n4\t42903148\t226777:1\tT\tT[4:42903837[\t21\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=226777:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_42899501_42924501_62C;SPAN=689;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:17:18.5:21.8,0,18.5:8:0:-21.63:21.63\n4\t42903837\t226777:2\tT\t]4:42903148]T\t21\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=226777:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_42899501_42924501_62C;SPAN=689;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:17:18.5:21.8,0,18.5:8:0:-21.63:21.63\n4\t46200780\t227682:1\tC\tC[4:46203010[\t62\tPASS\tEVDNC=ASSMB;HOMSEQ=TC;MAPQ=60;MATEID=227682:2;MATENM=3;NM=2;NUMPARTS=2;SCTG=c_4_46182501_46207501_3C;SPAN=2230;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:21:10:5.7:62.7,5.7,0:21:0:-62.72:62.72\n4\t46203010\t227682:2\tT\t]4:46200780]T\t62\tPASS\tEVDNC=ASSMB;HOMSEQ=TC;MAPQ=60;MATEID=227682:1;MATENM=2;NM=3;NUMPARTS=2;SCTG=c_4_46182501_46207501_3C;SPAN=2230;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:21:10:5.7:62.7,5.7,0:21:0:-62.72:62.72\n4\t49932115\t229270:1\tT\tT[4:51702561[\t26\tPASS\tDISC_MAPQ=38;EVDNC=DSCRD;IMPRECISE;MAPQ=38;MATEID=229270:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=4:49932115(+)-4:51702561(-)__4_51695001_51720001D;SPAN=1770446;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:9:8:2.4:26.4,2.4,0:0:9:-26.41:26.41\n4\t51702561\t229270:2\tC\t]4:49932115]C\t26\tPASS\tDISC_MAPQ=37;EVDNC=DSCRD;IMPRECISE;MAPQ=37;MATEID=229270:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=4:49932115(+)-4:51702561(-)__4_51695001_51720001D;SPAN=1770446;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:9:8:2.4:26.4,2.4,0:0:9:-26.41:26.41\n4\t52081946\t229353:1\tG\t]4:52082092]G\t35\tPASS\tEVDNC=ASSMB;INSERTION=A;MAPQ=60;MATEID=229353:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_52062501_52087501_37C;SPAN=146;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:40:35:35,0,64.7:14:0:-34.97:35.49\n4\t52082092\t229353:2\tA\tA[4:52081946[\t35\tPASS\tEVDNC=ASSMB;INSERTION=A;MAPQ=60;MATEID=229353:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_52062501_52087501_37C;SPAN=146;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:40:35:35,0,64.7:14:0:-34.97:35.49\n4\t54616269\t230068:1\tC\tC[4:54616574[\t32\tPASS\tEVDNC=ASSMB;HOMSEQ=AAGAAAGCTTATTTACC;MAPQ=60;MATEID=230068:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_4_54610501_54635501_78C;SPAN=305;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:16:5.6:32,0,5.6:11:0:-32.57:32.57\n4\t54616574\t230068:2\tA\t]4:54616269]A\t32\tPASS\tEVDNC=ASSMB;HOMSEQ=AAGAAAGCTTATTTACC;MAPQ=60;MATEID=230068:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_4_54610501_54635501_78C;SPAN=305;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:16:5.6:32,0,5.6:11:0:-32.57:32.57\n4\t54942519\t230152:1\tA\tA[4:54942753[\t23\tPASS\tEVDNC=ASSMB;HOMSEQ=AAAACAAAACA;MAPQ=60;MATEID=230152:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_54929001_54954001_18C;SPAN=234;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:23:23.3:23.3,0,33.2:9:0:-23.24:23.37\n4\t54942753\t230152:2\tA\t]4:54942519]A\t23\tPASS\tEVDNC=ASSMB;HOMSEQ=AAAACAAAACA;MAPQ=60;MATEID=230152:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_54929001_54954001_18C;SPAN=234;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:23:23.3:23.3,0,33.2:9:0:-23.24:23.37\n4\t55132403\t230208:1\tT\tT[4:55132722[\t36\tPASS\tEVDNC=ASSMB;HOMSEQ=GAGGTTTAGAAAGTTT;MAPQ=60;MATEID=230208:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_55125001_55150001_117C;SPAN=319;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:12:11:3.3:36.3,3.3,0:12:0:-36.31:36.31\n4\t55132722\t230208:2\tG\t]4:55132403]G\t36\tPASS\tEVDNC=ASSMB;HOMSEQ=GAGGTTTAGAAAGTTT;MAPQ=60;MATEID=230208:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_55125001_55150001_117C;SPAN=319;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:12:11:3.3:36.3,3.3,0:12:0:-36.31:36.31\n4\t57429014\t230950:1\tG\t]4:57429550]G\t20\tPASS\tDISC_MAPQ=43;EVDNC=ASDIS;HOMSEQ=GGTTTCACCATGTTGGCCAGG;MAPQ=36;MATEID=230950:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_4_57428001_57453001_17C;SPAN=536;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:22:20.3:20.3,0,33.5:4:5:-20.22:20.45\n4\t57429550\t230950:2\tG\tG[4:57429014[\t20\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=GGTTTCACCATGTTGGCCAGG;MAPQ=60;MATEID=230950:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_4_57428001_57453001_17C;SPAN=536;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:22:20.3:20.3,0,33.5:4:5:-20.22:20.45\n4\t58562833\t231342:1\tT\t]4:58569632]T\t74\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;INSERTION=G;MAPQ=60;MATEID=231342:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_58555001_58580001_19C;SPAN=6799;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:26:40:25.1:74.6,0,25.1:18:17:-75.86:75.86\n4\t58562834\t231343:1\tT\tT[4:58569374[\t48\tPASS\tEVDNC=ASSMB;HOMSEQ=TTTT;MAPQ=60;MATEID=231343:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_58555001_58580001_47C;SPAN=6540;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:18:39:48.5:48.5,0,48.5:18:0:-48.46:48.46\n4\t58569374\t231343:2\tT\t]4:58562834]T\t48\tPASS\tEVDNC=ASSMB;HOMSEQ=TTTT;MAPQ=60;MATEID=231343:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_58555001_58580001_47C;SPAN=6540;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:18:39:48.5:48.5,0,48.5:18:0:-48.46:48.46\n4\t58569632\t231342:2\tT\tT[4:58562833[\t74\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;INSERTION=G;MAPQ=60;MATEID=231342:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_58555001_58580001_19C;SPAN=6799;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:26:40:25.1:74.6,0,25.1:18:17:-75.86:75.86\n4\t58790074\t231475:1\tA\t]4:58808344]A\t42\tPASS\tDISC_MAPQ=58;EVDNC=ASDIS;HOMSEQ=AA;MAPQ=60;MATEID=231475:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_4_58800001_58825001_79C;SPAN=18270;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:13:14:3.9:42.9,3.9,0:9:9:-42.71:42.71\n4\t58808344\t231475:2\tA\tA[4:58790074[\t42\tPASS\tDISC_MAPQ=54;EVDNC=ASDIS;HOMSEQ=AA;MAPQ=60;MATEID=231475:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_4_58800001_58825001_79C;SPAN=18270;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:13:14:3.9:42.9,3.9,0:9:9:-42.71:42.71\n4\t59078961\t231628:1\tT\tT[4:59084875[\t99\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=231628:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=4:59078961(+)-4:59084875(-)__4_59069501_59094501D;SPAN=5914;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:34:9:9.3:102.3,9.3,0:0:34:-102.3:102.3\n4\t59084875\t231628:2\tA\t]4:59078961]A\t99\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=231628:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=4:59078961(+)-4:59084875(-)__4_59069501_59094501D;SPAN=5914;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:34:9:9.3:102.3,9.3,0:0:34:-102.3:102.3\n4\t60231729\t697955:1\tT\tT[14:52425216[\t26\tPASS\tEVDNC=ASSMB;HOMSEQ=T;MAPQ=60;MATEID=697955:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_14_52405501_52430501_22C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:12:3.2:26.3,0,3.2:9:0:-27.29:27.29\n4\t60232158\t697967:1\tT\t]14:52476005]T\t22\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=T;MAPQ=60;MATEID=697967:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_52454501_52479501_37C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:25:22.7:22.7,0,39.2:7:8:-22.68:22.95\n4\t60450062\t232202:1\tT\tT]4:60454315]\t23\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=232202:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=4:60450062(+)-4:60454315(+)__4_60441501_60466501D;SPAN=4253;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:45:23.6:23.6,0,89.6:0:11:-23.66:25.82\n4\t60454315\t232202:2\tA\tA]4:60450062]\t23\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=232202:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=4:60450062(+)-4:60454315(+)__4_60441501_60466501D;SPAN=4253;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:45:23.6:23.6,0,89.6:0:11:-23.66:25.82\n4\t61073473\t232396:1\tA\tA[4:61076526[\t56\tPASS\tEVDNC=ASSMB;HOMSEQ=AA;MAPQ=60;MATEID=232396:2;MATENM=3;NM=1;NUMPARTS=2;SCTG=c_4_61054001_61079001_21C;SPAN=3053;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:19:11:5.1:56.1,5.1,0:19:0:-56.11:56.11\n4\t61076526\t232396:2\tA\t]4:61073473]A\t56\tPASS\tEVDNC=ASSMB;HOMSEQ=AA;MAPQ=60;MATEID=232396:1;MATENM=1;NM=3;NUMPARTS=2;SCTG=c_4_61054001_61079001_21C;SPAN=3053;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:19:11:5.1:56.1,5.1,0:19:0:-56.11:56.11\n4\t61162594\t232429:1\tG\tG[4:61162877[\t50\tPASS\tEVDNC=ASSMB;HOMSEQ=G;MAPQ=60;MATEID=232429:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_61152001_61177001_22C;SPAN=283;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:18:32:27.5:50.6,0,27.5:18:0:-50.7:50.7\n4\t61162877\t232429:2\tG\t]4:61162594]G\t50\tPASS\tEVDNC=ASSMB;HOMSEQ=G;MAPQ=60;MATEID=232429:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_61152001_61177001_22C;SPAN=283;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:18:32:27.5:50.6,0,27.5:18:0:-50.7:50.7\n4\t61939924\t232702:1\tT\t]9:41047840]T\t26\tPASS\tDISC_MAPQ=8;EVDNC=ASDIS;HOMSEQ=TTT;MAPQ=14;MATEID=232702:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_61936001_61961001_17C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:9:8:2.4:26.4,2.4,0:8:5:-26.41:26.41\n4\t63062069\t357378:1\tC\t[6:101065929[C\t69\tPASS\tDISC_MAPQ=54;EVDNC=ASDIS;INSERTION=TACAAACTCACTGGGAGGAA;MAPQ=60;MATEID=357378: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]4:69601740]A\t46\tPASS\tEVDNC=ASSMB;INSERTION=CAACCAGCTGGTGCTAAC;MAPQ=60;MATEID=235472:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_4_69604501_69629501_122C;SPAN=5345;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:16:5:4.2:46.2,4.2,0:16:0:-46.21:46.21\n4\t70009057\t235602:1\tG\t]4:70009155]G\t54\tPASS\tEVDNC=ASSMB;HOMSEQ=GGAAAG;MAPQ=60;MATEID=235602:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_4_69996501_70021501_59C;SPAN=98;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:21:53:54.5:54.5,0,77.6:21:0:-54.42:54.67\n4\t70009155\t235602:2\tG\tG[4:70009057[\t54\tPASS\tEVDNC=ASSMB;HOMSEQ=GGAAAG;MAPQ=60;MATEID=235602:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_4_69996501_70021501_59C;SPAN=98;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:21:53:54.5:54.5,0,77.6:21:0:-54.42:54.67\n4\t70092925\t235620:1\tA\t[Un_JTFH01000105v1_decoy:1[A\t99\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=235620:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_70070001_70095001_57C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:34:14:9.3:102.3,9.3,0:34:0:-102.3:102.3\n4\t70132919\t347771:1\tT\tT[6:69542551[\t29\tPASS\tEVDNC=ASSMB;HOMSEQ=GCT;MAPQ=60;MATEID=347771:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_69531001_69556001_22C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:13:2.9:29.3,0,2.9:10:0:-30.55:30.55\n4\t70133000\t347773:1\tA\t]6:69542531]A\t20\tPASS\tEVDNC=ASSMB;HOMSEQ=ATCCCA;MAPQ=60;MATEID=347773:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_69531001_69556001_105C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:7:10:3.8:20.3,0,3.8:7:0:-20.82:20.82\n4\t70133226\t235647:1\tC\tC[4:70133846[\t37\tPASS\tEVDNC=ASSMB;HOMSEQ=TACCC;MAPQ=60;MATEID=235647:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_4_70119001_70144001_18C;SPAN=620;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:19:8:37.7,0,8:13:0:-38.44:38.44\n4\t70133846\t235647:2\tT\t]4:70133226]T\t37\tPASS\tEVDNC=ASSMB;HOMSEQ=TACCC;MAPQ=60;MATEID=235647:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_4_70119001_70144001_18C;SPAN=620;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:19:8:37.7,0,8:13:0:-38.44:38.44\n4\t72234750\t236443:1\tG\t]4:72287710]G\t25\tPASS\tEVDNC=ASSMB;INSERTION=TGTGTGACA;MAPQ=47;MATEID=236443:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_72275001_72300001_16C;SPAN=52960;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:14:9.2:25.7,0,9.2:9:0:-26.19:26.19\n4\t72287710\t236443:2\tA\tA[4:72234750[\t25\tPASS\tEVDNC=ASSMB;INSERTION=TGTGTGACA;MAPQ=60;MATEID=236443:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_72275001_72300001_16C;SPAN=52960;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:14:9.2:25.7,0,9.2:9:0:-26.19:26.19\n4\t72965532\t236699:1\tA\tA[4:72966104[\t38\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=A;MAPQ=59;MATEID=236699:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_72961001_72986001_22C;SPAN=572;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:27:28.7:38.6,0,28.7:8:10:-38.69:38.69\n4\t72966104\t236699:2\tA\t]4:72965532]A\t38\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=A;MAPQ=60;MATEID=236699:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_72961001_72986001_22C;SPAN=572;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:27:28.7:38.6,0,28.7:8:10:-38.69:38.69\n4\t74717517\t237170:1\tT\tT[4:74723589[\t46\tPASS\tDISC_MAPQ=31;EVDNC=DSCRD;IMPRECISE;MAPQ=31;MATEID=237170:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=4:74717517(+)-4:74723589(-)__4_74700501_74725501D;SPAN=6072;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:16:6:4.2:46.2,4.2,0:0:16:-46.21:46.21\n4\t74723589\t237170:2\tC\t]4:74717517]C\t46\tPASS\tDISC_MAPQ=46;EVDNC=DSCRD;IMPRECISE;MAPQ=46;MATEID=237170:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=4:74717517(+)-4:74723589(-)__4_74700501_74725501D;SPAN=6072;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:16:6:4.2:46.2,4.2,0:0:16:-46.21:46.21\n4\t76427327\t898387:1\tA\tA[21:18857736[\t23\tPASS\tDISC_MAPQ=54;EVDNC=DSCRD;IMPRECISE;MAPQ=54;MATEID=898387:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=4:76427327(+)-21:18857736(-)__21_18840501_18865501D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:12:6.5:23,0,6.5:0:8:-23.49:23.49\n4\t79284589\t238752:1\tG\tG[4:79284903[\t66\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AAAGAATGATTGAGG;MAPQ=60;MATEID=238752:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_79282001_79307001_61C;SPAN=314;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:22:20:6:66,6,0:14:10:-66.02:66.02\n4\t79284903\t238752:2\tA\t]4:79284589]A\t66\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AAAGAATGATTGAGG;MAPQ=60;MATEID=238752:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_79282001_79307001_61C;SPAN=314;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:22:20:6:66,6,0:14:10:-66.02:66.02\n4\t79966908\t238958:1\tG\tG[4:79972938[\t33\tPASS\tEVDNC=ASSMB;HOMSEQ=AAGAATAGGGCGTCCG;MAPQ=60;MATEID=238958:2;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_4_79968001_79993001_85C;SPAN=6030;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:11:13:0.3:33,0.3,0:11:0:-34.67:34.67\n4\t79972938\t238958:2\tA\t]4:79966908]A\t33\tPASS\tEVDNC=ASSMB;HOMSEQ=AAGAATAGGGCGTCCG;MAPQ=60;MATEID=238958:1;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_4_79968001_79993001_85C;SPAN=6030;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:11:13:0.3:33,0.3,0:11:0:-34.67:34.67\n4\t79973439\t280936:1\tT\tT[5:21207604[\t99\tPASS\tDISC_MAPQ=58;EVDNC=DSCRD;IMPRECISE;MAPQ=58;MATEID=280936:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=4:79973439(+)-5:21207604(-)__5_21192501_21217501D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:34:36:9.9:108.9,9.9,0:0:34:-108.9:108.9\n4\t80381385\t239062:1\tT\tT[4:80381712[\t73\tPASS\tEVDNC=ASSMB;HOMSEQ=CATATACATTTTT;MAPQ=60;MATEID=239062:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_4_80360001_80385001_47C;SPAN=327;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:25:32:4.4:73.7,0,4.4:25:0:-76.74:76.74\n4\t80381712\t239062:2\tC\t]4:80381385]C\t73\tPASS\tEVDNC=ASSMB;HOMSEQ=CATATACATTTTT;MAPQ=60;MATEID=239062:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_4_80360001_80385001_47C;SPAN=327;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:25:32:4.4:73.7,0,4.4:25:0:-76.74:76.74\n4\t83253876\t240056:1\tT\t]4:83481515]T\t17\tPASS\tEVDNC=ASSMB;INSERTION=G;MAPQ=60;MATEID=240056:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_4_83471501_83496501_117C;SPAN=227639;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:7:22:17:17,0,36.8:7:0:-16.92:17.39\n4\t83481515\t240056:2\tT\tT[4:83253876[\t17\tPASS\tEVDNC=ASSMB;INSERTION=G;MAPQ=60;MATEID=240056:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_4_83471501_83496501_117C;SPAN=227639;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:7:22:17:17,0,36.8:7:0:-16.92:17.39\n4\t83695488\t243022:1\tA\t]4:93378383]A\t52\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=ACCTTGT;MAPQ=60;MATEID=243022:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_4_93369501_93394501_6C;SPAN=9682895;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:16:18:4.8:52.8,4.8,0:10:11:-51.41:51.41\n4\t85643235\t240634:1\tT\tT[4:85643564[\t25\tPASS\tEVDNC=ASSMB;HOMSEQ=TGT;MAPQ=60;MATEID=240634:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_85627501_85652501_117C;SPAN=329;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:17:111:25.1:25.1,0,252.8:17:0:-24.92:36.04\n4\t85643564\t240634:2\tT\t]4:85643235]T\t25\tPASS\tEVDNC=ASSMB;HOMSEQ=TGT;MAPQ=60;MATEID=240634:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_85627501_85652501_117C;SPAN=329;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:17:111:25.1:25.1,0,252.8:17:0:-24.92:36.04\n4\t87347149\t241148:1\tG\tG[4:87353146[\t50\tPASS\tDISC_MAPQ=55;EVDNC=DSCRD;IMPRECISE;MAPQ=55;MATEID=241148:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=4:87347149(+)-4:87353146(-)__4_87342501_87367501D;SPAN=5997;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:17:21:0.8:50.3,0,0.8:0:17:-52.77:52.77\n4\t87353146\t241148:2\tC\t]4:87347149]C\t50\tPASS\tDISC_MAPQ=59;EVDNC=DSCRD;IMPRECISE;MAPQ=59;MATEID=241148:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=4:87347149(+)-4:87353146(-)__4_87342501_87367501D;SPAN=5997;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:17:21:0.8:50.3,0,0.8:0:17:-52.77:52.77\n4\t87562748\t241261:1\tC\tC[4:87565161[\t95\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AAAAAGTTACAAACAAC;MAPQ=60;MATEID=241261:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_87563001_87588001_2C;SPAN=2413;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:30:32:8.7:95.7,8.7,0:16:24:-95.72:95.72\n4\t87565161\t241261:2\tA\t]4:87562748]A\t95\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AAAAAGTTACAAACAAC;MAPQ=60;MATEID=241261:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_87563001_87588001_2C;SPAN=2413;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:30:32:8.7:95.7,8.7,0:16:24:-95.72:95.72\n4\t87918124\t241445:1\tT\t]4:87922117]T\t12\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=241445:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=4:87918124(-)-4:87922117(+)__4_87906001_87931001D;SPAN=3993;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:49:12.8:12.8,0,108.5:0:8:-12.63:17.2\n4\t87922117\t241445:2\tT\tT[4:87918124[\t12\tPASS\tDISC_MAPQ=43;EVDNC=DSCRD;IMPRECISE;MAPQ=43;MATEID=241445:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=4:87918124(-)-4:87922117(+)__4_87906001_87931001D;SPAN=3993;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:49:12.8:12.8,0,108.5:0:8:-12.63:17.2\n4\t87926012\t241456:1\tT\t[4:87937548[T\t82\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;INSERTION=T;MAPQ=60;MATEID=241456:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_87930501_87955501_67C;SPAN=11536;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:27:18:7.5:82.5,7.5,0:19:14:-82.52:82.52\n4\t87937548\t241456:2\tT\t[4:87926012[T\t82\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;INSERTION=T;MAPQ=60;MATEID=241456:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_87930501_87955501_67C;SPAN=11536;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:27:18:7.5:82.5,7.5,0:19:14:-82.52:82.52\n4\t87999639\t241468:1\tA\tA[4:88000093[\t29\tPASS\tEVDNC=ASSMB;HOMSEQ=AAAAAAAAA;MAPQ=60;MATEID=241468:2;MATENM=4;NM=0;NUMPARTS=2;SCTG=c_4_87979501_88004501_147C;SPAN=454;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:25:29.3:29.3,0,32.6:11:0:-29.28:29.3\n4\t88000093\t241468:2\tA\t]4:87999639]A\t29\tPASS\tEVDNC=ASSMB;HOMSEQ=AAAAAAAAA;MAPQ=60;MATEID=241468:1;MATENM=0;NM=4;NUMPARTS=2;SCTG=c_4_87979501_88004501_147C;SPAN=454;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:25:29.3:29.3,0,32.6:11:0:-29.28:29.3\n4\t88171507\t241535:1\tA\tA[Un_KN707742v1_decoy:1[\t26\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=241535:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_88151001_88176001_126C;SPAN=-1;SUBN=2;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:13:6.2:26,0,6.2:9:0:-26.69:26.69\n4\t88760322\t241695:1\tT\tT[4:88760632[\t27\tPASS\tEVDNC=ASSMB;HOMSEQ=AGAAATGCCAAGT;MAPQ=60;MATEID=241695:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_4_88739001_88764001_2C;SPAN=310;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:20:20.9:27.5,0,20.9:10:0:-27.41:27.41\n4\t88760632\t241695:2\tA\t]4:88760322]A\t27\tPASS\tEVDNC=ASSMB;HOMSEQ=AGAAATGCCAAGT;MAPQ=60;MATEID=241695:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_4_88739001_88764001_2C;SPAN=310;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:20:20.9:27.5,0,20.9:10:0:-27.41:27.41\n4\t89152989\t242554:1\tA\t[4:91298139[A\t40\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AGT;MAPQ=60;MATEID=242554:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_91287001_91312001_23C;SPAN=2145150;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:22:13.7:40.1,0,13.7:10:6:-40.63:40.63\n4\t89522258\t242557:1\tA\tA[4:91297454[\t35\tPASS\tEVDNC=ASSMB;INSERTION=GTTT;MAPQ=60;MATEID=242557:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_91287001_91312001_35C;SPAN=1775196;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:16:2.3:35.3,0,2.3:12:0:-36.39:36.39\n4\t90179639\t242218:1\tT\t]4:90205868]T\t26\tPASS\tEVDNC=ASSMB;HOMSEQ=T;MAPQ=60;MATEID=242218:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_90184501_90209501_34C;SPAN=26229;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:24:26.3:26.3,0,32.9:10:0:-26.26:26.32\n4\t90205868\t242218:2\tT\tT[4:90179639[\t26\tPASS\tEVDNC=ASSMB;HOMSEQ=T;MAPQ=60;MATEID=242218:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_90184501_90209501_34C;SPAN=26229;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:24:26.3:26.3,0,32.9:10:0:-26.26:26.32\n4\t90473715\t242279:1\tC\tC[4:90478988[\t19\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=CTC;MAPQ=60;MATEID=242279:2;MATENM=0;NM=0;NUMPARTS=2;REPSEQ=CTCTCT;SCTG=c_4_90478501_90503501_31C;SECONDARY;SPAN=5273;SUBN=9;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:13:4.2:19.8,0,4.2:1:9:-20.4:20.4\n4\t90478988\t242279:2\tC\t]4:90473715]C\t19\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=CTC;MAPQ=0;MATEID=242279:1;MATENM=0;NM=0;NUMPARTS=2;REPSEQ=CTCTCT;SCTG=c_4_90478501_90503501_31C;SECONDARY;SPAN=5273;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:13:4.2:19.8,0,4.2:1:9:-20.4:20.4\n4\t90570520\t242324:1\tA\tA[4:90744228[\t36\tPASS\tEVDNC=ASSMB;HOMSEQ=A;MAPQ=60;MATEID=242324:2;MATENM=5;NM=0;NUMPARTS=2;SCTG=c_4_90723501_90748501_0C;SPAN=173708;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:12:2:3.3:36.3,3.3,0:12:0:-36.31:36.31\n4\t90635828\t242338:1\tC\tC[4:90816456[\t39\tPASS\tEVDNC=ASSMB;HOMSEQ=C;MAPQ=60;MATEID=242338:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_90797001_90822001_26C;SPAN=180628;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:13:15:0.9:39.6,0.9,0:13:0:-41.34:41.34\n4\t90675647\t242318:1\tT\tT[4:90681758[\t22\tPASS\tEVDNC=ASSMB;HOMSEQ=GTGTTTTTATCTT;MAPQ=60;MATEID=242318:2;MATENM=5;NM=3;NUMPARTS=2;SCTG=c_4_90674501_90699501_16C;SPAN=6111;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:15:15.5:22.1,0,15.5:8:0:-22.25:22.25\n4\t90681758\t242318:2\tG\t]4:90675647]G\t22\tPASS\tEVDNC=ASSMB;HOMSEQ=GTGTTTTTATCTT;MAPQ=60;MATEID=242318:1;MATENM=3;NM=5;NUMPARTS=2;SCTG=c_4_90674501_90699501_16C;SPAN=6111;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:15:15.5:22.1,0,15.5:8:0:-22.25:22.25\n4\t90685271\t242386:1\tC\tC[4:90934883[\t46\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;INSERTION=TAC;MAPQ=60;MATEID=242386:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_4_90919501_90944501_46C;SPAN=249612;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:16:14:4.2:46.2,4.2,0:11:10:-46.21:46.21\n4\t90744228\t242324:2\tA\t]4:90570520]A\t36\tPASS\tEVDNC=ASSMB;HOMSEQ=A;MAPQ=60;MATEID=242324:1;MATENM=0;NM=5;NUMPARTS=2;SCTG=c_4_90723501_90748501_0C;SPAN=173708;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:12:2:3.3:36.3,3.3,0:12:0:-36.31:36.31\n4\t90816456\t242338:2\tC\t]4:90635828]C\t39\tPASS\tEVDNC=ASSMB;HOMSEQ=C;MAPQ=60;MATEID=242338:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_90797001_90822001_26C;SPAN=180628;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:13:15:0.9:39.6,0.9,0:13:0:-41.34:41.34\n4\t90834186\t242353:1\tC\tC[4:90834716[\t16\tPASS\tEVDNC=ASSMB;INSERTION=TATTTTCCTTCCTAGTAC;MAPQ=60;MATEID=242353:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_4_90821501_90846501_42C;SPAN=530;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:7:24:16.4:16.4,0,42.8:7:0:-16.36:17.07\n4\t90834716\t242353:2\tT\t]4:90834186]T\t16\tPASS\tEVDNC=ASSMB;INSERTION=TATTTTCCTTCCTAGTAC;MAPQ=60;MATEID=242353:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_4_90821501_90846501_42C;SPAN=530;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:7:24:16.4:16.4,0,42.8:7:0:-16.36:17.07\n4\t90836102\t242387:1\tT\tT[4:90927944[\t29\tPASS\tEVDNC=ASSMB;HOMSEQ=TAT;MAPQ=60;MATEID=242387:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_4_90919501_90944501_12C;SPAN=91842;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:10:8:2.7:29.7,2.7,0:10:0:-29.71:29.71\n4\t90927944\t242387:2\tT\t]4:90836102]T\t29\tPASS\tEVDNC=ASSMB;HOMSEQ=TAT;MAPQ=60;MATEID=242387:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_4_90919501_90944501_12C;SPAN=91842;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:10:8:2.7:29.7,2.7,0:10:0:-29.71:29.71\n4\t90934883\t242386:2\tA\t]4:90685271]A\t46\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;INSERTION=TAC;MAPQ=60;MATEID=242386:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_4_90919501_90944501_46C;SPAN=249612;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:16:14:4.2:46.2,4.2,0:11:10:-46.21:46.21\n4\t90997734\t242586:1\tG\tG[4:91373474[\t41\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TG;MAPQ=60;MATEID=242586:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_4_91360501_91385501_11C;SPAN=375740;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:19:4.7:41,0,4.7:11:9:-42.24:42.24\n4\t91010406\t242436:1\tA\tA[4:91014686[\t32\tPASS\tEVDNC=ASSMB;HOMSEQ=A;MAPQ=60;MATEID=242436:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_4_90993001_91018001_49C;SPAN=4280;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:16:5.6:32,0,5.6:11:0:-32.57:32.57\n4\t91014686\t242436:2\tA\t]4:91010406]A\t32\tPASS\tEVDNC=ASSMB;HOMSEQ=A;MAPQ=60;MATEID=242436:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_4_90993001_91018001_49C;SPAN=4280;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:16:5.6:32,0,5.6:11:0:-32.57:32.57\n4\t91092356\t242516:1\tT\tT[4:91226523[\t39\tPASS\tEVDNC=ASSMB;HOMSEQ=CATGT;MAPQ=60;MATEID=242516:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_91213501_91238501_7C;SPAN=134167;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:13:16:0.9:39.6,0.9,0:13:0:-40.41:40.41\n4\t91154925\t242510:1\tC\tC[4:91191964[\t82\tPASS\tEVDNC=ASSMB;HOMSEQ=C;MAPQ=59;MATEID=242510:2;MATENM=8;NM=3;NUMPARTS=2;SCTG=c_4_91189001_91214001_1C;SPAN=37039;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:27:6:7.5:82.5,7.5,0:27:0:-82.52:82.52\n4\t91191964\t242510:2\tC\t]4:91154925]C\t82\tPASS\tEVDNC=ASSMB;HOMSEQ=C;MAPQ=59;MATEID=242510:1;MATENM=3;NM=8;NUMPARTS=2;SCTG=c_4_91189001_91214001_1C;SPAN=37039;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:27:6:7.5:82.5,7.5,0:27:0:-82.52:82.52\n4\t91226523\t242516:2\tC\t]4:91092356]C\t39\tPASS\tEVDNC=ASSMB;HOMSEQ=CATGT;MAPQ=60;MATEID=242516:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_91213501_91238501_7C;SPAN=134167;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:13:16:0.9:39.6,0.9,0:13:0:-40.41:40.41\n4\t91297454\t242557:2\tA\t]4:89522258]A\t35\tPASS\tEVDNC=ASSMB;INSERTION=GTTT;MAPQ=60;MATEID=242557:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_91287001_91312001_35C;SPAN=1775196;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:16:2.3:35.3,0,2.3:12:0:-36.39:36.39\n4\t91298139\t242554:2\tA\t[4:89152989[A\t40\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AGT;MAPQ=60;MATEID=242554:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_91287001_91312001_23C;SPAN=2145150;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:22:13.7:40.1,0,13.7:10:6:-40.63:40.63\n4\t91298270\t242563:1\tA\tA]4:91298737]\t23\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=242563:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=4:91298270(+)-4:91298737(+)__4_91287001_91312001D;SPAN=467;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:33:23.9:23.9,0,56.9:0:10:-23.73:24.58\n4\t91298737\t242563:2\tC\tC]4:91298270]\t23\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=242563:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=4:91298270(+)-4:91298737(+)__4_91287001_91312001D;SPAN=467;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:33:23.9:23.9,0,56.9:0:10:-23.73:24.58\n4\t91373474\t242586:2\tT\t]4:90997734]T\t41\tPASS\tDISC_MAPQ=53;EVDNC=ASDIS;HOMSEQ=TG;MAPQ=60;MATEID=242586:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_4_91360501_91385501_11C;SPAN=375740;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:19:4.7:41,0,4.7:11:9:-42.24:42.24\n4\t91668387\t242661:1\tA\t]4:132470810]A\t25\tPASS\tDISC_MAPQ=60;EVDNC=TSI_L;MAPQ=60;MATEID=242661:2;MATENM=0;NM=0;NUMPARTS=3;SCTG=c_4_91654501_91679501_22C;SPAN=40802423;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:26:25.7:25.7,0,38.9:9:3:-25.7:25.87\n4\t92646207\t242852:1\tT\t]Un_JTFH01000254v1_decoy:397]T\t89\tPASS\tEVDNC=ASSMB;HOMSEQ=TTTCT;MAPQ=60;MATEID=242852:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_92634501_92659501_23C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:27:29:8.1:89.1,8.1,0:27:0:-88.89:88.89\n4\t92647307\t242855:1\tG\tG[Un_JTFH01000254v1_decoy:1952[\t95\tPASS\tEVDNC=ASSMB;HOMSEQ=AG;MAPQ=60;MATEID=242855:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_92634501_92659501_1C;SPAN=-1;SUBN=2;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:32:22:8.7:95.7,8.7,0:32:0:-95.72:95.72\n4\t93189624\t242967:1\tT\tT[4:93191584[\t32\tPASS\tEVDNC=ASSMB;INSERTION=ATCAAATATCAAAAATCATATATCAAATATCATATATTCAAATATCACTTAGTGA;MAPQ=60;MATEID=242967:2;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_4_93173501_93198501_25C;SPAN=1960;SUBN=5;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:38:32.3:32.3,0,62:13:0:-32.23:32.79\n4\t93191584\t242967:2\tT\t]4:93189624]T\t32\tPASS\tEVDNC=ASSMB;INSERTION=ATCAAATATCAAAAATCATATATCAAATATCATATATTCAAATATCACTTAGTGA;MAPQ=60;MATEID=242967:1;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_4_93173501_93198501_25C;SPAN=1960;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:38:32.3:32.3,0,62:13:0:-32.23:32.79\n4\t93378383\t243022:2\tT\tT[4:83695488[\t52\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=ACCTTGT;MAPQ=60;MATEID=243022:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_4_93369501_93394501_6C;SPAN=9682895;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:16:18:4.8:52.8,4.8,0:10:11:-51.41:51.41\n4\t93638303\t243080:1\tT\tT[4:93644340[\t29\tPASS\tEVDNC=ASSMB;HOMSEQ=TAAAACTTGCATCTT;MAPQ=60;MATEID=243080:2;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_4_93639001_93664001_46C;SPAN=6037;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:14:5.9:29,0,5.9:10:0:-29.91:29.91\n4\t93644340\t243080:2\tT\t]4:93638303]T\t29\tPASS\tEVDNC=ASSMB;HOMSEQ=TAAAACTTGCATCTT;MAPQ=60;MATEID=243080:1;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_4_93639001_93664001_46C;SPAN=6037;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:14:5.9:29,0,5.9:10:0:-29.91:29.91\n4\t94597407\t390417:1\tT\t]7:46865077]T\t89\tPASS\tDISC_MAPQ=57;EVDNC=ASDIS;INSERTION=TTTTTTTTTTTT;MAPQ=60;MATEID=390417:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_46844001_46869001_64C;SPAN=-1;SUBN=5;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:30:36:0:89.1,0,0:10:25:-94.04:94.04\n4\t94597595\t390418:1\tC\tC[7:46865061[\t99\tPASS\tEVDNC=ASSMB;HOMSEQ=GAAGCC;MAPQ=60;MATEID=390418:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_46844001_46869001_107C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:40:30:11.1:122.1,11.1,0:40:0:-122.1:122.1\n4\t94716594\t243382:1\tT\tT[4:94717511[\t56\tPASS\tEVDNC=ASSMB;HOMSEQ=ATTTT;MAPQ=60;MATEID=243382:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_4_94717001_94742001_52C;SPAN=917;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:19:8:5.1:56.1,5.1,0:19:0:-56.11:56.11\n4\t94717511\t243382:2\tA\t]4:94716594]A\t56\tPASS\tEVDNC=ASSMB;HOMSEQ=ATTTT;MAPQ=60;MATEID=243382:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_4_94717001_94742001_52C;SPAN=917;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:19:8:5.1:56.1,5.1,0:19:0:-56.11:56.11\n4\t94949314\t243471:1\tT\tT[4:94949616[\t11\tPASS\tEVDNC=ASSMB;HOMSEQ=TGAACTCATTCTTTTTT;MAPQ=60;MATEID=243471:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_94937501_94962501_90C;SPAN=302;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:6:29:11.6:11.6,0,61.1:6:0:-11.65:13.59\n4\t94949616\t243471:2\tT\t]4:94949314]T\t11\tPASS\tEVDNC=ASSMB;HOMSEQ=TGAACTCATTCTTTTTT;MAPQ=60;MATEID=243471:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_94937501_94962501_90C;SPAN=302;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:6:29:11.6:11.6,0,61.1:6:0:-11.65:13.59\n4\t97127128\t245757:1\tC\t]4:103789730]C\t28\tPASS\tEVDNC=ASSMB;HOMSEQ=CA;MAPQ=60;MATEID=245757:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_103782001_103807001_54C;SPAN=6662602;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:15:8.9:28.7,0,8.9:10:0:-29.37:29.37\n4\t97127269\t483259:1\tA\tA[9:584229[\t30\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=A;MAPQ=60;MATEID=483259:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_563501_588501_1C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:22:23.6:30.2,0,23.6:6:5:-30.15:30.15\n4\t100380547\t161281:2\tA\t]3:47825187]A\t26\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=161281:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=3:47825187(+)-4:100380547(-)__3_47824001_47849001D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:9:5:2.4:26.4,2.4,0:0:9:-26.41:26.41\n4\t100603230\t161208:2\tC\tC[3:47737029[\t32\tPASS\tEVDNC=ASSMB;HOMSEQ=ACC;MAPQ=60;MATEID=161208:1;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_3_47726001_47751001_8C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:15:5.6:32,0,5.6:11:0:-33.15:33.15\n4\t100830780\t245066:1\tC\tC[4:100831103[\t37\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=GAC;MAPQ=60;MATEID=245066:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_100817501_100842501_163C;SPAN=323;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:19:8:37.7,0,8:11:4:-38.44:38.44\n4\t100831103\t245066:2\tG\t]4:100830780]G\t37\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=GAC;MAPQ=60;MATEID=245066:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_100817501_100842501_163C;SPAN=323;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:19:8:37.7,0,8:11:4:-38.44:38.44\n4\t102408341\t245468:1\tT\tT[4:102410994[\t33\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=245468:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=4:102408341(+)-4:102410994(-)__4_102410001_102435001D;SPAN=2653;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:10:11:3:33,3,0:0:10:-32.46:32.46\n4\t102410994\t245468:2\tC\t]4:102408341]C\t33\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=245468:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=4:102408341(+)-4:102410994(-)__4_102410001_102435001D;SPAN=2653;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:10:11:3:33,3,0:0:10:-32.46:32.46\n4\t103789730\t245757:2\tA\tA[4:97127128[\t28\tPASS\tEVDNC=ASSMB;HOMSEQ=CA;MAPQ=60;MATEID=245757:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_103782001_103807001_54C;SPAN=6662602;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:15:8.9:28.7,0,8.9:10:0:-29.37:29.37\n4\t103972889\t245845:1\tG\tG[4:103973524[\t42\tPASS\tEVDNC=ASSMB;INSERTION=TAT;MAPQ=60;MATEID=245845:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_103953501_103978501_3C;SPAN=635;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:15:25:19.4:42.5,0,19.4:15:0:-42.9:42.9\n4\t103973524\t245845:2\tT\t]4:103972889]T\t42\tPASS\tEVDNC=ASSMB;INSERTION=TAT;MAPQ=60;MATEID=245845:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_103953501_103978501_3C;SPAN=635;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:15:25:19.4:42.5,0,19.4:15:0:-42.9:42.9\n4\t105316751\t246193:1\tG\tG[4:105317024[\t85\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=246193:2;MATENM=0;NM=3;NUMPARTS=2;SCTG=c_4_105301001_105326001_127C;SPAN=273;SUBN=1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:28:19:7.8:85.8,7.8,0:28:0:-85.82:85.82\n4\t105317024\t246193:2\tA\t]4:105316751]A\t85\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=246193:1;MATENM=3;NM=0;NUMPARTS=2;SCTG=c_4_105301001_105326001_127C;SPAN=273;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:28:19:7.8:85.8,7.8,0:28:0:-85.82:85.82\n4\t105671656\t476702:1\tA\t]8:129429764]A\t57\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=A;MAPQ=60;MATEID=476702:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_129409001_129434001_125C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:20:30:17.9:57.5,0,17.9:13:9:-58.74:58.74\n4\t105671811\t489643:1\tT\tT]9:30288439]\t56\tPASS\tDISC_MAPQ=59;EVDNC=ASDIS;HOMSEQ=ATGT;MAPQ=60;MATEID=489643:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_30282001_30307001_56C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:19:10:5.1:56.1,5.1,0:14:5:-56.11:56.11\n4\t105905762\t246472:1\tT\t]4:106155800]T\t62\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;MAPQ=60;MATEID=246472:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_106134001_106159001_24C;SPAN=250038;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:21:25:0.3:62.7,0.3,0:17:11:-66.01:66.01\n4\t106135421\t246475:1\tC\tC[4:106142206[\t99\tPASS\tEVDNC=ASSMB;INSERTION=CA;MAPQ=60;MATEID=246475:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_106134001_106159001_1C;SPAN=6785;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:36:43:1.1:106.7,0,1.1:36:0:-113:113\n4\t106142206\t246475:2\tA\t]4:106135421]A\t99\tPASS\tEVDNC=ASSMB;INSERTION=CA;MAPQ=60;MATEID=246475:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_106134001_106159001_1C;SPAN=6785;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:36:43:1.1:106.7,0,1.1:36:0:-113:113\n4\t106155800\t246472:2\tG\tG[4:105905762[\t62\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;MAPQ=60;MATEID=246472:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_106134001_106159001_24C;SPAN=250038;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:21:25:0.3:62.7,0.3,0:17:11:-66.01:66.01\n4\t106683143\t246663:1\tA\tA[4:106688097[\t34\tPASS\tEVDNC=ASSMB;HOMSEQ=AATA;MAPQ=60;MATEID=246663:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_4_106673001_106698001_2C;SPAN=4954;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:29:34.7:34.7,0,38:13:0:-34.76:34.77\n4\t106688097\t246663:2\tA\t]4:106683143]A\t34\tPASS\tEVDNC=ASSMB;HOMSEQ=AATA;MAPQ=60;MATEID=246663:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_4_106673001_106698001_2C;SPAN=4954;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:29:34.7:34.7,0,38:13:0:-34.76:34.77\n4\t107206671\t246762:1\tT\tT[4:107210558[\t79\tPASS\tEVDNC=ASSMB;HOMSEQ=AAAACATTAGGATTCTCTTT;MAPQ=60;MATEID=246762:2;MATENM=3;NM=1;NUMPARTS=2;SCTG=c_4_107187501_107212501_28C;SPAN=3887;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:26:16:7.2:79.2,7.2,0:26:0:-79.22:79.22\n4\t107210558\t246762:2\tA\t]4:107206671]A\t79\tPASS\tEVDNC=ASSMB;HOMSEQ=AAAACATTAGGATTCTCTTT;MAPQ=60;MATEID=246762:1;MATENM=1;NM=3;NUMPARTS=2;SCTG=c_4_107187501_107212501_28C;SPAN=3887;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:26:16:7.2:79.2,7.2,0:26:0:-79.22:79.22\n4\t107355664\t246824:1\tC\tC[4:107358347[\t52\tPASS\tDISC_MAPQ=56;EVDNC=DSCRD;IMPRECISE;MAPQ=56;MATEID=246824:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=4:107355664(+)-4:107358347(-)__4_107334501_107359501D;SPAN=2683;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:19:38:42.2:52.1,0,42.2:0:19:-52.08:52.08\n4\t107358347\t246824:2\tA\t]4:107355664]A\t52\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=246824:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=4:107355664(+)-4:107358347(-)__4_107334501_107359501D;SPAN=2683;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:19:38:42.2:52.1,0,42.2:0:19:-52.08:52.08\n4\t108186534\t247086:1\tT\tT[4:108186820[\t39\tPASS\tEVDNC=ASSMB;HOMSEQ=AATGTTTGTATTTTTT;MAPQ=60;MATEID=247086:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_4_108167501_108192501_68C;SPAN=286;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:25:22.7:39.2,0,22.7:14:0:-39.39:39.39\n4\t108186820\t247086:2\tA\t]4:108186534]A\t39\tPASS\tEVDNC=ASSMB;HOMSEQ=AATGTTTGTATTTTTT;MAPQ=60;MATEID=247086:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_4_108167501_108192501_68C;SPAN=286;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:25:22.7:39.2,0,22.7:14:0:-39.39:39.39\n4\t109577601\t247504:1\tT\tT[4:109577910[\t99\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=GGGTACTTGAATTCTTT;MAPQ=60;MATEID=247504:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_109564001_109589001_83C;SPAN=309;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:33:25:9:99,9,0:23:12:-99.02:99.02\n4\t109577910\t247504:2\tG\t]4:109577601]G\t99\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=GGGTACTTGAATTCTTT;MAPQ=60;MATEID=247504:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_109564001_109589001_83C;SPAN=309;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:33:25:9:99,9,0:23:12:-99.02:99.02\n4\t111438522\t468851:1\tC\t]8:108770582]C\t15\tPASS\tDISC_MAPQ=54;EVDNC=DSCRD;IMPRECISE;MAPQ=54;MATEID=468851:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=4:111438522(-)-8:108770582(+)__8_108755501_108780501D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:50:15.8:15.8,0,108.2:0:9:-15.65:19.78\n4\t111533683\t248239:1\tT\t]4:111641927]T\t24\tPASS\tEVDNC=ASSMB;HOMSEQ=T;MAPQ=60;MATEID=248239:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_111622001_111647001_72C;SPAN=108244;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:29:24.8:24.8,0,47.9:10:0:-24.86:25.27\n4\t111641927\t248239:2\tT\tT[4:111533683[\t24\tPASS\tEVDNC=ASSMB;HOMSEQ=T;MAPQ=60;MATEID=248239:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_111622001_111647001_72C;SPAN=108244;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:29:24.8:24.8,0,47.9:10:0:-24.86:25.27\n4\t112548833\t248540:1\tG\tG[4:112549126[\t34\tPASS\tEVDNC=ASSMB;HOMSEQ=AAAAATGTAAAGATG;MAPQ=60;MATEID=248540:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_4_112528501_112553501_80C;SPAN=293;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:19:11.3:34.4,0,11.3:12:0:-34.76:34.76\n4\t112549126\t248540:2\tA\t]4:112548833]A\t34\tPASS\tEVDNC=ASSMB;HOMSEQ=AAAAATGTAAAGATG;MAPQ=60;MATEID=248540:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_4_112528501_112553501_80C;SPAN=293;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:19:11.3:34.4,0,11.3:12:0:-34.76:34.76\n4\t113213952\t248806:1\tT\tT[4:113214422[\t41\tPASS\tEVDNC=ASSMB;HOMSEQ=CAAAATGCTGTTTTAT;MAPQ=60;MATEID=248806:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_4_113190001_113215001_103C;SPAN=470;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:15:28:28.4:41.6,0,28.4:15:0:-41.77:41.77\n4\t113214422\t248806:2\tC\t]4:113213952]C\t41\tPASS\tEVDNC=ASSMB;HOMSEQ=CAAAATGCTGTTTTAT;MAPQ=60;MATEID=248806:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_4_113190001_113215001_103C;SPAN=470;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:15:28:28.4:41.6,0,28.4:15:0:-41.77:41.77\n4\t113796061\t252066:1\tG\t]4:124022062]G\t52\tPASS\tDISC_MAPQ=24;EVDNC=ASDIS;MAPQ=54;MATEID=252066:2;MATENM=0;NM=3;NUMPARTS=2;SCTG=c_4_124019001_124044001_132C;SPAN=10226001;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:16:18:4.8:52.8,4.8,0:11:8:-51.41:51.41\n4\t113846014\t248969:1\tG\tG]8:91873626]\t20\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=GG;MAPQ=60;MATEID=248969:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_4_113827001_113852001_31C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:33:20.6:20.6,0,60.2:7:4:-20.43:21.63\n4\t113846014\t261406:1\tG\tG[4:151810203[\t39\tPASS\tDISC_MAPQ=60;EVDNC=TSI_G;HOMSEQ=GG;INSERTION=GGTTTTCTAGATATACAATCATGTCATCTGCAAACAGGGACAATTTGACTCTTCTTTTCCTAATTGAATACCCTTTATTTCCTTCTCCTGCGTAATTGCCCTGGCCAGAACTTC;MAPQ=60;MATEID=261406:2;MATENM=0;NM=0;NUMPARTS=3;SCTG=c_4_151802001_151827001_73C;SPAN=37964189;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:24:19.7:39.5,0,19.7:11:3:-39.77:39.77\n4\t114253972\t249114:1\tA\tA[4:114262680[\t92\tPASS\tEVDNC=ASSMB;HOMSEQ=AAA;MAPQ=60;MATEID=249114:2;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_4_114243501_114268501_14C;SPAN=8708;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:31:11:8.4:92.4,8.4,0:31:0:-92.42:92.42\n4\t114262680\t249114:2\tA\t]4:114253972]A\t92\tPASS\tEVDNC=ASSMB;HOMSEQ=AAA;MAPQ=60;MATEID=249114:1;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_4_114243501_114268501_14C;SPAN=8708;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:31:11:8.4:92.4,8.4,0:31:0:-92.42:92.42\n4\t116186292\t271163:1\tG\tG[4:188802177[\t19\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=271163:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_4_188797001_188822001_5C;SPAN=72615885;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:7:3:1.8:19.8,1.8,0:7:0:-19.8:19.8\n4\t116655850\t260549:1\tA\t[4:149264903[A\t32\tPASS\tDISC_MAPQ=37;EVDNC=DSCRD;IMPRECISE;MAPQ=37;MATEID=260549:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=4:116655850(-)-4:149264903(-)__4_149254001_149279001D;SPAN=32609053;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:25:29.3:32.6,0,29.3:0:12:-32.59:32.59\n4\t116722508\t464088:1\tA\t]8:96174456]A\t44\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;MAPQ=60;MATEID=464088:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_96162501_96187501_12C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:16:28:25.1:44.9,0,25.1:10:11:-45.23:45.23\n4\t116723100\t249870:1\tT\tT]4:124757819]\t21\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=249870:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=4:116723100(+)-4:124757819(+)__4_116718001_116743001D;SPAN=8034719;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:17:18.5:21.8,0,18.5:0:8:-21.63:21.63\n4\t116923084\t13030:2\tT\t]1:53954398]T\t0\tPASS\tEVDNC=ASSMB;HOMSEQ=TATTTCAT;MAPQ=60;MATEID=13030:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_1_53949001_53974001_46C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/0:7:98:4.2:0,4.2,254.1:7:0:4.44:12.39\n4\t117217096\t485469:1\tT\t]9:10098711]T\t23\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=485469:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=4:117217096(-)-9:10098711(+)__9_10094001_10119001D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:8:7:2.1:23.1,2.1,0:0:8:-23.11:23.11\n4\t117217097\t258447:1\tA\t[4:142696557[A\t25\tPASS\tDISC_MAPQ=60;EVDNC=TSI_L;MAPQ=60;MATEID=258447:2;MATENM=0;NM=1;NUMPARTS=3;SCTG=c_4_142688001_142713001_26C;SPAN=25479460;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:28:25.1:25.1,0,44.9:9:2:-25.14:25.46\n4\t117766935\t250231:1\tT\tT[4:117767341[\t15\tPASS\tEVDNC=ASSMB;HOMSEQ=TTT;MAPQ=60;MATEID=250231:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_4_117747001_117772001_1C;SPAN=406;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:7:28:15.2:15.2,0,54.8:7:0:-15.24:16.51\n4\t117767341\t250231:2\tT\t]4:117766935]T\t15\tPASS\tEVDNC=ASSMB;HOMSEQ=TTT;MAPQ=60;MATEID=250231:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_4_117747001_117772001_1C;SPAN=406;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:7:28:15.2:15.2,0,54.8:7:0:-15.24:16.51\n4\t118375200\t250416:1\tT\tT[4:118375524[\t0\tPASS\tEVDNC=ASSMB;HOMSEQ=GTCTTTCATTGTT;MAPQ=60;MATEID=250416:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_118359501_118384501_43C;SPAN=324;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/0:13:187:9.4:0,9.4,488.5:13:0:9.651:22.85\n4\t118375524\t250416:2\tG\t]4:118375200]G\t0\tPASS\tEVDNC=ASSMB;HOMSEQ=GTCTTTCATTGTT;MAPQ=60;MATEID=250416:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_118359501_118384501_43C;SPAN=324;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/0:13:187:9.4:0,9.4,488.5:13:0:9.651:22.85\n4\t119096097\t250629:1\tA\tA[4:119096401[\t75\tPASS\tEVDNC=ASSMB;HOMSEQ=AAAAGATGCTGCAATGA;MAPQ=60;MATEID=250629:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_119094501_119119501_15C;SPAN=304;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:25:14:6.9:75.9,6.9,0:25:0:-75.92:75.92\n4\t119096401\t250629:2\tA\t]4:119096097]A\t75\tPASS\tEVDNC=ASSMB;HOMSEQ=AAAAGATGCTGCAATGA;MAPQ=60;MATEID=250629:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_119094501_119119501_15C;SPAN=304;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:25:14:6.9:75.9,6.9,0:25:0:-75.92:75.92\n4\t119106089\t250638:1\tT\tT[4:119106426[\t72\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;INSERTION=AT;MAPQ=60;MATEID=250638:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_119094501_119119501_94C;SPAN=337;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:24:19:6.6:72.6,6.6,0:21:7:-72.62:72.62\n4\t119106426\t250638:2\tG\t]4:119106089]G\t72\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;INSERTION=AT;MAPQ=60;MATEID=250638:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_119094501_119119501_94C;SPAN=337;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:24:19:6.6:72.6,6.6,0:21:7:-72.62:72.62\n4\t120165938\t250909:1\tA\tA[4:120166138[\t20\tPASS\tEVDNC=ASSMB;HOMSEQ=AGCAGA;MAPQ=60;MATEID=250909:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_120148001_120173001_66C;SPAN=200;SUBN=2;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:22:20.3:20.3,0,33.5:8:0:-20.22:20.45\n4\t120166138\t250909:2\tA\t]4:120165938]A\t20\tPASS\tEVDNC=ASSMB;HOMSEQ=AGCAGA;MAPQ=60;MATEID=250909:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_120148001_120173001_66C;SPAN=200;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:22:20.3:20.3,0,33.5:8:0:-20.22:20.45\n4\t120167449\t250918:1\tA\t]4:120175328]A\t19\tPASS\tEVDNC=ASSMB;HOMSEQ=AT;MAPQ=60;MATEID=250918:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_120172501_120197501_1C;SPAN=7879;SUBN=2;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:7:13:12.8:19.4,0,12.8:7:0:-19.51:19.51\n4\t120175328\t250918:2\tT\tT[4:120167449[\t19\tPASS\tEVDNC=ASSMB;HOMSEQ=AT;MAPQ=60;MATEID=250918:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_120172501_120197501_1C;SPAN=7879;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:7:13:12.8:19.4,0,12.8:7:0:-19.51:19.51\n4\t120887787\t251139:1\tT\tT[4:120888092[\t27\tPASS\tEVDNC=ASSMB;HOMSEQ=GACATTTTATCCT;MAPQ=60;MATEID=251139:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_4_120883001_120908001_97C;SPAN=305;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:21:23.9:27.2,0,23.9:10:0:-27.11:27.11\n4\t120888092\t251139:2\tG\t]4:120887787]G\t27\tPASS\tEVDNC=ASSMB;HOMSEQ=GACATTTTATCCT;MAPQ=60;MATEID=251139:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_4_120883001_120908001_97C;SPAN=305;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:21:23.9:27.2,0,23.9:10:0:-27.11:27.11\n4\t122720683\t469240:1\tA\t]8:109517001]A\t28\tPASS\tEVDNC=ASSMB;HOMSEQ=A;MAPQ=60;MATEID=469240:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_109515001_109540001_59C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:53:28.1:28.1,0,104:13:0:-28.02:30.54\n4\t122721082\t262618:1\tA\tA[4:155292496[\t34\tPASS\tEVDNC=ASSMB;HOMSEQ=A;MAPQ=60;MATEID=262618:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_155281001_155306001_83C;SPAN=32571414;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:29:34.7:34.7,0,38:13:0:-34.76:34.77\n4\t123908850\t252028:1\tA\t]4:123909098]A\t19\tPASS\tEVDNC=ASSMB;INSERTION=CAGTGGCAATTC;MAPQ=60;MATEID=252028:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_4_123896501_123921501_67C;SPAN=248;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:49:19.4:19.4,0,101.9:10:0:-19.24:22.58\n4\t123909098\t252028:2\tC\tC[4:123908850[\t19\tPASS\tEVDNC=ASSMB;INSERTION=CAGTGGCAATTC;MAPQ=60;MATEID=252028:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_4_123896501_123921501_67C;SPAN=248;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:49:19.4:19.4,0,101.9:10:0:-19.24:22.58\n4\t124019638\t459008:1\tA\t]8:78595007]A\t49\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AT;MAPQ=60;MATEID=459008:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_78571501_78596501_14C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:15:17:4.5:49.5,4.5,0:12:8:-48.04:48.04\n4\t124022062\t252066:2\tT\tT[4:113796061[\t52\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;MAPQ=60;MATEID=252066:1;MATENM=3;NM=0;NUMPARTS=2;SCTG=c_4_124019001_124044001_132C;SPAN=10226001;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:16:18:4.8:52.8,4.8,0:11:8:-51.41:51.41\n4\t124022412\t252074:1\tT\tT[4:124024032[\t56\tPASS\tEVDNC=ASSMB;HOMSEQ=CATTACATACTTTAT;MAPQ=60;MATEID=252074:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_124019001_124044001_143C;SPAN=1620;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:19:23:0.2:56.3,0,0.2:19:0:-59.38:59.38\n4\t124024032\t252074:2\tC\t]4:124022412]C\t56\tPASS\tEVDNC=ASSMB;HOMSEQ=CATTACATACTTTAT;MAPQ=60;MATEID=252074:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_124019001_124044001_143C;SPAN=1620;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:19:23:0.2:56.3,0,0.2:19:0:-59.38:59.38\n4\t124756824\t257428:1\tC\t[4:139693884[C\t82\tPASS\tDISC_MAPQ=60;EVDNC=TSI_G;HOMSEQ=AGGA;INSERTION=ACTCTTGTCCTTATTATTTCAGCTTGGCTAAAAGCCGTATTCCTTGTATGCTTTTATTGTTTTTCTGGTTCAACAAC;MAPQ=60;MATEID=257428:2;MATENM=0;NM=0;NUMPARTS=3;SCTG=c_4_139674501_139699501_7C;SPAN=14937060;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:25:27:7.5:82.5,7.5,0:22:6:-81.99:81.99\n4\t124756824\t489646:1\tC\t[9:30288228[C\t34\tPASS\tDISC_MAPQ=60;EVDNC=TSI_L;HOMSEQ=AGGA;INSERTION=AAC;MAPQ=60;MATEID=489646:2;MATENM=0;NM=0;NUMPARTS=3;REPSEQ=CAACAA;SCTG=c_9_30282001_30307001_59C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:16:25:11.3:34.7,0,11.3:16:2:-35.31:35.31\n4\t124757819\t249870:2\tA\tA]4:116723100]\t21\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=249870:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=4:116723100(+)-4:124757819(+)__4_116718001_116743001D;SPAN=8034719;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:17:18.5:21.8,0,18.5:0:8:-21.63:21.63\n4\t124870323\t252421:1\tC\t]4:125017418]C\t39\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=C;MAPQ=60;MATEID=252421:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_4_124999001_125024001_5C;SPAN=147095;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:24:19.7:39.5,0,19.7:10:9:-39.77:39.77\n4\t125017418\t252421:2\tC\tC[4:124870323[\t39\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=C;MAPQ=60;MATEID=252421:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_4_124999001_125024001_5C;SPAN=147095;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:24:19.7:39.5,0,19.7:10:9:-39.77:39.77\n4\t126064282\t476707:1\tT\t[8:129429474[T\t40\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=T;MAPQ=60;MATEID=476707:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_129409001_129434001_74C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:15:34:40.1:40.1,0,43.4:13:3:-39.96:39.98\n4\t127522065\t254786:1\tT\t]4:132470810]T\t41\tPASS\tDISC_MAPQ=255;EVDNC=TSI_G;HOMSEQ=T;INSERTION=AGAGTTACAGCATGAGAATTGCATAAACATTGCAAATGCAAAGAAGGACATGTTATTTGCTCCAAGATAGCAGAGATTTCTCCTAGCA;MAPQ=60;MATEID=254786:2;MATENM=0;NM=0;NUMPARTS=3;SCTG=c_4_132447001_132472001_15C;SPAN=4948745;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:18:1.7:41.3,0,1.7:14:0:-42.92:42.92\n4\t127522207\t475363:1\tT\tT[8:126114017[\t20\tPASS\tEVDNC=ASSMB;HOMSEQ=CAT;MAPQ=60;MATEID=475363:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_126101501_126126501_8C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:35:20:20,0,66.2:9:0:-19.87:21.36\n4\t127800198\t261761:1\tC\t[4:152998534[C\t62\tPASS\tDISC_MAPQ=52;EVDNC=ASDIS;INSERTION=TTAATTAA;MAPQ=60;MATEID=261761:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_4_152978001_153003001_10C;SPAN=25198336;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:19:21:5.7:62.7,5.7,0:13:11:-61.54:61.54\n4\t129984083\t254011:1\tA\t]4:130048236]A\t27\tPASS\tEVDNC=ASSMB;INSERTION=TGTTGGAAAAAAT;MAPQ=60;MATEID=254011:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_130046001_130071001_25C;SPAN=64153;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:20:20.9:27.5,0,20.9:10:0:-27.41:27.41\n4\t130048236\t254011:2\tG\tG[4:129984083[\t27\tPASS\tEVDNC=ASSMB;INSERTION=TGTTGGAAAAAAT;MAPQ=48;MATEID=254011:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_130046001_130071001_25C;SPAN=64153;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:20:20.9:27.5,0,20.9:10:0:-27.41:27.41\n4\t130410267\t600538:1\tA\t]11:86686540]A\t30\tPASS\tDISC_MAPQ=21;EVDNC=DSCRD;IMPRECISE;MAPQ=21;MATEID=600538:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=4:130410267(-)-11:86686540(+)__11_86681001_86706001D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:22:23.6:30.2,0,23.6:0:11:-30.15:30.15\n4\t130736338\t254250:1\tA\t]4:130736502]A\t33\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=254250:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_130732001_130757001_16C;SPAN=164;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:44:33.8:33.8,0,76.7:14:0:-33.85:34.77\n4\t130736502\t254250:2\tA\tA[4:130736338[\t33\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=254250:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_130732001_130757001_16C;SPAN=164;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:44:33.8:33.8,0,76.7:14:0:-33.85:34.77\n4\t132259629\t254724:1\tT\tT[4:132261800[\t56\tPASS\tDISC_MAPQ=29;EVDNC=DSCRD;IMPRECISE;MAPQ=29;MATEID=254724:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=4:132259629(+)-4:132261800(-)__4_132251001_132276001D;SPAN=2171;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:19:7:5.1:56.1,5.1,0:0:19:-56.11:56.11\n4\t132261800\t254724:2\tG\t]4:132259629]G\t56\tPASS\tDISC_MAPQ=44;EVDNC=DSCRD;IMPRECISE;MAPQ=44;MATEID=254724:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=4:132259629(+)-4:132261800(-)__4_132251001_132276001D;SPAN=2171;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:19:7:5.1:56.1,5.1,0:0:19:-56.11:56.11\n4\t132470632\t259250:1\tA\t[4:145607336[A\t34\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;INSERTION=TCTAACCCAGACTA;MAPQ=60;MATEID=259250:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_4_145603501_145628501_39C;SPAN=13136704;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:19:11.3:34.4,0,11.3:7:6:-34.76:34.76\n4\t132470810\t254786:2\tA\tA[4:127522065[\t41\tPASS\tDISC_MAPQ=255;EVDNC=TSI_G;HOMSEQ=T;INSERTION=AGAGTTACAGCATGAGAATTGCATAAACATTGCAAATGCAAAGAAGGACATGTTATTTGCTCCAAGATAGCAGAGATTTCTCCTAGCA;MAPQ=60;MATEID=254786:1;MATENM=0;NM=0;NUMPARTS=3;SCTG=c_4_132447001_132472001_15C;SPAN=4948745;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:18:1.7:41.3,0,1.7:14:0:-42.92:42.92\n4\t132470810\t242661:2\tA\tA[4:91668387[\t25\tPASS\tDISC_MAPQ=60;EVDNC=TSI_L;MAPQ=60;MATEID=242661:1;MATENM=0;NM=0;NUMPARTS=3;SCTG=c_4_91654501_91679501_22C;SPAN=40802423;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:26:25.7:25.7,0,38.9:9:3:-25.7:25.87\n4\t132524277\t254804:1\tA\tA[4:132524547[\t49\tPASS\tEVDNC=ASSMB;HOMSEQ=A;MAPQ=60;MATEID=254804:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_132520501_132545501_115C;SPAN=270;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:17:23:6.8:49.7,0,6.8:17:0:-51.34:51.34\n4\t132524547\t254804:2\tA\t]4:132524277]A\t49\tPASS\tEVDNC=ASSMB;HOMSEQ=A;MAPQ=60;MATEID=254804:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_132520501_132545501_115C;SPAN=270;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:17:23:6.8:49.7,0,6.8:17:0:-51.34:51.34\n4\t132747922\t261326:1\tC\t[4:151538082[C\t67\tPASS\tDISC_MAPQ=57;EVDNC=TSI_G;HOMSEQ=AG;INSERTION=TGGGAAGCAGGGAATTGCTGCTGGAAAGACAACCAGATCATGTCTGCCATAGTGCTCAAAGAAAAATAATTTTAAAGTTACAGAAA;MAPQ=60;MATEID=261326:2;MATENM=0;NM=0;NUMPARTS=3;SCTG=c_4_151532501_151557501_28C;SPAN=18790160;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:23:30:8:67.4,0,8:16:10:-70.2:70.2\n4\t133109854\t255045:1\tT\t]4:133181023]T\t34\tPASS\tEVDNC=ASSMB;HOMSEQ=T;MAPQ=60;MATEID=255045:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_133157501_133182501_52C;SPAN=71169;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:20:14.3:34.1,0,14.3:12:0:-34.32:34.32\n4\t133181023\t255045:2\tT\tT[4:133109854[\t34\tPASS\tEVDNC=ASSMB;HOMSEQ=T;MAPQ=60;MATEID=255045:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_133157501_133182501_52C;SPAN=71169;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:20:14.3:34.1,0,14.3:12:0:-34.32:34.32\n4\t133374405\t255133:1\tT\tT[4:133374709[\t59\tPASS\tEVDNC=ASSMB;HOMSEQ=ATAAATTTGTATTTTTT;MAPQ=60;MATEID=255133:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_133353501_133378501_4C;SPAN=304;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:19:22:2.7:59.4,2.7,0:19:0:-60.34:60.34\n4\t133374709\t255133:2\tA\t]4:133374405]A\t59\tPASS\tEVDNC=ASSMB;HOMSEQ=ATAAATTTGTATTTTTT;MAPQ=60;MATEID=255133:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_133353501_133378501_4C;SPAN=304;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:19:22:2.7:59.4,2.7,0:19:0:-60.34:60.34\n4\t133589596\t480393:1\tC\t[8:138632595[C\t17\tPASS\tDISC_MAPQ=56;EVDNC=ASDIS;HOMSEQ=C;MAPQ=60;MATEID=480393:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_8_138621001_138646001_7C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:32:17.6:17.6,0,60.5:6:3:-17.41:18.87\n4\t133589882\t255192:1\tG\tG]6:35915816]\t22\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=255192:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=4:133589882(+)-6:35915816(+)__4_133574001_133599001D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:15:15.5:22.1,0,15.5:0:8:-22.25:22.25\n4\t134233891\t255396:1\tA\t[4:134237140[A\t52\tPASS\tDISC_MAPQ=44;EVDNC=ASDIS;INSERTION=ACTTTATACAAATGGAGAA;MAPQ=60;MATEID=255396:2;MATENM=0;NM=4;NUMPARTS=2;SCTG=c_4_134235501_134260501_0C;SPAN=3249;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:18:26:12.5:52.1,0,12.5:14:9:-53.39:53.39\n4\t134237140\t255396:2\tT\t[4:134233891[T\t52\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;INSERTION=ACTTTATACAAATGGAGAA;MAPQ=60;MATEID=255396:1;MATENM=4;NM=0;NUMPARTS=2;SCTG=c_4_134235501_134260501_0C;SPAN=3249;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:18:26:12.5:52.1,0,12.5:14:9:-53.39:53.39\n4\t134345929\t255721:1\tG\t]4:134988026]G\t16\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=255721:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_134970501_134995501_166C;SPAN=642097;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:7:25:16.1:16.1,0,45.8:7:0:-16.08:16.92\n4\t134511847\t255539:1\tA\tA[4:134514547[\t44\tPASS\tEVDNC=ASSMB;INSERTION=GTACA;MAPQ=60;MATEID=255539:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_134505001_134530001_17C;SPAN=2700;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:17:40:44.9:44.9,0,54.8:17:0:-44.87:44.94\n4\t134514547\t255539:2\tT\t]4:134511847]T\t44\tPASS\tEVDNC=ASSMB;INSERTION=GTACA;MAPQ=60;MATEID=255539:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_134505001_134530001_17C;SPAN=2700;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:17:40:44.9:44.9,0,54.8:17:0:-44.87:44.94\n4\t134969975\t259711:1\tG\t[4:147282100[G\t46\tPASS\tDISC_MAPQ=255;EVDNC=ASDIS;INSERTION=AATGAG;MAPQ=60;MATEID=259711:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_147269501_147294501_1C;SPAN=12312125;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:16:24:13.1:46.1,0,13.1:9:12:-46.99:46.99\n4\t134988026\t255721:2\tG\tG[4:134345929[\t16\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=255721:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_134970501_134995501_166C;SPAN=642097;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:7:25:16.1:16.1,0,45.8:7:0:-16.08:16.92\n4\t135006396\t255745:1\tG\tG[4:135006703[\t82\tPASS\tEVDNC=ASSMB;HOMSEQ=AAAACTGCTATACAG;MAPQ=60;MATEID=255745:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_134995001_135020001_94C;SPAN=307;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:27:32:2.1:82.5,2.1,0:27:0:-85.01:85.01\n4\t135006703\t255745:2\tA\t]4:135006396]A\t82\tPASS\tEVDNC=ASSMB;HOMSEQ=AAAACTGCTATACAG;MAPQ=60;MATEID=255745:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_134995001_135020001_94C;SPAN=307;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:27:32:2.1:82.5,2.1,0:27:0:-85.01:85.01\n4\t135169406\t505978:1\tT\t[9:94543397[T\t22\tPASS\tDISC_MAPQ=21;EVDNC=DSCRD;IMPRECISE;MAPQ=21;MATEID=505978:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=4:135169406(-)-9:94543397(-)__9_94521001_94546001D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:14:12.5:22.4,0,12.5:0:8:-22.62:22.62\n4\t135304935\t692387:1\tA\tA[14:37047457[\t21\tPASS\tEVDNC=ASSMB;INSERTION=TG;MAPQ=60;MATEID=692387:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_37044001_37069001_19C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:17:18.5:21.8,0,18.5:8:0:-21.63:21.63\n4\t137443236\t262665:1\tA\t[4:155418929[A\t17\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;MAPQ=60;MATEID=262665:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_155403501_155428501_47C;SPAN=17975693;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:7:19:17.9:17.9,0,27.8:6:2:-17.77:17.94\n4\t138045057\t256843:1\tG\tG[4:138046065[\t99\tPASS\tEVDNC=ASSMB;INSERTION=T;MAPQ=60;MATEID=256843:2;MATENM=3;NM=9;NUMPARTS=2;SCTG=c_4_138033001_138058001_16C;SPAN=1008;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:48:24:13.2:145.2,13.2,0:48:0:-145.2:145.2\n4\t138046065\t256843:2\tA\t]4:138045057]A\t99\tPASS\tEVDNC=ASSMB;INSERTION=T;MAPQ=60;MATEID=256843:1;MATENM=9;NM=3;NUMPARTS=2;SCTG=c_4_138033001_138058001_16C;SPAN=1008;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:48:24:13.2:145.2,13.2,0:48:0:-145.2:145.2\n4\t138547813\t257017:1\tA\tA[4:138552061[\t61\tPASS\tDISC_MAPQ=52;EVDNC=DSCRD;IMPRECISE;MAPQ=52;MATEID=257017:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=4:138547813(+)-4:138552061(-)__4_138547501_138572501D;SPAN=4248;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:41:263:61.6:61.6,0,599.6:0:41:-61.41:87.27\n4\t138552061\t257017:2\tA\t]4:138547813]A\t61\tPASS\tDISC_MAPQ=50;EVDNC=DSCRD;IMPRECISE;MAPQ=50;MATEID=257017:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=4:138547813(+)-4:138552061(-)__4_138547501_138572501D;SPAN=4248;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:41:263:61.6:61.6,0,599.6:0:41:-61.41:87.27\n4\t139693884\t257428:2\tT\t[4:124756824[T\t82\tPASS\tDISC_MAPQ=60;EVDNC=TSI_G;HOMSEQ=AGGA;INSERTION=ACTCTTGTCCTTATTATTTCAGCTTGGCTAAAAGCCGTATTCCTTGTATGCTTTTATTGTTTTTCTGGTTCAACAAC;MAPQ=60;MATEID=257428:1;MATENM=0;NM=0;NUMPARTS=3;SCTG=c_4_139674501_139699501_7C;SPAN=14937060;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:25:27:7.5:82.5,7.5,0:22:6:-81.99:81.99\n4\t139694008\t464091:1\tA\tA[8:96173027[\t31\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=464091:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_96162501_96187501_54C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:17:8.6:31.7,0,8.6:11:0:-32.06:32.06\n4\t139733131\t477489:1\tG\t]8:131152906]G\t31\tPASS\tEVDNC=ASSMB;INSERTION=ATCTGCATTTTT;MAPQ=60;MATEID=477489:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_131148501_131173501_29C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:31:31.1:31.1,0,44.3:12:0:-30.9:31.08\n4\t139735224\t257457:1\tT\tT[4:153212136[\t23\tPASS\tEVDNC=ASSMB;HOMSEQ=T;MAPQ=60;MATEID=257457:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_139723501_139748501_83C;SPAN=13476912;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:7:8:2.1:23.1,2.1,0:7:0:-22.34:22.34\n4\t139854667\t257492:1\tC\t]4:139854797]C\t23\tPASS\tEVDNC=ASSMB;INSERTION=GCTCTC;MAPQ=60;MATEID=257492:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_139846001_139871001_88C;SPAN=130;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:58:23.3:23.3,0,122.3:12:0:-23.31:27.18\n4\t139854797\t257492:2\tC\tC[4:139854667[\t23\tPASS\tEVDNC=ASSMB;INSERTION=GCTCTC;MAPQ=60;MATEID=257492:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_139846001_139871001_88C;SPAN=130;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:58:23.3:23.3,0,122.3:12:0:-23.31:27.18\n4\t140519225\t257763:1\tC\tC[4:140520652[\t31\tPASS\tDISC_MAPQ=24;EVDNC=DSCRD;IMPRECISE;MAPQ=24;MATEID=257763:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=4:140519225(+)-4:140520652(-)__4_140507501_140532501D;SPAN=1427;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:31:31.1:31.1,0,44.3:0:12:-30.9:31.08\n4\t140520652\t257763:2\tA\t]4:140519225]A\t31\tPASS\tDISC_MAPQ=28;EVDNC=DSCRD;IMPRECISE;MAPQ=28;MATEID=257763:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=4:140519225(+)-4:140520652(-)__4_140507501_140532501D;SPAN=1427;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:31:31.1:31.1,0,44.3:0:12:-30.9:31.08\n4\t141260745\t479452:1\tG\t]8:136646564]G\t24\tPASS\tDISC_MAPQ=55;EVDNC=ASDIS;HOMSEQ=GAC;MAPQ=60;MATEID=479452:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_136636501_136661501_40C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:29:24.8:24.8,0,47.9:8:5:-24.86:25.27\n4\t141260902\t464688:1\tT\tT]8:98214711]\t27\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;INSERTION=AA;MAPQ=60;MATEID=464688:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_98196001_98221001_19C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:21:23.9:27.2,0,23.9:9:2:-27.11:27.11\n4\t141309629\t258016:1\tC\tC[4:141311909[\t60\tPASS\tEVDNC=ASSMB;HOMSEQ=GAGCC;MAPQ=60;MATEID=258016:2;MATENM=0;NM=3;NUMPARTS=2;SCTG=c_4_141291501_141316501_90C;SPAN=2280;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:21:30:14.6:60.8,0,14.6:21:0:-62.47:62.47\n4\t141311909\t258016:2\tG\t]4:141309629]G\t60\tPASS\tEVDNC=ASSMB;HOMSEQ=GAGCC;MAPQ=60;MATEID=258016:1;MATENM=3;NM=0;NUMPARTS=2;SCTG=c_4_141291501_141316501_90C;SPAN=2280;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:21:30:14.6:60.8,0,14.6:21:0:-62.47:62.47\n4\t141316353\t262006:1\tT\tT[4:153664092[\t23\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=262006:2;MATENM=1;NM=2;NUMPARTS=2;SCTG=c_4_153664001_153689001_70C;SPAN=12347739;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:34:23.6:23.6,0,59.9:10:0:-23.45:24.42\n4\t142164895\t258336:1\tT\t]4:142303352]T\t41\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=T;MAPQ=60;MATEID=258336:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_142296001_142321001_119C;SPAN=138457;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:15:31:34.4:41,0,34.4:11:10:-40.81:40.81\n4\t142231121\t258349:1\tC\t]4:142332597]C\t26\tPASS\tEVDNC=ASSMB;HOMSEQ=CA;MAPQ=60;MATEID=258349:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_4_142320501_142345501_26C;SPAN=101476;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:22:26.9:26.9,0,26.9:10:0:-26.83:26.83\n4\t142303352\t258336:2\tT\tT[4:142164895[\t41\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=T;MAPQ=60;MATEID=258336:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_142296001_142321001_119C;SPAN=138457;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:15:31:34.4:41,0,34.4:11:10:-40.81:40.81\n4\t142332597\t258349:2\tA\tA[4:142231121[\t26\tPASS\tEVDNC=ASSMB;HOMSEQ=CA;MAPQ=60;MATEID=258349:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_4_142320501_142345501_26C;SPAN=101476;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:22:26.9:26.9,0,26.9:10:0:-26.83:26.83\n4\t142696529\t479453:1\tC\t[8:136645913[C\t26\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=CT;MAPQ=60;MATEID=479453:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_136636501_136661501_10C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:24:26.3:26.3,0,32.9:10:2:-26.26:26.32\n4\t142696557\t258447:2\tC\t[4:117217097[C\t25\tPASS\tDISC_MAPQ=60;EVDNC=TSI_L;MAPQ=60;MATEID=258447:1;MATENM=1;NM=0;NUMPARTS=3;SCTG=c_4_142688001_142713001_26C;SPAN=25479460;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:28:25.1:25.1,0,44.9:9:2:-25.14:25.46\n4\t143652148\t258707:1\tT\tT[4:143652462[\t41\tPASS\tEVDNC=ASSMB;HOMSEQ=CTTTTTCCTTTCTT;MAPQ=60;MATEID=258707:2;MATENM=0;NM=6;NUMPARTS=2;SCTG=c_4_143643501_143668501_119C;SPAN=314;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:15:27:25.4:41.9,0,25.4:15:0:-42.12:42.12\n4\t143652462\t258707:2\tC\t]4:143652148]C\t41\tPASS\tEVDNC=ASSMB;HOMSEQ=CTTTTTCCTTTCTT;MAPQ=60;MATEID=258707:1;MATENM=6;NM=0;NUMPARTS=2;SCTG=c_4_143643501_143668501_119C;SPAN=314;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:15:27:25.4:41.9,0,25.4:15:0:-42.12:42.12\n4\t144395295\t258967:1\tC\tC[4:144398754[\t99\tPASS\tDISC_MAPQ=31;EVDNC=ASDIS;HOMSEQ=AC;MAPQ=26;MATEID=258967:2;MATENM=34;NM=1;NUMPARTS=2;SCTG=c_4_144378501_144403501_5C;SPAN=3459;SUBN=1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:65:19:18:198,18,0:47:32:-198:198\n4\t144398754\t258967:2\tA\t]4:144395295]A\t99\tPASS\tDISC_MAPQ=57;EVDNC=ASDIS;HOMSEQ=AC;MAPQ=60;MATEID=258967:1;MATENM=1;NM=34;NUMPARTS=2;SCTG=c_4_144378501_144403501_5C;SPAN=3459;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:65:19:18:198,18,0:47:32:-198:198\n4\t145517661\t259212:1\tA\tA[4:145519299[\t37\tPASS\tEVDNC=ASSMB;HOMSEQ=TTGGCCA;MAPQ=60;MATEID=259212:2;MATENM=9;NM=0;NUMPARTS=2;SCTG=c_4_145505501_145530501_34C;SPAN=1638;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:31:37.7:37.7,0,37.7:14:0:-37.5:37.51\n4\t145519299\t259212:2\tT\t]4:145517661]T\t37\tPASS\tEVDNC=ASSMB;HOMSEQ=TTGGCCA;MAPQ=60;MATEID=259212:1;MATENM=0;NM=9;NUMPARTS=2;SCTG=c_4_145505501_145530501_34C;SPAN=1638;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:31:37.7:37.7,0,37.7:14:0:-37.5:37.51\n4\t145607336\t259250:2\tG\t[4:132470632[G\t34\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;INSERTION=TCTAACCCAGACTA;MAPQ=60;MATEID=259250:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_4_145603501_145628501_39C;SPAN=13136704;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:19:11.3:34.4,0,11.3:7:6:-34.76:34.76\n4\t145607589\t489652:1\tG\tG[9:30288138[\t40\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=489652:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_30282001_30307001_41C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:22:13.7:40.1,0,13.7:14:0:-40.63:40.63\n4\t145607890\t479457:1\tT\tT[8:136646252[\t16\tPASS\tDISC_MAPQ=37;EVDNC=DSCRD;IMPRECISE;MAPQ=37;MATEID=479457:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=4:145607890(+)-8:136646252(-)__8_136636501_136661501D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:36:16.4:16.4,0,72.5:0:8:-16.29:18.4\n4\t145998429\t259347:1\tT\tT[4:146006589[\t99\tPASS\tEVDNC=ASSMB;HOMSEQ=CTT;MAPQ=60;MATEID=259347:2;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_4_145995501_146020501_17C;SPAN=8160;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:41:17:11.4:125.4,11.4,0:41:0:-125.4:125.4\n4\t146006589\t259347:2\tC\t]4:145998429]C\t99\tPASS\tEVDNC=ASSMB;HOMSEQ=CTT;MAPQ=60;MATEID=259347:1;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_4_145995501_146020501_17C;SPAN=8160;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:41:17:11.4:125.4,11.4,0:41:0:-125.4:125.4\n4\t146286440\t259415:1\tC\t]4:146287045]C\t20\tPASS\tDISC_MAPQ=39;EVDNC=DSCRD;IMPRECISE;MAPQ=39;MATEID=259415:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=4:146286440(-)-4:146287045(+)__4_146265001_146290001D;SPAN=605;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:67:20.9:20.9,0,146.3:0:12:-20.78:26.34\n4\t146287045\t259415:2\tT\tT[4:146286440[\t20\tPASS\tDISC_MAPQ=42;EVDNC=DSCRD;IMPRECISE;MAPQ=42;MATEID=259415:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=4:146286440(-)-4:146287045(+)__4_146265001_146290001D;SPAN=605;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:67:20.9:20.9,0,146.3:0:12:-20.78:26.34\n4\t147282100\t259711:2\tG\t[4:134969975[G\t46\tPASS\tDISC_MAPQ=55;EVDNC=ASDIS;INSERTION=AATGAG;MAPQ=60;MATEID=259711:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_147269501_147294501_1C;SPAN=12312125;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:16:24:13.1:46.1,0,13.1:9:12:-46.99:46.99\n4\t148637296\t717675:1\tC\tC[14:106249864[\t18\tPASS\tEVDNC=ASSMB;HOMSEQ=C;MAPQ=60;MATEID=717675:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_106232001_106257001_8C;SPAN=-1;SUBN=1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:39:18.8:18.8,0,78.2:9:0:-18.75:20.87\n4\t149239904\t260547:1\tA\tA[4:149240230[\t58\tPASS\tEVDNC=ASSMB;HOMSEQ=AAAACTGGGCTGCTCTA;MAPQ=60;MATEID=260547:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_149229501_149254501_71C;SPAN=326;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:20:26:5.9:58.7,0,5.9:20:0:-61.11:61.11\n4\t149240230\t260547:2\tA\t]4:149239904]A\t58\tPASS\tEVDNC=ASSMB;HOMSEQ=AAAACTGGGCTGCTCTA;MAPQ=60;MATEID=260547:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_149229501_149254501_71C;SPAN=326;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:20:26:5.9:58.7,0,5.9:20:0:-61.11:61.11\n4\t149264903\t260549:2\tT\t[4:116655850[T\t32\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=260549:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=4:116655850(-)-4:149264903(-)__4_149254001_149279001D;SPAN=32609053;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:25:29.3:32.6,0,29.3:0:12:-32.59:32.59\n4\t149321671\t260567:1\tT\tT[4:149322303[\t14\tPASS\tEVDNC=ASSMB;INSERTION=GTA;MAPQ=60;MATEID=260567:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_4_149303001_149328001_34C;SPAN=632;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:7:29:14.9:14.9,0,57.8:7:0:-14.96:16.39\n4\t149322303\t260567:2\tT\t]4:149321671]T\t14\tPASS\tEVDNC=ASSMB;INSERTION=GTA;MAPQ=60;MATEID=260567:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_4_149303001_149328001_34C;SPAN=632;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:7:29:14.9:14.9,0,57.8:7:0:-14.96:16.39\n4\t149687001\t260688:2\tA\t]1:53954236]A\t30\tPASS\tEVDNC=ASSMB;HOMSEQ=ACATAA;MAPQ=60;MATEID=260688:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_149670501_149695501_34C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:22:23.6:30.2,0,23.6:11:0:-30.15:30.15\n4\t149780119\t260717:1\tA\t]4:149807097]A\t23\tPASS\tEVDNC=ASSMB;INSERTION=AT;MAPQ=60;MATEID=260717:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_149793001_149818001_2C;SPAN=26978;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:24:23:23,0,36.2:9:0:-22.96:23.15\n4\t149807097\t260717:2\tA\tA[4:149780119[\t23\tPASS\tEVDNC=ASSMB;INSERTION=AT;MAPQ=60;MATEID=260717:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_149793001_149818001_2C;SPAN=26978;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:24:23:23,0,36.2:9:0:-22.96:23.15\n4\t150090161\t260794:1\tT\t]4:150090494]T\t14\tPASS\tEVDNC=ASSMB;HOMSEQ=TTTGGGA;MAPQ=60;MATEID=260794:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_150087001_150112001_35C;SPAN=333;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:42:14.6:14.6,0,90.5:8:0:-14.6:17.8\n4\t150090494\t260794:2\tA\tA[4:150090161[\t14\tPASS\tEVDNC=ASSMB;HOMSEQ=TTTGGGA;MAPQ=60;MATEID=260794:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_150087001_150112001_35C;SPAN=333;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:42:14.6:14.6,0,90.5:8:0:-14.6:17.8\n4\t150697691\t261070:1\tA\t]4:150891227]A\t19\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=ATA;MAPQ=60;MATEID=261070:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_4_150871001_150896001_14C;SPAN=193536;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:7:14:15.8:19.1,0,15.8:7:3:-19.19:19.19\n4\t150824964\t261103:1\tC\tC[4:151005890[\t29\tPASS\tEVDNC=ASSMB;HOMSEQ=CACC;MAPQ=60;MATEID=261103:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_150993501_151018501_23C;SPAN=180926;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:10:10:2.7:29.7,2.7,0:10:0:-29.71:29.71\n4\t150889529\t261357:1\tT\tT[4:151614011[\t23\tPASS\tDISC_MAPQ=59;EVDNC=ASDIS;INSERTION=AC;MAPQ=60;MATEID=261357:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_151606001_151631001_71C;SPAN=724482;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:22:23.6:23.6,0,30.2:6:8:-23.53:23.59\n4\t150891227\t261070:2\tA\tA[4:150697691[\t19\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=ATA;MAPQ=60;MATEID=261070:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_4_150871001_150896001_14C;SPAN=193536;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:7:14:15.8:19.1,0,15.8:7:3:-19.19:19.19\n4\t151005890\t261103:2\tC\t]4:150824964]C\t29\tPASS\tEVDNC=ASSMB;HOMSEQ=CACC;MAPQ=60;MATEID=261103:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_150993501_151018501_23C;SPAN=180926;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:10:10:2.7:29.7,2.7,0:10:0:-29.71:29.71\n4\t151419570\t261276:1\tT\tT[4:151420401[\t20\tPASS\tEVDNC=ASSMB;HOMSEQ=GTCTGTTCCTCATTCTT;MAPQ=60;MATEID=261276:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_151410001_151435001_2C;SPAN=831;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:44:20.6:20.6,0,89.9:10:0:-20.64:23.11\n4\t151420401\t261276:2\tG\t]4:151419570]G\t20\tPASS\tEVDNC=ASSMB;HOMSEQ=GTCTGTTCCTCATTCTT;MAPQ=60;MATEID=261276:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_151410001_151435001_2C;SPAN=831;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:44:20.6:20.6,0,89.9:10:0:-20.64:23.11\n4\t151528024\t261359:1\tC\t]4:151617065]C\t47\tPASS\tEVDNC=ASSMB;INSERTION=A;MAPQ=60;MATEID=261359:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_151606001_151631001_58C;SPAN=89041;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:16:21:4.1:47,0,4.1:16:0:-48.75:48.75\n4\t151538082\t261326:2\tT\t[4:132747922[T\t67\tPASS\tDISC_MAPQ=60;EVDNC=TSI_G;HOMSEQ=AG;INSERTION=TGGGAAGCAGGGAATTGCTGCTGGAAAGACAACCAGATCATGTCTGCCATAGTGCTCAAAGAAAAATAATTTTAAAGTTACAGAAA;MAPQ=60;MATEID=261326:1;MATENM=0;NM=0;NUMPARTS=3;SCTG=c_4_151532501_151557501_28C;SPAN=18790160;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:23:30:8:67.4,0,8:16:10:-70.2:70.2\n4\t151614011\t261357:2\tA\t]4:150889529]A\t23\tPASS\tDISC_MAPQ=55;EVDNC=ASDIS;INSERTION=AC;MAPQ=60;MATEID=261357:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_151606001_151631001_71C;SPAN=724482;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:22:23.6:23.6,0,30.2:6:8:-23.53:23.59\n4\t151617065\t261359:2\tG\tG[4:151528024[\t47\tPASS\tEVDNC=ASSMB;INSERTION=A;MAPQ=60;MATEID=261359:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_151606001_151631001_58C;SPAN=89041;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:16:21:4.1:47,0,4.1:16:0:-48.75:48.75\n4\t151810203\t261406:2\tG\t]4:113846014]G\t39\tPASS\tDISC_MAPQ=25;EVDNC=TSI_G;HOMSEQ=GG;INSERTION=GGTTTTCTAGATATACAATCATGTCATCTGCAAACAGGGACAATTTGACTCTTCTTTTCCTAATTGAATACCCTTTATTTCCTTCTCCTGCGTAATTGCCCTGGCCAGAACTTC;MAPQ=60;MATEID=261406:1;MATENM=0;NM=0;NUMPARTS=3;SCTG=c_4_151802001_151827001_73C;SPAN=37964189;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:24:19.7:39.5,0,19.7:11:3:-39.77:39.77\n4\t152998534\t261761:2\tT\t[4:127800198[T\t62\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;INSERTION=TTAATTAA;MAPQ=60;MATEID=261761:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_4_152978001_153003001_10C;SPAN=25198336;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:19:21:5.7:62.7,5.7,0:13:11:-61.54:61.54\n4\t153093581\t262620:1\tG\t[4:155297937[G\t14\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=C;MAPQ=60;MATEID=262620:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_4_155281001_155306001_94C;SPAN=2204356;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:7:33:14:14,0,66.8:3:4:-13.83:15.94\n4\t153172444\t699197:1\tC\t]14:55912669]C\t36\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;MAPQ=60;MATEID=699197:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_55909001_55934001_46C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:23:20:36.5,0,20:11:9:-36.66:36.66\n4\t153212136\t257457:2\tT\t]4:139735224]T\t23\tPASS\tEVDNC=ASSMB;HOMSEQ=T;MAPQ=60;MATEID=257457:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_139723501_139748501_83C;SPAN=13476912;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:7:8:2.1:23.1,2.1,0:7:0:-22.34:22.34\n4\t153256883\t698839:1\tG\tG[14:54749560[\t22\tPASS\tEVDNC=ASSMB;INSERTION=CAAAACGCTAACAAAATAAATAG;MAPQ=60;MATEID=698839:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_54733001_54758001_25C;SPAN=-1;SUBN=4;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:25:22.7:22.7,0,39.2:9:0:-22.68:22.95\n4\t153664092\t262006:2\tG\t]4:141316353]G\t23\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=262006:1;MATENM=2;NM=1;NUMPARTS=2;SCTG=c_4_153664001_153689001_70C;SPAN=12347739;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:34:23.6:23.6,0,59.9:10:0:-23.45:24.42\n4\t154157039\t262258:1\tC\tC[4:154212720[\t62\tPASS\tDISC_MAPQ=23;EVDNC=DSCRD;IMPRECISE;MAPQ=23;MATEID=262258:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=4:154157039(+)-4:154212720(-)__4_154203001_154228001D;SPAN=55681;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:22:37:29.3:62.3,0,29.3:0:22:-62.79:62.79\n4\t154157044\t988278:1\tA\t[Un_KN707710v1_decoy:1[A\t99\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=988278:2;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_561_1_5701_3C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:34:11:9.3:102.3,9.3,0:34:0:-102.3:102.3\n4\t154212720\t262258:2\tA\t]4:154157039]A\t62\tPASS\tDISC_MAPQ=32;EVDNC=DSCRD;IMPRECISE;MAPQ=32;MATEID=262258:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=4:154157039(+)-4:154212720(-)__4_154203001_154228001D;SPAN=55681;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:22:37:29.3:62.3,0,29.3:0:22:-62.79:62.79\n4\t155292496\t262618:2\tA\t]4:122721082]A\t34\tPASS\tEVDNC=ASSMB;HOMSEQ=A;MAPQ=60;MATEID=262618:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_155281001_155306001_83C;SPAN=32571414;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:29:34.7:34.7,0,38:13:0:-34.76:34.77\n4\t155293071\t462485:1\tG\tG[8:91551154[\t24\tPASS\tEVDNC=ASSMB;HOMSEQ=G;MAPQ=60;MATEID=462485:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_91532001_91557001_5C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:20:24.2:24.2,0,24.2:9:0:-24.09:24.09\n4\t155297937\t262620:2\tC\t[4:153093581[C\t14\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=C;MAPQ=60;MATEID=262620:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_4_155281001_155306001_94C;SPAN=2204356;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:7:33:14:14,0,66.8:3:4:-13.83:15.94\n4\t155418929\t262665:2\tC\t[4:137443236[C\t17\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;MAPQ=60;MATEID=262665:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_155403501_155428501_47C;SPAN=17975693;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:7:19:17.9:17.9,0,27.8:6:2:-17.77:17.94\n4\t155419067\t485690:1\tC\tC[9:10841158[\t20\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=485690:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_10829001_10854001_13C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:23:20:20,0,36.5:8:0:-19.94:20.25\n4\t155578868\t262731:1\tG\tG]4:155582329]\t43\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=262731:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=4:155578868(+)-4:155582329(+)__4_155575001_155600001D;SPAN=3461;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:15:22:10.4:43.4,0,10.4:0:15:-44.31:44.31\n4\t155582329\t262731:2\tC\tC]4:155578868]\t43\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=262731:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=4:155578868(+)-4:155582329(+)__4_155575001_155600001D;SPAN=3461;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:15:22:10.4:43.4,0,10.4:0:15:-44.31:44.31\n4\t159532150\t263732:1\tT\tT[4:159613476[\t36\tPASS\tDISC_MAPQ=34;EVDNC=DSCRD;IMPRECISE;MAPQ=34;MATEID=263732:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=4:159532150(+)-4:159613476(-)__4_159593001_159618001D;SPAN=81326;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:12:3:3.3:36.3,3.3,0:0:12:-36.31:36.31\n4\t159613476\t263732:2\tT\t]4:159532150]T\t36\tPASS\tDISC_MAPQ=44;EVDNC=DSCRD;IMPRECISE;MAPQ=44;MATEID=263732:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=4:159532150(+)-4:159613476(-)__4_159593001_159618001D;SPAN=81326;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:12:3:3.3:36.3,3.3,0:0:12:-36.31:36.31\n4\t160672642\t263986:1\tG\t]4:160672823]G\t26\tPASS\tEVDNC=ASSMB;HOMSEQ=G;MAPQ=60;MATEID=263986:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_160671001_160696001_4C;SPAN=181;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:37:26:26,0,65.6:11:0:-25.91:26.93\n4\t160672823\t263986:2\tG\tG[4:160672642[\t26\tPASS\tEVDNC=ASSMB;HOMSEQ=G;MAPQ=60;MATEID=263986:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_160671001_160696001_4C;SPAN=181;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:37:26:26,0,65.6:11:0:-25.91:26.93\n4\t162472965\t264455:1\tG\tG[4:162475268[\t52\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=264455:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=4:162472965(+)-4:162475268(-)__4_162459501_162484501D;SPAN=2303;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:18:5:4.8:52.8,4.8,0:0:18:-52.81:52.81\n4\t162475268\t264455:2\tT\t]4:162472965]T\t52\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=264455:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=4:162472965(+)-4:162475268(-)__4_162459501_162484501D;SPAN=2303;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:18:5:4.8:52.8,4.8,0:0:18:-52.81:52.81\n4\t162657493\t264507:1\tT\t[4:162657724[T\t29\tPASS\tDISC_MAPQ=59;EVDNC=ASDIS;INSERTION=TA;MAPQ=60;MATEID=264507:2;MATENM=0;NM=3;NUMPARTS=2;SCTG=c_4_162655501_162680501_9C;SPAN=231;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:10:10:2.7:29.7,2.7,0:7:8:-29.71:29.71\n4\t162657724\t264507:2\tT\t[4:162657493[T\t29\tPASS\tDISC_MAPQ=57;EVDNC=ASDIS;INSERTION=TA;MAPQ=60;MATEID=264507:1;MATENM=3;NM=0;NUMPARTS=2;SCTG=c_4_162655501_162680501_9C;SPAN=231;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:10:10:2.7:29.7,2.7,0:7:8:-29.71:29.71\n4\t164281891\t264869:1\tT\tT[4:164285064[\t42\tPASS\tEVDNC=ASSMB;HOMSEQ=AAAT;MAPQ=60;MATEID=264869:2;MATENM=1;NM=4;NUMPARTS=2;SCTG=c_4_164272501_164297501_12C;SPAN=3173;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:14:8:3.9:42.9,3.9,0:14:0:-42.91:42.91\n4\t164285064\t264869:2\tA\t]4:164281891]A\t42\tPASS\tEVDNC=ASSMB;HOMSEQ=AAAT;MAPQ=60;MATEID=264869:1;MATENM=4;NM=1;NUMPARTS=2;SCTG=c_4_164272501_164297501_12C;SPAN=3173;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:14:8:3.9:42.9,3.9,0:14:0:-42.91:42.91\n4\t165081466\t265105:1\tC\tC[4:165083879[\t36\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=265105:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=4:165081466(+)-4:165083879(-)__4_165081001_165106001D;SPAN=2413;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:12:5:3.3:36.3,3.3,0:0:12:-36.31:36.31\n4\t165083879\t265105:2\tT\t]4:165081466]T\t36\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=265105:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=4:1650814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:62.47\n4\t178333677\t268281:2\tG\tG[4:178332605[\t85\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;INSERTION=CAG;MAPQ=60;MATEID=268281:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_178311001_178336001_12C;SPAN=1072;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:28:27:7.8:85.8,7.8,0:23:17:-85.82:85.82\n4\t178333677\t268282:2\tG\t]4:178332737]G\t60\tPASS\tEVDNC=ASSMB;INSERTION=AAT;MAPQ=60;MATEID=268282:1;MATENM=0;NM=5;NUMPARTS=2;SCTG=c_4_178311001_178336001_13C;SPAN=940;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:21:30:14.6:60.8,0,14.6:21:0:-62.47:62.47\n4\t179498878\t268551:1\tC\t]4:179517058]C\t15\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;INSERTION=TCCTTTACTACTAACTTTAGGACAATAAGTCCTTTA;MAPQ=60;MATEID=268551:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_4_179511501_179536501_17C;SPAN=18180;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:6:15:15.5:15.5,0,22.1:4:4:-15.59:15.65\n4\t179517058\t268551:2\tG\tG[4:179498878[\t15\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;INSERTION=TCCTTTACTACTAACTTTAGGACAATAAGTCCTTTA;MAPQ=60;MATEID=268551:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_4_179511501_179536501_17C;SPAN=18180;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:6:15:15.5:15.5,0,22.1:4:4:-15.59:15.65\n4\t179791878\t268623:1\tA\tA[4:179792358[\t39\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=GTA;MAPQ=60;MATEID=268623:2;MATENM=2;NM=1;NUMPARTS=2;SCTG=c_4_179781001_179806001_1C;SPAN=480;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:13:15:0.9:39.6,0.9,0:8:7:-41.34:41.34\n4\t179792358\t268623:2\tG\t]4:179791878]G\t39\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=GTA;MAPQ=60;MATEID=268623:1;MATENM=1;NM=2;NUMPARTS=2;SCTG=c_4_179781001_179806001_1C;SPAN=480;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:13:15:0.9:39.6,0.9,0:8:7:-41.34:41.34\n4\t179989520\t268718:1\tA\tA[4:180052226[\t26\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=268718:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=4:179989520(+)-4:180052226(-)__4_180050501_180075501D;SPAN=62706;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:9:9:2.4:26.4,2.4,0:0:9:-26.41:26.41\n4\t180052226\t268718:2\tC\t]4:179989520]C\t26\tPASS\tDISC_MAPQ=53;EVDNC=DSCRD;IMPRECISE;MAPQ=53;MATEID=268718:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=4:179989520(+)-4:180052226(-)__4_180050501_180075501D;SPAN=62706;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:9:9:2.4:26.4,2.4,0:0:9:-26.41:26.41\n4\t180759783\t268996:1\tG\tG[4:180863357[\t26\tPASS\tEVDNC=ASSMB;INSERTION=AG;MAPQ=60;MATEID=268996:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_180859001_180884001_26C;SPAN=103574;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:9:2:2.4:26.4,2.4,0:9:0:-26.41:26.41\n4\t180855405\t269019:1\tA\tA[4:181404211[\t36\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=CTGGTAA;MAPQ=60;MATEID=269019:2;MATENM=0;NM=4;NUMPARTS=2;SCTG=c_4_181398001_181423001_0C;SPAN=548806;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:12:2:3.3:36.3,3.3,0:10:6:-36.31:36.31\n4\t180863357\t268996:2\tA\t]4:180759783]A\t26\tPASS\tEVDNC=ASSMB;INSERTION=AG;MAPQ=60;MATEID=268996:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_180859001_180884001_26C;SPAN=103574;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:9:2:2.4:26.4,2.4,0:9:0:-26.41:26.41\n4\t180878348\t269006:1\tT\tT[4:180927019[\t56\tPASS\tEVDNC=ASSMB;HOMSEQ=T;MAPQ=60;MATEID=269006:2;MATENM=1;NM=2;NUMPARTS=2;SCTG=c_4_180908001_180933001_1C;SPAN=48671;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:19:4:5.1:56.1,5.1,0:19:0:-56.11:56.11\n4\t180927019\t269006:2\tT\t]4:180878348]T\t56\tPASS\tEVDNC=ASSMB;HOMSEQ=T;MAPQ=60;MATEID=269006:1;MATENM=2;NM=1;NUMPARTS=2;SCTG=c_4_180908001_180933001_1C;SPAN=48671;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:19:4:5.1:56.1,5.1,0:19:0:-56.11:56.11\n4\t180955649\t269010:1\tT\tT[4:180957136[\t19\tPASS\tEVDNC=ASSMB;HOMSEQ=CTCTACAGCACTTTCT;MAPQ=60;MATEID=269010:2;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_4_180957001_180982001_9C;SPAN=1487;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:7:2:1.8:19.8,1.8,0:7:0:-19.8:19.8\n4\t180957136\t269010:2\tC\t]4:180955649]C\t19\tPASS\tEVDNC=ASSMB;HOMSEQ=CTCTACAGCACTTTCT;MAPQ=60;MATEID=269010:1;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_4_180957001_180982001_9C;SPAN=1487;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:7:2:1.8:19.8,1.8,0:7:0:-19.8:19.8\n4\t180961713\t269081:1\tG\tG[4:181779193[\t33\tPASS\tEVDNC=ASSMB;HOMSEQ=TAG;MAPQ=60;MATEID=269081:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_181765501_181790501_21C;SPAN=817480;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:11:9:3:33,3,0:11:0:-33.01:33.01\n4\t181404211\t269019:2\tC\t]4:180855405]C\t36\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=CTGGTAA;MAPQ=60;MATEID=269019:1;MATENM=4;NM=0;NUMPARTS=2;SCTG=c_4_181398001_181423001_0C;SPAN=548806;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:12:2:3.3:36.3,3.3,0:10:6:-36.31:36.31\n4\t181779193\t269081:2\tT\t]4:180961713]T\t33\tPASS\tEVDNC=ASSMB;HOMSEQ=TAG;MAPQ=60;MATEID=269081:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_181765501_181790501_21C;SPAN=817480;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:11:9:3:33,3,0:11:0:-33.01:33.01\n4\t181891336\t269122:1\tT\tT[4:181952530[\t19\tPASS\tEVDNC=ASSMB;HOMSEQ=T;MAPQ=60;MATEID=269122:2;MATENM=9;NM=0;NUMPARTS=2;SCTG=c_4_181937001_181962001_3C;SPAN=61194;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:7:1:1.8:19.8,1.8,0:7:0:-19.8:19.8\n4\t181952530\t269122:2\tT\t]4:181891336]T\t19\tPASS\tEVDNC=ASSMB;HOMSEQ=T;MAPQ=60;MATEID=269122:1;MATENM=0;NM=9;NUMPARTS=2;SCTG=c_4_181937001_181962001_3C;SPAN=61194;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:7:1:1.8:19.8,1.8,0:7:0:-19.8:19.8\n4\t182335217\t477262:1\tG\t[8:130535526[G\t99\tPASS\tDISC_MAPQ=42;EVDNC=ASDIS;MAPQ=60;MATEID=477262:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_130511501_130536501_1C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:38:25:10.5:115.5,10.5,0:27:19:-115.5:115.5\n4\t183247605\t330678:1\tC\t]6:21456465]C\t23\tPASS\tDISC_MAPQ=255;EVDNC=ASDIS;HOMSEQ=CTATATATACTATATATA;MAPQ=60;MATEID=330678:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_21437501_21462501_22C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:11:3.5:23.3,0,3.5:7:3:-24.05:24.05\n4\t183382550\t269465:1\tT\tT[4:183382860[\t46\tPASS\tEVDNC=ASSMB;HOMSEQ=ATAGCACTTTCTTT;MAPQ=60;MATEID=269465:2;MATENM=1;NM=2;NUMPARTS=2;SCTG=c_4_183382501_183407501_9C;SPAN=310;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:16:7:4.2:46.2,4.2,0:16:0:-46.21:46.21\n4\t183382860\t269465:2\tA\t]4:183382550]A\t46\tPASS\tEVDNC=ASSMB;HOMSEQ=ATAGCACTTTCTTT;MAPQ=60;MATEID=269465:1;MATENM=2;NM=1;NUMPARTS=2;SCTG=c_4_183382501_183407501_9C;SPAN=310;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:16:7:4.2:46.2,4.2,0:16:0:-46.21:46.21\n4\t184579575\t269806:1\tC\t]4:184601585]C\t23\tPASS\tEVDNC=ASSMB;INSERTION=T;MAPQ=60;MATEID=269806:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_4_184583001_184608001_4C;SPAN=22010;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:10:0.5:23.6,0,0.5:8:0:-24.74:24.74\n4\t184601585\t269806:2\tG\tG[4:184579575[\t23\tPASS\tEVDNC=ASSMB;INSERTION=T;MAPQ=60;MATEID=269806:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_4_184583001_184608001_4C;SPAN=22010;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:10:0.5:23.6,0,0.5:8:0:-24.74:24.74\n4\t185129516\t269933:1\tA\tA[4:185129779[\t8\tPASS\tEVDNC=ASSMB;HOMSEQ=TGGAGTGCAGTGGCGCGATCTCGGCTCACTGCAA;MAPQ=60;MATEID=269933:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_185122001_185147001_10C;SPAN=263;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:4:18:8.3:8.3,0,34.7:4:0:-8.144:9.2\n4\t185129779\t269933:2\tT\t]4:185129516]T\t8\tPASS\tEVDNC=ASSMB;HOMSEQ=TGGAGTGCAGTGGCGCGATCTCGGCTCACTGCAA;MAPQ=60;MATEID=269933:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_185122001_185147001_10C;SPAN=263;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:4:18:8.3:8.3,0,34.7:4:0:-8.144:9.2\n4\t185520603\t270120:1\tT\tT[4:185522919[\t69\tPASS\tDISC_MAPQ=59;EVDNC=DSCRD;IMPRECISE;MAPQ=59;MATEID=270120:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=4:185520603(+)-4:185522919(-)__4_185514001_185539001D;SPAN=2316;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:23:5:6.3:69.3,6.3,0:0:23:-69.32:69.32\n4\t185522919\t270120:2\tG\t]4:185520603]G\t69\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=270120:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=4:185520603(+)-4:185522919(-)__4_185514001_185539001D;SPAN=2316;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:23:5:6.3:69.3,6.3,0:0:23:-69.32:69.32\n4\t188222216\t270910:1\tG\t]4:188276133]G\t36\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=G;MAPQ=60;MATEID=270910:2;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_4_188258001_188283001_23C;SPAN=53917;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:12:11:3.3:36.3,3.3,0:7:8:-36.31:36.31\n4\t188276133\t270910:2\tG\tG[4:188222216[\t36\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=G;MAPQ=60;MATEID=270910:1;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_4_188258001_188283001_23C;SPAN=53917;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:12:11:3.3:36.3,3.3,0:7:8:-36.31:36.31\n4\t188373022\t270971:1\tG\t]4:188373147]G\t64\tPASS\tEVDNC=ASSMB;HOMSEQ=GA;MAPQ=60;MATEID=270971:2;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_4_188356001_188381001_5C;SPAN=125;SUBN=4;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:22:28:5.3:64.7,0,5.3:22:0:-67.65:67.65\n4\t188373147\t270971:2\tA\tA[4:188373022[\t64\tPASS\tEVDNC=ASSMB;HOMSEQ=GA;MAPQ=60;MATEID=270971:1;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_4_188356001_188381001_5C;SPAN=125;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:22:28:5.3:64.7,0,5.3:22:0:-67.65:67.65\n4\t188802177\t271163:2\tG\t]4:116186292]G\t19\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=271163:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_4_188797001_188822001_5C;SPAN=72615885;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:7:3:1.8:19.8,1.8,0:7:0:-19.8:19.8\n4\t189136860\t271284:1\tT\tT[4:189143119[\t46\tPASS\tEVDNC=ASSMB;HOMSEQ=ATAAATTACCCAGTCT;MAPQ=60;MATEID=271284:2;MATENM=5;NM=3;NUMPARTS=2;SCTG=c_4_189140001_189165001_16C;SPAN=6259;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:15:5:4.2:46.2,4.2,0:15:0:-46.21:46.21\n4\t189143119\t271284:2\tA\t]4:189136860]A\t46\tPASS\tEVDNC=ASSMB;HOMSEQ=ATAAATTACCCAGTCT;MAPQ=60;MATEID=271284:1;MATENM=3;NM=5;NUMPARTS=2;SCTG=c_4_189140001_189165001_16C;SPAN=6259;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:15:5:4.2:46.2,4.2,0:15:0:-46.21:46.21\n4\t189449410\t271447:1\tG\tG[4:189450079[\t36\tPASS\tEVDNC=ASSMB;HOMSEQ=G;MAPQ=60;MATEID=271447:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_4_189434001_189459001_5C;SPAN=669;SUBN=2;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:12:14:0.6:36.3,0.6,0:12:0:-38:38\n4\t189450079\t271447:2\tG\t]4:189449410]G\t36\tPASS\tEVDNC=ASSMB;HOMSEQ=G;MAPQ=60;MATEID=271447:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_4_189434001_189459001_5C;SPAN=669;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:12:14:0.6:36.3,0.6,0:12:0:-38:38\n4\t189508176\t271479:1\tT\t]4:189508329]T\t61\tPASS\tEVDNC=ASSMB;HOMSEQ=T;MAPQ=60;MATEID=271479:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_189507501_189532501_6C;SPAN=153;SUBN=2;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:21:27:5.6:61.7,0,5.6:21:0:-64.38:64.38\n4\t189508329\t271479:2\tT\tT[4:189508176[\t61\tPASS\tEVDNC=ASSMB;HOMSEQ=T;MAPQ=60;MATEID=271479:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_189507501_189532501_6C;SPAN=153;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:21:27:5.6:61.7,0,5.6:21:0:-64.38:64.38\n4\t189948866\t870919:1\tT\tT[20:29088471[\t3\tPASS\tDISC_MAPQ=19;EVDNC=DSCRD;IMPRECISE;MAPQ=19;MATEID=870919:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=4:189948866(+)-20:29088471(-)__20_29081501_29106501D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:81:3.8:3.8,0,198.5:0:8:-3.64:15.33\n5\t15864\t322397:1\tC\t]6:150718]C\t99\tPASS\tDISC_MAPQ=17;EVDNC=TSI_L;HOMSEQ=CTT;MAPQ=52;MATEID=322397:2;MATENM=6;NM=5;NUMPARTS=3;REPSEQ=TTT;SCTG=c_6_147001_172001_17C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:39:30:10.8:118.8,10.8,0:32:13:-118.8:118.8\n5\t231835\t272233:1\tC\tC[5:232743[\t72\tPASS\tDISC_MAPQ=35;EVDNC=DSCRD;IMPRECISE;MAPQ=35;MATEID=272233:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:231835(+)-5:232743(-)__5_220501_245501D;SPAN=908;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:24:18:6.6:72.6,6.6,0:0:24:-72.62:72.62\n5\t232743\t272233:2\tA\t]5:231835]A\t72\tPASS\tDISC_MAPQ=37;EVDNC=DSCRD;IMPRECISE;MAPQ=37;MATEID=272233:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:231835(+)-5:232743(-)__5_220501_245501D;SPAN=908;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:24:18:6.6:72.6,6.6,0:0:24:-72.62:72.62\n5\t281934\t272313:1\tC\tC]Un_KN707921v1_decoy:2561]\t25\tPASS\tDISC_MAPQ=255;EVDNC=TSI_L;INSERTION=C;MAPQ=60;MATEID=272313:2;MATENM=0;NM=0;NUMPARTS=5;SCTG=c_5_269501_294501_90C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:28:25.1:25.1,0,44.9:10:0:-25.14:25.46\n5\t693023\t272546:1\tC\tC[5:784461[\t40\tPASS\tDISC_MAPQ=48;EVDNC=DSCRD;IMPRECISE;MAPQ=48;MATEID=272546:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:693023(+)-5:784461(-)__5_759501_784501D;SPAN=91438;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:21:10.7:40.4,0,10.7:0:14:-41.11:41.11\n5\t697422\t272493:1\tG\t]5:788754]G\t18\tPASS\tDISC_MAPQ=55;EVDNC=DSCRD;IMPRECISE;MAPQ=55;MATEID=272493:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:697422(-)-5:788754(+)__5_686001_711001D;SPAN=91332;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:28:18.5:18.5,0,51.5:0:8:-18.54:19.42\n5\t710054\t272506:1\tT\t]5:795262]T\t18\tPASS\tDISC_MAPQ=55;EVDNC=DSCRD;IMPRECISE;MAPQ=55;MATEID=272506:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:710054(-)-5:795262(+)__5_686001_711001D;SPAN=85208;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:29:18.2:18.2,0,54.5:0:8:-18.26:19.27\n5\t711897\t272511:1\tC\tC[5:796051[\t59\tPASS\tDISC_MAPQ=59;EVDNC=ASDIS;HOMSEQ=TTCCCAGTACTGTGCTC;MAPQ=60;MATEID=272511:2;MATENM=0;NM=3;NUMPARTS=2;SCTG=c_5_710501_735501_41C;SPAN=84154;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:20:20:5.4:59.4,5.4,0:13:8:-59.41:59.41\n5\t754009\t272532:1\tT\t]5:754663]T\t37\tPASS\tDISC_MAPQ=38;EVDNC=DSCRD;IMPRECISE;MAPQ=38;MATEID=272532:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:754009(-)-5:754663(+)__5_735001_760001D;SPAN=654;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:17:68:37.1:37.1,0,132.8:0:17:-37:40.1\n5\t754663\t272532:2\tG\tG[5:754009[\t37\tPASS\tDISC_MAPQ=40;EVDNC=DSCRD;IMPRECISE;MAPQ=40;MATEID=272532:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:754009(-)-5:754663(+)__5_735001_760001D;SPAN=654;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:17:68:37.1:37.1,0,132.8:0:17:-37:40.1\n5\t784461\t272546:2\tC\t]5:693023]C\t40\tPASS\tDISC_MAPQ=41;EVDNC=DSCRD;IMPRECISE;MAPQ=41;MATEID=272546:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:693023(+)-5:784461(-)__5_759501_784501D;SPAN=91438;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:21:10.7:40.4,0,10.7:0:14:-41.11:41.11\n5\t788754\t272493:2\tG\tG[5:697422[\t18\tPASS\tDISC_MAPQ=37;EVDNC=DSCRD;IMPRECISE;MAPQ=37;MATEID=272493:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:697422(-)-5:788754(+)__5_686001_711001D;SPAN=91332;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:28:18.5:18.5,0,51.5:0:8:-18.54:19.42\n5\t795262\t272506:2\tT\tT[5:710054[\t18\tPASS\tDISC_MAPQ=53;EVDNC=DSCRD;IMPRECISE;MAPQ=53;MATEID=272506:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:710054(-)-5:795262(+)__5_686001_711001D;SPAN=85208;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:29:18.2:18.2,0,54.5:0:8:-18.26:19.27\n5\t796051\t272511:2\tT\t]5:711897]T\t59\tPASS\tDISC_MAPQ=255;EVDNC=ASDIS;HOMSEQ=TTCCCAGTACTGTGCTC;MAPQ=31;MATEID=272511:1;MATENM=3;NM=0;NUMPARTS=2;SCTG=c_5_710501_735501_41C;SPAN=84154;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:20:20:5.4:59.4,5.4,0:13:8:-59.41:59.41\n5\t1044616\t272655:1\tT\t]5:1045417]T\t94\tPASS\tDISC_MAPQ=42;EVDNC=DSCRD;IMPRECISE;MAPQ=42;MATEID=272655:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:1044616(-)-5:1045417(+)__5_1029001_1054001D;SPAN=801;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:32:39:2.3:94.7,0,2.3:0:32:-99.78:99.78\n5\t1045417\t272655:2\tT\tT[5:1044616[\t94\tPASS\tDISC_MAPQ=53;EVDNC=DSCRD;IMPRECISE;MAPQ=53;MATEID=272655:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:1044616(-)-5:1045417(+)__5_1029001_1054001D;SPAN=801;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:32:39:2.3:94.7,0,2.3:0:32:-99.78:99.78\n5\t1178274\t272733:1\tC\tC[5:1180617[\t99\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=272733:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:1178274(+)-5:1180617(-)__5_1176001_1201001D;SPAN=2343;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:35:7:9.6:105.6,9.6,0:0:35:-105.6:105.6\n5\t1180617\t272733:2\tA\t]5:1178274]A\t99\tPASS\tDISC_MAPQ=47;EVDNC=DSCRD;IMPRECISE;MAPQ=47;MATEID=272733:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:1178274(+)-5:1180617(-)__5_1176001_1201001D;SPAN=2343;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:35:7:9.6:105.6,9.6,0:0:35:-105.6:105.6\n5\t1364018\t694524:1\tC\t[14:42561542[C\t39\tPASS\tDISC_MAPQ=52;EVDNC=ASDIS;HOMSEQ=TTG;MAPQ=60;MATEID=694524:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_42556501_42581501_72C;SPAN=-1;SUBN=1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:25:22.7:39.2,0,22.7:5:11:-39.39:39.39\n5\t1845407\t273027:1\tC\t]5:1846001]C\t99\tPASS\tDISC_MAPQ=43;EVDNC=ASDIS;HOMSEQ=CTCTCTCTATCTCTATATGTGTCTCCATCTCTGTCTCTATCTCTAT;MAPQ=19;MATEID=273027:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_5_1837501_1862501_44C;SPAN=594;SUBN=1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:45:49:13.5:148.5,13.5,0:28:25:-146.9:146.9\n5\t1846001\t273027:2\tT\tT[5:1845407[\t99\tPASS\tDISC_MAPQ=57;EVDNC=ASDIS;HOMSEQ=CTCTCTCTATCTCTATATGTGTCTCCATCTCTGTCTCTATCTCTAT;MAPQ=60;MATEID=273027:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_5_1837501_1862501_44C;SPAN=594;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:45:49:13.5:148.5,13.5,0:28:25:-146.9:146.9\n5\t1941042\t273098:1\tT\tT[5:1941341[\t82\tPASS\tEVDNC=ASSMB;HOMSEQ=GGAAAAATTTCT;MAPQ=60;MATEID=273098:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_5_1935501_1960501_21C;SPAN=299;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:27:22:7.5:82.5,7.5,0:27:0:-82.52:82.52\n5\t1941341\t273098:2\tG\t]5:1941042]G\t82\tPASS\tEVDNC=ASSMB;HOMSEQ=GGAAAAATTTCT;MAPQ=60;MATEID=273098:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_5_1935501_1960501_21C;SPAN=299;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:27:22:7.5:82.5,7.5,0:27:0:-82.52:82.52\n5\t1950911\t273108:1\tG\tG[5:1951342[\t79\tPASS\tEVDNC=ASSMB;HOMSEQ=GTCGTCTGCTGTG;MAPQ=60;MATEID=273108:2;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_5_1935501_1960501_49C;SPAN=431;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:26:30:1.8:79.2,1.8,0:26:0:-82.68:82.68\n5\t1951342\t273108:2\tG\t]5:1950911]G\t79\tPASS\tEVDNC=ASSMB;HOMSEQ=GTCGTCTGCTGTG;MAPQ=60;MATEID=273108:1;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_5_1935501_1960501_49C;SPAN=431;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:26:30:1.8:79.2,1.8,0:26:0:-82.68:82.68\n5\t1968299\t273121:1\tG\tG[5:1971470[\t35\tPASS\tEVDNC=ASSMB;HOMSEQ=AAATAAAGAAAATTGTGG;MAPQ=60;MATEID=273121:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_5_1960001_1985001_15C;SPAN=3171;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:27:190:35.8:35.8,0,441.8:27:0:-35.72:56.29\n5\t1971470\t273121:2\tA\t]5:1968299]A\t35\tPASS\tEVDNC=ASSMB;HOMSEQ=AAATAAAGAAAATTGTGG;MAPQ=60;MATEID=273121:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_5_1960001_1985001_15C;SPAN=3171;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:27:190:35.8:35.8,0,441.8:27:0:-35.72:56.29\n5\t2145979\t273172:1\tA\tA[5:2146365[\t21\tPASS\tDISC_MAPQ=6;EVDNC=ASDIS;INSERTION=AGTCCAGAGCCTCCACCTCCTG;MAPQ=26;MATEID=273172:2;MATENM=6;NM=2;NUMPARTS=2;SCTG=c_5_2131501_2156501_26C;SPAN=386;SUBN=1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:78:21.2:21.2,0,173:8:5:-20.99:28.09\n5\t2146365\t273172:2\tA\t]5:2145979]A\t21\tPASS\tDISC_MAPQ=2;EVDNC=ASDIS;INSERTION=AGTCCAGAGCCTCCACCTCCTG;MAPQ=10;MATEID=273172:1;MATENM=2;NM=6;NUMPARTS=2;SCTG=c_5_2131501_2156501_26C;SPAN=386;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:78:21.2:21.2,0,173:8:5:-20.99:28.09\n5\t3499159\t273747:1\tT\tT[5:3499469[\t18\tPASS\tEVDNC=ASSMB;HOMSEQ=AAAAGCAGACAT;MAPQ=60;MATEID=273747:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_5_3479001_3504001_126C;SPAN=310;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:27:18.8:18.8,0,48.5:8:0:-18.82:19.57\n5\t3499469\t273747:2\tA\t]5:3499159]A\t18\tPASS\tEVDNC=ASSMB;HOMSEQ=AAAAGCAGACAT;MAPQ=60;MATEID=273747:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_5_3479001_3504001_126C;SPAN=310;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:27:18.8:18.8,0,48.5:8:0:-18.82:19.57\n5\t3502213\t273749:1\tT\tT[5:3502528[\t0\tPASS\tEVDNC=ASSMB;HOMSEQ=CAAAATTTATTTTT;MAPQ=60;MATEID=273749:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_5_3479001_3504001_162C;SPAN=315;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/0:6:123:14.4:0,14.4,336.6:6:0:14.77:9.6\n5\t3502528\t273749:2\tC\t]5:3502213]C\t0\tPASS\tEVDNC=ASSMB;HOMSEQ=CAAAATTTATTTTT;MAPQ=60;MATEID=273749:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_5_3479001_3504001_162C;SPAN=315;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/0:6:123:14.4:0,14.4,336.6:6:0:14.77:9.6\n5\t5930999\t274695:1\tA\t]5:5931169]A\t19\tPASS\tEVDNC=ASSMB;HOMSEQ=ATAATGCATGCCTGAATGTGTGCA;MAPQ=60;MATEID=274695:2;MATENM=3;NM=0;NUMPARTS=2;SCTG=c_5_5929001_5954001_66C;SPAN=170;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:48:19.7:19.7,0,98.9:10:0:-19.52:22.68\n5\t5931169\t274695:2\tA\tA[5:5930999[\t19\tPASS\tEVDNC=ASSMB;HOMSEQ=ATAATGCATGCCTGAATGTGTGCA;MAPQ=60;MATEID=274695:1;MATENM=0;NM=3;NUMPARTS=2;SCTG=c_5_5929001_5954001_66C;SPAN=170;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:48:19.7:19.7,0,98.9:10:0:-19.52:22.68\n5\t6481317\t274867:1\tC\t]5:6505336]C\t35\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;INSERTION=AACAGA;MAPQ=60;MATEID=274867:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_5_6492501_6517501_47C;SPAN=24019;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:17:5.3:35,0,5.3:5:11:-35.78:35.78\n5\t6505336\t274867:2\tC\tC[5:6481317[\t35\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;INSERTION=AACAGA;MAPQ=60;MATEID=274867:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_5_6492501_6517501_47C;SPAN=24019;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:17:5.3:35,0,5.3:5:11:-35.78:35.78\n5\t7372255\t275284:1\tC\t]5:7372743]C\t32\tPASS\tDISC_MAPQ=52;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=275284:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_5_7350001_7375001_31C;SPAN=488;SUBN=4;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:25:29.3:32.6,0,29.3:5:9:-32.59:32.59\n5\t7372743\t275284:2\tA\tA[5:7372255[\t32\tPASS\tDISC_MAPQ=48;EVDNC=DSCRD;IMPRECISE;MAPQ=5;MATEID=275284:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_5_7350001_7375001_31C;SPAN=488;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:25:29.3:32.6,0,29.3:5:9:-32.59:32.59\n5\t8557583\t275732:1\tT\t]5:8573594]T\t12\tPASS\tEVDNC=ASSMB;INSERTION=AACTAAGGATAGTCTTTTT;MAPQ=60;MATEID=275732:2;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_5_8550501_8575501_60C;SPAN=16011;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:7:38:12.5:12.5,0,81.8:7:0:-12.43:15.46\n5\t8573594\t275732:2\tG\tG[5:8557583[\t12\tPASS\tEVDNC=ASSMB;INSERTION=AACTAAGGATAGTCTTTTT;MAPQ=60;MATEID=275732:1;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_5_8550501_8575501_60C;SPAN=16011;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:7:38:12.5:12.5,0,81.8:7:0:-12.43:15.46\n5\t8897316\t284229:1\tC\t]5:28844816]C\t50\tPASS\tEVDNC=ASSMB;INSERTION=A;MAPQ=60;MATEID=284229:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_5_28836501_28861501_24C;SPAN=19947500;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:18:30:24.5:50.9,0,24.5:18:0:-51.49:51.49\n5\t9400507\t276045:1\tT\tT[5:9400769[\t29\tPASS\tEVDNC=ASSMB;HOMSEQ=ACATTTTTT;MAPQ=60;MATEID=276045:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_5_9383501_9408501_9C;SPAN=262;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:38:29:29,0,65.3:12:0:-28.93:29.75\n5\t9400769\t276045:2\tA\t]5:9400507]A\t29\tPASS\tEVDNC=ASSMB;HOMSEQ=ACATTTTTT;MAPQ=60;MATEID=276045:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_5_9383501_9408501_9C;SPAN=262;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:38:29:29,0,65.3:12:0:-28.93:29.75\n5\t10005166\t276277:1\tT\tT[5:10005471[\t99\tPASS\tDISC_MAPQ=53;EVDNC=ASDIS;INSERTION=CAC;MAPQ=60;MATEID=276277:2;MATENM=3;NM=1;NUMPARTS=2;SCTG=c_5_9996001_10021001_17C;SPAN=305;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:70:19:19.5:214.5,19.5,0:58:17:-214.6:214.6\n5\t10005471\t276277:2\tA\t]5:10005166]A\t99\tPASS\tDISC_MAPQ=28;EVDNC=ASDIS;INSERTION=CAC;MAPQ=60;MATEID=276277:1;MATENM=1;NM=3;NUMPARTS=2;SCTG=c_5_9996001_10021001_17C;SPAN=305;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:70:19:19.5:214.5,19.5,0:58:17:-214.6:214.6\n5\t10336485\t276443:1\tG\tG[5:10336766[\t2\tPASS\tEVDNC=ASSMB;HOMSEQ=CTGCACTCCAGCCTGGG;MAPQ=60;MATEID=276443:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_5_10314501_10339501_45C;SPAN=281;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:5:50:2.6:2.6,0,121.4:5:0:-2.45:9.611\n5\t10336766\t276443:2\tC\t]5:10336485]C\t2\tPASS\tEVDNC=ASSMB;HOMSEQ=CTGCACTCCAGCCTGGG;MAPQ=60;MATEID=276443:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_5_10314501_10339501_45C;SPAN=281;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:5:50:2.6:2.6,0,121.4:5:0:-2.45:9.611\n5\t10756070\t276612:1\tC\tC[5:10756404[\t23\tPASS\tEVDNC=ASSMB;HOMSEQ=GC;MAPQ=60;MATEID=276612:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_5_10755501_10780501_80C;SPAN=334;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:58:23.3:23.3,0,122.3:12:0:-23.31:27.18\n5\t10756404\t276612:2\tG\t]5:10756070]G\t23\tPASS\tEVDNC=ASSMB;HOMSEQ=GC;MAPQ=60;MATEID=276612:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_5_10755501_10780501_80C;SPAN=334;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:58:23.3:23.3,0,122.3:12:0:-23.31:27.18\n5\t11160451\t276825:1\tA\tA[5:11399503[\t18\tPASS\tEVDNC=ASSMB;INSERTION=TTATCTCATACAAT;MAPQ=60;MATEID=276825:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_5_11392501_11417501_15C;SPAN=239052;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:27:18.8:18.8,0,48.5:8:0:-18.82:19.57\n5\t11399503\t276825:2\tC\t]5:11160451]C\t18\tPASS\tEVDNC=ASSMB;INSERTION=TTATCTCATACAAT;MAPQ=60;MATEID=276825:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_5_11392501_11417501_15C;SPAN=239052;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:27:18.8:18.8,0,48.5:8:0:-18.82:19.57\n5\t11578757\t276958:1\tT\t]5:11859207]T\t20\tPASS\tEVDNC=ASSMB;HOMSEQ=TTAA;MAPQ=60;MATEID=276958:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_5_11858001_11883001_108C;SPAN=280450;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:35:20:20,0,66.2:9:0:-19.87:21.36\n5\t11593958\t276916:1\tA\t]5:11696236]A\t47\tPASS\tEVDNC=ASSMB;HOMSEQ=ATAAAACT;MAPQ=60;MATEID=276916:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_5_11686501_11711501_17C;SPAN=102278;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:19:55:47.3:47.3,0,90.2:19:0:-47.26:48.03\n5\t11655906\t303817:1\tT\t[5:94472477[T\t23\tPASS\tDISC_MAPQ=255;EVDNC=ASDIS;MAPQ=60;MATEID=303817:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_5_94472001_94497001_10C;SPAN=82816571;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:10:0.5:23.6,0,0.5:6:4:-24.74:24.74\n5\t11696236\t276916:2\tT\tT[5:11593958[\t47\tPASS\tEVDNC=ASSMB;HOMSEQ=ATAAAACT;MAPQ=60;MATEID=276916:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_5_11686501_11711501_17C;SPAN=102278;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:19:55:47.3:47.3,0,90.2:19:0:-47.26:48.03\n5\t11859207\t276958:2\tA\tA[5:11578757[\t20\tPASS\tEVDNC=ASSMB;HOMSEQ=TTAA;MAPQ=60;MATEID=276958:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_5_11858001_11883001_108C;SPAN=280450;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:35:20:20,0,66.2:9:0:-19.87:21.36\n5\t12186388\t277088:1\tT\tT[5:12186680[\t10\tPASS\tEVDNC=ASSMB;HOMSEQ=AGTATTTTGTTCT;MAPQ=60;MATEID=277088:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_5_12176501_12201501_61C;SPAN=292;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:6:35:10.1:10.1,0,76.1:6:0:-9.968:13.04\n5\t12186680\t277088:2\tA\t]5:12186388]A\t10\tPASS\tEVDNC=ASSMB;HOMSEQ=AGTATTTTGTTCT;MAPQ=60;MATEID=277088:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_5_12176501_12201501_61C;SPAN=292;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:6:35:10.1:10.1,0,76.1:6:0:-9.968:13.04\n5\t13416495\t277704:1\tC\tC[5:13422742[\t92\tPASS\tEVDNC=ASSMB;HOMSEQ=GAAAATCACGTCAACC;MAPQ=60;MATEID=277704:2;MATENM=6;NM=0;NUMPARTS=2;SCTG=c_5_13401501_13426501_95C;SPAN=6247;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:29:31:8.4:92.4,8.4,0:29:0:-92.42:92.42\n5\t13422742\t277704:2\tG\t]5:13416495]G\t92\tPASS\tEVDNC=ASSMB;HOMSEQ=GAAAATCACGTCAACC;MAPQ=60;MATEID=277704:1;MATENM=0;NM=6;NUMPARTS=2;SCTG=c_5_13401501_13426501_95C;SPAN=6247;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:29:31:8.4:92.4,8.4,0:29:0:-92.42:92.42\n5\t16124701\t278656:1\tA\tA[5:16125383[\t15\tPASS\tEVDNC=ASSMB;INSERTION=TAGAA;MAPQ=60;MATEID=278656:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_5_16121001_16146001_70C;SPAN=682;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:63:15.5:15.5,0,140.9:10:0:-15.3:21.37\n5\t16125383\t278656:2\tC\t]5:16124701]C\t15\tPASS\tEVDNC=ASSMB;INSERTION=TAGAA;MAPQ=60;MATEID=278656:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_5_16121001_16146001_70C;SPAN=682;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:63:15.5:15.5,0,140.9:10:0:-15.3:21.37\n5\t16556459\t278904:1\tT\t]5:16743998]T\t22\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=T;MAPQ=60;MATEID=278904:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_5_16733501_16758501_7C;SPAN=187539;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:39:22.1:22.1,0,74.9:5:6:-22.05:23.72\n5\t16743998\t278904:2\tT\tT[5:16556459[\t22\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=T;MAPQ=60;MATEID=278904:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_5_16733501_16758501_7C;SPAN=187539;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:39:22.1:22.1,0,74.9:5:6:-22.05:23.72\n5\t17508114\t279336:1\tC\t]5:17621777]C\t15\tPASS\tDISC_MAPQ=45;EVDNC=DSCRD;IMPRECISE;MAPQ=45;MATEID=279336:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:17508114(-)-5:17621777(+)__5_17615501_17640501D;SPAN=113663;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:39:15.5:15.5,0,81.5:0:8:-15.45:18.09\n5\t17508349\t279337:1\tG\tG[5:17622087[\t50\tPASS\tDISC_MAPQ=43;EVDNC=DSCRD;IMPRECISE;MAPQ=43;MATEID=279337:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:17508349(+)-5:17622087(-)__5_17615501_17640501D;SPAN=113738;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:18:34:33.5:50,0,33.5:0:18:-49.98:49.98\n5\t17621777\t279336:2\tT\tT[5:17508114[\t15\tPASS\tDISC_MAPQ=54;EVDNC=DSCRD;IMPRECISE;MAPQ=54;MATEID=279336:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:17508114(-)-5:17621777(+)__5_17615501_17640501D;SPAN=113663;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:39:15.5:15.5,0,81.5:0:8:-15.45:18.09\n5\t17622087\t279337:2\tC\t]5:17508349]C\t50\tPASS\tDISC_MAPQ=58;EVDNC=DSCRD;IMPRECISE;MAPQ=58;MATEID=279337:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:17508349(+)-5:17622087(-)__5_17615501_17640501D;SPAN=113738;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:18:34:33.5:50,0,33.5:0:18:-49.98:49.98\n5\t19375266\t280181:1\tA\tA[5:19376287[\t99\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=280181:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:19375266(+)-5:19376287(-)__5_19355001_19380001D;SPAN=1021;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:44:12:12.3:135.3,12.3,0:0:44:-135.3:135.3\n5\t19376287\t280181:2\tC\t]5:19375266]C\t99\tPASS\tDISC_MAPQ=58;EVDNC=DSCRD;IMPRECISE;MAPQ=58;MATEID=280181:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:19375266(+)-5:19376287(-)__5_19355001_19380001D;SPAN=1021;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:44:12:12.3:135.3,12.3,0:0:44:-135.3:135.3\n5\t20832371\t280763:1\tT\t[5:34371648[T\t17\tPASS\tDISC_MAPQ=59;EVDNC=DSCRD;IMPRECISE;MAPQ=59;MATEID=280763:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:20832371(-)-5:34371648(-)__5_20825001_20850001D;SPAN=13539277;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:33:17.3:17.3,0,63.5:0:8:-17.13:18.75\n5\t20834797\t280766:1\tT\tT]5:34371504]\t10\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=280766:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:20834797(+)-5:34371504(+)__5_20825001_20850001D;SPAN=13536707;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:57:10.4:10.4,0,132.5:0:8:-10.39:16.63\n5\t20849244\t280776:1\tT\t]5:20854316]T\t32\tPASS\tDISC_MAPQ=9;EVDNC=ASDIS;HOMSEQ=TG;MAPQ=19;MATEID=280776:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_5_20825001_20850001_93C;SPAN=5072;SUBN=1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:48:32.9:32.9,0,85.7:10:10:-32.72:34.13\n5\t20854316\t280776:2\tG\tG[5:20849244[\t32\tPASS\tDISC_MAPQ=13;EVDNC=ASDIS;HOMSEQ=TG;MAPQ=43;MATEID=280776:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_5_20825001_20850001_93C;SPAN=5072;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:48:32.9:32.9,0,85.7:10:10:-32.72:34.13\n5\t21149159\t280926:1\tC\t]5:21172268]C\t75\tPASS\tEVDNC=ASSMB;HOMSEQ=CA;MAPQ=60;MATEID=280926:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_5_21168001_21193001_24C;SPAN=23109;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:26:38:19.1:75.2,0,19.1:26:0:-76.88:76.88\n5\t21172268\t280926:2\tA\tA[5:21149159[\t75\tPASS\tEVDNC=ASSMB;HOMSEQ=CA;MAPQ=60;MATEID=280926:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_5_21168001_21193001_24C;SPAN=23109;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:26:38:19.1:75.2,0,19.1:26:0:-76.88:76.88\n5\t21207604\t280936:2\tT\t]4:79973439]T\t99\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=280936:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=4:79973439(+)-5:21207604(-)__5_21192501_21217501D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:34:36:9.9:108.9,9.9,0:0:34:-108.9:108.9\n5\t21450121\t281078:1\tT\tT[5:21452317[\t99\tPASS\tDISC_MAPQ=59;EVDNC=DSCRD;IMPRECISE;MAPQ=59;MATEID=281078:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:21450121(+)-5:21452317(-)__5_21437501_21462501D;SPAN=2196;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:42:6:11.7:128.7,11.7,0:0:42:-128.7:128.7\n5\t21452317\t281078:2\tT\t]5:21450121]T\t99\tPASS\tDISC_MAPQ=59;EVDNC=DSCRD;IMPRECISE;MAPQ=59;MATEID=281078:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:21450121(+)-5:21452317(-)__5_21437501_21462501D;SPAN=2196;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:42:6:11.7:128.7,11.7,0:0:42:-128.7:128.7\n5\t22796516\t281614:1\tT\tT[5:22796820[\t17\tPASS\tEVDNC=ASSMB;HOMSEQ=CAGATTTTTTATCTT;MAPQ=60;MATEID=281614:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_5_22785001_22810001_61C;SPAN=304;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:46:17:17,0,96.2:9:0:-16.78:20.14\n5\t22796820\t281614:2\tC\t]5:22796516]C\t17\tPASS\tEVDNC=ASSMB;HOMSEQ=CAGATTTTTTATCTT;MAPQ=60;MATEID=281614:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_5_22785001_22810001_61C;SPAN=304;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:46:17:17,0,96.2:9:0:-16.78:20.14\n5\t23902973\t282017:1\tC\tC[5:23905101[\t99\tPASS\tDISC_MAPQ=58;EVDNC=DSCRD;IMPRECISE;MAPQ=58;MATEID=282017:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:23902973(+)-5:23905101(-)__5_23887501_23912501D;SPAN=2128;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:40:12:11.1:122.1,11.1,0:0:40:-122.1:122.1\n5\t23905101\t282017:2\tA\t]5:23902973]A\t99\tPASS\tDISC_MAPQ=55;EVDNC=DSCRD;IMPRECISE;MAPQ=55;MATEID=282017:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:23902973(+)-5:23905101(-)__5_23887501_23912501D;SPAN=2128;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:40:12:11.1:122.1,11.1,0:0:40:-122.1:122.1\n5\t24370433\t282268:1\tT\tT[5:24373328[\t99\tPASS\tEVDNC=ASSMB;HOMSEQ=TAAAACAAAATTTTT;MAPQ=60;MATEID=282268:2;MATENM=3;NM=5;NUMPARTS=2;SCTG=c_5_24353001_24378001_2C;SPAN=2895;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:60:111:99:167,0,110.9:60:0:-167.4:167.4\n5\t24373328\t282268:2\tT\t]5:24370433]T\t99\tPASS\tEVDNC=ASSMB;HOMSEQ=TAAAACAAAATTTTT;MAPQ=60;MATEID=282268:1;MATENM=5;NM=3;NUMPARTS=2;SCTG=c_5_24353001_24378001_2C;SPAN=2895;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:60:111:99:167,0,110.9:60:0:-167.4:167.4\n5\t24776152\t282465:1\tT\t]5:24783207]T\t0\tPASS\tEVDNC=ASSMB;HOMSEQ=T;MAPQ=60;MATEID=282465:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_5_24769501_24794501_13C;SPAN=7055;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/0:7:85:0.6:0,0.6,214.5:7:0:0.7858:12.84\n5\t24783207\t282465:2\tT\tT[5:24776152[\t0\tPASS\tEVDNC=ASSMB;HOMSEQ=T;MAPQ=60;MATEID=282465:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_5_24769501_24794501_13C;SPAN=7055;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/0:7:85:0.6:0,0.6,214.5:7:0:0.7858:12.84\n5\t25623489\t282763:1\tA\t]5:25625607]A\t48\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;INSERTION=ACAATTAAACGCAATTAACCTCACAATTAA;MAPQ=60;MATEID=282763:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_5_25602501_25627501_20C;SPAN=2118;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:20:64:48.2:48.2,0,110.9:16:10:-48.03:49.48\n5\t25625607\t282763:2\tC\tC[5:25623489[\t48\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;INSERTION=ACAATTAAACGCAATTAACCTCACAATTAA;MAPQ=60;MATEID=282763:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_5_256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1_28935001D;SPAN=2459;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:28:28.4:28.4,0,41.6:0:11:-28.44:28.58\n5\t31190135\t285245:1\tT\t[5:31191075[T\t99\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TT;MAPQ=60;MATEID=285245:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_5_31188501_31213501_4C;SPAN=940;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:47:50:13.8:151.8,13.8,0:33:31:-151.8:151.8\n5\t31191075\t285245:2\tA\t[5:31190135[A\t99\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TT;MAPQ=60;MATEID=285245:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_5_31188501_31213501_4C;SPAN=940;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:47:50:13.8:151.8,13.8,0:33:31:-151.8:151.8\n5\t33830191\t286429:1\tA\t]5:34171242]A\t17\tPASS\tEVDNC=ASSMB;INSERTION=T;MAPQ=60;MATEID=286429:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_5_34153001_34178001_36C;SPAN=341051;SUBN=1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:7:20:17.6:17.6,0,30.8:7:0:-17.49:17.74\n5\t34171242\t286429:2\tA\tA[5:33830191[\t17\tPASS\tEVDNC=ASSMB;INSERTION=T;MAPQ=60;MATEID=286429:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_5_34153001_34178001_36C;SPAN=341051;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:7:20:17.6:17.6,0,30.8:7:0:-17.49:17.74\n5\t34304693\t286531:1\tT\tT[5:34307800[\t12\tPASS\tDISC_MAPQ=22;EVDNC=ASDIS;HOMSEQ=ATTTTTTTT;MAPQ=60;MATEID=286531:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_5_34300001_34325001_48C;SPAN=3107;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:60:12.8:12.8,0,138.2:5:6:-12.84:18.99\n5\t34307800\t286531:2\tA\t]5:34304693]A\t12\tPASS\tDISC_MAPQ=31;EVDNC=ASDIS;HOMSEQ=ATTTTTTTT;MAPQ=60;MATEID=286531:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_5_34300001_34325001_48C;SPAN=3107;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:60:12.8:12.8,0,138.2:5:6:-12.84:18.99\n5\t34371504\t280766:2\tC\tC]5:20834797]\t10\tPASS\tDISC_MAPQ=29;EVDNC=DSCRD;IMPRECISE;MAPQ=29;MATEID=280766:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:20834797(+)-5:34371504(+)__5_20825001_20850001D;SPAN=13536707;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:57:10.4:10.4,0,132.5:0:8:-10.39:16.63\n5\t34371648\t280763:2\tG\t[5:20832371[G\t17\tPASS\tDISC_MAPQ=50;EVDNC=DSCRD;IMPRECISE;MAPQ=50;MATEID=280763:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:20832371(-)-5:34371648(-)__5_20825001_20850001D;SPAN=13539277;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:33:17.3:17.3,0,63.5:0:8:-17.13:18.75\n5\t35191048\t286918:1\tC\tC[5:35191370[\t16\tPASS\tEVDNC=ASSMB;HOMSEQ=CAGATGTGTTATTTTC;MAPQ=60;MATEID=286918:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_5_35182001_35207001_0C;SPAN=322;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:59:16.4:16.4,0,131.9:10:0:-16.43:21.68\n5\t35191370\t286918:2\tC\t]5:35191048]C\t16\tPASS\tEVDNC=ASSMB;HOMSEQ=CAGATGTGTTATTTTC;MAPQ=60;MATEID=286918:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_5_35182001_35207001_0C;SPAN=322;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:59:16.4:16.4,0,131.9:10:0:-16.43:21.68\n5\t35614083\t287048:1\tG\tG[5:35614385[\t30\tPASS\tEVDNC=ASSMB;HOMSEQ=AAAAAATTGAGG;MAPQ=60;MATEID=287048:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_5_35598501_35623501_58C;SPAN=302;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:34:30.2:30.2,0,53.3:12:0:-30.06:30.47\n5\t35614385\t287048:2\tA\t]5:35614083]A\t30\tPASS\tEVDNC=ASSMB;HOMSEQ=AAAAAATTGAGG;MAPQ=60;MATEID=287048:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_5_35598501_35623501_58C;SPAN=302;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:34:30.2:30.2,0,53.3:12:0:-30.06:30.47\n5\t37293717\t287660:1\tT\tT[5:37294029[\t99\tPASS\tEVDNC=ASSMB;HOMSEQ=TAAAGCAAATGATGATTCTT;MAPQ=60;MATEID=287660:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_5_37289001_37314001_85C;SPAN=312;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:41:43:12:132,12,0:41:0:-132:132\n5\t37294029\t287660:2\tT\t]5:37293717]T\t99\tPASS\tEVDNC=ASSMB;HOMSEQ=TAAAGCAAATGATGATTCTT;MAPQ=60;MATEID=287660:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_5_37289001_37314001_85C;SPAN=312;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:41:43:12:132,12,0:41:0:-132:132\n5\t39787650\t288543:1\tA\t]9:7741406]A\t64\tPASS\tDISC_MAPQ=17;EVDNC=ASDIS;INSERTION=GAGTT;MAPQ=26;MATEID=288543:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_5_39763501_39788501_1C;SPAN=-1;SUBN=1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:22:28:5.3:64.7,0,5.3:20:12:-67.65:67.65\n5\t40662832\t288928:1\tT\tT]5:40709960]\t29\tPASS\tDISC_MAPQ=57;EVDNC=DSCRD;IMPRECISE;MAPQ=57;MATEID=288928:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:40662832(+)-5:40709960(+)__5_40645501_40670501D;SPAN=47128;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:10:10:2.7:29.7,2.7,0:0:10:-29.71:29.71\n5\t40709960\t288928:2\tA\tA]5:40662832]\t29\tPASS\tDISC_MAPQ=35;EVDNC=DSCRD;IMPRECISE;MAPQ=35;MATEID=288928:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:40662832(+)-5:40709960(+)__5_40645501_40670501D;SPAN=47128;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:10:10:2.7:29.7,2.7,0:0:10:-29.71:29.71\n5\t40794513\t288988:1\tT\tT[5:40794877[\t85\tPASS\tEVDNC=ASSMB;INSERTION=AT;MAPQ=60;MATEID=288988:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_5_40792501_40817501_91C;SPAN=364;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:28:19:7.8:85.8,7.8,0:28:0:-85.82:85.82\n5\t40794877\t288988:2\tT\t]5:40794513]T\t85\tPASS\tEVDNC=ASSMB;INSERTION=AT;MAPQ=60;MATEID=288988:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_5_40792501_40817501_91C;SPAN=364;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:28:19:7.8:85.8,7.8,0:28:0:-85.82:85.82\n5\t41599348\t289232:1\tA\tA[5:41600022[\t29\tPASS\tEVDNC=ASSMB;HOMSEQ=AGAAA;MAPQ=60;MATEID=289232:2;MATENM=1;NM=2;NUMPARTS=2;SCTG=c_5_41576501_41601501_158C;SPAN=674;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:37:29.3:29.3,0,62.3:12:0:-29.21:29.92\n5\t41600022\t289232:2\tA\t]5:41599348]A\t29\tPASS\tEVDNC=ASSMB;HOMSEQ=AGAAA;MAPQ=60;MATEID=289232:1;MATENM=2;NM=1;NUMPARTS=2;SCTG=c_5_41576501_41601501_158C;SPAN=674;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:37:29.3:29.3,0,62.3:12:0:-29.21:29.92\n5\t41603901\t289246:1\tA\tA[5:41604211[\t23\tPASS\tEVDNC=ASSMB;HOMSEQ=AACTCTGAGATGA;MAPQ=60;MATEID=289246:2;MATENM=4;NM=2;NUMPARTS=2;SCTG=c_5_41601001_41626001_59C;SPAN=310;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:34:23.6:23.6,0,59.9:10:0:-23.45:24.42\n5\t41604211\t289246:2\tA\t]5:41603901]A\t23\tPASS\tEVDNC=ASSMB;HOMSEQ=AACTCTGAGATGA;MAPQ=60;MATEID=289246:1;MATENM=2;NM=4;NUMPARTS=2;SCTG=c_5_41601001_41626001_59C;SPAN=310;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:34:23.6:23.6,0,59.9:10:0:-23.45:24.42\n5\t42165839\t289387:1\tT\tT[5:42167668[\t99\tPASS\tEVDNC=ASSMB;HOMSEQ=TTAAAACTTTGTT;MAPQ=60;MATEID=289387:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_5_42164501_42189501_125C;SPAN=1829;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:34:32:9.3:102.3,9.3,0:34:0:-102.3:102.3\n5\t42167668\t289387:2\tT\t]5:42165839]T\t99\tPASS\tEVDNC=ASSMB;HOMSEQ=TTAAAACTTTGTT;MAPQ=60;MATEID=289387:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_5_42164501_42189501_125C;SPAN=1829;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:34:32:9.3:102.3,9.3,0:34:0:-102.3:102.3\n5\t43063268\t289697:1\tG\t]6:51379339]G\t23\tPASS\tDISC_MAPQ=60;EVDNC=TSI_L;HOMSEQ=AAAGAAAG;INSERTION=GAA;MAPQ=60;MATEID=289697:2;MATENM=0;NM=6;NUMPARTS=3;REPSEQ=AAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGG;SCTG=c_5_43046501_43071501_75C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:19:8:4.8:23.4,4.8,0:8:11:-23.48:23.48\n5\t43086248\t409531:1\tC\t[7:80914418[C\t15\tPASS\tDISC_MAPQ=36;EVDNC=DSCRD;IMPRECISE;MAPQ=36;MATEID=409531:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:43086248(-)-7:80914418(-)__7_80899001_80924001D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:63:15.5:15.5,0,140.9:0:10:-15.3:21.37\n5\t43616951\t290284:1\tA\t]5:44910547]A\t37\tPASS\tEVDNC=ASSMB;HOMSEQ=AAA;MAPQ=60;MATEID=290284:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_5_44908501_44933501_7C;SPAN=1293596;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:21:14:37.1,0,14:13:0:-37.47:37.47\n5\t44910547\t290284:2\tA\tA[5:43616951[\t37\tPASS\tEVDNC=ASSMB;HOMSEQ=AAA;MAPQ=60;MATEID=290284:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_5_44908501_44933501_7C;SPAN=1293596;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:21:14:37.1,0,14:13:0:-37.47:37.47\n5\t46144117\t290591:1\tG\tG[5:46145889[\t99\tPASS\tEVDNC=ASSMB;INSERTION=GTGAAAAA;MAPQ=60;MATEID=290591:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_5_46133501_46158501_27C;SPAN=1772;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:35:25:9.6:105.6,9.6,0:35:0:-105.6:105.6\n5\t46145889\t290591:2\tG\t]5:46144117]G\t99\tPASS\tEVDNC=ASSMB;INSERTION=GTGAAAAA;MAPQ=60;MATEID=290591:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_5_46133501_46158501_27C;SPAN=1772;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:35:25:9.6:105.6,9.6,0:35:0:-105.6:105.6\n5\t46164007\t290597:1\tA\tA[5:46164338[\t94\tPASS\tEVDNC=ASSMB;HOMSEQ=AAAAACTAGA;MAPQ=60;MATEID=290597:2;MATENM=7;NM=0;NUMPARTS=2;SCTG=c_5_46158001_46183001_87C;SPAN=331;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:32:39:2.3:94.7,0,2.3:32:0:-99.78:99.78\n5\t46164338\t290597:2\tA\t]5:46164007]A\t94\tPASS\tEVDNC=ASSMB;HOMSEQ=AAAAACTAGA;MAPQ=60;MATEID=290597:1;MATENM=0;NM=7;NUMPARTS=2;SCTG=c_5_46158001_46183001_87C;SPAN=331;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:32:39:2.3:94.7,0,2.3:32:0:-99.78:99.78\n5\t46270554\t290636:1\tT\tT[5:46275735[\t12\tPASS\tEVDNC=ASSMB;HOMSEQ=TTCT;MAPQ=60;MATEID=290636:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_5_46256001_46281001_34C;SPAN=5181;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:51:12.2:12.2,0,114.5:8:0:-12.07:17.05\n5\t46275735\t290636:2\tT\t]5:46270554]T\t12\tPASS\tEVDNC=ASSMB;HOMSEQ=TTCT;MAPQ=60;MATEID=290636:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_5_46256001_46281001_34C;SPAN=5181;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:51:12.2:12.2,0,114.5:8:0:-12.07:17.05\n5\t46405227\t290750:1\tT\tT[5:46410473[\t42\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=GACAGAAGCATTCTCAGAAACTTCTTTGTGATGTGTGCATT;MAPQ=60;MATEID=290750:2;MATENM=3;NM=1;NUMPARTS=2;SCTG=c_5_46403001_46428001_13C;SPAN=5246;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:16:38:42.2:42.2,0,52.1:8:11:-42.13:42.21\n5\t46410473\t290750:2\tG\t]5:46405227]G\t42\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=GACAGAAGCATTCTCAGAAACTTCTTTGTGATGTGTGCATT;MAPQ=60;MATEID=290750:1;MATENM=1;NM=3;NUMPARTS=2;SCTG=c_5_46403001_46428001_13C;SPAN=5246;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:16:38:42.2:42.2,0,52.1:8:11:-42.13:42.21\n5\t46491020\t290851:1\tA\t]5:46539787]A\t26\tPASS\tDISC_MAPQ=48;EVDNC=DSCRD;IMPRECISE;MAPQ=48;MATEID=290851:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:46491020(-)-5:46539787(+)__5_46476501_46501501D;SPAN=48767;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:9:8:2.4:26.4,2.4,0:0:9:-26.41:26.41\n5\t46539787\t290851:2\tT\tT[5:46491020[\t26\tPASS\tDISC_MAPQ=22;EVDNC=DSCRD;IMPRECISE;MAPQ=22;MATEID=290851:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:46491020(-)-5:46539787(+)__5_46476501_46501501D;SPAN=48767;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:9:8:2.4:26.4,2.4,0:0:9:-26.41:26.41\n5\t46540265\t291753:1\tA\t]5:46649184]A\t33\tPASS\tDISC_MAPQ=22;EVDNC=ASDIS;HOMSEQ=AAGCATTCTCAGAAACTTCTT;MAPQ=60;MATEID=291753:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_5_46648001_46673001_470C;SPAN=108919;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:11:5:3:33,3,0:8:3:-33.01:33.01\n5\t46565779\t291959:1\tT\tT[5:46736987[\t29\tPASS\tDISC_MAPQ=20;EVDNC=DSCRD;IMPRECISE;MAPQ=20;MATEID=291959:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:46565779(+)-5:46736987(-)__5_46721501_46746501D;SPAN=171208;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:10:2:2.7:29.7,2.7,0:0:10:-29.71:29.71\n5\t46571621\t291810:1\tG\tG[5:46689519[\t23\tPASS\tDISC_MAPQ=53;EVDNC=DSCRD;IMPRECISE;MAPQ=53;MATEID=291810:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:46571621(+)-5:46689519(-)__5_46672501_46697501D;SPAN=117898;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:10:0.5:23.6,0,0.5:0:8:-24.74:24.74\n5\t46649184\t291753:2\tT\tT[5:46540265[\t33\tPASS\tDISC_MAPQ=43;EVDNC=ASDIS;HOMSEQ=AAGCATTCTCAGAAACTTCTT;MAPQ=46;MATEID=291753:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_5_46648001_46673001_470C;SPAN=108919;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:11:5:3:33,3,0:8:3:-33.01:33.01\n5\t46658868\t292044:1\tA\t]5:46783997]A\t54\tPASS\tDISC_MAPQ=50;EVDNC=DSCRD;IMPRECISE;MAPQ=50;MATEID=292044:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:46658868(-)-5:46783997(+)__5_46770501_46795501D;SPAN=125129;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:19:29:18.2:54.5,0,18.2:0:19:-55.55:55.55\n5\t46659126\t291914:1\tG\tG[5:46708874[\t69\tPASS\tDISC_MAPQ=51;EVDNC=DSCRD;IMPRECISE;MAPQ=51;MATEID=291914:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:46659126(+)-5:46708874(-)__5_46697001_46722001D;SPAN=49748;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:23:20:6.3:69.3,6.3,0:0:23:-69.32:69.32\n5\t46689519\t291810:2\tT\t]5:46571621]T\t23\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=291810:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:46571621(+)-5:46689519(-)__5_46672501_46697501D;SPAN=117898;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:10:0.5:23.6,0,0.5:0:8:-24.74:24.74\n5\t46692541\t291853:1\tA\tA[5:46692991[\t89\tPASS\tDISC_MAPQ=47;EVDNC=ASDIS;HOMSEQ=AAACTAGACAGAAGCATTCTCAGAAACTGCTTTGTGATGTGTGCATTTAACTCACAGACTTGA;MAPQ=60;MATEID=291853:2;MATENM=3;NM=4;NUMPARTS=2;SCTG=c_5_46672501_46697501_418C;SPAN=450;SUBN=1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:29:28:8.1:89.1,8.1,0:22:11:-89.12:89.12\n5\t46692991\t291853:2\tA\t]5:46692541]A\t89\tPASS\tDISC_MAPQ=22;EVDNC=ASDIS;HOMSEQ=AAACTAGACAGAAGCATTCTCAGAAACTGCTTTGTGATGTGTGCATTTAACTCACAGACTTGA;MAPQ=0;MATEID=291853:1;MATENM=4;NM=3;NUMPARTS=2;SCTG=c_5_46672501_46697501_418C;SPAN=450;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:29:28:8.1:89.1,8.1,0:22:11:-89.12:89.12\n5\t46708874\t291914:2\tT\t]5:46659126]T\t69\tPASS\tDISC_MAPQ=52;EVDNC=DSCRD;IMPRECISE;MAPQ=52;MATEID=291914:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:46659126(+)-5:46708874(-)__5_46697001_46722001D;SPAN=49748;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:23:20:6.3:69.3,6.3,0:0:23:-69.32:69.32\n5\t46736987\t291959:2\tA\t]5:46565779]A\t29\tPASS\tDISC_MAPQ=22;EVDNC=DSCRD;IMPRECISE;MAPQ=22;MATEID=291959:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:46565779(+)-5:46736987(-)__5_46721501_46746501D;SPAN=171208;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:10:2:2.7:29.7,2.7,0:0:10:-29.71:29.71\n5\t46783997\t292044:2\tA\tA[5:46658868[\t54\tPASS\tDISC_MAPQ=56;EVDNC=DSCRD;IMPRECISE;MAPQ=56;MATEID=292044:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:46658868(-)-5:46783997(+)__5_46770501_46795501D;SPAN=125129;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:19:29:18.2:54.5,0,18.2:0:19:-55.55:55.55\n5\t46912885\t292214:1\tT\t]5:47020460]T\t75\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TAAAAACTAGACAGAAGCA;MAPQ=60;MATEID=292214:2;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_5_47015501_47040501_88C;SPAN=107575;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:25:8:6.9:75.9,6.9,0:21:4:-75.92:75.92\n5\t46926344\t292248:1\tC\t[5:47075336[C\t69\tPASS\tDISC_MAPQ=21;EVDNC=DSCRD;IMPRECISE;MAPQ=21;MATEID=292248:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:46926344(-)-5:47075336(-)__5_47064501_47089501D;SPAN=148992;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:23:3:6.3:69.3,6.3,0:0:23:-69.32:69.32\n5\t47020460\t292214:2\tA\tA[5:46912885[\t75\tPASS\tDISC_MAPQ=57;EVDNC=ASDIS;HOMSEQ=TAAAAACTAGACAGAAGCA;MAPQ=60;MATEID=292214:1;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_5_47015501_47040501_88C;SPAN=107575;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:25:8:6.9:75.9,6.9,0:21:4:-75.92:75.92\n5\t47075336\t292248:2\tC\t[5:46926344[C\t69\tPASS\tDISC_MAPQ=19;EVDNC=DSCRD;IMPRECISE;MAPQ=19;MATEID=292248:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:46926344(-)-5:47075336(-)__5_47064501_47089501D;SPAN=148992;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:23:3:6.3:69.3,6.3,0:0:23:-69.32:69.32\n5\t47172599\t847754:1\tT\t]19:24896904]T\t41\tPASS\tDISC_MAPQ=31;EVDNC=DSCRD;IMPRECISE;MAPQ=31;MATEID=847754:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:47172599(-)-19:24896904(+)__19_24892001_24917001D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:17:54:41:41,0,93.8:0:17:-40.94:42.13\n5\t49623939\t292697:2\tG\tG]1:123283955]\t33\tPASS\tDISC_MAPQ=18;EVDNC=DSCRD;IMPRECISE;MAPQ=18;MATEID=292697:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:123283955(+)-5:49623939(+)__5_49612501_49637501D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:11:9:3:33,3,0:0:11:-33.01:33.01\n5\t49691392\t292720:1\tC\t]5:49693519]C\t35\tPASS\tDISC_MAPQ=36;EVDNC=DSCRD;IMPRECISE;MAPQ=36;MATEID=292720:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:49691392(-)-5:49693519(+)__5_49686001_49711001D;SPAN=2127;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:26:29:35.6,0,29:0:13:-35.63:35.63\n5\t49693479\t292728:1\tG\tG[5:49702819[\t20\tPASS\tDISC_MAPQ=34;EVDNC=DSCRD;IMPRECISE;MAPQ=34;MATEID=292728:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:49693479(+)-5:49702819(-)__5_49686001_49711001D;SPAN=9340;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:32:20.9:20.9,0,57.2:0:9:-20.71:21.77\n5\t49693519\t292720:2\tT\tT[5:49691392[\t35\tPASS\tDISC_MAPQ=19;EVDNC=DSCRD;IMPRECISE;MAPQ=19;MATEID=292720:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:49691392(-)-5:49693519(+)__5_49686001_49711001D;SPAN=2127;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:26:29:35.6,0,29:0:13:-35.63:35.63\n5\t49702819\t292728:2\tT\t]5:49693479]T\t20\tPASS\tDISC_MAPQ=30;EVDNC=DSCRD;IMPRECISE;MAPQ=30;MATEID=292728:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:49693479(+)-5:49702819(-)__5_49686001_49711001D;SPAN=9340;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:32:20.9:20.9,0,57.2:0:9:-20.71:21.77\n5\t49723328\t293173:1\tC\t]5:49895193]C\t7\tPASS\tDISC_MAPQ=37;EVDNC=DSCRD;IMPRECISE;MAPQ=37;MATEID=293173:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:49723328(-)-5:49895193(+)__5_49882001_49907001D;SPAN=171865;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:68:7.4:7.4,0,162.5:0:8:-7.294:15.98\n5\t49770437\t293175:1\tG\t]5:49886143]G\t42\tPASS\tDISC_MAPQ=39;EVDNC=DSCRD;IMPRECISE;MAPQ=39;MATEID=293175:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:49770437(-)-5:49886143(+)__5_49882001_49907001D;SPAN=115706;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:14:5:3.9:42.9,3.9,0:0:14:-42.91:42.91\n5\t49800374\t293088:1\tT\tT[5:49853433[\t43\tPASS\tDISC_MAPQ=20;EVDNC=DSCRD;IMPRECISE;MAPQ=20;MATEID=293088:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:49800374(+)-5:49853433(-)__5_49833001_49858001D;SPAN=53059;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:15:23:13.4:43.1,0,13.4:0:15:-43.8:43.8\n5\t49816583\t293323:1\tA\tA[5:49957574[\t33\tPASS\tDISC_MAPQ=25;EVDNC=DSCRD;IMPRECISE;MAPQ=25;MATEID=293323:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:49816583(+)-5:49957574(-)__5_49955501_49980501D;SPAN=140991;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:11:11:3:33,3,0:0:11:-33.01:33.01\n5\t49853433\t293088:2\tA\t]5:49800374]A\t43\tPASS\tDISC_MAPQ=31;EVDNC=DSCRD;IMPRECISE;MAPQ=31;MATEID=293088:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:49800374(+)-5:49853433(-)__5_49833001_49858001D;SPAN=53059;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:15:23:13.4:43.1,0,13.4:0:15:-43.8:43.8\n5\t49853709\t293181:1\tT\tT[5:49895540[\t79\tPASS\tDISC_MAPQ=31;EVDNC=DSCRD;IMPRECISE;MAPQ=31;MATEID=293181:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:49853709(+)-5:49895540(-)__5_49882001_49907001D;SPAN=41831;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:26:5:7.2:79.2,7.2,0:0:26:-79.22:79.22\n5\t49886143\t293175:2\tG\tG[5:49770437[\t42\tPASS\tDISC_MAPQ=19;EVDNC=DSCRD;IMPRECISE;MAPQ=19;MATEID=293175:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:49770437(-)-5:49886143(+)__5_49882001_49907001D;SPAN=115706;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:14:5:3.9:42.9,3.9,0:0:14:-42.91:42.91\n5\t49895193\t293173:2\tG\tG[5:49723328[\t7\tPASS\tDISC_MAPQ=31;EVDNC=DSCRD;IMPRECISE;MAPQ=31;MATEID=293173:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:49723328(-)-5:49895193(+)__5_49882001_49907001D;SPAN=171865;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:68:7.4:7.4,0,162.5:0:8:-7.294:15.98\n5\t49895540\t293181:2\tG\t]5:49853709]G\t79\tPASS\tDISC_MAPQ=35;EVDNC=DSCRD;IMPRECISE;MAPQ=35;MATEID=293181:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:49853709(+)-5:49895540(-)__5_49882001_49907001D;SPAN=41831;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:26:5:7.2:79.2,7.2,0:0:26:-79.22:79.22\n5\t49937653\t293336:1\tG\tG[5:49958078[\t99\tPASS\tDISC_MAPQ=54;EVDNC=ASDIS;HOMSEQ=TAAAAACTAGAAAGAAG;MAPQ=60;MATEID=293336:2;MATENM=1;NM=4;NUMPARTS=2;SCTG=c_5_49955501_49980501_848C;SPAN=20425;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:45:9:12.6:138.6,12.6,0:40:12:-138.6:138.6\n5\t49957574\t293323:2\tT\t]5:49816583]T\t33\tPASS\tDISC_MAPQ=38;EVDNC=DSCRD;IMPRECISE;MAPQ=38;MATEID=293323:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:49816583(+)-5:49957574(-)__5_49955501_49980501D;SPAN=140991;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:11:11:3:33,3,0:0:11:-33.01:33.01\n5\t49958078\t293336:2\tT\t]5:49937653]T\t99\tPASS\tDISC_MAPQ=55;EVDNC=ASDIS;HOMSEQ=TAAAAACTAGAAAGAAG;MAPQ=60;MATEID=293336:1;MATENM=4;NM=1;NUMPARTS=2;SCTG=c_5_49955501_49980501_848C;SPAN=20425;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:45:9:12.6:138.6,12.6,0:40:12:-138.6:138.6\n5\t51925610\t201766:2\tC\t[3:166722402[C\t57\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=201766:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=3:166722402(-)-5:51925610(-)__3_166698001_166723001D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:20:31:17.9:57.5,0,17.9:0:20:-58.24:58.24\n5\t53611921\t686826:1\tA\tA]14:20254838]\t36\tPASS\tDISC_MAPQ=48;EVDNC=ASDIS;INSERTION=CAACTT;MAPQ=60;MATEID=686826:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_20237001_20262001_59C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:11:12:3.3:36.3,3.3,0:7:4:-35.86:35.86\n5\t53826784\t294974:1\tG\t[5:53829682[G\t92\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;INSERTION=TAAT;MAPQ=60;MATEID=294974:2;MATENM=4;NM=0;NUMPARTS=2;SCTG=c_5_53826501_53851501_3C;SPAN=2898;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:30:28:8.4:92.4,8.4,0:25:6:-92.42:92.42\n5\t53826933\t294975:1\tG\tG]5:53829655]\t85\tPASS\tEVDNC=ASSMB;INSERTION=CTAACTGAA;MAPQ=60;MATEID=294975:2;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_5_53826501_53851501_1C;SPAN=2722;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:27:28:7.8:85.8,7.8,0:27:0:-85.82:85.82\n5\t53829655\t294975:2\tA\tA]5:53826933]\t85\tPASS\tEVDNC=ASSMB;INSERTION=CTAACTGAA;MAPQ=60;MATEID=294975:1;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_5_53826501_53851501_1C;SPAN=2722;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:27:28:7.8:85.8,7.8,0:27:0:-85.82:85.82\n5\t53829682\t294974:2\tT\t[5:53826784[T\t92\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;INSERTION=TAAT;MAPQ=60;MATEID=294974:1;MATENM=0;NM=4;NUMPARTS=2;SCTG=c_5_53826501_53851501_3C;SPAN=2898;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:30:28:8.4:92.4,8.4,0:25:6:-92.42:92.42\n5\t56133424\t295612:1\tG\tG[5:56134520[\t82\tPASS\tDISC_MAPQ=54;EVDNC=ASDIS;HOMSEQ=AGTGAGCCGAGATCGTGTCATTGCACTCCAGCCTGGGTGACAGAG;MAPQ=60;MATEID=295612:2;MATENM=1;NM=3;NUMPARTS=2;SCTG=c_5_56129501_56154501_23C;SPAN=1096;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:27:3:7.5:82.5,7.5,0:9:21:-82.52:82.52\n5\t56134520\t295612:2\tA\t]5:56133424]A\t82\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AGTGAGCCGAGATCGTGTCATTGCACTCCAGCCTGGGTGACAGAG;MAPQ=60;MATEID=295612:1;MATENM=3;NM=1;NUMPARTS=2;SCTG=c_5_56129501_56154501_23C;SPAN=1096;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:27:3:7.5:82.5,7.5,0:9:21:-82.52:82.52\n5\t56152290\t295608:2\tA\t[1:150621245[A\t26\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=295608:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:150621245(-)-5:56152290(-)__5_56129501_56154501D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:12:3.2:26.3,0,3.2:0:9:-27.29:27.29\n5\t58027770\t296201:1\tG\tG[5:58037951[\t75\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=296201:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:58027770(+)-5:58037951(-)__5_58016001_58041001D;SPAN=10181;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:25:5:6.9:75.9,6.9,0:0:25:-75.92:75.92\n5\t58037951\t296201:2\tG\t]5:58027770]G\t75\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=296201:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:58027770(+)-5:58037951(-)__5_58016001_58041001D;SPAN=10181;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:25:5:6.9:75.9,6.9,0:0:25:-75.92:75.92\n5\t58384174\t296299:1\tC\tC[5:58390275[\t99\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AAAAAACAC;MAPQ=60;MATEID=296299:2;MATENM=2;NM=11;NUMPARTS=2;SCTG=c_5_58359001_58384001_4C;SPAN=6101;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:39:0:10.8:118.8,10.8,0:27:18:-118.8:118.8\n5\t58390275\t296299:2\tA\t]5:58384174]A\t99\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AAAAAACAC;MAPQ=60;MATEID=296299:1;MATENM=11;NM=2;NUMPARTS=2;SCTG=c_5_58359001_58384001_4C;SPAN=6101;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:39:0:10.8:118.8,10.8,0:27:18:-118.8:118.8\n5\t59692316\t409711:1\tT\t[7:81172709[T\t59\tPASS\tDISC_MAPQ=50;EVDNC=DSCRD;IMPRECISE;MAPQ=50;MATEID=409711:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:59692316(-)-7:81172709(-)__7_81168501_81193501D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:20:12:5.4:59.4,5.4,0:0:20:-59.41:59.41\n5\t59692516\t409712:1\tG\tG]7:81172281]\t25\tPASS\tDISC_MAPQ=51;EVDNC=DSCRD;IMPRECISE;MAPQ=51;MATEID=409712:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:59692516(+)-7:81172281(+)__7_81168501_81193501D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:40:25.1:25.1,0,74.6:0:11:-25.07:26.48\n5\t60193637\t296744:1\tA\tA[5:60201074[\t25\tPASS\tDISC_MAPQ=49;EVDNC=DSCRD;IMPRECISE;MAPQ=49;MATEID=296744:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:60193637(+)-5:60201074(-)__5_60196501_60221501D;SPAN=7437;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:15:12.2:25.4,0,12.2:0:9:-25.74:25.74\n5\t60200548\t296747:1\tA\t]5:60201294]A\t28\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=296747:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:60200548(-)-5:60201294(+)__5_60196501_60221501D;SPAN=746;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:18:14.9:28.1,0,14.9:0:10:-28.08:28.08\n5\t60201074\t296744:2\tT\t]5:60193637]T\t25\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=296744:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:60193637(+)-5:60201074(-)__5_60196501_60221501D;SPAN=7437;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:15:12.2:25.4,0,12.2:0:9:-25.74:25.74\n5\t60201294\t296747:2\tA\tA[5:60200548[\t28\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=296747:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:60200548(-)-5:60201294(+)__5_60196501_60221501D;SPAN=746;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:18:14.9:28.1,0,14.9:0:10:-28.08:28.08\n5\t60633808\t296852:1\tG\t]5:60761656]G\t92\tPASS\tEVDNC=ASSMB;HOMSEQ=GTG;MAPQ=60;MATEID=296852:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_5_60760001_60785001_10C;SPAN=127848;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:30:24:8.4:92.4,8.4,0:30:0:-92.42:92.42\n5\t60706002\t296834:1\tG\tG[5:60707838[\t99\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=296834:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:60706002(+)-5:60707838(-)__5_60686501_60711501D;SPAN=1836;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:68:13:18.9:207.9,18.9,0:0:68:-208:208\n5\t60707838\t296834:2\tC\t]5:60706002]C\t99\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=296834:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:60706002(+)-5:60707838(-)__5_60686501_60711501D;SPAN=1836;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:68:13:18.9:207.9,18.9,0:0:68:-208:208\n5\t60761656\t296852:2\tG\tG[5:60633808[\t92\tPASS\tEVDNC=ASSMB;HOMSEQ=GTG;MAPQ=60;MATEID=296852:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_5_60760001_60785001_10C;SPAN=127848;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:30:24:8.4:92.4,8.4,0:30:0:-92.42:92.42\n5\t61453878\t297015:1\tC\tC[5:61458570[\t56\tPASS\tEVDNC=ASSMB;INSERTION=AGTGAGG;MAPQ=60;MATEID=297015:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_5_61446001_61471001_20C;SPAN=4692;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:17:19:5.1:56.1,5.1,0:17:0:-54.78:54.78\n5\t61458570\t297015:2\tC\t]5:61453878]C\t56\tPASS\tEVDNC=ASSMB;INSERTION=AGTGAGG;MAPQ=60;MATEID=297015:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_5_61446001_61471001_20C;SPAN=4692;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:17:19:5.1:56.1,5.1,0:17:0:-54.78:54.78\n5\t62354497\t297206:1\tT\t]5:62433917]T\t89\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;MAPQ=60;MATEID=297206:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_5_62426001_62451001_9C;SPAN=79420;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:29:22:8.1:89.1,8.1,0:16:21:-89.12:89.12\n5\t62433917\t297206:2\tG\tG[5:62354497[\t89\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;MAPQ=60;MATEID=297206:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_5_62426001_62451001_9C;SPAN=79420;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:29:22:8.1:89.1,8.1,0:16:21:-89.12:89.12\n5\t63277564\t297467:1\tC\tC[5:63614896[\t32\tPASS\tDISC_MAPQ=45;EVDNC=DSCRD;IMPRECISE;MAPQ=45;MATEID=297467:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:63277564(+)-5:63614896(-)__5_63602001_63627001D;SPAN=337332;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:15:5.6:32,0,5.6:0:11:-33.15:33.15\n5\t63614896\t297467:2\tC\t]5:63277564]C\t32\tPASS\tDISC_MAPQ=38;EVDNC=DSCRD;IMPRECISE;MAPQ=38;MATEID=297467:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:63277564(+)-5:63614896(-)__5_63602001_63627001D;SPAN=337332;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:15:5.6:32,0,5.6:0:11:-33.15:33.15\n5\t65172244\t297711:2\tC\tC]2:68687723]\t26\tPASS\tDISC_MAPQ=58;EVDNC=DSCRD;IMPRECISE;MAPQ=58;MATEID=297711:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=2:68687723(+)-5:65172244(+)__5_65170001_65195001D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:8:9:2.4:26.4,2.4,0:0:8:-25.7:25.7\n5\t73537389\t299585:1\tT\t]5:73672251]T\t22\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=299585:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:73537389(-)-5:73672251(+)__5_73671501_73696501D;SPAN=134862;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:16:15.5:22.1,0,15.5:0:8:-21.93:21.93\n5\t73672251\t299585:2\tA\tA[5:73537389[\t22\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=299585:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:73537389(-)-5:73672251(+)__5_73671501_73696501D;SPAN=134862;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:16:15.5:22.1,0,15.5:0:8:-21.93:21.93\n5\t77477364\t300231:1\tA\tA[5:77611313[\t23\tPASS\tDISC_MAPQ=20;EVDNC=DSCRD;IMPRECISE;MAPQ=20;MATEID=300231:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:77477364(+)-5:77611313(-)__5_77469001_77494001D;SPAN=133949;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:12:6.5:23,0,6.5:0:8:-23.49:23.49\n5\t77611313\t300231:2\tA\t]5:77477364]A\t23\tPASS\tDISC_MAPQ=20;EVDNC=DSCRD;IMPRECISE;MAPQ=20;MATEID=300231:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:77477364(+)-5:77611313(-)__5_77469001_77494001D;SPAN=133949;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:12:6.5:23,0,6.5:0:8:-23.49:23.49\n5\t78814094\t300539:1\tT\tT[5:78816047[\t72\tPASS\tDISC_MAPQ=57;EVDNC=DSCRD;IMPRECISE;MAPQ=57;MATEID=300539:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:78814094(+)-5:78816047(-)__5_78792001_78817001D;SPAN=1953;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:24:6:6.6:72.6,6.6,0:0:24:-72.62:72.62\n5\t78816047\t300539:2\tT\t]5:78814094]T\t72\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=300539:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:78814094(+)-5:78816047(-)__5_78792001_78817001D;SPAN=1953;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:24:6:6.6:72.6,6.6,0:0:24:-72.62:72.62\n5\t78980940\t300584:1\tT\tT[5:78981250[\t99\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=GAATTTCTAGTTCTT;MAPQ=60;MATEID=300584:2;MATENM=3;NM=2;NUMPARTS=2;SCTG=c_5_78963501_78988501_19C;SPAN=310;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:36:15:9.9:108.9,9.9,0:25:15:-108.9:108.9\n5\t78981250\t300584:2\tG\t]5:78980940]G\t99\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=GAATTTCTAGTTCTT;MAPQ=60;MATEID=300584:1;MATENM=2;NM=3;NUMPARTS=2;SCTG=c_5_78963501_78988501_19C;SPAN=310;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:36:15:9.9:108.9,9.9,0:25:15:-108.9:108.9\n5\t81712362\t301309:1\tA\tA[5:81712619[\t52\tPASS\tEVDNC=ASSMB;HOMSEQ=AAAAAATAAAGATTACA;MAPQ=60;MATEID=301309:2;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_5_81707501_81732501_9C;SPAN=257;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:18:14:4.8:52.8,4.8,0:18:0:-52.81:52.81\n5\t81712619\t301309:2\tA\t]5:81712362]A\t52\tPASS\tEVDNC=ASSMB;HOMSEQ=AAAAAATAAAGATTACA;MAPQ=60;MATEID=301309:1;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_5_81707501_81732501_9C;SPAN=257;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:18:14:4.8:52.8,4.8,0:18:0:-52.81:52.81\n5\t89611142\t302952:1\tA\t]5:89618185]A\t16\tPASS\tEVDNC=ASSMB;HOMSEQ=AT;MAPQ=52;MATEID=302952:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_5_89596501_89621501_23C;SPAN=7043;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:36:16.4:16.4,0,72.5:8:0:-16.29:18.4\n5\t89618185\t302952:2\tT\tT[5:89611142[\t16\tPASS\tEVDNC=ASSMB;HOMSEQ=AT;MAPQ=52;MATEID=302952:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_5_89596501_89621501_23C;SPAN=7043;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:36:16.4:16.4,0,72.5:8:0:-16.29:18.4\n5\t91204065\t303333:1\tA\tA[5:91206278[\t79\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=303333:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:91204065(+)-5:91206278(-)__5_91189001_91214001D;SPAN=2213;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:26:5:7.2:79.2,7.2,0:0:26:-79.22:79.22\n5\t91206278\t303333:2\tA\t]5:91204065]A\t79\tPASS\tDISC_MAPQ=58;EVDNC=DSCRD;IMPRECISE;MAPQ=58;MATEID=303333:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:91204065(+)-5:91206278(-)__5_91189001_91214001D;SPAN=2213;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:26:5:7.2:79.2,7.2,0:0:26:-79.22:79.22\n5\t91278320\t303358:1\tC\t]5:91280018]C\t61\tPASS\tDISC_MAPQ=51;EVDNC=ASDIS;HOMSEQ=C;MAPQ=60;MATEID=303358:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_5_91262501_91287501_8C;SPAN=1698;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:21:28:8.6:61.4,0,8.6:15:13:-63.69:63.69\n5\t91278885\t303359:1\tT\tT[5:91279170[\t82\tPASS\tDISC_MAPQ=54;EVDNC=ASDIS;HOMSEQ=TCTCTCTTT;MAPQ=60;MATEID=303359:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_5_91262501_91287501_27C;SPAN=285;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:27:21:7.5:82.5,7.5,0:15:16:-82.52:82.52\n5\t91279170\t303359:2\tT\t]5:91278885]T\t82\tPASS\tDISC_MAPQ=57;EVDNC=ASDIS;HOMSEQ=TCTCTCTTT;MAPQ=60;MATEID=303359:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_5_91262501_91287501_27C;SPAN=285;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:27:21:7.5:82.5,7.5,0:15:16:-82.52:82.52\n5\t91280018\t303358:2\tC\tC[5:91278320[\t61\tPASS\tDISC_MAPQ=53;EVDNC=ASDIS;HOMSEQ=C;MAPQ=60;MATEID=303358:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_5_91262501_91287501_8C;SPAN=1698;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:21:28:8.6:61.4,0,8.6:15:13:-63.69:63.69\n5\t94472477\t303817:2\tG\t[5:11655906[G\t23\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;MAPQ=60;MATEID=303817:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_5_94472001_94497001_10C;SPAN=82816571;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:10:0.5:23.6,0,0.5:6:4:-24.74:24.74\n5\t98524537\t916269:1\tA\tA]22:28669971]\t15\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=916269:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:98524537(+)-22:28669971(+)__22_28665001_28690001D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:74:15.5:15.5,0,170.6:0:11:-15.51:23.17\n5\t99009529\t304939:1\tG\tG[5:99011777[\t92\tPASS\tDISC_MAPQ=53;EVDNC=DSCRD;IMPRECISE;MAPQ=53;MATEID=304939:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:99009529(+)-5:99011777(-)__5_99004501_99029501D;SPAN=2248;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:31:4:8.4:92.4,8.4,0:0:31:-92.42:92.42\n5\t99011777\t304939:2\tC\t]5:99009529]C\t92\tPASS\tDISC_MAPQ=45;EVDNC=DSCRD;IMPRECISE;MAPQ=45;MATEID=304939:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:99009529(+)-5:99011777(-)__5_99004501_99029501D;SPAN=2248;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:31:4:8.4:92.4,8.4,0:0:31:-92.42:92.42\n5\t99532345\t305053:1\tT\tT[5:99533288[\t85\tPASS\tDISC_MAPQ=49;EVDNC=ASDIS;HOMSEQ=TGGTGAAACCCCGTCTCTACTAAAAATACAAAAATT;MAPQ=60;MATEID=305053:2;MATENM=7;NM=0;NUMPARTS=2;SCTG=c_5_99519001_99544001_64C;SPAN=943;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:28:9:7.8:85.8,7.8,0:15:14:-85.82:85.82\n5\t99533288\t305053:2\tT\t]5:99532345]T\t85\tPASS\tDISC_MAPQ=5;EVDNC=ASDIS;HOMSEQ=TGGTGAAACCCCGTCTCTACTAAAAATACAAAAATT;MAPQ=60;MATEID=305053:1;MATENM=0;NM=7;NUMPARTS=2;SCTG=c_5_99519001_99544001_64C;SPAN=943;SVT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GQ:PL:SR:DR:LR:LO\t0/1:19:23:0.2:56.3,0,0.2:19:0:-59.38:59.38\n5\t115422193\t308409:2\tC\t]5:115420818]C\t56\tPASS\tEVDNC=ASSMB;HOMSEQ=CTATCTCTTGTTTTCTT;MAPQ=60;MATEID=308409:1;MATENM=1;NM=7;NUMPARTS=2;SCTG=c_5_115419501_115444501_4C;SPAN=1375;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:19:23:0.2:56.3,0,0.2:19:0:-59.38:59.38\n5\t115842122\t57747:2\tC\tC]1:214483362]\t28\tPASS\tDISC_MAPQ=51;EVDNC=DSCRD;IMPRECISE;MAPQ=51;MATEID=57747:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:214483362(+)-5:115842122(+)__1_214473001_214498001D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:16:8.9:28.7,0,8.9:0:10:-28.89:28.89\n5\t115903112\t308531:1\tT\tT[5:115913380[\t25\tPASS\tDISC_MAPQ=25;EVDNC=DSCRD;IMPRECISE;MAPQ=25;MATEID=308531:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:115903112(+)-5:115913380(-)__5_115885001_115910001D;SPAN=10268;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:15:12.2:25.4,0,12.2:0:9:-25.74:25.74\n5\t115913380\t308531:2\tC\t]5:115903112]C\t25\tPASS\tDISC_MAPQ=31;EVDNC=DSCRD;IMPRECISE;MAPQ=31;MATEID=308531:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:115903112(+)-5:115913380(-)__5_115885001_115910001D;SPAN=10268;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:15:12.2:25.4,0,12.2:0:9:-25.74:25.74\n5\t117973459\t308983:1\tG\t]5:117973635]G\t13\tPASS\tEVDNC=ASSMB;INSERTION=TT;MAPQ=60;MATEID=308983:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_5_117967501_117992501_9C;SPAN=176;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:7:34:13.7:13.7,0,69.8:7:0:-13.55:15.84\n5\t117973635\t308983:2\tC\tC[5:117973459[\t13\tPASS\tEVDNC=ASSMB;INSERTION=TT;MAPQ=60;MATEID=308983:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_5_117967501_117992501_9C;SPAN=176;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:7:34:13.7:13.7,0,69.8:7:0:-13.55:15.84\n5\t119702489\t309320:1\tG\tG[5:119705996[\t46\tPASS\tDISC_MAPQ=53;EVDNC=DSCRD;IMPRECISE;MAPQ=53;MATEID=309320:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:119702489(+)-5:119705996(-)__5_119682501_119707501D;SPAN=3507;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:15:3:4.2:46.2,4.2,0:0:15:-46.21:46.21\n5\t119705996\t309320:2\tG\t]5:119702489]G\t46\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=309320:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:119702489(+)-5:119705996(-)__5_119682501_119707501D;SPAN=3507;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:15:3:4.2:46.2,4.2,0:0:15:-46.21:46.21\n5\t120044567\t309394:1\tG\tG[5:120046985[\t62\tPASS\tDISC_MAPQ=56;EVDNC=DSCRD;IMPRECISE;MAPQ=56;MATEID=309394:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:120044567(+)-5:120046985(-)__5_120025501_120050501D;SPAN=2418;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:21:5:5.7:62.7,5.7,0:0:21:-62.72:62.72\n5\t120046985\t309394:2\tT\t]5:120044567]T\t62\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=309394:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:120044567(+)-5:120046985(-)__5_120025501_120050501D;SPAN=2418;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:21:5:5.7:62.7,5.7,0:0:21:-62.72:62.72\n5\t128071820\t310985:1\tC\tC[5:128075224[\t75\tPASS\tDISC_MAPQ=57;EVDNC=DSCRD;IMPRECISE;MAPQ=57;MATEID=310985:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:128071820(+)-5:128075224(-)__5_128061501_128086501D;SPAN=3404;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:25:4:6.9:75.9,6.9,0:0:25:-75.92:75.92\n5\t128075224\t310985:2\tA\t]5:128071820]A\t75\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=310985:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:128071820(+)-5:128075224(-)__5_128061501_128086501D;SPAN=3404;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:25:4:6.9:75.9,6.9,0:0:25:-75.92:75.92\n5\t133583356\t311921:1\tA\tA[5:133589299[\t75\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=311921:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:133583356(+)-5:133589299(-)__5_133574001_133599001D;SPAN=5943;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:25:6:6.9:75.9,6.9,0:0:25:-75.92:75.92\n5\t133589299\t311921:2\tA\t]5:133583356]A\t75\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=311921:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:133583356(+)-5:133589299(-)__5_133574001_133599001D;SPAN=5943;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:25:6:6.9:75.9,6.9,0:0:25:-75.92:75.92\n5\t137519022\t312619:1\tG\tG[5:137520709[\t69\tPASS\tDISC_MAPQ=53;EVDNC=DSCRD;IMPRECISE;MAPQ=53;MATEID=312619:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:137519022(+)-5:137520709(-)__5_137518501_137543501D;SPAN=1687;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:23:5:6.3:69.3,6.3,0:0:23:-69.32:69.32\n5\t137520709\t312619:2\tG\t]5:137519022]G\t69\tPASS\tDISC_MAPQ=51;EVDNC=DSCRD;IMPRECISE;MAPQ=51;MATEID=312619:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:137519022(+)-5:137520709(-)__5_137518501_137543501D;SPAN=1687;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:23:5:6.3:69.3,6.3,0:0:23:-69.32:69.32\n5\t139452687\t313069:1\tN\tN[5:139453686[\t42\tPASS\tDISC_MAPQ=46;EVDNC=DSCRD;IMPRECISE;MAPQ=46;MATEID=313069:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:139452687(+)-5:139453686(-)__5_139454001_139479001D;SPAN=999;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:14:0:3.9:42.9,3.9,0:0:14:-42.91:42.91\n5\t139453686\t313069:2\tT\t]5:139452687]T\t42\tPASS\tDISC_MAPQ=53;EVDNC=DSCRD;IMPRECISE;MAPQ=53;MATEID=313069:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:139452687(+)-5:139453686(-)__5_139454001_139479001D;SPAN=999;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:14:0:3.9:42.9,3.9,0:0:14:-42.91:42.91\n5\t141632067\t313544:1\tA\t]5:142199822]A\t29\tPASS\tDISC_MAPQ=40;EVDNC=DSCRD;IMPRECISE;MAPQ=40;MATEID=313544:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:141632067(-)-5:142199822(+)__5_142198001_142223001D;SPAN=567755;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:10:6:2.7:29.7,2.7,0:0:10:-29.71:29.71\n5\t141632296\t313545:1\tA\tA[5:142199971[\t29\tPASS\tDISC_MAPQ=38;EVDNC=DSCRD;IMPRECISE;MAPQ=38;MATEID=313545:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:141632296(+)-5:142199971(-)__5_142198001_142223001D;SPAN=567675;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:10:7:2.7:29.7,2.7,0:0:10:-29.71:29.71\n5\t142077508\t677548:1\tA\tA[13:81793562[\t46\tPASS\tDISC_MAPQ=30;EVDNC=DSCRD;IMPRECISE;MAPQ=30;MATEID=677548:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:142077508(+)-13:81793562(-)__13_81781001_81806001D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:16:16:4.2:46.2,4.2,0:0:16:-46.21:46.21\n5\t142199822\t313544:2\tT\tT[5:141632067[\t29\tPASS\tDISC_MAPQ=54;EVDNC=DSCRD;IMPRECISE;MAPQ=54;MATEID=313544:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:141632067(-)-5:142199822(+)__5_142198001_142223001D;SPAN=567755;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:10:6:2.7:29.7,2.7,0:0:10:-29.71:29.71\n5\t142199971\t313545:2\tA\t]5:141632296]A\t29\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=313545:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:141632296(+)-5:142199971(-)__5_142198001_142223001D;SPAN=567675;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:10:7:2.7:29.7,2.7,0:0:10:-29.71:29.71\n5\t144132924\t313823:1\tA\t]5:144135488]A\t49\tPASS\tEVDNC=ASSMB;HOMSEQ=AG;MAPQ=60;MATEID=313823:2;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_5_144133501_144158501_0C;SPAN=2564;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:17:15:4.5:49.5,4.5,0:17:0:-49.51:49.51\n5\t144133302\t313820:1\tG\tG[5:144135483[\t89\tPASS\tEVDNC=ASSMB;INSERTION=GAATAAGCTC;MAPQ=60;MATEID=313820:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_5_144109001_144134001_1C;SPAN=2181;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:29:21:8.1:89.1,8.1,0:29:0:-89.12:89.12\n5\t144135483\t313820:2\tT\t]5:144133302]T\t89\tPASS\tEVDNC=ASSMB;INSERTION=GAATAAGCTC;MAPQ=60;MATEID=313820:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_5_144109001_144134001_1C;SPAN=2181;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:29:21:8.1:89.1,8.1,0:29:0:-89.12:89.12\n5\t144135488\t313823:2\tG\tG[5:144132924[\t49\tPASS\tEVDNC=ASSMB;HOMSEQ=AG;MAPQ=60;MATEID=313823:1;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_5_144133501_144158501_0C;SPAN=2564;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:17:15:4.5:49.5,4.5,0:17:0:-49.51:49.51\n5\t149173741\t603835:1\tG\t[11:99733408[G\t42\tPASS\tDISC_MAPQ=34;EVDNC=ASDIS;HOMSEQ=G;MAPQ=45;MATEID=603835:2;MATENM=13;NM=0;NUMPARTS=2;SCTG=c_11_99715001_99740001_7C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:14:5:3.9:42.9,3.9,0:9:6:-42.91:42.91\n5\t152076983\t315337:1\tA\tA[5:152082886[\t71\tPASS\tDISC_MAPQ=57;EVDNC=DSCRD;IMPRECISE;MAPQ=57;MATEID=315337:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:152076983(+)-5:152082886(-)__5_152071501_152096501D;SPAN=5903;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:25:40:28.4:71.3,0,28.4:0:25:-72.23:72.23\n5\t152082886\t315337:2\tA\t]5:152076983]A\t71\tPASS\tDISC_MAPQ=57;EVDNC=DSCRD;IMPRECISE;MAPQ=57;MATEID=315337:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:152076983(+)-5:152082886(-)__5_152071501_152096501D;SPAN=5903;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:25:40:28.4:71.3,0,28.4:0:25:-72.23:72.23\n5\t152131193\t315357:1\tT\t]5:152135135]T\t99\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TTGACAA;MAPQ=60;MATEID=315357:2;MATENM=3;NM=0;NUMPARTS=2;SCTG=c_5_152120501_152145501_9C;SPAN=3942;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:32:36:6.6:102.3,6.6,0:22:23:-102.8:102.8\n5\t152131457\t315358:1\tA\tA[5:152135133[\t92\tPASS\tDISC_MAPQ=60;EVDNC=TSI_L;HOMSEQ=CAA;MAPQ=60;MATEID=315358:2;MATENM=1;NM=1;NUMPARTS=3;REPSEQ=AA;SCTG=c_5_152120501_152145501_8C;SPAN=3676;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:28:30:8.4:92.4,8.4,0:24:9:-92.37:92.37\n5\t152131577\t315360:1\tC\tC[5:152139302[\t59\tPASS\tDISC_MAPQ=53;EVDNC=DSCRD;IMPRECISE;MAPQ=53;MATEID=315360:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:152131577(+)-5:152139302(-)__5_152120501_152145501D;SPAN=7725;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:20:13:5.4:59.4,5.4,0:0:20:-59.41:59.41\n5\t152135133\t315358:2\tC\t]5:152131457]C\t92\tPASS\tDISC_MAPQ=60;EVDNC=TSI_L;HOMSEQ=CAA;MAPQ=60;MATEID=315358:1;MATENM=1;NM=1;NUMPARTS=3;REPSEQ=AA;SCTG=c_5_152120501_152145501_8C;SPAN=3676;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:28:30:8.4:92.4,8.4,0:24:9:-92.37:92.37\n5\t152135135\t315357:2\tA\tA[5:152131193[\t99\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TTGACAA;MAPQ=60;MATEID=315357:1;MATENM=0;NM=3;NUMPARTS=2;SCTG=c_5_152120501_152145501_9C;SPAN=3942;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:32:36:6.6:102.3,6.6,0:22:23:-102.8:102.8\n5\t152135246\t315361:1\tT\tT[5:152139304[\t59\tPASS\tDISC_MAPQ=255;EVDNC=TSI_L;HOMSEQ=TCT;MAPQ=60;MATEID=315361:2;MATENM=4;NM=1;NUMPARTS=3;SCTG=c_5_152120501_152145501_8C;SPAN=4058;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:20:10:5.4:59.4,5.4,0:20:0:-59.41:59.41\n5\t152139302\t315360:2\tG\t]5:152131577]G\t59\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=315360:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:152131577(+)-5:152139302(-)__5_152120501_152145501D;SPAN=7725;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:20:13:5.4:59.4,5.4,0:0:20:-59.41:59.41\n5\t152139304\t315361:2\tT\t]5:152135246]T\t59\tPASS\tDISC_MAPQ=255;EVDNC=TSI_L;HOMSEQ=TCT;MAPQ=60;MATEID=315361:1;MATENM=1;NM=4;NUMPARTS=3;SCTG=c_5_152120501_152145501_8C;SPAN=4058;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:20:10:5.4:59.4,5.4,0:20:0:-59.41:59.41\n5\t155760325\t316002:1\tN\tN[5:155761324[\t49\tPASS\tDISC_MAPQ=59;EVDNC=ASDIS;HOMSEQ=AGCATCACCCTCTCCATCACCCTATTCATCATCCTCTCCATCATCCTCATCATCACTCTC;MAPQ=60;MATEID=316002:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_5_155746501_155771501_7C;SPAN=999;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:17:3:4.5:49.5,4.5,0:7:12:-49.51:49.51\n5\t155761324\t316002:2\tN\t]5:155760325]N\t49\tPASS\tDISC_MAPQ=45;EVDNC=ASDIS;HOMSEQ=AGCATCACCCTCTCCATCACCCTATTCATCATCCTCTCCATCATCCTCATCATCACTCTC;MAPQ=60;MATEID=316002:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_5_155746501_155771501_7C;SPAN=999;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:17:3:4.5:49.5,4.5,0:7:12:-49.51:49.51\n5\t161161852\t317139:1\tT\tT[5:161163317[\t39\tPASS\tDISC_MAPQ=59;EVDNC=DSCRD;IMPRECISE;MAPQ=59;MATEID=317139:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:161161852(+)-5:161163317(-)__5_161161001_161186001D;SPAN=1465;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:13:6:3.6:39.6,3.6,0:0:13:-39.61:39.61\n5\t161163317\t317139:2\tT\t]5:161161852]T\t39\tPASS\tDISC_MAPQ=50;EVDNC=DSCRD;IMPRECISE;MAPQ=50;MATEID=317139:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:161161852(+)-5:161163317(-)__5_161161001_161186001D;SPAN=1465;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:13:6:3.6:39.6,3.6,0:0:13:-39.61:39.61\n5\t167374629\t318555:1\tT\tT[5:167384020[\t29\tPASS\tEVDNC=ASSMB;HOMSEQ=T;MAPQ=60;MATEID=318555:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_5_167384001_167409001_4C;SPAN=9391;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:10:10:2.7:29.7,2.7,0:10:0:-29.71:29.71\n5\t167384020\t318555:2\tT\t]5:167374629]T\t29\tPASS\tEVDNC=ASSMB;HOMSEQ=T;MAPQ=60;MATEID=318555:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_5_167384001_167409001_4C;SPAN=9391;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:10:10:2.7:29.7,2.7,0:10:0:-29.71:29.71\n5\t169468974\t318970:2\tA\t]1:157699943]A\t28\tPASS\tEVDNC=ASSMB;HOMSEQ=A;MAPQ=60;MATEID=318970:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_5_169466501_169491501_22C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:15:8.9:28.7,0,8.9:10:0:-29.37:29.37\n5\t170833608\t321444:1\tG\t[5:178756116[G\t72\tPASS\tDISC_MAPQ=42;EVDNC=DSCRD;IMPRECISE;MAPQ=42;MATEID=321444:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:170833608(-)-5:178756116(-)__5_178752001_178777001D;SPAN=7922508;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:24:6:6.6:72.6,6.6,0:0:24:-72.62:72.62\n5\t172787216\t319739:1\tA\t]5:172787320]A\t68\tPASS\tEVDNC=ASSMB;HOMSEQ=AGAGACACACA;MAPQ=60;MATEID=319739:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_5_172774001_172799001_9C;SPAN=104;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:26:61:68.9:68.9,0,82.1:26:0:-68.68:68.78\n5\t172787320\t319739:2\tA\tA[5:172787216[\t68\tPASS\tEVDNC=ASSMB;HOMSEQ=AGAGACACACA;MAPQ=60;MATEID=319739:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_5_172774001_172799001_9C;SPAN=104;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:26:61:68.9:68.9,0,82.1:26:0:-68.68:68.78\n5\t173783944\t113403:1\tA\tA[7:44911156[\t30\tPASS\tDISC_MAPQ=255;EVDNC=TSI_L;HOMSEQ=AAAGAAA;MAPQ=60;MATEID=113403:2;MATENM=0;NM=0;NUMPARTS=3;REPSEQ=AAAGAAAGAAAG;SCTG=c_2_136293501_136318501_18C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:24:0:6.2:30.3,6.2,0:24:0:-30.37:30.37\n5\t176306387\t832137:1\tC\tC]18:57714588]\t82\tPASS\tDISC_MAPQ=8;EVDNC=ASDIS;HOMSEQ=C;MAPQ=60;MATEID=832137:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_18_57697501_57722501_10C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:27:10:7.5:82.5,7.5,0:27:7:-82.52:82.52\n5\t176306407\t832138:1\tA\t[18:57714342[A\t99\tPASS\tDISC_MAPQ=3;EVDNC=ASDIS;HOMSEQ=AG;MAPQ=60;MATEID=832138:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_18_57697501_57722501_6C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:42:15:11.7:128.7,11.7,0:25:23:-128.7:128.7\n5\t178095245\t321220:1\tC\tC[5:178096986[\t27\tPASS\tDISC_MAPQ=57;EVDNC=DSCRD;IMPRECISE;MAPQ=57;MATEID=321220:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:178095245(+)-5:178096986(-)__5_178090501_178115501D;SPAN=1741;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:44:27.2:27.2,0,83.3:0:12:-27.24:28.84\n5\t178096986\t321220:2\tT\t]5:178095245]T\t27\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=321220:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:178095245(+)-5:178096986(-)__5_178090501_178115501D;SPAN=1741;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:44:27.2:27.2,0,83.3:0:12:-27.24:28.84\n5\t178727280\t321428:1\tC\t[5:178866051[C\t22\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=321428:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:178727280(-)-5:178866051(-)__5_178703001_178728001D;SPAN=138771;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:13:9.5:22.7,0,9.5:0:8:-23.02:23.02\n5\t178756116\t321444:2\tT\t[5:170833608[T\t72\tPASS\tDISC_MAPQ=59;EVDNC=DSCRD;IMPRECISE;MAPQ=59;MATEID=321444:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:170833608(-)-5:178756116(-)__5_178752001_178777001D;SPAN=7922508;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:24:6:6.6:72.6,6.6,0:0:24:-72.62:72.62\n5\t178866051\t321428:2\tA\t[5:178727280[A\t22\tPASS\tDISC_MAPQ=49;EVDNC=DSCRD;IMPRECISE;MAPQ=49;MATEID=321428:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:178727280(-)-5:178866051(-)__5_178703001_178728001D;SPAN=138771;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:13:9.5:22.7,0,9.5:0:8:-23.02:23.02\n5\t179299294\t321578:1\tC\tC]9:112100475]\t42\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=GGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGC;MAPQ=60;MATEID=321578:2;MATENM=4;NM=9;NUMPARTS=2;SCTG=c_5_179291001_179316001_13C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:14:7:3.9:42.9,3.9,0:12:2:-42.91:42.91\n5\t180437137\t322042:1\tC\t]5:180437234]C\t72\tPASS\tEVDNC=ASSMB;HOMSEQ=CAGCCAATGGTCCAGCAGCACCAGCCCAGGGCAGCC;MAPQ=60;MATEID=322042:2;MATENM=2;NM=3;NUMPARTS=2;SCTG=c_5_180418001_180443001_13C;SPAN=97;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:26:49:49.1:72.2,0,49.1:26:0:-72.24:72.24\n5\t180437234\t322042:2\tC\tC[5:180437137[\t72\tPASS\tEVDNC=ASSMB;HOMSEQ=CAGCCAATGGTCCAGCAGCACCAGCCCAGGGCAGCC;MAPQ=60;MATEID=322042:1;MATENM=3;NM=2;NUMPARTS=2;SCTG=c_5_180418001_180443001_13C;SPAN=97;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:26:49:49.1:72.2,0,49.1:26:0:-72.24:72.24\n6\t150718\t322397:2\tT\tT[5:15864[\t99\tPASS\tDISC_MAPQ=5;EVDNC=TSI_L;HOMSEQ=CTT;MAPQ=60;MATEID=322397:1;MATENM=5;NM=6;NUMPARTS=3;REPSEQ=TTT;SCTG=c_6_147001_172001_17C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:39:30:10.8:118.8,10.8,0:32:13:-118.8:118.8\n6\t666488\t322633:1\tA\tA[6:667821[\t89\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=322633:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:666488(+)-6:667821(-)__6_661501_686501D;SPAN=1333;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:29:6:8.1:89.1,8.1,0:0:29:-89.12:89.12\n6\t667821\t322633:2\tT\t]6:666488]T\t89\tPASS\tDISC_MAPQ=54;EVDNC=DSCRD;IMPRECISE;MAPQ=54;MATEID=322633:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:666488(+)-6:667821(-)__6_661501_686501D;SPAN=1333;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:29:6:8.1:89.1,8.1,0:0:29:-89.12:89.12\n6\t773629\t322688:1\tT\tT[6:774803[\t99\tPASS\tEVDNC=ASSMB;HOMSEQ=CT;MAPQ=60;MATEID=322688:2;MATENM=2;NM=4;NUMPARTS=2;SCTG=c_6_759501_784501_14C;SPAN=1174;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:42:19:11.7:128.7,11.7,0:42:0:-128.7:128.7\n6\t774803\t322688:2\tC\t]6:773629]C\t99\tPASS\tEVDNC=ASSMB;HOMSEQ=CT;MAPQ=60;MATEID=322688:1;MATENM=4;NM=2;NUMPARTS=2;SCTG=c_6_759501_784501_14C;SPAN=1174;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:42:19:11.7:128.7,11.7,0:42:0:-128.7:128.7\n6\t857170\t322747:1\tC\tC[6:857563[\t79\tPASS\tEVDNC=ASSMB;HOMSEQ=C;MAPQ=60;MATEID=322747:2;MATENM=4;NM=8;NUMPARTS=2;SCTG=c_6_857501_882501_13C;SPAN=393;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:26:3:7.2:79.2,7.2,0:26:0:-79.22:79.22\n6\t857563\t322747:2\tC\t]6:857170]C\t79\tPASS\tEVDNC=ASSMB;HOMSEQ=C;MAPQ=60;MATEID=322747:1;MATENM=8;NM=4;NUMPARTS=2;SCTG=c_6_857501_882501_13C;SPAN=393;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:26:3:7.2:79.2,7.2,0:26:0:-79.22:79.22\n6\t994018\t322842:1\tT\t]6:994259]T\t53\tPASS\tEVDNC=ASSMB;HOMSEQ=TATGTATGTATGTATGTATGTATGTATGTAT;MAPQ=60;MATEID=322842:2;MATENM=6;NM=0;NUMPARTS=2;SCTG=c_6_980001_1005001_17C;SPAN=241;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:20:47:53:53,0,62.9:20:0:-52.81:52.88\n6\t994259\t322842:2\tT\tT[6:994018[\t53\tPASS\tEVDNC=ASSMB;HOMSEQ=TATGTATGTATGTATGTATGTATGTATGTAT;MAPQ=60;MATEID=322842:1;MATENM=0;NM=6;NUMPARTS=2;SCTG=c_6_980001_1005001_17C;SPAN=241;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:20:47:53:53,0,62.9:20:0:-52.81:52.88\n6\t1051554\t322871:1\tG\t]6:1051737]G\t57\tPASS\tEVDNC=ASSMB;INSERTION=AAT;MAPQ=60;MATEID=322871:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_1029001_1054001_3C;SPAN=183;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:23:67:57.2:57.2,0,110:23:0:-57.09:58.06\n6\t1051737\t322871:2\tT\tT[6:1051554[\t57\tPASS\tEVDNC=ASSMB;INSERTION=AAT;MAPQ=60;MATEID=322871:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_1029001_1054001_3C;SPAN=183;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:23:67:57.2:57.2,0,110:23:0:-57.09:58.06\n6\t3145215\t323598:1\tT\tT[6:3146275[\t35\tPASS\tDISC_MAPQ=59;EVDNC=ASDIS;HOMSEQ=GAGTGCTGGTTTGGGTCGAGTGCTGGTTCGGGTTGGAGTGCTGGTTCGGGTGGAGTGCTGATTCGGGGTGGAGTGCTGGT;MAPQ=60;MATEID=323598:2;MATENM=4;NM=4;NUMPARTS=2;SCTG=c_6_3136001_3161001_57C;SPAN=1060;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:15:2.3:35.3,0,2.3:2:12:-37.11:37.11\n6\t3146275\t323598:2\tG\t]6:3145215]G\t35\tPASS\tDISC_MAPQ=31;EVDNC=ASDIS;HOMSEQ=GAGTGCTGGTTTGGGTCGAGTGCTGGTTCGGGTTGGAGTGCTGGTTCGGGTGGAGTGCTGATTCGGGGTGGAGTGCTGGT;MAPQ=60;MATEID=323598:1;MATENM=4;NM=4;NUMPARTS=2;SCTG=c_6_3136001_3161001_57C;SPAN=1060;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:15:2.3:35.3,0,2.3:2:12:-37.11:37.11\n6\t3156553\t323610:1\tC\tC[6:3180181[\t22\tPASS\tDISC_MAPQ=40;EVDNC=DSCRD;IMPRECISE;MAPQ=40;MATEID=323610:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:3156553(+)-6:3180181(-)__6_3160501_3185501D;SPAN=23628;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:14:12.5:22.4,0,12.5:0:8:-22.62:22.62\n6\t3180181\t323610:2\tG\t]6:3156553]G\t22\tPASS\tDISC_MAPQ=58;EVDNC=DSCRD;IMPRECISE;MAPQ=58;MATEID=323610:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:3156553(+)-6:3180181(-)__6_3160501_3185501D;SPAN=23628;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:14:12.5:22.4,0,12.5:0:8:-22.62:22.62\n6\t4050023\t323982:1\tT\tT[6:4050327[\t60\tPASS\tEVDNC=ASSMB;HOMSEQ=GGAAACAGTTGTTTTT;MAPQ=60;MATEID=323982:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_4042501_4067501_93C;SPAN=304;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:21:31:14.6:60.8,0,14.6:21:0:-61.93:61.93\n6\t4050327\t323982:2\tG\t]6:4050023]G\t60\tPASS\tEVDNC=ASSMB;HOMSEQ=GGAAACAGTTGTTTTT;MAPQ=60;MATEID=323982:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_4042501_4067501_93C;SPAN=304;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:21:31:14.6:60.8,0,14.6:21:0:-61.93:61.93\n6\t5037015\t324390:1\tT\tT[6:5038953[\t82\tPASS\tEVDNC=ASSMB;INSERTION=AAAATCTGCTTC;MAPQ=60;MATEID=324390:2;MATENM=3;NM=2;NUMPARTS=2;SCTG=c_6_5022501_5047501_11C;SPAN=1938;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:27:16:7.5:82.5,7.5,0:27:0:-82.52:82.52\n6\t5038953\t324390:2\tA\t]6:5037015]A\t82\tPASS\tEVDNC=ASSMB;INSERTION=AAAATCTGCTTC;MAPQ=60;MATEID=324390:1;MATENM=2;NM=3;NUMPARTS=2;SCTG=c_6_5022501_5047501_11C;SPAN=1938;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:27:16:7.5:82.5,7.5,0:27:0:-82.52:82.52\n6\t5179525\t324454:1\tT\tT[6:5380194[\t21\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=324454:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:5179525(+)-6:5380194(-)__6_5169501_5194501D;SPAN=200669;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:17:18.5:21.8,0,18.5:0:8:-21.63:21.63\n6\t5380194\t324454:2\tG\t]6:5179525]G\t21\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=324454:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:5179525(+)-6:5380194(-)__6_5169501_5194501D;SPAN=200669;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:17:18.5:21.8,0,18.5:0:8:-21.63:21.63\n6\t5852479\t661746:1\tT\t[13:21325351[T\t26\tPASS\tDISC_MAPQ=36;EVDNC=DSCRD;IMPRECISE;MAPQ=36;MATEID=661746:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:5852479(-)-13:21325351(-)__13_21315001_21340001D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:9:8:2.4:26.4,2.4,0:0:9:-26.41:26.41\n6\t5853533\t661748:1\tA\tA]13:21325323]\t69\tPASS\tDISC_MAPQ=28;EVDNC=DSCRD;IMPRECISE;MAPQ=28;MATEID=661748:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:5853533(+)-13:21325323(+)__13_21315001_21340001D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:23:6:6.3:69.3,6.3,0:0:23:-69.32:69.32\n6\t5898216\t324659:1\tA\tA[6:5898643[\t63\tPASS\tEVDNC=ASSMB;HOMSEQ=CA;MAPQ=60;MATEID=324659:2;MATENM=1;NM=2;NUMPARTS=2;SCTG=c_6_5880001_5905001_75C;SPAN=427;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:22:33:17.3:63.5,0,17.3:22:0:-64.61:64.61\n6\t5898643\t324659:2\tC\t]6:5898216]C\t63\tPASS\tEVDNC=ASSMB;HOMSEQ=CA;MAPQ=60;MATEID=324659:1;MATENM=2;NM=1;NUMPARTS=2;SCTG=c_6_5880001_5905001_75C;SPAN=427;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:22:33:17.3:63.5,0,17.3:22:0:-64.61:64.61\n6\t6008564\t324826:1\tC\t]6:6149684]C\t30\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;MAPQ=60;MATEID=324826:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_6149501_6174501_31C;SPAN=141120;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:22:23.6:30.2,0,23.6:7:5:-30.15:30.15\n6\t6068616\t324764:1\tT\tT[6:6068946[\t0\tPASS\tEVDNC=ASSMB;HOMSEQ=CCCTCTTTTTCT;MAPQ=60;MATEID=324764:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_6051501_6076501_146C;SPAN=330;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/0:14:264:27.7:0,27.7,719.5:14:0:27.99:22.92\n6\t6068946\t324764:2\tC\t]6:6068616]C\t0\tPASS\tEVDNC=ASSMB;HOMSEQ=CCCTCTTTTTCT;MAPQ=60;MATEID=324764:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_6051501_6076501_146C;SPAN=330;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/0:14:264:27.7:0,27.7,719.5:14:0:27.99:22.92\n6\t6149684\t324826:2\tT\tT[6:6008564[\t30\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;MAPQ=60;MATEID=324826:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_6149501_6174501_31C;SPAN=141120;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:22:23.6:30.2,0,23.6:7:5:-30.15:30.15\n6\t8227706\t325594:1\tT\tT[6:8228009[\t40\tPASS\tEVDNC=ASSMB;HOMSEQ=TACTGTGAAGTTTTTT;MAPQ=60;MATEID=325594:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_8207501_8232501_120C;SPAN=303;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:22:13.7:40.1,0,13.7:14:0:-40.63:40.63\n6\t8228009\t325594:2\tT\t]6:8227706]T\t40\tPASS\tEVDNC=ASSMB;HOMSEQ=TACTGTGAAGTTTTTT;MAPQ=60;MATEID=325594:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_8207501_8232501_120C;SPAN=303;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:22:13.7:40.1,0,13.7:14:0:-40.63:40.63\n6\t9179635\t326114:1\tT\t]6:9180042]T\t31\tPASS\tEVDNC=ASSMB;HOMSEQ=TTCT;MAPQ=25;MATEID=326114:2;MATENM=1;NM=5;NUMPARTS=2;SCTG=c_6_9163001_9188001_16C;SPAN=407;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:42:31.1:31.1,0,74:13:0:-31.11:32.1\n6\t9180042\t326114:2\tT\tT[6:9179635[\t31\tPASS\tEVDNC=ASSMB;HOMSEQ=TTCT;MAPQ=60;MATEID=326114:1;MATENM=5;NM=1;NUMPARTS=2;SCTG=c_6_9163001_9188001_16C;SPAN=407;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:42:31.1:31.1,0,74:13:0:-31.11:32.1\n6\t9347213\t732153:1\tG\tG[15:55959268[\t10\tPASS\tEVDNC=ASSMB;HOMSEQ=TTAG;MAPQ=60;MATEID=732153:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_15_55958001_55983001_95C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:7:44:10.7:10.7,0,99.8:7:0:-10.74:14.97\n6\t9517473\t326244:1\tA\t]6:9517558]A\t50\tPASS\tEVDNC=ASSMB;INSERTION=TTATAT;MAPQ=60;MATEID=326244:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_6_9506001_9531001_35C;SPAN=85;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:23:89:50.9:50.9,0,173:23:0:-50.91:54.64\n6\t9517558\t326244:2\tA\tA[6:9517473[\t50\tPASS\tEVDNC=ASSMB;INSERTION=TTATAT;MAPQ=60;MATEID=326244:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_6_9506001_9531001_35C;SPAN=85;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:23:89:50.9:50.9,0,173:23:0:-50.91:54.64\n6\t13128170\t988636:1\tC\tC]Un_KN707756v1_decoy:4877]\t33\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=988636:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_607_1_4877_2C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:11:3:3:33,3,0:11:0:-33.01:33.01\n6\t13128174\t327574:1\tC\t]9:21841795]C\t49\tPASS\tDISC_MAPQ=60;EVDNC=TSI_L;HOMSEQ=ATCACATCACAGGACTCTTTGCAGACATCCCCCAGCATCAGCTCAGACAGAGCCTGTTGCCCTGCTGAGTGGCTAGACCCAGAAGAGCAATAACAGTCACTGCAGTCCAGGTCTCAAGAAGCCCCATCCCTAGGGGAAGGGGGAGAGCACAACATCAAGGGGTCACCCCTTGGGACAAGAAAATCTGAACAGCAGCCCTTGAGTTTCAAACTTCTC;INSERTION=ACTTCTC;MAPQ=60;MATEID=327574:2;MATENM=8;NM=0;NUMPARTS=4;REPSEQ=CTCT;SCTG=c_6_13107501_13132501_88C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:17:16:4.5:49.5,4.5,0:13:6:-49.51:49.51\n6\t13128174\t988637:1\tC\t[Un_KN707756v1_decoy:1[C\t36\tPASS\tDISC_MAPQ=255;EVDNC=TSI_L;MAPQ=60;MATEID=988637:2;MATENM=0;NM=0;NUMPARTS=5;SCTG=c_607_1_4877_0C;SPAN=-1;SUBN=1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:12:4:3.3:36.3,3.3,0:12:0:-36.31:36.31\n6\t13191316\t812584:1\tA\tA[17:66641155[\t40\tPASS\tDISC_MAPQ=59;EVDNC=DSCRD;IMPRECISE;MAPQ=59;MATEID=812584:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:13191316(+)-17:66641155(-)__17_66640001_66665001D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:15:34:40.1:40.1,0,43.4:0:15:-39.96:39.98\n6\t13434242\t327696:1\tC\t]6:13434601]C\t27\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=CACAGAAGTCAAGTGCAGGGCCTTATGGGAACACAGAAGTCAAGTGCAGGGC;MAPQ=60;MATEID=327696:2;MATENM=3;NM=0;NUMPARTS=2;SCTG=c_6_13426001_13451001_3C;SPAN=359;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:56:27.2:27.2,0,113:11:2:-27.17:30.18\n6\t13434601\t327696:2\tC\tC[6:13434242[\t27\tPASS\tDISC_MAPQ=37;EVDNC=ASDIS;HOMSEQ=CACAGAAGTCAAGTGCAGGGCCTTATGGGAACACAGAAGTCAAGTGCAGGGC;MAPQ=60;MATEID=327696:1;MATENM=0;NM=3;NUMPARTS=2;SCTG=c_6_13426001_13451001_3C;SPAN=359;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:56:27.2:27.2,0,113:11:2:-27.17:30.18\n6\t17099662\t328908:1\tA\t]6:17320764]A\t48\tPASS\tEVDNC=ASSMB;HOMSEQ=A;MAPQ=60;MATEID=328908:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_6_17076501_17101501_22C;SPAN=221102;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:17:26:15.8:48.8,0,15.8:17:0:-49.68:49.68\n6\t17320764\t328908:2\tA\tA[6:17099662[\t48\tPASS\tEVDNC=ASSMB;HOMSEQ=A;MAPQ=60;MATEID=328908:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_6_17076501_17101501_22C;SPAN=221102;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:17:26:15.8:48.8,0,15.8:17:0:-49.68:49.68\n6\t18401859\t329492:1\tC\tC[6:18402637[\t92\tPASS\tEVDNC=ASSMB;HOMSEQ=CCC;MAPQ=60;MATEID=329492:2;MATENM=3;NM=0;NUMPARTS=2;SCTG=c_6_18399501_18424501_13C;SPAN=778;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:31:14:8.4:92.4,8.4,0:31:0:-92.42:92.42\n6\t18402637\t329492:2\tC\t]6:18401859]C\t92\tPASS\tEVDNC=ASSMB;HOMSEQ=CCC;MAPQ=60;MATEID=329492:1;MATENM=0;NM=3;NUMPARTS=2;SCTG=c_6_18399501_18424501_13C;SPAN=778;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:31:14:8.4:92.4,8.4,0:31:0:-92.42:92.42\n6\t19423383\t329861:1\tT\tT[6:19423606[\t56\tPASS\tEVDNC=ASSMB;HOMSEQ=TGCATTGCCTTT;MAPQ=60;MATEID=329861:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_19404001_19429001_69C;SPAN=223;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:19:23:0.2:56.3,0,0.2:19:0:-59.38:59.38\n6\t19423606\t329861:2\tT\t]6:19423383]T\t56\tPASS\tEVDNC=ASSMB;HOMSEQ=TGCATTGCCTTT;MAPQ=60;MATEID=329861:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_19404001_19429001_69C;SPAN=223;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:19:23:0.2:56.3,0,0.2:19:0:-59.38:59.38\n6\t19764886\t330018:1\tA\t[14:76216190[A\t92\tPASS\tDISC_MAPQ=4;EVDNC=ASDIS;INSERTION=G;MAPQ=19;MATEID=330018:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_19747001_19772001_3C;SPAN=-1;SUBN=2;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:31:14:8.4:92.4,8.4,0:28:15:-92.42:92.42\n6\t19764894\t330019:1\tG\tG[6:19770954[\t0\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AGAAAAAAAAACTAACTGG;MAPQ=60;MATEID=330019:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_6_19747001_19772001_11C;SPAN=6060;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/0:30:887:99:0,150,2535:13:22:150.3:43.18\n6\t19770954\t330019:2\tA\t]6:19764894]A\t0\tPASS\tDISC_MAPQ=53;EVDNC=ASDIS;HOMSEQ=AGAAAAAAAAACTAACTGG;MAPQ=60;MATEID=330019:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_6_19747001_19772001_11C;SPAN=6060;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/0:30:887:99:0,150,2535:13:22:150.3:43.18\n6\t20765147\t330418:1\tT\tT[6:20765456[\t74\tPASS\tEVDNC=ASSMB;HOMSEQ=GGTTACATTCTT;MAPQ=60;MATEID=330418:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_20751501_20776501_118C;SPAN=309;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:25:30:1.4:74,0,1.4:25:0:-78.37:78.37\n6\t20765456\t330418:2\tG\t]6:20765147]G\t74\tPASS\tEVDNC=ASSMB;HOMSEQ=GGTTACATTCTT;MAPQ=60;MATEID=330418:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_20751501_20776501_118C;SPAN=309;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:25:30:1.4:74,0,1.4:25:0:-78.37:78.37\n6\t21205807\t330582:1\tA\tA[6:21206084[\t82\tPASS\tDISC_MAPQ=57;EVDNC=ASDIS;HOMSEQ=GCCTCCCAAAGTGCTGGGATTACA;MAPQ=60;MATEID=330582:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_21192501_21217501_51C;SPAN=277;SUBN=1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:27:23:7.5:82.5,7.5,0:22:8:-82.52:82.52\n6\t21206084\t330582:2\tG\t]6:21205807]G\t82\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=GCCTCCCAAAGTGCTGGGATTACA;MAPQ=60;MATEID=330582:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_21192501_21217501_51C;SPAN=277;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:27:23:7.5:82.5,7.5,0:22:8:-82.52:82.52\n6\t21456465\t330678:2\tA\tA[4:183247605[\t23\tPASS\tDISC_MAPQ=57;EVDNC=ASDIS;HOMSEQ=CTATATATACTATATATA;MAPQ=60;MATEID=330678:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_21437501_21462501_22C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:11:3.5:23.3,0,3.5:7:3:-24.05:24.05\n6\t22052541\t330896:1\tC\tC[6:22053499[\t79\tPASS\tEVDNC=ASSMB;HOMSEQ=C;MAPQ=60;MATEID=330896:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_22050001_22075001_4C;SPAN=958;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:26:30:1.8:79.2,1.8,0:26:0:-82.68:82.68\n6\t22053499\t330896:2\tC\t]6:22052541]C\t79\tPASS\tEVDNC=ASSMB;HOMSEQ=C;MAPQ=60;MATEID=330896:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_22050001_22075001_4C;SPAN=958;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:26:30:1.8:79.2,1.8,0:26:0:-82.68:82.68\n6\t22782439\t331166:1\tT\tT[6:22782745[\t82\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=CCAAGTTTGGCAATTATTT;MAPQ=60;MATEID=331166:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_22760501_22785501_46C;SPAN=306;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:26:29:4.8:82.5,4.8,0:17:10:-83.85:83.85\n6\t22782745\t331166:2\tC\t]6:22782439]C\t82\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=CCAAGTTTGGCAATTATTT;MAPQ=60;MATEID=331166:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_22760501_22785501_46C;SPAN=306;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:26:29:4.8:82.5,4.8,0:17:10:-83.85:83.85\n6\t22832898\t331189:1\tA\tA[6:22833431[\t8\tPASS\tEVDNC=ASSMB;INSERTION=CGCTCTAA;MAPQ=60;MATEID=331189:2;MATENM=1;NM=2;NUMPARTS=2;SCTG=c_6_22809501_22834501_21C;SPAN=533;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:6:39:8.9:8.9,0,88.1:6:0:-8.844:12.73\n6\t22833431\t331189:2\tC\t]6:22832898]C\t8\tPASS\tEVDNC=ASSMB;INSERTION=CGCTCTAA;MAPQ=60;MATEID=331189:1;MATENM=2;NM=1;NUMPARTS=2;SCTG=c_6_22809501_22834501_21C;SPAN=533;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:6:39:8.9:8.9,0,88.1:6:0:-8.844:12.73\n6\t23734339\t331626:1\tT\t]6:23758485]T\t29\tPASS\tDISC_MAPQ=34;EVDNC=DSCRD;IMPRECISE;MAPQ=34;MATEID=331626:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:23734339(-)-6:23758485(+)__6_23716001_23741001D;SPAN=24146;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:9:10:2.7:29.7,2.7,0:0:9:-29.08:29.08\n6\t23743031\t331638:1\tT\tT[6:23745718[\t62\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=331638:2;MATENM=5;NM=0;NUMPARTS=2;SCTG=c_6_23740501_23765501_45C;SPAN=2687;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:22:36:26.3:62.6,0,26.3:22:0:-63.21:63.21\n6\t23745718\t331638:2\tG\t]6:23743031]G\t62\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=331638:1;MATENM=0;NM=5;NUMPARTS=2;SCTG=c_6_23740501_23765501_45C;SPAN=2687;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:22:36:26.3:62.6,0,26.3:22:0:-63.21:63.21\n6\t23758485\t331626:2\tC\tC[6:23734339[\t29\tPASS\tDISC_MAPQ=15;EVDNC=DSCRD;IMPRECISE;MAPQ=15;MATEID=331626:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:23734339(-)-6:23758485(+)__6_23716001_23741001D;SPAN=24146;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:9:10:2.7:29.7,2.7,0:0:9:-29.08:29.08\n6\t24811736\t332224:1\tA\tA[6:24817721[\t79\tPASS\tDISC_MAPQ=54;EVDNC=DSCRD;IMPRECISE;MAPQ=54;MATEID=332224:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:24811736(+)-6:24817721(-)__6_24794001_24819001D;SPAN=5985;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:26:5:7.2:79.2,7.2,0:0:26:-79.22:79.22\n6\t24817721\t332224:2\tT\t]6:24811736]T\t79\tPASS\tDISC_MAPQ=57;EVDNC=DSCRD;IMPRECISE;MAPQ=57;MATEID=332224:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:24811736(+)-6:24817721(-)__6_24794001_24819001D;SPAN=5985;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:26:5:7.2:79.2,7.2,0:0:26:-79.22:79.22\n6\t26518278\t332830:1\tA\tA[6:26518585[\t4\tPASS\tEVDNC=ASSMB;HOMSEQ=GTGATCCACCCGCCTCGGCCTCCCAAA;MAPQ=60;MATEID=332830:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_6_26509001_26534001_11C;SPAN=307;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:4:30:4.7:4.7,0,70.7:4:0:-4.771:8.22\n6\t26518585\t332830:2\tG\t]6:26518278]G\t4\tPASS\tEVDNC=ASSMB;HOMSEQ=GTGATCCACCCGCCTCGGCCTCCCAAA;MAPQ=60;MATEID=332830:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_6_26509001_26534001_11C;SPAN=307;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:4:30:4.7:4.7,0,70.7:4:0:-4.771:8.22\n6\t29717817\t333640:1\tT\tT[6:29720303[\t0\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=333640:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:29717817(+)-6:29720303(-)__6_29718501_29743501D;SPAN=2486;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/0:35:473:17.1:0,17.1,1225:0:35:17.42:62.5\n6\t29720303\t333640:2\tA\t]6:29717817]A\t0\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=333640:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:29717817(+)-6:29720303(-)__6_29718501_29743501D;SPAN=2486;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/0:35:473:17.1:0,17.1,1225:0:35:17.42:62.5\n6\t29932114\t333714:1\tG\tG[6:29933749[\t99\tPASS\tDISC_MAPQ=48;EVDNC=DSCRD;IMPRECISE;MAPQ=48;MATEID=333714:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:29932114(+)-6:29933749(-)__6_29914501_29939501D;SPAN=1635;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:41:7:11.4:125.4,11.4,0:0:41:-125.4:125.4\n6\t29933749\t333714:2\tA\t]6:29932114]A\t99\tPASS\tDISC_MAPQ=56;EVDNC=DSCRD;IMPRECISE;MAPQ=56;MATEID=333714:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:29932114(+)-6:29933749(-)__6_29914501_29939501D;SPAN=1635;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:41:7:11.4:125.4,11.4,0:0:41:-125.4:125.4\n6\t31225585\t334297:1\tA\tA[6:31226615[\t26\tPASS\tDISC_MAPQ=53;EVDNC=DSCRD;IMPRECISE;MAPQ=53;MATEID=334297:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:31225585(+)-6:31226615(-)__6_31213001_31238001D;SPAN=1030;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:13:6.2:26,0,6.2:0:9:-26.69:26.69\n6\t31226615\t334297:2\tT\t]6:31225585]T\t26\tPASS\tDISC_MAPQ=28;EVDNC=DSCRD;IMPRECISE;MAPQ=28;MATEID=334297:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:31225585(+)-6:31226615(-)__6_31213001_31238001D;SPAN=1030;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:13:6.2:26,0,6.2:0:9:-26.69:26.69\n6\t31243972\t334323:1\tC\tC[6:31245339[\t99\tPASS\tDISC_MAPQ=58;EVDNC=DSCRD;IMPRECISE;MAPQ=58;MATEID=334323:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:31243972(+)-6:31245339(-)__6_31237501_31262501D;SPAN=1367;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:45:23:12.6:138.6,12.6,0:0:45:-138.6:138.6\n6\t31245339\t334323:2\tA\t]6:31243972]A\t99\tPASS\tDISC_MAPQ=54;EVDNC=DSCRD;IMPRECISE;MAPQ=54;MATEID=334323:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:31243972(+)-6:31245339(-)__6_31237501_31262501D;SPAN=1367;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:45:23:12.6:138.6,12.6,0:0:45:-138.6:138.6\n6\t31453847\t334588:1\tA\tA[6:31456609[\t54\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=334588:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:31453847(+)-6:31456609(-)__6_31433501_31458501D;SPAN=2762;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:19:29:18.2:54.5,0,18.2:0:19:-55.55:55.55\n6\t31456609\t334588:2\tC\t]6:31453847]C\t54\tPASS\tDISC_MAPQ=47;EVDNC=DSCRD;IMPRECISE;MAPQ=47;MATEID=334588:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:31453847(+)-6:31456609(-)__6_31433501_31458501D;SPAN=2762;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:19:29:18.2:54.5,0,18.2:0:19:-55.55:55.55\n6\t31703416\t334708:1\tG\tG[6:31706584[\t24\tPASS\tEVDNC=ASSMB;INSERTION=ACATTTTC;MAPQ=60;MATEID=334708:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_31703001_31728001_0C;SPAN=3168;SUBN=8;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:31:24.5:24.5,0,50.9:10:0:-24.3:24.91\n6\t31706584\t334708:2\tA\t]6:31703416]A\t24\tPASS\tEVDNC=ASSMB;INSERTION=ACATTTTC;MAPQ=60;MATEID=334708:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_31703001_31728001_0C;SPAN=3168;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:31:24.5:24.5,0,50.9:10:0:-24.3:24.91\n6\t32320801\t585625:1\tA\tA[11:40904857[\t39\tPASS\tEVDNC=ASSMB;INSERTION=G;MAPQ=60;MATEID=585625:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_40890501_40915501_5C;SPAN=-1;SUBN=4;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:12:13:3.6:39.6,3.6,0:12:0:-39.28:39.28\n6\t32594296\t335097:1\tA\tA[6:32596831[\t28\tPASS\tDISC_MAPQ=58;EVDNC=DSCRD;IMPRECISE;MAPQ=58;MATEID=335097:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:32594296(+)-6:32596831(-)__6_32585001_32610001D;SPAN=2535;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:17:11.9:28.4,0,11.9:0:10:-28.47:28.47\n6\t32596831\t335097:2\tT\t]6:32594296]T\t28\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=335097:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:32594296(+)-6:32596831(-)__6_32585001_32610001D;SPAN=2535;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:17:11.9:28.4,0,11.9:0:10:-28.47:28.47\n6\t33062526\t4064:2\tC\t]1:13299454]C\t46\tPASS\tDISC_MAPQ=60;EVDNC=TSI_L;MAPQ=60;MATEID=4064:1;MATENM=1;NM=11;NUMPARTS=3;REPSEQ=GG;SCTG=c_1_13279001_13304001_4C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:16:12:4.2:46.2,4.2,0:13:5:-46.21:46.21\n6\t33615534\t335682:1\tC\tC[6:33618067[\t62\tPASS\tDISC_MAPQ=58;EVDNC=DSCRD;IMPRECISE;MAPQ=58;MATEID=335682:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:33615534(+)-6:33618067(-)__6_33614001_33639001D;SPAN=2533;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:21:13:5.7:62.7,5.7,0:0:21:-62.72:62.72\n6\t33618067\t335682:2\tC\t]6:33615534]C\t62\tPASS\tDISC_MAPQ=57;EVDNC=DSCRD;IMPRECISE;MAPQ=57;MATEID=335682:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:33615534(+)-6:33618067(-)__6_33614001_33639001D;SPAN=2533;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:21:13:5.7:62.7,5.7,0:0:21:-62.72:62.72\n6\t33970052\t335774:1\tA\tA[6:33974921[\t25\tPASS\tEVDNC=ASSMB;INSERTION=GCTTTTAT;MAPQ=60;MATEID=335774:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_33957001_33982001_67C;SPAN=4869;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:28:25.1:25.1,0,44.9:10:0:-25.14:25.46\n6\t33974921\t335774:2\tA\t]6:33970052]A\t25\tPASS\tEVDNC=ASSMB;INSERTION=GCTTTTAT;MAPQ=60;MATEID=335774:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_33957001_33982001_67C;SPAN=4869;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:28:25.1:25.1,0,44.9:10:0:-25.14:25.46\n6\t34072502\t335835:1\tA\t]6:34073328]A\t45\tPASS\tDISC_MAPQ=41;EVDNC=DSCRD;IMPRECISE;MAPQ=41;MATEID=335835:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:34072502(-)-6:34073328(+)__6_34055001_34080001D;SPAN=826;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:18:51:45.2:45.2,0,81.5:0:18:-45.08:45.71\n6\t34073328\t335835:2\tC\tC[6:34072502[\t45\tPASS\tDISC_MAPQ=44;EVDNC=DSCRD;IMPRECISE;MAPQ=44;MATEID=335835:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:34072502(-)-6:34073328(+)__6_34055001_34080001D;SPAN=826;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:18:51:45.2:45.2,0,81.5:0:18:-45.08:45.71\n6\t34375168\t336028:1\tC\t]6:34536382]C\t42\tPASS\tDISC_MAPQ=53;EVDNC=ASDIS;HOMSEQ=C;MAPQ=5;MATEID=336028:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_34520501_34545501_48C;SPAN=161214;SUBN=4;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:14:14:3.9:42.9,3.9,0:8:8:-42.91:42.91\n6\t34536382\t336028:2\tC\tC[6:34375168[\t42\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=C;MAPQ=60;MATEID=336028:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_34520501_34545501_48C;SPAN=161214;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:14:14:3.9:42.9,3.9,0:8:8:-42.91:42.91\n6\t34829944\t336095:1\tA\t]6:34915313]A\t32\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=336095:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:34829944(-)-6:34915313(+)__6_34912501_34937501D;SPAN=85369;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:16:5.6:32,0,5.6:0:11:-32.57:32.57\n6\t34915313\t336095:2\tC\tC[6:34829944[\t32\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=336095:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:34829944(-)-6:34915313(+)__6_34912501_34937501D;SPAN=85369;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:16:5.6:32,0,5.6:0:11:-32.57:32.57\n6\t35658747\t336247:1\tT\tT[6:35661967[\t99\tPASS\tDISC_MAPQ=58;EVDNC=DSCRD;IMPRECISE;MAPQ=58;MATEID=336247:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:35658747(+)-6:35661967(-)__6_35647501_35672501D;SPAN=3220;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:35:10:9.6:105.6,9.6,0:0:35:-105.6:105.6\n6\t35661967\t336247:2\tG\t]6:35658747]G\t99\tPASS\tDISC_MAPQ=59;EVDNC=DSCRD;IMPRECISE;MAPQ=59;MATEID=336247:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:35658747(+)-6:35661967(-)__6_35647501_35672501D;SPAN=3220;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:35:10:9.6:105.6,9.6,0:0:35:-105.6:105.6\n6\t35915816\t255192:2\tC\tC]4:133589882]\t22\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=255192:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=4:133589882(+)-6:35915816(+)__4_133574001_133599001D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:15:15.5:22.1,0,15.5:0:8:-22.25:22.25\n6\t39096799\t337395:1\tA\tA[6:39097098[\t69\tPASS\tEVDNC=ASSMB;INSERTION=TTGTTGTTG;MAPQ=60;MATEID=337395:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_39077501_39102501_40C;SPAN=299;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:23:22:6.3:69.3,6.3,0:23:0:-69.32:69.32\n6\t39097098\t337395:2\tA\t]6:39096799]A\t69\tPASS\tEVDNC=ASSMB;INSERTION=TTGTTGTTG;MAPQ=60;MATEID=337395:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_39077501_39102501_40C;SPAN=299;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:23:22:6.3:69.3,6.3,0:23:0:-69.32:69.32\n6\t41219155\t337856:1\tT\t]6:41219297]T\t61\tPASS\tEVDNC=ASSMB;HOMSEQ=TGCGTATATACGAAATGTACATATATGTGCGTATATA;MAPQ=60;MATEID=337856:2;MATENM=5;NM=3;NUMPARTS=2;SCTG=c_6_41209001_41234001_28C;SPAN=142;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:27:99:61.4:61.4,0,186.8:27:0:-61.3:64.89\n6\t41219297\t337856:2\tA\tA[6:41219155[\t61\tPASS\tEVDNC=ASSMB;HOMSEQ=TGCGTATATACGAAATGTACATATATGTGCGTATATA;MAPQ=60;MATEID=337856:1;MATENM=3;NM=5;NUMPARTS=2;SCTG=c_6_41209001_41234001_28C;SPAN=142;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:27:99:61.4:61.4,0,186.8:27:0:-61.3:64.89\n6\t41436338\t337911:1\tT\tT[6:41436646[\t40\tPASS\tEVDNC=ASSMB;HOMSEQ=TATGCTTGAAATTTCT;MAPQ=60;MATEID=337911:2;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_6_41429501_41454501_18C;SPAN=308;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:20:7.7:40.7,0,7.7:14:0:-41.65:41.65\n6\t41436646\t337911:2\tT\t]6:41436338]T\t40\tPASS\tEVDNC=ASSMB;HOMSEQ=TATGCTTGAAATTTCT;MAPQ=60;MATEID=337911:1;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_6_41429501_41454501_18C;SPAN=308;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:20:7.7:40.7,0,7.7:14:0:-41.65:41.65\n6\t41897072\t338045:1\tT\tT[6:41897594[\t52\tPASS\tDISC_MAPQ=58;EVDNC=ASDIS;HOMSEQ=CCTGTAATCCCAGCTACTCGGGAAGCTGAGGCAGGAGAAT;MAPQ=60;MATEID=338045:2;MATENM=1;NM=2;NUMPARTS=2;SCTG=c_6_41895001_41920001_15C;SPAN=522;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:18:11:4.8:52.8,4.8,0:12:11:-52.81:52.81\n6\t41897594\t338045:2\tC\t]6:41897072]C\t52\tPASS\tDISC_MAPQ=56;EVDNC=ASDIS;HOMSEQ=CCTGTAATCCCAGCTACTCGGGAAGCTGAGGCAGGAGAAT;MAPQ=60;MATEID=338045:1;MATENM=2;NM=1;NUMPARTS=2;SCTG=c_6_41895001_41920001_15C;SPAN=522;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:18:11:4.8:52.8,4.8,0:12:11:-52.81:52.81\n6\t44044615\t338787:1\tT\t]6:44045375]T\t31\tPASS\tDISC_MAPQ=19;EVDNC=DSCRD;IMPRECISE;MAPQ=19;MATEID=338787:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:44044615(-)-6:44045375(+)__6_44026501_44051501D;SPAN=760;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:21:137:31.1:31.1,0,311.6:0:21:-30.81:44.53\n6\t44045375\t338787:2\tA\tA[6:44044615[\t31\tPASS\tDISC_MAPQ=28;EVDNC=DSCRD;IMPRECISE;MAPQ=28;MATEID=338787:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:44044615(-)-6:44045375(+)__6_44026501_44051501D;SPAN=760;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:21:137:31.1:31.1,0,311.6:0:21:-30.81:44.53\n6\t47167028\t339768:1\tT\tT[6:47167380[\t20\tPASS\tEVDNC=ASSMB;INSERTION=TTTA;MAPQ=60;MATEID=339768:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_47162501_47187501_44C;SPAN=352;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:21:20.6:20.6,0,30.5:8:0:-20.51:20.65\n6\t47167380\t339768:2\tT\t]6:47167028]T\t20\tPASS\tEVDNC=ASSMB;INSERTION=TTTA;MAPQ=60;MATEID=339768:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_47162501_47187501_44C;SPAN=352;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:21:20.6:20.6,0,30.5:8:0:-20.51:20.65\n6\t48963309\t340391:1\tC\tC[6:48970897[\t31\tPASS\tEVDNC=ASSMB;HOMSEQ=C;MAPQ=60;MATEID=340391:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_6_48951001_48976001_80C;SPAN=7588;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:29:31.4:31.4,0,41.3:12:0:-31.46:31.54\n6\t48970897\t340391:2\tC\t]6:48963309]C\t31\tPASS\tEVDNC=ASSMB;HOMSEQ=C;MAPQ=60;MATEID=340391:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_6_48951001_48976001_80C;SPAN=7588;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:29:31.4:31.4,0,41.3:12:0:-31.46:31.54\n6\t51133723\t341121:1\tT\t[6:51227147[T\t52\tPASS\tDISC_MAPQ=58;EVDNC=ASDIS;HOMSEQ=TTTGATTGCACT;MAPQ=60;MATEID=341121:2;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_6_51205001_51230001_33C;SPAN=93424;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:18:18:4.8:52.8,4.8,0:12:7:-52.81:52.81\n6\t51227147\t341121:2\tA\t[6:51133723[A\t52\tPASS\tDISC_MAPQ=47;EVDNC=ASDIS;HOMSEQ=TTTGATTGCACT;MAPQ=32;MATEID=341121:1;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_6_51205001_51230001_33C;SPAN=93424;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:18:18:4.8:52.8,4.8,0:12:7:-52.81:52.81\n6\t51379339\t289697:2\tG\tG[5:43063268[\t23\tPASS\tDISC_MAPQ=0;EVDNC=TSI_L;HOMSEQ=AAAGAAAG;INSERTION=GAA;MAPQ=60;MATEID=289697:1;MATENM=6;NM=0;NUMPARTS=3;REPSEQ=AAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGG;SCTG=c_5_43046501_43071501_75C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:19:8:4.8:23.4,4.8,0:8:11:-23.48:23.48\n6\t51391502\t341184:1\tC\tC[6:51391805[\t32\tPASS\tEVDNC=ASSMB;HOMSEQ=AAAATTAAGGTGTC;MAPQ=60;MATEID=341184:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_6_51376501_51401501_45C;SPAN=303;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:15:5.6:32,0,5.6:11:0:-33.15:33.15\n6\t51391805\t341184:2\tA\t]6:51391502]A\t32\tPASS\tEVDNC=ASSMB;HOMSEQ=AAAATTAAGGTGTC;MAPQ=60;MATEID=341184:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_6_51376501_51401501_45C;SPAN=303;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:15:5.6:32,0,5.6:11:0:-33.15:33.15\n6\t51652566\t341267:1\tT\tT[6:51652878[\t30\tPASS\tEVDNC=ASSMB;HOMSEQ=TATCTCTCTTGTTTT;MAPQ=60;MATEID=341267:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_51646001_51671001_28C;SPAN=312;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:44:30.5:30.5,0,80:13:0:-30.55:31.78\n6\t51652878\t341267:2\tT\t]6:51652566]T\t30\tPASS\tEVDNC=ASSMB;HOMSEQ=TATCTCTCTTGTTTT;MAPQ=60;MATEID=341267:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_51646001_51671001_28C;SPAN=312;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:44:30.5:30.5,0,80:13:0:-30.55:31.78\n6\t52786107\t341621:1\tC\t]6:52826679]C\t39\tPASS\tDISC_MAPQ=49;EVDNC=DSCRD;IMPRECISE;MAPQ=49;MATEID=341621:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:52786107(-)-6:52826679(+)__6_52822001_52847001D;SPAN=40572;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:13:5:3.6:39.6,3.6,0:0:13:-39.61:39.61\n6\t52786421\t341602:1\tA\tA[6:52787846[\t39\tPASS\tDISC_MAPQ=42;EVDNC=DSCRD;IMPRECISE;MAPQ=42;MATEID=341602:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:52786421(+)-6:52787846(-)__6_52773001_52798001D;SPAN=1425;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:15:35:39.8:39.8,0,46.4:0:15:-39.68:39.73\n6\t52787846\t341602:2\tA\t]6:52786421]A\t39\tPASS\tDISC_MAPQ=32;EVDNC=DSCRD;IMPRECISE;MAPQ=32;MATEID=341602:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:52786421(+)-6:52787846(-)__6_52773001_52798001D;SPAN=1425;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:15:35:39.8:39.8,0,46.4:0:15:-39.68:39.73\n6\t52787876\t341603:1\tA\t]6:52826658]A\t99\tPASS\tDISC_MAPQ=32;EVDNC=TSI_L;INSERTION=CAGTTGTATGTCCCTTTTACCAGTCATTGGGAATTCCCAAGTCTGTGATCTTGCCAAACGTAAATTCGCAATAATTGTGTGTTGATTACTTGTCTAGAGAACGTAACTTTAGCATAAACACCTACCTTTCCTCTGGCAATGATCATATTCTTAGATTAAGTAAAATGACATCATGACTATTATTTCCCCTCATGAC;MAPQ=46;MATEID=341603:2;MATENM=1;NM=8;NUMPARTS=3;REPSEQ=TT;SCTG=c_6_52773001_52798001_77C;SPAN=38782;SUBN=7;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:41:22:11.4:125.4,11.4,0:38:4:-125.4:125.4\n6\t52826658\t341603:2\tC\tC[6:52787876[\t99\tPASS\tDISC_MAPQ=46;EVDNC=TSI_L;INSERTION=CAGTTGTATGTCCCTTTTACCAGTCATTGGGAATTCCCAAGTCTGTGATCTTGCCAAACGTAAATTCGCAATAATTGTGTGTTGATTACTTGTCTAGAGAACGTAACTTTAGCATAAACACCTACCTTTCCTCTGGCAATGATCATATTCTTAGATTAAGTAAAATGACATCATGACTATTATTTCCCCTCATGAC;MAPQ=60;MATEID=341603:1;MATENM=8;NM=1;NUMPARTS=3;REPSEQ=TT;SCTG=c_6_52773001_52798001_77C;SPAN=38782;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:41:22:11.4:125.4,11.4,0:38:4:-125.4:125.4\n6\t52826679\t341621:2\tA\tA[6:52786107[\t39\tPASS\tDISC_MAPQ=59;EVDNC=DSCRD;IMPRECISE;MAPQ=59;MATEID=341621:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:52786107(-)-6:52826679(+)__6_52822001_52847001D;SPAN=40572;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:13:5:3.6:39.6,3.6,0:0:13:-39.61:39.61\n6\t53345529\t341823:1\tT\t]6:53345659]T\t59\tPASS\tEVDNC=ASSMB;INSERTION=ATTCA;MAPQ=60;MATEID=341823:2;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_6_53336501_53361501_10C;SPAN=130;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:22:48:59.3:59.3,0,59.3:22:0:-59.13:59.13\n6\t53345659\t341823:2\tA\tA[6:53345529[\t59\tPASS\tEVDNC=ASSMB;INSERTION=ATTCA;MAPQ=60;MATEID=341823:1;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_6_53336501_53361501_10C;SPAN=130;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:22:48:59.3:59.3,0,59.3:22:0:-59.13:59.13\n6\t54059860\t342044:1\tT\t]6:54063911]T\t41\tPASS\tEVDNC=ASSMB;INSERTION=AG;MAPQ=60;MATEID=342044:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_6_54047001_54072001_38C;SPAN=4051;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:15:29:31.4:41.3,0,31.4:15:0:-41.43:41.43\n6\t54060007\t342045:1\tT\tT[6:54070031[\t64\tPASS\tEVDNC=ASSMB;HOMSEQ=GT;MAPQ=60;MATEID=342045:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_6_54047001_54072001_5C;SPAN=10024;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:23:42:41:64.1,0,41:23:0:-64.37:64.37\n6\t54063911\t342044:2\tT\tT[6:54059860[\t41\tPASS\tEVDNC=ASSMB;INSERTION=AG;MAPQ=60;MATEID=342044:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_6_54047001_54072001_38C;SPAN=4051;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:15:29:31.4:41.3,0,31.4:15:0:-41.43:41.43\n6\t54070031\t342045:2\tG\t]6:54060007]G\t64\tPASS\tEVDNC=ASSMB;HOMSEQ=GT;MAPQ=60;MATEID=342045:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_6_54047001_54072001_5C;SPAN=10024;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:23:42:41:64.1,0,41:23:0:-64.37:64.37\n6\t54691651\t342258:1\tA\tA[6:54691973[\t92\tPASS\tEVDNC=ASSMB;HOMSEQ=AAAAGAATGTCCCA;MAPQ=60;MATEID=342258:2;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_6_54684001_54709001_67C;SPAN=322;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:30:30:8.4:92.4,8.4,0:30:0:-92.42:92.42\n6\t54691973\t342258:2\tA\t]6:54691651]A\t92\tPASS\tEVDNC=ASSMB;HOMSEQ=AAAAGAATGTCCCA;MAPQ=60;MATEID=342258:1;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_6_54684001_54709001_67C;SPAN=322;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:30:30:8.4:92.4,8.4,0:30:0:-92.42:92.42\n6\t58433243\t343345:1\tG\tG[6:61307772[\t89\tPASS\tEVDNC=ASSMB;HOMSEQ=TTCAGACAAAAAGTAGAAAGAAG;MAPQ=60;MATEID=343345:2;MATENM=1;NM=8;NUMPARTS=2;SCTG=c_6_58432501_58457501_60C;SPAN=2874529;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:27:29:8.1:89.1,8.1,0:27:0:-88.89:88.89\n6\t61027338\t344228:1\tC\t[6:61137183[C\t23\tPASS\tDISC_MAPQ=18;EVDNC=DSCRD;IMPRECISE;MAPQ=18;MATEID=344228:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:61027338(-)-6:61137183(-)__6_61127501_61152501D;SPAN=109845;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:8:7:2.1:23.1,2.1,0:0:8:-23.11:23.11\n6\t61048724\t344203:1\tT\t[6:61096462[T\t46\tPASS\tDISC_MAPQ=23;EVDNC=DSCRD;IMPRECISE;MAPQ=23;MATEID=344203:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:61048724(-)-6:61096462(-)__6_61078501_61103501D;SPAN=47738;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:14:16:4.2:46.2,4.2,0:0:14:-44.69:44.69\n6\t61096462\t344203:2\tT\t[6:61048724[T\t46\tPASS\tDISC_MAPQ=21;EVDNC=DSCRD;IMPRECISE;MAPQ=21;MATEID=344203:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:61048724(-)-6:61096462(-)__6_61078501_61103501D;SPAN=47738;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:14:16:4.2:46.2,4.2,0:0:14:-44.69:44.69\n6\t61137183\t344228:2\tC\t[6:61027338[C\t23\tPASS\tDISC_MAPQ=18;EVDNC=DSCRD;IMPRECISE;MAPQ=18;MATEID=344228:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:61027338(-)-6:61137183(-)__6_61127501_61152501D;SPAN=109845;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:8:7:2.1:23.1,2.1,0:0:8:-23.11:23.11\n6\t61307772\t343345:2\tT\t]6:58433243]T\t89\tPASS\tEVDNC=ASSMB;HOMSEQ=TTCAGACAAAAAGTAGAAAGAAG;MAPQ=60;MATEID=343345:1;MATENM=8;NM=1;NUMPARTS=2;SCTG=c_6_58432501_58457501_60C;SPAN=2874529;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:27:29:8.1:89.1,8.1,0:27:0:-88.89:88.89\n6\t61386959\t344524:1\tT\t]6:61388471]T\t14\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=344524:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:61386959(-)-6:61388471(+)__6_61372501_61397501D;SPAN=1512;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:41:14.9:14.9,0,87.5:0:8:-14.88:17.89\n6\t61388471\t344524:2\tT\tT[6:61386959[\t14\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=344524:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:61386959(-)-6:61388471(+)__6_61372501_61397501D;SPAN=1512;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:41:14.9:14.9,0,87.5:0:8:-14.88:17.89\n6\t61392871\t344529:1\tT\tT[6:61396289[\t38\tPASS\tDISC_MAPQ=59;EVDNC=ASDIS;HOMSEQ=TTGATAGAGCAGTTTTGAAACACTCTTTTTGT;MAPQ=60;MATEID=344529:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_61372501_61397501_122C;SPAN=3418;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:27:28.7:38.6,0,28.7:8:8:-38.69:38.69\n6\t61396289\t344529:2\tT\t]6:61392871]T\t38\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TTGATAGAGCAGTTTTGAAACACTCTTTTTGT;MAPQ=60;MATEID=344529:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_61372501_61397501_122C;SPAN=3418;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:27:28.7:38.6,0,28.7:8:8:-38.69:38.69\n6\t61411159\t344683:1\tC\tC[6:61420481[\t20\tPASS\tDISC_MAPQ=52;EVDNC=DSCRD;IMPRECISE;MAPQ=52;MATEID=344683:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:61411159(+)-6:61420481(-)__6_61397001_61422001D;SPAN=9322;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:23:20:20,0,36.5:0:8:-19.94:20.25\n6\t61420481\t344683:2\tG\t]6:61411159]G\t20\tPASS\tDISC_MAPQ=58;EVDNC=DSCRD;IMPRECISE;MAPQ=58;MATEID=344683:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:61411159(+)-6:61420481(-)__6_61397001_61422001D;SPAN=9322;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:23:20:20,0,36.5:0:8:-19.94:20.25\n6\t63957118\t345607:1\tA\tA[6:63958454[\t11\tPASS\tEVDNC=ASSMB;HOMSEQ=TGAA;MAPQ=60;MATEID=345607:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_63945001_63970001_71C;SPAN=1336;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:6:29:11.6:11.6,0,61.1:6:0:-11.65:13.59\n6\t63958454\t345607:2\tT\t]6:63957118]T\t11\tPASS\tEVDNC=ASSMB;HOMSEQ=TGAA;MAPQ=60;MATEID=345607:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_63945001_63970001_71C;SPAN=1336;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:6:29:11.6:11.6,0,61.1:6:0:-11.65:13.59\n6\t64312984\t345733:1\tG\t]6:64313296]G\t25\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=GATCA;MAPQ=60;MATEID=345733:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_64312501_64337501_31C;SPAN=312;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:38:25.7:25.7,0,68.6:11:2:-25.63:26.77\n6\t64313296\t345733:2\tA\tA[6:64312984[\t25\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=GATCA;MAPQ=60;MATEID=345733:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_64312501_64337501_31C;SPAN=312;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:38:25.7:25.7,0,68.6:11:2:-25.63:26.77\n6\t64475269\t345800:1\tA\tA[6:64475574[\t25\tPASS\tEVDNC=ASSMB;HOMSEQ=GAAAAGAAAA;MAPQ=60;MATEID=345800:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_64459501_64484501_10C;SPAN=305;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:16:12.2:25.4,0,12.2:9:0:-25.35:25.35\n6\t64475574\t345800:2\tG\t]6:64475269]G\t25\tPASS\tEVDNC=ASSMB;HOMSEQ=GAAAAGAAAA;MAPQ=60;MATEID=345800:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_64459501_64484501_10C;SPAN=305;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:16:12.2:25.4,0,12.2:9:0:-25.35:25.35\n6\t65550146\t346163:1\tT\tT[6:65552129[\t30\tPASS\tEVDNC=ASSMB;HOMSEQ=TACTATATCTTT;MAPQ=60;MATEID=346163:2;MATENM=2;NM=1;NUMPARTS=2;SCTG=c_6_65537501_65562501_69C;SPAN=1983;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:32:30.8:30.8,0,47.3:12:0:-30.62:30.87\n6\t65552129\t346163:2\tT\t]6:65550146]T\t30\tPASS\tEVDNC=ASSMB;HOMSEQ=TACTATATCTTT;MAPQ=60;MATEID=346163:1;MATENM=1;NM=2;NUMPARTS=2;SCTG=c_6_65537501_65562501_69C;SPAN=1983;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:32:30.8:30.8,0,47.3:12:0:-30.62:30.87\n6\t65564962\t346167:1\tA\tA[6:65565273[\t90\tPASS\tEVDNC=ASSMB;HOMSEQ=AAAAAGTGGGTGAA;MAPQ=60;MATEID=346167:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_65562001_65587001_80C;SPAN=311;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:33:66:74:90.5,0,74:33:0:-90.45:90.45\n6\t65565273\t346167:2\tA\t]6:65564962]A\t90\tPASS\tEVDNC=ASSMB;HOMSEQ=AAAAAGTGGGTGAA;MAPQ=60;MATEID=346167:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_65562001_65587001_80C;SPAN=311;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:33:66:74:90.5,0,74:33:0:-90.45:90.45\n6\t66298837\t346482:1\tT\tT[6:66339024[\t33\tPASS\tEVDNC=ASSMB;HOMSEQ=CT;MAPQ=60;MATEID=346482:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_66321501_66346501_25C;SPAN=40187;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:11:13:0.3:33,0.3,0:11:0:-34.67:34.67\n6\t66331014\t346487:1\tT\tT[6:66333296[\t26\tPASS\tDISC_MAPQ=54;EVDNC=DSCRD;IMPRECISE;MAPQ=54;MATEID=346487:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:66331014(+)-6:66333296(-)__6_66321501_66346501D;SPAN=2282;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:9:3:2.4:26.4,2.4,0:0:9:-26.41:26.41\n6\t66333296\t346487:2\tG\t]6:66331014]G\t26\tPASS\tDISC_MAPQ=55;EVDNC=DSCRD;IMPRECISE;MAPQ=55;MATEID=346487:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:66331014(+)-6:66333296(-)__6_66321501_66346501D;SPAN=2282;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:9:3:2.4:26.4,2.4,0:0:9:-26.41:26.41\n6\t66339024\t346482:2\tC\t]6:66298837]C\t33\tPASS\tEVDNC=ASSMB;HOMSEQ=CT;MAPQ=60;MATEID=346482:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_66321501_66346501_25C;SPAN=40187;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:11:13:0.3:33,0.3,0:11:0:-34.67:34.67\n6\t66782594\t346626:1\tA\t[6:66782833[A\t20\tPASS\tDISC_MAPQ=55;EVDNC=TSI_L;HOMSEQ=TATATATAATATCATATATATACACAAAT;MAPQ=60;MATEID=346626:2;MATENM=0;NM=3;NUMPARTS=3;REPSEQ=TATATATA;SCTG=c_6_66762501_66787501_2C;SPAN=239;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:22:8:20,0,8:13:10:-20.11:20.11\n6\t66782833\t346626:2\tT\t[6:66782594[T\t20\tPASS\tDISC_MAPQ=60;EVDNC=TSI_L;HOMSEQ=TATATATAATATCATATATATACACAAAT;MAPQ=60;MATEID=346626:1;MATENM=3;NM=0;NUMPARTS=3;REPSEQ=TATATATA;SCTG=c_6_66762501_66787501_2C;SPAN=239;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:22:8:20,0,8:13:10:-20.11:20.11\n6\t68894805\t347539:1\tA\t]6:68897984]A\t34\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=A;MAPQ=60;MATEID=347539:2;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_6_68894001_68919001_76C;SPAN=3179;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:30:34.4:34.4,0,41:9:6:-34.48:34.51\n6\t68897984\t347539:2\tA\tA[6:68894805[\t34\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=A;MAPQ=60;MATEID=347539:1;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_6_68894001_68919001_76C;SPAN=3179;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:30:34.4:34.4,0,41:9:6:-34.48:34.51\n6\t69480862\t347749:1\tC\tC[6:69482377[\t22\tPASS\tDISC_MAPQ=57;EVDNC=DSCRD;IMPRECISE;MAPQ=57;MATEID=347749:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:69480862(+)-6:69482377(-)__6_69482001_69507001D;SPAN=1515;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:13:9.5:22.7,0,9.5:0:8:-23.02:23.02\n6\t69482377\t347749:2\tT\t]6:69480862]T\t22\tPASS\tDISC_MAPQ=35;EVDNC=DSCRD;IMPRECISE;MAPQ=35;MATEID=347749:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:69480862(+)-6:69482377(-)__6_69482001_69507001D;SPAN=1515;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:13:9.5:22.7,0,9.5:0:8:-23.02:23.02\n6\t69542531\t347773:2\tA\tA[4:70133000[\t20\tPASS\tEVDNC=ASSMB;HOMSEQ=ATCCCA;MAPQ=60;MATEID=347773:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_69531001_69556001_105C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:7:10:3.8:20.3,0,3.8:7:0:-20.82:20.82\n6\t69542551\t347771:2\tG\t]4:70132919]G\t29\tPASS\tEVDNC=ASSMB;HOMSEQ=GCT;MAPQ=60;MATEID=347771:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_69531001_69556001_22C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:13:2.9:29.3,0,2.9:10:0:-30.55:30.55\n6\t70153588\t423222:1\tT\t]7:120983381]T\t29\tPASS\tDISC_MAPQ=41;EVDNC=DSCRD;IMPRECISE;MAPQ=41;MATEID=423222:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:70153588(-)-7:120983381(+)__7_120981001_121006001D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:10:7:2.7:29.7,2.7,0:0:10:-29.71:29.71\n6\t71198460\t348415:1\tA\t]6:71198552]A\t61\tPASS\tEVDNC=ASSMB;HOMSEQ=AAA;MAPQ=60;MATEID=348415:2;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_6_71197001_71222001_76C;SPAN=92;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:22:39:35.3:61.7,0,35.3:22:0:-62:62\n6\t71198552\t348415:2\tA\tA[6:71198460[\t61\tPASS\tEVDNC=ASSMB;HOMSEQ=AAA;MAPQ=60;MATEID=348415:1;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_6_71197001_71222001_76C;SPAN=92;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:22:39:35.3:61.7,0,35.3:22:0:-62:62\n6\t71861739\t348671:1\tT\tT[6:71862047[\t34\tPASS\tEVDNC=ASSMB;HOMSEQ=TTAAGGTGTGTTTT;MAPQ=60;MATEID=348671:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_71858501_71883501_62C;SPAN=308;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:18:8.3:34.7,0,8.3:12:0:-35.24:35.24\n6\t71862047\t348671:2\tT\t]6:71861739]T\t34\tPASS\tEVDNC=ASSMB;HOMSEQ=TTAAGGTGTGTTTT;MAPQ=60;MATEID=348671:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_71858501_71883501_62C;SPAN=308;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:18:8.3:34.7,0,8.3:12:0:-35.24:35.24\n6\t73446443\t349111:1\tG\tG[6:73446755[\t59\tPASS\tEVDNC=ASSMB;HOMSEQ=AAAAAAAAAAATCG;MAPQ=60;MATEID=349111:2;MATENM=3;NM=0;NUMPARTS=2;SCTG=c_6_73426501_73451501_5C;SPAN=312;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:20:15:5.4:59.4,5.4,0:20:0:-59.41:59.41\n6\t73446755\t349111:2\tA\t]6:73446443]A\t59\tPASS\tEVDNC=ASSMB;HOMSEQ=AAAAAAAAAAATCG;MAPQ=60;MATEID=349111:1;MATENM=0;NM=3;NUMPARTS=2;SCTG=c_6_73426501_73451501_5C;SPAN=312;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:20:15:5.4:59.4,5.4,0:20:0:-59.41:59.41\n6\t73882346\t349295:1\tT\tT[6:73892724[\t62\tPASS\tEVDNC=ASSMB;HOMSEQ=TT;MAPQ=60;MATEID=349295:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_73892001_73917001_127C;SPAN=10378;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:21:11:5.7:62.7,5.7,0:21:0:-62.72:62.72\n6\t73892724\t349295:2\tT\t]6:73882346]T\t62\tPASS\tEVDNC=ASSMB;HOMSEQ=TT;MAPQ=60;MATEID=349295:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_73892001_73917001_127C;SPAN=10378;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:21:11:5.7:62.7,5.7,0:21:0:-62.72:62.72\n6\t74122788\t349391:1\tG\tG[6:74123744[\t21\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=G;MAPQ=60;MATEID=349391:2;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_6_74112501_74137501_60C;SPAN=956;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:18:21.5:21.5,0,21.5:6:3:-21.35:21.36\n6\t74123744\t349391:2\tG\t]6:74122788]G\t21\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=G;MAPQ=60;MATEID=349391:1;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_6_74112501_74137501_60C;SPAN=956;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:18:21.5:21.5,0,21.5:6:3:-21.35:21.36\n6\t74155824\t349406:1\tT\tT[6:74156868[\t66\tPASS\tDISC_MAPQ=57;EVDNC=DSCRD;IMPRECISE;MAPQ=57;MATEID=349406:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:74155824(+)-6:74156868(-)__6_74137001_74162001D;SPAN=1044;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:22:9:6:66,6,0:0:22:-66.02:66.02\n6\t74156868\t349406:2\tG\t]6:74155824]G\t66\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=349406:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:74155824(+)-6:74156868(-)__6_74137001_74162001D;SPAN=1044;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:22:9:6:66,6,0:0:22:-66.02:66.02\n6\t75321511\t349695:1\tT\t[18:68905257[T\t49\tPASS\tDISC_MAPQ=5;EVDNC=ASDIS;HOMSEQ=TC;MAPQ=18;MATEID=349695:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_6_75313001_75338001_23C;SPAN=-1;SUBN=2;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:16:17:4.5:49.5,4.5,0:14:3:-49.51:49.51\n6\t75610907\t349808:1\tG\t]6:75610995]G\t50\tPASS\tEVDNC=ASSMB;HOMSEQ=GA;MAPQ=60;MATEID=349808:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_75607001_75632001_52C;SPAN=88;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:18:34:33.5:50,0,33.5:18:0:-49.98:49.98\n6\t75610995\t349808:2\tA\tA[6:75610907[\t50\tPASS\tEVDNC=ASSMB;HOMSEQ=GA;MAPQ=60;MATEID=349808:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_75607001_75632001_52C;SPAN=88;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:18:34:33.5:50,0,33.5:18:0:-49.98:49.98\n6\t75678281\t349877:1\tA\t]6:75770245]A\t59\tPASS\tEVDNC=ASSMB;HOMSEQ=AGG;MAPQ=60;MATEID=349877:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_75754001_75779001_49C;SPAN=91964;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:20:19:5.4:59.4,5.4,0:20:0:-59.41:59.41\n6\t75770245\t349877:2\tG\tG[6:75678281[\t59\tPASS\tEVDNC=ASSMB;HOMSEQ=AGG;MAPQ=60;MATEID=349877:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_75754001_75779001_49C;SPAN=91964;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:20:19:5.4:59.4,5.4,0:20:0:-59.41:59.41\n6\t76727539\t350204:1\tC\tC[6:76749271[\t20\tPASS\tDISC_MAPQ=50;EVDNC=ASDIS;HOMSEQ=TGTGTGGGAGTCTAAGTCTCTTTGTAGGTC;MAPQ=46;MATEID=350204:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_6_76734001_76759001_21C;SPAN=21732;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:7:10:3.8:20.3,0,3.8:2:6:-20.82:20.82\n6\t76749271\t350204:2\tT\t]6:76727539]T\t20\tPASS\tDISC_MAPQ=34;EVDNC=ASDIS;HOMSEQ=TGTGTGGGAGTCTAAGTCTCTTTGTAGGTC;MAPQ=46;MATEID=350204:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_6_76734001_76759001_21C;SPAN=21732;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:7:10:3.8:20.3,0,3.8:2:6:-20.82:20.82\n6\t77210403\t350343:1\tT\tT[6:77210694[\t62\tPASS\tEVDNC=ASSMB;HOMSEQ=AAAAATGCTACTGATTTTTGT;MAPQ=60;MATEID=350343:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_77199501_77224501_75C;SPAN=291;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:21:19:5.7:62.7,5.7,0:21:0:-62.72:62.72\n6\t77210694\t350343:2\tA\t]6:77210403]A\t62\tPASS\tEVDNC=ASSMB;HOMSEQ=AAAAATGCTACTGATTTTTGT;MAPQ=60;MATEID=350343:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_77199501_77224501_75C;SPAN=291;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:21:19:5.7:62.7,5.7,0:21:0:-62.72:62.72\n6\t77939704\t350614:2\tT\t[3:110032910[T\t47\tPASS\tDISC_MAPQ=57;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=350614:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_6_77934501_77959501_20C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:16:20:1.1:47.3,0,1.1:8:9:-49.48:49.48\n6\t78257477\t350715:1\tT\tT[6:78326759[\t46\tPASS\tEVDNC=ASSMB;INSERTION=GTCACCCAGTCTGGAGTGCTGT;MAPQ=60;MATEID=350715:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_6_78326501_78351501_1C;SPAN=69282;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:16:3:4.2:46.2,4.2,0:16:0:-46.21:46.21\n6\t78326759\t350715:2\tG\t]6:78257477]G\t46\tPASS\tEVDNC=ASSMB;INSERTION=GTCACCCAGTCTGGAGTGCTGT;MAPQ=60;MATEID=350715:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_6_78326501_78351501_1C;SPAN=69282;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:16:3:4.2:46.2,4.2,0:16:0:-46.21:46.21\n6\t79361711\t350977:1\tA\tA[6:79363612[\t36\tPASS\tDISC_MAPQ=24;EVDNC=DSCRD;IMPRECISE;MAPQ=24;MATEID=350977:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:79361711(+)-6:79363612(-)__6_79355501_79380501D;SPAN=1901;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:34:36.8:36.8,0,46.7:0:14:-36.66:36.75\n6\t79361925\t350980:1\tG\t]6:79363969]G\t46\tPASS\tDISC_MAPQ=36;EVDNC=DSCRD;IMPRECISE;MAPQ=36;MATEID=350980:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:79361925(-)-6:79363969(+)__6_79355501_79380501D;SPAN=2044;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:16:16:4.2:46.2,4.2,0:0:16:-46.21:46.21\n6\t79363612\t350977:2\tT\t]6:79361711]T\t36\tPASS\tDISC_MAPQ=40;EVDNC=DSCRD;IMPRECISE;MAPQ=40;MATEID=350977:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:79361711(+)-6:79363612(-)__6_79355501_79380501D;SPAN=1901;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:34:36.8:36.8,0,46.7:0:14:-36.66:36.75\n6\t79363969\t350980:2\tC\tC[6:79361925[\t46\tPASS\tDISC_MAPQ=48;EVDNC=DSCRD;IMPRECISE;MAPQ=48;MATEID=350980:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:79361925(-)-6:79363969(+)__6_79355501_79380501D;SPAN=2044;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:16:16:4.2:46.2,4.2,0:0:16:-46.21:46.21\n6\t81434730\t351633:1\tA\tA[6:81469346[\t26\tPASS\tDISC_MAPQ=46;EVDNC=DSCRD;IMPRECISE;MAPQ=46;MATEID=351633:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:81434730(+)-6:81469346(-)__6_81462501_81487501D;SPAN=34616;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:13:6.2:26,0,6.2:0:9:-26.69:26.69\n6\t81435065\t351618:1\tG\t]6:81469570]G\t29\tPASS\tDISC_MAPQ=19;EVDNC=DSCRD;IMPRECISE;MAPQ=19;MATEID=351618:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:81435065(-)-6:81469570(+)__6_81413501_81438501D;SPAN=34505;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:9:10:2.7:29.7,2.7,0:0:9:-29.08:29.08\n6\t81469346\t351633:2\tG\t]6:81434730]G\t26\tPASS\tDISC_MAPQ=20;EVDNC=DSCRD;IMPRECISE;MAPQ=20;MATEID=351633:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:81434730(+)-6:81469346(-)__6_81462501_81487501D;SPAN=34616;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:13:6.2:26,0,6.2:0:9:-26.69:26.69\n6\t81469570\t351618:2\tA\tA[6:81435065[\t29\tPASS\tDISC_MAPQ=20;EVDNC=DSCRD;IMPRECISE;MAPQ=20;MATEID=351618:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:81435065(-)-6:81469570(+)__6_81413501_81438501D;SPAN=34505;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:9:10:2.7:29.7,2.7,0:0:9:-29.08:29.08\n6\t82966367\t352039:1\tA\tA[6:82966669[\t11\tPASS\tEVDNC=ASSMB;HOMSEQ=AAAAACCACTGA;MAPQ=60;MATEID=352039:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_82957001_82982001_48C;SPAN=302;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:5:19:11.3:11.3,0,34.4:5:0:-11.16:11.92\n6\t82966669\t352039:2\tA\t]6:82966367]A\t11\tPASS\tEVDNC=ASSMB;HOMSEQ=AAAAACCACTGA;MAPQ=60;MATEID=352039:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_82957001_82982001_48C;SPAN=302;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:5:19:11.3:11.3,0,34.4:5:0:-11.16:11.92\n6\t84608433\t352428:1\tT\tT[6:84614503[\t89\tPASS\tEVDNC=ASSMB;HOMSEQ=AGAAATGT;MAPQ=60;MATEID=352428:2;MATENM=3;NM=2;NUMPARTS=2;SCTG=c_6_84598501_84623501_36C;SPAN=6070;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:29:22:8.1:89.1,8.1,0:29:0:-89.12:89.12\n6\t84614503\t352428:2\tA\t]6:84608433]A\t89\tPASS\tEVDNC=ASSMB;HOMSEQ=AGAAATGT;MAPQ=60;MATEID=352428:1;MATENM=2;NM=3;NUMPARTS=2;SCTG=c_6_84598501_84623501_36C;SPAN=6070;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:29:22:8.1:89.1,8.1,0:29:0:-89.12:89.12\n6\t85316647\t352651:1\tC\tC[6:85316950[\t75\tPASS\tEVDNC=ASSMB;HOMSEQ=AAGGGTGGGTCCC;MAPQ=60;MATEID=352651:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_6_85309001_85334001_16C;SPAN=303;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:25:15:6.9:75.9,6.9,0:25:0:-75.92:75.92\n6\t85316950\t352651:2\tA\t]6:85316647]A\t75\tPASS\tEVDNC=ASSMB;HOMSEQ=AAGGGTGGGTCCC;MAPQ=60;MATEID=352651:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_6_85309001_85334001_16C;SPAN=303;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:25:15:6.9:75.9,6.9,0:25:0:-75.92:75.92\n6\t85434593\t352692:1\tC\tC[6:85434915[\t43\tPASS\tEVDNC=ASSMB;HOMSEQ=GAAATTGCAGGCC;MAPQ=60;MATEID=352692:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_6_85431501_85456501_27C;SPAN=322;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:15:21:7.4:43.7,0,7.4:15:0:-44.87:44.87\n6\t85434915\t352692:2\tG\t]6:85434593]G\t43\tPASS\tEVDNC=ASSMB;HOMSEQ=GAAATTGCAGGCC;MAPQ=60;MATEID=352692:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_6_85431501_85456501_27C;SPAN=322;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:15:21:7.4:43.7,0,7.4:15:0:-44.87:44.87\n6\t85914115\t352816:1\tC\tC[6:85916115[\t23\tPASS\tEVDNC=ASSMB;INSERTION=CATGGGG;MAPQ=60;MATEID=352816:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_85897001_85922001_1C;SPAN=2000;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:23:23.3:23.3,0,33.2:9:0:-23.24:23.37\n6\t85916115\t352816:2\tG\t]6:85914115]G\t23\tPASS\tEVDNC=ASSMB;INSERTION=CATGGGG;MAPQ=60;MATEID=352816:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_85897001_85922001_1C;SPAN=2000;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:23:23.3:23.3,0,33.2:9:0:-23.24:23.37\n6\t85999056\t352839:1\tT\tT[6:86005120[\t46\tPASS\tDISC_MAPQ=54;EVDNC=DSCRD;IMPRECISE;MAPQ=54;MATEID=352839:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:85999056(+)-6:86005120(-)__6_85995001_86020001D;SPAN=6064;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:15:3:4.2:46.2,4.2,0:0:15:-46.21:46.21\n6\t86005120\t352839:2\tT\t]6:85999056]T\t46\tPASS\tDISC_MAPQ=28;EVDNC=DSCRD;IMPRECISE;MAPQ=28;MATEID=352839:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:85999056(+)-6:86005120(-)__6_85995001_86020001D;SPAN=6064;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:15:3:4.2:46.2,4.2,0:0:15:-46.21:46.21\n6\t87514975\t353351:1\tA\tA[6:87625111[\t40\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=353351:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_87612001_87637001_4C;SPAN=110136;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:21:10.7:40.4,0,10.7:14:0:-41.11:41.11\n6\t87603225\t353460:1\tG\t]6:87844554]G\t26\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=GC;MAPQ=60;MATEID=353460:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_6_87832501_87857501_128C;SPAN=241329;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:9:8:2.4:26.4,2.4,0:7:3:-26.41:26.41\n6\t87625111\t353351:2\tT\t]6:87514975]T\t40\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=353351:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_87612001_87637001_4C;SPAN=110136;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:21:10.7:40.4,0,10.7:14:0:-41.11:41.11\n6\t87844554\t353460:2\tC\tC[6:87603225[\t26\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=GC;MAPQ=60;MATEID=353460:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_6_87832501_87857501_128C;SPAN=241329;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:9:8:2.4:26.4,2.4,0:7:3:-26.41:26.41\n6\t92996975\t354864:1\tG\t]6:93033903]G\t46\tPASS\tDISC_MAPQ=58;EVDNC=DSCRD;IMPRECISE;MAPQ=58;MATEID=354864:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:92996975(-)-6:93033903(+)__6_93026501_93051501D;SPAN=36928;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:16:16:4.2:46.2,4.2,0:0:16:-46.21:46.21\n6\t93033903\t354864:2\tT\tT[6:92996975[\t46\tPASS\tDISC_MAPQ=17;EVDNC=DSCRD;IMPRECISE;MAPQ=17;MATEID=354864:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:92996975(-)-6:93033903(+)__6_93026501_93051501D;SPAN=36928;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:16:16:4.2:46.2,4.2,0:0:16:-46.21:46.21\n6\t94031356\t355198:1\tT\tT]6:94031699]\t46\tPASS\tEVDNC=ASSMB;INSERTION=G;MAPQ=60;MATEID=355198:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_94006501_94031501_12C;SPAN=343;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:16:12:4.2:46.2,4.2,0:16:0:-46.21:46.21\n6\t94031356\t355209:1\tT\tT[Un_KN707748v1_decoy:1[\t99\tPASS\tDISC_MAPQ=255;EVDNC=TSI_G;INSERTION=GGAGTTCCAATACATCTGGCAGCAGACTTTTCAGTGGAAATCTTACAGGCCGAGAGAGTGGCATGACATATTTAAAGTGCTGAAGGAAAAAACAAAAAACAAAAAACAAAAAACTTTTATCCTAGAATGGTATATCTGGTGAAAATAACCTTCAAGAGTGAGGGAGAAATAAAGACTTTCCTATACAAACAAACTGAGGGATTTCATCAATACTAGACCTGTCTTACACAAATGGTCAAGGGTACTCTGCAATCTGAAGGAAAAAGTATGTTAATGAGCAACAAAAAGTCAGCTGAAGGTACAAAATTCACTGGTAATAGCACACAGAAAAACACAGAATATTATAACAA;MAPQ=60;MATEID=355209:2;MATENM=1;NM=0;NUMPARTS=3;SCTG=c_6_94031001_94056001_14C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:47:12:12.9:141.9,12.9,0:47:0:-141.9:141.9\n6\t94031699\t355198:2\tC\tC]6:94031356]\t46\tPASS\tEVDNC=ASSMB;INSERTION=G;MAPQ=60;MATEID=355198:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_94006501_94031501_12C;SPAN=343;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:16:12:4.2:46.2,4.2,0:16:0:-46.21:46.21\n6\t94103373\t355239:2\tA\t[1:53954647[A\t49\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AATA;MAPQ=60;MATEID=355239:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_94080001_94105001_4C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:16:17:4.5:49.5,4.5,0:10:12:-49.51:49.51\n6\t94483606\t355385:1\tA\tA[6:94484619[\t95\tPASS\tEVDNC=ASSMB;HOMSEQ=TA;MAPQ=60;MATEID=355385:2;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_6_94472001_94497001_0C;SPAN=1013;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:32:17:8.7:95.7,8.7,0:32:0:-95.72:95.72\n6\t94484619\t355385:2\tT\t]6:94483606]T\t95\tPASS\tEVDNC=ASSMB;HOMSEQ=TA;MAPQ=60;MATEID=355385:1;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_6_94472001_94497001_0C;SPAN=1013;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:32:17:8.7:95.7,8.7,0:32:0:-95.72:95.72\n6\t94949156\t355480:1\tT\tT[6:94949479[\t69\tPASS\tEVDNC=ASSMB;HOMSEQ=AACAACAATGT;MAPQ=60;MATEID=355480:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_6_94937501_94962501_19C;SPAN=323;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:21:23:6.3:69.3,6.3,0:21:0:-68.32:68.32\n6\t94949479\t355480:2\tA\t]6:94949156]A\t69\tPASS\tEVDNC=ASSMB;HOMSEQ=AACAACAATGT;MAPQ=60;MATEID=355480:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_6_94937501_94962501_19C;SPAN=323;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:21:23:6.3:69.3,6.3,0:21:0:-68.32:68.32\n6\t95104597\t355551:1\tG\t]6:95122065]G\t28\tPASS\tEVDNC=ASSMB;HOMSEQ=GA;MAPQ=60;MATEID=355551:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_95109001_95134001_93C;SPAN=17468;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:16:8.9:28.7,0,8.9:10:0:-28.89:28.89\n6\t95122065\t355551:2\tA\tA[6:95104597[\t28\tPASS\tEVDNC=ASSMB;HOMSEQ=GA;MAPQ=60;MATEID=355551:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_95109001_95134001_93C;SPAN=17468;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:16:8.9:28.7,0,8.9:10:0:-28.89:28.89\n6\t95251293\t355670:1\tT\tT[6:95252916[\t52\tPASS\tDISC_MAPQ=53;EVDNC=DSCRD;IMPRECISE;MAPQ=53;MATEID=355670:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:95251293(+)-6:95252916(-)__6_95231501_95256501D;SPAN=1623;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:18:16:4.8:52.8,4.8,0:0:18:-52.81:52.81\n6\t95252916\t355670:2\tA\t]6:95251293]A\t52\tPASS\tDISC_MAPQ=48;EVDNC=DSCRD;IMPRECISE;MAPQ=48;MATEID=355670:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:95251293(+)-6:95252916(-)__6_95231501_95256501D;SPAN=1623;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:18:16:4.8:52.8,4.8,0:0:18:-52.81:52.81\n6\t95303196\t355697:1\tT\tT[6:95303500[\t44\tPASS\tEVDNC=ASSMB;HOMSEQ=TCCCAAATCTTTTT;MAPQ=60;MATEID=355697:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_95280501_95305501_59C;SPAN=304;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:15:19:1.4:44.3,0,1.4:15:0:-46.2:46.2\n6\t95303500\t355697:2\tT\t]6:95303196]T\t44\tPASS\tEVDNC=ASSMB;HOMSEQ=TCCCAAATCTTTTT;MAPQ=60;MATEID=355697:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_95280501_95305501_59C;SPAN=304;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:15:19:1.4:44.3,0,1.4:15:0:-46.2:46.2\n6\t97039514\t356253:1\tT\tT[6:97039732[\t24\tPASS\tEVDNC=ASSMB;INSERTION=ACAATAG;MAPQ=60;MATEID=356253:2;MATENM=5;NM=0;NUMPARTS=2;SCTG=c_6_97020001_97045001_20C;SPAN=218;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:20:24.2:24.2,0,24.2:9:0:-24.09:24.09\n6\t97039732\t356253:2\tA\t]6:97039514]A\t24\tPASS\tEVDNC=ASSMB;INSERTION=ACAATAG;MAPQ=60;MATEID=356253:1;MATENM=0;NM=5;NUMPARTS=2;SCTG=c_6_97020001_97045001_20C;SPAN=218;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:20:24.2:24.2,0,24.2:9:0:-24.09:24.09\n6\t99586625\t356965:1\tA\tA[6:99587446[\t46\tPASS\tEVDNC=ASSMB;INSERTION=ATTGC;MAPQ=60;MATEID=356965:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_99568001_99593001_107C;SPAN=821;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:14:15:4.2:46.2,4.2,0:14:0:-46.19:46.19\n6\t99587446\t356965:2\tT\t]6:99586625]T\t46\tPASS\tEVDNC=ASSMB;INSERTION=ATTGC;MAPQ=60;MATEID=356965:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_99568001_99593001_107C;SPAN=821;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:14:15:4.2:46.2,4.2,0:14:0:-46.19:46.19\n6\t101046817\t357372:1\tC\tC[6:101048733[\t47\tPASS\tDISC_MAPQ=58;EVDNC=DSCRD;IMPRECISE;MAPQ=58;MATEID=357372:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:101046817(+)-6:101048733(-)__6_101038001_101063001D;SPAN=1916;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:16:20:1.1:47.3,0,1.1:0:16:-49.48:49.48\n6\t101048733\t357372:2\tG\t]6:101046817]G\t47\tPASS\tDISC_MAPQ=51;EVDNC=DSCRD;IMPRECISE;MAPQ=51;MATEID=357372:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:101046817(+)-6:101048733(-)__6_101038001_101063001D;SPAN=1916;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:16:20:1.1:47.3,0,1.1:0:16:-49.48:49.48\n6\t101065929\t357378:2\tG\t[4:63062069[G\t69\tPASS\tDISC_MAPQ=23;EVDNC=ASDIS;INSERTION=TACAAACTCACTGGGAGGAA;MAPQ=57;MATEID=357378:1;MATENM=1;NM=4;NUMPARTS=2;SCTG=c_6_101062501_101087501_4C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:23:15:6.3:69.3,6.3,0:22:3:-69.32:69.32\n6\t102367247\t357846:1\tT\tT[6:102367939[\t41\tPASS\tEVDNC=ASSMB;INSERTION=TTA;MAPQ=60;MATEID=357846:2;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_6_102361001_102386001_92C;SPAN=692;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:15:30:34.4:41,0,34.4:15:0:-41.11:41.11\n6\t102367939\t357846:2\tC\t]6:102367247]C\t41\tPASS\tEVDNC=ASSMB;INSERTION=TTA;MAPQ=60;MATEID=357846:1;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_6_102361001_102386001_92C;SPAN=692;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:15:30:34.4:41,0,34.4:15:0:-41.11:41.11\n6\t103289589\t358187:1\tT\tT[6:103315015[\t52\tPASS\tEVDNC=ASSMB;INSERTION=GCCA;MAPQ=60;MATEID=358187:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_103292001_103317001_15C;SPAN=25426;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:18:8:4.8:52.8,4.8,0:18:0:-52.81:52.81\n6\t103315015\t358187:2\tA\t]6:103289589]A\t52\tPASS\tEVDNC=ASSMB;INSERTION=GCCA;MAPQ=60;MATEID=358187:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_103292001_103317001_15C;SPAN=25426;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:18:8:4.8:52.8,4.8,0:18:0:-52.81:52.81\n6\t104812953\t358589:1\tC\tC[6:104815883[\t52\tPASS\tEVDNC=ASSMB;HOMSEQ=GC;MAPQ=60;MATEID=358589:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_6_104811001_104836001_23C;SPAN=2930;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:18:18:4.8:52.8,4.8,0:18:0:-52.81:52.81\n6\t104815883\t358589:2\tG\t]6:104812953]G\t52\tPASS\tEVDNC=ASSMB;HOMSEQ=GC;MAPQ=60;MATEID=358589:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_6_104811001_104836001_23C;SPAN=2930;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:18:18:4.8:52.8,4.8,0:18:0:-52.81:52.81\n6\t105050281\t358669:1\tG\tG[6:105051158[\t28\tPASS\tDISC_MAPQ=20;EVDNC=DSCRD;IMPRECISE;MAPQ=20;MATEID=358669:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:105050281(+)-6:105051158(-)__6_105031501_105056501D;SPAN=877;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:15:8.9:28.7,0,8.9:0:10:-29.37:29.37\n6\t105051158\t358669:2\tG\t]6:105050281]G\t28\tPASS\tDISC_MAPQ=49;EVDNC=DSCRD;IMPRECISE;MAPQ=49;MATEID=358669:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:105050281(+)-6:105051158(-)__6_105031501_105056501D;SPAN=877;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:15:8.9:28.7,0,8.9:0:10:-29.37:29.37\n6\t105456034\t358766:1\tT\t]6:105555892]T\t16\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TGA;MAPQ=60;MATEID=358766:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_105448001_105473001_3C;SPAN=99858;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:6:11:10.1:16.7,0,10.1:3:4:-16.78:16.78\n6\t105555892\t358766:2\tA\tA[6:105456034[\t16\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TGA;MAPQ=60;MATEID=358766:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_105448001_105473001_3C;SPAN=99858;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:6:11:10.1:16.7,0,10.1:3:4:-16.78:16.78\n6\t106535761\t359076:1\tT\tT[6:106536067[\t99\tPASS\tEVDNC=ASSMB;HOMSEQ=AGCCACTAACTTTT;MAPQ=60;MATEID=359076:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_106526001_106551001_145C;SPAN=306;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:38:24:10.5:115.5,10.5,0:38:0:-115.5:115.5\n6\t106536067\t359076:2\tA\t]6:106535761]A\t99\tPASS\tEVDNC=ASSMB;HOMSEQ=AGCCACTAACTTTT;MAPQ=60;MATEID=359076:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_106526001_106551001_145C;SPAN=306;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:38:24:10.5:115.5,10.5,0:38:0:-115.5:115.5\n6\t107710138\t359522:1\tT\tT[6:107711199[\t14\tPASS\tEVDNC=ASSMB;INSERTION=TCCTCCCACTCACTCC;MAPQ=60;MATEID=359522:2;MATENM=2;NM=1;NUMPARTS=2;SCTG=c_6_107702001_107727001_125C;SPAN=1061;SUBN=3;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:6:19:14.6:14.6,0,31.1:6:0:-14.47:14.88\n6\t107711199\t359522:2\tA\t]6:107710138]A\t14\tPASS\tEVDNC=ASSMB;INSERTION=TCCTCCCACTCACTCC;MAPQ=60;MATEID=359522:1;MATENM=1;NM=2;NUMPARTS=2;SCTG=c_6_107702001_107727001_125C;SPAN=1061;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:6:19:14.6:14.6,0,31.1:6:0:-14.47:14.88\n6\t111370154\t360501:1\tT\tT[6:111435576[\t22\tPASS\tEVDNC=ASSMB;INSERTION=AATTGCAGCACTATTC;MAPQ=60;MATEID=360501:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_111426001_111451001_23C;SPAN=65422;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:14:12.5:22.4,0,12.5:8:0:-22.62:22.62\n6\t111435576\t360501:2\tA\t]6:111370154]A\t22\tPASS\tEVDNC=ASSMB;INSERTION=AATTGCAGCACTATTC;MAPQ=60;MATEID=360501:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_111426001_111451001_23C;SPAN=65422;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:14:12.5:22.4,0,12.5:8:0:-22.62:22.62\n6\t113883834\t361285:1\tT\t]6:113930762]T\t26\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TC;MAPQ=60;MATEID=361285:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_113925001_113950001_52C;SPAN=46928;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:34:26.9:26.9,0,56.6:7:6:-26.75:27.42\n6\t113930762\t361285:2\tC\tC[6:113883834[\t26\tPASS\tDISC_MAPQ=52;EVDNC=ASDIS;HOMSEQ=TC;MAPQ=60;MATEID=361285:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_113925001_113950001_52C;SPAN=46928;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:34:26.9:26.9,0,56.6:7:6:-26.75:27.42\n6\t115303388\t361736:1\tG\tG[6:115303689[\t0\tPASS\tEVDNC=ASSMB;HOMSEQ=AAAATATTTTTTTTGTG;MAPQ=60;MATEID=361736:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_115297001_115322001_25C;SPAN=301;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/0:12:242:28:0,28,663.4:12:0:28.41:19.29\n6\t115303689\t361736:2\tA\t]6:115303388]A\t0\tPASS\tEVDNC=ASSMB;HOMSEQ=AAAATATTTTTTTTGTG;MAPQ=60;MATEID=361736:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_115297001_115322001_25C;SPAN=301;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/0:12:242:28:0,28,663.4:12:0:28.41:19.29\n6\t116429667\t362079:1\tG\tG[6:116429970[\t59\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AGAAATATGAGGAGTTG;MAPQ=60;MATEID=362079:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_116424001_116449001_4C;SPAN=303;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:20:13:5.4:59.4,5.4,0:14:8:-59.41:59.41\n6\t116429970\t362079:2\tA\t]6:116429667]A\t59\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AGAAATATGAGGAGTTG;MAPQ=60;MATEID=362079:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_116424001_116449001_4C;SPAN=303;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:20:13:5.4:59.4,5.4,0:14:8:-59.41:59.41\n6\t117477466\t362360:1\tA\t]6:117477573]A\t43\tPASS\tEVDNC=ASSMB;INSERTION=AAT;MAPQ=60;MATEID=362360:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_117477501_117502501_43C;SPAN=107;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:16:34:40.1:43.4,0,40.1:16:0:-43.26:43.26\n6\t117477573\t362360:2\tA\tA[6:117477466[\t43\tPASS\tEVDNC=ASSMB;INSERTION=AAT;MAPQ=60;MATEID=362360:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_117477501_117502501_43C;SPAN=107;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:16:34:40.1:43.4,0,40.1:16:0:-43.26:43.26\n6\t118940826\t362740:1\tA\t]6:118941155]A\t18\tPASS\tDISC_MAPQ=45;EVDNC=ASDIS;HOMSEQ=AG;MAPQ=60;MATEID=362740:2;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_6_118923001_118948001_18C;SPAN=329;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:40:18.5:18.5,0,81.2:9:2:-18.47:20.76\n6\t118941155\t362740:2\tG\tG[6:118940826[\t18\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AG;MAPQ=60;MATEID=362740:1;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_6_118923001_118948001_18C;SPAN=329;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:40:18.5:18.5,0,81.2:9:2:-18.47:20.76\n6\t120504096\t363278:1\tA\t]6:120504276]A\t43\tPASS\tEVDNC=ASSMB;HOMSEQ=A;MAPQ=60;MATEID=363278:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_120491001_120516001_16C;SPAN=180;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:17:44:43.7:43.7,0,66.8:17:0:-43.75:44.02\n6\t120504276\t363278:2\tA\tA[6:120504096[\t43\tPASS\tEVDNC=ASSMB;HOMSEQ=A;MAPQ=60;MATEID=363278:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_120491001_120516001_16C;SPAN=180;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:17:44:43.7:43.7,0,66.8:17:0:-43.75:44.02\n6\t120942553\t363442:1\tT\tT[6:120942778[\t72\tPASS\tEVDNC=ASSMB;HOMSEQ=CAACAGTTT;MAPQ=60;MATEID=363442:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_120932001_120957001_31C;SPAN=225;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:24:18:6.6:72.6,6.6,0:24:0:-72.62:72.62\n6\t120942778\t363442:2\tC\t]6:120942553]C\t72\tPASS\tEVDNC=ASSMB;HOMSEQ=CAACAGTTT;MAPQ=60;MATEID=363442:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_120932001_120957001_31C;SPAN=225;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:24:18:6.6:72.6,6.6,0:24:0:-72.62:72.62\n6\t120998160\t363470:1\tT\tT[6:120998471[\t22\tPASS\tEVDNC=ASSMB;HOMSEQ=CCTTTCCCATTCTT;MAPQ=60;MATEID=363470:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_120981001_121006001_34C;SPAN=311;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:14:12.5:22.4,0,12.5:8:0:-22.62:22.62\n6\t120998471\t363470:2\tC\t]6:120998160]C\t22\tPASS\tEVDNC=ASSMB;HOMSEQ=CCTTTCCCATTCTT;MAPQ=60;MATEID=363470:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_120981001_121006001_34C;SPAN=311;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:14:12.5:22.4,0,12.5:8:0:-22.62:22.62\n6\t121472042\t363657:1\tA\t]6:121472146]A\t49\tPASS\tEVDNC=ASSMB;INSERTION=C;MAPQ=60;MATEID=363657:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_121471001_121496001_6C;SPAN=104;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:18:36:39.5:49.4,0,39.5:18:0:-49.34:49.34\n6\t121472146\t363657:2\tC\tC[6:121472042[\t49\tPASS\tEVDNC=ASSMB;INSERTION=C;MAPQ=60;MATEID=363657:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_121471001_121496001_6C;SPAN=104;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:18:36:39.5:49.4,0,39.5:18:0:-49.34:49.34\n6\t121486357\t363669:1\tC\tC[6:121486645[\t14\tPASS\tEVDNC=ASSMB;HOMSEQ=GATCTCGGCTCACTGCAGCCTC;MAPQ=60;MATEID=363669:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_6_121471001_121496001_57C;SPAN=288;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:7:29:14.9:14.9,0,57.8:7:0:-14.96:16.39\n6\t121486645\t363669:2\tG\t]6:121486357]G\t14\tPASS\tEVDNC=ASSMB;HOMSEQ=GATCTCGGCTCACTGCAGCCTC;MAPQ=60;MATEID=363669:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_6_121471001_121496001_57C;SPAN=288;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:7:29:14.9:14.9,0,57.8:7:0:-14.96:16.39\n6\t122378179\t363918:1\tC\t]6:122587980]C\t22\tPASS\tDISC_MAPQ=46;EVDNC=DSCRD;IMPRECISE;MAPQ=46;MATEID=363918:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:122378179(-)-6:122587980(+)__6_122377501_122402501D;SPAN=209801;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:16:15.5:22.1,0,15.5:0:8:-21.93:21.93\n6\t122587980\t363918:2\tT\tT[6:122378179[\t22\tPASS\tDISC_MAPQ=30;EVDNC=DSCRD;IMPRECISE;MAPQ=30;MATEID=363918:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:122378179(-)-6:122587980(+)__6_122377501_122402501D;SPAN=209801;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:16:15.5:22.1,0,15.5:0:8:-21.93:21.93\n6\t122850286\t737285:1\tG\tG[15:70547227[\t99\tPASS\tDISC_MAPQ=29;EVDNC=ASDIS;INSERTION=C;MAPQ=0;MATEID=737285:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_15_70535501_70560501_58C;SPAN=-1;SUBN=9;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:50:22:13.8:151.8,13.8,0:38:23:-151.8:151.8\n6\t124177144\t364451:1\tA\tA[6:124177531[\t22\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=364451:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_124166001_124191001_48C;SPAN=387;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:27:22.1:22.1,0,45.2:9:0:-22.12:22.58\n6\t124177531\t364451:2\tT\t]6:124177144]T\t22\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=364451:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_124166001_124191001_48C;SPAN=387;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:27:22.1:22.1,0,45.2:9:0:-22.12:22.58\n6\t125861963\t364956:1\tG\tG[6:125866159[\t56\tPASS\tDISC_MAPQ=57;EVDNC=DSCRD;IMPRECISE;MAPQ=57;MATEID=364956:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:125861963(+)-6:125866159(-)__6_125856501_125881501D;SPAN=4196;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:19:8:5.1:56.1,5.1,0:0:19:-56.11:56.11\n6\t125866159\t364956:2\tG\t]6:125861963]G\t56\tPASS\tDISC_MAPQ=55;EVDNC=DSCRD;IMPRECISE;MAPQ=55;MATEID=364956:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:125861963(+)-6:125866159(-)__6_125856501_125881501D;SPAN=4196;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:19:8:5.1:56.1,5.1,0:0:19:-56.11:56.11\n6\t126917735\t365070:1\tG\tG[6:126919915[\t38\tPASS\tEVDNC=ASSMB;HOMSEQ=G;MAPQ=60;MATEID=365070:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_126910001_126935001_16C;SPAN=2180;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:28:31.7:38.3,0,31.7:14:0:-38.37:38.37\n6\t126919915\t365070:2\tG\t]6:126917735]G\t38\tPASS\tEVDNC=ASSMB;HOMSEQ=G;MAPQ=60;MATEID=365070:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_126910001_126935001_16C;SPAN=2180;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:28:31.7:38.3,0,31.7:14:0:-38.37:38.37\n6\t128054467\t365326:1\tA\t]6:128144890]A\t36\tPASS\tEVDNC=ASSMB;INSERTION=ATTTATAATTATAAATTATAAATTTATAATTTATAATTT;MAPQ=60;MATEID=365326:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_6_128135001_128160001_15C;SPAN=90423;SUBN=7;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:24:23:36.2,0,23:13:0:-36.29:36.29\n6\t128144890\t365326:2\tT\tT[6:128054467[\t36\tPASS\tEVDNC=ASSMB;INSERTION=ATTTATAATTATAAATTATAAATTTATAATTTATAATTT;MAPQ=60;MATEID=365326:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_6_128135001_128160001_15C;SPAN=90423;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:24:23:36.2,0,23:13:0:-36.29:36.29\n6\t130638263\t366051:1\tT\tT[6:130638570[\t72\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=CCCCAAAACTTCTT;MAPQ=60;MATEID=366051:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_130634001_130659001_8C;SPAN=307;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:24:15:6.6:72.6,6.6,0:18:6:-72.62:72.62\n6\t130638570\t366051:2\tC\t]6:130638263]C\t72\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=CCCCAAAACTTCTT;MAPQ=60;MATEID=366051:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_130634001_130659001_8C;SPAN=307;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:24:15:6.6:72.6,6.6,0:18:6:-72.62:72.62\n6\t133020695\t366763:1\tT\tT[6:133026747[\t65\tPASS\tEVDNC=ASSMB;HOMSEQ=AGGTGTGATGTTTT;MAPQ=60;MATEID=366763:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_133010501_133035501_54C;SPAN=6052;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:23:38:29:65.3,0,29:23:0:-65.93:65.93\n6\t133026747\t366763:2\tA\t]6:133020695]A\t65\tPASS\tEVDNC=ASSMB;HOMSEQ=AGGTGTGATGTTTT;MAPQ=60;MATEID=366763:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_133010501_133035501_54C;SPAN=6052;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:23:38:29:65.3,0,29:23:0:-65.93:65.93\n6\t133050362\t366771:1\tT\tT[6:133050693[\t10\tPASS\tEVDNC=ASSMB;HOMSEQ=GCCAATTTTTCTTT;MAPQ=60;MATEID=366771:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_133035001_133060001_2C;SPAN=331;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:69:10.4:10.4,0,162.2:9:0:-10.31:18.4\n6\t133050693\t366771:2\tG\t]6:133050362]G\t10\tPASS\tEVDNC=ASSMB;HOMSEQ=GCCAATTTTTCTTT;MAPQ=60;MATEID=366771:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_133035001_133060001_2C;SPAN=331;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:69:10.4:10.4,0,162.2:9:0:-10.31:18.4\n6\t133947842\t366979:1\tG\tG[6:133948587[\t37\tPASS\tEVDNC=ASSMB;HOMSEQ=AGAG;MAPQ=60;MATEID=366979:2;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_6_133941501_133966501_10C;SPAN=745;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:33:37.1:37.1,0,43.7:14:0:-36.94:36.99\n6\t133948587\t366979:2\tA\t]6:133947842]A\t37\tPASS\tEVDNC=ASSMB;HOMSEQ=AGAG;MAPQ=60;MATEID=366979:1;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_6_133941501_133966501_10C;SPAN=745;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:33:37.1:37.1,0,43.7:14:0:-36.94:36.99\n6\t135509695\t367689:1\tG\t[6:136518755[G\t36\tPASS\tDISC_MAPQ=45;EVDNC=ASDIS;INSERTION=TTGTGTGGTGCA;MAPQ=60;MATEID=367689:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_136514001_136539001_14C;SPAN=1009060;SUBN=4;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:24:23:36.2,0,23:9:4:-36.29:36.29\n6\t136518755\t367689:2\tA\t[6:135509695[A\t36\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;INSERTION=TTGTGTGGTGCA;MAPQ=60;MATEID=367689:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_136514001_136539001_14C;SPAN=1009060;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:24:23:36.2,0,23:9:4:-36.29:36.29\n6\t136992557\t367825:1\tT\tT[6:136993050[\t99\tPASS\tEVDNC=ASSMB;HOMSEQ=T;MAPQ=60;MATEID=367825:2;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_6_136979501_137004501_57C;SPAN=493;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:34:18:9.3:102.3,9.3,0:34:0:-102.3:102.3\n6\t136993050\t367825:2\tT\t]6:136992557]T\t99\tPASS\tEVDNC=ASSMB;HOMSEQ=T;MAPQ=60;MATEID=367825:1;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_6_136979501_137004501_57C;SPAN=493;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:34:18:9.3:102.3,9.3,0:34:0:-102.3:102.3\n6\t138626611\t368262:1\tA\tA[6:138626919[\t35\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AAAAAAAATTGTA;MAPQ=60;MATEID=368262:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_138621001_138646001_87C;SPAN=308;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:27:32:35.3,0,32:11:5:-35.33:35.33\n6\t138626919\t368262:2\tA\t]6:138626611]A\t35\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AAAAAAAATTGTA;MAPQ=60;MATEID=368262:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_138621001_138646001_87C;SPAN=308;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:27:32:35.3,0,32:11:5:-35.33:35.33\n6\t139281458\t368489:1\tT\tT[6:139285973[\t36\tPASS\tDISC_MAPQ=59;EVDNC=DSCRD;IMPRECISE;MAPQ=59;MATEID=368489:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:139281458(+)-6:139285973(-)__6_139282501_139307501D;SPAN=4515;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:12:9:3.3:36.3,3.3,0:0:12:-36.31:36.31\n6\t139285973\t368489:2\tC\t]6:139281458]C\t36\tPASS\tDISC_MAPQ=49;EVDNC=DSCRD;IMPRECISE;MAPQ=49;MATEID=368489:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:139281458(+)-6:139285973(-)__6_139282501_139307501D;SPAN=4515;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:12:9:3.3:36.3,3.3,0:0:12:-36.31:36.31\n6\t141227487\t369042:1\tC\tC[6:141228894[\t20\tPASS\tEVDNC=ASSMB;INSERTION=TG;MAPQ=60;MATEID=369042:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_141218001_141243001_41C;SPAN=1407;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:32:20.9:20.9,0,57.2:9:0:-20.71:21.77\n6\t141228894\t369042:2\tT\t]6:141227487]T\t20\tPASS\tEVDNC=ASSMB;INSERTION=TG;MAPQ=60;MATEID=369042:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_141218001_141243001_41C;SPAN=1407;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:32:20.9:20.9,0,57.2:9:0:-20.71:21.77\n6\t144317788\t369819:1\tA\t]6:144336154]A\t27\tPASS\tEVDNC=ASSMB;INSERTION=AA;MAPQ=60;MATEID=369819:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_144329501_144354501_32C;SPAN=18366;SUBN=2;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:21:23.9:27.2,0,23.9:10:0:-27.11:27.11\n6\t144336154\t369819:2\tC\tC[6:144317788[\t27\tPASS\tEVDNC=ASSMB;INSERTION=AA;MAPQ=60;MATEID=369819:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_144329501_144354501_32C;SPAN=18366;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:21:23.9:27.2,0,23.9:10:0:-27.11:27.11\n6\t147050431\t842826:1\tC\t[19:13737615[C\t99\tPASS\tDISC_MAPQ=15;EVDNC=ASDIS;HOMSEQ=CCTGGCTAATTTTTGTATTTTTAGTAGAGA;INSERTION=AAGCCACCGTGTCCCGCCAGCATCCACCTGC;MAPQ=56;MATEID=842826:2;MATENM=0;NM=1;NUMPARTS=3;SCTG=c_19_13720001_13745001_137C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:38:14:10.5:115.5,10.5,0:37:7:-115.5:115.5\n6\t148915835\t370577:1\tA\t]6:148915968]A\t39\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=370577:2;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_6_148911001_148936001_6C;SPAN=133;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:24:19.7:39.5,0,19.7:14:0:-39.77:39.77\n6\t148915968\t370577:2\tA\tA[6:148915835[\t39\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=370577:1;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_6_148911001_148936001_6C;SPAN=133;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:24:19.7:39.5,0,19.7:14:0:-39.77:39.77\n6\t151416863\t371503:1\tG\t]6:152402215]G\t36\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=G;MAPQ=60;MATEID=371503:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_152390001_152415001_1C;SPAN=985352;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:12:14:0.6:36.3,0.6,0:10:10:-38:38\n6\t151501557\t371325:1\tA\t]6:151688188]A\t30\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AACTTCA;MAPQ=60;MATEID=371325:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_151679501_151704501_5C;SPAN=186631;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:33:30.5:30.5,0,50.3:8:9:-30.34:30.67\n6\t151549893\t371281:1\tG\t]6:151588711]G\t52\tPASS\tEVDNC=ASSMB;HOMSEQ=GC;MAPQ=60;MATEID=371281:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_151581501_151606501_4C;SPAN=38818;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:19:36:36.2:52.7,0,36.2:19:0:-52.72:52.72\n6\t151563417\t371335:1\tC\t]6:151724279]C\t66\tPASS\tEVDNC=ASSMB;HOMSEQ=CTCCC;MAPQ=60;MATEID=371335:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_151704001_151729001_20C;SPAN=160862;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:21:22:6:66,6,0:21:0:-66.02:66.02\n6\t151564431\t371273:1\tG\tG[6:151716324[\t20\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=GCAGG;MAPQ=60;MATEID=371273:2;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_6_151557001_151582001_15C;SPAN=151893;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:45:20.3:20.3,0,92.9:6:7:-20.36:23\n6\t151588711\t371281:2\tC\tC[6:151549893[\t52\tPASS\tEVDNC=ASSMB;HOMSEQ=GC;MAPQ=60;MATEID=371281:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_151581501_151606501_4C;SPAN=38818;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:19:36:36.2:52.7,0,36.2:19:0:-52.72:52.72\n6\t151688188\t371325:2\tA\tA[6:151501557[\t30\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AACTTCA;MAPQ=60;MATEID=371325:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_151679501_151704501_5C;SPAN=186631;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:33:30.5:30.5,0,50.3:8:9:-30.34:30.67\n6\t151716324\t371273:2\tG\t]6:151564431]G\t20\tPASS\tDISC_MAPQ=255;EVDNC=ASDIS;HOMSEQ=GCAGG;MAPQ=60;MATEID=371273:1;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_6_151557001_151582001_15C;SPAN=151893;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:45:20.3:20.3,0,92.9:6:7:-20.36:23\n6\t151724279\t371335:2\tC\tC[6:151563417[\t66\tPASS\tEVDNC=ASSMB;HOMSEQ=CTCCC;MAPQ=60;MATEID=371335:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_151704001_151729001_20C;SPAN=160862;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:21:22:6:66,6,0:21:0:-66.02:66.02\n6\t152402215\t371503:2\tG\tG[6:151416863[\t36\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=G;MAPQ=60;MATEID=371503:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_152390001_152415001_1C;SPAN=985352;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:12:14:0.6:36.3,0.6,0:10:10:-38:38\n6\t153202067\t371709:2\tG\t]3:177126512]G\t69\tPASS\tDISC_MAPQ=255;EVDNC=TSI_L;HOMSEQ=ATC;INSERTION=T;MAPQ=60;MATEID=371709:1;MATENM=0;NM=1;NUMPARTS=3;SCTG=c_6_153198501_153223501_16C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:23:18:6.3:69.3,6.3,0:23:0:-69.32:69.32\n6\t153202080\t371714:1\tG\tG]6:153202289]\t72\tPASS\tDISC_MAPQ=255;EVDNC=TSI_L;INSERTION=T;MAPQ=60;MATEID=371714:2;MATENM=1;NM=8;NUMPARTS=3;SCTG=c_6_153198501_153223501_16C;SPAN=209;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:23:24:6.6:72.6,6.6,0:23:0:-72.62:72.62\n6\t153202289\t371714:2\tT\tT]6:153202080]\t72\tPASS\tDISC_MAPQ=255;EVDNC=TSI_L;INSERTION=T;MAPQ=60;MATEID=371714:1;MATENM=8;NM=1;NUMPARTS=3;SCTG=c_6_153198501_153223501_16C;SPAN=209;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:23:24:6.6:72.6,6.6,0:23:0:-72.62:72.62\n6\t153202309\t371708:2\tT\t]3:177122919]T\t92\tPASS\tDISC_MAPQ=58;EVDNC=DSCRD;IMPRECISE;MAPQ=58;MATEID=371708:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=3:177122919(+)-6:153202309(-)__6_153198501_153223501D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:31:6:8.4:92.4,8.4,0:0:31:-92.42:92.42\n6\t153224432\t371723:1\tC\t]6:153230983]C\t29\tPASS\tDISC_MAPQ=51;EVDNC=ASDIS;MAPQ=60;MATEID=371723:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_153223001_153248001_26C;SPAN=6551;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:24:29.6:29.6,0,29.6:5:8:-29.57:29.57\n6\t153230983\t371723:2\tT\tT[6:153224432[\t29\tPASS\tDISC_MAPQ=55;EVDNC=ASDIS;MAPQ=60;MATEID=371723:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_153223001_153248001_26C;SPAN=6551;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:24:29.6:29.6,0,29.6:5:8:-29.57:29.57\n6\t154142158\t371950:1\tT\t[6:154142366[T\t22\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=371950:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:154142158(-)-6:154142366(-)__6_154129501_154154501D;SPAN=208;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:16:15.5:22.1,0,15.5:0:8:-21.93:21.93\n6\t154142366\t371950:2\tA\t[6:154142158[A\t22\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=371950:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:154142158(-)-6:154142366(-)__6_154129501_154154501D;SPAN=208;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:16:15.5:22.1,0,15.5:0:8:-21.93:21.93\n6\t155599677\t372340:1\tG\t]6:155680578]G\t66\tPASS\tEVDNC=ASSMB;HOMSEQ=GT;MAPQ=60;MATEID=372340:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_6_155673001_155698001_4C;SPAN=80901;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:22:15:6:66,6,0:22:0:-66.02:66.02\n6\t155680578\t372340:2\tT\tT[6:155599677[\t66\tPASS\tEVDNC=ASSMB;HOMSEQ=GT;MAPQ=60;MATEID=372340:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_6_155673001_155698001_4C;SPAN=80901;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:22:15:6:66,6,0:22:0:-66.02:66.02\n6\t157310372\t372674:1\tG\t]6:157313583]G\t52\tPASS\tDISC_MAPQ=255;EVDNC=TSI_L;HOMSEQ=TCATAGTGCCCCAGTGT;INSERTION=A;MAPQ=11;MATEID=372674:2;MATENM=2;NM=5;NUMPARTS=4;SCTG=c_6_157290001_157315001_28C;SPAN=3211;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:21:59:52.7:52.7,0,95.6:19:2:-52.74:53.42\n6\t157312929\t372795:1\tA\t]6:157313583]A\t24\tPASS\tDISC_MAPQ=0;EVDNC=TSI_L;HOMSEQ=TCATCATAGTGCCCCAGTGTTCGCTCACCTGGCCTCATCATAGTGTCCCAGATTGCACTCAACTGGCCTCATCATAGTGACCCAGTGGGCGCTCACCCGGCATCACCATAGTGTCCCAGTGTGCGCTTACCCGGCCTCATCACAGTGCCCCAGTGTGCGCTCACCCGGCCTCATCATAGTGCCTCAGTGTGCTCTCGCCTAGCCTCATCATAGTGTCCCAGTG;INSERTION=ATTGCACTCAACTGGCCTCATCATAGTGACCCAGTGGGCGCTCACCCGGCATCACCATAGTGTCCCAGTGTGCGCTTACCCGGCCTCATCAC;MAPQ=60;MATEID=372795:2;MATENM=1;NM=2;NUMPARTS=3;SCTG=c_6_157290001_157315001_127C;SPAN=654;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:21:161:24.1:24.1,0,380.6:19:2:-24.07:42.94\n6\t157313583\t372795:2\tG\tG[6:157312929[\t24\tPASS\tDISC_MAPQ=0;EVDNC=TSI_L;HOMSEQ=TCATCATAGTGCCCCAGTGTTCGCTCACCTGGCCTCATCATAGTGTCCCAGATTGCACTCAACTGGCCTCATCATAGTGACCCAGTGGGCGCTCACCCGGCATCACCATAGTGTCCCAGTGTGCGCTTACCCGGCCTCATCACAGTGCCCCAGTGTGCGCTCACCCGGCCTCATCATAGTGCCTCAGTGTGCTCTCGCCTAGCCTCATCATAGTGTCCCAGTG;INSERTION=ATTGCACTCAACTGGCCTCATCATAGTGACCCAGTGGGCGCTCACCCGGCATCACCATAGTGTCCCAGTGTGCGCTTACCCGGCCTCATCAC;MAPQ=60;MATEID=372795:1;MATENM=2;NM=1;NUMPARTS=3;SCTG=c_6_157290001_157315001_127C;SPAN=654;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:21:161:24.1:24.1,0,380.6:19:2:-24.07:42.94\n6\t157313583\t372674:2\tG\tG[6:157310372[\t52\tPASS\tDISC_MAPQ=0;EVDNC=TSI_L;HOMSEQ=TCATAGTGCCCCAGTGT;INSERTION=A;MAPQ=46;MATEID=372674:1;MATENM=5;NM=2;NUMPARTS=4;SCTG=c_6_157290001_157315001_28C;SPAN=3211;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:21:59:52.7:52.7,0,95.6:19:2:-52.74:53.42\n6\t158127250\t373083:1\tC\tC[6:158128035[\t70\tPASS\tEVDNC=ASSMB;HOMSEQ=GAAAAATGAACATATC;MAPQ=60;MATEID=373083:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_6_158123001_158148001_9C;SPAN=785;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:24:30:4.7:70.7,0,4.7:24:0:-74.22:74.22\n6\t158128035\t373083:2\tG\t]6:158127250]G\t70\tPASS\tEVDNC=ASSMB;HOMSEQ=GAAAAATGAACATATC;MAPQ=60;MATEID=373083:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_6_158123001_158148001_9C;SPAN=785;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:24:30:4.7:70.7,0,4.7:24:0:-74.22:74.22\n6\t161982335\t374113:1\tT\tT[6:161983920[\t52\tPASS\tDISC_MAPQ=56;EVDNC=DSCRD;IMPRECISE;MAPQ=56;MATEID=374113:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:161982335(+)-6:161983920(-)__6_161969501_161994501D;SPAN=1585;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:18:10:4.8:52.8,4.8,0:0:18:-52.81:52.81\n6\t161983920\t374113:2\tA\t]6:161982335]A\t52\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=374113:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:161982335(+)-6:161983920(-)__6_161969501_161994501D;SPAN=1585;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:18:10:4.8:52.8,4.8,0:0:18:-52.81:52.81\n6\t162219796\t374192:1\tA\t]6:162229285]A\t18\tPASS\tEVDNC=ASSMB;HOMSEQ=AT;MAPQ=60;MATEID=374192:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_162214501_162239501_8C;SPAN=9489;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:27:18.8:18.8,0,48.5:8:0:-18.82:19.57\n6\t162229285\t374192:2\tT\tT[6:162219796[\t18\tPASS\tEVDNC=ASSMB;HOMSEQ=AT;MAPQ=60;MATEID=374192:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_162214501_162239501_8C;SPAN=9489;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:27:18.8:18.8,0,48.5:8:0:-18.82:19.57\n6\t162379810\t374213:1\tA\tA[6:162380510[\t22\tPASS\tEVDNC=ASSMB;INSERTION=ATATGTGTGTA;MAPQ=60;MATEID=374213:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_162361501_162386501_24C;SPAN=700;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:13:9.5:22.7,0,9.5:8:0:-23.02:23.02\n6\t162380510\t374213:2\tT\t]6:162379810]T\t22\tPASS\tEVDNC=ASSMB;INSERTION=ATATGTGTGTA;MAPQ=60;MATEID=374213:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_162361501_162386501_24C;SPAN=700;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:13:9.5:22.7,0,9.5:8:0:-23.02:23.02\n6\t163482678\t742255:1\tA\t]15:86013468]A\t23\tPASS\tDISC_MAPQ=25;EVDNC=DSCRD;IMPRECISE;MAPQ=25;MATEID=742255:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:163482678(-)-15:86013468(+)__15_85995001_86020001D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:10:0.5:23.6,0,0.5:0:8:-24.74:24.74\n6\t167074701\t375348:1\tG\tG[6:167076088[\t39\tPASS\tDISC_MAPQ=58;EVDNC=DSCRD;IMPRECISE;MAPQ=58;MATEID=375348:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:167074701(+)-6:167076088(-)__6_167065501_167090501D;SPAN=1387;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:13:4:3.6:39.6,3.6,0:0:13:-39.61:39.61\n6\t167076088\t375348:2\tT\t]6:167074701]T\t39\tPASS\tDISC_MAPQ=57;EVDNC=DSCRD;IMPRECISE;MAPQ=57;MATEID=375348:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:167074701(+)-6:167076088(-)__6_167065501_167090501D;SPAN=1387;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:13:4:3.6:39.6,3.6,0:0:13:-39.61:39.61\n6\t167223020\t375377:1\tT\t[6:167284198[T\t29\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=375377:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:167223020(-)-6:167284198(-)__6_167212501_167237501D;SPAN=61178;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:10:4:2.7:29.7,2.7,0:0:10:-29.71:29.71\n6\t167284198\t375377:2\tC\t[6:167223020[C\t29\tPASS\tDISC_MAPQ=56;EVDNC=DSCRD;IMPRECISE;MAPQ=56;MATEID=375377:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:167223020(-)-6:167284198(-)__6_167212501_167237501D;SPAN=61178;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:10:4:2.7:29.7,2.7,0:0:10:-29.71:29.71\n6\t167651416\t375568:1\tT\t]6:167652053]T\t46\tPASS\tDISC_MAPQ=36;EVDNC=DSCRD;IMPRECISE;MAPQ=36;MATEID=375568:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:167651416(-)-6:167652053(+)__6_167629001_167654001D;SPAN=637;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:14:15:4.2:46.2,4.2,0:0:14:-46.19:46.19\n6\t167652053\t375568:2\tG\tG[6:167651416[\t46\tPASS\tDISC_MAPQ=50;EVDNC=DSCRD;IMPRECISE;MAPQ=50;MATEID=375568:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:167651416(-)-6:167652053(+)__6_167629001_167654001D;SPAN=637;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:14:15:4.2:46.2,4.2,0:0:14:-46.19:46.19\n6\t168659522\t375788:1\tT\t]6:168660106]T\t20\tPASS\tDISC_MAPQ=32;EVDNC=DSCRD;IMPRECISE;MAPQ=32;MATEID=375788:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:168659522(-)-6:168660106(+)__6_168658001_168683001D;SPAN=584;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:22:20.3:20.3,0,33.5:0:8:-20.22:20.45\n6\t168660106\t375788:2\tG\tG[6:168659522[\t20\tPASS\tDISC_MAPQ=47;EVDNC=DSCRD;IMPRECISE;MAPQ=47;MATEID=375788:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:168659522(-)-6:168660106(+)__6_168658001_168683001D;SPAN=584;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:22:20.3:20.3,0,33.5:0:8:-20.22:20.45\n6\t169996908\t904003:1\tT\t[21:38913836[T\t99\tPASS\tDISC_MAPQ=42;EVDNC=DSCRD;IMPRECISE;MAPQ=50;MATEID=904003:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_21_38906001_38931001_16C;SPAN=-1;SUBN=6;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:66:51:18.3:201.3,18.3,0:61:10:-201.3:201.3\n6\t170452835\t983884:1\tG\t]6:170453005]G\t23\tPASS\tDISC_MAPQ=255;EVDNC=TSI_L;HOMSEQ=GTGTTAGTGTGAGTGTATGTGGGAGTGAG;MAPQ=60;MATEID=983884:2;MATENM=6;NM=5;NUMPARTS=3;SCTG=c_257_171501_196501_22C;SPAN=170;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:8:0:2.1:23.1,2.1,0:8:0:-23.11:23.11\n6\t170453005\t983884:2\tG\tG[6:170452835[\t23\tPASS\tDISC_MAPQ=255;EVDNC=TSI_L;HOMSEQ=GTGTTAGTGTGAGTGTATGTGGGAGTGAG;MAPQ=60;MATEID=983884:1;MATENM=5;NM=6;NUMPARTS=3;SCTG=c_257_171501_196501_22C;SPAN=170;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:8:0:2.1:23.1,2.1,0:8:0:-23.11:23.11\n7\t237846\t376498:1\tG\tG[7:240253[\t99\tPASS\tDISC_MAPQ=55;EVDNC=ASDIS;INSERTION=ATGGTGGTGGAGGTGATGA;MAPQ=60;MATEID=376498:2;MATENM=1;NM=4;NUMPARTS=3;SCTG=c_7_220501_245501_24C;SPAN=2407;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:47:135:99:117.2,0,222.8:36:13:-117.2:119\n7\t240253\t376498:2\tT\t]7:237846]T\t99\tPASS\tDISC_MAPQ=21;EVDNC=ASDIS;INSERTION=ATGGTGGTGGAGGTGATGA;MAPQ=54;MATEID=376498:1;MATENM=4;NM=1;NUMPARTS=3;SCTG=c_7_220501_245501_24C;SPAN=2407;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:47:135:99:117.2,0,222.8:36:13:-117.2:119\n7\t357206\t376618:1\tG\t]7:357333]G\t88\tPASS\tEVDNC=ASSMB;MAPQ=24;MATEID=376618:2;MATENM=6;NM=1;NUMPARTS=2;SCTG=c_7_343001_368001_58C;SPAN=127;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:32:62:65.3:88.4,0,65.3:32:0:-88.34:88.34\n7\t357333\t376618:2\tG\tG[7:357206[\t88\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=376618:1;MATENM=1;NM=6;NUMPARTS=2;SCTG=c_7_343001_368001_58C;SPAN=127;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:32:62:65.3:88.4,0,65.3:32:0:-88.34:88.34\n7\t566403\t376725:1\tT\t]7:566782]T\t17\tPASS\tDISC_MAPQ=19;EVDNC=DSCRD;IMPRECISE;MAPQ=19;MATEID=376725:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:566403(-)-7:566782(+)__7_563501_588501D;SPAN=379;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:32:17.6:17.6,0,60.5:0:8:-17.41:18.87\n7\t566782\t376725:2\tT\tT[7:566403[\t17\tPASS\tDISC_MAPQ=53;EVDNC=DSCRD;IMPRECISE;MAPQ=53;MATEID=376725:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:566403(-)-7:566782(+)__7_563501_588501D;SPAN=379;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:32:17.6:17.6,0,60.5:0:8:-17.41:18.87\n7\t1517281\t377054:1\tG\t]7:1517474]G\t39\tPASS\tEVDNC=ASSMB;HOMSEQ=GAATC;MAPQ=60;MATEID=377054:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_7_1494501_1519501_29C;SPAN=193;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:15:37:39.2:39.2,0,52.4:15:0:-39.11:39.25\n7\t1517474\t377054:2\tC\tC[7:1517281[\t39\tPASS\tEVDNC=ASSMB;HOMSEQ=GAATC;MAPQ=60;MATEID=377054:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_7_1494501_1519501_29C;SPAN=193;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:15:37:39.2:39.2,0,52.4:15:0:-39.11:39.25\n7\t1876939\t914635:1\tC\t[22:23429471[C\t26\tPASS\tDISC_MAPQ=49;EVDNC=DSCRD;IMPRECISE;MAPQ=49;MATEID=914635:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:1876939(-)-22:23429471(-)__22_23422001_23447001D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:23:26.6:26.6,0,29.9:0:10:-26.55:26.57\n7\t2308151\t377359:1\tA\t]7:2414980]A\t41\tPASS\tDISC_MAPQ=57;EVDNC=ASDIS;HOMSEQ=AGA;MAPQ=60;MATEID=377359:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_2401001_2426001_1C;SPAN=106829;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:15:27:25.4:41.9,0,25.4:12:11:-42.12:42.12\n7\t2414980\t377359:2\tA\tA[7:2308151[\t41\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AGA;MAPQ=60;MATEID=377359:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_2401001_2426001_1C;SPAN=106829;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:15:27:25.4:41.9,0,25.4:12:11:-42.12:42.12\n7\t4984059\t378369:1\tA\t[7:5730535[A\t17\tPASS\tDISC_MAPQ=54;EVDNC=DSCRD;IMPRECISE;MAPQ=54;MATEID=378369:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:4984059(-)-7:5730535(-)__7_5708501_5733501D;SPAN=746476;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:31:17.9:17.9,0,57.5:0:8:-17.69:19\n7\t5730535\t378369:2\tG\t[7:4984059[G\t17\tPASS\tDISC_MAPQ=32;EVDNC=DSCRD;IMPRECISE;MAPQ=32;MATEID=378369:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:4984059(-)-7:5730535(-)__7_5708501_5733501D;SPAN=746476;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:31:17.9:17.9,0,57.5:0:8:-17.69:19\n7\t5791828\t378412:1\tG\tG[19:8473352[\t29\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TCGGGAGGCTGAGGCAG;MAPQ=60;MATEID=378412:2;MATENM=2;NM=8;NUMPARTS=2;SCTG=c_7_5782001_5807001_18C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:10:7:2.7:29.7,2.7,0:10:5:-29.71:29.71\n7\t6923050\t378752:2\tG\tG[3:75414274[\t30\tPASS\tDISC_MAPQ=34;EVDNC=DSCRD;IMPRECISE;MAPQ=34;MATEID=378752:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=3:75414274(-)-7:6923050(+)__7_6909001_6934001D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:20:17.6:30.8,0,17.6:0:11:-30.82:30.82\n7\t8152563\t379134:1\tC\t]7:8152858]C\t8\tPASS\tDISC_MAPQ=28;EVDNC=TSI_L;HOMSEQ=CC;MAPQ=10;MATEID=379134:2;MATENM=10;NM=2;NUMPARTS=3;REPSEQ=CACCACCACCAC;SCTG=c_7_8134001_8159001_12C;SPAN=295;SUBN=3;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:36:8.5:8.5,0,18.2:7:6:-8.054:8.563\n7\t8152858\t379134:2\tC\tC[7:8152563[\t8\tPASS\tDISC_MAPQ=36;EVDNC=TSI_L;HOMSEQ=CC;MAPQ=18;MATEID=379134:1;MATENM=2;NM=10;NUMPARTS=3;REPSEQ=CACCACCACCAC;SCTG=c_7_8134001_8159001_12C;SPAN=295;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:36:8.5:8.5,0,18.2:7:6:-8.054:8.563\n7\t9051328\t379360:1\tA\t]Un_KN707939v1_decoy:5600]A\t99\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=379360:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_9040501_9065501_1C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:34:22:9.3:102.3,9.3,0:34:0:-102.3:102.3\n7\t9595130\t379530:1\tT\tT[7:9596347[\t99\tPASS\tDISC_MAPQ=59;EVDNC=DSCRD;IMPRECISE;MAPQ=59;MATEID=379530:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:9595130(+)-7:9596347(-)__7_9579501_9604501D;SPAN=1217;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:38:9:10.5:115.5,10.5,0:0:38:-115.5:115.5\n7\t9596347\t379530:2\tA\t]7:9595130]A\t99\tPASS\tDISC_MAPQ=58;EVDNC=DSCRD;IMPRECISE;MAPQ=58;MATEID=379530:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:9595130(+)-7:9596347(-)__7_9579501_9604501D;SPAN=1217;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:38:9:10.5:115.5,10.5,0:0:38:-115.5:115.5\n7\t14027456\t380736:1\tT\tT[7:14027663[\t17\tPASS\tEVDNC=ASSMB;INSERTION=AT;MAPQ=60;MATEID=380736:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_14014001_14039001_10C;SPAN=207;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:32:17.6:17.6,0,60.5:8:0:-17.41:18.87\n7\t14027663\t380736:2\tT\t]7:14027456]T\t17\tPASS\tEVDNC=ASSMB;INSERTION=AT;MAPQ=60;MATEID=380736:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_14014001_14039001_10C;SPAN=207;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:32:17.6:17.6,0,60.5:8:0:-17.41:18.87\n7\t14211423\t380770:1\tG\tG[7:14212338[\t89\tPASS\tDISC_MAPQ=52;EVDNC=ASDIS;HOMSEQ=TGTGATATTTACTCTCATGTTTTGTGATTTTACTCTCATGTTTTGTGATATTTACTCTCATGTTTTGTGATATTTACTCTCATGTTTTGTG;MAPQ=60;MATEID=380770:2;MATENM=5;NM=21;NUMPARTS=2;SCTG=c_7_14210001_14235001_11C;SPAN=915;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:29:2:8.1:89.1,8.1,0:13:18:-89.12:89.12\n7\t14212338\t380770:2\tT\t]7:14211423]T\t89\tPASS\tDISC_MAPQ=56;EVDNC=ASDIS;HOMSEQ=TGTGATATTTACTCTCATGTTTTGTGATTTTACTCTCATGTTTTGTGATATTTACTCTCATGTTTTGTGATATTTACTCTCATGTTTTGTG;MAPQ=60;MATEID=380770:1;MATENM=21;NM=5;NUMPARTS=2;SCTG=c_7_14210001_14235001_11C;SPAN=915;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:29:2:8.1:89.1,8.1,0:13:18:-89.12:89.12\n7\t15184371\t381082:1\tG\t]7:15184539]G\t14\tPASS\tEVDNC=ASSMB;HOMSEQ=GGAAGGAAGGGAGG;MAPQ=60;MATEID=381082:2;MATENM=0;NM=6;NUMPARTS=2;SCTG=c_7_15165501_15190501_14C;SPAN=168;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:6:20:14.3:14.3,0,34.1:6:0:-14.18:14.72\n7\t15184539\t381082:2\tG\tG[7:15184371[\t14\tPASS\tEVDNC=ASSMB;HOMSEQ=GGAAGGAAGGGAGG;MAPQ=60;MATEID=381082:1;MATENM=6;NM=0;NUMPARTS=2;SCTG=c_7_15165501_15190501_14C;SPAN=168;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:6:20:14.3:14.3,0,34.1:6:0:-14.18:14.72\n7\t15423545\t381167:1\tT\t]7:15423669]T\t92\tPASS\tEVDNC=ASSMB;INSERTION=TAACACGGTA;MAPQ=60;MATEID=381167:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_15410501_15435501_9C;SPAN=124;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:34:71:85.7:92.3,0,85.7:34:0:-92.29:92.29\n7\t15423669\t381167:2\tT\tT[7:15423545[\t92\tPASS\tEVDNC=ASSMB;INSERTION=TAACACGGTA;MAPQ=60;MATEID=381167:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_15410501_15435501_9C;SPAN=124;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:34:71:85.7:92.3,0,85.7:34:0:-92.29:92.29\n7\t15965553\t916271:1\tT\tT[22:28669897[\t7\tPASS\tEVDNC=ASSMB;HOMSEQ=AAAT;MAPQ=60;MATEID=916271:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_22_28665001_28690001_80C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:103:7.4:7.4,0,251.6:11:0:-7.359:21.48\n7\t18905828\t382078:1\tT\t]7:18936195]T\t38\tPASS\tEVDNC=ASSMB;HOMSEQ=TA;MAPQ=60;MATEID=382078:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_7_18914001_18939001_10C;SPAN=30367;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:29:34.7:38,0,34.7:14:0:-38.07:38.07\n7\t18936195\t382078:2\tA\tA[7:18905828[\t38\tPASS\tEVDNC=ASSMB;HOMSEQ=TA;MAPQ=60;MATEID=382078:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_7_18914001_18939001_10C;SPAN=30367;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:29:34.7:38,0,34.7:14:0:-38.07:38.07\n7\t19494848\t382261:1\tC\tC[7:19495294[\t99\tPASS\tDISC_MAPQ=50;EVDNC=TSI_L;HOMSEQ=ACGTATTTACGTGTGTATACACCCAGACGTATTTACGTGTGTATACAC;INSERTION=ACACACGTATTTACATATACACATATGTGTACACACACGTACGTACACGTGCGCGCACACGTACGTACACACGTGCGCGCACACGTACGTACACACGTGCGCGTACACGTACGTACACACGTACA;MAPQ=19;MATEID=382261:2;MATENM=5;NM=0;NUMPARTS=3;REPSEQ=CACA;SCTG=c_7_19477501_19502501_10C;SPAN=446;SUBN=2;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:68:42:18.9:207.9,18.9,0:67:10:-208:208\n7\t19495294\t382261:2\tT\t]7:19494848]T\t99\tPASS\tDISC_MAPQ=60;EVDNC=TSI_L;HOMSEQ=ACGTATTTACGTGTGTATACACCCAGACGTATTTACGTGTGTATACAC;INSERTION=ACACACGTATTTACATATACACATATGTGTACACACACGTACGTACACGTGCGCGCACACGTACGTACACACGTGCGCGCACACGTACGTACACACGTGCGCGTACACGTACGTACACACGTACA;MAPQ=60;MATEID=382261:1;MATENM=0;NM=5;NUMPARTS=3;REPSEQ=CACA;SCTG=c_7_19477501_19502501_10C;SPAN=446;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:68:42:18.9:207.9,18.9,0:67:10:-208:208\n7\t20669897\t771521:1\tT\tT[16:74811117[\t26\tPASS\tDISC_MAPQ=15;EVDNC=DSCRD;IMPRECISE;MAPQ=15;MATEID=771521:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:20669897(+)-16:74811117(-)__16_74798501_74823501D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:37:26:26,0,65.6:0:11:-25.91:26.93\n7\t23776047\t383518:1\tA\t[7:23798524[A\t99\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AGAAAAAGCCTTTGATAAAATT;MAPQ=60;MATEID=383518:2;MATENM=9;NM=0;NUMPARTS=2;SCTG=c_7_23789501_23814501_18C;SPAN=22477;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:43:13:12:132,12,0:39:4:-132:132\n7\t23776228\t383519:1\tG\tG]7:23798402]\t39\tPASS\tDISC_MAPQ=52;EVDNC=DSCRD;IMPRECISE;MAPQ=52;MATEID=383519:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:23776228(+)-7:23798402(+)__7_23789501_23814501D;SPAN=22174;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:13:11:3.6:39.6,3.6,0:0:13:-39.61:39.61\n7\t23798402\t383519:2\tA\tA]7:23776228]\t39\tPASS\tDISC_MAPQ=56;EVDNC=DSCRD;IMPRECISE;MAPQ=56;MATEID=383519:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:23776228(+)-7:23798402(+)__7_23789501_23814501D;SPAN=22174;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:13:11:3.6:39.6,3.6,0:0:13:-39.61:39.61\n7\t23798524\t383518:2\tA\t[7:23776047[A\t99\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AGAAAAAGCCTTTGATAAAATT;MAPQ=60;MATEID=383518:1;MATENM=0;NM=9;NUMPARTS=2;SCTG=c_7_23789501_23814501_18C;SPAN=22477;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:43:13:12:132,12,0:39:4:-132:132\n7\t24409092\t8608:2\tT\tT[1:33050733[\t99\tPASS\tEVDNC=ASSMB;INSERTION=G;MAPQ=60;MATEID=8608:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_33050501_33075501_8C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:37:32:10.2:112.2,10.2,0:37:0:-112.2:112.2\n7\t25047891\t383809:1\tC\tC[13:60888202[\t99\tPASS\tDISC_MAPQ=6;EVDNC=ASDIS;INSERTION=TCTC;MAPQ=16;MATEID=383809:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_25039001_25064001_16C;SPAN=-1;SUBN=1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:35:24:9.6:105.6,9.6,0:27:12:-105.6:105.6\n7\t26097503\t384069:1\tC\tC[7:26105875[\t69\tPASS\tDISC_MAPQ=56;EVDNC=DSCRD;IMPRECISE;MAPQ=56;MATEID=384069:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:26097503(+)-7:26105875(-)__7_26092501_26117501D;SPAN=8372;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:23:2:6.3:69.3,6.3,0:0:23:-69.32:69.32\n7\t26105875\t384069:2\tC\t]7:26097503]C\t69\tPASS\tDISC_MAPQ=49;EVDNC=DSCRD;IMPRECISE;MAPQ=49;MATEID=384069:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:26097503(+)-7:26105875(-)__7_26092501_26117501D;SPAN=8372;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:23:2:6.3:69.3,6.3,0:0:23:-69.32:69.32\n7\t26183011\t384149:1\tT\t]7:26242794]T\t62\tPASS\tEVDNC=ASSMB;HOMSEQ=T;MAPQ=60;MATEID=384149:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_26239501_26264501_38C;SPAN=59783;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:21:17:5.7:62.7,5.7,0:21:0:-62.72:62.72\n7\t26201745\t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/1:10:45:20.3:20.3,0,92.9:10:0:-20.36:23\n7\t49485855\t404622:1\tG\tG[7:72934712[\t47\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=404622:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:49485855(+)-7:72934712(-)__7_72912001_72937001D;SPAN=23448857;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:18:44:47:47,0,63.5:0:18:-47.05:47.19\n7\t49498884\t391800:1\tG\t]7:49896199]G\t66\tPASS\tEVDNC=ASSMB;HOMSEQ=G;MAPQ=60;MATEID=391800:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_49882001_49907001_57C;SPAN=397315;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:22:22:6:66,6,0:22:0:-66.02:66.02\n7\t49512479\t391617:1\tT\tT[7:49512788[\t92\tPASS\tEVDNC=ASSMB;HOMSEQ=TCTACTGTCT;MAPQ=60;MATEID=391617:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_49490001_49515001_71C;SPAN=309;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:31:29:8.4:92.4,8.4,0:31:0:-92.42:92.42\n7\t49512788\t391617:2\tT\t]7:49512479]T\t92\tPASS\tEVDNC=ASSMB;HOMSEQ=TCTACTGTCT;MAPQ=60;MATEID=391617:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_49490001_49515001_71C;SPAN=309;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:31:29:8.4:92.4,8.4,0:31:0:-92.42:92.42\n7\t49562762\t391670:1\tT\t]7:49655378]T\t27\tPASS\tDISC_MAPQ=30;EVDNC=ASDIS;MAPQ=60;MATEID=391670:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_49539001_49564001_202C;SPAN=92616;SUBN=10;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:42:27.8:27.8,0,77.3:10:8:-27.81:29.13\n7\t49655378\t391670:2\tG\tG[7:49562762[\t27\tPASS\tDISC_MAPQ=28;EVDNC=ASDIS;MAPQ=9;MATEID=391670:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_49539001_49564001_202C;SPAN=92616;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:42:27.8:27.8,0,77.3:10:8:-27.81:29.13\n7\t49896199\t391800:2\tG\tG[7:49498884[\t66\tPASS\tEVDNC=ASSMB;HOMSEQ=G;MAPQ=60;MATEID=391800:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_49882001_49907001_57C;SPAN=397315;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:22:22:6:66,6,0:22:0:-66.02:66.02\n7\t51526615\t392293:1\tG\tG[7:51530993[\t35\tPASS\tEVDNC=ASSMB;INSERTION=CTGCA;MAPQ=60;MATEID=392293:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_51523501_51548501_40C;SPAN=4378;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:38:35.6:35.6,0,58.7:14:0:-35.53:35.88\n7\t51530993\t392293:2\tG\t]7:51526615]G\t35\tPASS\tEVDNC=ASSMB;INSERTION=CTGCA;MAPQ=60;MATEID=392293:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_51523501_51548501_40C;SPAN=4378;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:38:35.6:35.6,0,58.7:14:0:-35.53:35.88\n7\t52635403\t916274:1\tA\t]22:28669566]A\t0\tPASS\tEVDNC=ASSMB;HOMSEQ=AA;MAPQ=60;MATEID=916274:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_22_28665001_28690001_38C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:117:0.2:0.2,0,293.9:10:0:-0.1223:18.51\n7\t53199663\t392924:1\tT\tT[7:53200024[\t69\tPASS\tEVDNC=ASSMB;INSERTION=TTCTA;MAPQ=60;MATEID=392924:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_7_53189501_53214501_90C;SPAN=361;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:23:22:6.3:69.3,6.3,0:23:0:-69.32:69.32\n7\t53200024\t392924:2\tA\t]7:53199663]A\t69\tPASS\tEVDNC=ASSMB;INSERTION=TTCTA;MAPQ=60;MATEID=392924:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_7_53189501_53214501_90C;SPAN=361;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:23:22:6.3:69.3,6.3,0:23:0:-69.32:69.32\n7\t53906970\t393216:1\tG\t]7:53908079]G\t27\tPASS\tDISC_MAPQ=52;EVDNC=ASDIS;MAPQ=60;MATEID=393216:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_53900001_53925001_84C;SPAN=1109;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:44:27.2:27.2,0,83.3:5:10:-27.24:28.84\n7\t53908079\t393216:2\tT\tT[7:53906970[\t27\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;MAPQ=45;MATEID=393216:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_53900001_53925001_84C;SPAN=1109;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:44:27.2:27.2,0,83.3:5:10:-27.24:28.84\n7\t54601280\t393430:1\tC\tC[7:54601847[\t69\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=393430:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_7_54586001_54611001_8C;SPAN=567;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:23:22:6.3:69.3,6.3,0:23:0:-69.32:69.32\n7\t54601847\t393430:2\tG\t]7:54601280]G\t69\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=393430:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_7_54586001_54611001_8C;SPAN=567;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:23:22:6.3:69.3,6.3,0:23:0:-69.32:69.32\n7\t55219065\t393626:1\tA\tA[7:55221369[\t85\tPASS\tEVDNC=ASSMB;HOMSEQ=TGCAATGTGCTTTTA;MAPQ=60;MATEID=393626:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_55198501_55223501_105C;SPAN=2304;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:27:28:7.8:85.8,7.8,0:27:0:-85.82:85.82\n7\t55221369\t393626:2\tT\t]7:55219065]T\t85\tPASS\tEVDNC=ASSMB;HOMSEQ=TGCAATGTGCTTTTA;MAPQ=60;MATEID=393626:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_55198501_55223501_105C;SPAN=2304;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:27:28:7.8:85.8,7.8,0:27:0:-85.82:85.82\n7\t55904079\t393853:1\tA\tA[7:55904442[\t79\tPASS\tDISC_MAPQ=58;EVDNC=ASDIS;HOMSEQ=AA;MAPQ=60;MATEID=393853:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_7_55884501_55909501_2C;SPAN=363;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:26:9:7.2:79.2,7.2,0:14:13:-79.22:79.22\n7\t55904442\t393853:2\tA\t]7:55904079]A\t79\tPASS\tDISC_MAPQ=58;EVDNC=ASDIS;HOMSEQ=AA;MAPQ=60;MATEID=393853:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_7_55884501_55909501_2C;SPAN=363;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:26:9:7.2:79.2,7.2,0:14:13:-79.22:79.22\n7\t56150117\t393964:1\tA\tA[7:56152553[\t72\tPASS\tDISC_MAPQ=54;EVDNC=DSCRD;IMPRECISE;MAPQ=54;MATEID=393964:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:56150117(+)-7:56152553(-)__7_56129501_56154501D;SPAN=2436;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:24:3:6.6:72.6,6.6,0:0:24:-72.62:72.62\n7\t56152553\t393964:2\tA\t]7:56150117]A\t72\tPASS\tDISC_MAPQ=37;EVDNC=DSCRD;IMPRECISE;MAPQ=37;MATEID=393964:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:56150117(+)-7:56152553(-)__7_56129501_56154501D;SPAN=2436;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:24:3:6.6:72.6,6.6,0:0:24:-72.62:72.62\n7\t57216586\t394359:1\tA\t]7:57217236]A\t5\tPASS\tDISC_MAPQ=33;EVDNC=DSCRD;IMPRECISE;MAPQ=33;MATEID=394359:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:57216586(-)-7:57217236(+)__7_57207501_57232501D;SPAN=650;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:100:5:5,0,245.9:0:10:-4.901:19.22\n7\t57217236\t394359:2\tT\tT[7:57216586[\t5\tPASS\tDISC_MAPQ=56;EVDNC=DSCRD;IMPRECISE;MAPQ=56;MATEID=394359:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:57216586(-)-7:57217236(+)__7_57207501_57232501D;SPAN=650;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:100:5:5,0,245.9:0:10:-4.901:19.22\n7\t57297199\t394436:1\tG\tG[7:57297511[\t40\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AATAGAGATTGGG;MAPQ=60;MATEID=394436:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_57281001_57306001_145C;SPAN=312;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:22:13.7:40.1,0,13.7:10:7:-40.63:40.63\n7\t57297511\t394436:2\tA\t]7:57297199]A\t40\tPASS\tDISC_MAPQ=59;EVDNC=ASDIS;HOMSEQ=AATAGAGATTGGG;MAPQ=60;MATEID=394436:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_57281001_57306001_145C;SPAN=312;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:22:13.7:40.1,0,13.7:10:7:-40.63:40.63\n7\t57352716\t416796:1\tA\t]7:100788247]A\t23\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=416796:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:57352716(-)-7:100788247(+)__7_100768501_100793501D;SPAN=43435531;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:34:23.6:23.6,0,59.9:0:10:-23.45:24.42\n7\t57407679\t394499:1\tT\tT[7:57408178[\t40\tPASS\tEVDNC=ASSMB;INSERTION=GACAACTAACTACAAC;MAPQ=60;MATEID=394499:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_57403501_57428501_20C;SPAN=499;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:17:56:40.4:40.4,0,99.8:17:0:-40.38:41.8\n7\t57408178\t394499:2\tT\t]7:57407679]T\t40\tPASS\tEVDNC=ASSMB;INSERTION=GACAACTAACTACAAC;MAPQ=60;MATEID=394499:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_57403501_57428501_20C;SPAN=499;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:17:56:40.4:40.4,0,99.8:17:0:-40.38:41.8\n7\t57765386\t395084:1\tA\t]7:57766112]A\t56\tPASS\tDISC_MAPQ=32;EVDNC=ASDIS;HOMSEQ=AAAAAGAGTGTTTCCAACGTGCTGAATCAATATAAAGGTTTA;MAPQ=60;MATEID=395084:2;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_7_57746501_57771501_136C;SPAN=726;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:22:57:56.6:56.6,0,86.3:14:14:-56.6:56.95\n7\t57766112\t395084:2\tA\tA[7:57765386[\t56\tPASS\tDISC_MAPQ=52;EVDNC=ASDIS;HOMSEQ=AAAAAGAGTGTTTCCAACGTGCTGAATCAATATAAAGGTTTA;MAPQ=58;MATEID=395084:1;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_7_57746501_57771501_136C;SPAN=726;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:22:57:56.6:56.6,0,86.3:14:14:-56.6:56.95\n7\t57898025\t395257:1\tT\tT[7:57899685[\t96\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AGACAGAAGAATTCTGAGAAACTTCTTTGTGAT;MAPQ=60;MATEID=395257:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_7_57893501_57918501_75C;SPAN=1660;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:33:46:17:96.2,0,17:19:21:-98.83:98.83\n7\t57899685\t395257:2\tA\t]7:57898025]A\t96\tPASS\tDISC_MAPQ=58;EVDNC=ASDIS;HOMSEQ=AGACAGAAGAATTCTGAGAAACTTCTTTGTGAT;MAPQ=60;MATEID=395257:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_7_57893501_57918501_75C;SPAN=1660;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:33:46:17:96.2,0,17:19:21:-98.83:98.83\n7\t57906103\t395274:1\tT\tT[7:57915470[\t57\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TAGTTTTTATGTGAAGATATT;MAPQ=60;MATEID=395274:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_57893501_57918501_192C;SPAN=9367;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:21:43:50.6:57.2,0,50.6:16:8:-57.25:57.25\n7\t57915470\t395274:2\tT\t]7:57906103]T\t57\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TAGTTTTTATGTGAAGATATT;MAPQ=60;MATEID=395274:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_57893501_57918501_192C;SPAN=9367;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:21:43:50.6:57.2,0,50.6:16:8:-57.25:57.25\n7\t58048127\t395755:1\tA\t[16:36178073[A\t19\tPASS\tDISC_MAPQ=24;EVDNC=DSCRD;IMPRECISE;MAPQ=24;MATEID=395755:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:58048127(-)-16:36178073(-)__7_58040501_58065501D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:37:19.4:19.4,0,72.2:0:9:-19.31:21.11\n7\t58174911\t396363:1\tT\t]7:60121773]T\t23\tPASS\tDISC_MAPQ=36;EVDNC=DSCRD;IMPRECISE;MAPQ=36;MATEID=396363:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:58174911(-)-7:60121773(+)__7_60098501_60123501D;SPAN=1946862;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:8:8:2.1:23.1,2.1,0:0:8:-23.11:23.11\n7\t58175578\t396150:1\tG\t]7:58189271]G\t42\tPASS\tDISC_MAPQ=43;EVDNC=DSCRD;IMPRECISE;MAPQ=43;MATEID=396150:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:58175578(-)-7:58189271(+)__7_58187501_58212501D;SPAN=13693;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:14:13:3.9:42.9,3.9,0:0:14:-42.91:42.91\n7\t58175826\t397693:1\tG\tG[7:61967061[\t56\tPASS\tDISC_MAPQ=37;EVDNC=DSCRD;IMPRECISE;MAPQ=37;MATEID=397693:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:58175826(+)-7:61967061(-)__7_61960501_61985501D;SPAN=3791235;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:19:2:5.1:56.1,5.1,0:0:19:-56.11:56.11\n7\t58188890\t396165:1\tA\t]7:61964170]A\t92\tPASS\tDISC_MAPQ=48;EVDNC=DSCRD;IMPRECISE;MAPQ=48;MATEID=396165:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:58188890(-)-7:61964170(+)__7_58187501_58212501D;SPAN=3775280;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:30:4:8.4:92.4,8.4,0:0:30:-92.42:92.42\n7\t58189271\t396150:2\tA\tA[7:58175578[\t42\tPASS\tDISC_MAPQ=54;EVDNC=DSCRD;IMPRECISE;MAPQ=54;MATEID=396150:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:58175578(-)-7:58189271(+)__7_58187501_58212501D;SPAN=13693;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:14:13:3.9:42.9,3.9,0:0:14:-42.91:42.91\n7\t58189293\t396166:1\tT\tT[7:61967062[\t42\tPASS\tDISC_MAPQ=49;EVDNC=DSCRD;IMPRECISE;MAPQ=49;MATEID=396166:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:58189293(+)-7:61967062(-)__7_58187501_58212501D;SPAN=3777769;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:14:7:3.9:42.9,3.9,0:0:14:-42.91:42.91\n7\t58342553\t396226:1\tT\t]7:58796722]T\t29\tPASS\tDISC_MAPQ=21;EVDNC=DSCRD;IMPRECISE;MAPQ=21;MATEID=396226:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:58342553(-)-7:58796722(+)__7_58775501_58800501D;SPAN=454169;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:10:12:0:29.7,0,0:0:10:-31.35:31.35\n7\t58342809\t396402:1\tA\tA[7:60480878[\t22\tPASS\tDISC_MAPQ=26;EVDNC=DSCRD;IMPRECISE;MAPQ=26;MATEID=396402:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:58342809(+)-7:60480878(-)__7_60466001_60491001D;SPAN=2138069;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:50:22.4:22.4,0,101.6:0:11:-22.26:25.25\n7\t58796722\t396226:2\tA\tA[7:58342553[\t29\tPASS\tDISC_MAPQ=15;EVDNC=DSCRD;IMPRECISE;MAPQ=15;MATEID=396226:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:58342553(-)-7:58796722(+)__7_58775501_58800501D;SPAN=454169;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:10:12:0:29.7,0,0:0:10:-31.35:31.35\n7\t60039036\t396422:1\tC\tC[7:60527192[\t59\tPASS\tDISC_MAPQ=47;EVDNC=DSCRD;IMPRECISE;MAPQ=47;MATEID=396422:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:60039036(+)-7:60527192(-)__7_60515001_60540001D;SPAN=488156;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:20:19:5.4:59.4,5.4,0:0:20:-59.41:59.41\n7\t60039103\t396423:1\tT\tT[7:60535194[\t24\tPASS\tDISC_MAPQ=39;EVDNC=DSCRD;IMPRECISE;MAPQ=39;MATEID=396423:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:60039103(+)-7:60535194(-)__7_60515001_60540001D;SPAN=496091;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:31:24.5:24.5,0,50.9:0:10:-24.3:24.91\n7\t60121773\t396363:2\tA\tA[7:58174911[\t23\tPASS\tDISC_MAPQ=30;EVDNC=DSCRD;IMPRECISE;MAPQ=30;MATEID=396363:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:58174911(-)-7:60121773(+)__7_60098501_60123501D;SPAN=1946862;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:8:8:2.1:23.1,2.1,0:0:8:-23.11:23.11\n7\t60480878\t396402:2\tA\t]7:58342809]A\t22\tPASS\tDISC_MAPQ=22;EVDNC=DSCRD;IMPRECISE;MAPQ=22;MATEID=396402:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:58342809(+)-7:60480878(-)__7_60466001_60491001D;SPAN=2138069;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:50:22.4:22.4,0,101.6:0:11:-22.26:25.25\n7\t60527192\t396422:2\tA\t]7:60039036]A\t59\tPASS\tDISC_MAPQ=49;EVDNC=DSCRD;IMPRECISE;MAPQ=49;MATEID=396422:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:60039036(+)-7:60527192(-)__7_60515001_60540001D;SPAN=488156;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:20:19:5.4:59.4,5.4,0:0:20:-59.41:59.41\n7\t60527476\t396432:1\tC\tC[7:60535187[\t89\tPASS\tDISC_MAPQ=38;EVDNC=DSCRD;IMPRECISE;MAPQ=38;MATEID=396432:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:60527476(+)-7:60535187(-)__7_60515001_60540001D;SPAN=7711;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:31:46:23.6:89.6,0,23.6:0:31:-91.3:91.3\n7\t60535187\t396432:2\tC\t]7:60527476]C\t89\tPASS\tDISC_MAPQ=26;EVDNC=DSCRD;IMPRECISE;MAPQ=26;MATEID=396432:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:60527476(+)-7:60535187(-)__7_60515001_60540001D;SPAN=7711;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:31:46:23.6:89.6,0,23.6:0:31:-91.3:91.3\n7\t60535194\t396423:2\tG\t]7:60039103]G\t24\tPASS\tDISC_MAPQ=33;EVDNC=DSCRD;IMPRECISE;MAPQ=33;MATEID=396423:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:60039103(+)-7:60535194(-)__7_60515001_60540001D;SPAN=496091;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:31:24.5:24.5,0,50.9:0:10:-24.3:24.91\n7\t60922568\t396589:1\tT\tT]7:61053929]\t29\tPASS\tDISC_MAPQ=31;EVDNC=DSCRD;IMPRECISE;MAPQ=31;MATEID=396589:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:60922568(+)-7:61053929(+)__7_60907001_60932001D;SPAN=131361;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:36:29.6:29.6,0,59.3:0:12:-29.49:30.1\n7\t60996030\t396795:1\tT\t]7:60996925]T\t9\tPASS\tDISC_MAPQ=45;EVDNC=DSCRD;IMPRECISE;MAPQ=45;MATEID=396795:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:60996030(-)-7:60996925(+)__7_6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PARTS=2;SCTG=c_7_64851501_64876501_7C;SPAN=2235;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:82:48:22.8:250.8,22.8,0:82:0:-250.9:250.9\n7\t64952998\t400010:1\tT\tT[7:64953657[\t18\tPASS\tEVDNC=ASSMB;INSERTION=CTGTATC;MAPQ=60;MATEID=400010:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_64949501_64974501_72C;SPAN=659;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:100:18.2:18.2,0,232.7:14:0:-18.1:29.09\n7\t64953657\t400010:2\tT\t]7:64952998]T\t18\tPASS\tEVDNC=ASSMB;INSERTION=CTGTATC;MAPQ=60;MATEID=400010:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_64949501_64974501_72C;SPAN=659;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:100:18.2:18.2,0,232.7:14:0:-18.1:29.09\n7\t65084152\t400626:1\tA\tA[7:65773613[\t40\tPASS\tDISC_MAPQ=48;EVDNC=DSCRD;IMPRECISE;MAPQ=48;MATEID=400626:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:65084152(+)-7:65773613(-)__7_65758001_65783001D;SPAN=689461;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:21:103:40.4:40.4,0,218.6:0:21:-40.37:47.41\n7\t65340142\t475916:1\tA\t]8:127521605]A\t99\tPASS\tDISC_MAPQ=0;EVDNC=ASDIS;HOMSEQ=ATA;MAPQ=60;MATEID=475916:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_127498001_127523001_8C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:36:56:37.1:103.1,0,37.1:34:6:-104.7:104.7\n7\t65398431\t400347:1\tA\tA]7:101463616]\t58\tPASS\tDISC_MAPQ=57;EVDNC=DSCRD;IMPRECISE;MAPQ=57;MATEID=400347:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:65398431(+)-7:101463616(+)__7_65390501_65415501D;SPAN=36065185;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:20:27:8.9:58.4,0,8.9:0:20:-60.44:60.44\n7\t65418384\t400358:1\tA\tA]12:42898470]\t52\tPASS\tDISC_MAPQ=32;EVDNC=DSCRD;IMPRECISE;MAPQ=32;MATEID=400358:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:65418384(+)-12:42898470(+)__7_65415001_65440001D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:18:6:4.8:52.8,4.8,0:0:18:-52.81:52.81\n7\t65418509\t400359:1\tG\t[12:42898157[G\t75\tPASS\tDISC_MAPQ=31;EVDNC=DSCRD;IMPRECISE;MAPQ=31;MATEID=400359:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:65418509(-)-12:42898157(-)__7_65415001_65440001D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:25:13:6.9:75.9,6.9,0:0:25:-75.92:75.92\n7\t65499251\t541640:1\tG\tG]10:38950967]\t27\tPASS\tDISC_MAPQ=16;EVDNC=DSCRD;IMPRECISE;MAPQ=16;MATEID=541640:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:65499251(+)-10:38950967(+)__10_38930501_38955501D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:33:27.2:27.2,0,53.6:0:11:-27.04:27.59\n7\t65610610\t405317:1\tA\t[7:74063673[A\t67\tPASS\tDISC_MAPQ=36;EVDNC=ASDIS;INSERTION=GGGTTGTTACAAACAAAAACTCCAATTTACAAACAAAACAAAAAACACCAGGAGGTT;MAPQ=60;MATEID=405317:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_74063501_74088501_20C;SPAN=8453063;SUBN=1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:24:41:34.7:67.7,0,34.7:18:15:-68.24:68.24\n7\t65761388\t400629:1\tG\t]7:65764818]G\t38\tPASS\tDISC_MAPQ=49;EVDNC=ASDIS;HOMSEQ=GA;MAPQ=60;MATEID=400629:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_65758001_65783001_12C;SPAN=3430;SUBN=1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:17:65:38:38,0,123.8:10:10:-37.85:40.49\n7\t65764818\t400629:2\tA\tA[7:65761388[\t38\tPASS\tDISC_MAPQ=20;EVDNC=ASDIS;HOMSEQ=GA;MAPQ=22;MATEID=400629:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_65758001_65783001_12C;SPAN=3430;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:17:65:38:38,0,123.8:10:10:-37.85:40.49\n7\t65773613\t400626:2\tT\t]7:65084152]T\t40\tPASS\tDISC_MAPQ=17;EVDNC=DSCRD;IMPRECISE;MAPQ=17;MATEID=400626:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:65084152(+)-7:65773613(-)__7_65758001_65783001D;SPAN=689461;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:21:103:40.4:40.4,0,218.6:0:21:-40.37:47.41\n7\t66112826\t400824:2\tA\tA[1:225835379[\t23\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=400824:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:225835379(-)-7:66112826(+)__7_66101001_66126001D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:36:23:23,0,65.9:0:10:-22.89:24.13\n7\t66532417\t399907:2\tG\tG[7:64821074[\t31\tPASS\tDISC_MAPQ=53;EVDNC=ASDIS;HOMSEQ=TG;MAPQ=60;MATEID=399907:1;MATENM=0;NM=0;NUMPARTS=3;SCTG=c_7_64802501_64827501_30C;SECONDARY;SPAN=1711343;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:31:31.1:31.1,0,44.3:6:9:-30.9:31.08\n7\t67020338\t401208:1\tA\tA[Un_KN707615v1_decoy:1[\t99\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=401208:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_67007501_67032501_17C;SPAN=-1;SUBN=5;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:45:65:31.4:130.4,0,31.4:45:0:-133.5:133.5\n7\t67021538\t401212:1\tT\tT]7:72805222]\t15\tPASS\tDISC_MAPQ=18;EVDNC=DSCRD;IMPRECISE;MAPQ=18;MATEID=401212:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:67021538(+)-7:72805222(+)__7_67007501_67032501D;SPAN=5783684;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:64:15.2:15.2,0,143.9:0:10:-15.02:21.3\n7\t67048108\t401222:1\tG\tG]7:72779501]\t25\tPASS\tDISC_MAPQ=43;EVDNC=DSCRD;IMPRECISE;MAPQ=43;MATEID=401222:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:67048108(+)-7:72779501(+)__7_67032001_67057001D;SPAN=5731393;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:14:9.2:25.7,0,9.2:0:9:-26.19:26.19\n7\t67962940\t401745:2\tT\t]7:63836181]T\t99\tPASS\tDISC_MAPQ=57;EVDNC=TSI_L;INSERTION=GAGCTCAGCTGAACATCTTGATATTTTTTCCATATTGCATCAGCTAGAATTGCCTAAGTAGAGT;MAPQ=60;MATEID=401745:1;MATENM=1;NM=13;NUMPARTS=3;REPSEQ=AA;SCTG=c_7_67963001_67988001_2C;SPAN=4126759;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:84:13:23.4:257.4,23.4,0:82:18:-257.5:257.5\n7\t68949183\t402429:1\tC\t]7:68949334]C\t99\tPASS\tEVDNC=ASSMB;HOMSEQ=CCTCAGCCTCCCAAA;MAPQ=60;MATEID=402429:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_68943001_68968001_29C;SPAN=151;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:48:90:93.5:133.1,0,93.5:48:0:-133.5:133.5\n7\t68949334\t402429:2\tA\tA[7:68949183[\t99\tPASS\tEVDNC=ASSMB;HOMSEQ=CCTCAGCCTCCCAAA;MAPQ=60;MATEID=402429:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_68943001_68968001_29C;SPAN=151;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:48:90:93.5:133.1,0,93.5:48:0:-133.5:133.5\n7\t69663221\t402862:1\tT\tT[7:69731113[\t99\tPASS\tEVDNC=ASSMB;INSERTION=GAGCTCTGTTACATTAATGAGG;MAPQ=60;MATEID=402862:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_69727001_69752001_13C;SPAN=67892;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:35:28:9.6:105.6,9.6,0:35:0:-105.6:105.6\n7\t69731113\t402862:2\tG\t]7:69663221]G\t99\tPASS\tEVDNC=ASSMB;INSERTION=GAGCTCTGTTACATTAATGAGG;MAPQ=60;MATEID=402862:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_69727001_69752001_13C;SPAN=67892;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:35:28:9.6:105.6,9.6,0:35:0:-105.6:105.6\n7\t70126134\t403057:1\tT\tT[7:70138905[\t30\tPASS\tEVDNC=ASSMB;HOMSEQ=T;MAPQ=60;MATEID=403057:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_70119001_70144001_40C;SPAN=12771;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:55:30.8:30.8,0,106.7:14:0:-30.75:33.15\n7\t70138905\t403057:2\tT\t]7:70126134]T\t30\tPASS\tEVDNC=ASSMB;HOMSEQ=T;MAPQ=60;MATEID=403057:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_70119001_70144001_40C;SPAN=12771;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:55:30.8:30.8,0,106.7:14:0:-30.75:33.15\n7\t70139641\t403167:1\tA\tA[7:70426389[\t19\tPASS\tEVDNC=ASSMB;HOMSEQ=A;MAPQ=60;MATEID=403167:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_70413001_70438001_60C;SPAN=286748;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:37:19.4:19.4,0,72.2:9:0:-19.31:21.11\n7\t70145470\t403153:1\tG\tG[7:70382794[\t37\tPASS\tEVDNC=ASSMB;HOMSEQ=TG;MAPQ=60;MATEID=403153:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_70364001_70389001_0C;SPAN=237324;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:31:37.7:37.7,0,37.7:14:0:-37.5:37.51\n7\t70175631\t403093:1\tC\tC[7:70235698[\t32\tPASS\tDISC_MAPQ=58;EVDNC=DSCRD;IMPRECISE;MAPQ=58;MATEID=403093:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:70175631(+)-7:70235698(-)__7_70217001_70242001D;SPAN=60067;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:15:5.6:32,0,5.6:0:11:-33.15:33.15\n7\t70235698\t403093:2\tC\t]7:70175631]C\t32\tPASS\tDISC_MAPQ=50;EVDNC=DSCRD;IMPRECISE;MAPQ=50;MATEID=403093:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:70175631(+)-7:70235698(-)__7_70217001_70242001D;SPAN=60067;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:15:5.6:32,0,5.6:0:11:-33.15:33.15\n7\t70268522\t403109:1\tA\tA[7:70306354[\t31\tPASS\tDISC_MAPQ=37;EVDNC=DSCRD;IMPRECISE;MAPQ=37;MATEID=403109:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:70268522(+)-7:70306354(-)__7_70266001_70291001D;SPAN=37832;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:17:8.6:31.7,0,8.6:0:11:-32.06:32.06\n7\t70306354\t403109:2\tG\t]7:70268522]G\t31\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=403109:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:70268522(+)-7:70306354(-)__7_70266001_70291001D;SPAN=37832;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:17:8.6:31.7,0,8.6:0:11:-32.06:32.06\n7\t70382794\t403153:2\tT\t]7:70145470]T\t37\tPASS\tEVDNC=ASSMB;HOMSEQ=TG;MAPQ=60;MATEID=403153:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_70364001_70389001_0C;SPAN=237324;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:31:37.7:37.7,0,37.7:14:0:-37.5:37.51\n7\t70420834\t403170:1\tT\tT[7:70424245[\t21\tPASS\tEVDNC=ASSMB;HOMSEQ=CTGTCTT;MAPQ=60;MATEID=403170:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_70413001_70438001_21C;SPAN=3411;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:52:21.8:21.8,0,107.6:11:0:-21.69:25.03\n7\t70424245\t403170:2\tC\t]7:70420834]C\t21\tPASS\tEVDNC=ASSMB;HOMSEQ=CTGTCTT;MAPQ=60;MATEID=403170:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_70413001_70438001_21C;SPAN=3411;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:52:21.8:21.8,0,107.6:11:0:-21.69:25.03\n7\t70426389\t403167:2\tA\t]7:70139641]A\t19\tPASS\tEVDNC=ASSMB;HOMSEQ=A;MAPQ=60;MATEID=403167:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_70413001_70438001_60C;SPAN=286748;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:37:19.4:19.4,0,72.2:9:0:-19.31:21.11\n7\t70534124\t403303:1\tA\tA[7:70788701[\t99\tPASS\tEVDNC=ASSMB;HOMSEQ=A;MAPQ=60;MATEID=403303:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_70780501_70805501_85C;SPAN=254577;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:37:24:10.2:112.2,10.2,0:37:0:-112.2:112.2\n7\t70788701\t403303:2\tA\t]7:70534124]A\t99\tPASS\tEVDNC=ASSMB;HOMSEQ=A;MAPQ=60;MATEID=403303:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_70780501_70805501_85C;SPAN=254577;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:37:24:10.2:112.2,10.2,0:37:0:-112.2:112.2\n7\t70956104\t403416:1\tA\tA]7:70973945]\t88\tPASS\tDISC_MAPQ=59;EVDNC=DSCRD;IMPRECISE;MAPQ=59;MATEID=403416:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:70956104(+)-7:70973945(+)__7_70952001_70977001D;SPAN=17841;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:30:39:8.9:88.1,0,8.9:0:30:-91.66:91.66\n7\t70961199\t403420:1\tA\t[7:70973894[A\t99\tPASS\tDISC_MAPQ=56;EVDNC=ASDIS;HOMSEQ=T;MAPQ=60;MATEID=403420:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_7_70952001_70977001_2C;SPAN=12695;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:69:55:19.2:211.2,19.2,0:46:37:-211.3:211.3\n7\t70973894\t403420:2\tT\t[7:70961199[T\t99\tPASS\tDISC_MAPQ=59;EVDNC=ASDIS;HOMSEQ=T;MAPQ=60;MATEID=403420:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_7_70952001_70977001_2C;SPAN=12695;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:69:55:19.2:211.2,19.2,0:46:37:-211.3:211.3\n7\t70973945\t403416:2\tG\tG]7:70956104]\t88\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=403416:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:70956104(+)-7:70973945(+)__7_70952001_70977001D;SPAN=17841;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:30:39:8.9:88.1,0,8.9:0:30:-91.66:91.66\n7\t71747047\t403893:1\tA\tA[7:71747968[\t99\tPASS\tDISC_MAPQ=58;EVDNC=DSCRD;IMPRECISE;MAPQ=58;MATEID=403893:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:71747047(+)-7:71747968(-)__7_71736001_71761001D;SPAN=921;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:48:6:13.2:145.2,13.2,0:0:48:-145.2:145.2\n7\t71747968\t403893:2\tG\t]7:71747047]G\t99\tPASS\tDISC_MAPQ=59;EVDNC=DSCRD;IMPRECISE;MAPQ=59;MATEID=403893:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:71747047(+)-7:71747968(-)__7_71736001_71761001D;SPAN=921;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:48:6:13.2:145.2,13.2,0:0:48:-145.2:145.2\n7\t71849933\t13069:2\tC\t]1:53954830]C\t3\tPASS\tEVDNC=ASSMB;INSERTION=ACAGTACTACAATGAACACTCTTA;MAPQ=60;MATEID=13069:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_53949001_53974001_68C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:93:3.8:3.8,0,228.2:9:0:-3.568:17.17\n7\t72499762\t404355:1\tA\tA[9:69278069[\t13\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=404355:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:72499762(+)-9:69278069(-)__7_72495501_72520501D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:46:13.7:13.7,0,99.5:0:8:-13.48:17.45\n7\t72779501\t401222:2\tG\tG]7:67048108]\t25\tPASS\tDISC_MAPQ=33;EVDNC=DSCRD;IMPRECISE;MAPQ=33;MATEID=401222:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:67048108(+)-7:72779501(+)__7_67032001_67057001D;SPAN=5731393;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:14:9.2:25.7,0,9.2:0:9:-26.19:26.19\n7\t72805222\t401212:2\tC\tC]7:67021538]\t15\tPASS\tDISC_MAPQ=42;EVDNC=DSCRD;IMPRECISE;MAPQ=42;MATEID=401212:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:67021538(+)-7:72805222(+)__7_67007501_67032501D;SPAN=5783684;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:64:15.2:15.2,0,143.9:0:10:-15.02:21.3\n7\t72934712\t404622:2\tG\t]7:49485855]G\t47\tPASS\tDISC_MAPQ=18;EVDNC=DSCRD;IMPRECISE;MAPQ=18;MATEID=404622:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:49485855(+)-7:72934712(-)__7_72912001_72937001D;SPAN=23448857;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:18:44:47:47,0,63.5:0:18:-47.05:47.19\n7\t72949883\t405269:1\tT\t]7:73964039]T\t9\tPASS\tEVDNC=ASSMB;HOMSEQ=TT;MAPQ=60;MATEID=405269:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_73941001_73966001_52C;SPAN=1014156;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:62:9.2:9.2,0,144.5:8:0:-8.98:16.32\n7\t73508991\t404986:1\tC\tC[7:73509284[\t1\tPASS\tEVDNC=ASSMB;HOMSEQ=TGCACTCCAGCCTGGGC;MAPQ=60;MATEID=404986:2;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_7_73500001_73525001_19C;SPAN=293;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:101:1.4:1.4,0,252.2:9:0:-1.319:16.83\n7\t73509284\t404986:2\tT\t]7:73508991]T\t1\tPASS\tEVDNC=ASSMB;HOMSEQ=TGCACTCCAGCCTGGGC;MAPQ=60;MATEID=404986:1;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_7_73500001_73525001_19C;SPAN=293;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:101:1.4:1.4,0,252.2:9:0:-1.319:16.83\n7\t73775876\t405107:1\tA\tA[7:73776219[\t0\tPASS\tEVDNC=ASSMB;HOMSEQ=AAGAAATTGA;MAPQ=60;MATEID=405107:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_73769501_73794501_43C;SPAN=343;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/0:9:376:75.8:0,75.8,1099:9:0:75.98:11.6\n7\t73776219\t405107:2\tA\t]7:73775876]A\t0\tPASS\tEVDNC=ASSMB;HOMSEQ=AAGAAATTGA;MAPQ=60;MATEID=405107:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_73769501_73794501_43C;SPAN=343;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/0:9:376:75.8:0,75.8,1099:9:0:75.98:11.6\n7\t73931246\t405264:1\tC\tC[7:73931529[\t0\tPASS\tEVDNC=ASSMB;HOMSEQ=CTCTGTTGCCCAGGCTGGAGTGCAGTGGC;MAPQ=60;MATEID=405264:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_73916501_73941501_30C;SPAN=283;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/0:4:121:20.4:0,20.4,343.2:4:0:20.81:5.717\n7\t73931529\t405264:2\tC\t]7:73931246]C\t0\tPASS\tEVDNC=ASSMB;HOMSEQ=CTCTGTTGCCCAGGCTGGAGTGCAGTGGC;MAPQ=60;MATEID=405264:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_73916501_73941501_30C;SPAN=283;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/0:4:121:20.4:0,20.4,343.2:4:0:20.81:5.717\n7\t73964039\t405269:2\tT\tT[7:72949883[\t9\tPASS\tEVDNC=ASSMB;HOMSEQ=TT;MAPQ=60;MATEID=405269:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_73941001_73966001_52C;SPAN=1014156;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:62:9.2:9.2,0,144.5:8:0:-8.98:16.32\n7\t74063673\t405317:2\tT\t[7:65610610[T\t67\tPASS\tDISC_MAPQ=55;EVDNC=ASDIS;INSERTION=GGGTTGTTACAAACAAAAACTCCAATTTACAAACAAAACAAAAAACACCAGGAGGTT;MAPQ=60;MATEID=405317:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_74063501_74088501_20C;SPAN=8453063;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:24:41:34.7:67.7,0,34.7:18:15:-68.24:68.24\n7\t74135538\t405369:1\tC\tC[7:74136636[\t99\tPASS\tDISC_MAPQ=56;EVDNC=DSCRD;IMPRECISE;MAPQ=56;MATEID=405369:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:74135538(+)-7:74136636(-)__7_74112501_74137501D;SPAN=1098;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:56:18:15.6:171.6,15.6,0:0:56:-171.6:171.6\n7\t74136636\t405369:2\tT\t]7:74135538]T\t99\tPASS\tDISC_MAPQ=56;EVDNC=DSCRD;IMPRECISE;MAPQ=56;MATEID=405369:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:74135538(+)-7:74136636(-)__7_74112501_74137501D;SPAN=1098;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:56:18:15.6:171.6,15.6,0:0:56:-171.6:171.6\n7\t74414165\t405574:1\tG\tG[7:74416932[\t99\tPASS\tDISC_MAPQ=57;EVDNC=ASDIS;HOMSEQ=AGGCCAGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAG;MAPQ=60;MATEID=405574:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_7_74406501_74431501_111C;SPAN=2767;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:95:51:26.4:290.4,26.4,0:38:75:-290.5:290.5\n7\t74416932\t405574:2\tA\t]7:74414165]A\t99\tPASS\tDISC_MAPQ=56;EVDNC=ASDIS;HOMSEQ=AGGCCAGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAG;MAPQ=60;MATEID=405574:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_7_74406501_74431501_111C;SPAN=2767;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:95:51:26.4:290.4,26.4,0:38:75:-290.5:290.5\n7\t74689123\t405771:1\tG\t[9:97902289[G\t55\tPASS\tDISC_MAPQ=50;EVDNC=ASDIS;INSERTION=GCTGTAAAAATAATAAAAATAATAAACGGAGCTGCCTGGAGGCGGCCGCACTCG;MAPQ=60;MATEID=405771:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_74676001_74701001_30C;SPAN=-1;SUBN=4;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:21:50:55.4:55.4,0,68.6:19:2:-55.27:55.37\n7\t74689227\t405772:1\tG\tG[7:74690972[\t0\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=G;MAPQ=60;MATEID=405772:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_74676001_74701001_24C;SPAN=1745;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/0:8:95:0:0,0,237.6:7:2:0.2957:14.75\n7\t74690972\t405772:2\tG\t]7:74689227]G\t0\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=G;MAPQ=60;MATEID=405772:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_74676001_74701001_24C;SPAN=1745;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/0:8:95:0:0,0,237.6:7:2:0.2957:14.75\n7\t74691113\t405776:1\tT\tT[7:74698961[\t2\tPASS\tEVDNC=ASSMB;HOMSEQ=GT;MAPQ=60;MATEID=405776:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_74676001_74701001_21C;SPAN=7848;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:122:2.3:2.3,0,302.6:11:0:-2.018:20.63\n7\t74698961\t405776:2\tG\t]7:74691113]G\t2\tPASS\tEVDNC=ASSMB;HOMSEQ=GT;MAPQ=60;MATEID=405776:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_74676001_74701001_21C;SPAN=7848;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:122:2.3:2.3,0,302.6:11:0:-2.018:20.63\n7\t74699096\t405780:1\tG\tG[7:74700246[\t0\tPASS\tEVDNC=ASSMB;HOMSEQ=GG;MAPQ=60;MATEID=405780:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_74676001_74701001_28C;SPAN=1150;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/0:6:143:20.2:0,20.2,399.3:6:0:20.39:9.202\n7\t74700246\t405780:2\tG\t]7:74699096]G\t0\tPASS\tEVDNC=ASSMB;HOMSEQ=GG;MAPQ=60;MATEID=405780:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_74676001_74701001_28C;SPAN=1150;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/0:6:143:20.2:0,20.2,399.3:6:0:20.39:9.202\n7\t75759979\t406698:1\tT\tT]7:101055231]\t21\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=406698:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:75759979(+)-7:101055231(+)__7_75754001_75779001D;SPAN=25295252;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:28:21.8:21.8,0,48.2:0:9:-21.84:22.4\n7\t76182048\t406928:1\tC\t[7:76200223[C\t51\tPASS\tDISC_MAPQ=57;EVDNC=ASDIS;INSERTION=AAATATAAACATTTGTCACAAGAGGTCTACTTCCTTTTGGATATTTTCACA;MAPQ=60;MATEID=406928:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_76195001_76220001_68C;SPAN=18175;SUBN=1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:20:51:51.8:51.8,0,74.9:18:6:-51.68:51.95\n7\t76200223\t406928:2\tT\t[7:76182048[T\t51\tPASS\tDISC_MAPQ=42;EVDNC=ASDIS;INSERTION=AAATATAAACATTTGTCACAAGAGGTCTACTTCCTTTTGGATATTTTCACA;MAPQ=60;MATEID=406928:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_76195001_76220001_68C;SPAN=18175;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:20:51:51.8:51.8,0,74.9:18:6:-51.68:51.95\n7\t76455113\t407277:1\tC\tC]7:76621893]\t36\tPASS\tDISC_MAPQ=28;EVDNC=DSCRD;IMPRECISE;MAPQ=28;MATEID=407277:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:76455113(+)-7:76621893(+)__7_76611501_76636501D;SPAN=166780;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:11:12:3.3:36.3,3.3,0:0:11:-35.86:35.86\n7\t76491075\t407182:1\tC\t]7:76989236]C\t17\tPASS\tDISC_MAPQ=16;EVDNC=DSCRD;IMPRECISE;MAPQ=16;MATEID=407182:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:76491075(-)-7:76989236(+)__7_76489001_76514001D;SPAN=498161;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:33:17.3:17.3,0,63.5:0:8:-17.13:18.75\n7\t76621893\t407277:2\tT\tT]7:76455113]\t36\tPASS\tDISC_MAPQ=44;EVDNC=DSCRD;IMPRECISE;MAPQ=44;MATEID=407277:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:76455113(+)-7:76621893(+)__7_76611501_76636501D;SPAN=166780;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:11:12:3.3:36.3,3.3,0:0:11:-35.86:35.86\n7\t76846695\t407388:2\tA\tA[1:83390671[\t16\tPASS\tDISC_MAPQ=38;EVDNC=DSCRD;IMPRECISE;MAPQ=38;MATEID=407388:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:83390671(-)-7:76846695(+)__7_76832001_76857001D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:35:16.7:16.7,0,69.5:0:8:-16.57:18.51\n7\t76847406\t407389:2\tC\t]1:83390908]C\t47\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=407389:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:83390908(+)-7:76847406(-)__7_76832001_76857001D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:17:32:30.8:47.3,0,30.8:0:17:-47.25:47.25\n7\t76882570\t407403:2\tC\tC[1:83426016[\t25\tPASS\tDISC_MAPQ=47;EVDNC=DSCRD;IMPRECISE;MAPQ=47;MATEID=407403:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:83426016(-)-7:76882570(+)__7_76881001_76906001D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:15:12.2:25.4,0,12.2:0:9:-25.74:25.74\n7\t76989236\t407182:2\tT\tT[7:76491075[\t17\tPASS\tDISC_MAPQ=17;EVDNC=DSCRD;IMPRECISE;MAPQ=17;MATEID=407182:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:76491075(-)-7:76989236(+)__7_76489001_76514001D;SPAN=498161;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:33:17.3:17.3,0,63.5:0:8:-17.13:18.75\n7\t77167731\t407669:1\tA\t[7:102703463[A\t9\tPASS\tDISC_MAPQ=47;EVDNC=DSCRD;IMPRECISE;MAPQ=47;MATEID=407669:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:77167731(-)-7:102703463(-)__7_77150501_77175501D;SPAN=25535732;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:59:9.8:9.8,0,138.5:0:8:-9.824:16.5\n7\t77647707\t407937:1\tA\tA[7:77648087[\t0\tPASS\tEVDNC=ASSMB;HOMSEQ=GTGGCTCAGGCCTGTAATCCCAGCATTTTGGGA;MAPQ=60;MATEID=407937:2;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_7_77640501_77665501_7C;SPAN=380;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/0:6:116:12.6:0,12.6,316.8:6:0:12.8:9.755\n7\t77648087\t407937:2\tG\t]7:77647707]G\t0\tPASS\tEVDNC=ASSMB;HOMSEQ=GTGGCTCAGGCCTGTAATCCCAGCATTTTGGGA;MAPQ=60;MATEID=407937:1;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_7_77640501_77665501_7C;SPAN=380;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/0:6:116:12.6:0,12.6,316.8:6:0:12.8:9.755\n7\t77743978\t407983:1\tG\tG[7:77744269[\t0\tPASS\tEVDNC=ASSMB;HOMSEQ=CAAGTGATCCTCCTGCCTTG;MAPQ=60;MATEID=407983:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_77738501_77763501_3C;SPAN=291;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/0:4:101:15:0,15,283.8:4:0:15.19:6.033\n7\t77744269\t407983:2\tC\t]7:77743978]C\t0\tPASS\tEVDNC=ASSMB;HOMSEQ=CAAGTGATCCTCCTGCCTTG;MAPQ=60;MATEID=407983:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_77738501_77763501_3C;SPAN=291;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/0:4:101:15:0,15,283.8:4:0:15.19:6.033\n7\t77744324\t407984:1\tC\tC[7:77744670[\t0\tPASS\tEVDNC=ASSMB;HOMSEQ=GGCCTCCCAAAGTGCTGGGATTACAGGTGTGAGCCAC;MAPQ=60;MATEID=407984:2;MATENM=0;NM=3;NUMPARTS=2;SCTG=c_7_77738501_77763501_34C;SPAN=346;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/0:5:92:9:0,9,247.5:5:0:9.356:8.239\n7\t77744670\t407984:2\tG\t]7:77744324]G\t0\tPASS\tEVDNC=ASSMB;HOMSEQ=GGCCTCCCAAAGTGCTGGGATTACAGGTGTGAGCCAC;MAPQ=60;MATEID=407984:1;MATENM=3;NM=0;NUMPARTS=2;SCTG=c_7_77738501_77763501_34C;SPAN=346;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/0:5:92:9:0,9,247.5:5:0:9.356:8.239\n7\t78728545\t408490:1\tT\tT[7:78728865[\t23\tPASS\tEVDNC=ASSMB;HOMSEQ=CCATCTTTCTCTGATCTTTTT;MAPQ=60;MATEID=408490:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_78718501_78743501_70C;SPAN=320;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:44:23.9:23.9,0,86.6:11:0:-23.94:25.95\n7\t78728865\t408490:2\tC\t]7:78728545]C\t23\tPASS\tEVDNC=ASSMB;HOMSEQ=CCATCTTTCTCTGATCTTTTT;MAPQ=60;MATEID=408490:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_78718501_78743501_70C;SPAN=320;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:44:23.9:23.9,0,86.6:11:0:-23.94:25.95\n7\t79125345\t412757:1\tG\tG[7:89181391[\t47\tPASS\tEVDNC=ASSMB;INSERTION=CCCACCAGTTGTTTCAGTGCTGTAG;MAPQ=60;MATEID=412757:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_7_89180001_89205001_22C;SPAN=10056046;SUBN=1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:17:31:27.8:47.6,0,27.8:17:0:-47.6:47.6\n7\t79131175\t408662:1\tC\t]20:54159808]C\t34\tPASS\tEVDNC=ASSMB;HOMSEQ=C;MAPQ=60;MATEID=408662:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_79110501_79135501_20C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:32:34.1:34.1,0,44:13:0:-33.92:34.03\n7\t79780343\t408962:1\tT\tT[7:79780659[\t0\tPASS\tEVDNC=ASSMB;INSERTION=TTGG;MAPQ=60;MATEID=408962:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_79772001_79797001_32C;SPAN=316;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/0:5:60:0.3:0,0.3,151.8:5:0:0.3605:9.196\n7\t79780659\t408962:2\tG\t]7:79780343]G\t0\tPASS\tEVDNC=ASSMB;INSERTION=TTGG;MAPQ=60;MATEID=408962:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_79772001_79797001_32C;SPAN=316;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/0:5:60:0.3:0,0.3,151.8:5:0:0.3605:9.196\n7\t80423705\t409225:1\tC\t[7:80603806[C\t99\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;INSERTION=ACAAATTGAATTGTAATT;MAPQ=60;MATEID=409225:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_80409001_80434001_4C;SPAN=180101;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:45:41:12.6:138.6,12.6,0:29:33:-138.6:138.6\n7\t80603145\t412890:1\tA\tA[7:89377687[\t31\tPASS\tEVDNC=ASSMB;INSERTION=A;MAPQ=60;MATEID=412890:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_89376001_89401001_13C;SPAN=8774542;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:28:31.7:31.7,0,38.3:12:0:-31.74:31.78\n7\t80603806\t409225:2\tA\t[7:80423705[A\t99\tPASS\tDISC_MAPQ=255;EVDNC=ASDIS;INSERTION=ACAAATTGAATTGTAATT;MAPQ=60;MATEID=409225:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_80409001_80434001_4C;SPAN=180101;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:45:41:12.6:138.6,12.6,0:29:33:-138.6:138.6\n7\t80607496\t409352:1\tG\t]7:80633495]G\t3\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=409352:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_80629501_80654501_61C;SPAN=25999;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:7:69:3.8:3.8,0,168.8:7:0:-3.712:13.5\n7\t80633495\t409352:2\tA\tA[7:80607496[\t3\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=409352:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_80629501_80654501_61C;SPAN=25999;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:7:69:3.8:3.8,0,168.8:7:0:-3.712:13.5\n7\t80708581\t409412:1\tA\tA[7:80710038[\t0\tPASS\tEVDNC=ASSMB;INSERTION=CACATATCTAT;MAPQ=60;MATEID=409412:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_80703001_80728001_87C;SPAN=1457;SUBN=1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/0:5:107:13.2:0,13.2,293.7:5:0:13.57:7.905\n7\t80710038\t409412:2\tA\t]7:80708581]A\t0\tPASS\tEVDNC=ASSMB;INSERTION=CACATATCTAT;MAPQ=60;MATEID=409412:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_80703001_80728001_87C;SPAN=1457;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/0:5:107:13.2:0,13.2,293.7:5:0:13.57:7.905\n7\t80914418\t409531:2\tT\t[5:43086248[T\t15\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=409531:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:43086248(-)-7:80914418(-)__7_80899001_80924001D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:63:15.5:15.5,0,140.9:0:10:-15.3:21.37\n7\t81172281\t409712:2\tT\tT]5:59692516]\t25\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=409712:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:59692516(+)-7:81172281(+)__7_81168501_81193501D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:40:25.1:25.1,0,74.6:0:11:-25.07:26.48\n7\t81172383\t409717:1\tG\tG[7:81172710[\t99\tPASS\tDISC_MAPQ=56;EVDNC=ASDIS;HOMSEQ=CCAGTTTCTT;MAPQ=60;MATEID=409717:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_7_81168501_81193501_5C;SPAN=327;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:66:31:18.3:201.3,18.3,0:48:21:-201.3:201.3\n7\t81172709\t409711:2\tA\t[5:59692316[A\t59\tPASS\tDISC_MAPQ=57;EVDNC=DSCRD;IMPRECISE;MAPQ=57;MATEID=409711:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:59692316(-)-7:81172709(-)__7_81168501_81193501D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:20:12:5.4:59.4,5.4,0:0:20:-59.41:59.41\n7\t81172710\t409717:2\tA\t]7:81172383]A\t99\tPASS\tDISC_MAPQ=57;EVDNC=ASDIS;HOMSEQ=CCAGTTTCTT;MAPQ=60;MATEID=409717:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_7_81168501_81193501_5C;SPAN=327;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:66:31:18.3:201.3,18.3,0:48:21:-201.3:201.3\n7\t81812267\t409937:1\tT\tT[7:81813154[\t92\tPASS\tDISC_MAPQ=58;EVDNC=DSCRD;IMPRECISE;MAPQ=58;MATEID=409937:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:81812267(+)-7:81813154(-)__7_81805501_81830501D;SPAN=887;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:28:31:8.4:92.4,8.4,0:0:28:-90.61:90.61\n7\t81813154\t409937:2\tA\t]7:81812267]A\t92\tPASS\tDISC_MAPQ=58;EVDNC=DSCRD;IMPRECISE;MAPQ=58;MATEID=409937:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:81812267(+)-7:81813154(-)__7_81805501_81830501D;SPAN=887;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:28:31:8.4:92.4,8.4,0:0:28:-90.61:90.61\n7\t82099424\t410047:1\tT\tT[7:82099749[\t99\tPASS\tEVDNC=ASSMB;HOMSEQ=GCAATACCTTCTT;MAPQ=60;MATEID=410047:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_82099501_82124501_74C;SPAN=325;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:34:22:9.3:102.3,9.3,0:34:0:-102.3:102.3\n7\t82099749\t410047:2\tG\t]7:82099424]G\t99\tPASS\tEVDNC=ASSMB;HOMSEQ=GCAATACCTTCTT;MAPQ=60;MATEID=410047:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_82099501_82124501_74C;SPAN=325;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:34:22:9.3:102.3,9.3,0:34:0:-102.3:102.3\n7\t82809484\t410398:1\tT\tT[7:83071482[\t19\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=410398:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:82809484(+)-7:83071482(-)__7_82785501_82810501D;SPAN=261998;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:37:19.4:19.4,0,72.2:0:9:-19.31:21.11\n7\t83071482\t410398:2\tC\t]7:82809484]C\t19\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=410398:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:82809484(+)-7:83071482(-)__7_82785501_82810501D;SPAN=261998;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:37:19.4:19.4,0,72.2:0:9:-19.31:21.11\n7\t84080562\t410862:1\tT\tT[7:84080872[\t99\tPASS\tEVDNC=ASSMB;HOMSEQ=GCAGCTTATAATTCTTT;MAPQ=60;MATEID=410862:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_84059501_84084501_52C;SPAN=310;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:46:31:12.6:138.6,12.6,0:46:0:-138.6:138.6\n7\t84080872\t410862:2\tG\t]7:84080562]G\t99\tPASS\tEVDNC=ASSMB;HOMSEQ=GCAGCTTATAATTCTTT;MAPQ=60;MATEID=410862:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_84059501_84084501_52C;SPAN=310;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:46:31:12.6:138.6,12.6,0:46:0:-138.6:138.6\n7\t85417192\t411352:1\tT\t]7:85451315]T\t21\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=411352:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:85417192(-)-7:85451315(+)__7_85431501_85456501D;SPAN=34123;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:30:21.2:21.2,0,54.2:0:9:-21.28:22.07\n7\t85451315\t411352:2\tA\tA[7:85417192[\t21\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=411352:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:85417192(-)-7:85451315(+)__7_85431501_85456501D;SPAN=34123;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:30:21.2:21.2,0,54.2:0:9:-21.28:22.07\n7\t87380246\t412124:1\tC\t]7:87380395]C\t66\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=412124:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_87367001_87392001_74C;SPAN=149;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:27:82:66.2:66.2,0,138.8:27:0:-66.08:67.55\n7\t87380395\t412124:2\tG\tG[7:87380246[\t66\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=412124:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_87367001_87392001_74C;SPAN=149;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:27:82:66.2:66.2,0,138.8:27:0:-66.08:67.55\n7\t89181391\t412757:2\tT\t]7:79125345]T\t47\tPASS\tEVDNC=ASSMB;INSERTION=CCCACCAGTTGTTTCAGTGCTGTAG;MAPQ=60;MATEID=412757:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_7_89180001_89205001_22C;SPAN=10056046;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:17:31:27.8:47.6,0,27.8:17:0:-47.6:47.6\n7\t89377687\t412890:2\tT\t]7:80603145]T\t31\tPASS\tEVDNC=ASSMB;INSERTION=A;MAPQ=60;MATEID=412890:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_89376001_89401001_13C;SPAN=8774542;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:28:31.7:31.7,0,38.3:12:0:-31.74:31.78\n7\t89969570\t413136:1\tT\tT[7:89969875[\t88\tPASS\tEVDNC=ASSMB;HOMSEQ=GACCTTATTCTT;MAPQ=60;MATEID=413136:2;MATENM=0;NM=5;NUMPARTS=2;SCTG=c_7_89964001_89989001_156C;SPAN=305;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:30:38:5.9:88.4,0,5.9:30:0:-92.39:92.39\n7\t89969875\t413136:2\tG\t]7:89969570]G\t88\tPASS\tEVDNC=ASSMB;HOMSEQ=GACCTTATTCTT;MAPQ=60;MATEID=413136:1;MATENM=5;NM=0;NUMPARTS=2;SCTG=c_7_89964001_89989001_156C;SPAN=305;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:30:38:5.9:88.4,0,5.9:30:0:-92.39:92.39\n7\t90181095\t413225:1\tC\tC[7:90183286[\t50\tPASS\tEVDNC=ASSMB;HOMSEQ=GC;MAPQ=60;MATEID=413225:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_90160001_90185001_65C;SPAN=2191;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:19:43:50.6:50.6,0,57.2:19:0:-50.63:50.66\n7\t90183286\t413225:2\tG\t]7:90181095]G\t50\tPASS\tEVDNC=ASSMB;HOMSEQ=GC;MAPQ=58;MATEID=413225:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_90160001_90185001_65C;SPAN=2191;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:19:43:50.6:50.6,0,57.2:19:0:-50.63:50.66\n7\t92838560\t414210:1\tC\tC]7:93538835]\t37\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=414210:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:92838560(+)-7:93538835(+)__7_92830501_92855501D;SPAN=700275;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:30:37.7:37.7,0,37.7:0:14:-37.78:37.78\n7\t93347523\t565388:1\tA\t]10:110418405]A\t72\tPASS\tDISC_MAPQ=20;EVDNC=ASDIS;MAPQ=60;MATEID=565388:2;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_10_110397001_110422001_54C;SPAN=-1;SUBN=5;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:24:12:6.6:72.6,6.6,0:14:15:-72.62:72.62\n7\t93538835\t414210:2\tT\tT]7:92838560]\t37\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=414210:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:92838560(+)-7:93538835(+)__7_92830501_92855501D;SPAN=700275;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:30:37.7:37.7,0,37.7:0:14:-37.78:37.78\n7\t93787629\t414547:1\tT\tT[7:93793680[\t69\tPASS\tEVDNC=ASSMB;HOMSEQ=TAATCATCATTCTT;MAPQ=60;MATEID=414547:2;MATENM=3;NM=4;NUMPARTS=2;SCTG=c_7_93786001_93811001_47C;SPAN=6051;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:23:17:6.3:69.3,6.3,0:23:0:-69.32:69.32\n7\t93793680\t414547:2\tT\t]7:93787629]T\t69\tPASS\tEVDNC=ASSMB;HOMSEQ=TAATCATCATTCTT;MAPQ=60;MATEID=414547:1;MATENM=4;NM=3;NUMPARTS=2;SCTG=c_7_93786001_93811001_47C;SPAN=6051;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:23:17:6.3:69.3,6.3,0:23:0:-69.32:69.32\n7\t93912504\t414574:1\tC\tC[7:93913228[\t37\tPASS\tDISC_MAPQ=36;EVDNC=ASDIS;INSERTION=CAA;MAPQ=60;MATEID=414574:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_93908501_93933501_70C;SPAN=724;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:19:8:37.7,0,8:6:11:-38.44:38.44\n7\t93913228\t414574:2\tT\t]7:93912504]T\t37\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;INSERTION=CAA;MAPQ=60;MATEID=414574:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_93908501_93933501_70C;SPAN=724;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:19:8:37.7,0,8:6:11:-38.44:38.44\n7\t94308706\t414626:1\tT\t]17:61570856]T\t24\tPASS\tEVDNC=ASSMB;INSERTION=GACTTGCTCT;MAPQ=60;MATEID=414626:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_94300501_94325501_8C;SPAN=-1;SUBN=3;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:18:18.2:24.8,0,18.2:9:0:-24.67:24.67\n7\t94467518\t461134:1\tA\t]8:86399769]A\t36\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AT;MAPQ=60;MATEID=461134:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_86387001_86412001_8C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:22:17:36.8,0,17:11:11:-37.05:37.05\n7\t95756956\t415049:1\tT\tT[7:95757273[\t99\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=CTCATTGGATTTGTT;MAPQ=60;MATEID=415049:2;MATENM=4;NM=1;NUMPARTS=2;SCTG=c_7_95746001_95771001_72C;SPAN=317;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:53:25:14.7:161.7,14.7,0:40:18:-161.7:161.7\n7\t95757273\t415049:2\tC\t]7:95756956]C\t99\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=CTCATTGGATTTGTT;MAPQ=60;MATEID=415049:1;MATENM=1;NM=4;NUMPARTS=2;SCTG=c_7_95746001_95771001_72C;SPAN=317;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:53:25:14.7:161.7,14.7,0:40:18:-161.7:161.7\n7\t96846589\t415398:1\tC\tC[7:96852683[\t92\tPASS\tEVDNC=ASSMB;HOMSEQ=GCAACTGGAACTTTC;MAPQ=60;MATEID=415398:2;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_7_96848501_96873501_26C;SPAN=6094;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:30:25:8.4:92.4,8.4,0:30:0:-92.42:92.42\n7\t96852683\t415398:2\tG\t]7:96846589]G\t92\tPASS\tEVDNC=ASSMB;HOMSEQ=GCAACTGGAACTTTC;MAPQ=60;MATEID=415398:1;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_7_96848501_96873501_26C;SPAN=6094;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:30:25:8.4:92.4,8.4,0:30:0:-92.42:92.42\n7\t97260359\t415757:1\tA\tA[7:97999493[\t46\tPASS\tEVDNC=ASSMB;INSERTION=A;MAPQ=44;MATEID=415757:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_97975501_98000501_51C;SPAN=739134;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:15:12:4.2:46.2,4.2,0:15:0:-46.21:46.21\n7\t97265435\t415571:1\tT\tT[7:97265662[\t69\tPASS\tEVDNC=ASSMB;HOMSEQ=AAAAACCTCAGTCCTT;MAPQ=60;MATEID=415571:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_97265001_97290001_19C;SPAN=227;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:23:18:6.3:69.3,6.3,0:23:0:-69.32:69.32\n7\t97265662\t415571:2\tA\t]7:97265435]A\t69\tPASS\tEVDNC=ASSMB;HOMSEQ=AAAAACCTCAGTCCTT;MAPQ=60;MATEID=415571:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_97265001_97290001_19C;SPAN=227;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:23:18:6.3:69.3,6.3,0:23:0:-69.32:69.32\n7\t97805476\t415701:1\tC\tC[7:97806091[\t75\tPASS\tDISC_MAPQ=59;EVDNC=ASDIS;HOMSEQ=AGGAGAATCCCTTGAACCCGGGAGGC;MAPQ=60;MATEID=415701:2;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_7_97804001_97829001_6C;SPAN=615;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:25:17:6.9:75.9,6.9,0:17:18:-75.92:75.92\n7\t97806091\t415701:2\tA\t]7:97805476]A\t75\tPASS\tDISC_MAPQ=47;EVDNC=ASDIS;HOMSEQ=AGGAGAATCCCTTGAACCCGGGAGGC;MAPQ=60;MATEID=415701:1;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_7_97804001_97829001_6C;SPAN=615;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:25:17:6.9:75.9,6.9,0:17:18:-75.92:75.92\n7\t97999493\t415757:2\tA\t]7:97260359]A\t46\tPASS\tEVDNC=ASSMB;INSERTION=A;MAPQ=60;MATEID=415757:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_97975501_98000501_51C;SPAN=739134;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:15:12:4.2:46.2,4.2,0:15:0:-46.21:46.21\n7\t98344850\t62784:2\tC\tC]1:232116541]\t46\tPASS\tDISC_MAPQ=9;EVDNC=ASDIS;HOMSEQ=GATTCTCCTGCCTCA;MAPQ=35;MATEID=62784:1;MATENM=3;NM=3;NUMPARTS=2;SCTG=c_1_232113001_232138001_17C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:16:10:4.2:46.2,4.2,0:14:2:-46.21:46.21\n7\t98547954\t416031:1\tA\t]7:98548572]A\t64\tPASS\tDISC_MAPQ=49;EVDNC=DSCRD;IMPRECISE;MAPQ=49;MATEID=416031:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:98547954(-)-7:98548572(+)__7_98539001_98564001D;SPAN=618;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:24:53:64.4:64.4,0,67.7:0:24:-64.33:64.34\n7\t98548572\t416031:2\tC\tC[7:98547954[\t64\tPASS\tDISC_MAPQ=41;EVDNC=DSCRD;IMPRECISE;MAPQ=41;MATEID=416031:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:98547954(-)-7:98548572(+)__7_98539001_98564001D;SPAN=618;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:24:53:64.4:64.4,0,67.7:0:24:-64.33:64.34\n7\t100458672\t426184:1\tT\t]7:129517338]T\t52\tPASS\tDISC_MAPQ=255;EVDNC=TSI_G;HOMSEQ=TCCCAGCACTTTGGGAGGCCGAGG;INSERTION=CCAGGTGCAGTGGCTCACACCTGTAT;MAPQ=17;MATEID=426184:2;MATENM=0;NM=1;NUMPARTS=3;SCTG=c_7_129507001_129532001_32C;SPAN=29058666;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:18:11:4.8:52.8,4.8,0:18:0:-52.81:52.81\n7\t100470421\t416704:2\tA\t[1:228154057[A\t79\tPASS\tDISC_MAPQ=56;EVDNC=ASDIS;HOMSEQ=AGC;MAPQ=60;MATEID=416704:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_100450001_100475001_20C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:26:15:7.2:79.2,7.2,0:14:19:-79.22:79.22\n7\t100658692\t62042:2\tG\t]1:228212126]G\t20\tPASS\tEVDNC=ASSMB;INSERTION=TGGAGGGTTTGGGAGCCTGTCCA;MAPQ=60;MATEID=62042:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_1_228193001_228218001_63C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:21:20.6:20.6,0,30.5:8:0:-20.51:20.65\n7\t100729963\t416768:1\tT\tT[7:100743094[\t93\tPASS\tDISC_MAPQ=54;EVDNC=ASDIS;HOMSEQ=GCTCACTGCAACCT;MAPQ=60;MATEID=416768:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_100719501_100744501_39C;SPAN=13131;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:32:44:17.3:93.2,0,17.3:23:15:-96.2:96.2\n7\t100743094\t416768:2\tG\t]7:100729963]G\t93\tPASS\tDISC_MAPQ=58;EVDNC=ASDIS;HOMSEQ=GCTCACTGCAACCT;MAPQ=60;MATEID=416768:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_100719501_100744501_39C;SPAN=13131;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:32:44:17.3:93.2,0,17.3:23:15:-96.2:96.2\n7\t100770427\t416800:1\tC\t[7:100773213[C\t8\tPASS\tDISC_MAPQ=45;EVDNC=ASDIS;HOMSEQ=AG;MAPQ=60;MATEID=416800:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_100768501_100793501_79C;SPAN=2786;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:66:8:8,0,156.5:6:7:-7.856:16.09\n7\t100773213\t416800:2\tA\t[7:100770427[A\t8\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AG;MAPQ=60;MATEID=416800:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_100768501_100793501_79C;SPAN=2786;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:66:8:8,0,156.5:6:7:-7.856:16.09\n7\t100788247\t416796:2\tG\tG[7:57352716[\t23\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=416796:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:57352716(-)-7:100788247(+)__7_100768501_100793501D;SPAN=43435531;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:34:23.6:23.6,0,59.9:0:10:-23.45:24.42\n7\t100804168\t416828:1\tT\tT[7:100804454[\t0\tPASS\tEVDNC=ASSMB;HOMSEQ=ACAGGCACGCACCACCATGCCCAGCTAATTTTT;MAPQ=60;MATEID=416828:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_100793001_100818001_64C;SPAN=286;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/0:4:60:3.6:0,3.6,158.4:4:0:3.662:6.956\n7\t100804454\t416828:2\tA\t]7:100804168]A\t0\tPASS\tEVDNC=ASSMB;HOMSEQ=ACAGGCACGCACCACCATGCCCAGCTAATTTTT;MAPQ=60;MATEID=416828:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_100793001_100818001_64C;SPAN=286;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/0:4:60:3.6:0,3.6,158.4:4:0:3.662:6.956\n7\t100867063\t417117:1\tG\tG[7:101077595[\t42\tPASS\tEVDNC=ASSMB;INSERTION=GACTAATTCC;MAPQ=60;MATEID=417117:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_101062501_101087501_16C;SPAN=210532;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:15:26:22.4:42.2,0,22.4:15:0:-42.5:42.5\n7\t100961967\t417018:1\tT\tT[7:100962263[\t63\tPASS\tEVDNC=ASSMB;HOMSEQ=AAAAACTTACCT;MAPQ=60;MATEID=417018:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_7_100940001_100965001_355C;SPAN=296;SUBN=1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:23:45:50:63.2,0,50:23:0:-63.36:63.36\n7\t100962263\t417018:2\tA\t]7:100961967]A\t63\tPASS\tEVDNC=ASSMB;HOMSEQ=AAAAACTTACCT;MAPQ=60;MATEID=417018:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_7_100940001_100965001_355C;SPAN=296;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:23:45:50:63.2,0,50:23:0:-63.36:63.36\n7\t101055231\t406698:2\tA\tA]7:75759979]\t21\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=406698:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:75759979(+)-7:101055231(+)__7_75754001_75779001D;SPAN=25295252;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:28:21.8:21.8,0,48.2:0:9:-21.84:22.4\n7\t101077595\t417117:2\tC\t]7:100867063]C\t42\tPASS\tEVDNC=ASSMB;INSERTION=GACTAATTCC;MAPQ=60;MATEID=417117:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_101062501_101087501_16C;SPAN=210532;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:15:26:22.4:42.2,0,22.4:15:0:-42.5:42.5\n7\t101357985\t417375:1\tT\tT[7:101360515[\t99\tPASS\tEVDNC=ASSMB;HOMSEQ=CCAATTTTTGTATTTTT;MAPQ=60;MATEID=417375:2;MATENM=5;NM=0;NUMPARTS=2;SCTG=c_7_101356501_101381501_58C;SPAN=2530;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:35:42:1.4:103.7,0,1.4:35:0:-109.7:109.7\n7\t101360515\t417375:2\tC\t]7:101357985]C\t99\tPASS\tEVDNC=ASSMB;HOMSEQ=CCAATTTTTGTATTTTT;MAPQ=60;MATEID=417375:1;MATENM=0;NM=5;NUMPARTS=2;SCTG=c_7_101356501_101381501_58C;SPAN=2530;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:35:42:1.4:103.7,0,1.4:35:0:-109.7:109.7\n7\t101415969\t417445:1\tT\tT[7:101416963[\t70\tPASS\tDISC_MAPQ=57;EVDNC=DSCRD;IMPRECISE;MAPQ=57;MATEID=417445:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:101415969(+)-7:101416963(-)__7_101405501_101430501D;SPAN=994;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:25:44:40.4:70.1,0,40.4:0:25:-70.58:70.58\n7\t101416963\t417445:2\tA\t]7:101415969]A\t70\tPASS\tDISC_MAPQ=59;EVDNC=DSCRD;IMPRECISE;MAPQ=59;MATEID=417445:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:101415969(+)-7:101416963(-)__7_101405501_101430501D;SPAN=994;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:25:44:40.4:70.1,0,40.4:0:25:-70.58:70.58\n7\t101463616\t400347:2\tT\tT]7:65398431]\t58\tPASS\tDISC_MAPQ=57;EVDNC=DSCRD;IMPRECISE;MAPQ=57;MATEID=400347:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:65398431(+)-7:101463616(+)__7_65390501_65415501D;SPAN=36065185;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:20:27:8.9:58.4,0,8.9:0:20:-60.44:60.44\n7\t101690931\t417617:1\tT\tT[7:101691236[\t46\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=CACCTGGCTCATTTTT;MAPQ=60;MATEID=417617:2;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_7_101675001_101700001_67C;SPAN=305;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:16:8:4.2:46.2,4.2,0:12:7:-46.21:46.21\n7\t101691236\t417617:2\tC\t]7:101690931]C\t46\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=CACCTGGCTCATTTTT;MAPQ=60;MATEID=417617:1;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_7_101675001_101700001_67C;SPAN=305;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:16:8:4.2:46.2,4.2,0:12:7:-46.21:46.21\n7\t102703463\t407669:2\tT\t[7:77167731[T\t9\tPASS\tDISC_MAPQ=55;EVDNC=DSCRD;IMPRECISE;MAPQ=55;MATEID=407669:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:77167731(-)-7:102703463(-)__7_77150501_77175501D;SPAN=25535732;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:59:9.8:9.8,0,138.5:0:8:-9.824:16.5\n7\t102848273\t418158:1\tG\tG[7:102848597[\t0\tPASS\tEVDNC=ASSMB;HOMSEQ=AAAAAATACACATTCG;MAPQ=60;MATEID=418158:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_102826501_102851501_41C;SPAN=324;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/0:7:84:0.3:0,0.3,211.2:7:0:0.5047:12.88\n7\t102848597\t418158:2\tA\t]7:102848273]A\t0\tPASS\tEVDNC=ASSMB;HOMSEQ=AAAAAATACACATTCG;MAPQ=60;MATEID=418158:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_102826501_102851501_41C;SPAN=324;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/0:7:84:0.3:0,0.3,211.2:7:0:0.5047:12.88\n7\t104489080\t418722:1\tT\tT[7:104489349[\t82\tPASS\tEVDNC=ASSMB;HOMSEQ=GTGCTGAAATCTT;MAPQ=60;MATEID=418722:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_104468001_104493001_3C;SPAN=269;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:27:24:7.5:82.5,7.5,0:27:0:-82.52:82.52\n7\t104489349\t418722:2\tG\t]7:104489080]G\t82\tPASS\tEVDNC=ASSMB;HOMSEQ=GTGCTGAAATCTT;MAPQ=60;MATEID=418722:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_104468001_104493001_3C;SPAN=269;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:27:24:7.5:82.5,7.5,0:27:0:-82.52:82.52\n7\t104546954\t418744:1\tA\tA[7:104547269[\t59\tPASS\tEVDNC=ASSMB;HOMSEQ=AAGAAATAGTAGCTCAA;MAPQ=60;MATEID=418744:2;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_7_104541501_104566501_49C;SPAN=315;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:18:20:5.4:59.4,5.4,0:18:0:-58.15:58.15\n7\t104547269\t418744:2\tA\t]7:104546954]A\t59\tPASS\tEVDNC=ASSMB;HOMSEQ=AAGAAATAGTAGCTCAA;MAPQ=60;MATEID=418744:1;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_7_104541501_104566501_49C;SPAN=315;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:18:20:5.4:59.4,5.4,0:18:0:-58.15:58.15\n7\t105520479\t419121:1\tG\t[7:105521175[G\t8\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=GAGGC;MAPQ=60;MATEID=419121:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_7_105497001_105522001_197C;SPAN=696;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:6:39:8.9:8.9,0,88.1:5:3:-8.844:12.73\n7\t105521175\t419121:2\tG\t[7:105520479[G\t8\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=GAGGC;MAPQ=60;MATEID=419121:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_7_105497001_105522001_197C;SPAN=696;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:6:39:8.9:8.9,0,88.1:5:3:-8.844:12.73\n7\t106074072\t419438:1\tC\t]7:106208676]C\t48\tPASS\tDISC_MAPQ=53;EVDNC=TSI_L;INSERTION=TA;MAPQ=60;MATEID=419438:2;MATENM=0;NM=1;NUMPARTS=3;SCTG=c_7_106207501_106232501_21C;SPAN=134604;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:17:26:15.8:48.8,0,15.8:13:9:-49.68:49.68\n7\t106074178\t419439:1\tC\tC[7:106081493[\t46\tPASS\tDISC_MAPQ=255;EVDNC=TSI_L;HOMSEQ=TCACC;INSERTION=TA;MAPQ=60;MATEID=419439:2;MATENM=1;NM=1;NUMPARTS=3;REPSEQ=CC;SCTG=c_7_106207501_106232501_21C;SPAN=7315;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:15:0:4.2:46.2,4.2,0:15:0:-46.21:46.21\n7\t106081493\t419441:1\tT\t]7:106208676]T\t55\tPASS\tDISC_MAPQ=255;EVDNC=TSI_G;HOMSEQ=TCACC;INSERTION=TACCATTGGACAGCCATACTCCAGGGAAAGGTCATTTTCCCACTCCATCCGCTTTCCGGCTCCCTGCTGACAGCCACCTCCACCACTCAATAAAACCCCCACAT;MAPQ=60;MATEID=419441:2;MATENM=0;NM=1;NUMPARTS=3;SCTG=c_7_106207501_106232501_21C;SPAN=127183;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:19:26:9.2:55.4,0,9.2:19:0:-57.2:57.2\n7\t106081493\t419439:2\tT\t]7:106074178]T\t46\tPASS\tDISC_MAPQ=255;EVDNC=TSI_L;HOMSEQ=TCACC;INSERTION=TA;MAPQ=60;MATEID=419439:1;MATENM=1;NM=1;NUMPARTS=3;REPSEQ=CC;SCTG=c_7_106207501_106232501_21C;SPAN=7315;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:15:0:4.2:46.2,4.2,0:15:0:-46.21:46.21\n7\t106093547\t419392:1\tC\tC[7:106093883[\t80\tPASS\tEVDNC=ASSMB;HOMSEQ=CAC;MAPQ=60;MATEID=419392:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_106085001_106110001_69C;SPAN=336;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:28:41:21.5:80.9,0,21.5:28:0:-82.75:82.75\n7\t106093883\t419392:2\tC\t]7:106093547]C\t80\tPASS\tEVDNC=ASSMB;HOMSEQ=CAC;MAPQ=60;MATEID=419392:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_106085001_106110001_69C;SPAN=336;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:28:41:21.5:80.9,0,21.5:28:0:-82.75:82.75\n7\t106208676\t419441:2\tT\tT[7:106081493[\t55\tPASS\tDISC_MAPQ=255;EVDNC=TSI_G;HOMSEQ=TCACC;INSERTION=TACCATTGGACAGCCATACTCCAGGGAAAGGTCATTTTCCCACTCCATCCGCTTTCCGGCTCCCTGCTGACAGCCACCTCCACCACTCAATAAAACCCCCACAT;MAPQ=60;MATEID=419441:1;MATENM=1;NM=0;NUMPARTS=3;SCTG=c_7_106207501_106232501_21C;SPAN=127183;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:19:26:9.2:55.4,0,9.2:19:0:-57.2:57.2\n7\t106208676\t419438:2\tT\tT[7:106074072[\t48\tPASS\tDISC_MAPQ=60;EVDNC=TSI_L;INSERTION=TA;MAPQ=60;MATEID=419438:1;MATENM=1;NM=0;NUMPARTS=3;SCTG=c_7_106207501_106232501_21C;SPAN=134604;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:17:26:15.8:48.8,0,15.8:13:9:-49.68:49.68\n7\t107823624\t419930:1\tA\tA[7:107824295[\t95\tPASS\tEVDNC=ASSMB;HOMSEQ=GA;MAPQ=60;MATEID=419930:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_107800001_107825001_4C;SPAN=671;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:32:25:8.7:95.7,8.7,0:32:0:-95.72:95.72\n7\t107824295\t419930:2\tG\t]7:107823624]G\t95\tPASS\tEVDNC=ASSMB;HOMSEQ=GA;MAPQ=60;MATEID=419930:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_107800001_107825001_4C;SPAN=671;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:32:25:8.7:95.7,8.7,0:32:0:-95.72:95.72\n7\t108712413\t420213:1\tA\tA[7:108712728[\t7\tPASS\tEVDNC=ASSMB;HOMSEQ=AAGAGGAAAGA;MAPQ=60;MATEID=420213:2;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_7_108706501_108731501_59C;SPAN=315;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:4:21:7.4:7.4,0,43.7:4:0:-7.301:8.898\n7\t108712728\t420213:2\tA\t]7:108712413]A\t7\tPASS\tEVDNC=ASSMB;HOMSEQ=AAGAGGAAAGA;MAPQ=60;MATEID=420213:1;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_7_108706501_108731501_59C;SPAN=315;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:4:21:7.4:7.4,0,43.7:4:0:-7.301:8.898\n7\t109796632\t420517:1\tT\tT[7:109813845[\t99\tPASS\tDISC_MAPQ=57;EVDNC=ASDIS;INSERTION=TG;MAPQ=60;MATEID=420517:2;MATENM=8;NM=5;NUMPARTS=2;SCTG=c_7_109809001_109834001_9C;SPAN=17213;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:49:9:13.5:148.5,13.5,0:27:35:-148.5:148.5\n7\t109813845\t420517:2\tT\t]7:109796632]T\t99\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;INSERTION=TG;MAPQ=60;MATEID=420517:1;MATENM=5;NM=8;NUMPARTS=2;SCTG=c_7_109809001_109834001_9C;SPAN=17213;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:49:9:13.5:148.5,13.5,0:27:35:-148.5:148.5\n7\t110541911\t420747:1\tT\tT[7:110548376[\t19\tPASS\tEVDNC=ASSMB;HOMSEQ=TCT;MAPQ=60;MATEID=420747:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_110544001_110569001_88C;SPAN=6465;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:7:7:1.8:19.8,1.8,0:7:0:-19.8:19.8\n7\t110548376\t420747:2\tT\t]7:110541911]T\t19\tPASS\tEVDNC=ASSMB;HOMSEQ=TCT;MAPQ=60;MATEID=420747:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_110544001_110569001_88C;SPAN=6465;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:7:7:1.8:19.8,1.8,0:7:0:-19.8:19.8\n7\t111002957\t420853:1\tA\tA[7:111065631[\t20\tPASS\tEVDNC=ASSMB;HOMSEQ=A;MAPQ=60;MATEID=420853:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_111058501_111083501_11C;SPAN=62674;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:7:10:3.8:20.3,0,3.8:7:0:-20.82:20.82\n7\t111065631\t420853:2\tA\t]7:111002957]A\t20\tPASS\tEVDNC=ASSMB;HOMSEQ=A;MAPQ=60;MATEID=420853:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_111058501_111083501_11C;SPAN=62674;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:7:10:3.8:20.3,0,3.8:7:0:-20.82:20.82\n7\t111077514\t420873:1\tG\tG[7:111178811[\t29\tPASS\tEVDNC=ASSMB;HOMSEQ=TAG;MAPQ=60;MATEID=420873:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_111156501_111181501_10C;SPAN=101297;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:13:2.9:29.3,0,2.9:10:0:-30.55:30.55\n7\t111113982\t420868:1\tA\tA[7:111115536[\t32\tPASS\tEVDNC=ASSMB;INSERTION=TAAAGAGAGTGTAAA;MAPQ=60;MATEID=420868:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_111107501_111132501_10C;SPAN=1554;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:14:2.6:32.3,0,2.6:11:0:-33.83:33.83\n7\t111115536\t420868:2\tT\t]7:111113982]T\t32\tPASS\tEVDNC=ASSMB;INSERTION=TAAAGAGAGTGTAAA;MAPQ=60;MATEID=420868:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_111107501_111132501_10C;SPAN=1554;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:14:2.6:32.3,0,2.6:11:0:-33.83:33.83\n7\t111178811\t420873:2\tT\t]7:111077514]T\t29\tPASS\tEVDNC=ASSMB;HOMSEQ=TAG;MAPQ=60;MATEID=420873:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_111156501_111181501_10C;SPAN=101297;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:13:2.9:29.3,0,2.9:10:0:-30.55:30.55\n7\t111413698\t420918:1\tA\tA[12:107809482[\t75\tPASS\tEVDNC=ASSMB;HOMSEQ=AA;MAPQ=60;MATEID=420918:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_7_111401501_111426501_27C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:25:22:6.9:75.9,6.9,0:25:0:-75.92:75.92\n7\t111682701\t916278:1\tG\t]22:28669482]G\t0\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=GT;MAPQ=60;MATEID=916278:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_22_28665001_28690001_206C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/0:7:102:5.4:0,5.4,267.3:7:2:5.564:12.26\n7\t113776121\t421472:1\tT\tT[7:113782153[\t75\tPASS\tEVDNC=ASSMB;HOMSEQ=CATAATGGCATTTTT;MAPQ=60;MATEID=421472:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_113778001_113803001_26C;SPAN=6032;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:25:12:6.9:75.9,6.9,0:25:0:-75.92:75.92\n7\t113782153\t421472:2\tC\t]7:113776121]C\t75\tPASS\tEVDNC=ASSMB;HOMSEQ=CATAATGGCATTTTT;MAPQ=60;MATEID=421472:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_113778001_113803001_26C;SPAN=6032;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:25:12:6.9:75.9,6.9,0:25:0:-75.92:75.92\n7\t114313463\t421622:1\tC\tC[7:114313759[\t23\tPASS\tEVDNC=ASSMB;HOMSEQ=AAAACAAAAATATTGTC;MAPQ=60;MATEID=421622:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_114292501_114317501_13C;SPAN=296;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:23:23.3:23.3,0,33.2:9:0:-23.24:23.37\n7\t114313759\t421622:2\tA\t]7:114313463]A\t23\tPASS\tEVDNC=ASSMB;HOMSEQ=AAAACAAAAATATTGTC;MAPQ=60;MATEID=421622:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_114292501_114317501_13C;SPAN=296;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:23:23.3:23.3,0,33.2:9:0:-23.24:23.37\n7\t117201963\t422406:1\tT\tT[7:117202261[\t72\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=CTCGAAGCTATCTT;MAPQ=60;MATEID=422406:2;MATENM=0;NM=3;NUMPARTS=2;SCTG=c_7_117183501_117208501_4C;SPAN=298;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:24:15:6.6:72.6,6.6,0:13:12:-72.62:72.62\n7\t117202261\t422406:2\tC\t]7:117201963]C\t72\tPASS\tDISC_MAPQ=59;EVDNC=ASDIS;HOMSEQ=CTCGAAGCTATCTT;MAPQ=60;MATEID=422406:1;MATENM=3;NM=0;NUMPARTS=2;SCTG=c_7_117183501_117208501_4C;SPAN=298;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:24:15:6.6:72.6,6.6,0:13:12:-72.62:72.62\n7\t118253913\t422590:1\tC\tC[7:118254199[\t46\tPASS\tEVDNC=ASSMB;HOMSEQ=CATCCTTGTGTATTTTC;MAPQ=60;MATEID=422590:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_118237001_118262001_43C;SPAN=286;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:14:15:4.2:46.2,4.2,0:14:0:-46.19:46.19\n7\t118254199\t422590:2\tC\t]7:118253913]C\t46\tPASS\tEVDNC=ASSMB;HOMSEQ=CATCCTTGTGTATTTTC;MAPQ=60;MATEID=422590:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_118237001_118262001_43C;SPAN=286;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:14:15:4.2:46.2,4.2,0:14:0:-46.19:46.19\n7\t119191314\t422887:1\tA\tA[7:119194700[\t92\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=422887:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:119191314(+)-7:119194700(-)__7_119192501_119217501D;SPAN=3386;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:30:7:8.4:92.4,8.4,0:0:30:-92.42:92.42\n7\t119194700\t422887:2\tG\t]7:119191314]G\t92\tPASS\tDISC_MAPQ=58;EVDNC=DSCRD;IMPRECISE;MAPQ=58;MATEID=422887:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:119191314(+)-7:119194700(-)__7_119192501_119217501D;SPAN=3386;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:30:7:8.4:92.4,8.4,0:0:30:-92.42:92.42\n7\t120983381\t423222:2\tC\tC[6:70153588[\t29\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=423222:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:70153588(-)-7:120983381(+)__7_120981001_121006001D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:10:7:2.7:29.7,2.7,0:0:10:-29.71:29.71\n7\t121241062\t423316:1\tG\tG[7:121241381[\t64\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AAAAAGAAATTATAAAACAG;MAPQ=60;MATEID=423316:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_121226001_121251001_119C;SPAN=319;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:22:29:8.3:64.4,0,8.3:18:7:-66.94:66.94\n7\t121241381\t423316:2\tA\t]7:121241062]A\t64\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AAAAAGAAATTATAAAACAG;MAPQ=60;MATEID=423316:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_121226001_121251001_119C;SPAN=319;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:22:29:8.3:64.4,0,8.3:18:7:-66.94:66.94\n7\t121522363\t423406:1\tC\t[7:121522547[C\t26\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=423406:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:121522363(-)-7:121522547(-)__7_121520001_121545001D;SPAN=184;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:22:26.9:26.9,0,26.9:0:10:-26.83:26.83\n7\t121522547\t423406:2\tA\t[7:121522363[A\t26\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=423406:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:121522363(-)-7:121522547(-)__7_121520001_121545001D;SPAN=184;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:22:26.9:26.9,0,26.9:0:10:-26.83:26.83\n7\t122571822\t423890:1\tT\tT[7:122796082[\t46\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=423890:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_122794001_122819001_30C;SPAN=224260;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:16:13:4.2:46.2,4.2,0:16:0:-46.21:46.21\n7\t122796082\t423890:2\tG\t]7:122571822]G\t46\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=423890:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_122794001_122819001_30C;SPAN=224260;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:16:13:4.2:46.2,4.2,0:16:0:-46.21:46.21\n7\t123137650\t424046:1\tG\t]7:123249081]G\t18\tPASS\tEVDNC=ASSMB;INSERTION=CCCGGAAGGT;MAPQ=60;MATEID=424046:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_7_123235001_123260001_45C;SPAN=111431;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:7:18:18.2:18.2,0,24.8:7:0:-18.05:18.15\n7\t123249081\t424046:2\tA\tA[7:123137650[\t18\tPASS\tEVDNC=ASSMB;INSERTION=CCCGGAAGGT;MAPQ=60;MATEID=424046:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_7_123235001_123260001_45C;SPAN=111431;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:7:18:18.2:18.2,0,24.8:7:0:-18.05:18.15\n7\t123280266\t424085:1\tA\t]7:123375157]A\t25\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=424085:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:123280266(-)-7:123375157(+)__7_123357501_123382501D;SPAN=94891;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:17:15.2:25.1,0,15.2:0:9:-24.99:24.99\n7\t123375157\t424085:2\tC\tC[7:123280266[\t25\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=424085:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:123280266(-)-7:123375157(+)__7_123357501_123382501D;SPAN=94891;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:17:15.2:25.1,0,15.2:0:9:-24.99:24.99\n7\t125624166\t634200:1\tC\tC[12:73620587[\t75\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;INSERTION=ATTATA;MAPQ=60;MATEID=634200:2;MATENM=0;NM=8;NUMPARTS=2;SCTG=c_12_73598001_73623001_3C;SPAN=-1;SUBN=3;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:25:24:6.9:75.9,6.9,0:24:7:-75.92:75.92\n7\t126105456\t425065:1\tG\t]7:126150623]G\t18\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=425065:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_126150501_126175501_8C;SPAN=45167;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:7:18:18.2:18.2,0,24.8:7:0:-18.05:18.15\n7\t126150623\t425065:2\tT\tT[7:126105456[\t18\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=425065:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_126150501_126175501_8C;SPAN=45167;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:7:18:18.2:18.2,0,24.8:7:0:-18.05:18.15\n7\t128126376\t425599:1\tT\tT[7:128126677[\t59\tPASS\tEVDNC=ASSMB;HOMSEQ=GGGCACAGCATCTT;MAPQ=60;MATEID=425599:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_128110501_128135501_5C;SPAN=301;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:20:16:5.4:59.4,5.4,0:20:0:-59.41:59.41\n7\t128126677\t425599:2\tG\t]7:128126376]G\t59\tPASS\tEVDNC=ASSMB;HOMSEQ=GGGCACAGCATCTT;MAPQ=60;MATEID=425599:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_128110501_128135501_5C;SPAN=301;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:20:16:5.4:59.4,5.4,0:20:0:-59.41:59.41\n7\t128669172\t425900:1\tT\tT[7:128669476[\t41\tPASS\tEVDNC=ASSMB;HOMSEQ=TGAACACCAGCTCTT;MAPQ=60;MATEID=425900:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_128649501_128674501_79C;SPAN=304;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:18:1.7:41.3,0,1.7:14:0:-42.92:42.92\n7\t128669476\t425900:2\tT\t]7:128669172]T\t41\tPASS\tEVDNC=ASSMB;HOMSEQ=TGAACACCAGCTCTT;MAPQ=60;MATEID=425900:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_128649501_128674501_79C;SPAN=304;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:18:1.7:41.3,0,1.7:14:0:-42.92:42.92\n7\t129202957\t426099:1\tC\tC[7:129204303[\t23\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AGC;MAPQ=60;MATEID=426099:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_129188501_129213501_47C;SPAN=1346;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:23:23.3:23.3,0,33.2:5:8:-23.24:23.37\n7\t129204303\t426099:2\tA\t]7:129202957]A\t23\tPASS\tDISC_MAPQ=59;EVDNC=ASDIS;HOMSEQ=AGC;MAPQ=60;MATEID=426099:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_129188501_129213501_47C;SPAN=1346;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:23:23.3:23.3,0,33.2:5:8:-23.24:23.37\n7\t129517338\t426184:2\tG\tG[7:100458672[\t52\tPASS\tDISC_MAPQ=255;EVDNC=TSI_G;HOMSEQ=TCCCAGCACTTTGGGAGGCCGAGG;INSERTION=CCAGGTGCAGTGGCTCACACCTGTAT;MAPQ=60;MATEID=426184:1;MATENM=1;NM=0;NUMPARTS=3;SCTG=c_7_129507001_129532001_32C;SPAN=29058666;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:18:11:4.8:52.8,4.8,0:18:0:-52.81:52.81\n7\t131224139\t426882:1\tA\t]7:131224307]A\t18\tPASS\tEVDNC=ASSMB;HOMSEQ=ACCTGTAATCCCAGCACTTTGGGA;MAPQ=60;MATEID=426882:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_131222001_131247001_28C;SPAN=168;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:40:18.5:18.5,0,81.2:9:0:-18.47:20.76\n7\t131224307\t426882:2\tA\tA[7:131224139[\t18\tPASS\tEVDNC=ASSMB;HOMSEQ=ACCTGTAATCCCAGCACTTTGGGA;MAPQ=60;MATEID=426882:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_131222001_131247001_28C;SPAN=168;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:40:18.5:18.5,0,81.2:9:0:-18.47:20.76\n7\t133151419\t427472:1\tT\tT[7:133151590[\t8\tPASS\tEVDNC=ASSMB;INSERTION=CAGGGCCACA;MAPQ=60;MATEID=427472:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_133133001_133158001_28C;SPAN=171;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:4:19:8:8,0,37.7:4:0:-7.863:9.094\n7\t133151590\t427472:2\tG\t]7:133151419]G\t8\tPASS\tEVDNC=ASSMB;INSERTION=CAGGGCCACA;MAPQ=60;MATEID=427472:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_133133001_133158001_28C;SPAN=171;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:4:19:8:8,0,37.7:4:0:-7.863:9.094\n7\t133422936\t427543:1\tA\tA[7:133423251[\t22\tPASS\tEVDNC=ASSMB;HOMSEQ=AATAGAATTAATGGAGCA;MAPQ=60;MATEID=427543:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_7_133402501_133427501_32C;SPAN=315;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:27:22.1:22.1,0,45.2:9:0:-22.12:22.58\n7\t133423251\t427543:2\tA\t]7:133422936]A\t22\tPASS\tEVDNC=ASSMB;HOMSEQ=AATAGAATTAATGGAGCA;MAPQ=60;MATEID=427543:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_7_133402501_133427501_32C;SPAN=315;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:27:22.1:22.1,0,45.2:9:0:-22.12:22.58\n7\t133435161\t427546:1\tA\tA[8:103863624[\t42\tPASS\tEVDNC=ASSMB;HOMSEQ=TTA;MAPQ=60;MATEID=427546:2;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_7_133427001_133452001_4C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:14:13:3.9:42.9,3.9,0:14:0:-42.91:42.91\n7\t134739891\t427922:1\tC\t[9:108352880[C\t26\tPASS\tDISC_MAPQ=255;EVDNC=ASDIS;HOMSEQ=TAAAATTATG;MAPQ=60;MATEID=427922:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_134725501_134750501_66C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:9:8:2.4:26.4,2.4,0:8:2:-26.41:26.41\n7\t137149719\t428770:1\tT\tT[7:137150005[\t52\tPASS\tEVDNC=ASSMB;HOMSEQ=GACAAAGGACAATTCTT;MAPQ=60;MATEID=428770:2;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_7_137126501_137151501_31C;SPAN=286;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:18:11:4.8:52.8,4.8,0:18:0:-52.81:52.81\n7\t137150005\t428770:2\tG\t]7:137149719]G\t52\tPASS\tEVDNC=ASSMB;HOMSEQ=GACAAAGGACAATTCTT;MAPQ=60;MATEID=428770:1;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_7_137126501_137151501_31C;SPAN=286;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:18:11:4.8:52.8,4.8,0:18:0:-52.81:52.81\n7\t137638467\t428909:1\tT\t]7:137638575]T\t31\tPASS\tEVDNC=ASSMB;HOMSEQ=TATATATGTGTGTATATATATACACACATATAT;MAPQ=60;MATEID=428909:2;MATENM=1;NM=1;NUMPARTS=3;SCTG=c_7_137616501_137641501_8C;SECONDARY;SPAN=108;SUBN=3;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:18:11.6:31.4,0,11.6:11:0:-31.6:31.6\n7\t137638575\t428909:2\tT\tT[7:137638467[\t31\tPASS\tEVDNC=ASSMB;HOMSEQ=TATATATGTGTGTATATATATACACACATATAT;MAPQ=60;MATEID=428909:1;MATENM=1;NM=1;NUMPARTS=3;SCTG=c_7_137616501_137641501_8C;SECONDARY;SPAN=108;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:18:11.6:31.4,0,11.6:11:0:-31.6:31.6\n7\t138615526\t429186:1\tA\tA[7:138615753[\t46\tPASS\tEVDNC=ASSMB;HOMSEQ=CCACTGCACTCCA;MAPQ=60;MATEID=429186:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_7_138596501_138621501_46C;SPAN=227;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:16:8:4.2:46.2,4.2,0:16:0:-46.21:46.21\n7\t138615753\t429186:2\tC\t]7:138615526]C\t46\tPASS\tEVDNC=ASSMB;HOMSEQ=CCACTGCACTCCA;MAPQ=60;MATEID=429186:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_7_138596501_138621501_46C;SPAN=227;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:16:8:4.2:46.2,4.2,0:16:0:-46.21:46.21\n7\t139057536\t429380:1\tT\tT[7:139057840[\t66\tPASS\tEVDNC=ASSMB;HOMSEQ=AACAATTACATTTT;MAPQ=60;MATEID=429380:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_139037501_139062501_16C;SPAN=304;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:20:22:6:66,6,0:20:0:-64.93:64.93\n7\t139057840\t429380:2\tA\t]7:139057536]A\t66\tPASS\tEVDNC=ASSMB;HOMSEQ=AACAATTACATTTT;MAPQ=60;MATEID=429380:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_139037501_139062501_16C;SPAN=304;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:20:22:6:66,6,0:20:0:-64.93:64.93\n7\t141414080\t429954:1\tT\tT[7:141414383[\t52\tPASS\tEVDNC=ASSMB;HOMSEQ=CCAAAAACATCATTTTT;MAPQ=60;MATEID=429954:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_141414001_141439001_66C;SPAN=303;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:17:20:2.1:52.8,2.1,0:17:0:-53.67:53.67\n7\t141414383\t429954:2\tC\t]7:141414080]C\t52\tPASS\tEVDNC=ASSMB;HOMSEQ=CCAAAAACATCATTTTT;MAPQ=60;MATEID=429954:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_141414001_141439001_66C;SPAN=303;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:17:20:2.1:52.8,2.1,0:17:0:-53.67:53.67\n7\t142060063\t430145:1\tT\t]7:142086470]T\t42\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=430145:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:142060063(-)-7:142086470(+)__7_142075501_142100501D;SPAN=26407;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:14:1:3.9:42.9,3.9,0:0:14:-42.91:42.91\n7\t142060773\t430146:1\tA\tA[7:142087080[\t26\tPASS\tDISC_MAPQ=59;EVDNC=DSCRD;IMPRECISE;MAPQ=59;MATEID=430146:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:142060773(+)-7:142087080(-)__7_142075501_142100501D;SPAN=26307;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:9:5:2.4:26.4,2.4,0:0:9:-26.41:26.41\n7\t142086470\t430145:2\tG\tG[7:142060063[\t42\tPASS\tDISC_MAPQ=58;EVDNC=DSCRD;IMPRECISE;MAPQ=58;MATEID=430145:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:142060063(-)-7:142086470(+)__7_142075501_142100501D;SPAN=26407;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:14:1:3.9:42.9,3.9,0:0:14:-42.91:42.91\n7\t142087080\t430146:2\tT\t]7:142060773]T\t26\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=430146:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:142060773(+)-7:142087080(-)__7_142075501_142100501D;SPAN=26307;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:9:5:2.4:26.4,2.4,0:0:9:-26.41:26.41\n7\t142578304\t430476:1\tA\tA[7:142617917[\t26\tPASS\tEVDNC=ASSMB;INSERTION=CCGCC;MAPQ=60;MATEID=430476:2;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_7_142614501_142639501_55C;SPAN=39613;SUBN=2;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:12:3.2:26.3,0,3.2:9:0:-27.29:27.29\n7\t142617917\t430476:2\tA\t]7:142578304]A\t26\tPASS\tEVDNC=ASSMB;INSERTION=CCGCC;MAPQ=60;MATEID=430476:1;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_7_142614501_142639501_55C;SPAN=39613;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:12:3.2:26.3,0,3.2:9:0:-27.29:27.29\n7\t144800296\t431053:1\tA\tA]7:144860189]\t23\tPASS\tDISC_MAPQ=59;EVDNC=DSCRD;IMPRECISE;MAPQ=59;MATEID=431053:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:144800296(+)-7:144860189(+)__7_144844001_144869001D;SPAN=59893;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:12:6.5:23,0,6.5:0:8:-23.49:23.49\n7\t144860189\t431053:2\tG\tG]7:144800296]\t23\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=431053:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:144800296(+)-7:144860189(+)__7_144844001_144869001D;SPAN=59893;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:12:6.5:23,0,6.5:0:8:-23.49:23.49\n7\t146423113\t431501:1\tT\tT[7:146423454[\t35\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;INSERTION=AGCCATGGAAGA;MAPQ=60;MATEID=431501:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_146412001_146437001_3C;SPAN=341;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:28:35:35,0,35:9:6:-35.04:35.04\n7\t146423113\t431502:1\tT\tT[7:146423476[\t17\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;INSERTION=AGCCATGGAAGATTTTAGAAGTGTGAAAAAAAAA;MAPQ=60;MATEID=431502:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_146412001_146437001_14C;SPAN=363;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:33:17.3:17.3,0,63.5:4:6:-17.13:18.75\n7\t146423454\t431501:2\tT\t]7:146423113]T\t35\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;INSERTION=AGCCATGGAAGA;MAPQ=60;MATEID=431501:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_146412001_146437001_3C;SPAN=341;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:28:35:35,0,35:9:6:-35.04:35.04\n7\t146423476\t431502:2\tA\t]7:146423113]A\t17\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;INSERTION=AGCCATGGAAGATTTTAGAAGTGTGAAAAAAAAA;MAPQ=60;MATEID=431502:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_146412001_146437001_14C;SPAN=363;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:33:17.3:17.3,0,63.5:4:6:-17.13:18.75\n7\t146650871\t431567:1\tA\t]7:146657869]A\t34\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AACA;MAPQ=60;MATEID=431567:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_7_146657001_146682001_164C;SPAN=6998;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:20:14.3:34.1,0,14.3:9:5:-34.32:34.32\n7\t146657869\t431567:2\tA\tA[7:146650871[\t34\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AACA;MAPQ=60;MATEID=431567:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_7_146657001_146682001_164C;SPAN=6998;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:20:14.3:34.1,0,14.3:9:5:-34.32:34.32\n7\t147118431\t431713:1\tA\t]7:147118535]A\t64\tPASS\tEVDNC=ASSMB;HOMSEQ=ACTTT;MAPQ=60;MATEID=431713:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_7_147098001_147123001_44C;SPAN=104;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:24:53:64.4:64.4,0,67.7:24:0:-64.33:64.34\n7\t147118535\t431713:2\tT\tT[7:147118431[\t64\tPASS\tEVDNC=ASSMB;HOMSEQ=ACTTT;MAPQ=60;MATEID=431713:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_7_147098001_147123001_44C;SPAN=104;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:24:53:64.4:64.4,0,67.7:24:0:-64.33:64.34\n7\t147979998\t432064:1\tC\tC[7:147981158[\t26\tPASS\tEVDNC=ASSMB;HOMSEQ=AGC;MAPQ=60;MATEID=432064:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_147980001_148005001_24C;SPAN=1160;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:22:26.9:26.9,0,26.9:10:0:-26.83:26.83\n7\t147981158\t432064:2\tA\t]7:147979998]A\t26\tPASS\tEVDNC=ASSMB;HOMSEQ=AGC;MAPQ=60;MATEID=432064:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_147980001_148005001_24C;SPAN=1160;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:22:26.9:26.9,0,26.9:10:0:-26.83:26.83\n7\t148375877\t432209:1\tT\tT[7:148379231[\t59\tPASS\tDISC_MAPQ=52;EVDNC=DSCRD;IMPRECISE;MAPQ=52;MATEID=432209:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:148375877(+)-7:148379231(-)__7_148372001_148397001D;SPAN=3354;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:20:5:5.4:59.4,5.4,0:0:20:-59.41:59.41\n7\t148379231\t432209:2\tT\t]7:148375877]T\t59\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=432209:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:148375877(+)-7:148379231(-)__7_148372001_148397001D;SPAN=3354;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:20:5:5.4:59.4,5.4,0:0:20:-59.41:59.41\n7\t149121088\t432449:1\tT\tT[7:149121402[\t74\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;INSERTION=C;MAPQ=60;MATEID=432449:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_149107001_149132001_6C;SPAN=314;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:25:30:1.4:74,0,1.4:20:8:-78.37:78.37\n7\t149121402\t432449:2\tT\t]7:149121088]T\t74\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;INSERTION=C;MAPQ=60;MATEID=432449:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_149107001_149132001_6C;SPAN=314;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:25:30:1.4:74,0,1.4:20:8:-78.37:78.37\n7\t151346416\t433173:1\tT\tT[7:151349025[\t16\tPASS\tEVDNC=ASSMB;HOMSEQ=CCTTT;MAPQ=60;MATEID=433173:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_151336501_151361501_4C;SPAN=2609;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:7:23:16.7:16.7,0,39.8:7:0:-16.64:17.22\n7\t151349025\t433173:2\tC\t]7:151346416]C\t16\tPASS\tEVDNC=ASSMB;HOMSEQ=CCTTT;MAPQ=60;MATEID=433173:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_151336501_151361501_4C;SPAN=2609;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:7:23:16.7:16.7,0,39.8:7:0:-16.64:17.22\n7\t152548284\t433615:1\tC\tC[7:152549219[\t72\tPASS\tEVDNC=ASSMB;HOMSEQ=CCTGTAATCCCAGCACTTTGGGAGGCC;MAPQ=60;MATEID=433615:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_7_152537001_152562001_60C;SPAN=935;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:24:14:6.6:72.6,6.6,0:24:0:-72.62:72.62\n7\t152549219\t433615:2\tC\t]7:152548284]C\t72\tPASS\tEVDNC=ASSMB;HOMSEQ=CCTGTAATCCCAGCACTTTGGGAGGCC;MAPQ=60;MATEID=433615:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_7_152537001_152562001_60C;SPAN=935;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:24:14:6.6:72.6,6.6,0:24:0:-72.62:72.62\n7\t152555315\t433617:1\tT\t]7:152557061]T\t18\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TGCTGGGATTACAGGCGTGAGCCACTGCGCCTGGCCAA;MAPQ=60;MATEID=433617:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_7_152537001_152562001_37C;SPAN=1746;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:27:18.8:18.8,0,48.5:6:3:-18.82:19.57\n7\t152557061\t433617:2\tA\tA[7:152555315[\t18\tPASS\tDISC_MAPQ=49;EVDNC=ASDIS;HOMSEQ=TGCTGGGATTACAGGCGTGAGCCACTGCGCCTGGCCAA;MAPQ=60;MATEID=433617:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_7_152537001_152562001_37C;SPAN=1746;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:27:18.8:18.8,0,48.5:6:3:-18.82:19.57\n7\t152584618\t433637:1\tA\tA[7:152587221[\t56\tPASS\tEVDNC=ASSMB;HOMSEQ=CACATGTTTTA;MAPQ=60;MATEID=433637:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_152586001_152611001_2C;SPAN=2603;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:19:11:5.1:56.1,5.1,0:19:0:-56.11:56.11\n7\t152587221\t433637:2\tC\t]7:152584618]C\t56\tPASS\tEVDNC=ASSMB;HOMSEQ=CACATGTTTTA;MAPQ=60;MATEID=433637:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_152586001_152611001_2C;SPAN=2603;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:19:11:5.1:56.1,5.1,0:19:0:-56.11:56.11\n7\t152722328\t433703:1\tT\tT[7:152722631[\t46\tPASS\tEVDNC=ASSMB;HOMSEQ=GGATCACTACTTTT;MAPQ=60;MATEID=433703:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_152708501_152733501_91C;SPAN=303;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:15:18:1.5:46.2,1.5,0:15:0:-47.02:47.02\n7\t152722631\t433703:2\tG\t]7:152722328]G\t46\tPASS\tEVDNC=ASSMB;HOMSEQ=GGATCACTACTTTT;MAPQ=60;MATEID=433703:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_152708501_152733501_91C;SPAN=303;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:15:18:1.5:46.2,1.5,0:15:0:-47.02:47.02\n7\t153011383\t433769:1\tA\tA[7:153011761[\t28\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=433769:2;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_7_153002501_153027501_39C;SPAN=378;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:29:28.1:28.1,0,44.6:11:0:-28.16:28.37\n7\t153011761\t433769:2\tT\t]7:153011383]T\t28\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=433769:1;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_7_153002501_153027501_39C;SPAN=378;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:29:28.1:28.1,0,44.6:11:0:-28.16:28.37\n7\t153613053\t434011:1\tC\tC[7:153613733[\t75\tPASS\tEVDNC=ASSMB;HOMSEQ=AAAACTATAAC;MAPQ=60;MATEID=434011:2;MATENM=2;NM=9;NUMPARTS=2;SCTG=c_7_153590501_153615501_41C;SPAN=680;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:25:15:6.9:75.9,6.9,0:25:0:-75.92:75.92\n7\t153613733\t434011:2\tA\t]7:153613053]A\t75\tPASS\tEVDNC=ASSMB;HOMSEQ=AAAACTATAAC;MAPQ=60;MATEID=434011:1;MATENM=9;NM=2;NUMPARTS=2;SCTG=c_7_153590501_153615501_41C;SPAN=680;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:25:15:6.9:75.9,6.9,0:25:0:-75.92:75.92\n7\t154456858\t434314:1\tT\tT[7:154457985[\t62\tPASS\tDISC_MAPQ=56;EVDNC=DSCRD;IMPRECISE;MAPQ=56;MATEID=434314:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:154456858(+)-7:154457985(-)__7_154448001_154473001D;SPAN=1127;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:21:13:5.7:62.7,5.7,0:0:21:-62.72:62.72\n7\t154457985\t434314:2\tA\t]7:154456858]A\t62\tPASS\tDISC_MAPQ=56;EVDNC=DSCRD;IMPRECISE;MAPQ=56;MATEID=434314:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:154456858(+)-7:154457985(-)__7_154448001_154473001D;SPAN=1127;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:21:13:5.7:62.7,5.7,0:0:21:-62.72:62.72\n7\t154600273\t434395:1\tA\tA[7:154608021[\t72\tPASS\tDISC_MAPQ=53;EVDNC=ASDIS;HOMSEQ=CCAGGCTGGAGTACAGTGGCACAATCTCAGCTCACTGCAAGCTCTGCCTCCCGGGTTCAAGCAATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGATTACAGGCA;MAPQ=60;MATEID=434395:2;MATENM=18;NM=6;NUMPARTS=2;SCTG=c_7_154595001_154620001_21C;SPAN=7748;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:24:3:6.6:72.6,6.6,0:6:22:-72.62:72.62\n7\t154608021\t434395:2\tC\t]7:154600273]C\t72\tPASS\tDISC_MAPQ=42;EVDNC=ASDIS;HOMSEQ=CCAGGCTGGAGTACAGTGGCACAATCTCAGCTCACTGCAAGCTCTGCCTCCCGGGTTCAAGCAATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGATTACAGGCA;MAPQ=60;MATEID=434395:1;MATENM=6;NM=18;NUMPARTS=2;SCTG=c_7_154595001_154620001_21C;SPAN=7748;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:24:3:6.6:72.6,6.6,0:6:22:-72.62:72.62\n7\t155084843\t434580:1\tC\t]7:155088917]C\t46\tPASS\tEVDNC=ASSMB;HOMSEQ=C;MAPQ=60;MATEID=434580:2;MATENM=0;NM=3;NUMPARTS=2;SCTG=c_7_155085001_155110001_4C;SPAN=4074;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:15:12:4.2:46.2,4.2,0:15:0:-46.21:46.21\n7\t155085280\t434583:1\tG\tG[7:155088918[\t50\tPASS\tEVDNC=ASSMB;INSERTION=CTTAT;MAPQ=60;MATEID=434583:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_7_155085001_155110001_15C;SPAN=3638;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:18:34:33.5:50,0,33.5:18:0:-49.98:49.98\n7\t155088917\t434580:2\tC\tC[7:155084843[\t46\tPASS\tEVDNC=ASSMB;HOMSEQ=C;MAPQ=60;MATEID=434580:1;MATENM=3;NM=0;NUMPARTS=2;SCTG=c_7_155085001_155110001_4C;SPAN=4074;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:15:12:4.2:46.2,4.2,0:15:0:-46.21:46.21\n7\t155088918\t434583:2\tT\t]7:155085280]T\t50\tPASS\tEVDNC=ASSMB;INSERTION=CTTAT;MAPQ=60;MATEID=434583:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_7_155085001_155110001_15C;SPAN=3638;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:18:34:33.5:50,0,33.5:18:0:-49.98:49.98\n7\t155150222\t434599:1\tA\tA[7:155150535[\t42\tPASS\tEVDNC=ASSMB;HOMSEQ=AAGAAAAGTGGGTGCAA;MAPQ=60;MATEID=434599:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_7_155134001_155159001_115C;SPAN=313;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:14:17:1.2:42.9,1.2,0:14:0:-43.71:43.71\n7\t155150535\t434599:2\tA\t]7:155150222]A\t42\tPASS\tEVDNC=ASSMB;HOMSEQ=AAGAAAAGTGGGTGCAA;MAPQ=60;MATEID=434599:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_7_155134001_155159001_115C;SPAN=313;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:14:17:1.2:42.9,1.2,0:14:0:-43.71:43.71\n7\t155891399\t435004:1\tA\t]Un_JTFH01000557v1_decoy:1459]A\t29\tPASS\tEVDNC=ASSMB;HOMSEQ=AGGTGGTGGTGGC;MAPQ=60;MATEID=435004:2;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_7_155869001_155894001_89C;SPAN=-1;SUBN=5;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:9:10:2.7:29.7,2.7,0:9:0:-29.08:29.08\n7\t155932667\t435025:1\tG\tG[7:155932869[\t49\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=ATGTGTG;MAPQ=60;MATEID=435025:2;MATENM=5;NM=0;NUMPARTS=2;SCTG=c_7_155918001_155943001_73C;SPAN=202;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:17:24:9.8:49.4,0,9.8:12:6:-50.74:50.74\n7\t155932869\t435025:2\tA\t]7:155932667]A\t49\tPASS\tDISC_MAPQ=45;EVDNC=ASDIS;HOMSEQ=ATGTGTG;MAPQ=60;MATEID=435025:1;MATENM=0;NM=5;NUMPARTS=2;SCTG=c_7_155918001_155943001_73C;SPAN=202;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:17:24:9.8:49.4,0,9.8:12:6:-50.74:50.74\n7\t156957886\t435424:1\tT\t]7:156959338]T\t59\tPASS\tDISC_MAPQ=52;EVDNC=ASDIS;HOMSEQ=TTG;MAPQ=60;MATEID=435424:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_7_156947001_156972001_74C;SPAN=1452;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:20:25:2.9:59,0,2.9:13:13:-61.85:61.85\n7\t156958050\t435425:1\tC\tC[7:156959338[\t30\tPASS\tEVDNC=ASSMB;INSERTION=A;MAPQ=60;MATEID=435425:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_7_156947001_156972001_77C;SPAN=1288;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:32:30.8:30.8,0,47.3:12:0:-30.62:30.87\n7\t156959338\t435424:2\tG\tG[7:156957886[\t59\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TTG;MAPQ=60;MATEID=435424:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_7_156947001_156972001_74C;SPAN=1452;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:20:25:2.9:59,0,2.9:13:13:-61.85:61.85\n7\t156959338\t435425:2\tG\t]7:156958050]G\t30\tPASS\tEVDNC=ASSMB;INSERTION=A;MAPQ=60;MATEID=435425:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_7_156947001_156972001_77C;SPAN=1288;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:32:30.8:30.8,0,47.3:12:0:-30.62:30.87\n7\t158410836\t436263:1\tT\t]7:158410940]T\t35\tPASS\tEVDNC=ASSMB;HOMSEQ=TGGGAGGCCCC;MAPQ=60;MATEID=436263:2;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_7_158392501_158417501_21C;SPAN=104;SUBN=2;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:40:35:35,0,64.7:14:0:-34.97:35.49\n7\t158410940\t436263:2\tC\tC[7:158410836[\t35\tPASS\tEVDNC=ASSMB;HOMSEQ=TGGGAGGCCCC;MAPQ=60;MATEID=436263:1;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_7_158392501_158417501_21C;SPAN=104;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:40:35:35,0,64.7:14:0:-34.97:35.49\n7\t158454926\t436501:1\tG\t]7:158848272]G\t19\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=436501:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_158833501_158858501_32C;SPAN=393346;SUBN=1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:24:19.7:19.7,0,39.5:8:0:-19.66:20.07\n7\t158848272\t436501:2\tC\tC[7:158454926[\t19\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=436501:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_158833501_158858501_32C;SPAN=393346;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:24:19.7:19.7,0,39.5:8:0:-19.66:20.07\n8\t245406\t485861:1\tG\t]9:11384325]G\t25\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=GTG;MAPQ=60;MATEID=485861:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_11368001_11393001_5C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:17:15.2:25.1,0,15.2:4:6:-24.99:24.99\n8\t644397\t436892:1\tG\tG[8:649415[\t52\tPASS\tEVDNC=ASSMB;INSERTION=CAA;MAPQ=60;MATEID=436892:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_8_637001_662001_88C;SPAN=5018;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:18:9:4.8:52.8,4.8,0:18:0:-52.81:52.81\n8\t649415\t436892:2\tG\t]8:644397]G\t52\tPASS\tEVDNC=ASSMB;INSERTION=CAA;MAPQ=60;MATEID=436892:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_8_637001_662001_88C;SPAN=5018;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:18:9:4.8:52.8,4.8,0:18:0:-52.81:52.81\n8\t1724902\t13008:2\tA\t[1:53954234[A\t26\tPASS\tDISC_MAPQ=44;EVDNC=TSI_L;HOMSEQ=A;INSERTION=AGCCCAGAGACAGAGCTTTCAAGGTGCCTGCTCAGTTTATGAGCCAAGTTTCTATTCTTTTCTGCATGTGTTT;MAPQ=60;MATEID=13008:1;MATENM=0;NM=0;NUMPARTS=3;SCTG=c_1_53949001_53974001_174C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:16:93:26.9:26.9,0,205.1:16:3:-26.67:34.81\n8\t2085602\t437510:1\tC\tC[8:2086130[\t62\tPASS\tDISC_MAPQ=60;EVDNC=TSI_L;HOMSEQ=CACTGTCGTGATCTCCGCGTGGCCCCCCACTGTTGTGATCTCTGCGTGGCCCCACTGTCGTGATCTCTGCGTGGCCCCACTGTTGTGATCTTTGCGTGGCCCCACTGTC;MAPQ=60;MATEID=437510:2;MATENM=31;NM=4;NUMPARTS=3;SCTG=c_8_2082501_2107501_114C;SPAN=528;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:21:4:5.7:62.7,5.7,0:3:18:-62.72:62.72\n8\t2086130\t437510:2\tC\t]8:2085602]C\t62\tPASS\tDISC_MAPQ=16;EVDNC=TSI_L;HOMSEQ=CACTGTCGTGATCTCCGCGTGGCCCCCCACTGTTGTGATCTCTGCGTGGCCCCACTGTCGTGATCTCTGCGTGGCCCCACTGTTGTGATCTTTGCGTGGCCCCACTGTC;MAPQ=60;MATEID=437510:1;MATENM=4;NM=31;NUMPARTS=3;SCTG=c_8_2082501_2107501_114C;SPAN=528;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:21:4:5.7:62.7,5.7,0:3:18:-62.72:62.72\n8\t3115324\t437859:1\tC\t]8:3153710]C\t17\tPASS\tEVDNC=ASSMB;HOMSEQ=CCCAGG;MAPQ=60;MATEID=437859:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_3136001_3161001_36C;SPAN=38386;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:7:21:17.3:17.3,0,33.8:7:0:-17.2:17.56\n8\t3153710\t437859:2\tG\tG[8:3115324[\t17\tPASS\tEVDNC=ASSMB;HOMSEQ=CCCAGG;MAPQ=60;MATEID=437859:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_3136001_3161001_36C;SPAN=38386;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:7:21:17.3:17.3,0,33.8:7:0:-17.2:17.56\n8\t3926369\t438321:1\tC\tC[8:3927626[\t44\tPASS\tEVDNC=ASSMB;INSERTION=C;MAPQ=60;MATEID=438321:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_8_3920001_3945001_99C;SPAN=1257;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:15:20:4.4:44,0,4.4:15:0:-45.49:45.49\n8\t3927626\t438321:2\tC\t]8:3926369]C\t44\tPASS\tEVDNC=ASSMB;INSERTION=C;MAPQ=60;MATEID=438321:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_8_3920001_3945001_99C;SPAN=1257;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:15:20:4.4:44,0,4.4:15:0:-45.49:45.49\n8\t4137359\t438395:1\tT\tT[8:4137824[\t44\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;INSERTION=ATGTCAC;MAPQ=60;MATEID=438395:2;MATENM=7;NM=0;NUMPARTS=2;SCTG=c_8_4116001_4141001_71C;SPAN=465;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:15:20:4.4:44,0,4.4:12:6:-45.49:45.49\n8\t4137824\t438395:2\tA\t]8:4137359]A\t44\tPASS\tDISC_MAPQ=48;EVDNC=ASDIS;INSERTION=ATGTCAC;MAPQ=60;MATEID=438395:1;MATENM=0;NM=7;NUMPARTS=2;SCTG=c_8_4116001_4141001_71C;SPAN=465;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:15:20:4.4:44,0,4.4:12:6:-45.49:45.49\n8\t4265362\t438458:1\tT\tT[8:4267451[\t31\tPASS\tEVDNC=ASSMB;INSERTION=TACATAATAATAT;MAPQ=60;MATEID=438458:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_8_4263001_4288001_41C;SPAN=2089;SUBN=5;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:30:31.1:31.1,0,44.3:12:0:-31.18:31.31\n8\t4267451\t438458:2\tA\t]8:4265362]A\t31\tPASS\tEVDNC=ASSMB;INSERTION=TACATAATAATAT;MAPQ=60;MATEID=438458:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_8_4263001_4288001_41C;SPAN=2089;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:30:31.1:31.1,0,44.3:12:0:-31.18:31.31\n8\t4686301\t438597:1\tT\tT[8:4686729[\t49\tPASS\tEVDNC=ASSMB;HOMSEQ=CAT;MAPQ=60;MATEID=438597:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_4679501_4704501_79C;SPAN=428;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:17:17:4.5:49.5,4.5,0:17:0:-49.51:49.51\n8\t4686729\t438597:2\tC\t]8:4686301]C\t49\tPASS\tEVDNC=ASSMB;HOMSEQ=CAT;MAPQ=60;MATEID=438597:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_4679501_4704501_79C;SPAN=428;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:17:17:4.5:49.5,4.5,0:17:0:-49.51:49.51\n8\t5083713\t438785:1\tA\tA[8:5083999[\t58\tPASS\tEVDNC=ASSMB;HOMSEQ=AAGATGGAAGTA;MAPQ=60;MATEID=438785:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_8_5071501_5096501_19C;SPAN=286;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:20:27:8.9:58.4,0,8.9:20:0:-60.44:60.44\n8\t5083999\t438785:2\tA\t]8:5083713]A\t58\tPASS\tEVDNC=ASSMB;HOMSEQ=AAGATGGAAGTA;MAPQ=60;MATEID=438785:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_8_5071501_5096501_19C;SPAN=286;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:20:27:8.9:58.4,0,8.9:20:0:-60.44:60.44\n8\t5737994\t439044:1\tC\tC[8:5748258[\t21\tPASS\tEVDNC=ASSMB;INSERTION=AC;MAPQ=60;MATEID=439044:2;MATENM=1;NM=2;NUMPARTS=2;SCTG=c_8_5733001_5758001_8C;SPAN=10264;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:28:21.8:21.8,0,48.2:9:0:-21.84:22.4\n8\t5748258\t439044:2\tT\t]8:5737994]T\t21\tPASS\tEVDNC=ASSMB;INSERTION=AC;MAPQ=60;MATEID=439044:1;MATENM=2;NM=1;NUMPARTS=2;SCTG=c_8_5733001_5758001_8C;SPAN=10264;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:28:21.8:21.8,0,48.2:9:0:-21.84:22.4\n8\t5890665\t439087:1\tA\tA[8:5890984[\t38\tPASS\tEVDNC=ASSMB;HOMSEQ=AAAAATGGAGA;MAPQ=60;MATEID=439087:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_5880001_5905001_64C;SPAN=319;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:27:28.7:38.6,0,28.7:14:0:-38.69:38.69\n8\t5890984\t439087:2\tA\t]8:5890665]A\t38\tPASS\tEVDNC=ASSMB;HOMSEQ=AAAAATGGAGA;MAPQ=60;MATEID=439087:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_5880001_5905001_64C;SPAN=319;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:27:28.7:38.6,0,28.7:14:0:-38.69:38.69\n8\t6678940\t439496:2\tA\t[1:59491056[A\t42\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAA;MAPQ=60;MATEID=439496:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_6664001_6689001_35C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:14:6:3.9:42.9,3.9,0:12:2:-42.91:42.91\n8\t6933349\t439600:1\tA\tA[8:6933672[\t99\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;INSERTION=GCTGCTTAGGAAAAACAGTG;MAPQ=60;MATEID=439600:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_8_6933501_6958501_69C;SPAN=323;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:33:7:9:99,9,0:24:12:-99.02:99.02\n8\t6933672\t439600:2\tC\t]8:6933349]C\t99\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;INSERTION=GCTGCTTAGGAAAAACAGTG;MAPQ=60;MATEID=439600:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_8_6933501_6958501_69C;SPAN=323;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:33:7:9:99,9,0:24:12:-99.02:99.02\n8\t7134147\t439657:1\tG\tG[8:7137881[\t52\tPASS\tEVDNC=ASSMB;HOMSEQ=TGCCTGG;MAPQ=59;MATEID=439657:2;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_8_7129501_7154501_89C;SPAN=3734;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:17:18:4.8:52.8,4.8,0:17:0:-52.81:52.81\n8\t7137881\t439657:2\tT\t]8:7134147]T\t52\tPASS\tEVDNC=ASSMB;HOMSEQ=TGCCTGG;MAPQ=60;MATEID=439657:1;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_8_7129501_7154501_89C;SPAN=3734;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:17:18:4.8:52.8,4.8,0:17:0:-52.81:52.81\n8\t11388052\t441018:1\tG\tG[8:11389699[\t72\tPASS\tEVDNC=ASSMB;HOMSEQ=AAG;MAPQ=60;MATEID=441018:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_11368001_11393001_58C;SPAN=1647;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:24:21:6.6:72.6,6.6,0:24:0:-72.62:72.62\n8\t11389699\t441018:2\tA\t]8:11388052]A\t72\tPASS\tEVDNC=ASSMB;HOMSEQ=AAG;MAPQ=60;MATEID=441018:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_11368001_11393001_58C;SPAN=1647;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:24:21:6.6:72.6,6.6,0:24:0:-72.62:72.62\n8\t11930717\t441301:1\tA\t]8:12035858]A\t69\tPASS\tDISC_MAPQ=50;EVDNC=DSCRD;IMPRECISE;MAPQ=50;MATEID=441301:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=8:11930717(-)-8:12035858(+)__8_12029501_12054501D;SPAN=105141;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:23:14:6.3:69.3,6.3,0:0:23:-69.32:69.32\n8\t12035858\t441301:2\tT\tT[8:11930717[\t69\tPASS\tDISC_MAPQ=50;EVDNC=DSCRD;IMPRECISE;MAPQ=50;MATEID=441301:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=8:11930717(-)-8:12035858(+)__8_12029501_12054501D;SPAN=105141;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:23:14:6.3:69.3,6.3,0:0:23:-69.32:69.32\n8\t12570090\t441563:1\tA\t]8:12628231]A\t26\tPASS\tDISC_MAPQ=37;EVDNC=DSCRD;IMPRECISE;MAPQ=37;MATEID=441563:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=8:12570090(-)-8:12628231(+)__8_12568501_12593501D;SPAN=58141;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:24:26.3:26.3,0,32.9:0:10:-26.26:26.32\n8\t12570404\t441566:1\tA\tA[8:12575326[\t39\tPASS\tDISC_MAPQ=40;EVDNC=DSCRD;IMPRECISE;MAPQ=40;MATEID=441566:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=8:12570404(+)-8:12575326(-)__8_12568501_12593501D;SPAN=4922;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:17:61:39.2:39.2,0,111.8:0:17:-38.97:41.04\n8\t12575326\t441566:2\tT\t]8:12570404]T\t39\tPASS\tDISC_MAPQ=36;EVDNC=DSCRD;IMPRECISE;MAPQ=36;MATEID=441566:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=8:12570404(+)-8:12575326(-)__8_12568501_12593501D;SPAN=4922;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:17:61:39.2:39.2,0,111.8:0:17:-38.97:41.04\n8\t12628231\t441563:2\tT\tT[8:12570090[\t26\tPASS\tDISC_MAPQ=25;EVDNC=DSCRD;IMPRECISE;MAPQ=25;MATEID=441563:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=8:12570090(-)-8:12628231(+)__8_12568501_12593501D;SPAN=58141;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:24:26.3:26.3,0,32.9:0:10:-26.26:26.32\n8\t13312080\t441914:1\tG\tG[8:13312384[\t2\tPASS\tEVDNC=ASSMB;HOMSEQ=AAAAATAATTTCTTTAG;MAPQ=60;MATEID=441914:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_13303501_13328501_75C;SPAN=304;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:5:51:2.3:2.3,0,124.4:5:0:-2.169:9.566\n8\t13312384\t441914:2\tA\t]8:13312080]A\t2\tPASS\tEVDNC=ASSMB;HOMSEQ=AAAAATAATTTCTTTAG;MAPQ=60;MATEID=441914:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_13303501_13328501_75C;SPAN=304;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:5:51:2.3:2.3,0,124.4:5:0:-2.169:9.566\n8\t14101377\t442359:1\tG\t]8:14101564]G\t35\tPASS\tEVDNC=ASSMB;HOMSEQ=G;MAPQ=60;MATEID=442359:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_14087501_14112501_40C;SPAN=187;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:40:35:35,0,64.7:14:0:-34.97:35.49\n8\t14101564\t442359:2\tG\tG[8:14101377[\t35\tPASS\tEVDNC=ASSMB;HOMSEQ=G;MAPQ=60;MATEID=442359:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_14087501_14112501_40C;SPAN=187;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:40:35:35,0,64.7:14:0:-34.97:35.49\n8\t15143770\t442750:1\tT\tT[8:15144078[\t92\tPASS\tEVDNC=ASSMB;HOMSEQ=CTATTATTACCTT;MAPQ=60;MATEID=442750:2;MATENM=0;NM=5;NUMPARTS=2;SCTG=c_8_15141001_15166001_10C;SPAN=308;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:31:20:8.4:92.4,8.4,0:31:0:-92.42:92.42\n8\t15144078\t442750:2\tC\t]8:15143770]C\t92\tPASS\tEVDNC=ASSMB;HOMSEQ=CTATTATTACCTT;MAPQ=60;MATEID=442750:1;MATENM=5;NM=0;NUMPARTS=2;SCTG=c_8_15141001_15166001_10C;SPAN=308;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:31:20:8.4:92.4,8.4,0:31:0:-92.42:92.42\n8\t15965406\t443106:1\tG\tG[8:15979503[\t46\tPASS\tEVDNC=ASSMB;HOMSEQ=AG;MAPQ=60;MATEID=443106:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_15974001_15999001_23C;SPAN=14097;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:15:15:4.2:46.2,4.2,0:15:0:-46.21:46.21\n8\t15979503\t443106:2\tA\t]8:15965406]A\t46\tPASS\tEVDNC=ASSMB;HOMSEQ=AG;MAPQ=60;MATEID=443106:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_15974001_15999001_23C;SPAN=14097;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:15:15:4.2:46.2,4.2,0:15:0:-46.21:46.21\n8\t16176924\t443194:1\tG\t]8:16188715]G\t23\tPASS\tDISC_MAPQ=56;EVDNC=DSCRD;IMPRECISE;MAPQ=56;MATEID=443194:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=8:16176924(-)-8:16188715(+)__8_16170001_16195001D;SPAN=11791;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:35:23.3:23.3,0,62.9:0:10:-23.17:24.27\n8\t16188715\t443194:2\tC\tC[8:16176924[\t23\tPASS\tDISC_MAPQ=58;EVDNC=DSCRD;IMPRECISE;MAPQ=58;MATEID=443194:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=8:16176924(-)-8:16188715(+)__8_16170001_16195001D;SPAN=11791;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:35:23.3:23.3,0,62.9:0:10:-23.17:24.27\n8\t16297189\t443263:1\tT\t]8:16297276]T\t41\tPASS\tEVDNC=ASSMB;HOMSEQ=TTACATTTAAATGT;MAPQ=56;MATEID=443263:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_16292501_16317501_11C;SPAN=87;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:16:42:41:41,0,64.1:16:0:-41.01:41.3\n8\t16297276\t443263:2\tT\tT[8:16297189[\t41\tPASS\tEVDNC=ASSMB;HOMSEQ=TTACATTTAAATGT;MAPQ=60;MATEID=443263:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_16292501_16317501_11C;SPAN=87;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:16:42:41:41,0,64.1:16:0:-41.01:41.3\n8\t16964371\t443510:1\tG\tG[8:16964741[\t59\tPASS\tEVDNC=ASSMB;HOMSEQ=G;MAPQ=60;MATEID=443510:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_16954001_16979001_86C;SPAN=370;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:20:20:5.4:59.4,5.4,0:20:0:-59.41:59.41\n8\t16964741\t443510:2\tG\t]8:16964371]G\t59\tPASS\tEVDNC=ASSMB;HOMSEQ=G;MAPQ=60;MATEID=443510:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_16954001_16979001_86C;SPAN=370;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:20:20:5.4:59.4,5.4,0:20:0:-59.41:59.41\n8\t17104713\t443545:1\tC\tC[8:17105020[\t23\tPASS\tEVDNC=ASSMB;HOMSEQ=AAAAATTCCAGATATC;MAPQ=60;MATEID=443545:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_17101001_17126001_12C;SPAN=307;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:23:23.3:23.3,0,33.2:9:0:-23.24:23.37\n8\t17105020\t443545:2\tA\t]8:17104713]A\t23\tPASS\tEVDNC=ASSMB;HOMSEQ=AAAAATTCCAGATATC;MAPQ=60;MATEID=443545:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_17101001_17126001_12C;SPAN=307;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:23:23.3:23.3,0,33.2:9:0:-23.24:23.37\n8\t17408106\t443658:1\tA\tA[8:17408417[\t66\tPASS\tEVDNC=ASSMB;HOMSEQ=AAGAACATCATGGA;MAPQ=60;MATEID=443658:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_17395001_17420001_29C;SPAN=311;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:22:17:6:66,6,0:22:0:-66.02:66.02\n8\t17408417\t443658:2\tA\t]8:17408106]A\t66\tPASS\tEVDNC=ASSMB;HOMSEQ=AAGAACATCATGGA;MAPQ=60;MATEID=443658:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_17395001_17420001_29C;SPAN=311;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:22:17:6:66,6,0:22:0:-66.02:66.02\n8\t18594144\t444074:1\tT\tT[8:18594341[\t9\tPASS\tEVDNC=ASSMB;HOMSEQ=ATATATATT;MAPQ=60;MATEID=444074:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_8_18571001_18596001_54C;SPAN=197;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:4:1:0.9:9.9,0.9,0:4:0:-9.903:9.903\n8\t18594341\t444074:2\tA\t]8:18594144]A\t9\tPASS\tEVDNC=ASSMB;HOMSEQ=ATATATATT;MAPQ=60;MATEID=444074:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_8_18571001_18596001_54C;SPAN=197;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:4:1:0.9:9.9,0.9,0:4:0:-9.903:9.903\n8\t18597110\t444086:1\tC\tC[8:18598435[\t99\tPASS\tEVDNC=ASSMB;HOMSEQ=AAAAGGATC;MAPQ=60;MATEID=444086:2;MATENM=3;NM=2;NUMPARTS=2;SCTG=c_8_18595501_18620501_89C;SPAN=1325;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:36:26:9.9:108.9,9.9,0:36:0:-108.9:108.9\n8\t18598435\t444086:2\tA\t]8:18597110]A\t99\tPASS\tEVDNC=ASSMB;HOMSEQ=AAAAGGATC;MAPQ=60;MATEID=444086:1;MATENM=2;NM=3;NUMPARTS=2;SCTG=c_8_18595501_18620501_89C;SPAN=1325;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:36:26:9.9:108.9,9.9,0:36:0:-108.9:108.9\n8\t18793948\t444132:1\tC\tC[8:18794916[\t62\tPASS\tEVDNC=ASSMB;HOMSEQ=ATGAAGC;MAPQ=60;MATEID=444132:2;MATENM=4;NM=2;NUMPARTS=2;SCTG=c_8_18791501_18816501_13C;SPAN=968;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:21:13:5.7:62.7,5.7,0:21:0:-62.72:62.72\n8\t18794916\t444132:2\tA\t]8:18793948]A\t62\tPASS\tEVDNC=ASSMB;HOMSEQ=ATGAAGC;MAPQ=60;MATEID=444132:1;MATENM=2;NM=4;NUMPARTS=2;SCTG=c_8_18791501_18816501_13C;SPAN=968;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:21:13:5.7:62.7,5.7,0:21:0:-62.72:62.72\n8\t19865725\t444480:1\tA\t]8:19865798]A\t15\tPASS\tEVDNC=ASSMB;HOMSEQ=AGGAAGGAAAGAAA;MAPQ=60;MATEID=444480:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_8_19845001_19870001_47C;SPAN=73;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:38:15.8:15.8,0,78.5:8:0:-15.73:18.19\n8\t19865798\t444480:2\tA\tA[8:19865725[\t15\tPASS\tEVDNC=ASSMB;HOMSEQ=AGGAAGGAAAGAAA;MAPQ=60;MATEID=444480:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_8_19845001_19870001_47C;SPAN=73;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:38:15.8:15.8,0,78.5:8:0:-15.73:18.19\n8\t21085893\t444758:1\tC\tC[8:21086296[\t62\tPASS\tEVDNC=ASSMB;HOMSEQ=C;MAPQ=60;MATEID=444758:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_21070001_21095001_2C;SPAN=403;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:21:20:5.7:62.7,5.7,0:21:0:-62.72:62.72\n8\t21086296\t444758:2\tC\t]8:21085893]C\t62\tPASS\tEVDNC=ASSMB;HOMSEQ=C;MAPQ=60;MATEID=444758:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_21070001_21095001_2C;SPAN=403;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:21:20:5.7:62.7,5.7,0:21:0:-62.72:62.72\n8\t21517297\t444821:1\tC\t[Un_JTFH01000350v1_decoy:1[C\t66\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=444821:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_21511001_21536001_23C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:22:18:6:66,6,0:22:0:-66.02:66.02\n8\t21517297\t997407:1\tC\t[Un_JTFH01000350v1_decoy:1[C\t69\tPASS\tDISC_MAPQ=255;EVDNC=TSI_L;MAPQ=60;MATEID=997407:2;MATENM=0;NM=0;NUMPARTS=5;SCTG=c_1193_1_1954_0C;SPAN=-1;SUBN=4;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:23:7:6.3:69.3,6.3,0:23:0:-69.32:69.32\n8\t21766795\t1010911:1\tA\t]Un_JTFH01001939v1_decoy:2292]A\t36\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=1010911:2;MATENM=2;NM=1;NUMPARTS=2;SCTG=c_2782_1_2292_4C;SPAN=-1;SUBN=7;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:12:4:3.3:36.3,3.3,0:12:0:-36.31:36.31\n8\t21766797\t1010912:1\tA\tA[Un_JTFH01001939v1_decoy:1[\t62\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=1010912:2;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_2782_1_2292_7C;SPAN=-1;SUBN=6;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:21:6:5.7:62.7,5.7,0:21:0:-62.72:62.72\n8\t21766797\t444889:1\tA\tA[Un_JTFH01001939v1_decoy:1[\t66\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=444889:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_8_21756001_21781001_45C;SPAN=-1;SUBN=4;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:22:11:6:66,6,0:22:0:-66.02:66.02\n8\t22332116\t445121:1\tC\t]8:22500234]C\t38\tPASS\tDISC_MAPQ=53;EVDNC=ASDIS;MAPQ=60;MATEID=445121:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_22491001_22516001_10C;SPAN=168118;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:27:28.7:38.6,0,28.7:8:10:-38.69:38.69\n8\t22500234\t445121:2\tT\tT[8:22332116[\t38\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;MAPQ=60;MATEID=445121:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_22491001_22516001_10C;SPAN=168118;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:27:28.7:38.6,0,28.7:8:10:-38.69:38.69\n8\t25114919\t445971:1\tC\tC[8:25133429[\t72\tPASS\tEVDNC=ASSMB;HOMSEQ=AC;MAPQ=60;MATEID=445971:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_25112501_25137501_73C;SPAN=18510;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:24:17:6.6:72.6,6.6,0:24:0:-72.62:72.62\n8\t25133429\t445971:2\tA\t]8:25114919]A\t72\tPASS\tEVDNC=ASSMB;HOMSEQ=AC;MAPQ=60;MATEID=445971:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_25112501_25137501_73C;SPAN=18510;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:24:17:6.6:72.6,6.6,0:24:0:-72.62:72.62\n8\t25209169\t446016:1\tG\tG[8:25213137[\t36\tPASS\tEVDNC=ASSMB;HOMSEQ=GGCTCAG;MAPQ=60;MATEID=446016:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_25210501_25235501_34C;SPAN=3968;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:12:9:3.3:36.3,3.3,0:12:0:-36.31:36.31\n8\t25213137\t446016:2\tG\t]8:25209169]G\t36\tPASS\tEVDNC=ASSMB;HOMSEQ=GGCTCAG;MAPQ=60;MATEID=446016:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_25210501_25235501_34C;SPAN=3968;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:12:9:3.3:36.3,3.3,0:12:0:-36.31:36.31\n8\t25340917\t446063:1\tT\tT[8:25341712[\t18\tPASS\tEVDNC=ASSMB;HOMSEQ=AATT;MAPQ=60;MATEID=446063:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_25333001_25358001_15C;SPAN=795;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:29:18.2:18.2,0,54.5:8:0:-18.26:19.27\n8\t25341712\t446063:2\tA\t]8:25340917]A\t18\tPASS\tEVDNC=ASSMB;HOMSEQ=AATT;MAPQ=60;MATEID=446063:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_25333001_25358001_15C;SPAN=795;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:29:18.2:18.2,0,54.5:8:0:-18.26:19.27\n8\t28576446\t817809:1\tG\tG[17:81799230[\t36\tPASS\tDISC_MAPQ=55;EVDNC=DSCRD;IMPRECISE;MAPQ=55;MATEID=817809:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=8:28576446(+)-17:81799230(-)__17_81781001_81806001D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:12:2:3.3:36.3,3.3,0:0:12:-36.31:36.31\n8\t28650137\t447158:1\tA\t]8:28712090]A\t39\tPASS\tDISC_MAPQ=38;EVDNC=DSCRD;IMPRECISE;MAPQ=38;MATEID=447158:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=8:28650137(-)-8:28712090(+)__8_28689501_28714501D;SPAN=61953;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:12:13:3.6:39.6,3.6,0:0:12:-39.28:39.28\n8\t28712090\t447158:2\tG\tG[8:28650137[\t39\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=447158:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=8:28650137(-)-8:28712090(+)__8_28689501_28714501D;SPAN=61953;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:12:13:3.6:39.6,3.6,0:0:12:-39.28:39.28\n8\t29980022\t447488:1\tA\tA[8:29980770[\t32\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=447488:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_8_29963501_29988501_45C;SPAN=748;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:15:5.6:32,0,5.6:11:0:-33.15:33.15\n8\t29980770\t447488:2\tA\t]8:29980022]A\t32\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=447488:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_8_29963501_29988501_45C;SPAN=748;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:15:5.6:32,0,5.6:11:0:-33.15:33.15\n8\t32822491\t448497:1\tG\tG[8:32833744[\t59\tPASS\tEVDNC=ASSMB;HOMSEQ=CAGG;MAPQ=60;MATEID=448497:2;MATENM=0;NM=6;NUMPARTS=2;SCTG=c_8_32805501_32830501_21C;SPAN=11253;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:20:5:5.4:59.4,5.4,0:20:0:-59.41:59.41\n8\t32833744\t448497:2\tC\t]8:32822491]C\t59\tPASS\tEVDNC=ASSMB;HOMSEQ=CAGG;MAPQ=60;MATEID=448497:1;MATENM=6;NM=0;NUMPARTS=2;SCTG=c_8_32805501_32830501_21C;SPAN=11253;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:20:5:5.4:59.4,5.4,0:20:0:-59.41:59.41\n8\t35555406\t449149:1\tA\tA[12:52358976[\t26\tPASS\tDISC_MAPQ=53;EVDNC=DSCRD;IMPRECISE;MAPQ=53;MATEID=449149:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=8:35555406(+)-12:52358976(-)__8_35549501_35574501D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:9:8:2.4:26.4,2.4,0:0:9:-26.41:26.41\n8\t35961094\t449181:1\tT\t]8:35972220]T\t29\tPASS\tDISC_MAPQ=51;EVDNC=ASDIS;INSERTION=ATGATTC;MAPQ=60;MATEID=449181:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_35966001_35991001_0C;SPAN=11126;SUBN=1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:10:5:2.7:29.7,2.7,0:4:7:-29.71:29.71\n8\t35972220\t449181:2\tA\tA[8:35961094[\t29\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;INSERTION=ATGATTC;MAPQ=60;MATEID=449181:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_35966001_35991001_0C;SPAN=11126;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:10:5:2.7:29.7,2.7,0:4:7:-29.71:29.71\n8\t37645401\t449440:1\tG\t]Un_JTFH01000913v1_decoy:1045]G\t56\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=449440:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_37632001_37657001_23C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:19:12:5.1:56.1,5.1,0:19:0:-56.11:56.11\n8\t39096102\t449794:1\tA\tA[8:39096363[\t42\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;INSERTION=A;MAPQ=60;MATEID=449794:2;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_8_39077501_39102501_30C;SPAN=261;SUBN=2;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:14:13:3.9:42.9,3.9,0:10:4:-42.91:42.91\n8\t39096363\t449794:2\tT\t]8:39096102]T\t42\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;INSERTION=A;MAPQ=60;MATEID=449794:1;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_8_39077501_39102501_30C;SPAN=261;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:14:13:3.9:42.9,3.9,0:10:4:-42.91:42.91\n8\t39907811\t450065:1\tA\tA[8:39908128[\t27\tPASS\tEVDNC=ASSMB;HOMSEQ=AAGAAATAATATTTAA;MAPQ=60;MATEID=450065:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_39886001_39911001_16C;SPAN=317;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:20:20.9:27.5,0,20.9:10:0:-27.41:27.41\n8\t39908128\t450065:2\tA\t]8:39907811]A\t27\tPASS\tEVDNC=ASSMB;HOMSEQ=AAGAAATAATATTTAA;MAPQ=60;MATEID=450065:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_39886001_39911001_16C;SPAN=317;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:20:20.9:27.5,0,20.9:10:0:-27.41:27.41\n8\t40279424\t450329:1\tT\t]8:40531710]T\t36\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TG;MAPQ=60;MATEID=450329:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_40523001_40548001_104C;SPAN=252286;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:12:12:3.3:36.3,3.3,0:8:8:-36.31:36.31\n8\t40432188\t450269:1\tA\tA[8:40438679[\t46\tPASS\tEVDNC=ASSMB;HOMSEQ=AAAAAAATACACAGGA;MAPQ=60;MATEID=450269:2;MATENM=0;NM=3;NUMPARTS=2;SCTG=c_8_40425001_40450001_119C;SPAN=6491;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:15:15:4.2:46.2,4.2,0:15:0:-46.21:46.21\n8\t40438679\t450269:2\tA\t]8:40432188]A\t46\tPASS\tEVDNC=ASSMB;HOMSEQ=AAAAAAATACACAGGA;MAPQ=60;MATEID=450269:1;MATENM=3;NM=0;NUMPARTS=2;SCTG=c_8_40425001_40450001_119C;SPAN=6491;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:15:15:4.2:46.2,4.2,0:15:0:-46.21:46.21\n8\t40531710\t450329:2\tG\tG[8:40279424[\t36\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TG;MAPQ=60;MATEID=450329:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_40523001_40548001_104C;SPAN=252286;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:12:12:3.3:36.3,3.3,0:8:8:-36.31:36.31\n8\t42332967\t450872:1\tC\tC[8:42336835[\t66\tPASS\tDISC_MAPQ=54;EVDNC=ASDIS;HOMSEQ=CCTGTAATCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATCGCTTGAACCCGGGAGGCAGAGGTTGCAGTGAGCCGAGATCGTGCCATTGCACTCC;MAPQ=60;MATEID=450872:2;MATENM=3;NM=5;NUMPARTS=2;SCTG=c_8_42336001_42361001_31C;SPAN=3868;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:22:1:6:66,6,0:9:14:-66.02:66.02\n8\t42336835\t450872:2\tC\t]8:42332967]C\t66\tPASS\tDISC_MAPQ=59;EVDNC=ASDIS;HOMSEQ=CCTGTAATCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATCGCTTGAACCCGGGAGGCAGAGGTTGCAGTGAGCCGAGATCGTGCCATTGCACTCC;MAPQ=60;MATEID=450872:1;MATENM=5;NM=3;NUMPARTS=2;SCTG=c_8_42336001_42361001_31C;SPAN=3868;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:22:1:6:66,6,0:9:14:-66.02:66.02\n8\t43588080\t734367:1\tC\t[15:62731836[C\t49\tPASS\tDISC_MAPQ=53;EVDNC=ASDIS;HOMSEQ=CC;MAPQ=60;MATEID=734367:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_15_62720001_62745001_57C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:16:19:1.8:49.5,1.8,0:11:8:-50.34:50.34\n8\t43776203\t451387:1\tT\t]8:43780756]T\t44\tPASS\tEVDNC=ASSMB;HOMSEQ=TTCTTTGGATTCAGCAGATTGGAAACACTCTTT;MAPQ=60;MATEID=451387:2;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_8_43757001_43782001_13C;SPAN=4553;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:16:32:34.1:44,0,34.1:16:0:-43.85:43.85\n8\t43780756\t451387:2\tT\tT[8:43776203[\t44\tPASS\tEVDNC=ASSMB;HOMSEQ=TTCTTTGGATTCAGCAGATTGGAAACACTCTTT;MAPQ=60;MATEID=451387:1;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_8_43757001_43782001_13C;SPAN=4553;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:16:32:34.1:44,0,34.1:16:0:-43.85:43.85\n8\t46080001\t451746:1\tT\tT[8:46080812[\t36\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TTCTTTTGATTCAACAGGTTGGAAACACTTTTTTTGTAGAAT;MAPQ=60;MATEID=451746:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_46060001_46085001_11C;SPAN=811;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:12:14:0.6:36.3,0.6,0:8:6:-38:38\n8\t46080812\t451746:2\tT\t]8:46080001]T\t36\tPASS\tDISC_MAPQ=53;EVDNC=ASDIS;HOMSEQ=TTCTTTTGATTCAACAGGTTGGAAACACTTTTTTTGTAGAAT;MAPQ=60;MATEID=451746:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_46060001_46085001_11C;SPAN=811;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:12:14:0.6:36.3,0.6,0:8:6:-38:38\n8\t46469698\t451798:1\tT\tT[8:46470019[\t55\tPASS\tEVDNC=ASSMB;HOMSEQ=CTTTCTAGCTTTT;MAPQ=60;MATEID=451798:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_46452001_46477001_68C;SPAN=321;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:19:25:6.2:55.7,0,6.2:19:0:-57.84:57.84\n8\t46470019\t451798:2\tC\t]8:46469698]C\t55\tPASS\tEVDNC=ASSMB;HOMSEQ=CTTTCTAGCTTTT;MAPQ=60;MATEID=451798:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_46452001_46477001_68C;SPAN=321;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:19:25:6.2:55.7,0,6.2:19:0:-57.84:57.84\n8\t46494290\t451803:1\tA\tA[8:46496276[\t29\tPASS\tDISC_MAPQ=55;EVDNC=DSCRD;IMPRECISE;MAPQ=55;MATEID=451803:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=8:46494290(+)-8:46496276(-)__8_46476501_46501501D;SPAN=1986;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:10:9:2.7:29.7,2.7,0:0:10:-29.71:29.71\n8\t46496276\t451803:2\tA\t]8:46494290]A\t29\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=451803:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=8:46494290(+)-8:46496276(-)__8_46476501_46501501D;SPAN=1986;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:10:9:2.7:29.7,2.7,0:0:10:-29.71:29.71\n8\t48174013\t999226:1\tT\tT[Un_JTFH01000836v1_decoy:1[\t49\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=999226:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1679_1_1109_1C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:17:5:4.5:49.5,4.5,0:17:0:-49.51:49.51\n8\t48174013\t452062:1\tT\tT[Un_JTFH01000836v1_decoy:1[\t55\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=452062:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_48167001_48192001_57C;SPAN=-1;SUBN=1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:19:27:12.2:55.1,0,12.2:19:0:-56.6:56.6\n8\t48180826\t452065:1\tG\tG[8:48181419[\t28\tPASS\tEVDNC=ASSMB;HOMSEQ=G;MAPQ=60;MATEID=452065:2;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_8_48167001_48192001_123C;SPAN=593;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:16:8.9:28.7,0,8.9:10:0:-28.89:28.89\n8\t48181419\t452065:2\tG\t]8:48180826]G\t28\tPASS\tEVDNC=ASSMB;HOMSEQ=G;MAPQ=60;MATEID=452065:1;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_8_48167001_48192001_123C;SPAN=593;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:16:8.9:28.7,0,8.9:10:0:-28.89:28.89\n8\t49713404\t987218:1\tT\tT[Un_KN707628v1_decoy:1[\t46\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=987218:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_479_1_2960_3C;SPAN=-1;SUBN=1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:15:4:4.2:46.2,4.2,0:15:0:-46.21:46.21\n8\t50118594\t452481:1\tC\tC[8:50125769[\t46\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=452481:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=8:50118594(+)-8:50125769(-)__8_50102501_50127501D;SPAN=7175;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:16:2:4.2:46.2,4.2,0:0:16:-46.21:46.21\n8\t50125769\t452481:2\tT\t]8:50118594]T\t46\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=452481:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=8:50118594(+)-8:50125769(-)__8_50102501_50127501D;SPAN=7175;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:16:2:4.2:46.2,4.2,0:0:16:-46.21:46.21\n8\t50839986\t452617:1\tA\tA[8:50840180[\t19\tPASS\tEVDNC=ASSMB;HOMSEQ=A;MAPQ=60;MATEID=452617:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_50837501_50862501_21C;SPAN=194;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:7:14:15.8:19.1,0,15.8:7:0:-19.19:19.19\n8\t50840180\t452617:2\tA\t]8:50839986]A\t19\tPASS\tEVDNC=ASSMB;HOMSEQ=A;MAPQ=60;MATEID=452617:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_50837501_50862501_21C;SPAN=194;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:7:14:15.8:19.1,0,15.8:7:0:-19.19:19.19\n8\t51817582\t452806:1\tC\t]11:38791187]C\t49\tPASS\tDISC_MAPQ=59;EVDNC=DSCRD;IMPRECISE;MAPQ=59;MATEID=452806:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=8:51817582(-)-11:38791187(+)__8_51817501_51842501D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:17:13:4.5:49.5,4.5,0:0:17:-49.51:49.51\n8\t51819021\t452809:1\tA\tA[11:38791106[\t82\tPASS\tDISC_MAPQ=49;EVDNC=DSCRD;IMPRECISE;MAPQ=49;MATEID=452809:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=8:51819021(+)-11:38791106(-)__8_51817501_51842501D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:27:10:7.5:82.5,7.5,0:0:27:-82.52:82.52\n8\t59222847\t454429:1\tT\t]8:59224226]T\t49\tPASS\tDISC_MAPQ=56;EVDNC=DSCRD;IMPRECISE;MAPQ=56;MATEID=454429:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=8:59222847(-)-8:59224226(+)__8_59216501_59241501D;SPAN=1379;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:17:17:4.5:49.5,4.5,0:0:17:-49.51:49.51\n8\t59224226\t454429:2\tA\tA[8:59222847[\t49\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=454429:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=8:59222847(-)-8:59224226(+)__8_59216501_59241501D;SPAN=1379;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:17:17:4.5:49.5,4.5,0:0:17:-49.51:49.51\n8\t62017592\t454978:1\tT\tT[8:62017897[\t36\tPASS\tEVDNC=ASSMB;HOMSEQ=ATATTCTT;MAPQ=60;MATEID=454978:2;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_8_62009501_62034501_28C;SPAN=305;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:12:11:3.3:36.3,3.3,0:12:0:-36.31:36.31\n8\t62017897\t454978:2\tA\t]8:62017592]A\t36\tPASS\tEVDNC=ASSMB;HOMSEQ=ATATTCTT;MAPQ=60;MATEID=454978:1;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_8_62009501_62034501_28C;SPAN=305;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:12:11:3.3:36.3,3.3,0:12:0:-36.31:36.31\n8\t62346646\t455114:1\tG\tG[8:62350676[\t42\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TGAG;MAPQ=60;MATEID=455114:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_8_62328001_62353001_14C;SPAN=4030;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:14:13:3.9:42.9,3.9,0:9:9:-42.91:42.91\n8\t62350676\t455114:2\tT\t]8:62346646]T\t42\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TGAG;MAPQ=60;MATEID=455114:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_8_62328001_62353001_14C;SPAN=4030;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:14:13:3.9:42.9,3.9,0:9:9:-42.91:42.91\n8\t63059041\t504759:1\tT\t]9:90432262]T\t25\tPASS\tDISC_MAPQ=255;EVDNC=TSI_G;HOMSEQ=TTTTTTTTTGAGACGG;INSERTION=TTTTTTGTTGTTGTTG;MAPQ=60;MATEID=504759:2;MATENM=2;NM=0;NUMPARTS=3;SCTG=c_9_90429501_90454501_9C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:28:25.1:25.1,0,44.9:10:0:-25.14:25.46\n8\t67227171\t456003:1\tC\t]8:67247201]C\t47\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=456003:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_67228001_67253001_3C;SPAN=20030;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:16:20:1.1:47.3,0,1.1:16:0:-49.48:49.48\n8\t67247201\t456003:2\tT\tT[8:67227171[\t47\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=456003:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_67228001_67253001_3C;SPAN=20030;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:16:20:1.1:47.3,0,1.1:16:0:-49.48:49.48\n8\t70380126\t456829:1\tA\t]8:70404842]A\t39\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AA;MAPQ=60;MATEID=456829:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_70388501_70413501_9C;SPAN=24716;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:12:13:3.6:39.6,3.6,0:10:7:-39.28:39.28\n8\t70404842\t456829:2\tA\tA[8:70380126[\t39\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AA;MAPQ=60;MATEID=456829:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_70388501_70413501_9C;SPAN=24716;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:12:13:3.6:39.6,3.6,0:10:7:-39.28:39.28\n8\t70671447\t456910:1\tA\tA[8:70672408[\t92\tPASS\tDISC_MAPQ=59;EVDNC=DSCRD;IMPRECISE;MAPQ=59;MATEID=456910:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=8:70671447(+)-8:70672408(-)__8_70658001_70683001D;SPAN=961;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:31:16:8.4:92.4,8.4,0:0:31:-92.42:92.42\n8\t70672408\t456910:2\tT\t]8:70671447]T\t92\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=456910:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=8:70671447(+)-8:70672408(-)__8_70658001_70683001D;SPAN=961;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:31:16:8.4:92.4,8.4,0:0:31:-92.42:92.42\n8\t71639183\t457174:1\tC\tC[8:71639505[\t26\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=GTTTCACTATATC;MAPQ=60;MATEID=457174:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_71638001_71663001_110C;SPAN=322;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:22:26.9:26.9,0,26.9:5:5:-26.83:26.83\n8\t71639505\t457174:2\tG\t]8:71639183]G\t26\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=GTTTCACTATATC;MAPQ=60;MATEID=457174:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_71638001_71663001_110C;SPAN=322;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:22:26.9:26.9,0,26.9:5:5:-26.83:26.83\n8\t72488218\t457496:1\tA\t]8:72492038]A\t31\tPASS\tEVDNC=ASSMB;INSERTION=AGG;MAPQ=60;MATEID=457496:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_72471001_72496001_0C;SPAN=3820;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:31:31.1:31.1,0,44.3:12:0:-30.9:31.08\n8\t72492038\t457496:2\tT\tT[8:72488218[\t31\tPASS\tEVDNC=ASSMB;INSERTION=AGG;MAPQ=60;MATEID=457496:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_72471001_72496001_0C;SPAN=3820;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:31:31.1:31.1,0,44.3:12:0:-30.9:31.08\n8\t72874467\t164465:2\tA\tA]3:62586884]\t0\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TA;MAPQ=60;MATEID=164465:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_62573001_62598001_0C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/0:6:89:5.1:0,5.1,234.3:4:3:5.211:10.46\n8\t72875540\t457568:1\tT\tT[8:72881589[\t15\tPASS\tEVDNC=ASSMB;HOMSEQ=TGCAAATCTT;MAPQ=60;MATEID=457568:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_72863001_72888001_19C;SPAN=6049;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:7:26:15.8:15.8,0,48.8:7:0:-15.8:16.78\n8\t72881589\t457568:2\tT\t]8:72875540]T\t15\tPASS\tEVDNC=ASSMB;HOMSEQ=TGCAAATCTT;MAPQ=60;MATEID=457568:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_72863001_72888001_19C;SPAN=6049;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:7:26:15.8:15.8,0,48.8:7:0:-15.8:16.78\n8\t74964713\t458158:1\tT\tT[8:74965030[\t40\tPASS\tEVDNC=ASSMB;HOMSEQ=TCTGTTTCTT;MAPQ=60;MATEID=458158:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_74945501_74970501_88C;SPAN=317;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:21:10.7:40.4,0,10.7:14:0:-41.11:41.11\n8\t74965030\t458158:2\tT\t]8:74964713]T\t40\tPASS\tEVDNC=ASSMB;HOMSEQ=TCTGTTTCTT;MAPQ=60;MATEID=458158:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_74945501_74970501_88C;SPAN=317;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:21:10.7:40.4,0,10.7:14:0:-41.11:41.11\n8\t78551616\t469227:1\tA\t[8:109495685[A\t58\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AT;MAPQ=60;MATEID=469227:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_109490501_109515501_42C;SPAN=30944069;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:21:38:35.6:58.7,0,35.6:14:12:-58.9:58.9\n8\t78595007\t459008:2\tT\tT[4:124019638[\t49\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AT;MAPQ=60;MATEID=459008:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_78571501_78596501_14C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:15:17:4.5:49.5,4.5,0:12:8:-48.04:48.04\n8\t84953160\t460774:1\tT\tT]8:84961920]\t24\tPASS\tDISC_MAPQ=36;EVDNC=DSCRD;IMPRECISE;MAPQ=36;MATEID=460774:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=8:84953160(+)-8:84961920(+)__8_84941501_84966501D;SPAN=8760;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:32:24.2:24.2,0,53.9:0:10:-24.02:24.74\n8\t84961920\t460774:2\tG\tG]8:84953160]\t24\tPASS\tDISC_MAPQ=51;EVDNC=DSCRD;IMPRECISE;MAPQ=51;MATEID=460774:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=8:84953160(+)-8:84961920(+)__8_84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Q=59;MATEID=463125:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=8:93654319(+)-19:9167128(-)__8_93639001_93664001D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:21:10:5.7:62.7,5.7,0:0:21:-62.72:62.72\n8\t95863000\t463991:1\tT\tT[8:95867363[\t47\tPASS\tEVDNC=ASSMB;HOMSEQ=CAT;MAPQ=60;MATEID=463991:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_95844001_95869001_11C;SPAN=4363;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:17:29:24.8:47.9,0,24.8:17:0:-48.35:48.35\n8\t95867363\t463991:2\tC\t]8:95863000]C\t47\tPASS\tEVDNC=ASSMB;HOMSEQ=CAT;MAPQ=60;MATEID=463991:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_95844001_95869001_11C;SPAN=4363;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:17:29:24.8:47.9,0,24.8:17:0:-48.35:48.35\n8\t96085860\t464075:1\tA\tA[8:96086198[\t55\tPASS\tEVDNC=ASSMB;HOMSEQ=GAAAGAGAGGTATTA;MAPQ=60;MATEID=464075:2;MATENM=5;NM=0;NUMPARTS=2;SCTG=c_8_96064501_96089501_8C;SPAN=338;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:31:168:55.3:55.3,0,365.6:31:0:-55.11:68.49\n8\t96086198\t464075:2\tG\t]8:96085860]G\t55\tPASS\tEVDNC=ASSMB;HOMSEQ=GAAAGAGAGGTATTA;MAPQ=60;MATEID=464075:1;MATENM=0;NM=5;NUMPARTS=2;SCTG=c_8_96064501_96089501_8C;SPAN=338;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:31:168:55.3:55.3,0,365.6:31:0:-55.11:68.49\n8\t96173027\t464091:2\tC\t]4:139694008]C\t31\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=464091:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_96162501_96187501_54C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:17:8.6:31.7,0,8.6:11:0:-32.06:32.06\n8\t96174456\t464088:2\tA\tA[4:116722508[\t44\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;MAPQ=60;MATEID=464088:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_96162501_96187501_12C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:16:28:25.1:44.9,0,25.1:10:11:-45.23:45.23\n8\t97583181\t464420:1\tT\tT[8:97583504[\t99\tPASS\tEVDNC=ASSMB;HOMSEQ=AAAAATAATAAATTTTT;MAPQ=60;MATEID=464420:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_97583501_97608501_87C;SPAN=323;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:38:12:10.5:115.5,10.5,0:38:0:-115.5:115.5\n8\t97583504\t464420:2\tA\t]8:97583181]A\t99\tPASS\tEVDNC=ASSMB;HOMSEQ=AAAAATAATAAATTTTT;MAPQ=60;MATEID=464420:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_97583501_97608501_87C;SPAN=323;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:38:12:10.5:115.5,10.5,0:38:0:-115.5:115.5\n8\t98214711\t464688:2\tG\tG]4:141260902]\t27\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;INSERTION=AA;MAPQ=60;MATEID=464688:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_98196001_98221001_19C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:21:23.9:27.2,0,23.9:9:2:-27.11:27.11\n8\t98919076\t464913:1\tC\t]8:99035533]C\t22\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=464913:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=8:98919076(-)-8:99035533(+)__8_99029001_99054001D;SPAN=116457;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:26:22.4:22.4,0,42.2:0:9:-22.4:22.76\n8\t99035533\t464913:2\tA\tA[8:98919076[\t22\tPASS\tDISC_MAPQ=56;EVDNC=DSCRD;IMPRECISE;MAPQ=56;MATEID=464913:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=8:98919076(-)-8:99035533(+)__8_99029001_99054001D;SPAN=116457;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:26:22.4:22.4,0,42.2:0:9:-22.4:22.76\n8\t100064021\t882837:1\tT\t]20:47782526]T\t63\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;MAPQ=60;MATEID=882837:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_47775001_47800001_26C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:29:116:63.2:63.2,0,228.2:20:27:-63.12:68.41\n8\t101325742\t465752:1\tT\t]8:101488146]T\t18\tPASS\tEVDNC=ASSMB;HOMSEQ=TTT;MAPQ=60;MATEID=465752:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_101307501_101332501_6C;SPAN=162404;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:39:18.8:18.8,0,78.2:9:0:-18.75:20.87\n8\t101448776\t465866:1\tT\t]8:101540338]T\t52\tPASS\tEVDNC=ASSMB;HOMSEQ=TTA;MAPQ=60;MATEID=465866:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_101528001_101553001_15C;SPAN=91562;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:21:60:52.4:52.4,0,98.6:21:0:-52.46:53.23\n8\t101488146\t465752:2\tT\tT[8:101325742[\t18\tPASS\tEVDNC=ASSMB;HOMSEQ=TTT;MAPQ=60;MATEID=465752:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_101307501_101332501_6C;SPAN=162404;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:39:18.8:18.8,0,78.2:9:0:-18.75:20.87\n8\t101540338\t465866:2\tA\tA[8:101448776[\t52\tPASS\tEVDNC=ASSMB;HOMSEQ=TTA;MAPQ=60;MATEID=465866:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_101528001_101553001_15C;SPAN=91562;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:21:60:52.4:52.4,0,98.6:21:0:-52.46:53.23\n8\t102423273\t466221:1\tA\tA]8:102423778]\t82\tPASS\tDISC_MAPQ=57;EVDNC=ASDIS;HOMSEQ=TAGCTGGGATTAC;MAPQ=60;MATEID=466221:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_102410001_102435001_106C;SPAN=505;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:29:47:33.2:82.7,0,33.2:17:21:-83.52:83.52\n8\t102423778\t466221:2\tC\tC]8:102423273]\t82\tPASS\tDISC_MAPQ=52;EVDNC=ASDIS;HOMSEQ=TAGCTGGGATTAC;MAPQ=60;MATEID=466221:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_102410001_102435001_106C;SPAN=505;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:29:47:33.2:82.7,0,33.2:17:21:-83.52:83.52\n8\t103749080\t466883:1\tT\tT[8:103749364[\t1\tPASS\tEVDNC=ASSMB;HOMSEQ=GGCCTCCCAAAGTGCTGGGATTACAGGCAT;MAPQ=36;MATEID=466883:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_103733001_103758001_111C;SPAN=284;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:5:53:1.7:1.7,0,130.4:5:0:-1.607:9.478\n8\t103749364\t466883:2\tG\t]8:103749080]G\t1\tPASS\tEVDNC=ASSMB;HOMSEQ=GGCCTCCCAAAGTGCTGGGATTACAGGCAT;MAPQ=60;MATEID=466883:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_103733001_103758001_111C;SPAN=284;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:5:53:1.7:1.7,0,130.4:5:0:-1.607:9.478\n8\t103833107\t510495:1\tT\tT[9:109410883[\t32\tPASS\tEVDNC=ASSMB;INSERTION=GCATTTTTT;MAPQ=60;MATEID=510495:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_109392501_109417501_62C;SPAN=-1;SUBN=4;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:25:29.3:32.6,0,29.3:12:0:-32.59:32.59\n8\t103863624\t427546:2\tT\t]7:133435161]T\t42\tPASS\tEVDNC=ASSMB;HOMSEQ=TTA;MAPQ=60;MATEID=427546:1;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_7_133427001_133452001_4C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:14:13:3.9:42.9,3.9,0:14:0:-42.91:42.91\n8\t104467414\t467167:1\tC\t]8:104538330]C\t12\tPASS\tEVDNC=ASSMB;HOMSEQ=CCCA;MAPQ=60;MATEID=467167:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_104517001_104542001_2C;SPAN=70916;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:7:39:12.2:12.2,0,84.8:7:0:-12.14:15.37\n8\t104538330\t467167:2\tA\tA[8:104467414[\t12\tPASS\tEVDNC=ASSMB;HOMSEQ=CCCA;MAPQ=60;MATEID=467167:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_104517001_104542001_2C;SPAN=70916;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:7:39:12.2:12.2,0,84.8:7:0:-12.14:15.37\n8\t105955934\t467732:1\tA\tA[8:105956892[\t24\tPASS\tDISC_MAPQ=34;EVDNC=ASDIS;HOMSEQ=AAA;MAPQ=47;MATEID=467732:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_105938001_105963001_27C;SPAN=958;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:66:24.5:24.5,0,140:9:8:-24.36:29.13\n8\t105956892\t467732:2\tA\t]8:105955934]A\t24\tPASS\tDISC_MAPQ=50;EVDNC=ASDIS;HOMSEQ=AAA;MAPQ=60;MATEID=467732:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_105938001_105963001_27C;SPAN=958;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:66:24.5:24.5,0,140:9:8:-24.36:29.13\n8\t106040326\t467745:1\tA\tA[8:106040600[\t99\tPASS\tEVDNC=ASSMB;INSERTION=A;MAPQ=60;MATEID=467745:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_106036001_106061001_27C;SPAN=274;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:41:51:5.6:121.1,0,5.6:41:0:-127:127\n8\t106040600\t467745:2\tC\t]8:106040326]C\t99\tPASS\tEVDNC=ASSMB;INSERTION=A;MAPQ=60;MATEID=467745:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_106036001_106061001_27C;SPAN=274;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:41:51:5.6:121.1,0,5.6:41:0:-127:127\n8\t106498881\t467953:1\tG\tG[8:106499191[\t99\tPASS\tEVDNC=ASSMB;HOMSEQ=AAAGAATTAGGAGATG;MAPQ=60;MATEID=467953:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_106477001_106502001_118C;SPAN=310;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:49:34:13.5:148.5,13.5,0:49:0:-148.5:148.5\n8\t106499191\t467953:2\tA\t]8:106498881]A\t99\tPASS\tEVDNC=ASSMB;HOMSEQ=AAAGAATTAGGAGATG;MAPQ=60;MATEID=467953:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_106477001_106502001_118C;SPAN=310;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:49:34:13.5:148.5,13.5,0:49:0:-148.5:148.5\n8\t107108006\t468214:1\tG\tG[8:107108310[\t65\tPASS\tEVDNC=ASSMB;HOMSEQ=AAGAATGCATGAACATTGG;MAPQ=60;MATEID=468214:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_107089501_107114501_16C;SPAN=304;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:23:37:26:65.6,0,26:23:0:-66.36:66.36\n8\t107108310\t468214:2\tA\t]8:107108006]A\t65\tPASS\tEVDNC=ASSMB;HOMSEQ=AAGAATGCATGAACATTGG;MAPQ=60;MATEID=468214:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_107089501_107114501_16C;SPAN=304;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:23:37:26:65.6,0,26:23:0:-66.36:66.36\n8\t107368493\t468346:1\tT\tT[8:107368851[\t71\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TATTCCTTATACTTATTTATAAGTATATTCCTTATACTTATTT;MAPQ=60;MATEID=468346:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_8_107359001_107384001_126C;SPAN=358;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:25:41:31.4:71,0,31.4:15:15:-71.79:71.79\n8\t107368851\t468346:2\tT\t]8:107368493]T\t71\tPASS\tDISC_MAPQ=58;EVDNC=ASDIS;HOMSEQ=TATTCCTTATACTTATTTATAAGTATATTCCTTATACTTATTT;MAPQ=60;MATEID=468346:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_8_107359001_107384001_126C;SPAN=358;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:25:41:31.4:71,0,31.4:15:15:-71.79:71.79\n8\t107612139\t468511:1\tA\t]8:107622099]A\t2\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=ACA;MAPQ=60;MATEID=468511:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_107604001_107629001_103C;SPAN=9960;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:96:2.9:2.9,0,237.2:2:9:-2.724:17.03\n8\t107622099\t468511:2\tA\tA[8:107612139[\t2\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=ACA;MAPQ=60;MATEID=468511:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_107604001_107629001_103C;SPAN=9960;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:96:2.9:2.9,0,237.2:2:9:-2.724:17.03\n8\t107769184\t468586:1\tG\tG[8:107770194[\t86\tPASS\tEVDNC=ASSMB;INSERTION=GAGCATTCAT;MAPQ=60;MATEID=468586:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_8_107751001_107776001_95C;SPAN=1010;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:30:47:29.9:86,0,29.9:30:0:-87.13:87.13\n8\t107770194\t468586:2\tG\t]8:107769184]G\t86\tPASS\tEVDNC=ASSMB;INSERTION=GAGCATTCAT;MAPQ=60;MATEID=468586:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_8_107751001_107776001_95C;SPAN=1010;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:30:47:29.9:86,0,29.9:30:0:-87.13:87.13\n8\t108717946\t468836:1\tT\tT[8:108718258[\t99\tPASS\tEVDNC=ASSMB;HOMSEQ=CTGACTTAGGTTTT;MAPQ=60;MATEID=468836:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_108706501_108731501_74C;SPAN=312;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:33:36:9.9:108.9,9.9,0:33:0:-107.6:107.6\n8\t108718258\t468836:2\tC\t]8:108717946]C\t99\tPASS\tEVDNC=ASSMB;HOMSEQ=CTGACTTAGGTTTT;MAPQ=60;MATEID=468836:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_108706501_108731501_74C;SPAN=312;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:33:36:9.9:108.9,9.9,0:33:0:-107.6:107.6\n8\t108770582\t468851:2\tA\tA[4:111438522[\t15\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=468851:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=4:111438522(-)-8:108770582(+)__8_108755501_108780501D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:50:15.8:15.8,0,108.2:0:9:-15.65:19.78\n8\t109065134\t469005:1\tA\t]8:109065246]A\t99\tPASS\tEVDNC=ASSMB;HOMSEQ=ATA;MAPQ=60;MATEID=469005:2;MATENM=4;NM=1;NUMPARTS=2;SCTG=c_8_109049501_109074501_87C;SPAN=112;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:44:100:99:117.2,0,133.7:44:0:-117.1:117.2\n8\t109065246\t469005:2\tA\tA[8:109065134[\t99\tPASS\tEVDNC=ASSMB;HOMSEQ=ATA;MAPQ=60;MATEID=469005:1;MATENM=1;NM=4;NUMPARTS=2;SCTG=c_8_109049501_109074501_87C;SPAN=112;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:44:100:99:117.2,0,133.7:44:0:-117.1:117.2\n8\t109222490\t469108:1\tC\tC[8:109222824[\t99\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=469108:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_8_109221001_109246001_68C;SPAN=334;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:35:54:34.4:100.4,0,34.4:35:0:-102:102\n8\t109222824\t469108:2\tA\t]8:109222490]A\t99\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=469108:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_8_109221001_109246001_68C;SPAN=334;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:35:54:34.4:100.4,0,34.4:35:0:-102:102\n8\t109495685\t469227:2\tA\t[8:78551616[A\t58\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AT;MAPQ=60;MATEID=469227:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_109490501_109515501_42C;SPAN=30944069;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:21:38:35.6:58.7,0,35.6:14:12:-58.9:58.9\n8\t109498091\t469232:1\tT\tT[8:109498401[\t80\tPASS\tEVDNC=ASSMB;HOMSEQ=CATGTTTTCTTTT;MAPQ=60;MATEID=469232:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_109490501_109515501_26C;SPAN=310;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:28:43:27.5:80.3,0,27.5:28:0:-81.73:81.73\n8\t109498401\t469232:2\tC\t]8:109498091]C\t80\tPASS\tEVDNC=ASSMB;HOMSEQ=CATGTTTTCTTTT;MAPQ=60;MATEID=469232:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_109490501_109515501_26C;SPAN=310;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:28:43:27.5:80.3,0,27.5:28:0:-81.73:81.73\n8\t109517001\t469240:2\tA\tA[4:122720683[\t28\tPASS\tEVDNC=ASSMB;HOMSEQ=A;MAPQ=60;MATEID=469240:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_109515001_109540001_59C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:53:28.1:28.1,0,104:13:0:-28.02:30.54\n8\t111281823\t469836:1\tG\tG[8:111284911[\t86\tPASS\tEVDNC=ASSMB;HOMSEQ=G;MAPQ=60;MATEID=469836:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_111279001_111304001_53C;SPAN=3088;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:31:56:53.6:86.6,0,53.6:31:0:-86.98:86.98\n8\t111284911\t469836:2\tG\t]8:111281823]G\t86\tPASS\tEVDNC=ASSMB;HOMSEQ=G;MAPQ=60;MATEID=469836:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_111279001_111304001_53C;SPAN=3088;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:31:56:53.6:86.6,0,53.6:31:0:-86.98:86.98\n8\t111355427\t473012:1\tT\tT[8:120549876[\t44\tPASS\tEVDNC=ASSMB;HOMSEQ=TT;MAPQ=60;MATEID=473012:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_120540001_120565001_41C;SPAN=9194449;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:16:32:34.1:44,0,34.1:16:0:-43.85:43.85\n8\t113044266\t470428:1\tG\tG[8:113046544[\t99\tPASS\tEVDNC=ASSMB;HOMSEQ=ATG;MAPQ=60;MATEID=470428:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_113043001_113068001_9C;SPAN=2278;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:42:35:11.7:128.7,11.7,0:42:0:-128.7:128.7\n8\t113046544\t470428:2\tA\t]8:113044266]A\t99\tPASS\tEVDNC=ASSMB;HOMSEQ=ATG;MAPQ=60;MATEID=470428:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_113043001_113068001_9C;SPAN=2278;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:42:35:11.7:128.7,11.7,0:42:0:-128.7:128.7\n8\t114067086\t470703:1\tC\tC[8:114068448[\t99\tPASS\tEVDNC=ASSMB;INSERTION=CAG;MAPQ=60;MATEID=470703:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_114047501_114072501_183C;SPAN=1362;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:43:32:12:132,12,0:43:0:-132:132\n8\t114068448\t470703:2\tA\t]8:114067086]A\t99\tPASS\tEVDNC=ASSMB;INSERTION=CAG;MAPQ=60;MATEID=470703:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_114047501_114072501_183C;SPAN=1362;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:43:32:12:132,12,0:43:0:-132:132\n8\t114245422\t470781:1\tC\tC[8:114246294[\t22\tPASS\tDISC_MAPQ=32;EVDNC=ASDIS;HOMSEQ=TCC;MAPQ=60;MATEID=470781:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_114243501_114268501_42C;SPAN=872;SUBN=1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:49:22.7:22.7,0,98.6:10:2:-22.54:25.36\n8\t114246294\t470781:2\tT\t]8:114245422]T\t22\tPASS\tDISC_MAPQ=20;EVDNC=ASDIS;HOMSEQ=TCC;MAPQ=60;MATEID=470781:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_114243501_114268501_42C;SPAN=872;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:49:22.7:22.7,0,98.6:10:2:-22.54:25.36\n8\t115476006\t471204:1\tT\tT[8:115476319[\t32\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=CAGAAAATATACTTTCT;MAPQ=60;MATEID=471204:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_115468501_115493501_69C;SPAN=313;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:36:32.9:32.9,0,56:8:6:-32.79:33.17\n8\t115476319\t471204:2\tC\t]8:115476006]C\t32\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=CAGAAAATATACTTTCT;MAPQ=60;MATEID=471204:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_115468501_115493501_69C;SPAN=313;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:36:32.9:32.9,0,56:8:6:-32.79:33.17\n8\t117667362\t471947:2\tT\t[2:125013432[T\t92\tPASS\tDISC_MAPQ=27;EVDNC=ASDIS;INSERTION=AAATAAAAT;MAPQ=0;MATEID=471947:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_117649001_117674001_5C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:31:26:8.4:92.4,8.4,0:27:7:-92.42:92.42\n8\t117968533\t472068:1\tA\tA[8:117968870[\t91\tPASS\tEVDNC=ASSMB;HOMSEQ=ATTCTGCCTTATTTA;MAPQ=60;MATEID=472068:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_8_117967501_117992501_107C;SPAN=337;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:31:40:8.6:91.1,0,8.6:31:0:-94.93:94.93\n8\t117968870\t472068:2\tA\t]8:117968533]A\t91\tPASS\tEVDNC=ASSMB;HOMSEQ=ATTCTGCCTTATTTA;MAPQ=60;MATEID=472068:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_8_117967501_117992501_107C;SPAN=337;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:31:40:8.6:91.1,0,8.6:31:0:-94.93:94.93\n8\t120321170\t472949:1\tG\t]8:120378583]G\t15\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=472949:2;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_8_120368501_120393501_35C;SPAN=57413;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:7:26:15.8:15.8,0,48.8:7:0:-15.8:16.78\n8\t120378583\t472949:2\tC\tC[8:120321170[\t15\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=472949:1;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_8_120368501_120393501_35C;SPAN=57413;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:7:26:15.8:15.8,0,48.8:7:0:-15.8:16.78\n8\t120549876\t473012:2\tT\t]8:111355427]T\t44\tPASS\tEVDNC=ASSMB;HOMSEQ=TT;MAPQ=60;MATEID=473012:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_120540001_120565001_41C;SPAN=9194449;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:16:32:34.1:44,0,34.1:16:0:-43.85:43.85\n8\t120669445\t473069:1\tT\tT[8:120669752[\t99\tPASS\tEVDNC=ASSMB;HOMSEQ=GAAAATGCTTGTT;MAPQ=60;MATEID=473069:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_8_120662501_120687501_107C;SPAN=307;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:36:42:1.8:108.9,1.8,0:36:0:-114:114\n8\t120669752\t473069:2\tG\t]8:120669445]G\t99\tPASS\tEVDNC=ASSMB;HOMSEQ=GAAAATGCTTGTT;MAPQ=60;MATEID=473069:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_8_120662501_120687501_107C;SPAN=307;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:36:42:1.8:108.9,1.8,0:36:0:-114:114\n8\t122286805\t473790:1\tT\t]8:122286919]T\t5\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=473790:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_122279501_122304501_48C;SPAN=114;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:75:5.3:5.3,0,183.5:8:0:-5.326:15.61\n8\t122286919\t473790:2\tC\tC[8:122286805[\t5\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=473790:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_122279501_122304501_48C;SPAN=114;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:75:5.3:5.3,0,183.5:8:0:-5.326:15.61\n8\t122356933\t473874:1\tC\t]8:122460639]C\t30\tPASS\tEVDNC=ASSMB;HOMSEQ=C;MAPQ=60;MATEID=473874:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_122451001_122476001_45C;SPAN=103706;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:32:30.8:30.8,0,47.3:12:0:-30.62:30.87\n8\t122460639\t473874:2\tC\tC[8:122356933[\t30\tPASS\tEVDNC=ASSMB;HOMSEQ=C;MAPQ=60;MATEID=473874:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_122451001_122476001_45C;SPAN=103706;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:32:30.8:30.8,0,47.3:12:0:-30.62:30.87\n8\t124301274\t474613:1\tT\t]8:124311894]T\t9\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=474613:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_124288501_124313501_19C;SPAN=10620;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:61:9.5:9.5,0,141.5:8:0:-9.261:16.38\n8\t124311894\t474613:2\tG\tG[8:124301274[\t9\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=474613:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_124288501_124313501_19C;SPAN=10620;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:61:9.5:9.5,0,141.5:8:0:-9.261:16.38\n8\t124579365\t474755:2\tG\t]8:91552255]G\t18\tPASS\tDISC_MAPQ=60;EVDNC=TSI_L;HOMSEQ=GA;MAPQ=60;MATEID=474755:1;MATENM=0;NM=0;NUMPARTS=3;SCTG=c_8_124558001_124583001_91C;SPAN=33027110;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:39:18.8:18.8,0,78.2:7:5:-18.75:20.87\n8\t125582885\t475223:1\tA\tA[8:125588891[\t99\tPASS\tEVDNC=ASSMB;HOMSEQ=CACTCACA;MAPQ=60;MATEID=475223:2;MATENM=7;NM=0;NUMPARTS=2;SCTG=c_8_125587001_125612001_12C;SPAN=6006;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:47:31:12.9:141.9,12.9,0:47:0:-141.9:141.9\n8\t125588891\t475223:2\tC\t]8:125582885]C\t99\tPASS\tEVDNC=ASSMB;HOMSEQ=CACTCACA;MAPQ=60;MATEID=475223:1;MATENM=0;NM=7;NUMPARTS=2;SCTG=c_8_125587001_125612001_12C;SPAN=6006;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:47:31:12.9:141.9,12.9,0:47:0:-141.9:141.9\n8\t125669145\t475249:1\tT\tT[8:125669463[\t80\tPASS\tEVDNC=ASSMB;HOMSEQ=TCATGTTAATTTTT;MAPQ=60;MATEID=475249:2;MATENM=1;NM=2;NUMPARTS=2;SCTG=c_8_125660501_125685501_80C;SPAN=318;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:28:41:21.5:80.9,0,21.5:28:0:-82.75:82.75\n8\t125669463\t475249:2\tT\t]8:125669145]T\t80\tPASS\tEVDNC=ASSMB;HOMSEQ=TCATGTTAATTTTT;MAPQ=60;MATEID=475249:1;MATENM=2;NM=1;NUMPARTS=2;SCTG=c_8_125660501_125685501_80C;SPAN=318;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:28:41:21.5:80.9,0,21.5:28:0:-82.75:82.75\n8\t126114017\t475363:2\tC\t]4:127522207]C\t20\tPASS\tEVDNC=ASSMB;HOMSEQ=CAT;MAPQ=60;MATEID=475363:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_126101501_126126501_8C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:35:20:20,0,66.2:9:0:-19.87:21.36\n8\t126179961\t475380:1\tC\tC[8:126182328[\t70\tPASS\tEVDNC=ASSMB;INSERTION=T;MAPQ=60;MATEID=475380:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_126175001_126200001_66C;SPAN=2367;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:26:54:64.1:70.7,0,64.1:26:0:-70.66:70.66\n8\t126182328\t475380:2\tA\t]8:126179961]A\t70\tPASS\tEVDNC=ASSMB;INSERTION=T;MAPQ=60;MATEID=475380:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_126175001_126200001_66C;SPAN=2367;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:26:54:64.1:70.7,0,64.1:26:0:-70.66:70.66\n8\t126236711\t475428:1\tT\tT[8:126237039[\t67\tPASS\tEVDNC=ASSMB;INSERTION=AAAACATT;MAPQ=60;MATEID=475428:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_126224001_126249001_170C;SPAN=328;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:25:55:67.1:67.1,0,70.4:25:0:-67.07:67.07\n8\t126237039\t475428:2\tC\t]8:126236711]C\t67\tPASS\tEVDNC=ASSMB;INSERTION=AAAACATT;MAPQ=60;MATEID=475428:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_126224001_126249001_170C;SPAN=328;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:25:55:67.1:67.1,0,70.4:25:0:-67.07:67.07\n8\t126797640\t477799:1\tT\tT]8:131831800]\t79\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TTTCT;MAPQ=60;MATEID=477799:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_131810001_131835001_1C;SPAN=5034160;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:26:31:1.8:79.2,1.8,0:20:8:-81.69:81.69\n8\t127117370\t475747:1\tT\t[8:127118469[T\t26\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=CA;MAPQ=60;MATEID=475747:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_127106001_127131001_15C;SPAN=1099;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:72:26:26,0,154.7:10:6:-25.98:31.28\n8\t127118469\t475747:2\tC\t[8:127117370[C\t26\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=CA;MAPQ=60;MATEID=475747:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_127106001_127131001_15C;SPAN=1099;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:72:26:26,0,154.7:10:6:-25.98:31.28\n8\t127521585\t475914:2\tA\t[3:111555239[A\t99\tPASS\tDISC_MAPQ=57;EVDNC=ASDIS;INSERTION=AAAAAAATAAAAAA;MAPQ=60;MATEID=475914:1;MATENM=0;NM=6;NUMPARTS=2;SCTG=c_8_127498001_127523001_18C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:87:45:24.3:267.3,24.3,0:46:56:-267.4:267.4\n8\t127521605\t475916:2\tA\tA[7:65340142[\t99\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=ATA;MAPQ=60;MATEID=475916:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_127498001_127523001_8C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:36:56:37.1:103.1,0,37.1:34:6:-104.7:104.7\n8\t128092140\t476301:1\tA\t]8:128260292]A\t65\tPASS\tEVDNC=ASSMB;HOMSEQ=A;MAPQ=60;MATEID=476301:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_128257501_128282501_49C;SPAN=168152;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:24:50:58.7:65.3,0,58.7:24:0:-65.18:65.18\n8\t128260292\t476301:2\tA\tA[8:128092140[\t65\tPASS\tEVDNC=ASSMB;HOMSEQ=A;MAPQ=60;MATEID=476301:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_128257501_128282501_49C;SPAN=168152;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:24:50:58.7:65.3,0,58.7:24:0:-65.18:65.18\n8\t128452922\t476384:1\tT\tT[8:128459021[\t99\tPASS\tEVDNC=ASSMB;HOMSEQ=CCAGCTTGTGTTTTT;MAPQ=60;MATEID=476384:2;MATENM=8;NM=1;NUMPARTS=2;SCTG=c_8_128453501_128478501_6C;SPAN=6099;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:66:23:18.3:201.3,18.3,0:66:0:-201.3:201.3\n8\t128459021\t476384:2\tC\t]8:128452922]C\t99\tPASS\tEVDNC=ASSMB;HOMSEQ=CCAGCTTGTGTTTTT;MAPQ=60;MATEID=476384:1;MATENM=1;NM=8;NUMPARTS=2;SCTG=c_8_128453501_128478501_6C;SPAN=6099;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:66:23:18.3:201.3,18.3,0:66:0:-201.3:201.3\n8\t128891244\t476530:1\tA\tA[8:131821933[\t54\tPASS\tEVDNC=ASSMB;INSERTION=TT;MAPQ=60;MATEID=476530:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_128870001_128895001_45C;SPAN=2930689;SUBN=1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:19:29:18.2:54.5,0,18.2:19:0:-55.55:55.55\n8\t129429457\t480935:1\tT\tT[8:140088893[\t20\tPASS\tEVDNC=ASSMB;HOMSEQ=T;MAPQ=60;MATEID=480935:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_140066501_140091501_37C;SPAN=10659436;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:35:20:20,0,66.2:9:0:-19.87:21.36\n8\t129429474\t476707:2\tA\t[4:126064282[A\t40\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=T;MAPQ=60;MATEID=476707:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_129409001_129434001_74C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:15:34:40.1:40.1,0,43.4:13:3:-39.96:39.98\n8\t129429764\t476702:2\tA\tA[4:105671656[\t57\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=A;MAPQ=60;MATEID=476702:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_129409001_129434001_125C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:20:30:17.9:57.5,0,17.9:13:9:-58.74:58.74\n8\t129727754\t476951:1\tG\t]8:129865311]G\t14\tPASS\tEVDNC=ASSMB;HOMSEQ=G;MAPQ=60;MATEID=476951:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_129850001_129875001_17C;SPAN=137557;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:7:30:14.6:14.6,0,60.8:7:0:-14.67:16.27\n8\t129865311\t476951:2\tG\tG[8:129727754[\t14\tPASS\tEVDNC=ASSMB;HOMSEQ=G;MAPQ=60;MATEID=476951:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_129850001_129875001_17C;SPAN=137557;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:7:30:14.6:14.6,0,60.8:7:0:-14.67:16.27\n8\t130535526\t477262:2\tC\t[4:182335217[C\t99\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;MAPQ=60;MATEID=477262:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_130511501_130536501_1C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:38:25:10.5:115.5,10.5,0:27:19:-115.5:115.5\n8\t130722580\t477337:1\tT\tT[8:141644937[\t29\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTT;MAPQ=60;MATEID=477337:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_8_130707501_130732501_91C;SPAN=10922357;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:37:29.3:29.3,0,62.3:12:5:-29.21:29.92\n8\t130897690\t477423:1\tT\t[8:130898322[T\t34\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=477423:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=8:130897690(-)-8:130898322(-)__8_130879001_130904001D;SPAN=632;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:17:79:34.1:34.1,0,162.8:0:17:-33.91:38.83\n8\t130898322\t477423:2\tG\t[8:130897690[G\t34\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=477423:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=8:130897690(-)-8:130898322(-)__8_130879001_130904001D;SPAN=632;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:17:79:34.1:34.1,0,162.8:0:17:-33.91:38.83\n8\t131152906\t477489:2\tG\tG[4:139733131[\t31\tPASS\tEVDNC=ASSMB;INSERTION=ATCTGCATTTTT;MAPQ=60;MATEID=477489:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_131148501_131173501_29C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:31:31.1:31.1,0,44.3:12:0:-30.9:31.08\n8\t131821933\t476530:2\tG\t]8:128891244]G\t54\tPASS\tEVDNC=ASSMB;INSERTION=TT;MAPQ=60;MATEID=476530:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_128870001_128895001_45C;SPAN=2930689;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:19:29:18.2:54.5,0,18.2:19:0:-55.55:55.55\n8\t131831800\t477799:2\tA\tA]8:126797640]\t79\tPASS\tDISC_MAPQ=52;EVDNC=ASDIS;HOMSEQ=TTTCT;MAPQ=60;MATEID=477799:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_131810001_131835001_1C;SPAN=5034160;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:26:31:1.8:79.2,1.8,0:20:8:-81.69:81.69\n8\t133317217\t478309:1\tT\tT[8:133317524[\t99\tPASS\tEVDNC=ASSMB;HOMSEQ=CATAATAACTATTTTT;MAPQ=60;MATEID=478309:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_133304501_133329501_17C;SPAN=307;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:34:22:9.3:102.3,9.3,0:34:0:-102.3:102.3\n8\t133317524\t478309:2\tC\t]8:133317217]C\t99\tPASS\tEVDNC=ASSMB;HOMSEQ=CATAATAACTATTTTT;MAPQ=60;MATEID=478309:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_133304501_133329501_17C;SPAN=307;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:34:22:9.3:102.3,9.3,0:34:0:-102.3:102.3\n8\t134070686\t478579:1\tT\tT[8:134076773[\t10\tPASS\tEVDNC=ASSMB;HOMSEQ=CATTCTTCAACATTTT;MAPQ=60;MATEID=478579:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_134064001_134089001_56C;SPAN=6087;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:58:10.1:10.1,0,135.5:8:0:-10.1:16.57\n8\t134076773\t478579:2\tC\t]8:134070686]C\t10\tPASS\tEVDNC=ASSMB;HOMSEQ=CATTCTTCAACATTTT;MAPQ=60;MATEID=478579:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_134064001_134089001_56C;SPAN=6087;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:58:10.1:10.1,0,135.5:8:0:-10.1:16.57\n8\t135895484\t479171:1\tA\t]8:135918805]A\t39\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AG;MAPQ=60;MATEID=479171:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_135901501_135926501_131C;SPAN=23321;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:23:16.7:39.8,0,16.7:8:10:-40.18:40.18\n8\t135918805\t479171:2\tG\tG[8:135895484[\t39\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AG;MAPQ=60;MATEID=479171:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_135901501_135926501_131C;SPAN=23321;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:23:16.7:39.8,0,16.7:8:10:-40.18:40.18\n8\t136147954\t479271:1\tC\tC[8:136151656[\t99\tPASS\tEVDNC=ASSMB;HOMSEQ=GC;MAPQ=60;MATEID=479271:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_136146501_136171501_74C;SPAN=3702;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:35:25:9.6:105.6,9.6,0:35:0:-105.6:105.6\n8\t136151656\t479271:2\tG\t]8:136147954]G\t99\tPASS\tEVDNC=ASSMB;HOMSEQ=GC;MAPQ=60;MATEID=479271:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_136146501_136171501_74C;SPAN=3702;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:35:25:9.6:105.6,9.6,0:35:0:-105.6:105.6\n8\t136645913\t479453:2\tA\t[4:142696529[A\t26\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=CT;MAPQ=60;MATEID=479453:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_136636501_136661501_10C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:24:26.3:26.3,0,32.9:10:2:-26.26:26.32\n8\t136646252\t479457:2\tG\t]4:145607890]G\t16\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=479457:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=4:145607890(+)-8:136646252(-)__8_136636501_136661501D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:36:16.4:16.4,0,72.5:0:8:-16.29:18.4\n8\t136646564\t479452:2\tC\tC[4:141260745[\t24\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=GAC;MAPQ=60;MATEID=479452:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_136636501_136661501_40C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:29:24.8:24.8,0,47.9:8:5:-24.86:25.27\n8\t138020879\t886287:1\tG\t]20:55858690]G\t22\tPASS\tDISC_MAPQ=54;EVDNC=ASDIS;HOMSEQ=GC;MAPQ=60;MATEID=886287:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_55835501_55860501_0C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:39:22.1:22.1,0,74.9:6:8:-22.05:23.72\n8\t138632595\t480393:2\tG\t[4:133589596[G\t17\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=C;MAPQ=60;MATEID=480393:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_8_138621001_138646001_7C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:32:17.6:17.6,0,60.5:6:3:-17.41:18.87\n8\t139084311\t671986:1\tA\tA[13:61171765[\t29\tPASS\tEVDNC=ASSMB;INSERTION=G;MAPQ=60;MATEID=671986:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_13_61152001_61177001_19C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:14:5.9:29,0,5.9:10:0:-29.91:29.91\n8\t139960606\t480879:1\tC\tC[8:139962907[\t33\tPASS\tEVDNC=ASSMB;INSERTION=AGT;MAPQ=60;MATEID=480879:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_139944001_139969001_95C;SPAN=2301;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:33:33.8:33.8,0,47:13:0:-33.64:33.8\n8\t139962907\t480879:2\tA\t]8:139960606]A\t33\tPASS\tEVDNC=ASSMB;INSERTION=AGT;MAPQ=60;MATEID=480879:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_139944001_139969001_95C;SPAN=2301;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:33:33.8:33.8,0,47:13:0:-33.64:33.8\n8\t140088893\t480935:2\tT\t]8:129429457]T\t20\tPASS\tEVDNC=ASSMB;HOMSEQ=T;MAPQ=60;MATEID=480935:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_140066501_140091501_37C;SPAN=10659436;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:35:20:20,0,66.2:9:0:-19.87:21.36\n8\t140089087\t480933:2\tA\tA]8:90572079]\t42\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=A;MAPQ=60;MATEID=480933:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_8_140066501_140091501_99C;SPAN=49517008;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:15:24:16.4:42.8,0,16.4:10:5:-43.34:43.34\n8\t141227424\t481280:1\tT\tT[8:141229502[\t14\tPASS\tEVDNC=ASSMB;HOMSEQ=AGCT;MAPQ=60;MATEID=481280:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_141218001_141243001_16C;SPAN=2078;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:7:33:14:14,0,66.8:7:0:-13.83:15.94\n8\t141229502\t481280:2\tA\t]8:141227424]A\t14\tPASS\tEVDNC=ASSMB;HOMSEQ=AGCT;MAPQ=60;MATEID=481280:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_141218001_141243001_16C;SPAN=2078;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:7:33:14:14,0,66.8:7:0:-13.83:15.94\n8\t141347578\t481342:1\tT\t]8:141348077]T\t23\tPASS\tDISC_MAPQ=26;EVDNC=DSCRD;IMPRECISE;MAPQ=26;MATEID=481342:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=8:141347578(-)-8:141348077(+)__8_141340501_141365501D;SPAN=499;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:23:23.3:23.3,0,33.2:0:9:-23.24:23.37\n8\t141348077\t481342:2\tA\tA[8:141347578[\t23\tPASS\tDISC_MAPQ=48;EVDNC=DSCRD;IMPRECISE;MAPQ=48;MATEID=481342:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=8:141347578(-)-8:141348077(+)__8_141340501_141365501D;SPAN=499;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:23:23.3:23.3,0,33.2:0:9:-23.24:23.37\n8\t141644937\t477337:2\tT\t]8:130722580]T\t29\tPASS\tDISC_MAPQ=0;EVDNC=ASDIS;HOMSEQ=TCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTT;MAPQ=37;MATEID=477337:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_8_130707501_130732501_91C;SPAN=10922357;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:37:29.3:29.3,0,62.3:12:5:-29.21:29.92\n8\t142222638\t481809:1\tA\t]8:142223127]A\t13\tPASS\tDISC_MAPQ=39;EVDNC=DSCRD;IMPRECISE;MAPQ=39;MATEID=481809:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=8:142222638(-)-8:142223127(+)__8_142222501_142247501D;SPAN=489;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:48:13.1:13.1,0,105.5:0:8:-12.92:17.28\n8\t142223127\t481809:2\tC\tC[8:142222638[\t13\tPASS\tDISC_MAPQ=48;EVDNC=DSCRD;IMPRECISE;MAPQ=48;MATEID=481809:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=8:142222638(-)-8:142223127(+)__8_142222501_142247501D;SPAN=489;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:48:13.1:13.1,0,105.5:0:8:-12.92:17.28\n8\t142413422\t481912:1\tC\tC[8:142414319[\t99\tPASS\tEVDNC=ASSMB;HOMSEQ=CACAC;MAPQ=60;MATEID=481912:2;MATENM=6;NM=1;NUMPARTS=2;SCTG=c_8_142394001_142419001_27C;SPAN=897;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:35:18:9.6:105.6,9.6,0:35:0:-105.6:105.6\n8\t142414319\t481912:2\tC\t]8:142413422]C\t99\tPASS\tEVDNC=ASSMB;HOMSEQ=CACAC;MAPQ=60;MATEID=481912:1;MATENM=1;NM=6;NUMPARTS=2;SCTG=c_8_142394001_142419001_27C;SPAN=897;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:35:18:9.6:105.6,9.6,0:35:0:-105.6:105.6\n8\t142832825\t482096:1\tC\t[8:142838254[C\t20\tPASS\tDISC_MAPQ=45;EVDNC=DSCRD;IMPRECISE;MAPQ=45;MATEID=482096:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=8:142832825(-)-8:142838254(-)__8_142810501_142835501D;SPAN=5429;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:22:20.3:20.3,0,33.5:0:8:-20.22:20.45\n8\t142838254\t482096:2\tG\t[8:142832825[G\t20\tPASS\tDISC_MAPQ=57;EVDNC=DSCRD;IMPRECISE;MAPQ=57;MATEID=482096:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=8:142832825(-)-8:142838254(-)__8_142810501_142835501D;SPAN=5429;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:22:20.3:20.3,0,33.5:0:8:-20.22:20.45\n8\t142877785\t482139:1\tG\tG[8:142915758[\t42\tPASS\tDISC_MAPQ=56;EVDNC=DSCRD;IMPRECISE;MAPQ=56;MATEID=482139:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=8:142877785(+)-8:142915758(-)__8_142908501_142933501D;SPAN=37973;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:14:6:3.9:42.9,3.9,0:0:14:-42.91:42.91\n8\t142915758\t482139:2\tG\t]8:142877785]G\t42\tPASS\tDISC_MAPQ=59;EVDNC=DSCRD;IMPRECISE;MAPQ=59;MATEID=482139:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=8:142877785(+)-8:142915758(-)__8_142908501_142933501D;SPAN=37973;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:14:6:3.9:42.9,3.9,0:0:14:-42.91:42.91\n8\t143093112\t482353:1\tC\t]8:143204625]C\t60\tPASS\tEVDNC=ASSMB;INSERTION=AC;MAPQ=60;MATEID=482353:2;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_8_143202501_143227501_66C;SPAN=111513;SUBN=1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:21:30:14.6:60.8,0,14.6:21:0:-62.47:62.47\n8\t143204625\t482353:2\tT\tT[8:143093112[\t60\tPASS\tEVDNC=ASSMB;INSERTION=AC;MAPQ=60;MATEID=482353:1;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_8_143202501_143227501_66C;SPAN=111513;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:21:30:14.6:60.8,0,14.6:21:0:-62.47:62.47\n8\t143551897\t482512:1\tT\tT[8:143554070[\t82\tPASS\tEVDNC=ASSMB;HOMSEQ=TGT;MAPQ=60;MATEID=482512:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_8_143545501_143570501_56C;SPAN=2173;SUBN=2;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:27:19:7.5:82.5,7.5,0:27:0:-82.52:82.52\n8\t143554070\t482512:2\tT\t]8:143551897]T\t82\tPASS\tEVDNC=ASSMB;HOMSEQ=TGT;MAPQ=60;MATEID=482512:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_8_143545501_143570501_56C;SPAN=2173;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:27:19:7.5:82.5,7.5,0:27:0:-82.52:82.52\n8\t143618862\t482537:2\tT\t[3:186858374[T\t52\tPASS\tDISC_MAPQ=37;EVDNC=ASDIS;HOMSEQ=TA;MAPQ=6;MATEID=482537:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_143619001_143644001_92C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:18:1:4.8:52.8,4.8,0:13:9:-52.81:52.81\n8\t143746946\t482663:1\tC\t]8:143895039]C\t25\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=482663:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_143888501_143913501_10C;SPAN=148093;SUBN=2;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:15:12.2:25.4,0,12.2:9:0:-25.74:25.74\n8\t143895039\t482663:2\tC\tC[8:143746946[\t25\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=482663:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_143888501_143913501_10C;SPAN=148093;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:15:12.2:25.4,0,12.2:9:0:-25.74:25.74\n8\t144020506\t482722:1\tT\t]8:144021175]T\t32\tPASS\tDISC_MAPQ=45;EVDNC=DSCRD;IMPRECISE;MAPQ=45;MATEID=482722:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=8:144020506(-)-8:144021175(+)__8_144011001_144036001D;SPAN=669;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:36:32.9:32.9,0,56:0:13:-32.79:33.17\n8\t144021175\t482722:2\tT\tT[8:144020506[\t32\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=482722:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=8:144020506(-)-8:144021175(+)__8_144011001_144036001D;SPAN=669;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:36:32.9:32.9,0,56:0:13:-32.79:33.17\n8\t144619941\t482943:1\tT\t]8:144620589]T\t68\tPASS\tEVDNC=ASSMB;HOMSEQ=TGAGAGCATGTGTGCC;MAPQ=60;MATEID=482943:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_144599001_144624001_44C;SPAN=648;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:26:63:68.3:68.3,0,88.1:26:0:-68.12:68.29\n8\t144620589\t482943:2\tC\tC[8:144619941[\t68\tPASS\tEVDNC=ASSMB;HOMSEQ=TGAGAGCATGTGTGCC;MAPQ=60;MATEID=482943:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_144599001_144624001_44C;SPAN=648;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:26:63:68.3:68.3,0,88.1:26:0:-68.12:68.29\n8\t145021387\t483041:1\tT\t]8:145028047]T\t99\tPASS\tDISC_MAPQ=49;EVDNC=DSCRD;IMPRECISE;MAPQ=49;MATEID=483041:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=8:145021387(-)-8:145028047(+)__8_145015501_145040501D;SPAN=6660;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:43:63:32:124.4,0,32:0:43:-127.1:127.1\n8\t145028047\t483041:2\tG\tG[8:145021387[\t99\tPASS\tDISC_MAPQ=58;EVDNC=DSCRD;IMPRECISE;MAPQ=58;MATEID=483041:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=8:145021387(-)-8:145028047(+)__8_145015501_145040501D;SPAN=6660;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:43:63:32:124.4,0,32:0:43:-127.1:127.1\n9\t320206\t483191:1\tA\tA[9:322353[\t92\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AACACTCACGGAAAAAGCCCAGGTTCTGTGATCAGAGATGGCTGGGCTCAAAACCTGACCGAACACTCACGGAAAAAGCCCAGGTTCTGTGATCAGAGATGGCTGGGCTCA;MAPQ=60;MATEID=483191:2;MATENM=2;NM=1;NUMPARTS=2;SCTG=c_9_318501_343501_0C;SPAN=2147;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:31:4:8.4:92.4,8.4,0:9:22:-92.42:92.42\n9\t322353\t483191:2\tA\t]9:320206]A\t92\tPASS\tDISC_MAPQ=51;EVDNC=ASDIS;HOMSEQ=AACACTCACGGAAAAAGCCCAGGTTCTGTGATCAGAGATGGCTGGGCTCAAAACCTGACCGAACACTCACGGAAAAAGCCCAGGTTCTGTGATCAGAGATGGCTGGGCTCA;MAPQ=60;MATEID=483191:1;MATENM=1;NM=2;NUMPARTS=2;SCTG=c_9_318501_343501_0C;SPAN=2147;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:31:4:8.4:92.4,8.4,0:9:22:-92.42:92.42\n9\t584229\t483259:2\tA\t]4:97127269]A\t30\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=A;MAPQ=60;MATEID=483259:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_563501_588501_1C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:22:23.6:30.2,0,23.6:6:5:-30.15:30.15\n9\t584347\t483264:1\tG\tG[9:1096692[\t24\tPASS\tEVDNC=ASSMB;HOMSEQ=AGG;MAPQ=60;MATEID=483264:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_563501_588501_8C;SPAN=512345;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:20:24.2:24.2,0,24.2:9:0:-24.09:24.09\n9\t793721\t483347:1\tG\tG[9:794383[\t39\tPASS\tDISC_MAPQ=56;EVDNC=ASDIS;HOMSEQ=CCCTTTCTGCTTAAACTGGCTTGAGTGAATTCTGTTGTCTGCAACTAAAAACACTAATCCACATAAGATCCTTGGTTTTATTTACTGATGCTCTAGTCACTTGCCATTTTCTACTGAATTCTCCTTTTCTCCTCATTAGGATCCCTATGTCAATGCTCTGTCCCTGCCTCTAG;MAPQ=60;MATEID=483347:2;MATENM=4;NM=6;NUMPARTS=2;SCTG=c_9_784001_809001_19C;SPAN=662;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:13:0:3.6:39.6,3.6,0:0:13:-39.61:39.61\n9\t794383\t483347:2\tC\t]9:793721]C\t39\tPASS\tDISC_MAPQ=56;EVDNC=ASDIS;HOMSEQ=CCCTTTCTGCTTAAACTGGCTTGAGTGAATTCTGTTGTCTGCAACTAAAAACACTAATCCACATAAGATCCTTGGTTTTATTTACTGATGCTCTAGTCACTTGCCATTTTCTACTGAATTCTCCTTTTCTCCTCATTAGGATCCCTATGTCAATGCTCTGTCCCTGCCTCTAG;MAPQ=60;MATEID=483347:1;MATENM=6;NM=4;NUMPARTS=2;SCTG=c_9_784001_809001_19C;SPAN=662;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:13:0:3.6:39.6,3.6,0:0:13:-39.61:39.61\n9\t1096692\t483264:2\tA\t]9:584347]A\t24\tPASS\tEVDNC=ASSMB;HOMSEQ=AGG;MAPQ=60;MATEID=483264:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_563501_588501_8C;SPAN=512345;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:20:24.2:24.2,0,24.2:9:0:-24.09:24.09\n9\t2279343\t483943:1\tT\tT]9:3813164]\t23\tPASS\tDISC_MAPQ=35;EVDNC=DSCRD;IMPRECISE;MAPQ=35;MATEID=483943:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=9:2279343(+)-9:3813164(+)__9_3797501_3822501D;SPAN=1533821;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:8:8:2.1:23.1,2.1,0:0:8:-23.11:23.11\n9\t3813164\t483943:2\tT\tT]9:2279343]\t23\tPASS\tDISC_MAPQ=25;EVDNC=DSCRD;IMPRECISE;MAPQ=25;MATEID=483943:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=9:2279343(+)-9:3813164(+)__9_3797501_3822501D;SPAN=1533821;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:8:8:2.1:23.1,2.1,0:0:8:-23.11:23.11\n9\t6888787\t484745:1\tT\tT[9:6889088[\t46\tPASS\tEVDNC=ASSMB;HOMSEQ=CTTCTGTGTTTTTT;MAPQ=60;MATEID=484745:2;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_9_6884501_6909501_8C;SPAN=301;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:15:18:1.5:46.2,1.5,0:15:0:-47.02:47.02\n9\t6889088\t484745:2\tC\t]9:6888787]C\t46\tPASS\tEVDNC=ASSMB;HOMSEQ=CTTCTGTGTTTTTT;MAPQ=60;MATEID=484745:1;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_9_6884501_6909501_8C;SPAN=301;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:15:18:1.5:46.2,1.5,0:15:0:-47.02:47.02\n9\t7367657\t484878:1\tC\t]9:7439854]C\t62\tPASS\tEVDNC=ASSMB;INSERTION=TAT;MAPQ=60;MATEID=484878:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_7423501_7448501_17C;SPAN=72197;SUBN=2;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:19:21:5.7:62.7,5.7,0:19:0:-61.54:61.54\n9\t7439854\t484878:2\tG\tG[9:7367657[\t62\tPASS\tEVDNC=ASSMB;INSERTION=TAT;MAPQ=60;MATEID=484878:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_7423501_7448501_17C;SPAN=72197;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:19:21:5.7:62.7,5.7,0:19:0:-61.54:61.54\n9\t7741406\t288543:2\tC\tC[5:39787650[\t64\tPASS\tDISC_MAPQ=55;EVDNC=ASDIS;INSERTION=GAGTT;MAPQ=60;MATEID=288543:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_5_39763501_39788501_1C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:22:28:5.3:64.7,0,5.3:20:12:-67.65:67.65\n9\t8826067\t485180:1\tA\t]9:8868077]A\t79\tPASS\tEVDNC=ASSMB;INSERTION=TT;MAPQ=60;MATEID=485180:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_9_8844501_8869501_18C;SPAN=42010;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:26:21:7.2:79.2,7.2,0:26:0:-79.22:79.22\n9\t8868077\t485180:2\tG\tG[9:8826067[\t79\tPASS\tEVDNC=ASSMB;INSERTION=TT;MAPQ=60;MATEID=485180:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_9_8844501_8869501_18C;SPAN=42010;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:26:21:7.2:79.2,7.2,0:26:0:-79.22:79.22\n9\t9054481\t485408:1\tT\tT[9:9712574[\t92\tPASS\tEVDNC=ASSMB;INSERTION=GGCAGTTGAAATAGTAGATATAAAATTATCATGACGTTTACCAGTAATATTTATGAT;MAPQ=60;MATEID=485408:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_9702001_9727001_28C;SPAN=658093;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:30:14:8.4:92.4,8.4,0:30:0:-92.42:92.42\n9\t9712574\t485408:2\tA\t]9:9054481]A\t92\tPASS\tEVDNC=ASSMB;INSERTION=GGCAGTTGAAATAGTAGATATAAAATTATCATGACGTTTACCAGTAATATTTATGAT;MAPQ=60;MATEID=485408:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_9702001_9727001_28C;SPAN=658093;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:30:14:8.4:92.4,8.4,0:30:0:-92.42:92.42\n9\t10098711\t485469:2\tA\tA[4:117217096[\t23\tPASS\tDISC_MAPQ=59;EVDNC=DSCRD;IMPRECISE;MAPQ=59;MATEID=485469:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=4:117217096(-)-9:10098711(+)__9_10094001_10119001D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:8:7:2.1:23.1,2.1,0:0:8:-23.11:23.11\n9\t10841158\t485690:2\tT\t]4:155419067]T\t20\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=485690:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_10829001_10854001_13C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:23:20:20,0,36.5:8:0:-19.94:20.25\n9\t10945775\t489659:1\tA\tA[9:30287949[\t36\tPASS\tEVDNC=ASSMB;HOMSEQ=AAGA;MAPQ=60;MATEID=489659:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_30282001_30307001_17C;SPAN=19342174;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:12:10:3.3:36.3,3.3,0:12:0:-36.31:36.31\n9\t11384325\t485861:2\tG\tG[8:245406[\t25\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=GTG;MAPQ=60;MATEID=485861:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_11368001_11393001_5C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:17:15.2:25.1,0,15.2:4:6:-24.99:24.99\n9\t15815423\t486901:1\tT\tT[9:15821942[\t72\tPASS\tDISC_MAPQ=59;EVDNC=DSCRD;IMPRECISE;MAPQ=59;MATEID=486901:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=9:15815423(+)-9:15821942(-)__9_15802501_15827501D;SPAN=6519;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:24:4:6.6:72.6,6.6,0:0:24:-72.62:72.62\n9\t15821942\t486901:2\tG\t]9:15815423]G\t72\tPASS\tDISC_MAPQ=46;EVDNC=DSCRD;IMPRECISE;MAPQ=46;MATEID=486901:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=9:15815423(+)-9:15821942(-)__9_15802501_15827501D;SPAN=6519;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:24:4:6.6:72.6,6.6,0:0:24:-72.62:72.62\n9\t21837129\t488016:1\tT\tT[9:22081242[\t29\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=488016:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=9:21837129(+)-9:22081242(-)__9_22074501_22099501D;SPAN=244113;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:10:6:2.7:29.7,2.7,0:0:10:-29.71:29.71\n9\t21841795\t327574:2\tA\tA[6:13128174[\t49\tPASS\tDISC_MAPQ=0;EVDNC=TSI_L;HOMSEQ=ATCACATCACAGGACTCTTTGCAGACATCCCCCAGCATCAGCTCAGACAGAGCCTGTTGCCCTGCTGAGTGGCTAGACCCAGAAGAGCAATAACAGTCACTGCAGTCCAGGTCTCAAGAAGCCCCATCCCTAGGGGAAGGGGGAGAGCACAACATCAAGGGGTCACCCCTTGGGACAAGAAAATCTGAACAGCAGCCCTTGAGTTTCAAACTTCTC;INSERTION=ACTTCTC;MAPQ=33;MATEID=327574:1;MATENM=0;NM=8;NUMPARTS=4;REPSEQ=CTCT;SCTG=c_6_13107501_13132501_88C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:17:16:4.5:49.5,4.5,0:13:6:-49.51:49.51\n9\t22081242\t488016:2\tC\t]9:21837129]C\t29\tPASS\tDISC_MAPQ=59;EVDNC=DSCRD;IMPRECISE;MAPQ=59;MATEID=488016:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=9:21837129(+)-9:22081242(-)__9_22074501_22099501D;SPAN=244113;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:10:6:2.7:29.7,2.7,0:0:10:-29.71:29.71\n9\t22496528\t488102:1\tT\tT[9:22504346[\t49\tPASS\tEVDNC=ASSMB;INSERTION=T;MAPQ=60;MATEID=488102:2;MATENM=8;NM=2;NUMPARTS=2;SCTG=c_9_22491001_22516001_0C;SPAN=7818;SUBN=1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:17:10:4.5:49.5,4.5,0:17:0:-49.51:49.51\n9\t22504346\t488102:2\tC\t]9:22496528]C\t49\tPASS\tEVDNC=ASSMB;INSERTION=T;MAPQ=60;MATEID=488102:1;MATENM=2;NM=8;NUMPARTS=2;SCTG=c_9_22491001_22516001_0C;SPAN=7818;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:17:10:4.5:49.5,4.5,0:17:0:-49.51:49.51\n9\t23362803\t488288:1\tA\tA[9:23377688[\t42\tPASS\tEVDNC=ASSMB;INSERTION=GA;MAPQ=60;MATEID=488288:2;MATENM=4;NM=1;NUMPARTS=2;SCTG=c_9_23373001_23398001_1C;SPAN=14885;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:14:3:3.9:42.9,3.9,0:14:0:-42.91:42.91\n9\t23377688\t488288:2\tT\t]9:23362803]T\t42\tPASS\tEVDNC=ASSMB;INSERTION=GA;MAPQ=60;MATEID=488288:1;MATENM=1;NM=4;NUMPARTS=2;SCTG=c_9_23373001_23398001_1C;SPAN=14885;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:14:3:3.9:42.9,3.9,0:14:0:-42.91:42.91\n9\t24546560\t123497:2\tG\tG]2:162753054]\t17\tPASS\tDISC_MAPQ=55;EVDNC=DSCRD;IMPRECISE;MAPQ=55;MATEID=123497:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=2:162753054(+)-9:24546560(+)__2_162729001_162754001D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:34:17:17,0,66.5:0:8:-16.85:18.63\n9\t24908456\t488516:1\tG\t]9:24908668]G\t24\tPASS\tEVDNC=ASSMB;HOMSEQ=GA;MAPQ=60;MATEID=488516:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_24892001_24917001_15C;SPAN=212;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:31:24.5:24.5,0,50.9:10:0:-24.3:24.91\n9\t24908668\t488516:2\tA\tA[9:24908456[\t24\tPASS\tEVDNC=ASSMB;HOMSEQ=GA;MAPQ=60;MATEID=488516:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_24892001_24917001_15C;SPAN=212;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:31:24.5:24.5,0,50.9:10:0:-24.3:24.91\n9\t24980783\t488542:1\tG\tG]Un_KN707681v1_decoy:4379]\t36\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=488542:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_9_24965501_24990501_4C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:12:10:3.3:36.3,3.3,0:12:0:-36.31:36.31\n9\t25849461\t12984:2\tT\t]1:53953226]T\t22\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;MAPQ=60;MATEID=12984:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_53949001_53974001_66C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:39:22.1:22.1,0,74.9:6:6:-22.05:23.72\n9\t26921863\t488914:1\tT\tT[9:27029400[\t46\tPASS\tEVDNC=ASSMB;HOMSEQ=AT;MAPQ=60;MATEID=488914:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_27023501_27048501_9C;SPAN=107537;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:15:10:4.2:46.2,4.2,0:15:0:-46.21:46.21\n9\t27029400\t488914:2\tA\t]9:26921863]A\t46\tPASS\tEVDNC=ASSMB;HOMSEQ=AT;MAPQ=60;MATEID=488914:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_27023501_27048501_9C;SPAN=107537;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:15:10:4.2:46.2,4.2,0:15:0:-46.21:46.21\n9\t28733895\t489296:1\tA\t]9:28736771]A\t24\tPASS\tEVDNC=ASSMB;HOMSEQ=AC;MAPQ=60;MATEID=489296:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_9_28714001_28739001_0C;SPAN=2876;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:19:21.2:24.5,0,21.2:9:0:-24.37:24.37\n9\t28736771\t489296:2\tC\tC[9:28733895[\t24\tPASS\tEVDNC=ASSMB;HOMSEQ=AC;MAPQ=60;MATEID=489296:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_9_28714001_28739001_0C;SPAN=2876;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:19:21.2:24.5,0,21.2:9:0:-24.37:24.37\n9\t29653849\t13059:2\tA\tA[1:53954656[\t7\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=13059:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_53949001_53974001_206C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:90:7.7:7.7,0,218.9:10:0:-7.712:19.71\n9\t29661186\t489518:1\tA\tA[9:29664028[\t25\tPASS\tEVDNC=ASSMB;HOMSEQ=TA;MAPQ=60;MATEID=489518:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_29645001_29670001_21C;SPAN=2842;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:16:12.2:25.4,0,12.2:9:0:-25.35:25.35\n9\t29664028\t489518:2\tT\t]9:29661186]T\t25\tPASS\tEVDNC=ASSMB;HOMSEQ=TA;MAPQ=60;MATEID=489518:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_29645001_29670001_21C;SPAN=2842;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:16:12.2:25.4,0,12.2:9:0:-25.35:25.35\n9\t30287949\t489659:2\tA\t]9:10945775]A\t36\tPASS\tEVDNC=ASSMB;HOMSEQ=AAGA;MAPQ=60;MATEID=489659:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_30282001_30307001_17C;SPAN=19342174;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:12:10:3.3:36.3,3.3,0:12:0:-36.31:36.31\n9\t30288138\t489652:2\tG\t]4:145607589]G\t40\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=489652:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_30282001_30307001_41C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:22:13.7:40.1,0,13.7:14:0:-40.63:40.63\n9\t30288184\t702277:1\tT\tT[14:64280428[\t33\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=702277:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_64263501_64288501_38C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:22:20.3:33.5,0,20.3:12:0:-33.55:33.55\n9\t30288228\t489646:2\tG\t[4:124756824[G\t34\tPASS\tDISC_MAPQ=60;EVDNC=TSI_L;HOMSEQ=AGGA;INSERTION=AAC;MAPQ=60;MATEID=489646:1;MATENM=0;NM=0;NUMPARTS=3;REPSEQ=CAACAA;SCTG=c_9_30282001_30307001_59C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:16:25:11.3:34.7,0,11.3:16:2:-35.31:35.31\n9\t30288439\t489643:2\tT\tT]4:105671811]\t56\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=ATGT;MAPQ=60;MATEID=489643:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_30282001_30307001_56C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:19:10:5.1:56.1,5.1,0:14:5:-56.11:56.11\n9\t30690082\t945666:1\tT\tT]X:136874391]\t32\tPASS\tDISC_MAPQ=15;EVDNC=DSCRD;IMPRECISE;MAPQ=15;MATEID=945666:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=9:30690082(+)-23:136874391(+)__23_136857001_136882001D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:16:5.6:32,0,5.6:0:11:-32.57:32.57\n9\t33423378\t490422:1\tT\tT[9:33424657[\t23\tPASS\tEVDNC=ASSMB;HOMSEQ=AAGAATCTAGTTTTT;MAPQ=60;MATEID=490422:2;MATENM=1;NM=2;NUMPARTS=2;SCTG=c_9_33418001_33443001_20C;SPAN=1279;SUBN=6;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:7:8:2.1:23.1,2.1,0:7:0:-22.34:22.34\n9\t33424657\t490422:2\tA\t]9:33423378]A\t23\tPASS\tEVDNC=ASSMB;HOMSEQ=AAGAATCTAGTTTTT;MAPQ=60;MATEID=490422:1;MATENM=2;NM=1;NUMPARTS=2;SCTG=c_9_33418001_33443001_20C;SPAN=1279;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:7:8:2.1:23.1,2.1,0:7:0:-22.34:22.34\n9\t34681484\t490777:1\tT\t]9:34681981]T\t72\tPASS\tEVDNC=ASSMB;HOMSEQ=TG;MAPQ=60;MATEID=490777:2;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_9_34667501_34692501_8C;SPAN=497;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:24:28:1.2:72.6,1.2,0:24:0:-76:76\n9\t34681981\t490777:2\tG\tG[9:34681484[\t72\tPASS\tEVDNC=ASSMB;HOMSEQ=TG;MAPQ=60;MATEID=490777:1;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_9_34667501_34692501_8C;SPAN=497;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:24:28:1.2:72.6,1.2,0:24:0:-76:76\n9\t36362899\t491079:1\tT\tT[9:36364083[\t75\tPASS\tDISC_MAPQ=50;EVDNC=ASDIS;HOMSEQ=GCCTCCCAAAGTGCT;MAPQ=60;MATEID=491079:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_9_36358001_36383001_4C;SPAN=1184;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:25:8:6.9:75.9,6.9,0:17:15:-75.92:75.92\n9\t36364083\t491079:2\tG\t]9:36362899]G\t75\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=GCCTCCCAAAGTGCT;MAPQ=60;MATEID=491079:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_9_36358001_36383001_4C;SPAN=1184;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:25:8:6.9:75.9,6.9,0:17:15:-75.92:75.92\n9\t36423668\t491100:1\tG\t]13:73390558]G\t56\tPASS\tDISC_MAPQ=4;EVDNC=ASDIS;HOMSEQ=G;MAPQ=22;MATEID=491100:2;MATENM=1;NM=2;NUMPARTS=2;SCTG=c_9_36407001_36432001_29C;SPAN=-1;SUBN=1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:19:7:5.1:56.1,5.1,0:14:6:-56.11:56.11\n9\t37090389\t491310:1\tA\t]9:37377642]A\t29\tPASS\tDISC_MAPQ=59;EVDNC=DSCRD;IMPRECISE;MAPQ=59;MATEID=491310:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=9:37090389(-)-9:37377642(+)__9_37362501_37387501D;SPAN=287253;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:10:8:2.7:29.7,2.7,0:0:10:-29.71:29.71\n9\t37377642\t491310:2\tG\tG[9:37090389[\t29\tPASS\tDISC_MAPQ=58;EVDNC=DSCRD;IMPRECISE;MAPQ=58;MATEID=491310:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=9:37090389(-)-9:37377642(+)__9_37362501_37387501D;SPAN=287253;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:10:8:2.7:29.7,2.7,0:0:10:-29.71:29.71\n9\t40899697\t492400:1\tA\tA[9:40902847[\t36\tPASS\tDISC_MAPQ=34;EVDNC=DSCRD;IMPRECISE;MAPQ=34;MATEID=492400:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=9:40899697(+)-9:40902847(-)__9_40890501_40915501D;SPAN=3150;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:22:17:36.8,0,17:0:13:-37.05:37.05\n9\t40902847\t492400:2\tT\t]9:40899697]T\t36\tPASS\tDISC_MAPQ=41;EVDNC=DSCRD;IMPRECISE;MAPQ=41;MATEID=492400:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=9:40899697(+)-9:40902847(-)__9_40890501_40915501D;SPAN=3150;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:22:17:36.8,0,17:0:13:-37.05:37.05\n9\t40923207\t492711:1\tC\tC[9:40924335[\t25\tPASS\tEVDNC=ASSMB;HOMSEQ=GGATTCCAGAACACTCCTGC;MAPQ=60;MATEID=492711:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_40915001_40940001_43C;SPAN=1128;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:74:25.4:25.4,0,160.7:14:0:-25.41:31.1\n9\t40924335\t492711:2\tG\t]9:40923207]G\t25\tPASS\tEVDNC=ASSMB;HOMSEQ=GGATTCCAGAACACTCCTGC;MAPQ=60;MATEID=492711:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_40915001_40940001_43C;SPAN=1128;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:74:25.4:25.4,0,160.7:14:0:-25.41:31.1\n9\t40929455\t492742:1\tA\tA]9:63918421]\t28\tPASS\tDISC_MAPQ=54;EVDNC=DSCRD;IMPRECISE;MAPQ=54;MATEID=492742:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=9:40929455(+)-9:63918421(+)__9_40915001_40940001D;SPAN=22988966;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:29:28.1:28.1,0,44.6:0:11:-28.16:28.37\n9\t41047840\t232702:2\tT\tT[4:61939924[\t26\tPASS\tDISC_MAPQ=20;EVDNC=ASDIS;HOMSEQ=TTT;MAPQ=44;MATEID=232702:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_61936001_61961001_17C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:9:8:2.4:26.4,2.4,0:8:5:-26.41:26.41\n9\t41237750\t495356:1\tG\tG[9:62802569[\t33\tPASS\tDISC_MAPQ=52;EVDNC=DSCRD;IMPRECISE;MAPQ=52;MATEID=495356:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=9:41237750(+)-9:62802569(-)__9_62793501_62818501D;SPAN=21564819;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:15:57:33.5:33.5,0,109.4:0:15:-33.49:35.77\n9\t42258584\t493761:1\tG\tG[9:42259464[\t47\tPASS\tDISC_MAPQ=25;EVDNC=DSCRD;IMPRECISE;MAPQ=25;MATEID=493761:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=9:42258584(+)-9:42259464(-)__9_42238001_42263001D;SPAN=880;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:17:29:24.8:47.9,0,24.8:0:17:-48.35:48.35\n9\t42259464\t493761:2\tA\t]9:42258584]A\t47\tPASS\tDISC_MAPQ=19;EVDNC=DSCRD;IMPRECISE;MAPQ=19;MATEID=493761:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=9:42258584(+)-9:42259464(-)__9_42238001_42263001D;SPAN=880;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:17:29:24.8:47.9,0,24.8:0:17:-48.35:48.35\n9\t42387022\t493824:1\tT\tT[9:42387326[\t43\tPASS\tEVDNC=ASSMB;HOMSEQ=AATTTGTGT;MAPQ=60;MATEID=493824:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_9_42385001_42410001_40C;SPAN=304;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:16:34:40.1:43.4,0,40.1:16:0:-43.26:43.26\n9\t42387326\t493824:2\tA\t]9:42387022]A\t43\tPASS\tEVDNC=ASSMB;HOMSEQ=AATTTGTGT;MAPQ=60;MATEID=493824:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_9_42385001_42410001_40C;SPAN=304;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:16:34:40.1:43.4,0,40.1:16:0:-43.26:43.26\n9\t43197994\t494276:1\tT\t]9:43199957]T\t99\tPASS\tDISC_MAPQ=43;EVDNC=DSCRD;IMPRECISE;MAPQ=43;MATEID=494276:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=9:43197994(-)-9:43199957(+)__9_43193501_43218501D;SPAN=1963;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:50:47:13.8:151.8,13.8,0:0:50:-151.8:151.8\n9\t43199957\t494276:2\tT\tT[9:43197994[\t99\tPASS\tDISC_MAPQ=40;EVDNC=DSCRD;IMPRECISE;MAPQ=40;MATEID=494276:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=9:43197994(-)-9:43199957(+)__9_43193501_43218501D;SPAN=1963;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:50:47:13.8:151.8,13.8,0:0:50:-151.8:151.8\n9\t45021766\t494722:1\tC\t]9:45152397]C\t42\tPASS\tDISC_MAPQ=25;EVDNC=DSCRD;IMPRECISE;MAPQ=25;MATEID=494722:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=9:45021766(-)-9:45152397(+)__9_45129001_45154001D;SPAN=130631;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:14:6:3.9:42.9,3.9,0:0:14:-42.91:42.91\n9\t45152397\t494722:2\tT\tT[9:45021766[\t42\tPASS\tDISC_MAPQ=32;EVDNC=DSCRD;IMPRECISE;MAPQ=32;MATEID=494722:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=9:45021766(-)-9:45152397(+)__9_45129001_45154001D;SPAN=130631;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:14:6:3.9:42.9,3.9,0:0:14:-42.91:42.91\n9\t61735346\t873198:1\tA\tA[20:29636132[\t36\tPASS\tDISC_MAPQ=45;EVDNC=DSCRD;IMPRECISE;MAPQ=45;MATEID=873198:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=9:61735346(+)-20:29636132(-)__20_29620501_29645501D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:23:20:36.5,0,20:0:13:-36.66:36.66\n9\t62802569\t495356:2\tG\t]9:41237750]G\t33\tPASS\tDISC_MAPQ=24;EVDNC=DSCRD;IMPRECISE;MAPQ=24;MATEID=495356:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=9:41237750(+)-9:62802569(-)__9_62793501_62818501D;SPAN=21564819;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:15:57:33.5:33.5,0,109.4:0:15:-33.49:35.77\n9\t63843968\t870923:1\tC\tC]20:29090598]\t39\tPASS\tDISC_MAPQ=19;EVDNC=DSCRD;IMPRECISE;MAPQ=19;MATEID=870923:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=9:63843968(+)-20:29090598(+)__20_29081501_29106501D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:19:83:39.5:39.5,0,168.2:0:19:-39.39:43.98\n9\t63918421\t492742:2\tG\tG]9:40929455]\t28\tPASS\tDISC_MAPQ=48;EVDNC=DSCRD;IMPRECISE;MAPQ=48;MATEID=492742:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=9:40929455(+)-9:63918421(+)__9_40915001_40940001D;SPAN=22988966;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:29:28.1:28.1,0,44.6:0:11:-28.16:28.37\n9\t65079191\t822950:1\tT\tT[18:15598663[\t23\tPASS\tDISC_MAPQ=54;EVDNC=DSCRD;IMPRECISE;MAPQ=54;MATEID=822950:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=9:65079191(+)-18:15598663(-)__18_15582001_15607001D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:12:6.5:23,0,6.5:0:8:-23.49:23.49\n9\t65437620\t496905:2\tT\t[4:3594169[T\t23\tPASS\tDISC_MAPQ=26;EVDNC=DSCRD;IMPRECISE;MAPQ=26;MATEID=496905:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=4:3594169(-)-9:65437620(-)__9_65415001_65440001D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:8:7:2.1:23.1,2.1,0:0:8:-23.11:23.11\n9\t69123206\t497862:1\tC\tC[9:69128439[\t59\tPASS\tEVDNC=ASSMB;HOMSEQ=AC;MAPQ=60;MATEID=497862:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_69114501_69139501_19C;SPAN=5233;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:20:9:5.4:59.4,5.4,0:20:0:-59.41:59.41\n9\t69128439\t497862:2\tA\t]9:69123206]A\t59\tPASS\tEVDNC=ASSMB;HOMSEQ=AC;MAPQ=60;MATEID=497862:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_69114501_69139501_19C;SPAN=5233;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:20:9:5.4:59.4,5.4,0:20:0:-59.41:59.41\n9\t69278069\t404355:2\tT\t]7:72499762]T\t13\tPASS\tDISC_MAPQ=17;EVDNC=DSCRD;IMPRECISE;MAPQ=17;MATEID=404355:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:72499762(+)-9:69278069(-)__7_72495501_72520501D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:46:13.7:13.7,0,99.5:0:8:-13.48:17.45\n9\t69280450\t497903:1\tT\tT[9:69281647[\t39\tPASS\tDISC_MAPQ=50;EVDNC=DSCRD;IMPRECISE;MAPQ=50;MATEID=497903:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=9:69280450(+)-9:69281647(-)__9_69261501_69286501D;SPAN=1197;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:12:13:3.6:39.6,3.6,0:0:12:-39.28:39.28\n9\t69281647\t497903:2\tT\t]9:69280450]T\t39\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=497903:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=9:69280450(+)-9:69281647(-)__9_69261501_69286501D;SPAN=1197;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:12:13:3.6:39.6,3.6,0:0:12:-39.28:39.28\n9\t74283223\t499130:1\tA\t[9:74283474[A\t75\tPASS\tDISC_MAPQ=255;EVDNC=TSI_L;INSERTION=ACCTTCAAAGGCTGCAATTGGCCAGTTTGCTGAAGCAGCATTGCTGATTAGTTGATTAAATTAATAAAATGGGGCTTTTGCTACCACTGCATTATCAAAGTGTTACCCAACGATAAGTCCTTGAAAATATGTAAAATAAGTTAAAAGAGAGAAGAAACTGAGAAAGCCATTCATGACCACTGACAGAATTATGTCTCCATGGTGGGCTGGCAGGGCAGAGCAGTGGCCCTCTGCTGTGATCCCCTTCAAAGAACCCCCTGAGCCACCCAAAGAAAGCTGATGTGTCCACGGTTCTGTTCTTTTCAGGGGTAGATGTAGGTGGG;MAPQ=60;MATEID=499130:2;MATENM=9;NM=1;NUMPARTS=3;REPSEQ=GGG;SCTG=c_9_74284001_74309001_0C;SPAN=251;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:25:0:6.9:75.9,6.9,0:25:0:-75.92:75.92\n9\t74283474\t499130:2\tG\t[9:74283223[G\t75\tPASS\tDISC_MAPQ=255;EVDNC=TSI_L;INSERTION=ACCTTCAAAGGCTGCAATTGGCCAGTTTGCTGAAGCAGCATTGCTGATTAGTTGATTAAATTAATAAAATGGGGCTTTTGCTACCACTGCATTATCAAAGTGTTACCCAACGATAAGTCCTTGAAAATATGTAAAATAAGTTAAAAGAGAGAAGAAACTGAGAAAGCCATTCATGACCACTGACAGAATTATGTCTCCATGGTGGGCTGGCAGGGCAGAGCAGTGGCCCTCTGCTGTGATCCCCTTCAAAGAACCCCCTGAGCCACCCAAAGAAAGCTGATGTGTCCACGGTTCTGTTCTTTTCAGGGGTAGATGTAGGTGGG;MAPQ=60;MATEID=499130:1;MATENM=1;NM=9;NUMPARTS=3;REPSEQ=GGG;SCTG=c_9_74284001_74309001_0C;SPAN=251;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:25:0:6.9:75.9,6.9,0:25:0:-75.92:75.92\n9\t75533771\t885083:1\tT\t[20:52043400[T\t52\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;MAPQ=60;MATEID=885083:2;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_20_52038001_52063001_156C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:19:36:36.2:52.7,0,36.2:14:14:-52.72:52.72\n9\t76304638\t499637:1\tT\tT[9:76307080[\t19\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=499637:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=9:76304638(+)-9:76307080(-)__9_76293001_76318001D;SPAN=2442;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:26:19.1:19.1,0,45.5:0:8:-19.1:19.73\n9\t76307080\t499637:2\tA\t]9:76304638]A\t19\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=499637:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=9:76304638(+)-9:76307080(-)__9_76293001_76318001D;SPAN=2442;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:26:19.1:19.1,0,45.5:0:8:-19.1:19.73\n9\t76940846\t499922:1\tA\tA[9:76943186[\t66\tPASS\tEVDNC=ASSMB;HOMSEQ=TAA;MAPQ=60;MATEID=499922:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_76930001_76955001_81C;SPAN=2340;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:23:33:14:66.8,0,14:23:0:-68.34:68.34\n9\t76943186\t499922:2\tT\t]9:76940846]T\t66\tPASS\tEVDNC=ASSMB;HOMSEQ=TAA;MAPQ=60;MATEID=499922:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_76930001_76955001_81C;SPAN=2340;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:23:33:14:66.8,0,14:23:0:-68.34:68.34\n9\t79110862\t500588:1\tT\tT[9:79111167[\t33\tPASS\tEVDNC=ASSMB;HOMSEQ=CTAATGCAGGATTTTCT;MAPQ=60;MATEID=500588:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_9_79110501_79135501_48C;SPAN=305;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:22:20.3:33.5,0,20.3:12:0:-33.55:33.55\n9\t79111167\t500588:2\tC\t]9:79110862]C\t33\tPASS\tEVDNC=ASSMB;HOMSEQ=CTAATGCAGGATTTTCT;MAPQ=60;MATEID=500588:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_9_79110501_79135501_48C;SPAN=305;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:22:20.3:33.5,0,20.3:12:0:-33.55:33.55\n9\t80230263\t500915:1\tT\tT[9:80230583[\t35\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TTTTTCTT;MAPQ=60;MATEID=500915:2;MATENM=1;NM=3;NUMPARTS=2;SCTG=c_9_80213001_80238001_109C;SPAN=320;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:28:35:35,0,35:7:9:-35.04:35.04\n9\t80230583\t500915:2\tT\t]9:80230263]T\t35\tPASS\tDISC_MAPQ=54;EVDNC=ASDIS;HOMSEQ=TTTTTCTT;MAPQ=60;MATEID=500915:1;MATENM=3;NM=1;NUMPARTS=2;SCTG=c_9_80213001_80238001_109C;SPAN=320;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:28:35:35,0,35:7:9:-35.04:35.04\n9\t81353010\t501453:1\tC\tC[9:81355769[\t60\tPASS\tEVDNC=ASSMB;HOMSEQ=TTTATAGC;MAPQ=60;MATEID=501453:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_81340001_81365001_30C;SPAN=2759;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:21:33:20.6:60.2,0,20.6:21:0:-60.95:60.95\n9\t81355769\t501453:2\tT\t]9:81353010]T\t60\tPASS\tEVDNC=ASSMB;HOMSEQ=TTTATAGC;MAPQ=60;MATEID=501453:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_81340001_81365001_30C;SPAN=2759;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:21:33:20.6:60.2,0,20.6:21:0:-60.95:60.95\n9\t81709448\t501562:1\tC\tC[9:81712012[\t7\tPASS\tEVDNC=ASSMB;HOMSEQ=TAAAATGGCTCTAGC;MAPQ=60;MATEID=501562:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_81707501_81732501_4C;SPAN=2564;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:27:292:7.3:7.3,0,726.8:27:0:-7.048:50.93\n9\t81712012\t501562:2\tT\t]9:81709448]T\t7\tPASS\tEVDNC=ASSMB;HOMSEQ=TAAAATGGCTCTAGC;MAPQ=60;MATEID=501562:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_81707501_81732501_4C;SPAN=2564;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:27:292:7.3:7.3,0,726.8:27:0:-7.048:50.93\n9\t83888182\t502921:1\tC\t[9:85841178[C\t14\tPASS\tDISC_MAPQ=51;EVDNC=DSCRD;IMPRECISE;MAPQ=51;MATEID=502921:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=9:83888182(-)-9:85841178(-)__9_85823501_85848501D;SPAN=1952996;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:41:14.9:14.9,0,87.5:0:8:-14.88:17.89\n9\t85286501\t502766:1\tT\tT[9:85286798[\t41\tPASS\tEVDNC=ASSMB;HOMSEQ=TACATGTCTTT;MAPQ=60;MATEID=502766:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_85284501_85309501_72C;SPAN=297;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:15:31:34.4:41,0,34.4:15:0:-40.81:40.81\n9\t85286798\t502766:2\tT\t]9:85286501]T\t41\tPASS\tEVDNC=ASSMB;HOMSEQ=TACATGTCTTT;MAPQ=60;MATEID=502766:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_85284501_85309501_72C;SPAN=297;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:15:31:34.4:41,0,34.4:15:0:-40.81:40.81\n9\t85841178\t502921:2\tT\t[9:83888182[T\t14\tPASS\tDISC_MAPQ=58;EVDNC=DSCRD;IMPRECISE;MAPQ=58;MATEID=502921:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=9:83888182(-)-9:85841178(-)__9_85823501_85848501D;SPAN=1952996;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:41:14.9:14.9,0,87.5:0:8:-14.88:17.89\n9\t86052951\t502981:1\tA\t]9:86053805]A\t38\tPASS\tDISC_MAPQ=22;EVDNC=DSCRD;IMPRECISE;MAPQ=22;MATEID=502981:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=9:86052951(-)-9:86053805(+)__9_86044001_86069001D;SPAN=854;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:16:51:38.6:38.6,0,88.1:0:16:-38.48:39.62\n9\t86053805\t502981:2\tA\tA[9:86052951[\t38\tPASS\tDISC_MAPQ=41;EVDNC=DSCRD;IMPRECISE;MAPQ=41;MATEID=502981:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=9:86052951(-)-9:86053805(+)__9_86044001_86069001D;SPAN=854;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:16:51:38.6:38.6,0,88.1:0:16:-38.48:39.62\n9\t86539642\t503199:1\tT\tT[9:86541032[\t99\tPASS\tDISC_MAPQ=60;EVDNC=TSI_G;HOMSEQ=A;INSERTION=TATTGTGGGCCATGCCTTTTGATCATATTAGCTAGCAAGAGCTCCAGGTTTCCTCTCCATAATGAAAATTTTTGAGCCTAACAATAGTCAA;MAPQ=60;MATEID=503199:2;MATENM=3;NM=1;NUMPARTS=3;SCTG=c_9_86534001_86559001_5C;SPAN=1390;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:38:14:10.5:115.5,10.5,0:37:5:-115.5:115.5\n9\t86541032\t503199:2\tA\t]9:86539642]A\t99\tPASS\tDISC_MAPQ=60;EVDNC=TSI_G;HOMSEQ=A;INSERTION=TATTGTGGGCCATGCCTTTTGATCATATTAGCTAGCAAGAGCTCCAGGTTTCCTCTCCATAATGAAAATTTTTGAGCCTAACAATAGTCAA;MAPQ=60;MATEID=503199:1;MATENM=1;NM=3;NUMPARTS=3;SCTG=c_9_86534001_86559001_5C;SPAN=1390;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:38:14:10.5:115.5,10.5,0:37:5:-115.5:115.5\n9\t87184187\t503415:1\tT\tT[9:87184493[\t47\tPASS\tEVDNC=ASSMB;HOMSEQ=AATTTTTTT;MAPQ=60;MATEID=503415:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_87171001_87196001_87C;SPAN=306;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:17:32:30.8:47.3,0,30.8:17:0:-47.25:47.25\n9\t87184493\t503415:2\tA\t]9:87184187]A\t47\tPASS\tEVDNC=ASSMB;HOMSEQ=AATTTTTTT;MAPQ=60;MATEID=503415:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_87171001_87196001_87C;SPAN=306;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:17:32:30.8:47.3,0,30.8:17:0:-47.25:47.25\n9\t88244081\t503895:1\tT\tT[9:88246049[\t99\tPASS\tEVDNC=ASSMB;HOMSEQ=TTATGTACCTTTT;MAPQ=60;MATEID=503895:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_9_88224501_88249501_5C;SPAN=1968;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:45:52:4.5:138.6,4.5,0:45:0:-143:143\n9\t88246049\t503895:2\tT\t]9:88244081]T\t99\tPASS\tEVDNC=ASSMB;HOMSEQ=TTATGTACCTTTT;MAPQ=60;MATEID=503895:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_9_88224501_88249501_5C;SPAN=1968;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:45:52:4.5:138.6,4.5,0:45:0:-143:143\n9\t88370208\t516185:1\tG\t]9:125174450]G\t36\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=516185:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_125170501_125195501_40C;SPAN=36804242;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:23:20:36.5,0,20:13:0:-36.66:36.66\n9\t88370788\t516187:1\tC\tC[9:125174450[\t53\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=516187:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_125170501_125195501_111C;SPAN=36803662;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:18:23:3.5:53,0,3.5:18:0:-55.29:55.29\n9\t88385279\t503963:1\tT\tT[20:47190406[\t35\tPASS\tEVDNC=ASSMB;INSERTION=CAAAGCTAAAAAATGTAGG;MAPQ=60;MATEID=503963:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_88371501_88396501_10C;SPAN=-1;SUBN=2;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:28:35:35,0,35:13:0:-35.04:35.04\n9\t89437208\t504384:2\tA\t]1:109198402]A\t42\tPASS\tEVDNC=ASSMB;INSERTION=ACCATATATATAAATGTATGGCTGGAGA;MAPQ=60;MATEID=504384:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_89425001_89450001_6C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:15:25:19.4:42.5,0,19.4:15:0:-42.9:42.9\n9\t89730120\t504478:1\tA\t]9:89730492]A\t13\tPASS\tDISC_MAPQ=30;EVDNC=DSCRD;IMPRECISE;MAPQ=30;MATEID=504478:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=9:89730120(-)-9:89730492(+)__9_89719001_89744001D;SPAN=372;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:45:13.7:13.7,0,99.5:0:8:-13.76:17.53\n9\t89730492\t504478:2\tG\tG[9:89730120[\t13\tPASS\tDISC_MAPQ=54;EVDNC=DSCRD;IMPRECISE;MAPQ=54;MATEID=504478:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=9:89730120(-)-9:89730492(+)__9_89719001_89744001D;SPAN=372;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:45:13.7:13.7,0,99.5:0:8:-13.76:17.53\n9\t89854059\t509734:1\tT\tT]9:107177389]\t27\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;INSERTION=A;MAPQ=60;MATEID=509734:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_107163001_107188001_56C;SPAN=17323330;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:20:20.9:27.5,0,20.9:9:4:-27.41:27.41\n9\t90432262\t504759:2\tT\tT[8:63059041[\t25\tPASS\tDISC_MAPQ=255;EVDNC=TSI_G;HOMSEQ=TTTTTTTTTGAGACGG;INSERTION=TTTTTTGTTGTTGTTG;MAPQ=60;MATEID=504759:1;MATENM=0;NM=2;NUMPARTS=3;SCTG=c_9_90429501_90454501_9C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:28:25.1:25.1,0,44.9:10:0:-25.14:25.46\n9\t93708073\t505789:1\tC\tC[9:93709183[\t20\tPASS\tEVDNC=ASSMB;HOMSEQ=C;MAPQ=60;MATEID=505789:2;MATENM=4;NM=0;NUMPARTS=2;SCTG=c_9_93688001_93713001_43C;SPAN=1110;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:21:20.6:20.6,0,30.5:8:0:-20.51:20.65\n9\t93709183\t505789:2\tC\t]9:93708073]C\t20\tPASS\tEVDNC=ASSMB;HOMSEQ=C;MAPQ=60;MATEID=505789:1;MATENM=0;NM=4;NUMPARTS=2;SCTG=c_9_93688001_93713001_43C;SPAN=1110;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:21:20.6:20.6,0,30.5:8:0:-20.51:20.65\n9\t93737881\t505800:1\tT\tT[9:93740761[\t49\tPASS\tEVDNC=ASSMB;HOMSEQ=ACT;MAPQ=60;MATEID=505800:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_93737001_93762001_14C;SPAN=2880;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:17:17:4.5:49.5,4.5,0:17:0:-49.51:49.51\n9\t93740761\t505800:2\tA\t]9:93737881]A\t49\tPASS\tEVDNC=ASSMB;HOMSEQ=ACT;MAPQ=60;MATEID=505800:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_93737001_93762001_14C;SPAN=2880;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:17:17:4.5:49.5,4.5,0:17:0:-49.51:49.51\n9\t94543397\t505978:2\tG\t[4:135169406[G\t22\tPASS\tDISC_MAPQ=30;EVDNC=DSCRD;IMPRECISE;MAPQ=30;MATEID=505978:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=4:135169406(-)-9:94543397(-)__9_94521001_94546001D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:14:12.5:22.4,0,12.5:0:8:-22.62:22.62\n9\t96822325\t506693:1\tA\t]9:96896934]A\t58\tPASS\tEVDNC=ASSMB;HOMSEQ=AGT;MAPQ=60;MATEID=506693:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_96873001_96898001_3C;SPAN=74609;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:20:27:8.9:58.4,0,8.9:20:0:-60.44:60.44\n9\t96896934\t506693:2\tT\tT[9:96822325[\t58\tPASS\tEVDNC=ASSMB;HOMSEQ=AGT;MAPQ=60;MATEID=506693:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_96873001_96898001_3C;SPAN=74609;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:20:27:8.9:58.4,0,8.9:20:0:-60.44:60.44\n9\t97902289\t405771:2\tT\t[7:74689123[T\t55\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;INSERTION=GCTGTAAAAATAATAAAAATAATAAACGGAGCTGCCTGGAGGCGGCCGCACTCG;MAPQ=60;MATEID=405771:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_74676001_74701001_30C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:21:50:55.4:55.4,0,68.6:19:2:-55.27:55.37\n9\t98546766\t507067:1\tA\tA[9:98549383[\t99\tPASS\tEVDNC=ASSMB;HOMSEQ=TCTCA;MAPQ=60;MATEID=507067:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_98539001_98564001_7C;SPAN=2617;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:41:46:9.3:132,9.3,0:41:0:-131.9:131.9\n9\t98549383\t507067:2\tT\t]9:98546766]T\t99\tPASS\tEVDNC=ASSMB;HOMSEQ=TCTCA;MAPQ=60;MATEID=507067:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_98539001_98564001_7C;SPAN=2617;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:41:46:9.3:132,9.3,0:41:0:-131.9:131.9\n9\t98577128\t507084:1\tA\t]9:98577228]A\t25\tPASS\tEVDNC=ASSMB;HOMSEQ=ATGGATGGATGGATGGATGGATGGA;MAPQ=60;MATEID=507084:2;MATENM=0;NM=4;NUMPARTS=2;SCTG=c_9_98563501_98588501_62C;SPAN=100;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:15:87:25.1:25.1,0,193.4:15:0:-25.06:32.65\n9\t98577228\t507084:2\tA\tA[9:98577128[\t25\tPASS\tEVDNC=ASSMB;HOMSEQ=ATGGATGGATGGATGGATGGATGGA;MAPQ=60;MATEID=507084:1;MATENM=4;NM=0;NUMPARTS=2;SCTG=c_9_98563501_98588501_62C;SPAN=100;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:15:87:25.1:25.1,0,193.4:15:0:-25.06:32.65\n9\t98585704\t507086:1\tT\tT[9:98586035[\t29\tPASS\tEVDNC=ASSMB;HOMSEQ=T;MAPQ=60;MATEID=507086:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_98563501_98588501_72C;SPAN=331;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:38:29:29,0,65.3:12:0:-28.93:29.75\n9\t98586035\t507086:2\tT\t]9:98585704]T\t29\tPASS\tEVDNC=ASSMB;HOMSEQ=T;MAPQ=60;MATEID=507086:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_98563501_98588501_72C;SPAN=331;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:38:29:29,0,65.3:12:0:-28.93:29.75\n9\t98712914\t917272:1\tC\t]22:32179921]C\t46\tPASS\tDISC_MAPQ=42;EVDNC=DSCRD;IMPRECISE;MAPQ=57;MATEID=917272:2;MATENM=1;NM=7;NUMPARTS=3;SCTG=c_22_32168501_32193501_13C;SECONDARY;SPAN=-1;SUBN=1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:16:10:4.2:46.2,4.2,0:11:9:-46.21:46.21\n9\t98715302\t917274:1\tT\tT[22:32179925[\t62\tPASS\tDISC_MAPQ=30;EVDNC=ASDIS;INSERTION=GCATGGTGAGTCT;MAPQ=60;MATEID=917274:2;MATENM=2;NM=35;NUMPARTS=2;SCTG=c_22_32168501_32193501_27C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:21:10:5.7:62.7,5.7,0:19:7:-62.72:62.72\n9\t101419834\t507872:1\tC\t]9:101420140]C\t9\tPASS\tEVDNC=ASSMB;HOMSEQ=CA;MAPQ=60;MATEID=507872:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_9_101405501_101430501_15C;SPAN=306;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:59:9.8:9.8,0,138.5:8:0:-9.824:16.5\n9\t101420140\t507872:2\tA\tA[9:101419834[\t9\tPASS\tEVDNC=ASSMB;HOMSEQ=CA;MAPQ=60;MATEID=507872:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_9_101405501_101430501_15C;SPAN=306;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:59:9.8:9.8,0,138.5:8:0:-9.824:16.5\n9\t101681697\t508021:1\tT\tT[9:101682446[\t99\tPASS\tEVDNC=ASSMB;HOMSEQ=GAATATATCCCTATTCTT;MAPQ=60;MATEID=508021:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_101675001_101700001_19C;SPAN=749;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:41:22:11.4:125.4,11.4,0:41:0:-125.4:125.4\n9\t101682446\t508021:2\tG\t]9:101681697]G\t99\tPASS\tEVDNC=ASSMB;HOMSEQ=GAATATATCCCTATTCTT;MAPQ=60;MATEID=508021:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_101675001_101700001_19C;SPAN=749;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:41:22:11.4:125.4,11.4,0:41:0:-125.4:125.4\n9\t101898793\t508069:1\tA\tA[9:101905675[\t79\tPASS\tEVDNC=ASSMB;HOMSEQ=GA;MAPQ=60;MATEID=508069:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_101895501_101920501_47C;SPAN=6882;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:26:31:1.8:79.2,1.8,0:26:0:-81.69:81.69\n9\t101905675\t508069:2\tG\t]9:101898793]G\t79\tPASS\tEVDNC=ASSMB;HOMSEQ=GA;MAPQ=60;MATEID=508069:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_101895501_101920501_47C;SPAN=6882;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:26:31:1.8:79.2,1.8,0:26:0:-81.69:81.69\n9\t102716959\t508265:1\tT\t]9:102730923]T\t36\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TTG;MAPQ=60;MATEID=508265:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_102728501_102753501_236C;SPAN=13964;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:24:23:36.2,0,23:9:9:-36.29:36.29\n9\t102730923\t508265:2\tG\tG[9:102716959[\t36\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TTG;MAPQ=60;MATEID=508265:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_102728501_102753501_236C;SPAN=13964;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:24:23:36.2,0,23:9:9:-36.29:36.29\n9\t103806086\t508606:1\tT\tT[9:103807448[\t26\tPASS\tDISC_MAPQ=53;EVDNC=DSCRD;IMPRECISE;MAPQ=53;MATEID=508606:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=9:103806086(+)-9:103807448(-)__9_103782001_103807001D;SPAN=1362;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:9:4:2.4:26.4,2.4,0:0:9:-26.41:26.41\n9\t103807448\t508606:2\tA\t]9:103806086]A\t26\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=508606:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=9:103806086(+)-9:103807448(-)__9_103782001_103807001D;SPAN=1362;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:9:4:2.4:26.4,2.4,0:0:9:-26.41:26.41\n9\t104334655\t508742:1\tG\tG[9:104335428[\t17\tPASS\tEVDNC=ASSMB;INSERTION=AATTTATTATCTA;MAPQ=60;MATEID=508742:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_104321001_104346001_28C;SPAN=773;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:44:17.3:17.3,0,93.2:9:0:-17.34:20.33\n9\t104335428\t508742:2\tT\t]9:104334655]T\t17\tPASS\tEVDNC=ASSMB;INSERTION=AATTTATTATCTA;MAPQ=60;MATEID=508742:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_104321001_104346001_28C;SPAN=773;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:44:17.3:17.3,0,93.2:9:0:-17.34:20.33\n9\t104600936\t508836:1\tT\t]9:104607160]T\t46\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TCTAATTTCTTGAAATAAGAAGAAAAATTCTTATTTCCTCCT;MAPQ=60;MATEID=508836:2;MATENM=0;NM=4;NUMPARTS=2;SCTG=c_9_104590501_104615501_30C;SPAN=6224;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:17:34:36.8:46.7,0,36.8:13:5:-46.59:46.59\n9\t104607160\t508836:2\tT\tT[9:104600936[\t46\tPASS\tDISC_MAPQ=46;EVDNC=ASDIS;HOMSEQ=TCTAATTTCTTGAAATAAGAAGAAAAATTCTTATTTCCTCCT;MAPQ=60;MATEID=508836:1;MATENM=4;NM=0;NUMPARTS=2;SCTG=c_9_104590501_104615501_30C;SPAN=6224;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:17:34:36.8:46.7,0,36.8:13:5:-46.59:46.59\n9\t104638707\t508859:1\tT\tT[9:104639007[\t45\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AAAAAAATCCTCCTT;MAPQ=60;MATEID=508859:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_9_104615001_104640001_147C;SPAN=300;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:16:25:16.1:45.8,0,16.1:12:6:-46.5:46.5\n9\t104639007\t508859:2\tA\t]9:104638707]A\t45\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AAAAAAATCCTCCTT;MAPQ=60;MATEID=508859:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_9_104615001_104640001_147C;SPAN=300;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:16:25:16.1:45.8,0,16.1:12:6:-46.5:46.5\n9\t104854285\t508919:2\tT\t[1:109194083[T\t44\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;INSERTION=AATGTCTCCAGGACATTTTTGTATA;MAPQ=60;MATEID=508919:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_104835501_104860501_16C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:15:20:4.4:44,0,4.4:12:10:-45.49:45.49\n9\t105054371\t509026:1\tT\t[9:105055067[T\t99\tPASS\tDISC_MAPQ=59;EVDNC=ASDIS;INSERTION=ACATACATAACTAGA;MAPQ=60;MATEID=509026:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_9_105031501_105056501_7C;SPAN=696;SUBN=1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:47:62:15.8:137.9,0,15.8:31:30:-143:143\n9\t105055067\t509026:2\tC\t[9:105054371[C\t99\tPASS\tDISC_MAPQ=57;EVDNC=ASDIS;INSERTION=ACATACATAACTAGA;MAPQ=60;MATEID=509026:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_9_105031501_105056501_7C;SPAN=696;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:47:62:15.8:137.9,0,15.8:31:30:-143:143\n9\t106261848\t509449:1\tT\tT[9:106262147[\t75\tPASS\tEVDNC=ASSMB;HOMSEQ=AAGAATAAACCTT;MAPQ=60;MATEID=509449:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_106256501_106281501_16C;SPAN=299;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:25:25:6.9:75.9,6.9,0:25:0:-75.92:75.92\n9\t106262147\t509449:2\tA\t]9:106261848]A\t75\tPASS\tEVDNC=ASSMB;HOMSEQ=AAGAATAAACCTT;MAPQ=60;MATEID=509449:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_106256501_106281501_16C;SPAN=299;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:25:25:6.9:75.9,6.9,0:25:0:-75.92:75.92\n9\t106788574\t509629:2\tC\tC[4:170678003[\t20\tPASS\tDISC_MAPQ=27;EVDNC=DSCRD;IMPRECISE;MAPQ=27;MATEID=509629:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=4:170678003(-)-9:106788574(+)__9_106771001_106796001D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:22:20.3:20.3,0,33.5:0:8:-20.22:20.45\n9\t107177389\t509734:2\tT\tT]9:89854059]\t27\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;INSERTION=A;MAPQ=60;MATEID=509734:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_107163001_107188001_56C;SPAN=17323330;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:20:20.9:27.5,0,20.9:9:4:-27.41:27.41\n9\t107182828\t760282:1\tA\tA[16:31371775[\t24\tPASS\tEVDNC=ASSMB;INSERTION=TATATACATTAAACAA;MAPQ=60;MATEID=760282:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_16_31360001_31385001_63C;SPAN=-1;SUBN=1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:19:21.2:24.5,0,21.2:9:0:-24.37:24.37\n9\t107256005\t509779:1\tT\tT[9:107258568[\t99\tPASS\tEVDNC=ASSMB;HOMSEQ=ATAAATCTT;MAPQ=60;MATEID=509779:2;MATENM=0;NM=3;NUMPARTS=2;SCTG=c_9_107236501_107261501_40C;SPAN=2563;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:46:67:34.1:133.1,0,34.1:46:0:-136.1:136.1\n9\t107258568\t509779:2\tA\t]9:107256005]A\t99\tPASS\tEVDNC=ASSMB;HOMSEQ=ATAAATCTT;MAPQ=60;MATEID=509779:1;MATENM=3;NM=0;NUMPARTS=2;SCTG=c_9_107236501_107261501_40C;SPAN=2563;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:46:67:34.1:133.1,0,34.1:46:0:-136.1:136.1\n9\t107271163\t509785:1\tT\tT[9:107273174[\t99\tPASS\tEVDNC=ASSMB;INSERTION=A;MAPQ=60;MATEID=509785:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_107261001_107286001_70C;SPAN=2011;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:32:33:9:99,9,0:32:0:-99.02:99.02\n9\t107273174\t509785:2\tA\t]9:107271163]A\t99\tPASS\tEVDNC=ASSMB;INSERTION=A;MAPQ=60;MATEID=509785:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_107261001_107286001_70C;SPAN=2011;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:32:33:9:99,9,0:32:0:-99.02:99.02\n9\t107775254\t509965:1\tA\tA[9:107778315[\t89\tPASS\tEVDNC=ASSMB;HOMSEQ=TAAAAATATTTTGTA;MAPQ=60;MATEID=509965:2;MATENM=1;NM=3;NUMPARTS=2;SCTG=c_9_107775501_107800501_26C;SPAN=3061;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:29:9:8.1:89.1,8.1,0:29:0:-89.12:89.12\n9\t107778315\t509965:2\tT\t]9:107775254]T\t89\tPASS\tEVDNC=ASSMB;HOMSEQ=TAAAAATATTTTGTA;MAPQ=60;MATEID=509965:1;MATENM=3;NM=1;NUMPARTS=2;SCTG=c_9_107775501_107800501_26C;SPAN=3061;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:29:9:8.1:89.1,8.1,0:29:0:-89.12:89.12\n9\t108352880\t427922:2\tT\t[7:134739891[T\t26\tPASS\tDISC_MAPQ=0;EVDNC=ASDIS;HOMSEQ=TAAAATTATG;MAPQ=60;MATEID=427922:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_134725501_134750501_66C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:9:8:2.4:26.4,2.4,0:8:2:-26.41:26.41\n9\t109410883\t510495:2\tG\t]8:103833107]G\t32\tPASS\tEVDNC=ASSMB;INSERTION=GCATTTTTT;MAPQ=60;MATEID=510495:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_109392501_109417501_62C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:25:29.3:32.6,0,29.3:12:0:-32.59:32.59\n9\t109523566\t510532:1\tA\t]9:109524282]A\t91\tPASS\tEVDNC=ASSMB;INSERTION=TGA;MAPQ=60;MATEID=510532:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_9_109515001_109540001_9C;SPAN=716;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:31:38:2.6:91.7,0,2.6:31:0:-96.48:96.48\n9\t109524282\t510532:2\tC\tC[9:109523566[\t91\tPASS\tEVDNC=ASSMB;INSERTION=TGA;MAPQ=60;MATEID=510532:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_9_109515001_109540001_9C;SPAN=716;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:31:38:2.6:91.7,0,2.6:31:0:-96.48:96.48\n9\t111642641\t511441:2\tA\tA[2:130210907[\t42\tPASS\tDISC_MAPQ=30;EVDNC=ASDIS;HOMSEQ=A;MAPQ=60;MATEID=511441:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_111622001_111647001_71C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:15:24:16.4:42.8,0,16.4:15:2:-43.34:43.34\n9\t112100475\t321578:2\tC\tC]5:179299294]\t42\tPASS\tDISC_MAPQ=10;EVDNC=ASDIS;HOMSEQ=GGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGC;MAPQ=31;MATEID=321578:1;MATENM=9;NM=4;NUMPARTS=2;SCTG=c_5_179291001_179316001_13C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:14:7:3.9:42.9,3.9,0:12:2:-42.91:42.91\n9\t112140079\t511668:1\tG\tG[9:112140378[\t29\tPASS\tEVDNC=ASSMB;HOMSEQ=AAAAAATACAAAAATTG;MAPQ=60;MATEID=511668:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_9_112136501_112161501_10C;SPAN=299;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:23:26.6:29.9,0,26.6:11:0:-29.85:29.85\n9\t112140378\t511668:2\tA\t]9:112140079]A\t29\tPASS\tEVDNC=ASSMB;HOMSEQ=AAAAAATACAAAAATTG;MAPQ=60;MATEID=511668:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_9_112136501_112161501_10C;SPAN=299;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:23:26.6:29.9,0,26.6:11:0:-29.85:29.85\n9\t113174817\t512193:1\tA\tA[9:113175100[\t99\tPASS\tEVDNC=ASSMB;HOMSEQ=AAGAGCTAGGGAA;MAPQ=60;MATEID=512193:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_9_113165501_113190501_64C;SPAN=283;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:35:27:9.6:105.6,9.6,0:35:0:-105.6:105.6\n9\t113175100\t512193:2\tA\t]9:113174817]A\t99\tPASS\tEVDNC=ASSMB;HOMSEQ=AAGAGCTAGGGAA;MAPQ=60;MATEID=512193:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_9_113165501_113190501_64C;SPAN=283;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:35:27:9.6:105.6,9.6,0:35:0:-105.6:105.6\n9\t115473327\t513034:1\tG\tG[9:115478586[\t58\tPASS\tDISC_MAPQ=58;EVDNC=DSCRD;IMPRECISE;MAPQ=58;MATEID=513034:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=9:115473327(+)-9:115478586(-)__9_115468501_115493501D;SPAN=5259;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:21:40:41.6:58.1,0,41.6:0:21:-58.2:58.2\n9\t115478586\t513034:2\tC\t]9:115473327]C\t58\tPASS\tDISC_MAPQ=23;EVDNC=DSCRD;IMPRECISE;MAPQ=23;MATEID=513034:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=9:115473327(+)-9:115478586(-)__9_115468501_115493501D;SPAN=5259;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:21:40:41.6:58.1,0,41.6:0:21:-58.2:58.2\n9\t116620017\t513469:1\tA\tA[9:116895019[\t29\tPASS\tEVDNC=ASSMB;HOMSEQ=AA;MAPQ=60;MATEID=513469:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_116889501_116914501_6C;SPAN=275002;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:14:5.9:29,0,5.9:10:0:-29.91:29.91\n9\t116714798\t513418:1\tG\tG[9:116715119[\t52\tPASS\tEVDNC=ASSMB;HOMSEQ=AAGAATCATGTGAG;MAPQ=60;MATEID=513418:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_116693501_116718501_2C;SPAN=321;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:18:16:4.8:52.8,4.8,0:18:0:-52.81:52.81\n9\t116715119\t513418:2\tA\t]9:116714798]A\t52\tPASS\tEVDNC=ASSMB;HOMSEQ=AAGAATCATGTGAG;MAPQ=60;MATEID=513418:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_116693501_116718501_2C;SPAN=321;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:18:16:4.8:52.8,4.8,0:18:0:-52.81:52.81\n9\t116756723\t513444:1\tC\tC[9:116882005[\t69\tPASS\tEVDNC=ASSMB;INSERTION=A;MAPQ=60;MATEID=513444:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_9_116742501_116767501_27C;SPAN=125282;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:23:8:6.3:69.3,6.3,0:23:0:-69.32:69.32\n9\t116773796\t513457:1\tA\tA[9:116820072[\t39\tPASS\tEVDNC=ASSMB;HOMSEQ=A;MAPQ=60;MATEID=513457:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_9_116816001_116841001_30C;SPAN=46276;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:13:3:3.6:39.6,3.6,0:13:0:-39.61:39.61\n9\t116820072\t513457:2\tA\t]9:116773796]A\t39\tPASS\tEVDNC=ASSMB;HOMSEQ=A;MAPQ=60;MATEID=513457:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_9_116816001_116841001_30C;SPAN=46276;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:13:3:3.6:39.6,3.6,0:13:0:-39.61:39.61\n9\t116882005\t513444:2\tC\t]9:116756723]C\t69\tPASS\tEVDNC=ASSMB;INSERTION=A;MAPQ=60;MATEID=513444:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_9_116742501_116767501_27C;SPAN=125282;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:23:8:6.3:69.3,6.3,0:23:0:-69.32:69.32\n9\t116895019\t513469:2\tA\t]9:116620017]A\t29\tPASS\tEVDNC=ASSMB;HOMSEQ=AA;MAPQ=60;MATEID=513469:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_116889501_116914501_6C;SPAN=275002;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:14:5.9:29,0,5.9:10:0:-29.91:29.91\n9\t117057123\t513582:1\tG\t]9:117100182]G\t41\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=513582:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_117085501_117110501_29C;SPAN=43059;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:18:1.7:41.3,0,1.7:14:0:-42.92:42.92\n9\t117100182\t513582:2\tG\tG[9:117057123[\t41\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=513582:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_117085501_117110501_29C;SPAN=43059;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:18:1.7:41.3,0,1.7:14:0:-42.92:42.92\n9\t117377297\t723297:1\tT\t[15:29700693[T\t39\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=723297:2;MATENM=0;NM=0;NUMPARTS=3;SCTG=c_15_29694001_29719001_68C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:13:13:3.6:39.6,3.6,0:6:8:-39.61:39.61\n9\t118242011\t513972:1\tC\t]9:118247603]C\t17\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=513972:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=9:118242011(-)-9:118247603(+)__9_118237001_118262001D;SPAN=5592;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:46:17:17,0,96.2:0:9:-16.78:20.14\n9\t118247603\t513972:2\tA\tA[9:118242011[\t17\tPASS\tDISC_MAPQ=56;EVDNC=DSCRD;IMPRECISE;MAPQ=56;MATEID=513972:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=9:118242011(-)-9:118247603(+)__9_118237001_118262001D;SPAN=5592;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:46:17:17,0,96.2:0:9:-16.78:20.14\n9\t119030599\t514253:1\tT\tT[9:119031168[\t13\tPASS\tEVDNC=ASSMB;HOMSEQ=T;MAPQ=60;MATEID=514253:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_119021001_119046001_3C;SPAN=569;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:7:34:13.7:13.7,0,69.8:7:0:-13.55:15.84\n9\t119031168\t514253:2\tT\t]9:119030599]T\t13\tPASS\tEVDNC=ASSMB;HOMSEQ=T;MAPQ=60;MATEID=514253:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_119021001_119046001_3C;SPAN=569;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:7:34:13.7:13.7,0,69.8:7:0:-13.55:15.84\n9\t119769567\t514485:1\tC\tC[9:119769875[\t72\tPASS\tEVDNC=ASSMB;HOMSEQ=AAGAAAATTGC;MAPQ=60;MATEID=514485:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_119756001_119781001_19C;SPAN=308;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:23:24:6.6:72.6,6.6,0:23:0:-72.62:72.62\n9\t119769875\t514485:2\tA\t]9:119769567]A\t72\tPASS\tEVDNC=ASSMB;HOMSEQ=AAGAAAATTGC;MAPQ=60;MATEID=514485:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_119756001_119781001_19C;SPAN=308;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:23:24:6.6:72.6,6.6,0:23:0:-72.62:72.62\n9\t119887340\t748564:1\tT\t]16:909933]T\t32\tPASS\tEVDNC=ASSMB;HOMSEQ=TG;MAPQ=60;MATEID=748564:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_16_906501_931501_32C;SPAN=-1;SUBN=3;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:25:29.3:32.6,0,29.3:12:0:-32.59:32.59\n9\t120805084\t514776:2\tA\t[4:169821466[A\t21\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;MAPQ=60;MATEID=514776:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_120785001_120810001_13C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:29:21.5:21.5,0,51.2:6:3:-21.56:22.23\n9\t120805215\t266207:2\tG\tG]4:169866444]\t25\tPASS\tDISC_MAPQ=48;EVDNC=ASDIS;HOMSEQ=CA;MAPQ=60;MATEID=266207:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_169858501_169883501_16C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:16:12.2:25.4,0,12.2:4:6:-25.35:25.35\n9\t120965446\t514833:1\tG\tG[9:120965847[\t18\tPASS\tEVDNC=ASSMB;HOMSEQ=CTGG;MAPQ=60;MATEID=514833:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_120956501_120981501_77C;SPAN=401;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:41:18.2:18.2,0,84.2:9:0:-18.18:20.65\n9\t120965847\t514833:2\tC\t]9:120965446]C\t18\tPASS\tEVDNC=ASSMB;HOMSEQ=CTGG;MAPQ=60;MATEID=514833:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_120956501_120981501_77C;SPAN=401;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:41:18.2:18.2,0,84.2:9:0:-18.18:20.65\n9\t121464631\t514986:1\tA\t]9:121465541]A\t49\tPASS\tEVDNC=ASSMB;INSERTION=AAACA;MAPQ=60;MATEID=514986:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_9_121446501_121471501_60C;SPAN=910;SUBN=5;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:19:47:49.7:49.7,0,66.2:19:0:-49.51:49.68\n9\t121465541\t514986:2\tA\tA[9:121464631[\t49\tPASS\tEVDNC=ASSMB;INSERTION=AAACA;MAPQ=60;MATEID=514986:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_9_121446501_121471501_60C;SPAN=910;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:19:47:49.7:49.7,0,66.2:19:0:-49.51:49.68\n9\t122576590\t864265:1\tG\t]20:15095882]G\t29\tPASS\tEVDNC=ASSMB;INSERTION=T;MAPQ=60;MATEID=864265:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_15092001_15117001_11C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:10:7:2.7:29.7,2.7,0:10:0:-29.71:29.71\n9\t122577102\t864334:1\tA\tA[20:15405783[\t39\tPASS\tEVDNC=ASSMB;HOMSEQ=AA;MAPQ=60;MATEID=864334:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_15386001_15411001_1C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:13:12:3.6:39.6,3.6,0:13:0:-39.61:39.61\n9\t123223155\t515633:1\tC\t]9:123448482]C\t41\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=CAG;MAPQ=60;MATEID=515633:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_123431001_123456001_31C;SPAN=225327;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:15:29:31.4:41.3,0,31.4:10:10:-41.43:41.43\n9\t123383698\t515665:1\tG\t]9:123559605]G\t24\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=515665:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=9:123383698(-)-9:123559605(+)__9_123553501_123578501D;SPAN=175907;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:31:24.5:24.5,0,50.9:0:10:-24.3:24.91\n9\t123448482\t515633:2\tG\tG[9:123223155[\t41\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=CAG;MAPQ=60;MATEID=515633:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_123431001_123456001_31C;SPAN=225327;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:15:29:31.4:41.3,0,31.4:10:10:-41.43:41.43\n9\t123559605\t515665:2\tT\tT[9:123383698[\t24\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=515665:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=9:123383698(-)-9:123559605(+)__9_123553501_123578501D;SPAN=175907;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:31:24.5:24.5,0,50.9:0:10:-24.3:24.91\n9\t124441172\t516013:1\tC\t]9:124656822]C\t22\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;MAPQ=60;MATEID=516013:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_124656001_124681001_23C;SPAN=215650;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:15:15.5:22.1,0,15.5:4:7:-22.25:22.25\n9\t124656822\t516013:2\tA\tA[9:124441172[\t22\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;MAPQ=60;MATEID=516013:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_124656001_124681001_23C;SPAN=215650;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:15:15.5:22.1,0,15.5:4:7:-22.25:22.25\n9\t125123053\t836323:1\tC\t[18:74044264[C\t46\tPASS\tDISC_MAPQ=41;EVDNC=ASDIS;INSERTION=AGATA;MAPQ=60;MATEID=836323:2;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_18_74039001_74064001_4C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:15:7:4.2:46.2,4.2,0:12:4:-46.21:46.21\n9\t125123230\t836324:1\tG\tG]18:74044279]\t56\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;MAPQ=60;MATEID=836324:2;MATENM=9;NM=0;NUMPARTS=2;SCTG=c_18_74039001_74064001_2C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:19:7:5.1:56.1,5.1,0:15:6:-56.11:56.11\n9\t125174450\t516187:2\tT\t]9:88370788]T\t53\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=516187:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_125170501_125195501_111C;SPAN=36803662;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:18:23:3.5:53,0,3.5:18:0:-55.29:55.29\n9\t125174450\t516185:2\tT\tT[9:88370208[\t36\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=516185:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_125170501_125195501_40C;SPAN=36804242;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:23:20:36.5,0,20:13:0:-36.66:36.66\n9\t128138847\t517175:1\tC\tC[9:128139780[\t85\tPASS\tDISC_MAPQ=45;EVDNC=ASDIS;HOMSEQ=GGTAAGAGGGGCTGGCTCTCAGTCCC;MAPQ=60;MATEID=517175:2;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_9_128135001_128160001_33C;SPAN=933;SUBN=1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:28:27:7.8:85.8,7.8,0:15:15:-85.82:85.82\n9\t128139780\t517175:2\tG\t]9:128138847]G\t85\tPASS\tDISC_MAPQ=49;EVDNC=ASDIS;HOMSEQ=GGTAAGAGGGGCTGGCTCTCAGTCCC;MAPQ=60;MATEID=517175:1;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_9_128135001_128160001_33C;SPAN=933;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:28:27:7.8:85.8,7.8,0:15:15:-85.82:85.82\n9\t128649826\t517321:1\tC\tC[9:128651644[\t29\tPASS\tDISC_MAPQ=52;EVDNC=DSCRD;IMPRECISE;MAPQ=52;MATEID=517321:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=9:128649826(+)-9:128651644(-)__9_128649501_128674501D;SPAN=1818;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:10:5:2.7:29.7,2.7,0:0:10:-29.71:29.71\n9\t128651644\t517321:2\tG\t]9:128649826]G\t29\tPASS\tDISC_MAPQ=48;EVDNC=DSCRD;IMPRECISE;MAPQ=48;MATEID=517321:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=9:128649826(+)-9:128651644(-)__9_128649501_128674501D;SPAN=1818;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:10:5:2.7:29.7,2.7,0:0:10:-29.71:29.71\n9\t128694869\t517334:2\tT\tT[2:115619092[\t27\tPASS\tEVDNC=ASSMB;HOMSEQ=GTCTCT;MAPQ=60;MATEID=517334:1;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_9_128674001_128699001_56C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:32:27.5:27.5,0,50.6:11:0:-27.32:27.77\n9\t128696493\t517337:2\tA\tA]2:115619217]\t48\tPASS\tDISC_MAPQ=43;EVDNC=DSCRD;IMPRECISE;MAPQ=43;MATEID=517337:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=2:115619217(+)-9:128696493(+)__9_128674001_128699001D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:17:28:21.8:48.2,0,21.8:0:17:-48.77:48.77\n9\t128801967\t517379:1\tT\tT[9:128802259[\t33\tPASS\tEVDNC=ASSMB;HOMSEQ=TGTT;MAPQ=60;MATEID=517379:2;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_9_128796501_128821501_18C;SPAN=292;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:22:20.3:33.5,0,20.3:12:0:-33.55:33.55\n9\t128802259\t517379:2\tT\t]9:128801967]T\t33\tPASS\tEVDNC=ASSMB;HOMSEQ=TGTT;MAPQ=60;MATEID=517379:1;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_9_128796501_128821501_18C;SPAN=292;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:22:20.3:33.5,0,20.3:12:0:-33.55:33.55\n9\t128938673\t517440:1\tT\tT[9:128939830[\t99\tPASS\tDISC_MAPQ=51;EVDNC=ASDIS;HOMSEQ=TTTTTAGTAGAGACGGGGTTCCACCATGTTGGCCAGGCTGGTCTCGAACTCCTGACCTCAGGTGATCCACCCGCCT;MAPQ=60;MATEID=517440:2;MATENM=7;NM=4;NUMPARTS=2;SCTG=c_9_128919001_128944001_27C;SPAN=1157;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:45:6:12.6:138.6,12.6,0:10:38:-138.6:138.6\n9\t128939830\t517440:2\tT\t]9:128938673]T\t99\tPASS\tDISC_MAPQ=59;EVDNC=ASDIS;HOMSEQ=TTTTTAGTAGAGACGGGGTTCCACCATGTTGGCCAGGCTGGTCTCGAACTCCTGACCTCAGGTGATCCACCCGCCT;MAPQ=60;MATEID=517440:1;MATENM=4;NM=7;NUMPARTS=2;SCTG=c_9_128919001_128944001_27C;SPAN=1157;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:45:6:12.6:138.6,12.6,0:10:38:-138.6:138.6\n9\t129264421\t517552:1\tT\tT[9:129265791[\t22\tPASS\tEVDNC=ASSMB;HOMSEQ=GCTGGGATTACAGGT;MAPQ=60;MATEID=517552:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_129262001_129287001_128C;SPAN=1370;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:16:15.5:22.1,0,15.5:8:0:-21.93:21.93\n9\t129265791\t517552:2\tG\t]9:129264421]G\t22\tPASS\tEVDNC=ASSMB;HOMSEQ=GCTGGGATTACAGGT;MAPQ=60;MATEID=517552:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_129262001_129287001_128C;SPAN=1370;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:16:15.5:22.1,0,15.5:8:0:-21.93:21.93\n9\t129396438\t517595:1\tG\t]9:129397012]G\t69\tPASS\tDISC_MAPQ=54;EVDNC=DSCRD;IMPRECISE;MAPQ=54;MATEID=517595:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=9:129396438(-)-9:129397012(+)__9_129384501_129409501D;SPAN=574;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:25:47:46.4:69.5,0,46.4:0:25:-69.5:69.5\n9\t129397012\t517595:2\tG\tG[9:129396438[\t69\tPASS\tDISC_MAPQ=46;EVDNC=DSCRD;IMPRECISE;MAPQ=46;MATEID=517595:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=9:129396438(-)-9:129397012(+)__9_129384501_129409501D;SPAN=574;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:25:47:46.4:69.5,0,46.4:0:25:-69.5:69.5\n9\t129410470\t517627:1\tA\tA[Un_JTFH01001474v1_decoy:1[\t7\tPASS\tDISC_MAPQ=255;EVDNC=TSI_L;HOMSEQ=TCAGCATCACCACCAACATCACAACCACCATCA;MAPQ=60;MATEID=517627:2;MATENM=0;NM=0;NUMPARTS=5;REPSEQ=CACCAC;SCTG=c_9_129409001_129434001_82C;SPAN=-1;SUBN=2;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:56:7.8:7.8,0,96.2:9:0:-7.677:13.03\n9\t129435079\t517695:1\tT\tT[9:129435408[\t50\tPASS\tDISC_MAPQ=0;EVDNC=TSI_L;HOMSEQ=GGTGTCCTGT;MAPQ=60;MATEID=517695:2;MATENM=0;NM=38;NUMPARTS=3;REPSEQ=TTTTT;SCTG=c_9_129433501_129458501_42C;SPAN=329;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:21:45:50.3:50.3,0,50.3:17:8:-50.35:50.35\n9\t129435408\t517695:2\tG\t]9:129435079]G\t50\tPASS\tDISC_MAPQ=0;EVDNC=TSI_L;HOMSEQ=GGTGTCCTGT;MAPQ=60;MATEID=517695:1;MATENM=38;NM=0;NUMPARTS=3;REPSEQ=TTTTT;SCTG=c_9_129433501_129458501_42C;SPAN=329;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:21:45:50.3:50.3,0,50.3:17:8:-50.35:50.35\n9\t129864461\t518089:1\tC\tC[9:130112446[\t46\tPASS\tEVDNC=ASSMB;HOMSEQ=C;MAPQ=60;MATEID=518089:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_9_130095001_130120001_5C;SPAN=247985;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:16:13:4.2:46.2,4.2,0:16:0:-46.21:46.21\n9\t130112446\t518089:2\tC\t]9:129864461]C\t46\tPASS\tEVDNC=ASSMB;HOMSEQ=C;MAPQ=60;MATEID=518089:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_9_130095001_130120001_5C;SPAN=247985;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:16:13:4.2:46.2,4.2,0:16:0:-46.21:46.21\n9\t130197644\t518152:1\tA\t]9:130221959]A\t39\tPASS\tDISC_MAPQ=49;EVDNC=ASDIS;INSERTION=T;MAPQ=60;MATEID=518152:2;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_9_130217501_130242501_98C;SPAN=24315;SUBN=1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:13:16:0.9:39.6,0.9,0:8:10:-40.41:40.41\n9\t130221959\t518152:2\tA\tA[9:130197644[\t39\tPASS\tDISC_MAPQ=40;EVDNC=ASDIS;INSERTION=T;MAPQ=0;MATEID=518152:1;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_9_130217501_130242501_98C;SPAN=24315;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:13:16:0.9:39.6,0.9,0:8:10:-40.41:40.41\n9\t130268363\t518192:1\tC\tC[9:130272523[\t51\tPASS\tEVDNC=ASSMB;INSERTION=A;MAPQ=60;MATEID=518192:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_130266501_130291501_32C;SPAN=4160;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:18:29:21.5:51.2,0,21.5:18:0:-51.92:51.92\n9\t130272523\t518192:2\tG\t]9:130268363]G\t51\tPASS\tEVDNC=ASSMB;INSERTION=A;MAPQ=60;MATEID=518192:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_130266501_130291501_32C;SPAN=4160;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:18:29:21.5:51.2,0,21.5:18:0:-51.92:51.92\n9\t130392964\t518254:2\tC\tC]3:11599603]\t49\tPASS\tDISC_MAPQ=4;EVDNC=ASDIS;HOMSEQ=GAGTGCAGTGGCGCGATCTCGGCTCACTGCAAGCTC;MAPQ=19;MATEID=518254:1;MATENM=2;NM=4;NUMPARTS=2;SCTG=c_9_130389001_130414001_29C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:17:12:4.5:49.5,4.5,0:9:12:-49.51:49.51\n9\t131371843\t518653:1\tT\t]9:131372761]T\t0\tPASS\tEVDNC=ASSMB;HOMSEQ=TCGCCC;MAPQ=60;MATEID=518653:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_131369001_131394001_55C;SPAN=918;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:4:46:0.5:0.5,0,112.7:4:0:-0.2738:7.434\n9\t131372761\t518653:2\tC\tC[9:131371843[\t0\tPASS\tEVDNC=ASSMB;HOMSEQ=TCGCCC;MAPQ=60;MATEID=518653:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_131369001_131394001_55C;SPAN=918;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:4:46:0.5:0.5,0,112.7:4:0:-0.2738:7.434\n9\t132787337\t519162:1\tA\t]9:132845611]A\t34\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=519162:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_132839001_132864001_5C;SPAN=58274;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:20:14.3:34.1,0,14.3:12:0:-34.32:34.32\n9\t132845611\t519162:2\tT\tT[9:132787337[\t34\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=519162:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_132839001_132864001_5C;SPAN=58274;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:20:14.3:34.1,0,14.3:12:0:-34.32:34.32\n9\t133548994\t519435:1\tT\tT[9:133549304[\t59\tPASS\tEVDNC=ASSMB;HOMSEQ=CACAGTTTCCTTCTT;MAPQ=60;MATEID=519435:2;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_9_133525001_133550001_22C;SPAN=310;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:20:15:5.4:59.4,5.4,0:20:0:-59.41:59.41\n9\t133549304\t519435:2\tC\t]9:133548994]C\t59\tPASS\tEVDNC=ASSMB;HOMSEQ=CACAGTTTCCTTCTT;MAPQ=60;MATEID=519435:1;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_9_133525001_133550001_22C;SPAN=310;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:20:15:5.4:59.4,5.4,0:20:0:-59.41:59.41\n9\t134394166\t999384:1\tG\tG]Un_JTFH01000871v1_decoy:1074]\t62\tPASS\tDISC_MAPQ=255;EVDNC=TSI_G;HOMSEQ=CACCACCATCACCAACATCATCA;MAPQ=60;MATEID=999384:2;MATENM=0;NM=1;NUMPARTS=3;SCTG=c_1714_1_1074_7C;SPAN=-1;SUBN=3;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:21:7:5.7:62.7,5.7,0:21:0:-62.72:62.72\n9\t134684963\t519904:1\tC\t]9:134685497]C\t46\tPASS\tDISC_MAPQ=34;EVDNC=DSCRD;IMPRECISE;MAPQ=34;MATEID=519904:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=9:134684963(-)-9:134685497(+)__9_134676501_134701501D;SPAN=534;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:18:48:46.1:46.1,0,72.5:0:18:-45.93:46.31\n9\t134685497\t519904:2\tC\tC[9:134684963[\t46\tPASS\tDISC_MAPQ=48;EVDNC=DSCRD;IMPRECISE;MAPQ=48;MATEID=519904:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=9:134684963(-)-9:134685497(+)__9_134676501_134701501D;SPAN=534;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:18:48:46.1:46.1,0,72.5:0:18:-45.93:46.31\n9\t135119029\t520085:1\tC\t]9:135119480]C\t26\tPASS\tDISC_MAPQ=52;EVDNC=ASDIS;HOMSEQ=CTCACTGGATCTTTGGAAGTGCTCACTGGGTCTTTGGAAGTGCTCAC;MAPQ=60;MATEID=520085:2;MATENM=7;NM=1;NUMPARTS=2;SCTG=c_9_135117501_135142501_33C;SPAN=451;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:61:26:26,0,125:7:6:-25.77:29.63\n9\t135119480\t520085:2\tC\tC[9:135119029[\t26\tPASS\tDISC_MAPQ=58;EVDNC=ASDIS;HOMSEQ=CTCACTGGATCTTTGGAAGTGCTCACTGGGTCTTTGGAAGTGCTCAC;MAPQ=60;MATEID=520085:1;MATENM=1;NM=7;NUMPARTS=2;SCTG=c_9_135117501_135142501_33C;SPAN=451;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:61:26:26,0,125:7:6:-25.77:29.63\n9\t135322220\t520184:1\tA\tA[9:135325758[\t62\tPASS\tEVDNC=ASSMB;HOMSEQ=TGA;MAPQ=60;MATEID=520184:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_135313501_135338501_125C;SPAN=3538;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:22:36:26.3:62.6,0,26.3:22:0:-63.21:63.21\n9\t135325758\t520184:2\tT\t]9:135322220]T\t62\tPASS\tEVDNC=ASSMB;HOMSEQ=TGA;MAPQ=60;MATEID=520184:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_135313501_135338501_125C;SPAN=3538;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:22:36:26.3:62.6,0,26.3:22:0:-63.21:63.21\n9\t135350173\t520212:1\tC\t]Un_KN707757v1_decoy:3034]C\t17\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=520212:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_135338001_135363001_35C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:7:19:17.9:17.9,0,27.8:7:0:-17.77:17.94\n9\t135350252\t988641:1\tT\tT[Un_KN707757v1_decoy:1[\t46\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=988641:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_608_1_3034_6C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:16:4:4.2:46.2,4.2,0:16:0:-46.21:46.21\n9\t135350252\t520213:1\tT\tT[Un_KN707757v1_decoy:1[\t46\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=520213:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_135338001_135363001_41C;SPAN=-1;SUBN=1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:16:16:4.2:46.2,4.2,0:16:0:-46.21:46.21\n9\t135587257\t520316:1\tC\tC[9:135588354[\t99\tPASS\tEVDNC=ASSMB;HOMSEQ=GGC;MAPQ=60;MATEID=520316:2;MATENM=1;NM=5;NUMPARTS=2;SCTG=c_9_135583001_135608001_28C;SPAN=1097;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:36:18:9.9:108.9,9.9,0:36:0:-108.9:108.9\n9\t135588354\t520316:2\tG\t]9:135587257]G\t99\tPASS\tEVDNC=ASSMB;HOMSEQ=GGC;MAPQ=60;MATEID=520316:1;MATENM=5;NM=1;NUMPARTS=2;SCTG=c_9_135583001_135608001_28C;SPAN=1097;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:36:18:9.9:108.9,9.9,0:36:0:-108.9:108.9\n9\t136772879\t520714:1\tA\tA[9:136782783[\t38\tPASS\tEVDNC=ASSMB;HOMSEQ=AA;MAPQ=60;MATEID=520714:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_9_136759001_136784001_89C;SPAN=9904;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:27:28.7:38.6,0,28.7:14:0:-38.69:38.69\n9\t136782783\t520714:2\tA\t]9:136772879]A\t38\tPASS\tEVDNC=ASSMB;HOMSEQ=AA;MAPQ=60;MATEID=520714:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_9_136759001_136784001_89C;SPAN=9904;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:27:28.7:38.6,0,28.7:14:0:-38.69:38.69\n9\t137359057\t521016:1\tC\tC[9:137361528[\t82\tPASS\tDISC_MAPQ=60;EVDNC=TSI_G;HOMSEQ=TCGATCTCCTGACCTCGT;INSERTION=GATCCGTCCGCCTCGGCCTT;MAPQ=60;MATEID=521016:2;MATENM=1;NM=0;NUMPARTS=3;SCTG=c_9_137347001_137372001_0C;SPAN=2471;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:27:5:7.5:82.5,7.5,0:23:8:-82.52:82.52\n9\t137361528\t521016:2\tA\t]9:137359057]A\t82\tPASS\tDISC_MAPQ=46;EVDNC=TSI_G;HOMSEQ=TCGATCTCCTGACCTCGT;INSERTION=GATCCGTCCGCCTCGGCCTT;MAPQ=60;MATEID=521016:1;MATENM=0;NM=1;NUMPARTS=3;SCTG=c_9_137347001_137372001_0C;SPAN=2471;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:27:5:7.5:82.5,7.5,0:23:8:-82.52:82.52\n9\t137506126\t521125:1\tC\t]9:137559807]C\t99\tPASS\tDISC_MAPQ=51;EVDNC=ASDIS;HOMSEQ=C;MAPQ=60;MATEID=521125:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_137543001_137568001_26C;SPAN=53681;SUBN=1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:37:23:10.2:112.2,10.2,0:24:26:-112.2:112.2\n9\t137529033\t521126:1\tT\tT[9:137547812[\t19\tPASS\tEVDNC=ASSMB;HOMSEQ=CTCT;MAPQ=60;MATEID=521126:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_137543001_137568001_36C;SPAN=18779;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:36:19.7:19.7,0,69.2:9:0:-19.59:21.23\n9\t137546395\t521158:1\tC\t]9:137681397]C\t34\tPASS\tDISC_MAPQ=55;EVDNC=ASDIS;MAPQ=60;MATEID=521158:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_137665501_137690501_62C;SPAN=135002;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:32:34.1:34.1,0,44:9:9:-33.92:34.03\n9\t137547812\t521126:2\tC\t]9:137529033]C\t19\tPASS\tEVDNC=ASSMB;HOMSEQ=CTCT;MAPQ=60;MATEID=521126:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_137543001_137568001_36C;SPAN=18779;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:36:19.7:19.7,0,69.2:9:0:-19.59:21.23\n9\t137559807\t521125:2\tC\tC[9:137506126[\t99\tPASS\tDISC_MAPQ=43;EVDNC=ASDIS;HOMSEQ=C;MAPQ=60;MATEID=521125:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_137543001_137568001_26C;SPAN=53681;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:37:23:10.2:112.2,10.2,0:24:26:-112.2:112.2\n9\t137681397\t521158:2\tT\tT[9:137546395[\t34\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;MAPQ=60;MATEID=521158:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_137665501_137690501_62C;SPAN=135002;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:32:34.1:34.1,0,44:9:9:-33.92:34.03\n9\t137888932\t521254:1\tG\tG[9:137890829[\t57\tPASS\tDISC_MAPQ=7;EVDNC=ASDIS;HOMSEQ=CC;MAPQ=19;MATEID=521254:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_137886001_137911001_34C;SPAN=1897;SUBN=1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:20:31:17.9:57.5,0,17.9:12:10:-58.24:58.24\n9\t137890829\t521254:2\tG\t]9:137888932]G\t57\tPASS\tDISC_MAPQ=28;EVDNC=ASDIS;HOMSEQ=CC;MAPQ=60;MATEID=521254:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_137886001_137911001_34C;SPAN=1897;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:20:31:17.9:57.5,0,17.9:12:10:-58.24:58.24\n9\t138145282\t521500:1\tG\t[10:79032[G\t18\tPASS\tDISC_MAPQ=16;EVDNC=DSCRD;IMPRECISE;MAPQ=16;MATEID=521500:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=9:138145282(-)-10:79032(-)__10_73501_98501D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:28:18.5:18.5,0,51.5:0:8:-18.54:19.42\n10\t79032\t521500:2\tT\t[9:138145282[T\t18\tPASS\tDISC_MAPQ=44;EVDNC=DSCRD;IMPRECISE;MAPQ=44;MATEID=521500:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=9:138145282(-)-10:79032(-)__10_73501_98501D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:28:18.5:18.5,0,51.5:0:8:-18.54:19.42\n10\t337269\t521638:1\tT\t]10:337797]T\t35\tPASS\tDISC_MAPQ=33;EVDNC=ASDIS;HOMSEQ=TGTGTGTGTG;MAPQ=60;MATEID=521638:2;MATENM=3;NM=0;NUMPARTS=2;SCTG=c_10_318501_343501_61C;SPAN=528;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:15:52:35:35,0,94.4:13:2:-34.9:36.48\n10\t337797\t521638:2\tG\tG[10:337269[\t35\tPASS\tDISC_MAPQ=43;EVDNC=ASDIS;HOMSEQ=TGTGTGTGTG;MAPQ=33;MATEID=521638:1;MATENM=0;NM=3;NUMPARTS=2;SCTG=c_10_318501_343501_61C;SPAN=528;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:15:52:35:35,0,94.4:13:2:-34.9:36.48\n10\t367969\t521652:1\tC\tC[10:368184[\t56\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=CACAGCCCCAGGTGCCTCCGACGGGGGCCCGGGAAGCCCGCGGTTGCTCTCACTGCTGCACAGCCCCAGGTGCCTC;MAPQ=60;MATEID=521652:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_10_367501_392501_24C;SPAN=215;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:19:19:5.1:56.1,5.1,0:12:8:-56.11:56.11\n10\t368184\t521652:2\tC\t]10:367969]C\t56\tPASS\tDISC_MAPQ=58;EVDNC=ASDIS;HOMSEQ=CACAGCCCCAGGTGCCTCCGACGGGGGCCCGGGAAGCCCGCGGTTGCTCTCACTGCTGCACAGCCCCAGGTGCCTC;MAPQ=60;MATEID=521652:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_10_367501_392501_24C;SPAN=215;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:19:19:5.1:56.1,5.1,0:12:8:-56.11:56.11\n10\t417653\t521681:1\tC\tC[10:418146[\t99\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;INSERTION=GCCTGTGCCTGTCGGCTCAAATAGGCCTCCCTGTCTGCCTGCG;MAPQ=16;MATEID=521681:2;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_10_416501_441501_19C;SPAN=493;SUBN=2;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:51:33:14.1:155.1,14.1,0:49:7:-155.1:155.1\n10\t418146\t521681:2\tC\t]10:417653]C\t99\tPASS\tDISC_MAPQ=36;EVDNC=ASDIS;INSERTION=GCCTGTGCCTGTCGGCTCAAATAGGCCTCCCTGTCTGCCTGCG;MAPQ=60;MATEID=521681:1;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_10_416501_441501_19C;SPAN=493;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:51:33:14.1:155.1,14.1,0:49:7:-155.1:155.1\n10\t846157\t521947:1\tA\t]10:1048151]A\t31\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;MAPQ=60;MATEID=521947:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_10_1029001_1054001_64C;SPAN=201994;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:28:31.7:31.7,0,38.3:9:10:-31.74:31.78\n10\t1048151\t521947:2\tG\tG[10:846157[\t31\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;MAPQ=60;MATEID=521947:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_10_1029001_1054001_64C;SPAN=201994;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:28:31.7:31.7,0,38.3:9:10:-31.74:31.78\n10\t1174091\t522022:1\tT\t]10:1174299]T\t8\tPASS\tEVDNC=ASSMB;HOMSEQ=TCAGGACAGAGATGGGTGTATGTGGTCTA;MAPQ=60;MATEID=522022:2;MATENM=4;NM=0;NUMPARTS=2;SCTG=c_10_1151501_1176501_99C;SPAN=208;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:75:8.6:8.6,0,180.2:9:0:-8.627:18.06\n10\t1174299\t522022:2\tA\tA[10:1174091[\t8\tPASS\tEVDNC=ASSMB;HOMSEQ=TCAGGACAGAGATGGGTGTATGTGGTCTA;MAPQ=60;MATEID=522022:1;MATENM=0;NM=4;NUMPARTS=2;SCTG=c_10_1151501_1176501_99C;SPAN=208;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:75:8.6:8.6,0,180.2:9:0:-8.627:18.06\n10\t2256296\t522628:1\tG\tG[10:2257474[\t50\tPASS\tEVDNC=ASSMB;INSERTION=TT;MAPQ=60;MATEID=522628:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_10_2254001_2279001_146C;SPAN=1178;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:19:43:50.6:50.6,0,57.2:19:0:-50.63:50.66\n10\t2257474\t522628:2\tA\t]10:2256296]A\t50\tPASS\tEVDNC=ASSMB;INSERTION=TT;MAPQ=60;MATEID=522628:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_10_2254001_2279001_146C;SPAN=1178;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:19:43:50.6:50.6,0,57.2:19:0:-50.63:50.66\n10\t3040693\t730799:1\tG\tG]15:53117362]\t42\tPASS\tDISC_MAPQ=17;EVDNC=DSCRD;IMPRECISE;MAPQ=17;MATEID=730799:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=10:3040693(+)-15:53117362(+)__15_53116001_53141001D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:14:2:3.9:42.9,3.9,0:0:14:-42.91:42.91\n10\t3242279\t523212:1\tT\t]10:3242421]T\t85\tPASS\tEVDNC=ASSMB;HOMSEQ=TGTGTGTGT;MAPQ=60;MATEID=523212:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_10_3234001_3259001_109C;SPAN=142;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:32:72:85.4:85.4,0,95.3:32:0:-85.39:85.43\n10\t3242421\t523212:2\tT\tT[10:3242279[\t85\tPASS\tEVDNC=ASSMB;HOMSEQ=TGTGTGTGT;MAPQ=60;MATEID=523212:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_10_3234001_3259001_109C;SPAN=142;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:32:72:85.4:85.4,0,95.3:32:0:-85.39:85.43\n10\t4247987\t523750:1\tT\tT[10:4249489[\t99\tPASS\tDISC_MAPQ=59;EVDNC=DSCRD;IMPRECISE;MAPQ=59;MATEID=523750:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=10:4247987(+)-10:4249489(-)__10_4238501_4263501D;SPAN=1502;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:53:13:14.7:161.7,14.7,0:0:53:-161.7:161.7\n10\t4249489\t523750:2\tC\t]10:4247987]C\t99\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=523750:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=10:4247987(+)-10:4249489(-)__10_4238501_4263501D;SPAN=1502;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:53:13:14.7:161.7,14.7,0:0:53:-161.7:161.7\n10\t4592619\t523879:1\tA\tA[10:4592929[\t99\tPASS\tEVDNC=ASSMB;HOMSEQ=AAGAAAAAGA;MAPQ=60;MATEID=523879:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_4581501_4606501_146C;SPAN=310;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:54:43:15:165,15,0:54:0:-165:165\n10\t4592929\t523879:2\tA\t]10:4592619]A\t99\tPASS\tEVDNC=ASSMB;HOMSEQ=AAGAAAAAGA;MAPQ=60;MATEID=523879:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_4581501_4606501_146C;SPAN=310;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:54:43:15:165,15,0:54:0:-165:165\n10\t4666326\t523910:1\tT\tT[10:4668331[\t99\tPASS\tEVDNC=ASSMB;INSERTION=ATAG;MAPQ=60;MATEID=523910:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_10_4655001_4680001_55C;SPAN=2005;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:38:20:10.5:115.5,10.5,0:38:0:-115.5:115.5\n10\t4668331\t523910:2\tT\t]10:4666326]T\t99\tPASS\tEVDNC=ASSMB;INSERTION=ATAG;MAPQ=60;MATEID=523910:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_10_4655001_4680001_55C;SPAN=2005;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:38:20:10.5:115.5,10.5,0:38:0:-115.5:115.5\n10\t5169108\t524180:1\tC\t[Un_JTFH01001594v1_decoy:1[C\t36\tPASS\tDISC_MAPQ=255;EVDNC=TSI_L;HOMSEQ=AAAGACAGCTCAGGCACAGGGGGAGGTGCGG;MAPQ=52;MATEID=524180:2;MATENM=0;NM=0;NUMPARTS=3;REPSEQ=GG;SCTG=c_10_5169501_5194501_110C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:12:0:3.3:36.3,3.3,0:12:0:-36.31:36.31\n10\t5245354\t524219:1\tT\tT[10:5251383[\t99\tPASS\tEVDNC=ASSMB;HOMSEQ=AAAAAAATAGTGTAAAGT;MAPQ=60;MATEID=524219:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_5243001_5268001_23C;SPAN=6029;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:35:40:4.5:108.9,4.5,0:35:0:-111.7:111.7\n10\t5251383\t524219:2\tA\t]10:5245354]A\t99\tPASS\tEVDNC=ASSMB;HOMSEQ=AAAAAAATAGTGTAAAGT;MAPQ=60;MATEID=524219:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_5243001_5268001_23C;SPAN=6029;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:35:40:4.5:108.9,4.5,0:35:0:-111.7:111.7\n10\t6210012\t524800:1\tA\tA[10:6210952[\t65\tPASS\tEVDNC=ASSMB;HOMSEQ=CCCGCCTCGGCCTCCCA;MAPQ=60;MATEID=524800:2;MATENM=2;NM=2;NUMPARTS=2;SCTG=c_10_6198501_6223501_10C;SPAN=940;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:23:36:23:65.9,0,23:23:0:-66.82:66.82\n10\t6210952\t524800:2\tC\t]10:6210012]C\t65\tPASS\tEVDNC=ASSMB;HOMSEQ=CCCGCCTCGGCCTCCCA;MAPQ=60;MATEID=524800:1;MATENM=2;NM=2;NUMPARTS=2;SCTG=c_10_6198501_6223501_10C;SPAN=940;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:23:36:23:65.9,0,23:23:0:-66.82:66.82\n10\t6369618\t524908:1\tT\tT[10:6375668[\t95\tPASS\tEVDNC=ASSMB;HOMSEQ=CAGCAAATCATTTTCCT;MAPQ=60;MATEID=524908:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_6345501_6370501_53C;SPAN=6050;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:29:32:8.7:95.7,8.7,0:29:0:-94:94\n10\t6375668\t524908:2\tC\t]10:6369618]C\t95\tPASS\tEVDNC=ASSMB;HOMSEQ=CAGCAAATCATTTTCCT;MAPQ=60;MATEID=524908:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_6345501_6370501_53C;SPAN=6050;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:29:32:8.7:95.7,8.7,0:29:0:-94:94\n10\t6894560\t525248:1\tA\t]10:6894663]A\t99\tPASS\tEVDNC=ASSMB;INSERTION=GCATGGTATGGAGTAGCAGTTTCCAGCATACTGCATGGTATGGAGTAGCAGTTTCA;MAPQ=60;MATEID=525248:2;MATENM=2;NM=2;NUMPARTS=2;SCTG=c_10_6884501_6909501_96C;SPAN=103;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:52:169:99:124.4,0,299.3:52:0:-124.1:128.2\n10\t6894663\t525248:2\tT\tT[10:6894560[\t99\tPASS\tEVDNC=ASSMB;INSERTION=GCATGGTATGGAGTAGCAGTTTCCAGCATACTGCATGGTATGGAGTAGCAGTTTCA;MAPQ=60;MATEID=525248:1;MATENM=2;NM=2;NUMPARTS=2;SCTG=c_10_6884501_6909501_96C;SPAN=103;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:52:169:99:124.4,0,299.3:52:0:-124.1:128.2\n10\t7035078\t525336:1\tT\tT[10:7036340[\t99\tPASS\tEVDNC=ASSMB;INSERTION=A;MAPQ=60;MATEID=525336:2;MATENM=2;NM=1;NUMPARTS=2;SCTG=c_10_7031501_7056501_19C;SPAN=1262;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:49:26:13.5:148.5,13.5,0:49:0:-148.5:148.5\n10\t7036340\t525336:2\tC\t]10:7035078]C\t99\tPASS\tEVDNC=ASSMB;INSERTION=A;MAPQ=60;MATEID=525336:1;MATENM=1;NM=2;NUMPARTS=2;SCTG=c_10_7031501_7056501_19C;SPAN=1262;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:49:26:13.5:148.5,13.5,0:49:0:-148.5:148.5\n10\t7526497\t525537:1\tT\t]10:7527082]T\t46\tPASS\tDISC_MAPQ=24;EVDNC=DSCRD;IMPRECISE;MAPQ=24;MATEID=525537:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=10:7526497(-)-10:7527082(+)__10_7521501_7546501D;SPAN=585;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:18:47:46.4:46.4,0,69.5:0:18:-46.21:46.52\n10\t7527082\t525537:2\tC\tC[10:7526497[\t46\tPASS\tDISC_MAPQ=18;EVDNC=DSCRD;IMPRECISE;MAPQ=18;MATEID=525537:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=10:7526497(-)-10:7527082(+)__10_7521501_7546501D;SPAN=585;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:18:47:46.4:46.4,0,69.5:0:18:-46.21:46.52\n10\t7751867\t525705:1\tG\tG[10:7752076[\t74\tPASS\tEVDNC=ASSMB;HOMSEQ=AAAAGTAACGATG;MAPQ=60;MATEID=525705:2;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_10_7742001_7767001_8C;SPAN=209;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:25:31:1.4:74,0,1.4:25:0:-77.51:77.51\n10\t7752076\t525705:2\tA\t]10:7751867]A\t74\tPASS\tEVDNC=ASSMB;HOMSEQ=AAAAGTAACGATG;MAPQ=60;MATEID=525705:1;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_10_7742001_7767001_8C;SPAN=209;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:25:31:1.4:74,0,1.4:25:0:-77.51:77.51\n10\t7819172\t525836:1\tT\t[10:7999791[T\t53\tPASS\tDISC_MAPQ=255;EVDNC=ASDIS;INSERTION=CAATGCAGGGGCTCAGGCTGGTCAACAGAGCT;MAPQ=60;MATEID=525836:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_7987001_8012001_49C;SPAN=180619;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:19:32:24.2:53.9,0,24.2:11:15:-54.21:54.21\n10\t7953950\t525815:1\tT\tT[10:7954929[\t99\tPASS\tDISC_MAPQ=58;EVDNC=DSCRD;IMPRECISE;MAPQ=58;MATEID=525815:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=10:7953950(+)-10:7954929(-)__10_7938001_7963001D;SPAN=979;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:35:25:9.6:105.6,9.6,0:0:35:-105.6:105.6\n10\t7954929\t525815:2\tA\t]10:7953950]A\t99\tPASS\tDISC_MAPQ=58;EVDNC=DSCRD;IMPRECISE;MAPQ=58;MATEID=525815:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=10:7953950(+)-10:7954929(-)__10_7938001_7963001D;SPAN=979;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:35:25:9.6:105.6,9.6,0:0:35:-105.6:105.6\n10\t7998109\t525843:1\tT\tT]10:8023057]\t23\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=525843:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=10:7998109(+)-10:8023057(+)__10_7987001_8012001D;SPAN=24948;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:23:23.3:23.3,0,33.2:0:9:-23.24:23.37\n10\t7999791\t525836:2\tT\t[10:7819172[T\t53\tPASS\tDISC_MAPQ=56;EVDNC=ASDIS;INSERTION=CAATGCAGGGGCTCAGGCTGGTCAACAGAGCT;MAPQ=60;MATEID=525836:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_7987001_8012001_49C;SPAN=180619;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:19:32:24.2:53.9,0,24.2:11:15:-54.21:54.21\n10\t8023057\t525843:2\tT\tT]10:7998109]\t23\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=525843:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=10:7998109(+)-10:8023057(+)__10_7987001_8012001D;SPAN=24948;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:23:23.3:23.3,0,33.2:0:9:-23.24:23.37\n10\t8436075\t526239:1\tA\t]10:8535177]A\t28\tPASS\tEVDNC=ASSMB;INSERTION=TAC;MAPQ=60;MATEID=526239:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_10_8526001_8551001_176C;SPAN=99102;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:28:28.4:28.4,0,41.6:11:0:-28.44:28.58\n10\t8535177\t526239:2\tA\tA[10:8436075[\t28\tPASS\tEVDNC=ASSMB;INSERTION=TAC;MAPQ=60;MATEID=526239:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_10_8526001_8551001_176C;SPAN=99102;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:28:28.4:28.4,0,41.6:11:0:-28.44:28.58\n10\t8740029\t526412:1\tT\tT[10:8740345[\t99\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=GCTTAGTTTTCTTT;MAPQ=60;MATEID=526412:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_8722001_8747001_74C;SPAN=316;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:37:33:10.2:112.2,10.2,0:26:12:-112.2:112.2\n10\t8740345\t526412:2\tG\t]10:8740029]G\t99\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=GCTTAGTTTTCTTT;MAPQ=60;MATEID=526412:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_8722001_8747001_74C;SPAN=316;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:37:33:10.2:112.2,10.2,0:26:12:-112.2:112.2\n10\t9081206\t526682:1\tA\t]10:9240096]A\t11\tPASS\tEVDNC=ASSMB;HOMSEQ=ATGA;MAPQ=60;MATEID=526682:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_9065001_9090001_1C;SPAN=158890;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:7:43:11:11,0,96.8:7:0:-11.02:15.04\n10\t9240096\t526682:2\tA\tA[10:9081206[\t11\tPASS\tEVDNC=ASSMB;HOMSEQ=ATGA;MAPQ=60;MATEID=526682:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_9065001_9090001_1C;SPAN=158890;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:7:43:11:11,0,96.8:7:0:-11.02:15.04\n10\t11283839\t527473:1\tA\t]10:11284626]A\t32\tPASS\tDISC_MAPQ=15;EVDNC=DSCRD;IMPRECISE;MAPQ=15;MATEID=527473:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=10:11283839(-)-10:11284626(+)__10_11270001_11295001D;SPAN=787;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:50:32.3:32.3,0,91.7:0:14:-32.16:33.83\n10\t11284626\t527473:2\tA\tA[10:11283839[\t32\tPASS\tDISC_MAPQ=17;EVDNC=DSCRD;IMPRECISE;MAPQ=17;MATEID=527473:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=10:11283839(-)-10:11284626(+)__10_11270001_11295001D;SPAN=787;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:50:32.3:32.3,0,91.7:0:14:-32.16:33.83\n10\t11903434\t527787:1\tC\tC[10:11903772[\t92\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=GC;MAPQ=60;MATEID=527787:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_11882501_11907501_27C;SPAN=338;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:30:27:8.4:92.4,8.4,0:24:9:-92.42:92.42\n10\t11903772\t527787:2\tG\t]10:11903434]G\t92\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=GC;MAPQ=60;MATEID=527787:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_11882501_11907501_27C;SPAN=338;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:30:27:8.4:92.4,8.4,0:24:9:-92.42:92.42\n10\t12518474\t528136:1\tT\tT[10:12520975[\t56\tPASS\tEVDNC=ASSMB;HOMSEQ=CTTTATTCATTCTT;MAPQ=60;MATEID=528136:2;MATENM=3;NM=2;NUMPARTS=2;SCTG=c_10_12519501_12544501_2C;SPAN=2501;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:19:5:5.1:56.1,5.1,0:19:0:-56.11:56.11\n10\t12520975\t528136:2\tC\t]10:12518474]C\t56\tPASS\tEVDNC=ASSMB;HOMSEQ=CTTTATTCATTCTT;MAPQ=60;MATEID=528136:1;MATENM=2;NM=3;NUMPARTS=2;SCTG=c_10_12519501_12544501_2C;SPAN=2501;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:19:5:5.1:56.1,5.1,0:19:0:-56.11:56.11\n10\t13490359\t528682:1\tT\t]10:13613251]T\t52\tPASS\tEVDNC=ASSMB;HOMSEQ=TG;MAPQ=60;MATEID=528682:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_13597501_13622501_37C;SPAN=122892;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:18:26:12.5:52.1,0,12.5:18:0:-53.39:53.39\n10\t13613251\t528682:2\tG\tG[10:13490359[\t52\tPASS\tEVDNC=ASSMB;HOMSEQ=TG;MAPQ=60;MATEID=528682:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_13597501_13622501_37C;SPAN=122892;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:18:26:12.5:52.1,0,12.5:18:0:-53.39:53.39\n10\t15915313\t96983:2\tA\t]2:90371363]A\t92\tPASS\tDISC_MAPQ=58;EVDNC=ASDIS;INSERTION=TTTTTTTTTA;MAPQ=60;MATEID=96983:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_2_90356001_90381001_107C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:35:81:92.9:92.9,0,109.4:27:14:-92.77:92.86\n10\t18214147\t530576:1\tA\tA[10:18214661[\t40\tPASS\tEVDNC=ASSMB;HOMSEQ=A;MAPQ=60;MATEID=530576:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_18203501_18228501_20C;SPAN=514;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:22:13.7:40.1,0,13.7:14:0:-40.63:40.63\n10\t18214661\t530576:2\tA\t]10:18214147]A\t40\tPASS\tEVDNC=ASSMB;HOMSEQ=A;MAPQ=60;MATEID=530576:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_18203501_18228501_20C;SPAN=514;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:22:13.7:40.1,0,13.7:14:0:-40.63:40.63\n10\t19116995\t530955:1\tT\t]10:19211610]T\t39\tPASS\tDISC_MAPQ=55;EVDNC=ASDIS;HOMSEQ=TGAGGCAGGATAATCGCTTGAACC;MAPQ=60;MATEID=530955:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_10_19208001_19233001_99C;SPAN=94615;SUBN=1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:12:13:3.6:39.6,3.6,0:9:3:-39.28:39.28\n10\t19211610\t530955:2\tC\tC[10:19116995[\t39\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TGAGGCAGGATAATCGCTTGAACC;MAPQ=60;MATEID=530955:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_10_19208001_19233001_99C;SPAN=94615;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:12:13:3.6:39.6,3.6,0:9:3:-39.28:39.28\n10\t19321258\t531031:1\tT\tT[10:19362086[\t20\tPASS\tEVDNC=ASSMB;INSERTION=AA;MAPQ=60;MATEID=531031:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_10_19355001_19380001_8C;SPAN=40828;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:20:20.9:20.9,0,27.5:8:0:-20.79:20.87\n10\t19362086\t531031:2\tA\t]10:19321258]A\t20\tPASS\tEVDNC=ASSMB;INSERTION=AA;MAPQ=60;MATEID=531031:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_10_19355001_19380001_8C;SPAN=40828;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:20:20.9:20.9,0,27.5:8:0:-20.79:20.87\n10\t19707705\t531188:1\tT\tT[10:19709146[\t30\tPASS\tDISC_MAPQ=56;EVDNC=DSCRD;IMPRECISE;MAPQ=56;MATEID=531188:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=10:19707705(+)-10:19709146(-)__10_19698001_19723001D;SPAN=1441;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:21:20.6:30.5,0,20.6:0:11:-30.47:30.47\n10\t19709146\t531188:2\tC\t]10:19707705]C\t30\tPASS\tDISC_MAPQ=46;EVDNC=DSCRD;IMPRECISE;MAPQ=46;MATEID=531188:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=10:19707705(+)-10:19709146(-)__10_19698001_19723001D;SPAN=1441;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:21:20.6:30.5,0,20.6:0:11:-30.47:30.47\n10\t20378330\t531455:1\tG\tG[10:20378637[\t72\tPASS\tEVDNC=ASSMB;HOMSEQ=AAAAGATTAGTAAG;MAPQ=60;MATEID=531455:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_20359501_20384501_59C;SPAN=307;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:23:24:6.6:72.6,6.6,0:23:0:-72.62:72.62\n10\t20378637\t531455:2\tA\t]10:20378330]A\t72\tPASS\tEVDNC=ASSMB;HOMSEQ=AAAAGATTAGTAAG;MAPQ=60;MATEID=531455:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_20359501_20384501_59C;SPAN=307;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:23:24:6.6:72.6,6.6,0:23:0:-72.62:72.62\n10\t21689372\t531851:1\tT\t]10:21772706]T\t28\tPASS\tEVDNC=ASSMB;HOMSEQ=TTTC;MAPQ=60;MATEID=531851:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_21756001_21781001_41C;SPAN=83334;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:18:14.9:28.1,0,14.9:10:0:-28.08:28.08\n10\t21717820\t52839:2\tC\t[1:197544937[C\t49\tPASS\tDISC_MAPQ=0;EVDNC=TSI_L;INSERTION=CCCTTCTCC;MAPQ=53;MATEID=52839:1;MATENM=14;NM=0;NUMPARTS=3;REPSEQ=CC;SCTG=c_1_197543501_197568501_0C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:17:8:4.5:49.5,4.5,0:15:9:-49.51:49.51\n10\t21772706\t531851:2\tC\tC[10:21689372[\t28\tPASS\tEVDNC=ASSMB;HOMSEQ=TTTC;MAPQ=60;MATEID=531851:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_21756001_21781001_41C;SPAN=83334;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:18:14.9:28.1,0,14.9:10:0:-28.08:28.08\n10\t25203596\t532849:1\tC\tC[10:25204023[\t89\tPASS\tDISC_MAPQ=46;EVDNC=ASDIS;INSERTION=A;MAPQ=43;MATEID=532849:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_25186001_25211001_27C;SPAN=427;SUBN=1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:29:29:8.1:89.1,8.1,0:22:12:-89.12:89.12\n10\t25204023\t532849:2\tT\t]10:25203596]T\t89\tPASS\tDISC_MAPQ=40;EVDNC=ASDIS;INSERTION=A;MAPQ=60;MATEID=532849:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_25186001_25211001_27C;SPAN=427;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:29:29:8.1:89.1,8.1,0:22:12:-89.12:89.12\n10\t26065838\t533215:1\tC\tC[10:26066145[\t21\tPASS\tEVDNC=ASSMB;HOMSEQ=GAGCAGTGGGC;MAPQ=60;MATEID=533215:2;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_10_26043501_26068501_3C;SPAN=307;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:17:18.5:21.8,0,18.5:8:0:-21.63:21.63\n10\t26066145\t533215:2\tG\t]10:26065838]G\t21\tPASS\tEVDNC=ASSMB;HOMSEQ=GAGCAGTGGGC;MAPQ=60;MATEID=533215:1;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_10_26043501_26068501_3C;SPAN=307;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:17:18.5:21.8,0,18.5:8:0:-21.63:21.63\n10\t26710119\t533592:1\tA\tA[10:26713225[\t92\tPASS\tDISC_MAPQ=58;EVDNC=ASDIS;HOMSEQ=GAGGTTGCAGTGAGCCGAGATCACGCCATTGCA;MAPQ=60;MATEID=533592:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_10_26705001_26730001_95C;SPAN=3106;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:31:21:8.4:92.4,8.4,0:20:17:-92.42:92.42\n10\t26713225\t533592:2\tG\t]10:26710119]G\t92\tPASS\tDISC_MAPQ=54;EVDNC=ASDIS;HOMSEQ=GAGGTTGCAGTGAGCCGAGATCACGCCATTGCA;MAPQ=60;MATEID=533592:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_10_26705001_26730001_95C;SPAN=3106;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:31:21:8.4:92.4,8.4,0:20:17:-92.42:92.42\n10\t26935274\t533742:1\tA\tA[10:26939157[\t32\tPASS\tEVDNC=ASSMB;HOMSEQ=ACA;MAPQ=60;MATEID=533742:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_26925501_26950501_46C;SPAN=3883;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:51:32:32,0,94.7:14:0:-31.88:33.69\n10\t26935698\t533746:1\tT\t]10:26940472]T\t20\tPASS\tDISC_MAPQ=52;EVDNC=DSCRD;IMPRECISE;MAPQ=52;MATEID=533746:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=10:26935698(-)-10:26940472(+)__10_26925501_26950501D;SPAN=4774;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:45:20.3:20.3,0,92.9:0:10:-20.36:23\n10\t26939157\t533742:2\tA\t]10:26935274]A\t32\tPASS\tEVDNC=ASSMB;HOMSEQ=ACA;MAPQ=60;MATEID=533742:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_26925501_26950501_46C;SPAN=3883;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:51:32:32,0,94.7:14:0:-31.88:33.69\n10\t26940472\t533746:2\tT\tT[10:26935698[\t20\tPASS\tDISC_MAPQ=42;EVDNC=DSCRD;IMPRECISE;MAPQ=42;MATEID=533746:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=10:26935698(-)-10:26940472(+)__10_26925501_26950501D;SPAN=4774;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:45:20.3:20.3,0,92.9:0:10:-20.36:23\n10\t30957818\t535680:1\tA\tA[10:30962841[\t64\tPASS\tEVDNC=ASSMB;INSERTION=TGTTCAA;MAPQ=60;MATEID=535680:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_30943501_30968501_17C;SPAN=5023;SUBN=1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:22:31:11.3:64.1,0,11.3:22:0:-65.69:65.69\n10\t30962841\t535680:2\tC\t]10:30957818]C\t64\tPASS\tEVDNC=ASSMB;INSERTION=TGTTCAA;MAPQ=60;MATEID=535680:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_30943501_30968501_17C;SPAN=5023;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:22:31:11.3:64.1,0,11.3:22:0:-65.69:65.69\n10\t31154439\t535744:1\tG\tG[10:31155936[\t44\tPASS\tEVDNC=ASSMB;HOMSEQ=TTGGGAGGCTGAGGCAGG;MAPQ=60;MATEID=535744:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_31139501_31164501_12C;SPAN=1497;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:16:28:25.1:44.9,0,25.1:16:0:-45.23:45.23\n10\t31155936\t535744:2\tT\t]10:31154439]T\t44\tPASS\tEVDNC=ASSMB;HOMSEQ=TTGGGAGGCTGAGGCAGG;MAPQ=60;MATEID=535744:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_31139501_31164501_12C;SPAN=1497;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:16:28:25.1:44.9,0,25.1:16:0:-45.23:45.23\n10\t31687153\t535880:1\tT\t]10:31687467]T\t14\tPASS\tDISC_MAPQ=4;EVDNC=TSI_L;HOMSEQ=TATATACATTATTTATATATAAATATATATTTTTATATACATTATTTATATATAAATATATATTTTTATATACATTATTTATATATAAATATGTATTTTTATATACATTATTTATATATAAATATGTATTTTTATATACATTATTTATATATAAATATGTATTTATATATACATTATTTATATATAAATATGTATTTATATATACATTATTTATATATAAATATGTATTTATATATACATTATTTATATATAAATGTATATATTTATATATACATTATTTATATATAAATATATATTTATATATACATTATATATAAATATATATTTATATATA;INSERTION=ATT;MAPQ=60;MATEID=535880:2;MATENM=29;NM=0;NUMPARTS=5;REPSEQ=ATATAT;SCTG=c_10_31678501_31703501_4C;SPAN=314;SUBN=2;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:23:14.5:14.5,0,27.5:7:2:-14.35:14.66\n10\t31687467\t535880:2\tT\tT[10:31687153[\t14\tPASS\tDISC_MAPQ=15;EVDNC=TSI_L;HOMSEQ=TATATACATTATTTATATATAAATATATATTTTTATATACATTATTTATATATAAATATATATTTTTATATACATTATTTATATATAAATATGTATTTTTATATACATTATTTATATATAAATATGTATTTTTATATACATTATTTATATATAAATATGTATTTATATATACATTATTTATATATAAATATGTATTTATATATACATTATTTATATATAAATATGTATTTATATATACATTATTTATATATAAATGTATATATTTATATATACATTATTTATATATAAATATATATTTATATATACATTATATATAAATATATATTTATATATA;INSERTION=ATT;MAPQ=24;MATEID=535880:1;MATENM=0;NM=29;NUMPARTS=5;REPSEQ=ATATAT;SCTG=c_10_31678501_31703501_4C;SPAN=314;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:23:14.5:14.5,0,27.5:7:2:-14.35:14.66\n10\t31968967\t535994:1\tG\tG[10:31971685[\t54\tPASS\tEVDNC=ASSMB;HOMSEQ=AAAAGATATTAGTTG;MAPQ=60;MATEID=535994:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_31948001_31973001_30C;SPAN=2718;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:19:31:21.2:54.2,0,21.2:19:0:-54.63:54.63\n10\t31971685\t535994:2\tA\t]10:31968967]A\t54\tPASS\tEVDNC=ASSMB;HOMSEQ=AAAAGATATTAGTTG;MAPQ=60;MATEID=535994:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_31948001_31973001_30C;SPAN=2718;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:19:31:21.2:54.2,0,21.2:19:0:-54.63:54.63\n10\t32416809\t536235:1\tC\tC[10:32417137[\t99\tPASS\tEVDNC=ASSMB;HOMSEQ=ATATTCTATTC;MAPQ=60;MATEID=536235:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_32413501_32438501_52C;SPAN=328;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:46:25:12.6:138.6,12.6,0:46:0:-138.6:138.6\n10\t32417137\t536235:2\tA\t]10:32416809]A\t99\tPASS\tEVDNC=ASSMB;HOMSEQ=ATATTCTATTC;MAPQ=60;MATEID=536235:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_32413501_32438501_52C;SPAN=328;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:46:25:12.6:138.6,12.6,0:46:0:-138.6:138.6\n10\t33095434\t536439:1\tC\t]10:33095535]C\t54\tPASS\tEVDNC=ASSMB;INSERTION=ATCA;MAPQ=60;MATEID=536439:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_33075001_33100001_34C;SPAN=101;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:21:54:54.2:54.2,0,80.6:21:0:-54.14:54.45\n10\t33095535\t536439:2\tT\tT[10:33095434[\t54\tPASS\tEVDNC=ASSMB;INSERTION=ATCA;MAPQ=60;MATEID=536439:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_33075001_33100001_34C;SPAN=101;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:21:54:54.2:54.2,0,80.6:21:0:-54.14:54.45\n10\t33203726\t536476:1\tT\tT[10:33204002[\t95\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=CAAAGACTGCTTTT;MAPQ=60;MATEID=536476:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_33197501_33222501_7C;SPAN=276;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:32:31:8.7:95.7,8.7,0:27:7:-95.72:95.72\n10\t33204002\t536476:2\tC\t]10:33203726]C\t95\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=CAAAGACTGCTTTT;MAPQ=60;MATEID=536476:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_33197501_33222501_7C;SPAN=276;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:32:31:8.7:95.7,8.7,0:27:7:-95.72:95.72\n10\t34395555\t536911:1\tC\tC[10:34395866[\t62\tPASS\tEVDNC=ASSMB;HOMSEQ=AAGAAAAACATCATC;MAPQ=60;MATEID=536911:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_34373501_34398501_34C;SPAN=311;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:20:23:3:62.7,3,0:20:0:-63.68:63.68\n10\t34395866\t536911:2\tA\t]10:34395555]A\t62\tPASS\tEVDNC=ASSMB;HOMSEQ=AAGAAAAACATCATC;MAPQ=60;MATEID=536911:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_34373501_34398501_34C;SPAN=311;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:20:23:3:62.7,3,0:20:0:-63.68:63.68\n10\t35304294\t537250:1\tA\tA[10:35304609[\t49\tPASS\tEVDNC=ASSMB;HOMSEQ=CTTTTTTCTCCTTTTA;MAPQ=60;MATEID=537250:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_35304501_35329501_29C;SPAN=315;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:17:14:4.5:49.5,4.5,0:17:0:-49.51:49.51\n10\t35304609\t537250:2\tC\t]10:35304294]C\t49\tPASS\tEVDNC=ASSMB;HOMSEQ=CTTTTTTCTCCTTTTA;MAPQ=60;MATEID=537250:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_35304501_35329501_29C;SPAN=315;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:17:14:4.5:49.5,4.5,0:17:0:-49.51:49.51\n10\t35610837\t537317:1\tT\t]Un_JTFH01000337v1_decoy:2001]T\t42\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=537317:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_35598501_35623501_83C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:14:14:3.9:42.9,3.9,0:14:0:-42.91:42.91\n10\t35859514\t537512:1\tA\t[10:36013231[A\t52\tPASS\tDISC_MAPQ=30;EVDNC=DSCRD;IMPRECISE;MAPQ=30;MATEID=537512:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=10:35859514(-)-10:36013231(-)__10_35990501_36015501D;SPAN=153717;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:18:0:4.8:52.8,4.8,0:0:18:-52.81:52.81\n10\t35930733\t537494:1\tG\tG[10:35932139[\t51\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=537494:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_35917001_35942001_35C;SPAN=1406;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:18:28:18.5:51.5,0,18.5:18:0:-52.37:52.37\n10\t35932139\t537494:2\tT\t]10:35930733]T\t51\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=537494:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_35917001_35942001_35C;SPAN=1406;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:18:28:18.5:51.5,0,18.5:18:0:-52.37:52.37\n10\t36013231\t537512:2\tT\t[10:35859514[T\t52\tPASS\tDISC_MAPQ=32;EVDNC=DSCRD;IMPRECISE;MAPQ=32;MATEID=537512:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=10:35859514(-)-10:36013231(-)__10_35990501_36015501D;SPAN=153717;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:18:0:4.8:52.8,4.8,0:0:18:-52.81:52.81\n10\t38527620\t539220:1\tA\tA[10:38529793[\t0\tPASS\tEVDNC=ASSMB;HOMSEQ=AATGGAATGGAATGGAATGGA;MAPQ=60;MATEID=539220:2;MATENM=3;NM=1;NUMPARTS=3;SCTG=c_10_38514001_38539001_669C;SPAN=2173;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/0:14:485:89.7:0,89.7,1400:14:0:90.12:19.18\n10\t38529793\t539220:2\tA\t]10:38527620]A\t0\tPASS\tEVDNC=ASSMB;HOMSEQ=AATGGAATGGAATGGAATGGA;MAPQ=60;MATEID=539220:1;MATENM=1;NM=3;NUMPARTS=3;SCTG=c_10_38514001_38539001_669C;SPAN=2173;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/0:14:485:89.7:0,89.7,1400:14:0:90.12:19.18\n10\t38950967\t541640:2\tT\tT]7:65499251]\t27\tPASS\tDISC_MAPQ=21;EVDNC=DSCRD;IMPRECISE;MAPQ=21;MATEID=541640:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:65499251(+)-10:38950967(+)__10_38930501_38955501D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:33:27.2:27.2,0,53.6:0:11:-27.04:27.59\n10\t39173961\t541890:1\tA\tA[10:39175116[\t92\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TTTCTGAGAAACTGCTTTGTGATGTGAGCATTCATCTCACAGA;MAPQ=60;MATEID=541890:2;MATENM=3;NM=0;NUMPARTS=2;SCTG=c_10_39151001_39176001_60C;SPAN=1155;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:30:30:8.4:92.4,8.4,0:17:16:-92.42:92.42\n10\t39175116\t541890:2\tT\t]10:39173961]T\t92\tPASS\tDISC_MAPQ=55;EVDNC=ASDIS;HOMSEQ=TTTCTGAGAAACTGCTTTGTGATGTGAGCATTCATCTCACAGA;MAPQ=60;MATEID=541890:1;MATENM=0;NM=3;NUMPARTS=2;SCTG=c_10_39151001_39176001_60C;SPAN=1155;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:30:30:8.4:92.4,8.4,0:17:16:-92.42:92.42\n10\t39347363\t542023:1\tA\tA[10:39347685[\t85\tPASS\tEVDNC=ASSMB;HOMSEQ=AAATATCCCTTTGCAGATTCTA;MAPQ=60;MATEID=542023:2;MATENM=1;NM=2;NUMPARTS=2;SCTG=c_10_39322501_39347501_49C;SPAN=322;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:28:10:7.8:85.8,7.8,0:28:0:-85.82:85.82\n10\t39347685\t542023:2\tA\t]10:39347363]A\t85\tPASS\tEVDNC=ASSMB;HOMSEQ=AAATATCCCTTTGCAGATTCTA;MAPQ=60;MATEID=542023:1;MATENM=2;NM=1;NUMPARTS=2;SCTG=c_10_39322501_39347501_49C;SPAN=322;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:28:10:7.8:85.8,7.8,0:28:0:-85.82:85.82\n10\t39406263\t542069:1\tT\tT[10:39413843[\t84\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TGAGAAACTTCTTTGTGATGTGTGCTTTCATCTCACAGAGTTGAATCTTTCTTTTGATT;MAPQ=60;MATEID=542069:2;MATENM=3;NM=2;NUMPARTS=2;SCTG=c_10_39396001_39421001_58C;SPAN=7580;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:29:39:12.2:84.8,0,12.2:13:17:-87.73:87.73\n10\t39413843\t542069:2\tT\t]10:39406263]T\t84\tPASS\tDISC_MAPQ=59;EVDNC=ASDIS;HOMSEQ=TGAGAAACTTCTTTGTGATGTGTGCTTTCATCTCACAGAGTTGAATCTTTCTTTTGATT;MAPQ=60;MATEID=542069:1;MATENM=2;NM=3;NUMPARTS=2;SCTG=c_10_39396001_39421001_58C;SPAN=7580;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:29:39:12.2:84.8,0,12.2:13:17:-87.73:87.73\n10\t39454303\t542169:1\tC\tC[10:39454773[\t73\tPASS\tDISC_MAPQ=60;EVDNC=TSI_L;HOMSEQ=TTCTGAGAATGCTTCTGTGTAGTTTTTATGTGAAGATATTTCCTTTTC;MAPQ=59;MATEID=542169:2;MATENM=8;NM=1;NUMPARTS=3;SCTG=c_10_39445001_39470001_61C;SPAN=470;SUBN=1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:25:33:7.4:73.4,0,7.4:19:6:-76.04:76.04\n10\t39454773\t542169:2\tT\t]10:39454303]T\t73\tPASS\tDISC_MAPQ=20;EVDNC=TSI_L;HOMSEQ=TTCTGAGAATGCTTCTGTGTAGTTTTTATGTGAAGATATTTCCTTTTC;MAPQ=21;MATEID=542169:1;MATENM=1;NM=8;NUMPARTS=3;SCTG=c_10_39445001_39470001_61C;SPAN=470;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:25:33:7.4:73.4,0,7.4:19:6:-76.04:76.04\n10\t39496326\t869771:1\tC\t]20:28835228]C\t22\tPASS\tDISC_MAPQ=15;EVDNC=DSCRD;IMPRECISE;MAPQ=15;MATEID=869771:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=10:39496326(-)-20:28835228(+)__20_28812001_28837001D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:50:22.4:22.4,0,101.6:0:11:-22.26:25.25\n10\t39517954\t542365:1\tG\tG[10:39523152[\t17\tPASS\tDISC_MAPQ=55;EVDNC=DSCRD;IMPRECISE;MAPQ=55;MATEID=542365:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=10:39517954(+)-10:39523152(-)__10_39518501_39543501D;SPAN=5198;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:31:17.9:17.9,0,57.5:0:8:-17.69:19\n10\t39523152\t542365:2\tT\t]10:39517954]T\t17\tPASS\tDISC_MAPQ=54;EVDNC=DSCRD;IMPRECISE;MAPQ=54;MATEID=542365:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=10:39517954(+)-10:39523152(-)__10_39518501_39543501D;SPAN=5198;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:31:17.9:17.9,0,57.5:0:8:-17.69:19\n10\t39561377\t543316:1\tT\t]10:41708970]T\t19\tPASS\tDISC_MAPQ=33;EVDNC=DSCRD;IMPRECISE;MAPQ=33;MATEID=543316:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=10:39561377(-)-10:41708970(+)__10_41699001_41724001D;SPAN=2147593;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:24:19.7:19.7,0,39.5:0:8:-19.66:20.07\n10\t39561422\t542533:1\tC\t]10:39900386]C\t36\tPASS\tDISC_MAPQ=49;EVDNC=DSCRD;IMPRECISE;MAPQ=49;MATEID=542533:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=10:39561422(-)-10:39900386(+)__10_39886001_39911001D;SPAN=338964;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:12:3:3.3:36.3,3.3,0:0:12:-36.31:36.31\n10\t39570652\t543048:1\tT\tT[10:41469918[\t46\tPASS\tDISC_MAPQ=3;EVDNC=ASDIS;HOMSEQ=TAGACAGAAGAAT;MAPQ=53;MATEID=543048:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_10_41454001_41479001_291C;SPAN=1899266;SUBN=1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:15:7:4.2:46.2,4.2,0:10:9:-46.21:46.21\n10\t39575131\t542465:1\tC\tC[10:39576801[\t30\tPASS\tDISC_MAPQ=21;EVDNC=DSCRD;IMPRECISE;MAPQ=21;MATEID=542465:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=10:39575131(+)-10:39576801(-)__10_39567501_39592501D;SPAN=1670;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:25:185:30.7:30.7,0,433.4:0:25:-30.52:51.53\n10\t39576801\t542465:2\tA\t]10:39575131]A\t30\tPASS\tDISC_MAPQ=20;EVDNC=DSCRD;IMPRECISE;MAPQ=20;MATEID=542465:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=10:39575131(+)-10:39576801(-)__10_39567501_39592501D;SPAN=1670;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:25:185:30.7:30.7,0,433.4:0:25:-30.52:51.53\n10\t39580940\t542869:1\tT\tT[10:41034331[\t59\tPASS\tDISC_MAPQ=29;EVDNC=DSCRD;IMPRECISE;MAPQ=29;MATEID=542869:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=10:39580940(+)-10:41034331(-)__10_41013001_41038001D;SPAN=1453391;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:20:4:5.4:59.4,5.4,0:0:20:-59.41:59.41\n10\t39758629\t542522:1\tG\tG[10:39844905[\t27\tPASS\tDISC_MAPQ=25;EVDNC=DSCRD;IMPRECISE;MAPQ=25;MATEID=542522:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=10:39758629(+)-10:39844905(-)__10_39837001_39862001D;SPAN=86276;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:32:27.5:27.5,0,50.6:0:11:-27.32:27.77\n10\t39844905\t542522:2\tT\t]10:39758629]T\t27\tPASS\tDISC_MAPQ=17;EVDNC=DSCRD;IMPRECISE;MAPQ=17;MATEID=542522:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=10:39758629(+)-10:39844905(-)__10_39837001_39862001D;SPAN=86276;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:32:27.5:27.5,0,50.6:0:11:-27.32:27.77\n10\t39900386\t542533:2\tA\tA[10:39561422[\t36\tPASS\tDISC_MAPQ=44;EVDNC=DSCRD;IMPRECISE;MAPQ=44;MATEID=542533:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=10:39561422(-)-10:39900386(+)__10_39886001_39911001D;SPAN=338964;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:12:3:3.3:36.3,3.3,0:0:12:-36.31:36.31\n10\t39940223\t542923:1\tC\t]10:41121404]C\t26\tPASS\tDISC_MAPQ=26;EVDNC=DSCRD;IMPRECISE;MAPQ=26;MATEID=542923:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=10:39940223(-)-10:41121404(+)__10_41111001_41136001D;SPAN=1181181;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:8:9:2.4:26.4,2.4,0:0:8:-25.7:25.7\n10\t39944712\t542980:1\tT\tT[10:41274581[\t99\tPASS\tDISC_MAPQ=41;EVDNC=ASDIS;HOMSEQ=CTAGACAGAAGAATTCTCAGTAACTTCTTTGTGTTGTGTGTATTCAACTCACAGATTTGAACCTT;MAPQ=60;MATEID=542980:2;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_10_41258001_41283001_111C;SPAN=1329869;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:34:3:9.3:102.3,9.3,0:11:25:-102.3:102.3\n10\t39956209\t542664:1\tC\tC[10:40398600[\t24\tPASS\tDISC_MAPQ=37;EVDNC=DSCRD;IMPRECISE;MAPQ=37;MATEID=542664:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=10:39956209(+)-10:40398600(-)__10_40376001_40401001D;SPAN=442391;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:54:24.5:24.5,0,110.3:0:12:-24.43:27.6\n10\t40398600\t542664:2\tT\t]10:39956209]T\t24\tPASS\tDISC_MAPQ=35;EVDNC=DSCRD;IMPRECISE;MAPQ=35;MATEID=542664:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=10:39956209(+)-10:40398600(-)__10_40376001_40401001D;SPAN=442391;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:54:24.5:24.5,0,110.3:0:12:-24.43:27.6\n10\t40616286\t542749:1\tG\tG[10:41514088[\t36\tPASS\tDISC_MAPQ=35;EVDNC=DSCRD;IMPRECISE;MAPQ=35;MATEID=542749:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=10:40616286(+)-10:41514088(-)__10_40596501_40621501D;SPAN=897802;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:12:12:3.3:36.3,3.3,0:0:12:-36.31:36.31\n10\t41034331\t542869:2\tG\t]10:39580940]G\t59\tPASS\tDISC_MAPQ=39;EVDNC=DSCRD;IMPRECISE;MAPQ=39;MATEID=542869:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=10:39580940(+)-10:41034331(-)__10_41013001_41038001D;SPAN=1453391;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:20:4:5.4:59.4,5.4,0:0:20:-59.41:59.41\n10\t41121404\t542923:2\tG\tG[10:39940223[\t26\tPASS\tDISC_MAPQ=25;EVDNC=DSCRD;IMPRECISE;MAPQ=25;MATEID=542923:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=10:39940223(-)-10:41121404(+)__10_41111001_41136001D;SPAN=1181181;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:8:9:2.4:26.4,2.4,0:0:8:-25.7:25.7\n10\t41274581\t542980:2\tC\t]10:39944712]C\t99\tPASS\tDISC_MAPQ=30;EVDNC=ASDIS;HOMSEQ=CTAGACAGAAGAATTCTCAGTAACTTCTTTGTGTTGTGTGTATTCAACTCACAGATTTGAACCTT;MAPQ=60;MATEID=542980:1;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_10_41258001_41283001_111C;SPAN=1329869;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:34:3:9.3:102.3,9.3,0:11:25:-102.3:102.3\n10\t41275126\t543061:1\tT\tT[10:41461934[\t39\tPASS\tDISC_MAPQ=41;EVDNC=DSCRD;IMPRECISE;MAPQ=41;MATEID=543061:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=10:41275126(+)-10:41461934(-)__10_41454001_41479001D;SPAN=186808;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:13:16:0.9:39.6,0.9,0:0:13:-40.41:40.41\n10\t41310093\t543068:1\tC\tC[10:41481615[\t46\tPASS\tDISC_MAPQ=20;EVDNC=ASDIS;HOMSEQ=ATGGAAATATCTTCGTGTAAAAACTACACAGAATCATTC;MAPQ=60;MATEID=543068:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_41478501_41503501_170C;SPAN=171522;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:16:10:4.2:46.2,4.2,0:5:13:-46.21:46.21\n10\t41461934\t543061:2\tG\t]10:41275126]G\t39\tPASS\tDISC_MAPQ=18;EVDNC=DSCRD;IMPRECISE;MAPQ=18;MATEID=543061:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=10:41275126(+)-10:41461934(-)__10_41454001_41479001D;SPAN=186808;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:13:16:0.9:39.6,0.9,0:0:13:-40.41:40.41\n10\t41469918\t543048:2\tT\t]10:39570652]T\t46\tPASS\tDISC_MAPQ=33;EVDNC=ASDIS;HOMSEQ=TAGACAGAAGAAT;MAPQ=53;MATEID=543048:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_10_41454001_41479001_291C;SPAN=1899266;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:15:7:4.2:46.2,4.2,0:10:9:-46.21:46.21\n10\t41481615\t543068:2\tA\t]10:41310093]A\t46\tPASS\tDISC_MAPQ=32;EVDNC=ASDIS;HOMSEQ=ATGGAAATATCTTCGTGTAAAAACTACACAGAATCATTC;MAPQ=60;MATEID=543068:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_41478501_41503501_170C;SPAN=171522;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:16:10:4.2:46.2,4.2,0:5:13:-46.21:46.21\n10\t41498909\t543111:1\tT\tT[10:41531348[\t9\tPASS\tDISC_MAPQ=25;EVDNC=DSCRD;IMPRECISE;MAPQ=25;MATEID=543111:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=10:41498909(+)-10:41531348(-)__10_41527501_41552501D;SPAN=32439;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:59:9.8:9.8,0,138.5:0:8:-9.824:16.5\n10\t41514088\t542749:2\tG\t]10:40616286]G\t36\tPASS\tDISC_MAPQ=49;EVDNC=DSCRD;IMPRECISE;MAPQ=49;MATEID=542749:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=10:40616286(+)-10:41514088(-)__10_40596501_40621501D;SPAN=897802;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:12:12:3.3:36.3,3.3,0:0:12:-36.31:36.31\n10\t41531348\t543111:2\tA\t]10:41498909]A\t9\tPASS\tDISC_MAPQ=41;EVDNC=DSCRD;IMPRECISE;MAPQ=41;MATEID=543111:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=10:41498909(+)-10:41531348(-)__10_41527501_41552501D;SPAN=32439;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:59:9.8:9.8,0,138.5:0:8:-9.824:16.5\n10\t41550926\t543141:1\tC\tC[10:41582440[\t36\tPASS\tDISC_MAPQ=17;EVDNC=DSCRD;IMPRECISE;MAPQ=17;MATEID=543141:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=10:41550926(+)-10:41582440(-)__10_41527501_41552501D;SPAN=31514;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:11:12:3.3:36.3,3.3,0:0:11:-35.86:35.86\n10\t41578760\t543295:1\tT\t]10:41580449]T\t32\tPASS\tDISC_MAPQ=28;EVDNC=DSCRD;IMPRECISE;MAPQ=28;MATEID=543295:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=10:41578760(-)-10:41580449(+)__10_41576501_41601501D;SPAN=1689;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:48:32.9:32.9,0,85.7:0:14:-32.72:34.13\n10\t41580449\t543295:2\tG\tG[10:41578760[\t32\tPASS\tDISC_MAPQ=38;EVDNC=DSCRD;IMPRECISE;MAPQ=38;MATEID=543295:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=10:41578760(-)-10:41580449(+)__10_41576501_41601501D;SPAN=1689;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:48:32.9:32.9,0,85.7:0:14:-32.72:34.13\n10\t41582440\t543141:2\tG\t]10:41550926]G\t36\tPASS\tDISC_MAPQ=42;EVDNC=DSCRD;IMPRECISE;MAPQ=42;MATEID=543141:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=10:41550926(+)-10:41582440(-)__10_41527501_41552501D;SPAN=31514;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:11:12:3.3:36.3,3.3,0:0:11:-35.86:35.86\n10\t41708970\t543316:2\tA\tA[10:39561377[\t19\tPASS\tDISC_MAPQ=18;EVDNC=DSCRD;IMPRECISE;MAPQ=18;MATEID=543316:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=10:39561377(-)-10:41708970(+)__10_41699001_41724001D;SPAN=2147593;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:24:19.7:19.7,0,39.5:0:8:-19.66:20.07\n10\t42100210\t543677:1\tA\tA[10:42100795[\t86\tPASS\tDISC_MAPQ=34;EVDNC=ASDIS;HOMSEQ=GAATGGACTCGAATGGA;MAPQ=60;MATEID=543677:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_42091001_42116001_352C;SPAN=585;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:30:45:26.9:86.3,0,26.9:26:5:-88.1:88.1\n10\t42100795\t543677:2\tG\t]10:42100210]G\t86\tPASS\tDISC_MAPQ=48;EVDNC=ASDIS;HOMSEQ=GAATGGACTCGAATGGA;MAPQ=60;MATEID=543677:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_42091001_42116001_352C;SPAN=585;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:30:45:26.9:86.3,0,26.9:26:5:-88.1:88.1\n10\t42102314\t543686:1\tG\t]10:42103670]G\t0\tPASS\tDISC_MAPQ=22;EVDNC=DSCRD;IMPRECISE;MAPQ=22;MATEID=543686:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=10:42102314(-)-10:42103670(+)__10_42091001_42116001D;SPAN=1356;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/0:8:102:2.1:0,2.1,260.7:0:8:2.263:14.5\n10\t42103670\t543686:2\tA\tA[10:42102314[\t0\tPASS\tDISC_MAPQ=43;EVDNC=DSCRD;IMPRECISE;MAPQ=43;MATEID=543686:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=10:42102314(-)-10:42103670(+)__10_42091001_42116001D;SPAN=1356;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/0:8:102:2.1:0,2.1,260.7:0:8:2.263:14.5\n10\t43261053\t544893:1\tC\t]10:43394966]C\t10\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=CG;MAPQ=60;MATEID=544893:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_43389501_43414501_79C;SPAN=133913;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:5:21:10.7:10.7,0,40.4:2:5:-10.6:11.67\n10\t43394966\t544893:2\tG\tG[10:43261053[\t10\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=CG;MAPQ=60;MATEID=544893:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_43389501_43414501_79C;SPAN=133913;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:5:21:10.7:10.7,0,40.4:2:5:-10.6:11.67\n10\t44405861\t545285:1\tG\tG[10:44406159[\t85\tPASS\tDISC_MAPQ=56;EVDNC=ASDIS;HOMSEQ=CATGTATGTTT;MAPQ=60;MATEID=545285:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_10_44394001_44419001_86C;SPAN=298;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:28:10:7.8:85.8,7.8,0:19:10:-85.82:85.82\n10\t44406159\t545285:2\tA\t]10:44405861]A\t85\tPASS\tDISC_MAPQ=58;EVDNC=ASDIS;HOMSEQ=CATGTATGTTT;MAPQ=60;MATEID=545285:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_10_44394001_44419001_86C;SPAN=298;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:28:10:7.8:85.8,7.8,0:19:10:-85.82:85.82\n10\t44927494\t545384:1\tC\t]10:44928688]C\t53\tPASS\tEVDNC=ASSMB;HOMSEQ=CA;MAPQ=60;MATEID=545384:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_44908501_44933501_69C;SPAN=1194;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:20:44:53.6:53.6,0,56.9:20:0:-53.65:53.66\n10\t44927779\t545385:1\tT\tT[10:44928703[\t24\tPASS\tEVDNC=ASSMB;INSERTION=AGTCA;MAPQ=60;MATEID=545385:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_10_44908501_44933501_67C;SPAN=924;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:41:24.8:24.8,0,77.6:11:0:-24.79:26.34\n10\t44928688\t545384:2\tA\tA[10:44927494[\t53\tPASS\tEVDNC=ASSMB;HOMSEQ=CA;MAPQ=60;MATEID=545384:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_44908501_44933501_69C;SPAN=1194;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:20:44:53.6:53.6,0,56.9:20:0:-53.65:53.66\n10\t44928703\t545385:2\tC\t]10:44927779]C\t24\tPASS\tEVDNC=ASSMB;INSERTION=AGTCA;MAPQ=60;MATEID=545385:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_10_44908501_44933501_67C;SPAN=924;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:41:24.8:24.8,0,77.6:11:0:-24.79:26.34\n10\t46106667\t545817:1\tA\t]10:46283237]A\t72\tPASS\tDISC_MAPQ=57;EVDNC=DSCRD;IMPRECISE;MAPQ=57;MATEID=545817:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=10:46106667(-)-10:46283237(+)__10_46280501_46305501D;SPAN=176570;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:24:4:6.6:72.6,6.6,0:0:24:-72.62:72.62\n10\t46283237\t545817:2\tC\tC[10:46106667[\t72\tPASS\tDISC_MAPQ=52;EVDNC=DSCRD;IMPRECISE;MAPQ=52;MATEID=545817:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=10:46106667(-)-10:46283237(+)__10_46280501_46305501D;SPAN=176570;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:24:4:6.6:72.6,6.6,0:0:24:-72.62:72.62\n10\t49470491\t546800:1\tT\t]10:49497474]T\t23\tPASS\tEVDNC=ASSMB;INSERTION=CACA;MAPQ=60;MATEID=546800:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_49490001_49515001_5C;SPAN=26983;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:21:23.9:23.9,0,27.2:9:0:-23.81:23.84\n10\t49497474\t546800:2\tT\tT[10:49470491[\t23\tPASS\tEVDNC=ASSMB;INSERTION=CACA;MAPQ=60;MATEID=546800:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_49490001_49515001_5C;SPAN=26983;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:21:23.9:23.9,0,27.2:9:0:-23.81:23.84\n10\t49795424\t546900:1\tT\tT[10:49803011[\t30\tPASS\tDISC_MAPQ=53;EVDNC=DSCRD;IMPRECISE;MAPQ=53;MATEID=546900:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=10:49795424(+)-10:49803011(-)__10_49784001_49809001D;SPAN=7587;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:21:20.6:30.5,0,20.6:0:11:-30.47:30.47\n10\t49803011\t546900:2\tA\t]10:49795424]A\t30\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=546900:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=10:49795424(+)-10:49803011(-)__10_49784001_49809001D;SPAN=7587;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:21:20.6:30.5,0,20.6:0:11:-30.47:30.47\n10\t50043661\t546988:1\tG\t[10:50135654[G\t18\tPASS\tDISC_MAPQ=55;EVDNC=DSCRD;IMPRECISE;MAPQ=55;MATEID=546988:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=10:50043661(-)-10:50135654(-)__10_50029001_50054001D;SPAN=91993;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:29:18.2:18.2,0,54.5:0:8:-18.26:19.27\n10\t50135654\t546988:2\tT\t[10:50043661[T\t18\tPASS\tDISC_MAPQ=21;EVDNC=DSCRD;IMPRECISE;MAPQ=21;MATEID=546988:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=10:50043661(-)-10:50135654(-)__10_50029001_50054001D;SPAN=91993;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:29:18.2:18.2,0,54.5:0:8:-18.26:19.27\n10\t50149982\t547039:1\tG\tG[10:50151355[\t99\tPASS\tDISC_MAPQ=21;EVDNC=DSCRD;IMPRECISE;MAPQ=21;MATEID=547039:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=10:50149982(+)-10:50151355(-)__10_50151501_50176501D;SPAN=1373;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:34:0:9.3:102.3,9.3,0:0:34:-102.3:102.3\n10\t50151355\t547039:2\tC\t]10:50149982]C\t99\tPASS\tDISC_MAPQ=38;EVDNC=DSCRD;IMPRECISE;MAPQ=38;MATEID=547039:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=10:50149982(+)-10:50151355(-)__10_50151501_50176501D;SPAN=1373;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:34:0:9.3:102.3,9.3,0:0:34:-102.3:102.3\n10\t51132282\t547341:1\tC\t]10:51156594]C\t24\tPASS\tEVDNC=ASSMB;INSERTION=AATTTCT;MAPQ=60;MATEID=547341:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_10_51156001_51181001_2C;SPAN=24312;SUBN=1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:32:24.2:24.2,0,53.9:10:0:-24.02:24.74\n10\t51156594\t547341:2\tT\tT[10:51132282[\t24\tPASS\tEVDNC=ASSMB;INSERTION=AATTTCT;MAPQ=60;MATEID=547341:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_10_51156001_51181001_2C;SPAN=24312;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:32:24.2:24.2,0,53.9:10:0:-24.02:24.74\n10\t51384972\t547381:1\tA\tA[10:51385914[\t36\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;INSERTION=GG;MAPQ=60;MATEID=547381:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_51376501_51401501_2C;SPAN=942;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:36:36.2:36.2,0,52.7:11:6:-36.1:36.3\n10\t51385914\t547381:2\tT\t]10:51384972]T\t36\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;INSERTION=GG;MAPQ=60;MATEID=547381:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_51376501_51401501_2C;SPAN=942;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:36:36.2:36.2,0,52.7:11:6:-36.1:36.3\n10\t53023898\t547993:1\tC\tC[10:53029069[\t99\tPASS\tDISC_MAPQ=58;EVDNC=DSCRD;IMPRECISE;MAPQ=58;MATEID=547993:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=10:53023898(+)-10:53029069(-)__10_53018001_53043001D;SPAN=5171;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:38:9:10.5:115.5,10.5,0:0:38:-115.5:115.5\n10\t53029069\t547993:2\tC\t]10:53023898]C\t99\tPASS\tDISC_MAPQ=54;EVDNC=DSCRD;IMPRECISE;MAPQ=54;MATEID=547993:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=10:53023898(+)-10:53029069(-)__10_53018001_53043001D;SPAN=5171;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:38:9:10.5:115.5,10.5,0:0:38:-115.5:115.5\n10\t53101060\t548047:1\tC\tC[10:53101370[\t43\tPASS\tEVDNC=ASSMB;HOMSEQ=CCCGATTTTC;MAPQ=60;MATEID=548047:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_53091501_53116501_84C;SPAN=310;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:16:34:40.1:43.4,0,40.1:16:0:-43.26:43.26\n10\t53101370\t548047:2\tC\t]10:53101060]C\t43\tPASS\tEVDNC=ASSMB;HOMSEQ=CCCGATTTTC;MAPQ=60;MATEID=548047:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_53091501_53116501_84C;SPAN=310;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:16:34:40.1:43.4,0,40.1:16:0:-43.26:43.26\n10\t53220202\t548132:1\tA\tA]10:53221322]\t20\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=A;MAPQ=60;MATEID=548132:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_53214001_53239001_57C;SPAN=1120;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:44:20.6:20.6,0,89.9:5:6:-20.64:23.11\n10\t53221322\t548132:2\tT\tT]10:53220202]\t20\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=A;MAPQ=60;MATEID=548132:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_53214001_53239001_57C;SPAN=1120;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:44:20.6:20.6,0,89.9:5:6:-20.64:23.11\n10\t53531687\t575098:1\tG\t]11:8406229]G\t26\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=575098:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=10:53531687(-)-11:8406229(+)__11_8403501_8428501D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:9:8:2.4:26.4,2.4,0:0:9:-26.41:26.41\n10\t54686224\t548789:1\tT\t]10:54709840]T\t36\tPASS\tEVDNC=ASSMB;HOMSEQ=TT;MAPQ=60;MATEID=548789:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_54708501_54733501_50C;SPAN=23616;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:12:12:3.3:36.3,3.3,0:12:0:-36.31:36.31\n10\t54709840\t548789:2\tT\tT[10:54686224[\t36\tPASS\tEVDNC=ASSMB;HOMSEQ=TT;MAPQ=60;MATEID=548789:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_54708501_54733501_50C;SPAN=23616;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:12:12:3.3:36.3,3.3,0:12:0:-36.31:36.31\n10\t54757278\t548830:1\tT\tT[10:54757581[\t23\tPASS\tEVDNC=ASSMB;HOMSEQ=AATTCTACCTT;MAPQ=60;MATEID=548830:2;MATENM=1;NM=2;NUMPARTS=2;SCTG=c_10_54757501_54782501_28C;SPAN=303;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:11:3.5:23.3,0,3.5:8:0:-24.05:24.05\n10\t54757581\t548830:2\tA\t]10:54757278]A\t23\tPASS\tEVDNC=ASSMB;HOMSEQ=AATTCTACCTT;MAPQ=60;MATEID=548830:1;MATENM=2;NM=1;NUMPARTS=2;SCTG=c_10_54757501_54782501_28C;SPAN=303;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:11:3.5:23.3,0,3.5:8:0:-24.05:24.05\n10\t54923020\t548895:1\tC\tC[10:54924599[\t49\tPASS\tEVDNC=ASSMB;HOMSEQ=GC;MAPQ=60;MATEID=548895:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_54904501_54929501_54C;SPAN=1579;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:17:17:4.5:49.5,4.5,0:17:0:-49.51:49.51\n10\t54924599\t548895:2\tG\t]10:54923020]G\t49\tPASS\tEVDNC=ASSMB;HOMSEQ=GC;MAPQ=60;MATEID=548895:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_54904501_54929501_54C;SPAN=1579;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:17:17:4.5:49.5,4.5,0:17:0:-49.51:49.51\n10\t56786728\t988246:1\tT\t[Un_KN707707v1_decoy:1[T\t52\tPASS\tDISC_MAPQ=255;EVDNC=TSI_L;MAPQ=60;MATEID=988246:2;MATENM=0;NM=0;NUMPARTS=13;REPSEQ=AA;SCTG=c_558_1_4339_0C;SPAN=-1;SUBN=3;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:18:5:4.8:52.8,4.8,0:18:0:-52.81:52.81\n10\t57255466\t549907:1\tT\tT[10:57255800[\t13\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=ATCATTCTT;MAPQ=60;MATEID=549907:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_57232001_57257001_133C;SPAN=334;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:47:13.4:13.4,0,102.5:4:6:-13.2:17.36\n10\t57255800\t549907:2\tA\t]10:57255466]A\t13\tPASS\tDISC_MAPQ=58;EVDNC=ASDIS;HOMSEQ=ATCATTCTT;MAPQ=60;MATEID=549907:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_57232001_57257001_133C;SPAN=334;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:47:13.4:13.4,0,102.5:4:6:-13.2:17.36\n10\t57450027\t549945:1\tG\tG[10:57452094[\t47\tPASS\tEVDNC=ASSMB;INSERTION=GTTAAAGATCAATC;MAPQ=60;MATEID=549945:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_57428001_57453001_8C;SPAN=2067;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:16:21:4.1:47,0,4.1:16:0:-48.75:48.75\n10\t57452094\t549945:2\tT\t]10:57450027]T\t47\tPASS\tEVDNC=ASSMB;INSERTION=GTTAAAGATCAATC;MAPQ=60;MATEID=549945:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_57428001_57453001_8C;SPAN=2067;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:16:21:4.1:47,0,4.1:16:0:-48.75:48.75\n10\t57497185\t549966:1\tT\tT[10:57498224[\t92\tPASS\tDISC_MAPQ=255;EVDNC=TSI_G;HOMSEQ=ATT;INSERTION=CATTTCTTTTTTCTTATCATTTTTTTCTTTGTCAACTATTTGATGACATCTCCAAACATCACCTTTTATTCATGACAGGAGTAGGGTATCATAGTAAAGAACACTGTTAATATAATCCAGATCCTTCACCACCTTCTGAAATATAGAGGAGCTTTAAGACTATGTTTGTTTTTCCTTGTATTTGCAGAAATAGCATGAGCTTTGTTTAAAGTCAGGCATCTAAAACCTTGCCCTGTATGTATTGACAAACTACACAAAATTTGTGATCTAT;MAPQ=60;MATEID=549966:2;MATENM=2;NM=0;NUMPARTS=3;SCTG=c_10_57477001_57502001_26C;SPAN=1039;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:31:18:8.4:92.4,8.4,0:31:0:-92.42:92.42\n10\t57497238\t549967:1\tG\tG]10:57498228]\t49\tPASS\tDISC_MAPQ=30;EVDNC=DSCRD;IMPRECISE;MAPQ=30;MATEID=549967:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=10:57497238(+)-10:57498228(+)__10_57477001_57502001D;SPAN=990;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:17:15:4.5:49.5,4.5,0:0:17:-49.51:49.51\n10\t57497899\t549968:1\tA\t[10:57498224[A\t49\tPASS\tDISC_MAPQ=255;EVDNC=TSI_L;HOMSEQ=ATT;MAPQ=60;MATEID=549968:2;MATENM=2;NM=3;NUMPARTS=3;REPSEQ=TT;SCTG=c_10_57477001_57502001_26C;SPAN=325;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:17:24:9.8:49.4,0,9.8:17:0:-50.74:50.74\n10\t57498224\t549968:2\tA\t[10:57497899[A\t49\tPASS\tDISC_MAPQ=255;EVDNC=TSI_L;HOMSEQ=ATT;MAPQ=60;MATEID=549968:1;MATENM=3;NM=2;NUMPARTS=3;REPSEQ=TT;SCTG=c_10_57477001_57502001_26C;SPAN=325;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:17:24:9.8:49.4,0,9.8:17:0:-50.74:50.74\n10\t57498224\t549966:2\tA\t]10:57497185]A\t92\tPASS\tDISC_MAPQ=255;EVDNC=TSI_G;HOMSEQ=ATT;INSERTION=CATTTCTTTTTTCTTATCATTTTTTTCTTTGTCAACTATTTGATGACATCTCCAAACATCACCTTTTATTCATGACAGGAGTAGGGTATCATAGTAAAGAACACTGTTAATATAATCCAGATCCTTCACCACCTTCTGAAATATAGAGGAGCTTTAAGACTATGTTTGTTTTTCCTTGTATTTGCAGAAATAGCATGAGCTTTGTTTAAAGTCAGGCATCTAAAACCTTGCCCTGTATGTATTGACAAACTACACAAAATTTGTGATCTAT;MAPQ=60;MATEID=549966:1;MATENM=0;NM=2;NUMPARTS=3;SCTG=c_10_57477001_57502001_26C;SPAN=1039;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:31:18:8.4:92.4,8.4,0:31:0:-92.42:92.42\n10\t57498228\t549967:2\tT\tT]10:57497238]\t49\tPASS\tDISC_MAPQ=58;EVDNC=DSCRD;IMPRECISE;MAPQ=58;MATEID=549967:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=10:57497238(+)-10:57498228(+)__10_57477001_57502001D;SPAN=990;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:17:15:4.5:49.5,4.5,0:0:17:-49.51:49.51\n10\t61983869\t551468:1\tT\tT[10:61984034[\t28\tPASS\tEVDNC=ASSMB;HOMSEQ=CCCCTTTTGTTCTT;MAPQ=60;MATEID=551468:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_61960501_61985501_50C;SPAN=165;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:28:28.4:28.4,0,41.6:11:0:-28.44:28.58\n10\t61984034\t551468:2\tC\t]10:61983869]C\t28\tPASS\tEVDNC=ASSMB;HOMSEQ=CCCCTTTTGTTCTT;MAPQ=60;MATEID=551468:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_61960501_61985501_50C;SPAN=165;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:28:28.4:28.4,0,41.6:11:0:-28.44:28.58\n10\t62238624\t551625:1\tT\t]10:62396244]T\t33\tPASS\tEVDNC=ASSMB;HOMSEQ=TG;MAPQ=60;MATEID=551625:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_62377001_62402001_11C;SPAN=157620;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:11:13:0.3:33,0.3,0:11:0:-34.67:34.67\n10\t62396244\t551625:2\tG\tG[10:62238624[\t33\tPASS\tEVDNC=ASSMB;HOMSEQ=TG;MAPQ=60;MATEID=551625:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_62377001_62402001_11C;SPAN=157620;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:11:13:0.3:33,0.3,0:11:0:-34.67:34.67\n10\t64639017\t552403:1\tA\tA[10:64640988[\t32\tPASS\tEVDNC=ASSMB;HOMSEQ=GATA;MAPQ=60;MATEID=552403:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_64631001_64656001_38C;SPAN=1971;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:25:29.3:32.6,0,29.3:12:0:-32.59:32.59\n10\t64640988\t552403:2\tG\t]10:64639017]G\t32\tPASS\tEVDNC=ASSMB;HOMSEQ=GATA;MAPQ=60;MATEID=552403:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_64631001_64656001_38C;SPAN=1971;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:25:29.3:32.6,0,29.3:12:0:-32.59:32.59\n10\t68482435\t554180:1\tA\t]10:69420212]A\t21\tPASS\tEVDNC=ASSMB;HOMSEQ=AT;MAPQ=60;MATEID=554180:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_69408501_69433501_55C;SPAN=937777;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:17:18.5:21.8,0,18.5:8:0:-21.63:21.63\n10\t68512353\t553754:1\tA\tA[10:68512662[\t33\tPASS\tEVDNC=ASSMB;HOMSEQ=AAAGATAAATGATA;MAPQ=60;MATEID=553754:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_68502001_68527001_136C;SPAN=309;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:21:17.3:33.8,0,17.3:12:0:-33.92:33.92\n10\t68512662\t553754:2\tA\t]10:68512353]A\t33\tPASS\tEVDNC=ASSMB;HOMSEQ=AAAGATAAATGATA;MAPQ=60;MATEID=553754:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_68502001_68527001_136C;SPAN=309;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:21:17.3:33.8,0,17.3:12:0:-33.92:33.92\n10\t69026605\t553996:1\tC\tC[10:69027557[\t43\tPASS\tEVDNC=ASSMB;HOMSEQ=CCTCAGCCTCCCAAAGTGCTGGGATTACAGGC;MAPQ=60;MATEID=553996:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_10_69016501_69041501_87C;SPAN=952;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:15:23:13.4:43.1,0,13.4:15:0:-43.8:43.8\n10\t69027557\t553996:2\tC\t]10:69026605]C\t43\tPASS\tEVDNC=ASSMB;HOMSEQ=CCTCAGCCTCCCAAAGTGCTGGGATTACAGGC;MAPQ=60;MATEID=553996:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_10_69016501_69041501_87C;SPAN=952;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:15:23:13.4:43.1,0,13.4:15:0:-43.8:43.8\n10\t69238368\t554126:1\tC\tC[10:69238679[\t75\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=ACCAGGTATTTTC;MAPQ=60;MATEID=554126:2;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_10_69237001_69262001_24C;SPAN=311;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:24:27:4.2:75.9,4.2,0:15:10:-77.11:77.11\n10\t69238679\t554126:2\tA\t]10:69238368]A\t75\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=ACCAGGTATTTTC;MAPQ=60;MATEID=554126:1;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_10_69237001_69262001_24C;SPAN=311;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:24:27:4.2:75.9,4.2,0:15:10:-77.11:77.11\n10\t69420212\t554180:2\tT\tT[10:68482435[\t21\tPASS\tEVDNC=ASSMB;HOMSEQ=AT;MAPQ=60;MATEID=554180:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_69408501_69433501_55C;SPAN=937777;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:17:18.5:21.8,0,18.5:8:0:-21.63:21.63\n10\t72713928\t555235:1\tT\tT[10:72716457[\t29\tPASS\tEVDNC=ASSMB;INSERTION=CTTT;MAPQ=60;MATEID=555235:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_72716001_72741001_7C;SPAN=2529;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:9:10:2.7:29.7,2.7,0:9:0:-29.08:29.08\n10\t72716457\t555235:2\tT\t]10:72713928]T\t29\tPASS\tEVDNC=ASSMB;INSERTION=CTTT;MAPQ=60;MATEID=555235:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_72716001_72741001_7C;SPAN=2529;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:9:10:2.7:29.7,2.7,0:9:0:-29.08:29.08\n10\t73082850\t555296:1\tT\tT[10:73083075[\t23\tPASS\tEVDNC=ASSMB;INSERTION=C;MAPQ=60;MATEID=555296:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_73059001_73084001_2C;SPAN=225;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:34:23.6:23.6,0,59.9:10:0:-23.45:24.42\n10\t73083075\t555296:2\tT\t]10:73082850]T\t23\tPASS\tEVDNC=ASSMB;INSERTION=C;MAPQ=60;MATEID=555296:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_73059001_73084001_2C;SPAN=225;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:34:23.6:23.6,0,59.9:10:0:-23.45:24.42\n10\t76003922\t556020:1\tC\t]10:76080167]C\t27\tPASS\tEVDNC=ASSMB;HOMSEQ=CT;MAPQ=60;MATEID=556020:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_76072501_76097501_30C;SPAN=76245;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:20:20.9:27.5,0,20.9:10:0:-27.41:27.41\n10\t76080167\t556020:2\tT\tT[10:76003922[\t27\tPASS\tEVDNC=ASSMB;HOMSEQ=CT;MAPQ=60;MATEID=556020:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_76072501_76097501_30C;SPAN=76245;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:20:20.9:27.5,0,20.9:10:0:-27.41:27.41\n10\t76495938\t556119:1\tT\tT[10:76501261[\t75\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=556119:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=10:76495938(+)-10:76501261(-)__10_76489001_76514001D;SPAN=5323;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:25:7:6.9:75.9,6.9,0:0:25:-75.92:75.92\n10\t76501261\t556119:2\tA\t]10:76495938]A\t75\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=556119:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=10:76495938(+)-10:76501261(-)__10_76489001_76514001D;SPAN=5323;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:25:7:6.9:75.9,6.9,0:0:25:-75.92:75.92\n10\t76586965\t556162:1\tC\tC[10:76591819[\t99\tPASS\tDISC_MAPQ=59;EVDNC=DSCRD;IMPRECISE;MAPQ=59;MATEID=556162:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=10:76586965(+)-10:76591819(-)__10_76587001_76612001D;SPAN=4854;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:44:14:12.3:135.3,12.3,0:0:44:-135.3:135.3\n10\t76591819\t556162:2\tA\t]10:76586965]A\t99\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=556162:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=10:76586965(+)-10:76591819(-)__10_76587001_76612001D;SPAN=4854;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:44:14:12.3:135.3,12.3,0:0:44:-135.3:135.3\n10\t77573728\t556451:2\tG\tG]2:70434172]\t10\tPASS\tDISC_MAPQ=6;EVDNC=TSI_L;HOMSEQ=ATAGAATAGAATAGAATAG;INSERTION=C;MAPQ=11;MATEID=556451:1;MATENM=0;NM=0;NUMPARTS=3;REPSEQ=AGATAAGATAAGATAAGATAAGATAAGATAAGATAAGATAAGATAAGATA;SCTG=c_10_77567001_77592001_32C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:19:3.4:10.3,0,3.4:2:9:-10.19:10.19\n10\t79332425\t556796:1\tT\tT[10:79333024[\t85\tPASS\tEVDNC=ASSMB;INSERTION=TTCTTCTCAATATAATGTCT;MAPQ=60;MATEID=556796:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_79331001_79356001_10C;SPAN=599;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:28:26:7.8:85.8,7.8,0:28:0:-85.82:85.82\n10\t79333024\t556796:2\tG\t]10:79332425]G\t85\tPASS\tEVDNC=ASSMB;INSERTION=TTCTTCTCAATATAATGTCT;MAPQ=60;MATEID=556796:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_79331001_79356001_10C;SPAN=599;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:28:26:7.8:85.8,7.8,0:28:0:-85.82:85.82\n10\t80977995\t557187:1\tT\tT[10:80978301[\t38\tPASS\tEVDNC=ASSMB;HOMSEQ=GGTGCTTTCTCTTT;MAPQ=60;MATEID=557187:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_10_80972501_80997501_67C;SPAN=306;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:26:25.7:38.9,0,25.7:14:0:-39.03:39.03\n10\t80978301\t557187:2\tG\t]10:80977995]G\t38\tPASS\tEVDNC=ASSMB;HOMSEQ=GGTGCTTTCTCTTT;MAPQ=60;MATEID=557187:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_10_80972501_80997501_67C;SPAN=306;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:26:25.7:38.9,0,25.7:14:0:-39.03:39.03\n10\t80990542\t557201:1\tG\tG[10:80992894[\t92\tPASS\tEVDNC=ASSMB;HOMSEQ=TG;MAPQ=60;MATEID=557201:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_80972501_80997501_16C;SPAN=2352;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:30:29:8.4:92.4,8.4,0:30:0:-92.42:92.42\n10\t80992894\t557201:2\tT\t]10:80990542]T\t92\tPASS\tEVDNC=ASSMB;HOMSEQ=TG;MAPQ=60;MATEID=557201:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_80972501_80997501_16C;SPAN=2352;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:30:29:8.4:92.4,8.4,0:30:0:-92.42:92.42\n10\t81144901\t557229:1\tG\tG[10:81145155[\t22\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=557229:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_10_81144001_81169001_16C;SPAN=254;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:16:15.5:22.1,0,15.5:8:0:-21.93:21.93\n10\t81145155\t557229:2\tT\t]10:81144901]T\t22\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=557229:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_10_81144001_81169001_16C;SPAN=254;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:16:15.5:22.1,0,15.5:8:0:-21.93:21.93\n10\t81212443\t988144:1\tA\t[Un_KN707693v1_decoy:1[A\t66\tPASS\tEVDNC=ASSMB;HOMSEQ=GAGTCAATTAAACCTCTTTCCTTTATAAATTA;INSERTION=CTACCGCCATGTAAAGAAGGACGTGTTTGCTTCCCTTTCCAA;MAPQ=60;MATEID=988144:2;MATENM=2;NM=0;NUMPARTS=6;SCTG=c_544_1_2899_9C;SPAN=-1;SUBN=8;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:22:7:6:66,6,0:22:0:-66.02:66.02\n10\t81212445\t988145:1\tA\tA]Un_KN707693v1_decoy:2899]\t49\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=988145:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_544_1_2899_6C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:17:5:4.5:49.5,4.5,0:17:0:-49.51:49.51\n10\t81753084\t557475:1\tA\t]10:83297494]A\t12\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;INSERTION=T;MAPQ=60;MATEID=557475:2;MATENM=0;NM=1;NUMPARTS=2;REPSEQ=AA;SCTG=c_10_81732001_81757001_7C;SECONDARY;SPAN=1544410;SUBN=6;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:5:15:12.2:12.2,0,25.4:3:3:-12.29:12.54\n10\t82229402\t557634:1\tA\tA[10:82238231[\t18\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AGAAA;MAPQ=60;MATEID=557634:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_10_82222001_82247001_45C;SPAN=8829;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:29:18.2:18.2,0,54.5:5:6:-18.26:19.27\n10\t82238231\t557634:2\tA\t]10:82229402]A\t18\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AGAAA;MAPQ=60;MATEID=557634:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_10_82222001_82247001_45C;SPAN=8829;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:29:18.2:18.2,0,54.5:5:6:-18.26:19.27\n10\t82529077\t557702:1\tT\tT[10:82658176[\t42\tPASS\tEVDNC=ASSMB;INSERTION=ATATAT;MAPQ=60;MATEID=557702:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_82638501_82663501_36C;SPAN=129099;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:14:14:3.9:42.9,3.9,0:14:0:-42.91:42.91\n10\t82658176\t557702:2\tA\t]10:82529077]A\t42\tPASS\tEVDNC=ASSMB;INSERTION=ATATAT;MAPQ=60;MATEID=557702:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_82638501_82663501_36C;SPAN=129099;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:14:14:3.9:42.9,3.9,0:14:0:-42.91:42.91\n10\t83297494\t557475:2\tG\tG[10:81753084[\t12\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;INSERTION=T;MAPQ=0;MATEID=557475:1;MATENM=1;NM=0;NUMPARTS=2;REPSEQ=AA;SCTG=c_10_81732001_81757001_7C;SECONDARY;SPAN=1544410;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:5:15:12.2:12.2,0,25.4:3:3:-12.29:12.54\n10\t83907452\t558069:1\tA\t]10:83907659]A\t34\tPASS\tEVDNC=ASSMB;INSERTION=T;MAPQ=60;MATEID=558069:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_83888001_83913001_24C;SPAN=207;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:42:34.4:34.4,0,70.7:14:0:-34.41:35.12\n10\t83907659\t558069:2\tA\tA[10:83907452[\t34\tPASS\tEVDNC=ASSMB;INSERTION=T;MAPQ=60;MATEID=558069:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_83888001_83913001_24C;SPAN=207;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:42:34.4:34.4,0,70.7:14:0:-34.41:35.12\n10\t85042018\t558387:1\tT\tT[10:85042685[\t59\tPASS\tEVDNC=ASSMB;INSERTION=CATTCTGATTAATCCTTCTTG;MAPQ=60;MATEID=558387:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_10_85039501_85064501_14C;SPAN=667;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:21:36:29.6:59.3,0,29.6:21:0:-59.66:59.66\n10\t85042021\t558389:1\tC\t]10:85042847]C\t68\tPASS\tEVDNC=ASSMB;INSERTION=AAATT;MAPQ=60;MATEID=558389:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_10_85039501_85064501_70C;SPAN=826;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:24:38:25.7:68.6,0,25.7:24:0:-69.52:69.52\n10\t85042685\t558387:2\tT\t]10:85042018]T\t59\tPASS\tEVDNC=ASSMB;INSERTION=CATTCTGATTAATCCTTCTTG;MAPQ=60;MATEID=558387:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_10_85039501_85064501_14C;SPAN=667;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:21:36:29.6:59.3,0,29.6:21:0:-59.66:59.66\n10\t85042847\t558389:2\tT\tT[10:85042021[\t68\tPASS\tEVDNC=ASSMB;INSERTION=AAATT;MAPQ=60;MATEID=558389:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_10_85039501_85064501_70C;SPAN=826;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:24:38:25.7:68.6,0,25.7:24:0:-69.52:69.52\n10\t86524714\t558731:1\tC\t]10:86524809]C\t65\tPASS\tEVDNC=ASSMB;HOMSEQ=CTG;MAPQ=60;MATEID=558731:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_86509501_86534501_39C;SPAN=95;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:24:50:58.7:65.3,0,58.7:24:0:-65.18:65.18\n10\t86524809\t558731:2\tG\tG[10:86524714[\t65\tPASS\tEVDNC=ASSMB;HOMSEQ=CTG;MAPQ=60;MATEID=558731:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_86509501_86534501_39C;SPAN=95;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:24:50:58.7:65.3,0,58.7:24:0:-65.18:65.18\n10\t87516040\t559033:1\tG\tG[10:87516812[\t49\tPASS\tDISC_MAPQ=51;EVDNC=ASDIS;INSERTION=TGAAAATACATGT;MAPQ=60;MATEID=559033:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_10_87514001_87539001_34C;SPAN=772;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:17:12:4.5:49.5,4.5,0:14:8:-49.51:49.51\n10\t87516812\t559033:2\tA\t]10:87516040]A\t49\tPASS\tDISC_MAPQ=58;EVDNC=ASDIS;INSERTION=TGAAAATACATGT;MAPQ=60;MATEID=559033:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_10_87514001_87539001_34C;SPAN=772;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:17:12:4.5:49.5,4.5,0:14:8:-49.51:49.51\n10\t88134552\t559231:1\tT\t]10:88134621]T\t41\tPASS\tDISC_MAPQ=255;EVDNC=TSI_L;HOMSEQ=ACCATCATTATAACCACCACTAC;INSERTION=CCATCACCATCATCATTATGACCACCTCACCACCACCACCACAAAGGCCATCATTATAACCACCGCTAACACTACTATCACCATCACCATCATCAT;MAPQ=60;MATEID=559231:2;MATENM=6;NM=1;NUMPARTS=3;REPSEQ=TACTACTAC;SCTG=c_10_88126501_88151501_3C;SPAN=69;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:35:80:41.8:41.8,0,49:35:0:-41.35:41.44\n10\t88134621\t559231:2\tA\tA[10:88134552[\t41\tPASS\tDISC_MAPQ=255;EVDNC=TSI_L;HOMSEQ=ACCATCATTATAACCACCACTAC;INSERTION=CCATCACCATCATCATTATGACCACCTCACCACCACCACCACAAAGGCCATCATTATAACCACCGCTAACACTACTATCACCATCACCATCATCAT;MAPQ=60;MATEID=559231:1;MATENM=1;NM=6;NUMPARTS=3;REPSEQ=TACTACTAC;SCTG=c_10_88126501_88151501_3C;SPAN=69;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:35:80:41.8:41.8,0,49:35:0:-41.35:41.44\n10\t92326236\t560176:1\tT\t]10:92336729]T\t17\tPASS\tEVDNC=ASSMB;HOMSEQ=TA;MAPQ=60;MATEID=560176:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_92316001_92341001_16C;SPAN=10493;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:42:17.9:17.9,0,87.2:9:0:-17.9:20.54\n10\t92336729\t560176:2\tA\tA[10:92326236[\t17\tPASS\tEVDNC=ASSMB;HOMSEQ=TA;MAPQ=60;MATEID=560176:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_92316001_92341001_16C;SPAN=10493;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:42:17.9:17.9,0,87.2:9:0:-17.9:20.54\n10\t92374842\t560194:1\tA\tA[10:92377897[\t59\tPASS\tEVDNC=ASSMB;INSERTION=GTTGACTTATCTTTT;MAPQ=60;MATEID=560194:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_92365001_92390001_30C;SPAN=3055;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:20:20:5.4:59.4,5.4,0:20:0:-59.41:59.41\n10\t92377897\t560194:2\tA\t]10:92374842]A\t59\tPASS\tEVDNC=ASSMB;INSERTION=GTTGACTTATCTTTT;MAPQ=60;MATEID=560194:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_92365001_92390001_30C;SPAN=3055;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:20:20:5.4:59.4,5.4,0:20:0:-59.41:59.41\n10\t93785720\t560655:1\tA\tA[10:93786739[\t99\tPASS\tEVDNC=ASSMB;INSERTION=CCACCACATGGCACACAAAAGGGTG;MAPQ=60;MATEID=560655:2;MATENM=7;NM=2;NUMPARTS=2;SCTG=c_10_93786001_93811001_55C;SPAN=1019;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:35:6:9.6:105.6,9.6,0:35:0:-105.6:105.6\n10\t93786739\t560655:2\tG\t]10:93785720]G\t99\tPASS\tEVDNC=ASSMB;INSERTION=CCACCACATGGCACACAAAAGGGTG;MAPQ=60;MATEID=560655:1;MATENM=2;NM=7;NUMPARTS=2;SCTG=c_10_93786001_93811001_55C;SPAN=1019;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:35:6:9.6:105.6,9.6,0:35:0:-105.6:105.6\n10\t94531640\t560853:2\tT\t]3:183712226]T\t23\tPASS\tEVDNC=ASSMB;HOMSEQ=TTATTTTATTTTATTTTATTTTATTTTATTTT;MAPQ=60;MATEID=560853:1;MATENM=0;NM=1;NUMPARTS=3;SCTG=c_10_94521001_94546001_53C;SECONDARY;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:21:23.9:23.9,0,27.2:9:0:-23.81:23.84\n10\t97275116\t561674:1\tG\tG[10:97277641[\t89\tPASS\tEVDNC=ASSMB;HOMSEQ=TAAAGCACTG;MAPQ=60;MATEID=561674:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_10_97265001_97290001_7C;SPAN=2525;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:29:16:8.1:89.1,8.1,0:29:0:-89.12:89.12\n10\t97277641\t561674:2\tT\t]10:97275116]T\t89\tPASS\tEVDNC=ASSMB;HOMSEQ=TAAAGCACTG;MAPQ=60;MATEID=561674:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_10_97265001_97290001_7C;SPAN=2525;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:29:16:8.1:89.1,8.1,0:29:0:-89.12:89.12\n10\t97348534\t561719:1\tT\tT[10:97348852[\t85\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=CACTATCCT;MAPQ=60;MATEID=561719:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_97338501_97363501_125C;SPAN=318;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:28:18:7.8:85.8,7.8,0:23:6:-85.82:85.82\n10\t97348852\t561719:2\tC\t]10:97348534]C\t85\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=CACTATCCT;MAPQ=60;MATEID=561719:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_97338501_97363501_125C;SPAN=318;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:28:18:7.8:85.8,7.8,0:23:6:-85.82:85.82\n10\t100092116\t562623:2\tC\t[4:152957[C\t36\tPASS\tDISC_MAPQ=9;EVDNC=ASDIS;INSERTION=C;MAPQ=60;MATEID=562623:1;MATENM=0;NM=24;NUMPARTS=2;SCTG=c_10_100082501_100107501_1C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:12:3:3.3:36.3,3.3,0:5:8:-36.31:36.31\n10\t100398553\t562722:1\tT\tT[10:100399781[\t59\tPASS\tEVDNC=ASSMB;HOMSEQ=CT;MAPQ=60;MATEID=562722:2;MATENM=5;NM=1;NUMPARTS=2;SCTG=c_10_100376501_100401501_6C;SPAN=1228;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:20:11:5.4:59.4,5.4,0:20:0:-59.41:59.41\n10\t100399781\t562722:2\tC\t]10:100398553]C\t59\tPASS\tEVDNC=ASSMB;HOMSEQ=CT;MAPQ=60;MATEID=562722:1;MATENM=1;NM=5;NUMPARTS=2;SCTG=c_10_100376501_100401501_6C;SPAN=1228;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:20:11:5.4:59.4,5.4,0:20:0:-59.41:59.41\n10\t101685980\t563070:1\tC\tC[10:101686579[\t38\tPASS\tEVDNC=ASSMB;HOMSEQ=TTC;MAPQ=60;MATEID=563070:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_101675001_101700001_27C;SPAN=599;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:28:31.7:38.3,0,31.7:14:0:-38.37:38.37\n10\t101686579\t563070:2\tT\t]10:101685980]T\t38\tPASS\tEVDNC=ASSMB;HOMSEQ=TTC;MAPQ=60;MATEID=563070:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_101675001_101700001_27C;SPAN=599;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:28:31.7:38.3,0,31.7:14:0:-38.37:38.37\n10\t103293432\t563413:1\tG\tG[10:103294423[\t79\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=GGCATGGTGGCTCACGCCTGTAATCCCAGCACTTTGGG;MAPQ=60;MATEID=563413:2;MATENM=1;NM=2;NUMPARTS=2;SCTG=c_10_103292001_103317001_15C;SPAN=991;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:26:8:7.2:79.2,7.2,0:17:10:-79.22:79.22\n10\t103294423\t563413:2\tG\t]10:103293432]G\t79\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=GGCATGGTGGCTCACGCCTGTAATCCCAGCACTTTGGG;MAPQ=60;MATEID=563413:1;MATENM=2;NM=1;NUMPARTS=2;SCTG=c_10_103292001_103317001_15C;SPAN=991;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:26:8:7.2:79.2,7.2,0:17:10:-79.22:79.22\n10\t103337782\t563426:1\tC\tC[10:103338080[\t39\tPASS\tEVDNC=ASSMB;HOMSEQ=AAAAATACAAAATTAGC;MAPQ=60;MATEID=563426:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_10_103316501_103341501_31C;SPAN=298;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:13:10:3.6:39.6,3.6,0:13:0:-39.61:39.61\n10\t103338080\t563426:2\tA\t]10:103337782]A\t39\tPASS\tEVDNC=ASSMB;HOMSEQ=AAAAATACAAAATTAGC;MAPQ=60;MATEID=563426:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_10_103316501_103341501_31C;SPAN=298;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:13:10:3.6:39.6,3.6,0:13:0:-39.61:39.61\n10\t105493244\t563943:1\tG\tG[10:105493594[\t66\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AGGG;MAPQ=60;MATEID=563943:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_105472501_105497501_69C;SPAN=350;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:22:16:6:66,6,0:13:12:-66.02:66.02\n10\t105493594\t563943:2\tA\t]10:105493244]A\t66\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AGGG;MAPQ=60;MATEID=563943:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_105472501_105497501_69C;SPAN=350;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:22:16:6:66,6,0:13:12:-66.02:66.02\n10\t106270563\t564296:1\tC\tC[10:106272784[\t38\tPASS\tEVDNC=ASSMB;HOMSEQ=CTCC;MAPQ=60;MATEID=564296:2;MATENM=0;NM=3;NUMPARTS=2;SCTG=c_10_106256501_106281501_80C;SPAN=2221;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:17:2:38.3,0,2:13:0:-39.65:39.65\n10\t106272784\t564296:2\tC\t]10:106270563]C\t38\tPASS\tEVDNC=ASSMB;HOMSEQ=CTCC;MAPQ=60;MATEID=564296:1;MATENM=3;NM=0;NUMPARTS=2;SCTG=c_10_106256501_106281501_80C;SPAN=2221;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:17:2:38.3,0,2:13:0:-39.65:39.65\n10\t108459565\t564965:1\tT\t]10:108459702]T\t23\tPASS\tEVDNC=ASSMB;HOMSEQ=TAAA;MAPQ=60;MATEID=564965:2;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_10_108437001_108462001_27C;SPAN=137;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:35:23.3:23.3,0,62.9:10:0:-23.17:24.27\n10\t108459702\t564965:2\tA\tA[10:108459565[\t23\tPASS\tEVDNC=ASSMB;HOMSEQ=TAAA;MAPQ=60;MATEID=564965:1;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_10_108437001_108462001_27C;SPAN=137;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:35:23.3:23.3,0,62.9:10:0:-23.17:24.27\n10\t108936075\t565091:1\tT\tT[10:108936418[\t32\tPASS\tDISC_MAPQ=255;EVDNC=TSI_G;HOMSEQ=ATATATATAT;INSERTION=GTATGAATATATATGTATGAATATATGAAAAA;MAPQ=60;MATEID=565091:2;MATENM=0;NM=0;NUMPARTS=3;SCTG=c_10_108927001_108952001_35C;SPAN=343;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:24:26.3:32.9,0,26.3:12:0:-32.89:32.89\n10\t108936418\t565091:2\tT\t]10:108936075]T\t32\tPASS\tDISC_MAPQ=255;EVDNC=TSI_G;HOMSEQ=ATATATATAT;INSERTION=GTATGAATATATATGTATGAATATATGAAAAA;MAPQ=60;MATEID=565091:1;MATENM=0;NM=0;NUMPARTS=3;SCTG=c_10_108927001_108952001_35C;SPAN=343;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:24:26.3:32.9,0,26.3:12:0:-32.89:32.89\n10\t109812476\t565264:1\tC\tC[10:109818458[\t75\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=565264:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=10:109812476(+)-10:109818458(-)__10_109809001_109834001D;SPAN=5982;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:25:14:6.9:75.9,6.9,0:0:25:-75.92:75.92\n10\t109818458\t565264:2\tT\t]10:109812476]T\t75\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=565264:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=10:109812476(+)-10:109818458(-)__10_109809001_109834001D;SPAN=5982;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:25:14:6.9:75.9,6.9,0:0:25:-75.92:75.92\n10\t110418405\t565388:2\tA\tA[7:93347523[\t72\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;MAPQ=60;MATEID=565388:1;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_10_110397001_110422001_54C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:24:12:6.6:72.6,6.6,0:14:15:-72.62:72.62\n10\t112352425\t565981:1\tG\tG[10:112356901[\t13\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=GG;MAPQ=60;MATEID=565981:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_112357001_112382001_92C;SPAN=4476;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:5:3:1.2:13.2,1.2,0:4:3:-13.2:13.2\n10\t112356901\t565981:2\tG\t]10:112352425]G\t13\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=GG;MAPQ=60;MATEID=565981:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_112357001_112382001_92C;SPAN=4476;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:5:3:1.2:13.2,1.2,0:4:3:-13.2:13.2\n10\t112916251\t566258:1\tT\tT[10:113538596[\t32\tPASS\tEVDNC=ASSMB;HOMSEQ=T;MAPQ=60;MATEID=566258:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_113533001_113558001_15C;SPAN=622345;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:14:2.6:32.3,0,2.6:11:0:-33.83:33.83\n10\t113538596\t566258:2\tT\t]10:112916251]T\t32\tPASS\tEVDNC=ASSMB;HOMSEQ=T;MAPQ=60;MATEID=566258:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_113533001_113558001_15C;SPAN=622345;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:14:2.6:32.3,0,2.6:11:0:-33.83:33.83\n10\t113789804\t566308:1\tC\tC[10:113790335[\t19\tPASS\tEVDNC=ASSMB;HOMSEQ=GGTGGCTCATGC;MAPQ=60;MATEID=566308:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_113778001_113803001_1C;SPAN=531;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:26:19.1:19.1,0,45.5:8:0:-19.1:19.73\n10\t113790335\t566308:2\tG\t]10:113789804]G\t19\tPASS\tEVDNC=ASSMB;HOMSEQ=GGTGGCTCATGC;MAPQ=60;MATEID=566308:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_113778001_113803001_1C;SPAN=531;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:26:19.1:19.1,0,45.5:8:0:-19.1:19.73\n10\t115697337\t566990:1\tA\t]10:115917901]A\t39\tPASS\tEVDNC=ASSMB;HOMSEQ=AT;MAPQ=60;MATEID=566990:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_115909501_115934501_2C;SPAN=220564;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:23:16.7:39.8,0,16.7:14:0:-40.18:40.18\n10\t115917901\t566990:2\tT\tT[10:115697337[\t39\tPASS\tEVDNC=ASSMB;HOMSEQ=AT;MAPQ=60;MATEID=566990:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_115909501_115934501_2C;SPAN=220564;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:23:16.7:39.8,0,16.7:14:0:-40.18:40.18\n10\t116079800\t567050:1\tA\tA[10:116121012[\t23\tPASS\tEVDNC=ASSMB;HOMSEQ=TCGA;MAPQ=60;MATEID=567050:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_116105501_116130501_72C;SPAN=41212;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:7:8:2.1:23.1,2.1,0:7:0:-22.34:22.34\n10\t116121012\t567050:2\tT\t]10:116079800]T\t23\tPASS\tEVDNC=ASSMB;HOMSEQ=TCGA;MAPQ=60;MATEID=567050:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_116105501_116130501_72C;SPAN=41212;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:7:8:2.1:23.1,2.1,0:7:0:-22.34:22.34\n10\t116902437\t567330:1\tT\t]10:116990707]T\t29\tPASS\tDISC_MAPQ=56;EVDNC=ASDIS;INSERTION=TTTTCA;MAPQ=60;MATEID=567330:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_116987501_117012501_21C;SPAN=88270;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:10:12:0:29.7,0,0:6:6:-31.35:31.35\n10\t116990707\t567330:2\tA\tA[10:116902437[\t29\tPASS\tDISC_MAPQ=58;EVDNC=ASDIS;INSERTION=TTTTCA;MAPQ=60;MATEID=567330:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_116987501_117012501_21C;SPAN=88270;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:10:12:0:29.7,0,0:6:6:-31.35:31.35\n10\t119426866\t568110:1\tT\t]10:119427330]T\t21\tPASS\tDISC_MAPQ=35;EVDNC=ASDIS;HOMSEQ=TGCCATCAACAGCATCACTGCC;MAPQ=35;MATEID=568110:2;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_10_119413001_119438001_56C;SPAN=464;SUBN=1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:53:21.5:21.5,0,110.6:4:7:-21.41:24.93\n10\t119427330\t568110:2\tC\tC[10:119426866[\t21\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TGCCATCAACAGCATCACTGCC;MAPQ=60;MATEID=568110:1;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_10_119413001_119438001_56C;SPAN=464;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:53:21.5:21.5,0,110.6:4:7:-21.41:24.93\n10\t120467203\t568417:1\tC\tC[10:120469236[\t59\tPASS\tDISC_MAPQ=54;EVDNC=ASDIS;HOMSEQ=TTTTTTTTTTGAGACGGAGTCTTGCTCTGTCGCCCAGGCTGGACTGCAGTGGCACAATCTCAGCTCACTGCAAGCTCCACCTCCCAGGTTCACACCATTCTCCTGCCTCAGCCTCCC;MAPQ=60;MATEID=568417:2;MATENM=5;NM=5;NUMPARTS=2;SCTG=c_10_120466501_120491501_15C;SPAN=2033;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:20:3:5.4:59.4,5.4,0:4:16:-59.41:59.41\n10\t120469236\t568417:2\tT\t]10:120467203]T\t59\tPASS\tDISC_MAPQ=56;EVDNC=ASDIS;HOMSEQ=TTTTTTTTTTGAGACGGAGTCTTGCTCTGTCGCCCAGGCTGGACTGCAGTGGCACAATCTCAGCTCACTGCAAGCTCCACCTCCCAGGTTCACACCATTCTCCTGCCTCAGCCTCCC;MAPQ=60;MATEID=568417:1;MATENM=5;NM=5;NUMPARTS=2;SCTG=c_10_120466501_120491501_15C;SPAN=2033;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:20:3:5.4:59.4,5.4,0:4:16:-59.41:59.41\n10\t122457304\t569156:1\tG\tG[10:122457748[\t72\tPASS\tEVDNC=ASSMB;INSERTION=TTATTAATTAATTAACTAAAATTAAATTATTTAGTTAATTTAATTAACTAAACT;MAPQ=60;MATEID=569156:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_122451001_122476001_97C;SPAN=444;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:24:17:6.6:72.6,6.6,0:24:0:-72.62:72.62\n10\t122457748\t569156:2\tA\t]10:122457304]A\t72\tPASS\tEVDNC=ASSMB;INSERTION=TTATTAATTAATTAACTAAAATTAAATTATTTAGTTAATTTAATTAACTAAACT;MAPQ=60;MATEID=569156:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_122451001_122476001_97C;SPAN=444;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:24:17:6.6:72.6,6.6,0:24:0:-72.62:72.62\n10\t121496612\t569156:2\tA\t]10:122457304]C\t72\tPASS\tEVDNC=ASSMB;INSERTION=TTATTAATTAATTAACTAAAATTAAATTATTTAGTTAATTTAATTAACTAAACT;MAPQ=60;MATEID=569156:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_122451001_122476001_97C;SPAN=444;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:24:17:6.6:72.6,6.6,0:24:0:-72.62:72.62\n10\t123254349\t569333:1\tT\t]10:123254874]T\t43\tPASS\tDISC_MAPQ=38;EVDNC=DSCRD;IMPRECISE;MAPQ=38;MATEID=569333:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=10:123254349(-)-10:123254874(+)__10_123235001_123260001D;SPAN=525;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:16:33:37.1:43.7,0,37.1:0:16:-43.55:43.55\n10\t123254874\t569333:2\tA\tA[10:123254349[\t43\tPASS\tDISC_MAPQ=46;EVDNC=DSCRD;IMPRECISE;MAPQ=46;MATEID=569333:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=10:123254349(-)-10:123254874(+)__10_123235001_123260001D;SPAN=525;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:16:33:37.1:43.7,0,37.1:0:16:-43.55:43.55\n10\t123254953\t569351:1\tC\t]10:123255771]C\t61\tPASS\tDISC_MAPQ=24;EVDNC=DSCRD;IMPRECISE;MAPQ=24;MATEID=569351:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=10:123254953(-)-10:123255771(+)__10_123235001_123260001D;SPAN=818;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:22:39:35.3:61.7,0,35.3:0:22:-62:62\n10\t123255771\t569351:2\tA\tA[10:123254953[\t61\tPASS\tDISC_MAPQ=19;EVDNC=DSCRD;IMPRECISE;MAPQ=19;MATEID=569351:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=10:123254953(-)-10:123255771(+)__10_123235001_123260001D;SPAN=818;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:22:39:35.3:61.7,0,35.3:0:22:-62:62\n10\t125501848\t570076:1\tT\t[10:125502195[T\t47\tPASS\tDISC_MAPQ=58;EVDNC=DSCRD;IMPRECISE;MAPQ=58;MATEID=570076:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=10:125501848(-)-10:125502195(-)__10_125489001_125514001D;SPAN=347;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:17:33:33.8:47,0,33.8:0:17:-46.91:46.91\n10\t125502112\t570079:1\tC\tC]10:125508653]\t99\tPASS\tEVDNC=ASSMB;HOMSEQ=GGA;MAPQ=60;MATEID=570079:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_10_125489001_125514001_4C;SPAN=6541;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:33:30:9:99,9,0:33:0:-99.02:99.02\n10\t125502195\t570076:2\tC\t[10:125501848[C\t47\tPASS\tDISC_MAPQ=57;EVDNC=DSCRD;IMPRECISE;MAPQ=57;MATEID=570076:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=10:125501848(-)-10:125502195(-)__10_125489001_125514001D;SPAN=347;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:17:33:33.8:47,0,33.8:0:17:-46.91:46.91\n10\t125502228\t570080:1\tC\t]10:125512653]C\t42\tPASS\tEVDNC=ASSMB;HOMSEQ=CCACCAT;MAPQ=60;MATEID=570080:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_125489001_125514001_23C;SPAN=10425;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:16:37:42.5:42.5,0,49.1:16:0:-42.42:42.46\n10\t125503088\t570084:1\tC\tC[10:125508666[\t57\tPASS\tEVDNC=ASSMB;HOMSEQ=GC;MAPQ=60;MATEID=570084:2;MATENM=8;NM=0;NUMPARTS=2;SCTG=c_10_125489001_125514001_8C;SPAN=5578;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:20:29:14.9:57.8,0,14.9:20:0:-59.26:59.26\n10\t125508653\t570079:2\tA\tA]10:125502112]\t99\tPASS\tEVDNC=ASSMB;HOMSEQ=GGA;MAPQ=60;MATEID=570079:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_10_125489001_125514001_4C;SPAN=6541;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:33:30:9:99,9,0:33:0:-99.02:99.02\n10\t125508666\t570084:2\tG\t]10:125503088]G\t57\tPASS\tEVDNC=ASSMB;HOMSEQ=GC;MAPQ=60;MATEID=570084:1;MATENM=0;NM=8;NUMPARTS=2;SCTG=c_10_125489001_125514001_8C;SPAN=5578;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:20:29:14.9:57.8,0,14.9:20:0:-59.26:59.26\n10\t125512653\t570080:2\tT\tT[10:125502228[\t42\tPASS\tEVDNC=ASSMB;HOMSEQ=CCACCAT;MAPQ=60;MATEID=570080:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_125489001_125514001_23C;SPAN=10425;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:16:37:42.5:42.5,0,49.1:16:0:-42.42:42.46\n10\t125894203\t907396:1\tA\tA[22:10739861[\t44\tPASS\tDISC_MAPQ=15;EVDNC=DSCRD;IMPRECISE;MAPQ=15;MATEID=907396:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=10:125894203(+)-22:10739861(-)__22_10731001_10756001D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:20:75:44.9:44.9,0,143.9:0:20:-44.94:47.83\n10\t125895950\t907397:1\tC\t]22:10741540]C\t25\tPASS\tDISC_MAPQ=40;EVDNC=DSCRD;IMPRECISE;MAPQ=40;MATEID=907397:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=10:125895950(-)-22:10741540(+)__22_10731001_10756001D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:16:12.2:25.4,0,12.2:0:9:-25.35:25.35\n10\t126251496\t570306:1\tC\t]10:126252270]C\t35\tPASS\tDISC_MAPQ=53;EVDNC=DSCRD;IMPRECISE;MAPQ=53;MATEID=570306:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=10:126251496(-)-10:126252270(+)__10_126248501_126273501D;SPAN=774;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:37:35.9:35.9,0,55.7:0:14:-35.81:36.09\n10\t126252270\t570306:2\tG\tG[10:126251496[\t35\tPASS\tDISC_MAPQ=43;EVDNC=DSCRD;IMPRECISE;MAPQ=43;MATEID=570306:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=10:126251496(-)-10:126252270(+)__10_126248501_126273501D;SPAN=774;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:37:35.9:35.9,0,55.7:0:14:-35.81:36.09\n10\t126892082\t570478:2\tA\t]7:26639999]A\t30\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=570478:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:26639999(+)-10:126892082(-)__10_126885501_126910501D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:21:20.6:30.5,0,20.6:0:11:-30.47:30.47\n10\t127169427\t570581:1\tT\tT[10:127169686[\t9\tPASS\tEVDNC=ASSMB;HOMSEQ=T;MAPQ=60;MATEID=570581:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_127155001_127180001_14C;SPAN=259;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:5:25:9.5:9.5,0,52.4:5:0:-9.478:11.24\n10\t127169686\t570581:2\tT\t]10:127169427]T\t9\tPASS\tEVDNC=ASSMB;HOMSEQ=T;MAPQ=60;MATEID=570581:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_127155001_127180001_14C;SPAN=259;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:5:25:9.5:9.5,0,52.4:5:0:-9.478:11.24\n10\t127767049\t570874:1\tT\tT[10:127767345[\t62\tPASS\tEVDNC=ASSMB;HOMSEQ=TAGTTTTTTTT;MAPQ=60;MATEID=570874:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_10_127743001_127768001_17C;SPAN=296;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:21:14:5.7:62.7,5.7,0:21:0:-62.72:62.72\n10\t127767345\t570874:2\tT\t]10:127767049]T\t62\tPASS\tEVDNC=ASSMB;HOMSEQ=TAGTTTTTTTT;MAPQ=60;MATEID=570874:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_10_127743001_127768001_17C;SPAN=296;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:21:14:5.7:62.7,5.7,0:21:0:-62.72:62.72\n10\t129038607\t571258:1\tT\tT[10:129039011[\t24\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;MAPQ=60;MATEID=571258:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_10_129017001_129042001_63C;SPAN=404;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:31:24.5:24.5,0,50.9:7:4:-24.3:24.91\n10\t129039011\t571258:2\tT\t]10:129038607]T\t24\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;MAPQ=60;MATEID=571258:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_10_129017001_129042001_63C;SPAN=404;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:31:24.5:24.5,0,50.9:7:4:-24.3:24.91\n10\t129796916\t571494:1\tA\tA[10:129797210[\t20\tPASS\tEVDNC=ASSMB;HOMSEQ=GCA;MAPQ=60;MATEID=571494:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_129776501_129801501_112C;SPAN=294;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:22:20.3:20.3,0,33.5:8:0:-20.22:20.45\n10\t129797210\t571494:2\tG\t]10:129796916]G\t20\tPASS\tEVDNC=ASSMB;HOMSEQ=GCA;MAPQ=60;MATEID=571494:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_129776501_129801501_112C;SPAN=294;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:22:20.3:20.3,0,33.5:8:0:-20.22:20.45\n10\t130496358\t571701:1\tC\t]10:130496511]C\t96\tPASS\tEVDNC=ASSMB;INSERTION=GCATGATGACTTCG;MAPQ=60;MATEID=571701:2;MATENM=6;NM=4;NUMPARTS=2;SCTG=c_10_130487001_130512001_9C;SPAN=153;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:36:79:96.8:96.8,0,100.1:36:0:-96.63:96.64\n10\t130496418\t571702:1\tG\t]10:130496534]G\t85\tPASS\tEVDNC=ASSMB;INSERTION=GGGATGGAAGTAACCTTCTGCATGATGACTTCGCTAGTACATGGGAGGGAA;MAPQ=60;MATEID=571702:2;MATENM=4;NM=2;NUMPARTS=2;SCTG=c_10_130487001_130512001_1C;SPAN=116;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:34:96:85.4:85.4,0,154.7:34:0:-85.25:86.4\n10\t130496511\t571701:2\tT\tT[10:130496358[\t96\tPASS\tEVDNC=ASSMB;INSERTION=GCATGATGACTTCG;MAPQ=60;MATEID=571701:1;MATENM=4;NM=6;NUMPARTS=2;SCTG=c_10_130487001_130512001_9C;SPAN=153;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:36:79:96.8:96.8,0,100.1:36:0:-96.63:96.64\n10\t130496534\t571702:2\tC\tC[10:130496418[\t85\tPASS\tEVDNC=ASSMB;INSERTION=GGGATGGAAGTAACCTTCTGCATGATGACTTCGCTAGTACATGGGAGGGAA;MAPQ=60;MATEID=571702:1;MATENM=2;NM=4;NUMPARTS=2;SCTG=c_10_130487001_130512001_1C;SPAN=116;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:34:96:85.4:85.4,0,154.7:34:0:-85.25:86.4\n10\t130790016\t571781:1\tT\t]10:130790900]T\t60\tPASS\tDISC_MAPQ=41;EVDNC=DSCRD;IMPRECISE;MAPQ=41;MATEID=571781:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=10:130790016(-)-10:130790900(+)__10_130781001_130806001D;SPAN=884;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:21:31:14.6:60.8,0,14.6:0:21:-61.93:61.93\n10\t130790062\t571782:1\tC\t]10:130790698]C\t38\tPASS\tEVDNC=ASSMB;INSERTION=TA;MAPQ=60;MATEID=571782:2;MATENM=1;NM=2;NUMPARTS=2;SCTG=c_10_130781001_130806001_6C;SPAN=636;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:16:53:38:38,0,94.1:16:0:-37.92:39.29\n10\t130790698\t571782:2\tA\tA[10:130790062[\t38\tPASS\tEVDNC=ASSMB;INSERTION=TA;MAPQ=60;MATEID=571782:1;MATENM=2;NM=1;NUMPARTS=2;SCTG=c_10_130781001_130806001_6C;SPAN=636;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:16:53:38:38,0,94.1:16:0:-37.92:39.29\n10\t130790900\t571781:2\tA\tA[10:130790016[\t60\tPASS\tDISC_MAPQ=44;EVDNC=DSCRD;IMPRECISE;MAPQ=44;MATEID=571781:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=10:130790016(-)-10:130790900(+)__10_130781001_130806001D;SPAN=884;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:21:31:14.6:60.8,0,14.6:0:21:-61.93:61.93\n10\t131176381\t571919:1\tA\t]10:131177187]A\t61\tPASS\tDISC_MAPQ=42;EVDNC=DSCRD;IMPRECISE;MAPQ=42;MATEID=571919:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=10:131176381(-)-10:131177187(+)__10_131173001_131198001D;SPAN=806;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:22:40:38.3:61.4,0,38.3:0:22:-61.64:61.64\n10\t131177187\t571919:2\tC\tC[10:131176381[\t61\tPASS\tDISC_MAPQ=50;EVDNC=DSCRD;IMPRECISE;MAPQ=50;MATEID=571919:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=10:131176381(-)-10:131177187(+)__10_131173001_131198001D;SPAN=806;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:22:40:38.3:61.4,0,38.3:0:22:-61.64:61.64\n10\t132056598\t785033:1\tA\tA[17:19919536[\t22\tPASS\tDISC_MAPQ=59;EVDNC=DSCRD;IMPRECISE;MAPQ=59;MATEID=785033:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=10:132056598(+)-17:19919536(-)__17_19918501_19943501D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:13:9.5:22.7,0,9.5:0:8:-23.02:23.02\n10\t133291375\t572642:1\tG\tG[10:133292453[\t39\tPASS\tDISC_MAPQ=54;EVDNC=DSCRD;IMPRECISE;MAPQ=54;MATEID=572642:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=10:133291375(+)-10:133292453(-)__10_133280001_133305001D;SPAN=1078;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:13:9:3.6:39.6,3.6,0:0:13:-39.61:39.61\n10\t133292453\t572642:2\tC\t]10:133291375]C\t39\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=572642:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=10:133291375(+)-10:133292453(-)__10_133280001_133305001D;SPAN=1078;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:13:9:3.6:39.6,3.6,0:0:13:-39.61:39.61\n11\t737067\t574073:1\tC\t]11:3896184]C\t69\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=CCAAAGTGCTGGGATTACAGGCG;MAPQ=60;MATEID=574073:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_11_3895501_3920501_27C;SPAN=3159117;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:23:13:6.3:69.3,6.3,0:21:5:-69.32:69.32\n11\t1078576\t573385:1\tC\tC[11:1081475[\t36\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=573385:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=11:1078576(+)-11:1081475(-)__11_1053501_1078501D;SPAN=2899;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:12:3:3.3:36.3,3.3,0:0:12:-36.31:36.31\n11\t1081475\t573385:2\tC\t]11:1078576]C\t36\tPASS\tDISC_MAPQ=43;EVDNC=DSCRD;IMPRECISE;MAPQ=43;MATEID=573385:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=11:1078576(+)-11:1081475(-)__11_1053501_1078501D;SPAN=2899;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:12:3:3.3:36.3,3.3,0:0:12:-36.31:36.31\n11\t1094541\t573395:1\tC\t]11:1095052]C\t15\tPASS\tDISC_MAPQ=7;EVDNC=TSI_L;INSERTION=TCTCCAATAACCACCACTCCCAGCCCTCCAACAACCACCATGACCACCCCTT;MAPQ=25;MATEID=573395:2;MATENM=3;NM=1;NUMPARTS=3;REPSEQ=ACCAACCA;SCTG=c_11_1078001_1103001_13C;SPAN=511;SUBN=1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:33:15:15,0,27:10:3:-14.72:15.08\n11\t1095052\t573395:2\tC\tC[11:1094541[\t15\tPASS\tDISC_MAPQ=28;EVDNC=TSI_L;INSERTION=TCTCCAATAACCACCACTCCCAGCCCTCCAACAACCACCATGACCACCCCTT;MAPQ=21;MATEID=573395:1;MATENM=1;NM=3;NUMPARTS=3;REPSEQ=ACCAACCA;SCTG=c_11_1078001_1103001_13C;SPAN=511;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:33:15:15,0,27:10:3:-14.72:15.08\n11\t1155037\t573441:1\tT\t]11:1155851]T\t79\tPASS\tDISC_MAPQ=56;EVDNC=DSCRD;IMPRECISE;MAPQ=56;MATEID=573441:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=11:1155037(-)-11:1155851(+)__11_1151501_1176501D;SPAN=814;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:26:22:7.2:79.2,7.2,0:0:26:-79.22:79.22\n11\t1155851\t573441:2\tT\tT[11:1155037[\t79\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=573441:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=11:1155037(-)-11:1155851(+)__11_1151501_1176501D;SPAN=814;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:26:22:7.2:79.2,7.2,0:0:26:-79.22:79.22\n11\t1894138\t573614:1\tG\tG[11:1915725[\t23\tPASS\tDISC_MAPQ=59;EVDNC=DSCRD;IMPRECISE;MAPQ=59;MATEID=573614:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=11:1894138(+)-11:1915725(-)__11_1911001_1936001D;SPAN=21587;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:8:2:2.1:23.1,2.1,0:0:8:-23.11:23.11\n11\t1915725\t573614:2\tT\t]11:1894138]T\t23\tPASS\tDISC_MAPQ=51;EVDNC=DSCRD;IMPRECISE;MAPQ=51;MATEID=573614:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=11:1894138(+)-11:1915725(-)__11_1911001_1936001D;SPAN=21587;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:8:2:2.1:23.1,2.1,0:0:8:-23.11:23.11\n11\t3896184\t574073:2\tG\tG[11:737067[\t69\tPASS\tDISC_MAPQ=24;EVDNC=ASDIS;HOMSEQ=CCAAAGTGCTGGGA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71501_89C;SPAN=96088;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:6:18:14.9:14.9,0,28.1:5:4:-14.75:15.05\n11\t20762949\t578367:2\tT\t[1:53954306[T\t39\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;MAPQ=60;MATEID=578367:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_20751501_20776501_46C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:13:9:3.6:39.6,3.6,0:11:3:-39.61:39.61\n11\t23346027\t579444:1\tA\t]11:23363347]A\t22\tPASS\tEVDNC=ASSMB;INSERTION=ACTGCAC;MAPQ=60;MATEID=579444:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_23348501_23373501_147C;SPAN=17320;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:16:15.5:22.1,0,15.5:8:0:-21.93:21.93\n11\t23363347\t579444:2\tG\tG[11:23346027[\t22\tPASS\tEVDNC=ASSMB;INSERTION=ACTGCAC;MAPQ=60;MATEID=579444:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_23348501_23373501_147C;SPAN=17320;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:16:15.5:22.1,0,15.5:8:0:-21.93:21.93\n11\t24263186\t579826:1\tT\tT]11:24266369]\t82\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=CT;MAPQ=60;MATEID=579826:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_24255001_24280001_12C;SPAN=3183;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:28:36:6.5:82.4,0,6.5:27:3:-85.84:85.84\n11\t24263419\t579827:1\tC\tC[11:24266243[\t67\tPASS\tDISC_MAPQ=54;EVDNC=ASDIS;HOMSEQ=AAC;MAPQ=60;MATEID=579827:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_24255001_24280001_51C;SPAN=2824;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:23:29:5:67.7,0,5:22:7:-70.94:70.94\n11\t24263577\t579828:1\tT\t[11:24266034[T\t32\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TA;MAPQ=60;MATEID=579828:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_24255001_24280001_26C;SPAN=2457;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:16:5.6:32,0,5.6:8:3:-32.57:32.57\n11\t24263704\t579829:1\tA\tA[11:24266691[\t41\tPASS\tEVDNC=ASSMB;INSERTION=TG;MAPQ=60;MATEID=579829:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_24255001_24280001_57C;SPAN=2987;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:19:4.7:41,0,4.7:14:0:-42.24:42.24\n11\t24266034\t579828:2\tT\t[11:24263577[T\t32\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TA;MAPQ=60;MATEID=579828:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_24255001_24280001_26C;SPAN=2457;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:16:5.6:32,0,5.6:8:3:-32.57:32.57\n11\t24266243\t579827:2\tA\t]11:24263419]A\t67\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AAC;MAPQ=60;MATEID=579827:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_24255001_24280001_51C;SPAN=2824;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:23:29:5:67.7,0,5:22:7:-70.94:70.94\n11\t24266369\t579826:2\tG\tG]11:24263186]\t82\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=CT;MAPQ=60;MATEID=579826:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_24255001_24280001_12C;SPAN=3183;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:28:36:6.5:82.4,0,6.5:27:3:-85.84:85.84\n11\t24266691\t579829:2\tC\t]11:24263704]C\t41\tPASS\tEVDNC=ASSMB;INSERTION=TG;MAPQ=60;MATEID=579829:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_24255001_24280001_57C;SPAN=2987;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:19:4.7:41,0,4.7:14:0:-42.24:42.24\n11\t25101793\t135182:2\tT\t[2:193213246[T\t85\tPASS\tDISC_MAPQ=56;EVDNC=ASDIS;MAPQ=60;MATEID=135182:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_2_193207001_193232001_9C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:28:27:7.8:85.8,7.8,0:25:7:-85.82:85.82\n11\t25542940\t580612:1\tT\tT[11:25543268[\t55\tPASS\tEVDNC=ASSMB;HOMSEQ=AAAACCATGGATGT;MAPQ=60;MATEID=580612:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_11_25529001_25554001_47C;SPAN=328;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:21:49:55.7:55.7,0,65.6:21:0:-55.55:55.62\n11\t25543268\t580612:2\tA\t]11:25542940]A\t55\tPASS\tEVDNC=ASSMB;HOMSEQ=AAAACCATGGATGT;MAPQ=60;MATEID=580612:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_11_25529001_25554001_47C;SPAN=328;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:21:49:55.7:55.7,0,65.6:21:0:-55.55:55.62\n11\t26007882\t580897:1\tA\tA[11:26008113[\t46\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=CAA;MAPQ=60;MATEID=580897:2;MATENM=3;NM=0;NUMPARTS=2;SCTG=c_11_25994501_26019501_114C;SPAN=231;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:15:10:4.2:46.2,4.2,0:11:5:-46.21:46.21\n11\t26008113\t580897:2\tC\t]11:26007882]C\t46\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=CAA;MAPQ=60;MATEID=580897:1;MATENM=0;NM=3;NUMPARTS=2;SCTG=c_11_25994501_26019501_114C;SPAN=231;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:15:10:4.2:46.2,4.2,0:11:5:-46.21:46.21\n11\t27635716\t581498:1\tG\tG[11:27636049[\t66\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=581498:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_27636001_27661001_23C;SPAN=333;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:22:10:6:66,6,0:22:0:-66.02:66.02\n11\t27636049\t581498:2\tC\t]11:27635716]C\t66\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=581498:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_27636001_27661001_23C;SPAN=333;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:22:10:6:66,6,0:22:0:-66.02:66.02\n11\t28985768\t581840:1\tT\tT[11:28991341[\t99\tPASS\tDISC_MAPQ=38;EVDNC=DSCRD;IMPRECISE;MAPQ=38;MATEID=581840:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=11:28985768(+)-11:28991341(-)__11_28983501_29008501D;SPAN=5573;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:34:8:9.3:102.3,9.3,0:0:34:-102.3:102.3\n11\t28991341\t581840:2\tG\t]11:28985768]G\t99\tPASS\tDISC_MAPQ=58;EVDNC=DSCRD;IMPRECISE;MAPQ=58;MATEID=581840:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=11:28985768(+)-11:28991341(-)__11_28983501_29008501D;SPAN=5573;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:34:8:9.3:102.3,9.3,0:0:34:-102.3:102.3\n11\t29946032\t582095:1\tT\tT[11:29946920[\t32\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=T;MAPQ=60;MATEID=582095:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_29939001_29964001_1C;SPAN=888;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:26:32.3:32.3,0,32.3:9:8:-32.3:32.3\n11\t29946920\t582095:2\tT\t]11:29946032]T\t32\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=T;MAPQ=60;MATEID=582095:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_29939001_29964001_1C;SPAN=888;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:26:32.3:32.3,0,32.3:9:8:-32.3:32.3\n11\t30928615\t998922:1\tA\t]Un_JTFH01000719v1_decoy:1230]A\t89\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=998922:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1562_1_1230_9C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:29:9:8.1:89.1,8.1,0:29:0:-89.12:89.12\n11\t31424301\t582447:1\tT\t]11:31433215]T\t26\tPASS\tEVDNC=ASSMB;INSERTION=ATCAAA;MAPQ=60;MATEID=582447:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_31409001_31434001_21C;SPAN=8914;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:46:26.9:26.9,0,86.3:12:0:-26.68:28.57\n11\t31433215\t582447:2\tA\tA[11:31424301[\t26\tPASS\tEVDNC=ASSMB;INSERTION=ATCAAA;MAPQ=60;MATEID=582447:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_31409001_31434001_21C;SPAN=8914;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:46:26.9:26.9,0,86.3:12:0:-26.68:28.57\n11\t32265107\t582645:1\tT\tT[11:32265428[\t23\tPASS\tEVDNC=ASSMB;HOMSEQ=AAGAAAAGGTCTT;MAPQ=60;MATEID=582645:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_32242001_32267001_80C;SPAN=321;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:36:23:23,0,65.9:10:0:-22.89:24.13\n11\t32265428\t582645:2\tA\t]11:32265107]A\t23\tPASS\tEVDNC=ASSMB;HOMSEQ=AAGAAAAGGTCTT;MAPQ=60;MATEID=582645:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_32242001_32267001_80C;SPAN=321;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:36:23:23,0,65.9:10:0:-22.89:24.13\n11\t32367805\t582688:1\tT\tT[11:32369112[\t38\tPASS\tDISC_MAPQ=58;EVDNC=DSCRD;IMPRECISE;MAPQ=58;MATEID=582688:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=11:32367805(+)-11:32369112(-)__11_32364501_32389501D;SPAN=1307;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:17:2:38.3,0,2:0:13:-39.65:39.65\n11\t32369112\t582688:2\tA\t]11:32367805]A\t38\tPASS\tDISC_MAPQ=58;EVDNC=DSCRD;IMPRECISE;MAPQ=58;MATEID=582688:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=11:32367805(+)-11:32369112(-)__11_32364501_32389501D;SPAN=1307;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:17:2:38.3,0,2:0:13:-39.65:39.65\n11\t37407661\t781898:1\tT\tT[17:10235400[\t33\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;MAPQ=60;MATEID=781898:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_17_10216501_10241501_78C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:11:11:3:33,3,0:9:5:-33.01:33.01\n11\t37940512\t584524:1\tG\tG[11:37940821[\t35\tPASS\tEVDNC=ASSMB;HOMSEQ=AAGAAAATGCTTATTAG;MAPQ=60;MATEID=584524:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_37926001_37951001_124C;SPAN=309;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:27:32:35.3,0,32:13:0:-35.33:35.33\n11\t37940821\t584524:2\tA\t]11:37940512]A\t35\tPASS\tEVDNC=ASSMB;HOMSEQ=AAGAAAATGCTTATTAG;MAPQ=60;MATEID=584524:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_37926001_37951001_124C;SPAN=309;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:27:32:35.3,0,32:13:0:-35.33:35.33\n11\t38791106\t452809:2\tG\t]8:51819021]G\t82\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=452809:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=8:51819021(+)-11:38791106(-)__8_51817501_51842501D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:27:10:7.5:82.5,7.5,0:0:27:-82.52:82.52\n11\t38791187\t452806:2\tT\tT[8:51817582[\t49\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=452806:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=8:51817582(-)-11:38791187(+)__8_51817501_51842501D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:17:13:4.5:49.5,4.5,0:0:17:-49.51:49.51\n11\t39783577\t585236:1\tT\tT[11:39783900[\t64\tPASS\tEVDNC=ASSMB;HOMSEQ=CAATTTGTAATAT;MAPQ=60;MATEID=585236:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_39763501_39788501_72C;SPAN=323;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:22:30:11.3:64.1,0,11.3:22:0:-66.29:66.29\n11\t39783900\t585236:2\tC\t]11:39783577]C\t64\tPASS\tEVDNC=ASSMB;HOMSEQ=CAATTTGTAATAT;MAPQ=60;MATEID=585236:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_39763501_39788501_72C;SPAN=323;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:22:30:11.3:64.1,0,11.3:22:0:-66.29:66.29\n11\t40597161\t585534:1\tC\tC[11:40597644[\t19\tPASS\tEVDNC=ASSMB;HOMSEQ=AC;MAPQ=60;MATEID=585534:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_40596501_40621501_146C;SPAN=483;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:26:19.1:19.1,0,45.5:8:0:-19.1:19.73\n11\t40597644\t585534:2\tA\t]11:40597161]A\t19\tPASS\tEVDNC=ASSMB;HOMSEQ=AC;MAPQ=60;MATEID=585534:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_40596501_40621501_146C;SPAN=483;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:26:19.1:19.1,0,45.5:8:0:-19.1:19.73\n11\t40904857\t585625:2\tC\t]6:32320801]C\t39\tPASS\tEVDNC=ASSMB;INSERTION=G;MAPQ=60;MATEID=585625:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_40890501_40915501_5C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:12:13:3.6:39.6,3.6,0:12:0:-39.28:39.28\n11\t41140440\t585728:1\tA\t[11:41145493[A\t14\tPASS\tDISC_MAPQ=58;EVDNC=ASDIS;INSERTION=ATTCCTACTGATCCATCAGAACCAA;MAPQ=60;MATEID=585728:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_41135501_41160501_22C;SPAN=5053;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:7:33:14:14,0,66.8:6:3:-13.83:15.94\n11\t41145493\t585728:2\tA\t[11:41140440[A\t14\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;INSERTION=ATTCCTACTGATCCATCAGAACCAA;MAPQ=60;MATEID=585728:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_41135501_41160501_22C;SPAN=5053;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:7:33:14:14,0,66.8:6:3:-13.83:15.94\n11\t42248172\t586023:1\tG\tG]11:42253506]\t37\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=CCTCCTGG;MAPQ=60;MATEID=586023:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_42238001_42263001_14C;SPAN=5334;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:20:11:37.4,0,11:10:7:-37.93:37.93\n11\t42248419\t586024:1\tC\t[11:42253515[C\t34\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=C;MAPQ=60;MATEID=586024:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_42238001_42263001_9C;SPAN=5096;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:18:8.3:34.7,0,8.3:8:6:-35.24:35.24\n11\t42253506\t586023:2\tG\tG]11:42248172]\t37\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=CCTCCTGG;MAPQ=60;MATEID=586023:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_42238001_42263001_14C;SPAN=5334;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:20:11:37.4,0,11:10:7:-37.93:37.93\n11\t42253515\t586024:2\tG\t[11:42248419[G\t34\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=C;MAPQ=60;MATEID=586024:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_42238001_42263001_9C;SPAN=5096;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:18:8.3:34.7,0,8.3:8:6:-35.24:35.24\n11\t43634621\t886988:1\tT\tT[20:57463311[\t22\tPASS\tEVDNC=ASSMB;HOMSEQ=T;MAPQ=60;MATEID=886988:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_57452501_57477501_4C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:60:22.7:22.7,0,128.3:12:0:-22.75:26.98\n11\t45377756\t213057:2\tC\t[3:196591623[C\t99\tPASS\tDISC_MAPQ=13;EVDNC=ASDIS;HOMSEQ=CTCTGTCACCCAGGCTGGAGTGCAATGGCGCGATCTCGGCTCACTGCAA;MAPQ=49;MATEID=213057:1;MATENM=1;NM=2;NUMPARTS=2;SCTG=c_3_196588001_196613001_28C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:45:15:12.6:138.6,12.6,0:44:7:-138.6:138.6\n11\t45796115\t586861:1\tG\t[11:45799999[G\t58\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=C;MAPQ=60;MATEID=586861:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_11_45790501_45815501_20C;SPAN=3884;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:20:28:11.9:58.1,0,11.9:14:13:-59.83:59.83\n11\t45798229\t600590:1\tT\tT]11:86852881]\t46\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=600590:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=11:45798229(+)-11:86852881(+)__11_86852501_86877501D;SPAN=41054652;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:16:15:4.2:46.2,4.2,0:0:16:-46.21:46.21\n11\t45799999\t586861:2\tC\t[11:45796115[C\t58\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=C;MAPQ=60;MATEID=586861:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_11_45790501_45815501_20C;SPAN=3884;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:20:28:11.9:58.1,0,11.9:14:13:-59.83:59.83\n11\t46014697\t586937:1\tG\tG[11:46015032[\t51\tPASS\tEVDNC=ASSMB;HOMSEQ=AATAGTTATTCTG;MAPQ=60;MATEID=586937:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_46011001_46036001_60C;SPAN=335;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:19:39:45.2:51.8,0,45.2:19:0:-51.77:51.77\n11\t46015032\t586937:2\tA\t]11:46014697]A\t51\tPASS\tEVDNC=ASSMB;HOMSEQ=AATAGTTATTCTG;MAPQ=60;MATEID=586937:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_46011001_46036001_60C;SPAN=335;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:19:39:45.2:51.8,0,45.2:19:0:-51.77:51.77\n11\t46139466\t586977:1\tT\tT[11:46140850[\t99\tPASS\tEVDNC=ASSMB;INSERTION=GA;MAPQ=60;MATEID=586977:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_46133501_46158501_61C;SPAN=1384;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:45:25:12.6:138.6,12.6,0:45:0:-138.6:138.6\n11\t46140850\t586977:2\tA\t]11:46139466]A\t99\tPASS\tEVDNC=ASSMB;INSERTION=GA;MAPQ=60;MATEID=586977:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_46133501_46158501_61C;SPAN=1384;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:45:25:12.6:138.6,12.6,0:45:0:-138.6:138.6\n11\t46721219\t587147:1\tT\t]11:46722062]T\t52\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TTTTTAGTAGAGACGGGGTTTCACCATGTTGGCCAGGCTGGTC;MAPQ=60;MATEID=587147:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_46721501_46746501_23C;SPAN=843;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:18:18:4.8:52.8,4.8,0:11:11:-52.81:52.81\n11\t46722062\t587147:2\tC\tC[11:46721219[\t52\tPASS\tDISC_MAPQ=52;EVDNC=ASDIS;HOMSEQ=TTTTTAGTAGAGACGGGGTTTCACCATGTTGGCCAGGCTGGTC;MAPQ=60;MATEID=587147:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_46721501_46746501_23C;SPAN=843;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:18:18:4.8:52.8,4.8,0:11:11:-52.81:52.81\n11\t47638400\t587549:1\tT\tT]Un_KN707750v1_decoy:4718]\t92\tPASS\tEVDNC=ASSMB;HOMSEQ=CGTCTCTACTAAAAATACAAAAAAT;INSERTION=CCACATTAGAATTGGGGGCTATGTTAAAGCCTTAAAAAGTACACTGAGGACTGCAGGAACTGTTGCTATGTTTATATATATATGCAATTTTTTAGAGACAGGGTCTCAC;MAPQ=60;MATEID=587549:2;MATENM=0;NM=1;NUMPARTS=5;SCTG=c_11_47628001_47653001_50C;SPAN=-1;SUBN=7;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:30:19:8.4:92.4,8.4,0:30:0:-92.42:92.42\n11\t47866115\t587678:1\tT\tT[11:47866643[\t47\tPASS\tEVDNC=ASSMB;INSERTION=T;MAPQ=60;MATEID=587678:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_47848501_47873501_36C;SPAN=528;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:16:21:4.1:47,0,4.1:16:0:-48.75:48.75\n11\t47866643\t587678:2\tT\t]11:47866115]T\t47\tPASS\tEVDNC=ASSMB;INSERTION=T;MAPQ=60;MATEID=587678:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_47848501_47873501_36C;SPAN=528;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:16:21:4.1:47,0,4.1:16:0:-48.75:48.75\n11\t47893214\t587688:2\tC\tC]11:15686349]\t92\tPASS\tDISC_MAPQ=36;EVDNC=ASDIS;HOMSEQ=CCTCTGCCC;MAPQ=60;MATEID=587688:1;MATENM=3;NM=1;NUMPARTS=2;SCTG=c_11_47873001_47898001_103C;SPAN=32206865;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:31:14:8.4:92.4,8.4,0:26:5:-92.42:92.42\n11\t48098519\t587784:1\tT\tT[11:48098819[\t62\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TTTATCTCTT;MAPQ=60;MATEID=587784:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_48093501_48118501_81C;SPAN=300;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:21:21:5.7:62.7,5.7,0:15:8:-62.72:62.72\n11\t48098819\t587784:2\tT\t]11:48098519]T\t62\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TTTATCTCTT;MAPQ=60;MATEID=587784:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_48093501_48118501_81C;SPAN=300;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:21:21:5.7:62.7,5.7,0:15:8:-62.72:62.72\n11\t48425278\t587888:1\tG\tG[11:48425559[\t99\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AAAAATCAGATGGTTG;MAPQ=60;MATEID=587888:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_48412001_48437001_21C;SPAN=281;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:46:15:12.6:138.6,12.6,0:42:4:-138.6:138.6\n11\t48425559\t587888:2\tA\t]11:48425278]A\t99\tPASS\tDISC_MAPQ=58;EVDNC=ASDIS;HOMSEQ=AAAAATCAGATGGTTG;MAPQ=60;MATEID=587888:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_48412001_48437001_21C;SPAN=281;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:46:15:12.6:138.6,12.6,0:42:4:-138.6:138.6\n11\t48579306\t587957:1\tC\tC[11:48582731[\t41\tPASS\tEVDNC=ASSMB;HOMSEQ=TC;MAPQ=60;MATEID=587957:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_11_48559001_48584001_185C;SPAN=3425;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:15:31:34.4:41,0,34.4:15:0:-40.81:40.81\n11\t48582731\t587957:2\tT\t]11:48579306]T\t41\tPASS\tEVDNC=ASSMB;HOMSEQ=TC;MAPQ=60;MATEID=587957:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_11_48559001_48584001_185C;SPAN=3425;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:15:31:34.4:41,0,34.4:15:0:-40.81:40.81\n11\t48692511\t588007:1\tC\tC[11:48693522[\t47\tPASS\tEVDNC=ASSMB;HOMSEQ=AAACCTTTCTTTTCATTC;MAPQ=60;MATEID=588007:2;MATENM=1;NM=2;NUMPARTS=2;SCTG=c_11_48681501_48706501_76C;SPAN=1011;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:17:33:33.8:47,0,33.8:17:0:-46.91:46.91\n11\t48693522\t588007:2\tA\t]11:48692511]A\t47\tPASS\tEVDNC=ASSMB;HOMSEQ=AAACCTTTCTTTTCATTC;MAPQ=60;MATEID=588007:1;MATENM=2;NM=1;NUMPARTS=2;SCTG=c_11_48681501_48706501_76C;SPAN=1011;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:17:33:33.8:47,0,33.8:17:0:-46.91:46.91\n11\t48713228\t588025:1\tT\tT[11:48715397[\t82\tPASS\tDISC_MAPQ=38;EVDNC=ASDIS;HOMSEQ=TTCTCAGAAAGCTTCTTTCTAGTTTTTATTTGAAGATATTTCCTTTTT;MAPQ=60;MATEID=588025:2;MATENM=0;NM=3;NUMPARTS=2;SCTG=c_11_48706001_48731001_50C;SPAN=2169;SUBN=1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:28:36:6.5:82.4,0,6.5:10:22:-85.84:85.84\n11\t48715397\t588025:2\tT\t]11:48713228]T\t82\tPASS\tDISC_MAPQ=59;EVDNC=ASDIS;HOMSEQ=TTCTCAGAAAGCTTCTTTCTAGTTTTTATTTGAAGATATTTCCTTTTT;MAPQ=60;MATEID=588025:1;MATENM=3;NM=0;NUMPARTS=2;SCTG=c_11_48706001_48731001_50C;SPAN=2169;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:28:36:6.5:82.4,0,6.5:10:22:-85.84:85.84\n11\t48788958\t588088:1\tG\tG[11:48789585[\t99\tPASS\tDISC_MAPQ=55;EVDNC=ASDIS;HOMSEQ=ATGTGAAGATATTTCGTATTTCCCCAGAGGTCTCAATGGGCTCACAAATATCCCTTTG;MAPQ=60;MATEID=588088:2;MATENM=4;NM=5;NUMPARTS=2;SCTG=c_11_48779501_48804501_8C;SPAN=627;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:39:30:10.8:118.8,10.8,0:25:16:-118.8:118.8\n11\t48789585\t588088:2\tA\t]11:48788958]A\t99\tPASS\tDISC_MAPQ=59;EVDNC=ASDIS;HOMSEQ=ATGTGAAGATATTTCGTATTTCCCCAGAGGTCTCAATGGGCTCACAAATATCCCTTTG;MAPQ=60;MATEID=588088:1;MATENM=5;NM=4;NUMPARTS=2;SCTG=c_11_48779501_48804501_8C;SPAN=627;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:39:30:10.8:118.8,10.8,0:25:16:-118.8:118.8\n11\t48859208\t588242:1\tA\tA[11:48860190[\t99\tPASS\tDISC_MAPQ=53;EVDNC=ASDIS;HOMSEQ=TAGACAGAAGCATTCTCAGAAACGTCTTTGTGATGATTGCATTCA;MAPQ=60;MATEID=588242:2;MATENM=4;NM=3;NUMPARTS=2;SCTG=c_11_48853001_48878001_28C;SPAN=982;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:53:15:14.7:161.7,14.7,0:31:33:-161.7:161.7\n11\t48860190\t588242:2\tT\t]11:48859208]T\t99\tPASS\tDISC_MAPQ=55;EVDNC=ASDIS;HOMSEQ=TAGACAGAAGCATTCTCAGAAACGTCTTTGTGATGATTGCATTCA;MAPQ=60;MATEID=588242:1;MATENM=3;NM=4;NUMPARTS=2;SCTG=c_11_48853001_48878001_28C;SPAN=982;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:53:15:14.7:161.7,14.7,0:31:33:-161.7:161.7\n11\t49817800\t589101:1\tC\t]11:49852451]C\t22\tPASS\tDISC_MAPQ=50;EVDNC=DSCRD;IMPRECISE;MAPQ=50;MATEID=589101:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=11:49817800(-)-11:49852451(+)__11_49808501_49833501D;SPAN=34651;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:14:12.5:22.4,0,12.5:0:8:-22.62:22.62\n11\t49852451\t589101:2\tG\tG[11:49817800[\t22\tPASS\tDISC_MAPQ=56;EVDNC=DSCRD;IMPRECISE;MAPQ=56;MATEID=589101:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=11:49817800(-)-11:49852451(+)__11_49808501_49833501D;SPAN=34651;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:14:12.5:22.4,0,12.5:0:8:-22.62:22.62\n11\t50147426\t589366:1\tC\tC]11:50331713]\t36\tPASS\tDISC_MAPQ=55;EVDNC=DSCRD;IMPRECISE;MAPQ=55;MATEID=589366:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=11:50147426(+)-11:50331713(+)__11_50323001_50348001D;SPAN=184287;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:11:12:3.3:36.3,3.3,0:0:11:-35.86:35.86\n11\t50203333\t589296:1\tA\tA[11:50206864[\t36\tPASS\tEVDNC=ASSMB;HOMSEQ=GTGGCA;MAPQ=60;MATEID=589296:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_50200501_50225501_52C;SPAN=3531;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:36:36.2:36.2,0,52.7:14:0:-36.1:36.3\n11\t50206864\t589296:2\tG\t]11:50203333]G\t36\tPASS\tEVDNC=ASSMB;HOMSEQ=GTGGCA;MAPQ=60;MATEID=589296:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_50200501_50225501_52C;SPAN=3531;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:36:36.2:36.2,0,52.7:14:0:-36.1:36.3\n11\t50331713\t589366:2\tT\tT]11:50147426]\t36\tPASS\tDISC_MAPQ=58;EVDNC=DSCRD;IMPRECISE;MAPQ=58;MATEID=589366:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=11:50147426(+)-11:50331713(+)__11_50323001_50348001D;SPAN=184287;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:11:12:3.3:36.3,3.3,0:0:11:-35.86:35.86\n11\t50725179\t589562:1\tA\tA[11:50725446[\t70\tPASS\tDISC_MAPQ=43;EVDNC=ASDIS;HOMSEQ=AGA;MAPQ=50;MATEID=589562:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_50715001_50740001_108C;SPAN=267;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:24:32:7.7:70.4,0,7.7:18:8:-72.78:72.78\n11\t50725446\t589562:2\tA\t]11:50725179]A\t70\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AGA;MAPQ=60;MATEID=589562:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_50715001_50740001_108C;SPAN=267;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:24:32:7.7:70.4,0,7.7:18:8:-72.78:72.78\n11\t51090773\t589949:1\tT\t]11:52010440]T\t23\tPASS\tDISC_MAPQ=20;EVDNC=DSCRD;IMPRECISE;MAPQ=20;MATEID=589949:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=11:51090773(-)-11:52010440(+)__11_51989001_52014001D;SPAN=919667;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:8:6:2.1:23.1,2.1,0:0:8:-23.11:23.11\n11\t51148091\t589867:1\tT\tT[11:53674586[\t26\tPASS\tDISC_MAPQ=25;EVDNC=DSCRD;IMPRECISE;MAPQ=25;MATEID=589867:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=11:51148091(+)-11:53674586(-)__11_51131501_51156501D;SPAN=2526495;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:9:8:2.4:26.4,2.4,0:0:9:-26.41:26.41\n11\t51472984\t590301:1\tT\t]11:53945514]T\t26\tPASS\tDISC_MAPQ=38;EVDNC=DSCRD;IMPRECISE;MAPQ=38;MATEID=590301:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=11:51472984(-)-11:53945514(+)__11_53924501_53949501D;SPAN=2472530;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:9:5:2.4:26.4,2.4,0:0:9:-26.41:26.41\n11\t52010440\t589949:2\tT\tT[11:51090773[\t23\tPASS\tDISC_MAPQ=39;EVDNC=DSCRD;IMPRECISE;MAPQ=39;MATEID=589949:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=11:51090773(-)-11:52010440(+)__11_51989001_52014001D;SPAN=919667;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:8:6:2.1:23.1,2.1,0:0:8:-23.11:23.11\n11\t52680399\t590204:1\tC\t]11:53344504]C\t26\tPASS\tDISC_MAPQ=23;EVDNC=DSCRD;IMPRECISE;MAPQ=23;MATEID=590204:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=11:52680399(-)-11:53344504(+)__11_53336501_53361501D;SPAN=664105;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:9:5:2.4:26.4,2.4,0:0:9:-26.41:26.41\n11\t53344504\t590204:2\tA\tA[11:52680399[\t26\tPASS\tDISC_MAPQ=15;EVDNC=DSCRD;IMPRECISE;MAPQ=15;MATEID=590204:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=11:52680399(-)-11:53344504(+)__11_53336501_53361501D;SPAN=664105;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:9:5:2.4:26.4,2.4,0:0:9:-26.41:26.41\n11\t53674586\t589867:2\tT\t]11:51148091]T\t26\tPASS\tDISC_MAPQ=18;EVDNC=DSCRD;IMPRECISE;MAPQ=18;MATEID=589867:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=11:51148091(+)-11:53674586(-)__11_51131501_51156501D;SPAN=2526495;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:9:8:2.4:26.4,2.4,0:0:9:-26.41:26.41\n11\t53945514\t590301:2\tG\tG[11:51472984[\t26\tPASS\tDISC_MAPQ=41;EVDNC=DSCRD;IMPRECISE;MAPQ=41;MATEID=590301:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=11:51472984(-)-11:53945514(+)__11_53924501_53949501D;SPAN=2472530;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:9:5:2.4:26.4,2.4,0:0:9:-26.41:26.41\n11\t54345246\t590459:1\tC\t]11:54372905]C\t29\tPASS\tDISC_MAPQ=16;EVDNC=DSCRD;IMPRECISE;MAPQ=16;MATEID=590459:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=11:54345246(-)-11:54372905(+)__11_54365501_54390501D;SPAN=27659;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:10:5:2.7:29.7,2.7,0:0:10:-29.71:29.71\n11\t54347483\t590434:1\tT\tT[11:54403730[\t59\tPASS\tDISC_MAPQ=29;EVDNC=DSCRD;IMPRECISE;MAPQ=29;MATEID=590434:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=11:54347483(+)-11:54403730(-)__11_54341001_54366001D;SPAN=56247;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:19:22:2.7:59.4,2.7,0:0:19:-60.34:60.34\n11\t54347532\t590435:1\tT\tT[11:54406005[\t23\tPASS\tDISC_MAPQ=16;EVDNC=DSCRD;IMPRECISE;MAPQ=16;MATEID=590435:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=11:54347532(+)-11:54406005(-)__11_54341001_54366001D;SPAN=58473;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:8:8:2.1:23.1,2.1,0:0:8:-23.11:23.11\n11\t54369337\t590539:1\tC\tC[11:54406068[\t20\tPASS\tDISC_MAPQ=34;EVDNC=DSCRD;IMPRECISE;MAPQ=34;MATEID=590539:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=11:54369337(+)-11:54406068(-)__11_54390001_54415001D;SPAN=36731;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:21:20.6:20.6,0,30.5:0:8:-20.51:20.65\n11\t54372905\t590459:2\tA\tA[11:54345246[\t29\tPASS\tDISC_MAPQ=16;EVDNC=DSCRD;IMPRECISE;MAPQ=16;MATEID=590459:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=11:54345246(-)-11:54372905(+)__11_54365501_54390501D;SPAN=27659;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:10:5:2.7:29.7,2.7,0:0:10:-29.71:29.71\n11\t54374313\t590545:1\tT\tT[11:54409169[\t39\tPASS\tDISC_MAPQ=38;EVDNC=DSCRD;IMPRECISE;MAPQ=38;MATEID=590545:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=11:54374313(+)-11:54409169(-)__11_54390001_54415001D;SPAN=34856;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:13:7:3.6:39.6,3.6,0:0:13:-39.61:39.61\n11\t54374525\t590490:1\tG\t]11:54421527]G\t21\tPASS\tDISC_MAPQ=22;EVDNC=DSCRD;IMPRECISE;MAPQ=22;MATEID=590490:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=11:54374525(-)-11:54421527(+)__11_54365501_54390501D;SPAN=47002;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:30:21.2:21.2,0,54.2:0:9:-21.28:22.07\n11\t54403730\t590434:2\tT\t]11:54347483]T\t59\tPASS\tDISC_MAPQ=52;EVDNC=DSCRD;IMPRECISE;MAPQ=52;MATEID=590434:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=11:54347483(+)-11:54403730(-)__11_54341001_54366001D;SPAN=56247;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:19:22:2.7:59.4,2.7,0:0:19:-60.34:60.34\n11\t54406005\t590435:2\tT\t]11:54347532]T\t23\tPASS\tDISC_MAPQ=19;EVDNC=DSCRD;IMPRECISE;MAPQ=19;MATEID=590435:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=11:54347532(+)-11:54406005(-)__11_54341001_54366001D;SPAN=58473;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:8:8:2.1:23.1,2.1,0:0:8:-23.11:23.11\n11\t54406068\t590539:2\tA\t]11:54369337]A\t20\tPASS\tDISC_MAPQ=29;EVDNC=DSCRD;IMPRECISE;MAPQ=29;MATEID=590539:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=11:54369337(+)-11:54406068(-)__11_54390001_54415001D;SPAN=36731;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:21:20.6:20.6,0,30.5:0:8:-20.51:20.65\n11\t54409169\t590545:2\tT\t]11:54374313]T\t39\tPASS\tDISC_MAPQ=22;EVDNC=DSCRD;IMPRECISE;MAPQ=22;MATEID=590545:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=11:54374313(+)-11:54409169(-)__11_54390001_54415001D;SPAN=34856;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:13:7:3.6:39.6,3.6,0:0:13:-39.61:39.61\n11\t54415654\t590614:1\tC\t]11:54549099]C\t19\tPASS\tDISC_MAPQ=50;EVDNC=DSCRD;IMPRECISE;MAPQ=50;MATEID=590614:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=11:54415654(-)-11:54549099(+)__11_54537001_54562001D;SPAN=133445;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:37:19.4:19.4,0,72.2:0:9:-19.31:21.11\n11\t54421527\t590490:2\tT\tT[11:54374525[\t21\tPASS\tDISC_MAPQ=26;EVDNC=DSCRD;IMPRECISE;MAPQ=26;MATEID=590490:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=11:54374525(-)-11:54421527(+)__11_54365501_54390501D;SPAN=47002;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:30:21.2:21.2,0,54.2:0:9:-21.28:22.07\n11\t54544141\t590639:1\tA\tA[11:54548140[\t69\tPASS\tDISC_MAPQ=41;EVDNC=DSCRD;IMPRECISE;MAPQ=41;MATEID=590639:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=11:54544141(+)-11:54548140(-)__11_54537001_54562001D;SPAN=3999;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:22:25:3.6:69.3,3.6,0:0:22:-70.38:70.38\n11\t54548140\t590639:2\tT\t]11:54544141]T\t69\tPASS\tDISC_MAPQ=35;EVDNC=DSCRD;IMPRECISE;MAPQ=35;MATEID=590639:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=11:54544141(+)-11:54548140(-)__11_54537001_54562001D;SPAN=3999;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:22:25:3.6:69.3,3.6,0:0:22:-70.38:70.38\n11\t54549099\t590614:2\tA\tA[11:54415654[\t19\tPASS\tDISC_MAPQ=54;EVDNC=DSCRD;IMPRECISE;MAPQ=54;MATEID=590614:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=11:54415654(-)-11:54549099(+)__11_54537001_54562001D;SPAN=133445;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:37:19.4:19.4,0,72.2:0:9:-19.31:21.11\n11\t54929760\t590741:1\tC\t]11:54937289]C\t70\tPASS\tDISC_MAPQ=59;EVDNC=ASDIS;HOMSEQ=CAGATTCTACAACAACAGTGTTTCCAAAC;MAPQ=60;MATEID=590741:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_11_54929001_54954001_5C;SPAN=7529;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:24:31:4.7:70.7,0,4.7:16:14:-73.47:73.47\n11\t54937289\t590741:2\tC\tC[11:54929760[\t70\tPASS\tDISC_MAPQ=59;EVDNC=ASDIS;HOMSEQ=CAGATTCTACAACAACAGTGTTTCCAAAC;MAPQ=60;MATEID=590741:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_11_54929001_54954001_5C;SPAN=7529;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:24:31:4.7:70.7,0,4.7:16:14:-73.47:73.47\n11\t55239601\t590830:1\tT\tT[11:55239896[\t72\tPASS\tDISC_MAPQ=58;EVDNC=ASDIS;HOMSEQ=AAGTGGATATTTGGAGTGCTTTGAGGCCTATGGTGGAAAAGGAAATAT;MAPQ=60;MATEID=590830:2;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_11_55223001_55248001_52C;SPAN=295;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:24:17:6.6:72.6,6.6,0:16:9:-72.62:72.62\n11\t55239896\t590830:2\tA\t]11:55239601]A\t72\tPASS\tDISC_MAPQ=52;EVDNC=ASDIS;HOMSEQ=AAGTGGATATTTGGAGTGCTTTGAGGCCTATGGTGGAAAAGGAAATAT;MAPQ=60;MATEID=590830:1;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_11_55223001_55248001_52C;SPAN=295;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:24:17:6.6:72.6,6.6,0:16:9:-72.62:72.62\n11\t56497246\t608067:1\tG\t[11:117255064[G\t41\tPASS\tDISC_MAPQ=55;EVDNC=ASDIS;HOMSEQ=C;MAPQ=60;MATEID=608067:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_117232501_117257501_23C;SPAN=60757818;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:18:1.7:41.3,0,1.7:8:11:-42.92:42.92\n11\t58434792\t591564:1\tT\t]11:58456014]T\t30\tPASS\tDISC_MAPQ=29;EVDNC=ASDIS;INSERTION=GAGTTCAAGACCAGCTTGAAC;MAPQ=60;MATEID=591564:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_58432501_58457501_0C;SPAN=21222;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:20:17.6:30.8,0,17.6:9:7:-30.82:30.82\n11\t58456014\t591564:2\tG\tG[11:58434792[\t30\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;INSERTION=GAGTTCAAGACCAGCTTGAAC;MAPQ=60;MATEID=591564:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_58432501_58457501_0C;SPAN=21222;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:20:17.6:30.8,0,17.6:9:7:-30.82:30.82\n11\t58826715\t591625:1\tT\tT[11:58828547[\t46\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=591625:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_11_58824501_58849501_2C;SPAN=1832;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:15:8:4.2:46.2,4.2,0:15:0:-46.21:46.21\n11\t58828547\t591625:2\tT\t]11:58826715]T\t46\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=591625:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_11_58824501_58849501_2C;SPAN=1832;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:15:8:4.2:46.2,4.2,0:15:0:-46.21:46.21\n11\t59041829\t591672:1\tA\tA[11:59042145[\t75\tPASS\tDISC_MAPQ=54;EVDNC=ASDIS;HOMSEQ=AAGAATTCCAAGTGTTA;MAPQ=60;MATEID=591672:2;MATENM=5;NM=0;NUMPARTS=2;SCTG=c_11_59020501_59045501_5C;SPAN=316;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:25:8:6.9:75.9,6.9,0:21:5:-75.92:75.92\n11\t59042145\t591672:2\tA\t]11:59041829]A\t75\tPASS\tDISC_MAPQ=58;EVDNC=ASDIS;HOMSEQ=AAGAATTCCAAGTGTTA;MAPQ=60;MATEID=591672:1;MATENM=0;NM=5;NUMPARTS=2;SCTG=c_11_59020501_59045501_5C;SPAN=316;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:25:8:6.9:75.9,6.9,0:21:5:-75.92:75.92\n11\t59681933\t591775:2\tG\t[1:113684515[G\t46\tPASS\tDISC_MAPQ=59;EVDNC=ASDIS;MAPQ=60;MATEID=591775:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_59682001_59707001_10C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:16:6:4.2:46.2,4.2,0:8:13:-46.21:46.21\n11\t60986887\t592149:1\tG\t]11:60990806]G\t35\tPASS\tDISC_MAPQ=3;EVDNC=TSI_L;HOMSEQ=GGA;MAPQ=14;MATEID=592149:2;MATENM=0;NM=0;NUMPARTS=3;SCTG=c_11_60980501_61005501_89C;SPAN=3919;SUBN=1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:25:26:35.9,0,26:13:4:-35.95:35.95\n11\t60990806\t592149:2\tA\tA[11:60986887[\t35\tPASS\tDISC_MAPQ=60;EVDNC=TSI_L;HOMSEQ=GGA;MAPQ=60;MATEID=592149:1;MATENM=0;NM=0;NUMPARTS=3;SCTG=c_11_60980501_61005501_89C;SPAN=3919;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:25:26:35.9,0,26:13:4:-35.95:35.95\n11\t62009715\t592412:1\tC\t]11:62010599]C\t31\tPASS\tDISC_MAPQ=58;EVDNC=DSCRD;IMPRECISE;MAPQ=58;MATEID=592412:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=11:62009715(-)-11:62010599(+)__11_62009501_62034501D;SPAN=884;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:18:11.6:31.4,0,11.6:0:11:-31.6:31.6\n11\t62010599\t592412:2\tG\tG[11:62009715[\t31\tPASS\tDISC_MAPQ=56;EVDNC=DSCRD;IMPRECISE;MAPQ=56;MATEID=592412:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=11:62009715(-)-11:62010599(+)__11_62009501_62034501D;SPAN=884;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:18:11.6:31.4,0,11.6:0:11:-31.6:31.6\n11\t62074341\t592458:1\tG\tG[14:81320430[\t99\tPASS\tEVDNC=ASSMB;INSERTION=C;MAPQ=60;MATEID=592458:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_62058501_62083501_23C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:33:31:9:99,9,0:33:0:-99.02:99.02\n11\t62143053\t592515:1\tC\t]11:62143188]C\t25\tPASS\tEVDNC=ASSMB;HOMSEQ=CCACACTTTTGGGATCACAGCTCCTCC;MAPQ=60;MATEID=592515:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_62132001_62157001_20C;SPAN=135;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:39:25.4:25.4,0,71.6:11:0:-25.35:26.63\n11\t62143188\t592515:2\tC\tC[11:62143053[\t25\tPASS\tEVDNC=ASSMB;HOMSEQ=CCACACTTTTGGGATCACAGCTCCTCC;MAPQ=60;MATEID=592515:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_62132001_62157001_20C;SPAN=135;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:39:25.4:25.4,0,71.6:11:0:-25.35:26.63\n11\t62177315\t592530:1\tA\tA[11:62177614[\t56\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=592530:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_62156501_62181501_84C;SPAN=299;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:19:24:3.2:56,0,3.2:19:0:-58.57:58.57\n11\t62177614\t592530:2\tT\t]11:62177315]T\t56\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=592530:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_62156501_62181501_84C;SPAN=299;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:19:24:3.2:56,0,3.2:19:0:-58.57:58.57\n11\t63559621\t592884:1\tA\tA[Un_KN707705v1_decoy:1[\t48\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=592884:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_63553001_63578001_31C;SPAN=-1;SUBN=1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:17:26:15.8:48.8,0,15.8:17:0:-49.68:49.68\n11\t63559621\t988237:1\tA\tA[Un_KN707705v1_decoy:1[\t42\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=988237:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_556_1_4632_0C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:14:4:3.9:42.9,3.9,0:14:0:-42.91:42.91\n11\t63931435\t592993:1\tC\t]11:63934472]C\t99\tPASS\tEVDNC=ASSMB;INSERTION=TCAGGGTACAAAAGGT;MAPQ=60;MATEID=592993:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_63920501_63945501_26C;SPAN=3037;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:36:34:9.9:108.9,9.9,0:36:0:-108.9:108.9\n11\t63931437\t592994:1\tG\tG[11:63934182[\t80\tPASS\tEVDNC=ASSMB;HOMSEQ=G;MAPQ=60;MATEID=592994:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_11_63920501_63945501_50C;SPAN=2745;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:28:41:21.5:80.9,0,21.5:28:0:-82.75:82.75\n11\t63934182\t592994:2\tG\t]11:63931437]G\t80\tPASS\tEVDNC=ASSMB;HOMSEQ=G;MAPQ=60;MATEID=592994:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_11_63920501_63945501_50C;SPAN=2745;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:28:41:21.5:80.9,0,21.5:28:0:-82.75:82.75\n11\t63934472\t592993:2\tG\tG[11:63931435[\t99\tPASS\tEVDNC=ASSMB;INSERTION=TCAGGGTACAAAAGGT;MAPQ=60;MATEID=592993:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_63920501_63945501_26C;SPAN=3037;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:36:34:9.9:108.9,9.9,0:36:0:-108.9:108.9\n11\t65426022\t593388:1\tA\tA[11:65426240[\t22\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=593388:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_65415001_65440001_11C;SPAN=218;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:37:22.7:22.7,0,68.9:10:0:-22.61:23.99\n11\t65426240\t593388:2\tT\t]11:65426022]T\t22\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=593388:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_65415001_65440001_11C;SPAN=218;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:37:22.7:22.7,0,68.9:10:0:-22.61:23.99\n11\t65440194\t593780:1\tC\t]11:66536950]C\t32\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=CT;MAPQ=60;MATEID=593780:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_66517501_66542501_11C;SPAN=1096756;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:16:5.6:32,0,5.6:8:6:-32.57:32.57\n11\t65874744\t593571:1\tA\tA[11:65876048[\t99\tPASS\tDISC_MAPQ=57;EVDNC=DSCRD;IMPRECISE;MAPQ=57;MATEID=593571:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=11:65874744(+)-11:65876048(-)__11_65856001_65881001D;SPAN=1304;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:39:6:10.8:118.8,10.8,0:0:39:-118.8:118.8\n11\t65876048\t593571:2\tT\t]11:65874744]T\t99\tPASS\tDISC_MAPQ=56;EVDNC=DSCRD;IMPRECISE;MAPQ=56;MATEID=593571:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=11:65874744(+)-11:65876048(-)__11_65856001_65881001D;SPAN=1304;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:39:6:10.8:118.8,10.8,0:0:39:-118.8:118.8\n11\t66251221\t593686:1\tG\tG]11:66252427]\t33\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=CCATGCCCGGC;MAPQ=60;MATEID=593686:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_11_66248001_66273001_58C;SPAN=1206;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:34:33.5:33.5,0,50:10:4:-33.36:33.58\n11\t66251586\t593687:1\tA\t[11:66252433[A\t28\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AACATGGTGAAACCCCGTCTCTACTAAAAATACAAAA;MAPQ=60;MATEID=593687:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_66248001_66273001_48C;SPAN=847;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:29:28.1:28.1,0,44.6:4:8:-28.16:28.37\n11\t66252427\t593686:2\tC\tC]11:66251221]\t33\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=CCATGCCCGGC;MAPQ=60;MATEID=593686:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_11_66248001_66273001_58C;SPAN=1206;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:34:33.5:33.5,0,50:10:4:-33.36:33.58\n11\t66252433\t593687:2\tT\t[11:66251586[T\t28\tPASS\tDISC_MAPQ=52;EVDNC=ASDIS;HOMSEQ=AACATGGTGAAACCCCGTCTCTACTAAAAATACAAAA;MAPQ=60;MATEID=593687:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_66248001_66273001_48C;SPAN=847;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:29:28.1:28.1,0,44.6:4:8:-28.16:28.37\n11\t66496959\t716565:1\tG\t[14:103842390[G\t34\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=GGAGG;MAPQ=60;MATEID=716565:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_103831001_103856001_0C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:20:14.3:34.1,0,14.3:10:5:-34.32:34.32\n11\t66501326\t716602:1\tC\tC]14:103910481]\t33\tPASS\tDISC_MAPQ=51;EVDNC=ASDIS;HOMSEQ=G;MAPQ=60;MATEID=716602:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_103904501_103929501_1C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:21:17.3:33.8,0,17.3:8:6:-33.92:33.92\n11\t66536950\t593780:2\tT\tT[11:65440194[\t32\tPASS\tDISC_MAPQ=56;EVDNC=ASDIS;HOMSEQ=CT;MAPQ=60;MATEID=593780:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_66517501_66542501_11C;SPAN=1096756;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:16:5.6:32,0,5.6:8:6:-32.57:32.57\n11\t66609733\t707094:1\tT\t]14:77757579]T\t20\tPASS\tDISC_MAPQ=51;EVDNC=DSCRD;IMPRECISE;MAPQ=51;MATEID=707094:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=11:66609733(-)-14:77757579(+)__14_77738501_77763501D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:20:20.9:20.9,0,27.5:0:8:-20.79:20.87\n11\t66985273\t593887:1\tC\t]11:67081007]C\t33\tPASS\tDISC_MAPQ=52;EVDNC=ASDIS;INSERTION=TCA;MAPQ=60;MATEID=593887:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_67056501_67081501_1C;SPAN=95734;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:11:9:3:33,3,0:7:8:-33.01:33.01\n11\t67081007\t593887:2\tT\tT[11:66985273[\t33\tPASS\tDISC_MAPQ=54;EVDNC=ASDIS;INSERTION=TCA;MAPQ=30;MATEID=593887:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_67056501_67081501_1C;SPAN=95734;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:11:9:3:33,3,0:7:8:-33.01:33.01\n11\t67233499\t593930:1\tA\tA[Un_JTFH01000424v1_decoy:1[\t82\tPASS\tEVDNC=ASSMB;HOMSEQ=ACGTCTCTACTAAAAATACAA;MAPQ=60;MATEID=593930:2;MATENM=0;NM=1;NUMPARTS=3;SCTG=c_11_67228001_67253001_41C;SECONDARY;SPAN=-1;SUBN=1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:27:10:7.5:82.5,7.5,0:27:0:-82.52:82.52\n11\t68515146\t594493:1\tC\t]11:68643930]C\t19\tPASS\tDISC_MAPQ=40;EVDNC=DSCRD;IMPRECISE;MAPQ=40;MATEID=594493:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=11:68515146(-)-11:68643930(+)__11_68624501_68649501D;SPAN=128784;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:24:19.7:19.7,0,39.5:0:8:-19.66:20.07\n11\t68515404\t594495:1\tA\tA[11:68644342[\t21\tPASS\tDISC_MAPQ=42;EVDNC=DSCRD;IMPRECISE;MAPQ=42;MATEID=594495:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=11:68515404(+)-11:68644342(-)__11_68624501_68649501D;SPAN=128938;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:19:21.2:21.2,0,24.5:0:8:-21.07:21.11\n11\t68643930\t594493:2\tG\tG[11:68515146[\t19\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=594493:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=11:68515146(-)-11:68643930(+)__11_68624501_68649501D;SPAN=128784;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:24:19.7:19.7,0,39.5:0:8:-19.66:20.07\n11\t68644342\t594495:2\tT\t]11:68515404]T\t21\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=594495:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=11:68515404(+)-11:68644342(-)__11_68624501_68649501D;SPAN=128938;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:19:21.2:21.2,0,24.5:0:8:-21.07:21.11\n11\t70136449\t595239:1\tC\tC[11:70138382[\t45\tPASS\tEVDNC=ASSMB;HOMSEQ=CTC;MAPQ=60;MATEID=595239:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_70119001_70144001_87C;SPAN=1933;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:16:25:16.1:45.8,0,16.1:16:0:-46.5:46.5\n11\t70138382\t595239:2\tC\t]11:70136449]C\t45\tPASS\tEVDNC=ASSMB;HOMSEQ=CTC;MAPQ=60;MATEID=595239:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_70119001_70144001_87C;SPAN=1933;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:16:25:16.1:45.8,0,16.1:16:0:-46.5:46.5\n11\t71600176\t595839:1\tT\t]11:71900157]T\t26\tPASS\tDISC_MAPQ=39;EVDNC=DSCRD;IMPRECISE;MAPQ=39;MATEID=595839:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=11:71600176(-)-11:71900157(+)__11_71589001_71614001D;SPAN=299981;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:23:26.6:26.6,0,29.9:0:10:-26.55:26.57\n11\t71900157\t595839:2\tC\tC[11:71600176[\t26\tPASS\tDISC_MAPQ=29;EVDNC=DSCRD;IMPRECISE;MAPQ=29;MATEID=595839:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=11:71600176(-)-11:71900157(+)__11_71589001_71614001D;SPAN=299981;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:23:26.6:26.6,0,29.9:0:10:-26.55:26.57\n11\t72150565\t596054:1\tT\tT[11:72150869[\t99\tPASS\tEVDNC=ASSMB;HOMSEQ=TACTGAATTGTT;MAPQ=60;MATEID=596054:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_72128001_72153001_76C;SPAN=304;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:48:29:13.2:145.2,13.2,0:48:0:-145.2:145.2\n11\t72150869\t596054:2\tT\t]11:72150565]T\t99\tPASS\tEVDNC=ASSMB;HOMSEQ=TACTGAATTGTT;MAPQ=60;MATEID=596054:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_72128001_72153001_76C;SPAN=304;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:48:29:13.2:145.2,13.2,0:48:0:-145.2:145.2\n11\t73967021\t608936:1\tT\t[11:119253540[T\t99\tPASS\tDISC_MAPQ=2;EVDNC=TSI_L;INSERTION=CATGCACCACCACACCCAGCTAA;MAPQ=60;MATEID=608936:2;MATENM=0;NM=2;NUMPARTS=3;REPSEQ=TTT;SCTG=c_11_119241501_119266501_36C;SPAN=45286519;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:41:15:11.4:125.4,11.4,0:37:7:-125.4:125.4\n11\t73998981\t596583:1\tG\t]11:73999180]G\t68\tPASS\tEVDNC=ASSMB;HOMSEQ=GTGCAGTGGTGT;MAPQ=60;MATEID=596583:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_11_73990001_74015001_13C;SPAN=199;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:27:73:68.6:68.6,0,114.8:27:0:-68.61:69.25\n11\t73999180\t596583:2\tT\tT[11:73998981[\t68\tPASS\tEVDNC=ASSMB;HOMSEQ=GTGCAGTGGTGT;MAPQ=60;MATEID=596583:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_11_73990001_74015001_13C;SPAN=199;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:27:73:68.6:68.6,0,114.8:27:0:-68.61:69.25\n11\t74821378\t596838:1\tG\tG[11:74821679[\t68\tPASS\tEVDNC=ASSMB;HOMSEQ=AAAAGAATACAAGTGCGGG;MAPQ=60;MATEID=596838:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_74798501_74823501_57C;SPAN=301;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:23:28:2:68,0,2:23:0:-71.75:71.75\n11\t74821679\t596838:2\tA\t]11:74821378]A\t68\tPASS\tEVDNC=ASSMB;HOMSEQ=AAAAGAATACAAGTGCGGG;MAPQ=60;MATEID=596838:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_74798501_74823501_57C;SPAN=301;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:23:28:2:68,0,2:23:0:-71.75:71.75\n11\t75259137\t596962:1\tC\tC[11:75259412[\t3\tPASS\tEVDNC=ASSMB;HOMSEQ=TTGCAGTGAGCCGAGATCGCGCC;MAPQ=60;MATEID=596962:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_75239501_75264501_20C;SPAN=275;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:5:47:3.5:3.5,0,112.4:5:0:-3.294:9.753\n11\t75259412\t596962:2\tT\t]11:75259137]T\t3\tPASS\tEVDNC=ASSMB;HOMSEQ=TTGCAGTGAGCCGAGATCGCGCC;MAPQ=60;MATEID=596962:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_75239501_75264501_20C;SPAN=275;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:5:47:3.5:3.5,0,112.4:5:0:-3.294:9.753\n11\t75299453\t597034:1\tA\t]11:75426606]A\t38\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AAA;MAPQ=60;MATEID=597034:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_75411001_75436001_53C;SPAN=127153;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:27:28.7:38.6,0,28.7:9:11:-38.69:38.69\n11\t75426606\t597034:2\tA\tA[11:75299453[\t38\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AAA;MAPQ=60;MATEID=597034:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_75411001_75436001_53C;SPAN=127153;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:27:28.7:38.6,0,28.7:9:11:-38.69:38.69\n11\t75857851\t597159:1\tT\t]11:75857976]T\t19\tPASS\tEVDNC=ASSMB;HOMSEQ=T;MAPQ=60;MATEID=597159:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_75852001_75877001_15C;SPAN=125;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:50:19.1:19.1,0,104.9:10:0:-18.96:22.48\n11\t75857976\t597159:2\tT\tT[11:75857851[\t19\tPASS\tEVDNC=ASSMB;HOMSEQ=T;MAPQ=60;MATEID=597159:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_75852001_75877001_15C;SPAN=125;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:50:19.1:19.1,0,104.9:10:0:-18.96:22.48\n11\t76704166\t597476:1\tA\t]11:76896079]A\t13\tPASS\tEVDNC=ASSMB;INSERTION=GTCACGGGGA;MAPQ=60;MATEID=597476:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_76881001_76906001_31C;SPAN=191913;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:7:34:13.7:13.7,0,69.8:7:0:-13.55:15.84\n11\t76896079\t597476:2\tT\tT[11:76704166[\t13\tPASS\tEVDNC=ASSMB;INSERTION=GTCACGGGGA;MAPQ=60;MATEID=597476:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_76881001_76906001_31C;SPAN=191913;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:7:34:13.7:13.7,0,69.8:7:0:-13.55:15.84\n11\t78154046\t153237:2\tA\tA]3:10636914]\t37\tPASS\tDISC_MAPQ=55;EVDNC=ASDIS;INSERTION=AAA;MAPQ=60;MATEID=153237:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_10633001_10658001_4C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:21:14:37.1,0,14:10:4:-37.47:37.47\n11\t79416445\t598284:1\tA\t]11:79479471]A\t36\tPASS\tDISC_MAPQ=55;EVDNC=ASDIS;INSERTION=ATTTTCTTTA;MAPQ=60;MATEID=598284:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_79478001_79503001_20C;SPAN=63026;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:23:20:36.5,0,20:4:10:-36.66:36.66\n11\t79479471\t598284:2\tA\tA[11:79416445[\t36\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;INSERTION=ATTTTCTTTA;MAPQ=60;MATEID=598284:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_79478001_79503001_20C;SPAN=63026;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:23:20:36.5,0,20:4:10:-36.66:36.66\n11\t85506446\t600483:1\tT\t[11:86544042[T\t56\tPASS\tDISC_MAPQ=51;EVDNC=ASDIS;HOMSEQ=TTTATTTCTGCCTTTATTTCATTATGTACCCAGTAATCATTCAGGAG;MAPQ=60;MATEID=600483:2;MATENM=2;NM=1;NUMPARTS=2;SCTG=c_11_86534001_86559001_130C;SPAN=1037596;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:19:15:5.1:56.1,5.1,0:15:5:-56.11:56.11\n11\t85506693\t600484:1\tG\tG]11:86543942]\t35\tPASS\tDISC_MAPQ=53;EVDNC=DSCRD;IMPRECISE;MAPQ=53;MATEID=600484:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=11:85506693(+)-11:86543942(+)__11_86534001_86559001D;SPAN=1037249;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:17:5.3:35,0,5.3:0:12:-35.78:35.78\n11\t86543942\t600484:2\tC\tC]11:85506693]\t35\tPASS\tDISC_MAPQ=53;EVDNC=DSCRD;IMPRECISE;MAPQ=53;MATEID=600484:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=11:85506693(+)-11:86543942(+)__11_86534001_86559001D;SPAN=1037249;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:17:5.3:35,0,5.3:0:12:-35.78:35.78\n11\t86544042\t600483:2\tC\t[11:85506446[C\t56\tPASS\tDISC_MAPQ=56;EVDNC=ASDIS;HOMSEQ=TTTATTTCTGCCTTTATTTCATTATGTACCCAGTAATCATTCAGGAG;MAPQ=60;MATEID=600483:1;MATENM=1;NM=2;NUMPARTS=2;SCTG=c_11_86534001_86559001_130C;SPAN=1037596;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:19:15:5.1:56.1,5.1,0:15:5:-56.11:56.11\n11\t86686540\t600538:2\tA\tA[4:130410267[\t30\tPASS\tDISC_MAPQ=43;EVDNC=DSCRD;IMPRECISE;MAPQ=43;MATEID=600538:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=4:130410267(-)-11:86686540(+)__11_86681001_86706001D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:22:23.6:30.2,0,23.6:0:11:-30.15:30.15\n11\t86852881\t600590:2\tT\tT]11:45798229]\t46\tPASS\tDISC_MAPQ=48;EVDNC=DSCRD;IMPRECISE;MAPQ=48;MATEID=600590:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=11:45798229(+)-11:86852881(+)__11_86852501_86877501D;SPAN=41054652;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:16:15:4.2:46.2,4.2,0:0:16:-46.21:46.21\n11\t90222202\t601482:1\tA\t]11:90222426]A\t8\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=601482:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_90209001_90234001_9C;SPAN=224;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:5:29:8.3:8.3,0,64.4:5:0:-8.353:10.88\n11\t90222426\t601482:2\tA\tA[11:90222202[\t8\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=601482:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_90209001_90234001_9C;SPAN=224;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:5:29:8.3:8.3,0,64.4:5:0:-8.353:10.88\n11\t91132847\t601769:1\tT\tT[11:91134495[\t39\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;INSERTION=TTAAAATATTTAAAAACATTTAAA;MAPQ=60;MATEID=601769:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_11_91115501_91140501_2C;SPAN=1648;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:13:16:0.9:39.6,0.9,0:8:7:-40.41:40.41\n11\t91134495\t601769:2\tA\t]11:91132847]A\t39\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;INSERTION=TTAAAATATTTAAAAACATTTAAA;MAPQ=60;MATEID=601769:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_11_91115501_91140501_2C;SPAN=1648;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:13:16:0.9:39.6,0.9,0:8:7:-40.41:40.41\n11\t92076576\t601925:1\tG\t]11:92094632]G\t22\tPASS\tDISC_MAPQ=42;EVDNC=DSCRD;IMPRECISE;MAPQ=42;MATEID=601925:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=11:92076576(-)-11:92094632(+)__11_92071001_92096001D;SPAN=18056;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:15:15.5:22.1,0,15.5:0:8:-22.25:22.25\n11\t92094632\t601925:2\tA\tA[11:92076576[\t22\tPASS\tDISC_MAPQ=31;EVDNC=DSCRD;IMPRECISE;MAPQ=31;MATEID=601925:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=11:92076576(-)-11:92094632(+)__11_92071001_92096001D;SPAN=18056;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:15:15.5:22.1,0,15.5:0:8:-22.25:22.25\n11\t92329739\t601999:1\tA\tA]Un_JTFH01000460v1_decoy:1678]\t33\tPASS\tEVDNC=ASSMB;HOMSEQ=TTTTTATTTAATAAGAGCTCTTTATTTTTAGGGA;MAPQ=60;MATEID=601999:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_11_92316001_92341001_4C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:11:8:3:33,3,0:11:0:-33.01:33.01\n11\t92329739\t601998:1\tA\t[Un_KN707678v1_decoy:1[A\t46\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=601998:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_92316001_92341001_7C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:16:8:4.2:46.2,4.2,0:16:0:-46.21:46.21\n11\t93288079\t602178:1\tT\tT[11:93288986[\t42\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=602178:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=11:93288079(+)-11:93288986(-)__11_93271501_93296501D;SPAN=907;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:14:1:3.9:42.9,3.9,0:0:14:-42.91:42.91\n11\t93288986\t602178:2\tA\t]11:93288079]A\t42\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=602178:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=11:93288079(+)-11:93288986(-)__11_93271501_93296501D;SPAN=907;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:14:1:3.9:42.9,3.9,0:0:14:-42.91:42.91\n11\t93946078\t602374:1\tT\tT[11:93948258[\t79\tPASS\tEVDNC=ASSMB;HOMSEQ=GCCTGTTGGATTCTT;MAPQ=60;MATEID=602374:2;MATENM=6;NM=6;NUMPARTS=2;SCTG=c_11_93933001_93958001_7C;SPAN=2180;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:26:20:7.2:79.2,7.2,0:26:0:-79.22:79.22\n11\t93948258\t602374:2\tG\t]11:93946078]G\t79\tPASS\tEVDNC=ASSMB;HOMSEQ=GCCTGTTGGATTCTT;MAPQ=60;MATEID=602374:1;MATENM=6;NM=6;NUMPARTS=2;SCTG=c_11_93933001_93958001_7C;SPAN=2180;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:26:20:7.2:79.2,7.2,0:26:0:-79.22:79.22\n11\t94734090\t602559:1\tT\t]11:94920235]T\t29\tPASS\tEVDNC=ASSMB;INSERTION=ATGAA;MAPQ=60;MATEID=602559:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_94913001_94938001_11C;SPAN=186145;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:13:2.9:29.3,0,2.9:10:0:-30.55:30.55\n11\t94893362\t602552:1\tC\tC[11:94897268[\t20\tPASS\tEVDNC=ASSMB;INSERTION=CAAA;MAPQ=60;MATEID=602552:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_94888501_94913501_5C;SPAN=3906;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:33:20.6:20.6,0,60.2:9:0:-20.43:21.63\n11\t94897268\t602552:2\tT\t]11:94893362]T\t20\tPASS\tEVDNC=ASSMB;INSERTION=CAAA;MAPQ=60;MATEID=602552:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_94888501_94913501_5C;SPAN=3906;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:33:20.6:20.6,0,60.2:9:0:-20.43:21.63\n11\t94920235\t602559:2\tA\tA[11:94734090[\t29\tPASS\tEVDNC=ASSMB;INSERTION=ATGAA;MAPQ=60;MATEID=602559:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_94913001_94938001_11C;SPAN=186145;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:13:2.9:29.3,0,2.9:10:0:-30.55:30.55\n11\t95633480\t602711:1\tG\tG]11:95634028]\t37\tPASS\tEVDNC=ASSMB;INSERTION=TATACTCAA;MAPQ=60;MATEID=602711:2;MATENM=2;NM=2;NUMPARTS=2;SCTG=c_11_95623501_95648501_10C;SPAN=548;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:20:11:37.4,0,11:13:0:-37.93:37.93\n11\t95634028\t602711:2\tA\tA]11:95633480]\t37\tPASS\tEVDNC=ASSMB;INSERTION=TATACTCAA;MAPQ=60;MATEID=602711:1;MATENM=2;NM=2;NUMPARTS=2;SCTG=c_11_95623501_95648501_10C;SPAN=548;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:20:11:37.4,0,11:13:0:-37.93:37.93\n11\t96004715\t602819:2\tT\t[1:106943617[T\t66\tPASS\tDISC_MAPQ=59;EVDNC=ASDIS;MAPQ=60;MATEID=602819:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_95991001_96016001_14C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:22:12:6:66,6,0:18:14:-66.02:66.02\n11\t99733408\t603835:2\tC\t[5:149173741[C\t42\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=G;MAPQ=60;MATEID=603835:1;MATENM=0;NM=13;NUMPARTS=2;SCTG=c_11_99715001_99740001_7C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:14:5:3.9:42.9,3.9,0:9:6:-42.91:42.91\n11\t99819848\t603886:1\tA\tA]11:99820649]\t81\tPASS\tDISC_MAPQ=58;EVDNC=DSCRD;IMPRECISE;MAPQ=58;MATEID=603886:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=11:99819848(+)-11:99820649(+)__11_99813001_99838001D;SPAN=801;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:28:39:15.5:81.5,0,15.5:0:28:-83.87:83.87\n11\t99820649\t603886:2\tA\tA]11:99819848]\t81\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=603886:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=11:99819848(+)-11:99820649(+)__11_99813001_99838001D;SPAN=801;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:28:39:15.5:81.5,0,15.5:0:28:-83.87:83.87\n11\t103330539\t385665:2\tA\t]7:32186402]A\t53\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;MAPQ=60;MATEID=385665:1;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_7_32168501_32193501_8C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:18:23:3.5:53,0,3.5:9:11:-55.29:55.29\n11\t104139755\t605101:1\tC\tC[11:104140090[\t99\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AATAAATAAC;MAPQ=60;MATEID=605101:2;MATENM=0;NM=5;NUMPARTS=2;SCTG=c_11_104125001_104150001_1C;SPAN=335;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:48:21:13.2:145.2,13.2,0:37:18:-145.2:145.2\n11\t104140090\t605101:2\tA\t]11:104139755]A\t99\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AATAAATAAC;MAPQ=60;MATEID=605101:1;MATENM=5;NM=0;NUMPARTS=2;SCTG=c_11_104125001_104150001_1C;SPAN=335;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:48:21:13.2:145.2,13.2,0:37:18:-145.2:145.2\n11\t104397023\t605173:1\tA\tA[11:104402502[\t69\tPASS\tEVDNC=ASSMB;HOMSEQ=ATA;MAPQ=60;MATEID=605173:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_104394501_104419501_2C;SPAN=5479;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:23:13:6.3:69.3,6.3,0:23:0:-69.32:69.32\n11\t104402502\t605173:2\tA\t]11:104397023]A\t69\tPASS\tEVDNC=ASSMB;HOMSEQ=ATA;MAPQ=60;MATEID=605173:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_104394501_104419501_2C;SPAN=5479;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:23:13:6.3:69.3,6.3,0:23:0:-69.32:69.32\n11\t104457529\t605189:1\tG\tG[11:104458049[\t27\tPASS\tEVDNC=ASSMB;INSERTION=AAATGG;MAPQ=60;MATEID=605189:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_11_104443501_104468501_0C;SPAN=520;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:19:17.9:27.8,0,17.9:10:0:-27.73:27.73\n11\t104458049\t605189:2\tC\t]11:104457529]C\t27\tPASS\tEVDNC=ASSMB;INSERTION=AAATGG;MAPQ=60;MATEID=605189:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_11_104443501_104468501_0C;SPAN=520;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:19:17.9:27.8,0,17.9:10:0:-27.73:27.73\n11\t106272375\t605556:1\tC\t[11:106273063[C\t66\tPASS\tDISC_MAPQ=0;EVDNC=TSI_L;HOMSEQ=AATAATAGTCTAATTTTCTCTTGGTAGTCCAGATCACTATCCCCAACCAACACTGTAACTCCCTTCTTAGACTGTTGAATCAGAGGCTTGAGGGACATAAAGTGTAAACATGTATAATATTATATATAATATATAATATAATTGT;INSERTION=AGGGACATAAAGTGTAAACATGTATAATATTATA;MAPQ=60;MATEID=605556:2;MATENM=2;NM=2;NUMPARTS=3;REPSEQ=GGG;SCTG=c_11_106256501_106281501_13C;SPAN=688;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:21:24:3.3:66,3.3,0:20:5:-67.03:67.03\n11\t106273063\t605556:2\tT\t[11:106272375[T\t66\tPASS\tDISC_MAPQ=60;EVDNC=TSI_L;HOMSEQ=AATAATAGTCTAATTTTCTCTTGGTAGTCCAGATCACTATCCCCAACCAACACTGTAACTCCCTTCTTAGACTGTTGAATCAGAGGCTTGAGGGACATAAAGTGTAAACATGTATAATATTATATATAATATATAATATAATTGT;INSERTION=AGGGACATAAAGTGTAAACATGTATAATATTATA;MAPQ=60;MATEID=605556:1;MATENM=2;NM=2;NUMPARTS=3;REPSEQ=GGG;SCTG=c_11_106256501_106281501_13C;SPAN=688;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:21:24:3.3:66,3.3,0:20:5:-67.03:67.03\n11\t107280913\t605801:1\tA\t[11:107298910[A\t23\tPASS\tDISC_MAPQ=30;EVDNC=DSCRD;IMPRECISE;MAPQ=30;MATEID=605801:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=11:107280913(-)-11:107298910(-)__11_107285501_107310501D;SPAN=17997;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:8:1:2.1:23.1,2.1,0:0:8:-23.11:23.11\n11\t107298910\t605801:2\tT\t[11:107280913[T\t23\tPASS\tDISC_MAPQ=46;EVDNC=DSCRD;IMPRECISE;MAPQ=46;MATEID=605801:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=11:107280913(-)-11:107298910(-)__11_107285501_107310501D;SPAN=17997;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:8:1:2.1:23.1,2.1,0:0:8:-23.11:23.11\n11\t117134598\t608060:1\tA\tA]11:117210072]\t56\tPASS\tDISC_MAPQ=58;EVDNC=DSCRD;IMPRECISE;MAPQ=58;MATEID=608060:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=11:117134598(+)-11:117210072(+)__11_117208001_117233001D;SPAN=75474;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:19:14:5.1:56.1,5.1,0:0:19:-56.11:56.11\n11\t117210072\t608060:2\tT\tT]11:117134598]\t56\tPASS\tDISC_MAPQ=56;EVDNC=DSCRD;IMPRECISE;MAPQ=56;MATEID=608060:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=11:117134598(+)-11:117210072(+)__11_117208001_117233001D;SPAN=75474;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:19:14:5.1:56.1,5.1,0:0:19:-56.11:56.11\n11\t117255064\t608067:2\tC\t[11:56497246[C\t41\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=C;MAPQ=60;MATEID=608067:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_117232501_117257501_23C;SPAN=60757818;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:18:1.7:41.3,0,1.7:8:11:-42.92:42.92\n11\t117515381\t608868:1\tT\t]11:119023562]T\t29\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;INSERTION=GAGACTAGCC;MAPQ=60;MATEID=608868:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_119021001_119046001_15C;SPAN=1508181;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:25:29.3:29.3,0,32.6:6:8:-29.28:29.3\n11\t118947887\t608808:1\tA\t]11:118948030]A\t33\tPASS\tEVDNC=ASSMB;HOMSEQ=AT;MAPQ=60;MATEID=608808:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_118947501_118972501_56C;SPAN=143;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:16:70:33.2:33.2,0,142.1:16:0:-33.14:37.03\n11\t118948030\t608808:2\tT\tT[11:118947887[\t33\tPASS\tEVDNC=ASSMB;HOMSEQ=AT;MAPQ=60;MATEID=608808:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_118947501_118972501_56C;SPAN=143;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:16:70:33.2:33.2,0,142.1:16:0:-33.14:37.03\n11\t119023562\t608868:2\tT\tT[11:117515381[\t29\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;INSERTION=GAGACTAGCC;MAPQ=60;MATEID=608868:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_119021001_119046001_15C;SPAN=1508181;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:25:29.3:29.3,0,32.6:6:8:-29.28:29.3\n11\t119253540\t608936:2\tC\t[11:73967021[C\t99\tPASS\tDISC_MAPQ=60;EVDNC=TSI_L;INSERTION=CATGCACCACCACACCCAGCTAA;MAPQ=60;MATEID=608936:1;MATENM=2;NM=0;NUMPARTS=3;REPSEQ=TTT;SCTG=c_11_119241501_119266501_36C;SPAN=45286519;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:41:15:11.4:125.4,11.4,0:37:7:-125.4:125.4\n11\t119486278\t609005:1\tA\tA[11:119486553[\t99\tPASS\tEVDNC=ASSMB;INSERTION=CCTCTGCCCCTCACCTCTGTCTCTGGGTCTTTGCCACCTGCCTCCTCCTTTCCTCCCTCCTGGACCTGCTTTCCCTCTCACTTGCTGAAGATGAGGCCCCACCACTCTTGCTTTGATGAAATCATCCATTTATGTGTTTAATCTTATAGTATTATATGCATTCTTTTACATGATTTCAAAATCTTTTGGCAGCAAAATATGCATAAATGACTGCTTATAGATGAATGCACGTGCACGTGTGTGTTTGGGGAGGGGGT;MAPQ=60;MATEID=609005:2;MATENM=6;NM=1;NUMPARTS=2;SCTG=c_11_119486501_119511501_30C;SPAN=275;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:61:14:16.8:184.8,16.8,0:61:0:-184.8:184.8\n11\t119486553\t609005:2\tG\t]11:119486278]G\t99\tPASS\tEVDNC=ASSMB;INSERTION=CCTCTGCCCCTCACCTCTGTCTCTGGGTCTTTGCCACCTGCCTCCTCCTTTCCTCCCTCCTGGACCTGCTTTCCCTCTCACTTGCTGAAGATGAGGCCCCACCACTCTTGCTTTGATGAAATCATCCATTTATGTGTTTAATCTTATAGTATTATATGCATTCTTTTACATGATTTCAAAATCTTTTGGCAGCAAAATATGCATAAATGACTGCTTATAGATGAATGCACGTGCACGTGTGTGTTTGGGGAGGGGGT;MAPQ=60;MATEID=609005:1;MATENM=1;NM=6;NUMPARTS=2;SCTG=c_11_119486501_119511501_30C;SPAN=275;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:61:14:16.8:184.8,16.8,0:61:0:-184.8:184.8\n11\t128967524\t611508:1\tG\t]11:129745642]G\t72\tPASS\tEVDNC=ASSMB;HOMSEQ=GA;MAPQ=60;MATEID=611508:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_129727501_129752501_2C;SPAN=778118;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:24:24:6.6:72.6,6.6,0:24:0:-72.62:72.62\n11\t129051675\t611288:2\tG\t[3:128657391[G\t17\tPASS\tDISC_MAPQ=17;EVDNC=ASDIS;HOMSEQ=GGCTGGG;MAPQ=60;MATEID=611288:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_11_129041501_129066501_11C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:7:19:17.9:17.9,0,27.8:4:3:-17.77:17.94\n11\t129745642\t611508:2\tA\tA[11:128967524[\t72\tPASS\tEVDNC=ASSMB;HOMSEQ=GA;MAPQ=60;MATEID=611508:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_129727501_129752501_2C;SPAN=778118;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:24:24:6.6:72.6,6.6,0:24:0:-72.62:72.62\n11\t134934947\t612620:1\tT\tT[11:134936118[\t52\tPASS\tDISC_MAPQ=38;EVDNC=DSCRD;IMPRECISE;MAPQ=38;MATEID=612620:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=11:134934947(+)-11:134936118(-)__11_134921501_134946501D;SPAN=1171;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:18:11:4.8:52.8,4.8,0:0:18:-52.81:52.81\n11\t134936118\t612620:2\tC\t]11:134934947]C\t52\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=612620:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=11:134934947(+)-11:134936118(-)__11_134921501_134946501D;SPAN=1171;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:18:11:4.8:52.8,4.8,0:0:18:-52.81:52.81\n12\t520552\t612793:1\tT\t]12:520645]T\t50\tPASS\tEVDNC=ASSMB;HOMSEQ=TG;MAPQ=60;MATEID=612793:2;MATENM=2;NM=1;NUMPARTS=2;SCTG=c_12_514501_539501_7C;SPAN=93;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:18:33:30.5:50.3,0,30.5:18:0:-50.33:50.33\n12\t520645\t612793:2\tG\tG[12:520552[\t50\tPASS\tEVDNC=ASSMB;HOMSEQ=TG;MAPQ=60;MATEID=612793:1;MATENM=1;NM=2;NUMPARTS=2;SCTG=c_12_514501_539501_7C;SPAN=93;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:18:33:30.5:50.3,0,30.5:18:0:-50.33:50.33\n12\t6429248\t614235:1\tG\tG[12:6429610[\t42\tPASS\tDISC_MAPQ=58;EVDNC=ASDIS;HOMSEQ=GCCCGCCTCGGCCTCCCAAAGTGCTGG;MAPQ=60;MATEID=614235:2;MATENM=0;NM=4;NUMPARTS=2;SCTG=c_12_6419001_6444001_4C;SPAN=362;SUBN=4;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:14:5:3.9:42.9,3.9,0:10:5:-42.91:42.91\n12\t6429610\t614235:2\tG\t]12:6429248]G\t42\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=GCCCGCCTCGGCCTCCCAAAGTGCTGG;MAPQ=60;MATEID=614235:1;MATENM=4;NM=0;NUMPARTS=2;SCTG=c_12_6419001_6444001_4C;SPAN=362;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:14:5:3.9:42.9,3.9,0:10:5:-42.91:42.91\n12\t7083306\t614416:1\tT\t]12:7083723]T\t46\tPASS\tDISC_MAPQ=37;EVDNC=DSCRD;IMPRECISE;MAPQ=37;MATEID=614416:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=12:7083306(-)-12:7083723(+)__12_7080501_7105501D;SPAN=417;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:15:15:4.2:46.2,4.2,0:0:15:-46.21:46.21\n12\t7083723\t614416:2\tN\tN[12:7083306[\t46\tPASS\tDISC_MAPQ=53;EVDNC=DSCRD;IMPRECISE;MAPQ=53;MATEID=614416:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=12:7083306(-)-12:7083723(+)__12_7080501_7105501D;SPAN=417;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:15:15:4.2:46.2,4.2,0:0:15:-46.21:46.21\n12\t7677446\t614599:1\tT\t[18:46441888[T\t33\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;INSERTION=GGCCC;MAPQ=60;MATEID=614599:2;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_12_7668501_7693501_2C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:11:8:3:33,3,0:9:6:-33.01:33.01\n12\t8307812\t189995:2\tT\t]3:130167162]T\t23\tPASS\tDISC_MAPQ=23;EVDNC=DSCRD;IMPRECISE;MAPQ=23;MATEID=189995:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=3:130167162(+)-12:8307812(-)__3_130144001_130169001D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:8:5:2.1:23.1,2.1,0:0:8:-23.11:23.11\n12\t8308047\t614848:2\tT\tT[3:130167390[\t22\tPASS\tDISC_MAPQ=35;EVDNC=DSCRD;IMPRECISE;MAPQ=35;MATEID=614848:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=3:130167390(-)-12:8308047(+)__12_8305501_8330501D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:14:12.5:22.4,0,12.5:0:8:-22.62:22.62\n12\t8864256\t615005:1\tT\tT[12:8865272[\t62\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=GCTCATGCCTGT;MAPQ=60;MATEID=615005:2;MATENM=6;NM=25;NUMPARTS=2;SCTG=c_12_8844501_8869501_10C;SPAN=1016;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:21:5:5.7:62.7,5.7,0:15:9:-62.72:62.72\n12\t8865272\t615005:2\tG\t]12:8864256]G\t62\tPASS\tDISC_MAPQ=49;EVDNC=ASDIS;HOMSEQ=GCTCATGCCTGT;MAPQ=60;MATEID=615005:1;MATENM=25;NM=6;NUMPARTS=2;SCTG=c_12_8844501_8869501_10C;SPAN=1016;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:21:5:5.7:62.7,5.7,0:15:9:-62.72:62.72\n12\t9319621\t615195:1\tG\tG]12:9412218]\t29\tPASS\tDISC_MAPQ=58;EVDNC=DSCRD;IMPRECISE;MAPQ=58;MATEID=615195:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=12:9319621(+)-12:9412218(+)__12_9408001_9433001D;SPAN=92597;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:9:10:2.7:29.7,2.7,0:0:9:-29.08:29.08\n12\t9405219\t615188:1\tT\tT[12:9406080[\t56\tPASS\tDISC_MAPQ=56;EVDNC=DSCRD;IMPRECISE;MAPQ=56;MATEID=615188:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=12:9405219(+)-12:9406080(-)__12_9383501_9408501D;SPAN=861;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:19:8:5.1:56.1,5.1,0:0:19:-56.11:56.11\n12\t9406080\t615188:2\tC\t]12:9405219]C\t56\tPASS\tDISC_MAPQ=52;EVDNC=DSCRD;IMPRECISE;MAPQ=52;MATEID=615188:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=12:9405219(+)-12:9406080(-)__12_9383501_9408501D;SPAN=861;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:19:8:5.1:56.1,5.1,0:0:19:-56.11:56.11\n12\t9412218\t615195:2\tT\tT]12:9319621]\t29\tPASS\tDISC_MAPQ=56;EVDNC=DSCRD;IMPRECISE;MAPQ=56;MATEID=615195:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=12:9319621(+)-12:9412218(+)__12_9408001_9433001D;SPAN=92597;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:9:10:2.7:29.7,2.7,0:0:9:-29.08:29.08\n12\t9480168\t620653:1\tG\tG]12:31201038]\t26\tPASS\tDISC_MAPQ=22;EVDNC=DSCRD;IMPRECISE;MAPQ=22;MATEID=620653:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=12:9480168(+)-12:31201038(+)__12_31188501_31213501D;SPAN=21720870;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:13:6.2:26,0,6.2:0:9:-26.69:26.69\n12\t12653308\t616055:1\tG\t[Un_KN707783v1_decoy:1[G\t42\tPASS\tEVDNC=ASSMB;HOMSEQ=GGCATGGTGGCTCACGCCTGTA;MAPQ=60;MATEID=616055:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_12_12642001_12667001_21C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:14:8:3.9:42.9,3.9,0:14:0:-42.91:42.91\n12\t14323917\t616477:1\tT\t]X:38199383]T\t36\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TTCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGAGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCACGCCACTGCACTCCAGCCTGGG;MAPQ=60;MATEID=616477:2;MATENM=6;NM=4;NUMPARTS=2;SCTG=c_12_14308001_14333001_21C;SPAN=-1;SUBN=1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:12:7:3.3:36.3,3.3,0:6:7:-36.31:36.31\n12\t17463563\t617131:1\tA\tA[12:17464684[\t52\tPASS\tDISC_MAPQ=58;EVDNC=DSCRD;IMPRECISE;MAPQ=58;MATEID=617131:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=12:17463563(+)-12:17464684(-)__12_17444001_17469001D;SPAN=1121;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:18:3:4.8:52.8,4.8,0:0:18:-52.81:52.81\n12\t17464684\t617131:2\tC\t]12:17463563]C\t52\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=617131:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=12:17463563(+)-12:17464684(-)__12_17444001_17469001D;SPAN=1121;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:18:3:4.8:52.8,4.8,0:0:18:-52.81:52.81\n12\t25803192\t619289:1\tG\t[12:125316601[G\t52\tPASS\tDISC_MAPQ=44;EVDNC=DSCRD;IMPRECISE;MAPQ=44;MATEID=619289:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=12:25803192(-)-12:125316601(-)__12_25798501_25823501D;SPAN=99513409;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:18:10:4.8:52.8,4.8,0:0:18:-52.81:52.81\n12\t28908761\t620046:1\tA\t]12:28908886]A\t72\tPASS\tEVDNC=ASSMB;INSERTION=A;MAPQ=60;MATEID=620046:2;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_12_28885501_28910501_8C;SPAN=125;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:25:37:19.4:72.2,0,19.4:25:0:-73.68:73.68\n12\t28908886\t620046:2\tT\tT[12:28908761[\t72\tPASS\tEVDNC=ASSMB;INSERTION=A;MAPQ=60;MATEID=620046:1;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_12_28885501_28910501_8C;SPAN=125;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:25:37:19.4:72.2,0,19.4:25:0:-73.68:73.68\n12\t30591611\t620496:1\tT\tT[12:30593306[\t23\tPASS\tEVDNC=ASSMB;INSERTION=CC;MAPQ=60;MATEID=620496:2;MATENM=2;NM=3;NUMPARTS=2;SCTG=c_12_30576001_30601001_5C;SPAN=1695;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:8:3:2.1:23.1,2.1,0:8:0:-23.11:23.11\n12\t30593306\t620496:2\tA\t]12:30591611]A\t23\tPASS\tEVDNC=ASSMB;INSERTION=CC;MAPQ=60;MATEID=620496:1;MATENM=3;NM=2;NUMPARTS=2;SCTG=c_12_30576001_30601001_5C;SPAN=1695;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:8:3:2.1:23.1,2.1,0:8:0:-23.11:23.11\n12\t31201038\t620653:2\tA\tA]12:9480168]\t26\tPASS\tDISC_MAPQ=58;EVDNC=DSCRD;IMPRECISE;MAPQ=58;MATEID=620653:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=12:9480168(+)-12:31201038(+)__12_31188501_31213501D;SPAN=21720870;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:13:6.2:26,0,6.2:0:9:-26.69:26.69\n12\t32891138\t621190:1\tA\t[12:32906808[A\t49\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;INSERTION=A;MAPQ=60;MATEID=621190:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_32903501_32928501_118C;SPAN=15670;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:17:24:9.8:49.4,0,9.8:13:6:-50.74:50.74\n12\t32906808\t621190:2\tA\t[12:32891138[A\t49\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;INSERTION=A;MAPQ=60;MATEID=621190:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_32903501_32928501_118C;SPAN=15670;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:17:24:9.8:49.4,0,9.8:13:6:-50.74:50.74\n12\t33009535\t621284:1\tC\t[12:33119661[C\t72\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=CT;MAPQ=60;MATEID=621284:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_33099501_33124501_61C;SPAN=110126;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:24:28:1.2:72.6,1.2,0:16:12:-76:76\n12\t33118851\t626174:1\tA\tA]12:45341570]\t36\tPASS\tDISC_MAPQ=59;EVDNC=DSCRD;IMPRECISE;MAPQ=59;MATEID=626174:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=12:33118851(+)-12:45341570(+)__12_45325001_45350001D;SPAN=12222719;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:12:11:3.3:36.3,3.3,0:0:12:-36.31:36.31\n12\t33119661\t621284:2\tA\t[12:33009535[A\t72\tPASS\tDISC_MAPQ=58;EVDNC=ASDIS;HOMSEQ=CT;MAPQ=60;MATEID=621284:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_33099501_33124501_61C;SPAN=110126;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:24:28:1.2:72.6,1.2,0:16:12:-76:76\n12\t33574300\t621458:1\tC\tC[12:33574572[\t10\tPASS\tEVDNC=ASSMB;HOMSEQ=GGGTGGC;MAPQ=60;MATEID=621458:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_33565001_33590001_95C;SPAN=272;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:7:47:10.1:10.1,0,105.8:7:0:-9.896:14.75\n12\t33574572\t621458:2\tG\t]12:33574300]G\t10\tPASS\tEVDNC=ASSMB;HOMSEQ=GGGTGGC;MAPQ=60;MATEID=621458:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_33565001_33590001_95C;SPAN=272;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:7:47:10.1:10.1,0,105.8:7:0:-9.896:14.75\n12\t33700205\t621491:1\tA\tA[12:33700420[\t64\tPASS\tEVDNC=ASSMB;HOMSEQ=A;MAPQ=60;MATEID=621491:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_12_33687501_33712501_40C;SPAN=215;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:22:29:8.3:64.4,0,8.3:22:0:-66.94:66.94\n12\t33700420\t621491:2\tA\t]12:33700205]A\t64\tPASS\tEVDNC=ASSMB;HOMSEQ=A;MAPQ=60;MATEID=621491:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_12_33687501_33712501_40C;SPAN=215;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:22:29:8.3:64.4,0,8.3:22:0:-66.94:66.94\n12\t33864471\t669322:1\tG\tG]13:48282773]\t23\tPASS\tDISC_MAPQ=59;EVDNC=DSCRD;IMPRECISE;MAPQ=59;MATEID=669322:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=12:33864471(+)-13:48282773(+)__13_48265001_48290001D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:11:3.5:23.3,0,3.5:0:8:-24.05:24.05\n12\t33946461\t621610:1\tA\tA[12:33952570[\t29\tPASS\tDISC_MAPQ=59;EVDNC=ASDIS;INSERTION=G;MAPQ=60;MATEID=621610:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_12_33932501_33957501_126C;SPAN=6109;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:36:29.6:29.6,0,59.3:6:9:-29.49:30.1\n12\t33946492\t630191:1\tG\t[12:59699013[G\t66\tPASS\tDISC_MAPQ=57;EVDNC=ASDIS;HOMSEQ=G;MAPQ=60;MATEID=630191:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_59682001_59707001_18C;SPAN=25752521;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:22:16:6:66,6,0:19:8:-66.02:66.02\n12\t33947951\t627288:1\tA\tA[12:49261288[\t33\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=627288:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_49245001_49270001_33C;SPAN=15313337;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:11:13:0.3:33,0.3,0:11:0:-34.67:34.67\n12\t33952570\t621610:2\tA\t]12:33946461]A\t29\tPASS\tDISC_MAPQ=59;EVDNC=ASDIS;INSERTION=G;MAPQ=60;MATEID=621610:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_12_33932501_33957501_126C;SPAN=6109;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:36:29.6:29.6,0,59.3:6:9:-29.49:30.1\n12\t34680752\t621866:1\tT\t]12:34681291]T\t8\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TATGGTAGAAAAGGAAATATCTTCATA;MAPQ=0;MATEID=621866:2;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_12_34667501_34692501_97C;SPAN=539;SUBN=5;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:75:8.6:8.6,0,180.2:3:6:-8.627:18.06\n12\t34681291\t621866:2\tA\tA[12:34680752[\t8\tPASS\tDISC_MAPQ=54;EVDNC=ASDIS;HOMSEQ=TATGGTAGAAAAGGAAATATCTTCATA;MAPQ=48;MATEID=621866:1;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_12_34667501_34692501_97C;SPAN=539;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:75:8.6:8.6,0,180.2:3:6:-8.627:18.06\n12\t34692129\t621876:1\tT\tT[12:34696203[\t36\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=CTTTGTGATGTGTGCATTCAACTCACAGAGTTTAACCTT;MAPQ=60;MATEID=621876:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_12_34667501_34692501_252C;SPAN=4074;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:12:12:3.3:36.3,3.3,0:8:7:-36.31:36.31\n12\t34696203\t621876:2\tC\t]12:34692129]C\t36\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=CTTTGTGATGTGTGCATTCAACTCACAGAGTTTAACCTT;MAPQ=60;MATEID=621876:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_12_34667501_34692501_252C;SPAN=4074;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:12:12:3.3:36.3,3.3,0:8:7:-36.31:36.31\n12\t34775495\t621965:1\tT\t]12:34802522]T\t99\tPASS\tDISC_MAPQ=23;EVDNC=ASDIS;HOMSEQ=TATCTTCGTATAAAAACTAGACAGAATCATTCT;MAPQ=51;MATEID=621965:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_12_34790001_34815001_170C;SPAN=27027;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:39:7:10.8:118.8,10.8,0:36:3:-118.8:118.8\n12\t34797611\t621973:1\tT\tT[12:34804209[\t31\tPASS\tDISC_MAPQ=39;EVDNC=DSCRD;IMPRECISE;MAPQ=39;MATEID=621973:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=12:34797611(+)-12:34804209(-)__12_34790001_34815001D;SPAN=6598;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:28:31.7:31.7,0,38.3:0:12:-31.74:31.78\n12\t34802522\t621965:2\tT\tT[12:34775495[\t99\tPASS\tDISC_MAPQ=19;EVDNC=ASDIS;HOMSEQ=TATCTTCGTATAAAAACTAGACAGAATCATTCT;MAPQ=60;MATEID=621965:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_12_34790001_34815001_170C;SPAN=27027;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:39:7:10.8:118.8,10.8,0:36:3:-118.8:118.8\n12\t34804209\t621973:2\tC\t]12:34797611]C\t31\tPASS\tDISC_MAPQ=44;EVDNC=DSCRD;IMPRECISE;MAPQ=44;MATEID=621973:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=12:34797611(+)-12:34804209(-)__12_34790001_34815001D;SPAN=6598;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:28:31.7:31.7,0,38.3:0:12:-31.74:31.78\n12\t35065508\t622080:1\tG\tG[12:36036026[\t69\tPASS\tDISC_MAPQ=44;EVDNC=DSCRD;IMPRECISE;MAPQ=44;MATEID=622080:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=12:35065508(+)-12:36036026(-)__12_35059501_35084501D;SPAN=970518;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:23:5:6.3:69.3,6.3,0:0:23:-69.32:69.32\n12\t35279799\t622381:1\tG\tG[12:36171543[\t23\tPASS\tDISC_MAPQ=25;EVDNC=DSCRD;IMPRECISE;MAPQ=25;MATEID=622381:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=12:35279799(+)-12:36171543(-)__12_36162001_36187001D;SPAN=891744;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:11:3.5:23.3,0,3.5:0:8:-24.05:24.05\n12\t35320953\t622592:1\tG\tG[12:36636654[\t46\tPASS\tDISC_MAPQ=33;EVDNC=DSCRD;IMPRECISE;MAPQ=33;MATEID=622592:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=12:35320953(+)-12:36636654(-)__12_36627501_36652501D;SPAN=1315701;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:16:5:4.2:46.2,4.2,0:0:16:-46.21:46.21\n12\t35482224\t622730:1\tA\tA[12:37010815[\t36\tPASS\tDISC_MAPQ=17;EVDNC=DSCRD;IMPRECISE;MAPQ=17;MATEID=622730:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=12:35482224(+)-12:37010815(-)__12_36995001_37020001D;SPAN=1528591;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:12:14:0.6:36.3,0.6,0:0:12:-38:38\n12\t35633983\t622566:1\tT\tT[12:36580436[\t22\tPASS\tDISC_MAPQ=19;EVDNC=DSCRD;IMPRECISE;MAPQ=19;MATEID=622566:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=12:35633983(+)-12:36580436(-)__12_36578501_36603501D;SPAN=946453;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:16:15.5:22.1,0,15.5:0:8:-21.93:21.93\n12\t36036026\t622080:2\tC\t]12:35065508]C\t69\tPASS\tDISC_MAPQ=50;EVDNC=DSCRD;IMPRECISE;MAPQ=50;MATEID=622080:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=12:35065508(+)-12:36036026(-)__12_35059501_35084501D;SPAN=970518;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:23:5:6.3:69.3,6.3,0:0:23:-69.32:69.32\n12\t36146423\t622547:1\tA\t]12:36542570]A\t34\tPASS\tDISC_MAPQ=20;EVDNC=DSCRD;IMPRECISE;MAPQ=20;MATEID=622547:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=12:36146423(-)-12:36542570(+)__12_36529501_36554501D;SPAN=396147;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:31:34.4:34.4,0,41:0:13:-34.2:34.27\n12\t36170378\t622749:1\tT\t]12:37023657]T\t39\tPASS\tDISC_MAPQ=15;EVDNC=DSCRD;IMPRECISE;MAPQ=15;MATEID=622749:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=12:36170378(-)-12:37023657(+)__12_37019501_37044501D;SPAN=853279;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:13:3:3.6:39.6,3.6,0:0:13:-39.61:39.61\n12\t36171543\t622381:2\tA\t]12:35279799]A\t23\tPASS\tDISC_MAPQ=18;EVDNC=DSCRD;IMPRECISE;MAPQ=18;MATEID=622381:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=12:35279799(+)-12:36171543(-)__12_36162001_36187001D;SPAN=891744;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:11:3.5:23.3,0,3.5:0:8:-24.05:24.05\n12\t36386608\t622795:1\tA\t]12:37141680]A\t42\tPASS\tDISC_MAPQ=22;EVDNC=DSCRD;IMPRECISE;MAPQ=22;MATEID=622795:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=12:36386608(-)-12:37141680(+)__12_37117501_37142501D;SPAN=755072;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:14:5:3.9:42.9,3.9,0:0:14:-42.91:42.91\n12\t36542570\t622547:2\tA\tA[12:36146423[\t34\tPASS\tDISC_MAPQ=16;EVDNC=DSCRD;IMPRECISE;MAPQ=16;MATEID=622547:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=12:36146423(-)-12:36542570(+)__12_36529501_36554501D;SPAN=396147;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:31:34.4:34.4,0,41:0:13:-34.2:34.27\n12\t36580436\t622566:2\tA\t]12:35633983]A\t22\tPASS\tDISC_MAPQ=26;EVDNC=DSCRD;IMPRECISE;MAPQ=26;MATEID=622566:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=12:35633983(+)-12:36580436(-)__12_36578501_36603501D;SPAN=946453;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:16:15.5:22.1,0,15.5:0:8:-21.93:21.93\n12\t36636654\t622592:2\tC\t]12:35320953]C\t46\tPASS\tDISC_MAPQ=16;EVDNC=DSCRD;IMPRECISE;MAPQ=16;MATEID=622592:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=12:35320953(+)-12:36636654(-)__12_36627501_36652501D;SPAN=1315701;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:16:5:4.2:46.2,4.2,0:0:16:-46.21:46.21\n12\t37010815\t622730:2\tT\t]12:35482224]T\t36\tPASS\tDISC_MAPQ=30;EVDNC=DSCRD;IMPRECISE;MAPQ=30;MATEID=622730:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=12:35482224(+)-12:37010815(-)__12_36995001_37020001D;SPAN=1528591;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:12:14:0.6:36.3,0.6,0:0:12:-38:38\n12\t37023657\t622749:2\tA\tA[12:36170378[\t39\tPASS\tDISC_MAPQ=16;EVDNC=DSCRD;IMPRECISE;MAPQ=16;MATEID=622749:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=12:36170378(-)-12:37023657(+)__12_37019501_37044501D;SPAN=853279;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:13:3:3.6:39.6,3.6,0:0:13:-39.61:39.61\n12\t37141680\t622795:2\tA\tA[12:36386608[\t42\tPASS\tDISC_MAPQ=22;EVDNC=DSCRD;IMPRECISE;MAPQ=22;MATEID=622795:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=12:36386608(-)-12:37141680(+)__12_37117501_37142501D;SPAN=755072;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:14:5:3.9:42.9,3.9,0:0:14:-42.91:42.91\n12\t37253832\t622864:1\tC\t]12:37255340]C\t37\tPASS\tDISC_MAPQ=44;EVDNC=DSCRD;IMPRECISE;MAPQ=44;MATEID=622864:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=12:37253832(-)-12:37255340(+)__12_37240001_37265001D;SPAN=1508;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:19:8:37.7,0,8:0:13:-38.44:38.44\n12\t37255340\t622864:2\tN\tN[12:37253832[\t37\tPASS\tDISC_MAPQ=33;EVDNC=DSCRD;IMPRECISE;MAPQ=33;MATEID=622864:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=12:37253832(-)-12:37255340(+)__12_37240001_37265001D;SPAN=1508;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:19:8:37.7,0,8:0:13:-38.44:38.44\n12\t37258962\t622868:1\tA\t]12:37261422]A\t13\tPASS\tDISC_MAPQ=36;EVDNC=DSCRD;IMPRECISE;MAPQ=36;MATEID=622868:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=12:37258962(-)-12:37261422(+)__12_37240001_37265001D;SPAN=2460;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:47:13.4:13.4,0,102.5:0:8:-13.2:17.36\n12\t37261422\t622868:2\tG\tG[12:37258962[\t13\tPASS\tDISC_MAPQ=50;EVDNC=DSCRD;IMPRECISE;MAPQ=50;MATEID=622868:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=12:37258962(-)-12:37261422(+)__12_37240001_37265001D;SPAN=2460;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:47:13.4:13.4,0,102.5:0:8:-13.2:17.36\n12\t37333223\t623069:1\tN\tN[12:37334767[\t99\tPASS\tDISC_MAPQ=60;EVDNC=TSI_G;HOMSEQ=CTTTTGATAGAGCAGTTTTGAAACACTGCTTTTGTAGAATCTGCTTGTGGATATACGGAACTGTTTGAGGAATTCGTTGTAAACGCAATATCTTCACATGCAAACTAGACGGAAGCATTCTCAGAAACTTCTTTGTGATGTGTACATTGAACGCACAGACTTGAACATTCCTTTTGAG;INSERTION=AGAGCAGTTTCGAAACAGTGTTTTTATAGTATCTGCAAGAGGATATGTGGAACGTTTTGAGGCCTATGATGGAAAAGGAAATATCTTCACATAAATACTAGATAGAAGCATTCTCACCAACTGCTTTGTGGTGTACGCATTCATCTGACAGAGTGGAACCCTTCTTTTGATAGAGCAGTTTTGAAACACACTTTTTGTAGAATCTGCAAGTGTTCAGTTAGAGCACTTTGAGGCCTATGTTGGAAAAAGAAAT;MAPQ=60;MATEID=623069:2;MATENM=1;NM=1;NUMPARTS=3;SCTG=c_12_37313501_37338501_237C;SECONDARY;SPAN=1544;SUBN=8;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:48:11:13.2:145.2,13.2,0:46:5:-145.2:145.2\n12\t37334767\t623069:2\tN\t]12:37333223]N\t99\tPASS\tDISC_MAPQ=52;EVDNC=TSI_G;HOMSEQ=CTTTTGATAGAGCAGTTTTGAAACACTGCTTTTGTAGAATCTGCTTGTGGATATACGGAACTGTTTGAGGAATTCGTTGTAAACGCAATATCTTCACATGCAAACTAGACGGAAGCATTCTCAGAAACTTCTTTGTGATGTGTACATTGAACGCACAGACTTGAACATTCCTTTTGAG;INSERTION=AGAGCAGTTTCGAAACAGTGTTTTTATAGTATCTGCAAGAGGATATGTGGAACGTTTTGAGGCCTATGATGGAAAAGGAAATATCTTCACATAAATACTAGATAGAAGCATTCTCACCAACTGCTTTGTGGTGTACGCATTCATCTGACAGAGTGGAACCCTTCTTTTGATAGAGCAGTTTTGAAACACACTTTTTGTAGAATCTGCAAGTGTTCAGTTAGAGCACTTTGAGGCCTATGTTGGAAAAAGAAAT;MAPQ=60;MATEID=623069:1;MATENM=1;NM=1;NUMPARTS=3;SCTG=c_12_37313501_37338501_237C;SECONDARY;SPAN=1544;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:48:11:13.2:145.2,13.2,0:46:5:-145.2:145.2\n12\t37365284\t623185:1\tA\tA[12:37367892[\t44\tPASS\tDISC_MAPQ=58;EVDNC=DSCRD;IMPRECISE;MAPQ=58;MATEID=623185:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=12:37365284(+)-12:37367892(-)__12_37362501_37387501D;SPAN=2608;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:15:19:1.4:44.3,0,1.4:0:15:-46.2:46.2\n12\t37367892\t623185:2\tT\t]12:37365284]T\t44\tPASS\tDISC_MAPQ=56;EVDNC=DSCRD;IMPRECISE;MAPQ=56;MATEID=623185:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=12:37365284(+)-12:37367892(-)__12_37362501_37387501D;SPAN=2608;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:15:19:1.4:44.3,0,1.4:0:15:-46.2:46.2\n12\t37597426\t623343:1\tT\tT[12:37600816[\t40\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AGAGCAGTTTTGAAACACT;MAPQ=60;MATEID=623343:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_12_37583001_37608001_116C;SPAN=3390;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:21:10.7:40.4,0,10.7:9:5:-41.11:41.11\n12\t37600816\t623343:2\tA\t]12:37597426]A\t40\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AGAGCAGTTTTGAAACACT;MAPQ=60;MATEID=623343:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_12_37583001_37608001_116C;SPAN=3390;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:21:10.7:40.4,0,10.7:9:5:-41.11:41.11\n12\t37616372\t623373:1\tT\tT[12:37624294[\t33\tPASS\tDISC_MAPQ=54;EVDNC=ASDIS;HOMSEQ=AAGTGGATATTTGGAATGCTTTGAGGCCT;MAPQ=0;MATEID=623373:2;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_12_37607501_37632501_47C;SPAN=7922;SUBN=8;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:34:33.5:33.5,0,50:6:10:-33.36:33.58\n12\t37624294\t623373:2\tA\t]12:37616372]A\t33\tPASS\tDISC_MAPQ=58;EVDNC=ASDIS;HOMSEQ=AAGTGGATATTTGGAATGCTTTGAGGCCT;MAPQ=60;MATEID=623373:1;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_12_37607501_37632501_47C;SPAN=7922;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:34:33.5:33.5,0,50:6:10:-33.36:33.58\n12\t37828951\t623821:1\tG\t]12:37833257]G\t99\tPASS\tDISC_MAPQ=59;EVDNC=DSCRD;IMPRECISE;MAPQ=59;MATEID=623821:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=12:37828951(-)-12:37833257(+)__12_37828001_37853001D;SPAN=4306;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:57:55:15.9:174.9,15.9,0:0:57:-174.9:174.9\n12\t37833257\t623821:2\tG\tG[12:37828951[\t99\tPASS\tDISC_MAPQ=59;EVDNC=DSCRD;IMPRECISE;MAPQ=59;MATEID=623821:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=12:37828951(-)-12:37833257(+)__12_37828001_37853001D;SPAN=4306;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:57:55:15.9:174.9,15.9,0:0:57:-174.9:174.9\n12\t37924184\t623856:1\tT\t[12:37924724[T\t38\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TA;MAPQ=60;MATEID=623856:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_12_37901501_37926501_41C;SPAN=540;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:15:41:38:38,0,64.4:12:10:-37.99:38.38\n12\t37924724\t623856:2\tT\t[12:37924184[T\t38\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TA;MAPQ=60;MATEID=623856:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_12_37901501_37926501_41C;SPAN=540;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:15:41:38:38,0,64.4:12:10:-37.99:38.38\n12\t39152300\t926030:1\tC\t[X:11714300[C\t14\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;INSERTION=GTTAGCAGC;MAPQ=60;MATEID=926030:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_23_11711001_11736001_27C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:6:21:14:14,0,37.1:3:6:-13.9:14.56\n12\t39714095\t624468:1\tA\t]12:39714154]A\t46\tPASS\tEVDNC=ASSMB;INSERTION=GTATGTATACGTGTATATGTATATATGTACATACGTATAT;MAPQ=60;MATEID=624468:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_39690001_39715001_31C;SPAN=59;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:17:36:42.8:46.1,0,42.8:17:0:-46:46\n12\t39714154\t624468:2\tC\tC[12:39714095[\t46\tPASS\tEVDNC=ASSMB;INSERTION=GTATGTATACGTGTATATGTATATATGTACATACGTATAT;MAPQ=60;MATEID=624468:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_39690001_39715001_31C;SPAN=59;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:17:36:42.8:46.1,0,42.8:17:0:-46:46\n12\t39761555\t624525:1\tT\t]12:39850525]T\t46\tPASS\tDISC_MAPQ=56;EVDNC=ASDIS;INSERTION=TTAATTAATTGCTATATATGACTAATTAAGATATA;MAPQ=60;MATEID=624525:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_12_39837001_39862001_14C;SPAN=88970;SUBN=3;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:16:16:4.2:46.2,4.2,0:11:7:-46.21:46.21\n12\t39850525\t624525:2\tA\tA[12:39761555[\t46\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;INSERTION=TTAATTAATTGCTATATATGACTAATTAAGATATA;MAPQ=60;MATEID=624525:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_12_39837001_39862001_14C;SPAN=88970;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:16:16:4.2:46.2,4.2,0:11:7:-46.21:46.21\n12\t39931333\t624573:1\tA\tA[12:40006564[\t52\tPASS\tEVDNC=ASSMB;INSERTION=TGCCTAATGCCTGCTACTAAATGCCTACTACTAATGCCTGCTACTAATGCCTGCTAC;MAPQ=60;MATEID=624573:2;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_12_39984001_40009001_12C;SPAN=75231;SUBN=3;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:18:15:4.8:52.8,4.8,0:18:0:-52.81:52.81\n12\t40006564\t624573:2\tT\t]12:39931333]T\t52\tPASS\tEVDNC=ASSMB;INSERTION=TGCCTAATGCCTGCTACTAAATGCCTACTACTAATGCCTGCTACTAATGCCTGCTAC;MAPQ=60;MATEID=624573:1;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_12_39984001_40009001_12C;SPAN=75231;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:18:15:4.8:52.8,4.8,0:18:0:-52.81:52.81\n12\t40480965\t624749:1\tA\tA[12:40482623[\t44\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;INSERTION=GCTGGAGTGA;MAPQ=16;MATEID=624749:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_12_40474001_40499001_228C;SPAN=1658;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:17:41:44.6:44.6,0,57.8:6:14:-44.59:44.7\n12\t40482173\t624751:1\tC\t]12:40485152]C\t34\tPASS\tEVDNC=ASSMB;HOMSEQ=CAGGAACAACTGGATT;MAPQ=60;MATEID=624751:2;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_12_40474001_40499001_66C;SPAN=2979;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:32:34.1:34.1,0,44:13:0:-33.92:34.03\n12\t40482623\t624749:2\tC\t]12:40480965]C\t44\tPASS\tDISC_MAPQ=50;EVDNC=ASDIS;INSERTION=GCTGGAGTGA;MAPQ=60;MATEID=624749:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_12_40474001_40499001_228C;SPAN=1658;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:17:41:44.6:44.6,0,57.8:6:14:-44.59:44.7\n12\t40485152\t624751:2\tT\tT[12:40482173[\t34\tPASS\tEVDNC=ASSMB;HOMSEQ=CAGGAACAACTGGATT;MAPQ=60;MATEID=624751:1;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_12_40474001_40499001_66C;SPAN=2979;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:32:34.1:34.1,0,44:13:0:-33.92:34.03\n12\t40749548\t624895:1\tG\tG[12:40749805[\t49\tPASS\tEVDNC=ASSMB;HOMSEQ=G;MAPQ=60;MATEID=624895:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_40743501_40768501_23C;SPAN=257;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:17:17:4.5:49.5,4.5,0:17:0:-49.51:49.51\n12\t40749805\t624895:2\tG\t]12:40749548]G\t49\tPASS\tEVDNC=ASSMB;HOMSEQ=G;MAPQ=60;MATEID=624895:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_40743501_40768501_23C;SPAN=257;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:17:17:4.5:49.5,4.5,0:17:0:-49.51:49.51\n12\t42898157\t400359:2\tC\t[7:65418509[C\t75\tPASS\tDISC_MAPQ=55;EVDNC=DSCRD;IMPRECISE;MAPQ=55;MATEID=400359:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:65418509(-)-12:42898157(-)__7_65415001_65440001D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:25:13:6.9:75.9,6.9,0:0:25:-75.92:75.92\n12\t42898470\t400358:2\tG\tG]7:65418384]\t52\tPASS\tDISC_MAPQ=51;EVDNC=DSCRD;IMPRECISE;MAPQ=51;MATEID=400358:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:65418384(+)-12:42898470(+)__7_65415001_65440001D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:18:6:4.8:52.8,4.8,0:0:18:-52.81:52.81\n12\t43583657\t625822:1\tA\tA[12:43585747[\t42\tPASS\tEVDNC=ASSMB;HOMSEQ=AAGACATTCCA;MAPQ=60;MATEID=625822:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_43585501_43610501_31C;SPAN=2090;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:14:12:3.9:42.9,3.9,0:14:0:-42.91:42.91\n12\t43585747\t625822:2\tA\t]12:43583657]A\t42\tPASS\tEVDNC=ASSMB;HOMSEQ=AAGACATTCCA;MAPQ=60;MATEID=625822:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_43585501_43610501_31C;SPAN=2090;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:14:12:3.9:42.9,3.9,0:14:0:-42.91:42.91\n12\t45341570\t626174:2\tT\tT]12:33118851]\t36\tPASS\tDISC_MAPQ=57;EVDNC=DSCRD;IMPRECISE;MAPQ=57;MATEID=626174:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=12:33118851(+)-12:45341570(+)__12_45325001_45350001D;SPAN=12222719;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:12:11:3.3:36.3,3.3,0:0:12:-36.31:36.31\n12\t45509370\t626202:1\tA\tA[12:45516157[\t85\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=626202:2;MATENM=6;NM=1;NUMPARTS=2;SCTG=c_12_45496501_45521501_3C;SPAN=6787;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:28:14:7.8:85.8,7.8,0:28:0:-85.82:85.82\n12\t45516157\t626202:2\tT\t]12:45509370]T\t85\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=626202:1;MATENM=1;NM=6;NUMPARTS=2;SCTG=c_12_45496501_45521501_3C;SPAN=6787;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:28:14:7.8:85.8,7.8,0:28:0:-85.82:85.82\n12\t46181222\t626399:1\tT\t]12:46213999]T\t42\tPASS\tEVDNC=ASSMB;INSERTION=CCATGATC;MAPQ=60;MATEID=626399:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_46207001_46232001_27C;SPAN=32777;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:14:17:1.2:42.9,1.2,0:14:0:-43.71:43.71\n12\t46213999\t626399:2\tA\tA[12:46181222[\t42\tPASS\tEVDNC=ASSMB;INSERTION=CCATGATC;MAPQ=60;MATEID=626399:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_46207001_46232001_27C;SPAN=32777;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:14:17:1.2:42.9,1.2,0:14:0:-43.71:43.71\n12\t48331698\t627120:1\tT\tT[12:48334598[\t19\tPASS\tEVDNC=ASSMB;HOMSEQ=GTAATTAAGTTTATT;MAPQ=60;MATEID=627120:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_48314001_48339001_68C;SPAN=2900;SUBN=1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:25:19.4:19.4,0,42.5:8:0:-19.38:19.89\n12\t48334598\t627120:2\tG\t]12:48331698]G\t19\tPASS\tEVDNC=ASSMB;HOMSEQ=GTAATTAAGTTTATT;MAPQ=60;MATEID=627120:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_48314001_48339001_68C;SPAN=2900;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:25:19.4:19.4,0,42.5:8:0:-19.38:19.89\n12\t49261288\t627288:2\tC\t]12:33947951]C\t33\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=627288:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_49245001_49270001_33C;SPAN=15313337;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:11:13:0.3:33,0.3,0:11:0:-34.67:34.67\n12\t49498997\t187839:2\tG\tG[3:122934047[\t29\tPASS\tDISC_MAPQ=19;EVDNC=DSCRD;IMPRECISE;MAPQ=19;MATEID=187839:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=3:122934047(-)-12:49498997(+)__3_122916501_122941501D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:10:8:2.7:29.7,2.7,0:0:10:-29.71:29.71\n12\t49788828\t627372:1\tC\tC]12:49789140]\t79\tPASS\tDISC_MAPQ=60;EVDNC=TSI_G;HOMSEQ=TGAACCCAGGAGG;INSERTION=CAGCTACTCAGGAGGCTGAGGCAGGAGAATGGCG;MAPQ=60;MATEID=627372:2;MATENM=1;NM=0;NUMPARTS=3;SCTG=c_12_49784001_49809001_96C;SPAN=312;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:25:26:7.2:79.2,7.2,0:19:8:-79.22:79.22\n12\t49789140\t627372:2\tA\tA]12:49788828]\t79\tPASS\tDISC_MAPQ=60;EVDNC=TSI_G;HOMSEQ=TGAACCCAGGAGG;INSERTION=CAGCTACTCAGGAGGCTGAGGCAGGAGAATGGCG;MAPQ=60;MATEID=627372:1;MATENM=0;NM=1;NUMPARTS=3;SCTG=c_12_49784001_49809001_96C;SPAN=312;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:25:26:7.2:79.2,7.2,0:19:8:-79.22:79.22\n12\t49877510\t627407:1\tA\t]12:49877621]A\t81\tPASS\tEVDNC=ASSMB;HOMSEQ=AAG;MAPQ=60;MATEID=627407:2;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_12_49857501_49882501_91C;SPAN=111;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:30:64:77.9:81.2,0,77.9:30:0:-81.04:81.04\n12\t49877621\t627407:2\tG\tG[12:49877510[\t81\tPASS\tEVDNC=ASSMB;HOMSEQ=AAG;MAPQ=60;MATEID=627407:1;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_12_49857501_49882501_91C;SPAN=111;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:30:64:77.9:81.2,0,77.9:30:0:-81.04:81.04\n12\t49898240\t627456:1\tC\t]12:49898348]C\t24\tPASS\tEVDNC=ASSMB;HOMSEQ=CCCGGCT;MAPQ=60;MATEID=627456:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_49882001_49907001_9C;SPAN=108;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:55:24.2:24.2,0,113.3:12:0:-24.15:27.49\n12\t49898348\t627456:2\tT\tT[12:49898240[\t24\tPASS\tEVDNC=ASSMB;HOMSEQ=CCCGGCT;MAPQ=60;MATEID=627456:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_49882001_49907001_9C;SPAN=108;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:55:24.2:24.2,0,113.3:12:0:-24.15:27.49\n12\t50114523\t627507:1\tA\tA[12:50115022[\t11\tPASS\tDISC_MAPQ=22;EVDNC=ASDIS;HOMSEQ=TCCCAAAGTGCTGGGA;MAPQ=60;MATEID=627507:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_50102501_50127501_20C;SPAN=499;SUBN=1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:5:18:11.6:11.6,0,31.4:2:4:-11.45:12.06\n12\t50115022\t627507:2\tT\t]12:50114523]T\t11\tPASS\tDISC_MAPQ=17;EVDNC=ASDIS;HOMSEQ=TCCCAAAGTGCTGGGA;MAPQ=60;MATEID=627507:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_50102501_50127501_20C;SPAN=499;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:5:18:11.6:11.6,0,31.4:2:4:-11.45:12.06\n12\t52355941\t628411:1\tG\t]12:52358129]G\t22\tPASS\tEVDNC=ASSMB;HOMSEQ=G;MAPQ=60;MATEID=628411:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_52332001_52357001_104C;SPAN=2188;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:15:15.5:22.1,0,15.5:8:0:-22.25:22.25\n12\t52358129\t628411:2\tG\tG[12:52355941[\t22\tPASS\tEVDNC=ASSMB;HOMSEQ=G;MAPQ=60;MATEID=628411:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_52332001_52357001_104C;SPAN=2188;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:15:15.5:22.1,0,15.5:8:0:-22.25:22.25\n12\t52358976\t449149:2\tA\t]8:35555406]A\t26\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=449149:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=8:35555406(+)-12:52358976(-)__8_35549501_35574501D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:9:8:2.4:26.4,2.4,0:0:9:-26.41:26.41\n12\t52846424\t628594:1\tC\t]12:53082540]C\t33\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;INSERTION=GGG;MAPQ=60;MATEID=628594:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_52846501_52871501_22C;SPAN=236116;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:11:9:3:33,3,0:5:7:-33.01:33.01\n12\t53082540\t628594:2\tT\tT[12:52846424[\t33\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;INSERTION=GGG;MAPQ=12;MATEID=628594:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_52846501_52871501_22C;SPAN=236116;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:11:9:3:33,3,0:5:7:-33.01:33.01\n12\t53612036\t628841:1\tC\tC[12:53612319[\t3\tPASS\tEVDNC=ASSMB;HOMSEQ=CTCTGTCACCCAGGCTGGAGTGCAGTGGC;MAPQ=60;MATEID=628841:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_53606001_53631001_7C;SPAN=283;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:4:35:3.5:3.5,0,82.7:4:0:-3.366:7.934\n12\t53612319\t628841:2\tC\t]12:53612036]C\t3\tPASS\tEVDNC=ASSMB;HOMSEQ=CTCTGTCACCCAGGCTGGAGTGCAGTGGC;MAPQ=60;MATEID=628841:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_53606001_53631001_7C;SPAN=283;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:4:35:3.5:3.5,0,82.7:4:0:-3.366:7.934\n12\t54231570\t629060:1\tA\tA]12:54239608]\t30\tPASS\tDISC_MAPQ=47;EVDNC=ASDIS;MAPQ=60;MATEID=629060:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_54218501_54243501_67C;SPAN=8038;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:34:30.2:30.2,0,53.3:7:6:-30.06:30.47\n12\t54239608\t629060:2\tT\tT]12:54231570]\t30\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;MAPQ=60;MATEID=629060:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_54218501_54243501_67C;SPAN=8038;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:34:30.2:30.2,0,53.3:7:6:-30.06:30.47\n12\t56596312\t629585:1\tG\tG[15:39702424[\t85\tPASS\tEVDNC=ASSMB;INSERTION=AGCTAGGTGGATTTTCTCTTC;MAPQ=60;MATEID=629585:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_56595001_56620001_2C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:28:14:7.8:85.8,7.8,0:28:0:-85.82:85.82\n12\t59699013\t630191:2\tC\t[12:33946492[C\t66\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=G;MAPQ=60;MATEID=630191:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_59682001_59707001_18C;SPAN=25752521;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:22:16:6:66,6,0:19:8:-66.02:66.02\n12\t60018568\t630268:1\tT\tT[12:60019728[\t36\tPASS\tEVDNC=ASSMB;HOMSEQ=GAAT;MAPQ=50;MATEID=630268:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_60000501_60025501_61C;SPAN=1160;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:24:23:36.2,0,23:13:0:-36.29:36.29\n12\t60019728\t630268:2\tG\t]12:60018568]G\t36\tPASS\tEVDNC=ASSMB;HOMSEQ=GAAT;MAPQ=60;MATEID=630268:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_60000501_60025501_61C;SPAN=1160;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:24:23:36.2,0,23:13:0:-36.29:36.29\n12\t60128185\t630298:1\tT\tT[12:60131254[\t99\tPASS\tDISC_MAPQ=59;EVDNC=DSCRD;IMPRECISE;MAPQ=59;MATEID=630298:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=12:60128185(+)-12:60131254(-)__12_60123001_60148001D;SPAN=3069;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:34:9:9.3:102.3,9.3,0:0:34:-102.3:102.3\n12\t60131254\t630298:2\tA\t]12:60128185]A\t99\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=630298:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=12:60128185(+)-12:60131254(-)__12_60123001_60148001D;SPAN=3069;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:34:9:9.3:102.3,9.3,0:0:34:-102.3:102.3\n12\t61767342\t630769:1\tA\t[12:61774625[A\t59\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;INSERTION=TTTCATTTTTT;MAPQ=60;MATEID=630769:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_61764501_61789501_34C;SPAN=7283;SUBN=1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:22:48:59.3:59.3,0,59.3:18:11:-59.13:59.13\n12\t61774625\t630769:2\tA\t[12:61767342[A\t59\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;INSERTION=TTTCATTTTTT;MAPQ=60;MATEID=630769:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_61764501_61789501_34C;SPAN=7283;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:22:48:59.3:59.3,0,59.3:18:11:-59.13:59.13\n12\t61805169\t630789:1\tT\t]17:59896324]T\t17\tPASS\tEVDNC=ASSMB;HOMSEQ=TAG;MAPQ=60;MATEID=630789:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_12_61789001_61814001_38C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:7:20:17.6:17.6,0,30.8:7:0:-17.49:17.74\n12\t62394097\t630980:1\tA\t]12:62450606]A\t33\tPASS\tDISC_MAPQ=58;EVDNC=ASDIS;HOMSEQ=A;MAPQ=60;MATEID=630980:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_62377001_62402001_36C;SPAN=56509;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:35:33.2:33.2,0,53:11:11:-33.08:33.38\n12\t62450606\t630980:2\tA\tA[12:62394097[\t33\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=A;MAPQ=60;MATEID=630980:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_62377001_62402001_36C;SPAN=56509;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:35:33.2:33.2,0,53:11:11:-33.08:33.38\n12\t62838638\t631147:1\tC\tC[12:62838950[\t99\tPASS\tEVDNC=ASSMB;HOMSEQ=AAGAATAATAGCTTCTC;MAPQ=60;MATEID=631147:2;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_12_62818001_62843001_7C;SPAN=312;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:34:28:9.3:102.3,9.3,0:34:0:-102.3:102.3\n12\t62838950\t631147:2\tA\t]12:62838638]A\t99\tPASS\tEVDNC=ASSMB;HOMSEQ=AAGAATAATAGCTTCTC;MAPQ=60;MATEID=631147:1;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_12_62818001_62843001_7C;SPAN=312;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:34:28:9.3:102.3,9.3,0:34:0:-102.3:102.3\n12\t63545291\t631382:1\tG\tG[12:63740374[\t17\tPASS\tDISC_MAPQ=55;EVDNC=DSCRD;IMPRECISE;MAPQ=55;MATEID=631382:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=12:63545291(+)-12:63740374(-)__12_63528501_63553501D;SPAN=195083;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:30:17.9:17.9,0,57.5:0:8:-17.98:19.13\n12\t63552952\t631386:1\tG\tG[12:63553177[\t85\tPASS\tEVDNC=ASSMB;HOMSEQ=AGG;MAPQ=60;MATEID=631386:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_63528501_63553501_13C;SPAN=225;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:28:27:7.8:85.8,7.8,0:28:0:-85.82:85.82\n12\t63553177\t631386:2\tA\t]12:63552952]A\t85\tPASS\tEVDNC=ASSMB;HOMSEQ=AGG;MAPQ=60;MATEID=631386:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_63528501_63553501_13C;SPAN=225;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:28:27:7.8:85.8,7.8,0:28:0:-85.82:85.82\n12\t63740374\t631382:2\tT\t]12:63545291]T\t17\tPASS\tDISC_MAPQ=59;EVDNC=DSCRD;IMPRECISE;MAPQ=59;MATEID=631382:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=12:63545291(+)-12:63740374(-)__12_63528501_63553501D;SPAN=195083;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:30:17.9:17.9,0,57.5:0:8:-17.98:19.13\n12\t65229310\t632064:1\tT\tT[12:110829790[\t17\tPASS\tEVDNC=ASSMB;INSERTION=AAG;MAPQ=60;MATEID=632064:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_65219001_65244001_43C;SPAN=45600480;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:7:21:17.3:17.3,0,33.8:7:0:-17.2:17.56\n12\t66737454\t632476:1\tT\tT[12:66738084[\t19\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=632476:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_66738001_66763001_6C;SPAN=630;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:7:12:9.8:19.7,0,9.8:7:0:-19.89:19.89\n12\t66738084\t632476:2\tA\t]12:66737454]A\t19\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=632476:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_66738001_66763001_6C;SPAN=630;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:7:12:9.8:19.7,0,9.8:7:0:-19.89:19.89\n12\t69153592\t648631:1\tA\t]12:118295227]A\t22\tPASS\tDISC_MAPQ=27;EVDNC=DSCRD;IMPRECISE;MAPQ=27;MATEID=648631:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=12:69153592(-)-12:118295227(+)__12_118286001_118311001D;SPAN=49141635;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:16:15.5:22.1,0,15.5:0:8:-21.93:21.93\n12\t70201197\t633448:1\tA\tA[12:70203785[\t99\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=633448:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=12:70201197(+)-12:70203785(-)__12_70192501_70217501D;SPAN=2588;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:43:25:12:132,12,0:0:43:-132:132\n12\t70203785\t633448:2\tA\t]12:70201197]A\t99\tPASS\tDISC_MAPQ=58;EVDNC=DSCRD;IMPRECISE;MAPQ=58;MATEID=633448:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=12:70201197(+)-12:70203785(-)__12_70192501_70217501D;SPAN=2588;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:43:25:12:132,12,0:0:43:-132:132\n12\t70478576\t633549:1\tT\tT[12:70484436[\t99\tPASS\tDISC_MAPQ=58;EVDNC=DSCRD;IMPRECISE;MAPQ=58;MATEID=633549:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=12:70478576(+)-12:70484436(-)__12_70462001_7048700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158.4\n12\t80454444\t635863:1\tA\t[12:80461951[A\t23\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=635863:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=12:80454444(-)-12:80461951(-)__12_80433501_80458501D;SPAN=7507;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:8:7:2.1:23.1,2.1,0:0:8:-23.11:23.11\n12\t80461951\t635863:2\tG\t[12:80454444[G\t23\tPASS\tDISC_MAPQ=42;EVDNC=DSCRD;IMPRECISE;MAPQ=42;MATEID=635863:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=12:80454444(-)-12:80461951(-)__12_80433501_80458501D;SPAN=7507;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:8:7:2.1:23.1,2.1,0:0:8:-23.11:23.11\n12\t83565451\t636682:1\tC\tC[12:83565755[\t29\tPASS\tEVDNC=ASSMB;HOMSEQ=AAGACTTGTACTC;MAPQ=60;MATEID=636682:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_83545001_83570001_69C;SPAN=304;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:26:29:29,0,35.6:11:0:-29:29.05\n12\t83565755\t636682:2\tA\t]12:83565451]A\t29\tPASS\tEVDNC=ASSMB;HOMSEQ=AAGACTTGTACTC;MAPQ=60;MATEID=636682:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_83545001_83570001_69C;SPAN=304;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:26:29:29,0,35.6:11:0:-29:29.05\n12\t83648505\t636707:1\tT\tT[12:83648804[\t79\tPASS\tEVDNC=ASSMB;HOMSEQ=AAAAAAAACAAATTT;MAPQ=60;MATEID=636707:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_12_83643001_83668001_134C;SPAN=299;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:27:34:3.8:79.7,0,3.8:27:0:-83.31:83.31\n12\t83648804\t636707:2\tA\t]12:83648505]A\t79\tPASS\tEVDNC=ASSMB;HOMSEQ=AAAAAAAACAAATTT;MAPQ=60;MATEID=636707:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_12_83643001_83668001_134C;SPAN=299;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:27:34:3.8:79.7,0,3.8:27:0:-83.31:83.31\n12\t84058958\t636884:1\tC\t]12:84059687]C\t37\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=CT;MAPQ=60;MATEID=636884:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_84059501_84084501_4C;SPAN=729;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:19:8:37.7,0,8:6:10:-38.44:38.44\n12\t84059687\t636884:2\tT\tT[12:84058958[\t37\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=CT;MAPQ=60;MATEID=636884:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_84059501_84084501_4C;SPAN=729;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:19:8:37.7,0,8:6:10:-38.44:38.44\n12\t84199335\t636931:1\tA\tA[12:84202233[\t85\tPASS\tEVDNC=ASSMB;HOMSEQ=GCCTCA;MAPQ=60;MATEID=636931:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_84182001_84207001_67C;SPAN=2898;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:28:25:7.8:85.8,7.8,0:28:0:-85.82:85.82\n12\t84202233\t636931:2\tG\t]12:84199335]G\t85\tPASS\tEVDNC=ASSMB;HOMSEQ=GCCTCA;MAPQ=60;MATEID=636931:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_84182001_84207001_67C;SPAN=2898;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:28:25:7.8:85.8,7.8,0:28:0:-85.82:85.82\n12\t86129547\t637649:1\tT\tT[12:86129858[\t79\tPASS\tEVDNC=ASSMB;HOMSEQ=CACAATCTTT;MAPQ=60;MATEID=637649:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_86117501_86142501_101C;SPAN=311;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:26:26:7.2:79.2,7.2,0:26:0:-79.22:79.22\n12\t86129858\t637649:2\tC\t]12:86129547]C\t79\tPASS\tEVDNC=ASSMB;HOMSEQ=CACAATCTTT;MAPQ=60;MATEID=637649:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_86117501_86142501_101C;SPAN=311;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:26:26:7.2:79.2,7.2,0:26:0:-79.22:79.22\n12\t86259796\t988096:1\tT\t]Un_KN707677v1_decoy:7267]T\t89\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=988096:2;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_528_1_7267_0C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:29:7:8.1:89.1,8.1,0:29:0:-89.12:89.12\n12\t90223562\t638867:1\tT\t]12:90223665]T\t48\tPASS\tEVDNC=ASSMB;HOMSEQ=TATATATCCTATATATATACATATATACTATAGT;MAPQ=35;MATEID=638867:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_90209001_90234001_76C;SPAN=103;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:18:38:45.5:48.8,0,45.5:18:0:-48.74:48.74\n12\t90223665\t638867:2\tT\tT[12:90223562[\t48\tPASS\tEVDNC=ASSMB;HOMSEQ=TATATATCCTATATATATACATATATACTATAGT;MAPQ=60;MATEID=638867:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_90209001_90234001_76C;SPAN=103;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:18:38:45.5:48.8,0,45.5:18:0:-48.74:48.74\n12\t93500781\t640053:1\tC\t]12:93501896]C\t83\tPASS\tEVDNC=ASSMB;INSERTION=AAATTAAA;MAPQ=60;MATEID=640053:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_93492001_93517001_1C;SPAN=1115;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:29:44:27.2:83.3,0,27.2:29:0:-84.92:84.92\n12\t93501029\t640054:1\tG\tG[12:93501904[\t99\tPASS\tEVDNC=ASSMB;HOMSEQ=GG;MAPQ=60;MATEID=640054:2;MATENM=2;NM=2;NUMPARTS=2;SCTG=c_12_93492001_93517001_80C;SPAN=875;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:34:43:7.7:100.1,0,7.7:34:0:-104.8:104.8\n12\t93501896\t640053:2\tT\tT[12:93500781[\t83\tPASS\tEVDNC=ASSMB;INSERTION=AAATTAAA;MAPQ=60;MATEID=640053:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_93492001_93517001_1C;SPAN=1115;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:29:44:27.2:83.3,0,27.2:29:0:-84.92:84.92\n12\t93501904\t640054:2\tG\t]12:93501029]G\t99\tPASS\tEVDNC=ASSMB;HOMSEQ=GG;MAPQ=60;MATEID=640054:1;MATENM=2;NM=2;NUMPARTS=2;SCTG=c_12_93492001_93517001_80C;SPAN=875;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:34:43:7.7:100.1,0,7.7:34:0:-104.8:104.8\n12\t93964568\t640176:1\tG\tG[12:93964865[\t25\tPASS\tEVDNC=ASSMB;HOMSEQ=AGAATTAGGAGCTGGG;MAPQ=60;MATEID=640176:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_12_93957501_93982501_64C;SPAN=297;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:27:25.4:25.4,0,41.9:10:0:-25.42:25.66\n12\t93964865\t640176:2\tA\t]12:93964568]A\t25\tPASS\tEVDNC=ASSMB;HOMSEQ=AGAATTAGGAGCTGGG;MAPQ=60;MATEID=640176:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_12_93957501_93982501_64C;SPAN=297;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:27:25.4:25.4,0,41.9:10:0:-25.42:25.66\n12\t95839932\t641035:1\tG\tG[12:95842549[\t69\tPASS\tDISC_MAPQ=56;EVDNC=DSCRD;IMPRECISE;MAPQ=56;MATEID=641035:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=12:95839932(+)-12:95842549(-)__12_95819501_95844501D;SPAN=2617;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:23:20:6.3:69.3,6.3,0:0:23:-69.32:69.32\n12\t95842549\t641035:2\tA\t]12:95839932]A\t69\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=641035:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=12:95839932(+)-12:95842549(-)__12_95819501_95844501D;SPAN=2617;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:23:20:6.3:69.3,6.3,0:0:23:-69.32:69.32\n12\t95946577\t641078:1\tC\tC[12:95949177[\t99\tPASS\tEVDNC=ASSMB;HOMSEQ=AAGAGACTGC;MAPQ=60;MATEID=641078:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_12_95942001_95967001_32C;SPAN=2600;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:39:70:66.2:109.1,0,66.2:39:0:-109.6:109.6\n12\t95949177\t641078:2\tA\t]12:95946577]A\t99\tPASS\tEVDNC=ASSMB;HOMSEQ=AAGAGACTGC;MAPQ=60;MATEID=641078:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_12_95942001_95967001_32C;SPAN=2600;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:39:70:66.2:109.1,0,66.2:39:0:-109.6:109.6\n12\t97093816\t641559:1\tT\tT[12:97094584[\t13\tPASS\tEVDNC=ASSMB;HOMSEQ=TT;MAPQ=60;MATEID=641559:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_12_97093501_97118501_32C;SPAN=768;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:7:36:13.1:13.1,0,75.8:7:0:-12.99:15.64\n12\t97094584\t641559:2\tT\t]12:97093816]T\t13\tPASS\tEVDNC=ASSMB;HOMSEQ=TT;MAPQ=60;MATEID=641559:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_12_97093501_97118501_32C;SPAN=768;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:7:36:13.1:13.1,0,75.8:7:0:-12.99:15.64\n12\t97160963\t641593:1\tT\tT[12:97161278[\t99\tPASS\tEVDNC=ASSMB;HOMSEQ=GAGCTTGGTGTTTT;MAPQ=60;MATEID=641593:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_12_97142501_97167501_30C;SPAN=315;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:37:29:10.2:112.2,10.2,0:37:0:-112.2:112.2\n12\t97161278\t641593:2\tG\t]12:97160963]G\t99\tPASS\tEVDNC=ASSMB;HOMSEQ=GAGCTTGGTGTTTT;MAPQ=60;MATEID=641593:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_12_97142501_97167501_30C;SPAN=315;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:37:29:10.2:112.2,10.2,0:37:0:-112.2:112.2\n12\t98569527\t642178:1\tT\tT[12:99037303[\t26\tPASS\tEVDNC=ASSMB;HOMSEQ=T;MAPQ=60;MATEID=642178:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_99029001_99054001_31C;SPAN=467776;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:13:6.2:26,0,6.2:9:0:-26.69:26.69\n12\t99037303\t642178:2\tT\t]12:98569527]T\t26\tPASS\tEVDNC=ASSMB;HOMSEQ=T;MAPQ=60;MATEID=642178:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_99029001_99054001_31C;SPAN=467776;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:13:6.2:26,0,6.2:9:0:-26.69:26.69\n12\t100282199\t642588:1\tA\tA[12:100282483[\t99\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=GCCTGGCTAATTTTTGTA;MAPQ=60;MATEID=642588:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_100278501_100303501_22C;SPAN=284;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:38:27:10.5:115.5,10.5,0:30:9:-115.5:115.5\n12\t100282483\t642588:2\tG\t]12:100282199]G\t99\tPASS\tDISC_MAPQ=58;EVDNC=ASDIS;HOMSEQ=GCCTGGCTAATTTTTGTA;MAPQ=60;MATEID=642588:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_100278501_100303501_22C;SPAN=284;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:38:27:10.5:115.5,10.5,0:30:9:-115.5:115.5\n12\t100627443\t642686:1\tT\t]12:100717132]T\t26\tPASS\tDISC_MAPQ=49;EVDNC=ASDIS;INSERTION=GCAAAC;MAPQ=60;MATEID=642686:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_100695001_100720001_30C;SPAN=89689;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:12:3.2:26.3,0,3.2:7:4:-27.29:27.29\n12\t100717132\t642686:2\tG\tG[12:100627443[\t26\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;INSERTION=GCAAAC;MAPQ=60;MATEID=642686:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_100695001_100720001_30C;SPAN=89689;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:12:3.2:26.3,0,3.2:7:4:-27.29:27.29\n12\t101708632\t643044:1\tG\tG[12:101713309[\t14\tPASS\tEVDNC=ASSMB;HOMSEQ=ACAG;MAPQ=60;MATEID=643044:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_101699501_101724501_55C;SPAN=4677;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:7:31:14.6:14.6,0,60.8:7:0:-14.39:16.16\n12\t101713309\t643044:2\tA\t]12:101708632]A\t14\tPASS\tEVDNC=ASSMB;HOMSEQ=ACAG;MAPQ=60;MATEID=643044:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_101699501_101724501_55C;SPAN=4677;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:7:31:14.6:14.6,0,60.8:7:0:-14.39:16.16\n12\t103965852\t651667:1\tG\t[12:125316602[G\t99\tPASS\tDISC_MAPQ=55;EVDNC=ASDIS;MAPQ=60;MATEID=651667:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_12_125293001_125318001_45C;SPAN=21350750;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:47:23:12.9:141.9,12.9,0:39:13:-141.9:141.9\n12\t103985728\t643737:1\tA\tA[12:103986948[\t26\tPASS\tDISC_MAPQ=15;EVDNC=ASDIS;MAPQ=60;MATEID=643737:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_103978001_104003001_17C;SPAN=1220;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:45:26.9:26.9,0,86.3:9:3:-26.96:28.7\n12\t103986948\t643737:2\tT\t]12:103985728]T\t26\tPASS\tDISC_MAPQ=35;EVDNC=ASDIS;MAPQ=48;MATEID=643737:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_103978001_104003001_17C;SPAN=1220;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:45:26.9:26.9,0,86.3:9:3:-26.96:28.7\n12\t103988861\t643740:1\tA\tA]12:125316718]\t75\tPASS\tDISC_MAPQ=15;EVDNC=DSCRD;IMPRECISE;MAPQ=15;MATEID=643740:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=12:103988861(+)-12:125316718(+)__12_103978001_104003001D;SPAN=21327857;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:25:29:1.5:75.9,1.5,0:0:25:-79.34:79.34\n12\t104125233\t126956:2\tT\t]2:171438928]T\t99\tPASS\tDISC_MAPQ=0;EVDNC=TSI_L;HOMSEQ=TCAGTC;MAPQ=60;MATEID=126956:1;MATENM=2;NM=0;NUMPARTS=3;SCTG=c_2_171426501_171451501_8C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:47:30:12.9:141.9,12.9,0:46:9:-141.9:141.9\n12\t104975278\t644146:1\tA\tA[12:104979768[\t92\tPASS\tEVDNC=ASSMB;HOMSEQ=TATA;MAPQ=60;MATEID=644146:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_104958001_104983001_9C;SPAN=4490;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:30:24:8.4:92.4,8.4,0:30:0:-92.42:92.42\n12\t104979768\t644146:2\tT\t]12:104975278]T\t92\tPASS\tEVDNC=ASSMB;HOMSEQ=TATA;MAPQ=60;MATEID=644146:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_104958001_104983001_9C;SPAN=4490;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:30:24:8.4:92.4,8.4,0:30:0:-92.42:92.42\n12\t107809482\t420918:2\tA\t]7:111413698]A\t75\tPASS\tEVDNC=ASSMB;HOMSEQ=AA;MAPQ=60;MATEID=420918:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_7_111401501_111426501_27C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:25:22:6.9:75.9,6.9,0:25:0:-75.92:75.92\n12\t107828783\t644977:1\tA\tA[12:107829087[\t41\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AAAAGCTGGTCCA;MAPQ=60;MATEID=644977:2;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_12_107824501_107849501_47C;SPAN=304;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:15:30:34.4:41,0,34.4:12:6:-41.11:41.11\n12\t107829087\t644977:2\tA\t]12:107828783]A\t41\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AAAAGCTGGTCCA;MAPQ=60;MATEID=644977:1;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_12_107824501_107849501_47C;SPAN=304;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:15:30:34.4:41,0,34.4:12:6:-41.11:41.11\n12\t107971134\t645049:1\tT\t[12:107972746[T\t27\tPASS\tDISC_MAPQ=34;EVDNC=ASDIS;HOMSEQ=TTCTG;MAPQ=0;MATEID=645049:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_107971501_107996501_18C;SPAN=1612;SUBN=6;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:30:27.8:27.8,0,47.6:9:6:-27.88:28.16\n12\t107972746\t645049:2\tC\t[12:107971134[C\t27\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TTCTG;MAPQ=60;MATEID=645049:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_107971501_107996501_18C;SPAN=1612;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:30:27.8:27.8,0,47.6:9:6:-27.88:28.16\n12\t107973569\t645044:2\tT\tT[1:114957233[\t19\tPASS\tEVDNC=ASSMB;HOMSEQ=TT;MAPQ=60;MATEID=645044:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_12_107971501_107996501_49C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:25:19.4:19.4,0,42.5:8:0:-19.38:19.89\n12\t109661407\t645728:1\tA\t]12:109661985]A\t52\tPASS\tDISC_MAPQ=49;EVDNC=DSCRD;IMPRECISE;MAPQ=49;MATEID=645728:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=12:109661407(-)-12:109661985(+)__12_109637501_109662501D;SPAN=578;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:21:61:52.4:52.4,0,98.6:0:21:-52.17:53.04\n12\t109661985\t645728:2\tT\tT[12:109661407[\t52\tPASS\tDISC_MAPQ=36;EVDNC=DSCRD;IMPRECISE;MAPQ=36;MATEID=645728:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=12:109661407(-)-12:109661985(+)__12_109637501_109662501D;SPAN=578;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:21:61:52.4:52.4,0,98.6:0:21:-52.17:53.04\n12\t109868246\t645814:1\tA\t[12:109912750[A\t33\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AGTG;MAPQ=60;MATEID=645814:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_109858001_109883001_7C;SPAN=44504;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:21:17.3:33.8,0,17.3:11:5:-33.92:33.92\n12\t109912750\t645814:2\tC\t[12:109868246[C\t33\tPASS\tDISC_MAPQ=59;EVDNC=ASDIS;HOMSEQ=AGTG;MAPQ=60;MATEID=645814:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_109858001_109883001_7C;SPAN=44504;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:21:17.3:33.8,0,17.3:11:5:-33.92:33.92\n12\t110216250\t645904:1\tG\tG[12:110216550[\t9\tPASS\tEVDNC=ASSMB;HOMSEQ=CTCTGTTGCCCAGGCTGGAGTGCAGTGG;MAPQ=60;MATEID=645904:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_110201001_110226001_19C;SPAN=300;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:6:36:9.8:9.8,0,79.1:6:0:-9.687:12.96\n12\t110216550\t645904:2\tC\t]12:110216250]C\t9\tPASS\tEVDNC=ASSMB;HOMSEQ=CTCTGTTGCCCAGGCTGGAGTGCAGTGG;MAPQ=60;MATEID=645904:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_110201001_110226001_19C;SPAN=300;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:6:36:9.8:9.8,0,79.1:6:0:-9.687:12.96\n12\t110829790\t632064:2\tA\t]12:65229310]A\t17\tPASS\tEVDNC=ASSMB;INSERTION=AAG;MAPQ=60;MATEID=632064:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_65219001_65244001_43C;SPAN=45600480;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:7:21:17.3:17.3,0,33.8:7:0:-17.2:17.56\n12\t114529434\t647132:1\tA\t]12:114549384]A\t34\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;INSERTION=A;MAPQ=60;MATEID=647132:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_12_114537501_114562501_41C;SPAN=19950;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:18:8.3:34.7,0,8.3:8:7:-35.24:35.24\n12\t114549384\t647132:2\tT\tT[12:114529434[\t34\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;INSERTION=A;MAPQ=60;MATEID=647132:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_12_114537501_114562501_41C;SPAN=19950;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:18:8.3:34.7,0,8.3:8:7:-35.24:35.24\n12\t118295227\t648631:2\tG\tG[12:69153592[\t22\tPASS\tDISC_MAPQ=55;EVDNC=DSCRD;IMPRECISE;MAPQ=55;MATEID=648631:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=12:69153592(-)-12:118295227(+)__12_118286001_118311001D;SPAN=49141635;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:16:15.5:22.1,0,15.5:0:8:-21.93:21.93\n12\t119585902\t649147:1\tA\tA[12:119587086[\t67\tPASS\tDISC_MAPQ=52;EVDNC=ASDIS;HOMSEQ=GCCTCCCAAAGTGCTGGGATTACAGGCATGA;MAPQ=60;MATEID=649147:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_119584501_119609501_35C;SPAN=1184;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:23:29:5:67.7,0,5:15:15:-70.94:70.94\n12\t119587086\t649147:2\tG\t]12:119585902]G\t67\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=GCCTCCCAAAGTGCTGGGATTACAGGCATGA;MAPQ=60;MATEID=649147:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_119584501_119609501_35C;SPAN=1184;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:23:29:5:67.7,0,5:15:15:-70.94:70.94\n12\t120852804\t649669:1\tA\t]12:120852878]A\t69\tPASS\tEVDNC=ASSMB;INSERTION=GATATATGAAATACATATTTCATATAATATATACATATG;MAPQ=60;MATEID=649669:2;MATENM=2;NM=3;NUMPARTS=2;SCTG=c_12_120834001_120859001_57C;SPAN=74;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:26:57:69.8:69.8,0,73.1:26:0:-69.8:69.81\n12\t120852878\t649669:2\tT\tT[12:120852804[\t69\tPASS\tEVDNC=ASSMB;INSERTION=GATATATGAAATACATATTTCATATAATATATACATATG;MAPQ=60;MATEID=649669:1;MATENM=3;NM=2;NUMPARTS=2;SCTG=c_12_120834001_120859001_57C;SPAN=74;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:26:57:69.8:69.8,0,73.1:26:0:-69.8:69.81\n12\t124438685\t651290:1\tA\t]12:124439523]A\t38\tPASS\tDISC_MAPQ=22;EVDNC=DSCRD;IMPRECISE;MAPQ=22;MATEID=651290:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=12:124438685(-)-12:124439523(+)__12_124435501_124460501D;SPAN=838;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:15:39:38.6:38.6,0,58.4:0:15:-38.55:38.8\n12\t124439523\t651290:2\tG\tG[12:124438685[\t38\tPASS\tDISC_MAPQ=25;EVDNC=DSCRD;IMPRECISE;MAPQ=25;MATEID=651290:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=12:124438685(-)-12:124439523(+)__12_124435501_124460501D;SPAN=838;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:15:39:38.6:38.6,0,58.4:0:15:-38.55:38.8\n12\t124849873\t651462:1\tG\tG[12:124850162[\t62\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=CAGGAGTTCCAGACCAGCCTGG;MAPQ=60;MATEID=651462:2;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_12_124827501_124852501_120C;SPAN=289;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:21:26:2.6:62,0,2.6:14:11:-65.14:65.14\n12\t124850162\t651462:2\tC\t]12:124849873]C\t62\tPASS\tDISC_MAPQ=59;EVDNC=ASDIS;HOMSEQ=CAGGAGTTCCAGACCAGCCTGG;MAPQ=60;MATEID=651462:1;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_12_124827501_124852501_120C;SPAN=289;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:21:26:2.6:62,0,2.6:14:11:-65.14:65.14\n12\t125114682\t651626:1\tC\tC[12:125114918[\t23\tPASS\tEVDNC=ASSMB;HOMSEQ=CACATGGTAAGGGCTTCCCC;MAPQ=60;MATEID=651626:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_125097001_125122001_36C;SPAN=236;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:34:23.6:23.6,0,59.9:10:0:-23.45:24.42\n12\t125114918\t651626:2\tC\t]12:125114682]C\t23\tPASS\tEVDNC=ASSMB;HOMSEQ=CACATGGTAAGGGCTTCCCC;MAPQ=60;MATEID=651626:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_125097001_125122001_36C;SPAN=236;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:34:23.6:23.6,0,59.9:10:0:-23.45:24.42\n12\t125316601\t619289:2\tA\t[12:25803192[A\t52\tPASS\tDISC_MAPQ=57;EVDNC=DSCRD;IMPRECISE;MAPQ=57;MATEID=619289:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=12:25803192(-)-12:125316601(-)__12_25798501_25823501D;SPAN=99513409;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:18:10:4.8:52.8,4.8,0:0:18:-52.81:52.81\n12\t125316602\t651667:2\tC\t[12:103965852[C\t99\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;MAPQ=60;MATEID=651667:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_12_125293001_125318001_45C;SPAN=21350750;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:47:23:12.9:141.9,12.9,0:39:13:-141.9:141.9\n12\t125316718\t643740:2\tC\tC]12:103988861]\t75\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=643740:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=12:103988861(+)-12:125316718(+)__12_103978001_104003001D;SPAN=21327857;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:25:29:1.5:75.9,1.5,0:0:25:-79.34:79.34\n12\t126832129\t652191:2\tC\t[2:74561101[C\t51\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=CTCCTCCTCCTTCTCCTCCTCCTCCTTCTCCTCCTCCTCCTTCTCCTCCTCCT;MAPQ=60;MATEID=652191:1;MATENM=8;NM=0;NUMPARTS=2;SCTG=c_12_126812001_126837001_50C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:18:27:15.5:51.8,0,15.5:12:4:-52.86:52.86\n12\t127040067\t652330:1\tT\tT[12:127040673[\t47\tPASS\tEVDNC=ASSMB;HOMSEQ=CTAT;MAPQ=60;MATEID=652330:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_127032501_127057501_17C;SPAN=606;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:17:30:27.8:47.6,0,27.8:17:0:-47.96:47.96\n12\t127040673\t652330:2\tC\t]12:127040067]C\t47\tPASS\tEVDNC=ASSMB;HOMSEQ=CTAT;MAPQ=60;MATEID=652330:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_127032501_127057501_17C;SPAN=606;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:17:30:27.8:47.6,0,27.8:17:0:-47.96:47.96\n12\t127310968\t652478:1\tT\tT[12:127311375[\t9\tPASS\tEVDNC=ASSMB;HOMSEQ=T;MAPQ=60;MATEID=652478:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_127302001_127327001_104C;SPAN=407;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:6:36:9.8:9.8,0,79.1:6:0:-9.687:12.96\n12\t127311375\t652478:2\tT\t]12:127310968]T\t9\tPASS\tEVDNC=ASSMB;HOMSEQ=T;MAPQ=60;MATEID=652478:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_127302001_127327001_104C;SPAN=407;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:6:36:9.8:9.8,0,79.1:6:0:-9.687:12.96\n12\t127553449\t652605:1\tT\tT[12:127553750[\t45\tPASS\tEVDNC=ASSMB;HOMSEQ=CTGTTTCTTTTCTTCTT;MAPQ=60;MATEID=652605:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_12_127547001_127572001_127C;SPAN=301;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:16:26:19.1:45.5,0,19.1:16:0:-46.05:46.05\n12\t127553750\t652605:2\tC\t]12:127553449]C\t45\tPASS\tEVDNC=ASSMB;HOMSEQ=CTGTTTCTTTTCTTCTT;MAPQ=60;MATEID=652605:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_12_127547001_127572001_127C;SPAN=301;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:16:26:19.1:45.5,0,19.1:16:0:-46.05:46.05\n12\t129235285\t653458:1\tT\tT[12:129235878[\t19\tPASS\tEVDNC=ASSMB;HOMSEQ=AT;MAPQ=60;MATEID=653458:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_12_129213001_129238001_115C;SPAN=593;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:36:19.7:19.7,0,69.2:9:0:-19.59:21.23\n12\t129235878\t653458:2\tA\t]12:129235285]A\t19\tPASS\tEVDNC=ASSMB;HOMSEQ=AT;MAPQ=60;MATEID=653458:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_12_129213001_129238001_115C;SPAN=593;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:36:19.7:19.7,0,69.2:9:0:-19.59:21.23\n12\t129575758\t653630:1\tT\tT[12:129576074[\t92\tPASS\tEVDNC=ASSMB;HOMSEQ=CAGATAGATACATTTT;MAPQ=60;MATEID=653630:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_129556001_129581001_93C;SPAN=316;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:30:28:8.4:92.4,8.4,0:30:0:-92.42:92.42\n12\t129576074\t653630:2\tC\t]12:129575758]C\t92\tPASS\tEVDNC=ASSMB;HOMSEQ=CAGATAGATACATTTT;MAPQ=60;MATEID=653630:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_129556001_129581001_93C;SPAN=316;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:30:28:8.4:92.4,8.4,0:30:0:-92.42:92.42\n12\t130043305\t653846:1\tA\t]12:130043472]A\t22\tPASS\tEVDNC=ASSMB;HOMSEQ=ACACATGCACACAC;MAPQ=60;MATEID=653846:2;MATENM=1;NM=2;NUMPARTS=2;SCTG=c_12_130021501_130046501_3C;SPAN=167;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:60:22.7:22.7,0,128.3:12:0:-22.75:26.98\n12\t130043472\t653846:2\tC\tC[12:130043305[\t22\tPASS\tEVDNC=ASSMB;HOMSEQ=ACACATGCACACAC;MAPQ=60;MATEID=653846:1;MATENM=2;NM=1;NUMPARTS=2;SCTG=c_12_130021501_130046501_3C;SPAN=167;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:60:22.7:22.7,0,128.3:12:0:-22.75:26.98\n12\t131226570\t654514:1\tA\t[12:131439049[A\t18\tPASS\tDISC_MAPQ=52;EVDNC=DSCRD;IMPRECISE;MAPQ=52;MATEID=654514:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=12:131226570(-)-12:131439049(-)__12_131418001_131443001D;SPAN=212479;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:29:18.2:18.2,0,54.5:0:8:-18.26:19.27\n12\t131268105\t654494:1\tG\tG]12:131402665]\t46\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=654494:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=12:131268105(+)-12:131402665(+)__12_131393501_131418501D;SPAN=134560;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:15:14:4.2:46.2,4.2,0:0:15:-46.21:46.21\n12\t131402665\t654494:2\tA\tA]12:131268105]\t46\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=654494:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=12:131268105(+)-12:131402665(+)__12_131393501_131418501D;SPAN=134560;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:15:14:4.2:46.2,4.2,0:0:15:-46.21:46.21\n12\t131432986\t654517:1\tT\t]12:131433079]T\t39\tPASS\tEVDNC=ASSMB;HOMSEQ=TCCTCTCCCCTGTGTCCCGGCATCCCCCGCAT;MAPQ=36;MATEID=654517:2;MATENM=4;NM=2;NUMPARTS=2;SCTG=c_12_131418001_131443001_65C;SPAN=93;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:13:13:3.6:39.6,3.6,0:13:0:-39.61:39.61\n12\t131433079\t654517:2\tT\tT[12:131432986[\t39\tPASS\tEVDNC=ASSMB;HOMSEQ=TCCTCTCCCCTGTGTCCCGGCATCCCCCGCAT;MAPQ=60;MATEID=654517:1;MATENM=2;NM=4;NUMPARTS=2;SCTG=c_12_131418001_131443001_65C;SPAN=93;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:13:13:3.6:39.6,3.6,0:13:0:-39.61:39.61\n12\t131439049\t654514:2\tC\t[12:131226570[C\t18\tPASS\tDISC_MAPQ=53;EVDNC=DSCRD;IMPRECISE;MAPQ=53;MATEID=654514:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=12:131226570(-)-12:131439049(-)__12_131418001_131443001D;SPAN=212479;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:29:18.2:18.2,0,54.5:0:8:-18.26:19.27\n12\t131613513\t654667:1\tT\tT]12:131633939]\t49\tPASS\tDISC_MAPQ=58;EVDNC=DSCRD;IMPRECISE;MAPQ=58;MATEID=654667:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=12:131613513(+)-12:131633939(+)__12_131614001_131639001D;SPAN=20426;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:17:17:4.5:49.5,4.5,0:0:17:-49.51:49.51\n12\t131614588\t654668:1\tC\t[12:131633895[C\t52\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=C;MAPQ=60;MATEID=654668:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_131614001_131639001_72C;SPAN=19307;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:18:18:4.8:52.8,4.8,0:8:11:-52.81:52.81\n12\t131633895\t654668:2\tG\t[12:131614588[G\t52\tPASS\tDISC_MAPQ=23;EVDNC=ASDIS;HOMSEQ=C;MAPQ=43;MATEID=654668:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_131614001_131639001_72C;SPAN=19307;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:18:18:4.8:52.8,4.8,0:8:11:-52.81:52.81\n12\t131633939\t654667:2\tC\tC]12:131613513]\t49\tPASS\tDISC_MAPQ=45;EVDNC=DSCRD;IMPRECISE;MAPQ=45;MATEID=654667:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=12:131613513(+)-12:131633939(+)__12_131614001_131639001D;SPAN=20426;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:17:17:4.5:49.5,4.5,0:0:17:-49.51:49.51\n12\t131779209\t654749:1\tG\t]12:131779312]G\t28\tPASS\tEVDNC=ASSMB;HOMSEQ=GTGTGTGAAGAGGGCGGCGC;MAPQ=25;MATEID=654749:2;MATENM=4;NM=1;NUMPARTS=2;SCTG=c_12_131761001_131786001_4C;SPAN=103;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:41:28.1:28.1,0,74.3:12:0:-28.09:29.28\n12\t131779312\t654749:2\tC\tC[12:131779209[\t28\tPASS\tEVDNC=ASSMB;HOMSEQ=GTGTGTGAAGAGGGCGGCGC;MAPQ=60;MATEID=654749:1;MATENM=1;NM=4;NUMPARTS=2;SCTG=c_12_131761001_131786001_4C;SPAN=103;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:41:28.1:28.1,0,74.3:12:0:-28.09:29.28\n12\t132397258\t654980:1\tG\t]12:132397846]G\t22\tPASS\tDISC_MAPQ=53;EVDNC=ASDIS;HOMSEQ=GCCCTCCCCGGGGCCCCTCCTGGGCTTTCACCTGCGTCTCTGGG;MAPQ=60;MATEID=654980:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_132373501_132398501_39C;SPAN=588;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:27:22.1:22.1,0,45.2:4:7:-22.12:22.58\n12\t132397846\t654980:2\tG\tG[12:132397258[\t22\tPASS\tDISC_MAPQ=56;EVDNC=ASDIS;HOMSEQ=GCCCTCCCCGGGGCCCCTCCTGGGCTTTCACCTGCGTCTCTGGG;MAPQ=60;MATEID=654980:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_132373501_132398501_39C;SPAN=588;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:27:22.1:22.1,0,45.2:4:7:-22.12:22.58\n12\t132411313\t654995:1\tC\t]12:132411391]C\t28\tPASS\tDISC_MAPQ=255;EVDNC=TSI_G;HOMSEQ=ACACGGGCACCCACACACACACA;INSERTION=CAACACAGGCCCACACGCACCCGTGCACACACAGGCCTCCCACACACACACAGGCACT;MAPQ=60;MATEID=654995:2;MATENM=5;NM=2;NUMPARTS=3;SCTG=c_12_132398001_132423001_44C;SPAN=78;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:41:28.1:28.1,0,74.3:12:0:-28.09:29.28\n12\t132411391\t654995:2\tA\tA[12:132411313[\t28\tPASS\tDISC_MAPQ=255;EVDNC=TSI_G;HOMSEQ=ACACGGGCACCCACACACACACA;INSERTION=CAACACAGGCCCACACGCACCCGTGCACACACAGGCCTCCCACACACACACAGGCACT;MAPQ=60;MATEID=654995:1;MATENM=2;NM=5;NUMPARTS=3;SCTG=c_12_132398001_132423001_44C;SPAN=78;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:41:28.1:28.1,0,74.3:12:0:-28.09:29.28\n12\t132473094\t655080:1\tT\tT[12:132474099[\t33\tPASS\tDISC_MAPQ=50;EVDNC=DSCRD;IMPRECISE;MAPQ=50;MATEID=655080:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=12:132473094(+)-12:132474099(-)__12_132471501_132496501D;SPAN=1005;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:11:13:0.3:33,0.3,0:0:11:-34.67:34.67\n12\t132474099\t655080:2\tT\t]12:132473094]T\t33\tPASS\tDISC_MAPQ=54;EVDNC=DSCRD;IMPRECISE;MAPQ=54;MATEID=655080:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=12:132473094(+)-12:132474099(-)__12_132471501_132496501D;SPAN=1005;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:11:13:0.3:33,0.3,0:0:11:-34.67:34.67\n12\t132474348\t655090:1\tC\t]12:132542292]C\t25\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=C;MAPQ=60;MATEID=655090:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_132520501_132545501_33C;SPAN=67944;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:26:25.7:25.7,0,38.9:7:8:-25.7:25.87\n12\t132542292\t655090:2\tC\tC[12:132474348[\t25\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=C;MAPQ=60;MATEID=655090:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_132520501_132545501_33C;SPAN=67944;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:26:25.7:25.7,0,38.9:7:8:-25.7:25.87\n12\t132742761\t655207:2\tC\t]1:6937887]C\t20\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=655207:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:6937887(+)-12:132742761(-)__12_132741001_132766001D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:35:20:20,0,66.2:0:9:-19.87:21.36\n13\t16000705\t655427:1\tA\tA[13:16006260[\t42\tPASS\tDISC_MAPQ=23;EVDNC=DSCRD;IMPRECISE;MAPQ=23;MATEID=655427:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16000705(+)-13:16006260(-)__13_15998501_16023501D;SPAN=5555;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:14:5:3.9:42.9,3.9,0:0:14:-42.91:42.91\n13\t16001321\t655429:1\tG\t]13:16018130]G\t0\tPASS\tDISC_MAPQ=41;EVDNC=DSCRD;IMPRECISE;MAPQ=41;MATEID=655429:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16001321(-)-13:16018130(+)__13_15998501_16023501D;SPAN=16809;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/0:16:276:24.4:0,24.4,742.6:0:16:24.77:26.82\n13\t16001617\t655434:1\tC\tC[13:16012944[\t7\tPASS\tDISC_MAPQ=25;EVDNC=DSCRD;IMPRECISE;MAPQ=25;MATEID=655434:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16001617(+)-13:16012944(-)__13_15998501_16023501D;SPAN=11327;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:91:7.7:7.7,0,218.9:0:10:-7.431:19.65\n13\t16002842\t655447:1\tT\t]13:16014050]T\t4\tPASS\tDISC_MAPQ=16;EVDNC=DSCRD;IMPRECISE;MAPQ=16;MATEID=655447:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16002842(-)-13:16014050(+)__13_15998501_16023501D;SPAN=11208;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:102:4.4:4.4,0,251.9:0:10:-4.339:19.13\n13\t16005128\t655459:1\tT\tT[13:16016361[\t47\tPASS\tDISC_MAPQ=18;EVDNC=DSCRD;IMPRECISE;MAPQ=18;MATEID=655459:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16005128(+)-13:16016361(-)__13_15998501_16023501D;SPAN=11233;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:22:88:47.9:47.9,0,173.3:0:22:-47.89:51.9\n13\t16006260\t655427:2\tG\t]13:16000705]G\t42\tPASS\tDISC_MAPQ=18;EVDNC=DSCRD;IMPRECISE;MAPQ=18;MATEID=655427:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16000705(+)-13:16006260(-)__13_15998501_16023501D;SPAN=5555;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:14:5:3.9:42.9,3.9,0:0:14:-42.91:42.91\n13\t16009131\t655481:1\tG\tG[13:16020430[\t41\tPASS\tDISC_MAPQ=29;EVDNC=DSCRD;IMPRECISE;MAPQ=29;MATEID=655481:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16009131(+)-13:16020430(-)__13_15998501_16023501D;SPAN=11299;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:16:42:41:41,0,64.1:0:16:-41.01:41.3\n13\t16010771\t655489:1\tA\tA[13:16016355[\t1\tPASS\tDISC_MAPQ=32;EVDNC=DSCRD;IMPRECISE;MAPQ=32;MATEID=655489:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16010771(+)-13:16016355(-)__13_15998501_16023501D;SPAN=5584;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:102:1.1:1.1,0,255.2:0:9:-1.038:16.79\n13\t16011227\t655498:1\tA\t]13:16022545]A\t0\tPASS\tDISC_MAPQ=19;EVDNC=DSCRD;IMPRECISE;MAPQ=19;MATEID=655498:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16011227(-)-13:16022545(+)__13_15998501_16023501D;SPAN=11318;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/0:16:195:1.9:0,1.9,495.1:0:16:1.997:29.32\n13\t16011579\t655500:1\tC\tC[13:16017146[\t0\tPASS\tDISC_MAPQ=29;EVDNC=DSCRD;IMPRECISE;MAPQ=29;MATEID=655500:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16011579(+)-13:16017146(-)__13_15998501_16023501D;SPAN=5567;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/0:13:221:19:0,19,594.1:0:13:19.21:21.88\n13\t16012944\t655434:2\tC\t]13:16001617]C\t7\tPASS\tDISC_MAPQ=17;EVDNC=DSCRD;IMPRECISE;MAPQ=17;MATEID=655434:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16001617(+)-13:16012944(-)__13_15998501_16023501D;SPAN=11327;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:91:7.7:7.7,0,218.9:0:10:-7.431:19.65\n13\t16013417\t892860:1\tG\t[21:7969771[G\t20\tPASS\tDISC_MAPQ=18;EVDNC=DSCRD;IMPRECISE;MAPQ=18;MATEID=892860:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16013417(-)-21:7969771(-)__21_7962501_7987501D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:35:20:20,0,66.2:0:9:-19.87:21.36\n13\t16013930\t655511:1\tG\t]13:16019632]G\t51\tPASS\tDISC_MAPQ=24;EVDNC=DSCRD;IMPRECISE;MAPQ=24;MATEID=655511:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16013930(-)-13:16019632(+)__13_15998501_16023501D;SPAN=5702;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:19:41:51.2:51.2,0,51.2:0:19:-51.19:51.2\n13\t16014050\t655447:2\tT\tT[13:16002842[\t4\tPASS\tDISC_MAPQ=28;EVDNC=DSCRD;IMPRECISE;MAPQ=28;MATEID=655447:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16002842(-)-13:16014050(+)__13_15998501_16023501D;SPAN=11208;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:102:4.4:4.4,0,251.9:0:10:-4.339:19.13\n13\t16014991\t655523:1\tA\t]13:16020652]A\t55\tPASS\tDISC_MAPQ=28;EVDNC=DSCRD;IMPRECISE;MAPQ=28;MATEID=655523:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16014991(-)-13:16020652(+)__13_15998501_16023501D;SPAN=5661;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:24:85:55.4:55.4,0,157.7:0:24:-55.33:58.11\n13\t16016339\t655526:1\tG\t]13:16022071]G\t98\tPASS\tDISC_MAPQ=31;EVDNC=DSCRD;IMPRECISE;MAPQ=31;MATEID=655526:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16016339(-)-13:16022071(+)__13_15998501_16023501D;SPAN=5732;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:36:73:85.1:98.3,0,85.1:0:36:-98.36:98.36\n13\t16016355\t655489:2\tG\t]13:16010771]G\t1\tPASS\tDISC_MAPQ=38;EVDNC=DSCRD;IMPRECISE;MAPQ=38;MATEID=655489:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16010771(+)-13:16016355(-)__13_15998501_16023501D;SPAN=5584;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:102:1.1:1.1,0,255.2:0:9:-1.038:16.79\n13\t16016361\t655459:2\tT\t]13:16005128]T\t47\tPASS\tDISC_MAPQ=33;EVDNC=DSCRD;IMPRECISE;MAPQ=33;MATEID=655459:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16005128(+)-13:16016361(-)__13_15998501_16023501D;SPAN=11233;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:22:88:47.9:47.9,0,173.3:0:22:-47.89:51.9\n13\t16016553\t896677:1\tG\t]21:10789057]G\t82\tPASS\tDISC_MAPQ=255;EVDNC=ASDIS;HOMSEQ=GAAGCATTCTGAGAAACTTCTTT;MAPQ=60;MATEID=896677:2;MATENM=14;NM=0;NUMPARTS=2;SCTG=c_21_10780001_10805001_326C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:33:95:82.4:82.4,0,155:11:22:-82.23:83.51\n13\t16016588\t655540:1\tT\tT[13:16022261[\t36\tPASS\tDISC_MAPQ=29;EVDNC=DSCRD;IMPRECISE;MAPQ=29;MATEID=655540:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16016588(+)-13:16022261(-)__13_15998501_16023501D;SPAN=5673;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:21:116:36.8:36.8,0,254.6:0:21:-36.71:46.2\n13\t16017146\t655500:2\tC\t]13:16011579]C\t0\tPASS\tDISC_MAPQ=18;EVDNC=DSCRD;IMPRECISE;MAPQ=18;MATEID=655500:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16011579(+)-13:16017146(-)__13_15998501_16023501D;SPAN=5567;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/0:13:221:19:0,19,594.1:0:13:19.21:21.88\n13\t16018130\t655429:2\tG\tG[13:16001321[\t0\tPASS\tDISC_MAPQ=33;EVDNC=DSCRD;IMPRECISE;MAPQ=33;MATEID=655429:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16001321(-)-13:16018130(+)__13_15998501_16023501D;SPAN=16809;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/0:16:276:24.4:0,24.4,742.6:0:16:24.77:26.82\n13\t16019632\t655511:2\tA\tA[13:16013930[\t51\tPASS\tDISC_MAPQ=26;EVDNC=DSCRD;IMPRECISE;MAPQ=26;MATEID=655511:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16013930(-)-13:16019632(+)__13_15998501_16023501D;SPAN=5702;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:19:41:51.2:51.2,0,51.2:0:19:-51.19:51.2\n13\t16020430\t655481:2\tG\t]13:16009131]G\t41\tPASS\tDISC_MAPQ=21;EVDNC=DSCRD;IMPRECISE;MAPQ=21;MATEID=655481:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16009131(+)-13:16020430(-)__13_15998501_16023501D;SPAN=11299;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:16:42:41:41,0,64.1:0:16:-41.01:41.3\n13\t16020652\t655523:2\tG\tG[13:16014991[\t55\tPASS\tDISC_MAPQ=20;EVDNC=DSCRD;IMPRECISE;MAPQ=20;MATEID=655523:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16014991(-)-13:16020652(+)__13_15998501_16023501D;SPAN=5661;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:24:85:55.4:55.4,0,157.7:0:24:-55.33:58.11\n13\t16022071\t655526:2\tG\tG[13:16016339[\t98\tPASS\tDISC_MAPQ=19;EVDNC=DSCRD;IMPRECISE;MAPQ=19;MATEID=655526:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16016339(-)-13:16022071(+)__13_15998501_16023501D;SPAN=5732;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:36:73:85.1:98.3,0,85.1:0:36:-98.36:98.36\n13\t16022261\t655540:2\tA\t]13:16016588]A\t36\tPASS\tDISC_MAPQ=34;EVDNC=DSCRD;IMPRECISE;MAPQ=34;MATEID=655540:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16016588(+)-13:16022261(-)__13_15998501_16023501D;SPAN=5673;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:21:116:36.8:36.8,0,254.6:0:21:-36.71:46.2\n13\t16022545\t655498:2\tN\tN[13:16011227[\t0\tPASS\tDISC_MAPQ=56;EVDNC=DSCRD;IMPRECISE;MAPQ=56;MATEID=655498:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16011227(-)-13:16022545(+)__13_15998501_16023501D;SPAN=11318;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/0:16:195:1.9:0,1.9,495.1:0:16:1.997:29.32\n13\t16031321\t655617:1\tA\t]13:16057058]A\t39\tPASS\tDISC_MAPQ=21;EVDNC=DSCRD;IMPRECISE;MAPQ=21;MATEID=655617:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16031321(-)-13:16057058(+)__13_16047501_16072501D;SPAN=25737;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:13:10:3.6:39.6,3.6,0:0:13:-39.61:39.61\n13\t16057058\t655617:2\tT\tT[13:16031321[\t39\tPASS\tDISC_MAPQ=58;EVDNC=DSCRD;IMPRECISE;MAPQ=58;MATEID=655617:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16031321(-)-13:16057058(+)__13_16047501_16072501D;SPAN=25737;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:13:10:3.6:39.6,3.6,0:0:13:-39.61:39.61\n13\t16125492\t656014:1\tC\t]13:16163215]C\t43\tPASS\tDISC_MAPQ=24;EVDNC=DSCRD;IMPRECISE;MAPQ=24;MATEID=656014:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16125492(-)-13:16163215(+)__13_16145501_16170501D;SPAN=37723;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:16:34:40.1:43.4,0,40.1:0:16:-43.26:43.26\n13\t16127862\t655887:1\tA\t]13:16145009]A\t0\tPASS\tDISC_MAPQ=19;EVDNC=DSCRD;IMPRECISE;MAPQ=19;MATEID=655887:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16127862(-)-13:16145009(+)__13_16121001_16146001D;SPAN=17147;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/0:9:317:59.3:0,59.3,917.6:0:9:59.4:12.27\n13\t16145009\t655887:2\tT\tT[13:16127862[\t0\tPASS\tDISC_MAPQ=34;EVDNC=DSCRD;IMPRECISE;MAPQ=34;MATEID=655887:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16127862(-)-13:16145009(+)__13_16121001_16146001D;SPAN=17147;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/0:9:317:59.3:0,59.3,917.6:0:9:59.4:12.27\n13\t16163215\t656014:2\tT\tT[13:16125492[\t43\tPASS\tDISC_MAPQ=32;EVDNC=DSCRD;IMPRECISE;MAPQ=32;MATEID=656014:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16125492(-)-13:16163215(+)__13_16145501_16170501D;SPAN=37723;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:16:34:40.1:43.4,0,40.1:0:16:-43.26:43.26\n13\t16166518\t656143:1\tC\t]13:16177110]C\t26\tPASS\tDISC_MAPQ=19;EVDNC=DSCRD;IMPRECISE;MAPQ=19;MATEID=656143:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16166518(-)-13:16177110(+)__13_16145501_16170501D;SPAN=10592;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:9:4:2.4:26.4,2.4,0:0:9:-26.41:26.41\n13\t16176791\t656569:1\tC\t]13:16177450]C\t18\tPASS\tDISC_MAPQ=26;EVDNC=DSCRD;IMPRECISE;MAPQ=26;MATEID=656569:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16176791(-)-13:16177450(+)__13_16170001_16195001D;SPAN=659;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:40:18.5:18.5,0,81.2:0:9:-18.47:20.76\n13\t16177110\t656143:2\tG\tG[13:16166518[\t26\tPASS\tDISC_MAPQ=25;EVDNC=DSCRD;IMPRECISE;MAPQ=25;MATEID=656143:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16166518(-)-13:16177110(+)__13_16145501_16170501D;SPAN=10592;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:9:4:2.4:26.4,2.4,0:0:9:-26.41:26.41\n13\t16177450\t656569:2\tG\tG[13:16176791[\t18\tPASS\tDISC_MAPQ=31;EVDNC=DSCRD;IMPRECISE;MAPQ=31;MATEID=656569:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16176791(-)-13:16177450(+)__13_16170001_16195001D;SPAN=659;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:40:18.5:18.5,0,81.2:0:9:-18.47:20.76\n13\t16182447\t656725:1\tA\t]13:16182808]A\t65\tPASS\tDISC_MAPQ=3;EVDNC=ASDIS;HOMSEQ=ATAAAAACTAGACAGAAGA;MAPQ=14;MATEID=656725:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_13_16170001_16195001_257C;SPAN=361;SUBN=3;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:25:61:65.6:65.6,0,85.4:23:3:-65.38:65.57\n13\t16182808\t656725:2\tA\tA[13:16182447[\t65\tPASS\tDISC_MAPQ=4;EVDNC=ASDIS;HOMSEQ=ATAAAAACTAGACAGAAGA;MAPQ=60;MATEID=656725:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_13_16170001_16195001_257C;SPAN=361;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:25:61:65.6:65.6,0,85.4:23:3:-65.38:65.57\n13\t16256480\t658420:1\tG\t]13:16259419]G\t72\tPASS\tDISC_MAPQ=27;EVDNC=DSCRD;IMPRECISE;MAPQ=27;MATEID=658420:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16256480(-)-13:16259419(+)__13_16243501_16268501D;SPAN=2939;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:24:20:6.6:72.6,6.6,0:0:24:-72.62:72.62\n13\t16259044\t658453:1\tA\t[20:28781252[A\t92\tPASS\tDISC_MAPQ=4;EVDNC=ASDIS;HOMSEQ=TCAGAATGCTTCTGTGTAGTTTTTTTGTGAAGATATTT;MAPQ=38;MATEID=658453:2;MATENM=1;NM=7;NUMPARTS=2;SCTG=c_13_16243501_16268501_360C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:30:10:8.4:92.4,8.4,0:21:9:-92.42:92.42\n13\t16259419\t658420:2\tN\tN[13:16256480[\t72\tPASS\tDISC_MAPQ=30;EVDNC=DSCRD;IMPRECISE;MAPQ=30;MATEID=658420:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16256480(-)-13:16259419(+)__13_16243501_16268501D;SPAN=2939;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:24:20:6.6:72.6,6.6,0:0:24:-72.62:72.62\n13\t16271398\t658578:1\tA\tA[13:16274326[\t2\tPASS\tDISC_MAPQ=40;EVDNC=DSCRD;IMPRECISE;MAPQ=40;MATEID=658578:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16271398(+)-13:16274326(-)__13_16268001_16293001D;SPAN=2928;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:87:2:2,0,216.5:0:8:-1.953:15.07\n13\t16271442\t658579:1\tA\tA[13:16277305[\t69\tPASS\tDISC_MAPQ=36;EVDNC=DSCRD;IMPRECISE;MAPQ=36;MATEID=658579:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16271442(+)-13:16277305(-)__13_16268001_16293001D;SPAN=5863;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:21:23:6.3:69.3,6.3,0:0:21:-68.32:68.32\n13\t16271831\t658587:1\tC\tC[13:16274694[\t17\tPASS\tDISC_MAPQ=19;EVDNC=DSCRD;IMPRECISE;MAPQ=19;MATEID=658587:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16271831(+)-13:16274694(-)__13_16268001_16293001D;SPAN=2863;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:44:17.3:17.3,0,93.2:0:9:-17.34:20.33\n13\t16274326\t658578:2\tA\t]13:16271398]A\t2\tPASS\tDISC_MAPQ=19;EVDNC=DSCRD;IMPRECISE;MAPQ=19;MATEID=658578:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16271398(+)-13:16274326(-)__13_16268001_16293001D;SPAN=2928;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:87:2:2,0,216.5:0:8:-1.953:15.07\n13\t16274694\t658587:2\tG\t]13:16271831]G\t17\tPASS\tDISC_MAPQ=23;EVDNC=DSCRD;IMPRECISE;MAPQ=23;MATEID=658587:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16271831(+)-13:16274694(-)__13_16268001_16293001D;SPAN=2863;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:44:17.3:17.3,0,93.2:0:9:-17.34:20.33\n13\t16277305\t658579:2\tT\t]13:16271442]T\t69\tPASS\tDISC_MAPQ=32;EVDNC=DSCRD;IMPRECISE;MAPQ=32;MATEID=658579:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16271442(+)-13:16277305(-)__13_16268001_16293001D;SPAN=5863;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:21:23:6.3:69.3,6.3,0:0:21:-68.32:68.32\n13\t16279161\t658601:1\tC\t]13:16280739]C\t42\tPASS\tDISC_MAPQ=47;EVDNC=DSCRD;IMPRECISE;MAPQ=47;MATEID=658601:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16279161(-)-13:16280739(+)__13_16268001_16293001D;SPAN=1578;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:14:10:3.9:42.9,3.9,0:0:14:-42.91:42.91\n13\t16280739\t658601:2\tG\tG[13:16279161[\t42\tPASS\tDISC_MAPQ=30;EVDNC=DSCRD;IMPRECISE;MAPQ=30;MATEID=658601:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16279161(-)-13:16280739(+)__13_16268001_16293001D;SPAN=1578;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:14:10:3.9:42.9,3.9,0:0:14:-42.91:42.91\n13\t16293214\t658722:1\tT\t]13:16345186]T\t46\tPASS\tDISC_MAPQ=16;EVDNC=DSCRD;IMPRECISE;MAPQ=16;MATEID=658722:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16293214(-)-13:16345186(+)__13_16341501_16366501D;SPAN=51972;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:15:10:4.2:46.2,4.2,0:0:15:-46.21:46.21\n13\t16293475\t659043:1\tT\tT[13:16624297[\t23\tPASS\tDISC_MAPQ=23;EVDNC=DSCRD;IMPRECISE;MAPQ=23;MATEID=659043:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16293475(+)-13:16624297(-)__13_16611001_16636001D;SPAN=330822;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:21:23.9:23.9,0,27.2:0:9:-23.81:23.84\n13\t16298838\t658649:1\tT\tT[13:16678833[\t33\tPASS\tDISC_MAPQ=30;EVDNC=DSCRD;IMPRECISE;MAPQ=30;MATEID=658649:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16298838(+)-13:16678833(-)__13_16292501_16317501D;SPAN=379995;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:22:20.3:33.5,0,20.3:0:12:-33.55:33.55\n13\t16326610\t659640:1\tG\t]13:17149141]G\t58\tPASS\tDISC_MAPQ=37;EVDNC=DSCRD;IMPRECISE;MAPQ=37;MATEID=659640:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16326610(-)-13:17149141(+)__13_17125501_17150501D;SPAN=822531;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:21:39:38.6:58.4,0,38.6:0:21:-58.54:58.54\n13\t16326671\t659080:1\tA\t]13:16653519]A\t18\tPASS\tDISC_MAPQ=43;EVDNC=DSCRD;IMPRECISE;MAPQ=43;MATEID=659080:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16326671(-)-13:16653519(+)__13_16635501_16660501D;SPAN=326848;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:29:18.2:18.2,0,54.5:0:8:-18.26:19.27\n13\t16326907\t658726:1\tT\tT[13:16358236[\t52\tPASS\tDISC_MAPQ=48;EVDNC=DSCRD;IMPRECISE;MAPQ=48;MATEID=658726:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16326907(+)-13:16358236(-)__13_16341501_16366501D;SPAN=31329;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:18:24:6.5:52.7,0,6.5:0:18:-54.59:54.59\n13\t16344756\t658734:1\tA\t]13:16358491]A\t89\tPASS\tDISC_MAPQ=28;EVDNC=DSCRD;IMPRECISE;MAPQ=28;MATEID=658734:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16344756(-)-13:16358491(+)__13_16341501_16366501D;SPAN=13735;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:29:21:8.1:89.1,8.1,0:0:29:-89.12:89.12\n13\t16345186\t658722:2\tC\tC[13:16293214[\t46\tPASS\tDISC_MAPQ=27;EVDNC=DSCRD;IMPRECISE;MAPQ=27;MATEID=658722:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16293214(-)-13:16345186(+)__13_16341501_16366501D;SPAN=51972;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:15:10:4.2:46.2,4.2,0:0:15:-46.21:46.21\n13\t16345189\t659048:1\tT\tT[13:16624249[\t75\tPASS\tDISC_MAPQ=15;EVDNC=DSCRD;IMPRECISE;MAPQ=15;MATEID=659048:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16345189(+)-13:16624249(-)__13_16611001_16636001D;SPAN=279060;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:25:7:6.9:75.9,6.9,0:0:25:-75.92:75.92\n13\t16358236\t658726:2\tA\t]13:16326907]A\t52\tPASS\tDISC_MAPQ=54;EVDNC=DSCRD;IMPRECISE;MAPQ=54;MATEID=658726:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16326907(+)-13:16358236(-)__13_16341501_16366501D;SPAN=31329;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:18:24:6.5:52.7,0,6.5:0:18:-54.59:54.59\n13\t16358491\t658734:2\tT\tT[13:16344756[\t89\tPASS\tDISC_MAPQ=55;EVDNC=DSCRD;IMPRECISE;MAPQ=55;MATEID=658734:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16344756(-)-13:16358491(+)__13_16341501_16366501D;SPAN=13735;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:29:21:8.1:89.1,8.1,0:0:29:-89.12:89.12\n13\t16385294\t659116:1\tG\t]13:16679290]G\t26\tPASS\tDISC_MAPQ=29;EVDNC=DSCRD;IMPRECISE;MAPQ=29;MATEID=659116:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16385294(-)-13:16679290(+)__13_16660001_16685001D;SPAN=293996;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:9:1:2.4:26.4,2.4,0:0:9:-26.41:26.41\n13\t16426078\t659443:1\tG\tG[13:16940860[\t0\tPASS\tDISC_MAPQ=21;EVDNC=DSCRD;IMPRECISE;MAPQ=21;MATEID=659443:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16426078(+)-13:16940860(-)__13_16929501_16954501D;SPAN=514782;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/0:8:95:0:0,0,237.6:0:8:0.2957:14.75\n13\t16427155\t659118:1\tG\tG[13:16678845[\t25\tPASS\tDISC_MAPQ=38;EVDNC=DSCRD;IMPRECISE;MAPQ=38;MATEID=659118:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16427155(+)-13:16678845(-)__13_16660001_16685001D;SPAN=251690;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:14:9.2:25.7,0,9.2:0:9:-26.19:26.19\n13\t16507002\t658964:1\tT\tT[13:17299846[\t29\tPASS\tDISC_MAPQ=28;EVDNC=DSCRD;IMPRECISE;MAPQ=28;MATEID=658964:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16507002(+)-13:17299846(-)__13_16488501_16513501D;SPAN=792844;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:47:29.9:29.9,0,86:0:13:-29.7:31.34\n13\t16526723\t658974:1\tA\t]13:17086687]A\t99\tPASS\tDISC_MAPQ=44;EVDNC=ASDIS;HOMSEQ=AAAAGCAAATATCTTCCCATAAACACTAGACAGAAACATTCTCAGAAACTTCTTTATGA;MAPQ=60;MATEID=658974:2;MATENM=0;NM=4;NUMPARTS=2;SCTG=c_13_16513001_16538001_654C;SPAN=559964;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:53:29:14.7:161.7,14.7,0:32:23:-161.7:161.7\n13\t16526965\t658976:1\tA\tA[13:17146679[\t44\tPASS\tDISC_MAPQ=55;EVDNC=DSCRD;IMPRECISE;MAPQ=55;MATEID=658976:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16526965(+)-13:17146679(-)__13_16513001_16538001D;SPAN=619714;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:17:43:44:44,0,63.8:0:17:-44.03:44.24\n13\t16526973\t658977:1\tA\tA[13:16603430[\t14\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=658977:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16526973(+)-13:16603430(-)__13_16513001_16538001D;SPAN=76457;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:41:14.9:14.9,0,87.5:0:8:-14.88:17.89\n13\t16527034\t658978:1\tG\tG[13:16906930[\t46\tPASS\tDISC_MAPQ=33;EVDNC=DSCRD;IMPRECISE;MAPQ=33;MATEID=658978:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16527034(+)-13:16906930(-)__13_16513001_16538001D;SPAN=379896;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:16:14:4.2:46.2,4.2,0:0:16:-46.21:46.21\n13\t16551507\t658998:1\tC\tC[13:16871236[\t82\tPASS\tDISC_MAPQ=8;EVDNC=ASDIS;HOMSEQ=TTGGAAACGGGAATATCTTCATATCAAATCTAGACAGAAGCATTCTCAGAAAC;MAPQ=14;MATEID=658998:2;MATENM=0;NM=3;NUMPARTS=2;SCTG=c_13_16537501_16562501_35C;SPAN=319729;SUBN=2;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:27:12:7.5:82.5,7.5,0:26:2:-82.52:82.52\n13\t16603430\t658977:2\tA\t]13:16526973]A\t14\tPASS\tDISC_MAPQ=17;EVDNC=DSCRD;IMPRECISE;MAPQ=17;MATEID=658977:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16526973(+)-13:16603430(-)__13_16513001_16538001D;SPAN=76457;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:41:14.9:14.9,0,87.5:0:8:-14.88:17.89\n13\t16618050\t659056:1\tA\tA[13:16631536[\t6\tPASS\tDISC_MAPQ=17;EVDNC=DSCRD;IMPRECISE;MAPQ=17;MATEID=659056:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16618050(+)-13:16631536(-)__13_16611001_16636001D;SPAN=13486;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:83:6.5:6.5,0,201.2:0:9:-6.378:17.63\n13\t16624236\t659222:1\tT\t]13:16726447]T\t47\tPASS\tDISC_MAPQ=46;EVDNC=DSCRD;IMPRECISE;MAPQ=46;MATEID=659222:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16624236(-)-13:16726447(+)__13_16709001_16734001D;SPAN=102211;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:16:21:4.1:47,0,4.1:0:16:-48.75:48.75\n13\t16624249\t659048:2\tT\t]13:16345189]T\t75\tPASS\tDISC_MAPQ=43;EVDNC=DSCRD;IMPRECISE;MAPQ=43;MATEID=659048:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16345189(+)-13:16624249(-)__13_16611001_16636001D;SPAN=279060;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:25:7:6.9:75.9,6.9,0:0:25:-75.92:75.92\n13\t16624297\t659043:2\tT\t]13:16293475]T\t23\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=659043:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16293475(+)-13:16624297(-)__13_16611001_16636001D;SPAN=330822;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:21:23.9:23.9,0,27.2:0:9:-23.81:23.84\n13\t16624499\t659339:1\tT\tT[13:16857426[\t0\tPASS\tDISC_MAPQ=16;EVDNC=DSCRD;IMPRECISE;MAPQ=16;MATEID=659339:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16624499(+)-13:16857426(-)__13_16856001_16881001D;SPAN=232927;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/0:8:104:2.7:0,2.7,267.3:0:8:2.826:14.43\n13\t16624711\t659065:1\tC\tC[13:17396031[\t28\tPASS\tDISC_MAPQ=20;EVDNC=DSCRD;IMPRECISE;MAPQ=20;MATEID=659065:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16624711(+)-13:17396031(-)__13_16611001_16636001D;SPAN=771320;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:18:14.9:28.1,0,14.9:0:10:-28.08:28.08\n13\t16631536\t659056:2\tC\t]13:16618050]C\t6\tPASS\tDISC_MAPQ=17;EVDNC=DSCRD;IMPRECISE;MAPQ=17;MATEID=659056:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16618050(+)-13:16631536(-)__13_16611001_16636001D;SPAN=13486;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:83:6.5:6.5,0,201.2:0:9:-6.378:17.63\n13\t16653519\t659080:2\tA\tA[13:16326671[\t18\tPASS\tDISC_MAPQ=51;EVDNC=DSCRD;IMPRECISE;MAPQ=51;MATEID=659080:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16326671(-)-13:16653519(+)__13_16635501_16660501D;SPAN=326848;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:29:18.2:18.2,0,54.5:0:8:-18.26:19.27\n13\t16656410\t659717:1\tA\tA[13:17209367[\t18\tPASS\tDISC_MAPQ=19;EVDNC=DSCRD;IMPRECISE;MAPQ=19;MATEID=659717:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16656410(+)-13:17209367(-)__13_17199001_17224001D;SPAN=552957;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:63:18.8:18.8,0,137.6:0:11:-18.6:24.01\n13\t16665301\t659226:1\tT\tT[13:16710945[\t56\tPASS\tDISC_MAPQ=34;EVDNC=ASDIS;HOMSEQ=AGCATCCTCAGAAACTTCTTTGTGATGTGTGCATTCAAGTCACAGAGTTGAACATT;MAPQ=60;MATEID=659226:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_13_16709001_16734001_661C;SPAN=45644;SUBN=4;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:19:8:5.1:56.1,5.1,0:16:8:-56.11:56.11\n13\t16678833\t658649:2\tT\t]13:16298838]T\t33\tPASS\tDISC_MAPQ=17;EVDNC=DSCRD;IMPRECISE;MAPQ=17;MATEID=658649:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16298838(+)-13:16678833(-)__13_16292501_16317501D;SPAN=379995;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:22:20.3:33.5,0,20.3:0:12:-33.55:33.55\n13\t16678845\t659118:2\tT\t]13:16427155]T\t25\tPASS\tDISC_MAPQ=26;EVDNC=DSCRD;IMPRECISE;MAPQ=26;MATEID=659118:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16427155(+)-13:16678845(-)__13_16660001_16685001D;SPAN=251690;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:14:9.2:25.7,0,9.2:0:9:-26.19:26.19\n13\t16679290\t659116:2\tG\tG[13:16385294[\t26\tPASS\tDISC_MAPQ=52;EVDNC=DSCRD;IMPRECISE;MAPQ=52;MATEID=659116:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16385294(-)-13:16679290(+)__13_16660001_16685001D;SPAN=293996;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:9:1:2.4:26.4,2.4,0:0:9:-26.41:26.41\n13\t16697718\t659900:1\tA\tA[13:17361102[\t89\tPASS\tDISC_MAPQ=56;EVDNC=DSCRD;IMPRECISE;MAPQ=56;MATEID=659900:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16697718(+)-13:17361102(-)__13_17346001_17371001D;SPAN=663384;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:29:5:8.1:89.1,8.1,0:0:29:-89.12:89.12\n13\t16697740\t659651:1\tA\tA[13:17148635[\t16\tPASS\tDISC_MAPQ=38;EVDNC=DSCRD;IMPRECISE;MAPQ=38;MATEID=659651:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16697740(+)-13:17148635(-)__13_17125501_17150501D;SPAN=450895;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:35:16.7:16.7,0,69.5:0:8:-16.57:18.51\n13\t16710945\t659226:2\tA\t]13:16665301]A\t56\tPASS\tDISC_MAPQ=46;EVDNC=ASDIS;HOMSEQ=AGCATCCTCAGAAACTTCTTTGTGATGTGTGCATTCAAGTCACAGAGTTGAACATT;MAPQ=60;MATEID=659226:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_13_16709001_16734001_661C;SPAN=45644;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:19:8:5.1:56.1,5.1,0:16:8:-56.11:56.11\n13\t16726447\t659222:2\tT\tT[13:16624236[\t47\tPASS\tDISC_MAPQ=16;EVDNC=DSCRD;IMPRECISE;MAPQ=16;MATEID=659222:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16624236(-)-13:16726447(+)__13_16709001_16734001D;SPAN=102211;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:16:21:4.1:47,0,4.1:0:16:-48.75:48.75\n13\t16825242\t659506:1\tA\tA[13:17018409[\t31\tPASS\tDISC_MAPQ=25;EVDNC=DSCRD;IMPRECISE;MAPQ=25;MATEID=659506:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16825242(+)-13:17018409(-)__13_17003001_17028001D;SPAN=193167;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:28:31.7:31.7,0,38.3:0:12:-31.74:31.78\n13\t16844805\t659821:1\tA\t]13:17287651]A\t46\tPASS\tDISC_MAPQ=28;EVDNC=DSCRD;IMPRECISE;MAPQ=28;MATEID=659821:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16844805(-)-13:17287651(+)__13_17272501_17297501D;SPAN=442846;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:15:6:4.2:46.2,4.2,0:0:15:-46.21:46.21\n13\t16845061\t659349:1\tA\tA[13:16857396[\t28\tPASS\tDISC_MAPQ=25;EVDNC=DSCRD;IMPRECISE;MAPQ=25;MATEID=659349:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16845061(+)-13:16857396(-)__13_16856001_16881001D;SPAN=12335;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:17:100:28.1:28.1,0,222.8:0:17:-28.01:36.89\n13\t16857396\t659349:2\tA\t]13:16845061]A\t28\tPASS\tDISC_MAPQ=42;EVDNC=DSCRD;IMPRECISE;MAPQ=42;MATEID=659349:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16845061(+)-13:16857396(-)__13_16856001_16881001D;SPAN=12335;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:17:100:28.1:28.1,0,222.8:0:17:-28.01:36.89\n13\t16857426\t659339:2\tA\t]13:16624499]A\t0\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=659339:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16624499(+)-13:16857426(-)__13_16856001_16881001D;SPAN=232927;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/0:8:104:2.7:0,2.7,267.3:0:8:2.826:14.43\n13\t16871236\t658998:2\tT\t]13:16551507]T\t82\tPASS\tDISC_MAPQ=40;EVDNC=ASDIS;HOMSEQ=TTGGAAACGGGAATATCTTCATATCAAATCTAGACAGAAGCATTCTCAGAAAC;MAPQ=48;MATEID=658998:1;MATENM=3;NM=0;NUMPARTS=2;SCTG=c_13_16537501_16562501_35C;SPAN=319729;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:27:12:7.5:82.5,7.5,0:26:2:-82.52:82.52\n13\t16871482\t659378:1\tG\tG[13:16894583[\t56\tPASS\tDISC_MAPQ=22;EVDNC=DSCRD;IMPRECISE;MAPQ=22;MATEID=659378:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16871482(+)-13:16894583(-)__13_16880501_16905501D;SPAN=23101;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:19:6:5.1:56.1,5.1,0:0:19:-56.11:56.11\n13\t16894583\t659378:2\tC\t]13:16871482]C\t56\tPASS\tDISC_MAPQ=30;EVDNC=DSCRD;IMPRECISE;MAPQ=30;MATEID=659378:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16871482(+)-13:16894583(-)__13_16880501_16905501D;SPAN=23101;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:19:6:5.1:56.1,5.1,0:0:19:-56.11:56.11\n13\t16906905\t659652:1\tT\t]13:17146944]T\t66\tPASS\tDISC_MAPQ=28;EVDNC=DSCRD;IMPRECISE;MAPQ=28;MATEID=659652:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16906905(-)-13:17146944(+)__13_17125501_17150501D;SPAN=240039;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:22:1:6:66,6,0:0:22:-66.02:66.02\n13\t16906930\t658978:2\tG\t]13:16527034]G\t46\tPASS\tDISC_MAPQ=31;EVDNC=DSCRD;IMPRECISE;MAPQ=31;MATEID=658978:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16527034(+)-13:16906930(-)__13_16513001_16538001D;SPAN=379896;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:16:14:4.2:46.2,4.2,0:0:16:-46.21:46.21\n13\t16911984\t659530:1\tT\t]13:17039999]T\t71\tPASS\tDISC_MAPQ=39;EVDNC=DSCRD;IMPRECISE;MAPQ=39;MATEID=659530:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16911984(-)-13:17039999(+)__13_17027501_17052501D;SPAN=128015;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:26:51:55.1:71.6,0,55.1:0:26:-71.58:71.58\n13\t16940860\t659443:2\tA\t]13:16426078]A\t0\tPASS\tDISC_MAPQ=29;EVDNC=DSCRD;IMPRECISE;MAPQ=29;MATEID=659443:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16426078(+)-13:16940860(-)__13_16929501_16954501D;SPAN=514782;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/0:8:95:0:0,0,237.6:0:8:0.2957:14.75\n13\t17018409\t659506:2\tG\t]13:16825242]G\t31\tPASS\tDISC_MAPQ=33;EVDNC=DSCRD;IMPRECISE;MAPQ=33;MATEID=659506:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16825242(+)-13:17018409(-)__13_17003001_17028001D;SPAN=193167;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:28:31.7:31.7,0,38.3:0:12:-31.74:31.78\n13\t17039999\t659530:2\tT\tT[13:16911984[\t71\tPASS\tDISC_MAPQ=44;EVDNC=DSCRD;IMPRECISE;MAPQ=44;MATEID=659530:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16911984(-)-13:17039999(+)__13_17027501_17052501D;SPAN=128015;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:26:51:55.1:71.6,0,55.1:0:26:-71.58:71.58\n13\t17086687\t658974:2\tA\tA[13:16526723[\t99\tPASS\tDISC_MAPQ=46;EVDNC=ASDIS;HOMSEQ=AAAAGCAAATATCTTCCCATAAACACTAGACAGAAACATTCTCAGAAACTTCTTTATGA;MAPQ=60;MATEID=658974:1;MATENM=4;NM=0;NUMPARTS=2;SCTG=c_13_16513001_16538001_654C;SPAN=559964;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:53:29:14.7:161.7,14.7,0:32:23:-161.7:161.7\n13\t17146679\t658976:2\tC\t]13:16526965]C\t44\tPASS\tDISC_MAPQ=37;EVDNC=DSCRD;IMPRECISE;MAPQ=37;MATEID=658976:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16526965(+)-13:17146679(-)__13_16513001_16538001D;SPAN=619714;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:17:43:44:44,0,63.8:0:17:-44.03:44.24\n13\t17146944\t659652:2\tG\tG[13:16906905[\t66\tPASS\tDISC_MAPQ=27;EVDNC=DSCRD;IMPRECISE;MAPQ=27;MATEID=659652:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16906905(-)-13:17146944(+)__13_17125501_17150501D;SPAN=240039;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:22:1:6:66,6,0:0:22:-66.02:66.02\n13\t17148635\t659651:2\tG\t]13:16697740]G\t16\tPASS\tDISC_MAPQ=54;EVDNC=DSCRD;IMPRECISE;MAPQ=54;MATEID=659651:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16697740(+)-13:17148635(-)__13_17125501_17150501D;SPAN=450895;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:35:16.7:16.7,0,69.5:0:8:-16.57:18.51\n13\t17149141\t659640:2\tT\tT[13:16326610[\t58\tPASS\tDISC_MAPQ=49;EVDNC=DSCRD;IMPRECISE;MAPQ=49;MATEID=659640:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16326610(-)-13:17149141(+)__13_17125501_17150501D;SPAN=822531;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:21:39:38.6:58.4,0,38.6:0:21:-58.54:58.54\n13\t17209367\t659717:2\tT\t]13:16656410]T\t18\tPASS\tDISC_MAPQ=21;EVDNC=DSCRD;IMPRECISE;MAPQ=21;MATEID=659717:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16656410(+)-13:17209367(-)__13_17199001_17224001D;SPAN=552957;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:63:18.8:18.8,0,137.6:0:11:-18.6:24.01\n13\t17268150\t659806:1\tT\t]13:17268348]T\t99\tPASS\tEVDNC=ASSMB;INSERTION=AAAAATCTTCCCCTACAACG;MAPQ=60;MATEID=659806:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_13_17248001_17273001_239C;SPAN=198;SUBN=1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:45:89:99:123.5,0,100.4:45:0:-123.7:123.7\n13\t17268348\t659806:2\tT\tT[13:17268150[\t99\tPASS\tEVDNC=ASSMB;INSERTION=AAAAATCTTCCCCTACAACG;MAPQ=60;MATEID=659806:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_13_17248001_17273001_239C;SPAN=198;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:45:89:99:123.5,0,100.4:45:0:-123.7:123.7\n13\t17287315\t659890:1\tT\t]13:17328244]T\t29\tPASS\tDISC_MAPQ=23;EVDNC=DSCRD;IMPRECISE;MAPQ=23;MATEID=659890:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:17287315(-)-13:17328244(+)__13_17321501_17346501D;SPAN=40929;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:10:8:2.7:29.7,2.7,0:0:10:-29.71:29.71\n13\t17287651\t659821:2\tT\tT[13:16844805[\t46\tPASS\tDISC_MAPQ=22;EVDNC=DSCRD;IMPRECISE;MAPQ=22;MATEID=659821:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16844805(-)-13:17287651(+)__13_17272501_17297501D;SPAN=442846;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:15:6:4.2:46.2,4.2,0:0:15:-46.21:46.21\n13\t17299846\t658964:2\tA\t]13:16507002]A\t29\tPASS\tDISC_MAPQ=40;EVDNC=DSCRD;IMPRECISE;MAPQ=40;MATEID=658964:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16507002(+)-13:17299846(-)__13_16488501_16513501D;SPAN=792844;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:47:29.9:29.9,0,86:0:13:-29.7:31.34\n13\t17328012\t659892:1\tC\t]13:17396311]C\t38\tPASS\tDISC_MAPQ=29;EVDNC=DSCRD;IMPRECISE;MAPQ=29;MATEID=659892:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:17328012(-)-13:17396311(+)__13_17321501_17346501D;SPAN=68299;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:28:31.7:38.3,0,31.7:0:14:-38.37:38.37\n13\t17328244\t659890:2\tA\tA[13:17287315[\t29\tPASS\tDISC_MAPQ=15;EVDNC=DSCRD;IMPRECISE;MAPQ=15;MATEID=659890:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:17287315(-)-13:17328244(+)__13_17321501_17346501D;SPAN=40929;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:10:8:2.7:29.7,2.7,0:0:10:-29.71:29.71\n13\t17361102\t659900:2\tG\t]13:16697718]G\t89\tPASS\tDISC_MAPQ=40;EVDNC=DSCRD;IMPRECISE;MAPQ=40;MATEID=659900:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16697718(+)-13:17361102(-)__13_17346001_17371001D;SPAN=663384;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:29:5:8.1:89.1,8.1,0:0:29:-89.12:89.12\n13\t17396031\t659065:2\tT\t]13:16624711]T\t28\tPASS\tDISC_MAPQ=31;EVDNC=DSCRD;IMPRECISE;MAPQ=31;MATEID=659065:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16624711(+)-13:17396031(-)__13_16611001_16636001D;SPAN=771320;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:18:14.9:28.1,0,14.9:0:10:-28.08:28.08\n13\t17396311\t659892:2\tA\tA[13:17328012[\t38\tPASS\tDISC_MAPQ=25;EVDNC=DSCRD;IMPRECISE;MAPQ=25;MATEID=659892:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:17328012(-)-13:17396311(+)__13_17321501_17346501D;SPAN=68299;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:28:31.7:38.3,0,31.7:0:14:-38.37:38.37\n13\t17431936\t660321:1\tC\tC[13:18028973[\t18\tPASS\tDISC_MAPQ=18;EVDNC=DSCRD;IMPRECISE;MAPQ=18;MATEID=660321:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:17431936(+)-13:18028973(-)__13_18007501_18032501D;SPAN=597037;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:51:18.8:18.8,0,107.9:0:10:-18.67:22.39\n13\t17553570\t660051:1\tG\tG[13:17574225[\t29\tPASS\tDISC_MAPQ=22;EVDNC=DSCRD;IMPRECISE;MAPQ=22;MATEID=660051:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:17553570(+)-13:17574225(-)__13_17566501_17591501D;SPAN=20655;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:10:9:2.7:29.7,2.7,0:0:10:-29.71:29.71\n13\t17574225\t660051:2\tC\t]13:17553570]C\t29\tPASS\tDISC_MAPQ=16;EVDNC=DSCRD;IMPRECISE;MAPQ=16;MATEID=660051:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:17553570(+)-13:17574225(-)__13_17566501_17591501D;SPAN=20655;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:10:9:2.7:29.7,2.7,0:0:10:-29.71:29.71\n13\t17711258\t660261:1\tT\tT[13:17926844[\t39\tPASS\tDISC_MAPQ=39;EVDNC=DSCRD;IMPRECISE;MAPQ=39;MATEID=660261:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:17711258(+)-13:17926844(-)__13_17909501_17934501D;SPAN=215586;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:24:19.7:39.5,0,19.7:0:14:-39.77:39.77\n13\t17926844\t660261:2\tA\t]13:17711258]A\t39\tPASS\tDISC_MAPQ=37;EVDNC=DSCRD;IMPRECISE;MAPQ=37;MATEID=660261:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:17711258(+)-13:17926844(-)__13_17909501_17934501D;SPAN=215586;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:24:19.7:39.5,0,19.7:0:14:-39.77:39.77\n13\t18028973\t660321:2\tA\t]13:17431936]A\t18\tPASS\tDISC_MAPQ=22;EVDNC=DSCRD;IMPRECISE;MAPQ=22;MATEID=660321:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:17431936(+)-13:18028973(-)__13_18007501_18032501D;SPAN=597037;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:51:18.8:18.8,0,107.9:0:10:-18.67:22.39\n13\t18652931\t822300:1\tT\tT]18:14406760]\t20\tPASS\tDISC_MAPQ=45;EVDNC=DSCRD;IMPRECISE;MAPQ=45;MATEID=822300:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:18652931(+)-18:14406760(+)__18_14406001_14431001D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:21:20.6:20.6,0,30.5:0:8:-20.51:20.65\n13\t18902672\t660713:1\tT\tT[13:18902959[\t79\tPASS\tDISC_MAPQ=49;EVDNC=ASDIS;HOMSEQ=TACAGTCAACTCTTTT;MAPQ=55;MATEID=660713:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_13_18889501_18914501_14C;SPAN=287;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:26:9:7.2:79.2,7.2,0:23:5:-79.22:79.22\n13\t18902959\t660713:2\tT\t]13:18902672]T\t79\tPASS\tDISC_MAPQ=56;EVDNC=ASDIS;HOMSEQ=TACAGTCAACTCTTTT;MAPQ=60;MATEID=660713:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_13_18889501_18914501_14C;SPAN=287;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:26:9:7.2:79.2,7.2,0:23:5:-79.22:79.22\n13\t19203230\t661023:1\tC\t]13:19704496]C\t17\tPASS\tDISC_MAPQ=42;EVDNC=DSCRD;IMPRECISE;MAPQ=42;MATEID=661023:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:19203230(-)-13:19704496(+)__13_19698001_19723001D;SPAN=501266;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:32:17.6:17.6,0,60.5:0:8:-17.41:18.87\n13\t19344209\t660883:1\tA\tA]13:24542512]\t23\tPASS\tDISC_MAPQ=54;EVDNC=DSCRD;IMPRECISE;MAPQ=54;MATEID=660883:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:19344209(+)-13:24542512(+)__13_19330501_19355501D;SPAN=5198303;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:8:2:2.1:23.1,2.1,0:0:8:-23.11:23.11\n13\t19348511\t662933:1\tA\t[13:24537297[A\t23\tPASS\tDISC_MAPQ=52;EVDNC=DSCRD;IMPRECISE;MAPQ=52;MATEID=662933:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:19348511(-)-13:24537297(-)__13_24524501_24549501D;SPAN=5188786;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:22:23.6:23.6,0,30.2:0:9:-23.53:23.59\n13\t19387612\t662903:1\tG\t[13:24442077[G\t26\tPASS\tDISC_MAPQ=46;EVDNC=DSCRD;IMPRECISE;MAPQ=46;MATEID=662903:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:19387612(-)-13:24442077(-)__13_24426501_24451501D;SPAN=5054465;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:23:26.6:26.6,0,29.9:0:10:-26.55:26.57\n13\t19549586\t661710:1\tC\tC]13:21274569]\t26\tPASS\tDISC_MAPQ=43;EVDNC=DSCRD;IMPRECISE;MAPQ=43;MATEID=661710:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:19549586(+)-13:21274569(+)__13_21266001_21291001D;SPAN=1724983;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:24:26.3:26.3,0,32.9:0:10:-26.26:26.32\n13\t19558512\t660987:1\tT\t]13:19570101]T\t17\tPASS\tDISC_MAPQ=37;EVDNC=DSCRD;IMPRECISE;MAPQ=37;MATEID=660987:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:19558512(-)-13:19570101(+)__13_19551001_19576001D;SPAN=11589;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:30:17.9:17.9,0,57.5:0:8:-17.98:19.13\n13\t19570101\t660987:2\tT\tT[13:19558512[\t17\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=660987:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:19558512(-)-13:19570101(+)__13_19551001_19576001D;SPAN=11589;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:30:17.9:17.9,0,57.5:0:8:-17.98:19.13\n13\t19704496\t661023:2\tG\tG[13:19203230[\t17\tPASS\tDISC_MAPQ=57;EVDNC=DSCRD;IMPRECISE;MAPQ=57;MATEID=661023:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:19203230(-)-13:19704496(+)__13_19698001_19723001D;SPAN=501266;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:32:17.6:17.6,0,60.5:0:8:-17.41:18.87\n13\t19716043\t661448:1\tT\t]13:20738863]T\t38\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TT;MAPQ=60;MATEID=661448:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_13_20727001_20752001_21C;SPAN=1022820;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:18:5:38,0,5:9:11:-39.01:39.01\n13\t19768374\t661073:1\tG\t]13:19818698]G\t30\tPASS\tEVDNC=ASSMB;HOMSEQ=GT;MAPQ=60;MATEID=661073:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_13_19796001_19821001_35C;SPAN=50324;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:21:20.6:30.5,0,20.6:11:0:-30.47:30.47\n13\t19818698\t661073:2\tT\tT[13:19768374[\t30\tPASS\tEVDNC=ASSMB;HOMSEQ=GT;MAPQ=60;MATEID=661073:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_13_19796001_19821001_35C;SPAN=50324;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:21:20.6:30.5,0,20.6:11:0:-30.47:30.47\n13\t20738863\t661448:2\tT\tT[13:19716043[\t38\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TT;MAPQ=60;MATEID=661448:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_13_20727001_20752001_21C;SPAN=1022820;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:18:5:38,0,5:9:11:-39.01:39.01\n13\t21274569\t661710:2\tG\tG]13:19549586]\t26\tPASS\tDISC_MAPQ=58;EVDNC=DSCRD;IMPRECISE;MAPQ=58;MATEID=661710:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:19549586(+)-13:21274569(+)__13_21266001_21291001D;SPAN=1724983;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:24:26.3:26.3,0,32.9:0:10:-26.26:26.32\n13\t21325323\t661748:2\tT\tT]6:5853533]\t69\tPASS\tDISC_MAPQ=52;EVDNC=DSCRD;IMPRECISE;MAPQ=52;MATEID=661748:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:5853533(+)-13:21325323(+)__13_21315001_21340001D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:23:6:6.3:69.3,6.3,0:0:23:-69.32:69.32\n13\t21325351\t661746:2\tG\t[6:5852479[G\t26\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=661746:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:5852479(-)-13:21325351(-)__13_21315001_21340001D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:9:8:2.4:26.4,2.4,0:0:9:-26.41:26.41\n13\t22777302\t662416:1\tA\t]13:23163697]A\t39\tPASS\tEVDNC=ASSMB;HOMSEQ=AC;MAPQ=60;MATEID=662416:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_13_23152501_23177501_7C;SPAN=386395;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:25:22.7:39.2,0,22.7:14:0:-39.39:39.39\n13\t23163697\t662416:2\tC\tC[13:22777302[\t39\tPASS\tEVDNC=ASSMB;HOMSEQ=AC;MAPQ=60;MATEID=662416:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_13_23152501_23177501_7C;SPAN=386395;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:25:22.7:39.2,0,22.7:14:0:-39.39:39.39\n13\t23871309\t662730:1\tT\t]13:24067044]T\t27\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;INSERTION=C;MAPQ=60;MATEID=662730:2;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_13_24059001_24084001_3C;SPAN=195735;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:19:17.9:27.8,0,17.9:8:7:-27.73:27.73\n13\t24067044\t662730:2\tT\tT[13:23871309[\t27\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;INSERTION=C;MAPQ=60;MATEID=662730:1;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_13_24059001_24084001_3C;SPAN=195735;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:19:17.9:27.8,0,17.9:8:7:-27.73:27.73\n13\t24442077\t662903:2\tG\t[13:19387612[G\t26\tPASS\tDISC_MAPQ=57;EVDNC=DSCRD;IMPRECISE;MAPQ=57;MATEID=662903:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:19387612(-)-13:24442077(-)__13_24426501_24451501D;SPAN=5054465;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:23:26.6:26.6,0,29.9:0:10:-26.55:26.57\n13\t24537297\t662933:2\tT\t[13:19348511[T\t23\tPASS\tDISC_MAPQ=59;EVDNC=DSCRD;IMPRECISE;MAPQ=59;MATEID=662933:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:19348511(-)-13:24537297(-)__13_24524501_24549501D;SPAN=5188786;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:22:23.6:23.6,0,30.2:0:9:-23.53:23.59\n13\t24542512\t660883:2\tA\tA]13:19344209]\t23\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=660883:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:19344209(+)-13:24542512(+)__13_19330501_19355501D;SPAN=5198303;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:8:2:2.1:23.1,2.1,0:0:8:-23.11:23.11\n13\t26476016\t663577:1\tA\tA[13:26478049[\t89\tPASS\tDISC_MAPQ=57;EVDNC=DSCRD;IMPRECISE;MAPQ=57;MATEID=663577:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:26476016(+)-13:26478049(-)__13_26460001_26485001D;SPAN=2033;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:29:3:8.1:89.1,8.1,0:0:29:-89.12:89.12\n13\t26478049\t663577:2\tT\t]13:26476016]T\t89\tPASS\tDISC_MAPQ=46;EVDNC=DSCRD;IMPRECISE;MAPQ=46;MATEID=663577:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:26476016(+)-13:26478049(-)__13_26460001_26485001D;SPAN=2033;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:29:3:8.1:89.1,8.1,0:0:29:-89.12:89.12\n13\t26833724\t663675:1\tA\t]13:26839046]A\t26\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=663675:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_13_26827501_26852501_14C;SPAN=5322;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:36:26.3:26.3,0,62.6:11:0:-26.19:27.08\n13\t26839046\t663675:2\tA\tA[13:26833724[\t26\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=663675:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_13_26827501_26852501_14C;SPAN=5322;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:36:26.3:26.3,0,62.6:11:0:-26.19:27.08\n13\t26972727\t663697:1\tC\t]13:26973623]C\t31\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=663697:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:26972727(-)-13:26973623(+)__13_26950001_26975001D;SPAN=896;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:41:31.4:31.4,0,71:0:13:-31.39:32.26\n13\t26973623\t663697:2\tA\tA[13:26972727[\t31\tPASS\tDISC_MAPQ=47;EVDNC=DSCRD;IMPRECISE;MAPQ=47;MATEID=663697:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:26972727(-)-13:26973623(+)__13_26950001_26975001D;SPAN=896;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:41:31.4:31.4,0,71:0:13:-31.39:32.26\n13\t29641700\t664459:1\tT\tT[13:29647708[\t46\tPASS\tEVDNC=ASSMB;HOMSEQ=GAGAACTACTTTTT;MAPQ=60;MATEID=664459:2;MATENM=3;NM=2;NUMPARTS=2;SCTG=c_13_29645001_29670001_11C;SPAN=6008;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:16:5:4.2:46.2,4.2,0:16:0:-46.21:46.21\n13\t29647708\t664459:2\tG\t]13:29641700]G\t46\tPASS\tEVDNC=ASSMB;HOMSEQ=GAGAACTACTTTTT;MAPQ=60;MATEID=664459:1;MATENM=2;NM=3;NUMPARTS=2;SCTG=c_13_29645001_29670001_11C;SPAN=6008;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:16:5:4.2:46.2,4.2,0:16:0:-46.21:46.21\n13\t30844083\t664798:1\tT\tT[13:30844345[\t79\tPASS\tDISC_MAPQ=40;EVDNC=ASDIS;HOMSEQ=GTGTGTGT;MAPQ=60;MATEID=664798:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_13_30821001_30846001_30C;SPAN=262;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:26:17:7.2:79.2,7.2,0:17:9:-79.22:79.22\n13\t30844345\t664798:2\tG\t]13:30844083]G\t79\tPASS\tDISC_MAPQ=47;EVDNC=ASDIS;HOMSEQ=GTGTGTGT;MAPQ=60;MATEID=664798:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_13_30821001_30846001_30C;SPAN=262;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:26:17:7.2:79.2,7.2,0:17:9:-79.22:79.22\n13\t35861692\t665952:1\tC\t]13:35861791]C\t44\tPASS\tEVDNC=ASSMB;HOMSEQ=C;MAPQ=60;MATEID=665952:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_13_35843501_35868501_5C;SPAN=99;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:16:28:25.1:44.9,0,25.1:16:0:-45.23:45.23\n13\t35861791\t665952:2\tC\tC[13:35861692[\t44\tPASS\tEVDNC=ASSMB;HOMSEQ=C;MAPQ=60;MATEID=665952:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_13_35843501_35868501_5C;SPAN=99;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:16:28:25.1:44.9,0,25.1:16:0:-45.23:45.23\n13\t35957937\t665978:1\tT\t]13:35958395]T\t12\tPASS\tDISC_MAPQ=20;EVDNC=DSCRD;IMPRECISE;MAPQ=20;MATEID=665978:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:35957937(-)-13:35958395(+)__13_35941501_35966501D;SPAN=458;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:49:12.8:12.8,0,108.5:0:8:-12.63:17.2\n13\t35958132\t665982:1\tC\t]13:35958285]C\t77\tPASS\tEVDNC=ASSMB;HOMSEQ=C;INSERTION=GTAACCATCACCACCATCACC;MAPQ=60;MATEID=665982:2;MATENM=3;NM=2;NUMPARTS=3;SCTG=c_13_35941501_35966501_17C;SECONDARY;SPAN=153;SUBN=4;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:33:111:77.9:77.9,0,200:33:0:-77.73:80.78\n13\t35958285\t665982:2\tC\tC[13:35958132[\t77\tPASS\tEVDNC=ASSMB;HOMSEQ=C;INSERTION=GTAACCATCACCACCATCACC;MAPQ=60;MATEID=665982:1;MATENM=2;NM=3;NUMPARTS=3;SCTG=c_13_35941501_35966501_17C;SECONDARY;SPAN=153;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:33:111:77.9:77.9,0,200:33:0:-77.73:80.78\n13\t35958395\t665978:2\tA\tA[13:35957937[\t12\tPASS\tDISC_MAPQ=20;EVDNC=DSCRD;IMPRECISE;MAPQ=20;MATEID=665978:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:35957937(-)-13:35958395(+)__13_35941501_35966501D;SPAN=458;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:49:12.8:12.8,0,108.5:0:8:-12.63:17.2\n13\t38483182\t666631:1\tA\tA[13:38486065[\t99\tPASS\tEVDNC=ASSMB;HOMSEQ=GGAA;MAPQ=60;MATEID=666631:2;MATENM=9;NM=1;NUMPARTS=2;SCTG=c_13_38465001_38490001_10C;SPAN=2883;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:35:18:9.6:105.6,9.6,0:35:0:-105.6:105.6\n13\t38486065\t666631:2\tG\t]13:38483182]G\t99\tPASS\tEVDNC=ASSMB;HOMSEQ=GGAA;MAPQ=60;MATEID=666631:1;MATENM=1;NM=9;NUMPARTS=2;SCTG=c_13_38465001_38490001_10C;SPAN=2883;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:35:18:9.6:105.6,9.6,0:35:0:-105.6:105.6\n13\t40077132\t667033:1\tA\t]13:40077229]A\t72\tPASS\tEVDNC=ASSMB;INSERTION=AGGAAGGAAGGAGAGAAGGAAGGAAAGAGGGAAAGAAGGAAGGAAGGTAGGGAAGCGGGGGAGGAAGGAAGG;MAPQ=60;MATEID=667033:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_13_40057501_40082501_10C;SPAN=97;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:26:48:46.1:72.5,0,46.1:26:0:-72.58:72.58\n13\t40077229\t667033:2\tA\tA[13:40077132[\t72\tPASS\tEVDNC=ASSMB;INSERTION=AGGAAGGAAGGAGAGAAGGAAGGAAAGAGGGAAAGAAGGAAGGAAGGTAGGGAAGCGGGGGAGGAAGGAAGG;MAPQ=60;MATEID=667033:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_13_40057501_40082501_10C;SPAN=97;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:26:48:46.1:72.5,0,46.1:26:0:-72.58:72.58\n13\t42373133\t667582:1\tC\t]13:42373518]C\t75\tPASS\tEVDNC=ASSMB;HOMSEQ=CT;MAPQ=60;MATEID=667582:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_13_42360501_42385501_8C;SPAN=385;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:27:50:48.8:75.2,0,48.8:27:0:-75.32:75.32\n13\t42373518\t667582:2\tT\tT[13:42373133[\t75\tPASS\tEVDNC=ASSMB;HOMSEQ=CT;MAPQ=60;MATEID=667582:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_13_42360501_42385501_8C;SPAN=385;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:27:50:48.8:75.2,0,48.8:27:0:-75.32:75.32\n13\t42457888\t667624:1\tG\tG]13:42511705]\t23\tPASS\tDISC_MAPQ=53;EVDNC=DSCRD;IMPRECISE;MAPQ=53;MATEID=667624:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:42457888(+)-13:42511705(+)__13_42507501_42532501D;SPAN=53817;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:21:23.9:23.9,0,27.2:0:9:-23.81:23.84\n13\t42511705\t667624:2\tT\tT]13:42457888]\t23\tPASS\tDISC_MAPQ=57;EVDNC=DSCRD;IMPRECISE;MAPQ=57;MATEID=667624:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:42457888(+)-13:42511705(+)__13_42507501_42532501D;SPAN=53817;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:21:23.9:23.9,0,27.2:0:9:-23.81:23.84\n13\t42965789\t667750:1\tT\tT[13:42967310[\t99\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=667750:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:42965789(+)-13:42967310(-)__13_42948501_42973501D;SPAN=1521;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:44:12:12.3:135.3,12.3,0:0:44:-135.3:135.3\n13\t42967310\t667750:2\tA\t]13:42965789]A\t99\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=667750:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:42965789(+)-13:42967310(-)__13_42948501_42973501D;SPAN=1521;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:44:12:12.3:135.3,12.3,0:0:44:-135.3:135.3\n13\t46145627\t668526:1\tA\tA[13:46145943[\t82\tPASS\tEVDNC=ASSMB;HOMSEQ=AAAAGAGGGCA;MAPQ=60;MATEID=668526:2;MATENM=0;NM=8;NUMPARTS=2;SCTG=c_13_46133501_46158501_0C;SPAN=316;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:26:27:7.5:82.5,7.5,0:26:0:-82.52:82.52\n13\t46145943\t668526:2\tA\t]13:46145627]A\t82\tPASS\tEVDNC=ASSMB;HOMSEQ=AAAAGAGGGCA;MAPQ=60;MATEID=668526:1;MATENM=8;NM=0;NUMPARTS=2;SCTG=c_13_46133501_46158501_0C;SPAN=316;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:26:27:7.5:82.5,7.5,0:26:0:-82.52:82.52\n13\t46526845\t668674:1\tT\t[13:46527506[T\t33\tPASS\tDISC_MAPQ=57;EVDNC=ASDIS;HOMSEQ=T;MAPQ=60;MATEID=668674:2;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_13_46525501_46550501_14C;SPAN=661;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:15:58:33.2:33.2,0,112.4:11:12:-33.21:35.64\n13\t46527506\t668674:2\tA\t[13:46526845[A\t33\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=T;MAPQ=60;MATEID=668674:1;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_13_46525501_46550501_14C;SPAN=661;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:15:58:33.2:33.2,0,112.4:11:12:-33.21:35.64\n13\t47537863\t669085:1\tC\tC]13:47539357]\t30\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=669085:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:47537863(+)-13:47539357(+)__13_47530001_47555001D;SPAN=1494;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:34:30.2:30.2,0,53.3:0:12:-30.06:30.47\n13\t47539357\t669085:2\tT\tT]13:47537863]\t30\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=669085:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:47537863(+)-13:47539357(+)__13_47530001_47555001D;SPAN=1494;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:34:30.2:30.2,0,53.3:0:12:-30.06:30.47\n13\t48282773\t669322:2\tA\tA]12:33864471]\t23\tPASS\tDISC_MAPQ=54;EVDNC=DSCRD;IMPRECISE;MAPQ=54;MATEID=669322:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=12:33864471(+)-13:48282773(+)__13_48265001_48290001D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:11:3.5:23.3,0,3.5:0:8:-24.05:24.05\n13\t49318685\t669546:1\tA\t]19:32019277]A\t49\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;MAPQ=60;MATEID=669546:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_13_49294001_49319001_26C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:17:7:4.5:49.5,4.5,0:14:5:-49.51:49.51\n13\t50495150\t669774:1\tA\tA[13:50500942[\t26\tPASS\tDISC_MAPQ=53;EVDNC=DSCRD;IMPRECISE;MAPQ=53;MATEID=669774:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:50495150(+)-13:50500942(-)__13_50470001_50495001D;SPAN=5792;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:9:0:2.4:26.4,2.4,0:0:9:-26.41:26.41\n13\t50500942\t669774:2\tT\t]13:50495150]T\t26\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=669774:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:50495150(+)-13:50500942(-)__13_50470001_50495001D;SPAN=5792;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:9:0:2.4:26.4,2.4,0:0:9:-26.41:26.41\n13\t56018554\t13015:2\tA\tA[1:53954324[\t0\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=13015:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_53949001_53974001_79C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/0:7:108:6.9:0,6.9,283.8:7:0:7.251:12.08\n13\t57094112\t671048:1\tT\t]13:57101297]T\t39\tPASS\tDISC_MAPQ=54;EVDNC=ASDIS;HOMSEQ=TC;MAPQ=60;MATEID=671048:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_13_57085001_57110001_4C;SPAN=7185;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:25:22.7:39.2,0,22.7:10:8:-39.39:39.39\n13\t57101297\t671048:2\tC\tC[13:57094112[\t39\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TC;MAPQ=60;MATEID=671048:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_13_57085001_57110001_4C;SPAN=7185;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:25:22.7:39.2,0,22.7:10:8:-39.39:39.39\n13\t58512431\t671309:1\tA\tA[13:58514256[\t42\tPASS\tDISC_MAPQ=54;EVDNC=DSCRD;IMPRECISE;MAPQ=54;MATEID=671309:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:58512431(+)-13:58514256(-)__13_58506001_58531001D;SPAN=1825;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:14:11:3.9:42.9,3.9,0:0:14:-42.91:42.91\n13\t58514256\t671309:2\tA\t]13:58512431]A\t42\tPASS\tDISC_MAPQ=57;EVDNC=DSCRD;IMPRECISE;MAPQ=57;MATEID=671309:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:58512431(+)-13:58514256(-)__13_58506001_58531001D;SPAN=1825;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:14:11:3.9:42.9,3.9,0:0:14:-42.91:42.91\n13\t59899878\t671671:1\tA\tA[13:59906689[\t13\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=A;MAPQ=60;MATEID=671671:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_13_59902501_59927501_0C;SPAN=6811;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:5:3:1.2:13.2,1.2,0:3:4:-13.2:13.2\n13\t59906689\t671671:2\tA\t]13:59899878]A\t13\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=A;MAPQ=60;MATEID=671671:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_13_59902501_59927501_0C;SPAN=6811;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:5:3:1.2:13.2,1.2,0:3:4:-13.2:13.2\n13\t60886851\t671890:2\tA\tA[3:103962954[\t33\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;INSERTION=T;MAPQ=60;MATEID=671890:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_13_60882501_60907501_30C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:11:9:3:33,3,0:9:4:-33.01:33.01\n13\t60888202\t383809:2\tC\t]7:25047891]C\t99\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;INSERTION=TCTC;MAPQ=60;MATEID=383809:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_25039001_25064001_16C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:35:24:9.6:105.6,9.6,0:27:12:-105.6:105.6\n13\t61171765\t671986:2\tT\t]8:139084311]T\t29\tPASS\tEVDNC=ASSMB;INSERTION=G;MAPQ=60;MATEID=671986:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_13_61152001_61177001_19C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:14:5.9:29,0,5.9:10:0:-29.91:29.91\n13\t66665661\t680036:1\tA\t[13:92007460[A\t29\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=T;MAPQ=60;MATEID=680036:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_13_91997501_92022501_37C;SPAN=25341799;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:23:26.6:29.9,0,26.6:7:6:-29.85:29.85\n13\t66665768\t673423:1\tT\tT]13:92058480]\t22\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=673423:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:66665768(+)-13:92058480(+)__13_66664501_66689501D;SPAN=25392712;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:16:15.5:22.1,0,15.5:0:8:-21.93:21.93\n13\t71226063\t916288:1\tG\tG]22:28674185]\t25\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=916288:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:71226063(+)-22:28674185(+)__22_28665001_28690001D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:14:9.2:25.7,0,9.2:0:9:-26.19:26.19\n13\t73390558\t491100:2\tG\tG[9:36423668[\t56\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=G;MAPQ=60;MATEID=491100:1;MATENM=2;NM=1;NUMPARTS=2;SCTG=c_9_36407001_36432001_29C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:19:7:5.1:56.1,5.1,0:14:6:-56.11:56.11\n13\t74341145\t675549:1\tT\t]13:74342865]T\t99\tPASS\tDISC_MAPQ=54;EVDNC=ASDIS;HOMSEQ=TCTA;MAPQ=60;MATEID=675549:2;MATENM=0;NM=7;NUMPARTS=2;SCTG=c_13_74333001_74358001_1C;SPAN=1720;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:40:41:11.4:125.4,11.4,0:30:18:-125.4:125.4\n13\t74342865\t675549:2\tA\tA[13:74341145[\t99\tPASS\tDISC_MAPQ=58;EVDNC=ASDIS;HOMSEQ=TCTA;MAPQ=60;MATEID=675549:1;MATENM=7;NM=0;NUMPARTS=2;SCTG=c_13_74333001_74358001_1C;SPAN=1720;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:40:41:11.4:125.4,11.4,0:30:18:-125.4:125.4\n13\t78423489\t676627:1\tC\tC[13:78424585[\t26\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AACATGGTGAAACCC;MAPQ=60;MATEID=676627:2;MATENM=0;NM=0;NUMPARTS=2;REPSEQ=CCC;SCTG=c_13_78424501_78449501_6C;SECONDARY;SPAN=1096;SUBN=7;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:9:1:2.4:26.4,2.4,0:4:5:-26.41:26.41\n13\t78424585\t676627:2\tA\t]13:78423489]A\t26\tPASS\tDISC_MAPQ=59;EVDNC=ASDIS;HOMSEQ=AACATGGTGAAACCC;MAPQ=0;MATEID=676627:1;MATENM=0;NM=0;NUMPARTS=2;REPSEQ=CCC;SCTG=c_13_78424501_78449501_6C;SECONDARY;SPAN=1096;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:9:1:2.4:26.4,2.4,0:4:5:-26.41:26.41\n13\t81782375\t677551:1\tT\tT]13:81782948]\t20\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=677551:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:81782375(+)-13:81782948(+)__13_81781001_81806001D;SPAN=573;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:34:20.3:20.3,0,63.2:0:9:-20.15:21.49\n13\t81782700\t677552:1\tT\tT]13:81782901]\t15\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=677552:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:81782700(+)-13:81782901(+)__13_81781001_81806001D;SPAN=201;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:40:15.2:15.2,0,84.5:0:8:-15.16:17.99\n13\t81782901\t677552:2\tT\tT]13:81782700]\t15\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=677552:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:81782700(+)-13:81782901(+)__13_81781001_81806001D;SPAN=201;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:40:15.2:15.2,0,84.5:0:8:-15.16:17.99\n13\t81782948\t677551:2\tA\tA]13:81782375]\t20\tPASS\tDISC_MAPQ=59;EVDNC=DSCRD;IMPRECISE;MAPQ=59;MATEID=677551:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:81782375(+)-13:81782948(+)__13_81781001_81806001D;SPAN=573;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:34:20.3:20.3,0,63.2:0:9:-20.15:21.49\n13\t81793562\t677548:2\tA\t]5:142077508]A\t46\tPASS\tDISC_MAPQ=55;EVDNC=DSCRD;IMPRECISE;MAPQ=55;MATEID=677548:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:142077508(+)-13:81793562(-)__13_81781001_81806001D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:16:16:4.2:46.2,4.2,0:0:16:-46.21:46.21\n13\t85488927\t70988:2\tT\t[2:9998890[T\t52\tPASS\tDISC_MAPQ=1;EVDNC=ASDIS;HOMSEQ=TATATAT;MAPQ=44;MATEID=70988:1;MATENM=0;NM=48;NUMPARTS=2;SCTG=c_2_9996001_10021001_50C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:18:6:4.8:52.8,4.8,0:11:8:-52.81:52.81\n13\t86269523\t678532:1\tC\t]Un_KN707957v1_decoy:11498]C\t59\tPASS\tEVDNC=ASSMB;HOMSEQ=AACCTTTACTGAACTTAAAATATG;MAPQ=60;MATEID=678532:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_13_86264501_86289501_11C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:20:5:5.4:59.4,5.4,0:20:0:-59.41:59.41\n13\t92007460\t680036:2\tT\t[13:66665661[T\t29\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=T;MAPQ=60;MATEID=680036:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_13_91997501_92022501_37C;SPAN=25341799;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:23:26.6:29.9,0,26.6:7:6:-29.85:29.85\n13\t92058480\t673423:2\tT\tT]13:66665768]\t22\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=673423:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:66665768(+)-13:92058480(+)__13_66664501_66689501D;SPAN=25392712;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:16:15.5:22.1,0,15.5:0:8:-21.93:21.93\n13\t93608748\t680421:1\tG\tG[13:93751818[\t46\tPASS\tEVDNC=ASSMB;HOMSEQ=ATG;MAPQ=60;MATEID=680421:2;MATENM=5;NM=1;NUMPARTS=2;SCTG=c_13_93737001_93762001_5C;SPAN=143070;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:16:5:4.2:46.2,4.2,0:16:0:-46.21:46.21\n13\t93751818\t680421:2\tA\t]13:93608748]A\t46\tPASS\tEVDNC=ASSMB;HOMSEQ=ATG;MAPQ=60;MATEID=680421:1;MATENM=1;NM=5;NUMPARTS=2;SCTG=c_13_93737001_93762001_5C;SPAN=143070;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:16:5:4.2:46.2,4.2,0:16:0:-46.21:46.21\n13\t93796911\t680443:1\tT\t]13:93797097]T\t32\tPASS\tEVDNC=ASSMB;HOMSEQ=T;MAPQ=60;MATEID=680443:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_13_93786001_93811001_10C;SPAN=186;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:26:32.3:32.3,0,32.3:12:0:-32.3:32.3\n13\t93797097\t680443:2\tT\tT[13:93796911[\t32\tPASS\tEVDNC=ASSMB;HOMSEQ=T;MAPQ=60;MATEID=680443:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_13_93786001_93811001_10C;SPAN=186;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:26:32.3:32.3,0,32.3:12:0:-32.3:32.3\n13\t96800817\t681120:1\tT\t]13:96829051]T\t99\tPASS\tDISC_MAPQ=59;EVDNC=ASDIS;HOMSEQ=TT;MAPQ=60;MATEID=681120:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_13_96824001_96849001_1C;SPAN=28234;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:36:17:9.9:108.9,9.9,0:25:26:-108.9:108.9\n13\t96829051\t681120:2\tT\tT[13:96800817[\t99\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TT;MAPQ=60;MATEID=681120:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_13_96824001_96849001_1C;SPAN=28234;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:36:17:9.9:108.9,9.9,0:25:26:-108.9:108.9\n13\t101241852\t682110:1\tC\tC[13:101244073[\t33\tPASS\tDISC_MAPQ=57;EVDNC=DSCRD;IMPRECISE;MAPQ=57;MATEID=682110:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:101241852(+)-13:101244073(-)__13_101234001_101259001D;SPAN=2221;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:11:3:3:33,3,0:0:11:-33.01:33.01\n13\t101244073\t682110:2\tA\t]13:101241852]A\t33\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=682110:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:101241852(+)-13:101244073(-)__13_101234001_101259001D;SPAN=2221;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:11:3:3:33,3,0:0:11:-33.01:33.01\n13\t107584405\t916294:1\tC\tC]22:28669946]\t32\tPASS\tEVDNC=ASSMB;HOMSEQ=TTC;MAPQ=60;MATEID=916294:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_22_28665001_28690001_142C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:16:72:32.6:32.6,0,148.1:16:0:-32.58:36.8\n13\t110928542\t684409:1\tA\t]13:110928733]A\t29\tPASS\tEVDNC=ASSMB;HOMSEQ=ATTT;MAPQ=60;MATEID=684409:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_13_110911501_110936501_0C;SPAN=191;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:38:29:29,0,65.3:12:0:-28.93:29.75\n13\t110928733\t684409:2\tT\tT[13:110928542[\t29\tPASS\tEVDNC=ASSMB;HOMSEQ=ATTT;MAPQ=60;MATEID=684409:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_13_110911501_110936501_0C;SPAN=191;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:38:29:29,0,65.3:12:0:-28.93:29.75\n13\t110938204\t684417:1\tG\t]13:110938379]G\t20\tPASS\tEVDNC=ASSMB;INSERTION=GCATGTCCTGGAGAAAG;MAPQ=60;MATEID=684417:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_13_110936001_110961001_10C;SPAN=175;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:32:20.9:20.9,0,57.2:9:0:-20.71:21.77\n13\t110938379\t684417:2\tC\tC[13:110938204[\t20\tPASS\tEVDNC=ASSMB;INSERTION=GCATGTCCTGGAGAAAG;MAPQ=60;MATEID=684417:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_13_110936001_110961001_10C;SPAN=175;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:32:20.9:20.9,0,57.2:9:0:-20.71:21.77\n13\t111790677\t684590:1\tT\t]13:111790963]T\t48\tPASS\tEVDNC=ASSMB;HOMSEQ=TGTCCATGTCTGTCTGT;MAPQ=60;MATEID=684590:2;MATENM=0;NM=3;NUMPARTS=2;SCTG=c_13_111769001_111794001_19C;SPAN=286;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:17:28:21.8:48.2,0,21.8:17:0:-48.77:48.77\n13\t111790963\t684590:2\tT\tT[13:111790677[\t48\tPASS\tEVDNC=ASSMB;HOMSEQ=TGTCCATGTCTGTCTGT;MAPQ=60;MATEID=684590:1;MATENM=3;NM=0;NUMPARTS=2;SCTG=c_13_111769001_111794001_19C;SPAN=286;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:17:28:21.8:48.2,0,21.8:17:0:-48.77:48.77\n13\t111793420\t684595:1\tT\tT]Un_JTFH01000010v1_decoy:9358]\t42\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=684595:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_13_111769001_111794001_29C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:14:4:3.9:42.9,3.9,0:14:0:-42.91:42.91\n13\t113136637\t684857:1\tT\tT[13:113136950[\t46\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AATTCTTGTACTTTT;MAPQ=60;MATEID=684857:2;MATENM=4;NM=0;NUMPARTS=2;SCTG=c_13_113116501_113141501_0C;SPAN=313;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:15:11:4.2:46.2,4.2,0:11:6:-46.21:46.21\n13\t113136950\t684857:2\tA\t]13:113136637]A\t46\tPASS\tDISC_MAPQ=49;EVDNC=ASDIS;HOMSEQ=AATTCTTGTACTTTT;MAPQ=60;MATEID=684857:1;MATENM=0;NM=4;NUMPARTS=2;SCTG=c_13_113116501_113141501_0C;SPAN=313;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:15:11:4.2:46.2,4.2,0:11:6:-46.21:46.21\n13\t113802656\t685090:1\tA\tA[13:113803662[\t59\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=685090:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:113802656(+)-13:113803662(-)__13_113802501_113827501D;SPAN=1006;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:20:4:5.4:59.4,5.4,0:0:20:-59.41:59.41\n13\t113803662\t685090:2\tC\t]13:113802656]C\t59\tPASS\tDISC_MAPQ=49;EVDNC=DSCRD;IMPRECISE;MAPQ=49;MATEID=685090:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:113802656(+)-13:113803662(-)__13_113802501_113827501D;SPAN=1006;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:20:4:5.4:59.4,5.4,0:0:20:-59.41:59.41\n14\t16127970\t685851:1\tA\tA[14:16129237[\t11\tPASS\tDISC_MAPQ=56;EVDNC=DSCRD;IMPRECISE;MAPQ=56;MATEID=685851:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=14:16127970(+)-14:16129237(-)__14_16121001_16146001D;SPAN=1267;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:67:11:11,0,156.2:0:9:-10.88:18.53\n14\t16129237\t685851:2\tA\t]14:16127970]A\t11\tPASS\tDISC_MAPQ=17;EVDNC=DSCRD;IMPRECISE;MAPQ=17;MATEID=685851:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=14:16127970(+)-14:16129237(-)__14_16121001_16146001D;SPAN=1267;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:67:11:11,0,156.2:0:9:-10.88:18.53\n14\t16136222\t685870:1\tG\tG[14:16137856[\t7\tPASS\tDISC_MAPQ=46;EVDNC=DSCRD;IMPRECISE;MAPQ=46;MATEID=685870:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=14:16136222(+)-14:16137856(-)__14_16121001_16146001D;SPAN=1634;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:103:7.4:7.4,0,251.6:0:11:-7.359:21.48\n14\t16137856\t685870:2\tA\t]14:16136222]A\t7\tPASS\tDISC_MAPQ=57;EVDNC=DSCRD;IMPRECISE;MAPQ=57;MATEID=685870:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=14:16136222(+)-14:16137856(-)__14_16121001_16146001D;SPAN=1634;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:103:7.4:7.4,0,251.6:0:11:-7.359:21.48\n14\t18223617\t112281:2\tG\t[2:132243814[G\t95\tPASS\tDISC_MAPQ=58;EVDNC=DSCRD;IMPRECISE;MAPQ=58;MATEID=112281:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=2:132243814(-)-14:18223617(-)__2_132226501_132251501D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:32:29:8.7:95.7,8.7,0:0:32:-95.72:95.72\n14\t20083865\t686796:1\tA\t]14:20200104]A\t31\tPASS\tEVDNC=ASSMB;HOMSEQ=AAATA;MAPQ=60;MATEID=686796:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_20188001_20213001_24C;SPAN=116239;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:18:11.6:31.4,0,11.6:11:0:-31.6:31.6\n14\t20200104\t686796:2\tA\tA[14:20083865[\t31\tPASS\tEVDNC=ASSMB;HOMSEQ=AAATA;MAPQ=60;MATEID=686796:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_20188001_20213001_24C;SPAN=116239;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:18:11.6:31.4,0,11.6:11:0:-31.6:31.6\n14\t20254838\t686826:2\tA\tA]5:53611921]\t36\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;INSERTION=CAACTT;MAPQ=60;MATEID=686826:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_20237001_20262001_59C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:11:12:3.3:36.3,3.3,0:7:4:-35.86:35.86\n14\t20273533\t941661:1\tC\t]X:111769097]C\t42\tPASS\tDISC_MAPQ=54;EVDNC=ASDIS;INSERTION=A;MAPQ=60;MATEID=941661:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_23_111769001_111794001_6C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:13:14:3.9:42.9,3.9,0:9:8:-42.71:42.71\n14\t21484465\t687336:1\tC\tC[14:21486504[\t52\tPASS\tEVDNC=ASSMB;INSERTION=T;MAPQ=60;MATEID=687336:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_21486501_21511501_19C;SPAN=2039;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:18:5:4.8:52.8,4.8,0:18:0:-52.81:52.81\n14\t21486504\t687336:2\tT\t]14:21484465]T\t52\tPASS\tEVDNC=ASSMB;INSERTION=T;MAPQ=60;MATEID=687336:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_21486501_21511501_19C;SPAN=2039;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:18:5:4.8:52.8,4.8,0:18:0:-52.81:52.81\n14\t23900202\t688158:1\tA\t]14:23900406]A\t53\tPASS\tEVDNC=ASSMB;INSERTION=A;MAPQ=60;MATEID=688158:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_23887501_23912501_23C;SPAN=204;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:20:46:53.3:53.3,0,59.9:20:0:-53.09:53.14\n14\t23900406\t688158:2\tG\tG[14:23900202[\t53\tPASS\tEVDNC=ASSMB;INSERTION=A;MAPQ=60;MATEID=688158:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_23887501_23912501_23C;SPAN=204;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:20:46:53.3:53.3,0,59.9:20:0:-53.09:53.14\n14\t24793131\t688422:1\tG\tG[14:24793919[\t39\tPASS\tEVDNC=ASSMB;HOMSEQ=CAG;MAPQ=60;MATEID=688422:2;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_14_24769501_24794501_12C;SPAN=788;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:13:16:0.9:39.6,0.9,0:13:0:-40.41:40.41\n14\t24793919\t688422:2\tC\t]14:24793131]C\t39\tPASS\tEVDNC=ASSMB;HOMSEQ=CAG;MAPQ=60;MATEID=688422:1;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_14_24769501_24794501_12C;SPAN=788;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:13:16:0.9:39.6,0.9,0:13:0:-40.41:40.41\n14\t25677909\t688735:1\tT\tT[14:25678252[\t85\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=GAATTTAAGGTTTAT;MAPQ=60;MATEID=688735:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_25676001_25701001_30C;SPAN=343;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:28:22:7.8:85.8,7.8,0:22:8:-85.82:85.82\n14\t25678252\t688735:2\tG\t]14:25677909]G\t85\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=GAATTTAAGGTTTAT;MAPQ=60;MATEID=688735:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_25676001_25701001_30C;SPAN=343;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:28:22:7.8:85.8,7.8,0:22:8:-85.82:85.82\n14\t26232412\t688910:1\tA\tA[14:26232713[\t17\tPASS\tEVDNC=ASSMB;HOMSEQ=GAAAGAAAGAA;MAPQ=60;MATEID=688910:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_26215001_26240001_53C;SPAN=301;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:32:17.6:17.6,0,60.5:8:0:-17.41:18.87\n14\t26232713\t688910:2\tG\t]14:26232412]G\t17\tPASS\tEVDNC=ASSMB;HOMSEQ=GAAAGAAAGAA;MAPQ=60;MATEID=688910:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_26215001_26240001_53C;SPAN=301;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:32:17.6:17.6,0,60.5:8:0:-17.41:18.87\n14\t29258843\t689881:1\tT\tT[14:29259597[\t95\tPASS\tEVDNC=ASSMB;HOMSEQ=GAGAATTCTTT;MAPQ=60;MATEID=689881:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_14_29253001_29278001_57C;SPAN=754;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:32:19:8.7:95.7,8.7,0:32:0:-95.72:95.72\n14\t29259597\t689881:2\tG\t]14:29258843]G\t95\tPASS\tEVDNC=ASSMB;HOMSEQ=GAGAATTCTTT;MAPQ=60;MATEID=689881:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_14_29253001_29278001_57C;SPAN=754;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:32:19:8.7:95.7,8.7,0:32:0:-95.72:95.72\n14\t29550324\t689981:1\tT\t]14:29597866]T\t38\tPASS\tEVDNC=ASSMB;INSERTION=AATACCTTTACCT;MAPQ=60;MATEID=689981:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_29596001_29621001_6C;SPAN=47542;SUBN=4;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:17:2:38.3,0,2:13:0:-39.65:39.65\n14\t29597866\t689981:2\tA\tA[14:29550324[\t38\tPASS\tEVDNC=ASSMB;INSERTION=AATACCTTTACCT;MAPQ=60;MATEID=689981:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_29596001_29621001_6C;SPAN=47542;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:17:2:38.3,0,2:13:0:-39.65:39.65\n14\t30183739\t690144:1\tT\t]14:30390239]T\t36\tPASS\tEVDNC=ASSMB;HOMSEQ=TTC;MAPQ=60;MATEID=690144:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_30380001_30405001_60C;SPAN=206500;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:22:17:36.8,0,17:13:0:-37.05:37.05\n14\t30390239\t690144:2\tC\tC[14:30183739[\t36\tPASS\tEVDNC=ASSMB;HOMSEQ=TTC;MAPQ=60;MATEID=690144:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_30380001_30405001_60C;SPAN=206500;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:22:17:36.8,0,17:13:0:-37.05:37.05\n14\t30517301\t690169:1\tG\tG[14:30517556[\t17\tPASS\tEVDNC=ASSMB;INSERTION=GTGCCAA;MAPQ=60;MATEID=690169:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_30502501_30527501_21C;SPAN=255;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:33:17.3:17.3,0,63.5:8:0:-17.13:18.75\n14\t30517556\t690169:2\tA\t]14:30517301]A\t17\tPASS\tEVDNC=ASSMB;INSERTION=GTGCCAA;MAPQ=60;MATEID=690169:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_30502501_30527501_21C;SPAN=255;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:33:17.3:17.3,0,63.5:8:0:-17.13:18.75\n14\t31473803\t690512:1\tT\tT[14:31474115[\t24\tPASS\tEVDNC=ASSMB;HOMSEQ=GCAAATCTTTTCTT;MAPQ=60;MATEID=690512:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_31458001_31483001_77C;SPAN=312;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:30:24.5:24.5,0,50.9:10:0:-24.58:25.08\n14\t31474115\t690512:2\tG\t]14:31473803]G\t24\tPASS\tEVDNC=ASSMB;HOMSEQ=GCAAATCTTTTCTT;MAPQ=60;MATEID=690512:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_31458001_31483001_77C;SPAN=312;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:30:24.5:24.5,0,50.9:10:0:-24.58:25.08\n14\t32157501\t690790:1\tA\t[14:32193596[A\t19\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;INSERTION=TGAC;MAPQ=60;MATEID=690790:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_32193001_32218001_25C;SPAN=36095;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:7:13:12.8:19.4,0,12.8:5:4:-19.51:19.51\n14\t32193596\t690790:2\tA\t[14:32157501[A\t19\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;INSERTION=TGAC;MAPQ=60;MATEID=690790:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_32193001_32218001_25C;SPAN=36095;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:7:13:12.8:19.4,0,12.8:5:4:-19.51:19.51\n14\t33266964\t691140:1\tA\t]14:33377878]A\t36\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=A;MAPQ=60;MATEID=691140:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_33369001_33394001_65C;SPAN=110914;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:11:12:3.3:36.3,3.3,0:9:3:-35.86:35.86\n14\t33377878\t691140:2\tA\tA[14:33266964[\t36\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=A;MAPQ=60;MATEID=691140:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_33369001_33394001_65C;SPAN=110914;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:11:12:3.3:36.3,3.3,0:9:3:-35.86:35.86\n14\t34836097\t691617:1\tA\tA[14:34836416[\t59\tPASS\tEVDNC=ASSMB;HOMSEQ=AAAACTTTCTATA;MAPQ=60;MATEID=691617:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_34814501_34839501_90C;SPAN=319;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:20:24:0:59.4,0,0:20:0:-62.69:62.69\n14\t34836416\t691617:2\tA\t]14:34836097]A\t59\tPASS\tEVDNC=ASSMB;HOMSEQ=AAAACTTTCTATA;MAPQ=60;MATEID=691617:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_34814501_34839501_90C;SPAN=319;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:20:24:0:59.4,0,0:20:0:-62.69:62.69\n14\t34932207\t691675:1\tA\tA[14:34932518[\t30\tPASS\tEVDNC=ASSMB;HOMSEQ=AAGAAATTTCA;MAPQ=60;MATEID=691675:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_14_34912501_34937501_54C;SPAN=311;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:21:20.6:30.5,0,20.6:11:0:-30.47:30.47\n14\t34932518\t691675:2\tA\t]14:34932207]A\t30\tPASS\tEVDNC=ASSMB;HOMSEQ=AAGAAATTTCA;MAPQ=60;MATEID=691675:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_14_34912501_34937501_54C;SPAN=311;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:21:20.6:30.5,0,20.6:11:0:-30.47:30.47\n14\t35038580\t691752:1\tC\tC[14:35040301[\t27\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=691752:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=14:35038580(+)-14:35040301(-)__14_35035001_35060001D;SPAN=1721;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:31:27.8:27.8,0,47.6:0:11:-27.6:27.96\n14\t35040301\t691752:2\tA\t]14:35038580]A\t27\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=691752:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=14:35038580(+)-14:35040301(-)__14_35035001_35060001D;SPAN=1721;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:31:27.8:27.8,0,47.6:0:11:-27.6:27.96\n14\t37047457\t692387:2\tG\t]4:135304935]G\t21\tPASS\tEVDNC=ASSMB;INSERTION=TG;MAPQ=60;MATEID=692387:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_37044001_37069001_19C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:17:18.5:21.8,0,18.5:8:0:-21.63:21.63\n14\t37300358\t692473:1\tG\tG]16:61045452]\t22\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=692473:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=14:37300358(+)-16:61045452(+)__14_37289001_37314001D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:13:9.5:22.7,0,9.5:0:8:-23.02:23.02\n14\t37562864\t692591:1\tT\t]14:37597657]T\t99\tPASS\tEVDNC=ASSMB;HOMSEQ=T;MAPQ=60;MATEID=692591:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_37583001_37608001_85C;SPAN=34793;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:40:33:11.1:122.1,11.1,0:40:0:-122.1:122.1\n14\t37592330\t692637:1\tG\t]14:37715510]G\t32\tPASS\tDISC_MAPQ=255;EVDNC=ASDIS;HOMSEQ=GGCT;MAPQ=60;MATEID=692637:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_37705501_37730501_45C;SPAN=123180;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:25:29.3:32.6,0,29.3:8:9:-32.59:32.59\n14\t37597657\t692591:2\tT\tT[14:37562864[\t99\tPASS\tEVDNC=ASSMB;HOMSEQ=T;MAPQ=60;MATEID=692591:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_37583001_37608001_85C;SPAN=34793;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:40:33:11.1:122.1,11.1,0:40:0:-122.1:122.1\n14\t37715510\t692637:2\tT\tT[14:37592330[\t32\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=GGCT;MAPQ=60;MATEID=692637:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_37705501_37730501_45C;SPAN=123180;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:25:29.3:32.6,0,29.3:8:9:-32.59:32.59\n14\t37776046\t692663:1\tT\tT[14:37776247[\t99\tPASS\tEVDNC=ASSMB;HOMSEQ=TGGGTCTTGATTCTTT;MAPQ=60;MATEID=692663:2;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_14_37754501_37779501_67C;SPAN=201;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:35:20:9.6:105.6,9.6,0:35:0:-105.6:105.6\n14\t37776247\t692663:2\tT\t]14:37776046]T\t99\tPASS\tEVDNC=ASSMB;HOMSEQ=TGGGTCTTGATTCTTT;MAPQ=60;MATEID=692663:1;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_14_37754501_37779501_67C;SPAN=201;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:35:20:9.6:105.6,9.6,0:35:0:-105.6:105.6\n14\t37777674\t692738:1\tC\t]14:37911211]C\t24\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=C;MAPQ=60;MATEID=692738:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_37901501_37926501_37C;SPAN=133537;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:29:24.8:24.8,0,47.9:9:6:-24.86:25.27\n14\t37911211\t692738:2\tC\tC[14:37777674[\t24\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=C;MAPQ=60;MATEID=692738:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_37901501_37926501_37C;SPAN=133537;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:29:24.8:24.8,0,47.9:9:6:-24.86:25.27\n14\t38174306\t692839:1\tC\tC[14:38174608[\t52\tPASS\tEVDNC=ASSMB;HOMSEQ=CACCCTGTGCCTTTTC;MAPQ=60;MATEID=692839:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_14_38171001_38196001_77C;SPAN=302;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:18:25:9.5:52.4,0,9.5:18:0:-53.96:53.96\n14\t38174608\t692839:2\tC\t]14:38174306]C\t52\tPASS\tEVDNC=ASSMB;HOMSEQ=CACCCTGTGCCTTTTC;MAPQ=60;MATEID=692839:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_14_38171001_38196001_77C;SPAN=302;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:18:25:9.5:52.4,0,9.5:18:0:-53.96:53.96\n14\t39033514\t693049:1\tT\t]14:39033642]T\t85\tPASS\tEVDNC=ASSMB;HOMSEQ=TAA;MAPQ=60;MATEID=693049:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_39028501_39053501_78C;SPAN=128;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:31:61:65.6:85.4,0,65.6:31:0:-85.28:85.28\n14\t39033642\t693049:2\tA\tA[14:39033514[\t85\tPASS\tEVDNC=ASSMB;HOMSEQ=TAA;MAPQ=60;MATEID=693049:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_39028501_39053501_78C;SPAN=128;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:31:61:65.6:85.4,0,65.6:31:0:-85.28:85.28\n14\t39411765\t693274:1\tC\t]14:39412419]C\t16\tPASS\tEVDNC=ASSMB;HOMSEQ=CCC;MAPQ=60;MATEID=693274:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_39396001_39421001_45C;SPAN=654;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:47:16.7:16.7,0,99.2:9:0:-16.5:20.04\n14\t39412419\t693274:2\tC\tC[14:39411765[\t16\tPASS\tEVDNC=ASSMB;HOMSEQ=CCC;MAPQ=60;MATEID=693274:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_39396001_39421001_45C;SPAN=654;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:47:16.7:16.7,0,99.2:9:0:-16.5:20.04\n14\t39629205\t693352:1\tT\tT[14:39631010[\t56\tPASS\tEVDNC=ASSMB;HOMSEQ=AGAGTCCTGAAATAACTT;MAPQ=60;MATEID=693352:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_39616501_39641501_23C;SPAN=1805;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:20:33:23.9:56.9,0,23.9:20:0:-57.35:57.35\n14\t39631010\t693352:2\tA\t]14:39629205]A\t56\tPASS\tEVDNC=ASSMB;HOMSEQ=AGAGTCCTGAAATAACTT;MAPQ=60;MATEID=693352:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_39616501_39641501_23C;SPAN=1805;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:20:33:23.9:56.9,0,23.9:20:0:-57.35:57.35\n14\t40140611\t693536:1\tA\tA[14:40148469[\t99\tPASS\tEVDNC=ASSMB;INSERTION=CAGGCTCCTTTGTAAATAA;MAPQ=60;MATEID=693536:2;MATENM=5;NM=0;NUMPARTS=2;SCTG=c_14_40131001_40156001_3C;SPAN=7858;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:42:19:11.7:128.7,11.7,0:42:0:-128.7:128.7\n14\t40148469\t693536:2\tT\t]14:40140611]T\t99\tPASS\tEVDNC=ASSMB;INSERTION=CAGGCTCCTTTGTAAATAA;MAPQ=60;MATEID=693536:1;MATENM=0;NM=5;NUMPARTS=2;SCTG=c_14_40131001_40156001_3C;SPAN=7858;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:42:19:11.7:128.7,11.7,0:42:0:-128.7:128.7\n14\t40498185\t693818:1\tA\tA]14:40771514]\t18\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;INSERTION=CT;MAPQ=60;MATEID=693818:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_40768001_40793001_9C;SPAN=273329;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:7:15:18.8:18.8,0,18.8:6:2:-18.89:18.89\n14\t40498855\t693697:1\tT\tT[14:40559038[\t38\tPASS\tEVDNC=ASSMB;HOMSEQ=AGTT;MAPQ=60;MATEID=693697:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_14_40547501_40572501_2C;SPAN=60183;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:18:5:38,0,5:13:0:-39.01:39.01\n14\t40559038\t693697:2\tA\t]14:40498855]A\t38\tPASS\tEVDNC=ASSMB;HOMSEQ=AGTT;MAPQ=60;MATEID=693697:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_14_40547501_40572501_2C;SPAN=60183;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:18:5:38,0,5:13:0:-39.01:39.01\n14\t40771514\t693818:2\tC\tC]14:40498185]\t18\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;INSERTION=CT;MAPQ=60;MATEID=693818:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_40768001_40793001_9C;SPAN=273329;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:7:15:18.8:18.8,0,18.8:6:2:-18.89:18.89\n14\t40906937\t693878:1\tT\tT]14:40907574]\t56\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=693878:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=14:40906937(+)-14:40907574(+)__14_40890501_40915501D;SPAN=637;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:20:34:26.9:56.6,0,26.9:0:20:-56.93:56.93\n14\t40907574\t693878:2\tT\tT]14:40906937]\t56\tPASS\tDISC_MAPQ=57;EVDNC=DSCRD;IMPRECISE;MAPQ=57;MATEID=693878:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=14:40906937(+)-14:40907574(+)__14_40890501_40915501D;SPAN=637;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:20:34:26.9:56.6,0,26.9:0:20:-56.93:56.93\n14\t41200462\t703848:1\tG\t]14:69277912]G\t18\tPASS\tDISC_MAPQ=255;EVDNC=ASDIS;HOMSEQ=GCC;MAPQ=60;MATEID=703848:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_69261501_69286501_67C;SPAN=28077450;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:7:16:18.8:18.8,0,18.8:1:7:-18.61:18.62\n14\t42279188\t694411:1\tT\tT[14:42279553[\t1\tPASS\tEVDNC=ASSMB;HOMSEQ=AAGTGCTGGGATTACAGGCGTGAGCCACCGT;MAPQ=60;MATEID=694411:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_42262501_42287501_0C;SPAN=365;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:4:41:1.7:1.7,0,100.7:4:0:-1.679:7.644\n14\t42279553\t694411:2\tA\t]14:42279188]A\t1\tPASS\tEVDNC=ASSMB;HOMSEQ=AAGTGCTGGGATTACAGGCGTGAGCCACCGT;MAPQ=60;MATEID=694411:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_42262501_42287501_0C;SPAN=365;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:4:41:1.7:1.7,0,100.7:4:0:-1.679:7.644\n14\t42291888\t694422:1\tT\tT[14:42292221[\t78\tPASS\tEVDNC=ASSMB;HOMSEQ=AAAATAAAAAATTTT;MAPQ=60;MATEID=694422:2;MATENM=0;NM=5;NUMPARTS=2;SCTG=c_14_42287001_42312001_18C;SPAN=333;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:27:37:12.8:78.8,0,12.8:27:0:-81.25:81.25\n14\t42292221\t694422:2\tA\t]14:42291888]A\t78\tPASS\tEVDNC=ASSMB;HOMSEQ=AAAATAAAAAATTTT;MAPQ=60;MATEID=694422:1;MATENM=5;NM=0;NUMPARTS=2;SCTG=c_14_42287001_42312001_18C;SPAN=333;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:27:37:12.8:78.8,0,12.8:27:0:-81.25:81.25\n14\t42561542\t694524:2\tT\t[5:1364018[T\t39\tPASS\tDISC_MAPQ=54;EVDNC=ASDIS;HOMSEQ=TTG;MAPQ=60;MATEID=694524:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_42556501_42581501_72C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:25:22.7:39.2,0,22.7:5:11:-39.39:39.39\n14\t44082765\t707096:1\tT\t[14:77757284[T\t46\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=A;MAPQ=60;MATEID=707096:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_77738501_77763501_83C;SPAN=33674519;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:16:22:7.1:46.7,0,7.1:15:3:-48.1:48.1\n14\t44119784\t695089:1\tA\tA[14:44122512[\t36\tPASS\tDISC_MAPQ=20;EVDNC=DSCRD;IMPRECISE;MAPQ=20;MATEID=695089:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=14:44119784(+)-14:44122512(-)__14_44100001_44125001D;SPAN=2728;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:23:20:36.5,0,20:0:13:-36.66:36.66\n14\t44122512\t695089:2\tA\t]14:44119784]A\t36\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=695089:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=14:44119784(+)-14:44122512(-)__14_44100001_44125001D;SPAN=2728;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:23:20:36.5,0,20:0:13:-36.66:36.66\n14\t44417492\t695199:1\tC\tC[14:44417494[\t99\tPASS\tDISC_MAPQ=255;EVDNC=TSI_G;HOMSEQ=TATCTCTAGA;INSERTION=TTCCTGGTCAGTAAGACCTCAAAAGGTTAAATACTAACAACTTACACACCTTAAATGTTTATCAAAAATTACTGGGCAATATTAATTGGCTTCACTCCACCTTGGGCATAACTACTGATAAGTTACAAAACCTGTTTTCTACCCTAAAGGGCAATATAGCCCTACACTGTCCCAGGTATTTAACTCCTGCAGCAAAAAGGGAAATTGAGGAAGTAGAGCAAGCTCTTTCTCGGAGGCAACTAGATCGCATAGACCCATGATATTCAGTTCAATAGTTTGTTTTTCTTAGTAAACATTCCCTAACAGGATTAATAAGATAGATGGCCCCAGGGCTATGCTTCCTAGAATGGGTTTTTTGCTCACTTACCAGGACTAAAACACTATCTCCCTACATCCAGCTAGTTAGTAAAGTTATCTATACAGGCCACAGATGATGCCATCAGTTGCTAGGTTATGACCCTGAGGTCATAAGAATTCCTTGAGTAAAAAGTAATTCGAAGCAGTATTGCCCT;MAPQ=60;MATEID=695199:2;MATENM=0;NM=1;NUMPARTS=5;SCTG=c_14_44394001_44419001_79C;SECONDARY;SPAN=2;SUBN=2;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:41:40:11.4:125.4,11.4,0:41:0:-125.4:125.4\n14\t44417494\t695199:2\tT\t]14:44417492]T\t99\tPASS\tDISC_MAPQ=255;EVDNC=TSI_G;HOMSEQ=TATCTCTAGA;INSERTION=TTCCTGGTCAGTAAGACCTCAAAAGGTTAAATACTAACAACTTACACACCTTAAATGTTTATCAAAAATTACTGGGCAATATTAATTGGCTTCACTCCACCTTGGGCATAACTACTGATAAGTTACAAAACCTGTTTTCTACCCTAAAGGGCAATATAGCCCTACACTGTCCCAGGTATTTAACTCCTGCAGCAAAAAGGGAAATTGAGGAAGTAGAGCAAGCTCTTTCTCGGAGGCAACTAGATCGCATAGACCCATGATATTCAGTTCAATAGTTTGTTTTTCTTAGTAAACATTCCCTAACAGGATTAATAAGATAGATGGCCCCAGGGCTATGCTTCCTAGAATGGGTTTTTTGCTCACTTACCAGGACTAAAACACTATCTCCCTACATCCAGCTAGTTAGTAAAGTTATCTATACAGGCCACAGATGATGCCATCAGTTGCTAGGTTATGACCCTGAGGTCATAAGAATTCCTTGAGTAAAAAGTAATTCGAAGCAGTATTGCCCT;MAPQ=60;MATEID=695199:1;MATENM=1;NM=0;NUMPARTS=5;SCTG=c_14_44394001_44419001_79C;SECONDARY;SPAN=2;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:41:40:11.4:125.4,11.4,0:41:0:-125.4:125.4\n14\t45854840\t861822:1\tA\tA]20:6368548]\t27\tPASS\tDISC_MAPQ=55;EVDNC=DSCRD;IMPRECISE;MAPQ=55;MATEID=861822:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=14:45854840(+)-20:6368548(+)__20_6345501_6370501D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:19:17.9:27.8,0,17.9:0:10:-27.73:27.73\n14\t46108735\t695643:1\tG\tG[14:46109041[\t56\tPASS\tEVDNC=ASSMB;HOMSEQ=AAAAGCCTCCAATTG;MAPQ=60;MATEID=695643:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_46109001_46134001_13C;SPAN=306;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:19:12:5.1:56.1,5.1,0:19:0:-56.11:56.11\n14\t46109041\t695643:2\tA\t]14:46108735]A\t56\tPASS\tEVDNC=ASSMB;HOMSEQ=AAAAGCCTCCAATTG;MAPQ=60;MATEID=695643:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_46109001_46134001_13C;SPAN=306;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:19:12:5.1:56.1,5.1,0:19:0:-56.11:56.11\n14\t46648665\t701678:1\tG\t[14:62759566[G\t99\tPASS\tDISC_MAPQ=31;EVDNC=ASDIS;MAPQ=41;MATEID=701678:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_62744501_62769501_35C;SPAN=16110901;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:38:17:10.5:115.5,10.5,0:31:15:-115.5:115.5\n14\t46956857\t695916:1\tT\t]14:46957155]T\t1\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=695916:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_46942001_46967001_19C;SPAN=298;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:4:43:1.1:1.1,0,106.7:4:0:-1.117:7.557\n14\t46957155\t695916:2\tT\tT[14:46956857[\t1\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=695916:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_46942001_46967001_19C;SPAN=298;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:4:43:1.1:1.1,0,106.7:4:0:-1.117:7.557\n14\t47514459\t820233:1\tG\tG]18:6432646]\t25\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=820233:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=14:47514459(+)-18:6432646(+)__18_6419001_6444001D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:15:12.2:25.4,0,12.2:0:9:-25.74:25.74\n14\t47597634\t696119:1\tA\tA[14:47598663[\t29\tPASS\tEVDNC=ASSMB;HOMSEQ=TA;MAPQ=60;MATEID=696119:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_47579001_47604001_3C;SPAN=1029;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:25:29.3:29.3,0,32.6:11:0:-29.28:29.3\n14\t47598663\t696119:2\tT\t]14:47597634]T\t29\tPASS\tEVDNC=ASSMB;HOMSEQ=TA;MAPQ=60;MATEID=696119:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_47579001_47604001_3C;SPAN=1029;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:25:29.3:29.3,0,32.6:11:0:-29.28:29.3\n14\t47694624\t820234:1\tT\t[18:6432597[T\t46\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=T;MAPQ=60;MATEID=820234:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_18_6419001_6444001_8C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:16:13:4.2:46.2,4.2,0:11:5:-46.21:46.21\n14\t47771434\t696185:1\tC\tC[X:150398269[\t22\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=696185:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=14:47771434(+)-23:150398269(-)__14_47750501_47775501D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:16:15.5:22.1,0,15.5:0:8:-21.93:21.93\n14\t47771706\t948160:1\tA\t]X:150398432]A\t23\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=948160:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=14:47771706(-)-23:150398432(+)__23_150381001_150406001D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:8:3:2.1:23.1,2.1,0:0:8:-23.11:23.11\n14\t48882209\t696542:1\tC\tC[14:49023146[\t99\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=GGTGCAGTGGCTCATGCCTGTAATCCCAGCACTTTGGGAGGCTGAGGTGGGTGGATCACGAGGTCAGGAGTTTGAGACCAGCCTGACCAACATGGTGAAAC;INSERTION=TTAAATAGTTATTTTCAAATAACTTGATGTGATTGTGGAAAACAGTGATAGACAAATCAAAATGACCTCCAACTATAAAGAAAATTCTTGAGCCA;MAPQ=0;MATEID=696542:2;MATENM=1;NM=5;NUMPARTS=2;REPSEQ=CC;SCTG=c_14_48877501_48902501_3C;SECONDARY;SPAN=140937;SUBN=1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:39:17:10.8:118.8,10.8,0:35:8:-118.8:118.8\n14\t49023146\t696542:2\tG\t]14:48882209]G\t99\tPASS\tDISC_MAPQ=56;EVDNC=ASDIS;HOMSEQ=GGTGCAGTGGCTCATGCCTGTAATCCCAGCACTTTGGGAGGCTGAGGTGGGTGGATCACGAGGTCAGGAGTTTGAGACCAGCCTGACCAACATGGTGAAAC;INSERTION=TTAAATAGTTATTTTCAAATAACTTGATGTGATTGTGGAAAACAGTGATAGACAAATCAAAATGACCTCCAACTATAAAGAAAATTCTTGAGCCA;MAPQ=60;MATEID=696542:1;MATENM=5;NM=1;NUMPARTS=2;REPSEQ=CC;SCTG=c_14_48877501_48902501_3C;SECONDARY;SPAN=140937;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:39:17:10.8:118.8,10.8,0:35:8:-118.8:118.8\n14\t49725332\t696842:1\tA\t]14:49725627]A\t99\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;INSERTION=ATAAAAATAATAATGTAATAAACTGCAAAAATT;MAPQ=60;MATEID=696842:2;MATENM=2;NM=1;NUMPARTS=2;SCTG=c_14_49710501_49735501_8C;SPAN=295;SUBN=5;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:43:86:98:117.8,0,98:42:9:-117.9:117.9\n14\t49725627\t696842:2\tT\tT[14:49725332[\t99\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;INSERTION=ATAAAAATAATAATGTAATAAACTGCAAAAATT;MAPQ=60;MATEID=696842:1;MATENM=1;NM=2;NUMPARTS=2;SCTG=c_14_49710501_49735501_8C;SPAN=295;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:43:86:98:117.8,0,98:42:9:-117.9:117.9\n14\t50942183\t697371:1\tC\tC[14:50942828[\t79\tPASS\tDISC_MAPQ=57;EVDNC=ASDIS;INSERTION=TCTGTCTC;MAPQ=60;MATEID=697371:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_50935501_50960501_74C;SPAN=645;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:24:26:7.2:79.2,7.2,0:16:18:-78.56:78.56\n14\t50942828\t697371:2\tA\t]14:50942183]A\t79\tPASS\tDISC_MAPQ=58;EVDNC=ASDIS;INSERTION=TCTGTCTC;MAPQ=60;MATEID=697371:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_50935501_50960501_74C;SPAN=645;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:24:26:7.2:79.2,7.2,0:16:18:-78.56:78.56\n14\t51134695\t697453:1\tT\tT[14:51134990[\t46\tPASS\tEVDNC=ASSMB;HOMSEQ=TTTTTTTTT;MAPQ=60;MATEID=697453:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_51131501_51156501_45C;SPAN=295;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:16:22:7.1:46.7,0,7.1:16:0:-48.1:48.1\n14\t51134990\t697453:2\tT\t]14:51134695]T\t46\tPASS\tEVDNC=ASSMB;HOMSEQ=TTTTTTTTT;MAPQ=60;MATEID=697453:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_51131501_51156501_45C;SPAN=295;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:16:22:7.1:46.7,0,7.1:16:0:-48.1:48.1\n14\t52201132\t697857:2\tG\tG[4:169359842[\t46\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=697857:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=4:169359842(-)-14:52201132(+)__14_52185001_52210001D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:15:15:4.2:46.2,4.2,0:0:15:-46.21:46.21\n14\t52425216\t697955:2\tT\t]4:60231729]T\t26\tPASS\tEVDNC=ASSMB;HOMSEQ=T;MAPQ=60;MATEID=697955:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_14_52405501_52430501_22C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:12:3.2:26.3,0,3.2:9:0:-27.29:27.29\n14\t52475035\t933494:1\tA\t]X:64507376]A\t42\tPASS\tDISC_MAPQ=38;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=933494:2;MATENM=0;NM=3;NUMPARTS=2;SCTG=c_23_64484001_64509001_20C;SPAN=-1;SUBN=4;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:14:4:3.9:42.9,3.9,0:10:9:-42.91:42.91\n14\t52476005\t697967:2\tT\tT[4:60232158[\t22\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=T;MAPQ=60;MATEID=697967:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_52454501_52479501_37C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:25:22.7:22.7,0,39.2:7:8:-22.68:22.95\n14\t54243631\t698723:1\tA\tA[14:54246968[\t34\tPASS\tEVDNC=ASSMB;HOMSEQ=TGA;MAPQ=60;MATEID=698723:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_54243001_54268001_35C;SPAN=3337;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:30:34.4:34.4,0,41:13:0:-34.48:34.51\n14\t54246968\t698723:2\tT\t]14:54243631]T\t34\tPASS\tEVDNC=ASSMB;HOMSEQ=TGA;MAPQ=60;MATEID=698723:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_54243001_54268001_35C;SPAN=3337;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:30:34.4:34.4,0,41:13:0:-34.48:34.51\n14\t54749560\t698839:2\tG\t]4:153256883]G\t22\tPASS\tEVDNC=ASSMB;INSERTION=CAAAACGCTAACAAAATAAATAG;MAPQ=60;MATEID=698839:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_54733001_54758001_25C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:25:22.7:22.7,0,39.2:9:0:-22.68:22.95\n14\t54941811\t13082:2\tA\t]1:53955314]A\t28\tPASS\tDISC_MAPQ=51;EVDNC=DSCRD;IMPRECISE;MAPQ=51;MATEID=13082:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:53955314(+)-14:54941811(-)__1_53949001_53974001D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:16:8.9:28.7,0,8.9:0:10:-28.89:28.89\n14\t55912669\t699197:2\tC\tC[4:153172444[\t36\tPASS\tDISC_MAPQ=58;EVDNC=ASDIS;MAPQ=60;MATEID=699197:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_55909001_55934001_46C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:23:20:36.5,0,20:11:9:-36.66:36.66\n14\t56200143\t699337:1\tA\t]14:56200312]A\t52\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=699337:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_56178501_56203501_117C;SPAN=169;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:21:62:52.1:52.1,0,101.6:21:0:-51.89:52.86\n14\t56200312\t699337:2\tT\tT[14:56200143[\t52\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=699337:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_56178501_56203501_117C;SPAN=169;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:21:62:52.1:52.1,0,101.6:21:0:-51.89:52.86\n14\t57720286\t699947:1\tC\t]22:28669457]C\t19\tPASS\tEVDNC=ASSMB;HOMSEQ=CA;MAPQ=60;MATEID=699947:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_57697501_57722501_12C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:26:19.1:19.1,0,45.5:8:0:-19.1:19.73\n14\t57720286\t916297:1\tC\t[22:28669458[C\t18\tPASS\tDISC_MAPQ=60;EVDNC=TSI_G;HOMSEQ=CA;INSERTION=GTGACTGAATCCCAAAATTATATTGGTAACATGGAAATTCCTGATAGGGGAAGAATATTCCCAGAAGTGTGACCAGTTAGGGCCAAAATAAAAGGTA;MAPQ=60;MATEID=916297:2;MATENM=0;NM=0;NUMPARTS=3;SCTG=c_22_28665001_28690001_91C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:15:111:18.5:18.5,0,259.4:15:2:-18.31:30.92\n14\t59078595\t700449:1\tG\tG[14:59078888[\t31\tPASS\tEVDNC=ASSMB;HOMSEQ=AAATAATACTTTTAG;MAPQ=60;MATEID=700449:2;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_14_59069501_59094501_45C;SPAN=293;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:29:31.4:31.4,0,41.3:12:0:-31.46:31.54\n14\t59078888\t700449:2\tA\t]14:59078595]A\t31\tPASS\tEVDNC=ASSMB;HOMSEQ=AAATAATACTTTTAG;MAPQ=60;MATEID=700449:1;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_14_59069501_59094501_45C;SPAN=293;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:29:31.4:31.4,0,41.3:12:0:-31.46:31.54\n14\t60447081\t700919:1\tA\t[14:60474536[A\t31\tPASS\tDISC_MAPQ=48;EVDNC=DSCRD;IMPRECISE;MAPQ=48;MATEID=700919:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=14:60447081(-)-14:60474536(-)__14_60466001_60491001D;SPAN=27455;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:17:8.6:31.7,0,8.6:0:11:-32.06:32.06\n14\t60474536\t700919:2\tT\t[14:60447081[T\t31\tPASS\tDISC_MAPQ=17;EVDNC=DSCRD;IMPRECISE;MAPQ=17;MATEID=700919:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=14:60447081(-)-14:60474536(-)__14_60466001_60491001D;SPAN=27455;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:17:8.6:31.7,0,8.6:0:11:-32.06:32.06\n14\t61081182\t701090:1\tA\t]14:61081313]A\t44\tPASS\tEVDNC=ASSMB;HOMSEQ=A;MAPQ=60;MATEID=701090:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_61078501_61103501_19C;SPAN=131;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:18:54:44.3:44.3,0,90.5:18:0:-44.24:45.15\n14\t61081313\t701090:2\tA\tA[14:61081182[\t44\tPASS\tEVDNC=ASSMB;HOMSEQ=A;MAPQ=60;MATEID=701090:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_61078501_61103501_19C;SPAN=131;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:18:54:44.3:44.3,0,90.5:18:0:-44.24:45.15\n14\t61172785\t701114:1\tA\t]14:61172905]A\t74\tPASS\tEVDNC=ASSMB;HOMSEQ=A;MAPQ=60;MATEID=701114:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_61152001_61177001_23C;SPAN=120;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:28:63:74.9:74.9,0,81.5:28:0:-74.72:74.75\n14\t61172905\t701114:2\tA\tA[14:61172785[\t74\tPASS\tEVDNC=ASSMB;HOMSEQ=A;MAPQ=60;MATEID=701114:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_61152001_61177001_23C;SPAN=120;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:28:63:74.9:74.9,0,81.5:28:0:-74.72:74.75\n14\t62759566\t701678:2\tA\t[14:46648665[A\t99\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;MAPQ=60;MATEID=701678:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_62744501_62769501_35C;SPAN=16110901;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:38:17:10.5:115.5,10.5,0:31:15:-115.5:115.5\n14\t63420770\t701926:1\tA\tA[14:63421085[\t53\tPASS\tEVDNC=ASSMB;HOMSEQ=AAAAAGTCAACCTGA;MAPQ=60;MATEID=701926:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_63406001_63431001_6C;SPAN=315;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:18:23:3.5:53,0,3.5:18:0:-55.29:55.29\n14\t63421085\t701926:2\tA\t]14:63420770]A\t53\tPASS\tEVDNC=ASSMB;HOMSEQ=AAAAAGTCAACCTGA;MAPQ=60;MATEID=701926:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_63406001_63431001_6C;SPAN=315;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:18:23:3.5:53,0,3.5:18:0:-55.29:55.29\n14\t64280428\t702277:2\tG\t]9:30288184]G\t33\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=702277:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_64263501_64288501_38C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:22:20.3:33.5,0,20.3:12:0:-33.55:33.55\n14\t64280468\t809228:1\tG\tG[17:57501629[\t21\tPASS\tEVDNC=ASSMB;INSERTION=AGAACTTGTTTTATTCACCTCATCCC;MAPQ=60;MATEID=809228:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_17_57501501_57526501_45C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:19:21.2:21.2,0,24.5:8:0:-21.07:21.11\n14\t64893678\t702536:1\tC\tC[14:64896823[\t64\tPASS\tEVDNC=ASSMB;HOMSEQ=AAGAATTTTC;MAPQ=60;MATEID=702536:2;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_14_64876001_64901001_87C;SPAN=3145;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:22:31:11.3:64.1,0,11.3:22:0:-65.69:65.69\n14\t64896823\t702536:2\tA\t]14:64893678]A\t64\tPASS\tEVDNC=ASSMB;HOMSEQ=AAGAATTTTC;MAPQ=60;MATEID=702536:1;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_14_64876001_64901001_87C;SPAN=3145;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:22:31:11.3:64.1,0,11.3:22:0:-65.69:65.69\n14\t64980572\t702567:2\tG\t]2:193680440]G\t44\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=702567:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=2:193680440(+)-14:64980572(-)__14_64974001_64999001D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:16:31:31.1:44.3,0,31.1:0:16:-44.17:44.17\n14\t65139670\t702623:1\tC\tC[14:65141330[\t99\tPASS\tDISC_MAPQ=47;EVDNC=ASDIS;HOMSEQ=GGTTCAAGCGATTCTCCTGCCTCAGCCTCCC;MAPQ=60;MATEID=702623:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_14_65121001_65146001_14C;SPAN=1660;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:44:33:12.3:135.3,12.3,0:26:28:-135.3:135.3\n14\t65141330\t702623:2\tG\t]14:65139670]G\t99\tPASS\tDISC_MAPQ=55;EVDNC=ASDIS;HOMSEQ=GGTTCAAGCGATTCTCCTGCCTCAGCCTCCC;MAPQ=60;MATEID=702623:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_14_65121001_65146001_14C;SPAN=1660;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:44:33:12.3:135.3,12.3,0:26:28:-135.3:135.3\n14\t65375817\t702738:1\tG\t[14:65376623[G\t33\tPASS\tDISC_MAPQ=55;EVDNC=DSCRD;IMPRECISE;MAPQ=55;MATEID=702738:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=14:65375817(-)-14:65376623(-)__14_65366001_65391001D;SPAN=806;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:34:33.5:33.5,0,50:0:13:-33.36:33.58\n14\t65375930\t702740:1\tA\tA]14:65376501]\t79\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=702740:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=14:65375930(+)-14:65376501(+)__14_65366001_65391001D;SPAN=571;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:26:26:7.2:79.2,7.2,0:0:26:-79.22:79.22\n14\t65376501\t702740:2\tC\tC]14:65375930]\t79\tPASS\tDISC_MAPQ=58;EVDNC=DSCRD;IMPRECISE;MAPQ=58;MATEID=702740:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=14:65375930(+)-14:65376501(+)__14_65366001_65391001D;SPAN=571;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:26:26:7.2:79.2,7.2,0:0:26:-79.22:79.22\n14\t65376623\t702738:2\tG\t[14:65375817[G\t33\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=702738:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=14:65375817(-)-14:65376623(-)__14_65366001_65391001D;SPAN=806;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:34:33.5:33.5,0,50:0:13:-33.36:33.58\n14\t65433282\t702815:1\tT\t]14:65599914]T\t32\tPASS\tEVDNC=ASSMB;HOMSEQ=TGCT;MAPQ=60;MATEID=702815:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_65586501_65611501_53C;SPAN=166632;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:27:32:32,0,35.3:12:0:-32.02:32.04\n14\t65599914\t702815:2\tT\tT[14:65433282[\t32\tPASS\tEVDNC=ASSMB;HOMSEQ=TGCT;MAPQ=60;MATEID=702815:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_65586501_65611501_53C;SPAN=166632;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:27:32:32,0,35.3:12:0:-32.02:32.04\n14\t65602452\t702822:1\tG\tG[14:65611229[\t53\tPASS\tDISC_MAPQ=55;EVDNC=DSCRD;IMPRECISE;MAPQ=55;MATEID=702822:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=14:65602452(+)-14:65611229(-)__14_65611001_65636001D;SPAN=8777;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:19:32:24.2:53.9,0,24.2:0:19:-54.21:54.21\n14\t65611229\t702822:2\tA\t]14:65602452]A\t53\tPASS\tDISC_MAPQ=52;EVDNC=DSCRD;IMPRECISE;MAPQ=52;MATEID=702822:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=14:65602452(+)-14:65611229(-)__14_65611001_65636001D;SPAN=8777;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:19:32:24.2:53.9,0,24.2:0:19:-54.21:54.21\n14\t68136341\t703476:1\tC\tC[14:68137015[\t78\tPASS\tEVDNC=ASSMB;HOMSEQ=CCTGTAATCCCAGCACTTTGGGAGGCC;MAPQ=60;MATEID=703476:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_68134501_68159501_47C;SPAN=674;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:27:37:12.8:78.8,0,12.8:27:0:-81.25:81.25\n14\t68137015\t703476:2\tC\t]14:68136341]C\t78\tPASS\tEVDNC=ASSMB;HOMSEQ=CCTGTAATCCCAGCACTTTGGGAGGCC;MAPQ=60;MATEID=703476:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_68134501_68159501_47C;SPAN=674;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:27:37:12.8:78.8,0,12.8:27:0:-81.25:81.25\n14\t68441295\t703565:1\tC\tC]14:68831305]\t22\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=703565:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=14:68441295(+)-14:68831305(+)__14_68428501_68453501D;SPAN=390010;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:15:15.5:22.1,0,15.5:0:8:-22.25:22.25\n14\t68831305\t703565:2\tT\tT]14:68441295]\t22\tPASS\tDISC_MAPQ=53;EVDNC=DSCRD;IMPRECISE;MAPQ=53;MATEID=703565:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=14:68441295(+)-14:68831305(+)__14_68428501_68453501D;SPAN=390010;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:15:15.5:22.1,0,15.5:0:8:-22.25:22.25\n14\t69277912\t703848:2\tC\tC[14:41200462[\t18\tPASS\tDISC_MAPQ=26;EVDNC=ASDIS;HOMSEQ=GCC;MAPQ=60;MATEID=703848:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_69261501_69286501_67C;SPAN=28077450;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:7:16:18.8:18.8,0,18.8:1:7:-18.61:18.62\n14\t69313596\t703864:1\tC\t]14:69313758]C\t47\tPASS\tEVDNC=ASSMB;HOMSEQ=CAG;MAPQ=60;MATEID=703864:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_14_69310501_69335501_58C;SPAN=162;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:19:56:47:47,0,93.2:19:0:-46.98:47.84\n14\t69313758\t703864:2\tG\tG[14:69313596[\t47\tPASS\tEVDNC=ASSMB;HOMSEQ=CAG;MAPQ=60;MATEID=703864:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_14_69310501_69335501_58C;SPAN=162;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:19:56:47:47,0,93.2:19:0:-46.98:47.84\n14\t72112667\t704667:1\tG\t]14:72167699]G\t40\tPASS\tEVDNC=ASSMB;INSERTION=TAGTGCTAAAATA;MAPQ=60;MATEID=704667:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_14_72152501_72177501_19C;SPAN=55032;SUBN=1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:21:10.7:40.4,0,10.7:14:0:-41.11:41.11\n14\t72167699\t704667:2\tA\tA[14:72112667[\t40\tPASS\tEVDNC=ASSMB;INSERTION=TAGTGCTAAAATA;MAPQ=60;MATEID=704667:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_14_72152501_72177501_19C;SPAN=55032;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:21:10.7:40.4,0,10.7:14:0:-41.11:41.11\n14\t72444798\t704776:1\tC\t]14:72444882]C\t99\tPASS\tDISC_MAPQ=255;EVDNC=TSI_G;INSERTION=CACCTGTTCAACCCTGGGGAGAAGACCCCAGGTTGGTGACCCCTGGTTTAGGACCA;MAPQ=60;MATEID=704776:2;MATENM=0;NM=0;NUMPARTS=3;SCTG=c_14_72422001_72447001_10C;SPAN=84;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:41:64:41.6:117.5,0,41.6:41:0:-119.2:119.2\n14\t72444882\t704776:2\tC\tC[14:72444798[\t99\tPASS\tDISC_MAPQ=255;EVDNC=TSI_G;INSERTION=CACCTGTTCAACCCTGGGGAGAAGACCCCAGGTTGGTGACCCCTGGTTTAGGACCA;MAPQ=60;MATEID=704776:1;MATENM=0;NM=0;NUMPARTS=3;SCTG=c_14_72422001_72447001_10C;SPAN=84;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:41:64:41.6:117.5,0,41.6:41:0:-119.2:119.2\n14\t72639639\t704857:1\tA\tA[14:72640358[\t46\tPASS\tEVDNC=ASSMB;HOMSEQ=CAGA;MAPQ=60;MATEID=704857:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_72618001_72643001_54C;SPAN=719;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:16:24:13.1:46.1,0,13.1:16:0:-46.99:46.99\n14\t72640358\t704857:2\tC\t]14:72639639]C\t46\tPASS\tEVDNC=ASSMB;HOMSEQ=CAGA;MAPQ=60;MATEID=704857:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_72618001_72643001_54C;SPAN=719;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:16:24:13.1:46.1,0,13.1:16:0:-46.99:46.99\n14\t76216190\t330018:2\tG\t[6:19764886[G\t92\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;INSERTION=G;MAPQ=60;MATEID=330018:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_19747001_19772001_3C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:31:14:8.4:92.4,8.4,0:28:15:-92.42:92.42\n14\t76531614\t706461:1\tG\tG[14:76532816[\t38\tPASS\tEVDNC=ASSMB;HOMSEQ=CAG;MAPQ=60;MATEID=706461:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_14_76513501_76538501_40C;SPAN=1202;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:26:25.7:38.9,0,25.7:14:0:-39.03:39.03\n14\t76532816\t706461:2\tC\t]14:76531614]C\t38\tPASS\tEVDNC=ASSMB;HOMSEQ=CAG;MAPQ=55;MATEID=706461:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_14_76513501_76538501_40C;SPAN=1202;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:26:25.7:38.9,0,25.7:14:0:-39.03:39.03\n14\t77757284\t707096:2\tA\t[14:44082765[A\t46\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=A;MAPQ=60;MATEID=707096:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_77738501_77763501_83C;SPAN=33674519;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:16:22:7.1:46.7,0,7.1:15:3:-48.1:48.1\n14\t77757579\t707094:2\tG\tG[11:66609733[\t20\tPASS\tDISC_MAPQ=56;EVDNC=DSCRD;IMPRECISE;MAPQ=56;MATEID=707094:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=11:66609733(-)-14:77757579(+)__14_77738501_77763501D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:20:20.9:20.9,0,27.5:0:8:-20.79:20.87\n14\t81002783\t708144:1\tT\tT[14:81003084[\t0\tPASS\tEVDNC=ASSMB;HOMSEQ=CTAATGCCTCTT;MAPQ=60;MATEID=708144:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_80997001_81022001_41C;SPAN=301;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/0:16:341:42.8:0,42.8,944:16:0:43.04:25.33\n14\t81003084\t708144:2\tC\t]14:81002783]C\t0\tPASS\tEVDNC=ASSMB;HOMSEQ=CTAATGCCTCTT;MAPQ=60;MATEID=708144:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_80997001_81022001_41C;SPAN=301;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/0:16:341:42.8:0,42.8,944:16:0:43.04:25.33\n14\t81320430\t592458:2\tA\t]11:62074341]A\t99\tPASS\tEVDNC=ASSMB;INSERTION=C;MAPQ=60;MATEID=592458:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_62058501_62083501_23C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:33:31:9:99,9,0:33:0:-99.02:99.02\n14\t81411867\t708297:1\tG\tG[14:81414269[\t69\tPASS\tEVDNC=ASSMB;INSERTION=CAGAGTTAAGATAAGCA;MAPQ=60;MATEID=708297:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_81413501_81438501_5C;SPAN=2402;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:23:18:6.3:69.3,6.3,0:23:0:-69.32:69.32\n14\t81414269\t708297:2\tG\t]14:81411867]G\t69\tPASS\tEVDNC=ASSMB;INSERTION=CAGAGTTAAGATAAGCA;MAPQ=60;MATEID=708297:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_81413501_81438501_5C;SPAN=2402;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:23:18:6.3:69.3,6.3,0:23:0:-69.32:69.32\n14\t81668843\t708414:1\tC\t]14:81762140]C\t18\tPASS\tEVDNC=ASSMB;HOMSEQ=CC;MAPQ=60;MATEID=708414:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_81756501_81781501_108C;SPAN=93297;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:27:18.8:18.8,0,48.5:8:0:-18.82:19.57\n14\t81762140\t708414:2\tC\tC[14:81668843[\t18\tPASS\tEVDNC=ASSMB;HOMSEQ=CC;MAPQ=60;MATEID=708414:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_81756501_81781501_108C;SPAN=93297;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:27:18.8:18.8,0,48.5:8:0:-18.82:19.57\n14\t81817963\t708444:1\tT\t]14:81818083]T\t36\tPASS\tEVDNC=ASSMB;INSERTION=CCTTCCTTTCT;MAPQ=22;MATEID=708444:2;MATENM=7;NM=4;NUMPARTS=2;SCTG=c_14_81805501_81830501_94C;SPAN=120;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:15:46:36.8:36.8,0,76.4:15:0:-36.59:37.45\n14\t81818083\t708444:2\tT\tT[14:81817963[\t36\tPASS\tEVDNC=ASSMB;INSERTION=CCTTCCTTTCT;MAPQ=60;MATEID=708444:1;MATENM=4;NM=7;NUMPARTS=2;SCTG=c_14_81805501_81830501_94C;SPAN=120;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:15:46:36.8:36.8,0,76.4:15:0:-36.59:37.45\n14\t81939555\t708465:1\tG\t]14:81942886]G\t17\tPASS\tEVDNC=ASSMB;INSERTION=CCAA;MAPQ=60;MATEID=708465:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_81928001_81953001_22C;SPAN=3331;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:45:17:17,0,96.2:9:0:-17.06:20.24\n14\t81942886\t708465:2\tA\tA[14:81939555[\t17\tPASS\tEVDNC=ASSMB;INSERTION=CCAA;MAPQ=60;MATEID=708465:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_81928001_81953001_22C;SPAN=3331;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:45:17:17,0,96.2:9:0:-17.06:20.24\n14\t82032766\t708490:1\tT\tT[14:82036987[\t22\tPASS\tEVDNC=ASSMB;INSERTION=AACATAAATC;MAPQ=60;MATEID=708490:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_82026001_82051001_54C;SPAN=4221;SUBN=5;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:27:22.1:22.1,0,45.2:9:0:-22.12:22.58\n14\t82036987\t708490:2\tA\t]14:82032766]A\t22\tPASS\tEVDNC=ASSMB;INSERTION=AACATAAATC;MAPQ=60;MATEID=708490:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_82026001_82051001_54C;SPAN=4221;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:27:22.1:22.1,0,45.2:9:0:-22.12:22.58\n14\t83169509\t708910:1\tT\tT[14:83170140[\t50\tPASS\tEVDNC=ASSMB;HOMSEQ=TCCAAAGACCTTTATTT;MAPQ=60;MATEID=708910:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_14_83153001_83178001_88C;SPAN=631;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:19:43:50.6:50.6,0,57.2:19:0:-50.63:50.66\n14\t83170140\t708910:2\tT\t]14:83169509]T\t50\tPASS\tEVDNC=ASSMB;HOMSEQ=TCCAAAGACCTTTATTT;MAPQ=60;MATEID=708910:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_14_83153001_83178001_88C;SPAN=631;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:19:43:50.6:50.6,0,57.2:19:0:-50.63:50.66\n14\t83385696\t708989:1\tA\tA[14:83386020[\t42\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=708989:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_83373501_83398501_6C;SPAN=324;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:15:24:16.4:42.8,0,16.4:15:0:-43.34:43.34\n14\t83386020\t708989:2\tC\t]14:83385696]C\t42\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=708989:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_83373501_83398501_6C;SPAN=324;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:15:24:16.4:42.8,0,16.4:15:0:-43.34:43.34\n14\t83666619\t709085:1\tT\t]14:83678044]T\t48\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=T;MAPQ=60;MATEID=709085:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_83643001_83668001_20C;SPAN=11425;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:17:28:21.8:48.2,0,21.8:12:14:-48.77:48.77\n14\t83678044\t709085:2\tT\tT[14:83666619[\t48\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=T;MAPQ=60;MATEID=709085:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_83643001_83668001_20C;SPAN=11425;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:17:28:21.8:48.2,0,21.8:12:14:-48.77:48.77\n14\t84012128\t709223:1\tC\t]14:84017566]C\t26\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=CA;MAPQ=60;MATEID=709223:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_84010501_84035501_3C;SPAN=5438;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:47:26.6:26.6,0,89.3:5:9:-26.4:28.44\n14\t84017566\t709223:2\tA\tA[14:84012128[\t26\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=CA;MAPQ=60;MATEID=709223:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_84010501_84035501_3C;SPAN=5438;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:47:26.6:26.6,0,89.3:5:9:-26.4:28.44\n14\t84672802\t709441:1\tA\tA[14:84673282[\t85\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=A;MAPQ=60;MATEID=709441:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_14_84672001_84697001_149C;SPAN=480;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:28:24:7.8:85.8,7.8,0:17:19:-85.82:85.82\n14\t84673282\t709441:2\tA\t]14:84672802]A\t85\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=A;MAPQ=60;MATEID=709441:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_14_84672001_84697001_149C;SPAN=480;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:28:24:7.8:85.8,7.8,0:17:19:-85.82:85.82\n14\t84860828\t709538:1\tG\t]14:84867210]G\t18\tPASS\tEVDNC=ASSMB;INSERTION=G;MAPQ=60;MATEID=709538:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_84843501_84868501_49C;SPAN=6382;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:41:18.2:18.2,0,84.2:9:0:-18.18:20.65\n14\t84867210\t709538:2\tA\tA[14:84860828[\t18\tPASS\tEVDNC=ASSMB;INSERTION=G;MAPQ=60;MATEID=709538:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_84843501_84868501_49C;SPAN=6382;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:41:18.2:18.2,0,84.2:9:0:-18.18:20.65\n14\t84948633\t709567:1\tA\t]14:84948843]A\t21\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=709567:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_84941501_84966501_40C;SPAN=210;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:53:21.5:21.5,0,110.6:11:0:-21.41:24.93\n14\t84948843\t709567:2\tA\tA[14:84948633[\t21\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=709567:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_84941501_84966501_40C;SPAN=210;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:53:21.5:21.5,0,110.6:11:0:-21.41:24.93\n14\t86616493\t710249:1\tA\t]14:86637764]A\t35\tPASS\tEVDNC=ASSMB;HOMSEQ=AGGG;MAPQ=60;MATEID=710249:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_86632001_86657001_52C;SPAN=21271;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:26:29:35.6,0,29:13:0:-35.63:35.63\n14\t86637764\t710249:2\tG\tG[14:86616493[\t35\tPASS\tEVDNC=ASSMB;HOMSEQ=AGGG;MAPQ=60;MATEID=710249:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_86632001_86657001_52C;SPAN=21271;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:26:29:35.6,0,29:13:0:-35.63:35.63\n14\t87380711\t710517:1\tA\t]14:87382035]A\t42\tPASS\tEVDNC=ASSMB;HOMSEQ=A;MAPQ=60;MATEID=710517:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_87367001_87392001_6C;SPAN=1324;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:18:59:42.8:42.8,0,105.5:18:0:-42.83:44.31\n14\t87382035\t710517:2\tA\tA[14:87380711[\t42\tPASS\tEVDNC=ASSMB;HOMSEQ=A;MAPQ=60;MATEID=710517:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_87367001_87392001_6C;SPAN=1324;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:18:59:42.8:42.8,0,105.5:18:0:-42.83:44.31\n14\t87391720\t710518:1\tT\tT[14:87392040[\t99\tPASS\tEVDNC=ASSMB;HOMSEQ=AAAATCGT;MAPQ=60;MATEID=710518:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_87367001_87392001_8C;SPAN=320;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:35:23:9.6:105.6,9.6,0:35:0:-105.6:105.6\n14\t87392040\t710518:2\tA\t]14:87391720]A\t99\tPASS\tEVDNC=ASSMB;HOMSEQ=AAAATCGT;MAPQ=60;MATEID=710518:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_87367001_87392001_8C;SPAN=320;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:35:23:9.6:105.6,9.6,0:35:0:-105.6:105.6\n14\t88942494\t711024:1\tC\tC[14:88942735[\t79\tPASS\tEVDNC=ASSMB;HOMSEQ=CCAAAAGCTC;MAPQ=60;MATEID=711024:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_14_88935001_88960001_17C;SPAN=241;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:27:34:3.8:79.7,0,3.8:27:0:-83.31:83.31\n14\t88942735\t711024:2\tC\t]14:88942494]C\t79\tPASS\tEVDNC=ASSMB;HOMSEQ=CCAAAAGCTC;MAPQ=60;MATEID=711024:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_14_88935001_88960001_17C;SPAN=241;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:27:34:3.8:79.7,0,3.8:27:0:-83.31:83.31\n14\t96428716\t714013:1\tA\t]14:96515169]A\t61\tPASS\tDISC_MAPQ=44;EVDNC=ASDIS;INSERTION=TTAATTTTTTAATTTTAAATGATTTAATTTTAA;MAPQ=60;MATEID=714013:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_96505501_96530501_12C;SPAN=86453;SUBN=4;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:21:27:5.6:61.7,0,5.6:19:9:-64.38:64.38\n14\t96515169\t714013:2\tT\tT[14:96428716[\t61\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;INSERTION=TTAATTTTTTAATTTTAAATGATTTAATTTTAA;MAPQ=60;MATEID=714013:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_96505501_96530501_12C;SPAN=86453;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:21:27:5.6:61.7,0,5.6:19:9:-64.38:64.38\n14\t98308198\t714618:1\tG\tG[14:98308510[\t47\tPASS\tEVDNC=ASSMB;HOMSEQ=AAAAAAAAGGAGGAGGGAG;MAPQ=60;MATEID=714618:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_14_98294001_98319001_62C;SPAN=312;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:19:55:47.3:47.3,0,90.2:19:0:-47.26:48.03\n14\t98308510\t714618:2\tA\t]14:98308198]A\t47\tPASS\tEVDNC=ASSMB;HOMSEQ=AAAAAAAAGGAGGAGGGAG;MAPQ=60;MATEID=714618:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_14_98294001_98319001_62C;SPAN=312;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:19:55:47.3:47.3,0,90.2:19:0:-47.26:48.03\n14\t98317666\t714629:1\tT\tT[14:98318751[\t41\tPASS\tEVDNC=ASSMB;HOMSEQ=ATTATGAATTGAAAGATTTTTTT;MAPQ=60;MATEID=714629:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_98318501_98343501_158C;SPAN=1085;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:18:1.7:41.3,0,1.7:14:0:-42.92:42.92\n14\t98318751\t714629:2\tA\t]14:98317666]A\t41\tPASS\tEVDNC=ASSMB;HOMSEQ=ATTATGAATTGAAAGATTTTTTT;MAPQ=60;MATEID=714629:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_98318501_98343501_158C;SPAN=1085;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:18:1.7:41.3,0,1.7:14:0:-42.92:42.92\n14\t101524539\t715689:1\tA\tA[14:101524866[\t24\tPASS\tEVDNC=ASSMB;HOMSEQ=TTTGCCATTA;MAPQ=60;MATEID=715689:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_101503501_101528501_21C;SPAN=327;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:20:24.2:24.2,0,24.2:9:0:-24.09:24.09\n14\t101524866\t715689:2\tT\t]14:101524539]T\t24\tPASS\tEVDNC=ASSMB;HOMSEQ=TTTGCCATTA;MAPQ=60;MATEID=715689:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_101503501_101528501_21C;SPAN=327;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:20:24.2:24.2,0,24.2:9:0:-24.09:24.09\n14\t101998996\t715900:1\tC\t]14:102036556]C\t51\tPASS\tEVDNC=ASSMB;INSERTION=TATAGTCCCAGA;MAPQ=60;MATEID=715900:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_102018001_102043001_94C;SPAN=37560;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:18:28:18.5:51.5,0,18.5:18:0:-52.37:52.37\n14\t102036556\t715900:2\tA\tA[14:101998996[\t51\tPASS\tEVDNC=ASSMB;INSERTION=TATAGTCCCAGA;MAPQ=60;MATEID=715900:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_102018001_102043001_94C;SPAN=37560;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:18:28:18.5:51.5,0,18.5:18:0:-52.37:52.37\n14\t103842390\t716565:2\tC\t[11:66496959[C\t34\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=GGAGG;MAPQ=60;MATEID=716565:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_103831001_103856001_0C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:20:14.3:34.1,0,14.3:10:5:-34.32:34.32\n14\t103896552\t716586:1\tA\t]14:103896896]A\t4\tPASS\tDISC_MAPQ=49;EVDNC=DSCRD;IMPRECISE;MAPQ=49;MATEID=716586:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=14:103896552(-)-14:103896896(+)__14_103880001_103905001D;SPAN=344;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:78:4.7:4.7,0,189.5:0:8:-4.483:15.47\n14\t103896896\t716586:2\tC\tC[14:103896552[\t4\tPASS\tDISC_MAPQ=27;EVDNC=DSCRD;IMPRECISE;MAPQ=27;MATEID=716586:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=14:103896552(-)-14:103896896(+)__14_103880001_103905001D;SPAN=344;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:78:4.7:4.7,0,189.5:0:8:-4.483:15.47\n14\t103910481\t716602:2\tG\tG]11:66501326]\t33\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=G;MAPQ=60;MATEID=716602:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_103904501_103929501_1C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:21:17.3:33.8,0,17.3:8:6:-33.92:33.92\n14\t104206456\t716693:2\tG\t]2:237623393]G\t33\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=716693:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_14_104198501_104223501_154C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:22:20.3:33.5,0,20.3:12:0:-33.55:33.55\n14\t104950889\t717030:1\tG\tG[14:104951841[\t29\tPASS\tDISC_MAPQ=34;EVDNC=DSCRD;IMPRECISE;MAPQ=34;MATEID=717030:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=14:104950889(+)-14:104951841(-)__14_104933501_104958501D;SPAN=952;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:37:29.3:29.3,0,62.3:0:12:-29.21:29.92\n14\t104951841\t717030:2\tC\t]14:104950889]C\t29\tPASS\tDISC_MAPQ=37;EVDNC=DSCRD;IMPRECISE;MAPQ=37;MATEID=717030:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=14:104950889(+)-14:104951841(-)__14_104933501_104958501D;SPAN=952;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:37:29.3:29.3,0,62.3:0:12:-29.21:29.92\n14\t105162463\t717131:1\tC\t]14:105162670]C\t29\tPASS\tEVDNC=ASSMB;HOMSEQ=CCAGGGCACCTTAAAGCCCAGG;MAPQ=60;MATEID=717131:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_14_105154001_105179001_66C;SPAN=207;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:16:85:29:29,0,184.1:16:0:-28.92:35.5\n14\t105162670\t717131:2\tG\tG[14:105162463[\t29\tPASS\tEVDNC=ASSMB;HOMSEQ=CCAGGGCACCTTAAAGCCCAGG;MAPQ=60;MATEID=717131:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_14_105154001_105179001_66C;SPAN=207;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:16:85:29:29,0,184.1:16:0:-28.92:35.5\n14\t105573461\t717396:1\tC\tC[14:105693709[\t52\tPASS\tDISC_MAPQ=40;EVDNC=DSCRD;IMPRECISE;MAPQ=40;MATEID=717396:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=14:105573461(+)-14:105693709(-)__14_105693001_105718001D;SPAN=120248;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:18:14:4.8:52.8,4.8,0:0:18:-52.81:52.81\n14\t105623442\t717296:1\tC\tC[14:105642051[\t5\tPASS\tDISC_MAPQ=42;EVDNC=DSCRD;IMPRECISE;MAPQ=42;MATEID=717296:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=14:105623442(+)-14:105642051(-)__14_105619501_105644501D;SPAN=18609;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:99:5.3:5.3,0,242.9:0:10:-5.182:19.27\n14\t105642051\t717296:2\tT\t]14:105623442]T\t5\tPASS\tDISC_MAPQ=19;EVDNC=DSCRD;IMPRECISE;MAPQ=19;MATEID=717296:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=14:105623442(+)-14:105642051(-)__14_105619501_105644501D;SPAN=18609;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:99:5.3:5.3,0,242.9:0:10:-5.182:19.27\n14\t105646374\t717325:1\tT\t]14:105646476]T\t26\tPASS\tDISC_MAPQ=255;EVDNC=TSI_L;HOMSEQ=TGCCTCCCACCGGCCCTGCTCACCTGTGGCTGC;MAPQ=11;MATEID=717325:2;MATENM=1;NM=3;NUMPARTS=3;REPSEQ=CC;SCTG=c_14_105619501_105644501_306C;SPAN=102;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:9:0:2.4:26.4,2.4,0:9:0:-26.41:26.41\n14\t105646476\t717325:2\tC\tC[14:105646374[\t26\tPASS\tDISC_MAPQ=255;EVDNC=TSI_L;HOMSEQ=TGCCTCCCACCGGCCCTGCTCACCTGTGGCTGC;MAPQ=60;MATEID=717325:1;MATENM=3;NM=1;NUMPARTS=3;REPSEQ=CC;SCTG=c_14_105619501_105644501_306C;SPAN=102;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:9:0:2.4:26.4,2.4,0:9:0:-26.41:26.41\n14\t105693709\t717396:2\tA\t]14:105573461]A\t52\tPASS\tDISC_MAPQ=53;EVDNC=DSCRD;IMPRECISE;MAPQ=53;MATEID=717396:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=14:105573461(+)-14:105693709(-)__14_105693001_105718001D;SPAN=120248;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:18:14:4.8:52.8,4.8,0:0:18:-52.81:52.81\n14\t106249864\t717675:2\tC\t]4:148637296]C\t18\tPASS\tEVDNC=ASSMB;HOMSEQ=C;MAPQ=60;MATEID=717675:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_106232001_106257001_8C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:39:18.8:18.8,0,78.2:9:0:-18.75:20.87\n14\t106300357\t717708:1\tT\tT[14:106300677[\t83\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=CGAATTTTTCATTTCTTTT;MAPQ=60;MATEID=717708:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_106281001_106306001_124C;SPAN=320;SUBN=2;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:30:54:50.9:83.9,0,50.9:24:6:-84.25:84.25\n14\t106300677\t717708:2\tC\t]14:106300357]C\t83\tPASS\tDISC_MAPQ=58;EVDNC=ASDIS;HOMSEQ=CGAATTTTTCATTTCTTTT;MAPQ=41;MATEID=717708:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_106281001_106306001_124C;SPAN=320;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:30:54:50.9:83.9,0,50.9:24:6:-84.25:84.25\n14\t106727963\t718064:1\tA\tA[14:106775262[\t99\tPASS\tEVDNC=ASSMB;HOMSEQ=ACAGA;MAPQ=60;MATEID=718064:2;MATENM=0;NM=4;NUMPARTS=2;SCTG=c_14_106771001_106796001_94C;SPAN=47299;SUBN=5;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:36:25:9.9:108.9,9.9,0:36:0:-108.9:108.9\n14\t106775262\t718064:2\tA\t]14:106727963]A\t99\tPASS\tEVDNC=ASSMB;HOMSEQ=ACAGA;MAPQ=60;MATEID=718064:1;MATENM=4;NM=0;NUMPARTS=2;SCTG=c_14_106771001_106796001_94C;SPAN=47299;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:36:25:9.9:108.9,9.9,0:36:0:-108.9:108.9\n15\t17009488\t718140:1\tA\t]15:17481101]A\t26\tPASS\tDISC_MAPQ=49;EVDNC=DSCRD;IMPRECISE;MAPQ=49;MATEID=718140:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=15:17009488(-)-15:17481101(+)__15_17003001_17028001D;SPAN=471613;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:35:26.6:26.6,0,59.6:0:11:-26.47:27.25\n15\t17090500\t718529:1\tT\t]15:17093747]T\t99\tPASS\tDISC_MAPQ=23;EVDNC=ASDIS;HOMSEQ=TAAAAACTACGCAGA;MAPQ=60;MATEID=718529:2;MATENM=10;NM=1;NUMPARTS=2;SCTG=c_15_17076501_17101501_143C;SPAN=3247;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:79:33:21.9:240.9,21.9,0:64:15:-241:241\n15\t17090542\t718583:1\tT\t]15:17103384]T\t21\tPASS\tDISC_MAPQ=32;EVDNC=DSCRD;IMPRECISE;MAPQ=32;MATEID=718583:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=15:17090542(-)-15:17103384(+)__15_17101001_17126001D;SPAN=12842;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:42:21.2:21.2,0,83.9:0:10:-21.2:23.34\n15\t17093747\t718540:1\tA\tA[15:17163323[\t99\tPASS\tDISC_MAPQ=9;EVDNC=ASDIS;HOMSEQ=TAAAAACTACGCAGA;MAPQ=32;MATEID=718540:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_15_17076501_17101501_72C;SPAN=69576;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:67:14:18.6:204.6,18.6,0:59:8:-204.7:204.7\n15\t17093747\t718529:2\tA\tA[15:17090500[\t99\tPASS\tDISC_MAPQ=7;EVDNC=ASDIS;HOMSEQ=TAAAAACTACGCAGA;MAPQ=30;MATEID=718529:1;MATENM=1;NM=10;NUMPARTS=2;SCTG=c_15_17076501_17101501_143C;SPAN=3247;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:79:33:21.9:240.9,21.9,0:64:15:-241:241\n15\t17103384\t718583:2\tC\tC[15:17090542[\t21\tPASS\tDISC_MAPQ=27;EVDNC=DSCRD;IMPRECISE;MAPQ=27;MATEID=718583:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=15:17090542(-)-15:17103384(+)__15_17101001_17126001D;SPAN=12842;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:42:21.2:21.2,0,83.9:0:10:-21.2:23.34\n15\t17103407\t718596:1\tA\tA[15:17163364[\t18\tPASS\tDISC_MAPQ=35;EVDNC=DSCRD;IMPRECISE;MAPQ=35;MATEID=718596:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=15:17103407(+)-15:17163364(-)__15_17101001_17126001D;SPAN=59957;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:27:18.8:18.8,0,48.5:0:8:-18.82:19.57\n15\t17103493\t718685:1\tT\tT[15:17494314[\t49\tPASS\tDISC_MAPQ=53;EVDNC=DSCRD;IMPRECISE;MAPQ=53;MATEID=718685:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=15:17103493(+)-15:17494314(-)__15_17493001_17518001D;SPAN=390821;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:17:9:4.5:49.5,4.5,0:0:17:-49.51:49.51\n15\t17163323\t718540:2\tT\t]15:17093747]T\t99\tPASS\tDISC_MAPQ=14;EVDNC=ASDIS;HOMSEQ=TAAAAACTACGCAGA;MAPQ=54;MATEID=718540:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_15_17076501_17101501_72C;SPAN=69576;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:67:14:18.6:204.6,18.6,0:59:8:-204.7:204.7\n15\t17163364\t718596:2\tA\t]15:17103407]A\t18\tPASS\tDISC_MAPQ=18;EVDNC=DSCRD;IMPRECISE;MAPQ=18;MATEID=718596:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=15:17103407(+)-15:17163364(-)__15_17101001_17126001D;SPAN=59957;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:27:18.8:18.8,0,48.5:0:8:-18.82:19.57\n15\t17481101\t718140:2\tT\tT[15:17009488[\t26\tPASS\tDISC_MAPQ=36;EVDNC=DSCRD;IMPRECISE;MAPQ=36;MATEID=718140:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=15:17009488(-)-15:17481101(+)__15_17003001_17028001D;SPAN=471613;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:35:26.6:26.6,0,59.6:0:11:-26.47:27.25\n15\t17494314\t718685:2\tG\t]15:17103493]G\t49\tPASS\tDISC_MAPQ=15;EVDNC=DSCRD;IMPRECISE;MAPQ=15;MATEID=718685:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=15:17103493(+)-15:17494314(-)__15_17493001_17518001D;SPAN=390821;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:17:9:4.5:49.5,4.5,0:0:17:-49.51:49.51\n15\t18358071\t718981:1\tT\t]15:19563836]T\t0\tPASS\tDISC_MAPQ=26;EVDNC=DSCRD;IMPRECISE;MAPQ=26;MATEID=718981:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=15:18358071(-)-15:19563836(+)__15_19551001_19576001D;SPAN=1205765;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/0:13:214:16.9:0,16.9,571:0:13:17.24:22.07\n15\t19563836\t718981:2\tA\tA[15:18358071[\t0\tPASS\tDISC_MAPQ=24;EVDNC=DSCRD;IMPRECISE;MAPQ=24;MATEID=718981:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=15:18358071(-)-15:19563836(+)__15_19551001_19576001D;SPAN=1205765;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/0:13:214:16.9:0,16.9,571:0:13:17.24:22.07\n15\t20340255\t719837:1\tG\t]15:20342236]G\t15\tPASS\tEVDNC=ASSMB;HOMSEQ=GCCAAGCCAGCCAGCCAGCCAAGCCAGCCAAGCCAGC;MAPQ=60;MATEID=719837:2;MATENM=2;NM=1;NUMPARTS=2;SCTG=c_15_20335001_20360001_235C;SPAN=1981;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:20:181:15.1:15.1,0,440.9:20:0:-15.14:39.36\n15\t20340976\t719853:1\tG\t]15:20342557]G\t0\tPASS\tEVDNC=ASSMB;HOMSEQ=GCCAGCCAAGCCAGCC;MAPQ=60;MATEID=719853:2;MATENM=2;NM=3;NUMPARTS=2;SCTG=c_15_20335001_20360001_516C;SPAN=1581;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/0:10:293:49.1:0,49.1,835.1:10:0:49.35:14.43\n15\t20342236\t719837:2\tC\tC[15:20340255[\t15\tPASS\tEVDNC=ASSMB;HOMSEQ=GCCAAGCCAGCCAGCCAGCCAAGCCAGCCAAGCCAGC;MAPQ=60;MATEID=719837:1;MATENM=1;NM=2;NUMPARTS=2;SCTG=c_15_20335001_20360001_235C;SPAN=1981;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:20:181:15.1:15.1,0,440.9:20:0:-15.14:39.36\n15\t20342557\t719853:2\tC\tC[15:20340976[\t0\tPASS\tEVDNC=ASSMB;HOMSEQ=GCCAGCCAAGCCAGCC;MAPQ=60;MATEID=719853:1;MATENM=3;NM=2;NUMPARTS=2;SCTG=c_15_20335001_20360001_516C;SPAN=1581;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/0:10:293:49.1:0,49.1,835.1:10:0:49.35:14.43\n15\t20376251\t719952:1\tG\tG[15:20384361[\t83\tPASS\tDISC_MAPQ=52;EVDNC=ASDIS;HOMSEQ=AATACTATGCAGCCATAAGAAAGGATGAGTTCATGTCCTTTG;MAPQ=58;MATEID=719952:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_15_20359501_20384501_234C;SPAN=8110;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:33:89:83.9:83.9,0,140:19:15:-83.92:84.69\n15\t20384361\t719952:2\tA\t]15:20376251]A\t83\tPASS\tDISC_MAPQ=39;EVDNC=ASDIS;HOMSEQ=AATACTATGCAGCCATAAGAAAGGATGAGTTCATGTCCTTTG;MAPQ=41;MATEID=719952:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_15_20359501_20384501_234C;SPAN=8110;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:33:89:83.9:83.9,0,140:19:15:-83.92:84.69\n15\t23961921\t721360:1\tC\tC[15:23962220[\t39\tPASS\tEVDNC=ASSMB;HOMSEQ=AAAATTACTCC;MAPQ=60;MATEID=721360:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_15_23961001_23986001_113C;SPAN=299;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:12:13:3.6:39.6,3.6,0:12:0:-39.28:39.28\n15\t23962220\t721360:2\tA\t]15:23961921]A\t39\tPASS\tEVDNC=ASSMB;HOMSEQ=AAAATTACTCC;MAPQ=60;MATEID=721360:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_15_23961001_23986001_113C;SPAN=299;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:12:13:3.6:39.6,3.6,0:12:0:-39.28:39.28\n15\t25686249\t722044:1\tG\tG[15:25687234[\t35\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;MAPQ=60;MATEID=722044:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_15_25676001_25701001_104C;SPAN=985;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:27:32:35.3,0,32:8:10:-35.33:35.33\n15\t25687234\t722044:2\tG\t]15:25686249]G\t35\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;MAPQ=60;MATEID=722044:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_15_25676001_25701001_104C;SPAN=985;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:27:32:35.3,0,32:8:10:-35.33:35.33\n15\t29700693\t723297:2\tA\t[9:117377297[A\t39\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=723297:1;MATENM=0;NM=0;NUMPARTS=3;SCTG=c_15_29694001_29719001_68C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:13:13:3.6:39.6,3.6,0:6:8:-39.61:39.61\n15\t30173126\t723413:2\tG\t]1:202625106]G\t31\tPASS\tDISC_MAPQ=6;EVDNC=TSI_L;HOMSEQ=GTGTGTGG;INSERTION=TGTTGTGTGTGGCCTGTAATAGG;MAPQ=60;MATEID=723413:1;MATENM=1;NM=0;NUMPARTS=3;REPSEQ=GTGTGTGT;SCTG=c_15_30159501_30184501_42C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:20:33:11:31,0,11:10:10:-31.29:31.29\n15\t31950557\t723963:1\tT\t]15:31956568]T\t26\tPASS\tEVDNC=ASSMB;HOMSEQ=TG;MAPQ=60;MATEID=723963:2;MATENM=0;NM=1;NUMPARTS=3;SCTG=c_15_31948001_31973001_63C;SPAN=6011;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:34:26.9:26.9,0,56.6:11:0:-26.75:27.42\n15\t31956568\t723963:2\tG\tG[15:31950557[\t26\tPASS\tEVDNC=ASSMB;HOMSEQ=TG;MAPQ=60;MATEID=723963:1;MATENM=1;NM=0;NUMPARTS=3;SCTG=c_15_31948001_31973001_63C;SPAN=6011;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:34:26.9:26.9,0,56.6:11:0:-26.75:27.42\n15\t31999032\t723972:1\tT\tT[15:31999326[\t42\tPASS\tEVDNC=ASSMB;HOMSEQ=CAGCTCGTGGTTTTT;MAPQ=60;MATEID=723972:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_15_31997001_32022001_54C;SPAN=294;SUBN=2;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:14:17:1.2:42.9,1.2,0:14:0:-43.71:43.71\n15\t31999326\t723972:2\tC\t]15:31999032]C\t42\tPASS\tEVDNC=ASSMB;HOMSEQ=CAGCTCGTGGTTTTT;MAPQ=60;MATEID=723972:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_15_31997001_32022001_54C;SPAN=294;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:14:17:1.2:42.9,1.2,0:14:0:-43.71:43.71\n15\t34449542\t724964:1\tA\tA[15:34449833[\t23\tPASS\tDISC_MAPQ=58;EVDNC=ASDIS;INSERTION=TTGGAAGCTA;MAPQ=60;MATEID=724964:2;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_15_34447001_34472001_8C;SPAN=291;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:8:5:2.1:23.1,2.1,0:5:4:-23.11:23.11\n15\t34449833\t724964:2\tA\t]15:34449542]A\t23\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;INSERTION=TTGGAAGCTA;MAPQ=60;MATEID=724964:1;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_15_34447001_34472001_8C;SPAN=291;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:8:5:2.1:23.1,2.1,0:5:4:-23.11:23.11\n15\t34716832\t725053:1\tT\tT[15:34717151[\t52\tPASS\tEVDNC=ASSMB;HOMSEQ=CCAAGCAGTGGCTTTCT;MAPQ=60;MATEID=725053:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_15_34716501_34741501_34C;SPAN=319;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:18:24:6.5:52.7,0,6.5:18:0:-54.59:54.59\n15\t34717151\t725053:2\tC\t]15:34716832]C\t52\tPASS\tEVDNC=ASSMB;HOMSEQ=CCAAGCAGTGGCTTTCT;MAPQ=60;MATEID=725053:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_15_34716501_34741501_34C;SPAN=319;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:18:24:6.5:52.7,0,6.5:18:0:-54.59:54.59\n15\t38974815\t726371:1\tT\tT[15:38975158[\t72\tPASS\tEVDNC=ASSMB;HOMSEQ=GAAAAATTTATT;MAPQ=60;MATEID=726371:2;MATENM=3;NM=1;NUMPARTS=2;SCTG=c_15_38955001_38980001_114C;SPAN=343;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:24:23:6.6:72.6,6.6,0:24:0:-72.62:72.62\n15\t38975158\t726371:2\tG\t]15:38974815]G\t72\tPASS\tEVDNC=ASSMB;HOMSEQ=GAAAAATTTATT;MAPQ=60;MATEID=726371:1;MATENM=1;NM=3;NUMPARTS=2;SCTG=c_15_38955001_38980001_114C;SPAN=343;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:24:23:6.6:72.6,6.6,0:24:0:-72.62:72.62\n15\t39080194\t726424:1\tA\tA[15:39081260[\t39\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGATTACAGGCA;MAPQ=60;MATEID=726424:2;MATENM=9;NM=1;NUMPARTS=2;SCTG=c_15_39077501_39102501_79C;SPAN=1066;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:13:12:3.6:39.6,3.6,0:7:7:-39.61:39.61\n15\t39081260\t726424:2\tT\t]15:39080194]T\t39\tPASS\tDISC_MAPQ=40;EVDNC=ASDIS;HOMSEQ=TTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGATTACAGGCA;MAPQ=60;MATEID=726424:1;MATENM=1;NM=9;NUMPARTS=2;SCTG=c_15_39077501_39102501_79C;SPAN=1066;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:13:12:3.6:39.6,3.6,0:7:7:-39.61:39.61\n15\t39452190\t726529:1\tA\tA[15:39452659[\t89\tPASS\tEVDNC=ASSMB;HOMSEQ=A;MAPQ=60;MATEID=726529:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_15_39445001_39470001_11C;SPAN=469;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:29:28:8.1:89.1,8.1,0:29:0:-89.12:89.12\n15\t39452659\t726529:2\tA\t]15:39452190]A\t89\tPASS\tEVDNC=ASSMB;HOMSEQ=A;MAPQ=60;MATEID=726529:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_15_39445001_39470001_11C;SPAN=469;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:29:28:8.1:89.1,8.1,0:29:0:-89.12:89.12\n15\t39702424\t629585:2\tA\t]12:56596312]A\t85\tPASS\tEVDNC=ASSMB;INSERTION=AGCTAGGTGGATTTTCTCTTC;MAPQ=60;MATEID=629585:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_56595001_56620001_2C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:28:14:7.8:85.8,7.8,0:28:0:-85.82:85.82\n15\t40561981\t726817:2\tT\t[7:26201745[T\t24\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;MAPQ=60;MATEID=726817:1;MATENM=0;NM=0;NUMPARTS=3;SCTG=c_15_40547501_40572501_61C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:19:21.2:24.5,0,21.2:8:2:-24.37:24.37\n15\t40561991\t384129:2\tT\tT]7:26213338]\t30\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;INSERTION=ATATTTTTTTTTTAAAGAAATATAT;MAPQ=60;MATEID=384129:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_7_26190501_26215501_0C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:44:30.5:30.5,0,80:11:5:-30.55:31.78\n15\t43844862\t727594:1\tA\tA[15:43846655[\t46\tPASS\tEVDNC=ASSMB;HOMSEQ=GGA;MAPQ=60;MATEID=727594:2;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_15_43830501_43855501_14C;SPAN=1793;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:14:15:4.2:46.2,4.2,0:14:0:-46.19:46.19\n15\t43846655\t727594:2\tG\t]15:43844862]G\t46\tPASS\tEVDNC=ASSMB;HOMSEQ=GGA;MAPQ=60;MATEID=727594:1;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_15_43830501_43855501_14C;SPAN=1793;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:14:15:4.2:46.2,4.2,0:14:0:-46.19:46.19\n15\t44932069\t727843:1\tC\tC[15:44943043[\t56\tPASS\tDISC_MAPQ=50;EVDNC=ASDIS;MAPQ=60;MATEID=727843:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_15_44933001_44958001_10C;SPAN=10974;SUBN=1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:19:6:5.1:56.1,5.1,0:15:11:-56.11:56.11\n15\t44943043\t727843:2\tG\t]15:44932069]G\t56\tPASS\tDISC_MAPQ=5;EVDNC=ASDIS;MAPQ=18;MATEID=727843:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_15_44933001_44958001_10C;SPAN=10974;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:19:6:5.1:56.1,5.1,0:15:11:-56.11:56.11\n15\t45775782\t728113:1\tT\tT[15:45776117[\t56\tPASS\tEVDNC=ASSMB;HOMSEQ=CAGTACTCAGATTTCT;MAPQ=60;MATEID=728113:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_15_45766001_45791001_17C;SPAN=335;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:22:59:56:56,0,92.3:22:0:-56.04:56.53\n15\t45776117\t728113:2\tC\t]15:45775782]C\t56\tPASS\tEVDNC=ASSMB;HOMSEQ=CAGTACTCAGATTTCT;MAPQ=60;MATEID=728113:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_15_45766001_45791001_17C;SPAN=335;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:22:59:56:56,0,92.3:22:0:-56.04:56.53\n15\t46568509\t728314:1\tC\tC[15:46568971[\t31\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=728314:2;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_15_46550001_46575001_131C;SPAN=462;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:30:31.1:31.1,0,44.3:12:0:-31.18:31.31\n15\t46568971\t728314:2\tG\t]15:46568509]G\t31\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=728314:1;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_15_46550001_46575001_131C;SPAN=462;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:30:31.1:31.1,0,44.3:12:0:-31.18:31.31\n15\t48258079\t728721:1\tC\tC[15:48258385[\t66\tPASS\tEVDNC=ASSMB;HOMSEQ=AAGAGTGACCTTTAC;MAPQ=60;MATEID=728721:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_15_48240501_48265501_24C;SPAN=306;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:22:16:6:66,6,0:22:0:-66.02:66.02\n15\t48258385\t728721:2\tA\t]15:48258079]A\t66\tPASS\tEVDNC=ASSMB;HOMSEQ=AAGAGTGACCTTTAC;MAPQ=60;MATEID=728721:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_15_48240501_48265501_24C;SPAN=306;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:22:16:6:66,6,0:22:0:-66.02:66.02\n15\t51039721\t729920:1\tA\t]15:51222553]A\t39\tPASS\tDISC_MAPQ=255;EVDNC=ASDIS;HOMSEQ=AGCC;MAPQ=60;MATEID=729920:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_15_51205001_51230001_0C;SPAN=182832;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:16:48:39.5:39.5,0,79.1:13:10:-39.32:40.13\n15\t51060779\t729897:1\tT\t]15:51135960]T\t14\tPASS\tEVDNC=ASSMB;HOMSEQ=T;MAPQ=60;MATEID=729897:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_15_51131501_51156501_26C;SPAN=75181;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:53:14.9:14.9,0,117.2:9:0:-14.81:19.52\n15\t51135960\t729897:2\tT\tT[15:51060779[\t14\tPASS\tEVDNC=ASSMB;HOMSEQ=T;MAPQ=60;MATEID=729897:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_15_51131501_51156501_26C;SPAN=75181;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:53:14.9:14.9,0,117.2:9:0:-14.81:19.52\n15\t51222553\t729920:2\tC\tC[15:51039721[\t39\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AGCC;MAPQ=60;MATEID=729920:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_15_51205001_51230001_0C;SPAN=182832;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:16:48:39.5:39.5,0,79.1:13:10:-39.32:40.13\n15\t53117362\t730799:2\tT\tT]10:3040693]\t42\tPASS\tDISC_MAPQ=49;EVDNC=DSCRD;IMPRECISE;MAPQ=49;MATEID=730799:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=10:3040693(+)-15:53117362(+)__15_53116001_53141001D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:14:2:3.9:42.9,3.9,0:0:14:-42.91:42.91\n15\t54266895\t731383:1\tA\tA]15:54267497]\t32\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=731383:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=15:54266895(+)-15:54267497(+)__15_54243001_54268001D;SPAN=602;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:15:59:32.9:32.9,0,115.4:0:15:-32.93:35.51\n15\t54267497\t731383:2\tC\tC]15:54266895]\t32\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=731383:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=15:54266895(+)-15:54267497(+)__15_54243001_54268001D;SPAN=602;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:15:59:32.9:32.9,0,115.4:0:15:-32.93:35.51\n15\t54926147\t731620:1\tC\tC[15:54932265[\t59\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=731620:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=15:54926147(+)-15:54932265(-)__15_54904501_54929501D;SPAN=6118;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:20:5:5.4:59.4,5.4,0:0:20:-59.41:59.41\n15\t54932265\t731620:2\tC\t]15:54926147]C\t59\tPASS\tDISC_MAPQ=51;EVDNC=DSCRD;IMPRECISE;MAPQ=51;MATEID=731620:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=15:54926147(+)-15:54932265(-)__15_54904501_54929501D;SPAN=6118;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:20:5:5.4:59.4,5.4,0:0:20:-59.41:59.41\n15\t55137708\t731713:1\tT\tT[15:55138016[\t99\tPASS\tDISC_MAPQ=58;EVDNC=ASDIS;HOMSEQ=AAGAACTTGCTTTA;MAPQ=60;MATEID=731713:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_15_55125001_55150001_39C;SPAN=308;SUBN=1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:76:17:21:231,21,0:58:23:-231.1:231.1\n15\t55138016\t731713:2\tT\t]15:55137708]T\t99\tPASS\tDISC_MAPQ=50;EVDNC=ASDIS;HOMSEQ=AAGAACTTGCTTTA;MAPQ=60;MATEID=731713:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_15_55125001_55150001_39C;SPAN=308;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:76:17:21:231,21,0:58:23:-231.1:231.1\n15\t55307268\t731907:1\tT\t]15:55519627]T\t14\tPASS\tEVDNC=ASSMB;HOMSEQ=TCT;MAPQ=60;MATEID=731907:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_15_55517001_55542001_38C;SPAN=212359;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:7:30:14.6:14.6,0,60.8:7:0:-14.67:16.27\n15\t55363401\t731803:1\tA\tA[15:55364830[\t99\tPASS\tDISC_MAPQ=58;EVDNC=DSCRD;IMPRECISE;MAPQ=58;MATEID=731803:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=15:55363401(+)-15:55364830(-)__15_55345501_55370501D;SPAN=1429;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:45:17:12.6:138.6,12.6,0:0:45:-138.6:138.6\n15\t55364830\t731803:2\tA\t]15:55363401]A\t99\tPASS\tDISC_MAPQ=57;EVDNC=DSCRD;IMPRECISE;MAPQ=57;MATEID=731803:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=15:55363401(+)-15:55364830(-)__15_55345501_55370501D;SPAN=1429;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:45:17:12.6:138.6,12.6,0:0:45:-138.6:138.6\n15\t55519627\t731907:2\tT\tT[15:55307268[\t14\tPASS\tEVDNC=ASSMB;HOMSEQ=TCT;MAPQ=60;MATEID=731907:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_15_55517001_55542001_38C;SPAN=212359;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:7:30:14.6:14.6,0,60.8:7:0:-14.67:16.27\n15\t55959268\t732153:2\tT\t]6:9347213]T\t10\tPASS\tEVDNC=ASSMB;HOMSEQ=TTAG;MAPQ=60;MATEID=732153:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_15_55958001_55983001_95C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:7:44:10.7:10.7,0,99.8:7:0:-10.74:14.97\n15\t56758841\t732595:1\tT\tT[15:57242173[\t19\tPASS\tEVDNC=ASSMB;HOMSEQ=GT;MAPQ=60;MATEID=732595:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_15_57232001_57257001_7C;SPAN=483332;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:24:19.7:19.7,0,39.5:8:0:-19.66:20.07\n15\t56767901\t763324:1\tA\tA[16:35481713[\t29\tPASS\tEVDNC=ASSMB;HOMSEQ=A;MAPQ=60;MATEID=763324:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_16_35476001_35501001_13C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:13:2.9:29.3,0,2.9:10:0:-30.55:30.55\n15\t57242173\t732595:2\tG\t]15:56758841]G\t19\tPASS\tEVDNC=ASSMB;HOMSEQ=GT;MAPQ=60;MATEID=732595:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_15_57232001_57257001_7C;SPAN=483332;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:24:19.7:19.7,0,39.5:8:0:-19.66:20.07\n15\t58484217\t732918:1\tT\t]15:58485484]T\t24\tPASS\tEVDNC=ASSMB;HOMSEQ=TCA;MAPQ=60;MATEID=732918:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_15_58481501_58506501_52C;SPAN=1267;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:30:24.5:24.5,0,50.9:10:0:-24.58:25.08\n15\t58485484\t732918:2\tA\tA[15:58484217[\t24\tPASS\tEVDNC=ASSMB;HOMSEQ=TCA;MAPQ=60;MATEID=732918:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_15_58481501_58506501_52C;SPAN=1267;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:30:24.5:24.5,0,50.9:10:0:-24.58:25.08\n15\t62413896\t734250:1\tT\tT[15:62415594[\t33\tPASS\tEVDNC=ASSMB;HOMSEQ=ATT;MAPQ=60;MATEID=734250:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_15_62401501_62426501_7C;SPAN=1698;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:21:17.3:33.8,0,17.3:12:0:-33.92:33.92\n15\t62415594\t734250:2\tA\t]15:62413896]A\t33\tPASS\tEVDNC=ASSMB;HOMSEQ=ATT;MAPQ=60;MATEID=734250:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_15_62401501_62426501_7C;SPAN=1698;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:21:17.3:33.8,0,17.3:12:0:-33.92:33.92\n15\t62731836\t734367:2\tG\t[8:43588080[G\t49\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=CC;MAPQ=60;MATEID=734367:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_15_62720001_62745001_57C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:16:19:1.8:49.5,1.8,0:11:8:-50.34:50.34\n15\t63304215\t734738:1\tC\t]15:63530798]C\t15\tPASS\tEVDNC=ASSMB;HOMSEQ=CA;MAPQ=60;MATEID=734738:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_15_63528501_63553501_77C;SPAN=226583;SUBN=1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:7:27:15.5:15.5,0,51.8:7:0:-15.52:16.64\n15\t63530798\t734738:2\tA\tA[15:63304215[\t15\tPASS\tEVDNC=ASSMB;HOMSEQ=CA;MAPQ=60;MATEID=734738:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_15_63528501_63553501_77C;SPAN=226583;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:7:27:15.5:15.5,0,51.8:7:0:-15.52:16.64\n15\t66585336\t735943:1\tC\tC[15:66586077[\t85\tPASS\tEVDNC=ASSMB;HOMSEQ=TAGCTGGGATTACAGGCATGTGCCACC;MAPQ=60;MATEID=735943:2;MATENM=6;NM=1;NUMPARTS=2;SCTG=c_15_66566501_66591501_5C;SPAN=741;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:28:15:7.8:85.8,7.8,0:28:0:-85.82:85.82\n15\t66586077\t735943:2\tT\t]15:66585336]T\t85\tPASS\tEVDNC=ASSMB;HOMSEQ=TAGCTGGGATTACAGGCATGTGCCACC;MAPQ=60;MATEID=735943:1;MATENM=1;NM=6;NUMPARTS=2;SCTG=c_15_66566501_66591501_5C;SPAN=741;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:28:15:7.8:85.8,7.8,0:28:0:-85.82:85.82\n15\t66791433\t736010:1\tA\tA[15:66791732[\t29\tPASS\tEVDNC=ASSMB;INSERTION=TCCA;MAPQ=60;MATEID=736010:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_15_66787001_66812001_57C;SPAN=299;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:37:29.3:29.3,0,62.3:12:0:-29.21:29.92\n15\t66791732\t736010:2\tT\t]15:66791433]T\t29\tPASS\tEVDNC=ASSMB;INSERTION=TCCA;MAPQ=60;MATEID=736010:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_15_66787001_66812001_57C;SPAN=299;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:37:29.3:29.3,0,62.3:12:0:-29.21:29.92\n15\t67112365\t736108:1\tT\tT[15:67113267[\t21\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TTTTTAGTAGAGATGAGGTTTCACCGTGTT;MAPQ=60;MATEID=736108:2;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_15_67105501_67130501_22C;SPAN=902;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:17:18.5:21.8,0,18.5:4:5:-21.63:21.63\n15\t67113267\t736108:2\tT\t]15:67112365]T\t21\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TTTTTAGTAGAGATGAGGTTTCACCGTGTT;MAPQ=60;MATEID=736108:1;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_15_67105501_67130501_22C;SPAN=902;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:17:18.5:21.8,0,18.5:4:5:-21.63:21.63\n15\t68133682\t736498:1\tA\tA[15:68136590[\t99\tPASS\tEVDNC=ASSMB;HOMSEQ=CTGAAATTTAGATTTTTA;MAPQ=60;MATEID=736498:2;MATENM=1;NM=3;NUMPARTS=2;SCTG=c_15_68134501_68159501_0C;SPAN=2908;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:46:13:12.6:138.6,12.6,0:46:0:-138.6:138.6\n15\t68136590\t736498:2\tC\t]15:68133682]C\t99\tPASS\tEVDNC=ASSMB;HOMSEQ=CTGAAATTTAGATTTTTA;MAPQ=60;MATEID=736498:1;MATENM=3;NM=1;NUMPARTS=2;SCTG=c_15_68134501_68159501_0C;SPAN=2908;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:46:13:12.6:138.6,12.6,0:46:0:-138.6:138.6\n15\t70547227\t737285:2\tG\t]6:122850286]G\t99\tPASS\tDISC_MAPQ=59;EVDNC=ASDIS;INSERTION=C;MAPQ=60;MATEID=737285:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_15_70535501_70560501_58C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:50:22:13.8:151.8,13.8,0:38:23:-151.8:151.8\n15\t70729514\t737352:1\tA\tA[15:70735170[\t59\tPASS\tEVDNC=ASSMB;HOMSEQ=AAAGATGGGAACAA;MAPQ=60;MATEID=737352:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_15_70731501_70756501_0C;SPAN=5656;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:20:9:5.4:59.4,5.4,0:20:0:-59.41:59.41\n15\t70735170\t737352:2\tA\t]15:70729514]A\t59\tPASS\tEVDNC=ASSMB;HOMSEQ=AAAGATGGGAACAA;MAPQ=60;MATEID=737352:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_15_70731501_70756501_0C;SPAN=5656;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:20:9:5.4:59.4,5.4,0:20:0:-59.41:59.41\n15\t71199706\t737458:1\tG\t]15:71199923]G\t14\tPASS\tEVDNC=ASSMB;HOMSEQ=GGGTGTGTG;MAPQ=60;MATEID=737458:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_15_71197001_71222001_79C;SPAN=217;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:43:14.3:14.3,0,93.5:8:0:-14.32:17.71\n15\t71199923\t737458:2\tG\tG[15:71199706[\t14\tPASS\tEVDNC=ASSMB;HOMSEQ=GGGTGTGTG;MAPQ=60;MATEID=737458:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_15_71197001_71222001_79C;SPAN=217;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:43:14.3:14.3,0,93.5:8:0:-14.32:17.71\n15\t71364652\t737504:1\tA\tA[15:71371197[\t20\tPASS\tEVDNC=ASSMB;HOMSEQ=A;MAPQ=60;MATEID=737504:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_15_71368501_71393501_2C;SPAN=6545;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:20:20.9:20.9,0,27.5:8:0:-20.79:20.87\n15\t71371197\t737504:2\tA\t]15:71364652]A\t20\tPASS\tEVDNC=ASSMB;HOMSEQ=A;MAPQ=60;MATEID=737504:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_15_71368501_71393501_2C;SPAN=6545;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:20:20.9:20.9,0,27.5:8:0:-20.79:20.87\n15\t71416270\t737524:1\tA\tA[15:71421352[\t35\tPASS\tEVDNC=ASSMB;INSERTION=ACC;MAPQ=60;MATEID=737524:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_15_71417501_71442501_20C;SPAN=5082;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:15:2.3:35.3,0,2.3:12:0:-37.11:37.11\n15\t71421352\t737524:2\tC\t]15:71416270]C\t35\tPASS\tEVDNC=ASSMB;INSERTION=ACC;MAPQ=60;MATEID=737524:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_15_71417501_71442501_20C;SPAN=5082;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:15:2.3:35.3,0,2.3:12:0:-37.11:37.11\n15\t71589230\t737607:1\tT\tT[15:71590628[\t69\tPASS\tEVDNC=ASSMB;INSERTION=T;MAPQ=60;MATEID=737607:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_15_71589001_71614001_84C;SPAN=1398;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:23:20:6.3:69.3,6.3,0:23:0:-69.32:69.32\n15\t71590628\t737607:2\tA\t]15:71589230]A\t69\tPASS\tEVDNC=ASSMB;INSERTION=T;MAPQ=60;MATEID=737607:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_15_71589001_71614001_84C;SPAN=1398;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:23:20:6.3:69.3,6.3,0:23:0:-69.32:69.32\n15\t71810648\t737769:1\tG\t]15:72011907]G\t22\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=737769:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_15_72005501_72030501_35C;SPAN=201259;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:27:22.1:22.1,0,45.2:9:0:-22.12:22.58\n15\t72011907\t737769:2\tA\tA[15:71810648[\t22\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=737769:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_15_72005501_72030501_35C;SPAN=201259;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:27:22.1:22.1,0,45.2:9:0:-22.12:22.58\n15\t72093702\t737798:1\tC\tC[15:72095807[\t95\tPASS\tDISC_MAPQ=59;EVDNC=DSCRD;IMPRECISE;MAPQ=59;MATEID=737798:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=15:72093702(+)-15:72095807(-)__15_72079001_72104001D;SPAN=2105;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:32:5:8.7:95.7,8.7,0:0:32:-95.72:95.72\n15\t72095807\t737798:2\tT\t]15:72093702]T\t95\tPASS\tDISC_MAPQ=54;EVDNC=DSCRD;IMPRECISE;MAPQ=54;MATEID=737798:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=15:72093702(+)-15:72095807(-)__15_72079001_72104001D;SPAN=2105;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:32:5:8.7:95.7,8.7,0:0:32:-95.72:95.72\n15\t73871864\t738311:1\tA\tA[15:73872047[\t25\tPASS\tEVDNC=ASSMB;INSERTION=TT;MAPQ=60;MATEID=738311:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_15_73867501_73892501_12C;SPAN=183;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:50:25.7:25.7,0,98.3:12:0:-25.56:28.06\n15\t73872047\t738311:2\tA\t]15:73871864]A\t25\tPASS\tEVDNC=ASSMB;INSERTION=TT;MAPQ=60;MATEID=738311:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_15_73867501_73892501_12C;SPAN=183;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:50:25.7:25.7,0,98.3:12:0:-25.56:28.06\n15\t75332393\t739347:1\tT\tT]15:77948129]\t79\tPASS\tDISC_MAPQ=44;EVDNC=DSCRD;IMPRECISE;MAPQ=44;MATEID=739347:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=15:75332393(+)-15:77948129(+)__15_77934501_77959501D;SPAN=2615736;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:26:5:7.2:79.2,7.2,0:0:26:-79.22:79.22\n15\t76592256\t739029:1\tT\tT[15:76604598[\t99\tPASS\tEVDNC=ASSMB;HOMSEQ=T;MAPQ=60;MATEID=739029:2;MATENM=3;NM=5;NUMPARTS=2;SCTG=c_15_76587001_76612001_9C;SPAN=12342;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:39:17:10.8:118.8,10.8,0:39:0:-118.8:118.8\n15\t76604598\t739029:2\tT\t]15:76592256]T\t99\tPASS\tEVDNC=ASSMB;HOMSEQ=T;MAPQ=60;MATEID=739029:1;MATENM=5;NM=3;NUMPARTS=2;SCTG=c_15_76587001_76612001_9C;SPAN=12342;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:39:17:10.8:118.8,10.8,0:39:0:-118.8:118.8\n15\t76800145\t739080:2\tA\t]1:35259113]A\t92\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=A;MAPQ=60;MATEID=739080:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_15_76783001_76808001_25C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:31:21:8.4:92.4,8.4,0:29:9:-92.42:92.42\n15\t77716143\t739264:1\tT\tT[15:77720242[\t24\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=739264:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_15_77714001_77739001_61C;SPAN=4099;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:32:24.2:24.2,0,53.9:10:0:-24.02:24.74\n15\t77720242\t739264:2\tT\t]15:77716143]T\t24\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=739264:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_15_77714001_77739001_61C;SPAN=4099;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:32:24.2:24.2,0,53.9:10:0:-24.02:24.74\n15\t77948129\t739347:2\tT\tT]15:75332393]\t79\tPASS\tDISC_MAPQ=58;EVDNC=DSCRD;IMPRECISE;MAPQ=58;MATEID=739347:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=15:75332393(+)-15:77948129(+)__15_77934501_77959501D;SPAN=2615736;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:26:5:7.2:79.2,7.2,0:0:26:-79.22:79.22\n15\t77948962\t739680:1\tC\t[15:78747005[C\t42\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=739680:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=15:77948962(-)-15:78747005(-)__15_78743001_78768001D;SPAN=798043;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:14:1:3.9:42.9,3.9,0:0:14:-42.91:42.91\n15\t78058385\t739396:1\tC\tC[15:78058657[\t23\tPASS\tEVDNC=ASSMB;HOMSEQ=C;MAPQ=60;MATEID=739396:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_15_78057001_78082001_13C;SPAN=272;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:34:23.6:23.6,0,59.9:10:0:-23.45:24.42\n15\t78058657\t739396:2\tC\t]15:78058385]C\t23\tPASS\tEVDNC=ASSMB;HOMSEQ=C;MAPQ=60;MATEID=739396:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_15_78057001_78082001_13C;SPAN=272;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:34:23.6:23.6,0,59.9:10:0:-23.45:24.42\n15\t78747005\t739680:2\tC\t[15:77948962[C\t42\tPASS\tDISC_MAPQ=31;EVDNC=DSCRD;IMPRECISE;MAPQ=31;MATEID=739680:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=15:77948962(-)-15:78747005(-)__15_78743001_78768001D;SPAN=798043;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:14:1:3.9:42.9,3.9,0:0:14:-42.91:42.91\n15\t79973158\t740168:1\tC\tC]15:79973750]\t11\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=740168:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=15:79973158(+)-15:79973750(+)__15_79968001_79993001D;SPAN=592;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:52:11.9:11.9,0,117.5:0:8:-11.79:16.98\n15\t79973404\t740170:1\tT\tT[15:79973712[\t31\tPASS\tDISC_MAPQ=255;EVDNC=TSI_G;HOMSEQ=AA;INSERTION=TTGAATCTACCACAGCTTTGCACTGAGGCCACACATCCTACAGGCTGTTCCCAGCC;MAPQ=60;MATEID=740170:2;MATENM=0;NM=0;NUMPARTS=3;SCTG=c_15_79968001_79993001_3C;SPAN=308;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:42:31.1:31.1,0,74:13:0:-31.11:32.1\n15\t79973712\t740170:2\tA\t]15:79973404]A\t31\tPASS\tDISC_MAPQ=255;EVDNC=TSI_G;HOMSEQ=AA;INSERTION=TTGAATCTACCACAGCTTTGCACTGAGGCCACACATCCTACAGGCTGTTCCCAGCC;MAPQ=60;MATEID=740170:1;MATENM=0;NM=0;NUMPARTS=3;SCTG=c_15_79968001_79993001_3C;SPAN=308;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:42:31.1:31.1,0,74:13:0:-31.11:32.1\n15\t79973750\t740168:2\tC\tC]15:79973158]\t11\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=740168:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=15:79973158(+)-15:79973750(+)__15_79968001_79993001D;SPAN=592;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:52:11.9:11.9,0,117.5:0:8:-11.79:16.98\n15\t82882879\t741083:1\tT\tT[15:82888919[\t26\tPASS\tEVDNC=ASSMB;HOMSEQ=CACCAGCCACT;MAPQ=60;MATEID=741083:2;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_15_82883501_82908501_8C;SPAN=6040;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:23:26.6:26.6,0,29.9:10:0:-26.55:26.57\n15\t82888919\t741083:2\tC\t]15:82882879]C\t26\tPASS\tEVDNC=ASSMB;HOMSEQ=CACCAGCCACT;MAPQ=60;MATEID=741083:1;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_15_82883501_82908501_8C;SPAN=6040;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:23:26.6:26.6,0,29.9:10:0:-26.55:26.57\n15\t83105131\t741171:1\tG\tG[15:83105451[\t12\tPASS\tEVDNC=ASSMB;HOMSEQ=AGAGAAACTG;MAPQ=60;MATEID=741171:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_15_83104001_83129001_4C;SPAN=320;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:7:38:12.5:12.5,0,81.8:7:0:-12.43:15.46\n15\t83105451\t741171:2\tA\t]15:83105131]A\t12\tPASS\tEVDNC=ASSMB;HOMSEQ=AGAGAAACTG;MAPQ=60;MATEID=741171:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_15_83104001_83129001_4C;SPAN=320;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:7:38:12.5:12.5,0,81.8:7:0:-12.43:15.46\n15\t83872801\t741369:1\tT\tT[15:83875096[\t92\tPASS\tDISC_MAPQ=59;EVDNC=DSCRD;IMPRECISE;MAPQ=59;MATEID=741369:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=15:83872801(+)-15:83875096(-)__15_83863501_83888501D;SPAN=2295;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:31:19:8.4:92.4,8.4,0:0:31:-92.42:92.42\n15\t83875096\t741369:2\tT\t]15:83872801]T\t92\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=741369:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=15:83872801(+)-15:83875096(-)__15_83863501_83888501D;SPAN=2295;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:31:19:8.4:92.4,8.4,0:0:31:-92.42:92.42\n15\t84635421\t741774:1\tA\t]15:84984456]A\t27\tPASS\tEVDNC=ASSMB;HOMSEQ=AGT;MAPQ=60;MATEID=741774:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_15_84966001_84991001_39C;SPAN=349035;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:30:27.8:27.8,0,47.6:11:0:-27.88:28.16\n15\t84984456\t741774:2\tT\tT[15:84635421[\t27\tPASS\tEVDNC=ASSMB;HOMSEQ=AGT;MAPQ=60;MATEID=741774:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_15_84966001_84991001_39C;SPAN=349035;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:30:27.8:27.8,0,47.6:11:0:-27.88:28.16\n15\t85009452\t741814:1\tT\t]15:85130254]T\t28\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=741814:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=15:85009452(-)-15:85130254(+)__15_85113001_85138001D;SPAN=120802;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:27:28.7:28.7,0,38.6:0:11:-28.72:28.81\n15\t85130254\t741814:2\tA\tA[15:85009452[\t28\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=741814:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=15:85009452(-)-15:85130254(+)__15_85113001_85138001D;SPAN=120802;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:27:28.7:28.7,0,38.6:0:11:-28.72:28.81\n15\t86013468\t742255:2\tT\tT[6:163482678[\t23\tPASS\tDISC_MAPQ=52;EVDNC=DSCRD;IMPRECISE;MAPQ=52;MATEID=742255:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:163482678(-)-15:86013468(+)__15_85995001_86020001D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:10:0.5:23.6,0,0.5:0:8:-24.74:24.74\n15\t86850836\t742646:1\tA\t]15:87105091]A\t30\tPASS\tEVDNC=ASSMB;HOMSEQ=A;MAPQ=60;MATEID=742646:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_15_87097501_87122501_6C;SPAN=254255;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:21:20.6:30.5,0,20.6:11:0:-30.47:30.47\n15\t87105091\t742646:2\tA\tA[15:86850836[\t30\tPASS\tEVDNC=ASSMB;HOMSEQ=A;MAPQ=60;MATEID=742646:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_15_87097501_87122501_6C;SPAN=254255;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:21:20.6:30.5,0,20.6:11:0:-30.47:30.47\n15\t99031325\t747000:1\tC\tC[15:99032380[\t99\tPASS\tDISC_MAPQ=53;EVDNC=ASDIS;HOMSEQ=CACTGCAACCTCCGCCTCCCAGGTTCAAGTGATTCTCCTGCCTCAGCCTCCCGAGCAGCTGGGATTACAGGC;MAPQ=60;MATEID=747000:2;MATENM=3;NM=6;NUMPARTS=2;SCTG=c_15_99029001_99054001_21C;SPAN=1055;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:54:7:15:165,15,0:23:38:-165:165\n15\t99032380\t747000:2\tC\t]15:99031325]C\t99\tPASS\tDISC_MAPQ=57;EVDNC=ASDIS;HOMSEQ=CACTGCAACCTCCGCCTCCCAGGTTCAAGTGATTCTCCTGCCTCAGCCTCCCGAGCAGCTGGGATTACAGGC;MAPQ=60;MATEID=747000:1;MATENM=6;NM=3;NUMPARTS=2;SCTG=c_15_99029001_99054001_21C;SPAN=1055;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:54:7:15:165,15,0:23:38:-165:165\n15\t100146718\t747303:1\tG\t]15:100152928]G\t22\tPASS\tDISC_MAPQ=23;EVDNC=DSCRD;IMPRECISE;MAPQ=23;MATEID=747303:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=15:100146718(-)-15:100152928(+)__15_100131501_100156501D;SPAN=6210;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:39:22.1:22.1,0,74.9:0:10:-22.05:23.72\n15\t100146883\t747304:1\tA\tA[15:100153135[\t50\tPASS\tDISC_MAPQ=30;EVDNC=DSCRD;IMPRECISE;MAPQ=30;MATEID=747304:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=15:100146883(+)-15:100153135(-)__15_100131501_100156501D;SPAN=6252;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:18:33:30.5:50.3,0,30.5:0:18:-50.33:50.33\n15\t100152928\t747303:2\tG\tG[15:100146718[\t22\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=747303:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=15:100146718(-)-15:100152928(+)__15_100131501_100156501D;SPAN=6210;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:39:22.1:22.1,0,74.9:0:10:-22.05:23.72\n15\t100153135\t747304:2\tA\t]15:100146883]A\t50\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=747304:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=15:100146883(+)-15:100153135(-)__15_100131501_100156501D;SPAN=6252;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:18:33:30.5:50.3,0,30.5:0:18:-50.33:50.33\n15\t100442708\t747741:1\tC\t]15:101075010]C\t29\tPASS\tDISC_MAPQ=31;EVDNC=DSCRD;IMPRECISE;MAPQ=31;MATEID=747741:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=15:100442708(-)-15:101075010(+)__15_101062501_101087501D;SPAN=632302;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:10:12:0:29.7,0,0:0:10:-31.35:31.35\n15\t101075010\t747741:2\tG\tG[15:100442708[\t29\tPASS\tDISC_MAPQ=18;EVDNC=DSCRD;IMPRECISE;MAPQ=18;MATEID=747741:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=15:100442708(-)-15:101075010(+)__15_101062501_101087501D;SPAN=632302;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:10:12:0:29.7,0,0:0:10:-31.35:31.35\n16\t458618\t748395:1\tT\t]16:459067]T\t0\tPASS\tEVDNC=ASSMB;HOMSEQ=TCATC;MAPQ=60;MATEID=748395:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_16_441001_466001_96C;SPAN=449;SUBN=2;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/0:5:63:0.9:0,0.9,158.4:5:0:1.204:9.086\n16\t458641\t748396:1\tG\t[16:563288[G\t33\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=GGC;MAPQ=60;MATEID=748396:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_16_441001_466001_49C;SPAN=104647;SUBN=1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:33:33.8:33.8,0,47:8:7:-33.64:33.8\n16\t459067\t748395:2\tC\tC[16:458618[\t0\tPASS\tEVDNC=ASSMB;HOMSEQ=TCATC;MAPQ=60;MATEID=748395:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_16_441001_466001_96C;SPAN=449;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/0:5:63:0.9:0,0.9,158.4:5:0:1.204:9.086\n16\t480785\t748407:1\tA\tA[16:481069[\t20\tPASS\tEVDNC=ASSMB;HOMSEQ=AAAGTGCTGGGATTACAGGCGTGAGCCA;MAPQ=60;MATEID=748407:2;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_16_465501_490501_143C;SPAN=284;SUBN=2;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:35:20:20,0,66.2:9:0:-19.87:21.36\n16\t481069\t748407:2\tA\t]16:480785]A\t20\tPASS\tEVDNC=ASSMB;HOMSEQ=AAAGTGCTGGGATTACAGGCGTGAGCCA;MAPQ=60;MATEID=748407:1;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_16_465501_490501_143C;SPAN=284;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:35:20:20,0,66.2:9:0:-19.87:21.36\n16\t563288\t748396:2\tG\t[16:458641[G\t33\tPASS\tDISC_MAPQ=58;EVDNC=ASDIS;HOMSEQ=GGC;MAPQ=60;MATEID=748396:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_16_441001_466001_49C;SPAN=104647;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:33:33.8:33.8,0,47:8:7:-33.64:33.8\n16\t909933\t748564:2\tG\tG[9:119887340[\t32\tPASS\tEVDNC=ASSMB;HOMSEQ=TG;MAPQ=60;MATEID=748564:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_16_906501_931501_32C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:25:29.3:32.6,0,29.3:12:0:-32.59:32.59\n16\t1372911\t748770:1\tC\tC[16:1374091[\t46\tPASS\tDISC_MAPQ=57;EVDNC=DSCRD;IMPRECISE;MAPQ=57;MATEID=748770:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=16:1372911(+)-16:1374091(-)__16_1372001_1397001D;SPAN=1180;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:16:15:4.2:46.2,4.2,0:0:16:-46.21:46.21\n16\t1374091\t748770:2\tA\t]16:1372911]A\t46\tPASS\tDISC_MAPQ=52;EVDNC=DSCRD;IMPRECISE;MAPQ=52;MATEID=748770:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=16:1372911(+)-16:1374091(-)__16_1372001_1397001D;SPAN=1180;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:16:15:4.2:46.2,4.2,0:0:16:-46.21:46.21\n16\t1795954\t748893:1\tA\tA[16:1796104[\t5\tPASS\tEVDNC=ASSMB;HOMSEQ=CTGCCTCAGCCTCCCAAGTAGCTGGGATTA;MAPQ=60;MATEID=748893:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_16_1788501_1813501_49C;SPAN=150;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:5:38:5.9:5.9,0,88.4:5:0:-5.824:10.24\n16\t1796104\t748893:2\tC\t]16:1795954]C\t5\tPASS\tEVDNC=ASSMB;HOMSEQ=CTGCCTCAGCCTCCCAAGTAGCTGGGATTA;MAPQ=60;MATEID=748893:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_16_1788501_1813501_49C;SPAN=150;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:5:38:5.9:5.9,0,88.4:5:0:-5.824:10.24\n16\t4306246\t749770:1\tT\t]16:4449304]T\t21\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TGGTC;MAPQ=60;MATEID=749770:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_16_4434501_4459501_108C;SPAN=143058;SUBN=2;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:19:21.2:21.2,0,24.5:5:5:-21.07:21.11\n16\t4449304\t749770:2\tC\tC[16:4306246[\t21\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TGGTC;MAPQ=10;MATEID=749770:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_16_4434501_4459501_108C;SPAN=143058;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:19:21.2:21.2,0,24.5:5:5:-21.07:21.11\n16\t4622158\t749870:1\tT\tT[16:4622413[\t69\tPASS\tDISC_MAPQ=55;EVDNC=ASDIS;HOMSEQ=CTCAGCTTCCCGAGTAGCTGGGATTACAGGCACATGCCACCACACCCAGCTAATTTTT;MAPQ=60;MATEID=749870:2;MATENM=3;NM=2;NUMPARTS=2;SCTG=c_16_4606001_4631001_94C;SPAN=255;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:23:11:6.3:69.3,6.3,0:12:12:-69.32:69.32\n16\t4622413\t749870:2\tC\t]16:4622158]C\t69\tPASS\tDISC_MAPQ=59;EVDNC=ASDIS;HOMSEQ=CTCAGCTTCCCGAGTAGCTGGGATTACAGGCACATGCCACCACACCCAGCTAATTTTT;MAPQ=60;MATEID=749870:1;MATENM=2;NM=3;NUMPARTS=2;SCTG=c_16_4606001_4631001_94C;SPAN=255;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:23:11:6.3:69.3,6.3,0:12:12:-69.32:69.32\n16\t6221570\t750485:1\tA\tA]17:53112039]\t26\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=750485:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=16:6221570(+)-17:53112039(+)__16_6198501_6223501D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:12:3.2:26.3,0,3.2:0:9:-27.29:27.29\n16\t6222194\t807773:1\tA\t[17:53111341[A\t55\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=T;MAPQ=60;MATEID=807773:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_17_53091501_53116501_47C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:19:26:9.2:55.4,0,9.2:14:8:-57.2:57.2\n16\t6331609\t750547:1\tT\t]16:6340893]T\t19\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;MAPQ=60;MATEID=750547:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_16_6321001_6346001_6C;SPAN=9284;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:37:19.4:19.4,0,72.2:7:8:-19.31:21.11\n16\t6340893\t750547:2\tC\tC[16:6331609[\t19\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;MAPQ=60;MATEID=750547:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_16_6321001_6346001_6C;SPAN=9284;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:37:19.4:19.4,0,72.2:7:8:-19.31:21.11\n16\t9394638\t752239:1\tT\t]16:9394746]T\t11\tPASS\tEVDNC=ASSMB;HOMSEQ=TCCCTCCCTTCCTCTCTCCCTCCCTTCCT;MAPQ=60;MATEID=752239:2;MATENM=2;NM=2;NUMPARTS=2;SCTG=c_16_9383501_9408501_108C;SPAN=108;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:4:6:1.7:11.6,0,1.7:4:0:-11.75:11.75\n16\t9394746\t752239:2\tT\tT[16:9394638[\t11\tPASS\tEVDNC=ASSMB;HOMSEQ=TCCCTCCCTTCCTCTCTCCCTCCCTTCCT;MAPQ=60;MATEID=752239:1;MATENM=2;NM=2;NUMPARTS=2;SCTG=c_16_9383501_9408501_108C;SPAN=108;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:4:6:1.7:11.6,0,1.7:4:0:-11.75:11.75\n16\t10676991\t752774:1\tC\t]16:10677742]C\t48\tPASS\tEVDNC=ASSMB;INSERTION=CCACC;MAPQ=60;MATEID=752774:2;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_16_10657501_10682501_92C;SPAN=751;SUBN=1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:19:52:48.2:48.2,0,81.2:19:0:-48.1:48.61\n16\t10677215\t752775:1\tA\tA[16:10677733[\t86\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=752775:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_16_10657501_10682501_163C;SPAN=518;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:31:55:50.6:86.9,0,50.6:31:0:-87.35:87.35\n16\t10677733\t752775:2\tG\t]16:10677215]G\t86\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=752775:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_16_10657501_10682501_163C;SPAN=518;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:31:55:50.6:86.9,0,50.6:31:0:-87.35:87.35\n16\t10677742\t752774:2\tA\tA[16:10676991[\t48\tPASS\tEVDNC=ASSMB;INSERTION=CCACC;MAPQ=60;MATEID=752774:1;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_16_10657501_10682501_92C;SPAN=751;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:19:52:48.2:48.2,0,81.2:19:0:-48.1:48.61\n16\t11589903\t753150:1\tT\tT[16:11591439[\t29\tPASS\tDISC_MAPQ=51;EVDNC=ASDIS;HOMSEQ=CCTCCCAAAGTGCTGGGATTACAGGT;MAPQ=60;MATEID=753150:2;MATENM=8;NM=0;NUMPARTS=2;SCTG=c_16_11588501_11613501_112C;SPAN=1536;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:37:29.3:29.3,0,62.3:7:7:-29.21:29.92\n16\t11591439\t753150:2\tC\t]16:11589903]C\t29\tPASS\tDISC_MAPQ=52;EVDNC=ASDIS;HOMSEQ=CCTCCCAAAGTGCTGGGATTACAGGT;MAPQ=60;MATEID=753150:1;MATENM=0;NM=8;NUMPARTS=2;SCTG=c_16_11588501_11613501_112C;SPAN=1536;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:37:29.3:29.3,0,62.3:7:7:-29.21:29.92\n16\t11908479\t753253:1\tG\tG[16:11908788[\t95\tPASS\tEVDNC=ASSMB;HOMSEQ=AAAAATACAAAAATTAG;MAPQ=60;MATEID=753253:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_16_11907001_11932001_46C;SPAN=309;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:29:32:8.7:95.7,8.7,0:29:0:-94:94\n16\t11908788\t753253:2\tA\t]16:11908479]A\t95\tPASS\tEVDNC=ASSMB;HOMSEQ=AAAAATACAAAAATTAG;MAPQ=60;MATEID=753253:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_16_11907001_11932001_46C;SPAN=309;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:29:32:8.7:95.7,8.7,0:29:0:-94:94\n16\t14359379\t754285:1\tT\tT[16:14359797[\t12\tPASS\tEVDNC=ASSMB;HOMSEQ=T;MAPQ=60;MATEID=754285:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_16_14357001_14382001_46C;SPAN=418;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:7:38:12.5:12.5,0,81.8:7:0:-12.43:15.46\n16\t14359797\t754285:2\tT\t]16:14359379]T\t12\tPASS\tEVDNC=ASSMB;HOMSEQ=T;MAPQ=60;MATEID=754285:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_16_14357001_14382001_46C;SPAN=418;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:7:38:12.5:12.5,0,81.8:7:0:-12.43:15.46\n16\t16840521\t755143:1\tT\tT[16:16846558[\t99\tPASS\tEVDNC=ASSMB;HOMSEQ=AAGCTTAATTCTTTT;MAPQ=60;MATEID=755143:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_16_16831501_16856501_85C;SPAN=6037;SUBN=2;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:35:28:9.6:105.6,9.6,0:35:0:-105.6:105.6\n16\t16846558\t755143:2\tA\t]16:16840521]A\t99\tPASS\tEVDNC=ASSMB;HOMSEQ=AAGCTTAATTCTTTT;MAPQ=60;MATEID=755143:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_16_16831501_16856501_85C;SPAN=6037;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:35:28:9.6:105.6,9.6,0:35:0:-105.6:105.6\n16\t18821324\t755721:1\tT\tT[16:18827054[\t72\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=755721:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=16:18821324(+)-16:18827054(-)__16_18816001_18841001D;SPAN=5730;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:24:9:6.6:72.6,6.6,0:0:24:-72.62:72.62\n16\t18827054\t755721:2\tG\t]16:18821324]G\t72\tPASS\tDISC_MAPQ=56;EVDNC=DSCRD;IMPRECISE;MAPQ=56;MATEID=755721:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=16:18821324(+)-16:18827054(-)__16_18816001_18841001D;SPAN=5730;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:24:9:6.6:72.6,6.6,0:0:24:-72.62:72.62\n16\t18866485\t755809:1\tG\t]16:18999859]G\t33\tPASS\tDISC_MAPQ=18;EVDNC=DSCRD;IMPRECISE;MAPQ=18;MATEID=755809:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=16:18866485(-)-16:18999859(+)__16_18987501_19012501D;SPAN=133374;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:11:11:3:33,3,0:0:11:-33.01:33.01\n16\t18999859\t755809:2\tG\tG[16:18866485[\t33\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=755809:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=16:18866485(-)-16:18999859(+)__16_18987501_19012501D;SPAN=133374;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:11:11:3:33,3,0:0:11:-33.01:33.01\n16\t20595326\t756368:1\tC\tC[16:20601487[\t26\tPASS\tDISC_MAPQ=41;EVDNC=DSCRD;IMPRECISE;MAPQ=41;MATEID=756368:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=16:20595326(+)-16:20601487(-)__16_20580001_20605001D;SPAN=6161;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:37:26:26,0,65.6:0:11:-25.91:26.93\n16\t20601487\t756368:2\tG\t]16:20595326]G\t26\tPASS\tDISC_MAPQ=47;EVDNC=DSCRD;IMPRECISE;MAPQ=47;MATEID=756368:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=16:20595326(+)-16:20601487(-)__16_20580001_20605001D;SPAN=6161;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:37:26:26,0,65.6:0:11:-25.91:26.93\n16\t20767235\t756419:1\tG\tG[16:20767540[\t89\tPASS\tEVDNC=ASSMB;HOMSEQ=AAAAAACAGGGACCGG;MAPQ=60;MATEID=756419:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_16_20751501_20776501_13C;SPAN=305;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:29:18:8.1:89.1,8.1,0:29:0:-89.12:89.12\n16\t20767540\t756419:2\tA\t]16:20767235]A\t89\tPASS\tEVDNC=ASSMB;HOMSEQ=AAAAAACAGGGACCGG;MAPQ=60;MATEID=756419:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_16_20751501_20776501_13C;SPAN=305;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:29:18:8.1:89.1,8.1,0:29:0:-89.12:89.12\n16\t20885123\t756455:1\tC\t]16:20923726]C\t26\tPASS\tDISC_MAPQ=52;EVDNC=ASDIS;INSERTION=AAT;MAPQ=24;MATEID=756455:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_16_20923001_20948001_19C;SPAN=38603;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:13:6.2:26,0,6.2:5:7:-26.69:26.69\n16\t20923726\t756455:2\tC\tC[16:20885123[\t26\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;INSERTION=AAT;MAPQ=60;MATEID=756455:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_16_20923001_20948001_19C;SPAN=38603;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:13:6.2:26,0,6.2:5:7:-26.69:26.69\n16\t23036574\t757051:1\tT\tT[16:23038210[\t99\tPASS\tDISC_MAPQ=58;EVDNC=DSCRD;IMPRECISE;MAPQ=58;MATEID=757051:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=16:23036574(+)-16:23038210(-)__16_23030001_23055001D;SPAN=1636;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:58:11:16.2:178.2,16.2,0:0:58:-178.2:178.2\n16\t23038210\t757051:2\tG\t]16:23036574]G\t99\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=757051:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=16:23036574(+)-16:23038210(-)__16_23030001_23055001D;SPAN=1636;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:58:11:16.2:178.2,16.2,0:0:58:-178.2:178.2\n16\t23454885\t757171:1\tC\t]16:23455660]C\t18\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=CCTGTAATCCCAGCTACTCAGGAGGCAGAGGCAGGAGAA;MAPQ=60;MATEID=757171:2;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_16_23446501_23471501_48C;SPAN=775;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:41:18.2:18.2,0,84.2:7:6:-18.18:20.65\n16\t23455660\t757171:2\tA\tA[16:23454885[\t18\tPASS\tDISC_MAPQ=59;EVDNC=ASDIS;HOMSEQ=CCTGTAATCCCAGCTACTCAGGAGGCAGAGGCAGGAGAA;MAPQ=60;MATEID=757171:1;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_16_23446501_23471501_48C;SPAN=775;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:41:18.2:18.2,0,84.2:7:6:-18.18:20.65\n16\t23517232\t757200:1\tT\tT[16:23517528[\t89\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=CCCAGCTAATTTTTTTCT;MAPQ=60;MATEID=757200:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_16_23495501_23520501_18C;SPAN=296;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:28:29:8.1:89.1,8.1,0:20:13:-89.12:89.12\n16\t23517528\t757200:2\tC\t]16:23517232]C\t89\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=CCCAGCTAATTTTTTTCT;MAPQ=60;MATEID=757200:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_16_23495501_23520501_18C;SPAN=296;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:28:29:8.1:89.1,8.1,0:20:13:-89.12:89.12\n16\t23801697\t757334:1\tC\tC[16:23801784[\t12\tPASS\tEVDNC=ASSMB;HOMSEQ=CCCTTCCCTTCCCTTCCCTTC;MAPQ=60;MATEID=757334:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_16_23789501_23814501_0C;SPAN=87;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:5:16:12.2:12.2,0,25.4:5:0:-12.01:12.37\n16\t23801784\t757334:2\tC\t]16:23801697]C\t12\tPASS\tEVDNC=ASSMB;HOMSEQ=CCCTTCCCTTCCCTTCCCTTC;MAPQ=60;MATEID=757334:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_16_23789501_23814501_0C;SPAN=87;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:5:16:12.2:12.2,0,25.4:5:0:-12.01:12.37\n16\t24412394\t813236:1\tA\t]17:68005944]A\t49\tPASS\tDISC_MAPQ=32;EVDNC=DSCRD;IMPRECISE;MAPQ=32;MATEID=813236:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=16:24412394(-)-17:68005944(+)__17_67987501_68012501D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:17:17:4.5:49.5,4.5,0:0:17:-49.51:49.51\n16\t25054926\t757985:1\tT\tT[16:25126102[\t25\tPASS\tDISC_MAPQ=58;EVDNC=DSCRD;IMPRECISE;MAPQ=58;MATEID=757985:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=16:25054926(+)-16:25126102(-)__16_25112501_25137501D;SPAN=71176;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:26:25.7:25.7,0,38.9:0:10:-25.7:25.87\n16\t25055244\t757986:1\tG\t]16:25126503]G\t50\tPASS\tDISC_MAPQ=52;EVDNC=DSCRD;IMPRECISE;MAPQ=52;MATEID=757986:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=16:25055244(-)-16:25126503(+)__16_25112501_25137501D;SPAN=71259;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:17:21:0.8:50.3,0,0.8:0:17:-52.77:52.77\n16\t25126102\t757985:2\tA\t]16:25054926]A\t25\tPASS\tDISC_MAPQ=49;EVDNC=DSCRD;IMPRECISE;MAPQ=49;MATEID=757985:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=16:25054926(+)-16:25126102(-)__16_25112501_25137501D;SPAN=71176;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:26:25.7:25.7,0,38.9:0:10:-25.7:25.87\n16\t25126503\t757986:2\tT\tT[16:25055244[\t50\tPASS\tDISC_MAPQ=45;EVDNC=DSCRD;IMPRECISE;MAPQ=45;MATEID=757986:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=16:25055244(-)-16:25126503(+)__16_25112501_25137501D;SPAN=71259;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:17:21:0.8:50.3,0,0.8:0:17:-52.77:52.77\n16\t25328890\t758100:1\tA\tA[16:25331806[\t99\tPASS\tDISC_MAPQ=59;EVDNC=DSCRD;IMPRECISE;MAPQ=59;MATEID=758100:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=16:25328890(+)-16:25331806(-)__16_25308501_25333501D;SPAN=2916;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:39:6:10.8:118.8,10.8,0:0:39:-118.8:118.8\n16\t25331806\t758100:2\tT\t]16:25328890]T\t99\tPASS\tDISC_MAPQ=59;EVDNC=DSCRD;IMPRECISE;MAPQ=59;MATEID=758100:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=16:25328890(+)-16:25331806(-)__16_25308501_25333501D;SPAN=2916;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:39:6:10.8:118.8,10.8,0:0:39:-118.8:118.8\n16\t25806596\t916305:1\tT\t]22:28669594]T\t0\tPASS\tEVDNC=ASSMB;HOMSEQ=TT;MAPQ=60;MATEID=916305:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_22_28665001_28690001_17C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:116:0.5:0.5,0,290.9:10:0:-0.4034:18.55\n16\t25844053\t887220:1\tC\tC[20:57997438[\t16\tPASS\tEVDNC=ASSMB;INSERTION=ACTCCAGCAGTTATGTACTATATATATATAT;MAPQ=60;MATEID=887220:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_57991501_58016501_94C;SPAN=-1;SUBN=8;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:58:16.7:16.7,0,128.9:10:0:-16.71:21.77\n16\t26374051\t758532:1\tT\t]16:26375000]T\t99\tPASS\tDISC_MAPQ=52;EVDNC=ASDIS;HOMSEQ=TGGATGGATGGGTG;MAPQ=60;MATEID=758532:2;MATENM=0;NM=7;NUMPARTS=2;SCTG=c_16_26362001_26387001_113C;SPAN=949;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:44:55:7.7:129.8,0,7.7:12:36:-136.1:136.1\n16\t26375000\t758532:2\tG\tG[16:26374051[\t99\tPASS\tDISC_MAPQ=56;EVDNC=ASDIS;HOMSEQ=TGGATGGATGGGTG;MAPQ=37;MATEID=758532:1;MATENM=7;NM=0;NUMPARTS=2;SCTG=c_16_26362001_26387001_113C;SPAN=949;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:44:55:7.7:129.8,0,7.7:12:36:-136.1:136.1\n16\t26596716\t758591:1\tT\tT[16:26597045[\t37\tPASS\tDISC_MAPQ=59;EVDNC=ASDIS;HOMSEQ=CCTCTTCACATCTT;MAPQ=60;MATEID=758591:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_16_26582501_26607501_31C;SPAN=329;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:21:14:37.1,0,14:7:8:-37.47:37.47\n16\t26597045\t758591:2\tC\t]16:26596716]C\t37\tPASS\tDISC_MAPQ=58;EVDNC=ASDIS;HOMSEQ=CCTCTTCACATCTT;MAPQ=60;MATEID=758591:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_16_26582501_26607501_31C;SPAN=329;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:21:14:37.1,0,14:7:8:-37.47:37.47\n16\t27941595\t759035:1\tC\t[16:27942199[C\t99\tPASS\tDISC_MAPQ=55;EVDNC=ASDIS;HOMSEQ=CCCGGGAGGCAGAGGTTGCCGTGAGCCAAGATTGTGCCACTGCACTC;MAPQ=60;MATEID=759035:2;MATENM=3;NM=0;NUMPARTS=2;SCTG=c_16_27930001_27955001_145C;SPAN=604;SUBN=5;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:45:37:12.6:138.6,12.6,0:31:29:-138.6:138.6\n16\t27942199\t759035:2\tG\t[16:27941595[G\t99\tPASS\tDISC_MAPQ=28;EVDNC=ASDIS;HOMSEQ=CCCGGGAGGCAGAGGTTGCCGTGAGCCAAGATTGTGCCACTGCACTC;MAPQ=60;MATEID=759035:1;MATENM=0;NM=3;NUMPARTS=2;SCTG=c_16_27930001_27955001_145C;SPAN=604;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:45:37:12.6:138.6,12.6,0:31:29:-138.6:138.6\n16\t29226840\t759567:1\tC\tC]16:29227193]\t23\tPASS\tDISC_MAPQ=25;EVDNC=DSCRD;IMPRECISE;MAPQ=25;MATEID=759567:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=16:29226840(+)-16:29227193(+)__16_29204001_29229001D;SPAN=353;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:8:0:2.1:23.1,2.1,0:0:8:-23.11:23.11\n16\t29227193\t759567:2\tA\tA]16:29226840]\t23\tPASS\tDISC_MAPQ=52;EVDNC=DSCRD;IMPRECISE;MAPQ=52;MATEID=759567:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=16:29226840(+)-16:29227193(+)__16_29204001_29229001D;SPAN=353;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:8:0:2.1:23.1,2.1,0:0:8:-23.11:23.11\n16\t31103571\t760178:2\tC\t[2:3592332[C\t25\tPASS\tDISC_MAPQ=9;EVDNC=ASDIS;HOMSEQ=CTCTCC;MAPQ=37;MATEID=760178:1;MATENM=0;NM=4;NUMPARTS=2;SCTG=c_16_31090501_31115501_14C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:17:15.2:25.1,0,15.2:8:2:-24.99:24.99\n16\t31371775\t760282:2\tG\t]9:107182828]G\t24\tPASS\tEVDNC=ASSMB;INSERTION=TATATACATTAAACAA;MAPQ=60;MATEID=760282:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_16_31360001_31385001_63C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:19:21.2:24.5,0,21.2:9:0:-24.37:24.37\n16\t34226949\t762361:1\tA\t]16:34231988]A\t85\tPASS\tDISC_MAPQ=58;EVDNC=DSCRD;IMPRECISE;MAPQ=58;MATEID=762361:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=16:34226949(-)-16:34231988(+)__16_34226501_34251501D;SPAN=5039;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:31:59:62.6:85.7,0,62.6:0:31:-85.93:85.93\n16\t34231988\t762361:2\tC\tC[16:34226949[\t85\tPASS\tDISC_MAPQ=59;EVDNC=DSCRD;IMPRECISE;MAPQ=59;MATEID=762361:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=16:34226949(-)-16:34231988(+)__16_34226501_34251501D;SPAN=5039;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:31:59:62.6:85.7,0,62.6:0:31:-85.93:85.93\n16\t34277222\t762434:1\tA\tA[16:36768349[\t99\tPASS\tDISC_MAPQ=8;EVDNC=ASDIS;HOMSEQ=CTAGACAGAAGAATTCTCAGTAACTTCCTTGTGTTGTGTGTATTCA;MAPQ=31;MATEID=762434:2;MATENM=0;NM=12;NUMPARTS=2;SCTG=c_16_34275501_34300501_207C;SPAN=2491127;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:40:36:11.1:122.1,11.1,0:33:10:-122.1:122.1\n16\t34647464\t762802:1\tA\t]16:34750727]A\t59\tPASS\tEVDNC=ASSMB;HOMSEQ=AT;MAPQ=60;MATEID=762802:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_16_34741001_34766001_84C;SPAN=103263;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:19:22:2.7:59.4,2.7,0:19:0:-60.34:60.34\n16\t34714098\t762605:2\tG\tG]7:61065398]\t82\tPASS\tDISC_MAPQ=5;EVDNC=ASDIS;INSERTION=CAAATAGACT;MAPQ=49;MATEID=762605:1;MATENM=7;NM=20;NUMPARTS=2;SCTG=c_16_34692001_34717001_199C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:28:35:3.5:82.7,0,3.5:21:10:-86.59:86.59\n16\t34715602\t762653:1\tT\tT[16:36241058[\t47\tPASS\tDISC_MAPQ=12;EVDNC=TSI_G;HOMSEQ=TGATGATTCCATTTGAGTCCATTCAATGGTGATTAAATTCGATTCCATTTGATGATTCCATTCAATTCCAT;INSERTION=TCCATTTGATGATTCCATTCAATTCCATACGATGATTCCATTCCATTCCTTTCAAAGATGAATT;MAPQ=28;MATEID=762653:2;MATENM=0;NM=10;NUMPARTS=3;SCTG=c_16_34692001_34717001_133C;SECONDARY;SPAN=1525456;SUBN=5;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:17:29:24.8:47.9,0,24.8:17:4:-48.35:48.35\n16\t34750727\t762802:2\tT\tT[16:34647464[\t59\tPASS\tEVDNC=ASSMB;HOMSEQ=AT;MAPQ=60;MATEID=762802:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_16_34741001_34766001_84C;SPAN=103263;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:19:22:2.7:59.4,2.7,0:19:0:-60.34:60.34\n16\t34954400\t97080:2\tA\tA]2:91409350]\t99\tPASS\tDISC_MAPQ=18;EVDNC=DSCRD;IMPRECISE;MAPQ=2;MATEID=97080:1;MATENM=5;NM=2;NUMPARTS=2;SCTG=c_2_91385001_91410001_138C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:38:38:10.5:115.5,10.5,0:27:15:-115.5:115.5\n16\t35481713\t763324:2\tA\t]15:56767901]A\t29\tPASS\tEVDNC=ASSMB;HOMSEQ=A;MAPQ=60;MATEID=763324:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_16_35476001_35501001_13C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:13:2.9:29.3,0,2.9:10:0:-30.55:30.55\n16\t36178073\t395755:2\tT\t[7:58048127[T\t19\tPASS\tDISC_MAPQ=26;EVDNC=DSCRD;IMPRECISE;MAPQ=26;MATEID=395755:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:58048127(-)-16:36178073(-)__7_58040501_58065501D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:37:19.4:19.4,0,72.2:0:9:-19.31:21.11\n16\t36241058\t762653:2\tC\t]16:34715602]C\t47\tPASS\tDISC_MAPQ=15;EVDNC=TSI_G;HOMSEQ=TGATGATTCCATTTGAGTCCATTCAATGGTGATTAAATTCGATTCCATTTGATGATTCCATTCAATTCCAT;INSERTION=TCCATTTGATGATTCCATTCAATTCCATACGATGATTCCATTCCATTCCTTTCAAAGATGAATT;MAPQ=38;MATEID=762653:1;MATENM=10;NM=0;NUMPARTS=3;SCTG=c_16_34692001_34717001_133C;SECONDARY;SPAN=1525456;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:17:29:24.8:47.9,0,24.8:17:4:-48.35:48.35\n16\t36315759\t764049:1\tA\tA[16:36322173[\t46\tPASS\tDISC_MAPQ=33;EVDNC=DSCRD;IMPRECISE;MAPQ=33;MATEID=764049:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=16:36315759(+)-16:36322173(-)__16_36309001_36334001D;SPAN=6414;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:15:18:1.5:46.2,1.5,0:0:15:-47.02:47.02\n16\t36322173\t764049:2\tA\t]16:36315759]A\t46\tPASS\tDISC_MAPQ=54;EVDNC=DSCRD;IMPRECISE;MAPQ=54;MATEID=764049:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=16:36315759(+)-16:36322173(-)__16_36309001_36334001D;SPAN=6414;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:15:18:1.5:46.2,1.5,0:0:15:-47.02:47.02\n16\t36325746\t764074:1\tT\t]16:38254796]T\t99\tPASS\tEVDNC=ASSMB;HOMSEQ=TAAAAACTAGACAGAA;MAPQ=41;MATEID=764074:2;MATENM=0;NM=3;NUMPARTS=2;SCTG=c_16_36309001_36334001_69C;SPAN=1929050;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:63:0:17.4:191.4,17.4,0:63:0:-191.4:191.4\n16\t36326163\t764132:1\tT\tT[16:36335907[\t28\tPASS\tDISC_MAPQ=40;EVDNC=DSCRD;IMPRECISE;MAPQ=40;MATEID=764132:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=16:36326163(+)-16:36335907(-)__16_36333501_36358501D;SPAN=9744;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:40:28.4:28.4,0,71.3:0:12:-28.37:29.43\n16\t36326237\t764133:1\tT\tT]16:36337448]\t17\tPASS\tDISC_MAPQ=17;EVDNC=DSCRD;IMPRECISE;MAPQ=17;MATEID=764133:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=16:36326237(+)-16:36337448(+)__16_36333501_36358501D;SPAN=11211;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:31:17.9:17.9,0,57.5:0:8:-17.69:19\n16\t36335907\t764132:2\tC\t]16:36326163]C\t28\tPASS\tDISC_MAPQ=26;EVDNC=DSCRD;IMPRECISE;MAPQ=26;MATEID=764132:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=16:36326163(+)-16:36335907(-)__16_36333501_36358501D;SPAN=9744;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:40:28.4:28.4,0,71.3:0:12:-28.37:29.43\n16\t36337448\t764133:2\tC\tC]16:36326237]\t17\tPASS\tDISC_MAPQ=39;EVDNC=DSCRD;IMPRECISE;MAPQ=39;MATEID=764133:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=16:36326237(+)-16:36337448(+)__16_36333501_36358501D;SPAN=11211;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:31:17.9:17.9,0,57.5:0:8:-17.69:19\n16\t36342786\t764455:1\tT\tT[16:38253962[\t41\tPASS\tDISC_MAPQ=31;EVDNC=DSCRD;IMPRECISE;MAPQ=31;MATEID=764455:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=16:36342786(+)-16:38253962(-)__16_38244501_38269501D;SPAN=1911176;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:16:39:41.9:41.9,0,55.1:0:16:-41.85:41.97\n16\t36343245\t764152:1\tA\t]16:36351031]A\t26\tPASS\tDISC_MAPQ=29;EVDNC=DSCRD;IMPRECISE;MAPQ=29;MATEID=764152:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=16:36343245(-)-16:36351031(+)__16_36333501_36358501D;SPAN=7786;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:46:26.9:26.9,0,86.3:0:12:-26.68:28.57\n16\t36348587\t764356:1\tT\tT[16:37915278[\t56\tPASS\tDISC_MAPQ=31;EVDNC=DSCRD;IMPRECISE;MAPQ=31;MATEID=764356:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=16:36348587(+)-16:37915278(-)__16_37901501_37926501D;SPAN=1566691;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:19:10:5.1:56.1,5.1,0:0:19:-56.11:56.11\n16\t36350693\t764203:1\tA\t]16:36714722]A\t99\tPASS\tDISC_MAPQ=47;EVDNC=DSCRD;IMPRECISE;MAPQ=47;MATEID=764203:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=16:36350693(-)-16:36714722(+)__16_36701001_36726001D;SPAN=364029;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:39:6:10.8:118.8,10.8,0:0:39:-118.8:118.8\n16\t36351031\t764152:2\tA\tA[16:36343245[\t26\tPASS\tDISC_MAPQ=51;EVDNC=DSCRD;IMPRECISE;MAPQ=51;MATEID=764152:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=16:36343245(-)-16:36351031(+)__16_36333501_36358501D;SPAN=7786;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:46:26.9:26.9,0,86.3:0:12:-26.68:28.57\n16\t36353193\t847883:1\tA\tA[19:27240874[\t26\tPASS\tDISC_MAPQ=29;EVDNC=DSCRD;IMPRECISE;MAPQ=29;MATEID=847883:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=16:36353193(+)-19:27240874(-)__19_27219501_27244501D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:9:3:2.4:26.4,2.4,0:0:9:-26.41:26.41\n16\t36356275\t764168:1\tG\t]16:36379416]G\t46\tPASS\tDISC_MAPQ=33;EVDNC=DSCRD;IMPRECISE;MAPQ=33;MATEID=764168:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=16:36356275(-)-16:36379416(+)__16_36358001_36383001D;SPAN=23141;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:15:14:4.2:46.2,4.2,0:0:15:-46.21:46.21\n16\t36379416\t764168:2\tA\tA[16:36356275[\t46\tPASS\tDISC_MAPQ=38;EVDNC=DSCRD;IMPRECISE;MAPQ=38;MATEID=764168:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=16:36356275(-)-16:36379416(+)__16_36358001_36383001D;SPAN=23141;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:15:14:4.2:46.2,4.2,0:0:15:-46.21:46.21\n16\t36714399\t764204:1\tG\t]16:36909413]G\t79\tPASS\tDISC_MAPQ=15;EVDNC=DSCRD;IMPRECISE;MAPQ=15;MATEID=764204:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=16:36714399(-)-16:36909413(+)__16_36701001_36726001D;SPAN=195014;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:26:8:7.2:79.2,7.2,0:0:26:-79.22:79.22\n16\t36714722\t764203:2\tA\tA[16:36350693[\t99\tPASS\tDISC_MAPQ=18;EVDNC=DSCRD;IMPRECISE;MAPQ=18;MATEID=764203:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=16:36350693(-)-16:36714722(+)__16_36701001_36726001D;SPAN=364029;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:39:6:10.8:118.8,10.8,0:0:39:-118.8:118.8\n16\t36747721\t764207:1\tA\t]16:37962854]A\t89\tPASS\tDISC_MAPQ=16;EVDNC=DSCRD;IMPRECISE;MAPQ=16;MATEID=764207:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=16:36747721(-)-16:37962854(+)__16_36725501_36750501D;SPAN=1215133;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:29:3:8.1:89.1,8.1,0:0:29:-89.12:89.12\n16\t36768349\t762434:2\tC\t]16:34277222]C\t99\tPASS\tDISC_MAPQ=54;EVDNC=ASDIS;HOMSEQ=CTAGACAGAAGAATTCTCAGTAACTTCCTTGTGTTGTGTGTATTCA;MAPQ=55;MATEID=762434:1;MATENM=12;NM=0;NUMPARTS=2;SCTG=c_16_34275501_34300501_207C;SPAN=2491127;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:40:36:11.1:122.1,11.1,0:33:10:-122.1:122.1\n16\t36909413\t764204:2\tT\tT[16:36714399[\t79\tPASS\tDISC_MAPQ=48;EVDNC=DSCRD;IMPRECISE;MAPQ=48;MATEID=764204:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=16:36714399(-)-16:36909413(+)__16_36701001_36726001D;SPAN=195014;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:26:8:7.2:79.2,7.2,0:0:26:-79.22:79.22\n16\t37104034\t764363:1\tT\t]16:37939320]T\t59\tPASS\tDISC_MAPQ=32;EVDNC=DSCRD;IMPRECISE;MAPQ=32;MATEID=764363:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=16:37104034(-)-16:37939320(+)__16_37926001_37951001D;SPAN=835286;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:20:19:5.4:59.4,5.4,0:0:20:-59.41:59.41\n16\t37915278\t764356:2\tT\t]16:36348587]T\t56\tPASS\tDISC_MAPQ=32;EVDNC=DSCRD;IMPRECISE;MAPQ=32;MATEID=764356:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=16:36348587(+)-16:37915278(-)__16_37901501_37926501D;SPAN=1566691;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:19:10:5.1:56.1,5.1,0:0:19:-56.11:56.11\n16\t37938824\t764402:1\tT\t]16:38166645]T\t32\tPASS\tDISC_MAPQ=37;EVDNC=DSCRD;IMPRECISE;MAPQ=37;MATEID=764402:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=16:37938824(-)-16:38166645(+)__16_38146501_38171501D;SPAN=227821;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:15:5.6:32,0,5.6:0:11:-33.15:33.15\n16\t37939320\t764363:2\tT\tT[16:37104034[\t59\tPASS\tDISC_MAPQ=44;EVDNC=DSCRD;IMPRECISE;MAPQ=44;MATEID=764363:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=16:37104034(-)-16:37939320(+)__16_37926001_37951001D;SPAN=835286;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:20:19:5.4:59.4,5.4,0:0:20:-59.41:59.41\n16\t37962854\t764207:2\tA\tA[16:36747721[\t89\tPASS\tDISC_MAPQ=28;EVDNC=DSCRD;IMPRECISE;MAPQ=28;MATEID=764207:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=16:36747721(-)-16:37962854(+)__16_36725501_36750501D;SPAN=1215133;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:29:3:8.1:89.1,8.1,0:0:29:-89.12:89.12\n16\t38166645\t764402:2\tT\tT[16:37938824[\t32\tPASS\tDISC_MAPQ=31;EVDNC=DSCRD;IMPRECISE;MAPQ=31;MATEID=764402:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=16:37938824(-)-16:38166645(+)__16_38146501_38171501D;SPAN=227821;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:15:5.6:32,0,5.6:0:11:-33.15:33.15\n16\t38253962\t764455:2\tC\t]16:36342786]C\t41\tPASS\tDISC_MAPQ=19;EVDNC=DSCRD;IMPRECISE;MAPQ=19;MATEID=764455:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=16:36342786(+)-16:38253962(-)__16_38244501_38269501D;SPAN=1911176;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:16:39:41.9:41.9,0,55.1:0:16:-41.85:41.97\n16\t38254796\t764074:2\tA\tA[16:36325746[\t99\tPASS\tEVDNC=ASSMB;HOMSEQ=TAAAAACTAGACAGAA;MAPQ=56;MATEID=764074:1;MATENM=3;NM=0;NUMPARTS=2;SCTG=c_16_36309001_36334001_69C;SPAN=1929050;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:63:0:17.4:191.4,17.4,0:63:0:-191.4:191.4\n16\t48247011\t764887:1\tG\t]16:48247537]G\t27\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=764887:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=16:48247011(-)-16:48247537(+)__16_48240501_48265501D;SPAN=526;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:31:27.8:27.8,0,47.6:0:11:-27.6:27.96\n16\t48247537\t764887:2\tT\tT[16:48247011[\t27\tPASS\tDISC_MAPQ=56;EVDNC=DSCRD;IMPRECISE;MAPQ=56;MATEID=764887:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=16:48247011(-)-16:48247537(+)__16_48240501_48265501D;SPAN=526;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:31:27.8:27.8,0,47.6:0:11:-27.6:27.96\n16\t48871495\t764957:1\tA\tA]16:48872234]\t46\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=764957:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=16:48871495(+)-16:48872234(+)__16_48853001_48878001D;SPAN=739;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:15:7:4.2:46.2,4.2,0:0:15:-46.21:46.21\n16\t48871899\t764958:1\tG\t[16:48872323[G\t75\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=764958:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=16:48871899(-)-16:48872323(-)__16_48853001_48878001D;SPAN=424;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:25:13:6.9:75.9,6.9,0:0:25:-75.92:75.92\n16\t48872234\t764957:2\tT\tT]16:48871495]\t46\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=764957:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=16:48871495(+)-16:48872234(+)__16_48853001_48878001D;SPAN=739;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:15:7:4.2:46.2,4.2,0:0:15:-46.21:46.21\n16\t48872323\t764958:2\tT\t[16:48871899[T\t75\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=764958:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=16:48871899(-)-16:48872323(-)__16_48853001_48878001D;SPAN=424;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:25:13:6.9:75.9,6.9,0:0:25:-75.92:75.92\n16\t55760663\t766440:1\tC\t[16:55833056[C\t21\tPASS\tDISC_MAPQ=53;EVDNC=DSCRD;IMPRECISE;MAPQ=53;MATEID=766440:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=16:55760663(-)-16:55833056(-)__16_55811001_55836001D;SPAN=72393;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:17:18.5:21.8,0,18.5:0:8:-21.63:21.63\n16\t55833056\t766440:2\tC\t[16:55760663[C\t21\tPASS\tDISC_MAPQ=41;EVDNC=DSCRD;IMPRECISE;MAPQ=41;MATEID=766440:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=16:55760663(-)-16:55833056(-)__16_55811001_55836001D;SPAN=72393;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:17:18.5:21.8,0,18.5:0:8:-21.63:21.63\n16\t58613311\t767109:1\tC\tC[16:58616361[\t62\tPASS\tEVDNC=ASSMB;HOMSEQ=CTCCCAAAGTGCTGGGATTACAGGC;MAPQ=60;MATEID=767109:2;MATENM=7;NM=1;NUMPARTS=2;SCTG=c_16_58604001_58629001_1C;SPAN=3050;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:21:11:5.7:62.7,5.7,0:21:0:-62.72:62.72\n16\t58616361\t767109:2\tC\t]16:58613311]C\t62\tPASS\tEVDNC=ASSMB;HOMSEQ=CTCCCAAAGTGCTGGGATTACAGGC;MAPQ=60;MATEID=767109:1;MATENM=1;NM=7;NUMPARTS=2;SCTG=c_16_58604001_58629001_1C;SPAN=3050;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:21:11:5.7:62.7,5.7,0:21:0:-62.72:62.72\n16\t61045452\t692473:2\tA\tA]14:37300358]\t22\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=692473:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=14:37300358(+)-16:61045452(+)__14_37289001_37314001D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:13:9.5:22.7,0,9.5:0:8:-23.02:23.02\n16\t61225881\t767719:1\tA\t]16:61227731]A\t34\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=767719:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_16_61225501_61250501_17C;SPAN=1850;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:41:34.7:34.7,0,67.7:14:0:-34.69:35.3\n16\t61227731\t767719:2\tT\tT[16:61225881[\t34\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=767719:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_16_61225501_61250501_17C;SPAN=1850;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:41:34.7:34.7,0,67.7:14:0:-34.69:35.3\n16\t61747718\t767831:1\tT\t]16:61755731]T\t35\tPASS\tEVDNC=ASSMB;INSERTION=ATTTCTAAAATTAAAATAACTGAATTT;MAPQ=60;MATEID=767831:2;MATENM=0;NM=4;NUMPARTS=2;SCTG=c_16_61740001_61765001_3C;SPAN=8013;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:37:35.9:35.9,0,55.7:14:0:-35.81:36.09\n16\t61755731\t767831:2\tA\tA[16:61747718[\t35\tPASS\tEVDNC=ASSMB;INSERTION=ATTTCTAAAATTAAAATAACTGAATTT;MAPQ=60;MATEID=767831:1;MATENM=4;NM=0;NUMPARTS=2;SCTG=c_16_61740001_61765001_3C;SPAN=8013;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:37:35.9:35.9,0,55.7:14:0:-35.81:36.09\n16\t63759379\t768310:2\tA\tA[4:21714832[\t62\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TTATTTTATTTTATTTTATTTTATTTTATTTTA;MAPQ=60;MATEID=768310:1;MATENM=0;NM=10;NUMPARTS=2;SCTG=c_16_63749001_63774001_22C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:21:16:5.7:62.7,5.7,0:19:2:-62.72:62.72\n16\t65129169\t1010103:1\tT\t[Un_JTFH01001895v1_decoy:1[T\t33\tPASS\tDISC_MAPQ=255;EVDNC=TSI_G;HOMSEQ=TATTTTATATATTGTATAAGAATATATA;INSERTION=TATGTAATATCTATTTTATACACTATACAAGAATATGTAATATCTAATTATTTTATATACTGTGTAAGAATATATAACATATAGTTATTTTATACATTGTATAAGAATATATAATATCTAGTTATTTTATACATTGTATAAGAATATATAATATCTAGTTATTTTATATATTGTATAAGAATATATAATATCTAGT;MAPQ=60;MATEID=1010103:2;MATENM=0;NM=0;NUMPARTS=5;SCTG=c_2738_1_2599_7C;SECONDARY;SPAN=-1;SUBN=3;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:11:4:3:33,3,0:11:0:-33.01:33.01\n16\t69033084\t769342:1\tG\t]16:69161208]G\t16\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;MAPQ=60;MATEID=769342:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_16_69016501_69041501_7C;SPAN=128124;SUBN=2;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:7:24:16.4:16.4,0,42.8:5:3:-16.36:17.07\n16\t69161208\t769342:2\tT\tT[16:69033084[\t16\tPASS\tDISC_MAPQ=43;EVDNC=ASDIS;MAPQ=60;MATEID=769342:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_16_69016501_69041501_7C;SPAN=128124;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:7:24:16.4:16.4,0,42.8:5:3:-16.36:17.07\n16\t69727926\t769622:1\tC\t[16:69728993[C\t99\tPASS\tDISC_MAPQ=53;EVDNC=ASDIS;HOMSEQ=CTTGA;MAPQ=60;MATEID=769622:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_16_69727001_69752001_46C;SPAN=1067;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:33:34:9.3:102.3,9.3,0:20:17:-102.3:102.3\n16\t69728344\t769625:1\tG\tG]16:69729043]\t85\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=769625:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=16:69728344(+)-16:69729043(+)__16_69727001_69752001D;SPAN=699;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:28:26:7.8:85.8,7.8,0:0:28:-85.82:85.82\n16\t69728993\t769622:2\tT\t[16:69727926[T\t99\tPASS\tDISC_MAPQ=57;EVDNC=ASDIS;HOMSEQ=CTTGA;MAPQ=60;MATEID=769622:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_16_69727001_69752001_46C;SPAN=1067;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:33:34:9.3:102.3,9.3,0:20:17:-102.3:102.3\n16\t69729043\t769625:2\tA\tA]16:69728344]\t85\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=769625:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=16:69728344(+)-16:69729043(+)__16_69727001_69752001D;SPAN=699;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:28:26:7.8:85.8,7.8,0:0:28:-85.82:85.82\n16\t69820428\t769676:1\tG\tG[16:69824903[\t29\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;INSERTION=T;MAPQ=60;MATEID=769676:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_16_69825001_69850001_82C;SPAN=4475;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:10:7:2.7:29.7,2.7,0:8:2:-29.71:29.71\n16\t69820783\t769677:1\tA\t]16:69825118]A\t35\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;INSERTION=CAAAAGTGAACA;MAPQ=60;MATEID=769677:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_16_69825001_69850001_98C;SPAN=4335;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:15:2.3:35.3,0,2.3:6:9:-37.11:37.11\n16\t69824903\t769676:2\tT\t]16:69820428]T\t29\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;INSERTION=T;MAPQ=60;MATEID=769676:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_16_69825001_69850001_82C;SPAN=4475;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:10:7:2.7:29.7,2.7,0:8:2:-29.71:29.71\n16\t69825118\t769677:2\tA\tA[16:69820783[\t35\tPASS\tDISC_MAPQ=54;EVDNC=ASDIS;INSERTION=CAAAAGTGAACA;MAPQ=60;MATEID=769677:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_16_69825001_69850001_98C;SPAN=4335;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:15:2.3:35.3,0,2.3:6:9:-37.11:37.11\n16\t70087940\t769777:2\tT\t[2:31423208[T\t99\tPASS\tDISC_MAPQ=31;EVDNC=ASDIS;MAPQ=60;MATEID=769777:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_16_70070001_70095001_81C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:35:14:9.6:105.6,9.6,0:26:21:-105.6:105.6\n16\t70519121\t769901:1\tT\tT[16:70519427[\t15\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AGGATTTGCATTTCT;MAPQ=60;MATEID=769901:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_16_70511001_70536001_3C;SPAN=306;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:7:27:15.5:15.5,0,51.8:5:4:-15.52:16.64\n16\t70519427\t769901:2\tA\t]16:70519121]A\t15\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AGGATTTGCATTTCT;MAPQ=60;MATEID=769901:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_16_70511001_70536001_3C;SPAN=306;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:7:27:15.5:15.5,0,51.8:5:4:-15.52:16.64\n16\t72122752\t770476:1\tC\tC[16:72212287[\t46\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=C;MAPQ=60;MATEID=770476:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_16_72201501_72226501_29C;SPAN=89535;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:16:22:7.1:46.7,0,7.1:9:9:-48.1:48.1\n16\t72212287\t770476:2\tC\t]16:72122752]C\t46\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=C;MAPQ=60;MATEID=770476:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_16_72201501_72226501_29C;SPAN=89535;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:16:22:7.1:46.7,0,7.1:9:9:-48.1:48.1\n16\t74811117\t771521:2\tG\t]7:20669897]G\t26\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=771521:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:20669897(+)-16:74811117(-)__16_74798501_74823501D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:37:26:26,0,65.6:0:11:-25.91:26.93\n16\t78122363\t772813:1\tT\t]16:78137583]T\t16\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=772813:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_16_78130501_78155501_79C;SPAN=15220;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:35:16.7:16.7,0,69.5:8:0:-16.57:18.51\n16\t78137583\t772813:2\tT\tT[16:78122363[\t16\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=772813:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_16_78130501_78155501_79C;SPAN=15220;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:35:16.7:16.7,0,69.5:8:0:-16.57:18.51\n16\t78199550\t772890:1\tC\tC[16:78326597[\t19\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=CTC;MAPQ=60;MATEID=772890:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_16_78326501_78351501_127C;SPAN=127047;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:7:4:1.8:19.8,1.8,0:6:5:-19.8:19.8\n16\t78326597\t772890:2\tC\t]16:78199550]C\t19\tPASS\tDISC_MAPQ=51;EVDNC=ASDIS;HOMSEQ=CTC;MAPQ=60;MATEID=772890:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_16_78326501_78351501_127C;SPAN=127047;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:7:4:1.8:19.8,1.8,0:6:5:-19.8:19.8\n16\t78340090\t772941:1\tT\tT[16:78456846[\t27\tPASS\tDISC_MAPQ=56;EVDNC=DSCRD;IMPRECISE;MAPQ=56;MATEID=772941:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=16:78340090(+)-16:78456846(-)__16_78449001_78474001D;SPAN=116756;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:30:27.8:27.8,0,47.6:0:11:-27.88:28.16\n16\t78456846\t772941:2\tA\t]16:78340090]A\t27\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=772941:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=16:78340090(+)-16:78456846(-)__16_78449001_78474001D;SPAN=116756;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:30:27.8:27.8,0,47.6:0:11:-27.88:28.16\n16\t81140260\t774106:1\tC\tC[16:81140740[\t99\tPASS\tDISC_MAPQ=58;EVDNC=ASDIS;HOMSEQ=GGAGGCAGAGGTTGCAGTGAGCCGAGATC;MAPQ=60;MATEID=774106:2;MATENM=0;NM=8;NUMPARTS=2;SCTG=c_16_81119501_81144501_135C;SPAN=480;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:56:16:15.6:171.6,15.6,0:33:26:-171.6:171.6\n16\t81140740\t774106:2\tG\t]16:81140260]G\t99\tPASS\tDISC_MAPQ=57;EVDNC=ASDIS;HOMSEQ=GGAGGCAGAGGTTGCAGTGAGCCGAGATC;MAPQ=60;MATEID=774106:1;MATENM=8;NM=0;NUMPARTS=2;SCTG=c_16_81119501_81144501_135C;SPAN=480;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:56:16:15.6:171.6,15.6,0:33:26:-171.6:171.6\n16\t81577137\t774271:1\tA\t]16:81578194]A\t17\tPASS\tDISC_MAPQ=27;EVDNC=DSCRD;IMPRECISE;MAPQ=27;MATEID=774271:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=16:81577137(-)-16:81578194(+)__16_81560501_81585501D;SPAN=1057;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:55:17.6:17.6,0,119.9:0:10:-17.55:22.02\n16\t81578194\t774271:2\tT\tT[16:81577137[\t17\tPASS\tDISC_MAPQ=16;EVDNC=DSCRD;IMPRECISE;MAPQ=16;MATEID=774271:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=16:81577137(-)-16:81578194(+)__16_81560501_81585501D;SPAN=1057;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:55:17.6:17.6,0,119.9:0:10:-17.55:22.02\n16\t81765054\t774339:1\tC\t]16:81765621]C\t99\tPASS\tEVDNC=ASSMB;HOMSEQ=CTCCAGCCTGGGTGACAGAGTGAGA;MAPQ=60;MATEID=774339:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_16_81756501_81781501_97C;SPAN=567;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:53:90:77:149.6,0,77:53:0:-150.9:150.9\n16\t81765621\t774339:2\tA\tA[16:81765054[\t99\tPASS\tEVDNC=ASSMB;HOMSEQ=CTCCAGCCTGGGTGACAGAGTGAGA;MAPQ=60;MATEID=774339:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_16_81756501_81781501_97C;SPAN=567;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:53:90:77:149.6,0,77:53:0:-150.9:150.9\n16\t82757477\t774754:1\tA\t]16:82757614]A\t47\tPASS\tEVDNC=ASSMB;HOMSEQ=A;MAPQ=60;MATEID=774754:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_16_82736501_82761501_24C;SPAN=137;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:18:43:47.3:47.3,0,60.5:18:0:-47.33:47.43\n16\t82757614\t774754:2\tA\tA[16:82757477[\t47\tPASS\tEVDNC=ASSMB;HOMSEQ=A;MAPQ=60;MATEID=774754:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_16_82736501_82761501_24C;SPAN=137;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:18:43:47.3:47.3,0,60.5:18:0:-47.33:47.43\n16\t84336396\t775449:1\tC\tC[16:84336829[\t0\tPASS\tEVDNC=ASSMB;HOMSEQ=GATCACGCCATTGCACTCCAGCCTGGGC;MAPQ=60;MATEID=775449:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_16_84329001_84354001_39C;SPAN=433;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/0:4:52:1.2:0,1.2,132:4:0:1.413:7.213\n16\t84336829\t775449:2\tG\t]16:84336396]G\t0\tPASS\tEVDNC=ASSMB;HOMSEQ=GATCACGCCATTGCACTCCAGCCTGGGC;MAPQ=60;MATEID=775449:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_16_84329001_84354001_39C;SPAN=433;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/0:4:52:1.2:0,1.2,132:4:0:1.413:7.213\n16\t84467832\t775519:1\tC\tC[16:84470510[\t26\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;INSERTION=CAGCTGCCCCAGGATGGACC;MAPQ=60;MATEID=775519:2;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_16_84451501_84476501_186C;SPAN=2678;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:36:26.3:26.3,0,62.6:10:3:-26.19:27.08\n16\t84470510\t775519:2\tC\t]16:84467832]C\t26\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;INSERTION=CAGCTGCCCCAGGATGGACC;MAPQ=60;MATEID=775519:1;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_16_84451501_84476501_186C;SPAN=2678;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:36:26.3:26.3,0,62.6:10:3:-26.19:27.08\n16\t85115938\t775803:1\tG\tG[16:85116470[\t58\tPASS\tDISC_MAPQ=58;EVDNC=ASDIS;HOMSEQ=GACCTCAGGTGATCTGCCCACCTCGGCCTCCCAAAGTGCTGGGATTACAGGCATGAG;MAPQ=60;MATEID=775803:2;MATENM=0;NM=4;NUMPARTS=2;SCTG=c_16_85113001_85138001_101C;SPAN=532;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:20:28:11.9:58.1,0,11.9:7:16:-59.83:59.83\n16\t85116470\t775803:2\tG\t]16:85115938]G\t58\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=GACCTCAGGTGATCTGCCCACCTCGGCCTCCCAAAGTGCTGGGATTACAGGCATGAG;MAPQ=60;MATEID=775803:1;MATENM=4;NM=0;NUMPARTS=2;SCTG=c_16_85113001_85138001_101C;SPAN=532;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:20:28:11.9:58.1,0,11.9:7:16:-59.83:59.83\n16\t85155108\t775824:1\tT\t[16:85156196[T\t99\tPASS\tDISC_MAPQ=56;EVDNC=ASDIS;HOMSEQ=TGG;MAPQ=60;MATEID=775824:2;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_16_85137501_85162501_132C;SPAN=1088;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:44:41:12.3:135.3,12.3,0:25:31:-135.3:135.3\n16\t85156196\t775824:2\tC\t[16:85155108[C\t99\tPASS\tDISC_MAPQ=57;EVDNC=ASDIS;HOMSEQ=TGG;MAPQ=60;MATEID=775824:1;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_16_85137501_85162501_132C;SPAN=1088;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:44:41:12.3:135.3,12.3,0:25:31:-135.3:135.3\n16\t85268887\t775861:1\tG\tG[16:85270785[\t50\tPASS\tEVDNC=ASSMB;HOMSEQ=GG;MAPQ=60;MATEID=775861:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_16_85260001_85285001_111C;SPAN=1898;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:19:44:50.3:50.3,0,60.2:19:0:-50.35:50.4\n16\t85270785\t775861:2\tG\t]16:85268887]G\t50\tPASS\tEVDNC=ASSMB;HOMSEQ=GG;MAPQ=60;MATEID=775861:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_16_85260001_85285001_111C;SPAN=1898;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:19:44:50.3:50.3,0,60.2:19:0:-50.35:50.4\n16\t86250715\t776364:1\tT\tT[16:86251011[\t59\tPASS\tEVDNC=ASSMB;HOMSEQ=CTCCTGAATTCTT;MAPQ=60;MATEID=776364:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_16_86240001_86265001_113C;SPAN=296;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:21:36:29.6:59.3,0,29.6:21:0:-59.66:59.66\n16\t86251011\t776364:2\tC\t]16:86250715]C\t59\tPASS\tEVDNC=ASSMB;HOMSEQ=CTCCTGAATTCTT;MAPQ=60;MATEID=776364:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_16_86240001_86265001_113C;SPAN=296;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:21:36:29.6:59.3,0,29.6:21:0:-59.66:59.66\n16\t87502284\t776954:1\tC\t]16:87502875]C\t15\tPASS\tDISC_MAPQ=39;EVDNC=DSCRD;IMPRECISE;MAPQ=39;MATEID=776954:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=16:87502284(-)-16:87502875(+)__16_87489501_87514501D;SPAN=591;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:62:15.8:15.8,0,137.9:0:10:-15.58:21.45\n16\t87502875\t776954:2\tT\tT[16:87502284[\t15\tPASS\tDISC_MAPQ=20;EVDNC=DSCRD;IMPRECISE;MAPQ=20;MATEID=776954:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=16:87502284(-)-16:87502875(+)__16_87489501_87514501D;SPAN=591;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:62:15.8:15.8,0,137.9:0:10:-15.58:21.45\n16\t88053093\t777152:1\tT\t]16:88053862]T\t78\tPASS\tEVDNC=ASSMB;HOMSEQ=TAACAACCACTACCACCCCCACCTCC;MAPQ=60;MATEID=777152:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_16_88053001_88078001_33C;SPAN=769;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:28:50:45.5:78.5,0,45.5:28:0:-78.78:78.78\n16\t88053862\t777152:2\tC\tC[16:88053093[\t78\tPASS\tEVDNC=ASSMB;HOMSEQ=TAACAACCACTACCACCCCCACCTCC;MAPQ=60;MATEID=777152:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_16_88053001_88078001_33C;SPAN=769;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:28:50:45.5:78.5,0,45.5:28:0:-78.78:78.78\n16\t88079246\t777183:1\tC\tC[16:88082061[\t99\tPASS\tDISC_MAPQ=56;EVDNC=DSCRD;IMPRECISE;MAPQ=56;MATEID=777183:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=16:88079246(+)-16:88082061(-)__16_88077501_88102501D;SPAN=2815;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:41:8:11.4:125.4,11.4,0:0:41:-125.4:125.4\n16\t88082061\t777183:2\tC\t]16:88079246]C\t99\tPASS\tDISC_MAPQ=56;EVDNC=DSCRD;IMPRECISE;MAPQ=56;MATEID=777183:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=16:88079246(+)-16:88082061(-)__16_88077501_88102501D;SPAN=2815;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:41:8:11.4:125.4,11.4,0:0:41:-125.4:125.4\n16\t89167027\t777836:1\tG\t]16:89259977]G\t24\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=777836:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_16_89253501_89278501_12C;SPAN=92950;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:30:24.5:24.5,0,50.9:10:0:-24.58:25.08\n16\t89259977\t777836:2\tT\tT[16:89167027[\t24\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=777836:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_16_89253501_89278501_12C;SPAN=92950;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:30:24.5:24.5,0,50.9:10:0:-24.58:25.08\n16\t90040651\t778139:1\tC\tC[Un_JTFH01000108v1_decoy:1[\t69\tPASS\tEVDNC=ASSMB;HOMSEQ=GTGGGTTTCCTGTGGCC;MAPQ=60;MATEID=778139:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_16_90037501_90062501_109C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:23:19:6.3:69.3,6.3,0:23:0:-69.32:69.32\n16\t90040651\t995643:1\tC\tC[Un_JTFH01000108v1_decoy:1[\t79\tPASS\tEVDNC=ASSMB;HOMSEQ=GTGGGTTTCCTGTGGCC;INSERTION=ACCCAGCCACAGATGGCATTTTTTTTTTTGTAAATTATTTT;MAPQ=60;MATEID=995643:2;MATENM=1;NM=1;NUMPARTS=6;SCTG=c_951_1_3374_2C;SECONDARY;SPAN=-1;SUBN=6;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:26:6:7.2:79.2,7.2,0:26:0:-79.22:79.22\n17\t494760\t778350:1\tG\t[17:495848[G\t22\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=GT;MAPQ=60;MATEID=778350:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_17_490001_515001_67C;SPAN=1088;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:26:22.4:22.4,0,42.2:4:8:-22.4:22.76\n17\t495848\t778350:2\tA\t[17:494760[A\t22\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=GT;MAPQ=60;MATEID=778350:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_17_490001_515001_67C;SPAN=1088;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:26:22.4:22.4,0,42.2:4:8:-22.4:22.76\n17\t497801\t148404:2\tT\tT[2:237561091[\t21\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TT;MAPQ=60;MATEID=148404:1;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_2_237552001_237577001_84C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:41:21.5:21.5,0,80.9:7:6:-21.49:23.47\n17\t645848\t778404:1\tA\tA[17:646775[\t82\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=GACTGGAGATAGGCTCCCACACACATCTCCGTGACTGCGTGGCCACTGCCTCCTAAGGGTCTTATCTTTTCTAATCCATATCACGGACTGGAGA;MAPQ=60;MATEID=778404:2;MATENM=2;NM=2;NUMPARTS=2;SCTG=c_17_637001_662001_78C;SPAN=927;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:27:19:7.5:82.5,7.5,0:5:23:-82.52:82.52\n17\t646775\t778404:2\tG\t]17:645848]G\t82\tPASS\tDISC_MAPQ=55;EVDNC=ASDIS;HOMSEQ=GACTGGAGATAGGCTCCCACACACATCTCCGTGACTGCGTGGCCACTGCCTCCTAAGGGTCTTATCTTTTCTAATCCATATCACGGACTGGAGA;MAPQ=60;MATEID=778404:1;MATENM=2;NM=2;NUMPARTS=2;SCTG=c_17_637001_662001_78C;SPAN=927;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:27:19:7.5:82.5,7.5,0:5:23:-82.52:82.52\n17\t820619\t778462:1\tA\tA[17:821646[\t46\tPASS\tDISC_MAPQ=50;EVDNC=ASDIS;HOMSEQ=GAGGCTGAGGCAGGAGAATGACGTGAACCCAGGAGGCGGAGCTTGCAGTGAGCCGAGATCGCACCACTGCACCCCAGCCTGGGCGACAGAGCGAGACTCTGTCTCAAAAAAAA;MAPQ=60;MATEID=778462:2;MATENM=5;NM=7;NUMPARTS=2;SCTG=c_17_808501_833501_85C;SPAN=1027;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:16:6:4.2:46.2,4.2,0:2:14:-46.21:46.21\n17\t821646\t778462:2\tG\t]17:820619]G\t46\tPASS\tDISC_MAPQ=59;EVDNC=ASDIS;HOMSEQ=GAGGCTGAGGCAGGAGAATGACGTGAACCCAGGAGGCGGAGCTTGCAGTGAGCCGAGATCGCACCACTGCACCCCAGCCTGGGCGACAGAGCGAGACTCTGTCTCAAAAAAAA;MAPQ=60;MATEID=778462:1;MATENM=7;NM=5;NUMPARTS=2;SCTG=c_17_808501_833501_85C;SPAN=1027;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:16:6:4.2:46.2,4.2,0:2:14:-46.21:46.21\n17\t898386\t778509:1\tT\tT[17:899018[\t89\tPASS\tEVDNC=ASSMB;INSERTION=GGTAAAGCTCTGTCACCCAGGCTGGAGTGCAGCGC;MAPQ=58;MATEID=778509:2;MATENM=2;NM=1;NUMPARTS=2;SCTG=c_17_882001_907001_3C;SPAN=632;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:29:13:8.1:89.1,8.1,0:29:0:-89.12:89.12\n17\t899018\t778509:2\tC\t]17:898386]C\t89\tPASS\tEVDNC=ASSMB;INSERTION=GGTAAAGCTCTGTCACCCAGGCTGGAGTGCAGCGC;MAPQ=58;MATEID=778509:1;MATENM=1;NM=2;NUMPARTS=2;SCTG=c_17_882001_907001_3C;SPAN=632;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:29:13:8.1:89.1,8.1,0:29:0:-89.12:89.12\n17\t2816636\t779292:1\tT\tT[17:2817924[\t33\tPASS\tEVDNC=ASSMB;HOMSEQ=CT;MAPQ=60;MATEID=779292:2;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_17_2817501_2842501_63C;SPAN=1288;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:11:6:3:33,3,0:11:0:-33.01:33.01\n17\t2817924\t779292:2\tC\t]17:2816636]C\t33\tPASS\tEVDNC=ASSMB;HOMSEQ=CT;MAPQ=60;MATEID=779292:1;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_17_2817501_2842501_63C;SPAN=1288;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:11:6:3:33,3,0:11:0:-33.01:33.01\n17\t6030297\t780488:1\tC\tC[17:6030604[\t36\tPASS\tEVDNC=ASSMB;HOMSEQ=CAGCCATTTTC;MAPQ=60;MATEID=780488:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_17_6027001_6052001_69C;SPAN=307;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:12:14:0.6:36.3,0.6,0:12:0:-38:38\n17\t6030604\t780488:2\tC\t]17:6030297]C\t36\tPASS\tEVDNC=ASSMB;HOMSEQ=CAGCCATTTTC;MAPQ=60;MATEID=780488:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_17_6027001_6052001_69C;SPAN=307;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:12:14:0.6:36.3,0.6,0:12:0:-38:38\n17\t8032539\t781221:1\tA\t]17:8232148]A\t32\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;INSERTION=AGTC;MAPQ=60;MATEID=781221:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_17_8232001_8257001_59C;SPAN=199609;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:16:5.6:32,0,5.6:7:9:-32.57:32.57\n17\t8232148\t781221:2\tT\tT[17:8032539[\t32\tPASS\tDISC_MAPQ=58;EVDNC=ASDIS;INSERTION=AGTC;MAPQ=60;MATEID=781221:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_17_8232001_8257001_59C;SPAN=199609;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:16:5.6:32,0,5.6:7:9:-32.57:32.57\n17\t8343327\t781263:1\tT\tT[17:8344651[\t39\tPASS\tEVDNC=ASSMB;HOMSEQ=GCTAATTTTTGTATTTTTAGTAGAGACGGGGTTT;MAPQ=60;MATEID=781263:2;MATENM=0;NM=4;NUMPARTS=2;SCTG=c_17_8330001_8355001_52C;SPAN=1324;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:13:13:3.6:39.6,3.6,0:13:0:-39.61:39.61\n17\t8344651\t781263:2\tG\t]17:8343327]G\t39\tPASS\tEVDNC=ASSMB;HOMSEQ=GCTAATTTTTGTATTTTTAGTAGAGACGGGGTTT;MAPQ=60;MATEID=781263:1;MATENM=4;NM=0;NUMPARTS=2;SCTG=c_17_8330001_8355001_52C;SPAN=1324;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:13:13:3.6:39.6,3.6,0:13:0:-39.61:39.61\n17\t10235400\t781898:2\tT\t]11:37407661]T\t33\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;MAPQ=60;MATEID=781898:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_17_10216501_10241501_78C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:11:11:3:33,3,0:9:5:-33.01:33.01\n17\t10300117\t781917:1\tA\tA[17:10300455[\t13\tPASS\tEVDNC=ASSMB;HOMSEQ=AAGATCCTGATTCA;MAPQ=60;MATEID=781917:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_17_10290001_10315001_20C;SPAN=338;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:58:13.4:13.4,0,132.2:9:0:-13.41:19.14\n17\t10300455\t781917:2\tA\t]17:10300117]A\t13\tPASS\tEVDNC=ASSMB;HOMSEQ=AAGATCCTGATTCA;MAPQ=60;MATEID=781917:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_17_10290001_10315001_20C;SPAN=338;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:58:13.4:13.4,0,132.2:9:0:-13.41:19.14\n17\t13317181\t782920:1\tT\tT[17:13317488[\t12\tPASS\tEVDNC=ASSMB;HOMSEQ=AAGGGTAAAGACAGAATCTTT;MAPQ=60;MATEID=782920:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_17_13303501_13328501_142C;SPAN=307;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:5:16:12.2:12.2,0,25.4:5:0:-12.01:12.37\n17\t13317488\t782920:2\tA\t]17:13317181]A\t12\tPASS\tEVDNC=ASSMB;HOMSEQ=AAGGGTAAAGACAGAATCTTT;MAPQ=60;MATEID=782920:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_17_13303501_13328501_142C;SPAN=307;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:5:16:12.2:12.2,0,25.4:5:0:-12.01:12.37\n17\t13628399\t783024:1\tG\tG[17:13629377[\t46\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TGTAATCCCAGCACTTTGGGAGACTGAGGCGGG;MAPQ=60;MATEID=783024:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_17_13622001_13647001_14C;SPAN=978;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:15:10:4.2:46.2,4.2,0:8:8:-46.21:46.21\n17\t13629377\t783024:2\tT\t]17:13628399]T\t46\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TGTAATCCCAGCACTTTGGGAGACTGAGGCGGG;MAPQ=60;MATEID=783024:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_17_13622001_13647001_14C;SPAN=978;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:15:10:4.2:46.2,4.2,0:8:8:-46.21:46.21\n17\t13801243\t783109:1\tT\tT[17:13801517[\t66\tPASS\tEVDNC=ASSMB;HOMSEQ=GCATATATGTATTCTT;MAPQ=60;MATEID=783109:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_17_13793501_13818501_4C;SPAN=274;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:22:12:6:66,6,0:22:0:-66.02:66.02\n17\t13801517\t783109:2\tG\t]17:13801243]G\t66\tPASS\tEVDNC=ASSMB;HOMSEQ=GCATATATGTATTCTT;MAPQ=60;MATEID=783109:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_17_13793501_13818501_4C;SPAN=274;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:22:12:6:66,6,0:22:0:-66.02:66.02\n17\t14286594\t783261:1\tA\tA[17:14288239[\t79\tPASS\tEVDNC=ASSMB;HOMSEQ=A;MAPQ=60;MATEID=783261:2;MATENM=1;NM=9;NUMPARTS=2;SCTG=c_17_14283501_14308501_0C;SPAN=1645;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:26:15:7.2:79.2,7.2,0:26:0:-79.22:79.22\n17\t14288239\t783261:2\tA\t]17:14286594]A\t79\tPASS\tEVDNC=ASSMB;HOMSEQ=A;MAPQ=60;MATEID=783261:1;MATENM=9;NM=1;NUMPARTS=2;SCTG=c_17_14283501_14308501_0C;SPAN=1645;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:26:15:7.2:79.2,7.2,0:26:0:-79.22:79.22\n17\t15886244\t783823:1\tT\tT[17:15890467[\t59\tPASS\tEVDNC=ASSMB;HOMSEQ=T;MAPQ=60;MATEID=783823:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_17_15876001_15901001_41C;SPAN=4223;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:20:19:5.4:59.4,5.4,0:20:0:-59.41:59.41\n17\t15890467\t783823:2\tT\t]17:15886244]T\t59\tPASS\tEVDNC=ASSMB;HOMSEQ=T;MAPQ=60;MATEID=783823:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_17_15876001_15901001_41C;SPAN=4223;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:20:19:5.4:59.4,5.4,0:20:0:-59.41:59.41\n17\t17252333\t784312:1\tC\t]17:17252470]C\t80\tPASS\tEVDNC=ASSMB;INSERTION=TACAGATAACGCTTTGGTGTGTGGGCTCTCCTGGGTA;MAPQ=60;MATEID=784312:2;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_17_17248001_17273001_6C;SPAN=137;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:28:41:21.5:80.9,0,21.5:28:0:-82.75:82.75\n17\t17252470\t784312:2\tG\tG[17:17252333[\t80\tPASS\tEVDNC=ASSMB;INSERTION=TACAGATAACGCTTTGGTGTGTGGGCTCTCCTGGGTA;MAPQ=60;MATEID=784312:1;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_17_17248001_17273001_6C;SPAN=137;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:28:41:21.5:80.9,0,21.5:28:0:-82.75:82.75\n17\t18887840\t784783:1\tT\tT[17:18888851[\t56\tPASS\tEVDNC=ASSMB;HOMSEQ=AACTTGTTCTTTCTT;MAPQ=60;MATEID=784783:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_17_18865001_18890001_110C;SPAN=1011;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:19:16:5.1:56.1,5.1,0:19:0:-56.11:56.11\n17\t18888851\t784783:2\tA\t]17:18887840]A\t56\tPASS\tEVDNC=ASSMB;HOMSEQ=AACTTGTTCTTTCTT;MAPQ=60;MATEID=784783:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_17_18865001_18890001_110C;SPAN=1011;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:19:16:5.1:56.1,5.1,0:19:0:-56.11:56.11\n17\t19013598\t784832:1\tT\tT]Un_KN707952v1_decoy:1383]\t46\tPASS\tEVDNC=ASSMB;HOMSEQ=CATGGGGACTGTGGAGGCT;MAPQ=60;MATEID=784832:2;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_17_19012001_19037001_17C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:16:5:4.2:46.2,4.2,0:16:0:-46.21:46.21\n17\t19640120\t784942:1\tT\tT[17:19640413[\t36\tPASS\tEVDNC=ASSMB;HOMSEQ=AATAATAAAAATGCCT;MAPQ=60;MATEID=784942:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_17_19624501_19649501_32C;SPAN=293;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:15:45:36.8:36.8,0,76.4:15:0:-36.87:37.63\n17\t19640413\t784942:2\tA\t]17:19640120]A\t36\tPASS\tEVDNC=ASSMB;HOMSEQ=AATAATAAAAATGCCT;MAPQ=60;MATEID=784942:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_17_19624501_19649501_32C;SPAN=293;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:15:45:36.8:36.8,0,76.4:15:0:-36.87:37.63\n17\t19668598\t784951:1\tT\tT[17:19669008[\t62\tPASS\tEVDNC=ASSMB;HOMSEQ=T;MAPQ=60;MATEID=784951:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_17_19649001_19674001_55C;SPAN=410;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:21:17:5.7:62.7,5.7,0:21:0:-62.72:62.72\n17\t19669008\t784951:2\tT\t]17:19668598]T\t62\tPASS\tEVDNC=ASSMB;HOMSEQ=T;MAPQ=60;MATEID=784951:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_17_19649001_19674001_55C;SPAN=410;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:21:17:5.7:62.7,5.7,0:21:0:-62.72:62.72\n17\t19919536\t785033:2\tT\t]10:132056598]T\t22\tPASS\tDISC_MAPQ=51;EVDNC=DSCRD;IMPRECISE;MAPQ=51;MATEID=785033:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=10:132056598(+)-17:19919536(-)__17_19918501_19943501D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:13:9.5:22.7,0,9.5:0:8:-23.02:23.02\n17\t21317871\t785842:1\tT\t[17:21778359[T\t42\tPASS\tDISC_MAPQ=30;EVDNC=ASDIS;HOMSEQ=T;MAPQ=36;MATEID=785842:2;MATENM=20;NM=4;NUMPARTS=2;SCTG=c_17_21756001_21781001_18C;SPAN=460488;SUBN=1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:14:17:1.2:42.9,1.2,0:12:4:-43.71:43.71\n17\t21427160\t785785:1\tA\tA[17:21713088[\t24\tPASS\tDISC_MAPQ=28;EVDNC=DSCRD;IMPRECISE;MAPQ=28;MATEID=785785:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=17:21427160(+)-17:21713088(-)__17_21707001_21732001D;SPAN=285928;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:19:21.2:24.5,0,21.2:0:9:-24.37:24.37\n17\t21713088\t785785:2\tA\t]17:21427160]A\t24\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=785785:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=17:21427160(+)-17:21713088(-)__17_21707001_21732001D;SPAN=285928;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:19:21.2:24.5,0,21.2:0:9:-24.37:24.37\n17\t21778359\t785842:2\tA\t[17:21317871[A\t42\tPASS\tDISC_MAPQ=8;EVDNC=ASDIS;HOMSEQ=T;MAPQ=24;MATEID=785842:1;MATENM=4;NM=20;NUMPARTS=2;SCTG=c_17_21756001_21781001_18C;SPAN=460488;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:14:17:1.2:42.9,1.2,0:12:4:-43.71:43.71\n17\t21814103\t785911:2\tN\t]7:63016535]N\t59\tPASS\tDISC_MAPQ=53;EVDNC=DSCRD;IMPRECISE;MAPQ=53;MATEID=785911:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:63016535(+)-17:21814103(-)__17_21805001_21830001D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:20:5:5.4:59.4,5.4,0:0:20:-59.41:59.41\n17\t21884550\t787008:1\tT\tT[17:21987760[\t31\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=ATGGAATGGAATTGAATGGAATGGAAT;MAPQ=60;MATEID=787008:2;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_17_21878501_21903501_214C;SPAN=103210;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:41:31.4:31.4,0,71:8:6:-31.39:32.26\n17\t21920248\t801378:1\tA\tA[17:26877289[\t9\tPASS\tDISC_MAPQ=29;EVDNC=DSCRD;IMPRECISE;MAPQ=29;MATEID=801378:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=17:21920248(+)-17:26877289(-)__17_26876501_26901501D;SPAN=4957041;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:83:9.8:9.8,0,197.9:0:10:-9.679:20.08\n17\t21950588\t788019:1\tT\t]17:21950746]T\t16\tPASS\tEVDNC=ASSMB;HOMSEQ=TGGAATGGA;MAPQ=60;MATEID=788019:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_17_21927501_21952501_14C;SPAN=158;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:15:118:16.4:16.4,0,280.4:15:0:-16.35:30.49\n17\t21950746\t788019:2\tA\tA[17:21950588[\t16\tPASS\tEVDNC=ASSMB;HOMSEQ=TGGAATGGA;MAPQ=60;MATEID=788019:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_17_21927501_21952501_14C;SPAN=158;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:15:118:16.4:16.4,0,280.4:15:0:-16.35:30.49\n17\t21987760\t787008:2\tA\t]17:21884550]A\t31\tPASS\tDISC_MAPQ=255;EVDNC=ASDIS;HOMSEQ=ATGGAATGGAATTGAATGGAATGGAAT;MAPQ=60;MATEID=787008:1;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_17_21878501_21903501_214C;SPAN=103210;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:41:31.4:31.4,0,71:8:6:-31.39:32.26\n17\t22877406\t788665:1\tG\t]17:23183141]G\t19\tPASS\tDISC_MAPQ=20;EVDNC=DSCRD;IMPRECISE;MAPQ=20;MATEID=788665:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=17:22877406(-)-17:23183141(+)__17_23177001_23202001D;SPAN=305735;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:25:19.4:19.4,0,42.5:0:8:-19.38:19.89\n17\t23183141\t788665:2\tC\tC[17:22877406[\t19\tPASS\tDISC_MAPQ=17;EVDNC=DSCRD;IMPRECISE;MAPQ=17;MATEID=788665:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=17:22877406(-)-17:23183141(+)__17_23177001_23202001D;SPAN=305735;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:25:19.4:19.4,0,42.5:0:8:-19.38:19.89\n17\t23483975\t789767:1\tA\t]17:23484332]A\t99\tPASS\tDISC_MAPQ=19;EVDNC=ASDIS;HOMSEQ=AGAAGCCTTCTCAGAAA;MAPQ=13;MATEID=789767:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_17_23471001_23496001_74C;SPAN=357;SUBN=2;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:36:12:9.9:108.9,9.9,0:30:8:-108.9:108.9\n17\t23484332\t789767:2\tA\tA[17:23483975[\t99\tPASS\tDISC_MAPQ=16;EVDNC=ASDIS;HOMSEQ=AGAAGCCTTCTCAGAAA;MAPQ=39;MATEID=789767:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_17_23471001_23496001_74C;SPAN=357;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:36:12:9.9:108.9,9.9,0:30:8:-108.9:108.9\n17\t24946097\t793752:1\tA\t]17:24946925]A\t26\tPASS\tDISC_MAPQ=22;EVDNC=DSCRD;IMPRECISE;MAPQ=22;MATEID=793752:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=17:24946097(-)-17:24946925(+)__17_24941001_24966001D;SPAN=828;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:9:6:2.4:26.4,2.4,0:0:9:-26.41:26.41\n17\t24946925\t793752:2\tT\tT[17:24946097[\t26\tPASS\tDISC_MAPQ=19;EVDNC=DSCRD;IMPRECISE;MAPQ=19;MATEID=793752:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=17:24946097(-)-17:24946925(+)__17_24941001_24966001D;SPAN=828;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:9:6:2.4:26.4,2.4,0:0:9:-26.41:26.41\n17\t25237545\t794573:1\tG\t]17:26590930]G\t23\tPASS\tDISC_MAPQ=47;EVDNC=DSCRD;IMPRECISE;MAPQ=47;MATEID=794573:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=17:25237545(-)-17:26590930(+)__17_25235001_25260001D;SPAN=1353385;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:8:6:2.1:23.1,2.1,0:0:8:-23.11:23.11\n17\t25539213\t796561:1\tA\t]17:25539559]A\t99\tPASS\tDISC_MAPQ=255;EVDNC=TSI_L;HOMSEQ=AGCATTC;MAPQ=60;MATEID=796561:2;MATENM=0;NM=0;NUMPARTS=3;SCTG=c_17_25872001_25897001_85C;SPAN=346;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:40:0:11.1:122.1,11.1,0:40:0:-122.1:122.1\n17\t25539559\t796561:2\tC\tC[17:25539213[\t99\tPASS\tDISC_MAPQ=255;EVDNC=TSI_L;HOMSEQ=AGCATTC;MAPQ=28;MATEID=796561:1;MATENM=0;NM=0;NUMPARTS=3;SCTG=c_17_25872001_25897001_85C;SPAN=346;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:40:0:11.1:122.1,11.1,0:40:0:-122.1:122.1\n17\t25637287\t795758:1\tA\t]17:25637632]A\t99\tPASS\tDISC_MAPQ=2;EVDNC=ASDIS;HOMSEQ=AGCATTC;MAPQ=19;MATEID=795758:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_17_25627001_25652001_95C;SPAN=345;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:63:80:14:185.6,0,14:60:3:-193.9:193.9\n17\t25637632\t795758:2\tC\tC[17:25637287[\t99\tPASS\tDISC_MAPQ=21;EVDNC=ASDIS;HOMSEQ=AGCATTC;MAPQ=40;MATEID=795758:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_17_25627001_25652001_95C;SPAN=345;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:63:80:14:185.6,0,14:60:3:-193.9:193.9\n17\t26256377\t798613:1\tA\tA[17:26476143[\t29\tPASS\tDISC_MAPQ=15;EVDNC=DSCRD;IMPRECISE;MAPQ=15;MATEID=798613:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=17:26256377(+)-17:26476143(-)__17_26460001_26485001D;SPAN=219766;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:10:3:2.7:29.7,2.7,0:0:10:-29.71:29.71\n17\t26476143\t798613:2\tG\t]17:26256377]G\t29\tPASS\tDISC_MAPQ=18;EVDNC=DSCRD;IMPRECISE;MAPQ=18;MATEID=798613:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=17:26256377(+)-17:26476143(-)__17_26460001_26485001D;SPAN=219766;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:10:3:2.7:29.7,2.7,0:0:10:-29.71:29.71\n17\t26590930\t794573:2\tA\tA[17:25237545[\t23\tPASS\tDISC_MAPQ=28;EVDNC=DSCRD;IMPRECISE;MAPQ=28;MATEID=794573:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=17:25237545(-)-17:26590930(+)__17_25235001_25260001D;SPAN=1353385;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:8:6:2.1:23.1,2.1,0:0:8:-23.11:23.11\n17\t26640334\t798950:1\tT\tT[17:26640621[\t89\tPASS\tDISC_MAPQ=255;EVDNC=TSI_L;INSERTION=GTAGAATCTGCAGGTGGACATTTGGGGCGCTTTGAGGCCAATGGAGAAAAAGGAAATCTCTTCACGTAAAAGCTATACAGAAGCATTCTCAGAAACTTCTTTGTGATATGTGCATTCAACTCACAGAATTGAACATTTTTTTTCATAGAGCAGATTTGAAACACTCTGTTGAATTTGCAAGTGGATATTTGGACGGCTTAGAGGCCTTTGTTGGAAACAAGGTATCTTCACATAAAAGCTAGACAGAAGCATTCTCAGAAGCTACTTTGTGATGTGTGCATTCAACTCACAGAGTTGAACCTTTCTTTTGATAGG;MAPQ=60;MATEID=798950:2;MATENM=0;NM=0;NUMPARTS=5;REPSEQ=TTTTT;SCTG=c_17_26631501_26656501_88C;SPAN=287;SUBN=3;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:33:6:9:89.9,9,0:33:0:-89.99:89.99\n17\t26640621\t798950:2\tA\t]17:26640334]A\t89\tPASS\tDISC_MAPQ=255;EVDNC=TSI_L;INSERTION=GTAGAATCTGCAGGTGGACATTTGGGGCGCTTTGAGGCCAATGGAGAAAAAGGAAATCTCTTCACGTAAAAGCTATACAGAAGCATTCTCAGAAACTTCTTTGTGATATGTGCATTCAACTCACAGAATTGAACATTTTTTTTCATAGAGCAGATTTGAAACACTCTGTTGAATTTGCAAGTGGATATTTGGACGGCTTAGAGGCCTTTGTTGGAAACAAGGTATCTTCACATAAAAGCTAGACAGAAGCATTCTCAGAAGCTACTTTGTGATGTGTGCATTCAACTCACAGAGTTGAACCTTTCTTTTGATAGG;MAPQ=60;MATEID=798950:1;MATENM=0;NM=0;NUMPARTS=5;REPSEQ=TTTTT;SCTG=c_17_26631501_26656501_88C;SPAN=287;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:33:6:9:89.9,9,0:33:0:-89.99:89.99\n17\t26657609\t798974:1\tA\tA[17:26683650[\t34\tPASS\tDISC_MAPQ=1;EVDNC=ASDIS;HOMSEQ=ACAGAAGCATTCTCAGAAACTTATTTGTGATGTGTGCATTCAACTCACAGAGTTGAACATTTCTTTTGACAGAGAAGTTTTGAAA;MAPQ=10;MATEID=798974:2;MATENM=6;NM=8;NUMPARTS=2;SCTG=c_17_26656001_26681001_40C;SPAN=26041;SUBN=1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:20:14.3:34.1,0,14.3:8:4:-34.32:34.32\n17\t26683650\t798974:2\tA\t]17:26657609]A\t34\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=ACAGAAGCATTCTCAGAAACTTATTTGTGATGTGTGCATTCAACTCACAGAGTTGAACATTTCTTTTGACAGAGAAGTTTTGAAA;MAPQ=60;MATEID=798974:1;MATENM=8;NM=6;NUMPARTS=2;SCTG=c_17_26656001_26681001_40C;SPAN=26041;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:20:14.3:34.1,0,14.3:8:4:-34.32:34.32\n17\t26701545\t798997:1\tA\t]17:26702093]A\t50\tPASS\tDISC_MAPQ=58;EVDNC=ASDIS;HOMSEQ=ATAGAGCAGTTTTGAAACACTCTTTTTGTAGAATCTG;MAPQ=60;MATEID=798997:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_17_26680501_26705501_20C;SPAN=548;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:18:30:24.5:50.9,0,24.5:9:16:-51.49:51.49\n17\t26702093\t798997:2\tG\tG[17:26701545[\t50\tPASS\tDISC_MAPQ=53;EVDNC=ASDIS;HOMSEQ=ATAGAGCAGTTTTGAAACACTCTTTTTGTAGAATCTG;MAPQ=60;MATEID=798997:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_17_26680501_26705501_20C;SPAN=548;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:18:30:24.5:50.9,0,24.5:9:16:-51.49:51.49\n17\t26843013\t800758:1\tA\tA[17:26846576[\t37\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=GAATGGAATGGACTCGAATGGAATGGACTGGAA;MAPQ=60;MATEID=800758:2;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_17_26827501_26852501_447C;SPAN=3563;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:19:89:37.7:37.7,0,186.2:8:16:-37.7:43.33\n17\t26846576\t800758:2\tG\t]17:26843013]G\t37\tPASS\tDISC_MAPQ=55;EVDNC=ASDIS;HOMSEQ=GAATGGAATGGACTCGAATGGAATGGACTGGAA;MAPQ=60;MATEID=800758:1;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_17_26827501_26852501_447C;SPAN=3563;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:19:89:37.7:37.7,0,186.2:8:16:-37.7:43.33\n17\t26877289\t801378:2\tA\t]17:21920248]A\t9\tPASS\tDISC_MAPQ=21;EVDNC=DSCRD;IMPRECISE;MAPQ=21;MATEID=801378:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=17:21920248(+)-17:26877289(-)__17_26876501_26901501D;SPAN=4957041;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:83:9.8:9.8,0,197.9:0:10:-9.679:20.08\n17\t27155352\t801818:1\tT\t]17:27164868]T\t34\tPASS\tDISC_MAPQ=52;EVDNC=ASDIS;HOMSEQ=TTTG;MAPQ=60;MATEID=801818:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_17_27146001_27171001_15C;SPAN=9516;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:20:14.3:34.1,0,14.3:7:8:-34.32:34.32\n17\t27164868\t801818:2\tG\tG[17:27155352[\t34\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TTTG;MAPQ=60;MATEID=801818:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_17_27146001_27171001_15C;SPAN=9516;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:20:14.3:34.1,0,14.3:7:8:-34.32:34.32\n17\t29271810\t802159:1\tC\t]17:29456121]C\t20\tPASS\tDISC_MAPQ=51;EVDNC=ASDIS;HOMSEQ=CCTGTAATCCCAGCACTTTGGGAGGCCAAGGCAGG;MAPQ=60;MATEID=802159:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_17_29449001_29474001_4C;SPAN=184311;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:7:11:6.8:20,0,6.8:6:4:-20.32:20.32\n17\t29456121\t802159:2\tG\tG[17:29271810[\t20\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=CCTGTAATCCCAGCACTTTGGGAGGCCAAGGCAGG;MAPQ=60;MATEID=802159:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_17_29449001_29474001_4C;SPAN=184311;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:7:11:6.8:20,0,6.8:6:4:-20.32:20.32\n17\t33736830\t802912:2\tG\t[1:88507126[G\t49\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=802912:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:88507126(-)-17:33736830(-)__17_33736501_33761501D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:17:12:4.5:49.5,4.5,0:0:17:-49.51:49.51\n17\t33737644\t802914:2\tC\tC]1:88507142]\t52\tPASS\tEVDNC=ASSMB;INSERTION=G;MAPQ=60;MATEID=802914:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_17_33736501_33761501_18C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:18:10:4.8:52.8,4.8,0:18:0:-52.81:52.81\n17\t34545962\t803094:1\tA\tA[17:34547600[\t46\tPASS\tEVDNC=ASSMB;INSERTION=CTT;MAPQ=60;MATEID=803094:2;MATENM=0;NM=5;NUMPARTS=2;SCTG=c_17_34545001_34570001_0C;SPAN=1638;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:16:7:4.2:46.2,4.2,0:16:0:-46.21:46.21\n17\t34547600\t803094:2\tG\t]17:34545962]G\t46\tPASS\tEVDNC=ASSMB;INSERTION=CTT;MAPQ=60;MATEID=803094:1;MATENM=5;NM=0;NUMPARTS=2;SCTG=c_17_34545001_34570001_0C;SPAN=1638;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:16:7:4.2:46.2,4.2,0:16:0:-46.21:46.21\n17\t34977737\t815353:1\tG\t]17:74777739]G\t40\tPASS\tDISC_MAPQ=255;EVDNC=TSI_L;HOMSEQ=GGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCTGAAGCGGGCAGATCACCTGAGGTCAGGAGTTCAAGACCAGCTTGGCCAACATGGCGAAACCCCGTCTCTACTAACAATATAAAAAAATTATCCAGGCGTGGTGGTGGGCACCTG;INSERTION=C;MAPQ=60;MATEID=815353:2;MATENM=1;NM=0;NUMPARTS=3;REPSEQ=AAA;SCTG=c_17_74774001_74799001_8C;SPAN=39800002;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:20:7.7:40.7,0,7.7:11:12:-41.65:41.65\n17\t36446655\t803455:1\tA\tA[17:36459258[\t33\tPASS\tDISC_MAPQ=32;EVDNC=DSCRD;IMPRECISE;MAPQ=32;MATEID=803455:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=17:36446655(+)-17:36459258(-)__17_36456001_36481001D;SPAN=12603;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:11:5:3:33,3,0:0:11:-33.01:33.01\n17\t36459258\t803455:2\tT\t]17:36446655]T\t33\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=803455:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=17:36446655(+)-17:36459258(-)__17_36456001_36481001D;SPAN=12603;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:11:5:3:33,3,0:0:11:-33.01:33.01\n17\t39616248\t803979:1\tA\t]17:39786889]A\t28\tPASS\tEVDNC=ASSMB;HOMSEQ=AG;MAPQ=60;MATEID=803979:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_17_39763501_39788501_24C;SPAN=170641;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:18:14.9:28.1,0,14.9:10:0:-28.08:28.08\n17\t39729080\t804185:1\tC\t]17:40691183]C\t42\tPASS\tEVDNC=ASSMB;INSERTION=A;MAPQ=60;MATEID=804185:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_17_40670001_40695001_8C;SPAN=962103;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:14:13:3.9:42.9,3.9,0:14:0:-42.91:42.91\n17\t39786889\t803979:2\tG\tG[17:39616248[\t28\tPASS\tEVDNC=ASSMB;HOMSEQ=AG;MAPQ=60;MATEID=803979:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_17_39763501_39788501_24C;SPAN=170641;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:18:14.9:28.1,0,14.9:10:0:-28.08:28.08\n17\t40691183\t804185:2\tT\tT[17:39729080[\t42\tPASS\tEVDNC=ASSMB;INSERTION=A;MAPQ=60;MATEID=804185:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_17_40670001_40695001_8C;SPAN=962103;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:14:13:3.9:42.9,3.9,0:14:0:-42.91:42.91\n17\t44048921\t805051:2\tG\t[1:188086594[G\t49\tPASS\tDISC_MAPQ=55;EVDNC=ASDIS;INSERTION=AGC;MAPQ=60;MATEID=805051:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_17_44026501_44051501_18C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:17:15:4.5:49.5,4.5,0:13:9:-49.51:49.51\n17\t44198003\t805152:1\tC\t]17:44358211]C\t49\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=CGTGGGG;MAPQ=60;MATEID=805152:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_17_44345001_44370001_15C;SPAN=160208;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:15:17:4.5:49.5,4.5,0:12:5:-48.04:48.04\n17\t44358211\t805152:2\tG\tG[17:44198003[\t49\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=CGTGGGG;MAPQ=60;MATEID=805152:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_17_44345001_44370001_15C;SPAN=160208;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:15:17:4.5:49.5,4.5,0:12:5:-48.04:48.04\n17\t45488644\t934007:1\tT\t]X:68328802]T\t52\tPASS\tDISC_MAPQ=41;EVDNC=DSCRD;IMPRECISE;MAPQ=41;MATEID=934007:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=17:45488644(-)-23:68328802(+)__23_68306001_68331001D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:18:16:4.8:52.8,4.8,0:0:18:-52.81:52.81\n17\t47670040\t805985:1\tA\t]20:53866284]A\t23\tPASS\tEVDNC=ASSMB;HOMSEQ=ACA;MAPQ=60;MATEID=805985:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_17_47652501_47677501_38C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:21:23.9:23.9,0,27.2:9:0:-23.81:23.84\n17\t48538270\t806286:1\tG\t]17:48539858]G\t85\tPASS\tDISC_MAPQ=42;EVDNC=ASDIS;HOMSEQ=GGA;MAPQ=60;MATEID=806286:2;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_17_48534501_48559501_6C;SPAN=1588;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:29:36:3.2:85.7,0,3.2:17:17:-89.88:89.88\n17\t48538441\t806287:1\tG\tG[17:48539859[\t99\tPASS\tEVDNC=ASSMB;HOMSEQ=AAG;MAPQ=60;MATEID=806287:2;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_17_48534501_48559501_8C;SPAN=1418;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:37:37:10.2:112.2,10.2,0:37:0:-112.2:112.2\n17\t48539858\t806286:2\tA\tA[17:48538270[\t85\tPASS\tDISC_MAPQ=55;EVDNC=ASDIS;HOMSEQ=GGA;MAPQ=60;MATEID=806286:1;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_17_48534501_48559501_6C;SPAN=1588;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:29:36:3.2:85.7,0,3.2:17:17:-89.88:89.88\n17\t48539859\t806287:2\tA\t]17:48538441]A\t99\tPASS\tEVDNC=ASSMB;HOMSEQ=AAG;MAPQ=60;MATEID=806287:1;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_17_48534501_48559501_8C;SPAN=1418;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:37:37:10.2:112.2,10.2,0:37:0:-112.2:112.2\n17\t48813086\t887898:1\tA\t[20:59473634[A\t13\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AG;MAPQ=60;MATEID=887898:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_59461501_59486501_31C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:48:13.1:13.1,0,105.5:4:6:-12.92:17.28\n17\t49274477\t806552:1\tA\tA[17:49275757[\t18\tPASS\tDISC_MAPQ=52;EVDNC=DSCRD;IMPRECISE;MAPQ=52;MATEID=806552:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=17:49274477(+)-17:49275757(-)__17_49269501_49294501D;SPAN=1280;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:28:18.5:18.5,0,51.5:0:8:-18.54:19.42\n17\t49275757\t806552:2\tT\t]17:49274477]T\t18\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=806552:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=17:49274477(+)-17:49275757(-)__17_49269501_49294501D;SPAN=1280;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:28:18.5:18.5,0,51.5:0:8:-18.54:19.42\n17\t50673981\t930954:1\tT\tT]X:46827692]\t29\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCT;MAPQ=60;MATEID=930954:2;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_23_46819501_46844501_18C;SPAN=-1;SUBN=1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:10:10:2.7:29.7,2.7,0:3:7:-29.71:29.71\n17\t50783035\t807096:1\tC\t]17:51292796]C\t32\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=C;MAPQ=60;MATEID=807096:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_17_51278501_51303501_12C;SPAN=509761;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:26:32.3:32.3,0,32.3:9:9:-32.3:32.3\n17\t51221496\t807098:1\tC\t]17:51300764]C\t50\tPASS\tEVDNC=ASSMB;HOMSEQ=CAAA;MAPQ=60;MATEID=807098:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_17_51278501_51303501_97C;SPAN=79268;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:17:21:0.8:50.3,0,0.8:17:0:-52.77:52.77\n17\t51292796\t807096:2\tC\tC[17:50783035[\t32\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=C;MAPQ=60;MATEID=807096:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_17_51278501_51303501_12C;SPAN=509761;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:26:32.3:32.3,0,32.3:9:9:-32.3:32.3\n17\t51300764\t807098:2\tA\tA[17:51221496[\t50\tPASS\tEVDNC=ASSMB;HOMSEQ=CAAA;MAPQ=60;MATEID=807098:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_17_51278501_51303501_97C;SPAN=79268;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:17:21:0.8:50.3,0,0.8:17:0:-52.77:52.77\n17\t51419125\t807186:1\tA\t]17:51459549]A\t31\tPASS\tEVDNC=ASSMB;HOMSEQ=AC;MAPQ=60;MATEID=807186:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_17_51450001_51475001_71C;SPAN=40424;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:31:31.1:31.1,0,44.3:12:0:-30.9:31.08\n17\t51459549\t807186:2\tC\tC[17:51419125[\t31\tPASS\tEVDNC=ASSMB;HOMSEQ=AC;MAPQ=60;MATEID=807186:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_17_51450001_51475001_71C;SPAN=40424;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:31:31.1:31.1,0,44.3:12:0:-30.9:31.08\n17\t52598598\t995132:1\tA\t]Un_JTFH01000033v1_decoy:5897]A\t95\tPASS\tEVDNC=ASSMB;HOMSEQ=AGGC;MAPQ=60;MATEID=995132:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_876_1_5898_0C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:32:9:8.7:95.7,8.7,0:32:0:-95.72:95.72\n17\t52598606\t807511:1\tG\tG]X:49142499]\t29\tPASS\tDISC_MAPQ=54;EVDNC=DSCRD;IMPRECISE;MAPQ=54;MATEID=807511:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=17:52598606(+)-23:49142499(+)__17_52577001_52602001D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:25:29.3:29.3,0,32.6:0:11:-29.28:29.3\n17\t53110849\t807783:1\tC\tC[17:53111170[\t18\tPASS\tEVDNC=ASSMB;INSERTION=ATAATTATGAT;MAPQ=60;MATEID=807783:2;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_17_53091501_53116501_23C;SPAN=321;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:40:18.5:18.5,0,81.2:9:0:-18.47:20.76\n17\t53111170\t807783:2\tT\t]17:53110849]T\t18\tPASS\tEVDNC=ASSMB;INSERTION=ATAATTATGAT;MAPQ=60;MATEID=807783:1;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_17_53091501_53116501_23C;SPAN=321;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:40:18.5:18.5,0,81.2:9:0:-18.47:20.76\n17\t53111341\t807773:2\tT\t[16:6222194[T\t55\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=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591001_45C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:74:124:99:209.6,0,100.7:41:53:-211.4:211.4\n17\t62018502\t810629:1\tC\tC[17:62110864[\t99\tPASS\tEVDNC=ASSMB;HOMSEQ=C;MAPQ=60;MATEID=810629:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_17_62107501_62132501_14C;SPAN=92362;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:62:179:99:154.4,0,296.3:62:0:-154.3:156.8\n17\t62110864\t810629:2\tC\t]17:62018502]C\t99\tPASS\tEVDNC=ASSMB;HOMSEQ=C;MAPQ=60;MATEID=810629:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_17_62107501_62132501_14C;SPAN=92362;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:62:179:99:154.4,0,296.3:62:0:-154.3:156.8\n17\t62135637\t811105:1\tG\t[17:62961840[G\t99\tPASS\tDISC_MAPQ=255;EVDNC=ASDIS;HOMSEQ=C;MAPQ=60;MATEID=811105:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_17_62940501_62965501_5C;SPAN=826203;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:104:168:99:296.3,0,124.7:69:73:-299.8:299.8\n17\t62660892\t810968:1\tA\tA]20:61529111]\t60\tPASS\tDISC_MAPQ=57;EVDNC=DSCRD;IMPRECISE;MAPQ=57;MATEID=810968:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=17:62660892(+)-20:61529111(+)__17_62646501_62671501D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:21:32:17.6:60.5,0,17.6:0:21:-61.42:61.42\n17\t62812070\t889980:1\tT\t]20:63870915]T\t12\tPASS\tDISC_MAPQ=255;EVDNC=ASDIS;INSERTION=GTGTG;MAPQ=60;MATEID=889980:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_63847001_63872001_38C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:5:14:12.5:12.5,0,22.4:2:4:-12.57:12.73\n17\t62961840\t811105:2\tC\t[17:62135637[C\t99\tPASS\tDISC_MAPQ=57;EVDNC=ASDIS;HOMSEQ=C;MAPQ=60;MATEID=811105:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_17_62940501_62965501_5C;SPAN=826203;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:104:168:99:296.3,0,124.7:69:73:-299.8:299.8\n17\t62965942\t886924:1\tC\tC[20:57100409[\t99\tPASS\tEVDNC=ASSMB;HOMSEQ=CC;MAPQ=60;MATEID=886924:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_20_57085001_57110001_84C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:48:156:99:114.8,0,276.5:48:0:-114.6:118.4\n17\t63001506\t889876:1\tT\t[20:63664882[T\t99\tPASS\tDISC_MAPQ=255;EVDNC=ASDIS;HOMSEQ=GA;MAPQ=60;MATEID=889876:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_63651001_63676001_8C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:52:64:5.3:153.8,0,5.3:36:18:-161.6:161.6\n17\t63002553\t882810:1\tA\tA[20:47156833[\t99\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=882810:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_47138001_47163001_67C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:71:137:99:196.1,0,146.6:71:0:-196.2:196.2\n17\t63093446\t811194:1\tG\tG]17:63101678]\t50\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=811194:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=17:63093446(+)-17:63101678(+)__17_63087501_63112501D;SPAN=8232;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:22:80:50.3:50.3,0,149.3:0:22:-50.14:52.96\n17\t63101678\t811194:2\tA\tA]17:63093446]\t50\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=811194:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=17:63093446(+)-17:63101678(+)__17_63087501_63112501D;SPAN=8232;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:22:80:50.3:50.3,0,149.3:0:22:-50.14:52.96\n17\t63842219\t811520:1\tC\t]17:63878730]C\t36\tPASS\tDISC_MAPQ=51;EVDNC=ASDIS;HOMSEQ=CTG;MAPQ=60;MATEID=811520:2;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_17_63871501_63896501_153C;SPAN=36511;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:35:36.5:36.5,0,49.7:11:12:-36.38:36.52\n17\t63863783\t811504:1\tG\tG[17:63887370[\t15\tPASS\tDISC_MAPQ=53;EVDNC=DSCRD;IMPRECISE;MAPQ=53;MATEID=811504:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=17:63863783(+)-17:63887370(-)__17_63847001_63872001D;SPAN=23587;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:38:15.8:15.8,0,78.5:0:8:-15.73:18.19\n17\t63878730\t811520:2\tG\tG[17:63842219[\t36\tPASS\tDISC_MAPQ=32;EVDNC=ASDIS;HOMSEQ=CTG;MAPQ=27;MATEID=811520:1;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_17_63871501_63896501_153C;SPAN=36511;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:35:36.5:36.5,0,49.7:11:12:-36.38:36.52\n17\t63887370\t811504:2\tC\t]17:63863783]C\t15\tPASS\tDISC_MAPQ=52;EVDNC=DSCRD;IMPRECISE;MAPQ=52;MATEID=811504:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=17:63863783(+)-17:63887370(-)__17_63847001_63872001D;SPAN=23587;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:38:15.8:15.8,0,78.5:0:8:-15.73:18.19\n17\t64135849\t811613:1\tC\tC[17:64136778[\t95\tPASS\tDISC_MAPQ=58;EVDNC=ASDIS;HOMSEQ=GAGGTCAGGAGTTCGAGACCAGCCTGGCCAACATGGTGAAACCC;MAPQ=60;MATEID=811613:2;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_17_64116501_64141501_14C;SPAN=929;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:32:16:8.7:95.7,8.7,0:15:21:-95.72:95.72\n17\t64136778\t811613:2\tG\t]17:64135849]G\t95\tPASS\tDISC_MAPQ=59;EVDNC=ASDIS;HOMSEQ=GAGGTCAGGAGTTCGAGACCAGCCTGGCCAACATGGTGAAACCC;MAPQ=60;MATEID=811613:1;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_17_64116501_64141501_14C;SPAN=929;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:32:16:8.7:95.7,8.7,0:15:21:-95.72:95.72\n17\t64310797\t811695:1\tG\t]20:54940897]G\t99\tPASS\tDISC_MAPQ=255;EVDNC=TSI_G;INSERTION=CAACAAATGTTTATTGAGTTTATACTATAAACCTTCTCCTCTTTCCTTTGCTGACTCTCTGCCTGGAACT;MAPQ=60;MATEID=811695:2;MATENM=0;NM=0;NUMPARTS=3;SCTG=c_17_64288001_64313001_4C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:118:103:33:363,33,0:118:0:-363.1:363.1\n17\t65276006\t811993:1\tT\tT[17:65276255[\t66\tPASS\tDISC_MAPQ=59;EVDNC=ASDIS;HOMSEQ=GCCTCGGCCTCCCAAAGTGCTGGGATTACCGGCATGAGCCACCGCACCCGGCCTATAGCAGCATTATTCTT;MAPQ=60;MATEID=811993:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_17_65268001_65293001_24C;SPAN=249;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:22:16:6:66,6,0:12:13:-66.02:66.02\n17\t65276255\t811993:2\tG\t]17:65276006]G\t66\tPASS\tDISC_MAPQ=58;EVDNC=ASDIS;HOMSEQ=GCCTCGGCCTCCCAAAGTGCTGGGATTACCGGCATGAGCCACCGCACCCGGCCTATAGCAGCATTATTCTT;MAPQ=60;MATEID=811993:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_17_65268001_65293001_24C;SPAN=249;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:22:16:6:66,6,0:12:13:-66.02:66.02\n17\t65499944\t812061:1\tG\t]17:65500418]G\t35\tPASS\tDISC_MAPQ=48;EVDNC=DSCRD;IMPRECISE;MAPQ=48;MATEID=812061:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=17:65499944(-)-17:65500418(+)__17_65488501_65513501D;SPAN=474;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:16:62:35.6:35.6,0,118.1:0:16:-35.39:38\n17\t65500418\t812061:2\tA\tA[17:65499944[\t35\tPASS\tDISC_MAPQ=26;EVDNC=DSCRD;IMPRECISE;MAPQ=26;MATEID=812061:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=17:65499944(-)-17:65500418(+)__17_65488501_65513501D;SPAN=474;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:16:62:35.6:35.6,0,118.1:0:16:-35.39:38\n17\t66203075\t812369:1\tA\t]17:66215365]A\t19\tPASS\tDISC_MAPQ=52;EVDNC=ASDIS;HOMSEQ=A;MAPQ=60;MATEID=812369:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_17_66199001_66224001_105C;SPAN=12290;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:48:19.7:19.7,0,98.9:8:7:-19.52:22.68\n17\t66215365\t812369:2\tA\tA[17:66203075[\t19\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=A;MAPQ=60;MATEID=812369:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_17_66199001_66224001_105C;SPAN=12290;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:48:19.7:19.7,0,98.9:8:7:-19.52:22.68\n17\t66268939\t812410:1\tG\tG[17:66269997[\t99\tPASS\tEVDNC=ASSMB;HOMSEQ=AAAAAATGTTTTAAG;MAPQ=60;MATEID=812410:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_17_66248001_66273001_0C;SPAN=1058;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:32:36:6.6:102.3,6.6,0:32:0:-102.8:102.8\n17\t66269997\t812410:2\tA\t]17:66268939]A\t99\tPASS\tEVDNC=ASSMB;HOMSEQ=AAAAAATGTTTTAAG;MAPQ=60;MATEID=812410:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_17_66248001_66273001_0C;SPAN=1058;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:32:36:6.6:102.3,6.6,0:32:0:-102.8:102.8\n17\t66641155\t812584:2\tT\t]6:13191316]T\t40\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=812584:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:13191316(+)-17:66641155(-)__17_66640001_66665001D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:15:34:40.1:40.1,0,43.4:0:15:-39.96:39.98\n17\t68005944\t813236:2\tG\tG[16:24412394[\t49\tPASS\tDISC_MAPQ=56;EVDNC=DSCRD;IMPRECISE;MAPQ=56;MATEID=813236:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=16:24412394(-)-17:68005944(+)__17_67987501_68012501D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:17:17:4.5:49.5,4.5,0:0:17:-49.51:49.51\n17\t69091525\t813744:1\tT\tT[17:69091822[\t99\tPASS\tEVDNC=ASSMB;HOMSEQ=CCAAATAGACTTCTT;MAPQ=60;MATEID=813744:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_17_69090001_69115001_19C;SPAN=297;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:38:43:5.4:118.8,5.4,0:38:0:-121.8:121.8\n17\t69091822\t813744:2\tC\t]17:69091525]C\t99\tPASS\tEVDNC=ASSMB;HOMSEQ=CCAAATAGACTTCTT;MAPQ=60;MATEID=813744:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_17_69090001_69115001_19C;SPAN=297;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:38:43:5.4:118.8,5.4,0:38:0:-121.8:121.8\n17\t69309485\t887352:1\tA\t]20:58273305]A\t15\tPASS\tEVDNC=ASSMB;INSERTION=TA;MAPQ=60;MATEID=887352:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_58261001_58286001_61C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:50:15.8:15.8,0,108.2:9:0:-15.65:19.78\n17\t69341591\t813847:1\tC\tC]17:75821480]\t62\tPASS\tDISC_MAPQ=51;EVDNC=DSCRD;IMPRECISE;MAPQ=51;MATEID=813847:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=17:69341591(+)-17:75821480(+)__17_69335001_69360001D;SPAN=6479889;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:21:16:5.7:62.7,5.7,0:0:21:-62.72:62.72\n17\t72085980\t814650:1\tG\t]17:72298446]G\t75\tPASS\tDISC_MAPQ=56;EVDNC=ASDIS;HOMSEQ=GTG;MAPQ=41;MATEID=814650:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_17_72275001_72300001_17C;SPAN=212466;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:25:25:6.9:75.9,6.9,0:9:24:-75.92:75.92\n17\t72298446\t814650:2\tG\tG[17:72085980[\t75\tPASS\tDISC_MAPQ=58;EVDNC=ASDIS;HOMSEQ=GTG;MAPQ=60;MATEID=814650:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_17_72275001_72300001_17C;SPAN=212466;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:25:25:6.9:75.9,6.9,0:9:24:-75.92:75.92\n17\t72685322\t814760:1\tT\t]17:72685450]T\t82\tPASS\tEVDNC=ASSMB;HOMSEQ=TT;MAPQ=60;MATEID=814760:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_17_72667001_72692001_1C;SPAN=128;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:29:49:39.2:82.1,0,39.2:29:0:-82.67:82.67\n17\t72685450\t814760:2\tT\tT[17:72685322[\t82\tPASS\tEVDNC=ASSMB;HOMSEQ=TT;MAPQ=60;MATEID=814760:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_17_72667001_72692001_1C;SPAN=128;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:29:49:39.2:82.1,0,39.2:29:0:-82.67:82.67\n17\t72701864\t814770:1\tG\t]17:72702013]G\t43\tPASS\tEVDNC=ASSMB;HOMSEQ=GCTGAGGTGG;MAPQ=60;MATEID=814770:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_17_72691501_72716501_15C;SPAN=149;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:16:35:43.1:43.1,0,43.1:16:0:-42.98:42.98\n17\t72702013\t814770:2\tG\tG[17:72701864[\t43\tPASS\tEVDNC=ASSMB;HOMSEQ=GCTGAGGTGG;MAPQ=60;MATEID=814770:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_17_72691501_72716501_15C;SPAN=149;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:16:35:43.1:43.1,0,43.1:16:0:-42.98:42.98\n17\t72819091\t814807:1\tC\tC[17:72825222[\t56\tPASS\tEVDNC=ASSMB;HOMSEQ=TCC;MAPQ=60;MATEID=814807:2;MATENM=4;NM=3;NUMPARTS=2;SCTG=c_17_72814001_72839001_4C;SPAN=6131;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:19:11:5.1:56.1,5.1,0:19:0:-56.11:56.11\n17\t72825222\t814807:2\tT\t]17:72819091]T\t56\tPASS\tEVDNC=ASSMB;HOMSEQ=TCC;MAPQ=60;MATEID=814807:1;MATENM=3;NM=4;NUMPARTS=2;SCTG=c_17_72814001_72839001_4C;SPAN=6131;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:19:11:5.1:56.1,5.1,0:19:0:-56.11:56.11\n17\t72880967\t814830:1\tC\tC[Un_KN707893v1_decoy:1[\t49\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=814830:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_17_72863001_72888001_3C;SPAN=-1;SUBN=1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:15:17:4.5:49.5,4.5,0:15:0:-48.04:48.04\n17\t72880967\t991392:1\tC\tC[Un_KN707893v1_decoy:1[\t52\tPASS\tDISC_MAPQ=255;EVDNC=TSI_L;MAPQ=60;MATEID=991392:2;MATENM=0;NM=0;NUMPARTS=5;REPSEQ=CC;SCTG=c_744_1_8049_5C;SPAN=-1;SUBN=9;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:18:6:4.8:52.8,4.8,0:18:0:-52.81:52.81\n17\t74777739\t815353:2\tG\tG[17:34977737[\t40\tPASS\tDISC_MAPQ=0;EVDNC=TSI_L;HOMSEQ=GGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCTGAAGCGGGCAGATCACCTGAGGTCAGGAGTTCAAGACCAGCTTGGCCAACATGGCGAAACCCCGTCTCTACTAACAATATAAAAAAATTATCCAGGCGTGGTGGTGGGCACCTG;INSERTION=C;MAPQ=25;MATEID=815353:1;MATENM=0;NM=1;NUMPARTS=3;REPSEQ=AAA;SCTG=c_17_74774001_74799001_8C;SPAN=39800002;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:20:7.7:40.7,0,7.7:11:12:-41.65:41.65\n17\t75259894\t815709:1\tA\t]17:75528391]A\t26\tPASS\tEVDNC=ASSMB;HOMSEQ=A;MAPQ=60;MATEID=815709:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_17_75509001_75534001_14C;SPAN=268497;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:34:26.9:26.9,0,56.6:11:0:-26.75:27.42\n17\t75280201\t885044:1\tT\t]20:52003779]T\t61\tPASS\tEVDNC=ASSMB;INSERTION=G;MAPQ=60;MATEID=885044:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_51989001_52014001_51C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:22:39:35.3:61.7,0,35.3:22:0:-62:62\n17\t75431293\t815914:1\tG\t]17:76013043]G\t38\tPASS\tDISC_MAPQ=255;EVDNC=ASDIS;HOMSEQ=GCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC;MAPQ=60;MATEID=815914:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_17_75999001_76024001_11C;SPAN=581750;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:18:5:38,0,5:12:5:-39.01:39.01\n17\t75514279\t815782:1\tA\t]17:75693640]A\t23\tPASS\tEVDNC=ASSMB;INSERTION=ATTTCCT;MAPQ=60;MATEID=815782:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_17_75680501_75705501_62C;SPAN=179361;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:34:23.6:23.6,0,59.9:10:0:-23.45:24.42\n17\t75528391\t815709:2\tA\tA[17:75259894[\t26\tPASS\tEVDNC=ASSMB;HOMSEQ=A;MAPQ=60;MATEID=815709:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_17_75509001_75534001_14C;SPAN=268497;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:34:26.9:26.9,0,56.6:11:0:-26.75:27.42\n17\t75693640\t815782:2\tC\tC[17:75514279[\t23\tPASS\tEVDNC=ASSMB;INSERTION=ATTTCCT;MAPQ=60;MATEID=815782:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_17_75680501_75705501_62C;SPAN=179361;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:34:23.6:23.6,0,59.9:10:0:-23.45:24.42\n17\t75821480\t813847:2\tC\tC]17:69341591]\t62\tPASS\tDISC_MAPQ=57;EVDNC=DSCRD;IMPRECISE;MAPQ=57;MATEID=813847:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=17:69341591(+)-17:75821480(+)__17_69335001_69360001D;SPAN=6479889;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:21:16:5.7:62.7,5.7,0:0:21:-62.72:62.72\n17\t76013043\t815914:2\tC\tC[17:75431293[\t38\tPASS\tDISC_MAPQ=0;EVDNC=ASDIS;HOMSEQ=GCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC;MAPQ=28;MATEID=815914:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_17_75999001_76024001_11C;SPAN=581750;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:18:5:38,0,5:12:5:-39.01:39.01\n17\t78861205\t816744:1\tC\t]17:78878251]C\t31\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=CCC;MAPQ=60;MATEID=816744:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_17_78841001_78866001_7C;SPAN=17046;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:18:11.6:31.4,0,11.6:3:10:-31.6:31.6\n17\t78878251\t816744:2\tC\tC[17:78861205[\t31\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=CCC;MAPQ=60;MATEID=816744:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_17_78841001_78866001_7C;SPAN=17046;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:18:11.6:31.4,0,11.6:3:10:-31.6:31.6\n17\t79555272\t816912:1\tT\t]17:79555909]T\t50\tPASS\tDISC_MAPQ=24;EVDNC=DSCRD;IMPRECISE;MAPQ=24;MATEID=816912:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=17:79555272(-)-17:79555909(+)__17_79551501_79576501D;SPAN=637;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:18:33:30.5:50.3,0,30.5:0:18:-50.33:50.33\n17\t79555909\t816912:2\tT\tT[17:79555272[\t50\tPASS\tDISC_MAPQ=31;EVDNC=DSCRD;IMPRECISE;MAPQ=31;MATEID=816912:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=17:79555272(-)-17:79555909(+)__17_79551501_79576501D;SPAN=637;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:18:33:30.5:50.3,0,30.5:0:18:-50.33:50.33\n17\t80024303\t817074:1\tC\t]17:80024763]C\t54\tPASS\tDISC_MAPQ=47;EVDNC=DSCRD;IMPRECISE;MAPQ=47;MATEID=817074:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=17:80024303(-)-17:80024763(+)__17_80017001_80042001D;SPAN=460;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:20:40:44.9:54.8,0,44.9:0:20:-54.82:54.82\n17\t80024763\t817074:2\tA\tA[17:80024303[\t54\tPASS\tDISC_MAPQ=44;EVDNC=DSCRD;IMPRECISE;MAPQ=44;MATEID=817074:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=17:80024303(-)-17:80024763(+)__17_80017001_80042001D;SPAN=460;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:20:40:44.9:54.8,0,44.9:0:20:-54.82:54.82\n17\t80488068\t817257:1\tG\tG[17:80489964[\t49\tPASS\tDISC_MAPQ=56;EVDNC=ASDIS;HOMSEQ=GGTGGAGGGGAGGGACGCGGTGGAG;MAPQ=60;MATEID=817257:2;MATENM=0;NM=0;NUMPARTS=3;SCTG=c_17_80482501_80507501_16C;SECONDARY;SPAN=1896;SUBN=2;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:17:4:4.5:49.5,4.5,0:3:14:-49.51:49.51\n17\t80489964\t817257:2\tG\t]17:80488068]G\t49\tPASS\tDISC_MAPQ=59;EVDNC=ASDIS;HOMSEQ=GGTGGAGGGGAGGGACGCGGTGGAG;MAPQ=60;MATEID=817257:1;MATENM=0;NM=0;NUMPARTS=3;SCTG=c_17_80482501_80507501_16C;SECONDARY;SPAN=1896;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:17:4:4.5:49.5,4.5,0:3:14:-49.51:49.51\n17\t80497949\t817261:1\tT\t]17:80498108]T\t21\tPASS\tEVDNC=ASSMB;HOMSEQ=TGTGTGTGTTGTGTGTATATGTGAGTGTG;MAPQ=56;MATEID=817261:2;MATENM=5;NM=1;NUMPARTS=2;SCTG=c_17_80482501_80507501_4C;SPAN=159;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:65:21.5:21.5,0,140.3:12:0:-21.34:26.51\n17\t80498108\t817261:2\tG\tG[17:80497949[\t21\tPASS\tEVDNC=ASSMB;HOMSEQ=TGTGTGTGTTGTGTGTATATGTGAGTGTG;MAPQ=60;MATEID=817261:1;MATENM=1;NM=5;NUMPARTS=2;SCTG=c_17_80482501_80507501_4C;SPAN=159;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:65:21.5:21.5,0,140.3:12:0:-21.34:26.51\n18\t3211874\t819499:1\tA\t]18:3280177]A\t53\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=819499:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_18_3258501_3283501_0C;SPAN=68303;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:18:23:3.5:53,0,3.5:18:0:-55.29:55.29\n18\t3280177\t819499:2\tA\tA[18:3211874[\t53\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=819499:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_18_3258501_3283501_0C;SPAN=68303;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:18:23:3.5:53,0,3.5:18:0:-55.29:55.29\n18\t6317356\t12977:2\tA\tA[1:53952995[\t15\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;MAPQ=60;MATEID=12977:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_53949001_53974001_190C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:52:15.2:15.2,0,114.2:6:3:-15.09:19.61\n18\t6432597\t820234:2\tA\t[14:47694624[A\t46\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=T;MAPQ=60;MATEID=820234:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_18_6419001_6444001_8C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:16:13:4.2:46.2,4.2,0:11:5:-46.21:46.21\n18\t6432646\t820233:2\tT\tT]14:47514459]\t25\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=820233:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=14:47514459(+)-18:6432646(+)__18_6419001_6444001D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:15:12.2:25.4,0,12.2:0:9:-25.74:25.74\n18\t6914999\t820340:1\tA\t]18:6923688]A\t19\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=820340:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=18:6914999(-)-18:6923688(+)__18_6909001_6934001D;SPAN=8689;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:26:19.1:19.1,0,45.5:0:8:-19.1:19.73\n18\t6923688\t820340:2\tT\tT[18:6914999[\t19\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=820340:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=18:6914999(-)-18:6923688(+)__18_6909001_6934001D;SPAN=8689;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:26:19.1:19.1,0,45.5:0:8:-19.1:19.73\n18\t8888408\t820893:1\tT\tT[18:9170010[\t22\tPASS\tDISC_MAPQ=38;EVDNC=DSCRD;IMPRECISE;MAPQ=38;MATEID=820893:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=18:8888408(+)-18:9170010(-)__18_9163001_9188001D;SPAN=281602;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:26:22.4:22.4,0,42.2:0:9:-22.4:22.76\n18\t8888538\t820894:1\tA\t]18:9170224]A\t42\tPASS\tDISC_MAPQ=46;EVDNC=DSCRD;IMPRECISE;MAPQ=46;MATEID=820894:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=18:8888538(-)-18:9170224(+)__18_9163001_9188001D;SPAN=281686;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:14:17:1.2:42.9,1.2,0:0:14:-43.71:43.71\n18\t9170010\t820893:2\tT\t]18:8888408]T\t22\tPASS\tDISC_MAPQ=41;EVDNC=DSCRD;IMPRECISE;MAPQ=41;MATEID=820893:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=18:8888408(+)-18:9170010(-)__18_9163001_9188001D;SPAN=281602;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:26:22.4:22.4,0,42.2:0:9:-22.4:22.76\n18\t9170224\t820894:2\tG\tG[18:8888538[\t42\tPASS\tDISC_MAPQ=33;EVDNC=DSCRD;IMPRECISE;MAPQ=33;MATEID=820894:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=18:8888538(-)-18:9170224(+)__18_9163001_9188001D;SPAN=281686;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:14:17:1.2:42.9,1.2,0:0:14:-43.71:43.71\n18\t12202407\t69895:2\tA\t]2:6658148]A\t28\tPASS\tDISC_MAPQ=13;EVDNC=DSCRD;IMPRECISE;MAPQ=13;MATEID=69895:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=2:6658148(+)-18:12202407(-)__2_6639501_6664501D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:15:8.9:28.7,0,8.9:0:10:-29.37:29.37\n18\t14406760\t822300:2\tG\tG]13:18652931]\t20\tPASS\tDISC_MAPQ=30;EVDNC=DSCRD;IMPRECISE;MAPQ=30;MATEID=822300:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:18652931(+)-18:14406760(+)__18_14406001_14431001D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:21:20.6:20.6,0,30.5:0:8:-20.51:20.65\n18\t14641277\t822415:1\tT\t]18:14641411]T\t29\tPASS\tEVDNC=ASSMB;HOMSEQ=TCTCCCGCTTGCCGCCCTCTTTTCCCC;MAPQ=42;MATEID=822415:2;MATENM=5;NM=4;NUMPARTS=2;SCTG=c_18_14626501_14651501_25C;SPAN=134;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:26:29:29,0,35.6:11:0:-29:29.05\n18\t14641411\t822415:2\tC\tC[18:14641277[\t29\tPASS\tEVDNC=ASSMB;HOMSEQ=TCTCCCGCTTGCCGCCCTCTTTTCCCC;MAPQ=60;MATEID=822415:1;MATENM=4;NM=5;NUMPARTS=2;SCTG=c_18_14626501_14651501_25C;SPAN=134;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:26:29:29,0,35.6:11:0:-29:29.05\n18\t15388488\t822796:1\tG\tG[18:15389964[\t89\tPASS\tDISC_MAPQ=10;EVDNC=ASDIS;HOMSEQ=GAGCAGCTTTGAAACACTTTTTTTGTAGAATCTGCAAGTGGACATTTGGAGCACTTTGAG;MAPQ=60;MATEID=822796:2;MATENM=1;NM=9;NUMPARTS=2;SCTG=c_18_15386001_15411001_113C;SPAN=1476;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:31:48:29.6:89,0,29.6:17:19:-90.3:90.3\n18\t15389964\t822796:2\tG\t]18:15388488]G\t89\tPASS\tDISC_MAPQ=31;EVDNC=ASDIS;HOMSEQ=GAGCAGCTTTGAAACACTTTTTTTGTAGAATCTGCAAGTGGACATTTGGAGCACTTTGAG;MAPQ=60;MATEID=822796:1;MATENM=9;NM=1;NUMPARTS=2;SCTG=c_18_15386001_15411001_113C;SPAN=1476;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:31:48:29.6:89,0,29.6:17:19:-90.3:90.3\n18\t15472242\t822965:1\tG\t]18:15610395]G\t39\tPASS\tDISC_MAPQ=13;EVDNC=DSCRD;IMPRECISE;MAPQ=13;MATEID=822965:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=18:15472242(-)-18:15610395(+)__18_15606501_15631501D;SPAN=138153;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:13:6:3.6:39.6,3.6,0:0:13:-39.61:39.61\n18\t15473014\t823058:1\tC\tC[18:15699547[\t26\tPASS\tDISC_MAPQ=21;EVDNC=DSCRD;IMPRECISE;MAPQ=21;MATEID=823058:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=18:15473014(+)-18:15699547(-)__18_15680001_15705001D;SPAN=226533;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:25:26:26,0,35.9:0:10:-25.98:26.09\n18\t15484866\t823029:1\tC\tC[18:15670595[\t38\tPASS\tDISC_MAPQ=21;EVDNC=DSCRD;IMPRECISE;MAPQ=21;MATEID=823029:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=18:15484866(+)-18:15670595(-)__18_15655501_15680501D;SPAN=185729;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:17:2:38.3,0,2:0:13:-39.65:39.65\n18\t15512491\t822922:1\tA\tA[18:15572260[\t26\tPASS\tDISC_MAPQ=34;EVDNC=DSCRD;IMPRECISE;MAPQ=34;MATEID=822922:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=18:15512491(+)-18:15572260(-)__18_15557501_15582501D;SPAN=59769;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:11:0.2:26.6,0,0.2:0:9:-28.04:28.04\n18\t15572260\t822922:2\tT\t]18:15512491]T\t26\tPASS\tDISC_MAPQ=30;EVDNC=DSCRD;IMPRECISE;MAPQ=30;MATEID=822922:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=18:15512491(+)-18:15572260(-)__18_15557501_15582501D;SPAN=59769;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:11:0.2:26.6,0,0.2:0:9:-28.04:28.04\n18\t15573653\t823140:1\tT\tT[18:15770472[\t99\tPASS\tDISC_MAPQ=30;EVDNC=DSCRD;IMPRECISE;MAPQ=30;MATEID=823140:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=18:15573653(+)-18:15770472(-)__18_15753501_15778501D;SPAN=196819;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:39:6:10.8:118.8,10.8,0:0:39:-118.8:118.8\n18\t15573782\t823142:1\tC\t]18:15772299]C\t26\tPASS\tDISC_MAPQ=16;EVDNC=DSCRD;IMPRECISE;MAPQ=16;MATEID=823142:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=18:15573782(-)-18:15772299(+)__18_15753501_15778501D;SPAN=198517;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:9:9:2.4:26.4,2.4,0:0:9:-26.41:26.41\n18\t15577908\t822942:1\tG\tG[18:15776457[\t64\tPASS\tDISC_MAPQ=22;EVDNC=DSCRD;IMPRECISE;MAPQ=22;MATEID=822942:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=18:15577908(+)-18:15776457(-)__18_15557501_15582501D;SPAN=198549;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:22:28:5.3:64.7,0,5.3:0:22:-67.65:67.65\n18\t15582223\t822954:1\tT\t]18:15743887]T\t39\tPASS\tDISC_MAPQ=31;EVDNC=DSCRD;IMPRECISE;MAPQ=31;MATEID=822954:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=18:15582223(-)-18:15743887(+)__18_15582001_15607001D;SPAN=161664;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:13:16:0.9:39.6,0.9,0:0:13:-40.41:40.41\n18\t15593264\t823146:1\tG\tG[18:15757733[\t25\tPASS\tDISC_MAPQ=23;EVDNC=DSCRD;IMPRECISE;MAPQ=23;MATEID=823146:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=18:15593264(+)-18:15757733(-)__18_15753501_15778501D;SPAN=164469;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:17:15.2:25.1,0,15.2:0:9:-24.99:24.99\n18\t15598663\t822950:2\tG\t]9:65079191]G\t23\tPASS\tDISC_MAPQ=26;EVDNC=DSCRD;IMPRECISE;MAPQ=26;MATEID=822950:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=9:65079191(+)-18:15598663(-)__18_15582001_15607001D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:12:6.5:23,0,6.5:0:8:-23.49:23.49\n18\t15610395\t822965:2\tT\tT[18:15472242[\t39\tPASS\tDISC_MAPQ=25;EVDNC=DSCRD;IMPRECISE;MAPQ=25;MATEID=822965:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=18:15472242(-)-18:15610395(+)__18_15606501_15631501D;SPAN=138153;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:13:6:3.6:39.6,3.6,0:0:13:-39.61:39.61\n18\t15670595\t823029:2\tC\t]18:15484866]C\t38\tPASS\tDISC_MAPQ=34;EVDNC=DSCRD;IMPRECISE;MAPQ=34;MATEID=823029:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=18:15484866(+)-18:15670595(-)__18_15655501_15680501D;SPAN=185729;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:17:2:38.3,0,2:0:13:-39.65:39.65\n18\t15691965\t823077:1\tA\tA[18:20640424[\t99\tPASS\tDISC_MAPQ=36;EVDNC=ASDIS;INSERTION=TCCCTCTTTTTATAGAATTTAAAACTGGATATATGGATAGCTCTAACTATTTCTTTATAAACGTT;MAPQ=60;MATEID=823077:2;MATENM=6;NM=5;NUMPARTS=2;SCTG=c_18_15680001_15705001_713C;SPAN=4948459;SUBN=1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:33:8:9:99,9,0:30:5:-99.02:99.02\n18\t15699547\t823058:2\tT\t]18:15473014]T\t26\tPASS\tDISC_MAPQ=25;EVDNC=DSCRD;IMPRECISE;MAPQ=25;MATEID=823058:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=18:15473014(+)-18:15699547(-)__18_15680001_15705001D;SPAN=226533;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:25:26:26,0,35.9:0:10:-25.98:26.09\n18\t15730131\t823155:1\tA\t]18:15755215]A\t69\tPASS\tDISC_MAPQ=36;EVDNC=DSCRD;IMPRECISE;MAPQ=36;MATEID=823155:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=18:15730131(-)-18:15755215(+)__18_15753501_15778501D;SPAN=25084;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:23:10:6.3:69.3,6.3,0:0:23:-69.32:69.32\n18\t15743887\t822954:2\tA\tA[18:15582223[\t39\tPASS\tDISC_MAPQ=36;EVDNC=DSCRD;IMPRECISE;MAPQ=36;MATEID=822954:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=18:15582223(-)-18:15743887(+)__18_15582001_15607001D;SPAN=161664;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:13:16:0.9:39.6,0.9,0:0:13:-40.41:40.41\n18\t15745704\t823815:1\tT\tT[18:20611478[\t36\tPASS\tDISC_MAPQ=30;EVDNC=DSCRD;IMPRECISE;MAPQ=30;MATEID=823815:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=18:15745704(+)-18:20611478(-)__18_20604501_20629501D;SPAN=4865774;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:12:11:3.3:36.3,3.3,0:0:12:-36.31:36.31\n18\t15754745\t823161:1\tT\t]18:20640702]T\t36\tPASS\tDISC_MAPQ=39;EVDNC=DSCRD;IMPRECISE;MAPQ=39;MATEID=823161:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=18:15754745(-)-18:20640702(+)__18_15753501_15778501D;SPAN=4885957;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:12:9:3.3:36.3,3.3,0:0:12:-36.31:36.31\n18\t15755215\t823155:2\tT\tT[18:15730131[\t69\tPASS\tDISC_MAPQ=39;EVDNC=DSCRD;IMPRECISE;MAPQ=39;MATEID=823155:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=18:15730131(-)-18:15755215(+)__18_15753501_15778501D;SPAN=25084;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:23:10:6.3:69.3,6.3,0:0:23:-69.32:69.32\n18\t15757733\t823146:2\tA\t]18:15593264]A\t25\tPASS\tDISC_MAPQ=34;EVDNC=DSCRD;IMPRECISE;MAPQ=34;MATEID=823146:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=18:15593264(+)-18:15757733(-)__18_15753501_15778501D;SPAN=164469;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:17:15.2:25.1,0,15.2:0:9:-24.99:24.99\n18\t15770472\t823140:2\tT\t]18:15573653]T\t99\tPASS\tDISC_MAPQ=25;EVDNC=DSCRD;IMPRECISE;MAPQ=25;MATEID=823140:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=18:15573653(+)-18:15770472(-)__18_15753501_15778501D;SPAN=196819;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:39:6:10.8:118.8,10.8,0:0:39:-118.8:118.8\n18\t15772299\t823142:2\tC\tC[18:15573782[\t26\tPASS\tDISC_MAPQ=27;EVDNC=DSCRD;IMPRECISE;MAPQ=27;MATEID=823142:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=18:15573782(-)-18:15772299(+)__18_15753501_15778501D;SPAN=198517;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:9:9:2.4:26.4,2.4,0:0:9:-26.41:26.41\n18\t15776457\t822942:2\tC\t]18:15577908]C\t64\tPASS\tDISC_MAPQ=18;EVDNC=DSCRD;IMPRECISE;MAPQ=18;MATEID=822942:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=18:15577908(+)-18:15776457(-)__18_15557501_15582501D;SPAN=198549;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:22:28:5.3:64.7,0,5.3:0:22:-67.65:67.65\n18\t15837315\t823280:1\tT\t]18:16263138]T\t28\tPASS\tDISC_MAPQ=18;EVDNC=DSCRD;IMPRECISE;MAPQ=18;MATEID=823280:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=18:15837315(-)-18:16263138(+)__18_16243501_16268501D;SPAN=425823;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:15:8.9:28.7,0,8.9:0:10:-29.37:29.37\n18\t16263138\t823280:2\tA\tA[18:15837315[\t28\tPASS\tDISC_MAPQ=22;EVDNC=DSCRD;IMPRECISE;MAPQ=22;MATEID=823280:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=18:15837315(-)-18:16263138(+)__18_16243501_16268501D;SPAN=425823;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:15:8.9:28.7,0,8.9:0:10:-29.37:29.37\n18\t17538975\t823381:1\tT\t]18:18038741]T\t59\tPASS\tDISC_MAPQ=39;EVDNC=ASDIS;HOMSEQ=TGAAAAAGGAAATATCTTCCCATAAAAACTAGACAGAAGCATTCTCAGAAACTTA;MAPQ=54;MATEID=823381:2;MATENM=1;NM=0;NUMPARTS=2;REPSEQ=TGTG;SCTG=c_18_17517501_17542501_323C;SECONDARY;SPAN=499766;SUBN=2;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:20:14:5.4:59.4,5.4,0:6:14:-59.41:59.41\n18\t17816419\t823778:1\tG\t[18:20561646[G\t33\tPASS\tDISC_MAPQ=33;EVDNC=DSCRD;IMPRECISE;MAPQ=33;MATEID=823778:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=18:17816419(-)-18:20561646(-)__18_20555501_20580501D;SPAN=2745227;SVTYPE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752001D;SPAN=23750;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:22:15:6:66,6,0:0:22:-66.02:66.02\n18\t20737933\t824051:1\tT\tT[18:20802928[\t31\tPASS\tDISC_MAPQ=21;EVDNC=DSCRD;IMPRECISE;MAPQ=21;MATEID=824051:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=18:20737933(+)-18:20802928(-)__18_20800501_20825501D;SPAN=64995;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:30:31.1:31.1,0,44.3:0:12:-31.18:31.31\n18\t20802928\t824051:2\tA\t]18:20737933]A\t31\tPASS\tDISC_MAPQ=20;EVDNC=DSCRD;IMPRECISE;MAPQ=20;MATEID=824051:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=18:20737933(+)-18:20802928(-)__18_20800501_20825501D;SPAN=64995;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:30:31.1:31.1,0,44.3:0:12:-31.18:31.31\n18\t22231992\t824369:1\tA\t]18:22232842]A\t19\tPASS\tDISC_MAPQ=19;EVDNC=DSCRD;IMPRECISE;MAPQ=19;MATEID=824369:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=18:22231992(-)-18:22232842(+)__18_22221501_22246501D;SPAN=850;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:36:19.7:19.7,0,69.2:0:9:-19.59:21.23\n18\t22232842\t824369:2\tA\tA[18:22231992[\t19\tPASS\tDISC_MAPQ=18;EVDNC=DSCRD;IMPRECISE;MAPQ=18;MATEID=824369:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=18:22231992(-)-18:22232842(+)__18_22221501_22246501D;SPAN=850;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:36:19.7:19.7,0,69.2:0:9:-19.59:21.23\n18\t22550726\t988807:1\tT\t[Un_KN707780v1_decoy:1[T\t42\tPASS\tDISC_MAPQ=255;EVDNC=TSI_L;MAPQ=60;MATEID=988807:2;MATENM=0;NM=0;NUMPARTS=4;SCTG=c_631_1_5691_3C;SPAN=-1;SUBN=3;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:14:4:3.9:42.9,3.9,0:14:0:-42.91:42.91\n18\t22550726\t824462:1\tT\t[Un_KN707780v1_decoy:1[T\t75\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=824462:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_18_22540001_22565001_3C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:25:15:6.9:75.9,6.9,0:25:0:-75.92:75.92\n18\t24323408\t824912:1\tC\tC[18:24324630[\t65\tPASS\tEVDNC=ASSMB;HOMSEQ=AAAAATTAGC;MAPQ=60;MATEID=824912:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_18_24304001_24329001_24C;SPAN=1222;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:25:60:65.6:65.6,0,85.4:25:0:-65.66:65.8\n18\t24324630\t824912:2\tA\t]18:24323408]A\t65\tPASS\tEVDNC=ASSMB;HOMSEQ=AAAAATTAGC;MAPQ=60;MATEID=824912:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_18_24304001_24329001_24C;SPAN=1222;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:25:60:65.6:65.6,0,85.4:25:0:-65.66:65.8\n18\t27149217\t825552:1\tC\t]18:27159058]C\t30\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=825552:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=18:27149217(-)-18:27159058(+)__18_27146001_27171001D;SPAN=9841;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:21:20.6:30.5,0,20.6:0:11:-30.47:30.47\n18\t27159058\t825552:2\tT\tT[18:27149217[\t30\tPASS\tDISC_MAPQ=47;EVDNC=DSCRD;IMPRECISE;MAPQ=47;MATEID=825552:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=18:27149217(-)-18:27159058(+)__18_27146001_27171001D;SPAN=9841;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:21:20.6:30.5,0,20.6:0:11:-30.47:30.47\n18\t28693120\t825853:1\tA\tA[18:28698448[\t42\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=825853:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=18:28693120(+)-18:28698448(-)__18_28689501_28714501D;SPAN=5328;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:14:5:3.9:42.9,3.9,0:0:14:-42.91:42.91\n18\t28698448\t825853:2\tA\t]18:28693120]A\t42\tPASS\tDISC_MAPQ=36;EVDNC=DSCRD;IMPRECISE;MAPQ=36;MATEID=825853:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=18:28693120(+)-18:28698448(-)__18_28689501_28714501D;SPAN=5328;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:14:5:3.9:42.9,3.9,0:0:14:-42.91:42.91\n18\t35943975\t827512:1\tA\t]18:36231155]A\t35\tPASS\tEVDNC=ASSMB;HOMSEQ=A;MAPQ=60;MATEID=827512:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_18_36211001_36236001_21C;SPAN=287180;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:15:2.3:35.3,0,2.3:12:0:-37.11:37.11\n18\t36114704\t827477:1\tC\t]18:36135496]C\t64\tPASS\tEVDNC=ASSMB;INSERTION=TTCCATTTCTGGAATTCATAA;MAPQ=60;MATEID=827477:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_18_36113001_36138001_4C;SPAN=20792;SUBN=2;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:26:76:64.7:64.7,0,124.1:26:0:-64.46:65.58\n18\t36135496\t827477:2\tA\tA[18:36114704[\t64\tPASS\tEVDNC=ASSMB;INSERTION=TTCCATTTCTGGAATTCATAA;MAPQ=60;MATEID=827477:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_18_36113001_36138001_4C;SPAN=20792;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:26:76:64.7:64.7,0,124.1:26:0:-64.46:65.58\n18\t36231155\t827512:2\tA\tA[18:35943975[\t35\tPASS\tEVDNC=ASSMB;HOMSEQ=A;MAPQ=60;MATEID=827512:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_18_36211001_36236001_21C;SPAN=287180;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:15:2.3:35.3,0,2.3:12:0:-37.11:37.11\n18\t39481682\t828095:1\tC\tC[18:39481999[\t46\tPASS\tEVDNC=ASSMB;HOMSEQ=AAAGAATCAGATTC;MAPQ=60;MATEID=828095:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_18_39469501_39494501_6C;SPAN=317;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:15:9:4.2:46.2,4.2,0:15:0:-46.21:46.21\n18\t39481999\t828095:2\tA\t]18:39481682]A\t46\tPASS\tEVDNC=ASSMB;HOMSEQ=AAAGAATCAGATTC;MAPQ=60;MATEID=828095:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_18_39469501_39494501_6C;SPAN=317;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:15:9:4.2:46.2,4.2,0:15:0:-46.21:46.21\n18\t41284924\t828480:1\tA\tA[18:41288379[\t99\tPASS\tDISC_MAPQ=59;EVDNC=DSCRD;IMPRECISE;MAPQ=59;MATEID=828480:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=18:41284924(+)-18:41288379(-)__18_41282501_41307501D;SPAN=3455;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:33:5:9:99,9,0:0:33:-99.02:99.02\n18\t41288379\t828480:2\tA\t]18:41284924]A\t99\tPASS\tDISC_MAPQ=59;EVDNC=DSCRD;IMPRECISE;MAPQ=59;MATEID=828480:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=18:41284924(+)-18:41288379(-)__18_41282501_41307501D;SPAN=3455;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:33:5:9:99,9,0:0:33:-99.02:99.02\n18\t45729261\t829333:1\tC\t]18:45825466]C\t23\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=CTGTT;MAPQ=60;MATEID=829333:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_18_45815001_45840001_9C;SPAN=96205;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:8:6:2.1:23.1,2.1,0:6:5:-23.11:23.11\n18\t45825466\t829333:2\tT\tT[18:45729261[\t23\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=CTGTT;MAPQ=60;MATEID=829333:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_18_45815001_45840001_9C;SPAN=96205;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:8:6:2.1:23.1,2.1,0:6:5:-23.11:23.11\n18\t46441888\t614599:2\tG\t[12:7677446[G\t33\tPASS\tDISC_MAPQ=0;EVDNC=ASDIS;INSERTION=GGCCC;MAPQ=56;MATEID=614599:1;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_12_7668501_7693501_2C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:11:8:3:33,3,0:9:6:-33.01:33.01\n18\t48671984\t829827:1\tA\tA]Un_KN707797v1_decoy:4209]\t52\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=829827:2;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_18_48657001_48682001_3C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:18:8:4.8:52.8,4.8,0:18:0:-52.81:52.81\n18\t50168722\t830247:1\tA\tA[18:50172016[\t49\tPASS\tDISC_MAPQ=53;EVDNC=DSCRD;IMPRECISE;MAPQ=53;MATEID=830247:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=18:50168722(+)-18:50172016(-)__18_50151501_50176501D;SPAN=3294;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:17:3:4.5:49.5,4.5,0:0:17:-49.51:49.51\n18\t50172016\t830247:2\tA\t]18:50168722]A\t49\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=830247:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=18:50168722(+)-18:50172016(-)__18_50151501_50176501D;SPAN=3294;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:17:3:4.5:49.5,4.5,0:0:17:-49.51:49.51\n18\t53679599\t831138:1\tA\tA[18:53684205[\t72\tPASS\tEVDNC=ASSMB;INSERTION=GAATAGGTGGCTATCTTCTAGGTGGCTAAACACCT;MAPQ=60;MATEID=831138:2;MATENM=6;NM=3;NUMPARTS=2;SCTG=c_18_53655001_53680001_3C;SPAN=4606;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:24:4:6.6:72.6,6.6,0:24:0:-72.62:72.62\n18\t53684205\t831138:2\tA\t]18:53679599]A\t72\tPASS\tEVDNC=ASSMB;INSERTION=GAATAGGTGGCTATCTTCTAGGTGGCTAAACACCT;MAPQ=60;MATEID=831138:1;MATENM=3;NM=6;NUMPARTS=2;SCTG=c_18_53655001_53680001_3C;SPAN=4606;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:24:4:6.6:72.6,6.6,0:24:0:-72.62:72.62\n18\t54415776\t831595:1\tG\t]18:55012965]G\t46\tPASS\tEVDNC=ASSMB;HOMSEQ=G;MAPQ=60;MATEID=831595:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_18_55002501_55027501_1C;SPAN=597189;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:16:12:4.2:46.2,4.2,0:16:0:-46.21:46.21\n18\t54426714\t831418:1\tG\tG[18:54430589[\t99\tPASS\tDISC_MAPQ=59;EVDNC=DSCRD;IMPRECISE;MAPQ=59;MATEID=831418:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=18:54426714(+)-18:54430589(-)__18_54414501_54439501D;SPAN=3875;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:44:13:12.3:135.3,12.3,0:0:44:-135.3:135.3\n18\t54430589\t831418:2\tG\t]18:54426714]G\t99\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=831418:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=18:54426714(+)-18:54430589(-)__18_54414501_54439501D;SPAN=3875;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:44:13:12.3:135.3,12.3,0:0:44:-135.3:135.3\n18\t54537527\t831451:1\tN\t]18:54538399]N\t95\tPASS\tDISC_MAPQ=35;EVDNC=DSCRD;IMPRECISE;MAPQ=35;MATEID=831451:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=18:54537527(-)-18:54538399(+)__18_54537001_54562001D;SPAN=872;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:32:25:8.7:95.7,8.7,0:0:32:-95.72:95.72\n18\t54538399\t831451:2\tA\tA[18:54537527[\t95\tPASS\tDISC_MAPQ=36;EVDNC=DSCRD;IMPRECISE;MAPQ=36;MATEID=831451:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=18:54537527(-)-18:54538399(+)__18_54537001_54562001D;SPAN=872;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:32:25:8.7:95.7,8.7,0:0:32:-95.72:95.72\n18\t55012965\t831595:2\tG\tG[18:54415776[\t46\tPASS\tEVDNC=ASSMB;HOMSEQ=G;MAPQ=60;MATEID=831595:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_18_55002501_55027501_1C;SPAN=597189;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:16:12:4.2:46.2,4.2,0:16:0:-46.21:46.21\n18\t57714342\t832138:2\tC\t[5:176306407[C\t99\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AG;MAPQ=60;MATEID=832138:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_18_57697501_57722501_6C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:42:15:11.7:128.7,11.7,0:25:23:-128.7:128.7\n18\t57714588\t832137:2\tG\tG]5:176306387]\t82\tPASS\tDISC_MAPQ=51;EVDNC=ASDIS;HOMSEQ=C;MAPQ=60;MATEID=832137:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_18_57697501_57722501_10C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:27:10:7.5:82.5,7.5,0:27:7:-82.52:82.52\n18\t60943836\t832894:1\tT\t]18:61036218]T\t46\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TA;MAPQ=60;MATEID=832894:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_18_61029501_61054501_1C;SPAN=92382;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:15:13:4.2:46.2,4.2,0:11:11:-46.21:46.21\n18\t61036218\t832894:2\tA\tA[18:60943836[\t46\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TA;MAPQ=60;MATEID=832894:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_18_61029501_61054501_1C;SPAN=92382;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:15:13:4.2:46.2,4.2,0:11:11:-46.21:46.21\n18\t66670210\t834219:1\tC\t]18:66682051]C\t23\tPASS\tEVDNC=ASSMB;HOMSEQ=CTT;MAPQ=60;MATEID=834219:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_18_66664501_66689501_5C;SPAN=11841;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:23:23.3:23.3,0,33.2:9:0:-23.24:23.37\n18\t66682051\t834219:2\tT\tT[18:66670210[\t23\tPASS\tEVDNC=ASSMB;HOMSEQ=CTT;MAPQ=60;MATEID=834219:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_18_66664501_66689501_5C;SPAN=11841;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:23:23.3:23.3,0,33.2:9:0:-23.24:23.37\n18\t68905257\t349695:2\tG\t[6:75321511[G\t49\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TC;MAPQ=60;MATEID=349695:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_6_75313001_75338001_23C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:16:17:4.5:49.5,4.5,0:14:3:-49.51:49.51\n18\t71950157\t835731:2\tT\tT]2:143253785]\t36\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=835731:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=2:143253785(+)-18:71950157(+)__18_71932001_71957001D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:12:6:3.3:36.3,3.3,0:0:12:-36.31:36.31\n18\t74044264\t836323:2\tA\t[9:125123053[A\t46\tPASS\tDISC_MAPQ=7;EVDNC=ASDIS;INSERTION=AGATA;MAPQ=60;MATEID=836323:1;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_18_74039001_74064001_4C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:15:7:4.2:46.2,4.2,0:12:4:-46.21:46.21\n18\t74044279\t836324:2\tC\tC]9:125123230]\t56\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;MAPQ=60;MATEID=836324:1;MATENM=0;NM=9;NUMPARTS=2;SCTG=c_18_74039001_74064001_2C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:19:7:5.1:56.1,5.1,0:15:6:-56.11:56.11\n19\t559970\t838208:1\tC\tC[19:560561[\t12\tPASS\tEVDNC=ASSMB;HOMSEQ=GAGTCTCGCTCTGTCGCCCAGGCTGGAGTGC;MAPQ=60;MATEID=838208:2;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_19_539001_564001_104C;SPAN=591;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:5:16:12.2:12.2,0,25.4:5:0:-12.01:12.37\n19\t560561\t838208:2\tG\t]19:559970]G\t12\tPASS\tEVDNC=ASSMB;HOMSEQ=GAGTCTCGCTCTGTCGCCCAGGCTGGAGTGC;MAPQ=41;MATEID=838208:1;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_19_539001_564001_104C;SPAN=591;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:5:16:12.2:12.2,0,25.4:5:0:-12.01:12.37\n19\t1181750\t838461:1\tA\t]19:1259508]A\t23\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=838461:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=19:1181750(-)-19:1259508(+)__19_1249501_1274501D;SPAN=77758;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:8:8:2.1:23.1,2.1,0:0:8:-23.11:23.11\n19\t1182662\t838437:1\tA\tA[19:1183136[\t34\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=GGAGGCGGAGGTTGCAGTGAGCCGAGATCGCACCACTGCACTCCA;MAPQ=60;MATEID=838437:2;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_19_1176001_1201001_58C;SPAN=474;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:19:11.3:34.4,0,11.3:9:4:-34.76:34.76\n19\t1183136\t838437:2\tG\t]19:1182662]G\t34\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=GGAGGCGGAGGTTGCAGTGAGCCGAGATCGCACCACTGCACTCCA;MAPQ=60;MATEID=838437:1;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_19_1176001_1201001_58C;SPAN=474;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:19:11.3:34.4,0,11.3:9:4:-34.76:34.76\n19\t1259508\t838461:2\tT\tT[19:1181750[\t23\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=838461:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=19:1181750(-)-19:1259508(+)__19_1249501_1274501D;SPAN=77758;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:8:8:2.1:23.1,2.1,0:0:8:-23.11:23.11\n19\t4511483\t839493:1\tG\t]19:4511907]G\t32\tPASS\tDISC_MAPQ=45;EVDNC=ASDIS;HOMSEQ=GTCAGCACGGTCTTGGCCGTGTCTACACC;MAPQ=60;MATEID=839493:2;MATENM=2;NM=2;NUMPARTS=2;SCTG=c_19_4508001_4533001_31C;SPAN=424;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:24:26.3:32.9,0,26.3:9:3:-32.89:32.89\n19\t4511907\t839493:2\tC\tC[19:4511483[\t32\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=GTCAGCACGGTCTTGGCCGTGTCTACACC;MAPQ=60;MATEID=839493:1;MATENM=2;NM=2;NUMPARTS=2;SCTG=c_19_4508001_4533001_31C;SPAN=424;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:24:26.3:32.9,0,26.3:9:3:-32.89:32.89\n19\t4512616\t839494:1\tT\tT[19:4513083[\t22\tPASS\tEVDNC=ASSMB;HOMSEQ=TGGTGTCCACGCCGGTCTGGATGGTTCCT;MAPQ=60;MATEID=839494:2;MATENM=2;NM=2;NUMPARTS=2;SCTG=c_19_4508001_4533001_61C;SPAN=467;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:14:12.5:22.4,0,12.5:8:0:-22.62:22.62\n19\t4513083\t839494:2\tT\t]19:4512616]T\t22\tPASS\tEVDNC=ASSMB;HOMSEQ=TGGTGTCCACGCCGGTCTGGATGGTTCCT;MAPQ=60;MATEID=839494:1;MATENM=2;NM=2;NUMPARTS=2;SCTG=c_19_4508001_4533001_61C;SPAN=467;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:14:12.5:22.4,0,12.5:8:0:-22.62:22.62\n19\t4618612\t839527:1\tG\tG[19:4619569[\t9\tPASS\tEVDNC=ASSMB;HOMSEQ=CCTCTCCTCTGTCTCTCCCTCTCCTCTG;MAPQ=60;MATEID=839527:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_19_4606001_4631001_42C;SPAN=957;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:4:12:9.8:9.8,0,19.7:4:0:-9.831:10.03\n19\t4619569\t839527:2\tC\t]19:4618612]C\t9\tPASS\tEVDNC=ASSMB;HOMSEQ=CCTCTCCTCTGTCTCTCCCTCTCCTCTG;MAPQ=60;MATEID=839527:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_19_4606001_4631001_42C;SPAN=957;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:4:12:9.8:9.8,0,19.7:4:0:-9.831:10.03\n19\t5396869\t839792:1\tA\t]19:5397846]A\t28\tPASS\tEVDNC=ASSMB;HOMSEQ=A;MAPQ=60;MATEID=839792:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_19_5390001_5415001_78C;SPAN=977;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:29:28.1:28.1,0,44.6:11:0:-28.16:28.37\n19\t5397846\t839792:2\tA\tA[19:5396869[\t28\tPASS\tEVDNC=ASSMB;HOMSEQ=A;MAPQ=60;MATEID=839792:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_19_5390001_5415001_78C;SPAN=977;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:29:28.1:28.1,0,44.6:11:0:-28.16:28.37\n19\t5761464\t839907:1\tG\t]19:5761619]G\t44\tPASS\tEVDNC=ASSMB;HOMSEQ=G;MAPQ=60;MATEID=839907:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_19_5757501_5782501_26C;SPAN=155;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:16:29:28.1:44.6,0,28.1:16:0:-44.86:44.86\n19\t5761619\t839907:2\tG\tG[19:5761464[\t44\tPASS\tEVDNC=ASSMB;HOMSEQ=G;MAPQ=60;MATEID=839907:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_19_5757501_5782501_26C;SPAN=155;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:16:29:28.1:44.6,0,28.1:16:0:-44.86:44.86\n19\t6163211\t840019:1\tA\tA[19:6163480[\t56\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=CCTGTAATCCCAGCACTTTGGGA;MAPQ=60;MATEID=840019:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_19_6149501_6174501_3C;SPAN=269;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:19:5:5.1:56.1,5.1,0:9:13:-56.11:56.11\n19\t6163480\t840019:2\tC\t]19:6163211]C\t56\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=CCTGTAATCCCAGCACTTTGGGA;MAPQ=60;MATEID=840019:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_19_6149501_6174501_3C;SPAN=269;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:19:5:5.1:56.1,5.1,0:9:13:-56.11:56.11\n19\t7153006\t840455:1\tA\t]19:7153587]A\t19\tPASS\tDISC_MAPQ=19;EVDNC=DSCRD;IMPRECISE;MAPQ=19;MATEID=840455:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=19:7153006(-)-19:7153587(+)__19_7129501_7154501D;SPAN=581;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:37:19.4:19.4,0,72.2:0:9:-19.31:21.11\n19\t7153587\t840455:2\tT\tT[19:7153006[\t19\tPASS\tDISC_MAPQ=57;EVDNC=DSCRD;IMPRECISE;MAPQ=57;MATEID=840455:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=19:7153006(-)-19:7153587(+)__19_7129501_7154501D;SPAN=581;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:37:19.4:19.4,0,72.2:0:9:-19.31:21.11\n19\t7322146\t840547:1\tG\t[19:7322460[G\t26\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=840547:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=19:7322146(-)-19:7322460(-)__19_7301001_7326001D;SPAN=314;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:9:4:2.4:26.4,2.4,0:0:9:-26.41:26.41\n19\t7322460\t840547:2\tA\t[19:7322146[A\t26\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=840547:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=19:7322146(-)-19:7322460(-)__19_7301001_7326001D;SPAN=314;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:9:4:2.4:26.4,2.4,0:0:9:-26.41:26.41\n19\t8346856\t841006:1\tG\tG[19:8349598[\t22\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=841006:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_19_8330001_8355001_50C;SPAN=2742;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:14:12.5:22.4,0,12.5:8:0:-22.62:22.62\n19\t8349598\t841006:2\tA\t]19:8346856]A\t22\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=841006:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_19_8330001_8355001_50C;SPAN=2742;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:14:12.5:22.4,0,12.5:8:0:-22.62:22.62\n19\t8473352\t378412:2\tT\t]7:5791828]T\t29\tPASS\tDISC_MAPQ=3;EVDNC=ASDIS;HOMSEQ=TCGGGAGGCTGAGGCAG;MAPQ=41;MATEID=378412:1;MATENM=8;NM=2;NUMPARTS=2;SCTG=c_7_5782001_5807001_18C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:10:7:2.7:29.7,2.7,0:10:5:-29.71:29.71\n19\t8896565\t841246:1\tC\t]Un_JTFH01000107v1_decoy:3383]C\t19\tPASS\tEVDNC=ASSMB;HOMSEQ=CACCACCACCA;MAPQ=60;MATEID=841246:2;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_19_8893501_8918501_84C;SPAN=-1;SUBN=4;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:7:12:9.8:19.7,0,9.8:7:0:-19.89:19.89\n19\t8896582\t994908:1\tT\tT]Un_JTFH01000017v1_decoy:7832]\t33\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=994908:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_860_1_7832_0C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:11:2:3:33,3,0:11:0:-33.01:33.01\n19\t9112286\t841364:1\tC\tC[19:9114446[\t20\tPASS\tEVDNC=ASSMB;HOMSEQ=CATGCCTGTAATCCCAGC;MAPQ=60;MATEID=841364:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_19_9114001_9139001_114C;SPAN=2160;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:7:9:0.8:20.6,0,0.8:7:0:-21.46:21.46\n19\t9114446\t841364:2\tC\t]19:9112286]C\t20\tPASS\tEVDNC=ASSMB;HOMSEQ=CATGCCTGTAATCCCAGC;MAPQ=60;MATEID=841364:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_19_9114001_9139001_114C;SPAN=2160;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:7:9:0.8:20.6,0,0.8:7:0:-21.46:21.46\n19\t9167128\t463125:2\tT\t]8:93654319]T\t62\tPASS\tDISC_MAPQ=45;EVDNC=DSCRD;IMPRECISE;MAPQ=45;MATEID=463125:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=8:93654319(+)-19:9167128(-)__8_93639001_93664001D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:21:10:5.7:62.7,5.7,0:0:21:-62.72:62.72\n19\t10890365\t841999:1\tT\t]19:10986999]T\t32\tPASS\tEVDNC=ASSMB;HOMSEQ=T;MAPQ=60;MATEID=841999:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_19_10976001_11001001_62C;SPAN=96634;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:15:5.6:32,0,5.6:11:0:-33.15:33.15\n19\t10986999\t841999:2\tT\tT[19:10890365[\t32\tPASS\tEVDNC=ASSMB;HOMSEQ=T;MAPQ=60;MATEID=841999:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_19_10976001_11001001_62C;SPAN=96634;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:15:5.6:32,0,5.6:11:0:-33.15:33.15\n19\t12445946\t842403:1\tG\tG[19:12447413[\t36\tPASS\tDISC_MAPQ=49;EVDNC=ASDIS;HOMSEQ=GGCTAATTTTTTGTATTTTTAGTAGAGATGGGGTTTCACCGTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCACCTCGGCCTCCCAAAGTGCTGGGATTACAGG;MAPQ=60;MATEID=842403:2;MATENM=6;NM=3;NUMPARTS=2;SCTG=c_19_12446001_12471001_17C;SPAN=1467;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:12:0:3.3:36.3,3.3,0:0:12:-36.31:36.31\n19\t12447413\t842403:2\tG\t]19:12445946]G\t36\tPASS\tDISC_MAPQ=58;EVDNC=ASDIS;HOMSEQ=GGCTAATTTTTTGTATTTTTAGTAGAGATGGGGTTTCACCGTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCACCTCGGCCTCCCAAAGTGCTGGGATTACAGG;MAPQ=60;MATEID=842403:1;MATENM=3;NM=6;NUMPARTS=2;SCTG=c_19_12446001_12471001_17C;SPAN=1467;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:12:0:3.3:36.3,3.3,0:0:12:-36.31:36.31\n19\t12584070\t842464:1\tA\tA[19:12588117[\t52\tPASS\tEVDNC=ASSMB;HOMSEQ=GCCTCCCA;MAPQ=60;MATEID=842464:2;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_19_12568501_12593501_6C;SPAN=4047;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:18:10:4.8:52.8,4.8,0:18:0:-52.81:52.81\n19\t12588117\t842464:2\tG\t]19:12584070]G\t52\tPASS\tEVDNC=ASSMB;HOMSEQ=GCCTCCCA;MAPQ=60;MATEID=842464:1;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_19_12568501_12593501_6C;SPAN=4047;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:18:10:4.8:52.8,4.8,0:18:0:-52.81:52.81\n19\t12677341\t842528:1\tA\t]19:12816052]A\t39\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=842528:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=19:12677341(-)-19:12816052(+)__19_12813501_12838501D;SPAN=138711;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:13:13:3.6:39.6,3.6,0:0:13:-39.61:39.61\n19\t12816052\t842528:2\tC\tC[19:12677341[\t39\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=842528:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=19:12677341(-)-19:12816052(+)__19_12813501_12838501D;SPAN=138711;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:13:13:3.6:39.6,3.6,0:0:13:-39.61:39.61\n19\t13737615\t842826:2\tT\t[6:147050431[T\t99\tPASS\tDISC_MAPQ=58;EVDNC=ASDIS;HOMSEQ=CCTGGCTAATTTTTGTATTTTTAGTAGAGA;INSERTION=AAGCCACCGTGTCCCGCCAGCATCCACCTGC;MAPQ=60;MATEID=842826:1;MATENM=1;NM=0;NUMPARTS=3;SCTG=c_19_13720001_13745001_137C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:38:14:10.5:115.5,10.5,0:37:7:-115.5:115.5\n19\t14621596\t843081:1\tT\tT[19:14623316[\t15\tPASS\tDISC_MAPQ=53;EVDNC=DSCRD;IMPRECISE;MAPQ=53;MATEID=843081:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=19:14621596(+)-19:14623316(-)__19_14602001_14627001D;SPAN=1720;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:52:15.2:15.2,0,114.2:0:9:-15.09:19.61\n19\t14623316\t843081:2\tA\t]19:14621596]A\t15\tPASS\tDISC_MAPQ=49;EVDNC=DSCRD;IMPRECISE;MAPQ=49;MATEID=843081:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=19:14621596(+)-19:14623316(-)__19_14602001_14627001D;SPAN=1720;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:52:15.2:15.2,0,114.2:0:9:-15.09:19.61\n19\t14935580\t843247:1\tT\tT[19:14938666[\t29\tPASS\tEVDNC=ASSMB;HOMSEQ=T;MAPQ=60;MATEID=843247:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_19_14920501_14945501_102C;SPAN=3086;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:24:29.6:29.6,0,29.6:11:0:-29.57:29.57\n19\t14938666\t843247:2\tT\t]19:14935580]T\t29\tPASS\tEVDNC=ASSMB;HOMSEQ=T;MAPQ=60;MATEID=843247:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_19_14920501_14945501_102C;SPAN=3086;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:24:29.6:29.6,0,29.6:11:0:-29.57:29.57\n19\t15675292\t843627:1\tT\t[19:15777541[T\t85\tPASS\tDISC_MAPQ=58;EVDNC=ASDIS;HOMSEQ=TGTCCACAGGTGCACAGGAGGCACTAGCACAGAACCTGGCATAAG;MAPQ=60;MATEID=843627:2;MATENM=3;NM=14;NUMPARTS=2;SCTG=c_19_15753501_15778501_69C;SPAN=102249;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:28:18:7.8:85.8,7.8,0:14:15:-85.82:85.82\n19\t15777541\t843627:2\tC\t[19:15675292[C\t85\tPASS\tDISC_MAPQ=51;EVDNC=ASDIS;HOMSEQ=TGTCCACAGGTGCACAGGAGGCACTAGCACAGAACCTGGCATAAG;MAPQ=60;MATEID=843627:1;MATENM=14;NM=3;NUMPARTS=2;SCTG=c_19_15753501_15778501_69C;SPAN=102249;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:28:18:7.8:85.8,7.8,0:14:15:-85.82:85.82\n19\t16256431\t843938:1\tC\t]19:16256542]C\t83\tPASS\tEVDNC=ASSMB;INSERTION=CTGATTAGCTGGGATCGCAGGCACATGTG;MAPQ=60;MATEID=843938:2;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_19_16243501_16268501_91C;SPAN=111;SUBN=2;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:29:42:21.2:83.9,0,21.2:29:0:-85.96:85.96\n19\t16256542\t843938:2\tC\tC[19:16256431[\t83\tPASS\tEVDNC=ASSMB;INSERTION=CTGATTAGCTGGGATCGCAGGCACATGTG;MAPQ=60;MATEID=843938:1;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_19_16243501_16268501_91C;SPAN=111;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:29:42:21.2:83.9,0,21.2:29:0:-85.96:85.96\n19\t17722273\t844421:1\tG\t]19:17722440]G\t27\tPASS\tEVDNC=ASSMB;HOMSEQ=GA;MAPQ=60;MATEID=844421:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_19_17713501_17738501_70C;SPAN=167;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:30:27.8:27.8,0,47.6:11:0:-27.88:28.16\n19\t17722440\t844421:2\tA\tA[19:17722273[\t27\tPASS\tEVDNC=ASSMB;HOMSEQ=GA;MAPQ=60;MATEID=844421:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_19_17713501_17738501_70C;SPAN=167;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:30:27.8:27.8,0,47.6:11:0:-27.88:28.16\n19\t17745327\t844424:1\tT\tT[19:17745972[\t42\tPASS\tDISC_MAPQ=57;EVDNC=ASDIS;HOMSEQ=AAAAATTAGCTGGGTGTGGTGGTGGGTGCCTGTAGTCCCAGCTACT;MAPQ=60;MATEID=844424:2;MATENM=2;NM=1;NUMPARTS=2;SCTG=c_19_17738001_17763001_74C;SPAN=645;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:14:11:3.9:42.9,3.9,0:7:8:-42.91:42.91\n19\t17745972\t844424:2\tA\t]19:17745327]A\t42\tPASS\tDISC_MAPQ=53;EVDNC=ASDIS;HOMSEQ=AAAAATTAGCTGGGTGTGGTGGTGGGTGCCTGTAGTCCCAGCTACT;MAPQ=60;MATEID=844424:1;MATENM=1;NM=2;NUMPARTS=2;SCTG=c_19_17738001_17763001_74C;SPAN=645;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:14:11:3.9:42.9,3.9,0:7:8:-42.91:42.91\n19\t18052042\t844540:1\tG\t]19:18069225]G\t12\tPASS\tDISC_MAPQ=255;EVDNC=ASDIS;HOMSEQ=G;MAPQ=60;MATEID=844540:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_19_18056501_18081501_131C;SPAN=17183;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:5:15:12.2:12.2,0,25.4:4:2:-12.29:12.54\n19\t18069225\t844540:2\tG\tG[19:18052042[\t12\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=G;MAPQ=60;MATEID=844540:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_19_18056501_18081501_131C;SPAN=17183;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:5:15:12.2:12.2,0,25.4:4:2:-12.29:12.54\n19\t19147213\t844918:1\tA\tA[19:19147484[\t47\tPASS\tEVDNC=ASSMB;HOMSEQ=AGGA;MAPQ=60;MATEID=844918:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_19_19134501_19159501_81C;SPAN=271;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:16:20:1.1:47.3,0,1.1:16:0:-49.48:49.48\n19\t19147484\t844918:2\tA\t]19:19147213]A\t47\tPASS\tEVDNC=ASSMB;HOMSEQ=AGGA;MAPQ=60;MATEID=844918:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_19_19134501_19159501_81C;SPAN=271;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:16:20:1.1:47.3,0,1.1:16:0:-49.48:49.48\n19\t20065920\t845168:1\tT\tT[19:20066218[\t69\tPASS\tEVDNC=ASSMB;HOMSEQ=TCAATCTATTCCT;MAPQ=60;MATEID=845168:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_19_20065501_20090501_12C;SPAN=298;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:23:22:6.3:69.3,6.3,0:23:0:-69.32:69.32\n19\t20066218\t845168:2\tT\t]19:20065920]T\t69\tPASS\tEVDNC=ASSMB;HOMSEQ=TCAATCTATTCCT;MAPQ=60;MATEID=845168:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_19_20065501_20090501_12C;SPAN=298;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:23:22:6.3:69.3,6.3,0:23:0:-69.32:69.32\n19\t20618462\t845443:1\tA\tA]19:20701122]\t26\tPASS\tDISC_MAPQ=51;EVDNC=DSCRD;IMPRECISE;MAPQ=51;MATEID=845443:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=19:20618462(+)-19:20701122(+)__19_20678001_20703001D;SPAN=82660;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:24:26.3:26.3,0,32.9:0:10:-26.26:26.32\n19\t20619278\t845444:1\tG\t[19:20700182[G\t59\tPASS\tDISC_MAPQ=29;EVDNC=DSCRD;IMPRECISE;MAPQ=29;MATEID=845444:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=19:20619278(-)-19:20700182(-)__19_20678001_20703001D;SPAN=80904;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:19:22:2.7:59.4,2.7,0:0:19:-60.34:60.34\n19\t20700182\t845444:2\tT\t[19:20619278[T\t59\tPASS\tDISC_MAPQ=56;EVDNC=DSCRD;IMPRECISE;MAPQ=56;MATEID=845444:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=19:20619278(-)-19:20700182(-)__19_20678001_20703001D;SPAN=80904;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:19:22:2.7:59.4,2.7,0:0:19:-60.34:60.34\n19\t20701122\t845443:2\tT\tT]19:20618462]\t26\tPASS\tDISC_MAPQ=33;EVDNC=DSCRD;IMPRECISE;MAPQ=33;MATEID=845443:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=19:20618462(+)-19:20701122(+)__19_20678001_20703001D;SPAN=82660;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:24:26.3:26.3,0,32.9:0:10:-26.26:26.32\n19\t21089889\t845809:1\tA\t]19:21151960]A\t32\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AGAAATTTGTACACTTTTGCCAGCATGCCAGGCTTCTGGG;MAPQ=60;MATEID=845809:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_19_21143501_21168501_7C;SPAN=62071;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:15:5.6:32,0,5.6:10:2:-33.15:33.15\n19\t21136664\t845806:1\tT\tT[19:21136820[\t20\tPASS\tEVDNC=ASSMB;HOMSEQ=AGAAT;MAPQ=60;MATEID=845806:2;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_19_21119001_21144001_97C;SPAN=156;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:21:20.6:20.6,0,30.5:8:0:-20.51:20.65\n19\t21136820\t845806:2\tA\t]19:21136664]A\t20\tPASS\tEVDNC=ASSMB;HOMSEQ=AGAAT;MAPQ=60;MATEID=845806:1;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_19_21119001_21144001_97C;SPAN=156;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:21:20.6:20.6,0,30.5:8:0:-20.51:20.65\n19\t21151960\t845809:2\tG\tG[19:21089889[\t32\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AGAAATTTGTACACTTTTGCCAGCATGCCAGGCTTCTGGG;MAPQ=60;MATEID=845809:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_19_21143501_21168501_7C;SPAN=62071;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:15:5.6:32,0,5.6:10:2:-33.15:33.15\n19\t21720254\t846251:1\tT\tT[19:21722766[\t23\tPASS\tEVDNC=ASSMB;HOMSEQ=TGTTAT;MAPQ=60;MATEID=846251:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_19_21707001_21732001_71C;SPAN=2512;SUBN=2;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:22:23.6:23.6,0,30.2:9:0:-23.53:23.59\n19\t21722766\t846251:2\tT\t]19:21720254]T\t23\tPASS\tEVDNC=ASSMB;HOMSEQ=TGTTAT;MAPQ=60;MATEID=846251:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_19_21707001_21732001_71C;SPAN=2512;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:22:23.6:23.6,0,30.2:9:0:-23.53:23.59\n19\t22958074\t846898:1\tC\tC[19:22960117[\t46\tPASS\tDISC_MAPQ=57;EVDNC=DSCRD;IMPRECISE;MAPQ=57;MATEID=846898:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=19:22958074(+)-19:22960117(-)__19_22956501_22981501D;SPAN=2043;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:16:1:4.2:46.2,4.2,0:0:16:-46.21:46.21\n19\t22960117\t846898:2\tC\t]19:22958074]C\t46\tPASS\tDISC_MAPQ=55;EVDNC=DSCRD;IMPRECISE;MAPQ=55;MATEID=846898:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=19:22958074(+)-19:22960117(-)__19_22956501_22981501D;SPAN=2043;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:16:1:4.2:46.2,4.2,0:0:16:-46.21:46.21\n19\t23379925\t847308:1\tA\tA]19:23799606]\t26\tPASS\tDISC_MAPQ=38;EVDNC=DSCRD;IMPRECISE;MAPQ=38;MATEID=847308:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=19:23379925(+)-19:23799606(+)__19_23789501_23814501D;SPAN=419681;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:9:5:2.4:26.4,2.4,0:0:9:-26.41:26.41\n19\t23622991\t847128:1\tC\tC[19:23625506[\t66\tPASS\tDISC_MAPQ=51;EVDNC=ASDIS;HOMSEQ=GGGTTCAAGCAATTCTCCTGCCTCAGCCTCCC;MAPQ=60;MATEID=847128:2;MATENM=3;NM=2;NUMPARTS=2;SCTG=c_19_23618001_23643001_15C;SPAN=2515;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:22:6:6:66,6,0:13:14:-66.02:66.02\n19\t23625506\t847128:2\tG\t]19:23622991]G\t66\tPASS\tDISC_MAPQ=48;EVDNC=ASDIS;HOMSEQ=GGGTTCAAGCAATTCTCCTGCCTCAGCCTCCC;MAPQ=60;MATEID=847128:1;MATENM=2;NM=3;NUMPARTS=2;SCTG=c_19_23618001_23643001_15C;SPAN=2515;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:22:6:6:66,6,0:13:14:-66.02:66.02\n19\t23753137\t847263:1\tG\t]19:23753636]G\t91\tPASS\tDISC_MAPQ=51;EVDNC=ASDIS;HOMSEQ=GCCTGTAATCCCAGCACTTTGGGAGGCTGAGGCAGG;MAPQ=60;MATEID=847263:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_19_23740501_23765501_17C;SPAN=499;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:31:39:5.6:91.4,0,5.6:22:16:-95.68:95.68\n19\t23753636\t847263:2\tG\tG[19:23753137[\t91\tPASS\tDISC_MAPQ=57;EVDNC=ASDIS;HOMSEQ=GCCTGTAATCCCAGCACTTTGGGAGGCTGAGGCAGG;MAPQ=60;MATEID=847263:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_19_23740501_23765501_17C;SPAN=499;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:31:39:5.6:91.4,0,5.6:22:16:-95.68:95.68\n19\t23799606\t847308:2\tA\tA]19:23379925]\t26\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=847308:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=19:23379925(+)-19:23799606(+)__19_23789501_23814501D;SPAN=419681;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:9:5:2.4:26.4,2.4,0:0:9:-26.41:26.41\n19\t23845125\t847363:2\tC\tC]1:28189261]\t23\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=847363:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:28189261(+)-19:23845125(+)__19_23838501_23863501D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:22:23.6:23.6,0,30.2:0:9:-23.53:23.59\n19\t23872785\t847437:1\tT\tT[19:23967785[\t44\tPASS\tDISC_MAPQ=58;EVDNC=DSCRD;IMPRECISE;MAPQ=58;MATEID=847437:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=19:23872785(+)-19:23967785(-)__19_23961001_23986001D;SPAN=95000;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:15:20:4.4:44,0,4.4:0:15:-45.49:45.49\n19\t23873150\t847438:1\tA\t]19:23968297]A\t75\tPASS\tDISC_MAPQ=59;EVDNC=DSCRD;IMPRECISE;MAPQ=59;MATEID=847438:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=19:23873150(-)-19:23968297(+)__19_23961001_23986001D;SPAN=95147;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:25:17:6.9:75.9,6.9,0:0:25:-75.92:75.92\n19\t23967785\t847437:2\tG\t]19:23872785]G\t44\tPASS\tDISC_MAPQ=58;EVDNC=DSCRD;IMPRECISE;MAPQ=58;MATEID=847437:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=19:23872785(+)-19:23967785(-)__19_23961001_23986001D;SPAN=95000;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:15:20:4.4:44,0,4.4:0:15:-45.49:45.49\n19\t23968297\t847438:2\tA\tA[19:23873150[\t75\tPASS\tDISC_MAPQ=57;EVDNC=DSCRD;IMPRECISE;MAPQ=57;MATEID=847438:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=19:23873150(-)-19:23968297(+)__19_23961001_23986001D;SPAN=95147;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:25:17:6.9:75.9,6.9,0:0:25:-75.92:75.92\n19\t24358987\t847575:1\tT\tT[19:24359111[\t99\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=GCATTGAGGCCTATGGTGAAAAAGGAAATATCT;MAPQ=60;MATEID=847575:2;MATENM=2;NM=3;NUMPARTS=2;SCTG=c_19_24353001_24378001_44C;SPAN=124;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:34:46:13.7:99.5,0,13.7:29:5:-102.7:102.7\n19\t24359111\t847575:2\tG\t]19:24358987]G\t99\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=GCATTGAGGCCTATGGTGAAAAAGGAAATATCT;MAPQ=60;MATEID=847575:1;MATENM=3;NM=2;NUMPARTS=2;SCTG=c_19_24353001_24378001_44C;SPAN=124;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:34:46:13.7:99.5,0,13.7:29:5:-102.7:102.7\n19\t24895890\t847832:1\tN\t]19:24896879]N\t16\tPASS\tDISC_MAPQ=44;EVDNC=DSCRD;IMPRECISE;MAPQ=44;MATEID=847832:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=19:24895890(-)-19:24896879(+)__19_24892001_24917001D;SPAN=989;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:47:16.7:16.7,0,99.2:0:9:-16.5:20.04\n19\t24896321\t847840:1\tA\t]19:24897433]A\t10\tPASS\tDISC_MAPQ=15;EVDNC=DSCRD;IMPRECISE;MAPQ=15;MATEID=847840:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=19:24896321(-)-19:24897433(+)__19_24892001_24917001D;SPAN=1112;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:16:150:10.6:10.6,0,367.1:0:16:-10.65:31.23\n19\t24896648\t847842:1\tC\tC[19:24897605[\t6\tPASS\tDISC_MAPQ=15;EVDNC=DSCRD;IMPRECISE;MAPQ=15;MATEID=847842:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=19:24896648(+)-19:24897605(-)__19_24892001_24917001D;SPAN=957;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:129:6.8:6.8,0,317:0:13:-6.652:25.03\n19\t24896879\t847832:2\tG\tG[19:24895890[\t16\tPASS\tDISC_MAPQ=35;EVDNC=DSCRD;IMPRECISE;MAPQ=35;MATEID=847832:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=19:24895890(-)-19:24896879(+)__19_24892001_24917001D;SPAN=989;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:47:16.7:16.7,0,99.2:0:9:-16.5:20.04\n19\t24896904\t847754:2\tA\tA[5:47172599[\t41\tPASS\tDISC_MAPQ=45;EVDNC=DSCRD;IMPRECISE;MAPQ=45;MATEID=847754:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:47172599(-)-19:24896904(+)__19_24892001_24917001D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:17:54:41:41,0,93.8:0:17:-40.94:42.13\n19\t24897340\t847848:1\tT\t]19:27249403]T\t99\tPASS\tDISC_MAPQ=46;EVDNC=ASDIS;HOMSEQ=TTCCTTTAGACAGAGCAGATTTGAAACACTCTTTTTGTGGAATTTG;MAPQ=60;MATEID=847848:2;MATENM=12;NM=1;NUMPARTS=2;SCTG=c_19_24892001_24917001_37C;SPAN=2352063;SUBN=1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:60:90:53.9:172.7,0,53.9:52:10:-176.2:176.2\n19\t24897433\t847840:2\tA\tA[19:24896321[\t10\tPASS\tDISC_MAPQ=39;EVDNC=DSCRD;IMPRECISE;MAPQ=39;MATEID=847840:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=19:24896321(-)-19:24897433(+)__19_24892001_24917001D;SPAN=1112;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:16:150:10.6:10.6,0,367.1:0:16:-10.65:31.23\n19\t24897605\t847842:2\tT\t]19:24896648]T\t6\tPASS\tDISC_MAPQ=29;EVDNC=DSCRD;IMPRECISE;MAPQ=29;MATEID=847842:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=19:24896648(+)-19:24897605(-)__19_24892001_24917001D;SPAN=957;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:129:6.8:6.8,0,317:0:13:-6.652:25.03\n19\t27240874\t847883:2\tN\t]16:36353193]N\t26\tPASS\tDISC_MAPQ=42;EVDNC=DSCRD;IMPRECISE;MAPQ=42;MATEID=847883:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=16:36353193(+)-19:27240874(-)__19_27219501_27244501D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:9:3:2.4:26.4,2.4,0:0:9:-26.41:26.41\n19\t27249403\t847848:2\tG\tG[19:24897340[\t99\tPASS\tDISC_MAPQ=2;EVDNC=ASDIS;HOMSEQ=TTCCTTTAGACAGAGCAGATTTGAAACACTCTTTTTGTGGAATTTG;MAPQ=60;MATEID=847848:1;MATENM=1;NM=12;NUMPARTS=2;SCTG=c_19_24892001_24917001_37C;SPAN=2352063;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:60:90:53.9:172.7,0,53.9:52:10:-176.2:176.2\n19\t27310510\t848031:1\tA\t]19:27315694]A\t99\tPASS\tDISC_MAPQ=58;EVDNC=ASDIS;HOMSEQ=AGTTGAACCTATCTTTTGATAGAGCAGTTTTGAAACTCTCTTTTTGTAGAATCTCCAAGTGGATA;MAPQ=60;MATEID=848031:2;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_19_27293001_27318001_61C;SPAN=5184;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:37:36:10.2:112.2,10.2,0:22:18:-112.2:112.2\n19\t27315694\t848031:2\tA\tA[19:27310510[\t99\tPASS\tDISC_MAPQ=56;EVDNC=ASDIS;HOMSEQ=AGTTGAACCTATCTTTTGATAGAGCAGTTTTGAAACTCTCTTTTTGTAGAATCTCCAAGTGGATA;MAPQ=60;MATEID=848031:1;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_19_27293001_27318001_61C;SPAN=5184;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:37:36:10.2:112.2,10.2,0:22:18:-112.2:112.2\n19\t27339321\t848102:1\tT\t]19:27339693]T\t33\tPASS\tDISC_MAPQ=50;EVDNC=ASDIS;HOMSEQ=TTTCCAAACTTCTCAATCAAAAGAAAGGTTC;MAPQ=60;MATEID=848102:2;MATENM=3;NM=5;NUMPARTS=2;SCTG=c_19_27317501_27342501_13C;SPAN=372;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:22:139:33.8:33.8,0,314.3:22:2:-33.55:46.99\n19\t27339693\t848102:2\tC\tC[19:27339321[\t33\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TTTCCAAACTTCTCAATCAAAAGAAAGGTTC;MAPQ=60;MATEID=848102:1;MATENM=5;NM=3;NUMPARTS=2;SCTG=c_19_27317501_27342501_13C;SPAN=372;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:22:139:33.8:33.8,0,314.3:22:2:-33.55:46.99\n19\t27363523\t848281:1\tG\tG[19:27397934[\t99\tPASS\tDISC_MAPQ=56;EVDNC=ASDIS;HOMSEQ=ATGTGAAGATATTTCCTTTTTCACCATAG;MAPQ=60;MATEID=848281:2;MATENM=2;NM=8;NUMPARTS=2;SCTG=c_19_27342001_27367001_569C;SPAN=34411;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:55:47:15.3:168.3,15.3,0:39:19:-168.3:168.3\n19\t27365941\t876115:1\tT\t[20:30926139[T\t68\tPASS\tDISC_MAPQ=255;EVDNC=TSI_L;HOMSEQ=TGCATATTCTACAGAAAGACTGTTTCCAAA;MAPQ=60;MATEID=876115:2;MATENM=5;NM=0;NUMPARTS=3;REPSEQ=TT;SCTG=c_20_30919001_30944001_257C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:29:98:68.3:68.3,0,177.2:26:4:-68.18:70.92\n19\t27377200\t848414:1\tG\tG[19:27377491[\t99\tPASS\tDISC_MAPQ=55;EVDNC=ASDIS;HOMSEQ=GAAATATCTTCACATAAAAACTACACAGAAGCATTCTGAGAAACTTCCTTG;MAPQ=60;MATEID=848414:2;MATENM=3;NM=10;NUMPARTS=2;SCTG=c_19_27366501_27391501_648C;SPAN=291;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:41:79:83.6:113.3,0,83.6:18:23:-113.3:113.3\n19\t27377491\t848414:2\tG\t]19:27377200]G\t99\tPASS\tDISC_MAPQ=54;EVDNC=ASDIS;HOMSEQ=GAAATATCTTCACATAAAAACTACACAGAAGCATTCTGAGAAACTTCCTTG;MAPQ=60;MATEID=848414:1;MATENM=10;NM=3;NUMPARTS=2;SCTG=c_19_27366501_27391501_648C;SPAN=291;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:41:79:83.6:113.3,0,83.6:18:23:-113.3:113.3\n19\t27388979\t848453:1\tT\tT[19:27389239[\t6\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=848453:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_19_27366501_27391501_76C;SPAN=260;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:96:6.2:6.2,0,233.9:10:0:-6.025:19.41\n19\t27389239\t848453:2\tT\t]19:27388979]T\t6\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=848453:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_19_27366501_27391501_76C;SPAN=260;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:96:6.2:6.2,0,233.9:10:0:-6.025:19.41\n19\t27390865\t848460:1\tG\tG[19:27391462[\t99\tPASS\tDISC_MAPQ=56;EVDNC=ASDIS;HOMSEQ=ATATTTGGAGCGCTTTGAGGTCTATGGTGAAAAAGGAACTATCTTCACATTAAACCTAGACAGAATGATTCTGAGAAACTTCTTTG;MAPQ=60;MATEID=848460:2;MATENM=9;NM=8;NUMPARTS=2;SCTG=c_19_27366501_27391501_740C;SPAN=597;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:65:48:18:198,18,0:21:49:-198:198\n19\t27391462\t848460:2\tA\t]19:27390865]A\t99\tPASS\tDISC_MAPQ=49;EVDNC=ASDIS;HOMSEQ=ATATTTGGAGCGCTTTGAGGTCTATGGTGAAAAAGGAACTATCTTCACATTAAACCTAGACAGAATGATTCTGAGAAACTTCTTTG;MAPQ=60;MATEID=848460:1;MATENM=8;NM=9;NUMPARTS=2;SCTG=c_19_27366501_27391501_740C;SPAN=597;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:65:48:18:198,18,0:21:49:-198:198\n19\t27397934\t848281:2\tA\t]19:27363523]A\t99\tPASS\tDISC_MAPQ=255;EVDNC=ASDIS;HOMSEQ=ATGTGAAGATATTTCCTTTTTCACCATAG;MAPQ=60;MATEID=848281:1;MATENM=8;NM=2;NUMPARTS=2;SCTG=c_19_27342001_27367001_569C;SPAN=34411;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:55:47:15.3:168.3,15.3,0:39:19:-168.3:168.3\n19\t27470475\t848602:1\tA\tA[19:27472339[\t82\tPASS\tEVDNC=ASSMB;HOMSEQ=CTTTTACACCATAGGCCTCA;MAPQ=60;MATEID=848602:2;MATENM=3;NM=2;NUMPARTS=2;SCTG=c_19_27464501_27489501_4C;SPAN=1864;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:27:12:7.5:82.5,7.5,0:27:0:-82.52:82.52\n19\t27472339\t848602:2\tC\t]19:27470475]C\t82\tPASS\tEVDNC=ASSMB;HOMSEQ=CTTTTACACCATAGGCCTCA;MAPQ=60;MATEID=848602:1;MATENM=2;NM=3;NUMPARTS=2;SCTG=c_19_27464501_27489501_4C;SPAN=1864;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:27:12:7.5:82.5,7.5,0:27:0:-82.52:82.52\n19\t29459396\t849209:1\tT\tT[19:29465260[\t42\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=849209:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=19:29459396(+)-19:29465260(-)__19_29449001_29474001D;SPAN=5864;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:14:10:3.9:42.9,3.9,0:0:14:-42.91:42.91\n19\t29465260\t849209:2\tA\t]19:29459396]A\t42\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=849209:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=19:29459396(+)-19:29465260(-)__19_29449001_29474001D;SPAN=5864;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:14:10:3.9:42.9,3.9,0:0:14:-42.91:42.91\n19\t29897897\t849377:1\tT\tT[19:29902194[\t79\tPASS\tEVDNC=ASSMB;HOMSEQ=TAATTTTTATTTTT;MAPQ=60;MATEID=849377:2;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_19_29890001_29915001_36C;SPAN=4297;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:24:26:7.2:79.2,7.2,0:24:0:-78.56:78.56\n19\t29902194\t849377:2\tT\t]19:29897897]T\t79\tPASS\tEVDNC=ASSMB;HOMSEQ=TAATTTTTATTTTT;MAPQ=60;MATEID=849377:1;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_19_29890001_29915001_36C;SPAN=4297;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:24:26:7.2:79.2,7.2,0:24:0:-78.56:78.56\n19\t30526433\t849550:1\tC\tC[19:30526744[\t58\tPASS\tEVDNC=ASSMB;HOMSEQ=AAGAAC;MAPQ=60;MATEID=849550:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_19_30502501_30527501_43C;SPAN=311;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:20:27:8.9:58.4,0,8.9:20:0:-60.44:60.44\n19\t30526744\t849550:2\tA\t]19:30526433]A\t58\tPASS\tEVDNC=ASSMB;HOMSEQ=AAGAAC;MAPQ=60;MATEID=849550:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_19_30502501_30527501_43C;SPAN=311;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:20:27:8.9:58.4,0,8.9:20:0:-60.44:60.44\n19\t32019277\t669546:2\tA\tA[13:49318685[\t49\tPASS\tDISC_MAPQ=7;EVDNC=ASDIS;MAPQ=60;MATEID=669546:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_13_49294001_49319001_26C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:17:7:4.5:49.5,4.5,0:14:5:-49.51:49.51\n19\t32596050\t850106:1\tC\t]19:32596653]C\t36\tPASS\tDISC_MAPQ=59;EVDNC=DSCRD;IMPRECISE;MAPQ=59;MATEID=850106:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=19:32596050(-)-19:32596653(+)__19_32585001_32610001D;SPAN=603;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:22:17:36.8,0,17:0:13:-37.05:37.05\n19\t32596653\t850106:2\tA\tA[19:32596050[\t36\tPASS\tDISC_MAPQ=56;EVDNC=DSCRD;IMPRECISE;MAPQ=56;MATEID=850106:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=19:32596050(-)-19:32596653(+)__19_32585001_32610001D;SPAN=603;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:22:17:36.8,0,17:0:13:-37.05:37.05\n19\t33249724\t850374:1\tA\t]19:33250465]A\t63\tPASS\tDISC_MAPQ=30;EVDNC=DSCRD;IMPRECISE;MAPQ=30;MATEID=850374:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=19:33249724(-)-19:33250465(+)__19_33246501_33271501D;SPAN=741;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:23:44:47:63.5,0,47:0:23:-63.68:63.68\n19\t33250465\t850374:2\tC\tC[19:33249724[\t63\tPASS\tDISC_MAPQ=49;EVDNC=DSCRD;IMPRECISE;MAPQ=49;MATEID=850374:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=19:33249724(-)-19:33250465(+)__19_33246501_33271501D;SPAN=741;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:23:44:47:63.5,0,47:0:23:-63.68:63.68\n19\t34392184\t850796:1\tT\t]Un_KN707807v1_decoy:4616]T\t44\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=850796:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_19_34373501_34398501_126C;SPAN=-1;SUBN=1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:16:32:34.1:44,0,34.1:16:0:-43.85:43.85\n19\t36555293\t851508:1\tT\tT[19:36555596[\t52\tPASS\tEVDNC=ASSMB;HOMSEQ=GCGATAAAGTTTTT;MAPQ=60;MATEID=851508:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_19_36554001_36579001_38C;SPAN=303;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:18:16:4.8:52.8,4.8,0:18:0:-52.81:52.81\n19\t36555596\t851508:2\tG\t]19:36555293]G\t52\tPASS\tEVDNC=ASSMB;HOMSEQ=GCGATAAAGTTTTT;MAPQ=60;MATEID=851508:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_19_36554001_36579001_38C;SPAN=303;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:18:16:4.8:52.8,4.8,0:18:0:-52.81:52.81\n19\t38146650\t852018:1\tC\t]19:38163477]C\t45\tPASS\tDISC_MAPQ=57;EVDNC=ASDIS;HOMSEQ=CAGAGTG;MAPQ=60;MATEID=852018:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_19_38146501_38171501_2C;SPAN=16827;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:16:27:22.1:45.2,0,22.1:11:12:-45.63:45.63\n19\t38163477\t852018:2\tG\tG[19:38146650[\t45\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=CAGAGTG;MAPQ=60;MATEID=852018:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_19_38146501_38171501_2C;SPAN=16827;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:16:27:22.1:45.2,0,22.1:11:12:-45.63:45.63\n19\t39766920\t852503:1\tT\tT[19:39767211[\t18\tPASS\tEVDNC=ASSMB;HOMSEQ=GCATCAGCGATATTTT;MAPQ=60;MATEID=852503:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_19_39763501_39788501_48C;SPAN=291;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:7:16:18.8:18.8,0,18.8:7:0:-18.61:18.62\n19\t39767211\t852503:2\tG\t]19:39766920]G\t18\tPASS\tEVDNC=ASSMB;HOMSEQ=GCATCAGCGATATTTT;MAPQ=60;MATEID=852503:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_19_39763501_39788501_48C;SPAN=291;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:7:16:18.8:18.8,0,18.8:7:0:-18.61:18.62\n19\t40107197\t852673:1\tT\tT[19:40109854[\t40\tPASS\tEVDNC=ASSMB;HOMSEQ=CCAATTAATAGTTTT;MAPQ=60;MATEID=852673:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_19_40106501_40131501_40C;SPAN=2657;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:15:34:40.1:40.1,0,43.4:15:0:-39.96:39.98\n19\t40109854\t852673:2\tC\t]19:40107197]C\t40\tPASS\tEVDNC=ASSMB;HOMSEQ=CCAATTAATAGTTTT;MAPQ=60;MATEID=852673:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_19_40106501_40131501_40C;SPAN=2657;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:15:34:40.1:40.1,0,43.4:15:0:-39.96:39.98\n19\t41102820\t852998:1\tC\tC[19:41104286[\t47\tPASS\tEVDNC=ASSMB;HOMSEQ=AGAAAACCCCAACATCTC;MAPQ=60;MATEID=852998:2;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_19_41086501_41111501_76C;SPAN=1466;SUBN=1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:16:21:4.1:47,0,4.1:16:0:-48.75:48.75\n19\t41104286\t852998:2\tA\t]19:41102820]A\t47\tPASS\tEVDNC=ASSMB;HOMSEQ=AGAAAACCCCAACATCTC;MAPQ=60;MATEID=852998:1;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_19_41086501_41111501_76C;SPAN=1466;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:16:21:4.1:47,0,4.1:16:0:-48.75:48.75\n19\t41643872\t853216:1\tG\tG[19:41646305[\t72\tPASS\tEVDNC=ASSMB;HOMSEQ=AAGATATAAGATTAG;MAPQ=60;MATEID=853216:2;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_19_41625501_41650501_37C;SPAN=2433;SUBN=2;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:24:15:6.6:72.6,6.6,0:24:0:-72.62:72.62\n19\t41646305\t853216:2\tA\t]19:41643872]A\t72\tPASS\tEVDNC=ASSMB;HOMSEQ=AAGATATAAGATTAG;MAPQ=60;MATEID=853216:1;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_19_41625501_41650501_37C;SPAN=2433;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:24:15:6.6:72.6,6.6,0:24:0:-72.62:72.62\n19\t41803700\t853279:1\tT\tT[19:41807214[\t47\tPASS\tEVDNC=ASSMB;INSERTION=A;MAPQ=60;MATEID=853279:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_19_41797001_41822001_21C;SPAN=3514;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:17:30:27.8:47.6,0,27.8:17:0:-47.96:47.96\n19\t41803763\t853281:1\tG\t]19:41807383]G\t69\tPASS\tEVDNC=ASSMB;INSERTION=CCCA;MAPQ=60;MATEID=853281:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_19_41797001_41822001_4C;SPAN=3620;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:24:34:13.7:69.8,0,13.7:24:0:-71.56:71.56\n19\t41807214\t853279:2\tC\t]19:41803700]C\t47\tPASS\tEVDNC=ASSMB;INSERTION=A;MAPQ=60;MATEID=853279:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_19_41797001_41822001_21C;SPAN=3514;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:17:30:27.8:47.6,0,27.8:17:0:-47.96:47.96\n19\t41807383\t853281:2\tG\tG[19:41803763[\t69\tPASS\tEVDNC=ASSMB;INSERTION=CCCA;MAPQ=60;MATEID=853281:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_19_41797001_41822001_4C;SPAN=3620;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:24:34:13.7:69.8,0,13.7:24:0:-71.56:71.56\n19\t43679334\t853729:1\tT\t]19:43679927]T\t99\tPASS\tDISC_MAPQ=55;EVDNC=ASDIS;HOMSEQ=TGGTGG;MAPQ=60;MATEID=853729:2;MATENM=5;NM=1;NUMPARTS=2;SCTG=c_19_43659001_43684001_3C;SPAN=593;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:46:63:22.1:134.3,0,22.1:35:23:-138.4:138.4\n19\t43679927\t853729:2\tG\tG[19:43679334[\t99\tPASS\tDISC_MAPQ=49;EVDNC=ASDIS;HOMSEQ=TGGTGG;MAPQ=60;MATEID=853729:1;MATENM=1;NM=5;NUMPARTS=2;SCTG=c_19_43659001_43684001_3C;SPAN=593;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:46:63:22.1:134.3,0,22.1:35:23:-138.4:138.4\n19\t44546246\t854019:1\tT\tT[19:44546891[\t56\tPASS\tEVDNC=ASSMB;HOMSEQ=GGTGGCATATAATATTTTT;MAPQ=60;MATEID=854019:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_19_44541001_44566001_22C;SPAN=645;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:23:70:56.3:56.3,0,119:23:0:-56.25:57.52\n19\t44546891\t854019:2\tG\t]19:44546246]G\t56\tPASS\tEVDNC=ASSMB;HOMSEQ=GGTGGCATATAATATTTTT;MAPQ=60;MATEID=854019:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_19_44541001_44566001_22C;SPAN=645;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:23:70:56.3:56.3,0,119:23:0:-56.25:57.52\n19\t45635085\t854386:1\tA\tA[19:45635362[\t35\tPASS\tEVDNC=ASSMB;HOMSEQ=CTCCTGACCTCA;MAPQ=60;MATEID=854386:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_19_45619001_45644001_40C;SPAN=277;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:15:2.3:35.3,0,2.3:12:0:-37.11:37.11\n19\t45635362\t854386:2\tC\t]19:45635085]C\t35\tPASS\tEVDNC=ASSMB;HOMSEQ=CTCCTGACCTCA;MAPQ=60;MATEID=854386:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_19_45619001_45644001_40C;SPAN=277;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:15:2.3:35.3,0,2.3:12:0:-37.11:37.11\n19\t46275906\t854976:1\tG\t[19:47396150[G\t23\tPASS\tDISC_MAPQ=42;EVDNC=DSCRD;IMPRECISE;MAPQ=42;MATEID=854976:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=19:46275906(-)-19:47396150(-)__19_47383001_47408001D;SPAN=1120244;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:22:23.6:23.6,0,30.2:0:9:-23.53:23.59\n19\t47025044\t854871:1\tC\tC[19:47025446[\t82\tPASS\tDISC_MAPQ=53;EVDNC=ASDIS;HOMSEQ=TTTTGTATTTTTAGTAGAGATGGGGTTTCACCATGTTGGTCAGGCTGGTCTCAAACTCCTGACCTC;MAPQ=60;MATEID=854871:2;MATENM=2;NM=2;NUMPARTS=2;SCTG=c_19_47015501_47040501_6C;SPAN=402;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:27:5:7.5:82.5,7.5,0:15:18:-82.52:82.52\n19\t47025446\t854871:2\tT\t]19:47025044]T\t82\tPASS\tDISC_MAPQ=52;EVDNC=ASDIS;HOMSEQ=TTTTGTATTTTTAGTAGAGATGGGGTTTCACCATGTTGGTCAGGCTGGTCTCAAACTCCTGACCTC;MAPQ=60;MATEID=854871:1;MATENM=2;NM=2;NUMPARTS=2;SCTG=c_19_47015501_47040501_6C;SPAN=402;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:27:5:7.5:82.5,7.5,0:15:18:-82.52:82.52\n19\t47396150\t854976:2\tA\t[19:46275906[A\t23\tPASS\tDISC_MAPQ=33;EVDNC=DSCRD;IMPRECISE;MAPQ=33;MATEID=854976:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=19:46275906(-)-19:47396150(-)__19_47383001_47408001D;SPAN=1120244;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:22:23.6:23.6,0,30.2:0:9:-23.53:23.59\n19\t47419531\t996298:1\tT\t]Un_JTFH01000178v1_decoy:2767]T\t49\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=996298:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_1021_1_2767_3C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:17:5:4.5:49.5,4.5,0:17:0:-49.51:49.51\n19\t49078709\t855632:1\tT\tT[19:49079002[\t52\tPASS\tEVDNC=ASSMB;HOMSEQ=TATTTTATTTATTT;MAPQ=60;MATEID=855632:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_19_49073501_49098501_54C;SPAN=293;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:18:16:4.8:52.8,4.8,0:18:0:-52.81:52.81\n19\t49079002\t855632:2\tT\t]19:49078709]T\t52\tPASS\tEVDNC=ASSMB;HOMSEQ=TATTTTATTTATTT;MAPQ=60;MATEID=855632:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_19_49073501_49098501_54C;SPAN=293;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:18:16:4.8:52.8,4.8,0:18:0:-52.81:52.81\n19\t50574634\t856125:1\tT\tT[19:50579255[\t27\tPASS\tEVDNC=ASSMB;HOMSEQ=CT;MAPQ=60;MATEID=856125:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_19_50568001_50593001_52C;SPAN=4621;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:21:23.9:27.2,0,23.9:10:0:-27.11:27.11\n19\t50579255\t856125:2\tC\t]19:50574634]C\t27\tPASS\tEVDNC=ASSMB;HOMSEQ=CT;MAPQ=60;MATEID=856125:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_19_50568001_50593001_52C;SPAN=4621;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:21:23.9:27.2,0,23.9:10:0:-27.11:27.11\n19\t50901191\t856299:1\tC\t]19:50982831]C\t23\tPASS\tEVDNC=ASSMB;HOMSEQ=CCTCAG;MAPQ=60;MATEID=856299:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_19_50960001_50985001_105C;SPAN=81640;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:8:5:2.1:23.1,2.1,0:8:0:-23.11:23.11\n19\t50903593\t856267:1\tT\tT[19:50905076[\t72\tPASS\tDISC_MAPQ=55;EVDNC=ASDIS;HOMSEQ=GAGTAGCTGGGATTACAGGCACCTGCCACTATGCCTGGCTAATTTTGGTATTTTTAGTAGAGACGGGGTTTCACCATGTTGGCCAGGCTGGTCT;MAPQ=60;MATEID=856267:2;MATENM=0;NM=34;NUMPARTS=2;SCTG=c_19_50886501_50911501_46C;SPAN=1483;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:24:12:6.6:72.6,6.6,0:6:20:-72.62:72.62\n19\t50905076\t856267:2\tG\t]19:50903593]G\t72\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=GAGTAGCTGGGATTACAGGCACCTGCCACTATGCCTGGCTAATTTTGGTATTTTTAGTAGAGACGGGGTTTCACCATGTTGGCCAGGCTGGTCT;MAPQ=60;MATEID=856267:1;MATENM=34;NM=0;NUMPARTS=2;SCTG=c_19_50886501_50911501_46C;SPAN=1483;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:24:12:6.6:72.6,6.6,0:6:20:-72.62:72.62\n19\t50982831\t856299:2\tG\tG[19:50901191[\t23\tPASS\tEVDNC=ASSMB;HOMSEQ=CCTCAG;MAPQ=60;MATEID=856299:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_19_50960001_50985001_105C;SPAN=81640;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:8:5:2.1:23.1,2.1,0:8:0:-23.11:23.11\n19\t51273153\t856400:1\tT\tT[19:51273448[\t20\tPASS\tEVDNC=ASSMB;HOMSEQ=AAGAATTACCACAACTT;MAPQ=60;MATEID=856400:2;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_19_51254001_51279001_69C;SPAN=295;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:20:20.9:20.9,0,27.5:8:0:-20.79:20.87\n19\t51273448\t856400:2\tA\t]19:51273153]A\t20\tPASS\tEVDNC=ASSMB;HOMSEQ=AAGAATTACCACAACTT;MAPQ=60;MATEID=856400:1;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_19_51254001_51279001_69C;SPAN=295;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:20:20.9:20.9,0,27.5:8:0:-20.79:20.87\n19\t51672799\t856558:1\tG\tG[19:51674260[\t99\tPASS\tDISC_MAPQ=53;EVDNC=DSCRD;IMPRECISE;MAPQ=53;MATEID=856558:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=19:51672799(+)-19:51674260(-)__19_51670501_51695501D;SPAN=1461;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:35:7:9.6:105.6,9.6,0:0:35:-105.6:105.6\n19\t51674260\t856558:2\tA\t]19:51672799]A\t99\tPASS\tDISC_MAPQ=47;EVDNC=DSCRD;IMPRECISE;MAPQ=47;MATEID=856558:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=19:51672799(+)-19:51674260(-)__19_51670501_51695501D;SPAN=1461;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:35:7:9.6:105.6,9.6,0:0:35:-105.6:105.6\n19\t51825382\t856668:1\tT\t[19:52243049[T\t11\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;MAPQ=60;MATEID=856668:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_19_52234001_52259001_18C;SPAN=417667;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:5:17:11.9:11.9,0,28.4:2:3:-11.73:12.21\n19\t52243049\t856668:2\tG\t[19:51825382[G\t11\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;MAPQ=60;MATEID=856668:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_19_52234001_52259001_18C;SPAN=417667;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:5:17:11.9:11.9,0,28.4:2:3:-11.73:12.21\n19\t52350629\t856711:1\tG\tG[19:52350932[\t24\tPASS\tEVDNC=ASSMB;HOMSEQ=GGAGGCTGCAGTGAGCCAAG;MAPQ=60;MATEID=856711:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_19_52332001_52357001_48C;SPAN=303;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:43:24.2:24.2,0,83.6:11:0:-24.22:26.08\n19\t52350932\t856711:2\tG\t]19:52350629]G\t24\tPASS\tEVDNC=ASSMB;HOMSEQ=GGAGGCTGCAGTGAGCCAAG;MAPQ=60;MATEID=856711:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_19_52332001_52357001_48C;SPAN=303;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:43:24.2:24.2,0,83.6:11:0:-24.22:26.08\n19\t52592887\t856849:1\tA\tA[19:52594355[\t82\tPASS\tDISC_MAPQ=58;EVDNC=DSCRD;IMPRECISE;MAPQ=58;MATEID=856849:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=19:52592887(+)-19:52594355(-)__19_52577001_52602001D;SPAN=1468;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:27:7:7.5:82.5,7.5,0:0:27:-82.52:82.52\n19\t52594355\t856849:2\tA\t]19:52592887]A\t82\tPASS\tDISC_MAPQ=47;EVDNC=DSCRD;IMPRECISE;MAPQ=47;MATEID=856849:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=19:52592887(+)-19:52594355(-)__19_52577001_52602001D;SPAN=1468;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:27:7:7.5:82.5,7.5,0:0:27:-82.52:82.52\n19\t52918961\t857052:1\tT\tT[19:52920955[\t19\tPASS\tEVDNC=ASSMB;HOMSEQ=AAAAAAAAAAAAAATCT;MAPQ=60;MATEID=857052:2;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_19_52920001_52945001_46C;SPAN=1994;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:73:19.1:19.1,0,164.3:12:0:-19.09:25.85\n19\t52920955\t857052:2\tA\t]19:52918961]A\t19\tPASS\tEVDNC=ASSMB;HOMSEQ=AAAAAAAAAAAAAATCT;MAPQ=60;MATEID=857052:1;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_19_52920001_52945001_46C;SPAN=1994;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:73:19.1:19.1,0,164.3:12:0:-19.09:25.85\n19\t53185924\t857218:1\tT\tT[19:53188699[\t83\tPASS\tEVDNC=ASSMB;HOMSEQ=GGGTTTTT;MAPQ=60;MATEID=857218:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_19_53165001_53190001_68C;SPAN=2775;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:29:44:27.2:83.3,0,27.2:29:0:-84.92:84.92\n19\t53188699\t857218:2\tG\t]19:53185924]G\t83\tPASS\tEVDNC=ASSMB;HOMSEQ=GGGTTTTT;MAPQ=60;MATEID=857218:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_19_53165001_53190001_68C;SPAN=2775;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:29:44:27.2:83.3,0,27.2:29:0:-84.92:84.92\n19\t53433460\t857385:1\tC\tC[19:53470214[\t73\tPASS\tEVDNC=ASSMB;HOMSEQ=TGTCTGGAGCCCATTTCTTTGGCTTCGACTTCGC;MAPQ=60;MATEID=857385:2;MATENM=3;NM=0;NUMPARTS=2;SCTG=c_19_53459001_53484001_53C;SPAN=36754;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:25:33:7.4:73.4,0,7.4:25:0:-76.04:76.04\n19\t53442835\t857387:1\tG\t]19:53480335]G\t28\tPASS\tDISC_MAPQ=57;EVDNC=DSCRD;IMPRECISE;MAPQ=57;MATEID=857387:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=19:53442835(-)-19:53480335(+)__19_53459001_53484001D;SPAN=37500;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:16:8.9:28.7,0,8.9:0:10:-28.89:28.89\n19\t53470214\t857385:2\tT\t]19:53433460]T\t73\tPASS\tEVDNC=ASSMB;HOMSEQ=TGTCTGGAGCCCATTTCTTTGGCTTCGACTTCGC;MAPQ=60;MATEID=857385:1;MATENM=0;NM=3;NUMPARTS=2;SCTG=c_19_53459001_53484001_53C;SPAN=36754;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:25:33:7.4:73.4,0,7.4:25:0:-76.04:76.04\n19\t53480335\t857387:2\tT\tT[19:53442835[\t28\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=857387:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=19:53442835(-)-19:53480335(+)__19_53459001_53484001D;SPAN=37500;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:16:8.9:28.7,0,8.9:0:10:-28.89:28.89\n19\t54052300\t857659:1\tA\tA[19:54057389[\t56\tPASS\tEVDNC=ASSMB;HOMSEQ=CCTGTACTCCCAGCTACTTGGGAGGCTGA;MAPQ=60;MATEID=857659:2;MATENM=0;NM=4;NUMPARTS=2;SCTG=c_19_54047001_54072001_22C;SPAN=5089;SUBN=5;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:19:11:5.1:56.1,5.1,0:19:0:-56.11:56.11\n19\t54057389\t857659:2\tC\t]19:54052300]C\t56\tPASS\tEVDNC=ASSMB;HOMSEQ=CCTGTACTCCCAGCTACTTGGGAGGCTGA;MAPQ=60;MATEID=857659:1;MATENM=4;NM=0;NUMPARTS=2;SCTG=c_19_54047001_54072001_22C;SPAN=5089;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:19:11:5.1:56.1,5.1,0:19:0:-56.11:56.11\n19\t54964364\t858158:1\tC\t]19:54965577]C\t20\tPASS\tDISC_MAPQ=51;EVDNC=DSCRD;IMPRECISE;MAPQ=51;MATEID=858158:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=19:54964364(-)-19:54965577(+)__19_54953501_54978501D;SPAN=1213;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:32:20.9:20.9,0,57.2:0:9:-20.71:21.77\n19\t54965577\t858158:2\tT\tT[19:54964364[\t20\tPASS\tDISC_MAPQ=20;EVDNC=DSCRD;IMPRECISE;MAPQ=20;MATEID=858158:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=19:54964364(-)-19:54965577(+)__19_54953501_54978501D;SPAN=1213;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:32:20.9:20.9,0,57.2:0:9:-20.71:21.77\n19\t56963539\t859228:1\tG\tG[19:56964242[\t75\tPASS\tEVDNC=ASSMB;HOMSEQ=AG;MAPQ=60;MATEID=859228:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_19_56962501_56987501_14C;SPAN=703;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:25:22:6.9:75.9,6.9,0:25:0:-75.92:75.92\n19\t56964242\t859228:2\tA\t]19:56963539]A\t75\tPASS\tEVDNC=ASSMB;HOMSEQ=AG;MAPQ=60;MATEID=859228:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_19_56962501_56987501_14C;SPAN=703;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:25:22:6.9:75.9,6.9,0:25:0:-75.92:75.92\n19\t57824097\t859732:1\tT\tT]19:58014702]\t33\tPASS\tDISC_MAPQ=57;EVDNC=DSCRD;IMPRECISE;MAPQ=57;MATEID=859732:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=19:57824097(+)-19:58014702(+)__19_57991501_58016501D;SPAN=190605;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:11:6:3:33,3,0:0:11:-33.01:33.01\n19\t58014702\t859732:2\tG\tG]19:57824097]\t33\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=859732:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=19:57824097(+)-19:58014702(+)__19_57991501_58016501D;SPAN=190605;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:11:6:3:33,3,0:0:11:-33.01:33.01\n19\t58106421\t859805:1\tG\tG[19:58106734[\t89\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AAAGAAAAAAAGACATCTG;MAPQ=60;MATEID=859805:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_19_58089501_58114501_22C;SPAN=313;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:29:12:8.1:89.1,8.1,0:17:14:-89.12:89.12\n19\t58106734\t859805:2\tA\t]19:58106421]A\t89\tPASS\tDISC_MAPQ=58;EVDNC=ASDIS;HOMSEQ=AAAGAAAAAAAGACATCTG;MAPQ=60;MATEID=859805:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_19_58089501_58114501_22C;SPAN=313;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:29:12:8.1:89.1,8.1,0:17:14:-89.12:89.12\n20\t1408603\t860540:1\tT\tT[20:1410170[\t42\tPASS\tDISC_MAPQ=59;EVDNC=DSCRD;IMPRECISE;MAPQ=59;MATEID=860540:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=20:1408603(+)-20:1410170(-)__20_1396501_1421501D;SPAN=1567;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:14:4:3.9:42.9,3.9,0:0:14:-42.91:42.91\n20\t1410170\t860540:2\tA\t]20:1408603]A\t42\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=860540:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=20:1408603(+)-20:1410170(-)__20_1396501_1421501D;SPAN=1567;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:14:4:3.9:42.9,3.9,0:0:14:-42.91:42.91\n20\t2379056\t860744:1\tC\t]20:2379968]C\t92\tPASS\tDISC_MAPQ=51;EVDNC=ASDIS;INSERTION=TGAGG;MAPQ=60;MATEID=860744:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_2376501_2401501_11C;SPAN=912;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:29:31:8.4:92.4,8.4,0:22:20:-92.42:92.42\n20\t2379968\t860744:2\tG\tG[20:2379056[\t92\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;INSERTION=TGAGG;MAPQ=60;MATEID=860744:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_2376501_2401501_11C;SPAN=912;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:29:31:8.4:92.4,8.4,0:22:20:-92.42:92.42\n20\t2822516\t860836:1\tT\tT[20:2825764[\t40\tPASS\tEVDNC=ASSMB;HOMSEQ=AAAAGAACTTGATTT;MAPQ=60;MATEID=860836:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_2817501_2842501_19C;SPAN=3248;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:17:55:40.7:40.7,0,96.8:17:0:-40.66:41.96\n20\t2825764\t860836:2\tA\t]20:2822516]A\t40\tPASS\tEVDNC=ASSMB;HOMSEQ=AAAAGAACTTGATTT;MAPQ=60;MATEID=860836:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_2817501_2842501_19C;SPAN=3248;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:17:55:40.7:40.7,0,96.8:17:0:-40.66:41.96\n20\t3751228\t861147:1\tT\t]20:3886453]T\t49\tPASS\tDISC_MAPQ=58;EVDNC=ASDIS;HOMSEQ=TG;MAPQ=60;MATEID=861147:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_3871001_3896001_4C;SPAN=135225;SUBN=3;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:17:7:4.5:49.5,4.5,0:12:12:-49.51:49.51\n20\t3886453\t861147:2\tG\tG[20:3751228[\t49\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TG;MAPQ=60;MATEID=861147:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_3871001_3896001_4C;SPAN=135225;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:17:7:4.5:49.5,4.5,0:12:12:-49.51:49.51\n20\t4446666\t988141:1\tG\t]Un_KN707691v1_decoy:4885]G\t52\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=988141:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_542_1_4885_3C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:18:4:4.8:52.8,4.8,0:18:0:-52.81:52.81\n20\t4988872\t861527:1\tT\t]20:5120848]T\t20\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=861527:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_5120501_5145501_29C;SPAN=131976;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:7:11:6.8:20,0,6.8:7:0:-20.32:20.32\n20\t5120848\t861527:2\tC\tC[20:4988872[\t20\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=861527:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_5120501_5145501_29C;SPAN=131976;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:7:11:6.8:20,0,6.8:7:0:-20.32:20.32\n20\t5648405\t861660:1\tG\tG[20:5649718[\t33\tPASS\tEVDNC=ASSMB;HOMSEQ=CTGTAATCCCAGCACTTTGGGAGGCCGAGG;MAPQ=60;MATEID=861660:2;MATENM=3;NM=2;NUMPARTS=2;SCTG=c_20_5635001_5660001_0C;SPAN=1313;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:11:4:3:33,3,0:11:0:-33.01:33.01\n20\t5649718\t861660:2\tC\t]20:5648405]C\t33\tPASS\tEVDNC=ASSMB;HOMSEQ=CTGTAATCCCAGCACTTTGGGAGGCCGAGG;MAPQ=60;MATEID=861660:1;MATENM=2;NM=3;NUMPARTS=2;SCTG=c_20_5635001_5660001_0C;SPAN=1313;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:11:4:3:33,3,0:11:0:-33.01:33.01\n20\t6368548\t861822:2\tT\tT]14:45854840]\t27\tPASS\tDISC_MAPQ=53;EVDNC=DSCRD;IMPRECISE;MAPQ=53;MATEID=861822:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=14:45854840(+)-20:6368548(+)__20_6345501_6370501D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:19:17.9:27.8,0,17.9:0:10:-27.73:27.73\n20\t6681439\t861891:2\tA\t]1:167120498]A\t62\tPASS\tEVDNC=ASSMB;HOMSEQ=A;MAPQ=60;MATEID=861891:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_6664001_6689001_24C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:21:17:5.7:62.7,5.7,0:21:0:-62.72:62.72\n20\t7116263\t862037:1\tT\tT[20:7122199[\t52\tPASS\tDISC_MAPQ=56;EVDNC=DSCRD;IMPRECISE;MAPQ=56;MATEID=862037:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=20:7116263(+)-20:7122199(-)__20_7105001_7130001D;SPAN=5936;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:18:17:4.8:52.8,4.8,0:0:18:-52.81:52.81\n20\t7122199\t862037:2\tC\t]20:7116263]C\t52\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=862037:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=20:7116263(+)-20:7122199(-)__20_7105001_7130001D;SPAN=5936;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:18:17:4.8:52.8,4.8,0:0:18:-52.81:52.81\n20\t7293703\t862103:1\tT\tT[20:7294003[\t99\tPASS\tEVDNC=ASSMB;HOMSEQ=GACAATACATTTTT;MAPQ=60;MATEID=862103:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_20_7276501_7301501_131C;SPAN=300;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:34:24:9.3:102.3,9.3,0:34:0:-102.3:102.3\n20\t7294003\t862103:2\tG\t]20:7293703]G\t99\tPASS\tEVDNC=ASSMB;HOMSEQ=GACAATACATTTTT;MAPQ=60;MATEID=862103:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_20_7276501_7301501_131C;SPAN=300;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:34:24:9.3:102.3,9.3,0:34:0:-102.3:102.3\n20\t7850360\t862267:1\tT\t]20:7932110]T\t15\tPASS\tDISC_MAPQ=56;EVDNC=ASDIS;INSERTION=T;MAPQ=40;MATEID=862267:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_20_7913501_7938501_79C;SPAN=81750;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:6:15:15.5:15.5,0,22.1:3:6:-15.59:15.65\n20\t7932110\t862267:2\tT\tT[20:7850360[\t15\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;INSERTION=T;MAPQ=60;MATEID=862267:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_20_7913501_7938501_79C;SPAN=81750;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:6:15:15.5:15.5,0,22.1:3:6:-15.59:15.65\n20\t8006283\t866149:1\tA\tA[20:21398815[\t21\tPASS\tEVDNC=ASSMB;INSERTION=TAT;MAPQ=60;MATEID=866149:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_21388501_21413501_37C;SPAN=13392532;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:19:21.2:21.2,0,24.5:8:0:-21.07:21.11\n20\t10323922\t862941:1\tC\t]20:10324068]C\t41\tPASS\tEVDNC=ASSMB;HOMSEQ=CCT;MAPQ=60;MATEID=862941:2;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_20_10314501_10339501_15C;SPAN=146;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:16:41:41.3:41.3,0,61.1:16:0:-41.29:41.52\n20\t10324068\t862941:2\tT\tT[20:10323922[\t41\tPASS\tEVDNC=ASSMB;HOMSEQ=CCT;MAPQ=60;MATEID=862941:1;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_20_10314501_10339501_15C;SPAN=146;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:16:41:41.3:41.3,0,61.1:16:0:-41.29:41.52\n20\t11666903\t863362:1\tG\tG[20:11668022[\t62\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=863362:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=20:11666903(+)-20:11668022(-)__20_11662001_11687001D;SPAN=1119;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:21:8:5.7:62.7,5.7,0:0:21:-62.72:62.72\n20\t11668022\t863362:2\tA\t]20:11666903]A\t62\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=863362:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=20:11666903(+)-20:11668022(-)__20_11662001_11687001D;SPAN=1119;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:21:8:5.7:62.7,5.7,0:0:21:-62.72:62.72\n20\t14133206\t864184:1\tT\tT[20:14728329[\t46\tPASS\tEVDNC=ASSMB;INSERTION=A;MAPQ=60;MATEID=864184:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_14724501_14749501_0C;SPAN=595123;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:16:10:4.2:46.2,4.2,0:16:0:-46.21:46.21\n20\t14164805\t864303:1\tT\tT[20:15244618[\t36\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=864303:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_15239001_15264001_63C;SPAN=1079813;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:12:8:3.3:36.3,3.3,0:12:0:-36.31:36.31\n20\t14728329\t864184:2\tC\t]20:14133206]C\t46\tPASS\tEVDNC=ASSMB;INSERTION=A;MAPQ=60;MATEID=864184:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_14724501_14749501_0C;SPAN=595123;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:16:10:4.2:46.2,4.2,0:16:0:-46.21:46.21\n20\t14940342\t864232:1\tA\tA[20:14972845[\t26\tPASS\tDISC_MAPQ=53;EVDNC=DSCRD;IMPRECISE;MAPQ=53;MATEID=864232:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=20:14940342(+)-20:14972845(-)__20_14969501_14994501D;SPAN=32503;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:11:0.2:26.6,0,0.2:0:9:-28.04:28.04\n20\t14972845\t864232:2\tA\t]20:14940342]A\t26\tPASS\tDISC_MAPQ=51;EVDNC=DSCRD;IMPRECISE;MAPQ=51;MATEID=864232:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=20:14940342(+)-20:14972845(-)__20_14969501_14994501D;SPAN=32503;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:11:0.2:26.6,0,0.2:0:9:-28.04:28.04\n20\t15095882\t864265:2\tT\tT[9:122576590[\t29\tPASS\tEVDNC=ASSMB;INSERTION=T;MAPQ=60;MATEID=864265:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_15092001_15117001_11C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:10:7:2.7:29.7,2.7,0:10:0:-29.71:29.71\n20\t15244618\t864303:2\tG\t]20:14164805]G\t36\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=864303:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_15239001_15264001_63C;SPAN=1079813;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:12:8:3.3:36.3,3.3,0:12:0:-36.31:36.31\n20\t15405783\t864334:2\tA\t]9:122577102]A\t39\tPASS\tEVDNC=ASSMB;HOMSEQ=AA;MAPQ=60;MATEID=864334:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_15386001_15411001_1C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:13:12:3.6:39.6,3.6,0:13:0:-39.61:39.61\n20\t15902057\t864505:1\tT\tT[20:15962741[\t42\tPASS\tEVDNC=ASSMB;HOMSEQ=TT;MAPQ=60;MATEID=864505:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_15949501_15974501_3C;SPAN=60684;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:13:14:3.9:42.9,3.9,0:13:0:-42.71:42.71\n20\t15962741\t864505:2\tT\t]20:15902057]T\t42\tPASS\tEVDNC=ASSMB;HOMSEQ=TT;MAPQ=60;MATEID=864505:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_15949501_15974501_3C;SPAN=60684;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:13:14:3.9:42.9,3.9,0:13:0:-42.71:42.71\n20\t16188295\t864602:1\tT\t]20:16188860]T\t24\tPASS\tDISC_MAPQ=52;EVDNC=DSCRD;IMPRECISE;MAPQ=52;MATEID=864602:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=20:16188295(-)-20:16188860(+)__20_16170001_16195001D;SPAN=565;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:31:24.5:24.5,0,50.9:0:10:-24.3:24.91\n20\t16188860\t864602:2\tT\tT[20:16188295[\t24\tPASS\tDISC_MAPQ=56;EVDNC=DSCRD;IMPRECISE;MAPQ=56;MATEID=864602:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=20:16188295(-)-20:16188860(+)__20_16170001_16195001D;SPAN=565;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:31:24.5:24.5,0,50.9:0:10:-24.3:24.91\n20\t18047369\t865156:1\tC\tC[20:18047636[\t46\tPASS\tDISC_MAPQ=58;EVDNC=ASDIS;HOMSEQ=CTGAGGTCAGGAGTTCGAGACCAGCCTGACCAATATGATGAAACCCCGTCTCTACTAAAAATACAAAAATTAGCC;MAPQ=60;MATEID=865156:2;MATENM=4;NM=0;NUMPARTS=2;SCTG=c_20_18032001_18057001_119C;SPAN=267;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:14:15:4.2:46.2,4.2,0:8:6:-46.19:46.19\n20\t18047636\t865156:2\tC\t]20:18047369]C\t46\tPASS\tDISC_MAPQ=49;EVDNC=ASDIS;HOMSEQ=CTGAGGTCAGGAGTTCGAGACCAGCCTGACCAATATGATGAAACCCCGTCTCTACTAAAAATACAAAAATTAGCC;MAPQ=60;MATEID=865156:1;MATENM=0;NM=4;NUMPARTS=2;SCTG=c_20_18032001_18057001_119C;SPAN=267;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:14:15:4.2:46.2,4.2,0:8:6:-46.19:46.19\n20\t18261083\t865228:1\tA\t]20:18262525]A\t43\tPASS\tEVDNC=ASSMB;INSERTION=CA;MAPQ=60;MATEID=865228:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_18252501_18277501_108C;SPAN=1442;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:15:21:7.4:43.7,0,7.4:15:0:-44.87:44.87\n20\t18262525\t865228:2\tA\tA[20:18261083[\t43\tPASS\tEVDNC=ASSMB;INSERTION=CA;MAPQ=60;MATEID=865228:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_18252501_18277501_108C;SPAN=1442;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:15:21:7.4:43.7,0,7.4:15:0:-44.87:44.87\n20\t21065659\t866065:2\tA\t[1:53953907[A\t32\tPASS\tDISC_MAPQ=35;EVDNC=ASDIS;HOMSEQ=CT;MAPQ=60;MATEID=866065:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_21045501_21070501_8C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:14:2.6:32.3,0,2.6:9:4:-33.83:33.83\n20\t21305489\t866118:1\tA\tA[20:21308135[\t99\tPASS\tDISC_MAPQ=59;EVDNC=ASDIS;HOMSEQ=CCATGTTGGCCAGGCTGGTCTCGAACTCCTGACCTCA;MAPQ=60;MATEID=866118:2;MATENM=11;NM=2;NUMPARTS=2;SCTG=c_20_21290501_21315501_3C;SPAN=2646;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:33:8:9:99,9,0:20:20:-99.02:99.02\n20\t21308135\t866118:2\tC\t]20:21305489]C\t99\tPASS\tDISC_MAPQ=59;EVDNC=ASDIS;HOMSEQ=CCATGTTGGCCAGGCTGGTCTCGAACTCCTGACCTCA;MAPQ=60;MATEID=866118:1;MATENM=2;NM=11;NUMPARTS=2;SCTG=c_20_21290501_21315501_3C;SPAN=2646;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:33:8:9:99,9,0:20:20:-99.02:99.02\n20\t21398815\t866149:2\tT\t]20:8006283]T\t21\tPASS\tEVDNC=ASSMB;INSERTION=TAT;MAPQ=60;MATEID=866149:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_21388501_21413501_37C;SPAN=13392532;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:19:21.2:21.2,0,24.5:8:0:-21.07:21.11\n20\t21799466\t866215:1\tG\tG[20:21799844[\t46\tPASS\tEVDNC=ASSMB;INSERTION=CAACGTGACTTTGACT;MAPQ=60;MATEID=866215:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_21780501_21805501_7C;SPAN=378;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:17:35:39.8:46.4,0,39.8:17:0:-46.29:46.29\n20\t21799844\t866215:2\tA\t]20:21799466]A\t46\tPASS\tEVDNC=ASSMB;INSERTION=CAACGTGACTTTGACT;MAPQ=60;MATEID=866215:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_21780501_21805501_7C;SPAN=378;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:17:35:39.8:46.4,0,39.8:17:0:-46.29:46.29\n20\t21869265\t866227:1\tT\tT[20:21869552[\t44\tPASS\tEVDNC=ASSMB;HOMSEQ=T;MAPQ=60;MATEID=866227:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_20_21854001_21879001_35C;SPAN=287;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:16:30:31.1:44.3,0,31.1:16:0:-44.51:44.51\n20\t21869552\t866227:2\tT\t]20:21869265]T\t44\tPASS\tEVDNC=ASSMB;HOMSEQ=T;MAPQ=60;MATEID=866227:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_20_21854001_21879001_35C;SPAN=287;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:16:30:31.1:44.3,0,31.1:16:0:-44.51:44.51\n20\t23122556\t866580:1\tC\tC[20:23122996[\t20\tPASS\tEVDNC=ASSMB;HOMSEQ=C;MAPQ=60;MATEID=866580:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_23103501_23128501_77C;SPAN=440;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:35:20:20,0,66.2:9:0:-19.87:21.36\n20\t23122559\t866581:1\tG\t[20:23122996[G\t10\tPASS\tDISC_MAPQ=60;EVDNC=TSI_L;HOMSEQ=GG;MAPQ=60;MATEID=866581:2;MATENM=0;NM=0;NUMPARTS=3;REPSEQ=ATAT;SCTG=c_20_23103501_23128501_37C;SPAN=437;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:6:35:10.1:10.1,0,76.1:5:4:-9.968:13.04\n20\t23122996\t866580:2\tC\t]20:23122556]C\t20\tPASS\tEVDNC=ASSMB;HOMSEQ=C;MAPQ=60;MATEID=866580:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_23103501_23128501_77C;SPAN=440;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:35:20:20,0,66.2:9:0:-19.87:21.36\n20\t23122996\t866581:2\tC\t[20:23122559[C\t10\tPASS\tDISC_MAPQ=255;EVDNC=TSI_L;HOMSEQ=GG;MAPQ=60;MATEID=866581:1;MATENM=0;NM=0;NUMPARTS=3;REPSEQ=ATAT;SCTG=c_20_23103501_23128501_37C;SPAN=437;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:6:35:10.1:10.1,0,76.1:5:4:-9.968:13.04\n20\t23520466\t866673:1\tG\t]20:23608865]G\t34\tPASS\tDISC_MAPQ=59;EVDNC=ASDIS;HOMSEQ=GGGGC;MAPQ=60;MATEID=866673:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_23495501_23520501_81C;SPAN=88399;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:20:14.3:34.1,0,14.3:7:9:-34.32:34.32\n20\t23608865\t866673:2\tC\tC[20:23520466[\t34\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=GGGGC;MAPQ=60;MATEID=866673:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_23495501_23520501_81C;SPAN=88399;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:20:14.3:34.1,0,14.3:7:9:-34.32:34.32\n20\t23664456\t866799:1\tA\t]20:23795323]A\t39\tPASS\tDISC_MAPQ=59;EVDNC=DSCRD;IMPRECISE;MAPQ=59;MATEID=866799:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=20:23664456(-)-20:23795323(+)__20_23789501_23814501D;SPAN=130867;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:13:11:3.6:39.6,3.6,0:0:13:-39.61:39.61\n20\t23702739\t866762:1\tA\t]20:23765575]A\t46\tPASS\tDISC_MAPQ=25;EVDNC=DSCRD;IMPRECISE;MAPQ=25;MATEID=866762:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=20:23702739(-)-20:23765575(+)__20_23740501_23765501D;SPAN=62836;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:15:12:4.2:46.2,4.2,0:0:15:-46.21:46.21\n20\t23765575\t866762:2\tA\tA[20:23702739[\t46\tPASS\tDISC_MAPQ=57;EVDNC=DSCRD;IMPRECISE;MAPQ=57;MATEID=866762:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=20:23702739(-)-20:23765575(+)__20_23740501_23765501D;SPAN=62836;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:15:12:4.2:46.2,4.2,0:0:15:-46.21:46.21\n20\t23795323\t866799:2\tT\tT[20:23664456[\t39\tPASS\tDISC_MAPQ=51;EVDNC=DSCRD;IMPRECISE;MAPQ=51;MATEID=866799:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=20:23664456(-)-20:23795323(+)__20_23789501_23814501D;SPAN=130867;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:13:11:3.6:39.6,3.6,0:0:13:-39.61:39.61\n20\t24288974\t866997:1\tC\tC[20:24289194[\t41\tPASS\tEVDNC=ASSMB;HOMSEQ=TATCCTGTATTTTC;MAPQ=60;MATEID=866997:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_24279501_24304501_80C;SPAN=220;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:18:1.7:41.3,0,1.7:14:0:-42.92:42.92\n20\t24289194\t866997:2\tT\t]20:24288974]T\t41\tPASS\tEVDNC=ASSMB;HOMSEQ=TATCCTGTATTTTC;MAPQ=60;MATEID=866997:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_24279501_24304501_80C;SPAN=220;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:18:1.7:41.3,0,1.7:14:0:-42.92:42.92\n20\t24682044\t867104:1\tG\t]20:24682157]G\t99\tPASS\tEVDNC=ASSMB;INSERTION=GC;MAPQ=30;MATEID=867104:2;MATENM=4;NM=3;NUMPARTS=2;SCTG=c_20_24671501_24696501_54C;SPAN=113;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:37:76:87.8:101,0,87.8:37:0:-100.8:100.8\n20\t24682157\t867104:2\tT\tT[20:24682044[\t99\tPASS\tEVDNC=ASSMB;INSERTION=GC;MAPQ=60;MATEID=867104:1;MATENM=3;NM=4;NUMPARTS=2;SCTG=c_20_24671501_24696501_54C;SPAN=113;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:37:76:87.8:101,0,87.8:37:0:-100.8:100.8\n20\t24923063\t867146:1\tC\tC[20:24923780[\t66\tPASS\tEVDNC=ASSMB;HOMSEQ=GC;MAPQ=60;MATEID=867146:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_20_24916501_24941501_23C;SPAN=717;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:20:22:6:66,6,0:20:0:-64.93:64.93\n20\t24923780\t867146:2\tG\t]20:24923063]G\t66\tPASS\tEVDNC=ASSMB;HOMSEQ=GC;MAPQ=60;MATEID=867146:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_20_24916501_24941501_23C;SPAN=717;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:20:22:6:66,6,0:20:0:-64.93:64.93\n20\t26280028\t867748:1\tA\tA[20:26281095[\t75\tPASS\tDISC_MAPQ=51;EVDNC=DSCRD;IMPRECISE;MAPQ=51;MATEID=867748:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=20:26280028(+)-20:26281095(-)__20_26264001_26289001D;SPAN=1067;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:25:3:6.9:75.9,6.9,0:0:25:-75.92:75.92\n20\t26281095\t867748:2\tT\t]20:26280028]T\t75\tPASS\tDISC_MAPQ=59;EVDNC=DSCRD;IMPRECISE;MAPQ=59;MATEID=867748:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=20:26280028(+)-20:26281095(-)__20_26264001_26289001D;SPAN=1067;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:25:3:6.9:75.9,6.9,0:0:25:-75.92:75.92\n20\t26317015\t867834:1\tT\tT[20:26322075[\t99\tPASS\tDISC_MAPQ=55;EVDNC=ASDIS;HOMSEQ=GAGCAGTTTTGAAACACTCTTTTTGTTGGATCTGCAAGTCGACATTTGGAGCGCTTTGAGGCCT;MAPQ=60;MATEID=867834:2;MATENM=8;NM=8;NUMPARTS=2;SCTG=c_20_26313001_26338001_73C;SPAN=5060;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:53:13:14.7:161.7,14.7,0:25:36:-161.7:161.7\n20\t26322075\t867834:2\tG\t]20:26317015]G\t99\tPASS\tDISC_MAPQ=58;EVDNC=ASDIS;HOMSEQ=GAGCAGTTTTGAAACACTCTTTTTGTTGGATCTGCAAGTCGACATTTGGAGCGCTTTGAGGCCT;MAPQ=60;MATEID=867834:1;MATENM=8;NM=8;NUMPARTS=2;SCTG=c_20_26313001_26338001_73C;SPAN=5060;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:53:13:14.7:161.7,14.7,0:25:36:-161.7:161.7\n20\t26364309\t867910:1\tN\tN[20:26366032[\t38\tPASS\tDISC_MAPQ=52;EVDNC=DSCRD;IMPRECISE;MAPQ=52;MATEID=867910:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=20:26364309(+)-20:26366032(-)__20_26362001_26387001D;SPAN=1723;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:26:25.7:38.9,0,25.7:0:14:-39.03:39.03\n20\t26366032\t867910:2\tT\t]20:26364309]T\t38\tPASS\tDISC_MAPQ=20;EVDNC=DSCRD;IMPRECISE;MAPQ=20;MATEID=867910:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=20:26364309(+)-20:26366032(-)__20_26362001_26387001D;SPAN=1723;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:26:25.7:38.9,0,25.7:0:14:-39.03:39.03\n20\t26366434\t867920:1\tA\tA[20:26368768[\t99\tPASS\tDISC_MAPQ=9;EVDNC=TSI_G;HOMSEQ=CATTCTCAGAAACTTATTTCTGATGCGTGTACTCAACTAACAGAGTTGAACCTTTGTTTTGTCAGAGAAGATTTCAAACTCTCTTTTTGTGGAATCTGCAAGTGGATATTTGGCTAGGTGTGTGGATTTCGCTGGAAACGGGAATACATAGAAAAAGCAGACAGCAGCGTTCTGAGAAACTACTTTGTGATGTTTGCATTGAAGTCACAGAGCTGAACACTCCCTTTCATAGATCAGGTTTGAAACACTCCTTTTGTAGTATCTGGAAATGGACATTTGGAGCGCTTTCAGGCCTATGGTGAAAAAGGAAATATCTTCCTATAAAAACTAGACAGAAGCATTCTCTGAAACTAGTTTATGATGCATCTACTCAACTAACAGAGTTGAACATTTCTTTTGATAGAGCAGTTTTGAAACACACTTTTTGTGGAATCTCCAAGTGGA;INSERTION=GTTGAACGTTTGTTTTGACAGAGCAGTTTTGAAACACTCTTTTTGTGGAATCTGCAAGTGGATGTTCGGTTAGCTTTGCGGATTTCGTTGGAAACGGGAATACGTATAAAAAGCAGACAGCAGCGTTCTGAGAAACTTCATTGTGATGTTTGCATTCAAGTCACGGAGTTGAACATTCCCTTTCATAGAGCAGGTTTGAAACACTCTTTTTGTCATATCTGGAAGTGTCCATTTGGAGCGCGTTCAAGCTTGTGTTGAAAAAAGAAATATCTTCCCTTAAAAATTAGACAGTAG;MAPQ=48;MATEID=867920:2;MATENM=23;NM=5;NUMPARTS=3;SCTG=c_20_26362001_26387001_43C;SECONDARY;SPAN=2334;SUBN=5;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:55:67:4.4:162.8,0,4.4:54:3:-171.5:171.5\n20\t26368768\t867920:2\tC\t]20:26366434]C\t99\tPASS\tDISC_MAPQ=2;EVDNC=TSI_G;HOMSEQ=CATTCTCAGAAACTTATTTCTGATGCGTGTACTCAACTAACAGAGTTGAACCTTTGTTTTGTCAGAGAAGATTTCAAACTCTCTTTTTGTGGAATCTGCAAGTGGATATTTGGCTAGGTGTGTGGATTTCGCTGGAAACGGGAATACATAGAAAAAGCAGACAGCAGCGTTCTGAGAAACTACTTTGTGATGTTTGCATTGAAGTCACAGAGCTGAACACTCCCTTTCATAGATCAGGTTTGAAACACTCCTTTTGTAGTATCTGGAAATGGACATTTGGAGCGCTTTCAGGCCTATGGTGAAAAAGGAAATATCTTCCTATAAAAACTAGACAGAAGCATTCTCTGAAACTAGTTTATGATGCATCTACTCAACTAACAGAGTTGAACATTTCTTTTGATAGAGCAGTTTTGAAACACACTTTTTGTGGAATCTCCAAGTGGA;INSERTION=GTTGAACGTTTGTTTTGACAGAGCAGTTTTGAAACACTCTTTTTGTGGAATCTGCAAGTGGATGTTCGGTTAGCTTTGCGGATTTCGTTGGAAACGGGAATACGTATAAAAAGCAGACAGCAGCGTTCTGAGAAACTTCATTGTGATGTTTGCATTCAAGTCACGGAGTTGAACATTCCCTTTCATAGAGCAGGTTTGAAACACTCTTTTTGTCATATCTGGAAGTGTCCATTTGGAGCGCGTTCAAGCTTGTGTTGAAAAAAGAAATATCTTCCCTTAAAAATTAGACAGTAG;MAPQ=48;MATEID=867920:1;MATENM=5;NM=23;NUMPARTS=3;SCTG=c_20_26362001_26387001_43C;SECONDARY;SPAN=2334;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:55:67:4.4:162.8,0,4.4:54:3:-171.5:171.5\n20\t26486446\t868032:1\tA\tA[20:26599740[\t32\tPASS\tDISC_MAPQ=29;EVDNC=DSCRD;IMPRECISE;MAPQ=29;MATEID=868032:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=20:26486446(+)-20:26599740(-)__20_26484501_26509501D;SPAN=113294;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:16:72:32.6:32.6,0,148.1:0:16:-32.58:36.8\n20\t26517768\t868080:1\tA\tA[20:26596367[\t42\tPASS\tDISC_MAPQ=33;EVDNC=DSCRD;IMPRECISE;MAPQ=33;MATEID=868080:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=20:26517768(+)-20:26596367(-)__20_26509001_26534001D;SPAN=78599;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:14:12:3.9:42.9,3.9,0:0:14:-42.91:42.91\n20\t26545266\t868137:1\tT\tT[20:26556859[\t39\tPASS\tDISC_MAPQ=30;EVDNC=DSCRD;IMPRECISE;MAPQ=30;MATEID=868137:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=20:26545266(+)-20:26556859(-)__20_26533501_26558501D;SPAN=11593;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:12:13:3.6:39.6,3.6,0:0:12:-39.28:39.28\n20\t26556859\t868137:2\tC\t]20:26545266]C\t39\tPASS\tDISC_MAPQ=33;EVDNC=DSCRD;IMPRECISE;MAPQ=33;MATEID=868137:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=20:26545266(+)-20:26556859(-)__20_26533501_26558501D;SPAN=11593;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:12:13:3.6:39.6,3.6,0:0:12:-39.28:39.28\n20\t26596367\t868080:2\tA\t]20:26517768]A\t42\tPASS\tDISC_MAPQ=27;EVDNC=DSCRD;IMPRECISE;MAPQ=27;MATEID=868080:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=20:26517768(+)-20:26596367(-)__20_26509001_26534001D;SPAN=78599;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:14:12:3.9:42.9,3.9,0:0:14:-42.91:42.91\n20\t26599740\t868032:2\tT\t]20:26486446]T\t32\tPASS\tDISC_MAPQ=26;EVDNC=DSCRD;IMPRECISE;MAPQ=26;MATEID=868032:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=20:26486446(+)-20:26599740(-)__20_26484501_26509501D;SPAN=113294;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:16:72:32.6:32.6,0,148.1:0:16:-32.58:36.8\n20\t26608405\t868274:1\tC\tC[20:26631417[\t99\tPASS\tDISC_MAPQ=49;EVDNC=DSCRD;IMPRECISE;MAPQ=49;MATEID=868274:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=20:26608405(+)-20:26631417(-)__20_26607001_26632001D;SPAN=23012;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:39:17:10.8:118.8,10.8,0:0:39:-118.8:118.8\n20\t26615180\t868475:1\tG\tG[20:27261198[\t46\tPASS\tDISC_MAPQ=18;EVDNC=DSCRD;IMPRECISE;MAPQ=18;MATEID=868475:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=20:26615180(+)-20:27261198(-)__20_27244001_27269001D;SPAN=646018;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:15:9:4.2:46.2,4.2,0:0:15:-46.21:46.21\n20\t26631417\t868274:2\tG\t]20:26608405]G\t99\tPASS\tDISC_MAPQ=55;EVDNC=DSCRD;IMPRECISE;MAPQ=55;MATEID=868274:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=20:26608405(+)-20:26631417(-)__20_26607001_26632001D;SPAN=23012;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:39:17:10.8:118.8,10.8,0:0:39:-118.8:118.8\n20\t26631898\t868385:1\tC\tC[20:26634139[\t21\tPASS\tDISC_MAPQ=38;EVDNC=DSCRD;IMPRECISE;MAPQ=38;MATEID=868385:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=20:26631898(+)-20:26634139(-)__20_26631501_26656501D;SPAN=2241;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:19:21.2:21.2,0,24.5:0:8:-21.07:21.11\n20\t26634139\t868385:2\tA\t]20:26631898]A\t21\tPASS\tDISC_MAPQ=23;EVDNC=DSCRD;IMPRECISE;MAPQ=23;MATEID=868385:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=20:26631898(+)-20:26634139(-)__20_26631501_26656501D;SPAN=2241;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:19:21.2:21.2,0,24.5:0:8:-21.07:21.11\n20\t26634424\t868389:1\tA\tA]20:26634787]\t23\tPASS\tDISC_MAPQ=20;EVDNC=DSCRD;IMPRECISE;MAPQ=20;MATEID=868389:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=20:26634424(+)-20:26634787(+)__20_26631501_26656501D;SPAN=363;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:47:23.3:23.3,0,92.6:0:11:-23.1:25.58\n20\t26634787\t868389:2\tC\tC]20:26634424]\t23\tPASS\tDISC_MAPQ=59;EVDNC=DSCRD;IMPRECISE;MAPQ=59;MATEID=868389:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=20:26634424(+)-20:26634787(+)__20_26631501_26656501D;SPAN=363;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:47:23.3:23.3,0,92.6:0:11:-23.1:25.58\n20\t27261198\t868475:2\tG\t]20:26615180]G\t46\tPASS\tDISC_MAPQ=30;EVDNC=DSCRD;IMPRECISE;MAPQ=30;MATEID=868475:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=20:26615180(+)-20:27261198(-)__20_27244001_27269001D;SPAN=646018;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:15:9:4.2:46.2,4.2,0:0:15:-46.21:46.21\n20\t27295507\t99662:2\tG\tG[2:94189122[\t50\tPASS\tDISC_MAPQ=19;EVDNC=DSCRD;IMPRECISE;MAPQ=19;MATEID=99662:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=2:94189122(-)-20:27295507(+)__2_94178001_94203001D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:18:30:24.5:50.9,0,24.5:0:18:-51.49:51.49\n20\t28728974\t892538:1\tN\t]21:7957991]N\t26\tPASS\tDISC_MAPQ=40;EVDNC=DSCRD;IMPRECISE;MAPQ=40;MATEID=892538:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=20:28728974(-)-21:7957991(+)__21_7938001_7963001D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:15:81:26.9:26.9,0,175.4:0:15:-26.75:33.16\n20\t28754934\t869379:1\tA\tA[20:28757852[\t99\tPASS\tDISC_MAPQ=44;EVDNC=ASDIS;HOMSEQ=ATATCCCTTTGCAGACTCTA;MAPQ=60;MATEID=869379:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_20_28738501_28763501_506C;SPAN=2918;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:42:19:11.7:128.7,11.7,0:41:4:-128.7:128.7\n20\t28757851\t896709:1\tN\t[21:10798083[N\t0\tPASS\tDISC_MAPQ=39;EVDNC=DSCRD;IMPRECISE;MAPQ=39;MATEID=896709:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=20:28757851(-)-21:10798083(-)__21_10780001_10805001D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/0:8:151:16:0,16,412.6:0:8:16.04:13.09\n20\t28757852\t869379:2\tA\t]20:28754934]A\t99\tPASS\tDISC_MAPQ=17;EVDNC=ASDIS;HOMSEQ=ATATCCCTTTGCAGACTCTA;MAPQ=60;MATEID=869379:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_20_28738501_28763501_506C;SPAN=2918;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:42:19:11.7:128.7,11.7,0:41:4:-128.7:128.7\n20\t28769332\t869502:1\tT\t]20:28771426]T\t60\tPASS\tDISC_MAPQ=54;EVDNC=ASDIS;HOMSEQ=TGCACACATCACAAAGAAGTTTCTCAGAATGCTTCTCTCTAGTTTTTATGTGA;MAPQ=60;MATEID=869502:2;MATENM=0;NM=3;NUMPARTS=2;SCTG=c_20_28763001_28788001_145C;SPAN=2094;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:23:55:60.5:60.5,0,77:11:14:-60.46:60.59\n20\t28771426\t869502:2\tA\tA[20:28769332[\t60\tPASS\tDISC_MAPQ=54;EVDNC=ASDIS;HOMSEQ=TGCACACATCACAAAGAAGTTTCTCAGAATGCTTCTCTCTAGTTTTTATGTGA;MAPQ=60;MATEID=869502:1;MATENM=3;NM=0;NUMPARTS=2;SCTG=c_20_28763001_28788001_145C;SPAN=2094;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:23:55:60.5:60.5,0,77:11:14:-60.46:60.59\n20\t28781252\t658453:2\tT\t[13:16259044[T\t92\tPASS\tDISC_MAPQ=255;EVDNC=ASDIS;HOMSEQ=TCAGAATGCTTCTGTGTAGTTTTTTTGTGAAGATATTT;MAPQ=60;MATEID=658453:1;MATENM=7;NM=1;NUMPARTS=2;SCTG=c_13_16243501_16268501_360C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:30:10:8.4:92.4,8.4,0:21:9:-92.42:92.42\n20\t28815225\t869856:1\tC\tC[20:28824450[\t0\tPASS\tDISC_MAPQ=49;EVDNC=ASDIS;HOMSEQ=TATGTGAAGATATTTCC;MAPQ=60;MATEID=869856:2;MATENM=5;NM=4;NUMPARTS=2;SCTG=c_20_28812001_28837001_258C;SPAN=9225;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/0:16:243:15.1:0,15.1,640.3:10:9:15.49:27.73\n20\t28815434\t869859:1\tA\t]20:28824721]A\t9\tPASS\tDISC_MAPQ=29;EVDNC=ASDIS;HOMSEQ=ACTTGCAGATTCTACAAAAAGAGAGTTTCAAAACTGCTCAATCAAAAG;MAPQ=60;MATEID=869859:2;MATENM=2;NM=2;NUMPARTS=2;SCTG=c_20_28812001_28837001_824C;SPAN=9287;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:26:271:9.7:9.7,0,673.1:22:4:-9.65:49.49\n20\t28824450\t869856:2\tT\t]20:28815225]T\t0\tPASS\tDISC_MAPQ=59;EVDNC=ASDIS;HOMSEQ=TATGTGAAGATATTTCC;MAPQ=60;MATEID=869856:1;MATENM=4;NM=5;NUMPARTS=2;SCTG=c_20_28812001_28837001_258C;SPAN=9225;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/0:16:243:15.1:0,15.1,640.3:10:9:15.49:27.73\n20\t28824721\t869859:2\tG\tG[20:28815434[\t9\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=ACTTGCAGATTCTACAAAAAGAGAGTTTCAAAACTGCTCAATCAAAAG;MAPQ=60;MATEID=869859:1;MATENM=2;NM=2;NUMPARTS=2;SCTG=c_20_28812001_28837001_824C;SPAN=9287;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:26:271:9.7:9.7,0,673.1:22:4:-9.65:49.49\n20\t28835228\t869771:2\tT\tT[10:39496326[\t22\tPASS\tDISC_MAPQ=24;EVDNC=DSCRD;IMPRECISE;MAPQ=24;MATEID=869771:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=10:39496326(-)-20:28835228(+)__20_28812001_28837001D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:50:22.4:22.4,0,101.6:0:11:-22.26:25.25\n20\t28840026\t870053:1\tT\tT[20:28841515[\t0\tPASS\tDISC_MAPQ=46;EVDNC=DSCRD;IMPRECISE;MAPQ=46;MATEID=870053:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=20:28840026(+)-20:28841515(-)__20_28836501_28861501D;SPAN=1489;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/0:11:160:8.5:0,8.5,419.2:0:11:8.664:19.28\n20\t28840894\t870075:1\tG\t]20:29152583]G\t47\tPASS\tDISC_MAPQ=12;EVDNC=ASDIS;HOMSEQ=GTGGAGAAGGAAATATCTTCACATAAAAACTATGCAGAAGCATTCTGAGAAAC;MAPQ=44;MATEID=870075:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_20_28836501_28861501_26C;SPAN=311689;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:18:44:47:47,0,63.5:13:5:-47.05:47.19\n20\t28841515\t870053:2\tG\t]20:28840026]G\t0\tPASS\tDISC_MAPQ=20;EVDNC=DSCRD;IMPRECISE;MAPQ=20;MATEID=870053:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=20:28840026(+)-20:28841515(-)__20_28836501_28861501D;SPAN=1489;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/0:11:160:8.5:0,8.5,419.2:0:11:8.664:19.28\n20\t28859998\t870106:1\tT\t]20:28860195]T\t66\tPASS\tEVDNC=ASSMB;HOMSEQ=TCACACATCACAAAGAAGTTTCTCAGA;MAPQ=60;MATEID=870106:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_28836501_28861501_116C;SPAN=197;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:24:46:46.7:66.5,0,46.7:24:0:-66.42:66.42\n20\t28860195\t870106:2\tA\tA[20:28859998[\t66\tPASS\tEVDNC=ASSMB;HOMSEQ=TCACACATCACAAAGAAGTTTCTCAGA;MAPQ=60;MATEID=870106:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_28836501_28861501_116C;SPAN=197;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:24:46:46.7:66.5,0,46.7:24:0:-66.42:66.42\n20\t28861335\t870221:1\tA\tA[20:28868471[\t46\tPASS\tDISC_MAPQ=49;EVDNC=DSCRD;IMPRECISE;MAPQ=49;MATEID=870221:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=20:28861335(+)-20:28868471(-)__20_28861001_28886001D;SPAN=7136;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:16:11:4.2:46.2,4.2,0:0:16:-46.21:46.21\n20\t28868471\t870221:2\tT\t]20:28861335]T\t46\tPASS\tDISC_MAPQ=27;EVDNC=DSCRD;IMPRECISE;MAPQ=27;MATEID=870221:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=20:28861335(+)-20:28868471(-)__20_28861001_28886001D;SPAN=7136;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:16:11:4.2:46.2,4.2,0:0:16:-46.21:46.21\n20\t28897172\t870531:1\tT\tT[20:29189810[\t42\tPASS\tDISC_MAPQ=28;EVDNC=DSCRD;IMPRECISE;MAPQ=28;MATEID=870531:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=20:28897172(+)-20:29189810(-)__20_28885501_28910501D;SPAN=292638;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:15:26:22.4:42.2,0,22.4:0:15:-42.5:42.5\n20\t29062721\t873050:1\tG\tG]20:29515167]\t37\tPASS\tDISC_MAPQ=16;EVDNC=DSCRD;IMPRECISE;MAPQ=16;MATEID=873050:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=20:29062721(+)-20:29515167(+)__20_29498001_29523001D;SPAN=452446;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:33:37.1:37.1,0,43.7:0:14:-36.94:36.99\n20\t29088471\t870919:2\tT\t]4:189948866]T\t3\tPASS\tDISC_MAPQ=24;EVDNC=DSCRD;IMPRECISE;MAPQ=24;MATEID=870919:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=4:189948866(+)-20:29088471(-)__20_29081501_29106501D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:81:3.8:3.8,0,198.5:0:8:-3.64:15.33\n20\t29090598\t870923:2\tG\tG]9:63843968]\t39\tPASS\tDISC_MAPQ=27;EVDNC=DSCRD;IMPRECISE;MAPQ=27;MATEID=870923:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=9:63843968(+)-20:29090598(+)__20_29081501_29106501D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:19:83:39.5:39.5,0,168.2:0:19:-39.39:43.98\n20\t29130127\t871760:1\tA\t]20:29193597]A\t23\tPASS\tDISC_MAPQ=15;EVDNC=DSCRD;IMPRECISE;MAPQ=15;MATEID=871760:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=20:29130127(-)-20:29193597(+)__20_29179501_29204501D;SPAN=63470;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:22:23.6:23.6,0,30.2:0:9:-23.53:23.59\n20\t29152222\t871389:1\tA\t]20:29152743]A\t36\tPASS\tDISC_MAPQ=58;EVDNC=DSCRD;IMPRECISE;MAPQ=58;MATEID=871389:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=20:29152222(-)-20:29152743(+)__20_29130501_29155501D;SPAN=521;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:11:12:3.3:36.3,3.3,0:0:11:-35.86:35.86\n20\t29152583\t870075:2\tC\tC[20:28840894[\t47\tPASS\tDISC_MAPQ=55;EVDNC=ASDIS;HOMSEQ=GTGGAGAAGGAAATATCTTCACATAAAAACTATGCAGAAGCATTCTGAGAAAC;MAPQ=60;MATEID=870075:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_20_28836501_28861501_26C;SPAN=311689;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:18:44:47:47,0,63.5:13:5:-47.05:47.19\n20\t29152743\t871389:2\tT\tT[20:29152222[\t36\tPASS\tDISC_MAPQ=38;EVDNC=DSCRD;IMPRECISE;MAPQ=38;MATEID=871389:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=20:29152222(-)-20:29152743(+)__20_29130501_29155501D;SPAN=521;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:11:12:3.3:36.3,3.3,0:0:11:-35.86:35.86\n20\t29155988\t871853:1\tT\tT[20:29187554[\t75\tPASS\tDISC_MAPQ=42;EVDNC=DSCRD;IMPRECISE;MAPQ=42;MATEID=871853:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=20:29155988(+)-20:29187554(-)__20_29179501_29204501D;SPAN=31566;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:25:14:6.9:75.9,6.9,0:0:25:-75.92:75.92\n20\t29164587\t872074:1\tT\tT[20:29203980[\t23\tPASS\tDISC_MAPQ=15;EVDNC=DSCRD;IMPRECISE;MAPQ=15;MATEID=872074:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=20:29164587(+)-20:29203980(-)__20_29204001_29229001D;SPAN=39393;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:8:5:2.1:23.1,2.1,0:0:8:-23.11:23.11\n20\t29174443\t871670:1\tA\tA[20:29196966[\t42\tPASS\tDISC_MAPQ=29;EVDNC=ASDIS;HOMSEQ=ATAAAAACTACACAGAAGCATTCTGA;MAPQ=28;MATEID=871670:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_29155001_29180001_171C;SPAN=22523;SUBN=1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:14:6:3.9:42.9,3.9,0:12:2:-42.91:42.91\n20\t29187554\t871853:2\tT\t]20:29155988]T\t75\tPASS\tDISC_MAPQ=42;EVDNC=DSCRD;IMPRECISE;MAPQ=42;MATEID=871853:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=20:29155988(+)-20:29187554(-)__20_29179501_29204501D;SPAN=31566;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:25:14:6.9:75.9,6.9,0:0:25:-75.92:75.92\n20\t29189810\t870531:2\tG\t]20:28897172]G\t42\tPASS\tDISC_MAPQ=40;EVDNC=DSCRD;IMPRECISE;MAPQ=40;MATEID=870531:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=20:28897172(+)-20:29189810(-)__20_28885501_28910501D;SPAN=292638;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:15:26:22.4:42.2,0,22.4:0:15:-42.5:42.5\n20\t29193222\t871987:1\tA\t]20:29193786]A\t27\tPASS\tDISC_MAPQ=36;EVDNC=DSCRD;IMPRECISE;MAPQ=36;MATEID=871987:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=20:29193222(-)-20:29193786(+)__20_29179501_29204501D;SPAN=564;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:19:17.9:27.8,0,17.9:0:10:-27.73:27.73\n20\t29193597\t871760:2\tG\tG[20:29130127[\t23\tPASS\tDISC_MAPQ=42;EVDNC=DSCRD;IMPRECISE;MAPQ=42;MATEID=871760:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=20:29130127(-)-20:29193597(+)__20_29179501_29204501D;SPAN=63470;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:22:23.6:23.6,0,30.2:0:9:-23.53:23.59\n20\t29193786\t871987:2\tG\tG[20:29193222[\t27\tPASS\tDISC_MAPQ=40;EVDNC=DSCRD;IMPRECISE;MAPQ=40;MATEID=871987:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=20:29193222(-)-20:29193786(+)__20_29179501_29204501D;SPAN=564;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:19:17.9:27.8,0,17.9:0:10:-27.73:27.73\n20\t29196966\t871670:2\tA\t]20:29174443]A\t42\tPASS\tDISC_MAPQ=19;EVDNC=ASDIS;HOMSEQ=ATAAAAACTACACAGAAGCATTCTGA;MAPQ=60;MATEID=871670:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_29155001_29180001_171C;SPAN=22523;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:14:6:3.9:42.9,3.9,0:12:2:-42.91:42.91\n20\t29203980\t872074:2\tC\t]20:29164587]C\t23\tPASS\tDISC_MAPQ=42;EVDNC=DSCRD;IMPRECISE;MAPQ=42;MATEID=872074:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=20:29164587(+)-20:29203980(-)__20_29204001_29229001D;SPAN=39393;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:8:5:2.1:23.1,2.1,0:0:8:-23.11:23.11\n20\t29204766\t874418:1\tN\t[20:29888901[N\t99\tPASS\tDISC_MAPQ=42;EVDNC=DSCRD;IMPRECISE;MAPQ=42;MATEID=874418:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=20:29204766(-)-20:29888901(-)__20_29865501_29890501D;SPAN=684135;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:68:8:18.9:207.9,18.9,0:0:68:-208:208\n20\t29213586\t872096:1\tA\tA[20:29213887[\t85\tPASS\tDISC_MAPQ=53;EVDNC=ASDIS;HOMSEQ=GAAATATCTTCACATAAAAACTACACAGAAGCATTCTGAGAA;MAPQ=60;MATEID=872096:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_20_29204001_29229001_118C;SPAN=301;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:29:38:9.2:85.1,0,9.2:22:9:-88.4:88.4\n20\t29213887\t872096:2\tG\t]20:29213586]G\t85\tPASS\tDISC_MAPQ=56;EVDNC=ASDIS;HOMSEQ=GAAATATCTTCACATAAAAACTACACAGAAGCATTCTGAGAA;MAPQ=60;MATEID=872096:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_20_29204001_29229001_118C;SPAN=301;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:29:38:9.2:85.1,0,9.2:22:9:-88.4:88.4\n20\t29214602\t872097:1\tA\t]20:29215222]A\t24\tPASS\tDISC_MAPQ=59;EVDNC=DSCRD;IMPRECISE;MAPQ=59;MATEID=872097:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=20:29214602(-)-20:29215222(+)__20_29204001_29229001D;SPAN=620;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:31:24.5:24.5,0,50.9:0:10:-24.3:24.91\n20\t29215222\t872097:2\tA\tA[20:29214602[\t24\tPASS\tDISC_MAPQ=55;EVDNC=DSCRD;IMPRECISE;MAPQ=55;MATEID=872097:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=20:29214602(-)-20:29215222(+)__20_29204001_29229001D;SPAN=620;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:31:24.5:24.5,0,50.9:0:10:-24.3:24.91\n20\t29224086\t872116:1\tT\t]20:29224489]T\t23\tPASS\tDISC_MAPQ=27;EVDNC=ASDIS;HOMSEQ=TCTGCAAAGGGATATTTGTGAGTGCTTTGAGGCCTATGGTGAAACAGGAAATATCTTCAC;MAPQ=60;MATEID=872116:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_20_29204001_29229001_43C;SPAN=403;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:70:23.3:23.3,0,152:11:10:-23.24:28.76\n20\t29224489\t872116:2\tC\tC[20:29224086[\t23\tPASS\tDISC_MAPQ=55;EVDNC=ASDIS;HOMSEQ=TCTGCAAAGGGATATTTGTGAGTGCTTTGAGGCCTATGGTGAAACAGGAAATATCTTCAC;MAPQ=60;MATEID=872116:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_20_29204001_29229001_43C;SPAN=403;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:70:23.3:23.3,0,152:11:10:-23.24:28.76\n20\t29258255\t872237:1\tA\tA]20:29888628]\t39\tPASS\tDISC_MAPQ=36;EVDNC=DSCRD;IMPRECISE;MAPQ=36;MATEID=872237:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=20:29258255(+)-20:29888628(+)__20_29253001_29278001D;SPAN=630373;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:25:22.7:39.2,0,22.7:0:14:-39.39:39.39\n20\t29294840\t872375:1\tA\tA[20:30482683[\t23\tPASS\tDISC_MAPQ=54;EVDNC=DSCRD;IMPRECISE;MAPQ=54;MATEID=872375:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=20:29294840(+)-20:30482683(-)__20_29277501_29302501D;SPAN=1187843;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:34:23.6:23.6,0,59.9:0:10:-23.45:24.42\n20\t29375944\t168761:2\tG\t[3:75703640[G\t66\tPASS\tDISC_MAPQ=39;EVDNC=DSCRD;IMPRECISE;MAPQ=39;MATEID=168761:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=3:75703640(-)-20:29375944(-)__3_75680501_75705501D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:22:26:0.6:66,0.6,0:0:22:-69.34:69.34\n20\t29407505\t872869:2\tA\t[3:75673010[A\t33\tPASS\tDISC_MAPQ=20;EVDNC=DSCRD;IMPRECISE;MAPQ=20;MATEID=872869:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=3:75673010(-)-20:29407505(-)__20_29400001_29425001D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:45:33.5:33.5,0,79.7:0:14:-33.57:34.6\n20\t29412524\t168580:2\tN\tN]3:75668011]\t37\tPASS\tDISC_MAPQ=33;EVDNC=DSCRD;IMPRECISE;MAPQ=33;MATEID=168580:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=3:75668011(+)-20:29412524(+)__3_75656001_75681001D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:15:44:37.1:37.1,0,73.4:0:15:-37.15:37.81\n20\t29418432\t872855:2\tT\tT]3:75662822]\t23\tPASS\tDISC_MAPQ=43;EVDNC=DSCRD;IMPRECISE;MAPQ=43;MATEID=872855:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=3:75662822(+)-20:29418432(+)__20_29400001_29425001D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:23:23.3:23.3,0,33.2:0:9:-23.24:23.37\n20\t29515167\t873050:2\tG\tG]20:29062721]\t37\tPASS\tDISC_MAPQ=19;EVDNC=DSCRD;IMPRECISE;MAPQ=19;MATEID=873050:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=20:29062721(+)-20:29515167(+)__20_29498001_29523001D;SPAN=452446;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:33:37.1:37.1,0,43.7:0:14:-36.94:36.99\n20\t29565353\t875088:1\tN\t[20:30318846[N\t23\tPASS\tDISC_MAPQ=47;EVDNC=DSCRD;IMPRECISE;MAPQ=47;MATEID=875088:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=20:29565353(-)-20:30318846(-)__20_30306501_30331501D;SPAN=753493;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:23:23.3:23.3,0,33.2:0:9:-23.24:23.37\n20\t29636132\t873198:2\tT\t]9:61735346]T\t36\tPASS\tDISC_MAPQ=16;EVDNC=DSCRD;IMPRECISE;MAPQ=16;MATEID=873198:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=9:61735346(+)-20:29636132(-)__20_29620501_29645501D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:23:20:36.5,0,20:0:13:-36.66:36.66\n20\t29700083\t873591:1\tA\tA[20:29703090[\t26\tPASS\tDISC_MAPQ=49;EVDNC=DSCRD;IMPRECISE;MAPQ=49;MATEID=873591:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=20:29700083(+)-20:29703090(-)__20_29694001_29719001D;SPAN=3007;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:37:26:26,0,65.6:0:11:-25.91:26.93\n20\t29703090\t873591:2\tG\t]20:29700083]G\t26\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=873591:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=20:29700083(+)-20:29703090(-)__20_29694001_29719001D;SPAN=3007;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:37:26:26,0,65.6:0:11:-25.91:26.93\n20\t29836455\t874088:1\tA\tA[20:29837181[\t5\tPASS\tEVDNC=ASSMB;INSERTION=T;MAPQ=60;MATEID=874088:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_29816501_29841501_464C;SPAN=726;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:5:38:5.9:5.9,0,88.4:5:0:-5.824:10.24\n20\t29837181\t874088:2\tA\t]20:29836455]A\t5\tPASS\tEVDNC=ASSMB;INSERTION=T;MAPQ=60;MATEID=874088:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_29816501_29841501_464C;SPAN=726;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:5:38:5.9:5.9,0,88.4:5:0:-5.824:10.24\n20\t29851924\t908592:1\tG\t]22:11373695]G\t61\tPASS\tDISC_MAPQ=57;EVDNC=ASDIS;HOMSEQ=GAGCAGTTTTGAAACACTCTTTTTGTAGAATCTGCAAGTGGATATTTGGAG;MAPQ=60;MATEID=908592:2;MATENM=1;NM=6;NUMPARTS=2;SCTG=c_22_11368001_11393001_16C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:22:41:41.3:61.1,0,41.3:9:14:-61.28:61.28\n20\t29888628\t872237:2\tT\tT]20:29258255]\t39\tPASS\tDISC_MAPQ=54;EVDNC=DSCRD;IMPRECISE;MAPQ=54;MATEID=872237:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=20:29258255(+)-20:29888628(+)__20_29253001_29278001D;SPAN=630373;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:25:22.7:39.2,0,22.7:0:14:-39.39:39.39\n20\t29888901\t874418:2\tA\t[20:29204766[A\t99\tPASS\tDISC_MAPQ=56;EVDNC=DSCRD;IMPRECISE;MAPQ=56;MATEID=874418:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=20:29204766(-)-20:29888901(-)__20_29865501_29890501D;SPAN=684135;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:68:8:18.9:207.9,18.9,0:0:68:-208:208\n20\t29983825\t874677:1\tA\tA[20:30140273[\t99\tPASS\tDISC_MAPQ=48;EVDNC=TSI_L;HOMSEQ=AAAGGAAATATCTTCACATAAAAACTAGACAGA;MAPQ=56;MATEID=874677:2;MATENM=11;NM=1;NUMPARTS=3;SCTG=c_20_29963501_29988501_205C;SPAN=156448;SUBN=6;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:87:26:24.3:267.3,24.3,0:71:25:-267.4:267.4\n20\t30140273\t874677:2\tA\t]20:29983825]A\t99\tPASS\tDISC_MAPQ=11;EVDNC=TSI_L;HOMSEQ=AAAGGAAATATCTTCACATAAAAACTAGACAGA;MAPQ=33;MATEID=874677:1;MATENM=1;NM=11;NUMPARTS=3;SCTG=c_20_29963501_29988501_205C;SPAN=156448;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:87:26:24.3:267.3,24.3,0:71:25:-267.4:267.4\n20\t30318846\t875088:2\tG\t[20:29565353[G\t23\tPASS\tDISC_MAPQ=29;EVDNC=DSCRD;IMPRECISE;MAPQ=29;MATEID=875088:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=20:29565353(-)-20:30318846(-)__20_30306501_30331501D;SPAN=753493;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:23:23.3:23.3,0,33.2:0:9:-23.24:23.37\n20\t30482683\t872375:2\tT\t]20:29294840]T\t23\tPASS\tDISC_MAPQ=22;EVDNC=DSCRD;IMPRECISE;MAPQ=22;MATEID=872375:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=20:29294840(+)-20:30482683(-)__20_29277501_29302501D;SPAN=1187843;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:34:23.6:23.6,0,59.9:0:10:-23.45:24.42\n20\t30502676\t875478:2\tG\t]2:132270852]G\t59\tPASS\tDISC_MAPQ=33;EVDNC=DSCRD;IMPRECISE;MAPQ=33;MATEID=875478:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=2:132270852(+)-20:30502676(-)__20_30502501_30527501D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:18:20:5.4:59.4,5.4,0:0:18:-58.15:58.15\n20\t30594240\t998499:1\tG\t]Un_JTFH01000605v1_decoy:968]G\t29\tPASS\tEVDNC=ASSMB;HOMSEQ=GC;MAPQ=60;MATEID=998499:2;MATENM=1;NM=0;NUMPARTS=3;SCTG=c_1448_1_1389_5C;SPAN=-1;SUBN=2;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:13:2.9:29.3,0,2.9:10:0:-30.55:30.55\n20\t30926139\t876115:2\tT\t[19:27365941[T\t68\tPASS\tDISC_MAPQ=6;EVDNC=TSI_L;HOMSEQ=TGCATATTCTACAGAAAGACTGTTTCCAAA;MAPQ=19;MATEID=876115:1;MATENM=0;NM=5;NUMPARTS=3;REPSEQ=TT;SCTG=c_20_30919001_30944001_257C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:29:98:68.3:68.3,0,177.2:26:4:-68.18:70.92\n20\t31487269\t878350:1\tG\t]20:31768542]G\t49\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=G;MAPQ=60;MATEID=878350:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_31752001_31777001_19C;SPAN=281273;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:17:17:4.5:49.5,4.5,0:15:8:-49.51:49.51\n20\t31768542\t878350:2\tG\tG[20:31487269[\t49\tPASS\tDISC_MAPQ=55;EVDNC=ASDIS;HOMSEQ=G;MAPQ=60;MATEID=878350:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_31752001_31777001_19C;SPAN=281273;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:17:17:4.5:49.5,4.5,0:15:8:-49.51:49.51\n20\t32723074\t878580:1\tG\tG[20:32724972[\t66\tPASS\tEVDNC=ASSMB;HOMSEQ=AAAGACTTGTG;MAPQ=60;MATEID=878580:2;MATENM=0;NM=8;NUMPARTS=2;SCTG=c_20_32707501_32732501_73C;SPAN=1898;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:22:11:6:66,6,0:22:0:-66.02:66.02\n20\t32724972\t878580:2\tA\t]20:32723074]A\t66\tPASS\tEVDNC=ASSMB;HOMSEQ=AAAGACTTGTG;MAPQ=60;MATEID=878580:1;MATENM=8;NM=0;NUMPARTS=2;SCTG=c_20_32707501_32732501_73C;SPAN=1898;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:22:11:6:66,6,0:22:0:-66.02:66.02\n20\t34228132\t878957:1\tC\tC[20:34231420[\t0\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TAGAACTTTC;MAPQ=60;MATEID=878957:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_34226501_34251501_29C;SPAN=3288;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/0:15:1244:99:0,299.7,3733:10:9:300.2:14.95\n20\t34231420\t878957:2\tT\t]20:34228132]T\t0\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TAGAACTTTC;MAPQ=60;MATEID=878957:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_34226501_34251501_29C;SPAN=3288;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/0:15:1244:99:0,299.7,3733:10:9:300.2:14.95\n20\t34528026\t879054:1\tT\tT[20:34528340[\t27\tPASS\tEVDNC=ASSMB;HOMSEQ=AAAAACTACCCTACTGGAGT;MAPQ=60;MATEID=879054:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_34520501_34545501_37C;SPAN=314;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:21:23.9:27.2,0,23.9:10:0:-27.11:27.11\n20\t34528340\t879054:2\tA\t]20:34528026]A\t27\tPASS\tEVDNC=ASSMB;HOMSEQ=AAAAACTACCCTACTGGAGT;MAPQ=60;MATEID=879054:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_34520501_34545501_37C;SPAN=314;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:21:23.9:27.2,0,23.9:10:0:-27.11:27.11\n20\t35033863\t879169:1\tA\tA[20:35034175[\t17\tPASS\tEVDNC=ASSMB;HOMSEQ=AAAAGAGTAAA;MAPQ=60;MATEID=879169:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_20_35010501_35035501_48C;SPAN=312;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:43:17.6:17.6,0,90.2:9:0:-17.62:20.44\n20\t35034175\t879169:2\tA\t]20:35033863]A\t17\tPASS\tEVDNC=ASSMB;HOMSEQ=AAAAGAGTAAA;MAPQ=60;MATEID=879169:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_20_35010501_35035501_48C;SPAN=312;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:43:17.6:17.6,0,90.2:9:0:-17.62:20.44\n20\t35041059\t879174:1\tA\t]20:35041155]A\t8\tPASS\tEVDNC=ASSMB;HOMSEQ=A;MAPQ=60;MATEID=879174:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_35035001_35060001_27C;SPAN=96;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:5:27:8.9:8.9,0,58.4:5:0:-8.916:11.05\n20\t35041155\t879174:2\tA\tA[20:35041059[\t8\tPASS\tEVDNC=ASSMB;HOMSEQ=A;MAPQ=60;MATEID=879174:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_35035001_35060001_27C;SPAN=96;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:5:27:8.9:8.9,0,58.4:5:0:-8.916:11.05\n20\t35564373\t879364:1\tA\t]20:35564522]A\t52\tPASS\tEVDNC=ASSMB;HOMSEQ=A;MAPQ=60;MATEID=879364:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_35549501_35574501_16C;SPAN=149;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:20:48:52.7:52.7,0,65.9:20:0:-52.53:52.64\n20\t35564522\t879364:2\tA\tA[20:35564373[\t52\tPASS\tEVDNC=ASSMB;HOMSEQ=A;MAPQ=60;MATEID=879364:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_35549501_35574501_16C;SPAN=149;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:20:48:52.7:52.7,0,65.9:20:0:-52.53:52.64\n20\t38793597\t880214:1\tC\t]20:38793774]C\t11\tPASS\tEVDNC=ASSMB;HOMSEQ=C;MAPQ=60;MATEID=880214:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_38783501_38808501_31C;SPAN=177;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:6:32:11:11,0,67.1:6:0:-10.81:13.3\n20\t38793774\t880214:2\tC\tC[20:38793597[\t11\tPASS\tEVDNC=ASSMB;HOMSEQ=C;MAPQ=60;MATEID=880214:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_38783501_38808501_31C;SPAN=177;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:6:32:11:11,0,67.1:6:0:-10.81:13.3\n20\t40861608\t880606:2\tG\t[1:119717902[G\t99\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;MAPQ=60;MATEID=880606:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_40841501_40866501_68C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:52:21:14.4:158.4,14.4,0:29:38:-158.4:158.4\n20\t40863081\t880611:1\tC\tC[20:40871469[\t99\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=880611:2;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_20_40866001_40891001_69C;SPAN=8388;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:35:25:9.6:105.6,9.6,0:35:0:-105.6:105.6\n20\t40871469\t880611:2\tT\t]20:40863081]T\t99\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=880611:1;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_20_40866001_40891001_69C;SPAN=8388;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:35:25:9.6:105.6,9.6,0:35:0:-105.6:105.6\n20\t40888416\t881229:1\tG\t]20:42600872]G\t12\tPASS\tEVDNC=ASSMB;HOMSEQ=GT;MAPQ=60;MATEID=881229:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_42581001_42606001_108C;SPAN=1712456;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:51:12.2:12.2,0,114.5:8:0:-12.07:17.05\n20\t41014579\t880709:1\tT\t]20:41077934]T\t33\tPASS\tEVDNC=ASSMB;HOMSEQ=TGG;MAPQ=60;MATEID=880709:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_41062001_41087001_8C;SPAN=63355;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:44:33.8:33.8,0,76.7:14:0:-33.85:34.77\n20\t41077934\t880709:2\tG\tG[20:41014579[\t33\tPASS\tEVDNC=ASSMB;HOMSEQ=TGG;MAPQ=60;MATEID=880709:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_41062001_41087001_8C;SPAN=63355;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:44:33.8:33.8,0,76.7:14:0:-33.85:34.77\n20\t41100800\t880736:1\tA\t]20:41153377]A\t37\tPASS\tEVDNC=ASSMB;INSERTION=TCATCTGCAGCCTCAAACCC;MAPQ=60;MATEID=880736:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_41135501_41160501_11C;SPAN=52577;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:16:54:37.7:37.7,0,97.1:16:0:-37.64:39.14\n20\t41153377\t880736:2\tC\tC[20:41100800[\t37\tPASS\tEVDNC=ASSMB;INSERTION=TCATCTGCAGCCTCAAACCC;MAPQ=60;MATEID=880736:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_41135501_41160501_11C;SPAN=52577;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:16:54:37.7:37.7,0,97.1:16:0:-37.64:39.14\n20\t41277735\t880780:1\tG\tG[20:41278845[\t99\tPASS\tDISC_MAPQ=54;EVDNC=ASDIS;HOMSEQ=TCACTGCAAGCTCCGCCTCCCGGGTTCATGCCATTCTCCTGCCTCAGCCTCCTGAGTAGCTGGGACTACAGG;MAPQ=60;MATEID=880780:2;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_20_41258001_41283001_45C;SPAN=1110;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:50:50:13.8:151.8,13.8,0:28:32:-151.8:151.8\n20\t41278845\t880780:2\tT\t]20:41277735]T\t99\tPASS\tDISC_MAPQ=56;EVDNC=ASDIS;HOMSEQ=TCACTGCAAGCTCCGCCTCCCGGGTTCATGCCATTCTCCTGCCTCAGCCTCCTGAGTAGCTGGGACTACAGG;MAPQ=60;MATEID=880780:1;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_20_41258001_41283001_45C;SPAN=1110;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:50:50:13.8:151.8,13.8,0:28:32:-151.8:151.8\n20\t42187003\t881086:1\tT\t[20:57243066[T\t99\tPASS\tDISC_MAPQ=57;EVDNC=ASDIS;HOMSEQ=TC;MAPQ=60;MATEID=881086:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_42164501_42189501_4C;SPAN=15056063;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:35:50:22.4:101.6,0,22.4:17:25:-104.1:104.1\n20\t42213358\t881105:1\tT\t]20:42215833]T\t23\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=881105:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=20:42213358(-)-20:42215833(+)__20_42213501_42238501D;SPAN=2475;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:44:23.9:23.9,0,86.6:0:11:-23.94:25.95\n20\t42215833\t881105:2\tC\tC[20:42213358[\t23\tPASS\tDISC_MAPQ=47;EVDNC=DSCRD;IMPRECISE;MAPQ=47;MATEID=881105:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=20:42213358(-)-20:42215833(+)__20_42213501_42238501D;SPAN=2475;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:44:23.9:23.9,0,86.6:0:11:-23.94:25.95\n20\t42220432\t881117:1\tC\t]20:42244661]C\t58\tPASS\tEVDNC=ASSMB;HOMSEQ=C;MAPQ=60;MATEID=881117:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_42238001_42263001_7C;SPAN=24229;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:21:40:41.6:58.1,0,41.6:21:0:-58.2:58.2\n20\t42241304\t883732:1\tG\t]20:49308943]G\t99\tPASS\tEVDNC=ASSMB;HOMSEQ=GGA;MAPQ=60;MATEID=883732:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_49294001_49319001_43C;SPAN=7067639;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:31:34:9.3:102.3,9.3,0:31:0:-100.8:100.8\n20\t42244661\t881117:2\tC\tC[20:42220432[\t58\tPASS\tEVDNC=ASSMB;HOMSEQ=C;MAPQ=60;MATEID=881117:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_42238001_42263001_7C;SPAN=24229;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:21:40:41.6:58.1,0,41.6:21:0:-58.2:58.2\n20\t42374557\t881140:2\tC\t[17:58625792[C\t99\tPASS\tDISC_MAPQ=57;EVDNC=ASDIS;HOMSEQ=C;MAPQ=60;MATEID=881140:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_42360501_42385501_15C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:49:34:13.5:148.5,13.5,0:31:28:-148.5:148.5\n20\t42447943\t881169:2\tT\t]1:114822463]T\t99\tPASS\tEVDNC=ASSMB;HOMSEQ=T;MAPQ=60;MATEID=881169:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_42434001_42459001_33C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:51:41:14.1:155.1,14.1,0:51:0:-155.1:155.1\n20\t42600872\t881229:2\tT\tT[20:40888416[\t12\tPASS\tEVDNC=ASSMB;HOMSEQ=GT;MAPQ=60;MATEID=881229:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_42581001_42606001_108C;SPAN=1712456;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:51:12.2:12.2,0,114.5:8:0:-12.07:17.05\n20\t42679541\t881265:2\tG\tG[1:119844586[\t99\tPASS\tEVDNC=ASSMB;HOMSEQ=GG;MAPQ=60;MATEID=881265:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_20_42679001_42704001_19C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:40:27:11.1:122.1,11.1,0:40:0:-122.1:122.1\n20\t43396070\t881430:1\tT\tT[20:43397151[\t89\tPASS\tDISC_MAPQ=57;EVDNC=DSCRD;IMPRECISE;MAPQ=57;MATEID=881430:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=20:43396070(+)-20:43397151(-)__20_43389501_43414501D;SPAN=1081;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:29:6:8.1:89.1,8.1,0:0:29:-89.12:89.12\n20\t43397151\t881430:2\tA\t]20:43396070]A\t89\tPASS\tDISC_MAPQ=57;EVDNC=DSCRD;IMPRECISE;MAPQ=57;MATEID=881430:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=20:43396070(+)-20:43397151(-)__20_43389501_43414501D;SPAN=1081;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:29:6:8.1:89.1,8.1,0:0:29:-89.12:89.12\n20\t43568137\t881500:1\tG\t]20:50015936]G\t62\tPASS\tEVDNC=ASSMB;HOMSEQ=GG;MAPQ=60;MATEID=881500:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_43561001_43586001_0C;SPAN=6447799;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:20:21:5.7:62.7,5.7,0:20:0:-62.72:62.72\n20\t43595420\t883769:1\tG\t]20:49349984]G\t99\tPASS\tDISC_MAPQ=54;EVDNC=ASDIS;HOMSEQ=GTGC;MAPQ=60;MATEID=883769:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_49343001_49368001_42C;SPAN=5754564;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:36:28:9.9:108.9,9.9,0:26:24:-108.9:108.9\n20\t43643335\t881547:1\tA\tA[20:43645931[\t92\tPASS\tDISC_MAPQ=46;EVDNC=DSCRD;IMPRECISE;MAPQ=46;MATEID=881547:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=20:43643335(+)-20:43645931(-)__20_43634501_43659501D;SPAN=2596;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:30:1:8.4:92.4,8.4,0:0:30:-92.42:92.42\n20\t43645931\t881547:2\tC\t]20:43643335]C\t92\tPASS\tDISC_MAPQ=52;EVDNC=DSCRD;IMPRECISE;MAPQ=52;MATEID=881547:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=20:43643335(+)-20:43645931(-)__20_43634501_43659501D;SPAN=2596;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:30:1:8.4:92.4,8.4,0:0:30:-92.42:92.42\n20\t43696487\t881586:1\tC\t]20:43697013]C\t80\tPASS\tEVDNC=ASSMB;HOMSEQ=CTGGGATTACAGGCGTGAGCCAC;MAPQ=60;MATEID=881586:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_43683501_43708501_25C;SPAN=526;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:31:78:80.6:80.6,0,113.6:31:0:-80.41:80.76\n20\t43697013\t881586:2\tC\tC[20:43696487[\t80\tPASS\tEVDNC=ASSMB;HOMSEQ=CTGGGATTACAGGCGTGAGCCAC;MAPQ=60;MATEID=881586:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_43683501_43708501_25C;SPAN=526;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:31:78:80.6:80.6,0,113.6:31:0:-80.41:80.76\n20\t44025527\t99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\tA\tA[20:42241304[\t99\tPASS\tEVDNC=ASSMB;HOMSEQ=GGA;MAPQ=60;MATEID=883732:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_49294001_49319001_43C;SPAN=7067639;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:31:34:9.3:102.3,9.3,0:31:0:-100.8:100.8\n20\t49309026\t883730:2\tA\t]1:113786165]A\t47\tPASS\tEVDNC=ASSMB;HOMSEQ=AGAT;MAPQ=60;MATEID=883730:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_49294001_49319001_84C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:17:32:30.8:47.3,0,30.8:17:0:-47.25:47.25\n20\t49325638\t883756:1\tT\t]20:49325721]T\t73\tPASS\tDISC_MAPQ=255;EVDNC=TSI_G;INSERTION=TTGTGAGAATTAAATGAAGTCATGTATGGGACTTGCTTGGTTTAGCATCCAAAGCACAATGAACAGGGTTATTAGATGGATGTTGTGAGAATTAAATGAAGTCATGTATGGGACTTGCTTGGTTTAGCATCCAAAGCACAATGAACGGGGTTATTAGATGGA;MAPQ=60;MATEID=883756:2;MATENM=0;NM=0;NUMPARTS=3;SCTG=c_20_49318501_49343501_41C;SPAN=83;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:31:104:73.1:73.1,0,188.6:31:0:-73.1:75.93\n20\t49325721\t883756:2\tG\tG[20:49325638[\t73\tPASS\tDISC_MAPQ=255;EVDNC=TSI_G;INSERTION=TTGTGAGAATTAAATGAAGTCATGTATGGGACTTGCTTGGTTTAGCATCCAAAGCACAATGAACAGGGTTATTAGATGGATGTTGTGAGAATTAAATGAAGTCATGTATGGGACTTGCTTGGTTTAGCATCCAAAGCACAATGAACGGGGTTATTAGATGGA;MAPQ=60;MATEID=883756:1;MATENM=0;NM=0;NUMPARTS=3;SCTG=c_20_49318501_49343501_41C;SPAN=83;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:31:104:73.1:73.1,0,188.6:31:0:-73.1:75.93\n20\t49349984\t883769:2\tC\tC[20:43595420[\t99\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=GTGC;MAPQ=60;MATEID=883769:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_49343001_49368001_42C;SPAN=5754564;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:36:28:9.9:108.9,9.9,0:26:24:-108.9:108.9\n20\t49351536\t885112:1\tT\t[20:52068428[T\t70\tPASS\tDISC_MAPQ=55;EVDNC=ASDIS;HOMSEQ=T;MAPQ=60;MATEID=885112:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_52062501_52087501_17C;SPAN=2716892;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:24:31:4.7:70.7,0,4.7:19:10:-73.47:73.47\n20\t49875445\t883982:2\tG\t[17:82953195[G\t95\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AC;MAPQ=60;MATEID=883982:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_49857501_49882501_45C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:32:31:8.7:95.7,8.7,0:24:12:-95.72:95.72\n20\t50015936\t881500:2\tG\tG[20:43568137[\t62\tPASS\tEVDNC=ASSMB;HOMSEQ=GG;MAPQ=60;MATEID=881500:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_43561001_43586001_0C;SPAN=6447799;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:20:21:5.7:62.7,5.7,0:20:0:-62.72:62.72\n20\t50110068\t884135:2\tG\t[17:61398559[G\t17\tPASS\tDISC_MAPQ=51;EVDNC=ASDIS;HOMSEQ=GGC;MAPQ=60;MATEID=884135:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_50102501_50127501_30C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:34:17:17,0,66.5:4:6:-16.85:18.63\n20\t50678547\t889981:1\tG\t[20:63864221[G\t44\tPASS\tDISC_MAPQ=255;EVDNC=ASDIS;HOMSEQ=C;MAPQ=60;MATEID=889981:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_63847001_63872001_13C;SPAN=13185674;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:16:29:28.1:44.6,0,28.1:6:10:-44.86:44.86\n20\t50816138\t884415:1\tG\t]20:50816769]G\t75\tPASS\tEVDNC=ASSMB;HOMSEQ=GCCTCAGCCTCCTGAGTAGCTGGGACTACAGAC;MAPQ=60;MATEID=884415:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_20_50813001_50838001_17C;SPAN=631;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:29:73:75.2:75.2,0,108.2:29:0:-75.21:75.54\n20\t50816769\t884415:2\tC\tC[20:50816138[\t75\tPASS\tEVDNC=ASSMB;HOMSEQ=GCCTCAGCCTCCTGAGTAGCTGGGACTACAGAC;MAPQ=60;MATEID=884415:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_20_50813001_50838001_17C;SPAN=631;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:29:73:75.2:75.2,0,108.2:29:0:-75.21:75.54\n20\t51129425\t884509:2\tG\t[1:107571647[G\t99\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;MAPQ=60;MATEID=884509:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_51107001_51132001_42C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:35:38:10.5:115.5,10.5,0:22:32:-114.4:114.4\n20\t51227568\t884570:2\tC\t[20:47911413[C\t36\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=C;MAPQ=60;MATEID=884570:1;MATENM=1;NM=2;NUMPARTS=2;SCTG=c_20_51205001_51230001_24C;SPAN=3316155;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:15:46:36.8:36.8,0,76.4:12:4:-36.59:37.45\n20\t51228057\t884572:2\tT\tT[20:47941032[\t29\tPASS\tEVDNC=ASSMB;HOMSEQ=CT;MAPQ=60;MATEID=884572:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_51205001_51230001_7C;SPAN=3287025;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:47:29.9:29.9,0,86:13:0:-29.7:31.34\n20\t51569452\t889168:1\tG\t[20:62201797[G\t24\tPASS\tDISC_MAPQ=255;EVDNC=ASDIS;HOMSEQ=TATC;MAPQ=60;MATEID=889168:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_62181001_62206001_66C;SPAN=10632345;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:31:24.5:24.5,0,50.9:7:8:-24.3:24.91\n20\t52003779\t885044:2\tA\tA[17:75280201[\t61\tPASS\tEVDNC=ASSMB;INSERTION=G;MAPQ=60;MATEID=885044:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_51989001_52014001_51C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:22:39:35.3:61.7,0,35.3:22:0:-62:62\n20\t52041378\t885085:2\tT\tT[20:47926746[\t37\tPASS\tEVDNC=ASSMB;HOMSEQ=T;MAPQ=60;MATEID=885085:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_52038001_52063001_110C;SPAN=4114632;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:33:37.1:37.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G=c_20_58481501_58506501_64C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:59:26.3:26.3,0,122:11:2:-26.33:29.85\n20\t58564979\t887490:1\tC\tC[20:58565296[\t0\tPASS\tEVDNC=ASSMB;HOMSEQ=CTGGGATTACAGGCGTGAGCCAC;MAPQ=60;MATEID=887490:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_58555001_58580001_7C;SPAN=317;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/0:7:104:6:0,6,273.9:7:0:6.127:12.2\n20\t58565296\t887490:2\tC\t]20:58564979]C\t0\tPASS\tEVDNC=ASSMB;HOMSEQ=CTGGGATTACAGGCGTGAGCCAC;MAPQ=60;MATEID=887490:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_58555001_58580001_7C;SPAN=317;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/0:7:104:6:0,6,273.9:7:0:6.127:12.2\n20\t59000016\t887724:1\tC\tC[20:59000298[\t0\tPASS\tEVDNC=ASSMB;HOMSEQ=AACCCGGGAGGCGGAGGTTGCAGTGAGC;MAPQ=60;MATEID=887724:2;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_20_58996001_59021001_31C;SPAN=282;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/0:6:94:6.3:0,6.3,247.5:6:0:6.617:10.32\n20\t59000298\t887724:2\tA\t]20:59000016]A\t0\tPASS\tEVDNC=ASSMB;HOMSEQ=AACCCGGGAGGCGGAGGTTGCAGTGAGC;MAPQ=60;MATEID=887724:1;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_20_58996001_59021001_31C;SPAN=282;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/0:6:94:6.3:0,6.3,247.5:6:0:6.617:10.32\n20\t59473634\t887898:2\tC\t[17:48813086[C\t13\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AG;MAPQ=60;MATEID=887898:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_59461501_59486501_31C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:48:13.1:13.1,0,105.5:4:6:-12.92:17.28\n20\t59474085\t887899:2\tT\t[20:56932721[T\t30\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=T;MAPQ=60;MATEID=887899:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_59461501_59486501_12C;SPAN=2541364;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:56:30.5:30.5,0,109.7:10:7:-30.47:33.03\n20\t59554986\t887941:1\tG\tG[20:59640392[\t21\tPASS\tEVDNC=ASSMB;HOMSEQ=CTGG;MAPQ=60;MATEID=887941:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_59535001_59560001_9C;SPAN=85406;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:30:21.2:21.2,0,54.2:9:0:-21.28:22.07\n20\t59640392\t887941:2\tC\t]20:59554986]C\t21\tPASS\tEVDNC=ASSMB;HOMSEQ=CTGG;MAPQ=60;MATEID=887941:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_59535001_59560001_9C;SPAN=85406;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:30:21.2:21.2,0,54.2:9:0:-21.28:22.07\n20\t60270342\t888229:2\tT\t[17:61210341[T\t99\tPASS\tDISC_MAPQ=58;EVDNC=ASDIS;HOMSEQ=TGTG;MAPQ=60;MATEID=888229:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_60270001_60295001_15C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:97:155:99:276.8,0,111.8:59:56:-280.3:280.3\n20\t60314398\t888245:1\tT\t]20:60314900]T\t4\tPASS\tDISC_MAPQ=42;EVDNC=DSCRD;IMPRECISE;MAPQ=42;MATEID=888245:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=20:60314398(-)-20:60314900(+)__20_60294501_60319501D;SPAN=502;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:80:4.1:4.1,0,195.5:0:8:-3.921:15.38\n20\t60314900\t888245:2\tC\tC[20:60314398[\t4\tPASS\tDISC_MAPQ=48;EVDNC=DSCRD;IMPRECISE;MAPQ=48;MATEID=888245:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=20:60314398(-)-20:60314900(+)__20_60294501_60319501D;SPAN=502;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:80:4.1:4.1,0,195.5:0:8:-3.921:15.38\n20\t60621324\t888361:1\tA\tA[20:60622238[\t0\tPASS\tEVDNC=ASSMB;HOMSEQ=A;MAPQ=60;MATEID=888361:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_60613001_60638001_18C;SPAN=914;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/0:6:85:3.9:0,3.9,221.1:6:0:4.087:10.59\n20\t60622238\t888361:2\tA\t]20:60621324]A\t0\tPASS\tEVDNC=ASSMB;HOMSEQ=A;MAPQ=60;MATEID=888361:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_60613001_60638001_18C;SPAN=914;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/0:6:85:3.9:0,3.9,221.1:6:0:4.087:10.59\n20\t61007224\t888548:1\tA\tA[20:61030462[\t24\tPASS\tEVDNC=ASSMB;HOMSEQ=CA;MAPQ=60;MATEID=888548:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_61029501_61054501_3C;SPAN=23238;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:42:24.5:24.5,0,80.6:11:0:-24.51:26.21\n20\t61030462\t888548:2\tC\t]20:61007224]C\t24\tPASS\tEVDNC=ASSMB;HOMSEQ=CA;MAPQ=60;MATEID=888548:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_61029501_61054501_3C;SPAN=23238;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:42:24.5:24.5,0,80.6:11:0:-24.51:26.21\n20\t61329284\t888678:1\tT\t]20:61329445]T\t99\tPASS\tEVDNC=ASSMB;INSERTION=TCGTGGGTCTGGGACGCGGGTCGAGGTGGC;MAPQ=60;MATEID=888678:2;MATENM=2;NM=5;NUMPARTS=2;SCTG=c_20_61323501_61348501_127C;SPAN=161;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:43:151:99:99.5,0,281:43:0:-99.5:104.3\n20\t61329445\t888678:2\tC\tC[20:61329284[\t99\tPASS\tEVDNC=ASSMB;INSERTION=TCGTGGGTCTGGGACGCGGGTCGAGGTGGC;MAPQ=60;MATEID=888678:1;MATENM=5;NM=2;NUMPARTS=2;SCTG=c_20_61323501_61348501_127C;SPAN=161;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:43:151:99:99.5,0,281:43:0:-99.5:104.3\n20\t61337291\t888671:2\tA\t]1:7429774]A\t16\tPASS\tDISC_MAPQ=36;EVDNC=DSCRD;IMPRECISE;MAPQ=36;MATEID=888671:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:7429774(+)-20:61337291(-)__20_61323501_61348501D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:59:16.4:16.4,0,131.9:0:10:-16.43:21.68\n20\t61529111\t810968:2\tA\tA]17:62660892]\t60\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=810968:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=17:62660892(+)-20:61529111(+)__17_62646501_62671501D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:21:32:17.6:60.5,0,17.6:0:21:-61.42:61.42\n20\t61945453\t889051:1\tG\t]20:61946491]G\t28\tPASS\tDISC_MAPQ=48;EVDNC=DSCRD;IMPRECISE;MAPQ=48;MATEID=889051:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=20:61945453(-)-20:61946491(+)__20_61936001_61961001D;SPAN=1038;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:40:28.4:28.4,0,71.3:0:12:-28.37:29.43\n20\t61946491\t889051:2\tG\tG[20:61945453[\t28\tPASS\tDISC_MAPQ=35;EVDNC=DSCRD;IMPRECISE;MAPQ=35;MATEID=889051:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=20:61945453(-)-20:61946491(+)__20_61936001_61961001D;SPAN=1038;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:40:28.4:28.4,0,71.3:0:12:-28.37:29.43\n20\t62169401\t889179:1\tT\tT]20:62211164]\t18\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=889179:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=20:62169401(+)-20:62211164(+)__20_62205501_62230501D;SPAN=41763;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:28:18.5:18.5,0,51.5:0:8:-18.54:19.42\n20\t62201797\t889168:2\tT\t[20:51569452[T\t24\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TATC;MAPQ=60;MATEID=889168:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_62181001_62206001_66C;SPAN=10632345;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:31:24.5:24.5,0,50.9:7:8:-24.3:24.91\n20\t62211164\t889179:2\tC\tC]20:62169401]\t18\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=889179:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=20:62169401(+)-20:62211164(+)__20_62205501_62230501D;SPAN=41763;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:28:18.5:18.5,0,51.5:0:8:-18.54:19.42\n21\t6070645\t891075:2\tT\tT]1:248752958]\t26\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=891075:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:248752958(+)-21:6070645(+)__21_6051501_6076501D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:9:2:2.4:26.4,2.4,0:0:9:-26.41:26.41\n21\t6374495\t891103:1\tG\tG[21:6374996[\t52\tPASS\tDISC_MAPQ=16;EVDNC=ASDIS;INSERTION=AGGGGCT;MAPQ=16;MATEID=891103:2;MATENM=2;NM=6;NUMPARTS=2;SCTG=c_21_6370001_6395001_27C;SPAN=501;SUBN=1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:21:60:52.4:52.4,0,98.6:15:8:-52.46:53.23\n21\t6374996\t891103:2\tC\t]21:6374495]C\t52\tPASS\tDISC_MAPQ=10;EVDNC=ASDIS;INSERTION=AGGGGCT;MAPQ=44;MATEID=891103:1;MATENM=6;NM=2;NUMPARTS=2;SCTG=c_21_6370001_6395001_27C;SPAN=501;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:21:60:52.4:52.4,0,98.6:15:8:-52.46:53.23\n21\t7957991\t892538:2\tC\tC[20:28728974[\t26\tPASS\tDISC_MAPQ=22;EVDNC=DSCRD;IMPRECISE;MAPQ=22;MATEID=892538:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=20:28728974(-)-21:7957991(+)__21_7938001_7963001D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:15:81:26.9:26.9,0,175.4:0:15:-26.75:33.16\n21\t7969771\t892860:2\tG\t[13:16013417[G\t20\tPASS\tDISC_MAPQ=28;EVDNC=DSCRD;IMPRECISE;MAPQ=28;MATEID=892860:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16013417(-)-21:7969771(-)__21_7962501_7987501D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:35:20:20,0,66.2:0:9:-19.87:21.36\n21\t9008766\t893297:1\tC\tC[21:9019038[\t28\tPASS\tEVDNC=ASSMB;INSERTION=ACACAATGGACAATG;MAPQ=60;MATEID=893297:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_21_9016001_9041001_175C;SPAN=10272;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:16:8.9:28.7,0,8.9:10:0:-28.89:28.89\n21\t9012539\t893275:1\tC\tC[21:9015175[\t29\tPASS\tDISC_MAPQ=23;EVDNC=DSCRD;IMPRECISE;MAPQ=23;MATEID=893275:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=21:9012539(+)-21:9015175(-)__21_8991501_9016501D;SPAN=2636;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:15:73:29:29,0,154.4:0:15:-29:33.92\n21\t9015175\t893275:2\tT\t]21:9012539]T\t29\tPASS\tDISC_MAPQ=34;EVDNC=DSCRD;IMPRECISE;MAPQ=34;MATEID=893275:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=21:9012539(+)-21:9015175(-)__21_8991501_9016501D;SPAN=2636;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:15:73:29:29,0,154.4:0:15:-29:33.92\n21\t9019038\t893297:2\tG\t]21:9008766]G\t28\tPASS\tEVDNC=ASSMB;INSERTION=ACACAATGGACAATG;MAPQ=44;MATEID=893297:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_21_9016001_9041001_175C;SPAN=10272;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:16:8.9:28.7,0,8.9:10:0:-28.89:28.89\n21\t9997182\t894173:1\tG\tG[21:9997486[\t38\tPASS\tDISC_MAPQ=32;EVDNC=ASDIS;HOMSEQ=AGATAATGCAGTAAGG;MAPQ=60;MATEID=894173:2;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_21_9996001_10021001_249C;SPAN=304;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:29:34.7:38,0,34.7:4:10:-38.07:38.07\n21\t9997486\t894173:2\tA\t]21:9997182]A\t38\tPASS\tDISC_MAPQ=37;EVDNC=ASDIS;HOMSEQ=AGATAATGCAGTAAGG;MAPQ=60;MATEID=894173:1;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_21_9996001_10021001_249C;SPAN=304;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:29:34.7:38,0,34.7:4:10:-38.07:38.07\n21\t10271538\t894303:1\tA\t[21:10324402[A\t36\tPASS\tDISC_MAPQ=34;EVDNC=DSCRD;IMPRECISE;MAPQ=34;MATEID=894303:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=21:10271538(-)-21:10324402(-)__21_10265501_10290501D;SPAN=52864;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:12:12:3.3:36.3,3.3,0:0:12:-36.31:36.31\n21\t10324402\t894303:2\tC\t[21:10271538[C\t36\tPASS\tDISC_MAPQ=54;EVDNC=DSCRD;IMPRECISE;MAPQ=54;MATEID=894303:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=21:10271538(-)-21:10324402(-)__21_10265501_10290501D;SPAN=52864;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:12:12:3.3:36.3,3.3,0:0:12:-36.31:36.31\n21\t10489827\t895070:1\tG\t]22:45595928]G\t35\tPASS\tDISC_MAPQ=15;EVDNC=DSCRD;IMPRECISE;MAPQ=15;MATEID=895070:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=21:10489827(-)-22:45595928(+)__21_10486001_10511001D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:26:29:35.6,0,29:0:13:-35.63:35.63\n21\t10543018\t895113:1\tT\tT[21:10543301[\t99\tPASS\tEVDNC=ASSMB;HOMSEQ=CTGACTGTATTCTTTT;MAPQ=60;MATEID=895113:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_21_10535001_10560001_101C;SPAN=283;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:49:28:13.5:148.5,13.5,0:49:0:-148.5:148.5\n21\t10543301\t895113:2\tC\t]21:10543018]C\t99\tPASS\tEVDNC=ASSMB;HOMSEQ=CTGACTGTATTCTTTT;MAPQ=60;MATEID=895113:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_21_10535001_10560001_101C;SPAN=283;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:49:28:13.5:148.5,13.5,0:49:0:-148.5:148.5\n21\t10571807\t895138:1\tG\tG[21:10572230[\t0\tPASS\tEVDNC=ASSMB;HOMSEQ=ACTTGAGGCCAGGAGTTCAAG;MAPQ=60;MATEID=895138:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_21_10559501_10584501_196C;SPAN=423;SUBN=1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/0:4:78:8.4:0,8.4,211.2:4:0:8.721:6.488\n21\t10572230\t895138:2\tA\t]21:10571807]A\t0\tPASS\tEVDNC=ASSMB;HOMSEQ=ACTTGAGGCCAGGAGTTCAAG;MAPQ=60;MATEID=895138:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_21_10559501_10584501_196C;SPAN=423;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/0:4:78:8.4:0,8.4,211.2:4:0:8.721:6.488\n21\t10664259\t895599:1\tT\tT[21:10664824[\t0\tPASS\tEVDNC=ASSMB;HOMSEQ=GAGTCCATTCCATTGCATTCCATTCCATT;MAPQ=60;MATEID=895599:2;MATENM=2;NM=1;NUMPARTS=2;SCTG=c_21_10657501_10682501_180C;SPAN=565;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/0:7:117:9.6:0,9.6,313.5:7:0:9.781:11.83\n21\t10664824\t895599:2\tG\t]21:10664259]G\t0\tPASS\tEVDNC=ASSMB;HOMSEQ=GAGTCCATTCCATTGCATTCCATTCCATT;MAPQ=60;MATEID=895599:1;MATENM=1;NM=2;NUMPARTS=2;SCTG=c_21_10657501_10682501_180C;SPAN=565;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/0:7:117:9.6:0,9.6,313.5:7:0:9.781:11.83\n21\t10722194\t896148:1\tT\tT[21:10728890[\t0\tPASS\tDISC_MAPQ=38;EVDNC=DSCRD;IMPRECISE;MAPQ=38;MATEID=896148:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=21:10722194(+)-21:10728890(-)__21_10706501_10731501D;SPAN=6696;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/0:9:161:15.4:0,15.4,435.7:0:9:15.55:14.94\n21\t10728890\t896148:2\tT\t]21:10722194]T\t0\tPASS\tDISC_MAPQ=19;EVDNC=DSCRD;IMPRECISE;MAPQ=19;MATEID=896148:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=21:10722194(+)-21:10728890(-)__21_10706501_10731501D;SPAN=6696;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/0:9:161:15.4:0,15.4,435.7:0:9:15.55:14.94\n21\t10789057\t896677:2\tT\tT[13:16016553[\t82\tPASS\tDISC_MAPQ=20;EVDNC=ASDIS;HOMSEQ=GAAGCATTCTGAGAAACTTCTTT;MAPQ=56;MATEID=896677:1;MATENM=0;NM=14;NUMPARTS=2;SCTG=c_21_10780001_10805001_326C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:33:95:82.4:82.4,0,155:11:22:-82.23:83.51\n21\t10798083\t896709:2\tT\t[20:28757851[T\t0\tPASS\tDISC_MAPQ=20;EVDNC=DSCRD;IMPRECISE;MAPQ=20;MATEID=896709:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=20:28757851(-)-21:10798083(-)__21_10780001_10805001D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/0:8:151:16:0,16,412.6:0:8:16.04:13.09\n21\t10807278\t896848:1\tT\tT[21:10807788[\t0\tPASS\tDISC_MAPQ=37;EVDNC=ASDIS;HOMSEQ=TTCT;MAPQ=60;MATEID=896848:2;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_21_10804501_10829501_120C;SPAN=510;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/0:12:242:28:0,28,663.4:12:4:28.41:19.29\n21\t10807788\t896848:2\tT\t]21:10807278]T\t0\tPASS\tDISC_MAPQ=13;EVDNC=ASDIS;HOMSEQ=TTCT;MAPQ=27;MATEID=896848:1;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_21_10804501_10829501_120C;SPAN=510;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/0:12:242:28:0,28,663.4:12:4:28.41:19.29\n21\t13444519\t897143:1\tT\tT[21:13445846[\t52\tPASS\tEVDNC=ASSMB;INSERTION=AAGTGCTACTACT;MAPQ=60;MATEID=897143:2;MATENM=4;NM=1;NUMPARTS=2;SCTG=c_21_13426001_13451001_46C;SPAN=1327;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:18:8:4.8:52.8,4.8,0:18:0:-52.81:52.81\n21\t13445846\t897143:2\tA\t]21:13444519]A\t52\tPASS\tEVDNC=ASSMB;INSERTION=AAGTGCTACTACT;MAPQ=60;MATEID=897143:1;MATENM=1;NM=4;NUMPARTS=2;SCTG=c_21_13426001_13451001_46C;SPAN=1327;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:18:8:4.8:52.8,4.8,0:18:0:-52.81:52.81\n21\t17240014\t898019:1\tA\tA[21:17241316[\t46\tPASS\tEVDNC=ASSMB;HOMSEQ=ATA;MAPQ=60;MATEID=898019:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_21_17223501_17248501_5C;SPAN=1302;SUBN=2;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:16:8:4.2:46.2,4.2,0:16:0:-46.21:46.21\n21\t17241316\t898019:2\tA\t]21:17240014]A\t46\tPASS\tEVDNC=ASSMB;HOMSEQ=ATA;MAPQ=60;MATEID=898019:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_21_17223501_17248501_5C;SPAN=1302;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:16:8:4.2:46.2,4.2,0:16:0:-46.21:46.21\n21\t18857736\t898387:2\tC\t]4:76427327]C\t23\tPASS\tDISC_MAPQ=45;EVDNC=DSCRD;IMPRECISE;MAPQ=45;MATEID=898387:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=4:76427327(+)-21:18857736(-)__21_18840501_18865501D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:12:6.5:23,0,6.5:0:8:-23.49:23.49\n21\t21235316\t899250:1\tA\t]21:21423970]A\t91\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=899250:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_21_21413001_21438001_26C;SPAN=188654;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:33:63:65:91.4,0,65:33:0:-91.41:91.41\n21\t21252378\t899423:1\tT\t]21:22048768]T\t19\tPASS\tDISC_MAPQ=255;EVDNC=ASDIS;INSERTION=T;MAPQ=60;MATEID=899423:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_21_22025501_22050501_1C;SPAN=796390;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:7:12:9.8:19.7,0,9.8:3:4:-19.89:19.89\n21\t21279138\t899260:1\tA\t]21:21438423]A\t99\tPASS\tEVDNC=ASSMB;HOMSEQ=AG;MAPQ=60;MATEID=899260:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_21_21437501_21462501_20C;SPAN=159285;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:39:39:10.8:118.8,10.8,0:39:0:-118.8:118.8\n21\t21325912\t899202:1\tT\t]21:21578930]T\t19\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TT;MAPQ=60;MATEID=899202:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_21_21315001_21340001_25C;SPAN=253018;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:61:19.4:19.4,0,131.6:8:4:-19.16:24.18\n21\t21423970\t899250:2\tC\tC[21:21235316[\t91\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=899250:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_21_21413001_21438001_26C;SPAN=188654;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:33:63:65:91.4,0,65:33:0:-91.41:91.41\n21\t21438423\t899260:2\tG\tG[21:21279138[\t99\tPASS\tEVDNC=ASSMB;HOMSEQ=AG;MAPQ=60;MATEID=899260:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_21_21437501_21462501_20C;SPAN=159285;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:39:39:10.8:118.8,10.8,0:39:0:-118.8:118.8\n21\t21461680\t899338:1\tT\t]21:21629146]T\t59\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=899338:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_21_21609001_21634001_13C;SPAN=167466;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:20:18:5.4:59.4,5.4,0:20:0:-59.41:59.41\n21\t21578930\t899202:2\tT\tT[21:21325912[\t19\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TT;MAPQ=60;MATEID=899202:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_21_21315001_21340001_25C;SPAN=253018;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:61:19.4:19.4,0,131.6:8:4:-19.16:24.18\n21\t21629146\t899338:2\tC\tC[21:21461680[\t59\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=899338:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_21_21609001_21634001_13C;SPAN=167466;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:20:18:5.4:59.4,5.4,0:20:0:-59.41:59.41\n21\t22048768\t899423:2\tA\tA[21:21252378[\t19\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;INSERTION=T;MAPQ=60;MATEID=899423:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_21_22025501_22050501_1C;SPAN=796390;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:7:12:9.8:19.7,0,9.8:3:4:-19.89:19.89\n21\t24391796\t900120:1\tA\tA]21:24391873]\t29\tPASS\tDISC_MAPQ=255;EVDNC=TSI_L;HOMSEQ=A;MAPQ=60;MATEID=900120:2;MATENM=2;NM=0;NUMPARTS=3;REPSEQ=ATAT;SCTG=c_21_24377501_24402501_17C;SPAN=77;SUBN=1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:10:10:2.7:29.7,2.7,0:10:0:-29.71:29.71\n21\t24391873\t900120:2\tT\tT]21:24391796]\t29\tPASS\tDISC_MAPQ=255;EVDNC=TSI_L;HOMSEQ=A;MAPQ=60;MATEID=900120:1;MATENM=0;NM=2;NUMPARTS=3;REPSEQ=ATAT;SCTG=c_21_24377501_24402501_17C;SPAN=77;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:10:10:2.7:29.7,2.7,0:10:0:-29.71:29.71\n21\t26001844\t900591:1\tT\t[21:26002386[T\t99\tPASS\tDISC_MAPQ=60;EVDNC=TSI_L;HOMSEQ=GGATCCA;MAPQ=60;MATEID=900591:2;MATENM=0;NM=1;NUMPARTS=3;SCTG=c_21_25994501_26019501_0C;SPAN=542;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:35:30:9.6:105.6,9.6,0:27:25:-105.6:105.6\n21\t26002386\t900591:2\tG\t[21:26001844[G\t99\tPASS\tDISC_MAPQ=60;EVDNC=TSI_L;HOMSEQ=GGATCCA;MAPQ=60;MATEID=900591:1;MATENM=1;NM=0;NUMPARTS=3;SCTG=c_21_25994501_26019501_0C;SPAN=542;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:35:30:9.6:105.6,9.6,0:27:25:-105.6:105.6\n21\t26236436\t900686:1\tT\t]21:26285100]T\t28\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=900686:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=21:26236436(-)-21:26285100(+)__21_26264001_26289001D;SPAN=48664;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:16:8.9:28.7,0,8.9:0:10:-28.89:28.89\n21\t26285100\t900686:2\tT\tT[21:26236436[\t28\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=900686:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=21:26236436(-)-21:26285100(+)__21_26264001_26289001D;SPAN=48664;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:16:8.9:28.7,0,8.9:0:10:-28.89:28.89\n21\t31508958\t902161:1\tC\t]21:31616501]C\t25\tPASS\tDISC_MAPQ=59;EVDNC=ASDIS;INSERTION=CG;MAPQ=60;MATEID=902161:2;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_21_31605001_31630001_6C;SPAN=107543;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:15:12.2:25.4,0,12.2:7:8:-25.74:25.74\n21\t31616501\t902161:2\tG\tG[21:31508958[\t25\tPASS\tDISC_MAPQ=59;EVDNC=ASDIS;INSERTION=CG;MAPQ=60;MATEID=902161:1;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_21_31605001_31630001_6C;SPAN=107543;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:15:12.2:25.4,0,12.2:7:8:-25.74:25.74\n21\t34817147\t902939:1\tT\t]21:34863048]T\t92\tPASS\tEVDNC=ASSMB;HOMSEQ=TC;MAPQ=60;MATEID=902939:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_21_34839001_34864001_12C;SPAN=45901;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:31:21:8.4:92.4,8.4,0:31:0:-92.42:92.42\n21\t34863048\t902939:2\tC\tC[21:34817147[\t92\tPASS\tEVDNC=ASSMB;HOMSEQ=TC;MAPQ=60;MATEID=902939:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_21_34839001_34864001_12C;SPAN=45901;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:31:21:8.4:92.4,8.4,0:31:0:-92.42:92.42\n21\t38009271\t903694:2\tG\t[20:53882695[G\t85\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=G;MAPQ=60;MATEID=903694:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_21_37999501_38024501_1C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:28:22:7.8:85.8,7.8,0:14:18:-85.82:85.82\n21\t38913836\t904003:2\tA\t[6:169996908[A\t99\tPASS\tDISC_MAPQ=41;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=904003:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_21_38906001_38931001_16C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:66:51:18.3:201.3,18.3,0:61:10:-201.3:201.3\n21\t40028389\t904491:1\tT\t[21:40033586[T\t49\tPASS\tDISC_MAPQ=34;EVDNC=DSCRD;IMPRECISE;MAPQ=34;MATEID=904491:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=21:40028389(-)-21:40033586(-)__21_40033001_40058001D;SPAN=5197;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:17:23:6.8:49.7,0,6.8:0:17:-51.34:51.34\n21\t40033586\t904491:2\tT\t[21:40028389[T\t49\tPASS\tDISC_MAPQ=28;EVDNC=DSCRD;IMPRECISE;MAPQ=28;MATEID=904491:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=21:40028389(-)-21:40033586(-)__21_40033001_40058001D;SPAN=5197;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:17:23:6.8:49.7,0,6.8:0:17:-51.34:51.34\n21\t40348105\t904567:1\tA\t]21:40348511]A\t52\tPASS\tDISC_MAPQ=47;EVDNC=ASDIS;HOMSEQ=ATCAGCCACATTATTGCAATCATACCCCATACAGTTCCTATCAGCCACATTATTGCA;MAPQ=60;MATEID=904567:2;MATENM=12;NM=8;NUMPARTS=2;SCTG=c_21_40327001_40352001_0C;SPAN=406;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:22:72:52.4:52.4,0,128.3:17:5:-52.38:54.17\n21\t40348511\t904567:2\tA\tA[21:40348105[\t52\tPASS\tDISC_MAPQ=28;EVDNC=ASDIS;HOMSEQ=ATCAGCCACATTATTGCAATCATACCCCATACAGTTCCTATCAGCCACATTATTGCA;MAPQ=60;MATEID=904567:1;MATENM=8;NM=12;NUMPARTS=2;SCTG=c_21_40327001_40352001_0C;SPAN=406;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:22:72:52.4:52.4,0,128.3:17:5:-52.38:54.17\n21\t41805882\t905116:1\tC\t]21:41806838]C\t52\tPASS\tDISC_MAPQ=255;EVDNC=ASDIS;HOMSEQ=CCTCCATCACTATCATTACCCTCATCACCACCA;MAPQ=60;MATEID=905116:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_21_41797001_41822001_60C;SPAN=956;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:21:62:52.1:52.1,0,101.6:19:2:-51.89:52.86\n21\t41806838\t905116:2\tA\tA[21:41805882[\t52\tPASS\tDISC_MAPQ=49;EVDNC=ASDIS;HOMSEQ=CCTCCATCACTATCATTACCCTCATCACCACCA;MAPQ=60;MATEID=905116:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_21_41797001_41822001_60C;SPAN=956;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:21:62:52.1:52.1,0,101.6:19:2:-51.89:52.86\n21\t41930128\t905195:1\tC\tC[21:41933376[\t99\tPASS\tDISC_MAPQ=59;EVDNC=DSCRD;IMPRECISE;MAPQ=59;MATEID=905195:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=21:41930128(+)-21:41933376(-)__21_41919501_41944501D;SPAN=3248;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:61:12:16.8:184.8,16.8,0:0:61:-184.8:184.8\n21\t41933376\t905195:2\tA\t]21:41930128]A\t99\tPASS\tDISC_MAPQ=57;EVDNC=DSCRD;IMPRECISE;MAPQ=57;MATEID=905195:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=21:41930128(+)-21:41933376(-)__21_41919501_41944501D;SPAN=3248;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:61:12:16.8:184.8,16.8,0:0:61:-184.8:184.8\n21\t42994295\t905513:1\tG\t]Un_JTFH01000298v1_decoy:2143]G\t82\tPASS\tEVDNC=ASSMB;HOMSEQ=GCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCAT;MAPQ=60;MATEID=905513:2;MATENM=0;NM=1;NUMPARTS=3;SCTG=c_21_42973001_42998001_53C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:27:23:7.5:82.5,7.5,0:27:0:-82.52:82.52\n21\t44573789\t905904:1\tA\t]21:44600671]A\t19\tPASS\tDISC_MAPQ=52;EVDNC=DSCRD;IMPRECISE;MAPQ=52;MATEID=905904:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=21:44573789(-)-21:44600671(+)__21_44565501_44590501D;SPAN=26882;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:25:19.4:19.4,0,42.5:0:8:-19.38:19.89\n21\t44600671\t905904:2\tG\tG[21:44573789[\t19\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=905904:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=21:44573789(-)-21:44600671(+)__21_44565501_44590501D;SPAN=26882;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:25:19.4:19.4,0,42.5:0:8:-19.38:19.89\n21\t44817900\t906030:1\tC\t]21:45021320]C\t45\tPASS\tEVDNC=ASSMB;INSERTION=ACAGCTCCAAGGGCCGCAGGAGCGGCGCGCGGCGGCGGAGGCGCC;MAPQ=60;MATEID=906030:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_21_45006501_45031501_13C;SPAN=203420;SUBN=1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:16:25:16.1:45.8,0,16.1:16:0:-46.5:46.5\n21\t45021320\t906030:2\tG\tG[21:44817900[\t45\tPASS\tEVDNC=ASSMB;INSERTION=ACAGCTCCAAGGGCCGCAGGAGCGGCGCGCGGCGGCGGAGGCGCC;MAPQ=60;MATEID=906030:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_21_45006501_45031501_13C;SPAN=203420;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:16:25:16.1:45.8,0,16.1:16:0:-46.5:46.5\n21\t45156011\t906060:1\tC\t]21:45156432]C\t34\tPASS\tDISC_MAPQ=42;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=906060:2;MATENM=1;NM=9;NUMPARTS=2;SCTG=c_21_45153501_45178501_9C;SPAN=421;SUBN=2;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:18:8.3:34.7,0,8.3:5:10:-35.24:35.24\n21\t45156432\t906060:2\tC\tC[21:45156011[\t34\tPASS\tDISC_MAPQ=17;EVDNC=DSCRD;IMPRECISE;MAPQ=0;MATEID=906060:1;MATENM=9;NM=1;NUMPARTS=2;SCTG=c_21_45153501_45178501_9C;SPAN=421;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:18:8.3:34.7,0,8.3:5:10:-35.24:35.24\n21\t46289897\t906534:1\tG\t]21:46290060]G\t58\tPASS\tEVDNC=ASSMB;HOMSEQ=GTGTAAGGTTGTCATAGCCTTTGT;MAPQ=60;MATEID=906534:2;MATENM=4;NM=5;NUMPARTS=2;SCTG=c_21_46280501_46305501_61C;SPAN=163;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:24:74:58.4:58.4,0,127.7:24:0:-58.42:59.85\n21\t46290060\t906534:2\tT\tT[21:46289897[\t58\tPASS\tEVDNC=ASSMB;HOMSEQ=GTGTAAGGTTGTCATAGCCTTTGT;MAPQ=59;MATEID=906534:1;MATENM=5;NM=4;NUMPARTS=2;SCTG=c_21_46280501_46305501_61C;SPAN=163;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:24:74:58.4:58.4,0,127.7:24:0:-58.42:59.85\n21\t46359215\t906568:1\tA\tA[21:46359740[\t99\tPASS\tDISC_MAPQ=58;EVDNC=ASDIS;HOMSEQ=GCCTCCCAAA;MAPQ=60;MATEID=906568:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_21_46354001_46379001_3C;SPAN=525;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:44:14:12.3:135.3,12.3,0:28:29:-135.3:135.3\n21\t46359740\t906568:2\tG\t]21:46359215]G\t99\tPASS\tDISC_MAPQ=59;EVDNC=ASDIS;HOMSEQ=GCCTCCCAAA;MAPQ=60;MATEID=906568:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_21_46354001_46379001_3C;SPAN=525;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:44:14:12.3:135.3,12.3,0:28:29:-135.3:135.3\n21\t46382911\t906579:1\tT\t]21:46384131]T\t45\tPASS\tDISC_MAPQ=49;EVDNC=DSCRD;IMPRECISE;MAPQ=49;MATEID=906579:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=21:46382911(-)-21:46384131(+)__21_46378501_46403501D;SPAN=1220;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:19:62:45.5:45.5,0,108.2:0:19:-45.29:46.81\n21\t46384131\t906579:2\tC\tC[21:46382911[\t45\tPASS\tDISC_MAPQ=20;EVDNC=DSCRD;IMPRECISE;MAPQ=20;MATEID=906579:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=21:46382911(-)-21:46384131(+)__21_46378501_46403501D;SPAN=1220;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:19:62:45.5:45.5,0,108.2:0:19:-45.29:46.81\n22\t10717767\t907105:1\tT\tT[22:10722199[\t62\tPASS\tDISC_MAPQ=43;EVDNC=DSCRD;IMPRECISE;MAPQ=20;MATEID=907105:2;MATENM=10;NM=23;NUMPARTS=2;REPSEQ=GTGT;SCTG=c_22_10706501_10731501_617C;SECONDARY;SPAN=4432;SUBN=1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:26:82:62.9:62.9,0,142.1:13:13:-62.78:64.53\n22\t10722199\t907105:2\tT\t]22:10717767]T\t62\tPASS\tDISC_MAPQ=38;EVDNC=DSCRD;IMPRECISE;MAPQ=0;MATEID=907105:1;MATENM=23;NM=10;NUMPARTS=2;REPSEQ=GTGT;SCTG=c_22_10706501_10731501_617C;SECONDARY;SPAN=4432;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:26:82:62.9:62.9,0,142.1:13:13:-62.78:64.53\n22\t10726871\t907286:1\tA\tA[22:10728283[\t76\tPASS\tEVDNC=ASSMB;HOMSEQ=ATTCCATTCCATTCGA;MAPQ=60;MATEID=907286:2;MATENM=7;NM=2;NUMPARTS=2;SCTG=c_22_10706501_10731501_274C;SPAN=1412;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:29:70:76.1:76.1,0,99.2:29:0:-76.05:76.24\n22\t10728262\t907316:1\tC\tC[22:10729335[\t29\tPASS\tDISC_MAPQ=50;EVDNC=DSCRD;IMPRECISE;MAPQ=50;MATEID=907316:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=22:10728262(+)-22:10729335(-)__22_10706501_10731501D;SPAN=1073;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:17:96:29.3:29.3,0,210.8:0:17:-29.13:37.22\n22\t10728283\t907286:2\tA\t]22:10726871]A\t76\tPASS\tEVDNC=ASSMB;HOMSEQ=ATTCCATTCCATTCGA;MAPQ=60;MATEID=907286:1;MATENM=2;NM=7;NUMPARTS=2;SCTG=c_22_10706501_10731501_274C;SPAN=1412;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:29:70:76.1:76.1,0,99.2:29:0:-76.05:76.24\n22\t10729335\t907316:2\tT\t]22:10728262]T\t29\tPASS\tDISC_MAPQ=29;EVDNC=DSCRD;IMPRECISE;MAPQ=29;MATEID=907316:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=22:10728262(+)-22:10729335(-)__22_10706501_10731501D;SPAN=1073;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:17:96:29.3:29.3,0,210.8:0:17:-29.13:37.22\n22\t10739861\t907396:2\tC\t]10:125894203]C\t44\tPASS\tDISC_MAPQ=48;EVDNC=DSCRD;IMPRECISE;MAPQ=48;MATEID=907396:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=10:125894203(+)-22:10739861(-)__22_10731001_10756001D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:20:75:44.9:44.9,0,143.9:0:20:-44.94:47.83\n22\t10740444\t907451:1\tA\tA[22:10746352[\t32\tPASS\tDISC_MAPQ=15;EVDNC=DSCRD;IMPRECISE;MAPQ=15;MATEID=907451:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=22:10740444(+)-22:10746352(-)__22_10731001_10756001D;SPAN=5908;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:51:32:32,0,94.7:0:14:-31.88:33.69\n22\t10741540\t907397:2\tG\tG[10:125895950[\t25\tPASS\tDISC_MAPQ=49;EVDNC=DSCRD;IMPRECISE;MAPQ=49;MATEID=907397:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=10:125895950(-)-22:10741540(+)__22_10731001_10756001D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:16:12.2:25.4,0,12.2:0:9:-25.35:25.35\n22\t10746352\t907451:2\tG\t]22:10740444]G\t32\tPASS\tDISC_MAPQ=16;EVDNC=DSCRD;IMPRECISE;MAPQ=16;MATEID=907451:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=22:10740444(+)-22:10746352(-)__22_10731001_10756001D;SPAN=5908;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:51:32:32,0,94.7:0:14:-31.88:33.69\n22\t11031172\t907897:1\tG\tG[22:11032168[\t79\tPASS\tEVDNC=ASSMB;INSERTION=CCACAA;MAPQ=60;MATEID=907897:2;MATENM=3;NM=1;NUMPARTS=2;SCTG=c_22_11025001_11050001_283C;SPAN=996;SUBN=1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:30:71:79.1:79.1,0,98.9:30:0:-79.07:79.2\n22\t11032168\t907897:2\tA\t]22:11031172]A\t79\tPASS\tEVDNC=ASSMB;INSERTION=CCACAA;MAPQ=60;MATEID=907897:1;MATENM=1;NM=3;NUMPARTS=2;SCTG=c_22_11025001_11050001_283C;SPAN=996;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:30:71:79.1:79.1,0,98.9:30:0:-79.07:79.2\n22\t11317848\t949339:1\tT\t[Y:10134946[T\t66\tPASS\tDISC_MAPQ=255;EVDNC=ASDIS;HOMSEQ=GAAACTAAAAGATTTTTAATATATAAGGTTATGTCATCTGCAAACAGATA;MAPQ=45;MATEID=949339:2;MATENM=4;NM=2;NUMPARTS=2;SCTG=c_24_10118501_10143501_145C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:22:8:6:66,6,0:15:7:-66.02:66.02\n22\t11373695\t908592:2\tG\tG[20:29851924[\t61\tPASS\tDISC_MAPQ=51;EVDNC=ASDIS;HOMSEQ=GAGCAGTTTTGAAACACTCTTTTTGTAGAATCTGCAAGTGGATATTTGGAG;MAPQ=60;MATEID=908592:1;MATENM=6;NM=1;NUMPARTS=2;SCTG=c_22_11368001_11393001_16C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:22:41:41.3:61.1,0,41.3:9:14:-61.28:61.28\n22\t12698698\t910274:1\tA\tA[22:12699025[\t70\tPASS\tDISC_MAPQ=40;EVDNC=ASDIS;HOMSEQ=AAAAGAATAA;MAPQ=60;MATEID=910274:2;MATENM=9;NM=4;NUMPARTS=2;SCTG=c_22_12691001_12716001_689C;SPAN=327;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:29:91:70.4:70.4,0,156.2:14:15:-70.15:72.05\n22\t12699025\t910274:2\tA\t]22:12698698]A\t70\tPASS\tDISC_MAPQ=36;EVDNC=ASDIS;HOMSEQ=AAAAGAATAA;MAPQ=60;MATEID=910274:1;MATENM=4;NM=9;NUMPARTS=2;SCTG=c_22_12691001_12716001_689C;SPAN=327;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:29:91:70.4:70.4,0,156.2:14:15:-70.15:72.05\n22\t16034697\t910884:1\tA\t]22:16034865]A\t48\tPASS\tEVDNC=ASSMB;INSERTION=T;MAPQ=60;MATEID=910884:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_22_16023001_16048001_164C;SPAN=168;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:18:38:45.5:48.8,0,45.5:18:0:-48.74:48.74\n22\t16034865\t910884:2\tA\tA[22:16034697[\t48\tPASS\tEVDNC=ASSMB;INSERTION=T;MAPQ=60;MATEID=910884:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_22_16023001_16048001_164C;SPAN=168;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:18:38:45.5:48.8,0,45.5:18:0:-48.74:48.74\n22\t16080720\t911037:1\tT\tT[22:16084271[\t46\tPASS\tDISC_MAPQ=31;EVDNC=DSCRD;IMPRECISE;MAPQ=31;MATEID=911037:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=22:16080720(+)-22:16084271(-)__22_16072001_16097001D;SPAN=3551;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:15:14:4.2:46.2,4.2,0:0:15:-46.21:46.21\n22\t16084271\t911037:2\tG\t]22:16080720]G\t46\tPASS\tDISC_MAPQ=49;EVDNC=DSCRD;IMPRECISE;MAPQ=49;MATEID=911037:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=22:16080720(+)-22:16084271(-)__22_16072001_16097001D;SPAN=3551;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:15:14:4.2:46.2,4.2,0:0:15:-46.21:46.21\n22\t17289460\t912428:1\tC\tC[22:17298219[\t59\tPASS\tEVDNC=ASSMB;INSERTION=C;MAPQ=60;MATEID=912428:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_22_17297001_17322001_39C;SPAN=8759;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:20:10:5.4:59.4,5.4,0:20:0:-59.41:59.41\n22\t17298219\t912428:2\tC\t]22:17289460]C\t59\tPASS\tEVDNC=ASSMB;INSERTION=C;MAPQ=60;MATEID=912428:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_22_17297001_17322001_39C;SPAN=8759;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:20:10:5.4:59.4,5.4,0:20:0:-59.41:59.41\n22\t17801149\t912594:1\tT\tT[22:17801453[\t15\tPASS\tEVDNC=ASSMB;HOMSEQ=TCCTGAGTTTCCTTTTTCT;MAPQ=60;MATEID=912594:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_22_17787001_17812001_113C;SPAN=304;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:6:17:15.2:15.2,0,25.1:6:0:-15.03:15.24\n22\t17801453\t912594:2\tT\t]22:17801149]T\t15\tPASS\tEVDNC=ASSMB;HOMSEQ=TCCTGAGTTTCCTTTTTCT;MAPQ=60;MATEID=912594:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_22_17787001_17812001_113C;SPAN=304;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:6:17:15.2:15.2,0,25.1:6:0:-15.03:15.24\n22\t18036248\t912659:1\tT\t]22:18077776]T\t42\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;INSERTION=CCCCTCCATTAACATTAACAT;MAPQ=60;MATEID=912659:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_22_18056501_18081501_85C;SPAN=41528;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:14:13:3.9:42.9,3.9,0:10:9:-42.91:42.91\n22\t18077776\t912659:2\tA\tA[22:18036248[\t42\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;INSERTION=CCCCTCCATTAACATTAACAT;MAPQ=60;MATEID=912659:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_22_18056501_18081501_85C;SPAN=41528;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:14:13:3.9:42.9,3.9,0:10:9:-42.91:42.91\n22\t19584096\t913224:1\tC\tC[22:19585579[\t92\tPASS\tEVDNC=ASSMB;HOMSEQ=C;MAPQ=52;MATEID=913224:2;MATENM=3;NM=0;NUMPARTS=2;SCTG=c_22_19575501_19600501_112C;SPAN=1483;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:31:11:8.4:92.4,8.4,0:31:0:-92.42:92.42\n22\t19585579\t913224:2\tC\t]22:19584096]C\t92\tPASS\tEVDNC=ASSMB;HOMSEQ=C;MAPQ=60;MATEID=913224:1;MATENM=0;NM=3;NUMPARTS=2;SCTG=c_22_19575501_19600501_112C;SPAN=1483;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:31:11:8.4:92.4,8.4,0:31:0:-92.42:92.42\n22\t20075143\t913386:1\tG\t]22:20075626]G\t23\tPASS\tDISC_MAPQ=49;EVDNC=DSCRD;IMPRECISE;MAPQ=49;MATEID=913386:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=22:20075143(-)-22:20075626(+)__22_20065501_20090501D;SPAN=483;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:24:23:23,0,36.2:0:9:-22.96:23.15\n22\t20075626\t913386:2\tG\tG[22:20075143[\t23\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=913386:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=22:20075143(-)-22:20075626(+)__22_20065501_20090501D;SPAN=483;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:24:23:23,0,36.2:0:9:-22.96:23.15\n22\t22352809\t914312:1\tT\t]22:22375955]T\t28\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=914312:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=22:22352809(-)-22:22375955(+)__22_22368501_22393501D;SPAN=23146;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:18:14.9:28.1,0,14.9:0:10:-28.08:28.08\n22\t22375955\t914312:2\tA\tA[22:22352809[\t28\tPASS\tDISC_MAPQ=59;EVDNC=DSCRD;IMPRECISE;MAPQ=59;MATEID=914312:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=22:22352809(-)-22:22375955(+)__22_22368501_22393501D;SPAN=23146;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:18:14.9:28.1,0,14.9:0:10:-28.08:28.08\n22\t23429471\t914635:2\tC\t[7:1876939[C\t26\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=914635:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:1876939(-)-22:23429471(-)__22_23422001_23447001D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:23:26.6:26.6,0,29.9:0:10:-26.55:26.57\n22\t23558690\t914724:1\tA\tA[22:23561043[\t24\tPASS\tDISC_MAPQ=53;EVDNC=DSCRD;IMPRECISE;MAPQ=53;MATEID=914724:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=22:23558690(+)-22:23561043(-)__22_23544501_23569501D;SPAN=2353;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:20:24.2:24.2,0,24.2:0:9:-24.09:24.09\n22\t23561043\t914724:2\tA\t]22:23558690]A\t24\tPASS\tDISC_MAPQ=21;EVDNC=DSCRD;IMPRECISE;MAPQ=21;MATEID=914724:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=22:23558690(+)-22:23561043(-)__22_23544501_23569501D;SPAN=2353;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:20:24.2:24.2,0,24.2:0:9:-24.09:24.09\n22\t23683431\t914791:1\tG\tG[22:23685352[\t37\tPASS\tEVDNC=ASSMB;HOMSEQ=G;MAPQ=60;MATEID=914791:2;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_22_23667001_23692001_69C;SPAN=1921;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:20:11:37.4,0,11:13:0:-37.93:37.93\n22\t23685352\t914791:2\tG\t]22:23683431]G\t37\tPASS\tEVDNC=ASSMB;HOMSEQ=G;MAPQ=60;MATEID=914791:1;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_22_23667001_23692001_69C;SPAN=1921;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:20:11:37.4,0,11:13:0:-37.93:37.93\n22\t23853676\t914841:2\tT\t[2:47582850[T\t47\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TA;MAPQ=60;MATEID=914841:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_22_23838501_23863501_79C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:16:20:1.1:47.3,0,1.1:15:2:-49.48:49.48\n22\t23853754\t914857:1\tA\tA[22:23856319[\t61\tPASS\tEVDNC=ASSMB;HOMSEQ=GAAAAAAA;MAPQ=60;MATEID=914857:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_22_23838501_23863501_51C;SPAN=2565;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:21:29:11.6:61.1,0,11.6:21:0:-63.06:63.06\n22\t23856319\t914857:2\tG\t]22:23853754]G\t61\tPASS\tEVDNC=ASSMB;HOMSEQ=GAAAAAAA;MAPQ=60;MATEID=914857:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_22_23838501_23863501_51C;SPAN=2565;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:21:29:11.6:61.1,0,11.6:21:0:-63.06:63.06\n22\t23931957\t914955:1\tA\tA[22:23969109[\t52\tPASS\tEVDNC=ASSMB;HOMSEQ=CA;MAPQ=60;MATEID=914955:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_22_23961001_23986001_4C;SPAN=37152;SUBN=2;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:18:12:4.8:52.8,4.8,0:18:0:-52.81:52.81\n22\t23969109\t914955:2\tC\t]22:23931957]C\t52\tPASS\tEVDNC=ASSMB;HOMSEQ=CA;MAPQ=60;MATEID=914955:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_22_23961001_23986001_4C;SPAN=37152;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:18:12:4.8:52.8,4.8,0:18:0:-52.81:52.81\n22\t25006973\t915214:1\tC\tC[22:25007371[\t28\tPASS\tEVDNC=ASSMB;INSERTION=AGGTTTTCGGGATT;MAPQ=60;MATEID=915214:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_22_24990001_25015001_32C;SPAN=398;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:18:14.9:28.1,0,14.9:10:0:-28.08:28.08\n22\t25007371\t915214:2\tA\t]22:25006973]A\t28\tPASS\tEVDNC=ASSMB;INSERTION=AGGTTTTCGGGATT;MAPQ=60;MATEID=915214:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_22_24990001_25015001_32C;SPAN=398;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:18:14.9:28.1,0,14.9:10:0:-28.08:28.08\n22\t25178400\t915247:2\tT\t]20:63640433]T\t33\tPASS\tDISC_MAPQ=50;EVDNC=DSCRD;IMPRECISE;MAPQ=50;MATEID=915247:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=20:63640433(+)-22:25178400(-)__22_25161501_25186501D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:11:10:3:33,3,0:0:11:-33.01:33.01\n22\t26772113\t915762:1\tT\tT[22:26773830[\t21\tPASS\tEVDNC=ASSMB;HOMSEQ=CTTAACCTCT;MAPQ=60;MATEID=915762:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_22_26754001_26779001_71C;SPAN=1717;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:29:21.5:21.5,0,51.2:9:0:-21.56:22.23\n22\t26773830\t915762:2\tC\t]22:26772113]C\t21\tPASS\tEVDNC=ASSMB;HOMSEQ=CTTAACCTCT;MAPQ=60;MATEID=915762:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_22_26754001_26779001_71C;SPAN=1717;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:29:21.5:21.5,0,51.2:9:0:-21.56:22.23\n22\t28669436\t916262:2\tT\tT[3:176189690[\t6\tPASS\tEVDNC=ASSMB;HOMSEQ=C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1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:16:10:4.2:46.2,4.2,0:11:9:-46.21:46.21\n22\t32179925\t917274:2\tG\t]9:98715302]G\t62\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;INSERTION=GCATGGTGAGTCT;MAPQ=60;MATEID=917274:1;MATENM=35;NM=2;NUMPARTS=2;SCTG=c_22_32168501_32193501_27C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:21:10:5.7:62.7,5.7,0:19:7:-62.72:62.72\n22\t32899786\t917609:1\tC\tC[22:32900091[\t52\tPASS\tEVDNC=ASSMB;HOMSEQ=AAAACAAGGAAGTC;MAPQ=60;MATEID=917609:2;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_22_32879001_32904001_118C;SPAN=305;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:17:18:4.8:52.8,4.8,0:17:0:-52.81:52.81\n22\t32900091\t917609:2\tA\t]22:32899786]A\t52\tPASS\tEVDNC=ASSMB;HOMSEQ=AAAACAAGGAAGTC;MAPQ=60;MATEID=917609:1;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_22_32879001_32904001_118C;SPAN=305;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:17:18:4.8:52.8,4.8,0:17:0:-52.81:52.81\n22\t34322060\t918200:1\tA\t[22:34474116[A\t56\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TCT;MAPQ=60;MATEID=918200:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_22_34471501_34496501_71C;SPAN=152056;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:18:19:5.1:56.1,5.1,0:16:7:-56.11:56.11\n22\t34474116\t918200:2\tT\t[22:34322060[T\t56\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TCT;MAPQ=60;MATEID=918200:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_22_34471501_34496501_71C;SPAN=152056;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:18:19:5.1:56.1,5.1,0:16:7:-56.11:56.11\n22\t34476818\t918199:2\tT\tT[2:240614048[\t25\tPASS\tEVDNC=ASSMB;HOMSEQ=CT;MAPQ=60;MATEID=918199:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_22_34471501_34496501_39C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:17:15.2:25.1,0,15.2:9:0:-24.99:24.99\n22\t34664447\t918283:1\tA\tA[22:34665282[\t44\tPASS\tEVDNC=ASSMB;HOMSEQ=AA;MAPQ=60;MATEID=918283:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_22_34643001_34668001_90C;SPAN=835;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:16:28:25.1:44.9,0,25.1:16:0:-45.23:45.23\n22\t34665282\t918283:2\tA\t]22:34664447]A\t44\tPASS\tEVDNC=ASSMB;HOMSEQ=AA;MAPQ=60;MATEID=918283:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_22_34643001_34668001_90C;SPAN=835;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:16:28:25.1:44.9,0,25.1:16:0:-45.23:45.23\n22\t35063008\t918417:1\tG\tG[22:35063429[\t52\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;INSERTION=AATGGGGGC;MAPQ=60;MATEID=918417:2;MATENM=0;NM=5;NUMPARTS=2;SCTG=c_22_35059501_35084501_25C;SPAN=421;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:16:18:4.8:52.8,4.8,0:9:11:-51.41:51.41\n22\t35063429\t918417:2\tA\t]22:35063008]A\t52\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;INSERTION=AATGGGGGC;MAPQ=60;MATEID=918417:1;MATENM=5;NM=0;NUMPARTS=2;SCTG=c_22_35059501_35084501_25C;SPAN=421;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:16:18:4.8:52.8,4.8,0:9:11:-51.41:51.41\n22\t35249223\t918484:1\tT\tT[22:35250146[\t46\tPASS\tDISC_MAPQ=58;EVDNC=DSCRD;IMPRECISE;MAPQ=58;MATEID=918484:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=22:35249223(+)-22:35250146(-)__22_35231001_35256001D;SPAN=923;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:16:3:4.2:46.2,4.2,0:0:16:-46.21:46.21\n22\t35250146\t918484:2\tC\t]22:35249223]C\t46\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=918484:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=22:35249223(+)-22:35250146(-)__22_35231001_35256001D;SPAN=923;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:16:3:4.2:46.2,4.2,0:0:16:-46.21:46.21\n22\t36533059\t918828:1\tT\t[22:36538235[T\t34\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TA;MAPQ=60;MATEID=918828:2;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_22_36529501_36554501_31C;SPAN=5176;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:20:14.3:34.1,0,14.3:8:5:-34.32:34.32\n22\t36538235\t918828:2\tT\t[22:36533059[T\t34\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TA;MAPQ=60;MATEID=918828:1;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_22_36529501_36554501_31C;SPAN=5176;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:20:14.3:34.1,0,14.3:8:5:-34.32:34.32\n22\t36747132\t918917:1\tT\tT[22:36751852[\t23\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AGTAGCT;MAPQ=60;MATEID=918917:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_22_36750001_36775001_21C;SPAN=4720;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:8:4:2.1:23.1,2.1,0:5:6:-23.11:23.11\n22\t36751852\t918917:2\tA\t]22:36747132]A\t23\tPASS\tDISC_MAPQ=53;EVDNC=ASDIS;HOMSEQ=AGTAGCT;MAPQ=60;MATEID=918917:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_22_36750001_36775001_21C;SPAN=4720;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:8:4:2.1:23.1,2.1,0:5:6:-23.11:23.11\n22\t37015985\t919060:1\tC\t]22:37190824]C\t42\tPASS\tEVDNC=ASSMB;HOMSEQ=CCA;MAPQ=60;MATEID=919060:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_22_37166501_37191501_89C;SPAN=174839;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:14:12:3.9:42.9,3.9,0:14:0:-42.91:42.91\n22\t37190824\t919060:2\tA\tA[22:37015985[\t42\tPASS\tEVDNC=ASSMB;HOMSEQ=CCA;MAPQ=60;MATEID=919060:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_22_37166501_37191501_89C;SPAN=174839;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:14:12:3.9:42.9,3.9,0:14:0:-42.91:42.91\n22\t42705458\t920298:1\tC\tC[22:42706193[\t42\tPASS\tDISC_MAPQ=55;EVDNC=ASDIS;HOMSEQ=AAAATACAAAAAATTAGC;MAPQ=60;MATEID=920298:2;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_22_42703501_42728501_40C;SPAN=735;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:14:4:3.9:42.9,3.9,0:2:13:-42.91:42.91\n22\t42706193\t920298:2\tA\t]22:42705458]A\t42\tPASS\tDISC_MAPQ=51;EVDNC=ASDIS;HOMSEQ=AAAATACAAAAAATTAGC;MAPQ=60;MATEID=920298:1;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_22_42703501_42728501_40C;SPAN=735;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:14:4:3.9:42.9,3.9,0:2:13:-42.91:42.91\n22\t44904504\t920968:1\tG\tG[22:44904876[\t38\tPASS\tEVDNC=ASSMB;INSERTION=GGTATAAAATACTGAGTTGGCAGTG;MAPQ=60;MATEID=920968:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_22_44884001_44909001_62C;SPAN=372;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:17:2:38.3,0,2:13:0:-39.65:39.65\n22\t44904876\t920968:2\tA\t]22:44904504]A\t38\tPASS\tEVDNC=ASSMB;INSERTION=GGTATAAAATACTGAGTTGGCAGTG;MAPQ=60;MATEID=920968:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_22_44884001_44909001_62C;SPAN=372;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:17:2:38.3,0,2:13:0:-39.65:39.65\n22\t45349456\t921146:1\tC\tC[22:45350365[\t33\tPASS\tEVDNC=ASSMB;HOMSEQ=CCTCCCGGGTTCAAGTGATTCTCCTGCCTCAGC;MAPQ=60;MATEID=921146:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_22_45325001_45350001_48C;SPAN=909;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:11:3:3:33,3,0:11:0:-33.01:33.01\n22\t45349559\t921149:1\tC\t]22:45350566]C\t56\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=CTCCTGACCTTGTGATCTGCCTGCCTCGGCCTCCCATAGTGCTGGGATTACAGGCGTGAGCCACCG;MAPQ=60;MATEID=921149:2;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_22_45349501_45374501_67C;SPAN=1007;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:19:13:5.1:56.1,5.1,0:14:8:-56.11:56.11\n22\t45350365\t921146:2\tC\t]22:45349456]C\t33\tPASS\tEVDNC=ASSMB;HOMSEQ=CCTCCCGGGTTCAAGTGATTCTCCTGCCTCAGC;MAPQ=60;MATEID=921146:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_22_45325001_45350001_48C;SPAN=909;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:11:3:3:33,3,0:11:0:-33.01:33.01\n22\t45350566\t921149:2\tG\tG[22:45349559[\t56\tPASS\tDISC_MAPQ=34;EVDNC=ASDIS;HOMSEQ=CTCCTGACCTTGTGATCTGCCTGCCTCGGCCTCCCATAGTGCTGGGATTACAGGCGTGAGCCACCG;MAPQ=60;MATEID=921149:1;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_22_45349501_45374501_67C;SPAN=1007;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:19:13:5.1:56.1,5.1,0:14:8:-56.11:56.11\n22\t45479153\t921203:1\tT\tT[22:45479470[\t22\tPASS\tEVDNC=ASSMB;HOMSEQ=TATTATAAATTTTT;MAPQ=60;MATEID=921203:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_22_45472001_45497001_108C;SPAN=317;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:26:22.4:22.4,0,42.2:9:0:-22.4:22.76\n22\t45479470\t921203:2\tT\t]22:45479153]T\t22\tPASS\tEVDNC=ASSMB;HOMSEQ=TATTATAAATTTTT;MAPQ=60;MATEID=921203:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_22_45472001_45497001_108C;SPAN=317;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:26:22.4:22.4,0,42.2:9:0:-22.4:22.76\n22\t45595928\t895070:2\tG\tG[21:10489827[\t35\tPASS\tDISC_MAPQ=54;EVDNC=DSCRD;IMPRECISE;MAPQ=54;MATEID=895070:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=21:10489827(-)-22:45595928(+)__21_10486001_10511001D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:26:29:35.6,0,29:0:13:-35.63:35.63\n22\t46026671\t921353:1\tC\t]22:46027582]C\t15\tPASS\tEVDNC=ASSMB;HOMSEQ=C;MAPQ=60;MATEID=921353:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_22_46011001_46036001_9C;SPAN=911;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:7:28:15.2:15.2,0,54.8:7:0:-15.24:16.51\n22\t46027582\t921353:2\tC\tC[22:46026671[\t15\tPASS\tEVDNC=ASSMB;HOMSEQ=C;MAPQ=60;MATEID=921353:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_22_46011001_46036001_9C;SPAN=911;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:7:28:15.2:15.2,0,54.8:7:0:-15.24:16.51\n22\t47300719\t921635:1\tG\tG[22:47301110[\t42\tPASS\tEVDNC=ASSMB;HOMSEQ=AGGAAG;MAPQ=60;MATEID=921635:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_22_47285001_47310001_39C;SPAN=391;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:14:14:3.9:42.9,3.9,0:14:0:-42.91:42.91\n22\t47301110\t921635:2\tA\t]22:47300719]A\t42\tPASS\tEVDNC=ASSMB;HOMSEQ=AGGAAG;MAPQ=60;MATEID=921635:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_22_47285001_47310001_39C;SPAN=391;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:14:14:3.9:42.9,3.9,0:14:0:-42.91:42.91\n22\t47386239\t921681:1\tT\tT[22:47386455[\t19\tPASS\tEVDNC=ASSMB;INSERTION=TGTAG;MAPQ=60;MATEID=921681:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_22_47383001_47408001_54C;SPAN=216;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:7:14:15.8:19.1,0,15.8:7:0:-19.19:19.19\n22\t47386455\t921681:2\tC\t]22:47386239]C\t19\tPASS\tEVDNC=ASSMB;INSERTION=TGTAG;MAPQ=60;MATEID=921681:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_22_47383001_47408001_54C;SPAN=216;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:7:14:15.8:19.1,0,15.8:7:0:-19.19:19.19\n22\t49029656\t922294:2\tT\tT[2:85486995[\t26\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;INSERTION=G;MAPQ=60;MATEID=922294:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_22_49024501_49049501_90C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:9:7:2.4:26.4,2.4,0:7:4:-26.41:26.41\n22\t49205551\t922378:1\tA\t]22:49205666]A\t17\tPASS\tEVDNC=ASSMB;HOMSEQ=ACCTCCAT;MAPQ=60;MATEID=922378:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_22_49196001_49221001_12C;SPAN=115;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:7:20:17.6:17.6,0,30.8:7:0:-17.49:17.74\n22\t49205666\t922378:2\tT\tT[22:49205551[\t17\tPASS\tEVDNC=ASSMB;HOMSEQ=ACCTCCAT;MAPQ=60;MATEID=922378:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_22_49196001_49221001_12C;SPAN=115;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:7:20:17.6:17.6,0,30.8:7:0:-17.49:17.74\n22\t49226612\t922392:1\tC\t]22:49228522]C\t21\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=922392:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=22:49226612(-)-22:49228522(+)__22_49220501_49245501D;SPAN=1910;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:18:21.5:21.5,0,21.5:0:8:-21.35:21.36\n22\t49228522\t922392:2\tG\tG[22:49226612[\t21\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=922392:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=22:49226612(-)-22:49228522(+)__22_49220501_49245501D;SPAN=1910;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:18:21.5:21.5,0,21.5:0:8:-21.35:21.36\nX\t522245\t923061:1\tT\t]X:522610]T\t5\tPASS\tDISC_MAPQ=11;EVDNC=TSI_L;HOMSEQ=TTTCTTTCTTTCTCTTTCTTTCTTTT;MAPQ=53;MATEID=923061:2;MATENM=52;NM=0;NUMPARTS=4;REPSEQ=TTCTTTCTTTCT;SCTG=c_23_514501_539501_70C;SPAN=365;SUBN=2;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:28:5:5,0,16:5:5:-4.711:5.41\nX\t522610\t923061:2\tT\tT[X:522245[\t5\tPASS\tDISC_MAPQ=14;EVDNC=TSI_L;HOMSEQ=TTTCTTTCTTTCTCTTTCTTTCTTTT;MAPQ=36;MATEID=923061:1;MATENM=0;NM=52;NUMPARTS=4;REPSEQ=TTCTTTCTTTCT;SCTG=c_23_514501_539501_70C;SPAN=365;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:28:5:5,0,16:5:5:-4.711:5.41\nX\t700223\t923242:1\tC\tC[X:700508[\t6\tPASS\tEVDNC=ASSMB;HOMSEQ=GGCCTCCCAAAGTGCTGGGATGACAGGC;MAPQ=60;MATEID=923242:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_23_686001_711001_13C;SPAN=285;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:4:24:6.5:6.5,0,52.7:4:0:-6.458:8.642\nX\t700508\t923242:2\tG\t]X:700223]G\t6\tPASS\tEVDNC=ASSMB;HOMSEQ=GGCCTCCCAAAGTGCTGGGATGACAGGC;MAPQ=60;MATEID=923242:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_23_686001_711001_13C;SPAN=285;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:4:24:6.5:6.5,0,52.7:4:0:-6.458:8.642\nX\t1083702\t923494:1\tC\tC[X:1084699[\t52\tPASS\tDISC_MAPQ=57;EVDNC=DSCRD;IMPRECISE;MAPQ=57;MATEID=923494:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=23:1083702(+)-23:1084699(-)__23_1078001_1103001D;SPAN=997;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:18:2:4.8:52.8,4.8,0:0:18:-52.81:52.81\nX\t1084699\t923494:2\tA\t]X:1083702]A\t52\tPASS\tDISC_MAPQ=57;EVDNC=DSCRD;IMPRECISE;MAPQ=57;MATEID=923494:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=23:1083702(+)-23:1084699(-)__23_1078001_1103001D;SPAN=997;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:18:2:4.8:52.8,4.8,0:0:18:-52.81:52.81\nX\t2277183\t924095:1\tG\tG[X:2282290[\t26\tPASS\tDISC_MAPQ=42;EVDNC=DSCRD;IMPRECISE;MAPQ=42;MATEID=924095:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=23:2277183(+)-23:2282290(-)__23_2278501_2303501D;SPAN=5107;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:9:3:2.4:26.4,2.4,0:0:9:-26.41:26.41\nX\t2282290\t924095:2\tA\t]X:2277183]A\t26\tPASS\tDISC_MAPQ=53;EVDNC=DSCRD;IMPRECISE;MAPQ=53;MATEID=924095:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=23:2277183(+)-23:2282290(-)__23_2278501_2303501D;SPAN=5107;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:9:3:2.4:26.4,2.4,0:0:9:-26.41:26.41\nX\t5047637\t924954:1\tT\tT[Un_KN707734v1_decoy:1[\t46\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=924954:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_23_5047001_5072001_7C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:15:4:4.2:46.2,4.2,0:15:0:-46.21:46.21\nX\t5137385\t924998:1\tG\tG[X:5139458[\t46\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=924998:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=23:5137385(+)-23:5139458(-)__23_5120501_5145501D;SPAN=2073;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:15:3:4.2:46.2,4.2,0:0:15:-46.21:46.21\nX\t5139458\t924998:2\tA\t]X:5137385]A\t46\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=924998:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=23:5137385(+)-23:5139458(-)__23_5120501_5145501D;SPAN=2073;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:15:3:4.2:46.2,4.2,0:0:15:-46.21:46.21\nX\t5811084\t925207:1\tG\t[X:5812566[G\t60\tPASS\tEVDNC=ASSMB;HOMSEQ=GTGGA;MAPQ=60;MATEID=925207:2;MATENM=0;NM=7;NUMPARTS=2;SCTG=c_23_5806501_5831501_11C;SPAN=1482;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:21:32:17.6:60.5,0,17.6:21:0:-61.42:61.42\nX\t5811085\t925208:1\tT\tT]X:5812751]\t79\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=T;MAPQ=60;MATEID=925208:2;MATENM=0;NM=14;NUMPARTS=2;SCTG=c_23_5806501_5831501_4C;SPAN=1666;SUBN=1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:24:26:7.2:79.2,7.2,0:20:5:-78.56:78.56\nX\t5812566\t925207:2\tT\t[X:5811084[T\t60\tPASS\tEVDNC=ASSMB;HOMSEQ=GTGGA;MAPQ=60;MATEID=925207:1;MATENM=7;NM=0;NUMPARTS=2;SCTG=c_23_5806501_5831501_11C;SPAN=1482;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:21:32:17.6:60.5,0,17.6:21:0:-61.42:61.42\nX\t5812751\t925208:2\tA\tA]X:5811085]\t79\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=T;MAPQ=60;MATEID=925208:1;MATENM=14;NM=0;NUMPARTS=2;SCTG=c_23_5806501_5831501_4C;SPAN=1666;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:24:26:7.2:79.2,7.2,0:20:5:-78.56:78.56\nX\t7232716\t925458:1\tA\t]X:7238469]A\t23\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=925458:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_23_7227501_725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:1;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_23_46819501_46844501_18C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:10:10:2.7:29.7,2.7,0:3:7:-29.71:29.71\nX\t48232327\t931311:1\tT\tT[X:48233548[\t18\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=931311:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=23:48232327(+)-23:48233548(-)__23_48216001_48241001D;SPAN=1221;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:51:18.8:18.8,0,107.9:0:10:-18.67:22.39\nX\t48233548\t931311:2\tC\t]X:48232327]C\t18\tPASS\tDISC_MAPQ=43;EVDNC=DSCRD;IMPRECISE;MAPQ=43;MATEID=931311:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=23:48232327(+)-23:48233548(-)__23_48216001_48241001D;SPAN=1221;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:51:18.8:18.8,0,107.9:0:10:-18.67:22.39\nX\t49017568\t931447:1\tG\t]X:49018696]G\t52\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=GGGATTACAGGCGTGAGCCAC;MAPQ=60;MATEID=931447:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_23_49000001_49025001_18C;SPAN=1128;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:17:18:4.8:52.8,4.8,0:12:8:-52.81:52.81\nX\t49018696\t931447:2\tC\tC[X:49017568[\t52\tPASS\tDISC_MAPQ=58;EVDNC=ASDIS;HOMSEQ=GGGATTACAGGCGTGAGCCAC;MAPQ=60;MATEID=931447:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_23_49000001_49025001_18C;SPAN=1128;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:17:18:4.8:52.8,4.8,0:12:8:-52.81:52.81\nX\t49069209\t931464:1\tT\t]X:49069329]T\t41\tPASS\tEVDNC=ASSMB;HOMSEQ=TGCCT;MAPQ=60;MATEID=931464:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_23_49049001_49074001_17C;SPAN=120;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:15:27:25.4:41.9,0,25.4:15:0:-42.12:42.12\nX\t49069329\t931464:2\tT\tT[X:49069209[\t41\tPASS\tEVDNC=ASSMB;HOMSEQ=TGCCT;MAPQ=60;MATEID=931464:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_23_49049001_49074001_17C;SPAN=120;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:15:27:25.4:41.9,0,25.4:15:0:-42.12:42.12\nX\t49142499\t807511:2\tA\tA]17:52598606]\t29\tPASS\tDISC_MAPQ=23;EVDNC=DSCRD;IMPRECISE;MAPQ=23;MATEID=807511:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=17:52598606(+)-23:49142499(+)__17_52577001_52602001D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:25:29.3:29.3,0,32.6:0:11:-29.28:29.3\nX\t52857692\t988228:1\tT\t]X:55652526]T\t39\tPASS\tDISC_MAPQ=255;EVDNC=TSI_L;HOMSEQ=ACTTTATAA;INSERTION=TGTAAAGCTGTAAAATTTTAAGTGGGAGCATCATAAGTCAGGGGCATCTGTATTCTCTCTGTTGGACTTTGGTATCCAGGTTACACTATCTTCATGAAATGAATTGGGATATAAGTCCTCTTTCTATTCTCTGAAACTGAAATTTCTGCAAGACTGAATAACTTGGGGATAGCCTTTAC;MAPQ=60;MATEID=988228:2;MATENM=0;NM=4;NUMPARTS=7;REPSEQ=AA;SCTG=c_554_1_2235_0C;SPAN=2794834;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:13:0:3.6:39.6,3.6,0:13:0:-39.61:39.61\nX\t54890705\t1003600:1\tG\tG[Un_JTFH01001605v1_decoy:1[\t46\tPASS\tDISC_MAPQ=255;EVDNC=TSI_L;MAPQ=60;MATEID=1003600:2;MATENM=0;NM=0;NUMPARTS=3;SCTG=c_2448_1_1195_1C;SPAN=-1;SUBN=1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:16:5:4.2:46.2,4.2,0:16:0:-46.21:46.21\nX\t55652526\t988228:2\tT\tT[X:52857692[\t39\tPASS\tDISC_MAPQ=255;EVDNC=TSI_L;HOMSEQ=ACTTTATAA;INSERTION=TGTAAAGCTGTAAAATTTTAAGTGGGAGCATCATAAGTCAGGGGCATCTGTATTCTCTCTGTTGGACTTTGGTATCCAGGTTACACTATCTTCATGAAATGAATTGGGATATAAGTCCTCTTTCTATTCTCTGAAACTGAAATTTCTGCAAGACTGAATAACTTGGGGATAGCCTTTAC;MAPQ=60;MATEID=988228:1;MATENM=4;NM=0;NUMPARTS=7;REPSEQ=AA;SCTG=c_554_1_2235_0C;SPAN=2794834;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:13:0:3.6:39.6,3.6,0:13:0:-39.61:39.61\nX\t55676039\t932475:1\tT\tT[X:55683405[\t23\tPASS\tDISC_MAPQ=30;EVDNC=DSCRD;IMPRECISE;MAPQ=30;MATEID=932475:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=23:55676039(+)-23:55683405(-)__23_55664001_55689001D;SPAN=7366;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:8:3:2.1:23.1,2.1,0:0:8:-23.11:23.11\nX\t55683405\t932475:2\tT\t]X:55676039]T\t23\tPASS\tDISC_MAPQ=28;EVDNC=DSCRD;IMPRECISE;MAPQ=28;MATEID=932475:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=23:55676039(+)-23:55683405(-)__23_55664001_55689001D;SPAN=7366;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:8:3:2.1:23.1,2.1,0:0:8:-23.11:23.11\nX\t62600756\t933238:1\tA\t]X:62601314]A\t47\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=ACATAAAAACTAGACAGAAGCCTTCTCAGAAACTACTTTGTGATGT;MAPQ=60;MATEID=933238:2;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_23_62597501_62622501_43C;SPAN=558;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:17:30:27.8:47.6,0,27.8:14:7:-47.96:47.96\nX\t62601314\t933238:2\tT\tT[X:62600756[\t47\tPASS\tDISC_MAPQ=50;EVDNC=ASDIS;HOMSEQ=ACATAAAAACTAGACAGAAGCCTTCTCAGAAACTACTTTGTGATGT;MAPQ=60;MATEID=933238:1;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_23_62597501_62622501_43C;SPAN=558;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:17:30:27.8:47.6,0,27.8:14:7:-47.96:47.96\nX\t64507376\t933494:2\tA\tA[14:52475035[\t42\tPASS\tDISC_MAPQ=28;EVDNC=DSCRD;IMPRECISE;MAPQ=13;MATEID=933494:1;MATENM=3;NM=0;NUMPARTS=2;SCTG=c_23_64484001_64509001_20C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:14:4:3.9:42.9,3.9,0:10:9:-42.91:42.91\nX\t64512169\t933497:2\tT\t[2:4274462[T\t36\tPASS\tDISC_MAPQ=48;EVDNC=ASDIS;HOMSEQ=CA;MAPQ=16;MATEID=933497:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_23_64508501_64533501_2C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:12:5:3.3:36.3,3.3,0:7:5:-36.31:36.31\nX\t68328802\t934007:2\tC\tC[17:45488644[\t52\tPASS\tDISC_MAPQ=57;EVDNC=DSCRD;IMPRECISE;MAPQ=57;MATEID=934007:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=17:45488644(-)-23:68328802(+)__23_68306001_68331001D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:18:16:4.8:52.8,4.8,0:0:18:-52.81:52.81\nX\t70909425\t934404:1\tA\t[X:70920177[A\t52\tPASS\tDISC_MAPQ=59;EVDNC=TSI_L;HOMSEQ=CCATGTT;MAPQ=60;MATEID=934404:2;MATENM=2;NM=0;NUMPARTS=3;REPSEQ=TT;SCTG=c_23_70903001_70928001_4C;SPAN=10752;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:18:13:4.8:52.8,4.8,0:14:8:-52.81:52.81\nX\t70909570\t934405:1\tT\tT]X:70917407]\t28\tPASS\tEVDNC=ASSMB;HOMSEQ=AT;MAPQ=60;MATEID=934405:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_23_70903001_70928001_3C;SPAN=7837;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:16:8.9:28.7,0,8.9:10:0:-28.89:28.89\nX\t70917407\t934405:2\tT\tT]X:70909570]\t28\tPASS\tEVDNC=ASSMB;HOMSEQ=AT;MAPQ=60;MATEID=934405:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_23_70903001_70928001_3C;SPAN=7837;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:16:8.9:28.7,0,8.9:10:0:-28.89:28.89\nX\t70920177\t934404:2\tC\t[X:70909425[C\t52\tPASS\tDISC_MAPQ=60;EVDNC=TSI_L;HOMSEQ=CCATGTT;MAPQ=60;MATEID=934404:1;MATENM=0;NM=2;NUMPARTS=3;REPSEQ=TT;SCTG=c_23_70903001_70928001_4C;SPAN=10752;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:18:13:4.8:52.8,4.8,0:14:8:-52.81:52.81\nX\t76034035\t935120:1\tT\tT[X:76034332[\t99\tPASS\tDISC_MAPQ=59;EVDNC=ASDIS;HOMSEQ=AAATGTCTTCTTTT;MAPQ=48;MATEID=935120:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_23_76023501_76048501_4C;SPAN=297;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:43:5:12:132,12,0:38:6:-132:132\nX\t76034332\t935120:2\tA\t]X:76034035]A\t99\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AAATGTCTTCTTTT;MAPQ=60;MATEID=935120:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_23_76023501_76048501_4C;SPAN=297;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:43:5:12:132,12,0:38:6:-132:132\nX\t77865920\t935477:1\tC\tC[X:77868370[\t56\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=CTCACGCCTGTAATCCCAGCACTTTGGGAGGC;MAPQ=60;MATEID=935477:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_23_77861001_77886001_29C;SPAN=2450;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:19:5:5.1:56.1,5.1,0:11:12:-56.11:56.11\nX\t77868370\t935477:2\tC\t]X:77865920]C\t56\tPASS\tDISC_MAPQ=59;EVDNC=ASDIS;HOMSEQ=CTCACGCCTGTAATCCCAGCACTTTGGGAGGC;MAPQ=60;MATEID=935477:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_23_77861001_77886001_29C;SPAN=2450;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:19:5:5.1:56.1,5.1,0:11:12:-56.11:56.11\nX\t79412522\t935715:1\tC\tC[X:79415029[\t41\tPASS\tEVDNC=ASSMB;HOMSEQ=C;MAPQ=60;MATEID=935715:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_23_79404501_79429501_21C;SPAN=2507;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:19:4.7:41,0,4.7:14:0:-42.24:42.24\nX\t79415029\t935715:2\tC\t]X:79412522]C\t41\tPASS\tEVDNC=ASSMB;HOMSEQ=C;MAPQ=60;MATEID=935715:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_23_79404501_79429501_21C;SPAN=2507;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:19:4.7:41,0,4.7:14:0:-42.24:42.24\nX\t81554533\t936101:1\tA\t]X:81557077]A\t29\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=936101:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_23_81536001_81561001_9C;SPAN=2544;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:23:26.6:29.9,0,26.6:11:0:-29.85:29.85\nX\t81557077\t936101:2\tC\tC[X:81554533[\t29\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=936101:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_23_81536001_81561001_9C;SPAN=2544;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:23:26.6:29.9,0,26.6:11:0:-29.85:29.85\nX\t84849013\t936673:1\tA\t[X:84880060[A\t26\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=936673:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=23:84849013(-)-23:84880060(-)__23_84843501_84868501D;SPAN=31047;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:9:8:2.4:26.4,2.4,0:0:9:-26.41:26.41\nX\t84880060\t936673:2\tC\t[X:84849013[C\t26\tPASS\tDISC_MAPQ=53;EVDNC=DSCRD;IMPRECISE;MAPQ=53;MATEID=936673:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=23:84849013(-)-23:84880060(-)__23_84843501_84868501D;SPAN=31047;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:9:8:2.4:26.4,2.4,0:0:9:-26.41:26.41\nX\t86350284\t937029:1\tG\tG[X:86354860[\t66\tPASS\tDISC_MAPQ=53;EVDNC=DSCRD;IMPRECISE;MAPQ=53;MATEID=937029:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=23:86350284(+)-23:86354860(-)__23_86338001_86363001D;SPAN=4576;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:22:6:6:66,6,0:0:22:-66.02:66.02\nX\t86354860\t937029:2\tC\t]X:86350284]C\t66\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=937029:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=23:86350284(+)-23:86354860(-)__23_86338001_86363001D;SPAN=4576;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:22:6:6:66,6,0:0:22:-66.02:66.02\nX\t87031756\t937199:1\tG\tG[X:87032222[\t39\tPASS\tEVDNC=ASSMB;INSERTION=GAGTTTTGTTTTAAG;MAPQ=60;MATEID=937199:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_23_87024001_87049001_7C;SPAN=466;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:13:10:3.6:39.6,3.6,0:13:0:-39.61:39.61\nX\t87032222\t937199:2\tT\t]X:87031756]T\t39\tPASS\tEVDNC=ASSMB;INSERTION=GAGTTTTGTTTTAAG;MAPQ=60;MATEID=937199:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_23_87024001_87049001_7C;SPAN=466;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:13:10:3.6:39.6,3.6,0:13:0:-39.61:39.61\nX\t89206255\t937778:1\tT\tT[X:89207312[\t3\tPASS\tDISC_MAPQ=7;EVDNC=ASDIS;HOMSEQ=GTGTCGTAAAATACCGACGTATCTGTTATAATCGTCGGTGTCGTAAAATACCGACGTATAT;MAPQ=16;MATEID=937778:2;MATENM=4;NM=9;NUMPARTS=2;SCTG=c_23_89204501_89229501_6C;SPAN=1057;SUBN=1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:106:3.5:3.5,0,260.9:6:4:-3.214:18.96\nX\t89207312\t937778:2\tG\t]X:89206255]G\t3\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=GTGTCGTAAAATACCGACGTATCTGTTATAATCGTCGGTGTCGTAAAATACCGACGTATAT;MAPQ=60;MATEID=937778:1;MATENM=9;NM=4;NUMPARTS=2;SCTG=c_23_89204501_89229501_6C;SPAN=1057;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:106:3.5:3.5,0,260.9:6:4:-3.214:18.96\nX\t93541300\t938557:1\tT\tT[X:93546506[\t46\tPASS\tEVDNC=ASSMB;HOMSEQ=TAT;MAPQ=60;MATEID=938557:2;MATENM=8;NM=1;NUMPARTS=2;SCTG=c_23_93541001_93566001_10C;SPAN=5206;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:15:8:4.2:46.2,4.2,0:15:0:-46.21:46.21\nX\t93546506\t938557:2\tT\t]X:93541300]T\t46\tPASS\tEVDNC=ASSMB;HOMSEQ=TAT;MAPQ=60;MATEID=938557:1;MATENM=1;NM=8;NUMPARTS=2;SCTG=c_23_93541001_93566001_10C;SPAN=5206;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:15:8:4.2:46.2,4.2,0:15:0:-46.21:46.21\nX\t93733574\t948094:1\tT\t]X:150010694]T\t29\tPASS\tEVDNC=ASSMB;HOMSEQ=TGG;MAPQ=60;MATEID=948094:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_23_149989001_150014001_9C;SPAN=56277120;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:10:6:2.7:29.7,2.7,0:10:0:-29.71:29.71\nX\t97170044\t939151:1\tA\tA[X:97179380[\t37\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=939151:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_23_97167001_97192001_10C;SPAN=9336;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:30:37.7:37.7,0,37.7:14:0:-37.78:37.78\nX\t97179380\t939151:2\tA\t]X:97170044]A\t37\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=939151:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_23_97167001_97192001_10C;SPAN=9336;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:30:37.7:37.7,0,37.7:14:0:-37.78:37.78\nX\t98861246\t939490:1\tG\tG[X:98861440[\t19\tPASS\tEVDNC=ASSMB;INSERTION=TAGGAAAAAC;MAPQ=60;MATEID=939490:2;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_23_98857501_98882501_8C;SPAN=194;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:25:19.4:19.4,0,42.5:8:0:-19.38:19.89\nX\t98861440\t939490:2\tG\t]X:98861246]G\t19\tPASS\tEVDNC=ASSMB;INSERTION=TAGGAAAAAC;MAPQ=60;MATEID=939490:1;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_23_98857501_98882501_8C;SPAN=194;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:25:19.4:19.4,0,42.5:8:0:-19.38:19.89\nX\t104431017\t940520:1\tG\tG[X:104436824[\t34\tPASS\tEVDNC=ASSMB;HOMSEQ=AG;MAPQ=60;MATEID=940520:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_23_104419001_104444001_5C;SPAN=5807;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:31:34.4:34.4,0,41:13:0:-34.2:34.27\nX\t104436824\t940520:2\tA\t]X:104431017]A\t34\tPASS\tEVDNC=ASSMB;HOMSEQ=AG;MAPQ=60;MATEID=940520:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_23_104419001_104444001_5C;SPAN=5807;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:31:34.4:34.4,0,41:13:0:-34.2:34.27\nX\t105542844\t940773:2\tT\tT[2:157171629[\t29\tPASS\tEVDNC=ASSMB;HOMSEQ=AAAAT;MAPQ=60;MATEID=940773:1;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_23_105521501_105546501_0C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:10:10:2.7:29.7,2.7,0:10:0:-29.71:29.71\nX\t108048015\t941109:2\tT\tT[17:81970200[\t33\tPASS\tDISC_MAPQ=16;EVDNC=DSCRD;IMPRECISE;MAPQ=16;MATEID=941109:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=17:81970200(-)-23:108048015(+)__23_108045001_108070001D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:11:5:3:33,3,0:0:11:-33.01:33.01\nX\t111769097\t941661:2\tT\tT[14:20273533[\t42\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;INSERTION=A;MAPQ=60;MATEID=941661:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_23_111769001_111794001_6C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:13:14:3.9:42.9,3.9,0:9:8:-42.71:42.71\nX\t123838983\t943695:1\tC\tC[X:123839817[\t46\tPASS\tDISC_MAPQ=55;EVDNC=ASDIS;HOMSEQ=GGGGTTTCACCATGTTGGCCAGGCTGGTCTAGAACTCCTGAC;MAPQ=60;MATEID=943695:2;MATENM=1;NM=2;NUMPARTS=2;SCTG=c_23_123823001_123848001_34C;SPAN=834;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:15:6:4.2:46.2,4.2,0:11:7:-46.21:46.21\nX\t123839817\t943695:2\tG\t]X:123838983]G\t46\tPASS\tDISC_MAPQ=49;EVDNC=ASDIS;HOMSEQ=GGGGTTTCACCATGTTGGCCAGGCTGGTCTAGAACTCCTGAC;MAPQ=60;MATEID=943695:1;MATENM=2;NM=1;NUMPARTS=2;SCTG=c_23_123823001_123848001_34C;SPAN=834;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:15:6:4.2:46.2,4.2,0:11:7:-46.21:46.21\nX\t128240984\t944454:1\tA\tA[X:128745219[\t33\tPASS\tEVDNC=ASSMB;HOMSEQ=A;MAPQ=60;MATEID=944454:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_23_128723001_128748001_38C;SPAN=504235;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:11:7:3:33,3,0:11:0:-33.01:33.01\nX\t128745219\t944454:2\tA\t]X:128240984]A\t33\tPASS\tEVDNC=ASSMB;HOMSEQ=A;MAPQ=60;MATEID=944454:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_23_128723001_128748001_38C;SPAN=504235;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:11:7:3:33,3,0:11:0:-33.01:33.01\nX\t129004193\t944531:1\tT\tT[X:129005596[\t14\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=944531:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_23_128992501_129017501_5C;SPAN=1403;SVTYPE=BND\tGT:A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808995(-)-23:155159534(+)__23_155158501_155183501D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:22:17:6:66,6,0:0:22:-66.02:66.02\n"
  },
  {
    "path": "tests/AnnotSV/test_23_Exomiser/input/GRCh38-1SV.vcf",
    "content": "##fileformat=VCFv4.2\n#CHROM\tPOS\tID\tREF\tALT\tQUAL\tFILTER\tINFO\tFORMAT\tsample\n10\t121496612\t569156:2\tA\t]10:122457304]C\t72\tPASS\tEVDNC=ASSMB;INSERTION=TTATTAATTAATTAACTAAAATTAAATTATTTAGTTAATTTAATTAACTAAACT;MAPQ=60;MATEID=569156:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_122451001_122476001_97C;SPAN=444;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:24:17:6.6:72.6,6.6,0:24:0:-72.62:72.62\n"
  },
  {
    "path": "tests/AnnotSV/test_23_Exomiser/input/GRCh38-multiSV.vcf",
    "content": "##fileformat=VCFv4.2\n#CHROM\tPOS\tID\tREF\tALT\tQUAL\tFILTER\tINFO\tFORMAT\tsample1\n1\t1477855\t389:1\tG\t]1:1477984]G\t37\tPASS\tEVDNC=ASSMB;INSERTION=TGT;MAPQ=60;MATEID=389:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_1_1470001_1495001_12C;SPAN=129;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:33:37.1:37.1,0,43.7:14:0:-36.94:36.99\n1\t1477984\t389:2\tA\tA[1:1477855[\t37\tPASS\tEVDNC=ASSMB;INSERTION=TGT;MAPQ=60;MATEID=389:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_1_1470001_1495001_12C;SPAN=129;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:33:37.1:37.1,0,43.7:14:0:-36.94:36.99\n1\t1934936\t523:1\tT\tT[1:1935574[\t49\tPASS\tDISC_MAPQ=46;EVDNC=ASDIS;HOMSEQ=GTGTTAGGTTGTAGGTACACAGGT;MAPQ=60;MATEID=523:2;MATENM=3;NM=0;NUMPARTS=2;SCTG=c_1_1911001_1936001_35C;SPAN=638;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:17:7:4.5:49.5,4.5,0:16:4:-49.51:49.51\n1\t1935574\t523:2\tG\t]1:1934936]G\t49\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=GTGTTAGGTTGTAGGTACACAGGT;MAPQ=60;MATEID=523:1;MATENM=0;NM=3;NUMPARTS=2;SCTG=c_1_1911001_1936001_35C;SPAN=638;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:17:7:4.5:49.5,4.5,0:16:4:-49.51:49.51\n1\t3176048\t1705:1\tC\t]1:3176290]C\t16\tPASS\tEVDNC=ASSMB;HOMSEQ=CATCCATCCATCCATCCATCCATC;MAPQ=60;MATEID=1705:2;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_1_3160501_3185501_4C;SPAN=242;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:7:23:16.7:16.7,0,39.8:7:0:-16.64:17.22\n1\t3176290\t1705:2\tC\tC[1:3176048[\t16\tPASS\tEVDNC=ASSMB;HOMSEQ=CATCCATCCATCCATCCATCCATC;MAPQ=60;MATEID=1705:1;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_1_3160501_3185501_4C;SPAN=242;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:7:23:16.7:16.7,0,39.8:7:0:-16.64:17.22\n1\t4018528\t1874:1\tG\tG[1:4019251[\t22\tPASS\tEVDNC=ASSMB;INSERTION=CTC;MAPQ=60;MATEID=1874:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_4018001_4043001_10C;SPAN=723;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:15:15.5:22.1,0,15.5:8:0:-22.25:22.25\n1\t4019251\t1874:2\tT\t]1:4018528]T\t22\tPASS\tEVDNC=ASSMB;INSERTION=CTC;MAPQ=60;MATEID=1874:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_4018001_4043001_10C;SPAN=723;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:15:15.5:22.1,0,15.5:8:0:-22.25:22.25\n1\t6937887\t655207:1\tC\tC[12:132742761[\t20\tPASS\tDISC_MAPQ=22;EVDNC=DSCRD;IMPRECISE;MAPQ=22;MATEID=655207:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:6937887(+)-12:132742761(-)__12_132741001_132766001D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:35:20:20,0,66.2:0:9:-19.87:21.36\n1\t7429774\t888671:1\tT\tT[20:61337291[\t16\tPASS\tDISC_MAPQ=15;EVDNC=DSCRD;IMPRECISE;MAPQ=15;MATEID=888671:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:7429774(+)-20:61337291(-)__20_61323501_61348501D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:59:16.4:16.4,0,131.9:0:10:-16.43:21.68\n1\t9045606\t3054:1\tG\t]1:9049477]G\t82\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=GGCCGGGCATGGTGGCTCACGCCTGTAATCCCAGCA;MAPQ=60;MATEID=3054:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_9040501_9065501_7C;SPAN=3871;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:27:26:7.5:82.5,7.5,0:16:17:-82.52:82.52\n1\t9049477\t3054:2\tA\tA[1:9045606[\t82\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=GGCCGGGCATGGTGGCTCACGCCTGTAATCCCAGCA;MAPQ=60;MATEID=3054:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_9040501_9065501_7C;SPAN=3871;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:27:26:7.5:82.5,7.5,0:16:17:-82.52:82.52\n1\t13299454\t4064:1\tG\tG[6:33062526[\t46\tPASS\tDISC_MAPQ=13;EVDNC=TSI_L;MAPQ=23;MATEID=4064:2;MATENM=11;NM=1;NUMPARTS=3;REPSEQ=GG;SCTG=c_1_13279001_13304001_4C;SPAN=-1;SUBN=1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:16:12:4.2:46.2,4.2,0:13:5:-46.21:46.21\n1\t16621374\t4878:1\tC\t[1:16951695[C\t16\tPASS\tDISC_MAPQ=51;EVDNC=DSCRD;IMPRECISE;MAPQ=51;MATEID=4878:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:16621374(-)-1:16951695(-)__1_16611001_16636001D;SPAN=330321;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:37:16.1:16.1,0,75.5:0:8:-16.01:18.29\n1\t16725253\t63373:1\tA\t[1:234776441[A\t99\tPASS\tDISC_MAPQ=255;EVDNC=ASDIS;INSERTION=GCAGAAGCCGGCGGGATGGGGC;MAPQ=60;MATEID=63373:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_234759001_234784001_38C;SPAN=218051188;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:81:22:22.5:247.5,22.5,0:52:53:-247.6:247.6\n1\t16951695\t4878:2\tT\t[1:16621374[T\t16\tPASS\tDISC_MAPQ=51;EVDNC=DSCRD;IMPRECISE;MAPQ=51;MATEID=4878:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:16621374(-)-1:16951695(-)__1_16611001_16636001D;SPAN=330321;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:37:16.1:16.1,0,75.5:0:8:-16.01:18.29\n1\t23392332\t6511:1\tG\t]1:23392792]G\t29\tPASS\tDISC_MAPQ=25;EVDNC=DSCRD;IMPRECISE;MAPQ=25;MATEID=6511:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:23392332(-)-1:23392792(+)__1_23373001_23398001D;SPAN=460;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:25:29.3:29.3,0,32.6:0:11:-29.28:29.3\n1\t23392792\t6511:2\tC\tC[1:23392332[\t29\tPASS\tDISC_MAPQ=17;EVDNC=DSCRD;IMPRECISE;MAPQ=17;MATEID=6511:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:23392332(-)-1:23392792(+)__1_23373001_23398001D;SPAN=460;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:25:29.3:29.3,0,32.6:0:11:-29.28:29.3\n1\t23628304\t6591:1\tG\tG[1:23628951[\t49\tPASS\tDISC_MAPQ=40;EVDNC=ASDIS;HOMSEQ=GCCCACCTCGGCCTCCCAAAGTGCTGG;MAPQ=60;MATEID=6591:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_23618001_23643001_9C;SPAN=647;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:17:7:4.5:49.5,4.5,0:11:6:-49.51:49.51\n1\t23628951\t6591:2\tG\t]1:23628304]G\t49\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=GCCCACCTCGGCCTCCCAAAGTGCTGG;MAPQ=60;MATEID=6591:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_23618001_23643001_9C;SPAN=647;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:17:7:4.5:49.5,4.5,0:11:6:-49.51:49.51\n1\t24832212\t6918:1\tT\tT[1:24835019[\t46\tPASS\tEVDNC=ASSMB;HOMSEQ=TTGATTTTTTATTTTT;MAPQ=60;MATEID=6918:2;MATENM=5;NM=3;NUMPARTS=2;SCTG=c_1_24818501_24843501_5C;SPAN=2807;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:15:12:4.2:46.2,4.2,0:15:0:-46.21:46.21\n1\t24835019\t6918:2\tT\t]1:24832212]T\t46\tPASS\tEVDNC=ASSMB;HOMSEQ=TTGATTTTTTATTTTT;MAPQ=60;MATEID=6918:1;MATENM=3;NM=5;NUMPARTS=2;SCTG=c_1_24818501_24843501_5C;SPAN=2807;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:15:12:4.2:46.2,4.2,0:15:0:-46.21:46.21\n1\t25287187\t7022:1\tC\t]1:25405599]C\t23\tPASS\tDISC_MAPQ=42;EVDNC=DSCRD;IMPRECISE;MAPQ=42;MATEID=7022:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:25287187(-)-1:25405599(+)__1_25382001_25407001D;SPAN=118412;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:8:7:2.1:23.1,2.1,0:0:8:-23.11:23.11\n1\t25287371\t7007:1\tG\tG]1:25287867]\t19\tPASS\tDISC_MAPQ=17;EVDNC=DSCRD;IMPRECISE;MAPQ=17;MATEID=7007:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:25287371(+)-1:25287867(+)__1_25284001_25309001D;SPAN=496;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:26:19.1:19.1,0,45.5:0:8:-19.1:19.73\n1\t25287867\t7007:2\tC\tC]1:25287371]\t19\tPASS\tDISC_MAPQ=46;EVDNC=DSCRD;IMPRECISE;MAPQ=46;MATEID=7007:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:25287371(+)-1:25287867(+)__1_25284001_25309001D;SPAN=496;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:26:19.1:19.1,0,45.5:0:8:-19.1:19.73\n1\t25405599\t7022:2\tA\tA[1:25287187[\t23\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=7022:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:25287187(-)-1:25405599(+)__1_25382001_25407001D;SPAN=118412;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:8:7:2.1:23.1,2.1,0:0:8:-23.11:23.11\n1\t28189261\t847363:1\tT\tT]19:23845125]\t23\tPASS\tDISC_MAPQ=57;EVDNC=DSCRD;IMPRECISE;MAPQ=57;MATEID=847363:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:28189261(+)-19:23845125(+)__19_23838501_23863501D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:22:23.6:23.6,0,30.2:0:9:-23.53:23.59\n1\t28410089\t7545:1\tC\t]1:28410215]C\t26\tPASS\tEVDNC=ASSMB;HOMSEQ=CC;MAPQ=60;MATEID=7545:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_28395501_28420501_15C;SPAN=126;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:24:26.3:26.3,0,32.9:10:0:-26.26:26.32\n1\t28410215\t7545:2\tC\tC[1:28410089[\t26\tPASS\tEVDNC=ASSMB;HOMSEQ=CC;MAPQ=60;MATEID=7545:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_28395501_28420501_15C;SPAN=126;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:24:26.3:26.3,0,32.9:10:0:-26.26:26.32\n1\t29279188\t307504:1\tT\tT]5:110659597]\t28\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=307504:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:29279188(+)-5:110659597(+)__5_110642001_110667001D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:16:8.9:28.7,0,8.9:0:10:-28.89:28.89\n1\t29552243\t7974:1\tN\tN]1:30655921]\t20\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=7974:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:29552243(+)-1:30655921(+)__1_30649501_30674501D;SPAN=1103678;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:22:20.3:20.3,0,33.5:0:8:-20.22:20.45\n1\t30655921\t7974:2\tG\tG]1:29552243]\t20\tPASS\tDISC_MAPQ=53;EVDNC=DSCRD;IMPRECISE;MAPQ=53;MATEID=7974:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:29552243(+)-1:30655921(+)__1_30649501_30674501D;SPAN=1103678;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:22:20.3:20.3,0,33.5:0:8:-20.22:20.45\n1\t32790315\t122996:1\tT\tT]2:161095746]\t19\tPASS\tDISC_MAPQ=32;EVDNC=DSCRD;IMPRECISE;MAPQ=32;MATEID=122996:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:32790315(+)-2:161095746(+)__2_161087501_161112501D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:24:19.7:19.7,0,39.5:0:8:-19.66:20.07\n1\t33010843\t14040:1\tA\tA[1:58630799[\t28\tPASS\tDISC_MAPQ=41;EVDNC=DSCRD;IMPRECISE;MAPQ=41;MATEID=14040:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:33010843(+)-1:58630799(-)__1_58628501_58653501D;SPAN=25619956;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:27:28.7:28.7,0,38.6:0:11:-28.72:28.81\n1\t33050733\t8608:1\tA\t]7:24409092]A\t99\tPASS\tEVDNC=ASSMB;INSERTION=G;MAPQ=60;MATEID=8608:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_33050501_33075501_8C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:37:32:10.2:112.2,10.2,0:37:0:-112.2:112.2\n1\t35161530\t8994:1\tC\tC[1:35161848[\t82\tPASS\tDISC_MAPQ=56;EVDNC=ASDIS;HOMSEQ=GGGC;MAPQ=60;MATEID=8994:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_35157501_35182501_39C;SPAN=318;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:27:13:7.5:82.5,7.5,0:22:7:-82.52:82.52\n1\t35161848\t8994:2\tG\t]1:35161530]G\t82\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=GGGC;MAPQ=60;MATEID=8994:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_35157501_35182501_39C;SPAN=318;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:27:13:7.5:82.5,7.5,0:22:7:-82.52:82.52\n1\t35259113\t739080:1\tA\tA[15:76800145[\t92\tPASS\tDISC_MAPQ=8;EVDNC=ASDIS;HOMSEQ=A;MAPQ=33;MATEID=739080:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_15_76783001_76808001_25C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:31:21:8.4:92.4,8.4,0:29:9:-92.42:92.42\n1\t36267575\t9227:1\tC\tC]1:36269076]\t17\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=9227:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:36267575(+)-1:36269076(+)__1_36260001_36285001D;SPAN=1501;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:33:17.3:17.3,0,63.5:0:8:-17.13:18.75\n1\t36267982\t9229:1\tC\t[1:36268906[C\t69\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=CCAGCCTGGCCAATATGGTGAAACCCCATCTCTACT;MAPQ=60;MATEID=9229:2;MATENM=1;NM=2;NUMPARTS=2;SCTG=c_1_36260001_36285001_7C;SPAN=924;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:23:21:6.3:69.3,6.3,0:18:7:-69.32:69.32\n1\t36268906\t9229:2\tA\t[1:36267982[A\t69\tPASS\tDISC_MAPQ=57;EVDNC=ASDIS;HOMSEQ=CCAGCCTGGCCAATATGGTGAAACCCCATCTCTACT;MAPQ=60;MATEID=9229:1;MATENM=2;NM=1;NUMPARTS=2;SCTG=c_1_36260001_36285001_7C;SPAN=924;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:23:21:6.3:69.3,6.3,0:18:7:-69.32:69.32\n1\t36269076\t9227:2\tT\tT]1:36267575]\t17\tPASS\tDISC_MAPQ=54;EVDNC=DSCRD;IMPRECISE;MAPQ=54;MATEID=9227:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:36267575(+)-1:36269076(+)__1_36260001_36285001D;SPAN=1501;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:33:17.3:17.3,0,63.5:0:8:-17.13:18.75\n1\t36958707\t9337:1\tC\tC[1:36960147[\t66\tPASS\tDISC_MAPQ=40;EVDNC=DSCRD;IMPRECISE;MAPQ=40;MATEID=9337:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:36958707(+)-1:36960147(-)__1_36946001_36971001D;SPAN=1440;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:22:4:6:66,6,0:0:22:-66.02:66.02\n1\t36960147\t9337:2\tG\t]1:36958707]G\t66\tPASS\tDISC_MAPQ=53;EVDNC=DSCRD;IMPRECISE;MAPQ=53;MATEID=9337:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:36958707(+)-1:36960147(-)__1_36946001_36971001D;SPAN=1440;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:22:4:6:66,6,0:0:22:-66.02:66.02\n1\t37472656\t90165:1\tT\t]2:68687747]T\t41\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;INSERTION=ATTATTAG;MAPQ=60;MATEID=90165:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_68673501_68698501_14C;SPAN=-1;SUBN=7;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:19:4.7:41,0,4.7:9:10:-42.24:42.24\n1\t37472775\t90166:1\tG\tG[2:68687751[\t56\tPASS\tEVDNC=ASSMB;HOMSEQ=CCAG;MAPQ=60;MATEID=90166:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_2_68673501_68698501_111C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:19:18:5.1:56.1,5.1,0:19:0:-56.11:56.11\n1\t39504305\t9980:1\tT\t]1:39504874]T\t65\tPASS\tDISC_MAPQ=51;EVDNC=DSCRD;IMPRECISE;MAPQ=51;MATEID=9980:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:39504305(-)-1:39504874(+)__1_39494001_39519001D;SPAN=569;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:23:37:26:65.6,0,26:0:23:-66.36:66.36\n1\t39504874\t9980:2\tG\tG[1:39504305[\t65\tPASS\tDISC_MAPQ=59;EVDNC=DSCRD;IMPRECISE;MAPQ=59;MATEID=9980:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:39504305(-)-1:39504874(+)__1_39494001_39519001D;SPAN=569;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:23:37:26:65.6,0,26:0:23:-66.36:66.36\n1\t43593625\t10849:1\tG\tG]1:43594215]\t69\tPASS\tEVDNC=ASSMB;HOMSEQ=GCCAGGCACGGTGGCT;INSERTION=AC;MAPQ=60;MATEID=10849:2;MATENM=0;NM=3;NUMPARTS=3;SCTG=c_1_43585501_43610501_3C;SECONDARY;SPAN=590;SUBN=6;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:23:13:6.3:69.3,6.3,0:23:0:-69.32:69.32\n1\t43594215\t10849:2\tG\tG]1:43593625]\t69\tPASS\tEVDNC=ASSMB;HOMSEQ=GCCAGGCACGGTGGCT;INSERTION=AC;MAPQ=60;MATEID=10849:1;MATENM=3;NM=0;NUMPARTS=3;SCTG=c_1_43585501_43610501_3C;SECONDARY;SPAN=590;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:23:13:6.3:69.3,6.3,0:23:0:-69.32:69.32\n1\t44098924\t160041:1\tT\t]3:41609700]T\t29\tPASS\tDISC_MAPQ=53;EVDNC=DSCRD;IMPRECISE;MAPQ=53;MATEID=160041:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:44098924(-)-3:41609700(+)__3_41601001_41626001D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:10:10:2.7:29.7,2.7,0:0:10:-29.71:29.71\n1\t44104205\t160035:1\tT\tT[3:41580812[\t42\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=160035:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_3_41576501_41601501_10C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:14:14:3.9:42.9,3.9,0:14:0:-42.91:42.91\n1\t44779028\t11200:1\tT\tT[1:44779477[\t17\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=11200:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_44761501_44786501_16C;SPAN=449;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:7:22:17:17,0,36.8:7:0:-16.92:17.39\n1\t44779477\t11200:2\tC\t]1:44779028]C\t17\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=11200:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_44761501_44786501_16C;SPAN=449;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:7:22:17:17,0,36.8:7:0:-16.92:17.39\n1\t45703368\t11370:1\tT\tT[Un_KN707671v1_decoy:1[\t66\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=11370:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_45692501_45717501_22C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:22:19:6:66,6,0:22:0:-66.02:66.02\n1\t46939969\t11731:1\tA\t[1:47138878[A\t38\tPASS\tDISC_MAPQ=52;EVDNC=DSCRD;IMPRECISE;MAPQ=52;MATEID=11731:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:46939969(-)-1:47138878(-)__1_47138001_47163001D;SPAN=198909;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:18:5:38,0,5:0:13:-39.01:39.01\n1\t47138878\t11731:2\tA\t[1:46939969[A\t38\tPASS\tDISC_MAPQ=54;EVDNC=DSCRD;IMPRECISE;MAPQ=54;MATEID=11731:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:46939969(-)-1:47138878(-)__1_47138001_47163001D;SPAN=198909;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:18:5:38,0,5:0:13:-39.01:39.01\n1\t51609009\t12475:1\tA\t]1:51840062]A\t26\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=A;MAPQ=60;MATEID=12475:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_1_51817501_51842501_2C;SPAN=231053;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:23:26.6:26.6,0,29.9:8:8:-26.55:26.57\n1\t51840062\t12475:2\tA\tA[1:51609009[\t26\tPASS\tDISC_MAPQ=52;EVDNC=ASDIS;HOMSEQ=A;MAPQ=60;MATEID=12475:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_1_51817501_51842501_2C;SPAN=231053;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:23:26.6:26.6,0,29.9:8:8:-26.55:26.57\n1\t53952867\t12975:1\tT\t]1:56216061]T\t45\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TT;MAPQ=60;MATEID=12975:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_53949001_53974001_65C;SPAN=2263194;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:17:39:45.2:45.2,0,51.8:9:14:-45.15:45.19\n1\t53952995\t12977:1\tC\t]18:6317356]C\t15\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;MAPQ=60;MATEID=12977:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_53949001_53974001_190C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:52:15.2:15.2,0,114.2:6:3:-15.09:19.61\n1\t53953226\t12984:1\tG\tG[9:25849461[\t22\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;MAPQ=60;MATEID=12984:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_53949001_53974001_66C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:39:22.1:22.1,0,74.9:6:6:-22.05:23.72\n1\t53953310\t12986:1\tT\tT]1:53953873]\t28\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=12986:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:53953310(+)-1:53953873(+)__1_53949001_53974001D;SPAN=563;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:40:28.4:28.4,0,71.3:0:12:-28.37:29.43\n1\t53953873\t12986:2\tA\tA]1:53953310]\t28\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=12986:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:53953310(+)-1:53953873(+)__1_53949001_53974001D;SPAN=563;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:40:28.4:28.4,0,71.3:0:12:-28.37:29.43\n1\t53953907\t866065:1\tC\t[20:21065659[C\t32\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=CT;MAPQ=60;MATEID=866065:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_21045501_21070501_8C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:14:2.6:32.3,0,2.6:9:4:-33.83:33.83\n1\t53954234\t13008:1\tT\t[8:1724902[T\t26\tPASS\tDISC_MAPQ=60;EVDNC=TSI_L;HOMSEQ=A;INSERTION=AGCCCAGAGACAGAGCTTTCAAGGTGCCTGCTCAGTTTATGAGCCAAGTTTCTATTCTTTTCTGCATGTGTTT;MAPQ=60;MATEID=13008:2;MATENM=0;NM=0;NUMPARTS=3;SCTG=c_1_53949001_53974001_174C;SPAN=-1;SUBN=1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:16:93:26.9:26.9,0,205.1:16:3:-26.67:34.81\n1\t53954236\t260688:1\tA\tA[4:149687001[\t30\tPASS\tEVDNC=ASSMB;HOMSEQ=ACATAA;MAPQ=60;MATEID=260688:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_149670501_149695501_34C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:22:23.6:30.2,0,23.6:11:0:-30.15:30.15\n1\t53954306\t578367:1\tC\t[11:20762949[C\t39\tPASS\tDISC_MAPQ=255;EVDNC=ASDIS;MAPQ=60;MATEID=578367:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_20751501_20776501_46C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:13:9:3.6:39.6,3.6,0:11:3:-39.61:39.61\n1\t53954324\t13015:1\tC\t]13:56018554]C\t0\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=13015:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_53949001_53974001_79C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/0:7:108:6.9:0,6.9,283.8:7:0:7.251:12.08\n1\t53954398\t13030:1\tT\tT[4:116923084[\t0\tPASS\tEVDNC=ASSMB;HOMSEQ=TATTTCAT;MAPQ=60;MATEID=13030:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_1_53949001_53974001_46C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/0:7:98:4.2:0,4.2,254.1:7:0:4.44:12.39\n1\t53954555\t13050:1\tT\tT]2:198602574]\t16\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AAT;MAPQ=60;MATEID=13050:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_53949001_53974001_99C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:94:16.7:16.7,0,218:11:5:-16.49:26.94\n1\t53954591\t23420:1\tT\t[1:101901145[T\t27\tPASS\tDISC_MAPQ=255;EVDNC=ASDIS;HOMSEQ=GA;MAPQ=60;MATEID=23420:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_101895501_101920501_8C;SPAN=47946554;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:19:17.9:27.8,0,17.9:8:3:-27.73:27.73\n1\t53954647\t355239:1\tT\t[6:94103373[T\t49\tPASS\tDISC_MAPQ=255;EVDNC=ASDIS;HOMSEQ=AATA;MAPQ=60;MATEID=355239:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_94080001_94105001_4C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:16:17:4.5:49.5,4.5,0:10:12:-49.51:49.51\n1\t53954656\t13059:1\tT\t]9:29653849]T\t7\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=13059:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_53949001_53974001_206C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:90:7.7:7.7,0,218.9:10:0:-7.712:19.71\n1\t53954687\t283944:1\tT\t]5:28235202]T\t38\tPASS\tDISC_MAPQ=255;EVDNC=ASDIS;HOMSEQ=TT;MAPQ=60;MATEID=283944:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_5_28224001_28249001_78C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:27:28.7:38.6,0,28.7:9:10:-38.69:38.69\n1\t53954735\t13066:1\tC\t]X:141414291]C\t0\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=CTG;MAPQ=60;MATEID=13066:2;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_1_53949001_53974001_18C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:94:0.2:0.2,0,234.5:6:4:0.01462:14.79\n1\t53954830\t13069:1\tG\tG[7:71849933[\t3\tPASS\tEVDNC=ASSMB;INSERTION=ACAGTACTACAATGAACACTCTTA;MAPQ=60;MATEID=13069:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_53949001_53974001_68C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:93:3.8:3.8,0,228.2:9:0:-3.568:17.17\n1\t53954930\t23510:1\tT\t]1:102149200]T\t39\tPASS\tEVDNC=ASSMB;HOMSEQ=T;MAPQ=60;MATEID=23510:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_102140501_102165501_11C;SPAN=48194270;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:12:13:3.6:39.6,3.6,0:12:0:-39.28:39.28\n1\t53955314\t13082:1\tT\tT[14:54941811[\t28\tPASS\tDISC_MAPQ=50;EVDNC=DSCRD;IMPRECISE;MAPQ=50;MATEID=13082:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:53955314(+)-14:54941811(-)__1_53949001_53974001D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:16:8.9:28.7,0,8.9:0:10:-28.89:28.89\n1\t55240234\t998154:1\tG\tG]Un_JTFH01000519v1_decoy:1533]\t95\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=998154:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1362_1_1533_0C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:32:9:8.7:95.7,8.7,0:32:0:-95.72:95.72\n1\t56216061\t12975:2\tT\tT[1:53952867[\t45\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TT;MAPQ=60;MATEID=12975:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_53949001_53974001_65C;SPAN=2263194;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:17:39:45.2:45.2,0,51.8:9:14:-45.15:45.19\n1\t56365452\t13595:1\tC\tC[1:56369290[\t79\tPASS\tEVDNC=ASSMB;HOMSEQ=AAAAAGAACCACTGCCTC;MAPQ=60;MATEID=13595:2;MATENM=3;NM=9;NUMPARTS=2;SCTG=c_1_56350001_56375001_21C;SPAN=3838;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:26:20:7.2:79.2,7.2,0:26:0:-79.22:79.22\n1\t56369290\t13595:2\tA\t]1:56365452]A\t79\tPASS\tEVDNC=ASSMB;HOMSEQ=AAAAAGAACCACTGCCTC;MAPQ=60;MATEID=13595:1;MATENM=9;NM=3;NUMPARTS=2;SCTG=c_1_56350001_56375001_21C;SPAN=3838;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:26:20:7.2:79.2,7.2,0:26:0:-79.22:79.22\n1\t56530361\t13644:1\tC\t]1:56530674]C\t35\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;INSERTION=G;MAPQ=60;MATEID=13644:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_1_56521501_56546501_16C;SPAN=313;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:39:35.3:35.3,0,61.7:14:3:-35.25:35.68\n1\t56530674\t13644:2\tT\tT[1:56530361[\t35\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;INSERTION=G;MAPQ=60;MATEID=13644:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_1_56521501_56546501_16C;SPAN=313;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:39:35.3:35.3,0,61.7:14:3:-35.25:35.68\n1\t58630799\t14040:2\tC\t]1:33010843]C\t28\tPASS\tDISC_MAPQ=38;EVDNC=DSCRD;IMPRECISE;MAPQ=38;MATEID=14040:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:33010843(+)-1:58630799(-)__1_58628501_58653501D;SPAN=25619956;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:27:28.7:28.7,0,38.6:0:11:-28.72:28.81\n1\t58631258\t78199:1\tT\tT[2:31823482[\t52\tPASS\tDISC_MAPQ=50;EVDNC=DSCRD;IMPRECISE;MAPQ=50;MATEID=78199:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:58631258(+)-2:31823482(-)__2_31801001_31826001D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:18:15:4.8:52.8,4.8,0:0:18:-52.81:52.81\n1\t59491056\t439496:1\tT\t[8:6678940[T\t42\tPASS\tDISC_MAPQ=255;EVDNC=ASDIS;HOMSEQ=AGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAA;MAPQ=45;MATEID=439496:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_6664001_6689001_35C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:14:6:3.9:42.9,3.9,0:12:2:-42.91:42.91\n1\t60822424\t14479:1\tA\t]1:60822666]A\t99\tPASS\tEVDNC=ASSMB;HOMSEQ=ATA;MAPQ=60;MATEID=14479:2;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_1_60809001_60834001_4C;SPAN=242;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:35:58:46.4:99.2,0,46.4:35:0:-100.3:100.3\n1\t60822666\t14479:2\tA\tA[1:60822424[\t99\tPASS\tEVDNC=ASSMB;HOMSEQ=ATA;MAPQ=60;MATEID=14479:1;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_1_60809001_60834001_4C;SPAN=242;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:35:58:46.4:99.2,0,46.4:35:0:-100.3:100.3\n1\t63956963\t16730:1\tC\tC]1:70234741]\t29\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=16730:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:63956963(+)-1:70234741(+)__1_70217001_70242001D;SPAN=6277778;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:14:5.9:29,0,5.9:0:10:-29.91:29.91\n1\t64373280\t15448:1\tT\tT]1:64389687]\t23\tPASS\tDISC_MAPQ=54;EVDNC=DSCRD;IMPRECISE;MAPQ=54;MATEID=15448:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:64373280(+)-1:64389687(+)__1_64386001_64411001D;SPAN=16407;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:11:3.5:23.3,0,3.5:0:8:-24.05:24.05\n1\t64389687\t15448:2\tT\tT]1:64373280]\t23\tPASS\tDISC_MAPQ=25;EVDNC=DSCRD;IMPRECISE;MAPQ=25;MATEID=15448:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:64373280(+)-1:64389687(+)__1_64386001_64411001D;SPAN=16407;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:11:3.5:23.3,0,3.5:0:8:-24.05:24.05\n1\t65345199\t17796:1\tT\t]1:74835106]T\t56\tPASS\tDISC_MAPQ=59;EVDNC=DSCRD;IMPRECISE;MAPQ=59;MATEID=17796:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:65345199(-)-1:74835106(+)__1_74823001_74848001D;SPAN=9489907;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:19:7:5.1:56.1,5.1,0:0:19:-56.11:56.11\n1\t70234741\t16730:2\tC\tC]1:63956963]\t29\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=16730:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:63956963(+)-1:70234741(+)__1_70217001_70242001D;SPAN=6277778;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:14:5.9:29,0,5.9:0:10:-29.91:29.91\n1\t72339814\t989548:1\tC\tC]Un_KN707820v1_decoy:8307]\t62\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=989548:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_671_1_8307_5C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:21:6:5.7:62.7,5.7,0:21:0:-62.72:62.72\n1\t73903568\t81804:1\tT\t]2:40869772]T\t18\tPASS\tEVDNC=ASSMB;INSERTION=GAT;MAPQ=60;MATEID=81804:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_40866001_40891001_21C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:7:18:18.2:18.2,0,24.8:7:0:-18.05:18.15\n1\t74835106\t17796:2\tC\tC[1:65345199[\t56\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=17796:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:65345199(-)-1:74835106(+)__1_74823001_74848001D;SPAN=9489907;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:19:7:5.1:56.1,5.1,0:0:19:-56.11:56.11\n1\t79184460\t18692:1\tA\t]1:79184589]A\t51\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=18692:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_79184001_79209001_0C;SPAN=129;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:18:28:18.5:51.5,0,18.5:18:0:-52.37:52.37\n1\t79184589\t18692:2\tA\tA[1:79184460[\t51\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=18692:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_79184001_79209001_0C;SPAN=129;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:18:28:18.5:51.5,0,18.5:18:0:-52.37:52.37\n1\t79756214\t18804:1\tG\tG[1:79757394[\t42\tPASS\tDISC_MAPQ=49;EVDNC=DSCRD;IMPRECISE;MAPQ=49;MATEID=18804:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:79756214(+)-1:79757394(-)__1_79747501_79772501D;SPAN=1180;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:14:7:3.9:42.9,3.9,0:0:14:-42.91:42.91\n1\t79757394\t18804:2\tC\t]1:79756214]C\t42\tPASS\tDISC_MAPQ=59;EVDNC=DSCRD;IMPRECISE;MAPQ=59;MATEID=18804:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:79756214(+)-1:79757394(-)__1_79747501_79772501D;SPAN=1180;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:14:7:3.9:42.9,3.9,0:0:14:-42.91:42.91\n1\t81194666\t19073:1\tT\tT]1:81195873]\t69\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TTT;MAPQ=60;MATEID=19073:2;MATENM=1;NM=6;NUMPARTS=2;SCTG=c_1_81193001_81218001_6C;SPAN=1207;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:23:21:6.3:69.3,6.3,0:19:4:-69.32:69.32\n1\t81194672\t19074:1\tC\t[1:81195686[C\t24\tPASS\tEVDNC=ASSMB;INSERTION=ATTTTAAATTATTAAAAAA;MAPQ=60;MATEID=19074:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_81193001_81218001_0C;SPAN=1014;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:18:18.2:24.8,0,18.2:9:0:-24.67:24.67\n1\t81195686\t19074:2\tT\t[1:81194672[T\t24\tPASS\tEVDNC=ASSMB;INSERTION=ATTTTAAATTATTAAAAAA;MAPQ=60;MATEID=19074:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_81193001_81218001_0C;SPAN=1014;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:18:18.2:24.8,0,18.2:9:0:-24.67:24.67\n1\t81195873\t19073:2\tA\tA]1:81194666]\t69\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TTT;MAPQ=60;MATEID=19073:1;MATENM=6;NM=1;NUMPARTS=2;SCTG=c_1_81193001_81218001_6C;SPAN=1207;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:23:21:6.3:69.3,6.3,0:19:4:-69.32:69.32\n1\t82660293\t19398:1\tC\tC[1:82661887[\t42\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AAAAAAAATGGTTCATGC;MAPQ=60;MATEID=19398:2;MATENM=3;NM=5;NUMPARTS=2;SCTG=c_1_82638501_82663501_1C;SPAN=1594;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:14:7:3.9:42.9,3.9,0:10:9:-42.91:42.91\n1\t82661887\t19398:2\tA\t]1:82660293]A\t42\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AAAAAAAATGGTTCATGC;MAPQ=60;MATEID=19398:1;MATENM=5;NM=3;NUMPARTS=2;SCTG=c_1_82638501_82663501_1C;SPAN=1594;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:14:7:3.9:42.9,3.9,0:10:9:-42.91:42.91\n1\t83390671\t407388:1\tA\t]7:76846695]A\t16\tPASS\tDISC_MAPQ=43;EVDNC=DSCRD;IMPRECISE;MAPQ=43;MATEID=407388:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:83390671(-)-7:76846695(+)__7_76832001_76857001D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:35:16.7:16.7,0,69.5:0:8:-16.57:18.51\n1\t83390908\t407389:1\tT\tT[7:76847406[\t47\tPASS\tDISC_MAPQ=58;EVDNC=DSCRD;IMPRECISE;MAPQ=58;MATEID=407389:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:83390908(+)-7:76847406(-)__7_76832001_76857001D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:17:32:30.8:47.3,0,30.8:0:17:-47.25:47.25\n1\t83426016\t407403:1\tG\t]7:76882570]G\t25\tPASS\tDISC_MAPQ=54;EVDNC=DSCRD;IMPRECISE;MAPQ=54;MATEID=407403:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:83426016(-)-7:76882570(+)__7_76881001_76906001D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:15:12.2:25.4,0,12.2:0:9:-25.74:25.74\n1\t83590531\t19632:1\tT\t]1:83591652]T\t69\tPASS\tEVDNC=ASSMB;INSERTION=TATCAA;MAPQ=60;MATEID=19632:2;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_1_83569501_83594501_12C;SPAN=1121;SVTYPE=B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AN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:35:38:10.5:115.5,10.5,0:22:32:-114.4:114.4\n1\t107577023\t885591:1\tA\tA[20:53413597[\t69\tPASS\tEVDNC=ASSMB;INSERTION=GTAAATA;MAPQ=60;MATEID=885591:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_53410001_53435001_13C;SPAN=-1;SUBN=3;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:21:23:6.3:69.3,6.3,0:21:0:-68.32:68.32\n1\t107584696\t27430:1\tC\t[1:113807900[C\t58\tPASS\tDISC_MAPQ=255;EVDNC=ASDIS;HOMSEQ=TG;MAPQ=60;MATEID=27430:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_113802501_113827501_116C;SPAN=6223204;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:24:75:58.1:58.1,0,130.7:7:17:-58.14:59.68\n1\t107860352\t25484:1\tT\tT[1:107862863[\t50\tPASS\tEVDNC=ASSMB;HOMSEQ=ATT;MAPQ=60;MATEID=25484:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_107849001_107874001_69C;SPAN=2511;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:21:69:50:50,0,122.6:21:0:-49.93:51.66\n1\t107862863\t25484:2\tA\t]1:107860352]A\t50\tPASS\tEVDNC=ASSMB;HOMSEQ=ATT;MAPQ=60;MATEID=25484:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_107849001_107874001_69C;SPAN=2511;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:21:69:50:50,0,122.6:21:0:-49.93:51.66\n1\t108105777\t25624:2\tC\t]1:106886633]C\t99\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=25624:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_108094001_108119001_64C;SPAN=1219144;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:38:72:75.5:105.2,0,75.5:38:0:-105.4:105.4\n1\t108106953\t25634:1\tC\tC[20:47414043[\t76\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=25634:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_108094001_108119001_99C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:27:46:36.8:76.4,0,36.8:27:0:-76.82:76.82\n1\t108824497\t25945:1\tT\tT[1:108829337[\t29\tPASS\tDISC_MAPQ=54;EVDNC=DSCRD;IMPRECISE;MAPQ=54;MATEID=25945:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:108824497(+)-1:108829337(-)__1_108829001_108854001D;SPAN=4840;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:10:12:0:29.7,0,0:0:10:-31.35:31.35\n1\t108829337\t25945:2\tT\t]1:108824497]T\t29\tPASS\tDISC_MAPQ=49;EVDNC=DSCRD;IMPRECISE;MAPQ=49;MATEID=25945:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:108824497(+)-1:108829337(-)__1_108829001_108854001D;SPAN=4840;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:10:12:0:29.7,0,0:0:10:-31.35:31.35\n1\t108952236\t184409:1\tT\t]3:110694547]T\t89\tPASS\tEVDNC=ASSMB;INSERTION=TTGCAG;MAPQ=60;MATEID=184409:2;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_3_110691001_110716001_3C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:29:12:8.1:89.1,8.1,0:29:0:-89.12:89.12\n1\t109030610\t25996:1\tT\tT[1:109032559[\t43\tPASS\tEVDNC=ASSMB;HOMSEQ=T;MAPQ=60;MATEID=25996:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_109025001_109050001_35C;SPAN=1949;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:15:23:13.4:43.1,0,13.4:15:0:-43.8:43.8\n1\t109032559\t25996:2\tT\t]1:109030610]T\t43\tPASS\tEVDNC=ASSMB;HOMSEQ=T;MAPQ=60;MATEID=25996:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_109025001_109050001_35C;SPAN=1949;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:15:23:13.4:43.1,0,13.4:15:0:-43.8:43.8\n1\t109194083\t508919:1\tT\t[9:104854285[T\t44\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;INSERTION=AATGTCTCCAGGACATTTTTGTATA;MAPQ=60;MATEID=508919:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_104835501_104860501_16C;SPAN=-1;SUBN=8;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:15:20:4.4:44,0,4.4:12:10:-45.49:45.49\n1\t109198402\t504384:1\tC\tC[9:89437208[\t42\tPASS\tEVDNC=ASSMB;INSERTION=ACCATATATATAAATGTATGGCTGGAGA;MAPQ=60;MATEID=504384:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_89425001_89450001_6C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:15:25:19.4:42.5,0,19.4:15:0:-42.9:42.9\n1\t111822912\t809881:1\tT\t[17:58962856[T\t99\tPASS\tDISC_MAPQ=255;EVDNC=ASDIS;HOMSEQ=GA;MAPQ=60;MATEID=809881:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_17_58947001_58972001_6C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:50:105:99:135.5,0,128.9:34:28:-135.5:135.5\n1\t111868101\t26772:2\tG\tG[1:107060056[\t27\tPASS\tEVDNC=ASSMB;HOMSEQ=TG;MAPQ=60;MATEID=26772:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_111867001_111892001_5C;SPAN=4808045;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:16:92:27.2:27.2,0,202.1:16:0:-26.96:34.89\n1\t112292483\t26890:1\tA\tA[1:112295044[\t92\tPASS\tEVDNC=ASSMB;HOMSEQ=AAAAGAGGACACAAACAA;MAPQ=60;MATEID=26890:2;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_1_112283501_112308501_38C;SPAN=2561;SUBN=1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:30:16:8.4:92.4,8.4,0:30:0:-92.42:92.42\n1\t112295044\t26890:2\tA\t]1:112292483]A\t92\tPASS\tEVDNC=ASSMB;HOMSEQ=AAAAGAGGACACAAACAA;MAPQ=60;MATEID=26890:1;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_1_112283501_112308501_38C;SPAN=2561;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:30:16:8.4:92.4,8.4,0:30:0:-92.42:92.42\n1\t113068804\t27110:1\tC\tC[1:113071155[\t72\tPASS\tDISC_MAPQ=54;EVDNC=DSCRD;IMPRECISE;MAPQ=54;MATEID=27110:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:113068804(+)-1:113071155(-)__1_113067501_113092501D;SPAN=2351;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:24:9:6.6:72.6,6.6,0:0:24:-72.62:72.62\n1\t113071155\t27110:2\tA\t]1:113068804]A\t72\tPASS\tDISC_MAPQ=58;EVDNC=DSCRD;IMPRECISE;MAPQ=58;MATEID=27110:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:113068804(+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;MAPQ=20;MATEID=33738:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:123508702(-)-1:124397084(+)__1_124386501_124411501D;SPAN=888382;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:19:21.2:21.2,0,24.5:0:8:-21.07:21.11\n1\t124801523\t34161:1\tG\t]1:124809210]G\t33\tPASS\tDISC_MAPQ=23;EVDNC=DSCRD;IMPRECISE;MAPQ=23;MATEID=34161:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:124801523(-)-1:124809210(+)__1_124803001_124828001D;SPAN=7687;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:11:1:3:33,3,0:0:11:-33.01:33.01\n1\t124809210\t34161:2\tC\tC[1:124801523[\t33\tPASS\tDISC_MAPQ=24;EVDNC=DSCRD;IMPRECISE;MAPQ=24;MATEID=34161:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:124801523(-)-1:124809210(+)__1_124803001_124828001D;SPAN=7687;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:11:1:3:33,3,0:0:11:-33.01:33.01\n1\t124977945\t34306:1\tN\tN[1:124978327[\t99\tPASS\tDISC_MAPQ=255;EVDNC=TSI_G;INSERTION=GCCGGAAATTGCTCCAAGCATCCACCTACATATCCTGCAAAGAAACTGTTTCTAAACAGCTCTCTCAAGAGGAAGGTGCAGCTCTGTGAGTTGAATGCACACATCACAAACAAATTCCTGAGAATGCTTCTGTCTAGTTTTTCTGTGAAGATATTTCCTTTTCCAACATAGGCTTCAAATCGCTCCAAATATCCAATTGCAGATTCTGCAAAAAGATTGTTT;MAPQ=60;MATEID=34306:2;MATENM=0;NM=1;NUMPARTS=3;SCTG=c_1_124974501_124999501_30C;SPAN=382;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:40:8:11.1:122.1,11.1,0:40:0:-122.1:122.1\n1\t124978327\t34306:2\tC\t]1:124977945]C\t99\tPASS\tDISC_MAPQ=255;EVDNC=TSI_G;INSERTION=GCCGGAAATTGCTCCAAGCATCCACCTACATATCCTGCAAAGAAACTGTTTCTAAACAGCTCTCTCAAGAGGAAGGTGCAGCTCTGTGAGTTGAATGCACACATCACAAACAAATTCCTGAGAATGCTTCTGTCTAGTTTTTCTGTGAAGATATTTCCTTTTCCAACATAGGCTTCAAATCGCTCCAAATATCCAATTGCAGATTCTGCAAAAAGATTGTTT;MAPQ=60;MATEID=34306:1;MATENM=1;NM=0;NUMPARTS=3;SCTG=c_1_124974501_124999501_30C;SPAN=382;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:40:8:11.1:122.1,11.1,0:40:0:-122.1:122.1\n1\t125080586\t34586:1\tC\t]1:125080769]C\t0\tPASS\tEVDNC=ASSMB;HOMSEQ=CATTCGAGTCCATT;MAPQ=60;MATEID=34586:2;MATENM=6;NM=3;NUMPARTS=2;SCTG=c_1_125072501_125097501_328C;SPAN=183;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/0:8:299:57.5:0,57.5,868.1:8:0:57.64:10.7\n1\t125080769\t34586:2\tT\tT[1:125080586[\t0\tPASS\tEVDNC=ASSMB;HOMSEQ=CATTCGAGTCCATT;MAPQ=36;MATEID=34586:1;MATENM=3;NM=6;NUMPARTS=2;SCTG=c_1_125072501_125097501_328C;SPAN=183;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/0:8:299:57.5:0,57.5,868.1:8:0:57.64:10.7\n1\t143864342\t35280:1\tT\tT]1:207739629]\t36\tPASS\tDISC_MAPQ=4;EVDNC=ASDIS;INSERTION=CTCC;MAPQ=17;MATEID=35280:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_143864001_143889001_6C;SPAN=63875287;SUBN=2;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:12:9:3.3:36.3,3.3,0:9:6:-36.31:36.31\n1\t145815067\t36638:1\tG\t]1:148070222]G\t20\tPASS\tDISC_MAPQ=57;EVDNC=DSCRD;IMPRECISE;MAPQ=57;MATEID=36638:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:145815067(-)-1:148070222(+)__1_148053501_148078501D;SPAN=2255155;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:23:20:20,0,36.5:0:8:-19.94:20.25\n1\t147652890\t36513:1\tG\t]1:147653211]G\t17\tPASS\tDISC_MAPQ=11;EVDNC=ASDIS;HOMSEQ=GATCTCGGCTCACTGCAA;MAPQ=44;MATEID=36513:2;MATENM=4;NM=1;NUMPARTS=2;SCTG=c_1_147637001_147662001_6C;SPAN=321;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:45:17:17,0,96.2:9:2:-17.06:20.24\n1\t147653211\t36513:2\tA\tA[1:147652890[\t17\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=GATCTCGGCTCACTGCAA;MAPQ=60;MATEID=36513:1;MATENM=1;NM=4;NUMPARTS=2;SCTG=c_1_147637001_147662001_6C;SPAN=321;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:45:17:17,0,96.2:9:2:-17.06:20.24\n1\t148070222\t36638:2\tT\tT[1:145815067[\t20\tPASS\tDISC_MAPQ=41;EVDNC=DSCRD;IMPRECISE;MAPQ=41;MATEID=36638:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:145815067(-)-1:148070222(+)__1_148053501_148078501D;SPAN=2255155;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:23:20:20,0,36.5:0:8:-19.94:20.25\n1\t150621245\t295608:1\tC\t[5:56152290[C\t26\tPASS\tDISC_MAPQ=51;EVDNC=DSCRD;IMPRECISE;MAPQ=51;MATEID=295608:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:150621245(-)-5:56152290(-)__5_56129501_56154501D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:12:3.2:26.3,0,3.2:0:9:-27.29:27.29\n1\t150718975\t37741:1\tT\tT[1:150719294[\t99\tPASS\tEVDNC=ASSMB;HOMSEQ=AGAATTCTCAATTAAT;MAPQ=60;MATEID=37741:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_150699501_150724501_40C;SPAN=319;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:53:35:14.7:161.7,14.7,0:53:0:-161.7:161.7\n1\t150719294\t37741:2\tA\t]1:150718975]A\t99\tPASS\tEVDNC=ASSMB;HOMSEQ=AGAATTCTCAATTAAT;MAPQ=60;MATEID=37741:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_150699501_150724501_40C;SPAN=319;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:53:35:14.7:161.7,14.7,0:53:0:-161.7:161.7\n1\t151211760\t38014:1\tC\tC[1:151212045[\t0\tPASS\tEVDNC=ASSMB;HOMSEQ=GAGCTTGCAGTGAGCCAAGATC;MAPQ=60;MATEID=38014:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_151189501_151214501_60C;SPAN=285;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/0:4:55:2.1:0,2.1,141.9:4:0:2.256:7.112\n1\t151212045\t38014:2\tG\t]1:151211760]G\t0\tPASS\tEVDNC=ASSMB;HOMSEQ=GAGCTTGCAGTGAGCCAAGATC;MAPQ=60;MATEID=38014:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_151189501_151214501_60C;SPAN=285;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/0:4:55:2.1:0,2.1,141.9:4:0:2.256:7.112\n1\t151938858\t38348:1\tT\tT[1:151939885[\t10\tPASS\tEVDNC=ASSMB;HOMSEQ=CT;MAPQ=60;MATEID=38348:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_151924501_151949501_25C;SPAN=1027;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:69:10.4:10.4,0,162.2:9:0:-10.31:18.4\n1\t151939885\t38348:2\tC\t]1:151938858]C\t10\tPASS\tEVDNC=ASSMB;HOMSEQ=CT;MAPQ=60;MATEID=38348:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_151924501_151949501_25C;SPAN=1027;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:69:10.4:10.4,0,162.2:9:0:-10.31:18.4\n1\t151974841\t38399:1\tG\t]1:152087871]G\t26\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=38399:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:151974841(-)-1:152087871(+)__1_152071501_152096501D;SPAN=113030;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:25:26:26,0,35.9:0:10:-25.98:26.09\n1\t152087871\t38399:2\tT\tT[1:151974841[\t26\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=38399:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:151974841(-)-1:152087871(+)__1_152071501_152096501D;SPAN=113030;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:25:26:26,0,35.9:0:10:-25.98:26.09\n1\t152213285\t38428:1\tA\tA[1:152214664[\t99\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=GAGCCAGACCCATGTTGGCCGTAGCTGGAAGA;MAPQ=60;MATEID=38428:2;MATENM=0;NM=3;NUMPARTS=2;SCTG=c_1_152194001_152219001_88C;SPAN=1379;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:46:157:99:107.9,0,286.1:30:17:-107.7:112.3\n1\t152214664\t38428:2\tG\t]1:152213285]G\t99\tPASS\tDISC_MAPQ=0;EVDNC=ASDIS;HOMSEQ=GAGCCAGACCCATGTTGGCCGTAGCTGGAAGA;MAPQ=60;MATEID=38428:1;MATENM=3;NM=0;NUMPARTS=2;SCTG=c_1_152194001_152219001_88C;SPAN=1379;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:46:157:99:107.9,0,286.1:30:17:-107.7:112.3\n1\t152583177\t38584:1\tG\tG[1:152615264[\t99\tPASS\tDISC_MAPQ=52;EVDNC=DSCRD;IMPRECISE;MAPQ=52;MATEID=38584:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:152583177(+)-1:152615264(-)__1_152610501_152635501D;SPAN=32087;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:33:4:9:99,9,0:0:33:-99.02:99.02\n1\t152615264\t38584:2\tT\t]1:152583177]T\t99\tPASS\tDISC_MAPQ=16;EVDNC=DSCRD;IMPRECISE;MAPQ=16;MATEID=38584:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:152583177(+)-1:152615264(-)__1_152610501_152635501D;SPAN=32087;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:33:4:9:99,9,0:0:33:-99.02:99.02\n1\t153070710\t38737:1\tG\tG[1:153093702[\t23\tPASS\tDISC_MAPQ=45;EVDNC=DSCRD;IMPRECISE;MAPQ=45;MATEID=38737:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:153070710(+)-1:153093702(-)__1_153051501_153076501D;SPAN=22992;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:10:0.5:23.6,0,0.5:0:8:-24.74:24.74\n1\t153071239\t38741:1\tG\t]1:153094217]G\t19\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=38741:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:153071239(-)-1:153094217(+)__1_153076001_153101001D;SPAN=22978;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:24:19.7:19.7,0,39.5:0:8:-19.66:20.07\n1\t153093702\t38737:2\tA\t]1:153070710]A\t23\tPASS\tDISC_MAPQ=44;EVDNC=DSCRD;IMPRECISE;MAPQ=44;MATEID=38737:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:153070710(+)-1:153093702(-)__1_153051501_153076501D;SPAN=22992;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:10:0.5:23.6,0,0.5:0:8:-24.74:24.74\n1\t153094217\t38741:2\tG\tG[1:153071239[\t19\tPASS\tDISC_MAPQ=55;EVDNC=DSCRD;IMPRECISE;MAPQ=55;MATEID=38741:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:153071239(-)-1:153094217(+)__1_153076001_153101001D;SPAN=22978;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:24:19.7:19.7,0,39.5:0:8:-19.66:20.07\n1\t153161232\t38758:1\tA\tA[1:153161488[\t99\tPASS\tEVDNC=ASSMB;HOMSEQ=TA;MAPQ=60;MATEID=38758:2;MATENM=4;NM=0;NUMPARTS=2;SCTG=c_1_153149501_153174501_38C;SPAN=256;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:39:17:10.8:118.8,10.8,0:39:0:-118.8:118.8\n1\t153161488\t38758:2\tT\t]1:153161232]T\t99\tPASS\tEVDNC=ASSMB;HOMSEQ=TA;MAPQ=60;MATEID=38758:1;MATENM=0;NM=4;NUMPARTS=2;SCTG=c_1_153149501_153174501_38C;SPAN=256;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:39:17:10.8:118.8,10.8,0:39:0:-118.8:118.8\n1\t154713957\t39323:1\tC\t]1:154714620]C\t44\tPASS\tDISC_MAPQ=32;EVDNC=DSCRD;IMPRECISE;MAPQ=32;MATEID=39323:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:154713957(-)-1:154714620(+)__1_154693001_154718001D;SPAN=663;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:17:40:44.9:44.9,0,54.8:0:17:-44.87:44.94\n1\t154714620\t39323:2\tT\tT[1:154713957[\t44\tPASS\tDISC_MAPQ=21;EVDNC=DSCRD;IMPRECISE;MAPQ=21;MATEID=39323:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:154713957(-)-1:154714620(+)__1_154693001_154718001D;SPAN=663;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:17:40:44.9:44.9,0,54.8:0:17:-44.87:44.94\n1\t155147370\t39479:1\tA\t]1:155147439]A\t78\tPASS\tDISC_MAPQ=255;EVDNC=TSI_G;HOMSEQ=AATAGATACATATTTAAATATGTAT;INSERTION=AATATGTATCTATTTAATAGATACATATATATGTATCTATTTAATAGATACATATATATGTATCTATTTAATAGATACATAAATATGTATCTATTTAATAGATACATATTTAAGTATCTATTT;MAPQ=60;MATEID=39479:2;MATENM=4;NM=4;NUMPARTS=4;SCTG=c_1_155134001_155159001_119C;SPAN=69;SUBN=2;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:29:62:75.2:78.5,0,75.2:29:0:-78.3:78.3\n1\t155147439\t39479:2\tA\tA[1:155147370[\t78\tPASS\tDISC_MAPQ=255;EVDNC=TSI_G;HOMSEQ=AATAGATACATATTTAAATATGTAT;INSERTION=AATATGTATCTATTTAATAGATACATATATATGTATCTATTTAATAGATACATATATATGTATCTATTTAATAGATACATAAATATGTATCTATTTAATAGATACATATTTAAGTATCTATTT;MAPQ=60;MATEID=39479:1;MATENM=4;NM=4;NUMPARTS=4;SCTG=c_1_155134001_155159001_119C;SPAN=69;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:29:62:75.2:78.5,0,75.2:29:0:-78.3:78.3\n1\t155531284\t39855:1\tG\t]1:156495760]G\t33\tPASS\tEVDNC=ASSMB;HOMSEQ=G;MAPQ=60;MATEID=39855:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_1_156481501_156506501_9C;SPAN=964476;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:11:11:3:33,3,0:11:0:-33.01:33.01\n1\t156495760\t39855:2\tG\tG[1:155531284[\t33\tPASS\tEVDNC=ASSMB;HOMSEQ=G;MAPQ=60;MATEID=39855:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_1_156481501_156506501_9C;SPAN=964476;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:11:11:3:33,3,0:11:0:-33.01:33.01\n1\t156556931\t39879:1\tC\tC[1:156559144[\t46\tPASS\tEVDNC=ASSMB;HOMSEQ=AGAAATTGAGTAGCTCAGC;MAPQ=60;MATEID=39879:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_1_156555001_156580001_74C;SPAN=2213;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:16:16:4.2:46.2,4.2,0:16:0:-46.21:46.21\n1\t156559144\t39879:2\tA\t]1:156556931]A\t46\tPASS\tEVDNC=ASSMB;HOMSEQ=AGAAATTGAGTAGCTCAGC;MAPQ=60;MATEID=39879:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_1_156555001_156580001_74C;SPAN=2213;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:16:16:4.2:46.2,4.2,0:16:0:-46.21:46.21\n1\t157204074\t40074:1\tA\tA[1:157205607[\t23\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;INSERTION=TTTTATCAAATTT;MAPQ=60;MATEID=40074:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_157192001_157217001_10C;SPAN=1533;SUBN=5;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:21:23.9:23.9,0,27.2:6:5:-23.81:23.84\n1\t157205607\t40074:2\tA\t]1:157204074]A\t23\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;INSERTION=TTTTATCAAATTT;MAPQ=60;MATEID=40074:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_157192001_157217001_10C;SPAN=1533;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:21:23.9:23.9,0,27.2:6:5:-23.81:23.84\n1\t157570871\t40199:1\tA\tA[1:157571087[\t21\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=40199:2;MATENM=1;NM=2;NUMPARTS=2;SCTG=c_1_157559501_157584501_117C;SPAN=216;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:17:18.5:21.8,0,18.5:8:0:-21.63:21.63\n1\t157571087\t40199:2\tT\t]1:157570871]T\t21\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=40199:1;MATENM=2;NM=1;NUMPARTS=2;SCTG=c_1_157559501_157584501_117C;SPAN=216;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:17:18.5:21.8,0,18.5:8:0:-21.63:21.63\n1\t157699943\t318970:1\tA\tA[5:169468974[\t28\tPASS\tEVDNC=ASSMB;HOMSEQ=A;MAPQ=60;MATEID=318970:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_5_169466501_169491501_22C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:15:8.9:28.7,0,8.9:10:0:-29.37:29.37\n1\t158108318\t46063:1\tC\t[1:178946978[C\t95\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=CA;MAPQ=60;MATEID=46063:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_1_178923501_178948501_7C;SPAN=20838660;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:32:19:8.7:95.7,8.7,0:17:19:-95.72:95.72\n1\t158441289\t45917:1\tA\tA]1:178096153]\t37\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=45917:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:158441289(+)-1:178096153(+)__1_178090501_178115501D;SPAN=19654864;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:20:11:37.4,0,11:0:13:-37.93:37.93\n1\t158991664\t40561:1\tA\tA[1:158996411[\t46\tPASS\tDISC_MAPQ=50;EVDNC=DSCRD;IMPRECISE;MAPQ=50;MATEID=40561:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:158991664(+)-1:158996411(-)__1_158980501_159005501D;SPAN=4747;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:15:3:4.2:46.2,4.2,0:0:15:-46.21:46.21\n1\t158996411\t40561:2\tT\t]1:158991664]T\t46\tPASS\tDISC_MAPQ=55;EVDNC=DSCRD;IMPRECISE;MAPQ=55;MATEID=40561:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:158991664(+)-1:158996411(-)__1_158980501_159005501D;SPAN=4747;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:15:3:4.2:46.2,4.2,0:0:15:-46.21:46.21\n1\t159050757\t40583:1\tT\tT[1:159051098[\t95\tPASS\tDISC_MAPQ=255;EVDNC=TSI_L;INSERTION=GTCCCCTCCCGCCTAATTTTTCACGTCCATGACTCTTTTTAGTTCCTGCCATTATTCAGATTGGAGAGCCTCTAACCTGGGCCCCTTCAGATTAGGAAAGTTTGTGGAGTCTTCCAGTGGCTGCCTTAATGATGTTTTTGCAACATAGTGCTGCTTCATTAGAAAGGGCTTTGCAATTTGGTTCTTTAAAATGCCCCTATCTACTAGAATGAGTTCCAACTGAAATCTCATGAAATCTAAGGTTTGTGGTTGAGACTATTCCTTACTCTGAATGCTAGTAATATGATTTTTTTCTCTATTTTTATTTTATTTGGTCACTGTCATATTAGGCAGGAGGGA;MAPQ=60;MATEID=40583:2;MATENM=6;NM=6;NUMPARTS=3;SCTG=c_1_159029501_159054501_5C;SPAN=341;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:32:21:8.7:95.7,8.7,0:32:0:-95.72:95.72\n1\t159051098\t40583:2\tT\t]1:159050757]T\t95\tPASS\tDISC_MAPQ=255;EVDNC=TSI_L;INSERTION=GTCCCCTCCCGCCTAATTTTTCACGTCCATGACTCTTTTTAGTTCCTGCCATTATTCAGATTGGAGAGCCTCTAACCTGGGCCCCTTCAGATTAGGAAAGTTTGTGGAGTCTTCCAGTGGCTGCCTTAATGATGTTTTTGCAACATAGTGCTGCTTCATTAGAAAGGGCTTTGCAATTTGGTTCTTTAAAATGCCCCTATCTACTAGAATGAGTTCCAACTGAAATCTCATGAAATCTAAGGTTTGTGGTTGAGACTATTCCTTACTCTGAATGCTAGTAATATGATTTTTTTCTCTATTTTTATTTTATTTGGTCACTGTCATATTAGGCAGGAGGGA;MAPQ=60;MATEID=40583:1;MATENM=6;NM=6;NUMPARTS=3;SCTG=c_1_159029501_159054501_5C;SPAN=341;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:32:21:8.7:95.7,8.7,0:32:0:-95.72:95.72\n1\t161481848\t41076:1\tG\tG[1:161487634[\t25\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=41076:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:161481848(+)-1:161487634(-)__1_161479501_161504501D;SPAN=5786;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:14:9.2:25.7,0,9.2:0:9:-26.19:26.19\n1\t161487634\t41076:2\tA\t]1:161481848]A\t25\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=41076:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:161481848(+)-1:161487634(-)__1_161479501_161504501D;SPAN=5786;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:14:9.2:25.7,0,9.2:0:9:-26.19:26.19\n1\t165582917\t42054:1\tT\tT[1:165583115[\t39\tPASS\tDISC_MAPQ=255;EVDNC=TSI_L;HOMSEQ=TATGTGTATACATATACACATATATGT;MAPQ=60;MATEID=42054:2;MATENM=0;NM=5;NUMPARTS=3;REPSEQ=TGTG;SCTG=c_1_165571001_165596001_23C;SPAN=198;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:13:7:3.6:39.6,3.6,0:13:0:-39.61:39.61\n1\t165583115\t42054:2\tT\t]1:165582917]T\t39\tPASS\tDISC_MAPQ=255;EVDNC=TSI_L;HOMSEQ=TATGTGTATACATATACACATATATGT;MAPQ=60;MATEID=42054:1;MATENM=5;NM=0;NUMPARTS=3;REPSEQ=TGTG;SCTG=c_1_165571001_165596001_23C;SPAN=198;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:13:7:3.6:39.6,3.6,0:13:0:-39.61:39.61\n1\t166564699\t42673:1\tA\t[1:168370833[A\t49\tPASS\tDISC_MAPQ=51;EVDNC=ASDIS;HOMSEQ=A;MAPQ=60;MATEID=42673:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_168364001_168389001_45C;SPAN=1806134;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:16:17:4.5:49.5,4.5,0:15:7:-49.51:49.51\n1\t167056589\t42402:1\tA\t]1:167057025]A\t44\tPASS\tDISC_MAPQ=29;EVDNC=DSCRD;IMPRECISE;MAPQ=29;MATEID=42402:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:167056589(-)-1:167057025(+)__1_167041001_167066001D;SPAN=436;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:17:41:44.6:44.6,0,57.8:0:17:-44.59:44.7\n1\t167057025\t42402:2\tG\tG[1:167056589[\t44\tPASS\tDISC_MAPQ=19;EVDNC=DSCRD;IMPRECISE;MAPQ=19;MATEID=42402:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:167056589(-)-1:167057025(+)__1_167041001_167066001D;SPAN=436;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:17:41:44.6:44.6,0,57.8:0:17:-44.59:44.7\n1\t167120498\t861891:1\tA\tA[20:6681439[\t62\tPASS\tEVDNC=ASSMB;HOMSEQ=A;MAPQ=60;MATEID=861891:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_6664001_6689001_24C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:21:17:5.7:62.7,5.7,0:21:0:-62.72:62.72\n1\t168370833\t42673:2\tT\t[1:166564699[T\t49\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=A;MAPQ=60;MATEID=42673:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_168364001_168389001_45C;SPAN=1806134;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:16:17:4.5:49.5,4.5,0:15:7:-49.51:49.51\n1\t168543261\t42725:1\tC\t[1:168578878[C\t21\tPASS\tDISC_MAPQ=22;EVDNC=DSCRD;IMPRECISE;MAPQ=22;MATEID=42725:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:168543261(-)-1:168578878(-)__1_168560001_168585001D;SPAN=35617;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:18:21.5:21.5,0,21.5:0:8:-21.35:21.36\n1\t168543770\t42721:1\tT\t[1:168576851[T\t22\tPASS\tDISC_MAPQ=46;EVDNC=DSCRD;IMPRECISE;MAPQ=46;MATEID=42721:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:168543770(-)-1:168576851(-)__1_168535501_168560501D;SPAN=33081;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:16:15.5:22.1,0,15.5:0:8:-21.93:21.93\n1\t168576851\t42721:2\tC\t[1:168543770[C\t22\tPASS\tDISC_MAPQ=36;EVDNC=DSCRD;IMPRECISE;MAPQ=36;MATEID=42721:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:168543770(-)-1:168576851(-)__1_168535501_168560501D;SPAN=33081;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:16:15.5:22.1,0,15.5:0:8:-21.93:21.93\n1\t168578878\t42725:2\tC\t[1:168543261[C\t21\tPASS\tDISC_MAPQ=58;EVDNC=DSCRD;IMPRECISE;MAPQ=58;MATEID=42725:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:168543261(-)-1:168578878(-)__1_168560001_168585001D;SPAN=35617;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:18:21.5:21.5,0,21.5:0:8:-21.35:21.36\n1\t169035123\t42878:1\tG\tG[1:169035992[\t47\tPASS\tEVDNC=ASSMB;HOMSEQ=TGG;MAPQ=60;MATEID=42878:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_1_169025501_169050501_100C;SPAN=869;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:17:32:30.8:47.3,0,30.8:17:0:-47.25:47.25\n1\t169035992\t42878:2\tT\t]1:169035123]T\t47\tPASS\tEVDNC=ASSMB;HOMSEQ=TGG;MAPQ=60;MATEID=42878:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_1_169025501_169050501_100C;SPAN=869;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:17:32:30.8:47.3,0,30.8:17:0:-47.25:47.25\n1\t169190799\t42950:1\tT\tT[1:169191112[\t32\tPASS\tEVDNC=ASSMB;HOMSEQ=GCAAGTGAACTGTTTCT;MAPQ=60;MATEID=42950:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_169172501_169197501_174C;SPAN=313;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:25:29.3:32.6,0,29.3:12:0:-32.59:32.59\n1\t169191112\t42950:2\tG\t]1:169190799]G\t32\tPASS\tEVDNC=ASSMB;HOMSEQ=GCAAGTGAACTGTTTCT;MAPQ=60;MATEID=42950:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_169172501_169197501_174C;SPAN=313;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:25:29.3:32.6,0,29.3:12:0:-32.59:32.59\n1\t169993658\t43328:1\tT\t]1:169993838]T\t74\tPASS\tEVDNC=ASSMB;HOMSEQ=TTGCAGTGAGCCCAGAT;MAPQ=60;MATEID=43328:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_1_169981001_170006001_70C;SPAN=180;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:26:41:28.1:74.3,0,28.1:26:0:-75.39:75.39\n1\t169993838\t43328:2\tT\tT[1:169993658[\t74\tPASS\tEVDNC=ASSMB;HOMSEQ=TTGCAGTGAGCCCAGAT;MAPQ=60;MATEID=43328:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_1_169981001_170006001_70C;SPAN=180;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:26:41:28.1:74.3,0,28.1:26:0:-75.39:75.39\n1\t171021024\t43754:1\tA\t]1:171030867]A\t21\tPASS\tDISC_MAPQ=54;EVDNC=DSCRD;IMPRECISE;MAPQ=54;MATEID=43754:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:171021024(-)-1:171030867(+)__1_171010001_171035001D;SPAN=9843;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:40:21.8:21.8,0,77.9:0:10:-21.77:23.59\n1\t171030867\t43754:2\tA\tA[1:171021024[\t21\tPASS\tDISC_MAPQ=56;EVDNC=DSCRD;IMPRECISE;MAPQ=56;MATEID=43754:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:171021024(-)-1:171030867(+)__1_171010001_171035001D;SPAN=9843;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:40:21.8:21.8,0,77.9:0:10:-21.77:23.59\n1\t171547927\t43910:1\tA\tA[1:171548217[\t3\tPASS\tEVDNC=ASSMB;HOMSEQ=CCTTGGCCTCCCAAAGTGCTGGGATTA;MAPQ=60;MATEID=43910:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_171524501_171549501_63C;SPAN=290;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:5:47:3.5:3.5,0,112.4:5:0:-3.294:9.753\n1\t171548217\t43910:2\tC\t]1:171547927]C\t3\tPASS\tEVDNC=ASSMB;HOMSEQ=CCTTGGCCTCCCAAAGTGCTGGGATTA;MAPQ=60;MATEID=43910:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_171524501_171549501_63C;SPAN=290;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:5:47:3.5:3.5,0,112.4:5:0:-3.294:9.753\n1\t173886819\t44589:1\tA\t]1:173897273]A\t59\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=44589:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_173876501_173901501_80C;SPAN=10454;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:22:47:56.3:59.6,0,56.3:22:0:-59.41:59.41\n1\t173897273\t44589:2\tG\tG[1:173886819[\t59\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=44589:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_173876501_173901501_80C;SPAN=10454;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:22:47:56.3:59.6,0,56.3:22:0:-59.41:59.41\n1\t174178577\t44791:1\tG\t]1:174384561]G\t18\tPASS\tEVDNC=ASSMB;HOMSEQ=GA;MAPQ=60;MATEID=44791:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_1_174366501_174391501_27C;SPAN=205984;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:28:18.5:18.5,0,51.5:8:0:-18.54:19.42\n1\t174319638\t44748:1\tA\t]1:174320886]A\t4\tPASS\tDISC_MAPQ=34;EVDNC=ASDIS;HOMSEQ=AG;MAPQ=60;MATEID=44748:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_1_174317501_174342501_30C;SPAN=1248;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:6:55:4.4:4.4,0,133.1:3:6:-4.346:11.77\n1\t174320886\t44748:2\tG\tG[1:174319638[\t4\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AG;MAPQ=60;MATEID=44748:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_1_174317501_174342501_30C;SPAN=1248;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:6:55:4.4:4.4,0,133.1:3:6:-4.346:11.77\n1\t174384561\t44791:2\tA\tA[1:174178577[\t18\tPASS\tEVDNC=ASSMB;HOMSEQ=GA;MAPQ=60;MATEID=44791:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_1_174366501_174391501_27C;SPAN=205984;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:28:18.5:18.5,0,51.5:8:0:-18.54:19.42\n1\t174937737\t999349:1\tC\t[Un_JTFH01000855v1_decoy:1[C\t85\tPASS\tEVDNC=ASSMB;HOMSEQ=GCCAGCCTGGG;INSERTION=AAAATTAGCTGGGTCTGGTGGCACATG;MAPQ=60;MATEID=999349:2;MATENM=1;NM=1;NUMPARTS=9;SCTG=c_1698_1_1088_0C;SECONDARY;SPAN=-1;SUBN=1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:28:9:7.8:85.8,7.8,0:28:0:-85.82:85.82\n1\t175231392\t45123:1\tT\tT]1:175232880]\t20\tPASS\tDISC_MAPQ=31;EVDNC=DSCRD;IMPRECISE;MAPQ=31;MATEID=45123:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:175231392(+)-1:175232880(+)__1_175224001_175249001D;SPAN=1488;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:43:20.9:20.9,0,86.9:0:10:-20.92:23.23\n1\t175232880\t45123:2\tG\tG]1:175231392]\t20\tPASS\tDISC_MAPQ=57;EVDNC=DSCRD;IMPRECISE;MAPQ=57;MATEID=45123:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:175231392(+)-1:175232880(+)__1_175224001_175249001D;SPAN=1488;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:43:20.9:20.9,0,86.9:0:10:-20.92:23.23\n1\t178095595\t45920:1\tA\t]1:178102057]A\t34\tPASS\tEVDNC=ASSMB;HOMSEQ=ATG;MAPQ=60;MATEID=45920:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_1_178090501_178115501_73C;SPAN=6462;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:41:34.7:34.7,0,67.7:14:0:-34.69:35.3\n1\t178096153\t45917:2\tT\tT]1:158441289]\t37\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=45917:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:158441289(+)-1:178096153(+)__1_178090501_178115501D;SPAN=19654864;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:20:11:37.4,0,11:0:13:-37.93:37.93\n1\t178102057\t45920:2\tG\tG[1:178095595[\t34\tPASS\tEVDNC=ASSMB;HOMSEQ=ATG;MAPQ=60;MATEID=45920:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_1_178090501_178115501_73C;SPAN=6462;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:41:34.7:34.7,0,67.7:14:0:-34.69:35.3\n1\t178946978\t46063:2\tT\t[1:158108318[T\t95\tPASS\tDISC_MAPQ=56;EVDNC=ASDIS;HOMSEQ=CA;MAPQ=60;MATEID=46063:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_1_178923501_178948501_7C;SPAN=20838660;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:32:19:8.7:95.7,8.7,0:17:19:-95.72:95.72\n1\t179261094\t46195:1\tC\t]1:179301500]C\t14\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;INSERTION=CTCTTGGGCACA;MAPQ=60;MATEID=46195:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_179291001_179316001_27C;SPAN=40406;SUBN=3;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:6:20:14.3:14.3,0,34.1:3:4:-14.18:14.72\n1\t179301500\t46195:2\tG\tG[1:179261094[\t14\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;INSERTION=CTCTTGGGCACA;MAPQ=60;MATEID=46195:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_179291001_179316001_27C;SPAN=40406;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:6:20:14.3:14.3,0,34.1:3:4:-14.18:14.72\n1\t179638146\t46431:1\tA\tA[1:179638925[\t41\tPASS\tEVDNC=ASSMB;INSERTION=TCGTGGGTAAA;MAPQ=60;MATEID=46431:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_179634001_179659001_25C;SPAN=779;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:15:27:25.4:41.9,0,25.4:15:0:-42.12:42.12\n1\t179638925\t46431:2\tT\t]1:179638146]T\t41\tPASS\tEVDNC=ASSMB;INSERTION=TCGTGGGTAAA;MAPQ=60;MATEID=46431:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_179634001_179659001_25C;SPAN=779;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:15:27:25.4:41.9,0,25.4:15:0:-42.12:42.12\n1\t181698030\t47398:1\tG\tG[1:182409037[\t75\tPASS\tEVDNC=ASSMB;HOMSEQ=G;MAPQ=60;MATEID=47398:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_182402501_182427501_9C;SPAN=711007;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:25:12:6.9:75.9,6.9,0:25:0:-75.92:75.92\n1\t182409037\t47398:2\tG\t]1:181698030]G\t75\tPASS\tEVDNC=ASSMB;HOMSEQ=G;MAPQ=60;MATEID=47398:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_182402501_182427501_9C;SPAN=711007;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:25:12:6.9:75.9,6.9,0:25:0:-75.92:75.92\n1\t182451352\t47412:1\tG\t]1:182451475]G\t41\tPASS\tEVDNC=ASSMB;HOMSEQ=GAG;MAPQ=60;MATEID=47412:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_182427001_182452001_78C;SPAN=123;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:17:54:41:41,0,93.8:17:0:-40.94:42.13\n1\t182451475\t47412:2\tG\tG[1:182451352[\t41\tPASS\tEVDNC=ASSMB;HOMSEQ=GAG;MAPQ=60;MATEID=47412:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_182427001_182452001_78C;SPAN=123;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:17:54:41:41,0,93.8:17:0:-40.94:42.13\n1\t184309605\t47956:1\tG\tG[1:184309908[\t82\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AAGAAACTCTGATG;MAPQ=60;MATEID=47956:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_184289001_184314001_97C;SPAN=303;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:27:22:7.5:82.5,7.5,0:22:6:-82.52:82.52\n1\t184309908\t47956:2\tA\t]1:184309605]A\t82\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AAGAAACTCTGATG;MAPQ=60;MATEID=47956:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_184289001_184314001_97C;SPAN=303;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:27:22:7.5:82.5,7.5,0:22:6:-82.52:82.52\n1\t184845698\t48124:1\tT\tT[1:184851643[\t85\tPASS\tDISC_MAPQ=59;EVDNC=DSCRD;IMPRECISE;MAPQ=59;MATEID=48124:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:184845698(+)-1:184851643(-)__1_184828001_184853001D;SPAN=5945;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:28:10:7.8:85.8,7.8,0:0:28:-85.82:85.82\n1\t184851643\t48124:2\tT\t]1:184845698]T\t85\tPASS\tDISC_MAPQ=58;EVDNC=DSCRD;IMPRECISE;MAPQ=58;MATEID=48124:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:184845698(+)-1:184851643(-)__1_184828001_184853001D;SPAN=5945;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:28:10:7.8:85.8,7.8,0:0:28:-85.82:85.82\n1\t185403974\t48241:1\tC\tC[1:185404303[\t79\tPASS\tEVDNC=ASSMB;HOMSEQ=CCCAAGATTC;MAPQ=60;MATEID=48241:2;MATENM=7;NM=0;NUMPARTS=2;SCTG=c_1_185391501_185416501_69C;SPAN=329;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:26:26:7.2:79.2,7.2,0:26:0:-79.22:79.22\n1\t185404303\t48241:2\tC\t]1:185403974]C\t79\tPASS\tEVDNC=ASSMB;HOMSEQ=CCCAAGATTC;MAPQ=60;MATEID=48241:1;MATENM=0;NM=7;NUMPARTS=2;SCTG=c_1_185391501_185416501_69C;SPAN=329;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:26:26:7.2:79.2,7.2,0:26:0:-79.22:79.22\n1\t187495696\t48778:1\tT\tT[1:187497598[\t99\tPASS\tDISC_MAPQ=255;EVDNC=TSI_G;HOMSEQ=CCT;INSERTION=AATATGCTTTCTGTTTTTGGGTGTCACTCTCAATTTTTTTGAAACAATACATTTTTCCGTCTTACTTTAATTCATCCCTTGTCATCCATTTCTCATCCATTACATTCTAGCATTCATATCTATCCCTTCCCCACTGAAATCGATCTCACTAAGTCACTGATGTTCCCAAGTTTTTAACACAAGTTTCTGTCTTTGGTTTTCAGCCTAATTTTTTAGATATTACTACCAATAGAATGGTCTCCTGGATTT;MAPQ=60;MATEID=48778:2;MATENM=0;NM=3;NUMPARTS=3;SCTG=c_1_187474001_187499001_33C;SPAN=1902;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:75:28:21:231,21,0:75:0:-231.1:231.1\n1\t187495696\t48777:1\tT\tT]1:187497595]\t99\tPASS\tDISC_MAPQ=60;EVDNC=TSI_L;MAPQ=60;MATEID=48777:2;MATENM=0;NM=3;NUMPARTS=3;REPSEQ=ATAT;SCTG=c_1_187474001_187499001_33C;SPAN=1899;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:57:29:15.9:174.9,15.9,0:48:16:-174.9:174.9\n1\t187497344\t48780:1\tA\t[1:187497598[A\t95\tPASS\tDISC_MAPQ=255;EVDNC=TSI_L;HOMSEQ=CCT;MAPQ=60;MATEID=48780:2;MATENM=0;NM=0;NUMPARTS=3;SCTG=c_1_187474001_187499001_33C;SPAN=254;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:32:26:8.7:95.7,8.7,0:32:0:-95.72:95.72\n1\t187497595\t48777:2\tT\tT]1:187495696]\t99\tPASS\tDISC_MAPQ=60;EVDNC=TSI_L;MAPQ=60;MATEID=48777:1;MATENM=3;NM=0;NUMPARTS=3;REPSEQ=ATAT;SCTG=c_1_187474001_187499001_33C;SPAN=1899;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:57:29:15.9:174.9,15.9,0:48:16:-174.9:174.9\n1\t187497598\t48780:2\tC\t[1:187497344[C\t95\tPASS\tDISC_MAPQ=255;EVDNC=TSI_L;HOMSEQ=CCT;MAPQ=60;MATEID=48780:1;MATENM=0;NM=0;NUMPARTS=3;SCTG=c_1_187474001_187499001_33C;SPAN=254;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:32:26:8.7:95.7,8.7,0:32:0:-95.72:95.72\n1\t187497598\t48778:2\tC\t]1:187495696]C\t99\tPASS\tDISC_MAPQ=255;EVDNC=TSI_G;HOMSEQ=CCT;INSERTION=AATATGCTTTCTGTTTTTGGGTGTCACTCTCAATTTTTTTGAAACAATACATTTTTCCGTCTTACTTTAATTCATCCCTTGTCATCCATTTCTCATCCATTACATTCTAGCATTCATATCTATCCCTTCCCCACTGAAATCGATCTCACTAAGTCACTGATGTTCCCAAGTTTTTAACACAAGTTTCTGTCTTTGGTTTTCAGCCTAATTTTTTAGATATTACTACCAATAGAATGGTCTCCTGGATTT;MAPQ=60;MATEID=48778:1;MATENM=3;NM=0;NUMPARTS=3;SCTG=c_1_187474001_187499001_33C;SPAN=1902;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:75:28:21:231,21,0:75:0:-231.1:231.1\n1\t187746975\t48909:1\tA\tA[1:187753402[\t59\tPASS\tEVDNC=ASSMB;HOMSEQ=GA;MAPQ=60;MATEID=48909:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_187743501_187768501_130C;SPAN=6427;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:21:35:26.6:59.6,0,26.6:21:0:-60.07:60.07\n1\t187753402\t48909:2\tG\t]1:187746975]G\t59\tPASS\tEVDNC=ASSMB;HOMSEQ=GA;MAPQ=60;MATEID=48909:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_187743501_187768501_130C;SPAN=6427;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:21:35:26.6:59.6,0,26.6:21:0:-60.07:60.07\n1\t188015229\t49018:1\tC\t]1:188029002]C\t33\tPASS\tDISC_MAPQ=58;EVDNC=DSCRD;IMPRECISE;MAPQ=58;MATEID=49018:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:188015229(-)-1:188029002(+)__1_188013001_188038001D;SPAN=13773;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:47:33.2:33.2,0,82.7:0:14:-33:34.28\n1\t188029002\t49018:2\tA\tA[1:188015229[\t33\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=49018:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:188015229(-)-1:188029002(+)__1_188013001_188038001D;SPAN=13773;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:47:33.2:33.2,0,82.7:0:14:-33:34.28\n1\t188086594\t805051:1\tG\t[17:44048921[G\t49\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;INSERTION=AGC;MAPQ=60;MATEID=805051:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_17_44026501_44051501_18C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:17:15:4.5:49.5,4.5,0:13:9:-49.51:49.51\n1\t188238750\t49140:1\tT\tT[1:188238972[\t99\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;INSERTION=AAAATATAAAATATATATATATAAA;MAPQ=60;MATEID=49140:2;MATENM=2;NM=1;NUMPARTS=2;SCTG=c_1_188233501_188258501_22C;SPAN=222;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:33:12:9:99,9,0:29:4:-99.02:99.02\n1\t188238972\t49140:2\tA\t]1:188238750]A\t99\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;INSERTION=AAAATATAAAATATATATATATAAA;MAPQ=60;MATEID=49140:1;MATENM=1;NM=2;NUMPARTS=2;SCTG=c_1_188233501_188258501_22C;SPAN=222;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:33:12:9:99,9,0:29:4:-99.02:99.02\n1\t190868192\t50402:1\tT\tT[1:190868361[\t60\tPASS\tEVDNC=ASSMB;HOMSEQ=ATT;MAPQ=60;MATEID=50402:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_1_190855001_190880001_71C;SPAN=169;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:21:30:14.6:60.8,0,14.6:21:0:-62.47:62.47\n1\t190868361\t50402:2\tA\t]1:190868192]A\t60\tPASS\tEVDNC=ASSMB;HOMSEQ=ATT;MAPQ=60;MATEID=50402:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_1_190855001_190880001_71C;SPAN=169;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:21:30:14.6:60.8,0,14.6:21:0:-62.47:62.47\n1\t192830145\t51140:1\tA\tA]1:193074178]\t82\tPASS\tDISC_MAPQ=39;EVDNC=ASDIS;HOMSEQ=TTCACAATAGCAAAGACTTGGAACCA;MAPQ=43;MATEID=51140:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_192815001_192840001_40C;SPAN=244033;SUBN=2;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:27:13:7.5:82.5,7.5,0:16:13:-82.52:82.52\n1\t193074178\t51140:2\tA\tA]1:192830145]\t82\tPASS\tDISC_MAPQ=9;EVDNC=ASDIS;HOMSEQ=TTCACAATAGCAAAGACTTGGAACCA;MAPQ=31;MATEID=51140:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_192815001_192840001_40C;SPAN=244033;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:27:13:7.5:82.5,7.5,0:16:13:-82.52:82.52\n1\t195115153\t51946:1\tA\t]1:195115296]A\t75\tPASS\tEVDNC=ASSMB;INSERTION=ATAATAATAGTTTTAATGATATTTA;MAPQ=60;MATEID=51946:2;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_1_195093501_195118501_7C;SPAN=143;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:26:38:19.1:75.2,0,19.1:26:0:-76.88:76.88\n1\t195115296\t51946:2\tA\tA[1:195115153[\t75\tPASS\tEVDNC=ASSMB;INSERTION=ATAATAATAGTTTTAATGATATTTA;MAPQ=60;MATEID=51946:1;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_1_195093501_195118501_7C;SPAN=143;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:26:38:19.1:75.2,0,19.1:26:0:-76.88:76.88\n1\t195422180\t52049:1\tG\tG[1:195422969[\t26\tPASS\tEVDNC=ASSMB;HOMSEQ=G;MAPQ=60;MATEID=52049:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_195412001_195437001_33C;SPAN=789;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:25:26:26,0,35.9:10:0:-25.98:26.09\n1\t195422969\t52049:2\tG\t]1:195422180]G\t26\tPASS\tEVDNC=ASSMB;HOMSEQ=G;MAPQ=60;MATEID=52049:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_195412001_195437001_33C;SPAN=789;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:25:26:26,0,35.9:10:0:-25.98:26.09\n1\t195605433\t52131:1\tA\t]1:195640364]A\t25\tPASS\tEVDNC=ASSMB;HOMSEQ=AA;MAPQ=60;MATEID=52131:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_195632501_195657501_26C;SPAN=34931;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:15:12.2:25.4,0,12.2:9:0:-25.74:25.74\n1\t195640364\t52131:2\tA\tA[1:195605433[\t25\tPASS\tEVDNC=ASSMB;HOMSEQ=AA;MAPQ=60;MATEID=52131:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_195632501_195657501_26C;SPAN=34931;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:15:12.2:25.4,0,12.2:9:0:-25.74:25.74\n1\t196626791\t52438:1\tT\tT[1:196627468[\t26\tPASS\tEVDNC=ASSMB;INSERTION=TAAAATAGTAATTTAAAATAGTAATTTAAAATAGTAATTC;MAPQ=60;MATEID=52438:2;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_1_196612501_196637501_5C;SPAN=677;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:24:26.3:26.3,0,32.9:10:0:-26.26:26.32\n1\t196627468\t52438:2\tA\t]1:196626791]A\t26\tPASS\tEVDNC=ASSMB;INSERTION=TAAAATAGTAATTTAAAATAGTAATTTAAAATAGTAATTC;MAPQ=60;MATEID=52438:1;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_1_196612501_196637501_5C;SPAN=677;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:24:26.3:26.3,0,32.9:10:0:-26.26:26.32\n1\t196766665\t52471:1\tT\t]1:196775958]T\t31\tPASS\tDISC_MAPQ=41;EVDNC=DSCRD;IMPRECISE;MAPQ=41;MATEID=52471:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:196766665(-)-1:196775958(+)__1_196759501_196784501D;SPAN=9293;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:30:31.1:31.1,0,44.3:0:12:-31.18:31.31\n1\t196775958\t52471:2\tA\tA[1:196766665[\t31\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=52471:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:196766665(-)-1:196775958(+)__1_196759501_196784501D;SPAN=9293;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:30:31.1:31.1,0,44.3:0:12:-31.18:31.31\n1\t197531390\t52816:1\tT\tT[1:197534142[\t58\tPASS\tEVDNC=ASSMB;HOMSEQ=AACAAATCTTTT;MAPQ=60;MATEID=52816:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_1_197519001_197544001_32C;SPAN=2752;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:25:87:58.1:58.1,0,160.4:25:0:-58.07:60.75\n1\t197534142\t52816:2\tA\t]1:197531390]A\t58\tPASS\tEVDNC=ASSMB;HOMSEQ=AACAAATCTTTT;MAPQ=60;MATEID=52816:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_1_197519001_197544001_32C;SPAN=2752;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:25:87:58.1:58.1,0,160.4:25:0:-58.07:60.75\n1\t197544937\t52839:1\tA\t[10:21717820[A\t49\tPASS\tDISC_MAPQ=55;EVDNC=TSI_L;INSERTION=CCCTTCTCC;MAPQ=60;MATEID=52839:2;MATENM=0;NM=14;NUMPARTS=3;REPSEQ=CC;SCTG=c_1_197543501_197568501_0C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:17:8:4.5:49.5,4.5,0:15:9:-49.51:49.51\n1\t197787659\t52920:1\tT\t[1:197788855[T\t92\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TG;MAPQ=60;MATEID=52920:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_197788501_197813501_146C;SPAN=1196;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:30:13:8.4:92.4,8.4,0:21:13:-92.42:92.42\n1\t197788855\t52920:2\tC\t[1:197787659[C\t92\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TG;MAPQ=60;MATEID=52920:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_197788501_197813501_146C;SPAN=1196;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:30:13:8.4:92.4,8.4,0:21:13:-92.42:92.42\n1\t198394972\t53112:1\tC\t[1:198396527[C\t27\tPASS\tDISC_MAPQ=48;EVDNC=ASDIS;HOMSEQ=TGG;MAPQ=46;MATEID=53112:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_198376501_198401501_35C;SPAN=1555;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:33:27.2:27.2,0,53.6:6:8:-27.04:27.59\n1\t198396527\t53112:2\tT\t[1:198394972[T\t27\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TGG;MAPQ=60;MATEID=53112:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_198376501_198401501_35C;SPAN=1555;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:33:27.2:27.2,0,53.6:6:8:-27.04:27.59\n1\t198411139\t887423:1\tT\tT[20:58411089[\t7\tPASS\tEVDNC=ASSMB;INSERTION=AAGAAAC;MAPQ=60;MATEID=887423:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_58408001_58433001_70C;SPAN=-1;SUBN=1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:68:7.4:7.4,0,162.5:8:0:-7.294:15.98\n1\t199469615\t53457:1\tA\tA[1:199471106[\t80\tPASS\tEVDNC=ASSMB;HOMSEQ=AAAAATATTGGGTCTCA;MAPQ=60;MATEID=53457:2;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_1_199454501_199479501_28C;SPAN=1491;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:31:78:80.6:80.6,0,113.6:31:0:-80.41:80.76\n1\t199471106\t53457:2\tA\t]1:199469615]A\t80\tPASS\tEVDNC=ASSMB;HOMSEQ=AAAAATATTGGGTCTCA;MAPQ=60;MATEID=53457:1;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_1_199454501_199479501_28C;SPAN=1491;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:31:78:80.6:80.6,0,113.6:31:0:-80.41:80.76\n1\t201509820\t54322:1\tT\t]1:201560289]T\t51\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TT;MAPQ=60;MATEID=54322:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_201537001_201562001_61C;SPAN=50469;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:18:28:18.5:51.5,0,18.5:10:14:-52.37:52.37\n1\t201560289\t54322:2\tT\tT[1:201509820[\t51\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TT;MAPQ=60;MATEID=54322:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_201537001_201562001_61C;SPAN=50469;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:18:28:18.5:51.5,0,18.5:10:14:-52.37:52.37\n1\t201763560\t54467:1\tG\tG[1:202017203[\t40\tPASS\tEVDNC=ASSMB;INSERTION=G;MAPQ=60;MATEID=54467:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_202002501_202027501_0C;SPAN=253643;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:20:7.7:40.7,0,7.7:14:0:-41.65:41.65\n1\t201949360\t69640:1\tT\t[2:5997703[T\t31\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;MAPQ=60;MATEID=69640:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_2_5978001_6003001_1C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:18:11.6:31.4,0,11.6:8:5:-31.6:31.6\n1\t202017203\t54467:2\tT\t]1:201763560]T\t40\tPASS\tEVDNC=ASSMB;INSERTION=G;MAPQ=60;MATEID=54467:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_202002501_202027501_0C;SPAN=253643;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:20:7.7:40.7,0,7.7:14:0:-41.65:41.65\n1\t202207989\t69642:1\tA\tA]2:5987300]\t26\tPASS\tDISC_MAPQ=57;EVDNC=DSCRD;IMPRECISE;MAPQ=57;MATEID=69642:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:202207989(+)-2:5987300(+)__2_5978001_6003001D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:13:6.2:26,0,6.2:0:9:-26.69:26.69\n1\t202625106\t723413:1\tG\tG[15:30173126[\t31\tPASS\tDISC_MAPQ=255;EVDNC=TSI_L;HOMSEQ=GTGTGTGG;INSERTION=TGTTGTGTGTGGCCTGTAATAGG;MAPQ=60;MATEID=723413:2;MATENM=0;NM=1;NUMPARTS=3;REPSEQ=GTGTGTGT;SCTG=c_15_30159501_30184501_42C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:20:33:11:31,0,11:10:10:-31.29:31.29\n1\t203095218\t54940:1\tA\tA[1:203096063[\t41\tPASS\tEVDNC=ASSMB;INSERTION=TCCTATCTGTTT;MAPQ=60;MATEID=54940:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_203080501_203105501_70C;SPAN=845;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:15:27:25.4:41.9,0,25.4:15:0:-42.12:42.12\n1\t203096063\t54940:2\tT\t]1:203095218]T\t41\tPASS\tEVDNC=ASSMB;INSERTION=TCCTATCTGTTT;MAPQ=60;MATEID=54940:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_203080501_203105501_70C;SPAN=845;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:15:27:25.4:41.9,0,25.4:15:0:-42.12:42.12\n1\t203715212\t55121:1\tT\tT[1:203717071[\t56\tPASS\tDISC_MAPQ=56;EVDNC=DSCRD;IMPRECISE;MAPQ=56;MATEID=55121:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:203715212(+)-1:203717071(-)__1_203693001_203718001D;SPAN=1859;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:19:24:3.2:56,0,3.2:0:19:-58.57:58.57\n1\t203717071\t55121:2\tG\t]1:203715212]G\t56\tPASS\tDISC_MAPQ=58;EVDNC=DSCRD;IMPRECISE;MAPQ=58;MATEID=55121:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:203715212(+)-1:203717071(-)__1_203693001_203718001D;SPAN=1859;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:19:24:3.2:56,0,3.2:0:19:-58.57:58.57\n1\t205966752\t55983:1\tC\tC[1:205967055[\t53\tPASS\tEVDNC=ASSMB;HOMSEQ=AAGATAAAGGAGGC;MAPQ=60;MATEID=55983:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_1_205947001_205972001_100C;SPAN=303;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:19:33:27.2:53.6,0,27.2:19:0:-53.81:53.81\n1\t205967055\t55983:2\tA\t]1:205966752]A\t53\tPASS\tEVDNC=ASSMB;HOMSEQ=AAGATAAAGGAGGC;MAPQ=60;MATEID=55983:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_1_205947001_205972001_100C;SPAN=303;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:19:33:27.2:53.6,0,27.2:19:0:-53.81:53.81\n1\t206923997\t56211:1\tG\t]1:206924644]G\t60\tPASS\tDISC_MAPQ=48;EVDNC=DSCRD;IMPRECISE;MAPQ=48;MATEID=56211:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:206923997(-)-1:206924644(+)__1_206902501_206927501D;SPAN=647;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:22:43:47.3:60.5,0,47.3:0:22:-60.61:60.61\n1\t206924644\t56211:2\tT\tT[1:206923997[\t60\tPASS\tDISC_MAPQ=53;EVDNC=DSCRD;IMPRECISE;MAPQ=53;MATEID=56211:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:206923997(-)-1:206924644(+)__1_206902501_206927501D;SPAN=647;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:22:43:47.3:60.5,0,47.3:0:22:-60.61:60.61\n1\t207119002\t56272:1\tA\t[1:207119851[A\t48\tPASS\tDISC_MAPQ=60;EVDNC=TSI_L;INSERTION=AACAC;MAPQ=60;MATEID=56272:2;MATENM=1;NM=1;NUMPARTS=3;REPSEQ=ACAC;SCTG=c_1_207098501_207123501_11C;SPAN=849;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:18:39:48.5:48.5,0,48.5:15:6:-48.46:48.46\n1\t207119017\t56274:1\tG\tG[1:207119851[\t62\tPASS\tDISC_MAPQ=255;EVDNC=TSI_G;INSERTION=GAATTCATTCCAGTTTACAATGGTGGGCTTTACTCGCTCATCTTTGCAGGTTCCACGTTTGTCCTTGAAGCACTCAGTTCATGTCTATCTAACAC;MAPQ=60;MATEID=56274:2;MATENM=1;NM=1;NUMPARTS=3;SCTG=c_1_207098501_207123501_11C;SPAN=834;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:22:38:32.3:62,0,32.3:22:0:-62.39:62.39\n1\t207119851\t56272:2\tG\t[1:207119002[G\t48\tPASS\tDISC_MAPQ=60;EVDNC=TSI_L;INSERTION=AACAC;MAPQ=60;MATEID=56272:1;MATENM=1;NM=1;NUMPARTS=3;REPSEQ=ACAC;SCTG=c_1_207098501_207123501_11C;SPAN=849;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:18:39:48.5:48.5,0,48.5:15:6:-48.46:48.46\n1\t207119851\t56274:2\tG\t]1:207119017]G\t62\tPASS\tDISC_MAPQ=255;EVDNC=TSI_G;INSERTION=GAATTCATTCCAGTTTACAATGGTGGGCTTTACTCGCTCATCTTTGCAGGTTCCACGTTTGTCCTTGAAGCACTCAGTTCATGTCTATCTAACAC;MAPQ=60;MATEID=56274:1;MATENM=1;NM=1;NUMPARTS=3;SCTG=c_1_207098501_207123501_11C;SPAN=834;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:22:38:32.3:62,0,32.3:22:0:-62.39:62.39\n1\t207291869\t56340:1\tC\tC[1:207293505[\t20\tPASS\tDISC_MAPQ=53;EVDNC=DSCRD;IMPRECISE;MAPQ=53;MATEID=56340:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:207291869(+)-1:207293505(-)__1_207270001_207295001D;SPAN=1636;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:32:20.9:20.9,0,57.2:0:9:-20.71:21.77\n1\t207293505\t56340:2\tA\t]1:207291869]A\t20\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=56340:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:207291869(+)-1:207293505(-)__1_207270001_207295001D;SPAN=1636;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:32:20.9:20.9,0,57.2:0:9:-20.71:21.77\n1\t207368688\t56373:1\tC\tC[1:207372219[\t54\tPASS\tDISC_MAPQ=56;EVDNC=DSCRD;IMPRECISE;MAPQ=56;MATEID=56373:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:207368688(+)-1:207372219(-)__1_207368001_207393001D;SPAN=3531;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:19:30:21.2:54.2,0,21.2:0:19:-55.07:55.07\n1\t207372219\t56373:2\tC\t]1:207368688]C\t54\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=56373:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:207368688(+)-1:207372219(-)__1_207368001_207393001D;SPAN=3531;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:19:30:21.2:54.2,0,21.2:0:19:-55.07:55.07\n1\t207739629\t35280:2\tC\tC]1:143864342]\t36\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;INSERTION=CTCC;MAPQ=60;MATEID=35280:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_143864001_143889001_6C;SPAN=63875287;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:12:9:3.3:36.3,3.3,0:9:6:-36.31:36.31\n1\t209405199\t56773:1\tC\tC[1:209405400[\t12\tPASS\tEVDNC=ASSMB;HOMSEQ=TAC;MAPQ=60;MATEID=56773:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_209401501_209426501_12C;SPAN=201;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:5:16:12.2:12.2,0,25.4:5:0:-12.01:12.37\n1\t209405400\t56773:2\tT\t]1:209405199]T\t12\tPASS\tEVDNC=ASSMB;HOMSEQ=TAC;MAPQ=60;MATEID=56773:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_209401501_209426501_12C;SPAN=201;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:5:16:12.2:12.2,0,25.4:5:0:-12.01:12.37\n1\t209904710\t56838:1\tA\tA[1:209912633[\t36\tPASS\tEVDNC=ASSMB;INSERTION=GAATTA;MAPQ=60;MATEID=56838:2;MATENM=2;NM=4;NUMPARTS=2;SCTG=c_1_209891501_209916501_14C;SPAN=7923;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:12:5:3.3:36.3,3.3,0:12:0:-36.31:36.31\n1\t209912633\t56838:2\tG\t]1:209904710]G\t36\tPASS\tEVDNC=ASSMB;INSERTION=GAATTA;MAPQ=60;MATEID=56838:1;MATENM=4;NM=2;NUMPARTS=2;SCTG=c_1_209891501_209916501_14C;SPAN=7923;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:12:5:3.3:36.3,3.3,0:12:0:-36.31:36.31\n1\t213160429\t57479:1\tT\t]1:213170967]T\t45\tPASS\tDISC_MAPQ=57;EVDNC=ASDIS;HOMSEQ=TGCA;MAPQ=60;MATEID=57479:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_213150001_213175001_21C;SPAN=10538;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:16:26:19.1:45.5,0,19.1:12:12:-46.05:46.05\n1\t213170967\t57479:2\tA\tA[1:213160429[\t45\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TGCA;MAPQ=60;MATEID=57479:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_213150001_213175001_21C;SPAN=10538;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:16:26:19.1:45.5,0,19.1:12:12:-46.05:46.05\n1\t213512566\t57547:1\tT\t[1:213625887[T\t69\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=CA;MAPQ=60;MATEID=57547:2;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_1_213615501_213640501_20C;SPAN=113321;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:23:11:6.3:69.3,6.3,0:17:9:-69.32:69.32\n1\t213512572\t57548:1\tT\tT]1:213626164]\t72\tPASS\tDISC_MAPQ=54;EVDNC=ASDIS;MAPQ=60;MATEID=57548:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_1_213615501_213640501_10C;SPAN=113592;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:24:11:6.6:72.6,6.6,0:17:9:-72.62:72.62\n1\t213625887\t57547:2\tC\t[1:213512566[C\t69\tPASS\tDISC_MAPQ=13;EVDNC=ASDIS;HOMSEQ=CA;MAPQ=55;MATEID=57547:1;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_1_213615501_213640501_20C;SPAN=113321;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:23:11:6.3:69.3,6.3,0:17:9:-69.32:69.32\n1\t213626164\t57548:2\tA\tA]1:213512572]\t72\tPASS\tDISC_MAPQ=16;EVDNC=ASDIS;MAPQ=42;MATEID=57548:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_1_213615501_213640501_10C;SPAN=113592;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:24:11:6.6:72.6,6.6,0:17:9:-72.62:72.62\n1\t214483362\t57747:1\tT\tT]5:115842122]\t28\tPASS\tDISC_MAPQ=24;EVDNC=DSCRD;IMPRECISE;MAPQ=24;MATEID=57747:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:214483362(+)-5:115842122(+)__1_214473001_214498001D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:16:8.9:28.7,0,8.9:0:10:-28.89:28.89\n1\t214639551\t57774:1\tC\t[20:57108067[C\t62\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;INSERTION=GTAG;MAPQ=60;MATEID=57774:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_214620001_214645001_13C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:20:21:5.7:62.7,5.7,0:14:9:-62.72:62.72\n1\t215441801\t58040:1\tA\t]1:215442558]A\t69\tPASS\tEVDNC=ASSMB;HOMSEQ=AAT;MAPQ=60;MATEID=58040:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_215428501_215453501_11C;SPAN=757;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:26:59:69.2:69.2,0,79.1:26:0:-69.24:69.28\n1\t215442558\t58040:2\tT\tT[1:215441801[\t69\tPASS\tEVDNC=ASSMB;HOMSEQ=AAT;MAPQ=60;MATEID=58040:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_215428501_215453501_11C;SPAN=757;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:26:59:69.2:69.2,0,79.1:26:0:-69.24:69.28\n1\t217284629\t58620:1\tC\tC[1:217285059[\t64\tPASS\tEVDNC=ASSMB;HOMSEQ=TTC;MAPQ=60;MATEID=58620:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_1_217266001_217291001_80C;SPAN=430;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:22:28:5.3:64.7,0,5.3:22:0:-67.65:67.65\n1\t217285059\t58620:2\tT\t]1:217284629]T\t64\tPASS\tEVDNC=ASSMB;HOMSEQ=TTC;MAPQ=60;MATEID=58620:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_1_217266001_217291001_80C;SPAN=430;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:22:28:5.3:64.7,0,5.3:22:0:-67.65:67.65\n1\t217677003\t58748:1\tA\t]1:217682529]A\t37\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;INSERTION=CTTTATTATTTTAAATTATTAAAATATTATTATTTTAATAATTTAATATTATTAATAATAATTAATTAATATTATTAATTTAATATTATTAAAATAATATTAAAATATTATTAAAATATTATTTAAATTATTA;MAPQ=60;MATEID=58748:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_217658001_217683001_8C;SPAN=5526;SUBN=4;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:16:56:37.1:37.1,0,103.1:15:2:-37.08:38.84\n1\t217682529\t58748:2\tT\tT[1:217677003[\t37\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;INSERTION=CTTTATTATTTTAAATTATTAAAATATTATTATTTTAATAATTTAATATTATTAATAATAATTAATTAATATTATTAATTTAATATTATTAAAATAATATTAAAATATTATTAAAATATTATTTAAATTATTA;MAPQ=60;MATEID=58748:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_217658001_217683001_8C;SPAN=5526;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:16:56:37.1:37.1,0,103.1:15:2:-37.08:38.84\n1\t217744180\t58785:1\tC\tC[1:217744483[\t59\tPASS\tEVDNC=ASSMB;HOMSEQ=AAAGAATTTTC;MAPQ=60;MATEID=58785:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_217731501_217756501_27C;SPAN=303;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:21:35:26.6:59.6,0,26.6:21:0:-60.07:60.07\n1\t217744483\t58785:2\tA\t]1:217744180]A\t59\tPASS\tEVDNC=ASSMB;HOMSEQ=AAAGAATTTTC;MAPQ=60;MATEID=58785:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_217731501_217756501_27C;SPAN=303;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:21:35:26.6:59.6,0,26.6:21:0:-60.07:60.07\n1\t218009279\t58916:1\tA\tA[1:218015252[\t99\tPASS\tDISC_MAPQ=58;EVDNC=DSCRD;IMPRECISE;MAPQ=58;MATEID=58916:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:218009279(+)-1:218015252(-)__1_218001001_218026001D;SPAN=5973;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:34:11:9.3:102.3,9.3,0:0:34:-102.3:102.3\n1\t218015252\t58916:2\tC\t]1:218009279]C\t99\tPASS\tDISC_MAPQ=59;EVDNC=DSCRD;IMPRECISE;MAPQ=59;MATEID=58916:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:218009279(+)-1:218015252(-)__1_218001001_218026001D;SPAN=5973;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:34:11:9.3:102.3,9.3,0:0:34:-102.3:102.3\n1\t218072296\t58956:1\tA\tA[1:218073148[\t56\tPASS\tEVDNC=ASSMB;HOMSEQ=AAAAAAAGAA;MAPQ=60;MATEID=58956:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_1_218050001_218075001_13C;SPAN=852;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:20:34:26.9:56.6,0,26.9:20:0:-56.93:56.93\n1\t218073148\t58956:2\tA\t]1:218072296]A\t56\tPASS\tEVDNC=ASSMB;HOMSEQ=AAAAAAAGAA;MAPQ=60;MATEID=58956:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_1_218050001_218075001_13C;SPAN=852;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:20:34:26.9:56.6,0,26.9:20:0:-56.93:56.93\n1\t223081189\t60131:1\tG\tG]Un_JTFH01001976v1_decoy:2126]\t52\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=60131:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_223072501_223097501_5C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:18:10:4.8:52.8,4.8,0:18:0:-52.81:52.81\n1\t223557417\t60201:1\tC\tC[1:223608936[\t23\tPASS\tDISC_MAPQ=16;EVDNC=DSCRD;IMPRECISE;MAPQ=16;MATEID=60201:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:223557417(+)-1:223608936(-)__1_223587001_223612001D;SPAN=51519;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:8:4:2.1:23.1,2.1,0:0:8:-23.11:23.11\n1\t223608936\t60201:2\tT\t]1:223557417]T\t23\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=60201:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:223557417(+)-1:223608936(-)__1_223587001_223612001D;SPAN=51519;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:8:4:2.1:23.1,2.1,0:0:8:-23.11:23.11\n1\t224945988\t60758:1\tC\tC[1:225060988[\t46\tPASS\tDISC_MAPQ=39;EVDNC=DSCRD;IMPRECISE;MAPQ=39;MATEID=60758:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:224945988(+)-1:225060988(-)__1_225057001_225082001D;SPAN=115000;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:16:3:4.2:46.2,4.2,0:0:16:-46.21:46.21\n1\t225060988\t60758:2\tC\t]1:224945988]C\t46\tPASS\tDISC_MAPQ=58;EVDNC=DSCRD;IMPRECISE;MAPQ=58;MATEID=60758:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:224945988(+)-1:225060988(-)__1_225057001_225082001D;SPAN=115000;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:16:3:4.2:46.2,4.2,0:0:16:-46.21:46.21\n1\t225835379\t400824:1\tA\t]7:66112826]A\t23\tPASS\tDISC_MAPQ=37;EVDNC=DSCRD;IMPRECISE;MAPQ=37;MATEID=400824:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:225835379(-)-7:66112826(+)__7_66101001_66126001D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:36:23:23,0,65.9:0:10:-22.89:24.13\n1\t227836405\t61932:1\tC\tC[1:227836705[\t30\tPASS\tEVDNC=ASSMB;HOMSEQ=AATAAAAGCTTCC;MAPQ=60;MATEID=61932:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_227825501_227850501_75C;SPAN=300;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:22:23.6:30.2,0,23.6:11:0:-30.15:30.15\n1\t227836705\t61932:2\tA\t]1:227836405]A\t30\tPASS\tEVDNC=ASSMB;HOMSEQ=AATAAAAGCTTCC;MAPQ=60;MATEID=61932:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_227825501_227850501_75C;SPAN=300;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:22:23.6:30.2,0,23.6:11:0:-30.15:30.15\n1\t227927495\t62260:1\tC\t]1:228934655]C\t82\tPASS\tEVDNC=ASSMB;HOMSEQ=CAG;MAPQ=60;MATEID=62260:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_228928001_228953001_20C;SPAN=1007160;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:27:15:7.5:82.5,7.5,0:27:0:-82.52:82.52\n1\t228154057\t416704:1\tG\t[7:100470421[G\t79\tPASS\tDISC_MAPQ=255;EVDNC=ASDIS;HOMSEQ=AGC;MAPQ=60;MATEID=416704:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_100450001_100475001_20C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:26:15:7.2:79.2,7.2,0:14:19:-79.22:79.22\n1\t228212126\t62042:1\tC\tC[7:100658692[\t20\tPASS\tEVDNC=ASSMB;INSERTION=TGGAGGGTTTGGGAGCCTGTCCA;MAPQ=60;MATEID=62042:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_1_228193001_228218001_63C;SPAN=-1;SUBN=1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:21:20.6:20.6,0,30.5:8:0:-20.51:20.65\n1\t228934655\t62260:2\tG\tG[1:227927495[\t82\tPASS\tEVDNC=ASSMB;HOMSEQ=CAG;MAPQ=60;MATEID=62260:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_228928001_228953001_20C;SPAN=1007160;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:27:15:7.5:82.5,7.5,0:27:0:-82.52:82.52\n1\t230555216\t62473:1\tG\t]1:230555362]G\t21\tPASS\tEVDNC=ASSMB;HOMSEQ=GCCTGTAATCCCAGC;MAPQ=60;MATEID=62473:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_230545001_230570001_6C;SPAN=146;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:29:21.5:21.5,0,51.2:9:0:-21.56:22.23\n1\t230555362\t62473:2\tC\tC[1:230555216[\t21\tPASS\tEVDNC=ASSMB;HOMSEQ=GCCTGTAATCCCAGC;MAPQ=60;MATEID=62473:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_230545001_230570001_6C;SPAN=146;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:29:21.5:21.5,0,51.2:9:0:-21.56:22.23\n1\t232116541\t62784:1\tA\tA]7:98344850]\t46\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=GATTCTCCTGCCTCA;MAPQ=60;MATEID=62784:2;MATENM=3;NM=3;NUMPARTS=2;SCTG=c_1_232113001_232138001_17C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:16:10:4.2:46.2,4.2,0:14:2:-46.21:46.21\n1\t233826553\t63177:1\tT\tT[1:233827866[\t46\tPASS\tDISC_MAPQ=22;EVDNC=DSCRD;IMPRECISE;MAPQ=22;MATEID=63177:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:233826553(+)-1:233827866(-)__1_233828001_233853001D;SPAN=1313;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:16:0:4.2:46.2,4.2,0:0:16:-46.21:46.21\n1\t233827866\t63177:2\tA\t]1:233826553]A\t46\tPASS\tDISC_MAPQ=49;EVDNC=DSCRD;IMPRECISE;MAPQ=49;MATEID=63177:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:233826553(+)-1:233827866(-)__1_233828001_233853001D;SPAN=1313;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:16:0:4.2:46.2,4.2,0:0:16:-46.21:46.21\n1\t234776441\t63373:2\tA\t[1:16725253[A\t99\tPASS\tDISC_MAPQ=58;EVDNC=ASDIS;INSERTION=GCAGAAGCCGGCGGGATGGGGC;MAPQ=60;MATEID=63373:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_234759001_234784001_38C;SPAN=218051188;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:81:22:22.5:247.5,22.5,0:52:53:-247.6:247.6\n1\t235078244\t63458:1\tG\t]1:235078726]G\t18\tPASS\tDISC_MAPQ=49;EVDNC=DSCRD;IMPRECISE;MAPQ=49;MATEID=63458:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:235078244(-)-1:235078726(+)__1_235077501_235102501D;SPAN=482;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:40:18.5:18.5,0,81.2:0:9:-18.47:20.76\n1\t235078726\t63458:2\tG\tG[1:235078244[\t18\tPASS\tDISC_MAPQ=51;EVDNC=DSCRD;IMPRECISE;MAPQ=51;MATEID=63458:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:235078244(-)-1:235078726(+)__1_235077501_235102501D;SPAN=482;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:40:18.5:18.5,0,81.2:0:9:-18.47:20.76\n1\t236958951\t63979:1\tA\tA[1:236961747[\t39\tPASS\tEVDNC=ASSMB;INSERTION=TTCTAGGAAGGAGGTGCACATC;MAPQ=60;MATEID=63979:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_236939501_236964501_2C;SPAN=2796;SUBN=1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:13:12:3.6:39.6,3.6,0:13:0:-39.61:39.61\n1\t236961747\t63979:2\tT\t]1:236958951]T\t39\tPASS\tEVDNC=ASSMB;INSERTION=TTCTAGGAAGGAGGTGCACATC;MAPQ=60;MATEID=63979:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_236939501_236964501_2C;SPAN=2796;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:13:12:3.6:39.6,3.6,0:13:0:-39.61:39.61\n1\t237031073\t64001:1\tC\tC[1:237031884[\t25\tPASS\tEVDNC=ASSMB;HOMSEQ=GC;MAPQ=60;MATEID=64001:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_237013001_237038001_32C;SPAN=811;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:17:15.2:25.1,0,15.2:9:0:-24.99:24.99\n1\t237031884\t64001:2\tG\t]1:237031073]G\t25\tPASS\tEVDNC=ASSMB;HOMSEQ=GC;MAPQ=60;MATEID=64001:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_237013001_237038001_32C;SPAN=811;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:17:15.2:25.1,0,15.2:9:0:-24.99:24.99\n1\t237402791\t64097:1\tA\tA]1:237402976]\t30\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=64097:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:237402791(+)-1:237402976(+)__1_237380501_237405501D;SPAN=185;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:21:20.6:30.5,0,20.6:0:11:-30.47:30.47\n1\t237402976\t64097:2\tA\tA]1:237402791]\t30\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=64097:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:237402791(+)-1:237402976(+)__1_237380501_237405501D;SPAN=185;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:21:20.6:30.5,0,20.6:0:11:-30.47:30.47\n1\t237925038\t64246:1\tT\t]1:237966824]T\t26\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=64246:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:237925038(-)-1:237966824(+)__1_237944001_237969001D;SPAN=41786;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:9:7:2.4:26.4,2.4,0:0:9:-26.41:26.41\n1\t237966824\t64246:2\tT\tT[1:237925038[\t26\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=64246:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:237925038(-)-1:237966824(+)__1_237944001_237969001D;SPAN=41786;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:9:7:2.4:26.4,2.4,0:0:9:-26.41:26.41\n1\t239952717\t64778:1\tT\t[1:239953384[T\t72\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;INSERTION=CCAGCTC;MAPQ=60;MATEID=64778:2;MATENM=14;NM=0;NUMPARTS=2;SCTG=c_1_239953001_239978001_1C;SPAN=667;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:24:6:6.6:72.6,6.6,0:19:18:-72.62:72.62\n1\t239953183\t64780:1\tT\tT]1:239953450]\t21\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=64780:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:239953183(+)-1:239953450(+)__1_239953001_239978001D;SPAN=267;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:19:21.2:21.2,0,24.5:0:8:-21.07:21.11\n1\t239953384\t64778:2\tC\t[1:239952717[C\t72\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;INSERTION=CCAGCTC;MAPQ=60;MATEID=64778:1;MATENM=0;NM=14;NUMPARTS=2;SCTG=c_1_239953001_239978001_1C;SPAN=667;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:24:6:6.6:72.6,6.6,0:19:18:-72.62:72.62\n1\t239953450\t64780:2\tT\tT]1:239953183]\t21\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=64780:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:239953183(+)-1:239953450(+)__1_239953001_239978001D;SPAN=267;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:19:21.2:21.2,0,24.5:0:8:-21.07:21.11\n1\t241920572\t65248:1\tC\t]1:241920722]C\t72\tPASS\tEVDNC=ASSMB;HOMSEQ=CCAAAGTGCTGG;MAPQ=60;MATEID=65248:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_1_241913001_241938001_3C;SPAN=150;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:26:48:46.1:72.5,0,46.1:26:0:-72.58:72.58\n1\t241920722\t65248:2\tG\tG[1:241920572[\t72\tPASS\tEVDNC=ASSMB;HOMSEQ=CCAAAGTGCTGG;MAPQ=60;MATEID=65248:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_1_241913001_241938001_3C;SPAN=150;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:26:48:46.1:72.5,0,46.1:26:0:-72.58:72.58\n1\t242964495\t65568:1\tG\tG[1:242965914[\t49\tPASS\tDISC_MAPQ=18;EVDNC=ASDIS;HOMSEQ=GCCTCCCAAAGTGCTGGGATTACAGG;MAPQ=60;MATEID=65568:2;MATENM=19;NM=2;NUMPARTS=2;SCTG=c_1_242942001_242967001_8C;SPAN=1419;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:17:5:4.5:49.5,4.5,0:15:7:-49.51:49.51\n1\t242965914\t65568:2\tG\t]1:242964495]G\t49\tPASS\tDISC_MAPQ=21;EVDNC=ASDIS;HOMSEQ=GCCTCCCAAAGTGCTGGGATTACAGG;MAPQ=60;MATEID=65568:1;MATENM=2;NM=19;NUMPARTS=2;SCTG=c_1_242942001_242967001_8C;SPAN=1419;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:17:5:4.5:49.5,4.5,0:15:7:-49.51:49.51\n1\t243619556\t65663:1\tA\tA[1:243620461[\t42\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=65663:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:243619556(+)-1:243620461(-)__1_243603501_243628501D;SPAN=905;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:14:3:3.9:42.9,3.9,0:0:14:-42.91:42.91\n1\t243620461\t65663:2\tA\t]1:243619556]A\t42\tPASS\tDISC_MAPQ=53;EVDNC=DSCRD;IMPRECISE;MAPQ=53;MATEID=65663:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:243619556(+)-1:243620461(-)__1_243603501_243628501D;SPAN=905;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:14:3:3.9:42.9,3.9,0:0:14:-42.91:42.91\n1\t247687256\t66816:1\tG\tG[1:247693206[\t36\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=66816:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:247687256(+)-1:247693206(-)__1_247670501_247695501D;SPAN=5950;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:12:12:3.3:36.3,3.3,0:0:12:-36.31:36.31\n1\t247693206\t66816:2\tA\t]1:247687256]A\t36\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=66816:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:247687256(+)-1:247693206(-)__1_247670501_247695501D;SPAN=5950;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:12:12:3.3:36.3,3.3,0:0:12:-36.31:36.31\n1\t247888190\t66912:1\tT\tT[1:247894337[\t89\tPASS\tEVDNC=ASSMB;HOMSEQ=GCATGTATTTATTT;MAPQ=60;MATEID=66912:2;MATENM=3;NM=2;NUMPARTS=2;SCTG=c_1_247891001_247916001_24C;SPAN=6147;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:29:7:8.1:89.1,8.1,0:29:0:-89.12:89.12\n1\t247894337\t66912:2\tG\t]1:247888190]G\t89\tPASS\tEVDNC=ASSMB;HOMSEQ=GCATGTATTTATTT;MAPQ=60;MATEID=66912:1;MATENM=2;NM=3;NUMPARTS=2;SCTG=c_1_247891001_247916001_24C;SPAN=6147;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:29:7:8.1:89.1,8.1,0:29:0:-89.12:89.12\n1\t248752958\t891075:1\tA\tA]21:6070645]\t26\tPASS\tDISC_MAPQ=16;EVDNC=DSCRD;IMPRECISE;MAPQ=16;MATEID=891075:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:248752958(+)-21:6070645(+)__21_6051501_6076501D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:9:2:2.4:26.4,2.4,0:0:9:-26.41:26.41\n2\t1099575\t67773:1\tT\t]2:1099681]T\t56\tPASS\tEVDNC=ASSMB;HOMSEQ=TCTGAAGGTGGGTGTAGTGAGGGCAGT;MAPQ=60;MATEID=67773:2;MATENM=4;NM=1;NUMPARTS=2;SCTG=c_2_1078001_1103001_15C;SPAN=106;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:21:44:53.6:56.9,0,53.6:21:0:-56.96:56.96\n2\t1099681\t67773:2\tT\tT[2:1099575[\t56\tPASS\tEVDNC=ASSMB;HOMSEQ=TCTGAAGGTGGGTGTAGTGAGGGCAGT;MAPQ=60;MATEID=67773:1;MATENM=1;NM=4;NUMPARTS=2;SCTG=c_2_1078001_1103001_15C;SPAN=106;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:21:44:53.6:56.9,0,53.6:21:0:-56.96:56.96\n2\t1111743\t67779:1\tA\t]2:1112592]A\t37\tPASS\tDISC_MAPQ=37;EVDNC=DSCRD;IMPRECISE;MAPQ=37;MATEID=67779:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=2:1111743(-)-2:1112592(+)__2_1102501_1127501D;SPAN=849;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:32:37.4:37.4,0,40.7:0:14:-37.22:37.25\n2\t1112592\t67779:2\tG\tG[2:1111743[\t37\tPASS\tDISC_MAPQ=52;EVDNC=DSCRD;IMPRECISE;MAPQ=52;MATEID=67779:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=2:1111743(-)-2:1112592(+)__2_1102501_1127501D;SPAN=849;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:32:37.4:37.4,0,40.7:0:14:-37.22:37.25\n2\t1751730\t68180:1\tG\t]2:1751781]G\t86\tPASS\tDISC_MAPQ=255;EVDNC=TSI_G;INSERTION=TAGAGCGGGACATGCCCAGGAGTGGAGAGAAGAGAGGTCTTGAGGGTCCTCACCTTGTTAGAGCGGGACATGCCCAGGAGTGGAGAGAAGAGGGGTCTTGAGGGTCCTCACCTTGTGAGAGT;MAPQ=60;MATEID=68180:2;MATENM=1;NM=0;NUMPARTS=4;SCTG=c_2_1739501_1764501_123C;SPAN=51;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:32:69:86.3:86.3,0,86.3:32:0:-86.24:86.24\n2\t1751781\t68180:2\tT\tT[2:1751730[\t86\tPASS\tDISC_MAPQ=255;EVDNC=TSI_G;INSERTION=TAGAGCGGGACATGCCCAGGAGTGGAGAGAAGAGAGGTCTTGAGGGTCCTCACCTTGTTAGAGCGGGACATGCCCAGGAGTGGAGAGAAGAGGGGTCTTGAGGGTCCTCACCTTGTGAGAGT;MAPQ=60;MATEID=68180:1;MATENM=0;NM=1;NUMPARTS=4;SCTG=c_2_1739501_1764501_123C;SPAN=51;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:32:69:86.3:86.3,0,86.3:32:0:-86.24:86.24\n2\t2750138\t68404:1\tG\t]2:2750607]G\t19\tPASS\tDISC_MAPQ=15;EVDNC=DSCRD;IMPRECISE;MAPQ=15;MATEID=68404:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=2:2750138(-)-2:2750607(+)__2_2744001_2769001D;SPAN=469;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:24:19.7:19.7,0,39.5:0:8:-19.66:20.07\n2\t2750607\t68404:2\tT\tT[2:2750138[\t19\tPASS\tDISC_MAPQ=33;EVDNC=DSCRD;IMPRECISE;MAPQ=33;MATEID=68404:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=2:2750138(-)-2:2750607(+)__2_2744001_2769001D;SPAN=469;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:24:19.7:19.7,0,39.5:0:8:-19.66:20.07\n2\t3046153\t996191:1\tT\t]Un_JTFH01000155v1_decoy:2887]T\t69\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=996191:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_998_1_2887_0C;SPAN=-1;SUBN=7;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:23:7:6.3:69.3,6.3,0:23:0:-69.32:69.32\n2\t3046162\t996192:1\tT\tT[Un_JTFH01000155v1_decoy:1[\t59\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=996192:2;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_998_1_2887_4C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:20:6:5.4:59.4,5.4,0:20:0:-59.41:59.41\n2\t3046162\t68513:1\tT\tT[Un_JTFH01000155v1_decoy:1[\t72\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=68513:2;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_2_3038001_3063001_29C;SPAN=-1;SUBN=8;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:24:28:1.2:72.6,1.2,0:24:0:-76:76\n2\t3141039\t68552:1\tG\t]2:3141594]G\t37\tPASS\tDISC_MAPQ=18;EVDNC=ASDIS;HOMSEQ=GTCCACTCCCACAGCCCCTCAATCAATGCTGATAGACATGGAATCAT;MAPQ=60;MATEID=68552:2;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_2_3136001_3161001_53C;SPAN=555;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:31:37.7:37.7,0,37.7:10:4:-37.5:37.51\n2\t3141594\t68552:2\tT\tT[2:3141039[\t37\tPASS\tDISC_MAPQ=58;EVDNC=ASDIS;HOMSEQ=GTCCACTCCCACAGCCCCTCAATCAATGCTGATAGACATGGAATCAT;MAPQ=27;MATEID=68552:1;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_2_3136001_3161001_53C;SPAN=555;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:31:37.7:37.7,0,37.7:10:4:-37.5:37.51\n2\t3448579\t68680:1\tA\t]2:3448762]A\t15\tPASS\tEVDNC=ASSMB;HOMSEQ=AGGGCGTGGAGAGCAGCCGGTTAC;MAPQ=60;MATEID=68680:2;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_2_3430001_3455001_33C;SPAN=183;SUBN=3;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:38:15.8:15.8,0,78.5:8:0:-15.73:18.19\n2\t3448762\t68680:2\tC\tC[2:3448579[\t15\tPASS\tEVDNC=ASSMB;HOMSEQ=AGGGCGTGGAGAGCAGCCGGTTAC;MAPQ=60;MATEID=68680:1;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_2_3430001_3455001_33C;SPAN=183;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:38:15.8:15.8,0,78.5:8:0:-15.73:18.19\n2\t3592332\t760178:1\tG\t[16:31103571[G\t25\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=CTCTCC;MAPQ=60;MATEID=760178:2;MATENM=4;NM=0;NUMPARTS=2;SCTG=c_16_31090501_31115501_14C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:17:15.2:25.1,0,15.2:8:2:-24.99:24.99\n2\t4274462\t933497:1\tC\t[X:64512169[C\t36\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=CA;MAPQ=60;MATEID=933497:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_23_64508501_64533501_2C;SPAN=-1;SUBN=2;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:12:5:3.3:36.3,3.3,0:7:5:-36.31:36.31\n2\t4733720\t69159:1\tA\tA[2:4739767[\t82\tPASS\tEVDNC=ASSMB;HOMSEQ=AAAAAAAAAAGATACTGCA;MAPQ=60;MATEID=69159:2;MATENM=5;NM=0;NUMPARTS=2;SCTG=c_2_4728501_4753501_22C;SPAN=6047;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:27:21:7.5:82.5,7.5,0:27:0:-82.52:82.52\n2\t4739767\t69159:2\tA\t]2:4733720]A\t82\tPASS\tEVDNC=ASSMB;HOMSEQ=AAAAAAAAAAGATACTGCA;MAPQ=60;MATEID=69159:1;MATENM=0;NM=5;NUMPARTS=2;SCTG=c_2_4728501_4753501_22C;SPAN=6047;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:27:21:7.5:82.5,7.5,0:27:0:-82.52:82.52\n2\t5022592\t69326:1\tA\t]2:5023212]A\t83\tPASS\tDISC_MAPQ=15;EVDNC=DSCRD;IMPRECISE;MAPQ=15;MATEID=69326:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=2:5022592(-)-2:5023212(+)__2_5022501_5047501D;SPAN=620;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:30:56:56.9:83.3,0,56.9:0:30:-83.54:83.54\n2\t5023212\t69326:2\tA\tA[2:5022592[\t83\tPASS\tDISC_MAPQ=50;EVDNC=DSCRD;IMPRECISE;MAPQ=50;MATEID=69326:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=2:5022592(-)-2:5023212(+)__2_5022501_5047501D;SPAN=620;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:30:56:56.9:83.3,0,56.9:0:30:-83.54:83.54\n2\t5347649\t69456:1\tT\tT[2:5347903[\t49\tPASS\tEVDNC=ASSMB;HOMSEQ=TCTTCTGAATTTCT;MAPQ=60;MATEID=69456:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_5341001_5366001_85C;SPAN=254;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:17:24:9.8:49.4,0,9.8:17:0:-50.74:50.74\n2\t5347903\t69456:2\tT\t]2:5347649]T\t49\tPASS\tEVDNC=ASSMB;HOMSEQ=TCTTCTGAATTTCT;MAPQ=60;MATEID=69456:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_5341001_5366001_85C;SPAN=254;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:17:24:9.8:49.4,0,9.8:17:0:-50.74:50.74\n2\t5987300\t69642:2\tG\tG]1:202207989]\t26\tPASS\tDISC_MAPQ=59;EVDNC=DSCRD;IMPRECISE;MAPQ=59;MATEID=69642:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:202207989(+)-2:5987300(+)__2_5978001_6003001D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:13:6.2:26,0,6.2:0:9:-26.69:26.69\n2\t5997703\t69640:2\tT\t[1:201949360[T\t31\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;MAPQ=60;MATEID=69640:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_2_5978001_6003001_1C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:18:11.6:31.4,0,11.6:8:5:-31.6:31.6\n2\t6260376\t69707:1\tC\tC[2:6262062[\t50\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=69707:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_2_6247501_6272501_84C;SPAN=1686;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:18:33:30.5:50.3,0,30.5:18:0:-50.33:50.33\n2\t6262062\t69707:2\tA\t]2:6260376]A\t50\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=69707:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_2_6247501_6272501_84C;SPAN=1686;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:18:33:30.5:50.3,0,30.5:18:0:-50.33:50.33\n2\t6495945\t69807:1\tG\t]2:6496024]G\t36\tPASS\tEVDNC=ASSMB;HOMSEQ=GCTTC;MAPQ=32;MATEID=69807:2;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_2_6492501_6517501_61C;SPAN=79;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:15:47:36.5:36.5,0,79.4:15:0:-36.3:37.28\n2\t6496024\t69807:2\tC\tC[2:6495945[\t36\tPASS\tEVDNC=ASSMB;HOMSEQ=GCTTC;MAPQ=60;MATEID=69807:1;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_2_6492501_6517501_61C;SPAN=79;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:15:47:36.5:36.5,0,79.4:15:0:-36.3:37.28\n2\t6658148\t69895:1\tC\tC[18:12202407[\t28\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=69895:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=2:6658148(+)-18:12202407(-)__2_6639501_6664501D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:15:8.9:28.7,0,8.9:0:10:-29.37:29.37\n2\t9998890\t70988:1\tA\t[13:85488927[A\t52\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TATATAT;MAPQ=60;MATEID=70988:2;MATENM=48;NM=0;NUMPARTS=2;SCTG=c_2_9996001_10021001_50C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:18:6:4.8:52.8,4.8,0:11:8:-52.81:52.81\n2\t10011510\t70991:1\tC\t]2:10013339]C\t25\tPASS\tDISC_MAPQ=43;EVDNC=DSCRD;IMPRECISE;MAPQ=43;MATEID=70991:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=2:10011510(-)-2:10013339(+)__2_9996001_10021001D;SPAN=1829;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:39:25.4:25.4,0,71.6:0:11:-25.35:26.63\n2\t10013339\t70991:2\tT\tT[2:10011510[\t25\tPASS\tDISC_MAPQ=51;EVDNC=DSCRD;IMPRECISE;MAPQ=51;MATEID=70991:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=2:10011510(-)-2:10013339(+)__2_9996001_10021001D;SPAN=1829;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:39:25.4:25.4,0,71.6:0:11:-25.35:26.63\n2\t10291379\t71120:1\tA\tA[2:10291576[\t65\tPASS\tEVDNC=ASSMB;INSERTION=TACGTATATACACATATATACGTATACATATACACGTATATATACATATATGTATACGTATACGTATACACGTATATATACATATG;MAPQ=60;MATEID=71120:2;MATENM=5;NM=0;NUMPARTS=2;SCTG=c_2_10290001_10315001_45C;SPAN=197;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:22:27:2.3:65,0,2.3:22:0:-68.44:68.44\n2\t10291576\t71120:2\tT\t]2:10291379]T\t65\tPASS\tEVDNC=ASSMB;INSERTION=TACGTATATACACATATATACGTATACATATACACGTATATATACATATATGTATACGTATACGTATACACGTATATATACATATG;MAPQ=60;MATEID=71120:1;MATENM=0;NM=5;NUMPARTS=2;SCTG=c_2_10290001_10315001_45C;SPAN=197;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:22:27:2.3:65,0,2.3:22:0:-68.44:68.44\n2\t10629240\t71249:1\tC\t]2:10629728]C\t13\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=71249:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=2:10629240(-)-2:10629728(+)__2_10608501_10633501D;SPAN=488;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:47:13.4:13.4,0,102.5:0:8:-13.2:17.36\n2\t10629241\t71250:1\tA\t]2:10629638]A\t35\tPASS\tEVDNC=ASSMB;INSERTION=TGCAAAGAAATGTAACAGAATTATTT;MAPQ=60;MATEID=71250:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_10608501_10633501_34C;SPAN=397;SUBN=4;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:15:49:35.9:35.9,0,85.4:15:0:-35.74:36.95\n2\t10629638\t71250:2\tA\tA[2:10629241[\t35\tPASS\tEVDNC=ASSMB;INSERTION=TGCAAAGAAATGTAACAGAATTATTT;MAPQ=60;MATEID=71250:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_10608501_10633501_34C;SPAN=397;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:15:49:35.9:35.9,0,85.4:15:0:-35.74:36.95\n2\t10629728\t71249:2\tT\tT[2:10629240[\t13\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=71249:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=2:10629240(-)-2:10629728(+)__2_10608501_10633501D;SPAN=488;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:47:13.4:13.4,0,102.5:0:8:-13.2:17.36\n2\t11380447\t71691:1\tA\tA[2:11380717[\t45\tPASS\tEVDNC=ASSMB;INSERTION=C;MAPQ=60;MATEID=71691:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_11368001_11393001_71C;SPAN=270;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:17:39:45.2:45.2,0,51.8:17:0:-45.15:45.19\n2\t11380717\t71691:2\tG\t]2:11380447]G\t45\tPASS\tEVDNC=ASSMB;INSERTION=C;MAPQ=60;MATEID=71691:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_11368001_11393001_71C;SPAN=270;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:17:39:45.2:45.2,0,51.8:17:0:-45.15:45.19\n2\t11853890\t71889:1\tG\t]2:11854829]G\t13\tPASS\tDISC_MAPQ=2;EVDNC=ASDIS;HOMSEQ=GATGATGCAGGGTGAGTGCTTAGACCCACTGCTTCCAGAATGCCTGTGCATTCACCCCGATGATGCAGGGTGAG;MAPQ=35;MATEID=71889:2;MATENM=9;NM=1;NUMPARTS=2;SCTG=c_2_11833501_11858501_84C;SPAN=939;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:45:13.7:13.7,0,99.5:8:2:-13.76:17.53\n2\t11854829\t71889:2\tG\tG[2:11853890[\t13\tPASS\tDISC_MAPQ=4;EVDNC=ASDIS;HOMSEQ=GATGATGCAGGGTGAGTGCTTAGACCCACTGCTTCCAGAATGCCTGTGCATTCACCCCGATGATGCAGGGTGAG;MAPQ=18;MATEID=71889:1;MATENM=1;NM=9;NUMPARTS=2;SCTG=c_2_11833501_11858501_84C;SPAN=939;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:45:13.7:13.7,0,99.5:8:2:-13.76:17.53\n2\t14239176\t72679:1\tT\tT[2:14245877[\t17\tPASS\tEVDNC=ASSMB;INSERTION=AACCTCACCT;MAPQ=60;MATEID=72679:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_14234501_14259501_51C;SPAN=6701;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:32:17.6:17.6,0,60.5:8:0:-17.41:18.87\n2\t14245877\t72679:2\tC\t]2:14239176]C\t17\tPASS\tEVDNC=ASSMB;INSERTION=AACCTCACCT;MAPQ=60;MATEID=72679:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_14234501_14259501_51C;SPAN=6701;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:32:17.6:17.6,0,60.5:8:0:-17.41:18.87\n2\t14391167\t72772:1\tC\tC[2:14391495[\t40\tPASS\tEVDNC=ASSMB;INSERTION=AATGTCA;MAPQ=60;MATEID=72772:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_14381501_14406501_96C;SPAN=328;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:22:13.7:40.1,0,13.7:14:0:-40.63:40.63\n2\t14391495\t72772:2\tT\t]2:14391167]T\t40\tPASS\tEVDNC=ASSMB;INSERTION=AATGTCA;MAPQ=60;MATEID=72772:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_14381501_14406501_96C;SPAN=328;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:22:13.7:40.1,0,13.7:14:0:-40.63:40.63\n2\t14564047\t72832:1\tG\tG[2:14569993[\t62\tPASS\tEVDNC=ASSMB;HOMSEQ=AG;MAPQ=60;MATEID=72832:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_14553001_14578001_5C;SPAN=5946;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:22:35:23.3:62.9,0,23.3:22:0:-63.65:63.65\n2\t14569993\t72832:2\tA\t]2:14564047]A\t62\tPASS\tEVDNC=ASSMB;HOMSEQ=AG;MAPQ=60;MATEID=72832:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_14553001_14578001_5C;SPAN=5946;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:22:35:23.3:62.9,0,23.3:22:0:-63.65:63.65\n2\t15475786\t73136:1\tA\t]2:15492424]A\t57\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=A;MAPQ=60;MATEID=73136:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_15484001_15509001_176C;SPAN=16638;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:20:29:14.9:57.8,0,14.9:18:9:-59.26:59.26\n2\t15492424\t73136:2\tA\tA[2:15475786[\t57\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=A;MAPQ=60;MATEID=73136:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_15484001_15509001_176C;SPAN=16638;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:20:29:14.9:57.8,0,14.9:18:9:-59.26:59.26\n2\t16110969\t73436:1\tT\tT[2:16111310[\t99\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;INSERTION=CTTCTCCACCCTCCG;MAPQ=60;MATEID=73436:2;MATENM=0;NM=4;NUMPARTS=2;SCTG=c_2_16096501_16121501_39C;SPAN=341;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:42:28:11.7:128.7,11.7,0:36:9:-128.7:128.7\n2\t16111310\t73436:2\tG\t]2:16110969]G\t99\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;INSERTION=CTTCTCCACCCTCCG;MAPQ=60;MATEID=73436:1;MATENM=4;NM=0;NUMPARTS=2;SCTG=c_2_16096501_16121501_39C;SPAN=341;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:42:28:11.7:128.7,11.7,0:36:9:-128.7:128.7\n2\t16131544\t73449:1\tG\tG[2:16133693[\t46\tPASS\tDISC_MAPQ=57;EVDNC=DSCRD;IMPRECISE;MAPQ=57;MATEID=73449:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=2:16131544(+)-2:16133693(-)__2_16121001_16146001D;SPAN=2149;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:16:6:4.2:46.2,4.2,0:0:16:-46.21:46.21\n2\t16133693\t73449:2\tA\t]2:16131544]A\t46\tPASS\tDISC_MAPQ=33;EVDNC=DSCRD;IMPRECISE;MAPQ=33;MATEID=73449:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=2:16131544(+)-2:16133693(-)__2_16121001_16146001D;SPAN=2149;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:16:6:4.2:46.2,4.2,0:0:16:-46.21:46.21\n2\t16224895\t73484:1\tT\tT]2:16225346]\t20\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=73484:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=2:16224895(+)-2:16225346(+)__2_16219001_16244001D;SPAN=451;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:33:20.6:20.6,0,60.2:0:9:-20.43:21.63\n2\t16225346\t73484:2\tT\tT]2:16224895]\t20\tPASS\tDISC_MAPQ=57;EVDNC=DSCRD;IMPRECISE;MAPQ=57;MATEID=73484:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=2:16224895(+)-2:16225346(+)__2_16219001_16244001D;SPAN=451;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:33:20.6:20.6,0,60.2:0:9:-20.43:21.63\n2\t18392977\t74156:1\tT\tT[2:18393259[\t30\tPASS\tEVDNC=ASSMB;HOMSEQ=GTGAAAGATCTTT;MAPQ=60;MATEID=74156:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_18375001_18400001_27C;SPAN=282;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:22:23.6:30.2,0,23.6:11:0:-30.15:30.15\n2\t18393259\t74156:2\tG\t]2:18392977]G\t30\tPASS\tEVDNC=ASSMB;HOMSEQ=GTGAAAGATCTTT;MAPQ=60;MATEID=74156:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_18375001_18400001_27C;SPAN=282;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:22:23.6:30.2,0,23.6:11:0:-30.15:30.15\n2\t19412343\t74443:1\tT\t]2:19424559]T\t18\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=74443:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=2:19412343(-)-2:19424559(+)__2_19404001_19429001D;SPAN=12216;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:39:18.8:18.8,0,78.2:0:9:-18.75:20.87\n2\t19424559\t74443:2\tC\tC[2:19412343[\t18\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=74443:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=2:19412343(-)-2:19424559(+)__2_19404001_19429001D;SPAN=12216;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:39:18.8:18.8,0,78.2:0:9:-18.75:20.87\n2\t19567822\t74511:1\tT\tT[2:19570802[\t46\tPASS\tEVDNC=ASSMB;HOMSEQ=GT;MAPQ=60;MATEID=74511:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_19551001_19576001_28C;SPAN=2980;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:16:24:13.1:46.1,0,13.1:16:0:-46.99:46.99\n2\t19570802\t74511:2\tG\t]2:19567822]G\t46\tPASS\tEVDNC=ASSMB;HOMSEQ=GT;MAPQ=60;MATEID=74511:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_19551001_19576001_28C;SPAN=2980;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:16:24:13.1:46.1,0,13.1:16:0:-46.99:46.99\n2\t20466917\t74769:1\tG\tG[2:20467212[\t49\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AAAATGCCATGTG;MAPQ=60;MATEID=74769:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_20457501_20482501_24C;SPAN=295;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:17:23:6.8:49.7,0,6.8:12:5:-51.34:51.34\n2\t20467212\t74769:2\tA\t]2:20466917]A\t49\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AAAATGCCATGTG;MAPQ=60;MATEID=74769:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_20457501_20482501_24C;SPAN=295;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:17:23:6.8:49.7,0,6.8:12:5:-51.34:51.34\n2\t20809619\t74841:1\tC\t]2:20845442]C\t37\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=74841:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_20825001_20850001_18C;SPAN=35823;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:30:37.7:37.7,0,37.7:14:0:-37.78:37.78\n2\t20845442\t74841:2\tA\tA[2:20809619[\t37\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=74841:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_20825001_20850001_18C;SPAN=35823;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:30:37.7:37.7,0,37.7:14:0:-37.78:37.78\n2\t21964098\t75152:1\tA\t]2:21970342]A\t19\tPASS\tEVDNC=ASSMB;HOMSEQ=AC;MAPQ=60;MATEID=75152:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_21952001_21977001_1C;SPAN=6244;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:50:19.1:19.1,0,104.9:10:0:-18.96:22.48\n2\t21970342\t75152:2\tC\tC[2:21964098[\t19\tPASS\tEVDNC=ASSMB;HOMSEQ=AC;MAPQ=60;MATEID=75152:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_21952001_21977001_1C;SPAN=6244;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:50:19.1:19.1,0,104.9:10:0:-18.96:22.48\n2\t21986910\t75157:1\tC\t]2:21995787]C\t27\tPASS\tEVDNC=ASSMB;INSERTION=AATT;MAPQ=60;MATEID=75157:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_21976501_22001501_19C;SPAN=8877;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:44:27.2:27.2,0,83.3:12:0:-27.24:28.84\n2\t21995787\t75157:2\tG\tG[2:21986910[\t27\tPASS\tEVDNC=ASSMB;INSERTION=AATT;MAPQ=60;MATEID=75157:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_21976501_22001501_19C;SPAN=8877;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:44:27.2:27.2,0,83.3:12:0:-27.24:28.84\n2\t26333431\t989648:1\tA\t[Un_KN707840v1_decoy:1[A\t89\tPASS\tDISC_MAPQ=255;EVDNC=TSI_L;MAPQ=60;MATEID=989648:2;MATENM=0;NM=0;NUMPARTS=3;SCTG=c_691_1_3298_13C;SPAN=-1;SUBN=3;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:29:10:8.1:89.1,8.1,0:29:0:-89.12:89.12\n2\t26714469\t996560:1\tG\t]Un_JTFH01000208v1_decoy:2601]G\t82\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=996560:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1051_1_2601_7C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:27:7:7.5:82.5,7.5,0:27:0:-82.52:82.52\n2\t30640060\t77857:1\tC\t]2:30738106]C\t33\tPASS\tEVDNC=ASSMB;HOMSEQ=C;MAPQ=60;MATEID=77857:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_30723001_30748001_4C;SPAN=98046;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:23:23.3:33.2,0,23.3:12:0:-33.21:33.21\n2\t30738106\t77857:2\tC\tC[2:30640060[\t33\tPASS\tEVDNC=ASSMB;HOMSEQ=C;MAPQ=60;MATEID=77857:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_30723001_30748001_4C;SPAN=98046;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:23:23.3:33.2,0,23.3:12:0:-33.21:33.21\n2\t31119875\t77958:1\tG\tG[2:31120175[\t92\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AAAAATAATGAGCTAG;MAPQ=60;MATEID=77958:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_31115001_31140001_98C;SPAN=300;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:29:30:8.4:92.4,8.4,0:22:10:-92.42:92.42\n2\t31120175\t77958:2\tA\t]2:31119875]A\t92\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AAAAATAATGAGCTAG;MAPQ=60;MATEID=77958:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_31115001_31140001_98C;SPAN=300;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:29:30:8.4:92.4,8.4,0:22:10:-92.42:92.42\n2\t31423208\t769777:1\tA\t[16:70087940[A\t99\tPASS\tDISC_MAPQ=59;EVDNC=ASDIS;MAPQ=60;MATEID=769777:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_16_70070001_70095001_81C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:35:14:9.6:105.6,9.6,0:26:21:-105.6:105.6\n2\t31823482\t78199:2\tT\t]1:58631258]T\t52\tPASS\tDISC_MAPQ=57;EVDNC=DSCRD;IMPRECISE;MAPQ=57;MATEID=78199:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:58631258(+)-2:31823482(-)__2_31801001_31826001D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:18:15:4.8:52.8,4.8,0:0:18:-52.81:52.81\n2\t32866671\t78642:1\tT\tT[2:32870557[\t56\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AAATATTCCAT;MAPQ=60;MATEID=78642:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_32854501_32879501_56C;SPAN=3886;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:19:23:0.2:56.3,0,0.2:11:12:-59.38:59.38\n2\t32870557\t78642:2\tA\t]2:32866671]A\t56\tPASS\tDISC_MAPQ=59;EVDNC=ASDIS;HOMSEQ=AAATATTCCAT;MAPQ=60;MATEID=78642:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_32854501_32879501_56C;SPAN=3886;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:19:23:0.2:56.3,0,0.2:11:12:-59.38:59.38\n2\t32999395\t78690:1\tA\tA[2:33002226[\t72\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=78690:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_33001501_33026501_15C;SPAN=2831;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:24:17:6.6:72.6,6.6,0:24:0:-72.62:72.62\n2\t33002226\t78690:2\tC\t]2:32999395]C\t72\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=78690:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_33001501_33026501_15C;SPAN=2831;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:24:17:6.6:72.6,6.6,0:24:0:-72.62:72.62\n2\t33894159\t926022:1\tT\t[X:11714296[T\t17\tPASS\tDISC_MAPQ=55;EVDNC=ASDIS;HOMSEQ=CA;MAPQ=60;MATEID=926022:2;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_23_11711001_11736001_46C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:7:20:17.6:17.6,0,30.8:3:5:-17.49:17.74\n2\t34298589\t79234:1\tG\tG[2:34300653[\t99\tPASS\tEVDNC=ASSMB;HOMSEQ=GG;MAPQ=60;MATEID=79234:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_34300001_34325001_16C;SPAN=2064;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:35:10:9.6:105.6,9.6,0:35:0:-105.6:105.6\n2\t34300653\t79234:2\tG\t]2:34298589]G\t99\tPASS\tEVDNC=ASSMB;HOMSEQ=GG;MAPQ=60;MATEID=79234:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_34300001_34325001_16C;SPAN=2064;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:35:10:9.6:105.6,9.6,0:35:0:-105.6:105.6\n2\t34418581\t79317:1\tT\tT[2:34418871[\t89\tPASS\tEVDNC=ASSMB;HOMSEQ=AACTCTCTTGGAATTTCT;MAPQ=60;MATEID=79317:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_2_34398001_34423001_92C;SPAN=290;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:29:15:8.1:89.1,8.1,0:29:0:-89.12:89.12\n2\t34418871\t79317:2\tA\t]2:34418581]A\t89\tPASS\tEVDNC=ASSMB;HOMSEQ=AACTCTCTTGGAATTTCT;MAPQ=60;MATEID=79317:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_2_34398001_34423001_92C;SPAN=290;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:29:15:8.1:89.1,8.1,0:29:0:-89.12:89.12\n2\t35865456\t80027:1\tA\tA[2:35865762[\t48\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AGAAATAAAGAGAAA;MAPQ=60;MATEID=80027:2;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_2_35843501_35868501_176C;SPAN=306;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:17:26:15.8:48.8,0,15.8:13:6:-49.68:49.68\n2\t35865762\t80027:2\tA\t]2:35865456]A\t48\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AGAAATAAAGAGAAA;MAPQ=60;MATEID=80027:1;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_2_35843501_35868501_176C;SPAN=306;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:17:26:15.8:48.8,0,15.8:13:6:-49.68:49.68\n2\t36728531\t80380:1\tT\tT[2:36728834[\t47\tPASS\tEVDNC=ASSMB;HOMSEQ=AAAGAAAAAATATT;MAPQ=60;MATEID=80380:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_36725501_36750501_23C;SPAN=303;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:16:20:1.1:47.3,0,1.1:16:0:-49.48:49.48\n2\t36728834\t80380:2\tA\t]2:36728531]A\t47\tPASS\tEVDNC=ASSMB;HOMSEQ=AAAGAAAAAATATT;MAPQ=60;MATEID=80380:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_36725501_36750501_23C;SPAN=303;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:16:20:1.1:47.3,0,1.1:16:0:-49.48:49.48\n2\t37848471\t80767:1\tC\t]2:37848614]C\t8\tPASS\tEVDNC=ASSMB;INSERTION=ATT;MAPQ=60;MATEID=80767:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_37828001_37853001_4C;SPAN=143;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:6:39:8.9:8.9,0,88.1:6:0:-8.844:12.73\n2\t37848614\t80767:2\tT\tT[2:37848471[\t8\tPASS\tEVDNC=ASSMB;INSERTION=ATT;MAPQ=60;MATEID=80767:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_37828001_37853001_4C;SPAN=143;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:6:39:8.9:8.9,0,88.1:6:0:-8.844:12.73\n2\t37874819\t80820:1\tG\t]2:38031160]G\t31\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;INSERTION=T;MAPQ=60;MATEID=80820:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_38024001_38049001_2C;SPAN=156341;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:17:8.6:31.7,0,8.6:8:7:-32.06:32.06\n2\t38031160\t80820:2\tT\tT[2:37874819[\t31\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;INSERTION=T;MAPQ=60;MATEID=80820:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_38024001_38049001_2C;SPAN=156341;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:17:8.6:31.7,0,8.6:8:7:-32.06:32.06\n2\t40326783\t81573:1\tG\t]2:40368222]G\t30\tPASS\tEVDNC=ASSMB;HOMSEQ=G;MAPQ=60;MATEID=81573:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_2_40351501_40376501_18C;SPAN=41439;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:32:30.8:30.8,0,47.3:12:0:-30.62:30.87\n2\t40368222\t81573:2\tG\tG[2:40326783[\t30\tPASS\tEVDNC=ASSMB;HOMSEQ=G;MAPQ=60;MATEID=81573:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_2_40351501_40376501_18C;SPAN=41439;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:32:30.8:30.8,0,47.3:12:0:-30.62:30.87\n2\t40670800\t81728:1\tC\t]2:40734469]C\t29\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=CT;MAPQ=60;MATEID=81728:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_40719001_40744001_102C;SPAN=63669;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:26:29:29,0,35.6:6:10:-29:29.05\n2\t40734469\t81728:2\tT\tT[2:40670800[\t29\tPASS\tDISC_MAPQ=54;EVDNC=ASDIS;HOMSEQ=CT;MAPQ=60;MATEID=81728:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_40719001_40744001_102C;SPAN=63669;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:26:29:29,0,35.6:6:10:-29:29.05\n2\t40869772\t81804:2\tT\tT[1:73903568[\t18\tPASS\tEVDNC=ASSMB;INSERTION=GAT;MAPQ=60;MATEID=81804:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_40866001_40891001_21C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:7:18:18.2:18.2,0,24.8:7:0:-18.05:18.15\n2\t41011229\t81856:1\tA\tA[2:41023154[\t36\tPASS\tEVDNC=ASSMB;HOMSEQ=AGA;MAPQ=60;MATEID=81856:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_41013001_41038001_41C;SPAN=11925;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:12:12:3.3:36.3,3.3,0:12:0:-36.31:36.31\n2\t41023154\t81856:2\tA\t]2:41011229]A\t36\tPASS\tEVDNC=ASSMB;HOMSEQ=AGA;MAPQ=60;MATEID=81856:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_41013001_41038001_41C;SPAN=11925;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:12:12:3.3:36.3,3.3,0:12:0:-36.31:36.31\n2\t41825584\t234074:1\tT\tT[4:65548212[\t49\tPASS\tDISC_MAPQ=50;EVDNC=DSCRD;IMPRECISE;MAPQ=50;MATEID=234074:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=2:41825584(+)-4:65548212(-)__4_65537501_65562501D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:17:7:4.5:49.5,4.5,0:0:17:-49.51:49.51\n2\t42431514\t82399:1\tA\t]2:42651232]A\t35\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AAGT;MAPQ=60;MATEID=82399:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_42630001_42655001_20C;SPAN=219718;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:17:5.3:35,0,5.3:6:8:-35.78:35.78\n2\t42651232\t82399:2\tT\tT[2:42431514[\t35\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AAGT;MAPQ=60;MATEID=82399:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_42630001_42655001_20C;SPAN=219718;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:17:5.3:35,0,5.3:6:8:-35.78:35.78\n2\t43431646\t82614:1\tT\tT[2:43432156[\t6\tPASS\tEVDNC=ASSMB;HOMSEQ=AATTTTTTGTACTTTT;MAPQ=60;MATEID=82614:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_2_43414001_43439001_54C;SPAN=510;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:5:36:6.5:6.5,0,82.4:5:0:-6.386:10.37\n2\t43432156\t82614:2\tA\t]2:43431646]A\t6\tPASS\tEVDNC=ASSMB;HOMSEQ=AATTTTTTGTACTTTT;MAPQ=60;MATEID=82614:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_2_43414001_43439001_54C;SPAN=510;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:5:36:6.5:6.5,0,82.4:5:0:-6.386:10.37\n2\t44240073\t82829:1\tC\tC[2:44241692[\t42\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=82829:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=2:44240073(+)-2:44241692(-)__2_44222501_44247501D;SPAN=1619;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:14:3:3.9:42.9,3.9,0:0:14:-42.91:42.91\n2\t44241692\t82829:2\tA\t]2:44240073]A\t42\tPASS\tDISC_MAPQ=56;EVDNC=DSCRD;IMPRECISE;MAPQ=56;MATEID=82829:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=2:44240073(+)-2:44241692(-)__2_44222501_44247501D;SPAN=1619;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:14:3:3.9:42.9,3.9,0:0:14:-42.91:42.91\n2\t47092142\t948741:1\tG\t[X:154456620[G\t56\tPASS\tDISC_MAPQ=55;EVDNC=ASDIS;HOMSEQ=G;MAPQ=60;MATEID=948741:2;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_23_154448001_154473001_7C;SPAN=-1;SUBN=1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:19:7:5.1:56.1,5.1,0:12:9:-56.11:56.11\n2\t47385991\t83671:1\tC\t]2:47440172]C\t46\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=83671:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_47432001_47457001_26C;SPAN=54181;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:16:14:4.2:46.2,4.2,0:16:0:-46.21:46.21\n2\t47440172\t83671:2\tT\tT[2:47385991[\t46\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=83671:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_47432001_47457001_26C;SPAN=54181;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:16:14:4.2:46.2,4.2,0:16:0:-46.21:46.21\n2\t47582850\t914841:1\tT\t[22:23853676[T\t47\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TA;MAPQ=60;MATEID=914841:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_22_23838501_23863501_79C;SPAN=-1;SUBN=1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:16:20:1.1:47.3,0,1.1:15:2:-49.48:49.48\n2\t48624053\t84132:1\tA\tA[2:48630814[\t58\tPASS\tEVDNC=ASSMB;HOMSEQ=TA;MAPQ=60;MATEID=84132:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_48608001_48633001_62C;SPAN=6761;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:20:26:5.9:58.7,0,5.9:20:0:-61.11:61.11\n2\t48630814\t84132:2\tT\t]2:48624053]T\t58\tPASS\tEVDNC=ASSMB;HOMSEQ=TA;MAPQ=60;MATEID=84132:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_48608001_48633001_62C;SPAN=6761;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:20:26:5.9:58.7,0,5.9:20:0:-61.11:61.11\n2\t49385759\t84300:1\tT\tT[2:49386067[\t89\tPASS\tEVDNC=ASSMB;HOMSEQ=CAATATTTTTACTCTT;MAPQ=60;MATEID=84300:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_2_49367501_49392501_53C;SPAN=308;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:29:24:8.1:89.1,8.1,0:29:0:-89.12:89.12\n2\t49386067\t84300:2\tC\t]2:49385759]C\t89\tPASS\tEVDNC=ASSMB;HOMSEQ=CAATATTTTTACTCTT;MAPQ=60;MATEID=84300:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_2_49367501_49392501_53C;SPAN=308;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:29:24:8.1:89.1,8.1,0:29:0:-89.12:89.12\n2\t49597021\t84369:1\tA\tA[2:49597348[\t19\tPASS\tEVDNC=ASSMB;HOMSEQ=A;MAPQ=60;MATEID=84369:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_49588001_49613001_28C;SPAN=327;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:25:19.4:19.4,0,42.5:8:0:-19.38:19.89\n2\t49597348\t84369:2\tA\t]2:49597021]A\t19\tPASS\tEVDNC=ASSMB;HOMSEQ=A;MAPQ=60;MATEID=84369:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_49588001_49613001_28C;SPAN=327;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:25:19.4:19.4,0,42.5:8:0:-19.38:19.89\n2\t49725367\t84398:1\tT\t]2:49726478]T\t38\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TCA;MAPQ=60;MATEID=84398:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_49710501_49735501_34C;SPAN=1111;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:15:39:38.6:38.6,0,58.4:11:11:-38.55:38.8\n2\t49726478\t84398:2\tA\tA[2:49725367[\t38\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TCA;MAPQ=60;MATEID=84398:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_49710501_49735501_34C;SPAN=1111;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:15:39:38.6:38.6,0,58.4:11:11:-38.55:38.8\n2\t49836216\t84429:1\tG\t]2:49842728]G\t23\tPASS\tEVDNC=ASSMB;HOMSEQ=G;MAPQ=60;MATEID=84429:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_49833001_49858001_8C;SPAN=6512;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:34:23.6:23.6,0,59.9:10:0:-23.45:24.42\n2\t49842728\t84429:2\tG\tG[2:49836216[\t23\tPASS\tEVDNC=ASSMB;HOMSEQ=G;MAPQ=60;MATEID=84429:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_49833001_49858001_8C;SPAN=6512;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:34:23.6:23.6,0,59.9:10:0:-23.45:24.42\n2\t50587435\t84741:1\tT\tT]2:50589480]\t52\tPASS\tDISC_MAPQ=45;EVDNC=DSCRD;IMPRECISE;MAPQ=45;MATEID=84741:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=2:50587435(+)-2:50589480(+)__2_50568001_50593001D;SPAN=2045;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:18:18:4.8:52.8,4.8,0:0:18:-52.81:52.81\n2\t50589480\t84741:2\tC\tC]2:50587435]\t52\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=84741:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=2:50587435(+)-2:50589480(+)__2_50568001_50593001D;SPAN=2045;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:18:18:4.8:52.8,4.8,0:0:18:-52.81:52.81\n2\t54338356\t85639:1\tG\tG[2:54340337[\t99\tPASS\tEVDNC=ASSMB;INSERTION=TAA;MAPQ=60;MATEID=85639:2;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_2_54316501_54341501_38C;SPAN=1981;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:42:21:11.7:128.7,11.7,0:42:0:-128.7:128.7\n2\t54340337\t85639:2\tA\t]2:54338356]A\t99\tPASS\tEVDNC=ASSMB;INSERTION=TAA;MAPQ=60;MATEID=85639:1;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_2_54316501_54341501_38C;SPAN=1981;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:42:21:11.7:128.7,11.7,0:42:0:-128.7:128.7\n2\t54466357\t85680:1\tT\tT[2:54466606[\t49\tPASS\tEVDNC=ASSMB;HOMSEQ=AAGTATGTTTATTCTT;MAPQ=60;MATEID=85680:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_54463501_54488501_20C;SPAN=249;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:20:60:49.1:49.1,0,101.9:20:0:-49.15:50.17\n2\t54466606\t85680:2\tA\t]2:54466357]A\t49\tPASS\tEVDNC=ASSMB;HOMSEQ=AAGTATGTTTATTCTT;MAPQ=60;MATEID=85680:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_54463501_54488501_20C;SPAN=249;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:20:60:49.1:49.1,0,101.9:20:0:-49.15:50.17\n2\t55567377\t86186:1\tT\t]2:55678660]T\t21\tPASS\tEVDNC=ASSMB;HOMSEQ=TTC;MAPQ=60;MATEID=86186:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_55664001_55689001_27C;SPAN=111283;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:28:21.8:21.8,0,48.2:9:0:-21.84:22.4\n2\t55633365\t86159:1\tG\tG[2:55633523[\t28\tPASS\tEVDNC=ASSMB;HOMSEQ=TCCCAGCTACTGGGGAGGCTGAG;MAPQ=60;MATEID=86159:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_2_55615001_55640001_46C;SPAN=158;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:18:14.9:28.1,0,14.9:10:0:-28.08:28.08\n2\t55633523\t86159:2\tT\t]2:55633365]T\t28\tPASS\tEVDNC=ASSMB;HOMSEQ=TCCCAGCTACTGGGGAGGCTGAG;MAPQ=60;MATEID=86159:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_2_55615001_55640001_46C;SPAN=158;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:18:14.9:28.1,0,14.9:10:0:-28.08:28.08\n2\t55678660\t86186:2\tC\tC[2:55567377[\t21\tPASS\tEVDNC=ASSMB;HOMSEQ=TTC;MAPQ=60;MATEID=86186:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_55664001_55689001_27C;SPAN=111283;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:28:21.8:21.8,0,48.2:9:0:-21.84:22.4\n2\t55843973\t86245:1\tA\tA[2:55844263[\t99\tPASS\tDISC_MAPQ=59;EVDNC=ASDIS;HOMSEQ=A;MAPQ=60;MATEID=86245:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_55835501_55860501_48C;SPAN=290;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:34:28:9.3:102.3,9.3,0:26:10:-102.3:102.3\n2\t55844263\t86245:2\tA\t]2:55843973]A\t99\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=A;MAPQ=60;MATEID=86245:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_55835501_55860501_48C;SPAN=290;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:34:28:9.3:102.3,9.3,0:26:10:-102.3:102.3\n2\t57115608\t86554:1\tT\tT[2:57115922[\t35\tPASS\tEVDNC=ASSMB;HOMSEQ=GCTAGTAGCTTTTT;MAPQ=60;MATEID=86554:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_57109501_57134501_28C;SPAN=314;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:17:5.3:35,0,5.3:12:0:-35.78:35.78\n2\t57115922\t86554:2\tG\t]2:57115608]G\t35\tPASS\tEVDNC=ASSMB;HOMSEQ=GCTAGTAGCTTTTT;MAPQ=60;MATEID=86554:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_57109501_57134501_28C;SPAN=314;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:17:5.3:35,0,5.3:12:0:-35.78:35.78\n2\t61473639\t87757:1\tT\t[2:61476025[T\t55\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=CCTCAGCCTCCCCAGTAGCTGGGA;MAPQ=60;MATEID=87757:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_2_61470501_61495501_64C;SPAN=2386;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:19:27:12.2:55.1,0,12.2:14:10:-56.6:56.6\n2\t61476025\t87757:2\tC\t[2:61473639[C\t55\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=CCTCAGCCTCCCCAGTAGCTGGGA;MAPQ=60;MATEID=87757:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_2_61470501_61495501_64C;SPAN=2386;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:19:27:12.2:55.1,0,12.2:14:10:-56.6:56.6\n2\t65580385\t89177:1\tT\tT[2:65580684[\t85\tPASS\tEVDNC=ASSMB;HOMSEQ=CATGTTACTTTT;MAPQ=60;MATEID=89177:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_2_65562001_65587001_72C;SPAN=299;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:28:16:7.8:85.8,7.8,0:28:0:-85.82:85.82\n2\t65580684\t89177:2\tC\t]2:65580385]C\t85\tPASS\tEVDNC=ASSMB;HOMSEQ=CATGTTACTTTT;MAPQ=60;MATEID=89177:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_2_65562001_65587001_72C;SPAN=299;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:28:16:7.8:85.8,7.8,0:28:0:-85.82:85.82\n2\t66278462\t89363:1\tT\tT[2:66280422[\t19\tPASS\tEVDNC=ASSMB;HOMSEQ=TATAT;MAPQ=60;MATEID=89363:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_66272501_66297501_17C;SPAN=1960;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:26:19.1:19.1,0,45.5:8:0:-19.1:19.73\n2\t66280422\t89363:2\tT\t]2:66278462]T\t19\tPASS\tEVDNC=ASSMB;HOMSEQ=TATAT;MAPQ=60;MATEID=89363:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_66272501_66297501_17C;SPAN=1960;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:26:19.1:19.1,0,45.5:8:0:-19.1:19.73\n2\t66762898\t89508:1\tT\t]2:66763041]T\t65\tPASS\tEVDNC=ASSMB;HOMSEQ=TATATGTGTGTATATATA;MAPQ=60;MATEID=89508:2;MATENM=1;NM=8;NUMPARTS=2;SCTG=c_2_66762501_66787501_12C;SPAN=143;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:23:37:26:65.6,0,26:23:0:-66.36:66.36\n2\t66763041\t89508:2\tA\tA[2:66762898[\t65\tPASS\tEVDNC=ASSMB;HOMSEQ=TATATGTGTGTATATATA;MAPQ=60;MATEID=89508:1;MATENM=8;NM=1;NUMPARTS=2;SCTG=c_2_66762501_66787501_12C;SPAN=143;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:23:37:26:65.6,0,26:23:0:-66.36:66.36\n2\t68687723\t297711:1\tT\tT]5:65172244]\t26\tPASS\tDISC_MAPQ=33;EVDNC=DSCRD;IMPRECISE;MAPQ=33;MATEID=297711:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=2:68687723(+)-5:65172244(+)__5_65170001_65195001D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:8:9:2.4:26.4,2.4,0:0:8:-25.7:25.7\n2\t68687747\t90165:2\tT\tT[1:37472656[\t41\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;INSERTION=ATTATTAG;MAPQ=60;MATEID=90165:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_68673501_68698501_14C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:19:4.7:41,0,4.7:9:10:-42.24:42.24\n2\t68687751\t90166:2\tC\t]1:37472775]C\t56\tPASS\tEVDNC=ASSMB;HOMSEQ=CCAG;MAPQ=60;MATEID=90166:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_2_68673501_68698501_111C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:19:18:5.1:56.1,5.1,0:19:0:-56.11:56.11\n2\t70434172\t556451:1\tT\tT]10:77573728]\t10\tPASS\tDISC_MAPQ=60;EVDNC=TSI_L;HOMSEQ=ATAGAATAGAATAGAATAG;INSERTION=C;MAPQ=60;MATEID=556451:2;MATENM=0;NM=0;NUMPARTS=3;REPSEQ=AGATAAGATAAGATAAGATAAGATAAGATAAGATAAGATAAGATAAGATA;SCTG=c_10_77567001_77592001_32C;SPAN=-1;SUBN=1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:19:3.4:10.3,0,3.4:2:9:-10.19:10.19\n2\t71662937\t91046:1\tT\t]2:71663041]T\t40\tPASS\tEVDNC=ASSMB;HOMSEQ=TGTGTGTG;MAPQ=60;MATEID=91046:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_71662501_71687501_16C;SPAN=104;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:17:55:40.7:40.7,0,96.8:17:0:-40.66:41.96\n2\t71663041\t91046:2\tG\tG[2:71662937[\t40\tPASS\tEVDNC=ASSMB;HOMSEQ=TGTGTGTG;MAPQ=60;MATEID=91046:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_71662501_71687501_16C;SPAN=104;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:17:55:40.7:40.7,0,96.8:17:0:-40.66:41.96\n2\t74269063\t91744:1\tA\t]2:74518704]A\t29\tPASS\tEVDNC=ASSMB;INSERTION=TC;MAPQ=60;MATEID=91744:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_74504501_74529501_22C;SPAN=249641;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:23:26.6:29.9,0,26.6:11:0:-29.85:29.85\n2\t74518704\t91744:2\tT\tT[2:74269063[\t29\tPASS\tEVDNC=ASSMB;INSERTION=TC;MAPQ=60;MATEID=91744:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_74504501_74529501_22C;SPAN=249641;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:23:26.6:29.9,0,26.6:11:0:-29.85:29.85\n2\t74561101\t652191:1\tA\t[12:126832129[A\t51\tPASS\tDISC_MAPQ=9;EVDNC=ASDIS;HOMSEQ=CTCCTCCTCCTTCTCCTCCTCCTCCTTCTCCTCCTCCTCCTTCTCCTCCTCCT;MAPQ=37;MATEID=652191:2;MATENM=0;NM=8;NUMPARTS=2;SCTG=c_12_126812001_126837001_50C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:18:27:15.5:51.8,0,15.5:12:4:-52.86:52.86\n2\t76299386\t92375:1\tT\tT[2:76301768[\t66\tPASS\tEVDNC=ASSMB;HOMSEQ=GTTTTCCATGTTTT;MAPQ=60;MATEID=92375:2;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_2_76293001_76318001_29C;SPAN=2382;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:22:16:6:66,6,0:22:0:-66.02:66.02\n2\t76301768\t92375:2\tG\t]2:76299386]G\t66\tPASS\tEVDNC=ASSMB;HOMSEQ=GTTTTCCATGTTTT;MAPQ=60;MATEID=92375:1;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_2_76293001_76318001_29C;SPAN=2382;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:22:16:6:66,6,0:22:0:-66.02:66.02\n2\t76546427\t92510:1\tT\tT[2:76548327[\t99\tPASS\tEVDNC=ASSMB;INSERTION=TTATTCTTTTA;MAPQ=60;MATEID=92510:2;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_2_76538001_76563001_108C;SPAN=1900;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:37:21:10.2:112.2,10.2,0:37:0:-112.2:112.2\n2\t76548327\t92510:2\tA\t]2:76546427]A\t99\tPASS\tEVDNC=ASSMB;INSERTION=TTATTCTTTTA;MAPQ=60;MATEID=92510:1;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_2_76538001_76563001_108C;SPAN=1900;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:37:21:10.2:112.2,10.2,0:37:0:-112.2:112.2\n2\t77890765\t92950:1\tA\tA[2:77891232[\t59\tPASS\tEVDNC=ASSMB;HOMSEQ=A;MAPQ=60;MATEID=92950:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_77885501_77910501_43C;SPAN=467;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:20:25:2.9:59,0,2.9:20:0:-61.85:61.85\n2\t77891232\t92950:2\tA\t]2:77890765]A\t59\tPASS\tEVDNC=ASSMB;HOMSEQ=A;MAPQ=60;MATEID=92950:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_77885501_77910501_43C;SPAN=467;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:20:25:2.9:59,0,2.9:20:0:-61.85:61.85\n2\t78714738\t93188:1\tA\tA[2:78715161[\t28\tPASS\tEVDNC=ASSMB;HOMSEQ=A;MAPQ=60;MATEID=93188:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_78694001_78719001_1C;SPAN=423;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:41:28.1:28.1,0,74.3:12:0:-28.09:29.28\n2\t78715161\t93188:2\tA\t]2:78714738]A\t28\tPASS\tEVDNC=ASSMB;HOMSEQ=A;MAPQ=60;MATEID=93188:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_78694001_78719001_1C;SPAN=423;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:41:28.1:28.1,0,74.3:12:0:-28.09:29.28\n2\t78830532\t93233:1\tT\tT[2:78830858[\t48\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=ATGAGTTTCTT;MAPQ=60;MATEID=93233:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_2_78816501_78841501_72C;SPAN=326;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:17:27:18.8:48.5,0,18.8:11:7:-49.21:49.21\n2\t78830858\t93233:2\tA\t]2:78830532]A\t48\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=ATGAGTTTCTT;MAPQ=60;MATEID=93233:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_2_78816501_78841501_72C;SPAN=326;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:17:27:18.8:48.5,0,18.8:11:7:-49.21:49.21\n2\t82135166\t94181:1\tC\tC[2:82135354[\t49\tPASS\tEVDNC=ASSMB;HOMSEQ=CTATCTATCTATC;MAPQ=60;MATEID=94181:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_2_82124001_82149001_9C;SPAN=188;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:17:25:12.8:49.1,0,12.8:17:0:-50.18:50.18\n2\t82135354\t94181:2\tC\t]2:82135166]C\t49\tPASS\tEVDNC=ASSMB;HOMSEQ=CTATCTATCTATC;MAPQ=60;MATEID=94181:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_2_82124001_82149001_9C;SPAN=188;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:17:25:12.8:49.1,0,12.8:17:0:-50.18:50.18\n2\t83176495\t94386:1\tT\tT[2:83178048[\t35\tPASS\tEVDNC=ASSMB;HOMSEQ=GT;MAPQ=60;MATEID=94386:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_83177501_83202501_120C;SPAN=1553;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:16:2.3:35.3,0,2.3:12:0:-36.39:36.39\n2\t83178048\t94386:2\tG\t]2:83176495]G\t35\tPASS\tEVDNC=ASSMB;HOMSEQ=GT;MAPQ=60;MATEID=94386:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_83177501_83202501_120C;SPAN=1553;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:16:2.3:35.3,0,2.3:12:0:-36.39:36.39\n2\t85291998\t94967:1\tT\tT[2:85292320[\t29\tPASS\tEVDNC=ASSMB;HOMSEQ=GGTCATATGTATTTTT;MAPQ=60;MATEID=94967:2;MATENM=0;NM=5;NUMPARTS=2;SCTG=c_2_85284501_85309501_12C;SPAN=322;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:15:71:29.6:29.6,0,148.4:15:0:-29.56:34.13\n2\t85292320\t94967:2\tG\t]2:85291998]G\t29\tPASS\tEVDNC=ASSMB;HOMSEQ=GGTCATATGTATTTTT;MAPQ=60;MATEID=94967:1;MATENM=5;NM=0;NUMPARTS=2;SCTG=c_2_85284501_85309501_12C;SPAN=322;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:15:71:29.6:29.6,0,148.4:15:0:-29.56:34.13\n2\t85486995\t922294:1\tC\t]22:49029656]C\t26\tPASS\tDISC_MAPQ=15;EVDNC=ASDIS;INSERTION=G;MAPQ=60;MATEID=922294:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_22_49024501_49049501_90C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:9:7:2.4:26.4,2.4,0:7:4:-26.41:26.41\n2\t85510440\t95053:1\tC\tC[2:85510844[\t5\tPASS\tEVDNC=ASSMB;HOMSEQ=GTGATCCGCCCACCTCGGC;MAPQ=60;MATEID=95053:2;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_2_85505001_85530001_92C;SPAN=404;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:5:40:5.3:5.3,0,94.4:5:0:-5.261:10.13\n2\t85510844\t95053:2\tG\t]2:85510440]G\t5\tPASS\tEVDNC=ASSMB;HOMSEQ=GTGATCCGCCCACCTCGGC;MAPQ=60;MATEID=95053:1;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_2_85505001_85530001_92C;SPAN=404;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:5:40:5.3:5.3,0,94.4:5:0:-5.261:10.13\n2\t87411927\t95712:1\tA\t]2:87415975]A\t35\tPASS\tDISC_MAPQ=38;EVDNC=DSCRD;IMPRECISE;MAPQ=38;MATEID=95712:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=2:87411927(-)-2:87415975(+)__2_87391501_87416501D;SPAN=4048;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:15:50:35.6:35.6,0,88.4:0:15:-35.46:36.79\n2\t87415975\t95712:2\tG\tG[2:87411927[\t35\tPASS\tDISC_MAPQ=18;EVDNC=DSCRD;IMPRECISE;MAPQ=18;MATEID=95712:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=2:87411927(-)-2:87415975(+)__2_87391501_87416501D;SPAN=4048;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:15:50:35.6:35.6,0,88.4:0:15:-35.46:36.79\n2\t88301312\t96152:1\tT\tT[2:88301624[\t40\tPASS\tEVDNC=ASSMB;HOMSEQ=GAGACCTACTTTCTT;MAPQ=60;MATEID=96152:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_2_88298001_88323001_127C;SPAN=312;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:22:13.7:40.1,0,13.7:14:0:-40.63:40.63\n2\t88301624\t96152:2\tG\t]2:88301312]G\t40\tPASS\tEVDNC=ASSMB;HOMSEQ=GAGACCTACTTTCTT;MAPQ=60;MATEID=96152:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_2_88298001_88323001_127C;SPAN=312;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:22:13.7:40.1,0,13.7:14:0:-40.63:40.63\n2\t88729728\t96278:1\tG\tG[2:88732766[\t30\tPASS\tEVDNC=ASSMB;HOMSEQ=GAAAATATTAAAACTAAG;MAPQ=60;MATEID=96278:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_88714501_88739501_14C;SPAN=3038;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:15:68:30.5:30.5,0,139.4:15:0:-30.4:34.45\n2\t88732766\t96278:2\tG\t]2:88729728]G\t30\tPASS\tEVDNC=ASSMB;HOMSEQ=GAAAATATTAAAACTAAG;MAPQ=60;MATEID=96278:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_88714501_88739501_14C;SPAN=3038;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:15:68:30.5:30.5,0,139.4:15:0:-30.4:34.45\n2\t90371363\t96983:1\tT\tT[10:15915313[\t92\tPASS\tDISC_MAPQ=1;EVDNC=ASDIS;INSERTION=TTTTTTTTTA;MAPQ=14;MATEID=96983:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_2_90356001_90381001_107C;SPAN=-1;SUBN=6;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:35:81:92.9:92.9,0,109.4:27:14:-92.77:92.86\n2\t91409350\t97080:1\tA\tA]16:34954400]\t99\tPASS\tDISC_MAPQ=30;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=97080:2;MATENM=2;NM=5;NUMPARTS=2;SCTG=c_2_91385001_91410001_138C;SPAN=-1;SUBN=3;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:38:38:10.5:115.5,10.5,0:27:15:-115.5:115.5\n2\t91412660\t97181:1\tC\tC[2:91412842[\t55\tPASS\tDISC_MAPQ=255;EVDNC=TSI_G;HOMSEQ=AATCATC;INSERTION=TCGAATGGAATCATCATTGAGTGTAATCGAATGG;MAPQ=60;MATEID=97181:2;MATENM=3;NM=2;NUMPARTS=3;SCTG=c_2_91409501_91434501_201C;SECONDARY;SPAN=182;SUBN=1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:30:157:55.1:55.1,0,338.9:30:0:-54.9:66.78\n2\t91412842\t97181:2\tA\t]2:91412660]A\t55\tPASS\tDISC_MAPQ=255;EVDNC=TSI_G;HOMSEQ=AATCATC;INSERTION=TCGAATGGAATCATCATTGAGTGTAATCGAATGG;MAPQ=60;MATEID=97181:1;MATENM=2;NM=3;NUMPARTS=3;SCTG=c_2_91409501_91434501_201C;SECONDARY;SPAN=182;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:30:157:55.1:55.1,0,338.9:30:0:-54.9:66.78\n2\t91530893\t97619:1\tT\t]2:91531369]T\t51\tPASS\tDISC_MAPQ=34;EVDNC=ASDIS;HOMSEQ=TTTATGTTATATATAATATAAACATGATGTATATTCTTAT;MAPQ=12;MATEID=97619:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_91507501_91532501_165C;SPAN=476;SUBN=4;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:25:112:51.2:51.2,0,229.4:24:4:-51.04:57.56\n2\t91531369\t97619:2\tT\tT[2:91530893[\t51\tPASS\tDISC_MAPQ=3;EVDNC=ASDIS;HOMSEQ=TTTATGTTATATATAATATAAACATGATGTATATTCTTAT;MAPQ=15;MATEID=97619:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_91507501_91532501_165C;SPAN=476;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:25:112:51.2:51.2,0,229.4:24:4:-51.04:57.56\n2\t92308749\t98845:1\tA\t]2:93108543]A\t19\tPASS\tDISC_MAPQ=19;EVDNC=DSCRD;IMPRECISE;MAPQ=19;MATEID=98845:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=2:92308749(-)-2:93108543(+)__2_93100001_93125001D;SPAN=799794;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:24:19.7:19.7,0,39.5:0:8:-19.66:20.07\n2\t92651208\t98625:1\tA\tA[2:92867362[\t24\tPASS\tDISC_MAPQ=16;EVDNC=DSCRD;IMPRECISE;MAPQ=16;MATEID=98625:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=2:92651208(+)-2:92867362(-)__2_92855001_92880001D;SPAN=216154;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:32:24.2:24.2,0,53.9:0:10:-24.02:24.74\n2\t92743347\t98519:1\tC\tC[2:94054277[\t14\tPASS\tDISC_MAPQ=21;EVDNC=DSCRD;IMPRECISE;MAPQ=21;MATEID=98519:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=2:92743347(+)-2:94054277(-)__2_92732501_92757501D;SPAN=1310930;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:42:14.6:14.6,0,90.5:0:8:-14.6:17.8\n2\t92867362\t98625:2\tT\t]2:92651208]T\t24\tPASS\tDISC_MAPQ=21;EVDNC=DSCRD;IMPRECISE;MAPQ=21;MATEID=98625:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=2:92651208(+)-2:92867362(-)__2_92855001_92880001D;SPAN=216154;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:32:24.2:24.2,0,53.9:0:10:-24.02:24.74\n2\t92875179\t98636:1\tG\tG[2:93532754[\t37\tPASS\tDISC_MAPQ=31;EVDNC=DSCRD;IMPRECISE;MAPQ=31;MATEID=98636:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=2:92875179(+)-2:93532754(-)__2_92855001_92880001D;SPAN=657575;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:19:8:37.7,0,8:0:13:-38.44:38.44\n2\t93108543\t98845:2\tT\tT[2:92308749[\t19\tPASS\tDISC_MAPQ=29;EVDNC=DSCRD;IMPRECISE;MAPQ=29;MATEID=98845:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=2:92308749(-)-2:93108543(+)__2_93100001_93125001D;SPAN=799794;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:24:19.7:19.7,0,39.5:0:8:-19.66:20.07\n2\t93450067\t99624:1\tA\tA[2:94089858[\t22\tPASS\tDISC_MAPQ=15;EVDNC=DSCRD;IMPRECISE;MAPQ=15;MATEID=99624:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=2:93450067(+)-2:94089858(-)__2_94080001_94105001D;SPAN=639791;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:13:9.5:22.7,0,9.5:0:8:-23.02:23.02\n2\t93469219\t99143:1\tT\t]2:93647620]T\t26\tPASS\tDISC_MAPQ=15;EVDNC=DSCRD;IMPRECISE;MAPQ=15;MATEID=99143:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=2:93469219(-)-2:93647620(+)__2_93467501_93492501D;SPAN=178401;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:9:9:2.4:26.4,2.4,0:0:9:-26.41:26.41\n2\t93532754\t98636:2\tC\t]2:92875179]C\t37\tPASS\tDISC_MAPQ=22;EVDNC=DSCRD;IMPRECISE;MAPQ=22;MATEID=98636:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=2:92875179(+)-2:93532754(-)__2_92855001_92880001D;SPAN=657575;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:19:8:37.7,0,8:0:13:-38.44:38.44\n2\t93574645\t99223:1\tG\t]2:93889839]G\t39\tPASS\tDISC_MAPQ=16;EVDNC=DSCRD;IMPRECISE;MAPQ=16;MATEID=99223:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=2:93574645(-)-2:93889839(+)__2_93565501_93590501D;SPAN=315194;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:13:5:3.6:39.6,3.6,0:0:13:-39.61:39.61\n2\t93647620\t99143:2\tT\tT[2:93469219[\t26\tPASS\tDISC_MAPQ=17;EVDNC=DSCRD;IMPRECISE;MAPQ=17;MATEID=99143:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=2:93469219(-)-2:93647620(+)__2_93467501_93492501D;SPAN=178401;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:9:9:2.4:26.4,2.4,0:0:9:-26.41:26.41\n2\t93889839\t99223:2\tA\tA[2:93574645[\t39\tPASS\tDISC_MAPQ=16;EVDNC=DSCRD;IMPRECISE;MAPQ=16;MATEID=99223:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=2:93574645(-)-2:93889839(+)__2_93565501_93590501D;SPAN=315194;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:13:5:3.6:39.6,3.6,0:0:13:-39.61:39.61\n2\t94038860\t99636:1\tT\t]2:94087446]T\t29\tPASS\tDISC_MAPQ=22;EVDNC=DSCRD;IMPRECISE;MAPQ=22;MATEID=99636:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=2:94038860(-)-2:94087446(+)__2_94080001_94105001D;SPAN=48586;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:36:29.6:29.6,0,59.3:0:12:-29.49:30.1\n2\t94054277\t98519:2\tT\t]2:92743347]T\t14\tPASS\tDISC_MAPQ=15;EVDNC=DSCRD;IMPRECISE;MAPQ=15;MATEID=98519:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=2:92743347(+)-2:94054277(-)__2_92732501_92757501D;SPAN=1310930;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:42:14.6:14.6,0,90.5:0:8:-14.6:17.8\n2\t94087446\t99636:2\tC\tC[2:94038860[\t29\tPASS\tDISC_MAPQ=15;EVDNC=DSCRD;IMPRECISE;MAPQ=15;MATEID=99636:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=2:94038860(-)-2:94087446(+)__2_94080001_94105001D;SPAN=48586;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:36:29.6:29.6,0,59.3:0:12:-29.49:30.1\n2\t94089858\t99624:2\tA\t]2:93450067]A\t22\tPASS\tDISC_MAPQ=17;EVDNC=DSCRD;IMPRECISE;MAPQ=17;MATEID=99624:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=2:93450067(+)-2:94089858(-)__2_94080001_94105001D;SPAN=639791;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:13:9.5:22.7,0,9.5:0:8:-23.02:23.02\n2\t94189122\t99662:1\tC\t]20:27295507]C\t50\tPASS\tDISC_MAPQ=42;EVDNC=DSCRD;IMPRECISE;MAPQ=42;MATEID=99662:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=2:94189122(-)-20:27295507(+)__2_94178001_94203001D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:18:30:24.5:50.9,0,24.5:0:18:-51.49:51.49\n2\t94520458\t99799:1\tT\tT[2:94537151[\t61\tPASS\tDISC_MAPQ=17;EVDNC=ASDIS;HOMSEQ=ACATCACAAAGAAGTTTCTGAGAATGCTTCT;MAPQ=56;MATEID=99799:2;MATENM=0;NM=11;NUMPARTS=2;SCTG=c_2_94496501_94521501_88C;SPAN=16693;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:21:29:11.6:61.1,0,11.6:9:14:-63.06:63.06\n2\t94537151\t99799:2\tA\t]2:94520458]A\t61\tPASS\tDISC_MAPQ=255;EVDNC=ASDIS;HOMSEQ=ACATCACAAAGAAGTTTCTGAGAATGCTTCT;MAPQ=47;MATEID=99799:1;MATENM=11;NM=0;NUMPARTS=2;SCTG=c_2_94496501_94521501_88C;SPAN=16693;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:21:29:11.6:61.1,0,11.6:9:14:-63.06:63.06\n2\t95544969\t100172:1\tA\t[2:95545592[A\t87\tPASS\tDISC_MAPQ=56;EVDNC=DSCRD;IMPRECISE;MAPQ=56;MATEID=100172:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=2:95544969(-)-2:95545592(-)__2_95525501_95550501D;SPAN=623;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:31:53:44.6:87.5,0,44.6:0:31:-88.13:88.13\n2\t95545592\t100172:2\tC\t[2:95544969[C\t87\tPASS\tDISC_MAPQ=55;EVDNC=DSCRD;IMPRECISE;MAPQ=55;MATEID=100172:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=2:95544969(-)-2:95545592(-)__2_95525501_95550501D;SPAN=623;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:31:53:44.6:87.5,0,44.6:0:31:-88.13:88.13\n2\t95830277\t100286:1\tC\t]2:95957789]C\t39\tPASS\tEVDNC=ASSMB;HOMSEQ=CT;MAPQ=60;MATEID=100286:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_95942001_95967001_156C;SPAN=127512;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:15:36:39.5:39.5,0,49.4:15:0:-39.4:39.48\n2\t95957789\t100286:2\tT\tT[2:95830277[\t39\tPASS\tEVDNC=ASSMB;HOMSEQ=CT;MAPQ=60;MATEID=100286:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_95942001_95967001_156C;SPAN=127512;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:15:36:39.5:39.5,0,49.4:15:0:-39.4:39.48\n2\t95974103\t100699:1\tA\t]2:97572285]A\t25\tPASS\tDISC_MAPQ=15;EVDNC=DSCRD;IMPRECISE;MAPQ=15;MATEID=100699:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=2:95974103(-)-2:97572285(+)__2_97559001_97584001D;SPAN=1598182;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:14:9.2:25.7,0,9.2:0:9:-26.19:26.19\n2\t96816191\t100522:1\tA\t]2:96984406]A\t39\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=100522:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_96971001_96996001_45C;SPAN=168215;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:23:16.7:39.8,0,16.7:14:0:-40.18:40.18\n2\t96984406\t100522:2\tA\tA[2:96816191[\t39\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=100522:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_96971001_96996001_45C;SPAN=168215;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:23:16.7:39.8,0,16.7:14:0:-40.18:40.18\n2\t97123668\t100702:1\tT\t[2:97579760[T\t21\tPASS\tDISC_MAPQ=55;EVDNC=DSCRD;IMPRECISE;MAPQ=55;MATEID=100702:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=2:97123668(-)-2:97579760(-)__2_97559001_97584001D;SPAN=456092;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:29:21.5:21.5,0,51.2:0:9:-21.56:22.23\n2\t97194623\t100638:1\tA\t[2:97545900[A\t52\tPASS\tDISC_MAPQ=18;EVDNC=DSCRD;IMPRECISE;MAPQ=18;MATEID=100638:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=2:97194623(-)-2:97545900(-)__2_97191501_97216501D;SPAN=351277;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:18:26:12.5:52.1,0,12.5:0:18:-53.39:53.39\n2\t97204302\t100643:1\tG\tG[2:97208123[\t5\tPASS\tDISC_MAPQ=39;EVDNC=DSCRD;IMPRECISE;MAPQ=39;MATEID=100643:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=2:97204302(+)-2:97208123(-)__2_97191501_97216501D;SPAN=3821;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:75:5.3:5.3,0,183.5:0:8:-5.326:15.61\n2\t97208123\t100643:2\tA\t]2:97204302]A\t5\tPASS\tDISC_MAPQ=19;EVDNC=DSCRD;IMPRECISE;MAPQ=19;MATEID=100643:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=2:97204302(+)-2:97208123(-)__2_97191501_97216501D;SPAN=3821;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:75:5.3:5.3,0,183.5:0:8:-5.326:15.61\n2\t97545900\t100638:2\tA\t[2:97194623[A\t52\tPASS\tDISC_MAPQ=36;EVDNC=DSCRD;IMPRECISE;MAPQ=36;MATEID=100638:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=2:97194623(-)-2:97545900(-)__2_97191501_97216501D;SPAN=351277;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:18:26:12.5:52.1,0,12.5:0:18:-53.39:53.39\n2\t97572285\t100699:2\tA\tA[2:95974103[\t25\tPASS\tDISC_MAPQ=49;EVDNC=DSCRD;IMPRECISE;MAPQ=49;MATEID=100699:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=2:95974103(-)-2:97572285(+)__2_97559001_97584001D;SPAN=1598182;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:14:9.2:25.7,0,9.2:0:9:-26.19:26.19\n2\t97579760\t100702:2\tT\t[2:97123668[T\t21\tPASS\tDISC_MAPQ=49;EVDNC=DSCRD;IMPRECISE;MAPQ=49;MATEID=100702:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=2:97123668(-)-2:97579760(-)__2_97559001_97584001D;SPAN=456092;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:29:21.5:21.5,0,51.2:0:9:-21.56:22.23\n2\t98616869\t100962:1\tC\t]2:98691677]C\t24\tPASS\tEVDNC=ASSMB;INSERTION=C;MAPQ=60;MATEID=100962:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_98686001_98711001_0C;SPAN=74808;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:18:18.2:24.8,0,18.2:9:0:-24.67:24.67\n2\t98691677\t100962:2\tT\tT[2:98616869[\t24\tPASS\tEVDNC=ASSMB;INSERTION=C;MAPQ=60;MATEID=100962:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_98686001_98711001_0C;SPAN=74808;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:18:18.2:24.8,0,18.2:9:0:-24.67:24.67\n2\t101616122\t101893:1\tC\tC[2:101617126[\t69\tPASS\tEVDNC=ASSMB;HOMSEQ=ATC;MAPQ=60;MATEID=101893:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_101601501_101626501_121C;SPAN=1004;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:23:27:0.9:69.3,0.9,0:23:0:-72.66:72.66\n2\t101617126\t101893:2\tA\t]2:101616122]A\t69\tPASS\tEVDNC=ASSMB;HOMSEQ=ATC;MAPQ=60;MATEID=101893:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_101601501_101626501_121C;SPAN=1004;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:23:27:0.9:69.3,0.9,0:23:0:-72.66:72.66\n2\t102706037\t102218:1\tC\tC[2:102706360[\t58\tPASS\tEVDNC=ASSMB;HOMSEQ=AAGAATGAGTTCC;MAPQ=60;MATEID=102218:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_102704001_102729001_71C;SPAN=323;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:20:26:5.9:58.7,0,5.9:20:0:-61.11:61.11\n2\t102706360\t102218:2\tA\t]2:102706037]A\t58\tPASS\tEVDNC=ASSMB;HOMSEQ=AAGAATGAGTTCC;MAPQ=60;MATEID=102218:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_102704001_102729001_71C;SPAN=323;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:20:26:5.9:58.7,0,5.9:20:0:-61.11:61.11\n2\t104544191\t102679:1\tA\tA[2:104549876[\t35\tPASS\tEVDNC=ASSMB;HOMSEQ=A;MAPQ=60;MATEID=102679:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_104541501_104566501_111C;SPAN=5685;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:40:35:35,0,64.7:14:0:-34.97:35.49\n2\t104549876\t102679:2\tA\t]2:104544191]A\t35\tPASS\tEVDNC=ASSMB;HOMSEQ=A;MAPQ=60;MATEID=102679:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_104541501_104566501_111C;SPAN=5685;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:40:35:35,0,64.7:14:0:-34.97:35.49\n2\t106078622\t103313:1\tT\tT[2:106079439[\t38\tPASS\tEVDNC=ASSMB;HOMSEQ=T;MAPQ=60;MATEID=103313:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_106060501_106085501_2C;SPAN=817;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:27:28.7:38.6,0,28.7:14:0:-38.69:38.69\n2\t106079439\t103313:2\tT\t]2:106078622]T\t38\tPASS\tEVDNC=ASSMB;HOMSEQ=T;MAPQ=60;MATEID=103313:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_106060501_106085501_2C;SPAN=817;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:27:28.7:38.6,0,28.7:14:0:-38.69:38.69\n2\t108694098\t104171:1\tC\tC[2:108695654[\t50\tPASS\tEVDNC=ASSMB;HOMSEQ=C;MAPQ=60;MATEID=104171:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_108682001_108707001_109C;SPAN=1556;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:17:22:3.8:50,0,3.8:17:0:-52.01:52.01\n2\t108695654\t104171:2\tC\t]2:108694098]C\t50\tPASS\tEVDNC=ASSMB;HOMSEQ=C;MAPQ=60;MATEID=104171:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_108682001_108707001_109C;SPAN=1556;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:17:22:3.8:50,0,3.8:17:0:-52.01:52.01\n2\t110818831\t104698:1\tT\tT[2:110819060[\t40\tPASS\tEVDNC=ASSMB;HOMSEQ=TGAT;MAPQ=60;MATEID=104698:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_110813501_110838501_12C;SPAN=229;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:15:34:40.1:40.1,0,43.4:15:0:-39.96:39.98\n2\t110819060\t104698:2\tT\t]2:110818831]T\t40\tPASS\tEVDNC=ASSMB;HOMSEQ=TGAT;MAPQ=60;MATEID=104698:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_110813501_110838501_12C;SPAN=229;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:15:34:40.1:40.1,0,43.4:15:0:-39.96:39.98\n2\t112957280\t105463:1\tT\t]2:113032263]T\t25\tPASS\tEVDNC=ASSMB;HOMSEQ=TC;MAPQ=60;MATEID=105463:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_113018501_113043501_75C;SPAN=74983;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:26:25.7:25.7,0,38.9:10:0:-25.7:25.87\n2\t113032263\t105463:2\tC\tC[2:112957280[\t25\tPASS\tEVDNC=ASSMB;HOMSEQ=TC;MAPQ=60;MATEID=105463:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_113018501_113043501_75C;SPAN=74983;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:26:25.7:25.7,0,38.9:10:0:-25.7:25.87\n2\t113393765\t105599:1\tG\tG[2:113396035[\t99\tPASS\tDISC_MAPQ=42;EVDNC=ASDIS;HOMSEQ=AAAAACAGTATTGCTG;MAPQ=60;MATEID=105599:2;MATENM=0;NM=9;NUMPARTS=2;SCTG=c_2_113386001_113411001_46C;SPAN=2270;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:115:7:32.1:353.1,32.1,0:94:22:-353.2:353.2\n2\t113396035\t105599:2\tA\t]2:113393765]A\t99\tPASS\tDISC_MAPQ=30;EVDNC=ASDIS;HOMSEQ=AAAAACAGTATTGCTG;MAPQ=60;MATEID=105599:1;MATENM=9;NM=0;NUMPARTS=2;SCTG=c_2_113386001_113411001_46C;SPAN=2270;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:115:7:32.1:353.1,32.1,0:94:22:-353.2:353.2\n2\t114785557\t106020:1\tT\tT[2:114785773[\t28\tPASS\tEVDNC=ASSMB;INSERTION=GTTTGTTGTTCAGAATTTATTGTACTTTATT;MAPQ=60;MATEID=106020:2;MATENM=2;NM=1;NUMPARTS=2;SCTG=c_2_114782501_114807501_13C;SPAN=216;SUBN=1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:40:28.4:28.4,0,71.3:12:0:-28.37:29.43\n2\t114785773\t106020:2\tA\t]2:114785557]A\t28\tPASS\tEVDNC=ASSMB;INSERTION=GTTTGTTGTTCAGAATTTATTGTACTTTATT;MAPQ=60;MATEID=106020:1;MATENM=1;NM=2;NUMPARTS=2;SCTG=c_2_114782501_114807501_13C;SPAN=216;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:40:28.4:28.4,0,71.3:12:0:-28.37:29.43\n2\t115619092\t517334:1\tG\t]9:128694869]G\t27\tPASS\tEVDNC=ASSMB;HOMSEQ=GTCTCT;MAPQ=60;MATEID=517334:2;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_9_128674001_128699001_56C;SPAN=-1;SUBN=1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:32:27.5:27.5,0,50.6:11:0:-27.32:27.77\n2\t115619217\t517337:1\tA\tA]9:128696493]\t48\tPASS\tDISC_MAPQ=56;EVDNC=DSCRD;IMPRECISE;MAPQ=56;MATEID=517337:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=2:115619217(+)-9:128696493(+)__9_128674001_128699001D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:17:28:21.8:48.2,0,21.8:0:17:-48.77:48.77\n2\t115904500\t106447:1\tG\tG[2:115905081[\t65\tPASS\tEVDNC=ASSMB;INSERTION=G;MAPQ=60;MATEID=106447:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_115885001_115910001_118C;SPAN=581;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:23:38:29:65.3,0,29:23:0:-65.93:65.93\n2\t115905081\t106447:2\tA\t]2:115904500]A\t65\tPASS\tEVDNC=ASSMB;INSERTION=G;MAPQ=60;MATEID=106447:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_115885001_115910001_118C;SPAN=581;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:23:38:29:65.3,0,29:23:0:-65.93:65.93\n2\t116216764\t106565:1\tC\t[2:116224311[C\t53\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;INSERTION=AGT;MAPQ=60;MATEID=106565:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_2_116203501_116228501_71C;SPAN=7547;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:20:43:53.9:53.9,0,53.9:10:11:-53.93:53.93\n2\t116217058\t106566:1\tT\tT[2:116220728[\t42\tPASS\tEVDNC=ASSMB;HOMSEQ=T;MAPQ=60;MATEID=106566:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_116203501_116228501_42C;SPAN=3670;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:17:48:42.8:42.8,0,75.8:17:0:-42.62:43.2\n2\t116220728\t106566:2\tT\t]2:116217058]T\t42\tPASS\tEVDNC=ASSMB;HOMSEQ=T;MAPQ=60;MATEID=106566:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_116203501_116228501_42C;SPAN=3670;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:17:48:42.8:42.8,0,75.8:17:0:-42.62:43.2\n2\t116224311\t106565:2\tT\t[2:116216764[T\t53\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;INSERTION=AGT;MAPQ=60;MATEID=106565:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_2_116203501_116228501_71C;SPAN=7547;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:20:43:53.9:53.9,0,53.9:10:11:-53.93:53.93\n2\t117135487\t106904:1\tC\tC[2:117135814[\t30\tPASS\tEVDNC=ASSMB;HOMSEQ=AAGAAATACATCC;MAPQ=60;MATEID=106904:2;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_2_117134501_117159501_18C;SPAN=327;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:28:222:30.1:30.1,0,528.5:28:0:-30.03:56.82\n2\t117135814\t106904:2\tA\t]2:117135487]A\t30\tPASS\tEVDNC=ASSMB;HOMSEQ=AAGAAATACATCC;MAPQ=60;MATEID=106904:1;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_2_117134501_117159501_18C;SPAN=327;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:28:222:30.1:30.1,0,528.5:28:0:-30.03:56.82\n2\t117262101\t106966:1\tC\tC[2:117263734[\t22\tPASS\tEVDNC=ASSMB;HOMSEQ=C;MAPQ=60;MATEID=106966:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_2_117257001_117282001_22C;SPAN=1633;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:38:22.4:22.4,0,71.9:10:0:-22.33:23.85\n2\t117263734\t106966:2\tC\t]2:117262101]C\t22\tPASS\tEVDNC=ASSMB;HOMSEQ=C;MAPQ=60;MATEID=106966:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_2_117257001_117282001_22C;SPAN=1633;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:38:22.4:22.4,0,71.9:10:0:-22.33:23.85\n2\t117291982\t106977:1\tA\tA[2:117294929[\t17\tPASS\tEVDNC=ASSMB;HOMSEQ=AA;MAPQ=60;MATEID=106977:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_117281501_117306501_19C;SPAN=2947;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:34:17:17,0,66.5:8:0:-16.85:18.63\n2\t117294929\t106977:2\tA\t]2:117291982]A\t17\tPASS\tEVDNC=ASSMB;HOMSEQ=AA;MAPQ=60;MATEID=106977:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_117281501_117306501_19C;SPAN=2947;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:34:17:17,0,66.5:8:0:-16.85:18.63\n2\t117466294\t107039:1\tA\tA[2:117469493[\t68\tPASS\tEVDNC=ASSMB;HOMSEQ=CACA;MAPQ=60;MATEID=107039:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_117453001_117478001_40C;SPAN=3199;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:23:28:2:68,0,2:23:0:-71.75:71.75\n2\t117469493\t107039:2\tC\t]2:117466294]C\t68\tPASS\tEVDNC=ASSMB;HOMSEQ=CACA;MAPQ=60;MATEID=107039:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_117453001_117478001_40C;SPAN=3199;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:23:28:2:68,0,2:23:0:-71.75:71.75\n2\t118895753\t107559:1\tT\tT[2:118901793[\t46\tPASS\tEVDNC=ASSMB;HOMSEQ=CGGCACTGGCTT;MAPQ=60;MATEID=107559:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_118898501_118923501_3C;SPAN=6040;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:16:14:4.2:46.2,4.2,0:16:0:-46.21:46.21\n2\t118901793\t107559:2\tC\t]2:118895753]C\t46\tPASS\tEVDNC=ASSMB;HOMSEQ=CGGCACTGGCTT;MAPQ=60;MATEID=107559:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_118898501_118923501_3C;SPAN=6040;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:16:14:4.2:46.2,4.2,0:16:0:-46.21:46.21\n2\t119525207\t107732:1\tG\t]2:119525569]G\t26\tPASS\tEVDNC=ASSMB;HOMSEQ=G;MAPQ=60;MATEID=107732:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_119511001_119536001_108C;SPAN=362;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:48:26.3:26.3,0,92.3:12:0:-26.12:28.31\n2\t119525569\t107732:2\tG\tG[2:119525207[\t26\tPASS\tEVDNC=ASSMB;HOMSEQ=G;MAPQ=60;MATEID=107732:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_119511001_119536001_108C;SPAN=362;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:48:26.3:26.3,0,92.3:12:0:-26.12:28.31\n2\t119659504\t107766:1\tC\t]2:119660912]C\t78\tPASS\tDISC_MAPQ=58;EVDNC=ASDIS;INSERTION=GGC;MAPQ=60;MATEID=107766:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_119658001_119683001_112C;SPAN=1408;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:28:49:42.5:78.8,0,42.5:23:16:-79.16:79.16\n2\t119659624\t107767:1\tC\tC[2:119660920[\t39\tPASS\tEVDNC=ASSMB;HOMSEQ=GCC;MAPQ=60;MATEID=107767:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_2_119658001_119683001_83C;SPAN=1296;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:16:47:39.8:39.8,0,76.1:16:0:-39.61:40.32\n2\t119660912\t107766:2\tC\tC[2:119659504[\t78\tPASS\tDISC_MAPQ=57;EVDNC=ASDIS;INSERTION=GGC;MAPQ=60;MATEID=107766:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_119658001_119683001_112C;SPAN=1408;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:28:49:42.5:78.8,0,42.5:23:16:-79.16:79.16\n2\t119660920\t107767:2\tG\t]2:119659624]G\t39\tPASS\tEVDNC=ASSMB;HOMSEQ=GCC;MAPQ=60;MATEID=107767:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_2_119658001_119683001_83C;SPAN=1296;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:16:47:39.8:39.8,0,76.1:16:0:-39.61:40.32\n2\t120540055\t108111:1\tT\t]2:120753069]T\t34\tPASS\tEVDNC=ASSMB;INSERTION=ATAAGGGTCA;MAPQ=60;MATEID=108111:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_120736001_120761001_31C;SPAN=213014;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:19:11.3:34.4,0,11.3:12:0:-34.76:34.76\n2\t120753069\t108111:2\tT\tT[2:120540055[\t34\tPASS\tEVDNC=ASSMB;INSERTION=ATAAGGGTCA;MAPQ=60;MATEID=108111:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_120736001_120761001_31C;SPAN=213014;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:19:11.3:34.4,0,11.3:12:0:-34.76:34.76\n2\t121040233\t108217:1\tG\tG[2:121040824[\t24\tPASS\tEVDNC=ASSMB;HOMSEQ=CAGG;MAPQ=60;MATEID=108217:2;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_2_121030001_121055001_47C;SPAN=591;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:20:24.2:24.2,0,24.2:9:0:-24.09:24.09\n2\t121040824\t108217:2\tC\t]2:121040233]C\t24\tPASS\tEVDNC=ASSMB;HOMSEQ=CAGG;MAPQ=60;MATEID=108217:1;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_2_121030001_121055001_47C;SPAN=591;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:20:24.2:24.2,0,24.2:9:0:-24.09:24.09\n2\t122607302\t108621:1\tA\tA[2:122607801[\t82\tPASS\tEVDNC=ASSMB;INSERTION=ATGGCAAATTAAATCCACCCAAGTCTATCA;MAPQ=60;MATEID=108621:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_122598001_122623001_135C;SPAN=499;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:26:29:4.8:82.5,4.8,0:26:0:-83.85:83.85\n2\t122607801\t108621:2\tA\t]2:122607302]A\t82\tPASS\tEVDNC=ASSMB;INSERTION=ATGGCAAATTAAATCCACCCAAGTCTATCA;MAPQ=60;MATEID=108621:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_122598001_122623001_135C;SPAN=499;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:26:29:4.8:82.5,4.8,0:26:0:-83.85:83.85\n2\t122612412\t108622:1\tA\t]2:122613125]A\t35\tPASS\tDISC_MAPQ=58;EVDNC=DSCRD;IMPRECISE;MAPQ=58;MATEID=108622:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=2:122612412(-)-2:122613125(+)__2_122598001_122623001D;SPAN=713;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:39:35.3:35.3,0,61.7:0:14:-35.25:35.68\n2\t122612418\t108624:1\tG\tG[2:122612766[\t44\tPASS\tEVDNC=ASSMB;HOMSEQ=TGG;MAPQ=60;MATEID=108624:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_122598001_122623001_26C;SPAN=348;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:16:31:31.1:44.3,0,31.1:16:0:-44.17:44.17\n2\t122612766\t108624:2\tT\t]2:122612418]T\t44\tPASS\tEVDNC=ASSMB;HOMSEQ=TGG;MAPQ=60;MATEID=108624:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_122598001_122623001_26C;SPAN=348;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:16:31:31.1:44.3,0,31.1:16:0:-44.17:44.17\n2\t122613125\t108622:2\tA\tA[2:122612412[\t35\tPASS\tDISC_MAPQ=58;EVDNC=DSCRD;IMPRECISE;MAPQ=58;MATEID=108622:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=2:122612412(-)-2:122613125(+)__2_122598001_122623001D;SPAN=713;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:39:35.3:35.3,0,61.7:0:14:-35.25:35.68\n2\t122719026\t108679:1\tG\t[2:122724930[G\t62\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=GA;MAPQ=60;MATEID=108679:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_122720501_122745501_3C;SPAN=5904;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:21:19:5.7:62.7,5.7,0:12:16:-62.72:62.72\n2\t122724930\t108679:2\tT\t[2:122719026[T\t62\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=GA;MAPQ=60;MATEID=108679:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_122720501_122745501_3C;SPAN=5904;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:21:19:5.7:62.7,5.7,0:12:16:-62.72:62.72\n2\t124294183\t109318:1\tT\t[2:124295338[T\t99\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;INSERTION=GTAGG;MAPQ=60;MATEID=109318:2;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_2_124288501_124313501_27C;SPAN=1155;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:45:45:12.6:138.6,12.6,0:32:18:-138.6:138.6\n2\t124295338\t109318:2\tC\t[2:124294183[C\t99\tPASS\tDISC_MAPQ=56;EVDNC=ASDIS;INSERTION=GTAGG;MAPQ=60;MATEID=109318:1;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_2_124288501_124313501_27C;SPAN=1155;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:45:45:12.6:138.6,12.6,0:32:18:-138.6:138.6\n2\t125008984\t109599:1\tC\tC[2:125010671[\t99\tPASS\tEVDNC=ASSMB;HOMSEQ=C;MAPQ=60;MATEID=109599:2;MATENM=0;NM=8;NUMPARTS=2;SCTG=c_2_124999001_125024001_30C;SPAN=1687;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:38:50:12.5:111.5,0,12.5:38:0:-115.7:115.7\n2\t125008985\t109602:1\tA\t]2:125010824]A\t99\tPASS\tEVDNC=ASSMB;INSERTION=TCTATACTCACTACTACACTAT;MAPQ=60;MATEID=109602:2;MATENM=0;NM=5;NUMPARTS=2;SCTG=c_2_124999001_125024001_27C;SPAN=1839;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:50:36:13.8:151.8,13.8,0:50:0:-151.8:151.8\n2\t125010671\t109599:2\tC\t]2:125008984]C\t99\tPASS\tEVDNC=ASSMB;HOMSEQ=C;MAPQ=60;MATEID=109599:1;MATENM=8;NM=0;NUMPARTS=2;SCTG=c_2_124999001_125024001_30C;SPAN=1687;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:38:50:12.5:111.5,0,12.5:38:0:-115.7:115.7\n2\t125010824\t109602:2\tC\tC[2:125008985[\t99\tPASS\tEVDNC=ASSMB;INSERTION=TCTATACTCACTACTACACTAT;MAPQ=60;MATEID=109602:1;MATENM=5;NM=0;NUMPARTS=2;SCTG=c_2_124999001_125024001_27C;SPAN=1839;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:50:36:13.8:151.8,13.8,0:50:0:-151.8:151.8\n2\t125013432\t471947:1\tA\t[8:117667362[A\t92\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;INSERTION=AAATAAAAT;MAPQ=60;MATEID=471947:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_117649001_117674001_5C;SPAN=-1;SUBN=1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:31:26:8.4:92.4,8.4,0:27:7:-92.42:92.42\n2\t125276952\t109688:1\tA\t]2:125284312]A\t24\tPASS\tDISC_MAPQ=32;EVDNC=ASDIS;MAPQ=60;MATEID=109688:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_2_125268501_125293501_20C;SPAN=7360;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:42:24.5:24.5,0,80.6:9:7:-24.51:26.21\n2\t125284312\t109688:2\tT\tT[2:125276952[\t24\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;MAPQ=60;MATEID=109688:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_2_125268501_125293501_20C;SPAN=7360;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:42:24.5:24.5,0,80.6:9:7:-24.51:26.21\n2\t125685674\t109860:1\tC\tC[2:125694255[\t99\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TAAC;MAPQ=60;MATEID=109860:2;MATENM=2;NM=1;NUMPARTS=2;SCTG=c_2_125660501_125685501_31C;SPAN=8581;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:42:0:11.7:128.7,11.7,0:30:17:-128.7:128.7\n2\t125694255\t109860:2\tT\t]2:125685674]T\t99\tPASS\tDISC_MAPQ=59;EVDNC=ASDIS;HOMSEQ=TAAC;MAPQ=60;MATEID=109860:1;MATENM=1;NM=2;NUMPARTS=2;SCTG=c_2_125660501_125685501_31C;SPAN=8581;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:42:0:11.7:128.7,11.7,0:30:17:-128.7:128.7\n2\t125852537\t109909:1\tG\tG[2:125866487[\t28\tPASS\tEVDNC=ASSMB;HOMSEQ=TTG;MAPQ=60;MATEID=109909:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_125856501_125881501_11C;SPAN=13950;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:16:8.9:28.7,0,8.9:10:0:-28.89:28.89\n2\t125866487\t109909:2\tT\t]2:125852537]T\t28\tPASS\tEVDNC=ASSMB;HOMSEQ=TTG;MAPQ=60;MATEID=109909:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_125856501_125881501_11C;SPAN=13950;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:16:8.9:28.7,0,8.9:10:0:-28.89:28.89\n2\t126315750\t989664:1\tG\t]Un_KN707841v1_decoy:8992]G\t33\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=989664:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_692_1_8992_0C;SPAN=-1;SUBN=6;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:11:3:3:33,3,0:11:0:-33.01:33.01\n2\t126315751\t110043:1\tT\tT[Un_KN707841v1_decoy:1[\t46\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=110043:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_126297501_126322501_42C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:16:23:10.1:46.4,0,10.1:16:0:-47.52:47.52\n2\t126917182\t110225:1\tC\tC[2:126919697[\t51\tPASS\tEVDNC=ASSMB;HOMSEQ=TC;MAPQ=60;MATEID=110225:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_2_126910001_126935001_60C;SPAN=2515;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:18:27:15.5:51.8,0,15.5:18:0:-52.86:52.86\n2\t126919697\t110225:2\tT\t]2:126917182]T\t51\tPASS\tEVDNC=ASSMB;HOMSEQ=TC;MAPQ=60;MATEID=110225:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_2_126910001_126935001_60C;SPAN=2515;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:18:27:15.5:51.8,0,15.5:18:0:-52.86:52.86\n2\t127188819\t110351:1\tA\t]2:127316157]A\t56\tPASS\tDISC_MAPQ=59;EVDNC=DSCRD;IMPRECISE;MAPQ=59;MATEID=110351:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=2:127188819(-)-2:127316157(+)__2_127302001_127327001D;SPAN=127338;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:18:21:2.4:56.1,2.4,0:0:18:-57:57\n2\t127316157\t110351:2\tT\tT[2:127188819[\t56\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=110351:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=2:127188819(-)-2:127316157(+)__2_127302001_127327001D;SPAN=127338;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:18:21:2.4:56.1,2.4,0:0:18:-57:57\n2\t128082406\t110651:1\tC\tC[3:185432358[\t66\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TTTTTGTGTTTTTAGTAGAGACAGGGTTTCAC;MAPQ=60;MATEID=110651:2;MATENM=2;NM=6;NUMPARTS=2;SCTG=c_2_128061501_128086501_81C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:22:13:6:66,6,0:18:9:-66.02:66.02\n2\t128792240\t110897:1\tC\t]2:128792506]C\t9\tPASS\tDISC_MAPQ=22;EVDNC=ASDIS;HOMSEQ=CACAGTGTCTCACACACACATCCACACA;MAPQ=60;MATEID=110897:2;MATENM=7;NM=2;NUMPARTS=2;SCTG=c_2_128772001_128797001_8C;SPAN=266;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:7:48:9.8:9.8,0,108.8:5:2:-9.615:14.68\n2\t128792369\t110900:1\tC\tC[2:128792446[\t18\tPASS\tEVDNC=ASSMB;INSERTION=GCACAGTGTCTCA;MAPQ=33;MATEID=110900:2;MATENM=7;NM=2;NUMPARTS=2;SCTG=c_2_128772001_128797001_44C;SPAN=77;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:51:18.8:18.8,0,107.9:10:0:-18.67:22.39\n2\t128792402\t110902:1\tA\tA[2:128792446[\t6\tPASS\tDISC_MAPQ=255;EVDNC=TSI_L;HOMSEQ=CACACACATGCACACACA;MAPQ=45;MATEID=110902:2;MATENM=7;NM=5;NUMPARTS=3;REPSEQ=ACACACAC;SCTG=c_2_128772001_128797001_60C;SPAN=44;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:51:6:6,0,59.8:10:0:-5.664:9.489\n2\t128792446\t110900:2\tC\t]2:128792369]C\t18\tPASS\tEVDNC=ASSMB;INSERTION=GCACAGTGTCTCA;MAPQ=60;MATEID=110900:1;MATENM=2;NM=7;NUMPARTS=2;SCTG=c_2_128772001_128797001_44C;SPAN=77;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:51:18.8:18.8,0,107.9:10:0:-18.67:22.39\n2\t128792446\t110902:2\tC\t]2:128792402]C\t6\tPASS\tDISC_MAPQ=255;EVDNC=TSI_L;HOMSEQ=CACACACATGCACACACA;MAPQ=60;MATEID=110902:1;MATENM=5;NM=7;NUMPARTS=3;REPSEQ=ACACACAC;SCTG=c_2_128772001_128797001_60C;SPAN=44;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:51:6:6,0,59.8:10:0:-5.664:9.489\n2\t128792446\t110905:1\tC\t]2:128792506]C\t53\tPASS\tDISC_MAPQ=255;EVDNC=TSI_G;HOMSEQ=CACACACATGCACACACA;INSERTION=CAGTGTCTCTCACAAAGACCTCTCACACACACACATCCACACACATGCACAGTGTCACACACATCTCACACACGCACACAGTGTCA;MAPQ=60;MATEID=110905:2;MATENM=3;NM=7;NUMPARTS=3;SCTG=c_2_128772001_128797001_60C;SPAN=60;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:20:45:53.3:53.3,0,59.9:20:0:-53.37:53.39\n2\t128792506\t110897:2\tA\tA[2:128792240[\t9\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=CACAGTGTCTCACACACACATCCACACA;MAPQ=60;MATEID=110897:1;MATENM=2;NM=7;NUMPARTS=2;SCTG=c_2_128772001_128797001_8C;SPAN=266;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:7:48:9.8:9.8,0,108.8:5:2:-9.615:14.68\n2\t128792506\t110905:2\tA\tA[2:128792446[\t53\tPASS\tDISC_MAPQ=255;EVDNC=TSI_G;HOMSEQ=CACACACATGCACACACA;INSERTION=CAGTGTCTCTCACAAAGACCTCTCACACACACACATCCACACACATGCACAGTGTCACACACATCTCACACACGCACACAGTGTCA;MAPQ=60;MATEID=110905:1;MATENM=7;NM=3;NUMPARTS=3;SCTG=c_2_128772001_128797001_60C;SPAN=60;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:20:45:53.3:53.3,0,59.9:20:0:-53.37:53.39\n2\t1289275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2\t875478:1\tG\tG[20:30502676[\t59\tPASS\tDISC_MAPQ=49;EVDNC=DSCRD;IMPRECISE;MAPQ=49;MATEID=875478:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=2:132270852(+)-20:30502676(-)__20_30502501_30527501D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:18:20:5.4:59.4,5.4,0:0:18:-58.15:58.15\n2\t132544930\t112605:1\tC\t]2:132883250]C\t15\tPASS\tDISC_MAPQ=58;EVDNC=ASDIS;HOMSEQ=CATG;MAPQ=60;MATEID=112605:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_132863501_132888501_16C;SPAN=338320;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:6:17:15.2:15.2,0,25.1:4:4:-15.03:15.24\n2\t132883250\t112605:2\tG\tG[2:132544930[\t15\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=CATG;MAPQ=60;MATEID=112605:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_132863501_132888501_16C;SPAN=338320;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:6:17:15.2:15.2,0,25.1:4:4:-15.03:15.24\n2\t133005391\t112633:1\tC\tC[2:133006981[\t20\tPASS\tEVDNC=ASSMB;INSERTION=AAACAACAAAAAATTATT;MAPQ=60;MATEID=112633:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_132986001_133011001_15C;SPAN=1590;SUBN=2;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:33:20.6:20.6,0,60.2:9:0:-20.43:21.63\n2\t133006981\t112633:2\tT\t]2:133005391]T\t20\tPASS\tEVDNC=ASSMB;INSERTION=AAACAACAAAAAATTATT;MAPQ=60;MATEID=112633:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_132986001_133011001_15C;SPAN=1590;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:33:20.6:20.6,0,60.2:9:0:-20.43:21.63\n2\t133212138\t112700:1\tG\t]2:133287509]G\t19\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=GA;MAPQ=60;MATEID=112700:2;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_2_133280001_133305001_15C;SPAN=75371;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:25:19.4:19.4,0,42.5:7:2:-19.38:19.89\n2\t133287509\t112700:2\tA\tA[2:133212138[\t19\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=GA;MAPQ=60;MATEID=112700:1;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_2_133280001_133305001_15C;SPAN=75371;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:25:19.4:19.4,0,42.5:7:2:-19.38:19.89\n2\t133702708\t112810:1\tT\tT[2:133703001[\t95\tPASS\tEVDNC=ASSMB;HOMSEQ=CTCGTCTCTTTTTCT;MAPQ=60;MATEID=112810:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_2_133696501_133721501_7C;SPAN=293;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:32:18:8.7:95.7,8.7,0:32:0:-95.72:95.72\n2\t133703001\t112810:2\tC\t]2:133702708]C\t95\tPASS\tEVDNC=ASSMB;HOMSEQ=CTCGTCTCTTTTTCT;MAPQ=60;MATEID=112810:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_2_133696501_133721501_7C;SPAN=293;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:32:18:8.7:95.7,8.7,0:32:0:-95.72:95.72\n2\t133786720\t112839:1\tA\tA[2:133787036[\t37\tPASS\tEVDNC=ASSMB;HOMSEQ=AAATAATTGATGATTTA;MAPQ=60;MATEID=112839:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_133770001_133795001_54C;SPAN=316;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:16:55:37.4:37.4,0,100.1:16:0:-37.36:38.98\n2\t133787036\t112839:2\tA\t]2:133786720]A\t37\tPASS\tEVDNC=ASSMB;HOMSEQ=AAATAATTGATGATTTA;MAPQ=60;MATEID=112839:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_133770001_133795001_54C;SPAN=316;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:16:55:37.4:37.4,0,100.1:16:0:-37.36:38.98\n2\t134209146\t112961:1\tT\tT[2:134212560[\t29\tPASS\tEVDNC=ASSMB;HOMSEQ=AGAACTGGCTTATTTTT;MAPQ=60;MATEID=112961:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_134211001_134236001_46C;SPAN=3414;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:9:10:2.7:29.7,2.7,0:9:0:-29.08:29.08\n2\t134212560\t112961:2\tA\t]2:134209146]A\t29\tPASS\tEVDNC=ASSMB;HOMSEQ=AGAACTGGCTTATTTTT;MAPQ=60;MATEID=112961:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_134211001_134236001_46C;SPAN=3414;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:9:10:2.7:29.7,2.7,0:9:0:-29.08:29.08\n2\t134524328\t113044:1\tG\tG[2:134525016[\t53\tPASS\tEVDNC=ASSMB;HOMSEQ=G;MAPQ=60;MATEID=113044:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_134505001_134530001_4C;SPAN=688;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:19:34:30.2:53.3,0,30.2:19:0:-53.43:53.43\n2\t134525016\t113044:2\tG\t]2:134524328]G\t53\tPASS\tEVDNC=ASSMB;HOMSEQ=G;MAPQ=60;MATEID=113044:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_134505001_134530001_4C;SPAN=688;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:19:34:30.2:53.3,0,30.2:19:0:-53.43:53.43\n2\t134921604\t113147:1\tT\tT[2:134923614[\t13\tPASS\tEVDNC=ASSMB;HOMSEQ=GCCT;MAPQ=60;MATEID=113147:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_134921501_134946501_50C;SPAN=2010;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:46:13.7:13.7,0,99.5:8:0:-13.48:17.45\n2\t134923614\t113147:2\tG\t]2:134921604]G\t13\tPASS\tEVDNC=ASSMB;HOMSEQ=GCCT;MAPQ=60;MATEID=113147:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_134921501_134946501_50C;SPAN=2010;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:46:13.7:13.7,0,99.5:8:0:-13.48:17.45\n2\t137225736\t113732:1\tT\tT[2:137226890[\t48\tPASS\tEVDNC=ASSMB;HOMSEQ=AT;MAPQ=60;MATEID=113732:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_137224501_137249501_17C;SPAN=1154;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:17:27:18.8:48.5,0,18.8:17:0:-49.21:49.21\n2\t137226890\t113732:2\tA\t]2:137225736]A\t48\tPASS\tEVDNC=ASSMB;HOMSEQ=AT;MAPQ=60;MATEID=113732:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_137224501_137249501_17C;SPAN=1154;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:17:27:18.8:48.5,0,18.8:17:0:-49.21:49.21\n2\t138199265\t114138:1\tA\t]2:138199333]A\t33\tPASS\tEVDNC=ASSMB;HOMSEQ=A;MAPQ=60;MATEID=114138:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_138180001_138205001_40C;SPAN=68;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:35:33.2:33.2,0,53:13:0:-33.08:33.38\n2\t138199333\t114138:2\tA\tA[2:138199265[\t33\tPASS\tEVDNC=ASSMB;HOMSEQ=A;MAPQ=60;MATEID=114138:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_138180001_138205001_40C;SPAN=68;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:35:33.2:33.2,0,53:13:0:-33.08:33.38\n2\t140883094\t115249:1\tC\t]2:140942060]C\t46\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;INSERTION=ATAGAAT;MAPQ=60;MATEID=115249:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_140924001_140949001_4C;SPAN=58966;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:15:18:1.5:46.2,1.5,0:8:12:-47.02:47.02\n2\t140942060\t115249:2\tA\tA[2:140883094[\t46\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;INSERTION=ATAGAAT;MAPQ=60;MATEID=115249:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_140924001_140949001_4C;SPAN=58966;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:15:18:1.5:46.2,1.5,0:8:12:-47.02:47.02\n2\t141095450\t115326:2\tA\tA]1:118858672]\t42\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=115326:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:118858672(+)-2:141095450(+)__2_141071001_141096001D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:14:12:3.9:42.9,3.9,0:0:14:-42.91:42.91\n2\t141141086\t115406:1\tT\tT[2:141224396[\t39\tPASS\tEVDNC=ASSMB;HOMSEQ=AGTT;MAPQ=60;MATEID=115406:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_2_141218001_141243001_34C;SPAN=83310;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:13:13:3.6:39.6,3.6,0:13:0:-39.61:39.61\n2\t141211129\t115452:1\tA\tA[2:141354574[\t22\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=A;MAPQ=60;MATEID=115452:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_2_141340501_141365501_3C;SPAN=143445;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:16:15.5:22.1,0,15.5:5:4:-21.93:21.93\n2\t141224396\t115406:2\tA\t]2:141141086]A\t39\tPASS\tEVDNC=ASSMB;HOMSEQ=AGTT;MAPQ=60;MATEID=115406:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_2_141218001_141243001_34C;SPAN=83310;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:13:13:3.6:39.6,3.6,0:13:0:-39.61:39.61\n2\t141354574\t115452:2\tA\t]2:141211129]A\t22\tPASS\tDISC_MAPQ=57;EVDNC=ASDIS;HOMSEQ=A;MAPQ=60;MATEID=115452:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_2_141340501_141365501_3C;SPAN=143445;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:16:15.5:22.1,0,15.5:5:4:-21.93:21.93\n2\t142677053\t115964:1\tT\tT[2:142677375[\t48\tPASS\tEVDNC=ASSMB;HOMSEQ=CAAAGCTTTCATTTTTT;MAPQ=60;MATEID=115964:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_2_142663501_142688501_29C;SPAN=322;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:20:62:48.8:48.8,0,104.9:20:0:-48.59:49.82\n2\t142677375\t115964:2\tC\t]2:142677053]C\t48\tPASS\tEVDNC=ASSMB;HOMSEQ=CAAAGCTTTCATTTTTT;MAPQ=60;MATEID=115964:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_2_142663501_142688501_29C;SPAN=322;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:20:62:48.8:48.8,0,104.9:20:0:-48.59:49.82\n2\t143253785\t835731:1\tA\tA]18:71950157]\t36\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=835731:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=2:143253785(+)-18:71950157(+)__18_71932001_71957001D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:12:6:3.3:36.3,3.3,0:0:12:-36.31:36.31\n2\t144160369\t116411:1\tA\t]2:144160541]A\t19\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=116411:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_144158001_144183001_13C;SPAN=172;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:38:19.1:19.1,0,75.2:9:0:-19.03:20.99\n2\t144160541\t116411:2\tC\tC[2:144160369[\t19\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=116411:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_144158001_144183001_13C;SPAN=172;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:38:19.1:19.1,0,75.2:9:0:-19.03:20.99\n2\t144833448\t116606:1\tT\tT[2:144835123[\t17\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=116606:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=2:144833448(+)-2:144835123(-)__2_144819501_144844501D;SPAN=1675;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:34:17:17,0,66.5:0:8:-16.85:18.63\n2\t144835123\t116606:2\tG\t]2:144833448]G\t17\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=116606:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=2:144833448(+)-2:144835123(-)__2_144819501_144844501D;SPAN=1675;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:34:17:17,0,66.5:0:8:-16.85:18.63\n2\t145668177\t116850:1\tA\t]2:145716276]A\t33\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;MAPQ=60;MATEID=116850:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_2_145701501_145726501_17C;SPAN=48099;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:23:23.3:33.2,0,23.3:10:9:-33.21:33.21\n2\t145716276\t116850:2\tT\tT[2:145668177[\t33\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;MAPQ=60;MATEID=116850:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_2_145701501_145726501_17C;SPAN=48099;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:23:23.3:33.2,0,23.3:10:9:-33.21:33.21\n2\t146105053\t117026:1\tT\tT[2:146119295[\t35\tPASS\tEVDNC=ASSMB;HOMSEQ=GT;MAPQ=60;MATEID=117026:2;MATENM=3;NM=0;NUMPARTS=2;SCTG=c_2_146118001_146143001_26C;SPAN=14242;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:16:2.3:35.3,0,2.3:12:0:-36.39:36.39\n2\t146119295\t117026:2\tG\t]2:146105053]G\t35\tPASS\tEVDNC=ASSMB;HOMSEQ=GT;MAPQ=60;MATEID=117026:1;MATENM=0;NM=3;NUMPARTS=2;SCTG=c_2_146118001_146143001_26C;SPAN=14242;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:16:2.3:35.3,0,2.3:12:0:-36.39:36.39\n2\t148379770\t117653:1\tA\t]2:148427543]A\t31\tPASS\tDISC_MAPQ=48;EVDNC=ASDIS;INSERTION=T;MAPQ=60;MATEID=117653:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_148372001_148397001_19C;SPAN=47773;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:28:31.7:31.7,0,38.3:11:8:-31.74:31.78\n2\t148427543\t117653:2\tA\tA[2:148379770[\t31\tPASS\tDISC_MAPQ=36;EVDNC=ASDIS;INSERTION=T;MAPQ=47;MATEID=117653:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_148372001_148397001_19C;SPAN=47773;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:28:31.7:31.7,0,38.3:11:8:-31.74:31.78\n2\t150174624\t118294:1\tT\tT[2:150181733[\t99\tPASS\tEVDNC=ASSMB;INSERTION=T;MAPQ=60;MATEID=118294:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_150160501_150185501_19C;SPAN=7109;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:34:39:4.2:105.6,4.2,0:34:0:-108.4:108.4\n2\t150181733\t118294:2\tG\t]2:150174624]G\t99\tPASS\tEVDNC=ASSMB;INSERTION=T;MAPQ=60;MATEID=118294:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_150160501_150185501_19C;SPAN=7109;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:34:39:4.2:105.6,4.2,0:34:0:-108.4:108.4\n2\t151184691\t118701:1\tT\tT[2:151184979[\t44\tPASS\tEVDNC=ASSMB;HOMSEQ=T;MAPQ=60;MATEID=118701:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_151165001_151190001_57C;SPAN=288;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:18:55:44:44,0,93.5:18:0:-43.96:44.97\n2\t151184979\t118701:2\tT\t]2:151184691]T\t44\tPASS\tEVDNC=ASSMB;HOMSEQ=T;MAPQ=60;MATEID=118701:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_151165001_151190001_57C;SPAN=288;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:18:55:44:44,0,93.5:18:0:-43.96:44.97\n2\t154039258\t119963:1\tG\tG[2:154042666[\t65\tPASS\tEVDNC=ASSMB;INSERTION=GATT;MAPQ=60;MATEID=119963:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_2_154031501_154056501_62C;SPAN=3408;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:25:61:65.6:65.6,0,85.4:25:0:-65.38:65.57\n2\t154042666\t119963:2\tA\t]2:154039258]A\t65\tPASS\tEVDNC=ASSMB;INSERTION=GATT;MAPQ=60;MATEID=119963:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_2_154031501_154056501_62C;SPAN=3408;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:25:61:65.6:65.6,0,85.4:25:0:-65.38:65.57\n2\t154150374\t125028:1\tT\t[2:166690583[T\t99\tPASS\tDISC_MAPQ=19;EVDNC=ASDIS;INSERTION=A;MAPQ=47;MATEID=125028:2;MATENM=10;NM=0;NUMPARTS=2;SCTG=c_2_166673501_166698501_5C;SPAN=12540209;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:69:21:19.2:211.2,19.2,0:64:17:-211.3:211.3\n2\t155019728\t120494:1\tA\t]2:155343836]A\t34\tPASS\tDISC_MAPQ=255;EVDNC=ASDIS;MAPQ=60;MATEID=120494:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_155330001_155355001_14C;SPAN=324108;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:31:34.4:34.4,0,41:9:10:-34.2:34.27\n2\t155034681\t120386:1\tT\tT[2:155034983[\t99\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=CTGCTGTTACTTTTT;MAPQ=60;MATEID=120386:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_155011501_155036501_107C;SPAN=302;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:47:59:9.8:138.5,0,9.8:41:12:-145.2:145.2\n2\t155034983\t120386:2\tC\t]2:155034681]C\t99\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=CTGCTGTTACTTTTT;MAPQ=60;MATEID=120386:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_155011501_155036501_107C;SPAN=302;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:47:59:9.8:138.5,0,9.8:41:12:-145.2:145.2\n2\t155343836\t120494:2\tG\tG[2:155019728[\t34\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;MAPQ=60;MATEID=120494:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_155330001_155355001_14C;SPAN=324108;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:31:34.4:34.4,0,41:9:10:-34.2:34.27\n2\t157171629\t940773:1\tA\t]X:105542844]A\t29\tPASS\tEVDNC=ASSMB;HOMSEQ=AAAAT;MAPQ=60;MATEID=940773:2;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_23_105521501_105546501_0C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:10:10:2.7:29.7,2.7,0:10:0:-29.71:29.71\n2\t157576837\t121345:1\tT\tT[2:157577155[\t99\tPASS\tEVDNC=ASSMB;HOMSEQ=TGAAATTTTCTT;MAPQ=60;MATEID=121345:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_157559501_157584501_73C;SPAN=318;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:43:44:12.3:135.3,12.3,0:43:0:-135.3:135.3\n2\t157577155\t121345:2\tT\t]2:157576837]T\t99\tPASS\tEVDNC=ASSMB;HOMSEQ=TGAAATTTTCTT;MAPQ=60;MATEID=121345:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_157559501_157584501_73C;SPAN=318;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:43:44:12.3:135.3,12.3,0:43:0:-135.3:135.3\n2\t158805484\t121844:1\tC\tC[2:158806361[\t60\tPASS\tEVDNC=ASSMB;HOMSEQ=GC;MAPQ=60;MATEID=121844:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_2_158784501_158809501_18C;SPAN=877;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:23:55:60.5:60.5,0,77:23:0:-60.46:60.59\n2\t158806361\t121844:2\tG\t]2:158805484]G\t60\tPASS\tEVDNC=ASSMB;HOMSEQ=GC;MAPQ=60;MATEID=121844:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_2_158784501_158809501_18C;SPAN=877;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:23:55:60.5:60.5,0,77:23:0:-60.46:60.59\n2\t159292615\t122074:1\tC\tC[2:159295138[\t99\tPASS\tEVDNC=ASSMB;HOMSEQ=TAGAATTTC;MAPQ=60;MATEID=122074:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_2_159274501_159299501_119C;SPAN=2523;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:36:42:1.8:108.9,1.8,0:36:0:-114:114\n2\t159295138\t122074:2\tT\t]2:159292615]T\t99\tPASS\tEVDNC=ASSMB;HOMSEQ=TAGAATTTC;MAPQ=60;MATEID=122074:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_2_159274501_159299501_119C;SPAN=2523;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:36:42:1.8:108.9,1.8,0:36:0:-114:114\n2\t161095746\t122996:2\tC\tC]1:32790315]\t19\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=122996:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:32790315(+)-2:161095746(+)__2_161087501_161112501D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:24:19.7:19.7,0,39.5:0:8:-19.66:20.07\n2\t161386035\t123118:1\tA\tA[2:161388256[\t16\tPASS\tEVDNC=ASSMB;HOMSEQ=AAAA;MAPQ=60;MATEID=123118:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_161381501_161406501_28C;SPAN=2221;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:58:16.7:16.7,0,128.9:10:0:-16.71:21.77\n2\t161388256\t123118:2\tA\t]2:161386035]A\t16\tPASS\tEVDNC=ASSMB;HOMSEQ=AAAA;MAPQ=60;MATEID=123118:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_161381501_161406501_28C;SPAN=2221;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:58:16.7:16.7,0,128.9:10:0:-16.71:21.77\n2\t161475875\t123145:1\tC\tC[2:161477530[\t99\tPASS\tDISC_MAPQ=55;EVDNC=DSCRD;IMPRECISE;MAPQ=55;MATEID=123145:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=2:161475875(+)-2:161477530(-)__2_161455001_161480001D;SPAN=1655;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:77:15:21.3:234.3,21.3,0:0:77:-234.4:234.4\n2\t161477530\t123145:2\tG\t]2:161475875]G\t99\tPASS\tDISC_MAPQ=58;EVDNC=DSCRD;IMPRECISE;MAPQ=58;MATEID=123145:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=2:161475875(+)-2:161477530(-)__2_161455001_161480001D;SPAN=1655;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:77:15:21.3:234.3,21.3,0:0:77:-234.4:234.4\n2\t162753054\t123497:1\tC\tC]9:24546560]\t17\tPASS\tDISC_MAPQ=23;EVDNC=DSCRD;IMPRECISE;MAPQ=23;MATEID=123497:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=2:162753054(+)-9:24546560(+)__2_162729001_162754001D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:34:17:17,0,66.5:0:8:-16.85:18.63\n2\t165158185\t124267:1\tG\tG[2:165160235[\t67\tPASS\tEVDNC=ASSMB;HOMSEQ=TG;MAPQ=60;MATEID=124267:2;MATENM=3;NM=0;NUMPARTS=2;SCTG=c_2_165154501_165179501_143C;SPAN=2050;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:25:55:67.1:67.1,0,70.4:25:0:-67.07:67.07\n2\t165160235\t124267:2\tT\t]2:165158185]T\t67\tPASS\tEVDNC=ASSMB;HOMSEQ=TG;MAPQ=60;MATEID=124267:1;MATENM=0;NM=3;NUMPARTS=2;SCTG=c_2_165154501_165179501_143C;SPAN=2050;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:25:55:67.1:67.1,0,70.4:25:0:-67.07:67.07\n2\t165411013\t124385:1\tC\tC[2:165411322[\t99\tPASS\tEVDNC=ASSMB;HOMSEQ=AAAAGCTCCAGACCC;MAPQ=60;MATEID=124385:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_165399501_165424501_116C;SPAN=309;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:35:42:1.4:103.7,0,1.4:35:0:-109.7:109.7\n2\t165411322\t124385:2\tA\t]2:165411013]A\t99\tPASS\tEVDNC=ASSMB;HOMSEQ=AAAAGCTCCAGACCC;MAPQ=60;MATEID=124385:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_165399501_165424501_116C;SPAN=309;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:35:42:1.4:103.7,0,1.4:35:0:-109.7:109.7\n2\t166689462\t125038:1\tA\tA[2:166690576[\t82\tPASS\tDISC_MAPQ=46;EVDNC=DSCRD;IMPRECISE;MAPQ=46;MATEID=125038:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=2:166689462(+)-2:166690576(-)__2_166673501_166698501D;SPAN=1114;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:27:16:7.5:82.5,7.5,0:0:27:-82.52:82.52\n2\t166690576\t125038:2\tT\t]2:166689462]T\t82\tPASS\tDISC_MAPQ=37;EVDNC=DSCRD;IMPRECISE;MAPQ=37;MATEID=125038:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=2:166689462(+)-2:166690576(-)__2_166673501_166698501D;SPAN=1114;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:27:16:7.5:82.5,7.5,0:0:27:-82.52:82.52\n2\t166690583\t125028:2\tA\t[2:154150374[A\t99\tPASS\tDISC_MAPQ=42;EVDNC=ASDIS;INSERTION=A;MAPQ=60;MATEID=125028:1;MATENM=0;NM=10;NUMPARTS=2;SCTG=c_2_166673501_166698501_5C;SPAN=12540209;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:69:21:19.2:211.2,19.2,0:64:17:-211.3:211.3\n2\t168039311\t125455:1\tG\tG[2:168039617[\t99\tPASS\tEVDNC=ASSMB;HOMSEQ=AAAAAAGCAGATCAG;MAPQ=60;MATEID=125455:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_168021001_168046001_91C;SPAN=306;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:38:39:10.8:118.8,10.8,0:38:0:-118.8:118.8\n2\t168039617\t125455:2\tA\t]2:168039311]A\t99\tPASS\tEVDNC=ASSMB;HOMSEQ=AAAAAAGCAGATCAG;MAPQ=60;MATEID=125455:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_168021001_168046001_91C;SPAN=306;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:38:39:10.8:118.8,10.8,0:38:0:-118.8:118.8\n2\t169004595\t135835:1\tC\tC[2:194709245[\t27\tPASS\tEVDNC=ASSMB;HOMSEQ=C;MAPQ=60;MATEID=135835:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_194701501_194726501_15C;SPAN=25704650;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:30:27.8:27.8,0,47.6:11:0:-27.88:28.16\n2\t169248623\t125952:1\tA\tA[2:169254653[\t52\tPASS\tEVDNC=ASSMB;HOMSEQ=AAAAAACAGCAATGTTGA;MAPQ=60;MATEID=125952:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_169246001_169271001_139C;SPAN=6030;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:19:37:39.2:52.4,0,39.2:19:0:-52.39:52.39\n2\t169254653\t125952:2\tA\t]2:169248623]A\t52\tPASS\tEVDNC=ASSMB;HOMSEQ=AAAAAACAGCAATGTTGA;MAPQ=60;MATEID=125952:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_169246001_169271001_139C;SPAN=6030;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:19:37:39.2:52.4,0,39.2:19:0:-52.39:52.39\n2\t169785008\t126220:1\tC\tC[2:169787442[\t82\tPASS\tEVDNC=ASSMB;HOMSEQ=TCATTATTTTC;MAPQ=60;MATEID=126220:2;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_2_169785001_169810001_42C;SPAN=2434;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:27:25:7.5:82.5,7.5,0:27:0:-82.52:82.52\n2\t169787442\t126220:2\tT\t]2:169785008]T\t82\tPASS\tEVDNC=ASSMB;HOMSEQ=TCATTATTTTC;MAPQ=60;MATEID=126220:1;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_2_169785001_169810001_42C;SPAN=2434;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:27:25:7.5:82.5,7.5,0:27:0:-82.52:82.52\n2\t171438928\t126956:1\tC\tC[12:104125233[\t99\tPASS\tDISC_MAPQ=60;EVDNC=TSI_L;HOMSEQ=TCAGTC;MAPQ=60;MATEID=126956:2;MATENM=0;NM=2;NUMPARTS=3;SCTG=c_2_171426501_171451501_8C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:47:30:12.9:141.9,12.9,0:46:9:-141.9:141.9\n2\t171976067\t127221:1\tA\t[Un_JTFH01001495v1_decoy:1[A\t99\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=127221:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_2_171965501_171990501_6C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:45:27:12.6:138.6,12.6,0:45:0:-138.6:138.6\n2\t171976069\t987138:1\tC\tC[Un_KN707623v1_decoy:1[\t75\tPASS\tDISC_MAPQ=255;EVDNC=TSI_L;MAPQ=60;MATEID=987138:2;MATENM=2;NM=0;NUMPARTS=7;REPSEQ=CGACGA;SCTG=c_474_1_3784_1C;SPAN=-1;SUBN=1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:32:10:8.6:75.4,8.6,0:32:0:-75.43:75.43\n2\t172041326\t127279:1\tG\tG[2:172045508[\t59\tPASS\tDISC_MAPQ=52;EVDNC=ASDIS;HOMSEQ=AAAATTAGCCGGGCGTGGTGG;MAPQ=60;MATEID=127279:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_2_172039001_172064001_63C;SPAN=4182;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:20:13:5.4:59.4,5.4,0:12:11:-59.41:59.41\n2\t172045508\t127279:2\tA\t]2:172041326]A\t59\tPASS\tDISC_MAPQ=49;EVDNC=ASDIS;HOMSEQ=AAAATTAGCCGGGCGTGGTGG;MAPQ=60;MATEID=127279:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_2_172039001_172064001_63C;SPAN=4182;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:20:13:5.4:59.4,5.4,0:12:11:-59.41:59.41\n2\t172139606\t127333:1\tT\tT[2:172142746[\t21\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=127333:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=2:172139606(+)-2:172142746(-)__2_172137001_172162001D;SPAN=3140;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:29:21.5:21.5,0,51.2:0:9:-21.56:22.23\n2\t172142746\t127333:2\tA\t]2:172139606]A\t21\tPASS\tDISC_MAPQ=45;EVDNC=DSCRD;IMPRECISE;MAPQ=45;MATEID=127333:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=2:172139606(+)-2:172142746(-)__2_172137001_172162001D;SPAN=3140;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:29:21.5:21.5,0,51.2:0:9:-21.56:22.23\n2\t173287016\t127742:1\tT\tT[2:173287318[\t51\tPASS\tEVDNC=ASSMB;HOMSEQ=CTCTTTAACTTTTT;MAPQ=60;MATEID=127742:2;MATENM=8;NM=0;NUMPARTS=2;SCTG=c_2_173264001_173289001_76C;SPAN=302;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:18:28:18.5:51.5,0,18.5:18:0:-52.37:52.37\n2\t173287318\t127742:2\tC\t]2:173287016]C\t51\tPASS\tEVDNC=ASSMB;HOMSEQ=CTCTTTAACTTTTT;MAPQ=60;MATEID=127742:1;MATENM=0;NM=8;NUMPARTS=2;SCTG=c_2_173264001_173289001_76C;SPAN=302;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:18:28:18.5:51.5,0,18.5:18:0:-52.37:52.37\n2\t176400917\t128762:1\tT\tT[2:176407313[\t99\tPASS\tEVDNC=ASSMB;HOMSEQ=TATT;MAPQ=60;MATEID=128762:2;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_2_176400001_176425001_18C;SPAN=6396;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:35:22:9.6:105.6,9.6,0:35:0:-105.6:105.6\n2\t176407313\t128762:2\tT\t]2:176400917]T\t99\tPASS\tEVDNC=ASSMB;HOMSEQ=TATT;MAPQ=60;MATEID=128762:1;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_2_176400001_176425001_18C;SPAN=6396;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:35:22:9.6:105.6,9.6,0:35:0:-105.6:105.6\n2\t177252359\t129060:1\tA\tA[2:177259301[\t27\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=129060:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=2:177252359(+)-2:177259301(-)__2_177257501_177282501D;SPAN=6942;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:19:17.9:27.8,0,17.9:0:10:-27.73:27.73\n2\t177259301\t129060:2\tC\t]2:177252359]C\t27\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=129060:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=2:177252359(+)-2:177259301(-)__2_177257501_177282501D;SPAN=6942;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:19:17.9:27.8,0,17.9:0:10:-27.73:27.73\n2\t177422909\t129133:1\tC\tC[2:177423334[\t99\tPASS\tEVDNC=ASSMB;INSERTION=AGCCAAACAG;MAPQ=60;MATEID=129133:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_177404501_177429501_28C;SPAN=425;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:34:38:7.2:108.9,7.2,0:34:0:-109.6:109.6\n2\t177423334\t129133:2\tT\t]2:177422909]T\t99\tPASS\tEVDNC=ASSMB;INSERTION=AGCCAAACAG;MAPQ=60;MATEID=129133:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_177404501_177429501_28C;SPAN=425;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:34:38:7.2:108.9,7.2,0:34:0:-109.6:109.6\n2\t178826569\t129781:1\tT\t]2:178874593]T\t29\tPASS\tEVDNC=ASSMB;INSERTION=AGTTGTTTCCAACTGCTTTGCAG;MAPQ=60;MATEID=129781:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_178874501_178899501_47C;SPAN=48024;SUBN=2;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:25:29.3:29.3,0,32.6:11:0:-29.28:29.3\n2\t178838895\t129763:1\tA\tA[2:178839864[\t92\tPASS\tEVDNC=ASSMB;INSERTION=TGAAAGTA;MAPQ=60;MATEID=129763:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_178825501_178850501_1C;SPAN=969;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:31:37:0.3:92.4,0.3,0:31:0:-97.36:97.36\n2\t178839864\t129763:2\tC\t]2:178838895]C\t92\tPASS\tEVDNC=ASSMB;INSERTION=TGAAAGTA;MAPQ=60;MATEID=129763:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_178825501_178850501_1C;SPAN=969;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:31:37:0.3:92.4,0.3,0:31:0:-97.36:97.36\n2\t178874593\t129781:2\tC\tC[2:178826569[\t29\tPASS\tEVDNC=ASSMB;INSERTION=AGTTGTTTCCAACTGCTTTGCAG;MAPQ=60;MATEID=129781:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_178874501_178899501_47C;SPAN=48024;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:25:29.3:29.3,0,32.6:11:0:-29.28:29.3\n2\t181061110\t130693:1\tT\tT[2:181061423[\t85\tPASS\tEVDNC=ASSMB;HOMSEQ=GACCACTTCT;MAPQ=60;MATEID=130693:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_181055001_181080001_61C;SPAN=313;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:28:25:7.8:85.8,7.8,0:28:0:-85.82:85.82\n2\t181061423\t130693:2\tG\t]2:181061110]G\t85\tPASS\tEVDNC=ASSMB;HOMSEQ=GACCACTTCT;MAPQ=60;MATEID=130693:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_181055001_181080001_61C;SPAN=313;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:28:25:7.8:85.8,7.8,0:28:0:-85.82:85.82\n2\t182289080\t131078:1\tC\t]2:182289280]C\t26\tPASS\tEVDNC=ASSMB;HOMSEQ=CT;MAPQ=60;MATEID=131078:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_182280001_182305001_6C;SPAN=200;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:58:26.6:26.6,0,119:13:0:-26.61:29.96\n2\t182289280\t131078:2\tT\tT[2:182289080[\t26\tPASS\tEVDNC=ASSMB;HOMSEQ=CT;MAPQ=60;MATEID=131078:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_182280001_182305001_6C;SPAN=200;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:58:26.6:26.6,0,119:13:0:-26.61:29.96\n2\t183929705\t131661:1\tA\tA[2:183939304[\t99\tPASS\tEVDNC=ASSMB;HOMSEQ=GA;MAPQ=60;MATEID=131661:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_183921501_183946501_80C;SPAN=9599;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:32:37:3.6:99,3.6,0:32:0:-101.7:101.7\n2\t183939304\t131661:2\tG\t]2:183929705]G\t99\tPASS\tEVDNC=ASSMB;HOMSEQ=GA;MAPQ=60;MATEID=131661:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_183921501_183946501_80C;SPAN=9599;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:32:37:3.6:99,3.6,0:32:0:-101.7:101.7\n2\t186472273\t132612:1\tT\tT[2:186473340[\t31\tPASS\tEVDNC=ASSMB;INSERTION=CCCCATGGTCTCCCTCTCCCTCTTTCCATGGTCTCCC;MAPQ=60;MATEID=132612:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_186469501_186494501_55C;SPAN=1067;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:29:31.4:31.4,0,41.3:12:0:-31.46:31.54\n2\t186473340\t132612:2\tG\t]2:186472273]G\t31\tPASS\tEVDNC=ASSMB;INSERTION=CCCCATGGTCTCCCTCTCCCTCTTTCCATGGTCTCCC;MAPQ=60;MATEID=132612:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_186469501_186494501_55C;SPAN=1067;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:29:31.4:31.4,0,41.3:12:0:-31.46:31.54\n2\t187785173\t133134:1\tG\t]2:194591082]G\t92\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=GGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGC;MAPQ=60;MATEID=133134:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_187768001_187793001_76C;SPAN=6805909;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:31:20:8.4:92.4,8.4,0:26:6:-92.42:92.42\n2\t189753180\t133859:1\tC\tC[2:189765979[\t85\tPASS\tEVDNC=ASSMB;HOMSEQ=AC;MAPQ=60;MATEID=133859:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_2_189752501_189777501_15C;SPAN=12799;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:29:37:6.2:85.4,0,6.2:29:0:-89.11:89.11\n2\t189765979\t133859:2\tA\t]2:189753180]A\t85\tPASS\tEVDNC=ASSMB;HOMSEQ=AC;MAPQ=39;MATEID=133859:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_2_189752501_189777501_15C;SPAN=12799;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:29:37:6.2:85.4,0,6.2:29:0:-89.11:89.11\n2\t191154732\t134413:1\tC\t]2:191154907]C\t41\tPASS\tEVDNC=ASSMB;HOMSEQ=CAGTT;MAPQ=60;MATEID=134413:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_191149001_191174001_96C;SPAN=175;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:19:76:41.6:41.6,0,147.2:19:0:-41.36:44.82\n2\t191154907\t134413:2\tT\tT[2:191154732[\t41\tPASS\tEVDNC=ASSMB;HOMSEQ=CAGTT;MAPQ=60;MATEID=134413:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_191149001_191174001_96C;SPAN=175;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:19:76:41.6:41.6,0,147.2:19:0:-41.36:44.82\n2\t191834730\t134685:1\tT\t]2:191863633]T\t75\tPASS\tEVDNC=ASSMB;INSERTION=TAAT;MAPQ=60;MATEID=134685:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_191859501_191884501_27C;SPAN=28903;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:26:36:13.1:75.8,0,13.1:26:0:-78.01:78.01\n2\t191863633\t134685:2\tT\tT[2:191834730[\t75\tPASS\tEVDNC=ASSMB;INSERTION=TAAT;MAPQ=60;MATEID=134685:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_191859501_191884501_27C;SPAN=28903;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:26:36:13.1:75.8,0,13.1:26:0:-78.01:78.01\n2\t193213246\t135182:1\tC\t[11:25101793[C\t85\tPASS\tDISC_MAPQ=3;EVDNC=ASDIS;MAPQ=11;MATEID=135182:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_2_193207001_193232001_9C;SPAN=-1;SUBN=10;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:28:27:7.8:85.8,7.8,0:25:7:-85.82:85.82\n2\t193680440\t702567:1\tT\tT[14:64980572[\t44\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=702567:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=2:193680440(+)-14:64980572(-)__14_64974001_64999001D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:16:31:31.1:44.3,0,31.1:0:16:-44.17:44.17\n2\t193824778\t135427:1\tG\tG[2:193834042[\t99\tPASS\tEVDNC=ASSMB;HOMSEQ=G;MAPQ=60;MATEID=135427:2;MATENM=2;NM=3;NUMPARTS=2;SCTG=c_2_193819501_193844501_3C;SPAN=9264;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:47:21:12.9:141.9,12.9,0:47:0:-141.9:141.9\n2\t193834042\t135427:2\tG\t]2:193824778]G\t99\tPASS\tEVDNC=ASSMB;HOMSEQ=G;MAPQ=60;MATEID=135427:1;MATENM=3;NM=2;NUMPARTS=2;SCTG=c_2_193819501_193844501_3C;SPAN=9264;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:47:21:12.9:141.9,12.9,0:47:0:-141.9:141.9\n2\t194591082\t133134:2\tC\tC[2:187785173[\t92\tPASS\tDISC_MAPQ=4;EVDNC=ASDIS;HOMSEQ=GGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGC;MAPQ=60;MATEID=133134:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_187768001_187793001_76C;SPAN=6805909;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:31:20:8.4:92.4,8.4,0:26:6:-92.42:92.42\n2\t194709245\t135835:2\tC\t]2:169004595]C\t27\tPASS\tEVDNC=ASSMB;HOMSEQ=C;MAPQ=60;MATEID=135835:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_194701501_194726501_15C;SPAN=25704650;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:30:27.8:27.8,0,47.6:11:0:-27.88:28.16\n2\t195871703\t136348:1\tA\tA[2:195871967[\t42\tPASS\tEVDNC=ASSMB;HOMSEQ=AAACTACTTAAGGGAA;MAPQ=60;MATEID=136348:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_2_195853001_195878001_3C;SPAN=264;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:16:36:42.8:42.8,0,46.1:16:0:-42.7:42.71\n2\t195871967\t136348:2\tA\t]2:195871703]A\t42\tPASS\tEVDNC=ASSMB;HOMSEQ=AAACTACTTAAGGGAA;MAPQ=60;MATEID=136348:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_2_195853001_195878001_3C;SPAN=264;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:16:36:42.8:42.8,0,46.1:16:0:-42.7:42.71\n2\t198602574\t13050:2\tT\tT]1:53954555]\t16\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AAT;MAPQ=60;MATEID=13050:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_53949001_53974001_99C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:94:16.7:16.7,0,218:11:5:-16.49:26.94\n2\t200330213\t137704:1\tC\tC[2:200330215[\t99\tPASS\tEVDNC=ASSMB;INSERTION=TGTTATTGTTAATCAGTATTGGTATTTGAATAGGGATATCCAAAGTATTTGCTGAACAGAAAGCATGTTGTTTTAGGTCCATATTTTCCCTGAAAGTATTTTTATTATTATCATTTTTAAAATTTTTCCCTCCAATGGTCTTATTTAAATTAATTTACTTAACAAGCCGTATATTCCTTGTGG;MAPQ=60;MATEID=137704:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_2_200312001_200337001_67C;SPAN=2;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:54:46:15:165,15,0:54:0:-165:165\n2\t200330215\t137704:2\tA\t]2:200330213]A\t99\tPASS\tEVDNC=ASSMB;INSERTION=TGTTATTGTTAATCAGTATTGGTATTTGAATAGGGATATCCAAAGTATTTGCTGAACAGAAAGCATGTTGTTTTAGGTCCATATTTTCCCTGAAAGTATTTTTATTATTATCATTTTTAAAATTTTTCCCTCCAATGGTCTTATTTAAATTAATTTACTTAACAAGCCGTATATTCCTTGTGG;MAPQ=60;MATEID=137704:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_2_200312001_200337001_67C;SPAN=2;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:54:46:15:165,15,0:54:0:-165:165\n2\t200892641\t137952:1\tT\t]2:200999744]T\t69\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=T;MAPQ=60;MATEID=137952:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_200998001_201023001_37C;SPAN=107103;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:23:14:6.3:69.3,6.3,0:19:16:-69.32:69.32\n2\t200999744\t137952:2\tT\tT[2:200892641[\t69\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=T;MAPQ=60;MATEID=137952:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_200998001_201023001_37C;SPAN=107103;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:23:14:6.3:69.3,6.3,0:19:16:-69.32:69.32\n2\t201224090\t138022:1\tG\tG]2:201224836]\t32\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=138022:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=2:201224090(+)-2:201224836(+)__2_201218501_201243501D;SPAN=746;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:25:29.3:32.6,0,29.3:0:12:-32.59:32.59\n2\t201224836\t138022:2\tG\tG]2:201224090]\t32\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=138022:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=2:201224090(+)-2:201224836(+)__2_201218501_201243501D;SPAN=746;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:25:29.3:32.6,0,29.3:0:12:-32.59:32.59\n2\t204726519\t138791:1\tA\tA[2:204836612[\t33\tPASS\tEVDNC=ASSMB;INSERTION=TCACCTT;MAPQ=60;MATEID=138791:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_204820001_204845001_17C;SPAN=110093;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:11:7:3:33,3,0:11:0:-33.01:33.01\n2\t204836612\t138791:2\tG\t]2:204726519]G\t33\tPASS\tEVDNC=ASSMB;INSERTION=TCACCTT;MAPQ=60;MATEID=138791:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_204820001_204845001_17C;SPAN=110093;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:11:7:3:33,3,0:11:0:-33.01:33.01\n2\t207609829\t139331:1\tG\tG[2:207612088[\t29\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=139331:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=2:207609829(+)-2:207612088(-)__2_207588501_207613501D;SPAN=2259;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:10:12:0:29.7,0,0:0:10:-31.35:31.35\n2\t207612088\t139331:2\tT\t]2:207609829]T\t29\tPASS\tDISC_MAPQ=49;EVDNC=DSCRD;IMPRECISE;MAPQ=49;MATEID=139331:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=2:207609829(+)-2:207612088(-)__2_207588501_207613501D;SPAN=2259;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:10:12:0:29.7,0,0:0:10:-31.35:31.35\n2\t208098598\t139470:1\tT\t]Un_KN707702v1_decoy:6466]T\t82\tPASS\tDISC_MAPQ=255;EVDNC=TSI_G;HOMSEQ=AAAATTTTTTGGGTACATAGTAGGTATATATATTTAA;INSERTION=A;MAPQ=60;MATEID=139470:2;MATENM=1;NM=1;NUMPARTS=3;SCTG=c_2_208078501_208103501_28C;SPAN=-1;SUBN=5;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:27:19:7.5:82.5,7.5,0:27:0:-82.52:82.52\n2\t208587006\t139691:1\tT\tT[2:208587320[\t10\tPASS\tEVDNC=ASSMB;HOMSEQ=GTTTGTTGATTTTT;MAPQ=60;MATEID=139691:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_208568501_208593501_24C;SPAN=314;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:5:22:10.4:10.4,0,43.4:5:0:-10.32:11.56\n2\t208587320\t139691:2\tG\t]2:208587006]G\t10\tPASS\tEVDNC=ASSMB;HOMSEQ=GTTTGTTGATTTTT;MAPQ=60;MATEID=139691:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_208568501_208593501_24C;SPAN=314;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:5:22:10.4:10.4,0,43.4:5:0:-10.32:11.56\n2\t212191435\t140743:1\tA\t]2:212191551]A\t53\tPASS\tEVDNC=ASSMB;INSERTION=ACATGTTATACCTGTTATATATA;MAPQ=60;MATEID=140743:2;MATENM=2;NM=1;NUMPARTS=2;SCTG=c_2_212170001_212195001_87C;SPAN=116;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:20:44:53.6:53.6,0,56.9:20:0:-53.65:53.66\n2\t212191551\t140743:2\tT\tT[2:212191435[\t53\tPASS\tEVDNC=ASSMB;INSERTION=ACATGTTATACCTGTTATATATA;MAPQ=60;MATEID=140743:1;MATENM=1;NM=2;NUMPARTS=2;SCTG=c_2_212170001_212195001_87C;SPAN=116;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:20:44:53.6:53.6,0,56.9:20:0:-53.65:53.66\n2\t212709962\t140980:1\tC\tC[2:212710254[\t69\tPASS\tEVDNC=ASSMB;HOMSEQ=AAAATAGCAAGGCCC;MAPQ=60;MATEID=140980:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_212709001_212734001_32C;SPAN=292;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:23:21:6.3:69.3,6.3,0:23:0:-69.32:69.32\n2\t212710254\t140980:2\tA\t]2:212709962]A\t69\tPASS\tEVDNC=ASSMB;HOMSEQ=AAAATAGCAAGGCCC;MAPQ=60;MATEID=140980:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_212709001_212734001_32C;SPAN=292;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:23:21:6.3:69.3,6.3,0:23:0:-69.32:69.32\n2\t213306364\t141169:1\tT\tT[Un_KN707739v1_decoy:1[\t75\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=141169:2;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_2_213297001_213322001_17C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:25:11:6.9:75.9,6.9,0:25:0:-75.92:75.92\n2\t213642624\t141246:1\tA\tA[2:213642846[\t9\tPASS\tEVDNC=ASSMB;HOMSEQ=AAAAGAGAGACTGGTCTA;MAPQ=60;MATEID=141246:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_213640001_213665001_27C;SPAN=222;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:4:13:9.5:9.5,0,22.7:4:0:-9.55:9.863\n2\t213642846\t141246:2\tA\t]2:213642624]A\t9\tPASS\tEVDNC=ASSMB;HOMSEQ=AAAAGAGAGACTGGTCTA;MAPQ=60;MATEID=141246:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_213640001_213665001_27C;SPAN=222;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:4:13:9.5:9.5,0,22.7:4:0:-9.55:9.863\n2\t214647889\t141837:1\tA\t]2:215113891]A\t38\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=ATT;MAPQ=60;MATEID=141837:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_2_215110001_215135001_11C;SPAN=466002;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:18:5:38,0,5:10:7:-39.01:39.01\n2\t215113891\t141837:2\tT\tT[2:214647889[\t38\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=ATT;MAPQ=60;MATEID=141837:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_2_215110001_215135001_11C;SPAN=466002;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:18:5:38,0,5:10:7:-39.01:39.01\n2\t215919785\t142169:1\tG\t]2:215919902]G\t30\tPASS\tEVDNC=ASSMB;INSERTION=TCTTTCCTGCAAGGGCA;MAPQ=60;MATEID=142169:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_215918501_215943501_67C;SPAN=117;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:55:30.8:30.8,0,106.7:14:0:-30.75:33.15\n2\t215919902\t142169:2\tT\tT[2:215919785[\t30\tPASS\tEVDNC=ASSMB;INSERTION=TCTTTCCTGCAAGGGCA;MAPQ=60;MATEID=142169:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_215918501_215943501_67C;SPAN=117;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:55:30.8:30.8,0,106.7:14:0:-30.75:33.15\n2\t216225272\t142263:1\tT\tT[2:216227775[\t66\tPASS\tDISC_MAPQ=55;EVDNC=DSCRD;IMPRECISE;MAPQ=55;MATEID=142263:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=2:216225272(+)-2:216227775(-)__2_216212501_216237501D;SPAN=2503;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:22:10:6:66,6,0:0:22:-66.02:66.02\n2\t216227775\t142263:2\tC\t]2:216225272]C\t66\tPASS\tDISC_MAPQ=59;EVDNC=DSCRD;IMPRECISE;MAPQ=59;MATEID=142263:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=2:216225272(+)-2:216227775(-)__2_216212501_216237501D;SPAN=2503;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:22:10:6:66,6,0:0:22:-66.02:66.02\n2\t216228074\t142267:1\tT\tT[2:216228389[\t69\tPASS\tEVDNC=ASSMB;HOMSEQ=TCTTTCTTTCTTTCT;MAPQ=60;MATEID=142267:2;MATENM=3;NM=0;NUMPARTS=2;SCTG=c_2_216212501_216237501_20C;SPAN=315;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:23:18:6.3:69.3,6.3,0:23:0:-69.32:69.32\n2\t216228389\t142267:2\tT\t]2:216228074]T\t69\tPASS\tEVDNC=ASSMB;HOMSEQ=TCTTTCTTTCTTTCT;MAPQ=60;MATEID=142267:1;MATENM=0;NM=3;NUMPARTS=2;SCTG=c_2_216212501_216237501_20C;SPAN=315;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:23:18:6.3:69.3,6.3,0:23:0:-69.32:69.32\n2\t217091173\t142474:1\tG\tG[2:217092544[\t69\tPASS\tEVDNC=ASSMB;HOMSEQ=GGTGG;MAPQ=60;MATEID=142474:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_217070001_217095001_2C;SPAN=1371;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:23:21:6.3:69.3,6.3,0:23:0:-69.32:69.32\n2\t217092544\t142474:2\tG\t]2:217091173]G\t69\tPASS\tEVDNC=ASSMB;HOMSEQ=GGTGG;MAPQ=60;MATEID=142474:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_217070001_217095001_2C;SPAN=1371;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:23:21:6.3:69.3,6.3,0:23:0:-69.32:69.32\n2\t219367977\t143177:1\tC\tC[2:219368443[\t89\tPASS\tDISC_MAPQ=56;EVDNC=ASDIS;HOMSEQ=CCAAGATCACACCATTGCACTCCAGCCTGGGTGACAGAGC;MAPQ=60;MATEID=143177:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_2_219348501_219373501_5C;SPAN=466;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:29:23:8.1:89.1,8.1,0:19:16:-89.12:89.12\n2\t219368443\t143177:2\tC\t]2:219367977]C\t89\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=CCAAGATCACACCATTGCACTCCAGCCTGGGTGACAGAGC;MAPQ=60;MATEID=143177:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_2_219348501_219373501_5C;SPAN=466;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:29:23:8.1:89.1,8.1,0:19:16:-89.12:89.12\n2\t220481216\t143576:1\tC\tC[2:220481540[\t35\tPASS\tEVDNC=ASSMB;HOMSEQ=TTTTC;MAPQ=60;MATEID=143576:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_2_220475501_220500501_164C;SPAN=324;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:17:5.3:35,0,5.3:12:0:-35.78:35.78\n2\t220481540\t143576:2\tT\t]2:220481216]T\t35\tPASS\tEVDNC=ASSMB;HOMSEQ=TTTTC;MAPQ=60;MATEID=143576:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_2_220475501_220500501_164C;SPAN=324;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:17:5.3:35,0,5.3:12:0:-35.78:35.78\n2\t230460594\t146493:1\tT\tT[2:230460923[\t34\tPASS\tEVDNC=ASSMB;HOMSEQ=GGTAATCTGTTTCTT;MAPQ=60;MATEID=146493:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_2_230447001_230472001_45C;SPAN=329;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:29:34.7:34.7,0,38:13:0:-34.76:34.77\n2\t230460923\t146493:2\tG\t]2:230460594]G\t34\tPASS\tEVDNC=ASSMB;HOMSEQ=GGTAATCTGTTTCTT;MAPQ=60;MATEID=146493:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_2_230447001_230472001_45C;SPAN=329;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:29:34.7:34.7,0,38:13:0:-34.76:34.77\n2\t232514141\t146962:1\tC\tC[2:232515638[\t25\tPASS\tEVDNC=ASSMB;HOMSEQ=C;MAPQ=60;MATEID=146962:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_232505001_232530001_66C;SPAN=1497;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:15:12.2:25.4,0,12.2:9:0:-25.74:25.74\n2\t232515638\t146962:2\tC\t]2:232514141]C\t25\tPASS\tEVDNC=ASSMB;HOMSEQ=C;MAPQ=60;MATEID=146962:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_232505001_232530001_66C;SPAN=1497;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:15:12.2:25.4,0,12.2:9:0:-25.74:25.74\n2\t237405139\t148427:1\tT\t]2:237625329]T\t99\tPASS\tEVDNC=ASSMB;HOMSEQ=TC;MAPQ=60;MATEID=148427:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_237601001_237626001_14C;SPAN=220190;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:34:15:9.3:102.3,9.3,0:34:0:-102.3:102.3\n2\t237517179\t148353:1\tG\t]2:237517715]G\t43\tPASS\tDISC_MAPQ=58;EVDNC=DSCRD;IMPRECISE;MAPQ=58;MATEID=148353:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=2:237517179(-)-2:237517715(+)__2_237503001_237528001D;SPAN=536;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:19:69:43.4:43.4,0,129.2:0:19:-43.32:45.76\n2\t237517715\t148353:2\tG\tG[2:237517179[\t43\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=148353:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=2:237517179(-)-2:237517715(+)__2_237503001_237528001D;SPAN=536;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:19:69:43.4:43.4,0,129.2:0:19:-43.32:45.76\n2\t237561091\t148404:1\tT\t]17:497801]T\t21\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TT;MAPQ=60;MATEID=148404:2;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_2_237552001_237577001_84C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:41:21.5:21.5,0,80.9:7:6:-21.49:23.47\n2\t237623393\t716693:1\tC\tC[14:104206456[\t33\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=716693:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_14_104198501_104223501_154C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:22:20.3:33.5,0,20.3:12:0:-33.55:33.55\n2\t237625329\t148427:2\tC\tC[2:237405139[\t99\tPASS\tEVDNC=ASSMB;HOMSEQ=TC;MAPQ=60;MATEID=148427:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_2_237601001_237626001_14C;SPAN=220190;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:34:15:9.3:102.3,9.3,0:34:0:-102.3:102.3\n2\t238591867\t148627:1\tC\tC[2:238593091[\t23\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=148627:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=2:238591867(+)-2:238593091(-)__2_238581001_238606001D;SPAN=1224;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:11:3.5:23.3,0,3.5:0:8:-24.05:24.05\n2\t238593091\t148627:2\tA\t]2:238591867]A\t23\tPASS\tDISC_MAPQ=57;EVDNC=DSCRD;IMPRECISE;MAPQ=57;MATEID=148627:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=2:238591867(+)-2:238593091(-)__2_238581001_238606001D;SPAN=1224;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:11:3.5:23.3,0,3.5:0:8:-24.05:24.05\n2\t240614048\t918199:1\tC\t]22:34476818]C\t25\tPASS\tEVDNC=ASSMB;HOMSEQ=CT;MAPQ=60;MATEID=918199:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_22_34471501_34496501_39C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:17:15.2:25.1,0,15.2:9:0:-24.99:24.99\n3\t503842\t149668:1\tT\tT[3:504455[\t26\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;INSERTION=CC;MAPQ=60;MATEID=149668:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_490001_515001_9C;SPAN=613;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:37:26:26,0,65.6:5:9:-25.91:26.93\n3\t504455\t149668:2\tT\t]3:503842]T\t26\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;INSERTION=CC;MAPQ=60;MATEID=149668:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_490001_515001_9C;SPAN=613;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:37:26:26,0,65.6:5:9:-25.91:26.93\n3\t927890\t149808:1\tG\t]3:953617]G\t24\tPASS\tEVDNC=ASSMB;INSERTION=AGCCACG;MAPQ=60;MATEID=149808:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_931001_956001_12C;SPAN=25727;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:31:24.5:24.5,0,50.9:10:0:-24.3:24.91\n3\t953617\t149808:2\tA\tA[3:927890[\t24\tPASS\tEVDNC=ASSMB;INSERTION=AGCCACG;MAPQ=60;MATEID=149808:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_931001_956001_12C;SPAN=25727;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:31:24.5:24.5,0,50.9:10:0:-24.3:24.91\n3\t1263028\t149945:1\tT\tT[3:1264837[\t15\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TGT;MAPQ=60;MATEID=149945:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_1249501_1274501_18C;SPAN=1809;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:38:15.8:15.8,0,78.5:6:2:-15.73:18.19\n3\t1264837\t149945:2\tT\t]3:1263028]T\t15\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TGT;MAPQ=60;MATEID=149945:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_1249501_1274501_18C;SPAN=1809;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:38:15.8:15.8,0,78.5:6:2:-15.73:18.19\n3\t1279142\t149948:1\tG\tG[3:1279700[\t20\tPASS\tEVDNC=ASSMB;HOMSEQ=G;MAPQ=60;MATEID=149948:2;MATENM=0;NM=3;NUMPARTS=2;SCTG=c_3_1274001_1299001_10C;SPAN=558;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:70:20:20,0,155.3:12:0:-19.94:26.09\n3\t1279700\t149948:2\tG\t]3:1279142]G\t20\tPASS\tEVDNC=ASSMB;HOMSEQ=G;MAPQ=60;MATEID=149948:1;MATENM=3;NM=0;NUMPARTS=2;SCTG=c_3_1274001_1299001_10C;SPAN=558;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:70:20:20,0,155.3:12:0:-19.94:26.09\n3\t1927848\t150204:1\tC\tC[3:1930087[\t26\tPASS\tEVDNC=ASSMB;HOMSEQ=C;MAPQ=60;MATEID=150204:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_3_1911001_1936001_6C;SPAN=2239;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:45:26.9:26.9,0,86.3:12:0:-26.96:28.7\n3\t1930087\t150204:2\tC\t]3:1927848]C\t26\tPASS\tEVDNC=ASSMB;HOMSEQ=C;MAPQ=60;MATEID=150204:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_3_1911001_1936001_6C;SPAN=2239;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:45:26.9:26.9,0,86.3:12:0:-26.96:28.7\n3\t2224305\t150313:1\tT\t]3:2238399]T\t47\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TCC;MAPQ=60;MATEID=150313:2;MATENM=2;NM=2;NUMPARTS=2;SCTG=c_3_2229501_2254501_6C;SPAN=14094;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:17:33:33.8:47,0,33.8:10:10:-46.91:46.91\n3\t2238399\t150313:2\tC\tC[3:2224305[\t47\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TCC;MAPQ=60;MATEID=150313:1;MATENM=2;NM=2;NUMPARTS=2;SCTG=c_3_2229501_2254501_6C;SPAN=14094;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:17:33:33.8:47,0,33.8:10:10:-46.91:46.91\n3\t2523747\t150456:1\tC\tC[3:2567702[\t31\tPASS\tEVDNC=ASSMB;INSERTION=AATTCCCATTTCTCCTCAA;MAPQ=60;MATEID=150456:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_2548001_2573001_7C;SPAN=43955;SUBN=1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:19:14.6:31.1,0,14.6:11:0:-31.19:31.19\n3\t2567702\t150456:2\tT\t]3:2523747]T\t31\tPASS\tEVDNC=ASSMB;INSERTION=AATTCCCATTTCTCCTCAA;MAPQ=60;MATEID=150456:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_2548001_2573001_7C;SPAN=43955;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:19:14.6:31.1,0,14.6:11:0:-31.19:31.19\n3\t4025374\t150957:1\tT\tT[3:4027871[\t99\tPASS\tDISC_MAPQ=59;EVDNC=DSCRD;IMPRECISE;MAPQ=59;MATEID=150957:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=3:4025374(+)-3:4027871(-)__3_4018001_4043001D;SPAN=2497;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:55:17:15.3:168.3,15.3,0:0:55:-168.3:168.3\n3\t4027871\t150957:2\tG\t]3:4025374]G\t99\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=150957:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=3:4025374(+)-3:4027871(-)__3_4018001_4043001D;SPAN=2497;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:55:17:15.3:168.3,15.3,0:0:55:-168.3:168.3\n3\t4765626\t151198:1\tA\tA[3:4819268[\t26\tPASS\tEVDNC=ASSMB;HOMSEQ=AGA;MAPQ=60;MATEID=151198:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_4802001_4827001_11C;SPAN=53642;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:25:26:26,0,35.9:10:0:-25.98:26.09\n3\t4819268\t151198:2\tA\t]3:4765626]A\t26\tPASS\tEVDNC=ASSMB;HOMSEQ=AGA;MAPQ=60;MATEID=151198:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_4802001_4827001_11C;SPAN=53642;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:25:26:26,0,35.9:10:0:-25.98:26.09\n3\t6311359\t151854:1\tT\t]3:6311647]T\t99\tPASS\tEVDNC=ASSMB;INSERTION=GAACCTCAGTAAGT;MAPQ=60;MATEID=151854:2;MATENM=2;NM=2;NUMPARTS=2;SCTG=c_3_6296501_6321501_2C;SPAN=288;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:35:53:31.4:100.7,0,31.4:35:0:-102.5:102.5\n3\t6311647\t151854:2\tG\tG[3:6311359[\t99\tPASS\tEVDNC=ASSMB;INSERTION=GAACCTCAGTAAGT;MAPQ=60;MATEID=151854:1;MATENM=2;NM=2;NUMPARTS=2;SCTG=c_3_6296501_6321501_2C;SPAN=288;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:35:53:31.4:100.7,0,31.4:35:0:-102.5:102.5\n3\t6604527\t151993:1\tC\t[3:6612951[C\t81\tPASS\tDISC_MAPQ=60;EVDNC=TSI_L;HOMSEQ=CAATTA;MAPQ=60;MATEID=151993:2;MATENM=0;NM=0;NUMPARTS=3;REPSEQ=AA;SCTG=c_3_6590501_6615501_5C;SPAN=8424;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:28:40:18.5:81.2,0,18.5:21:11:-83.3:83.3\n3\t6604720\t151995:1\tA\tA]3:6608526]\t72\tPASS\tDISC_MAPQ=58;EVDNC=DSCRD;IMPRECISE;MAPQ=58;MATEID=151995:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=3:6604720(+)-3:6608526(+)__3_6590501_6615501D;SPAN=3806;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:23:26:3.9:72.6,3.9,0:0:23:-73.74:73.74\n3\t6608526\t151995:2\tG\tG]3:6604720]\t72\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=151995:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=3:6604720(+)-3:6608526(+)__3_6590501_6615501D;SPAN=3806;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:23:26:3.9:72.6,3.9,0:0:23:-73.74:73.74\n3\t6608570\t151999:1\tT\tT[3:6612945[\t92\tPASS\tDISC_MAPQ=59;EVDNC=DSCRD;IMPRECISE;MAPQ=59;MATEID=151999:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=3:6608570(+)-3:6612945(-)__3_6590501_6615501D;SPAN=4375;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:30:5:8.4:92.4,8.4,0:0:30:-92.42:92.42\n3\t6612945\t151999:2\tA\t]3:6608570]A\t92\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=151999:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=3:6608570(+)-3:6612945(-)__3_6590501_6615501D;SPAN=4375;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:30:5:8.4:92.4,8.4,0:0:30:-92.42:92.42\n3\t6612951\t151993:2\tT\t[3:6604527[T\t81\tPASS\tDISC_MAPQ=60;EVDNC=TSI_L;HOMSEQ=CAATTA;MAPQ=60;MATEID=151993:1;MATENM=0;NM=0;NUMPARTS=3;REPSEQ=AA;SCTG=c_3_6590501_6615501_5C;SPAN=8424;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:28:40:18.5:81.2,0,18.5:21:11:-83.3:83.3\n3\t7404156\t152269:1\tT\t]3:7437597]T\t20\tPASS\tEVDNC=ASSMB;HOMSEQ=TCT;MAPQ=60;MATEID=152269:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_7423501_7448501_25C;SPAN=33441;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:21:20.6:20.6,0,30.5:8:0:-20.51:20.65\n3\t7437597\t152269:2\tT\tT[3:7404156[\t20\tPASS\tEVDNC=ASSMB;HOMSEQ=TCT;MAPQ=60;MATEID=152269:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_7423501_7448501_25C;SPAN=33441;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:21:20.6:20.6,0,30.5:8:0:-20.51:20.65\n3\t7997094\t152479:1\tT\t]3:8055413]T\t19\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=152479:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_3_8036001_8061001_9C;SPAN=58319;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:26:19.1:19.1,0,45.5:8:0:-19.1:19.73\n3\t8055413\t152479:2\tA\tA[3:7997094[\t19\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=152479:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_3_8036001_8061001_9C;SPAN=58319;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:26:19.1:19.1,0,45.5:8:0:-19.1:19.73\n3\t9340576\t152847:1\tC\t]3:9357043]C\t15\tPASS\tEVDNC=ASSMB;INSERTION=GGATTCCATGAGTCAGGCAGAC;MAPQ=60;MATEID=152847:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_3_9334501_9359501_22C;SPAN=16467;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:50:15.8:15.8,0,108.2:9:0:-15.65:19.78\n3\t9357043\t152847:2\tA\tA[3:9340576[\t15\tPASS\tEVDNC=ASSMB;INSERTION=GGATTCCATGAGTCAGGCAGAC;MAPQ=60;MATEID=152847:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_3_9334501_9359501_22C;SPAN=16467;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:50:15.8:15.8,0,108.2:9:0:-15.65:19.78\n3\t10636914\t153237:1\tT\tT]11:78154046]\t37\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;INSERTION=AAA;MAPQ=60;MATEID=153237:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_10633001_10658001_4C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:21:14:37.1,0,14:10:4:-37.47:37.47\n3\t11599603\t518254:1\tC\tC]9:130392964]\t49\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=GAGTGCAGTGGCGCGATCTCGGCTCACTGCAAGCTC;MAPQ=60;MATEID=518254:2;MATENM=4;NM=2;NUMPARTS=2;SCTG=c_9_130389001_130414001_29C;SPAN=-1;SUBN=1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:17:12:4.5:49.5,4.5,0:9:12:-49.51:49.51\n3\t11914405\t153544:1\tT\tT[3:12871893[\t52\tPASS\tDISC_MAPQ=56;EVDNC=DSCRD;IMPRECISE;MAPQ=56;MATEID=153544:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=3:11914405(+)-3:12871893(-)__3_11907001_11932001D;SPAN=957488;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:18:7:4.8:52.8,4.8,0:0:18:-52.81:52.81\n3\t11914580\t153548:1\tA\t]3:12872086]A\t25\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=153548:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=3:11914580(-)-3:12872086(+)__3_11907001_11932001D;SPAN=957506;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:16:12.2:25.4,0,12.2:0:9:-25.35:25.35\n3\t12871893\t153544:2\tT\t]3:11914405]T\t52\tPASS\tDISC_MAPQ=53;EVDNC=DSCRD;IMPRECISE;MAPQ=53;MATEID=153544:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=3:11914405(+)-3:12871893(-)__3_11907001_11932001D;SPAN=957488;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:18:7:4.8:52.8,4.8,0:0:18:-52.81:52.81\n3\t12872086\t153548:2\tA\tA[3:11914580[\t25\tPASS\tDISC_MAPQ=54;EVDNC=DSCRD;IMPRECISE;MAPQ=54;MATEID=153548:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=3:11914580(-)-3:12872086(+)__3_11907001_11932001D;SPAN=957506;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:16:12.2:25.4,0,12.2:0:9:-25.35:25.35\n3\t13639803\t154020:1\tT\tT[3:13640772[\t75\tPASS\tDISC_MAPQ=58;EVDNC=DSCRD;IMPRECISE;MAPQ=58;MATEID=154020:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=3:13639803(+)-3:13640772(-)__3_13622001_13647001D;SPAN=969;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:25:8:6.9:75.9,6.9,0:0:25:-75.92:75.92\n3\t13640772\t154020:2\tA\t]3:13639803]A\t75\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=154020:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=3:13639803(+)-3:13640772(-)__3_13622001_13647001D;SPAN=969;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:25:8:6.9:75.9,6.9,0:0:25:-75.92:75.92\n3\t15230578\t154422:1\tG\t]3:15359990]G\t41\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;MAPQ=60;MATEID=154422:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_15214501_15239501_5C;SPAN=129412;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:15:29:31.4:41.3,0,31.4:10:10:-41.43:41.43\n3\t15359990\t154422:2\tT\tT[3:15230578[\t41\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;MAPQ=60;MATEID=154422:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_15214501_15239501_5C;SPAN=129412;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:15:29:31.4:41.3,0,31.4:10:10:-41.43:41.43\n3\t17060242\t154851:1\tC\t]3:17080219]C\t37\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=154851:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=3:17060242(-)-3:17080219(+)__3_17076501_17101501D;SPAN=19977;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:21:14:37.1,0,14:0:13:-37.47:37.47\n3\t17080219\t154851:2\tG\tG[3:17060242[\t37\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=154851:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=3:17060242(-)-3:17080219(+)__3_17076501_17101501D;SPAN=19977;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:21:14:37.1,0,14:0:13:-37.47:37.47\n3\t20552852\t155688:1\tC\tC[3:20553073[\t2\tPASS\tEVDNC=ASSMB;HOMSEQ=GCCAGGCAGTGGGAGCAGGCACTTC;MAPQ=60;MATEID=155688:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_20531001_20556001_2C;SPAN=221;SUBN=1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:4:39:2.3:2.3,0,94.7:4:0:-2.241:7.735\n3\t20553073\t155688:2\tG\t]3:20552852]G\t2\tPASS\tEVDNC=ASSMB;HOMSEQ=GCCAGGCAGTGGGAGCAGGCACTTC;MAPQ=60;MATEID=155688:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_20531001_20556001_2C;SPAN=221;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:4:39:2.3:2.3,0,94.7:4:0:-2.241:7.735\n3\t21370237\t155889:1\tA\t]3:21373497]A\t17\tPASS\tEVDNC=ASSMB;INSERTION=ATAAATGTTCTCCAATTTCTAC;MAPQ=60;MATEID=155889:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_21364001_21389001_12C;SPAN=3260;SUBN=5;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:45:17:17,0,96.2:9:0:-17.06:20.24\n3\t21373497\t155889:2\tC\tC[3:21370237[\t17\tPASS\tEVDNC=ASSMB;INSERTION=ATAAATGTTCTCCAATTTCTAC;MAPQ=60;MATEID=155889:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_21364001_21389001_12C;SPAN=3260;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:45:17:17,0,96.2:9:0:-17.06:20.24\n3\t21682213\t155995:1\tT\tT[3:21684475[\t99\tPASS\tEVDNC=ASSMB;INSERTION=CTCTCTCTCTCTCTCTCTCTCTCC;MAPQ=60;MATEID=155995:2;MATENM=3;NM=9;NUMPARTS=2;SCTG=c_3_21658001_21683001_0C;SPAN=2262;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:34:6:9.3:102.3,9.3,0:34:0:-102.3:102.3\n3\t21684475\t155995:2\tC\t]3:21682213]C\t99\tPASS\tEVDNC=ASSMB;INSERTION=CTCTCTCTCTCTCTCTCTCTCTCC;MAPQ=60;MATEID=155995:1;MATENM=9;NM=3;NUMPARTS=2;SCTG=c_3_21658001_21683001_0C;SPAN=2262;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:34:6:9.3:102.3,9.3,0:34:0:-102.3:102.3\n3\t22050869\t156124:1\tG\tG[3:22056304[\t99\tPASS\tEVDNC=ASSMB;HOMSEQ=AAAAATTCAATGTG;MAPQ=60;MATEID=156124:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_3_22050001_22075001_1C;SPAN=5435;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:35:35:9.6:105.6,9.6,0:35:0:-105.6:105.6\n3\t22056304\t156124:2\tA\t]3:22050869]A\t99\tPASS\tEVDNC=ASSMB;HOMSEQ=AAAAATTCAATGTG;MAPQ=60;MATEID=156124:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_3_22050001_22075001_1C;SPAN=5435;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:35:35:9.6:105.6,9.6,0:35:0:-105.6:105.6\n3\t23466045\t167961:1\tT\tT[3:73822008[\t14\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AGAT;MAPQ=60;MATEID=167961:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_73818501_73843501_134C;SPAN=50355963;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:6:19:14.6:14.6,0,31.1:5:5:-14.47:14.88\n3\t26409479\t157128:1\tT\tT[3:26410808[\t92\tPASS\tEVDNC=ASSMB;HOMSEQ=T;MAPQ=60;MATEID=157128:2;MATENM=2;NM=3;NUMPARTS=2;SCTG=c_3_26386501_26411501_35C;SPAN=1329;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:30:15:8.4:92.4,8.4,0:30:0:-92.42:92.42\n3\t26410808\t157128:2\tT\t]3:26409479]T\t92\tPASS\tEVDNC=ASSMB;HOMSEQ=T;MAPQ=60;MATEID=157128:1;MATENM=3;NM=2;NUMPARTS=2;SCTG=c_3_26386501_26411501_35C;SPAN=1329;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:30:15:8.4:92.4,8.4,0:30:0:-92.42:92.42\n3\t28705934\t157608:1\tC\t[3:28772274[C\t31\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;MAPQ=60;MATEID=157608:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_28763001_2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RTS=2;SCTG=c_3_63504001_63529001_88C;SPAN=464684;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:51:88:77.6:143.6,0,77.6:36:34:-144.7:144.7\n3\t63528112\t165000:2\tC\tC[3:62858227[\t62\tPASS\tEVDNC=ASSMB;HOMSEQ=CTC;MAPQ=60;MATEID=165000:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_3_63504001_63529001_97C;SPAN=669885;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:26:82:62.9:62.9,0,142.1:26:0:-62.78:64.53\n3\t63626756\t165075:2\tC\t]1:114690356]C\t50\tPASS\tEVDNC=ASSMB;INSERTION=CAAAAGC;MAPQ=60;MATEID=165075:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_63626501_63651501_4C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:22:81:50:50,0,152.3:22:0:-49.85:52.82\n3\t63718451\t810346:1\tT\t]17:60802106]T\t99\tPASS\tEVDNC=ASSMB;HOMSEQ=TTG;MAPQ=60;MATEID=810346:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_17_60784501_60809501_53C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:51:80:53.6:146,0,53.6:51:0:-148.1:148.1\n3\t63755964\t165192:1\tC\tC[3:63992058[\t99\tPASS\tEVDNC=ASSMB;HOMSEQ=C;MAPQ=60;MATEID=165192:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_63969501_63994501_3C;SPAN=236094;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:56:119:99:151.4,0,148.1:56:0:-151.4:151.4\n3\t63948014\t165185:2\tG\tG[1:106192958[\t99\tPASS\tEVDNC=ASSMB;HOMSEQ=AG;MAPQ=60;MATEID=165185:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_63945001_63970001_2C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:49:53:14.7:161.7,14.7,0:49:0:-160.5:160.5\n3\t63976823\t809737:1\tA\t]17:58731201]A\t38\tPASS\tEVDNC=ASSMB;HOMSEQ=ACCT;MAPQ=60;MATEID=809737:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_17_58726501_58751501_107C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:19:88:38:38,0,183.2:19:0:-37.98:43.43\n3\t63992058\t165192:2\tC\t]3:63755964]C\t99\tPASS\tEVDNC=ASSMB;HOMSEQ=C;MAPQ=60;MATEID=165192:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_63969501_63994501_3C;SPAN=236094;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:56:119:99:151.4,0,148.1:56:0:-151.4:151.4\n3\t64698562\t27426:2\tT\t]1:113801494]T\t25\tPASS\tEVDNC=ASSMB;HOMSEQ=T;MAPQ=60;MATEID=27426:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_1_113778001_113803001_22C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:50:25.7:25.7,0,98.3:12:0:-25.56:28.06\n3\t66074255\t165649:1\tC\t]3:66074906]C\t84\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=CCAGGCGCAGTGGCTCATGCCTGTAATCCCAGCACTTTGGGAGGC;MAPQ=60;MATEID=165649:2;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_3_66052001_66077001_132C;SPAN=651;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:29:39:12.2:84.8,0,12.2:16:21:-87.73:87.73\n3\t66074906\t165649:2\tC\tC[3:66074255[\t84\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=CCAGGCGCAGTGGCTCATGCCTGTAATCCCAGCACTTTGGGAGGC;MAPQ=60;MATEID=165649:1;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_3_66052001_66077001_132C;SPAN=651;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:29:39:12.2:84.8,0,12.2:16:21:-87.73:87.73\n3\t66713349\t165844:1\tG\t]3:66713486]G\t29\tPASS\tEVDNC=ASSMB;HOMSEQ=G;MAPQ=60;MATEID=165844:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_66689001_66714001_52C;SPAN=137;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:35:29.9:29.9,0,56.3:12:0:-29.77:30.28\n3\t66713486\t165844:2\tG\tG[3:66713349[\t29\tPASS\tEVDNC=ASSMB;HOMSEQ=G;MAPQ=60;MATEID=165844:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_66689001_66714001_52C;SPAN=137;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:35:29.9:29.9,0,56.3:12:0:-29.77:30.28\n3\t67443400\t166105:1\tC\tC[3:67446375[\t36\tPASS\tDISC_MAPQ=58;EVDNC=DSCRD;IMPRECISE;MAPQ=58;MATEID=166105:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=3:67443400(+)-3:67446375(-)__3_67424001_67449001D;SPAN=2975;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:11:12:3.3:36.3,3.3,0:0:11:-35.86:35.86\n3\t67446375\t166105:2\tA\t]3:67443400]A\t36\tPASS\tDISC_MAPQ=48;EVDNC=DSCRD;IMPRECISE;MAPQ=48;MATEID=166105:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=3:67443400(+)-3:67446375(-)__3_67424001_67449001D;SPAN=2975;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:11:12:3.3:36.3,3.3,0:0:11:-35.86:35.86\n3\t67849380\t166213:1\tA\tA[3:67851162[\t23\tPASS\tEVDNC=ASSMB;HOMSEQ=TTA;MAPQ=60;MATEID=166213:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_67840501_67865501_21C;SPAN=1782;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:22:23.6:23.6,0,30.2:9:0:-23.53:23.59\n3\t67851162\t166213:2\tT\t]3:67849380]T\t23\tPASS\tEVDNC=ASSMB;HOMSEQ=TTA;MAPQ=60;MATEID=166213:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_67840501_67865501_21C;SPAN=1782;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:22:23.6:23.6,0,30.2:9:0:-23.53:23.59\n3\t67959153\t166245:1\tA\tA[3:67960425[\t59\tPASS\tEVDNC=ASSMB;HOMSEQ=CAA;MAPQ=60;MATEID=166245:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_67938501_67963501_55C;SPAN=1272;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:20:20:5.4:59.4,5.4,0:20:0:-59.41:59.41\n3\t67960425\t166245:2\tC\t]3:67959153]C\t59\tPASS\tEVDNC=ASSMB;HOMSEQ=CAA;MAPQ=60;MATEID=166245:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_67938501_67963501_55C;SPAN=1272;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:20:20:5.4:59.4,5.4,0:20:0:-59.41:59.41\n3\t68585622\t166416:1\tT\tT[3:68591103[\t18\tPASS\tEVDNC=ASSMB;HOMSEQ=ACT;MAPQ=60;MATEID=166416:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_68575501_68600501_24C;SPAN=5481;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:29:18.2:18.2,0,54.5:8:0:-18.26:19.27\n3\t68591103\t166416:2\tA\t]3:68585622]A\t18\tPASS\tEVDNC=ASSMB;HOMSEQ=ACT;MAPQ=60;MATEID=166416:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_68575501_68600501_24C;SPAN=5481;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:29:18.2:18.2,0,54.5:8:0:-18.26:19.27\n3\t68841064\t166474:1\tA\tA[3:68841345[\t27\tPASS\tEVDNC=ASSMB;HOMSEQ=AATAAAATCCA;MAPQ=60;MATEID=166474:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_68820501_68845501_187C;SPAN=281;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:19:17.9:27.8,0,17.9:10:0:-27.73:27.73\n3\t68841345\t166474:2\tA\t]3:68841064]A\t27\tPASS\tEVDNC=ASSMB;HOMSEQ=AATAAAATCCA;MAPQ=60;MATEID=166474:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_68820501_68845501_187C;SPAN=281;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:19:17.9:27.8,0,17.9:10:0:-27.73:27.73\n3\t70894164\t167013:1\tT\tT[3:70894499[\t99\tPASS\tDISC_MAPQ=42;EVDNC=ASDIS;INSERTION=GGT;MAPQ=60;MATEID=167013:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_70878501_70903501_21C;SPAN=335;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:33:5:9:99,9,0:27:8:-99.02:99.02\n3\t70894499\t167013:2\tT\t]3:70894164]T\t99\tPASS\tDISC_MAPQ=31;EVDNC=ASDIS;INSERTION=GGT;MAPQ=60;MATEID=167013:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_70878501_70903501_21C;SPAN=335;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:33:5:9:99,9,0:27:8:-99.02:99.02\n3\t72330575\t167459:1\tA\tA[3:72330856[\t52\tPASS\tEVDNC=ASSMB;HOMSEQ=AAAAACGAAGACAGTA;MAPQ=60;MATEID=167459:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_72324001_72349001_32C;SPAN=281;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:18:26:12.5:52.1,0,12.5:18:0:-53.39:53.39\n3\t72330856\t167459:2\tA\t]3:72330575]A\t52\tPASS\tEVDNC=ASSMB;HOMSEQ=AAAAACGAAGACAGTA;MAPQ=60;MATEID=167459:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_72324001_72349001_32C;SPAN=281;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:18:26:12.5:52.1,0,12.5:18:0:-53.39:53.39\n3\t73013926\t167710:1\tC\tC[3:73014404[\t43\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;MAPQ=60;MATEID=167710:2;MATENM=0;NM=3;NUMPARTS=2;SCTG=c_3_73010001_73035001_71C;SPAN=478;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:15:21:7.4:43.7,0,7.4:5:10:-44.87:44.87\n3\t73014404\t167710:2\tG\t]3:73013926]G\t43\tPASS\tDISC_MAPQ=59;EVDNC=ASDIS;MAPQ=60;MATEID=167710:1;MATENM=3;NM=0;NUMPARTS=2;SCTG=c_3_73010001_73035001_71C;SPAN=478;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:15:21:7.4:43.7,0,7.4:5:10:-44.87:44.87\n3\t73822008\t167961:2\tA\t]3:23466045]A\t14\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AGAT;MAPQ=60;MATEID=167961:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_73818501_73843501_134C;SPAN=50355963;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:6:19:14.6:14.6,0,31.1:5:5:-14.47:14.88\n3\t74716275\t168219:1\tT\tT[3:74716585[\t46\tPASS\tEVDNC=ASSMB;HOMSEQ=TAAAGTTATTTTCT;MAPQ=60;MATEID=168219:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_74700501_74725501_73C;SPAN=310;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:16:24:13.1:46.1,0,13.1:16:0:-46.99:46.99\n3\t74716585\t168219:2\tT\t]3:74716275]T\t46\tPASS\tEVDNC=ASSMB;HOMSEQ=TAAAGTTATTTTCT;MAPQ=60;MATEID=168219:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_74700501_74725501_73C;SPAN=310;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:16:24:13.1:46.1,0,13.1:16:0:-46.99:46.99\n3\t75414219\t189909:1\tT\tT[3:130080581[\t49\tPASS\tDISC_MAPQ=49;EVDNC=DSCRD;IMPRECISE;MAPQ=49;MATEID=189909:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=3:75414219(+)-3:130080581(-)__3_130070501_130095501D;SPAN=54666362;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:17:7:4.5:49.5,4.5,0:0:17:-49.51:49.51\n3\t75414274\t378752:1\tT\t]7:6923050]T\t30\tPASS\tDISC_MAPQ=46;EVDNC=DSCRD;IMPRECISE;MAPQ=46;MATEID=378752:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=3:75414274(-)-7:6923050(+)__7_6909001_6934001D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:20:17.6:30.8,0,17.6:0:11:-30.82:30.82\n3\t75662822\t872855:1\tA\tA]20:29418432]\t23\tPASS\tDISC_MAPQ=43;EVDNC=DSCRD;IMPRECISE;MAPQ=43;MATEID=872855:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=3:75662822(+)-20:29418432(+)__20_29400001_29425001D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:23:23.3:23.3,0,33.2:0:9:-23.24:23.37\n3\t75668011\t168580:1\tA\tA]20:29412524]\t37\tPASS\tDISC_MAPQ=30;EVDNC=DSCRD;IMPRECISE;MAPQ=30;MATEID=168580:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=3:75668011(+)-20:29412524(+)__3_75656001_75681001D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:15:44:37.1:37.1,0,73.4:0:15:-37.15:37.81\n3\t75673010\t872869:1\tA\t[20:29407505[A\t33\tPASS\tDISC_MAPQ=45;EVDNC=DSCRD;IMPRECISE;MAPQ=45;MATEID=872869:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=3:75673010(-)-20:29407505(-)__20_29400001_29425001D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:45:33.5:33.5,0,79.7:0:14:-33.57:34.6\n3\t75703640\t168761:1\tT\t[20:29375944[T\t66\tPASS\tDISC_MAPQ=34;EVDNC=DSCRD;IMPRECISE;MAPQ=34;MATEID=168761:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=3:75703640(-)-20:29375944(-)__3_75680501_75705501D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:22:26:0.6:66,0.6,0:0:22:-69.34:69.34\n3\t80013716\t170496:1\tA\tA]3:80016128]\t36\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;INSERTION=TA;MAPQ=60;MATEID=170496:2;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_3_79992501_80017501_19C;SPAN=2412;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:22:17:36.8,0,17:9:4:-37.05:37.05\n3\t80015320\t170497:1\tA\t[3:80015952[A\t45\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AGTTG;MAPQ=60;MATEID=170497:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_3_79992501_80017501_23C;SPAN=632;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:16:26:19.1:45.5,0,19.1:15:6:-46.05:46.05\n3\t80015952\t170497:2\tC\t[3:80015320[C\t45\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AGTTG;MAPQ=60;MATEID=170497:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_3_79992501_80017501_23C;SPAN=632;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:16:26:19.1:45.5,0,19.1:15:6:-46.05:46.05\n3\t80016128\t170496:2\tA\tA]3:80013716]\t36\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;INSERTION=TA;MAPQ=60;MATEID=170496:1;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_3_79992501_80017501_19C;SPAN=2412;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:22:17:36.8,0,17:9:4:-37.05:37.05\n3\t80876163\t170815:1\tT\tT[3:80877454[\t95\tPASS\tEVDNC=ASSMB;HOMSEQ=TTT;MAPQ=60;MATEID=170815:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_80874501_80899501_60C;SPAN=1291;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:31:36:3.3:95.7,3.3,0:31:0:-98.33:98.33\n3\t80877454\t170815:2\tT\t]3:80876163]T\t95\tPASS\tEVDNC=ASSMB;HOMSEQ=TTT;MAPQ=60;MATEID=170815:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_80874501_80899501_60C;SPAN=1291;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:31:36:3.3:95.7,3.3,0:31:0:-98.33:98.33\n3\t81296931\t170944:1\tG\tG[3:81297230[\t13\tPASS\tEVDNC=ASSMB;HOMSEQ=AAAAATGAGTACCTGTG;MAPQ=60;MATEID=170944:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_81291001_81316001_36C;SPAN=299;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:6:22:13.7:13.7,0,40.1:6:0:-13.62:14.42\n3\t81297230\t170944:2\tA\t]3:81296931]A\t13\tPASS\tEVDNC=ASSMB;HOMSEQ=AAAAATGAGTACCTGTG;MAPQ=60;MATEID=170944:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_81291001_81316001_36C;SPAN=299;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:6:22:13.7:13.7,0,40.1:6:0:-13.62:14.42\n3\t81858356\t171075:1\tC\tC[3:81858662[\t99\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AAAAACTGGTAAACC;MAPQ=60;MATEID=171075:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_81854501_81879501_38C;SPAN=306;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:35:20:9.6:105.6,9.6,0:27:11:-105.6:105.6\n3\t81858662\t171075:2\tA\t]3:81858356]A\t99\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AAAAACTGGTAAACC;MAPQ=60;MATEID=171075:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_81854501_81879501_38C;SPAN=306;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:35:20:9.6:105.6,9.6,0:27:11:-105.6:105.6\n3\t83803977\t171677:1\tT\tT[3:83806199[\t89\tPASS\tEVDNC=ASSMB;HOMSEQ=TATATGGCCTTTT;MAPQ=60;MATEID=171677:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_83790001_83815001_51C;SPAN=2222;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:29:20:8.1:89.1,8.1,0:29:0:-89.12:89.12\n3\t83806199\t171677:2\tT\t]3:83803977]T\t89\tPASS\tEVDNC=ASSMB;HOMSEQ=TATATGGCCTTTT;MAPQ=60;MATEID=171677:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_83790001_83815001_51C;SPAN=2222;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:29:20:8.1:89.1,8.1,0:29:0:-89.12:89.12\n3\t84055791\t171778:1\tC\tC[3:84058234[\t23\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;MAPQ=60;MATEID=171778:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_84035001_84060001_31C;SPAN=2443;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:22:23.6:23.6,0,30.2:8:2:-23.53:23.59\n3\t84058234\t171778:2\tA\t]3:84055791]A\t23\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;MAPQ=60;MATEID=171778:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_84035001_84060001_31C;SPAN=2443;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:22:23.6:23.6,0,30.2:8:2:-23.53:23.59\n3\t88404582\t173339:1\tT\tT[3:88404859[\t66\tPASS\tEVDNC=ASSMB;HOMSEQ=CT;MAPQ=60;MATEID=173339:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_88396001_88421001_37C;SPAN=277;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:22:21:6:66,6,0:22:0:-66.02:66.02\n3\t88404859\t173339:2\tC\t]3:88404582]C\t66\tPASS\tEVDNC=ASSMB;HOMSEQ=CT;MAPQ=60;MATEID=173339:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_88396001_88421001_37C;SPAN=277;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:22:21:6:66,6,0:22:0:-66.02:66.02\n3\t89460367\t398109:1\tT\t]7:62334070]T\t44\tPASS\tDISC_MAPQ=35;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=398109:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_62328001_62353001_253C;SPAN=-1;SUBN=4;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:15:20:4.4:44,0,4.4:5:14:-45.49:45.49\n3\t90350671\t173897:1\tT\t]3:90351556]T\t21\tPASS\tDISC_MAPQ=53;EVDNC=ASDIS;HOMSEQ=TCCAAATATCCACTTGCAGATTTTACAAAAAG;MAPQ=39;MATEID=173897:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_90331501_90356501_118C;SPAN=885;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:31:21.2:21.2,0,54.2:2:8:-21:21.92\n3\t90351556\t173897:2\tG\tG[3:90350671[\t21\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TCCAAATATCCACTTGCAGATTTTACAAAAAG;MAPQ=60;MATEID=173897:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_90331501_90356501_118C;SPAN=885;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:31:21.2:21.2,0,54.2:2:8:-21:21.92\n3\t90402956\t173942:1\tA\t]3:90403683]A\t26\tPASS\tDISC_MAPQ=55;EVDNC=ASDIS;HOMSEQ=AAAGAAGTTTCTGAGAATGCTTCTGTCTAGTTTTTATGTG;MAPQ=60;MATEID=173942:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_90380501_90405501_95C;SPAN=727;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:47:26.6:26.6,0,89.3:8:6:-26.4:28.44\n3\t90403683\t173942:2\tG\tG[3:90402956[\t26\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AAAGAAGTTTCTGAGAATGCTTCTGTCTAGTTTTTATGTG;MAPQ=60;MATEID=173942:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_90380501_90405501_95C;SPAN=727;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:47:26.6:26.6,0,89.3:8:6:-26.4:28.44\n3\t90498706\t174243:1\tG\tG[3:90599779[\t17\tPASS\tDISC_MAPQ=53;EVDNC=DSCRD;IMPRECISE;MAPQ=53;MATEID=174243:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=3:90498706(+)-3:90599779(-)__3_90478501_90503501D;SPAN=101073;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:30:17.9:17.9,0,57.5:0:8:-17.98:19.13\n3\t90536612\t174785:1\tC\tC[3:90537933[\t21\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TTTCTGAGAATTCTTCTGTCTAGTTTTATATGAAGAAATC;MAPQ=60;MATEID=174785:2;MATENM=2;NM=1;NUMPARTS=2;SCTG=c_3_90527501_90552501_470C;SPAN=1321;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:78:21.2:21.2,0,173:8:6:-20.99:28.09\n3\t90537933\t174785:2\tT\t]3:90536612]T\t21\tPASS\tDISC_MAPQ=56;EVDNC=ASDIS;HOMSEQ=TTTCTGAGAATTCTTCTGTCTAGTTTTATATGAAGAAATC;MAPQ=60;MATEID=174785:1;MATENM=1;NM=2;NUMPARTS=2;SCTG=c_3_90527501_90552501_470C;SPAN=1321;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:78:21.2:21.2,0,173:8:6:-20.99:28.09\n3\t90599779\t174243:2\tT\t]3:90498706]T\t17\tPASS\tDISC_MAPQ=22;EVDNC=DSCRD;IMPRECISE;MAPQ=22;MATEID=174243:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=3:90498706(+)-3:90599779(-)__3_90478501_90503501D;SPAN=101073;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:30:17.9:17.9,0,57.5:0:8:-17.98:19.13\n3\t90785200\t177847:1\tA\tA[3:90900668[\t66\tPASS\tDISC_MAPQ=34;EVDNC=DSCRD;IMPRECISE;MAPQ=34;MATEID=177847:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=3:90785200(+)-3:90900668(-)__3_90895001_90920001D;SPAN=115468;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:22:8:6:66,6,0:0:22:-66.02:66.02\n3\t90793288\t177493:1\tA\t]3:90968900]A\t19\tPASS\tDISC_MAPQ=19;EVDNC=DSCRD;IMPRECISE;MAPQ=19;MATEID=177493:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=3:90793288(-)-3:90968900(+)__3_90772501_90797501D;SPAN=175612;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:48:19.7:19.7,0,98.9:0:10:-19.52:22.68\n3\t90832509\t177854:1\tT\t]3:90914890]T\t26\tPASS\tDISC_MAPQ=20;EVDNC=DSCRD;IMPRECISE;MAPQ=20;MATEID=177854:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=3:90832509(-)-3:90914890(+)__3_90895001_90920001D;SPAN=82381;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:9:8:2.4:26.4,2.4,0:0:9:-26.41:26.41\n3\t90863052\t178318:1\tT\tT[3:91078769[\t79\tPASS\tDISC_MAPQ=16;EVDNC=DSCRD;IMPRECISE;MAPQ=16;MATEID=178318:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=3:90863052(+)-3:91078769(-)__3_91066501_91091501D;SPAN=215717;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:26:31:1.8:79.2,1.8,0:0:26:-81.69:81.69\n3\t90871032\t178673:1\tA\tA[3:91221920[\t27\tPASS\tDISC_MAPQ=43;EVDNC=DSCRD;IMPRECISE;MAPQ=43;MATEID=178673:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=3:90871032(+)-3:91221920(-)__3_91213501_91238501D;SPAN=350888;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:20:20.9:27.5,0,20.9:0:10:-27.41:27.41\n3\t90900668\t177847:2\tC\t]3:90785200]C\t66\tPASS\tDISC_MAPQ=28;EVDNC=DSCRD;IMPRECISE;MAPQ=28;MATEID=177847:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=3:90785200(+)-3:90900668(-)__3_90895001_90920001D;SPAN=115468;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:22:8:6:66,6,0:0:22:-66.02:66.02\n3\t90914890\t177854:2\tC\tC[3:90832509[\t26\tPASS\tDISC_MAPQ=30;EVDNC=DSCRD;IMPRECISE;MAPQ=30;MATEID=177854:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=3:90832509(-)-3:90914890(+)__3_90895001_90920001D;SPAN=82381;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:9:8:2.4:26.4,2.4,0:0:9:-26.41:26.41\n3\t90925354\t177943:1\tT\t]3:91069782]T\t49\tPASS\tDISC_MAPQ=33;EVDNC=DSCRD;IMPRECISE;MAPQ=33;MATEID=177943:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=3:90925354(-)-3:91069782(+)__3_90919501_90944501D;SPAN=144428;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:17:4:4.5:49.5,4.5,0:0:17:-49.51:49.51\n3\t90968900\t177493:2\tT\tT[3:90793288[\t19\tPASS\tDISC_MAPQ=42;EVDNC=DSCRD;IMPRECISE;MAPQ=42;MATEID=177493:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=3:90793288(-)-3:90968900(+)__3_90772501_90797501D;SPAN=175612;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:48:19.7:19.7,0,98.9:0:10:-19.52:22.68\n3\t91069782\t177943:2\tA\tA[3:90925354[\t49\tPASS\tDISC_MAPQ=16;EVDNC=DSCRD;IMPRECISE;MAPQ=16;MATEID=177943:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=3:90925354(-)-3:91069782(+)__3_90919501_90944501D;SPAN=144428;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:17:4:4.5:49.5,4.5,0:0:17:-49.51:49.51\n3\t91078769\t178318:2\tT\t]3:90863052]T\t79\tPASS\tDISC_MAPQ=29;EVDNC=DSCRD;IMPRECISE;MAPQ=29;MATEID=178318:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=3:90863052(+)-3:91078769(-)__3_91066501_91091501D;SPAN=215717;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:26:31:1.8:79.2,1.8,0:0:26:-81.69:81.69\n3\t91221920\t178673:2\tC\t]3:90871032]C\t27\tPASS\tDISC_MAPQ=42;EVDNC=DSCRD;IMPRECISE;MAPQ=42;MATEID=178673:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=3:90871032(+)-3:91221920(-)__3_91213501_91238501D;SPAN=350888;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:20:20.9:27.5,0,20.9:0:10:-27.41:27.41\n3\t93736476\t179203:1\tG\t]3:93737280]G\t37\tPASS\tDISC_MAPQ=57;EVDNC=DSCRD;IMPRECISE;MAPQ=57;MATEID=179203:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=3:93736476(-)-3:93737280(+)__3_93737001_93762001D;SPAN=804;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:20:11:37.4,0,11:0:13:-37.93:37.93\n3\t93737280\t179203:2\tT\tT[3:93736476[\t37\tPASS\tDISC_MAPQ=40;EVDNC=DSCRD;IMPRECISE;MAPQ=40;MATEID=179203:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=3:93736476(-)-3:93737280(+)__3_93737001_93762001D;SPAN=804;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:20:11:37.4,0,11:0:13:-37.93:37.93\n3\t95397364\t179722:1\tT\tT[3:95397679[\t49\tPASS\tEVDNC=ASSMB;HOMSEQ=CCAACCTGACTTACTT;MAPQ=60;MATEID=179722:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_95378501_95403501_7C;SPAN=315;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:17:17:4.5:49.5,4.5,0:17:0:-49.51:49.51\n3\t95397679\t179722:2\tC\t]3:95397364]C\t49\tPASS\tEVDNC=ASSMB;HOMSEQ=CCAACCTGACTTACTT;MAPQ=60;MATEID=179722:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_95378501_95403501_7C;SPAN=315;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:17:17:4.5:49.5,4.5,0:17:0:-49.51:49.51\n3\t95746924\t179868:1\tG\tG[3:95751920[\t35\tPASS\tEVDNC=ASSMB;HOMSEQ=CAAG;MAPQ=60;MATEID=179868:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_95746001_95771001_73C;SPAN=4996;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:28:35:35,0,35:13:0:-35.04:35.04\n3\t95749273\t179871:1\tA\t]3:95752156]A\t85\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;INSERTION=TGCATAGGG;MAPQ=60;MATEID=179871:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_95746001_95771001_35C;SPAN=2883;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:28:26:7.8:85.8,7.8,0:23:10:-85.82:85.82\n3\t95751920\t179868:2\tC\t]3:95746924]C\t35\tPASS\tEVDNC=ASSMB;HOMSEQ=CAAG;MAPQ=60;MATEID=179868:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_95746001_95771001_73C;SPAN=4996;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:28:35:35,0,35:13:0:-35.04:35.04\n3\t95752156\t179871:2\tT\tT[3:95749273[\t85\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;INSERTION=TGCATAGGG;MAPQ=60;MATEID=179871:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_95746001_95771001_35C;SPAN=2883;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:28:26:7.8:85.8,7.8,0:23:10:-85.82:85.82\n3\t99180219\t180863:1\tT\tT[3:99183546[\t26\tPASS\tEVDNC=ASSMB;HOMSEQ=CTT;MAPQ=60;MATEID=180863:2;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_3_99176001_99201001_115C;SPAN=3327;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:34:26.9:26.9,0,56.6:11:0:-26.75:27.42\n3\t99183546\t180863:2\tC\t]3:99180219]C\t26\tPASS\tEVDNC=ASSMB;HOMSEQ=CTT;MAPQ=60;MATEID=180863:1;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_3_99176001_99201001_115C;SPAN=3327;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:34:26.9:26.9,0,56.6:11:0:-26.75:27.42\n3\t99909938\t181038:1\tT\tT[3:99910788[\t40\tPASS\tEVDNC=ASSMB;INSERTION=T;MAPQ=60;MATEID=181038:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_99886501_99911501_48C;SPAN=850;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:21:10.7:40.4,0,10.7:14:0:-41.11:41.11\n3\t99910788\t181038:2\tC\t]3:99909938]C\t40\tPASS\tEVDNC=ASSMB;INSERTION=T;MAPQ=60;MATEID=181038:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_99886501_99911501_48C;SPAN=850;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:21:10.7:40.4,0,10.7:14:0:-41.11:41.11\n3\t100066519\t181071:1\tT\tT[3:100066813[\t59\tPASS\tEVDNC=ASSMB;HOMSEQ=GGCTTTGCTTCTT;MAPQ=60;MATEID=181071:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_100058001_100083001_45C;SPAN=294;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:18:20:5.4:59.4,5.4,0:18:0:-58.15:58.15\n3\t100066813\t181071:2\tG\t]3:100066519]G\t59\tPASS\tEVDNC=ASSMB;HOMSEQ=GGCTTTGCTTCTT;MAPQ=60;MATEID=181071:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_100058001_100083001_45C;SPAN=294;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:18:20:5.4:59.4,5.4,0:18:0:-58.15:58.15\n3\t101428791\t181443:1\tG\tG[3:101431411[\t26\tPASS\tDISC_MAPQ=45;EVDNC=ASDIS;HOMSEQ=ATTG;MAPQ=60;MATEID=181443:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_101430001_101455001_8C;SPAN=2620;SUBN=5;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:9:8:2.4:26.4,2.4,0:9:5:-26.41:26.41\n3\t101431411\t181443:2\tA\t]3:101428791]A\t26\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=ATTG;MAPQ=60;MATEID=181443:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_101430001_101455001_8C;SPAN=2620;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:9:8:2.4:26.4,2.4,0:9:5:-26.41:26.41\n3\t101469536\t181461:1\tA\tA[3:101469849[\t25\tPASS\tDISC_MAPQ=49;EVDNC=ASDIS;HOMSEQ=AAAAGAACAGA;MAPQ=60;MATEID=181461:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_101454501_101479501_125C;SPAN=313;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:15:12.2:25.4,0,12.2:5:5:-25.74:25.74\n3\t101469849\t181461:2\tA\t]3:101469536]A\t25\tPASS\tDISC_MAPQ=30;EVDNC=ASDIS;HOMSEQ=AAAAGAACAGA;MAPQ=60;MATEID=181461:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_101454501_101479501_125C;SPAN=313;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:15:12.2:25.4,0,12.2:5:5:-25.74:25.74\n3\t102564943\t181797:1\tT\tT[3:102565269[\t16\tPASS\tEVDNC=ASSMB;HOMSEQ=ATTTCCTCTTCTT;MAPQ=60;MATEID=181797:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_102557001_102582001_6C;SPAN=326;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:7:24:16.4:16.4,0,42.8:7:0:-16.36:17.07\n3\t102565269\t181797:2\tA\t]3:102564943]A\t16\tPASS\tEVDNC=ASSMB;HOMSEQ=ATTTCCTCTTCTT;MAPQ=60;MATEID=181797:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_102557001_102582001_6C;SPAN=326;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:7:24:16.4:16.4,0,42.8:7:0:-16.36:17.07\n3\t103091520\t181926:1\tT\tT[3:103091820[\t62\tPASS\tEVDNC=ASSMB;HOMSEQ=TAGTTTTATTTTTCT;MAPQ=60;MATEID=181926:2;MATENM=2;NM=4;NUMPARTS=2;SCTG=c_3_103071501_103096501_29C;SPAN=300;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:20:23:3:62.7,3,0:20:0:-63.68:63.68\n3\t103091820\t181926:2\tT\t]3:103091520]T\t62\tPASS\tEVDNC=ASSMB;HOMSEQ=TAGTTTTATTTTTCT;MAPQ=60;MATEID=181926:1;MATENM=4;NM=2;NUMPARTS=2;SCTG=c_3_103071501_103096501_29C;SPAN=300;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:20:23:3:62.7,3,0:20:0:-63.68:63.68\n3\t103194123\t181974:1\tA\tA[3:103195276[\t35\tPASS\tEVDNC=ASSMB;HOMSEQ=TA;MAPQ=60;MATEID=181974:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_103194001_103219001_10C;SPAN=1153;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:25:26:35.9,0,26:13:0:-35.95:35.95\n3\t103195276\t181974:2\tT\t]3:103194123]T\t35\tPASS\tEVDNC=ASSMB;HOMSEQ=TA;MAPQ=60;MATEID=181974:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_103194001_103219001_10C;SPAN=1153;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:25:26:35.9,0,26:13:0:-35.95:35.95\n3\t103962954\t671890:1\tT\t]13:60886851]T\t33\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;INSERTION=T;MAPQ=60;MATEID=671890:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_13_60882501_60907501_30C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:11:9:3:33,3,0:9:4:-33.01:33.01\n3\t104229404\t182318:1\tT\tT[3:104240690[\t20\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=T;MAPQ=60;MATEID=182318:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_104223001_104248001_62C;SPAN=11286;SUBN=1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:20:20.9:20.9,0,27.5:2:7:-20.79:20.87\n3\t104240690\t182318:2\tT\t]3:104229404]T\t20\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=T;MAPQ=60;MATEID=182318:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_104223001_104248001_62C;SPAN=11286;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:20:20.9:20.9,0,27.5:2:7:-20.79:20.87\n3\t104559356\t182457:1\tA\tA[3:104560203[\t35\tPASS\tEVDNC=ASSMB;HOMSEQ=A;MAPQ=60;MATEID=182457:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_104541501_104566501_2C;SPAN=847;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:26:29:35.6,0,29:13:0:-35.63:35.63\n3\t104560203\t182457:2\tA\t]3:104559356]A\t35\tPASS\tEVDNC=ASSMB;HOMSEQ=A;MAPQ=60;MATEID=182457:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_104541501_104566501_2C;SPAN=847;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:26:29:35.6,0,29:13:0:-35.63:35.63\n3\t107017130\t183282:1\tG\tG[3:107017386[\t18\tPASS\tEVDNC=ASSMB;INSERTION=A;MAPQ=60;MATEID=183282:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_107016001_107041001_83C;SPAN=256;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:28:18.5:18.5,0,51.5:8:0:-18.54:19.42\n3\t107017386\t183282:2\tG\t]3:107017130]G\t18\tPASS\tEVDNC=ASSMB;INSERTION=A;MAPQ=60;MATEID=183282:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_107016001_107041001_83C;SPAN=256;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:28:18.5:18.5,0,51.5:8:0:-18.54:19.42\n3\t107319102\t183337:1\tG\tG[3:107321486[\t85\tPASS\tEVDNC=ASSMB;INSERTION=AAAAT;MAPQ=60;MATEID=183337:2;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_3_107310001_107335001_68C;SPAN=2384;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:28:21:7.8:85.8,7.8,0:28:0:-85.82:85.82\n3\t107321486\t183337:2\tG\t]3:107319102]G\t85\tPASS\tEVDNC=ASSMB;INSERTION=AAAAT;MAPQ=60;MATEID=183337:1;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_3_107310001_107335001_68C;SPAN=2384;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:28:21:7.8:85.8,7.8,0:28:0:-85.82:85.82\n3\t108262809\t183955:1\tA\t[3:109509118[A\t20\tPASS\tDISC_MAPQ=20;EVDNC=DSCRD;IMPRECISE;MAPQ=20;MATEID=183955:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=3:108262809(-)-3:109509118(-)__3_109490501_109515501D;SPAN=1246309;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:22:20.3:20.3,0,33.5:0:8:-20.22:20.45\n3\t108561275\t183679:1\tG\t]3:108624761]G\t52\tPASS\tEVDNC=ASSMB;HOMSEQ=GG;MAPQ=60;MATEID=183679:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_108608501_108633501_41C;SPAN=63486;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:18:17:4.8:52.8,4.8,0:18:0:-52.81:52.81\n3\t108571285\t183658:1\tA\t]3:108599231]A\t41\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AT;MAPQ=60;MATEID=183658:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_3_108559501_108584501_45C;SPAN=27946;SUBN=1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:15:28:28.4:41.6,0,28.4:9:8:-41.77:41.77\n3\t108599231\t183658:2\tT\tT[3:108571285[\t41\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AT;MAPQ=60;MATEID=183658:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_3_108559501_108584501_45C;SPAN=27946;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:15:28:28.4:41.6,0,28.4:9:8:-41.77:41.77\n3\t108624761\t183679:2\tG\tG[3:108561275[\t52\tPASS\tEVDNC=ASSMB;HOMSEQ=GG;MAPQ=60;MATEID=183679:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_108608501_108633501_41C;SPAN=63486;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:18:17:4.8:52.8,4.8,0:18:0:-52.81:52.81\n3\t109509118\t183955:2\tT\t[3:108262809[T\t20\tPASS\tDISC_MAPQ=29;EVDNC=DSCRD;IMPRECISE;MAPQ=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3_125195001_125220001_17C;SPAN=869;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:17:2:38.3,0,2:13:0:-39.65:39.65\n3\t125218320\t188523:2\tG\t]3:125217451]G\t38\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=188523:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_125195001_125220001_17C;SPAN=869;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:17:2:38.3,0,2:13:0:-39.65:39.65\n3\t125720746\t188658:1\tG\t]3:125743434]G\t26\tPASS\tDISC_MAPQ=26;EVDNC=DSCRD;IMPRECISE;MAPQ=26;MATEID=188658:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=3:125720746(-)-3:125743434(+)__3_125709501_125734501D;SPAN=22688;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:9:7:2.4:26.4,2.4,0:0:9:-26.41:26.41\n3\t125743434\t188658:2\tA\tA[3:125720746[\t26\tPASS\tDISC_MAPQ=40;EVDNC=DSCRD;IMPRECISE;MAPQ=40;MATEID=188658:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=3:125720746(-)-3:125743434(+)__3_125709501_125734501D;SPAN=22688;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:9:7:2.4:26.4,2.4,0:0:9:-26.41:26.41\n3\t126640095\t189005:1\tT\tT[3:126640407[\t35\tPASS\tEVDNC=ASSMB;HOMSEQ=GCTGCTTGTGTTTTCT;MAPQ=60;MATEID=189005:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_126616001_126641001_28C;SPAN=312;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:26:29:35.6,0,29:13:0:-35.63:35.63\n3\t126640407\t189005:2\tG\t]3:126640095]G\t35\tPASS\tEVDNC=ASSMB;HOMSEQ=GCTGCTTGTGTTTTCT;MAPQ=60;MATEID=189005:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_126616001_126641001_28C;SPAN=312;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:26:29:35.6,0,29:13:0:-35.63:35.63\n3\t128140300\t987204:1\tC\t]Un_KN707627v1_decoy:5821]C\t56\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=987204:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_478_1_5821_13C;SPAN=-1;SUBN=7;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:19:5:5.1:56.1,5.1,0:19:0:-56.11:56.11\n3\t128657391\t611288:1\tC\t[11:129051675[C\t17\tPASS\tDISC_MAPQ=255;EVDNC=ASDIS;HOMSEQ=GGCTGGG;MAPQ=60;MATEID=611288:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_11_129041501_129066501_11C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:7:19:17.9:17.9,0,27.8:4:3:-17.77:17.94\n3\t130044539\t189911:1\tC\tC[3:130087903[\t72\tPASS\tEVDNC=ASSMB;HOMSEQ=AC;MAPQ=60;MATEID=189911:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_130070501_130095501_18C;SPAN=43364;SUBN=2;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:24:21:6.6:72.6,6.6,0:24:0:-72.62:72.62\n3\t130080581\t189909:2\tC\t]3:75414219]C\t49\tPASS\tDISC_MAPQ=20;EVDNC=DSCRD;IMPRECISE;MAPQ=20;MATEID=189909:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=3:75414219(+)-3:130080581(-)__3_130070501_130095501D;SPAN=54666362;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:17:7:4.5:49.5,4.5,0:0:17:-49.51:49.51\n3\t130087903\t189911:2\tA\t]3:130044539]A\t72\tPASS\tEVDNC=ASSMB;HOMSEQ=AC;MAPQ=60;MATEID=189911:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_130070501_130095501_18C;SPAN=43364;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:24:21:6.6:72.6,6.6,0:24:0:-72.62:72.62\n3\t130167162\t189995:1\tT\tT[12:8307812[\t23\tPASS\tDISC_MAPQ=27;EVDNC=DSCRD;IMPRECISE;MAPQ=27;MATEID=189995:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=3:130167162(+)-12:8307812(-)__3_130144001_130169001D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:8:5:2.1:23.1,2.1,0:0:8:-23.11:23.11\n3\t130167390\t614848:1\tC\t]12:8308047]C\t22\tPASS\tDISC_MAPQ=47;EVDNC=DSCRD;IMPRECISE;MAPQ=47;MATEID=614848:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=3:130167390(-)-12:8308047(+)__12_8305501_8330501D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:14:12.5:22.4,0,12.5:0:8:-22.62:22.62\n3\t131958971\t190506:1\tT\tT[3:131959300[\t29\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=GATACACCTTTCT;MAPQ=60;MATEID=190506:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_131957001_131982001_39C;SPAN=329;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:59:29.6:29.6,0,118.7:11:6:-29.63:32.66\n3\t131959300\t190506:2\tG\t]3:131958971]G\t29\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=GATACACCTTTCT;MAPQ=60;MATEID=190506:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_131957001_131982001_39C;SPAN=329;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:59:29.6:29.6,0,118.7:11:6:-29.63:32.66\n3\t131989409\t190518:1\tT\tT[3:131994541[\t62\tPASS\tDISC_MAPQ=255;EVDNC=TSI_G;HOMSEQ=TG;INSERTION=TCTCATATCTGTTTTCCTGGTAGAATACAGCACCATGAGGGTAGGACTCT;MAPQ=60;MATEID=190518:2;MATENM=1;NM=0;NUMPARTS=3;SCTG=c_3_131981501_132006501_77C;SPAN=5132;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:21:21:5.7:62.7,5.7,0:21:0:-62.72:62.72\n3\t131989515\t190519:1\tC\t[3:131994541[C\t59\tPASS\tDISC_MAPQ=60;EVDNC=TSI_L;HOMSEQ=TG;MAPQ=60;MATEID=190519:2;MATENM=1;NM=0;NUMPARTS=3;SCTG=c_3_131981501_132006501_77C;SPAN=5026;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:19:20:5.4:59.4,5.4,0:17:7:-59.41:59.41\n3\t131994541\t190518:2\tT\t]3:131989409]T\t62\tPASS\tDISC_MAPQ=255;EVDNC=TSI_G;HOMSEQ=TG;INSERTION=TCTCATATCTGTTTTCCTGGTAGAATACAGCACCATGAGGGTAGGACTCT;MAPQ=60;MATEID=190518:1;MATENM=0;NM=1;NUMPARTS=3;SCTG=c_3_131981501_132006501_77C;SPAN=5132;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:21:21:5.7:62.7,5.7,0:21:0:-62.72:62.72\n3\t131994541\t190519:2\tT\t[3:131989515[T\t59\tPASS\tDISC_MAPQ=60;EVDNC=TSI_L;HOMSEQ=TG;MAPQ=60;MATEID=190519:1;MATENM=0;NM=1;NUMPARTS=3;SCTG=c_3_131981501_132006501_77C;SPAN=5026;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:19:20:5.4:59.4,5.4,0:17:7:-59.41:59.41\n3\t132270290\t190645:1\tG\tG[3:132276206[\t29\tPASS\tDISC_MAPQ=57;EVDNC=DSCRD;IMPRECISE;MAPQ=57;MATEID=190645:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=3:132270290(+)-3:132276206(-)__3_132275501_132300501D;SPAN=5916;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:10:4:2.7:29.7,2.7,0:0:10:-29.71:29.71\n3\t132276206\t190645:2\tA\t]3:132270290]A\t29\tPASS\tDISC_MAPQ=59;EVDNC=DSCRD;IMPRECISE;MAPQ=59;MATEID=190645:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=3:132270290(+)-3:132276206(-)__3_132275501_132300501D;SPAN=5916;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:10:4:2.7:29.7,2.7,0:0:10:-29.71:29.71\n3\t133884925\t191035:1\tA\t]3:133885105]A\t8\tPASS\tEVDNC=ASSMB;HOMSEQ=ACCAGAGGATGGGGGACTCACACACC;MAPQ=60;MATEID=191035:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_3_133868001_133893001_0C;SPAN=180;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:5:30:8:8,0,67.4:5:0:-8.072:10.8\n3\t133885105\t191035:2\tC\tC[3:133884925[\t8\tPASS\tEVDNC=ASSMB;HOMSEQ=ACCAGAGGATGGGGGACTCACACACC;MAPQ=60;MATEID=191035:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_3_133868001_133893001_0C;SPAN=180;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:5:30:8:8,0,67.4:5:0:-8.072:10.8\n3\t136302171\t191628:1\tC\tC[3:136307358[\t79\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;INSERTION=A;MAPQ=60;MATEID=191628:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_3_136293501_136318501_36C;SPAN=5187;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:26:19:7.2:79.2,7.2,0:17:19:-79.22:79.22\n3\t136307358\t191628:2\tT\t]3:136302171]T\t79\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;INSERTION=A;MAPQ=60;MATEID=191628:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_3_136293501_136318501_36C;SPAN=5187;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:26:19:7.2:79.2,7.2,0:17:19:-79.22:79.22\n3\t137595612\t192027:1\tT\tT[3:137597601[\t59\tPASS\tEVDNC=ASSMB;INSERTION=TATCTCTGCGCC;MAPQ=60;MATEID=192027:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_137592001_137617001_25C;SPAN=1989;SUBN=1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:20:20:5.4:59.4,5.4,0:20:0:-59.41:59.41\n3\t137597601\t192027:2\tC\t]3:137595612]C\t59\tPASS\tEVDNC=ASSMB;INSERTION=TATCTCTGCGCC;MAPQ=60;MATEID=192027:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_137592001_137617001_25C;SPAN=1989;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:20:20:5.4:59.4,5.4,0:20:0:-59.41:59.41\n3\t139885156\t234286:1\tA\tA]4:65936763]\t75\tPASS\tDISC_MAPQ=9;EVDNC=ASDIS;INSERTION=GG;MAPQ=31;MATEID=234286:2;MATENM=0;NM=12;NUMPARTS=2;SCTG=c_4_65929501_65954501_2C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:25:7:6.9:75.9,6.9,0:21:4:-75.92:75.92\n3\t140825566\t192860:1\tT\tT[3:140828201[\t31\tPASS\tEVDNC=ASSMB;HOMSEQ=CCACT;MAPQ=60;MATEID=192860:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_140826001_140851001_38C;SPAN=2635;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:17:8.6:31.7,0,8.6:11:0:-32.06:32.06\n3\t140828201\t192860:2\tC\t]3:140825566]C\t31\tPASS\tEVDNC=ASSMB;HOMSEQ=CCACT;MAPQ=60;MATEID=192860:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_140826001_140851001_38C;SPAN=2635;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:17:8.6:31.7,0,8.6:11:0:-32.06:32.06\n3\t144071898\t193746:1\tT\t]3:144089433]T\t41\tPASS\tDISC_MAPQ=58;EVDNC=ASDIS;HOMSEQ=T;MAPQ=60;MATEID=193746:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_144084501_144109501_46C;SPAN=17535;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:18:1.7:41.3,0,1.7:8:8:-42.92:42.92\n3\t144089433\t193746:2\tT\tT[3:144071898[\t41\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=T;MAPQ=60;MATEID=193746:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_144084501_144109501_46C;SPAN=17535;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:18:1.7:41.3,0,1.7:8:8:-42.92:42.92\n3\t146015409\t194390:1\tC\t]3:146015560]C\t34\tPASS\tEVDNC=ASSMB;HOMSEQ=CCT;MAPQ=60;MATEID=194390:2;MATENM=2;NM=1;NUMPARTS=2;SCTG=c_3_145995501_146020501_107C;SPAN=151;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:42:34.4:34.4,0,70.7:14:0:-34.41:35.12\n3\t146015560\t194390:2\tT\tT[3:146015409[\t34\tPASS\tEVDNC=ASSMB;HOMSEQ=CCT;MAPQ=60;MATEID=194390:1;MATENM=1;NM=2;NUMPARTS=2;SCTG=c_3_145995501_146020501_107C;SPAN=151;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:42:34.4:34.4,0,70.7:14:0:-34.41:35.12\n3\t146088175\t203693:1\tC\t]3:172347176]C\t25\tPASS\tEVDNC=ASSMB;HOMSEQ=CAGT;MAPQ=60;MATEID=203693:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_172333001_172358001_99C;SPAN=26259001;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:27:25.4:25.4,0,41.9:10:0:-25.42:25.66\n3\t146667403\t194657:1\tA\tA[3:146677075[\t65\tPASS\tEVDNC=ASSMB;HOMSEQ=CA;MAPQ=60;MATEID=194657:2;MATENM=3;NM=3;NUMPARTS=2;SCTG=c_3_146657001_146682001_118C;SPAN=9672;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:23:36:23:65.9,0,23:23:0:-66.82:66.82\n3\t146672618\t194660:1\tA\t]3:146677378]A\t99\tPASS\tEVDNC=ASSMB;INSERTION=ATTGGGGAG;MAPQ=60;MATEID=194660:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_146657001_146682001_45C;SPAN=4760;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:34:29:9.3:102.3,9.3,0:34:0:-102.3:102.3\n3\t146677075\t194657:2\tC\t]3:146667403]C\t65\tPASS\tEVDNC=ASSMB;HOMSEQ=CA;MAPQ=60;MATEID=194657:1;MATENM=3;NM=3;NUMPARTS=2;SCTG=c_3_146657001_146682001_118C;SPAN=9672;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:23:36:23:65.9,0,23:23:0:-66.82:66.82\n3\t146677378\t194660:2\tA\tA[3:146672618[\t99\tPASS\tEVDNC=ASSMB;INSERTION=ATTGGGGAG;MAPQ=60;MATEID=194660:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_146657001_146682001_45C;SPAN=4760;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:34:29:9.3:102.3,9.3,0:34:0:-102.3:102.3\n3\t148563653\t195155:1\tG\tG[3:148567640[\t99\tPASS\tEVDNC=ASSMB;INSERTION=A;MAPQ=60;MATEID=195155:2;MATENM=6;NM=3;NUMPARTS=2;SCTG=c_3_148543501_148568501_31C;SPAN=3987;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:43:25:12:132,12,0:43:0:-132:132\n3\t148567640\t195155:2\tA\t]3:148563653]A\t99\tPASS\tEVDNC=ASSMB;INSERTION=A;MAPQ=60;MATEID=195155:1;MATENM=3;NM=6;NUMPARTS=2;SCTG=c_3_148543501_148568501_31C;SPAN=3987;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:43:25:12:132,12,0:43:0:-132:132\n3\t148761366\t195224:1\tC\tC]3:148781756]\t82\tPASS\tDISC_MAPQ=48;EVDNC=DSCRD;IMPRECISE;MAPQ=48;MATEID=195224:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=3:148761366(+)-3:148781756(+)__3_148739501_148764501D;SPAN=20390;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:27:10:7.5:82.5,7.5,0:0:27:-82.52:82.52\n3\t148761604\t195225:1\tA\t[3:148781404[A\t35\tPASS\tDISC_MAPQ=41;EVDNC=DSCRD;IMPRECISE;MAPQ=41;MATEID=195225:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=3:148761604(-)-3:148781404(-)__3_148739501_148764501D;SPAN=19800;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:17:5.3:35,0,5.3:0:12:-35.78:35.78\n3\t148781404\t195225:2\tT\t[3:148761604[T\t35\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=195225:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=3:148761604(-)-3:148781404(-)__3_148739501_148764501D;SPAN=19800;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:17:5.3:35,0,5.3:0:12:-35.78:35.78\n3\t148781756\t195224:2\tA\tA]3:148761366]\t82\tPASS\tDISC_MAPQ=46;EVDNC=DSCRD;IMPRECISE;MAPQ=46;MATEID=195224:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=3:148761366(+)-3:148781756(+)__3_148739501_148764501D;SPAN=20390;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:27:10:7.5:82.5,7.5,0:0:27:-82.52:82.52\n3\t148849015\t195256:1\tT\tT[3:148849324[\t99\tPASS\tEVDNC=ASSMB;HOMSEQ=AGACCTCTTT;MAPQ=60;MATEID=195256:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_3_148837501_148862501_66C;SPAN=309;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:36:22:9.9:108.9,9.9,0:36:0:-108.9:108.9\n3\t148849324\t195256:2\tA\t]3:148849015]A\t99\tPASS\tEVDNC=ASSMB;HOMSEQ=AGACCTCTTT;MAPQ=60;MATEID=195256:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_3_148837501_148862501_66C;SPAN=309;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:36:22:9.9:108.9,9.9,0:36:0:-108.9:108.9\n3\t149126599\t195347:1\tA\tA[3:149126914[\t27\tPASS\tEVDNC=ASSMB;HOMSEQ=AAGATGCAAAAATA;MAPQ=60;MATEID=195347:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_149107001_149132001_114C;SPAN=315;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:32:27.5:27.5,0,50.6:11:0:-27.32:27.77\n3\t149126914\t195347:2\tA\t]3:149126599]A\t27\tPASS\tEVDNC=ASSMB;HOMSEQ=AAGATGCAAAAATA;MAPQ=60;MATEID=195347:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_149107001_149132001_114C;SPAN=315;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:32:27.5:27.5,0,50.6:11:0:-27.32:27.77\n3\t149550689\t195535:1\tA\tA[3:149552360[\t85\tPASS\tEVDNC=ASSMB;HOMSEQ=AGGGA;MAPQ=60;MATEID=195535:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_149548001_149573001_52C;SPAN=1671;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:27:28:7.8:85.8,7.8,0:27:0:-85.82:85.82\n3\t149552360\t195535:2\tA\t]3:149550689]A\t85\tPASS\tEVDNC=ASSMB;HOMSEQ=AGGGA;MAPQ=60;MATEID=195535:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_149548001_149573001_52C;SPAN=1671;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:27:28:7.8:85.8,7.8,0:27:0:-85.82:85.82\n3\t152031061\t205410:1\tG\tG]3:176727181]\t89\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TG;MAPQ=60;MATEID=205410:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_3_176718501_176743501_72C;SPAN=24696120;SUBN=3;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:29:22:8.1:89.1,8.1,0:23:11:-89.12:89.12\n3\t152593949\t196598:1\tT\tT[3:152595367[\t99\tPASS\tEVDNC=ASSMB;HOMSEQ=AAGAGGTCACTGTTT;MAPQ=60;MATEID=196598:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_152586001_152611001_23C;SPAN=1418;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:38:44:2.4:115.5,2.4,0:38:0:-120.7:120.7\n3\t152595367\t196598:2\tA\t]3:152593949]A\t99\tPASS\tEVDNC=ASSMB;HOMSEQ=AAGAGGTCACTGTTT;MAPQ=60;MATEID=196598:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_152586001_152611001_23C;SPAN=1418;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:38:44:2.4:115.5,2.4,0:38:0:-120.7:120.7\n3\t152899403\t196720:1\tT\tT[3:152899593[\t5\tPASS\tEVDNC=ASSMB;INSERTION=AGCTAGGTA;MAPQ=60;MATEID=196720:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_152880001_152905001_13C;SPAN=190;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:5:38:5.9:5.9,0,88.4:5:0:-5.824:10.24\n3\t152899593\t196720:2\tT\t]3:152899403]T\t5\tPASS\tEVDNC=ASSMB;INSERTION=AGCTAGGTA;MAPQ=60;MATEID=196720:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_152880001_152905001_13C;SPAN=190;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:5:38:5.9:5.9,0,88.4:5:0:-5.824:10.24\n3\t155693184\t197706:1\tT\tT[3:155693494[\t99\tPASS\tEVDNC=ASSMB;HOMSEQ=AAGAAAGCACAGACTT;MAPQ=60;MATEID=197706:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_3_155673001_155698001_87C;SPAN=310;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:34:23:9.3:102.3,9.3,0:34:0:-102.3:102.3\n3\t155693494\t197706:2\tA\t]3:155693184]A\t99\tPASS\tEVDNC=ASSMB;HOMSEQ=AAGAAAGCACAGACTT;MAPQ=60;MATEID=197706:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_3_155673001_155698001_87C;SPAN=310;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:34:23:9.3:102.3,9.3,0:34:0:-102.3:102.3\n3\t158399128\t198545:1\tT\tT[3:158399456[\t9\tPASS\tEVDNC=ASSMB;HOMSEQ=CTATTATTTCCTTTTT;MAPQ=60;MATEID=198545:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_158392501_158417501_63C;SPAN=328;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:16:156:9.1:9.1,0,382.1:16:0:-8.966:30.94\n3\t158399456\t198545:2\tC\t]3:158399128]C\t9\tPASS\tEVDNC=ASSMB;HOMSEQ=CTATTATTTCCTTTTT;MAPQ=60;MATEID=198545:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_158392501_158417501_63C;SPAN=328;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:16:156:9.1:9.1,0,382.1:16:0:-8.966:30.94\n3\t158632951\t198663:1\tC\tC[3:158634123[\t20\tPASS\tEVDNC=ASSMB;HOMSEQ=C;MAPQ=60;MATEID=198663:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_158613001_158638001_13C;SPAN=1172;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:43:20.9:20.9,0,86.9:10:0:-20.92:23.23\n3\t158634123\t198663:2\tC\t]3:158632951]C\t20\tPASS\tEVDNC=ASSMB;HOMSEQ=C;MAPQ=60;MATEID=198663:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_158613001_158638001_13C;SPAN=1172;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:43:20.9:20.9,0,86.9:10:0:-20.92:23.23\n3\t158729656\t198943:1\tC\t]3:159791445]C\t47\tPASS\tDISC_MAPQ=52;EVDNC=ASDIS;HOMSEQ=CT;MAPQ=60;MATEID=198943:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_159789001_159814001_25C;SPAN=1061789;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:17:33:33.8:47,0,33.8:13:10:-46.91:46.91\n3\t158733071\t198708:1\tC\t]3:158737844]C\t56\tPASS\tDISC_MAPQ=52;EVDNC=ASDIS;HOMSEQ=CA;MAPQ=60;MATEID=198708:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_158735501_158760501_49C;SPAN=4773;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:20:36:32.9:56,0,32.9:14:16:-56.16:56.16\n3\t158737844\t198708:2\tA\tA[3:158733071[\t56\tPASS\tDISC_MAPQ=56;EVDNC=ASDIS;HOMSEQ=CA;MAPQ=60;MATEID=198708:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_158735501_158760501_49C;SPAN=4773;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:20:36:32.9:56,0,32.9:14:16:-56.16:56.16\n3\t159306188\t198837:1\tT\t]3:159306326]T\t43\tPASS\tEVDNC=ASSMB;HOMSEQ=TAATAAC;MAPQ=60;MATEID=198837:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_3_159299001_159324001_42C;SPAN=138;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:19:68:43.7:43.7,0,126.2:19:0:-43.61:45.9\n3\t159306326\t198837:2\tC\tC[3:159306188[\t43\tPASS\tEVDNC=ASSMB;HOMSEQ=TAATAAC;MAPQ=60;MATEID=198837:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_3_159299001_159324001_42C;SPAN=138;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:19:68:43.7:43.7,0,126.2:19:0:-43.61:45.9\n3\t159791445\t198943:2\tT\tT[3:158729656[\t47\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=CT;MAPQ=60;MATEID=198943:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_159789001_159814001_25C;SPAN=1061789;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:17:33:33.8:47,0,33.8:13:10:-46.91:46.91\n3\t161025129\t199594:1\tT\t]3:161713703]T\t55\tPASS\tEVDNC=ASSMB;HOMSEQ=TTA;MAPQ=60;MATEID=199594:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_161700001_161725001_21C;SPAN=688574;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:20:37:35.9:55.7,0,35.9:20:0:-55.81:55.81\n3\t161528940\t199540:1\tT\tT[3:161529260[\t99\tPASS\tEVDNC=ASSMB;HOMSEQ=AGAATGTGTCATTCCT;MAPQ=60;MATEID=199540:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_161528501_161553501_66C;SPAN=320;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:42:36:11.7:128.7,11.7,0:42:0:-128.7:128.7\n3\t161529260\t199540:2\tA\t]3:161528940]A\t99\tPASS\tEVDNC=ASSMB;HOMSEQ=AGAATGTGTCATTCCT;MAPQ=60;MATEID=199540:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_161528501_161553501_66C;SPAN=320;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:42:36:11.7:128.7,11.7,0:42:0:-128.7:128.7\n3\t161569425\t199605:1\tC\t]3:161742789]C\t24\tPASS\tEVDNC=ASSMB;INSERTION=CCTCA;MAPQ=60;MATEID=199605:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_3_161724501_161749501_109C;SPAN=173364;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:19:21.2:24.5,0,21.2:9:0:-24.37:24.37\n3\t161713703\t199594:2\tA\tA[3:161025129[\t55\tPASS\tEVDNC=ASSMB;HOMSEQ=TTA;MAPQ=60;MATEID=199594:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_161700001_161725001_21C;SPAN=688574;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:20:37:35.9:55.7,0,35.9:20:0:-55.81:55.81\n3\t161742789\t199605:2\tA\tA[3:161569425[\t24\tPASS\tEVDNC=ASSMB;INSERTION=CCTCA;MAPQ=60;MATEID=199605:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_3_161724501_161749501_109C;SPAN=173364;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:19:21.2:24.5,0,21.2:9:0:-24.37:24.37\n3\t162690522\t200063:1\tT\tT[3:162690825[\t17\tPASS\tEVDNC=ASSMB;HOMSEQ=TATGTTTCTGTTTT;MAPQ=60;MATEID=200063:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_3_162680001_162705001_149C;SPAN=303;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:30:17.9:17.9,0,57.5:8:0:-17.98:19.13\n3\t162690825\t200063:2\tT\t]3:162690522]T\t17\tPASS\tEVDNC=ASSMB;HOMSEQ=TATGTTTCTGTTTT;MAPQ=60;MATEID=200063:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_3_162680001_162705001_149C;SPAN=303;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:30:17.9:17.9,0,57.5:8:0:-17.98:19.13\n3\t162827575\t200142:1\tG\t[3:162829871[G\t29\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;INSERTION=C;MAPQ=60;MATEID=200142:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_162827001_162852001_35C;SPAN=2296;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:35:29.9:29.9,0,56.3:9:7:-29.77:30.28\n3\t162829871\t200142:2\tA\t[3:162827575[A\t29\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;INSERTION=C;MAPQ=60;MATEID=200142:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_162827001_162852001_35C;SPAN=2296;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:35:29.9:29.9,0,56.3:9:7:-29.77:30.28\n3\t163047113\t200254:1\tT\tT[3:163051297[\t34\tPASS\tEVDNC=ASSMB;INSERTION=GT;MAPQ=60;MATEID=200254:2;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_3_163047501_163072501_40C;SPAN=4184;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:20:14.3:34.1,0,14.3:12:0:-34.32:34.32\n3\t163051297\t200254:2\tA\t]3:163047113]A\t34\tPASS\tEVDNC=ASSMB;INSERTION=GT;MAPQ=60;MATEID=200254:1;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_3_163047501_163072501_40C;SPAN=4184;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:20:14.3:34.1,0,14.3:12:0:-34.32:34.32\n3\t163386382\t200395:1\tG\tG[Un_KN707713v1_decoy:1[\t99\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=200395:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_163366001_163391001_33C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:37:26:10.2:112.2,10.2,0:37:0:-112.2:112.2\n3\t163386382\t988285:1\tG\tG[Un_KN707713v1_decoy:1[\t99\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=988285:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_564_1_1308_4C;SPAN=-1;SUBN=1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:35:11:9.6:105.6,9.6,0:35:0:-105.6:105.6\n3\t165861102\t283092:1\tG\t]5:26230726]G\t39\tPASS\tDISC_MAPQ=22;EVDNC=DSCRD;IMPRECISE;MAPQ=22;MATEID=283092:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=3:165861102(-)-5:26230726(+)__5_26215001_26240001D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:13:12:3.6:39.6,3.6,0:0:13:-39.61:39.61\n3\t166722402\t201766:1\tC\t[5:51925610[C\t57\tPASS\tDISC_MAPQ=27;EVDNC=DSCRD;IMPRECISE;MAPQ=27;MATEID=201766:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=3:166722402(-)-5:51925610(-)__3_166698001_166723001D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:20:31:17.9:57.5,0,17.9:0:20:-58.24:58.24\n3\t170401792\t203025:1\tA\tA[3:170402090[\t99\tPASS\tDISC_MAPQ=59;EVDNC=ASDIS;HOMSEQ=AAAAAACTAAATAATA;MAPQ=60;MATEID=203025:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_3_170397501_170422501_40C;SPAN=298;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:67:25:18.6:204.6,18.6,0:46:26:-204.7:204.7\n3\t170402090\t203025:2\tA\t]3:170401792]A\t99\tPASS\tDISC_MAPQ=58;EVDNC=ASDIS;HOMSEQ=AAAAAACTAAATAATA;MAPQ=60;MATEID=203025:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_3_170397501_170422501_40C;SPAN=298;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:67:25:18.6:204.6,18.6,0:46:26:-204.7:204.7\n3\t172347176\t203693:2\tT\tT[3:146088175[\t25\tPASS\tEVDNC=ASSMB;HOMSEQ=CAGT;MAPQ=60;MATEID=203693:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_172333001_172358001_99C;SPAN=26259001;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:27:25.4:25.4,0,41.9:10:0:-25.42:25.66\n3\t174952168\t204975:1\tC\t]3:175621829]C\t70\tPASS\tEVDNC=ASSMB;INSERTION=TG;MAPQ=60;MATEID=204975:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_175616001_175641001_58C;SPAN=669661;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:24:31:4.7:70.7,0,4.7:24:0:-73.47:73.47\n3\t175307660\t204822:1\tC\tC[3:175421297[\t31\tPASS\tEVDNC=ASSMB;HOMSEQ=CAGC;MAPQ=60;MATEID=204822:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_175420001_175445001_37C;SPAN=113637;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:41:31.4:31.4,0,71:13:0:-31.39:32.26\n3\t175421297\t204822:2\tC\t]3:175307660]C\t31\tPASS\tEVDNC=ASSMB;HOMSEQ=CAGC;MAPQ=60;MATEID=204822:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_175420001_175445001_37C;SPAN=113637;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:41:31.4:31.4,0,71:13:0:-31.39:32.26\n3\t175448963\t204886:1\tG\tG[3:175512033[\t17\tPASS\tEVDNC=ASSMB;HOMSEQ=TG;MAPQ=60;MATEID=204886:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_175493501_175518501_16C;SPAN=63070;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:34:17:17,0,66.5:8:0:-16.85:18.63\n3\t175512033\t204886:2\tT\t]3:175448963]T\t17\tPASS\tEVDNC=ASSMB;HOMSEQ=TG;MAPQ=60;MATEID=204886:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_175493501_175518501_16C;SPAN=63070;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:34:17:17,0,66.5:8:0:-16.85:18.63\n3\t175621829\t204975:2\tC\tC[3:174952168[\t70\tPASS\tEVDNC=ASSMB;INSERTION=TG;MAPQ=60;MATEID=204975:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_175616001_175641001_58C;SPAN=669661;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:24:31:4.7:70.7,0,4.7:24:0:-73.47:73.47\n3\t176102403\t205151:1\tG\t]3:176102572]G\t34\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=205151:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_3_176081501_176106501_72C;SPAN=169;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:15:55:34.1:34.1,0,103.4:15:0:-34.06:36.05\n3\t176102572\t205151:2\tC\tC[3:176102403[\t34\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=205151:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_3_176081501_176106501_72C;SPAN=169;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:15:55:34.1:34.1,0,103.4:15:0:-34.06:36.05\n3\t176189690\t916262:1\tC\t]22:28669436]C\t6\tPASS\tEVDNC=ASSMB;HOMSEQ=CAGTT;MAPQ=60;MATEID=916262:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_22_28665001_28690001_73C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:105:6.8:6.8,0,257.6:11:0:-6.796:21.38\n3\t176434607\t205326:1\tA\t]3:176444476]A\t99\tPASS\tEVDNC=ASSMB;HOMSEQ=A;MAPQ=60;MATEID=205326:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_176424501_176449501_53C;SPAN=9869;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:34:46:13.7:99.5,0,13.7:34:0:-102.7:102.7\n3\t176444476\t205326:2\tA\tA[3:176434607[\t99\tPASS\tEVDNC=ASSMB;HOMSEQ=A;MAPQ=60;MATEID=205326:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_176424501_176449501_53C;SPAN=9869;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:34:46:13.7:99.5,0,13.7:34:0:-102.7:102.7\n3\t176727181\t205410:2\tA\tA]3:152031061]\t89\tPASS\tDISC_MAPQ=9;EVDNC=ASDIS;HOMSEQ=TG;MAPQ=38;MATEID=205410:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_3_176718501_176743501_72C;SPAN=24696120;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:29:22:8.1:89.1,8.1,0:23:11:-89.12:89.12\n3\t177122919\t371708:1\tC\tC[6:153202309[\t92\tPASS\tDISC_MAPQ=59;EVDNC=DSCRD;IMPRECISE;MAPQ=59;MATEID=371708:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=3:177122919(+)-6:153202309(-)__6_153198501_153223501D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:31:6:8.4:92.4,8.4,0:0:31:-92.42:92.42\n3\t177126512\t371709:1\tT\tT[6:153202067[\t69\tPASS\tDISC_MAPQ=255;EVDNC=TSI_L;HOMSEQ=ATC;INSERTION=T;MAPQ=60;MATEID=371709:2;MATENM=1;NM=0;NUMPARTS=3;SCTG=c_6_153198501_153223501_16C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:23:18:6.3:69.3,6.3,0:23:0:-69.32:69.32\n3\t178832345\t206192:1\tC\tC[3:178833084[\t95\tPASS\tEVDNC=ASSMB;HOMSEQ=GCC;MAPQ=60;MATEID=206192:2;MATENM=2;NM=2;NUMPARTS=2;SCTG=c_3_178825501_178850501_51C;SPAN=739;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:32:15:8.7:95.7,8.7,0:32:0:-95.72:95.72\n3\t178833084\t206192:2\tG\t]3:178832345]G\t95\tPASS\tEVDNC=ASSMB;HOMSEQ=GCC;MAPQ=60;MATEID=206192:1;MATENM=2;NM=2;NUMPARTS=2;SCTG=c_3_178825501_178850501_51C;SPAN=739;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:32:15:8.7:95.7,8.7,0:32:0:-95.72:95.72\n3\t178849865\t206201:1\tA\tA[3:178850556[\t79\tPASS\tEVDNC=ASSMB;HOMSEQ=A;MAPQ=60;MATEID=206201:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_3_178850001_178875001_90C;SPAN=691;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:26:18:7.2:79.2,7.2,0:26:0:-79.22:79.22\n3\t178850556\t206201:2\tA\t]3:178849865]A\t79\tPASS\tEVDNC=ASSMB;HOMSEQ=A;MAPQ=60;MATEID=206201:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_3_178850001_178875001_90C;SPAN=691;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:26:18:7.2:79.2,7.2,0:26:0:-79.22:79.22\n3\t178965525\t206219:1\tA\tA[3:178965814[\t25\tPASS\tEVDNC=ASSMB;HOMSEQ=A;MAPQ=60;MATEID=206219:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_178948001_178973001_1C;SPAN=289;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:40:25.1:25.1,0,74.6:11:0:-25.07:26.48\n3\t178965814\t206219:2\tA\t]3:178965525]A\t25\tPASS\tEVDNC=ASSMB;HOMSEQ=A;MAPQ=60;MATEID=206219:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_178948001_178973001_1C;SPAN=289;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:40:25.1:25.1,0,74.6:11:0:-25.07:26.48\n3\t179936553\t206454:1\tC\tC[3:179937017[\t82\tPASS\tEVDNC=ASSMB;HOMSEQ=TC;MAPQ=60;MATEID=206454:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_179928001_179953001_81C;SPAN=464;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:27:27:7.5:82.5,7.5,0:27:0:-82.52:82.52\n3\t179937017\t206454:2\tT\t]3:179936553]T\t82\tPASS\tEVDNC=ASSMB;HOMSEQ=TC;MAPQ=60;MATEID=206454:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_179928001_179953001_81C;SPAN=464;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:27:27:7.5:82.5,7.5,0:27:0:-82.52:82.52\n3\t182153134\t207028:1\tC\t]3:182153263]C\t94\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=207028:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_182133001_182158001_26C;SPAN=129;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:34:65:67.7:94.1,0,67.7:34:0:-94.15:94.15\n3\t182153263\t207028:2\tA\tA[3:182153134[\t94\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=207028:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_182133001_182158001_26C;SPAN=129;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:34:65:67.7:94.1,0,67.7:34:0:-94.15:94.15\n3\t182830325\t207207:1\tA\t]3:182975990]A\t30\tPASS\tDISC_MAPQ=50;EVDNC=ASDIS;HOMSEQ=AAA;MAPQ=60;MATEID=207207:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_182966001_182991001_41C;SPAN=145665;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:20:17.6:30.8,0,17.6:7:10:-30.82:30.82\n3\t182975990\t207207:2\tA\tA[3:182830325[\t30\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AAA;MAPQ=60;MATEID=207207:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_182966001_182991001_41C;SPAN=145665;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:20:17.6:30.8,0,17.6:7:10:-30.82:30.82\n3\t183712226\t560853:1\tT\tT[10:94531640[\t23\tPASS\tEVDNC=ASSMB;HOMSEQ=TTATTTTATTTTATTTTATTTTATTTTATTTT;MAPQ=60;MATEID=560853:2;MATENM=1;NM=0;NUMPARTS=3;SCTG=c_10_94521001_94546001_53C;SECONDARY;SPAN=-1;SUBN=4;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:21:23.9:23.9,0,27.2:9:0:-23.81:23.84\n3\t184159056\t207741:1\tG\tG[3:184159616[\t41\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=GGCCTCCCAAAGTGCTGGGATTACAGGTG;MAPQ=60;MATEID=207741:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_3_184142001_184167001_71C;SPAN=560;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:15:28:28.4:41.6,0,28.4:11:8:-41.77:41.77\n3\t184159616\t207741:2\tG\t]3:184159056]G\t41\tPASS\tDISC_MAPQ=52;EVDNC=ASDIS;HOMSEQ=GGCCTCCCAAAGTGCTGGGATTACAGGTG;MAPQ=60;MATEID=207741:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_3_184142001_184167001_71C;SPAN=560;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:15:28:28.4:41.6,0,28.4:11:8:-41.77:41.77\n3\t185432358\t110651:2\tT\t]2:128082406]T\t66\tPASS\tDISC_MAPQ=3;EVDNC=ASDIS;HOMSEQ=TTTTTGTGTTTTTAGTAGAGACAGGGTTTCAC;MAPQ=33;MATEID=110651:1;MATENM=6;NM=2;NUMPARTS=2;SCTG=c_2_128061501_128086501_81C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:22:13:6:66,6,0:18:9:-66.02:66.02\n3\t185794263\t208397:1\tG\tG[3:185794490[\t35\tPASS\tEVDNC=ASSMB;INSERTION=GGGATCACAGAGC;MAPQ=60;MATEID=208397:2;MATENM=4;NM=0;NUMPARTS=2;SCTG=c_3_185783501_185808501_121C;SPAN=227;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:26:29:35.6,0,29:13:0:-35.63:35.63\n3\t185794490\t208397:2\tC\t]3:185794263]C\t35\tPASS\tEVDNC=ASSMB;INSERTION=GGGATCACAGAGC;MAPQ=60;MATEID=208397:1;MATENM=0;NM=4;NUMPARTS=2;SCTG=c_3_185783501_185808501_121C;SPAN=227;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:26:29:35.6,0,29:13:0:-35.63:35.63\n3\t186858374\t482537:1\tT\t[8:143618862[T\t52\tPASS\tDISC_MAPQ=53;EVDNC=ASDIS;HOMSEQ=TA;MAPQ=60;MATEID=482537:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_143619001_143644001_92C;SPAN=-1;SUBN=3;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:18:1:4.8:52.8,4.8,0:13:9:-52.81:52.81\n3\t186863244\t208824:1\tG\tG[3:186867496[\t86\tPASS\tEVDNC=ASSMB;HOMSEQ=GAAAAATATTGCAAATAG;MAPQ=60;MATEID=208824:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_3_186861501_186886501_57C;SPAN=4252;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:31:56:53.6:86.6,0,53.6:31:0:-86.98:86.98\n3\t186867496\t208824:2\tG\t]3:186863244]G\t86\tPASS\tEVDNC=ASSMB;HOMSEQ=GAAAAATATTGCAAATAG;MAPQ=60;MATEID=208824:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_3_186861501_186886501_57C;SPAN=4252;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:31:56:53.6:86.6,0,53.6:31:0:-86.98:86.98\n3\t187108877\t208922:1\tT\tT[3:187109182[\t89\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AAAATTTGTT;MAPQ=60;MATEID=208922:2;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_3_187106501_187131501_36C;SPAN=305;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:29:25:8.1:89.1,8.1,0:23:6:-89.12:89.12\n3\t187109182\t208922:2\tA\t]3:187108877]A\t89\tPASS\tDISC_MAPQ=59;EVDNC=ASDIS;HOMSEQ=AAAATTTGTT;MAPQ=60;MATEID=208922:1;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_3_187106501_187131501_36C;SPAN=305;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:29:25:8.1:89.1,8.1,0:23:6:-89.12:89.12\n3\t188357984\t209436:1\tA\t]3:188394904]A\t29\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=209436:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_188380501_188405501_6C;SPAN=36920;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:26:29:29,0,35.6:11:0:-29:29.05\n3\t188394904\t209436:2\tT\tT[3:188357984[\t29\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=209436:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_188380501_188405501_6C;SPAN=36920;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:26:29:29,0,35.6:11:0:-29:29.05\n3\t190019559\t210058:1\tA\tA[3:190022736[\t66\tPASS\tEVDNC=ASSMB;HOMSEQ=CTCA;MAPQ=60;MATEID=210058:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_190022001_190047001_21C;SPAN=3177;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:22:14:6:66,6,0:22:0:-66.02:66.02\n3\t190022736\t210058:2\tC\t]3:190019559]C\t66\tPASS\tEVDNC=ASSMB;HOMSEQ=CTCA;MAPQ=60;MATEID=210058:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_190022001_190047001_21C;SPAN=3177;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:22:14:6:66,6,0:22:0:-66.02:66.02\n3\t190237631\t210179:1\tT\tT[3:190237921[\t48\tPASS\tEVDNC=ASSMB;HOMSEQ=CCTGTGTTTTTT;MAPQ=60;MATEID=210179:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_190218001_190243001_78C;SPAN=290;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:17:28:21.8:48.2,0,21.8:17:0:-48.77:48.77\n3\t190237921\t210179:2\tC\t]3:190237631]C\t48\tPASS\tEVDNC=ASSMB;HOMSEQ=CCTGTGTTTTTT;MAPQ=60;MATEID=210179:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_190218001_190243001_78C;SPAN=290;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:17:28:21.8:48.2,0,21.8:17:0:-48.77:48.77\n3\t190572861\t210321:1\tT\tT[3:190573148[\t38\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AATGCTTTGTT;MAPQ=60;MATEID=210321:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_3_190561001_190586001_38C;SPAN=287;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:18:5:38,0,5:7:7:-39.01:39.01\n3\t190573148\t210321:2\tA\t]3:190572861]A\t38\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AATGCTTTGTT;MAPQ=60;MATEID=210321:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_3_190561001_190586001_38C;SPAN=287;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:18:5:38,0,5:7:7:-39.01:39.01\n3\t190952018\t210426:1\tA\tA[3:190952332[\t85\tPASS\tEVDNC=ASSMB;HOMSEQ=AAAGAGTGTA;MAPQ=60;MATEID=210426:2;MATENM=5;NM=0;NUMPARTS=2;SCTG=c_3_190928501_190953501_0C;SPAN=314;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:26:28:7.8:85.8,7.8,0:26:0:-85.43:85.43\n3\t190952332\t210426:2\tA\t]3:190952018]A\t85\tPASS\tEVDNC=ASSMB;HOMSEQ=AAAGAGTGTA;MAPQ=60;MATEID=210426:1;MATENM=0;NM=5;NUMPARTS=2;SCTG=c_3_190928501_190953501_0C;SPAN=314;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:26:28:7.8:85.8,7.8,0:26:0:-85.43:85.43\n3\t190978865\t210444:1\tC\tC[3:190979149[\t43\tPASS\tEVDNC=ASSMB;HOMSEQ=ATATAAATTACCC;MAPQ=60;MATEID=210444:2;MATENM=2;NM=1;NUMPARTS=2;SCTG=c_3_190977501_191002501_1C;SPAN=284;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:15:21:7.4:43.7,0,7.4:15:0:-44.87:44.87\n3\t190979149\t210444:2\tA\t]3:190978865]A\t43\tPASS\tEVDNC=ASSMB;HOMSEQ=ATATAAATTACCC;MAPQ=60;MATEID=210444:1;MATENM=1;NM=2;NUMPARTS=2;SCTG=c_3_190977501_191002501_1C;SPAN=284;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:15:21:7.4:43.7,0,7.4:15:0:-44.87:44.87\n3\t192345405\t211008:1\tA\tA[3:192345703[\t85\tPASS\tEVDNC=ASSMB;HOMSEQ=AAGATATAACATA;MAPQ=60;MATEID=211008:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_192325001_192350001_16C;SPAN=298;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:27:28:7.8:85.8,7.8,0:27:0:-85.82:85.82\n3\t192345703\t211008:2\tA\t]3:192345405]A\t85\tPASS\tEVDNC=ASSMB;HOMSEQ=AAGATATAACATA;MAPQ=60;MATEID=211008:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_192325001_192350001_16C;SPAN=298;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:27:28:7.8:85.8,7.8,0:27:0:-85.82:85.82\n3\t193059075\t211257:1\tT\tT[3:193064810[\t49\tPASS\tEVDNC=ASSMB;HOMSEQ=TTTGT;MAPQ=60;MATEID=211257:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_193060001_193085001_76C;SPAN=5735;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:17:16:4.5:49.5,4.5,0:17:0:-49.51:49.51\n3\t193064810\t211257:2\tT\t]3:193059075]T\t49\tPASS\tEVDNC=ASSMB;HOMSEQ=TTTGT;MAPQ=60;MATEID=211257:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_193060001_193085001_76C;SPAN=5735;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:17:16:4.5:49.5,4.5,0:17:0:-49.51:49.51\n3\t193473457\t211437:1\tT\t]3:193543259]T\t69\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=211437:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_193525501_193550501_36C;SPAN=69802;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:21:23:6.3:69.3,6.3,0:21:0:-68.32:68.32\n3\t193543259\t211437:2\tT\tT[3:193473457[\t69\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=211437:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_193525501_193550501_36C;SPAN=69802;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:21:23:6.3:69.3,6.3,0:21:0:-68.32:68.32\n3\t194569581\t211821:1\tC\tC[3:194569800[\t16\tPASS\tEVDNC=ASSMB;HOMSEQ=CAGGAATTCGAGACCAGCCTGACCAAC;MAPQ=60;MATEID=211821:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_194554501_194579501_37C;SPAN=219;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:7:24:16.4:16.4,0,42.8:7:0:-16.36:17.07\n3\t194569800\t211821:2\tC\t]3:194569581]C\t16\tPASS\tEVDNC=ASSMB;HOMSEQ=CAGGAATTCGAGACCAGCCTGACCAAC;MAPQ=60;MATEID=211821:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_194554501_194579501_37C;SPAN=219;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:7:24:16.4:16.4,0,42.8:7:0:-16.36:17.07\n3\t194663426\t211869:1\tC\tC[3:194663749[\t67\tPASS\tDISC_MAPQ=58;EVDNC=ASDIS;HOMSEQ=CCTTTCCCTTCTTCCGCCTCAGAGAAAGCCTTTCCCTTCTTCTGCCTCAGAGAAAGCCTTTCCCTTCTTC;MAPQ=60;MATEID=211869:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_3_194652501_194677501_173C;SPAN=323;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:23:32:11:67.1,0,11:16:8:-68.92:68.92\n3\t194663749\t211869:2\tC\t]3:194663426]C\t67\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=CCTTTCCCTTCTTCCGCCTCAGAGAAAGCCTTTCCCTTCTTCTGCCTCAGAGAAAGCCTTTCCCTTCTTC;MAPQ=60;MATEID=211869:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_3_194652501_194677501_173C;SPAN=323;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:23:32:11:67.1,0,11:16:8:-68.92:68.92\n3\t194678016\t211879:1\tC\tC[3:194679562[\t29\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=211879:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=3:194678016(+)-3:194679562(-)__3_194677001_194702001D;SPAN=1546;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:24:29.6:29.6,0,29.6:0:11:-29.57:29.57\n3\t194679562\t211879:2\tA\t]3:194678016]A\t29\tPASS\tDISC_MAPQ=57;EVDNC=DSCRD;IMPRECISE;MAPQ=57;MATEID=211879:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=3:194678016(+)-3:194679562(-)__3_194677001_194702001D;SPAN=1546;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:24:29.6:29.6,0,29.6:0:11:-29.57:29.57\n3\t194822565\t211925:1\tG\tG[3:194825528[\t39\tPASS\tEVDNC=ASSMB;HOMSEQ=GGTG;MAPQ=60;MATEID=211925:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_194824001_194849001_168C;SPAN=2963;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:24:19.7:39.5,0,19.7:14:0:-39.77:39.77\n3\t194822581\t211927:1\tC\t]3:194825702]C\t50\tPASS\tEVDNC=ASSMB;HOMSEQ=CC;MAPQ=60;MATEID=211927:2;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_3_194824001_194849001_105C;SPAN=3121;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:17:22:3.8:50,0,3.8:17:0:-52.01:52.01\n3\t194825528\t211925:2\tG\t]3:194822565]G\t39\tPASS\tEVDNC=ASSMB;HOMSEQ=GGTG;MAPQ=60;MATEID=211925:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_194824001_194849001_168C;SPAN=2963;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:24:19.7:39.5,0,19.7:14:0:-39.77:39.77\n3\t194825702\t211927:2\tC\tC[3:194822581[\t50\tPASS\tEVDNC=ASSMB;HOMSEQ=CC;MAPQ=60;MATEID=211927:1;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_3_194824001_194849001_105C;SPAN=3121;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:17:22:3.8:50,0,3.8:17:0:-52.01:52.01\n3\t194894010\t211954:1\tT\tT[3:194894311[\t58\tPASS\tEVDNC=ASSMB;HOMSEQ=CTATGCGCTCTTTCTT;MAPQ=60;MATEID=211954:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_3_194873001_194898001_35C;SPAN=301;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:20:27:8.9:58.4,0,8.9:20:0:-60.44:60.44\n3\t194894311\t211954:2\tC\t]3:194894010]C\t58\tPASS\tEVDNC=ASSMB;HOMSEQ=CTATGCGCTCTTTCTT;MAPQ=60;MATEID=211954:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_3_194873001_194898001_35C;SPAN=301;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:20:27:8.9:58.4,0,8.9:20:0:-60.44:60.44\n3\t195886346\t883494:1\tC\t[20:48827701[C\t1\tPASS\tDISC_MAPQ=255;EVDNC=ASDIS;INSERTION=CTACTT;MAPQ=60;MATEID=883494:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_48804001_48829001_21C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:5:55:1.1:1.1,0,136.4:3:3:-1.045:9.394\n3\t196523895\t213005:1\tC\tC[3:196524559[\t21\tPASS\tEVDNC=ASSMB;HOMSEQ=C;MAPQ=60;MATEID=213005:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_196514501_196539501_24C;SPAN=664;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:66:21.2:21.2,0,143.3:12:0:-21.06:26.43\n3\t196524559\t213005:2\tC\t]3:196523895]C\t21\tPASS\tEVDNC=ASSMB;HOMSEQ=C;MAPQ=60;MATEID=213005:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_196514501_196539501_24C;SPAN=664;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:66:21.2:21.2,0,143.3:12:0:-21.06:26.43\n3\t196591623\t213057:1\tT\t[11:45377756[T\t99\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=CTCTGTCACCCAGGCTGGAGTGCAATGGCGCGATCTCGGCTCACTGCAA;MAPQ=60;MATEID=213057:2;MATENM=2;NM=1;NUMPARTS=2;SCTG=c_3_196588001_196613001_28C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:45:15:12.6:138.6,12.6,0:44:7:-138.6:138.6\n3\t196602062\t213065:1\tA\tA[3:196602380[\t0\tPASS\tEVDNC=ASSMB;HOMSEQ=GAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCA;MAPQ=60;MATEID=213065:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_3_196588001_196613001_4C;SPAN=318;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/0:5:70:3:0,3,181.5:5:0:3.171:8.849\n3\t196602380\t213065:2\tG\t]3:196602062]G\t0\tPASS\tEVDNC=ASSMB;HOMSEQ=GAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCA;MAPQ=60;MATEID=213065:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_3_196588001_196613001_4C;SPAN=318;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/0:5:70:3:0,3,181.5:5:0:3.171:8.849\n3\t197032518\t213254:1\tG\tG[3:197033039[\t39\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=CTCTTGCTGACTGGTTGGGG;MAPQ=60;MATEID=213254:2;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_3_197029001_197054001_99C;SPAN=521;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:15:37:39.2:39.2,0,52.4:8:7:-39.11:39.25\n3\t197033039\t213254:2\tC\t]3:197032518]C\t39\tPASS\tDISC_MAPQ=14;EVDNC=ASDIS;HOMSEQ=CTCTTGCTGACTGGTTGGGG;MAPQ=23;MATEID=213254:1;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_3_197029001_197054001_99C;SPAN=521;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:15:37:39.2:39.2,0,52.4:8:7:-39.11:39.25\n3\t197384100\t213329:1\tA\t]3:197384470]A\t99\tPASS\tDISC_MAPQ=53;EVDNC=ASDIS;INSERTION=TATCCGTAGTGTATTTGCGAG;MAPQ=60;MATEID=213329:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_197372001_197397001_24C;SPAN=370;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:46:104:99:122.6,0,139.1:43:8:-122.6:122.7\n3\t197384470\t213329:2\tC\tC[3:197384100[\t99\tPASS\tDISC_MAPQ=57;EVDNC=ASDIS;INSERTION=TATCCGTAGTGTATTTGCGAG;MAPQ=60;MATEID=213329:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_197372001_197397001_24C;SPAN=370;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:46:104:99:122.6,0,139.1:43:8:-122.6:122.7\n3\t197384611\t213342:1\tT\tT[3:197389970[\t67\tPASS\tDISC_MAPQ=255;EVDNC=TSI_L;HOMSEQ=GATAGTTTACTATCTGTAGTGCATTTGGGATAGT;INSERTION=GTCTGCACCACAT;MAPQ=60;MATEID=213342:2;MATENM=4;NM=7;NUMPARTS=15;SCTG=c_3_197372001_197397001_86C;SPAN=5359;SUBN=2;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:30:112:67.7:67.7,0,212.9:30:0:-67.55:71.82\n3\t197389970\t213342:2\tT\t]3:197384611]T\t67\tPASS\tDISC_MAPQ=255;EVDNC=TSI_L;HOMSEQ=GATAGTTTACTATCTGTAGTGCATTTGGGATAGT;INSERTION=GTCTGCACCACAT;MAPQ=60;MATEID=213342:1;MATENM=7;NM=4;NUMPARTS=15;SCTG=c_3_197372001_197397001_86C;SPAN=5359;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:30:112:67.7:67.7,0,212.9:30:0:-67.55:71.82\n3\t197390161\t213403:1\tT\t]3:197390694]T\t0\tPASS\tDISC_MAPQ=55;EVDNC=DSCRD;IMPRECISE;MAPQ=55;MATEID=213403:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=3:197390161(-)-3:197390694(+)__3_197372001_197397001D;SPAN=533;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/0:8:116:6:0,6,303.6:0:8:6.199:14.03\n3\t197390694\t213403:2\tA\tA[3:197390161[\t0\tPASS\tDISC_MAPQ=26;EVDNC=DSCRD;IMPRECISE;MAPQ=26;MATEID=213403:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=3:197390161(-)-3:197390694(+)__3_197372001_197397001D;SPAN=533;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/0:8:116:6:0,6,303.6:0:8:6.199:14.03\n3\t197391017\t213415:1\tT\tT[3:197391554[\t99\tPASS\tDISC_MAPQ=31;EVDNC=TSI_G;HOMSEQ=CATTTGGGATAGTTTGCTATCTGTAGCACATTTGGGATAGTTT;INSERTION=GCTATCTGTAGCACATTTGGGATAGTTTCCTA;MAPQ=20;MATEID=213415:2;MATENM=2;NM=0;NUMPARTS=4;SCTG=c_3_197372001_197397001_83C;SPAN=537;SUBN=3;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:47:152:99:112.7,0,267.8:42:8:-112.4:116\n3\t197391554\t213415:2\tT\t]3:197391017]T\t99\tPASS\tDISC_MAPQ=27;EVDNC=TSI_G;HOMSEQ=CATTTGGGATAGTTTGCTATCTGTAGCACATTTGGGATAGTTT;INSERTION=GCTATCTGTAGCACATTTGGGATAGTTTCCTA;MAPQ=31;MATEID=213415:1;MATENM=0;NM=2;NUMPARTS=4;SCTG=c_3_197372001_197397001_83C;SPAN=537;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:47:152:99:112.7,0,267.8:42:8:-112.4:116\n4\t127126\t213760:1\tA\tA[4:133267[\t23\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AA;MAPQ=60;MATEID=213760:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_4_122501_147501_96C;SPAN=6141;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:22:23.6:23.6,0,30.2:4:6:-23.53:23.59\n4\t133267\t213760:2\tA\t]4:127126]A\t23\tPASS\tDISC_MAPQ=55;EVDNC=ASDIS;HOMSEQ=AA;MAPQ=60;MATEID=213760:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_4_122501_147501_96C;SPAN=6141;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:22:23.6:23.6,0,30.2:4:6:-23.53:23.59\n4\t152957\t562623:1\tT\t[10:100092116[T\t36\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;INSERTION=C;MAPQ=60;MATEID=562623:2;MATENM=24;NM=0;NUMPARTS=2;SCTG=c_10_100082501_100107501_1C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:12:3:3.3:36.3,3.3,0:5:8:-36.31:36.31\n4\t270179\t213843:1\tC\tC[4:270450[\t62\tPASS\tEVDNC=ASSMB;HOMSEQ=AAGAATTCTCC;MAPQ=60;MATEID=213843:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_269501_294501_49C;SPAN=271;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:19:21:5.7:62.7,5.7,0:19:0:-61.54:61.54\n4\t270450\t213843:2\tA\t]4:270179]A\t62\tPASS\tEVDNC=ASSMB;HOMSEQ=AAGAATTCTCC;MAPQ=60;MATEID=213843:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_269501_294501_49C;SPAN=271;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:19:21:5.7:62.7,5.7,0:19:0:-61.54:61.54\n4\t407263\t213896:1\tG\tG[4:407581[\t15\tPASS\tEVDNC=ASSMB;HOMSEQ=AAGAATAAGGCGG;MAPQ=60;MATEID=213896:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_392001_417001_70C;SPAN=318;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:6:17:15.2:15.2,0,25.1:6:0:-15.03:15.24\n4\t407581\t213896:2\tA\t]4:407263]A\t15\tPASS\tEVDNC=ASSMB;HOMSEQ=AAGAATAAGGCGG;MAPQ=60;MATEID=213896:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_392001_417001_70C;SPAN=318;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:6:17:15.2:15.2,0,25.1:6:0:-15.03:15.24\n4\t2561244\t214587:1\tA\tA[4:2561536[\t4\tPASS\tEVDNC=ASSMB;HOMSEQ=GCCCAGGCTGGAGTGCAGTGGCGCA;MAPQ=60;MATEID=214587:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_2548001_2573001_13C;SPAN=292;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:4:32:4.4:4.4,0,73.7:4:0:-4.209:8.1\n4\t2561536\t214587:2\tG\t]4:2561244]G\t4\tPASS\tEVDNC=ASSMB;HOMSEQ=GCCCAGGCTGGAGTGCAGTGGCGCA;MAPQ=60;MATEID=214587:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_2548001_2573001_13C;SPAN=292;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:4:32:4.4:4.4,0,73.7:4:0:-4.209:8.1\n4\t3594169\t496905:1\tA\t[9:65437620[A\t23\tPASS\tDISC_MAPQ=53;EVDNC=DSCRD;IMPRECISE;MAPQ=53;MATEID=496905:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=4:3594169(-)-9:65437620(-)__9_65415001_65440001D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:8:7:2.1:23.1,2.1,0:0:8:-23.11:23.11\n4\t3814792\t214986:1\tT\t]4:3815327]T\t57\tPASS\tDISC_MAPQ=18;EVDNC=ASDIS;HOMSEQ=TATACCCACTCTATCAGGCTGTACT;MAPQ=60;MATEID=214986:2;MATENM=3;NM=91;NUMPARTS=2;SCTG=c_4_3797501_3822501_110C;SPAN=535;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:22:55:57.2:57.2,0,80.3:18:5:-57.16:57.39\n4\t3815327\t214986:2\tT\tT[4:3814792[\t57\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TATACCCACTCTATCAGGCTGTACT;MAPQ=60;MATEID=214986:1;MATENM=91;NM=3;NUMPARTS=2;SCTG=c_4_3797501_3822501_110C;SPAN=535;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:22:55:57.2:57.2,0,80.3:18:5:-57.16:57.39\n4\t4129499\t215168:1\tT\tT[4:4130496[\t24\tPASS\tDISC_MAPQ=45;EVDNC=DSCRD;IMPRECISE;MAPQ=45;MATEID=215168:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=4:4129499(+)-4:4130496(-)__4_4116001_4141001D;SPAN=997;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:18:18.2:24.8,0,18.2:0:9:-24.67:24.67\n4\t4130496\t215168:2\tA\t]4:4129499]A\t24\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=215168:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=4:4129499(+)-4:4130496(-)__4_4116001_4141001D;SPAN=997;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:18:18.2:24.8,0,18.2:0:9:-24.67:24.67\n4\t4164684\t215182:1\tT\t]4:4170704]T\t46\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=215182:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=4:4164684(-)-4:4170704(+)__4_4165001_4190001D;SPAN=6020;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:15:16:4.2:46.2,4.2,0:0:15:-46.21:46.21\n4\t4170704\t215182:2\tT\tT[4:4164684[\t46\tPASS\tDISC_MAPQ=54;EVDNC=DSCRD;IMPRECISE;MAPQ=54;MATEID=215182:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=4:4164684(-)-4:4170704(+)__4_4165001_4190001D;SPAN=6020;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:15:16:4.2:46.2,4.2,0:0:15:-46.21:46.21\n4\t4357811\t215279:1\tT\t]4:4357945]T\t30\tPASS\tEVDNC=ASSMB;HOMSEQ=TC;MAPQ=60;MATEID=215279:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_4336501_4361501_98C;SPAN=134;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:43:30.8:30.8,0,77:13:0:-30.83:31.94\n4\t4357945\t215279:2\tC\tC[4:4357811[\t30\tPASS\tEVDNC=ASSMB;HOMSEQ=TC;MAPQ=60;MATEID=215279:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_4336501_4361501_98C;SPAN=134;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:43:30.8:30.8,0,77:13:0:-30.83:31.94\n4\t6003698\t215740:1\tG\t]4:6004494]G\t59\tPASS\tDISC_MAPQ=16;EVDNC=DSCRD;IMPRECISE;MAPQ=16;MATEID=215740:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=4:6003698(-)-4:6004494(+)__4_6002501_6027501D;SPAN=796;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:20:18:5.4:59.4,5.4,0:0:20:-59.41:59.41\n4\t6004494\t215740:2\tG\tG[4:6003698[\t59\tPASS\tDISC_MAPQ=16;EVDNC=DSCRD;IMPRECISE;MAPQ=16;MATEID=215740:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=4:6003698(-)-4:6004494(+)__4_6002501_6027501D;SPAN=796;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:20:18:5.4:59.4,5.4,0:0:20:-59.41:59.41\n4\t6649866\t216000:1\tA\tA[4:6651184[\t46\tPASS\tEVDNC=ASSMB;HOMSEQ=CAGA;MAPQ=60;MATEID=216000:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_4_6639501_6664501_41C;SPAN=1318;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:14:16:4.2:46.2,4.2,0:14:0:-44.69:44.69\n4\t6651184\t216000:2\tC\t]4:6649866]C\t46\tPASS\tEVDNC=ASSMB;HOMSEQ=CAGA;MAPQ=60;MATEID=216000:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_4_6639501_6664501_41C;SPAN=1318;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:14:16:4.2:46.2,4.2,0:14:0:-44.69:44.69\n4\t7237365\t216212:1\tT\tT[4:7245647[\t28\tPASS\tEVDNC=ASSMB;HOMSEQ=TGCT;MAPQ=60;MATEID=216212:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_7227501_7252501_105C;SPAN=8282;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:29:28.1:28.1,0,44.6:11:0:-28.16:28.37\n4\t7245647\t216212:2\tT\t]4:7237365]T\t28\tPASS\tEVDNC=ASSMB;HOMSEQ=TGCT;MAPQ=60;MATEID=216212:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_7227501_7252501_105C;SPAN=8282;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:29:28.1:28.1,0,44.6:11:0:-28.16:28.37\n4\t7633785\t216329:1\tC\tC[4:7634126[\t16\tPASS\tEVDNC=ASSMB;HOMSEQ=C;MAPQ=60;MATEID=216329:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_7619501_7644501_96C;SPAN=341;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:7:25:16.1:16.1,0,45.8:7:0:-16.08:16.92\n4\t7634126\t216329:2\tC\t]4:7633785]C\t16\tPASS\tEVDNC=ASSMB;HOMSEQ=C;MAPQ=60;MATEID=216329:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_7619501_7644501_96C;SPAN=341;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:7:25:16.1:16.1,0,45.8:7:0:-16.08:16.92\n4\t9455471\t216861:1\tC\tC[4:9479875[\t29\tPASS\tDISC_MAPQ=54;EVDNC=DSCRD;IMPRECISE;MAPQ=54;MATEID=216861:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=4:9455471(+)-4:9479875(-)__4_9457001_9482001D;SPAN=24404;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:10:7:2.7:29.7,2.7,0:0:10:-29.71:29.71\n4\t9479875\t216861:2\tA\t]4:9455471]A\t29\tPASS\tDISC_MAPQ=27;EVDNC=DSCRD;IMPRECISE;MAPQ=27;MATEID=216861:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=4:9455471(+)-4:9479875(-)__4_9457001_9482001D;SPAN=24404;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:10:7:2.7:29.7,2.7,0:0:10:-29.71:29.71\n4\t10390921\t217253:1\tG\tG[4:10400557[\t85\tPASS\tDISC_MAPQ=59;EVDNC=DSCRD;IMPRECISE;MAPQ=59;MATEID=217253:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=4:10390921(+)-4:10400557(-)__4_10388001_10413001D;SPAN=9636;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:28:7:7.8:85.8,7.8,0:0:28:-85.82:85.82\n4\t10400557\t217253:2\tA\t]4:10390921]A\t85\tPASS\tDISC_MAPQ=58;EVDNC=DSCRD;IMPRECISE;MAPQ=58;MATEID=217253:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=4:10390921(+)-4:10400557(-)__4_10388001_10413001D;SPAN=9636;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:28:7:7.8:85.8,7.8,0:0:28:-85.82:85.82\n4\t10433876\t217260:1\tT\tT[4:10435083[\t7\tPASS\tEVDNC=ASSMB;HOMSEQ=TT;MAPQ=60;MATEID=217260:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_10412501_10437501_24C;SPAN=1207;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:4:22:7.1:7.1,0,46.7:4:0:-7.02:8.809\n4\t10435083\t217260:2\tT\t]4:10433876]T\t7\tPASS\tEVDNC=ASSMB;HOMSEQ=TT;MAPQ=60;MATEID=217260:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_10412501_10437501_24C;SPAN=1207;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:4:22:7.1:7.1,0,46.7:4:0:-7.02:8.809\n4\t11598244\t217597:1\tA\tA[4:11598838[\t27\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=217597:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_11588501_11613501_22C;SPAN=594;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:21:23.9:27.2,0,23.9:10:0:-27.11:27.11\n4\t11598838\t217597:2\tG\t]4:11598244]G\t27\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=217597:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_11588501_11613501_22C;SPAN=594;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:21:23.9:27.2,0,23.9:10:0:-27.11:27.11\n4\t17201142\t218948:1\tT\tT[4:17201444[\t62\tPASS\tEVDNC=ASSMB;HOMSEQ=TATCCTTTT;MAPQ=60;MATEID=218948:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_4_17199001_17224001_8C;SPAN=302;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:21:13:5.7:62.7,5.7,0:21:0:-62.72:62.72\n4\t17201444\t218948:2\tT\t]4:17201142]T\t62\tPASS\tEVDNC=ASSMB;HOMSEQ=TATCCTTTT;MAPQ=60;MATEID=218948:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_4_17199001_17224001_8C;SPAN=302;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:21:13:5.7:62.7,5.7,0:21:0:-62.72:62.72\n4\t18278640\t219210:1\tG\t]4:18409168]G\t32\tPASS\tEVDNC=ASSMB;INSERTION=CAATTTCAAGG;MAPQ=60;MATEID=219210:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_18399501_18424501_13C;SPAN=130528;SUBN=1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:15:5.6:32,0,5.6:11:0:-33.15:33.15\n4\t18409168\t219210:2\tA\tA[4:18278640[\t32\tPASS\tEVDNC=ASSMB;INSERTION=CAATTTCAAGG;MAPQ=60;MATEID=219210:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_18399501_18424501_13C;SPAN=130528;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:15:5.6:32,0,5.6:11:0:-33.15:33.15\n4\t19077842\t219355:1\tT\tT[4:19083928[\t0\tPASS\tDISC_MAPQ=57;EVDNC=ASDIS;HOMSEQ=CCACTGATTTGCTTT;MAPQ=60;MATEID=219355:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_4_19061001_19086001_22C;SPAN=6086;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/0:24:1328:99:0,293.7,3934:9:18:294.1:28.04\n4\t19083928\t219355:2\tC\t]4:19077842]C\t0\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=CCACTGATTTGCTTT;MAPQ=60;MATEID=219355:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_4_19061001_19086001_22C;SPAN=6086;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/0:24:1328:99:0,293.7,3934:9:18:294.1:28.04\n4\t19519813\t219488:2\tA\tA[1:103230510[\t75\tPASS\tDISC_MAPQ=60;EVDNC=TSI_G;HOMSEQ=ATACATACATATATATGTACATACATACATATATA;INSERTION=TATACGTACATACATACATATATACATACATATATACGTACATACATATATATGTACATACATACATACGTACATACATATATATGTACATACATACATATGTACATACATATATATGTACATACATACATAT;MAPQ=60;MATEID=219488:1;MATENM=4;NM=4;NUMPARTS=5;SCTG=c_4_19502001_19527001_23C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:25:5:6.9:75.9,6.9,0:24:5:-75.92:75.92\n4\t20376222\t219768:1\tA\t]4:20636643]A\t59\tPASS\tEVDNC=ASSMB;HOMSEQ=ATC;MAPQ=60;MATEID=219768:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_20629001_20654001_8C;SPAN=260421;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:20:11:5.4:59.4,5.4,0:20:0:-59.41:59.41\n4\t20577538\t219744:1\tG\tG[4:20601956[\t33\tPASS\tEVDNC=ASSMB;HOMSEQ=GTG;MAPQ=60;MATEID=219744:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_20580001_20605001_25C;SPAN=24418;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:22:20.3:33.5,0,20.3:12:0:-33.55:33.55\n4\t20601956\t219744:2\tG\t]4:20577538]G\t33\tPASS\tEVDNC=ASSMB;HOMSEQ=GTG;MAPQ=60;MATEID=219744:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_20580001_20605001_25C;SPAN=24418;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:22:20.3:33.5,0,20.3:12:0:-33.55:33.55\n4\t20636643\t219768:2\tC\tC[4:20376222[\t59\tPASS\tEVDNC=ASSMB;HOMSEQ=ATC;MAPQ=60;MATEID=219768:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_20629001_20654001_8C;SPAN=260421;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:20:11:5.4:59.4,5.4,0:20:0:-59.41:59.41\n4\t21159379\t219876:1\tA\tA[4:21165475[\t46\tPASS\tEVDNC=ASSMB;HOMSEQ=AGAAAATTATACTAAA;MAPQ=60;MATEID=219876:2;MATENM=0;NM=9;NUMPARTS=2;SCTG=c_4_21143501_21168501_4C;SPAN=6096;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:15:14:4.2:46.2,4.2,0:15:0:-46.21:46.21\n4\t21165475\t219876:2\tA\t]4:21159379]A\t46\tPASS\tEVDNC=ASSMB;HOMSEQ=AGAAAATTATACTAAA;MAPQ=60;MATEID=219876:1;MATENM=9;NM=0;NUMPARTS=2;SCTG=c_4_21143501_21168501_4C;SPAN=6096;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:15:14:4.2:46.2,4.2,0:15:0:-46.21:46.21\n4\t21714832\t768310:1\tT\t]16:63759379]T\t62\tPASS\tDISC_MAPQ=255;EVDNC=ASDIS;HOMSEQ=TTATTTTATTTTATTTTATTTTATTTTATTTTA;MAPQ=60;MATEID=768310:2;MATENM=10;NM=0;NUMPARTS=2;SCTG=c_16_63749001_63774001_22C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:21:16:5.7:62.7,5.7,0:19:2:-62.72:62.72\n4\t22150365\t224489:1\tC\tC[4:36380534[\t38\tPASS\tDISC_MAPQ=29;EVDNC=DSCRD;IMPRECISE;MAPQ=29;MATEID=224489:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=4:22150365(+)-4:36380534(-)__4_36358001_36383001D;SPAN=14230169;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:17:2:38.3,0,2:0:13:-39.65:39.65\n4\t22150805\t224490:1\tA\t]4:36381031]A\t19\tPASS\tDISC_MAPQ=28;EVDNC=DSCRD;IMPRECISE;MAPQ=28;MATEID=224490:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=4:22150805(-)-4:36381031(+)__4_36358001_36383001D;SPAN=14230226;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:24:19.7:19.7,0,39.5:0:8:-19.66:20.07\n4\t25495543\t221013:1\tG\tG[4:25495842[\t32\tPASS\tEVDNC=ASSMB;HOMSEQ=AAAGACAAGTGACAG;MAPQ=60;MATEID=221013:2;MATENM=0;NM=3;NUMPARTS=2;SCTG=c_4_25480001_25505001_129C;SPAN=299;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:14:2.6:32.3,0,2.6:11:0:-33.83:33.83\n4\t25495842\t221013:2\tA\t]4:25495543]A\t32\tPASS\tEVDNC=ASSMB;HOMSEQ=AAAGACAAGTGACAG;MAPQ=60;MATEID=221013:1;MATENM=3;NM=0;NUMPARTS=2;SCTG=c_4_25480001_25505001_129C;SPAN=299;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:14:2.6:32.3,0,2.6:11:0:-33.83:33.83\n4\t26526697\t221392:1\tC\tC[4:26526935[\t42\tPASS\tEVDNC=ASSMB;INSERTION=G;MAPQ=60;MATEID=221392:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_4_26509001_26534001_27C;SPAN=238;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:14:17:1.2:42.9,1.2,0:14:0:-43.71:43.71\n4\t26526935\t221392:2\tT\t]4:26526697]T\t42\tPASS\tEVDNC=ASSMB;INSERTION=G;MAPQ=60;MATEID=221392:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_4_26509001_26534001_27C;SPAN=238;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:14:17:1.2:42.9,1.2,0:14:0:-43.71:43.71\n4\t27069532\t221525:1\tC\t]4:27069662]C\t26\tPASS\tEVDNC=ASSMB;INSERTION=TAAAGACTTTG;MAPQ=60;MATEID=221525:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_27048001_27073001_3C;SPAN=130;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:47:26.6:26.6,0,89.3:12:0:-26.4:28.44\n4\t27069662\t221525:2\tC\tC[4:27069532[\t26\tPASS\tEVDNC=ASSMB;INSERTION=TAAAGACTTTG;MAPQ=60;MATEID=221525:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_27048001_27073001_3C;SPAN=130;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:47:26.6:26.6,0,89.3:12:0:-26.4:28.44\n4\t28562678\t222110:1\tC\tC[4:28562989[\t56\tPASS\tEVDNC=ASSMB;HOMSEQ=GAAATGAGTAATAC;MAPQ=60;MATEID=222110:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_4_28542501_28567501_34C;SPAN=311;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:18:21:2.4:56.1,2.4,0:18:0:-57:57\n4\t28562989\t222110:2\tG\t]4:28562678]G\t56\tPASS\tEVDNC=ASSMB;HOMSEQ=GAAATGAGTAATAC;MAPQ=60;MATEID=222110:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_4_28542501_28567501_34C;SPAN=311;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:18:21:2.4:56.1,2.4,0:18:0:-57:57\n4\t31012329\t222850:1\tT\tT[4:31013351[\t29\tPASS\tEVDNC=ASSMB;HOMSEQ=ATGT;MAPQ=60;MATEID=222850:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_30992501_31017501_9C;SPAN=1022;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:26:29:29,0,35.6:11:0:-29:29.05\n4\t31013351\t222850:2\tA\t]4:31012329]A\t29\tPASS\tEVDNC=ASSMB;HOMSEQ=ATGT;MAPQ=60;MATEID=222850:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_30992501_31017501_9C;SPAN=1022;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:26:29:29,0,35.6:11:0:-29:29.05\n4\t31405064\t223003:1\tC\tC[4:31405383[\t10\tPASS\tEVDNC=ASSMB;HOMSEQ=ATTATTTTC;MAPQ=60;MATEID=223003:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_31384501_31409501_18C;SPAN=319;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:68:10.7:10.7,0,159.2:9:0:-10.59:18.47\n4\t31405383\t223003:2\tA\t]4:31405064]A\t10\tPASS\tEVDNC=ASSMB;HOMSEQ=ATTATTTTC;MAPQ=60;MATEID=223003:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_31384501_31409501_18C;SPAN=319;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:68:10.7:10.7,0,159.2:9:0:-10.59:18.47\n4\t31840145\t223216:1\tG\t]4:31840263]G\t8\tPASS\tEVDNC=ASSMB;INSERTION=ATCTTT;MAPQ=60;MATEID=223216:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_31825501_31850501_67C;SPAN=118;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:5:31:8:8,0,67.4:5:0:-7.791:10.72\n4\t31840263\t223216:2\tG\tG[4:31840145[\t8\tPASS\tEVDNC=ASSMB;INSERTION=ATCTTT;MAPQ=60;MATEID=223216:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_31825501_31850501_67C;SPAN=118;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:5:31:8:8,0,67.4:5:0:-7.791:10.72\n4\t32103898\t223291:1\tT\t]4:32103993]T\t33\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=223291:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_32095001_32120001_79C;SPAN=95;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:33:33.8:33.8,0,47:13:0:-33.64:33.8\n4\t32103993\t223291:2\tC\tC[4:32103898[\t33\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=223291:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_32095001_32120001_79C;SPAN=95;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:33:33.8:33.8,0,47:13:0:-33.64:33.8\n4\t32964702\t223633:1\tT\t]4:33012312]T\t29\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TTTCATAT;MAPQ=60;MATEID=223633:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_33001501_33026501_98C;SPAN=47610;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:10:12:0:29.7,0,0:5:7:-31.35:31.35\n4\t33012312\t223633:2\tT\tT[4:32964702[\t29\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TTTCATAT;MAPQ=60;MATEID=223633:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_33001501_33026501_98C;SPAN=47610;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:10:12:0:29.7,0,0:5:7:-31.35:31.35\n4\t33471797\t223751:1\tA\tA[4:33472122[\t49\tPASS\tEVDNC=ASSMB;HOMSEQ=AAAATCACTGAAATA;MAPQ=60;MATEID=223751:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_33467001_33492001_61C;SPAN=325;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:16:19:1.8:49.5,1.8,0:16:0:-50.34:50.34\n4\t33472122\t223751:2\tA\t]4:33471797]A\t49\tPASS\tEVDNC=ASSMB;HOMSEQ=AAAATCACTGAAATA;MAPQ=60;MATEID=223751:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_33467001_33492001_61C;SPAN=325;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:16:19:1.8:49.5,1.8,0:16:0:-50.34:50.34\n4\t34530009\t223925:1\tC\tC[4:34530329[\t49\tPASS\tEVDNC=ASSMB;HOMSEQ=CAGGCCATTCCTTTC;MAPQ=60;MATEID=223925:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_4_34520501_34545501_89C;SPAN=320;SUBN=2;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:17:16:4.5:49.5,4.5,0:17:0:-49.51:49.51\n4\t34530329\t223925:2\tC\t]4:34530009]C\t49\tPASS\tEVDNC=ASSMB;HOMSEQ=CAGGCCATTCCTTTC;MAPQ=60;MATEID=223925:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_4_34520501_34545501_89C;SPAN=320;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:17:16:4.5:49.5,4.5,0:17:0:-49.51:49.51\n4\t36380534\t224489:2\tG\t]4:22150365]G\t38\tPASS\tDISC_MAPQ=22;EVDNC=DSCRD;IMPRECISE;MAPQ=22;MATEID=224489:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=4:22150365(+)-4:36380534(-)__4_36358001_36383001D;SPAN=14230169;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:17:2:38.3,0,2:0:13:-39.65:39.65\n4\t36381031\t224490:2\tC\tC[4:22150805[\t19\tPASS\tDISC_MAPQ=50;EVDNC=DSCRD;IMPRECISE;MAPQ=50;MATEID=224490:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=4:22150805(-)-4:36381031(+)__4_36358001_36383001D;SPAN=14230226;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:24:19.7:19.7,0,39.5:0:8:-19.66:20.07\n4\t36841138\t224648:1\tT\tT[4:36841468[\t31\tPASS\tEVDNC=ASSMB;HOMSEQ=TGGATGAATCTTCT;MAPQ=60;MATEID=224648:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_4_36823501_36848501_12C;SPAN=330;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:19:14.6:31.1,0,14.6:11:0:-31.19:31.19\n4\t36841468\t224648:2\tT\t]4:36841138]T\t31\tPASS\tEVDNC=ASSMB;HOMSEQ=TGGATGAATCTTCT;MAPQ=60;MATEID=224648:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_4_36823501_36848501_12C;SPAN=330;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:19:14.6:31.1,0,14.6:11:0:-31.19:31.19\n4\t39029470\t225324:1\tT\tT[4:39029739[\t26\tPASS\tEVDNC=ASSMB;HOMSEQ=AAGAACTAATTTTT;MAPQ=60;MATEID=225324:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_39028501_39053501_38C;SPAN=269;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:25:26:26,0,35.9:10:0:-25.98:26.09\n4\t39029739\t225324:2\tA\t]4:39029470]A\t26\tPASS\tEVDNC=ASSMB;HOMSEQ=AAGAACTAATTTTT;MAPQ=60;MATEID=225324:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_39028501_39053501_38C;SPAN=269;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:25:26:26,0,35.9:10:0:-25.98:26.09\n4\t40023395\t225782:1\tT\tT[4:40024660[\t49\tPASS\tDISC_MAPQ=54;EVDNC=DSCRD;IMPRECISE;MAPQ=54;MATEID=225782:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=4:40023395(+)-4:40024660(-)__4_40008501_40033501D;SPAN=1265;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:17:12:4.5:49.5,4.5,0:0:17:-49.51:49.51\n4\t40024660\t225782:2\tT\t]4:40023395]T\t49\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=225782:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=4:40023395(+)-4:40024660(-)__4_40008501_40033501D;SPAN=1265;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:17:12:4.5:49.5,4.5,0:0:17:-49.51:49.51\n4\t42903148\t226777:1\tT\tT[4:42903837[\t21\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=226777:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_42899501_42924501_62C;SPAN=689;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:17:18.5:21.8,0,18.5:8:0:-21.63:21.63\n4\t42903837\t226777:2\tT\t]4:42903148]T\t21\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=226777:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_42899501_42924501_62C;SPAN=689;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:17:18.5:21.8,0,18.5:8:0:-21.63:21.63\n4\t46200780\t227682:1\tC\tC[4:46203010[\t62\tPASS\tEVDNC=ASSMB;HOMSEQ=TC;MAPQ=60;MATEID=227682:2;MATENM=3;NM=2;NUMPARTS=2;SCTG=c_4_46182501_46207501_3C;SPAN=2230;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:21:10:5.7:62.7,5.7,0:21:0:-62.72:62.72\n4\t46203010\t227682:2\tT\t]4:46200780]T\t62\tPASS\tEVDNC=ASSMB;HOMSEQ=TC;MAPQ=60;MATEID=227682:1;MATENM=2;NM=3;NUMPARTS=2;SCTG=c_4_46182501_46207501_3C;SPAN=2230;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:21:10:5.7:62.7,5.7,0:21:0:-62.72:62.72\n4\t49932115\t229270:1\tT\tT[4:51702561[\t26\tPASS\tDISC_MAPQ=38;EVDNC=DSCRD;IMPRECISE;MAPQ=38;MATEID=229270:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=4:49932115(+)-4:51702561(-)__4_51695001_51720001D;SPAN=1770446;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:9:8:2.4:26.4,2.4,0:0:9:-26.41:26.41\n4\t51702561\t229270:2\tC\t]4:49932115]C\t26\tPASS\tDISC_MAPQ=37;EVDNC=DSCRD;IMPRECISE;MAPQ=37;MATEID=229270:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=4:49932115(+)-4:51702561(-)__4_51695001_51720001D;SPAN=1770446;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:9:8:2.4:26.4,2.4,0:0:9:-26.41:26.41\n4\t52081946\t229353:1\tG\t]4:52082092]G\t35\tPASS\tEVDNC=ASSMB;INSERTION=A;MAPQ=60;MATEID=229353:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_52062501_52087501_37C;SPAN=146;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:40:35:35,0,64.7:14:0:-34.97:35.49\n4\t52082092\t229353:2\tA\tA[4:52081946[\t35\tPASS\tEVDNC=ASSMB;INSERTION=A;MAPQ=60;MATEID=229353:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_52062501_52087501_37C;SPAN=146;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:40:35:35,0,64.7:14:0:-34.97:35.49\n4\t54616269\t230068:1\tC\tC[4:54616574[\t32\tPASS\tEVDNC=ASSMB;HOMSEQ=AAGAAAGCTTATTTACC;MAPQ=60;MATEID=230068:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_4_54610501_54635501_78C;SPAN=305;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:16:5.6:32,0,5.6:11:0:-32.57:32.57\n4\t54616574\t230068:2\tA\t]4:54616269]A\t32\tPASS\tEVDNC=ASSMB;HOMSEQ=AAGAAAGCTTATTTACC;MAPQ=60;MATEID=230068:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_4_54610501_54635501_78C;SPAN=305;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:16:5.6:32,0,5.6:11:0:-32.57:32.57\n4\t54942519\t230152:1\tA\tA[4:54942753[\t23\tPASS\tEVDNC=ASSMB;HOMSEQ=AAAACAAAACA;MAPQ=60;MATEID=230152:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_54929001_54954001_18C;SPAN=234;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:23:23.3:23.3,0,33.2:9:0:-23.24:23.37\n4\t54942753\t230152:2\tA\t]4:54942519]A\t23\tPASS\tEVDNC=ASSMB;HOMSEQ=AAAACAAAACA;MAPQ=60;MATEID=230152:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_54929001_54954001_18C;SPAN=234;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:23:23.3:23.3,0,33.2:9:0:-23.24:23.37\n4\t55132403\t230208:1\tT\tT[4:55132722[\t36\tPASS\tEVDNC=ASSMB;HOMSEQ=GAGGTTTAGAAAGTTT;MAPQ=60;MATEID=230208:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_55125001_55150001_117C;SPAN=319;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:12:11:3.3:36.3,3.3,0:12:0:-36.31:36.31\n4\t55132722\t230208:2\tG\t]4:55132403]G\t36\tPASS\tEVDNC=ASSMB;HOMSEQ=GAGGTTTAGAAAGTTT;MAPQ=60;MATEID=230208:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_55125001_55150001_117C;SPAN=319;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:12:11:3.3:36.3,3.3,0:12:0:-36.31:36.31\n4\t57429014\t230950:1\tG\t]4:57429550]G\t20\tPASS\tDISC_MAPQ=43;EVDNC=ASDIS;HOMSEQ=GGTTTCACCATGTTGGCCAGG;MAPQ=36;MATEID=230950:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_4_57428001_57453001_17C;SPAN=536;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:22:20.3:20.3,0,33.5:4:5:-20.22:20.45\n4\t57429550\t230950:2\tG\tG[4:57429014[\t20\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=GGTTTCACCATGTTGGCCAGG;MAPQ=60;MATEID=230950:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_4_57428001_57453001_17C;SPAN=536;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:22:20.3:20.3,0,33.5:4:5:-20.22:20.45\n4\t58562833\t231342:1\tT\t]4:58569632]T\t74\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;INSERTION=G;MAPQ=60;MATEID=231342:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_58555001_58580001_19C;SPAN=6799;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:26:40:25.1:74.6,0,25.1:18:17:-75.86:75.86\n4\t58562834\t231343:1\tT\tT[4:58569374[\t48\tPASS\tEVDNC=ASSMB;HOMSEQ=TTTT;MAPQ=60;MATEID=231343:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_58555001_58580001_47C;SPAN=6540;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:18:39:48.5:48.5,0,48.5:18:0:-48.46:48.46\n4\t58569374\t231343:2\tT\t]4:58562834]T\t48\tPASS\tEVDNC=ASSMB;HOMSEQ=TTTT;MAPQ=60;MATEID=231343:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_58555001_58580001_47C;SPAN=6540;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:18:39:48.5:48.5,0,48.5:18:0:-48.46:48.46\n4\t58569632\t231342:2\tT\tT[4:58562833[\t74\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;INSERTION=G;MAPQ=60;MATEID=231342:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_58555001_58580001_19C;SPAN=6799;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:26:40:25.1:74.6,0,25.1:18:17:-75.86:75.86\n4\t58790074\t231475:1\tA\t]4:58808344]A\t42\tPASS\tDISC_MAPQ=58;EVDNC=ASDIS;HOMSEQ=AA;MAPQ=60;MATEID=231475:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_4_58800001_58825001_79C;SPAN=18270;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:13:14:3.9:42.9,3.9,0:9:9:-42.71:42.71\n4\t58808344\t231475:2\tA\tA[4:58790074[\t42\tPASS\tDISC_MAPQ=54;EVDNC=ASDIS;HOMSEQ=AA;MAPQ=60;MATEID=231475:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_4_58800001_58825001_79C;SPAN=18270;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:13:14:3.9:42.9,3.9,0:9:9:-42.71:42.71\n4\t59078961\t231628:1\tT\tT[4:59084875[\t99\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=231628:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=4:59078961(+)-4:59084875(-)__4_59069501_59094501D;SPAN=5914;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:34:9:9.3:102.3,9.3,0:0:34:-102.3:102.3\n4\t59084875\t231628:2\tA\t]4:59078961]A\t99\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=231628:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=4:59078961(+)-4:59084875(-)__4_59069501_59094501D;SPAN=5914;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:34:9:9.3:102.3,9.3,0:0:34:-102.3:102.3\n4\t60231729\t697955:1\tT\tT[14:52425216[\t26\tPASS\tEVDNC=ASSMB;HOMSEQ=T;MAPQ=60;MATEID=697955:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_14_52405501_52430501_22C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:12:3.2:26.3,0,3.2:9:0:-27.29:27.29\n4\t60232158\t697967:1\tT\t]14:52476005]T\t22\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=T;MAPQ=60;MATEID=697967:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_52454501_52479501_37C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:25:22.7:22.7,0,39.2:7:8:-22.68:22.95\n4\t60450062\t232202:1\tT\tT]4:60454315]\t23\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=232202:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=4:60450062(+)-4:60454315(+)__4_60441501_60466501D;SPAN=4253;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:45:23.6:23.6,0,89.6:0:11:-23.66:25.82\n4\t60454315\t232202:2\tA\tA]4:60450062]\t23\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=232202:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=4:60450062(+)-4:60454315(+)__4_60441501_60466501D;SPAN=4253;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:45:23.6:23.6,0,89.6:0:11:-23.66:25.82\n4\t61073473\t232396:1\tA\tA[4:61076526[\t56\tPASS\tEVDNC=ASSMB;HOMSEQ=AA;MAPQ=60;MATEID=232396:2;MATENM=3;NM=1;NUMPARTS=2;SCTG=c_4_61054001_61079001_21C;SPAN=3053;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:19:11:5.1:56.1,5.1,0:19:0:-56.11:56.11\n4\t61076526\t232396:2\tA\t]4:61073473]A\t56\tPASS\tEVDNC=ASSMB;HOMSEQ=AA;MAPQ=60;MATEID=232396:1;MATENM=1;NM=3;NUMPARTS=2;SCTG=c_4_61054001_61079001_21C;SPAN=3053;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:19:11:5.1:56.1,5.1,0:19:0:-56.11:56.11\n4\t61162594\t232429:1\tG\tG[4:61162877[\t50\tPASS\tEVDNC=ASSMB;HOMSEQ=G;MAPQ=60;MATEID=232429:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_61152001_61177001_22C;SPAN=283;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:18:32:27.5:50.6,0,27.5:18:0:-50.7:50.7\n4\t61162877\t232429:2\tG\t]4:61162594]G\t50\tPASS\tEVDNC=ASSMB;HOMSEQ=G;MAPQ=60;MATEID=232429:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_61152001_61177001_22C;SPAN=283;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:18:32:27.5:50.6,0,27.5:18:0:-50.7:50.7\n4\t61939924\t232702:1\tT\t]9:41047840]T\t26\tPASS\tDISC_MAPQ=8;EVDNC=ASDIS;HOMSEQ=TTT;MAPQ=14;MATEID=232702:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_61936001_61961001_17C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:9:8:2.4:26.4,2.4,0:8:5:-26.41:26.41\n4\t63062069\t357378:1\tC\t[6:101065929[C\t69\tPASS\tDISC_MAPQ=54;EVDNC=ASDIS;INSERTION=TACAAACTCACTGGGAGGAA;MAPQ=60;MATEID=357378: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]4:69601740]A\t46\tPASS\tEVDNC=ASSMB;INSERTION=CAACCAGCTGGTGCTAAC;MAPQ=60;MATEID=235472:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_4_69604501_69629501_122C;SPAN=5345;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:16:5:4.2:46.2,4.2,0:16:0:-46.21:46.21\n4\t70009057\t235602:1\tG\t]4:70009155]G\t54\tPASS\tEVDNC=ASSMB;HOMSEQ=GGAAAG;MAPQ=60;MATEID=235602:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_4_69996501_70021501_59C;SPAN=98;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:21:53:54.5:54.5,0,77.6:21:0:-54.42:54.67\n4\t70009155\t235602:2\tG\tG[4:70009057[\t54\tPASS\tEVDNC=ASSMB;HOMSEQ=GGAAAG;MAPQ=60;MATEID=235602:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_4_69996501_70021501_59C;SPAN=98;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:21:53:54.5:54.5,0,77.6:21:0:-54.42:54.67\n4\t70092925\t235620:1\tA\t[Un_JTFH01000105v1_decoy:1[A\t99\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=235620:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_70070001_70095001_57C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:34:14:9.3:102.3,9.3,0:34:0:-102.3:102.3\n4\t70132919\t347771:1\tT\tT[6:69542551[\t29\tPASS\tEVDNC=ASSMB;HOMSEQ=GCT;MAPQ=60;MATEID=347771:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_69531001_69556001_22C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:13:2.9:29.3,0,2.9:10:0:-30.55:30.55\n4\t70133000\t347773:1\tA\t]6:69542531]A\t20\tPASS\tEVDNC=ASSMB;HOMSEQ=ATCCCA;MAPQ=60;MATEID=347773:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_69531001_69556001_105C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:7:10:3.8:20.3,0,3.8:7:0:-20.82:20.82\n4\t70133226\t235647:1\tC\tC[4:70133846[\t37\tPASS\tEVDNC=ASSMB;HOMSEQ=TACCC;MAPQ=60;MATEID=235647:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_4_70119001_70144001_18C;SPAN=620;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:19:8:37.7,0,8:13:0:-38.44:38.44\n4\t70133846\t235647:2\tT\t]4:70133226]T\t37\tPASS\tEVDNC=ASSMB;HOMSEQ=TACCC;MAPQ=60;MATEID=235647:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_4_70119001_70144001_18C;SPAN=620;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:19:8:37.7,0,8:13:0:-38.44:38.44\n4\t72234750\t236443:1\tG\t]4:72287710]G\t25\tPASS\tEVDNC=ASSMB;INSERTION=TGTGTGACA;MAPQ=47;MATEID=236443:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_72275001_72300001_16C;SPAN=52960;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:14:9.2:25.7,0,9.2:9:0:-26.19:26.19\n4\t72287710\t236443:2\tA\tA[4:72234750[\t25\tPASS\tEVDNC=ASSMB;INSERTION=TGTGTGACA;MAPQ=60;MATEID=236443:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_72275001_72300001_16C;SPAN=52960;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:14:9.2:25.7,0,9.2:9:0:-26.19:26.19\n4\t72965532\t236699:1\tA\tA[4:72966104[\t38\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=A;MAPQ=59;MATEID=236699:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_72961001_72986001_22C;SPAN=572;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:27:28.7:38.6,0,28.7:8:10:-38.69:38.69\n4\t72966104\t236699:2\tA\t]4:72965532]A\t38\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=A;MAPQ=60;MATEID=236699:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_72961001_72986001_22C;SPAN=572;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:27:28.7:38.6,0,28.7:8:10:-38.69:38.69\n4\t74717517\t237170:1\tT\tT[4:74723589[\t46\tPASS\tDISC_MAPQ=31;EVDNC=DSCRD;IMPRECISE;MAPQ=31;MATEID=237170:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=4:74717517(+)-4:74723589(-)__4_74700501_74725501D;SPAN=6072;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:16:6:4.2:46.2,4.2,0:0:16:-46.21:46.21\n4\t74723589\t237170:2\tC\t]4:74717517]C\t46\tPASS\tDISC_MAPQ=46;EVDNC=DSCRD;IMPRECISE;MAPQ=46;MATEID=237170:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=4:74717517(+)-4:74723589(-)__4_74700501_74725501D;SPAN=6072;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:16:6:4.2:46.2,4.2,0:0:16:-46.21:46.21\n4\t76427327\t898387:1\tA\tA[21:18857736[\t23\tPASS\tDISC_MAPQ=54;EVDNC=DSCRD;IMPRECISE;MAPQ=54;MATEID=898387:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=4:76427327(+)-21:18857736(-)__21_18840501_18865501D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:12:6.5:23,0,6.5:0:8:-23.49:23.49\n4\t79284589\t238752:1\tG\tG[4:79284903[\t66\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AAAGAATGATTGAGG;MAPQ=60;MATEID=238752:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_79282001_79307001_61C;SPAN=314;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:22:20:6:66,6,0:14:10:-66.02:66.02\n4\t79284903\t238752:2\tA\t]4:79284589]A\t66\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AAAGAATGATTGAGG;MAPQ=60;MATEID=238752:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_79282001_79307001_61C;SPAN=314;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:22:20:6:66,6,0:14:10:-66.02:66.02\n4\t79966908\t238958:1\tG\tG[4:79972938[\t33\tPASS\tEVDNC=ASSMB;HOMSEQ=AAGAATAGGGCGTCCG;MAPQ=60;MATEID=238958:2;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_4_79968001_79993001_85C;SPAN=6030;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:11:13:0.3:33,0.3,0:11:0:-34.67:34.67\n4\t79972938\t238958:2\tA\t]4:79966908]A\t33\tPASS\tEVDNC=ASSMB;HOMSEQ=AAGAATAGGGCGTCCG;MAPQ=60;MATEID=238958:1;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_4_79968001_79993001_85C;SPAN=6030;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:11:13:0.3:33,0.3,0:11:0:-34.67:34.67\n4\t79973439\t280936:1\tT\tT[5:21207604[\t99\tPASS\tDISC_MAPQ=58;EVDNC=DSCRD;IMPRECISE;MAPQ=58;MATEID=280936:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=4:79973439(+)-5:21207604(-)__5_21192501_21217501D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:34:36:9.9:108.9,9.9,0:0:34:-108.9:108.9\n4\t80381385\t239062:1\tT\tT[4:80381712[\t73\tPASS\tEVDNC=ASSMB;HOMSEQ=CATATACATTTTT;MAPQ=60;MATEID=239062:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_4_80360001_80385001_47C;SPAN=327;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:25:32:4.4:73.7,0,4.4:25:0:-76.74:76.74\n4\t80381712\t239062:2\tC\t]4:80381385]C\t73\tPASS\tEVDNC=ASSMB;HOMSEQ=CATATACATTTTT;MAPQ=60;MATEID=239062:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_4_80360001_80385001_47C;SPAN=327;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:25:32:4.4:73.7,0,4.4:25:0:-76.74:76.74\n4\t83253876\t240056:1\tT\t]4:83481515]T\t17\tPASS\tEVDNC=ASSMB;INSERTION=G;MAPQ=60;MATEID=240056:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_4_83471501_83496501_117C;SPAN=227639;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:7:22:17:17,0,36.8:7:0:-16.92:17.39\n4\t83481515\t240056:2\tT\tT[4:83253876[\t17\tPASS\tEVDNC=ASSMB;INSERTION=G;MAPQ=60;MATEID=240056:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_4_83471501_83496501_117C;SPAN=227639;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:7:22:17:17,0,36.8:7:0:-16.92:17.39\n4\t83695488\t243022:1\tA\t]4:93378383]A\t52\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=ACCTTGT;MAPQ=60;MATEID=243022:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_4_93369501_93394501_6C;SPAN=9682895;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:16:18:4.8:52.8,4.8,0:10:11:-51.41:51.41\n4\t85643235\t240634:1\tT\tT[4:85643564[\t25\tPASS\tEVDNC=ASSMB;HOMSEQ=TGT;MAPQ=60;MATEID=240634:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_85627501_85652501_117C;SPAN=329;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:17:111:25.1:25.1,0,252.8:17:0:-24.92:36.04\n4\t85643564\t240634:2\tT\t]4:85643235]T\t25\tPASS\tEVDNC=ASSMB;HOMSEQ=TGT;MAPQ=60;MATEID=240634:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_85627501_85652501_117C;SPAN=329;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:17:111:25.1:25.1,0,252.8:17:0:-24.92:36.04\n4\t87347149\t241148:1\tG\tG[4:87353146[\t50\tPASS\tDISC_MAPQ=55;EVDNC=DSCRD;IMPRECISE;MAPQ=55;MATEID=241148:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=4:87347149(+)-4:87353146(-)__4_87342501_87367501D;SPAN=5997;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:17:21:0.8:50.3,0,0.8:0:17:-52.77:52.77\n4\t87353146\t241148:2\tC\t]4:87347149]C\t50\tPASS\tDISC_MAPQ=59;EVDNC=DSCRD;IMPRECISE;MAPQ=59;MATEID=241148:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=4:87347149(+)-4:87353146(-)__4_87342501_87367501D;SPAN=5997;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:17:21:0.8:50.3,0,0.8:0:17:-52.77:52.77\n4\t87562748\t241261:1\tC\tC[4:87565161[\t95\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AAAAAGTTACAAACAAC;MAPQ=60;MATEID=241261:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_87563001_87588001_2C;SPAN=2413;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:30:32:8.7:95.7,8.7,0:16:24:-95.72:95.72\n4\t87565161\t241261:2\tA\t]4:87562748]A\t95\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AAAAAGTTACAAACAAC;MAPQ=60;MATEID=241261:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_87563001_87588001_2C;SPAN=2413;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:30:32:8.7:95.7,8.7,0:16:24:-95.72:95.72\n4\t87918124\t241445:1\tT\t]4:87922117]T\t12\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=241445:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=4:87918124(-)-4:87922117(+)__4_87906001_87931001D;SPAN=3993;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:49:12.8:12.8,0,108.5:0:8:-12.63:17.2\n4\t87922117\t241445:2\tT\tT[4:87918124[\t12\tPASS\tDISC_MAPQ=43;EVDNC=DSCRD;IMPRECISE;MAPQ=43;MATEID=241445:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=4:87918124(-)-4:87922117(+)__4_87906001_87931001D;SPAN=3993;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:49:12.8:12.8,0,108.5:0:8:-12.63:17.2\n4\t87926012\t241456:1\tT\t[4:87937548[T\t82\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;INSERTION=T;MAPQ=60;MATEID=241456:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_87930501_87955501_67C;SPAN=11536;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:27:18:7.5:82.5,7.5,0:19:14:-82.52:82.52\n4\t87937548\t241456:2\tT\t[4:87926012[T\t82\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;INSERTION=T;MAPQ=60;MATEID=241456:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_87930501_87955501_67C;SPAN=11536;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:27:18:7.5:82.5,7.5,0:19:14:-82.52:82.52\n4\t87999639\t241468:1\tA\tA[4:88000093[\t29\tPASS\tEVDNC=ASSMB;HOMSEQ=AAAAAAAAA;MAPQ=60;MATEID=241468:2;MATENM=4;NM=0;NUMPARTS=2;SCTG=c_4_87979501_88004501_147C;SPAN=454;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:25:29.3:29.3,0,32.6:11:0:-29.28:29.3\n4\t88000093\t241468:2\tA\t]4:87999639]A\t29\tPASS\tEVDNC=ASSMB;HOMSEQ=AAAAAAAAA;MAPQ=60;MATEID=241468:1;MATENM=0;NM=4;NUMPARTS=2;SCTG=c_4_87979501_88004501_147C;SPAN=454;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:25:29.3:29.3,0,32.6:11:0:-29.28:29.3\n4\t88171507\t241535:1\tA\tA[Un_KN707742v1_decoy:1[\t26\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=241535:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_88151001_88176001_126C;SPAN=-1;SUBN=2;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:13:6.2:26,0,6.2:9:0:-26.69:26.69\n4\t88760322\t241695:1\tT\tT[4:88760632[\t27\tPASS\tEVDNC=ASSMB;HOMSEQ=AGAAATGCCAAGT;MAPQ=60;MATEID=241695:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_4_88739001_88764001_2C;SPAN=310;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:20:20.9:27.5,0,20.9:10:0:-27.41:27.41\n4\t88760632\t241695:2\tA\t]4:88760322]A\t27\tPASS\tEVDNC=ASSMB;HOMSEQ=AGAAATGCCAAGT;MAPQ=60;MATEID=241695:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_4_88739001_88764001_2C;SPAN=310;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:20:20.9:27.5,0,20.9:10:0:-27.41:27.41\n4\t89152989\t242554:1\tA\t[4:91298139[A\t40\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AGT;MAPQ=60;MATEID=242554:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_91287001_91312001_23C;SPAN=2145150;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:22:13.7:40.1,0,13.7:10:6:-40.63:40.63\n4\t89522258\t242557:1\tA\tA[4:91297454[\t35\tPASS\tEVDNC=ASSMB;INSERTION=GTTT;MAPQ=60;MATEID=242557:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_91287001_91312001_35C;SPAN=1775196;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:16:2.3:35.3,0,2.3:12:0:-36.39:36.39\n4\t90179639\t242218:1\tT\t]4:90205868]T\t26\tPASS\tEVDNC=ASSMB;HOMSEQ=T;MAPQ=60;MATEID=242218:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_90184501_90209501_34C;SPAN=26229;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:24:26.3:26.3,0,32.9:10:0:-26.26:26.32\n4\t90205868\t242218:2\tT\tT[4:90179639[\t26\tPASS\tEVDNC=ASSMB;HOMSEQ=T;MAPQ=60;MATEID=242218:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_90184501_90209501_34C;SPAN=26229;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:24:26.3:26.3,0,32.9:10:0:-26.26:26.32\n4\t90473715\t242279:1\tC\tC[4:90478988[\t19\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=CTC;MAPQ=60;MATEID=242279:2;MATENM=0;NM=0;NUMPARTS=2;REPSEQ=CTCTCT;SCTG=c_4_90478501_90503501_31C;SECONDARY;SPAN=5273;SUBN=9;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:13:4.2:19.8,0,4.2:1:9:-20.4:20.4\n4\t90478988\t242279:2\tC\t]4:90473715]C\t19\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=CTC;MAPQ=0;MATEID=242279:1;MATENM=0;NM=0;NUMPARTS=2;REPSEQ=CTCTCT;SCTG=c_4_90478501_90503501_31C;SECONDARY;SPAN=5273;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:13:4.2:19.8,0,4.2:1:9:-20.4:20.4\n4\t90570520\t242324:1\tA\tA[4:90744228[\t36\tPASS\tEVDNC=ASSMB;HOMSEQ=A;MAPQ=60;MATEID=242324:2;MATENM=5;NM=0;NUMPARTS=2;SCTG=c_4_90723501_90748501_0C;SPAN=173708;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:12:2:3.3:36.3,3.3,0:12:0:-36.31:36.31\n4\t90635828\t242338:1\tC\tC[4:90816456[\t39\tPASS\tEVDNC=ASSMB;HOMSEQ=C;MAPQ=60;MATEID=242338:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_90797001_90822001_26C;SPAN=180628;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:13:15:0.9:39.6,0.9,0:13:0:-41.34:41.34\n4\t90675647\t242318:1\tT\tT[4:90681758[\t22\tPASS\tEVDNC=ASSMB;HOMSEQ=GTGTTTTTATCTT;MAPQ=60;MATEID=242318:2;MATENM=5;NM=3;NUMPARTS=2;SCTG=c_4_90674501_90699501_16C;SPAN=6111;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:15:15.5:22.1,0,15.5:8:0:-22.25:22.25\n4\t90681758\t242318:2\tG\t]4:90675647]G\t22\tPASS\tEVDNC=ASSMB;HOMSEQ=GTGTTTTTATCTT;MAPQ=60;MATEID=242318:1;MATENM=3;NM=5;NUMPARTS=2;SCTG=c_4_90674501_90699501_16C;SPAN=6111;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:15:15.5:22.1,0,15.5:8:0:-22.25:22.25\n4\t90685271\t242386:1\tC\tC[4:90934883[\t46\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;INSERTION=TAC;MAPQ=60;MATEID=242386:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_4_90919501_90944501_46C;SPAN=249612;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:16:14:4.2:46.2,4.2,0:11:10:-46.21:46.21\n4\t90744228\t242324:2\tA\t]4:90570520]A\t36\tPASS\tEVDNC=ASSMB;HOMSEQ=A;MAPQ=60;MATEID=242324:1;MATENM=0;NM=5;NUMPARTS=2;SCTG=c_4_90723501_90748501_0C;SPAN=173708;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:12:2:3.3:36.3,3.3,0:12:0:-36.31:36.31\n4\t90816456\t242338:2\tC\t]4:90635828]C\t39\tPASS\tEVDNC=ASSMB;HOMSEQ=C;MAPQ=60;MATEID=242338:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_90797001_90822001_26C;SPAN=180628;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:13:15:0.9:39.6,0.9,0:13:0:-41.34:41.34\n4\t90834186\t242353:1\tC\tC[4:90834716[\t16\tPASS\tEVDNC=ASSMB;INSERTION=TATTTTCCTTCCTAGTAC;MAPQ=60;MATEID=242353:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_4_90821501_90846501_42C;SPAN=530;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:7:24:16.4:16.4,0,42.8:7:0:-16.36:17.07\n4\t90834716\t242353:2\tT\t]4:90834186]T\t16\tPASS\tEVDNC=ASSMB;INSERTION=TATTTTCCTTCCTAGTAC;MAPQ=60;MATEID=242353:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_4_90821501_90846501_42C;SPAN=530;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:7:24:16.4:16.4,0,42.8:7:0:-16.36:17.07\n4\t90836102\t242387:1\tT\tT[4:90927944[\t29\tPASS\tEVDNC=ASSMB;HOMSEQ=TAT;MAPQ=60;MATEID=242387:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_4_90919501_90944501_12C;SPAN=91842;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:10:8:2.7:29.7,2.7,0:10:0:-29.71:29.71\n4\t90927944\t242387:2\tT\t]4:90836102]T\t29\tPASS\tEVDNC=ASSMB;HOMSEQ=TAT;MAPQ=60;MATEID=242387:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_4_90919501_90944501_12C;SPAN=91842;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:10:8:2.7:29.7,2.7,0:10:0:-29.71:29.71\n4\t90934883\t242386:2\tA\t]4:90685271]A\t46\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;INSERTION=TAC;MAPQ=60;MATEID=242386:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_4_90919501_90944501_46C;SPAN=249612;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:16:14:4.2:46.2,4.2,0:11:10:-46.21:46.21\n4\t90997734\t242586:1\tG\tG[4:91373474[\t41\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TG;MAPQ=60;MATEID=242586:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_4_91360501_91385501_11C;SPAN=375740;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:19:4.7:41,0,4.7:11:9:-42.24:42.24\n4\t91010406\t242436:1\tA\tA[4:91014686[\t32\tPASS\tEVDNC=ASSMB;HOMSEQ=A;MAPQ=60;MATEID=242436:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_4_90993001_91018001_49C;SPAN=4280;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:16:5.6:32,0,5.6:11:0:-32.57:32.57\n4\t91014686\t242436:2\tA\t]4:91010406]A\t32\tPASS\tEVDNC=ASSMB;HOMSEQ=A;MAPQ=60;MATEID=242436:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_4_90993001_91018001_49C;SPAN=4280;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:16:5.6:32,0,5.6:11:0:-32.57:32.57\n4\t91092356\t242516:1\tT\tT[4:91226523[\t39\tPASS\tEVDNC=ASSMB;HOMSEQ=CATGT;MAPQ=60;MATEID=242516:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_91213501_91238501_7C;SPAN=134167;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:13:16:0.9:39.6,0.9,0:13:0:-40.41:40.41\n4\t91154925\t242510:1\tC\tC[4:91191964[\t82\tPASS\tEVDNC=ASSMB;HOMSEQ=C;MAPQ=59;MATEID=242510:2;MATENM=8;NM=3;NUMPARTS=2;SCTG=c_4_91189001_91214001_1C;SPAN=37039;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:27:6:7.5:82.5,7.5,0:27:0:-82.52:82.52\n4\t91191964\t242510:2\tC\t]4:91154925]C\t82\tPASS\tEVDNC=ASSMB;HOMSEQ=C;MAPQ=59;MATEID=242510:1;MATENM=3;NM=8;NUMPARTS=2;SCTG=c_4_91189001_91214001_1C;SPAN=37039;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:27:6:7.5:82.5,7.5,0:27:0:-82.52:82.52\n4\t91226523\t242516:2\tC\t]4:91092356]C\t39\tPASS\tEVDNC=ASSMB;HOMSEQ=CATGT;MAPQ=60;MATEID=242516:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_91213501_91238501_7C;SPAN=134167;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:13:16:0.9:39.6,0.9,0:13:0:-40.41:40.41\n4\t91297454\t242557:2\tA\t]4:89522258]A\t35\tPASS\tEVDNC=ASSMB;INSERTION=GTTT;MAPQ=60;MATEID=242557:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_91287001_91312001_35C;SPAN=1775196;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:16:2.3:35.3,0,2.3:12:0:-36.39:36.39\n4\t91298139\t242554:2\tA\t[4:89152989[A\t40\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AGT;MAPQ=60;MATEID=242554:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_91287001_91312001_23C;SPAN=2145150;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:22:13.7:40.1,0,13.7:10:6:-40.63:40.63\n4\t91298270\t242563:1\tA\tA]4:91298737]\t23\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=242563:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=4:91298270(+)-4:91298737(+)__4_91287001_91312001D;SPAN=467;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:33:23.9:23.9,0,56.9:0:10:-23.73:24.58\n4\t91298737\t242563:2\tC\tC]4:91298270]\t23\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=242563:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=4:91298270(+)-4:91298737(+)__4_91287001_91312001D;SPAN=467;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:33:23.9:23.9,0,56.9:0:10:-23.73:24.58\n4\t91373474\t242586:2\tT\t]4:90997734]T\t41\tPASS\tDISC_MAPQ=53;EVDNC=ASDIS;HOMSEQ=TG;MAPQ=60;MATEID=242586:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_4_91360501_91385501_11C;SPAN=375740;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:19:4.7:41,0,4.7:11:9:-42.24:42.24\n4\t91668387\t242661:1\tA\t]4:132470810]A\t25\tPASS\tDISC_MAPQ=60;EVDNC=TSI_L;MAPQ=60;MATEID=242661:2;MATENM=0;NM=0;NUMPARTS=3;SCTG=c_4_91654501_91679501_22C;SPAN=40802423;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:26:25.7:25.7,0,38.9:9:3:-25.7:25.87\n4\t92646207\t242852:1\tT\t]Un_JTFH01000254v1_decoy:397]T\t89\tPASS\tEVDNC=ASSMB;HOMSEQ=TTTCT;MAPQ=60;MATEID=242852:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_92634501_92659501_23C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:27:29:8.1:89.1,8.1,0:27:0:-88.89:88.89\n4\t92647307\t242855:1\tG\tG[Un_JTFH01000254v1_decoy:1952[\t95\tPASS\tEVDNC=ASSMB;HOMSEQ=AG;MAPQ=60;MATEID=242855:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_92634501_92659501_1C;SPAN=-1;SUBN=2;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:32:22:8.7:95.7,8.7,0:32:0:-95.72:95.72\n4\t93189624\t242967:1\tT\tT[4:93191584[\t32\tPASS\tEVDNC=ASSMB;INSERTION=ATCAAATATCAAAAATCATATATCAAATATCATATATTCAAATATCACTTAGTGA;MAPQ=60;MATEID=242967:2;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_4_93173501_93198501_25C;SPAN=1960;SUBN=5;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:38:32.3:32.3,0,62:13:0:-32.23:32.79\n4\t93191584\t242967:2\tT\t]4:93189624]T\t32\tPASS\tEVDNC=ASSMB;INSERTION=ATCAAATATCAAAAATCATATATCAAATATCATATATTCAAATATCACTTAGTGA;MAPQ=60;MATEID=242967:1;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_4_93173501_93198501_25C;SPAN=1960;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:38:32.3:32.3,0,62:13:0:-32.23:32.79\n4\t93378383\t243022:2\tT\tT[4:83695488[\t52\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=ACCTTGT;MAPQ=60;MATEID=243022:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_4_93369501_93394501_6C;SPAN=9682895;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:16:18:4.8:52.8,4.8,0:10:11:-51.41:51.41\n4\t93638303\t243080:1\tT\tT[4:93644340[\t29\tPASS\tEVDNC=ASSMB;HOMSEQ=TAAAACTTGCATCTT;MAPQ=60;MATEID=243080:2;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_4_93639001_93664001_46C;SPAN=6037;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:14:5.9:29,0,5.9:10:0:-29.91:29.91\n4\t93644340\t243080:2\tT\t]4:93638303]T\t29\tPASS\tEVDNC=ASSMB;HOMSEQ=TAAAACTTGCATCTT;MAPQ=60;MATEID=243080:1;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_4_93639001_93664001_46C;SPAN=6037;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:14:5.9:29,0,5.9:10:0:-29.91:29.91\n4\t94597407\t390417:1\tT\t]7:46865077]T\t89\tPASS\tDISC_MAPQ=57;EVDNC=ASDIS;INSERTION=TTTTTTTTTTTT;MAPQ=60;MATEID=390417:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_46844001_46869001_64C;SPAN=-1;SUBN=5;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:30:36:0:89.1,0,0:10:25:-94.04:94.04\n4\t94597595\t390418:1\tC\tC[7:46865061[\t99\tPASS\tEVDNC=ASSMB;HOMSEQ=GAAGCC;MAPQ=60;MATEID=390418:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_46844001_46869001_107C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:40:30:11.1:122.1,11.1,0:40:0:-122.1:122.1\n4\t94716594\t243382:1\tT\tT[4:94717511[\t56\tPASS\tEVDNC=ASSMB;HOMSEQ=ATTTT;MAPQ=60;MATEID=243382:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_4_94717001_94742001_52C;SPAN=917;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:19:8:5.1:56.1,5.1,0:19:0:-56.11:56.11\n4\t94717511\t243382:2\tA\t]4:94716594]A\t56\tPASS\tEVDNC=ASSMB;HOMSEQ=ATTTT;MAPQ=60;MATEID=243382:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_4_94717001_94742001_52C;SPAN=917;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:19:8:5.1:56.1,5.1,0:19:0:-56.11:56.11\n4\t94949314\t243471:1\tT\tT[4:94949616[\t11\tPASS\tEVDNC=ASSMB;HOMSEQ=TGAACTCATTCTTTTTT;MAPQ=60;MATEID=243471:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_94937501_94962501_90C;SPAN=302;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:6:29:11.6:11.6,0,61.1:6:0:-11.65:13.59\n4\t94949616\t243471:2\tT\t]4:94949314]T\t11\tPASS\tEVDNC=ASSMB;HOMSEQ=TGAACTCATTCTTTTTT;MAPQ=60;MATEID=243471:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_94937501_94962501_90C;SPAN=302;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:6:29:11.6:11.6,0,61.1:6:0:-11.65:13.59\n4\t97127128\t245757:1\tC\t]4:103789730]C\t28\tPASS\tEVDNC=ASSMB;HOMSEQ=CA;MAPQ=60;MATEID=245757:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_103782001_103807001_54C;SPAN=6662602;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:15:8.9:28.7,0,8.9:10:0:-29.37:29.37\n4\t97127269\t483259:1\tA\tA[9:584229[\t30\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=A;MAPQ=60;MATEID=483259:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_563501_588501_1C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:22:23.6:30.2,0,23.6:6:5:-30.15:30.15\n4\t100380547\t161281:2\tA\t]3:47825187]A\t26\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=161281:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=3:47825187(+)-4:100380547(-)__3_47824001_47849001D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:9:5:2.4:26.4,2.4,0:0:9:-26.41:26.41\n4\t100603230\t161208:2\tC\tC[3:47737029[\t32\tPASS\tEVDNC=ASSMB;HOMSEQ=ACC;MAPQ=60;MATEID=161208:1;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_3_47726001_47751001_8C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:15:5.6:32,0,5.6:11:0:-33.15:33.15\n4\t100830780\t245066:1\tC\tC[4:100831103[\t37\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=GAC;MAPQ=60;MATEID=245066:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_100817501_100842501_163C;SPAN=323;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:19:8:37.7,0,8:11:4:-38.44:38.44\n4\t100831103\t245066:2\tG\t]4:100830780]G\t37\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=GAC;MAPQ=60;MATEID=245066:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_100817501_100842501_163C;SPAN=323;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:19:8:37.7,0,8:11:4:-38.44:38.44\n4\t102408341\t245468:1\tT\tT[4:102410994[\t33\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=245468:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=4:102408341(+)-4:102410994(-)__4_102410001_102435001D;SPAN=2653;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:10:11:3:33,3,0:0:10:-32.46:32.46\n4\t102410994\t245468:2\tC\t]4:102408341]C\t33\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=245468:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=4:102408341(+)-4:102410994(-)__4_102410001_102435001D;SPAN=2653;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:10:11:3:33,3,0:0:10:-32.46:32.46\n4\t103789730\t245757:2\tA\tA[4:97127128[\t28\tPASS\tEVDNC=ASSMB;HOMSEQ=CA;MAPQ=60;MATEID=245757:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_103782001_103807001_54C;SPAN=6662602;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:15:8.9:28.7,0,8.9:10:0:-29.37:29.37\n4\t103972889\t245845:1\tG\tG[4:103973524[\t42\tPASS\tEVDNC=ASSMB;INSERTION=TAT;MAPQ=60;MATEID=245845:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_103953501_103978501_3C;SPAN=635;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:15:25:19.4:42.5,0,19.4:15:0:-42.9:42.9\n4\t103973524\t245845:2\tT\t]4:103972889]T\t42\tPASS\tEVDNC=ASSMB;INSERTION=TAT;MAPQ=60;MATEID=245845:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_103953501_103978501_3C;SPAN=635;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:15:25:19.4:42.5,0,19.4:15:0:-42.9:42.9\n4\t105316751\t246193:1\tG\tG[4:105317024[\t85\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=246193:2;MATENM=0;NM=3;NUMPARTS=2;SCTG=c_4_105301001_105326001_127C;SPAN=273;SUBN=1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:28:19:7.8:85.8,7.8,0:28:0:-85.82:85.82\n4\t105317024\t246193:2\tA\t]4:105316751]A\t85\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=246193:1;MATENM=3;NM=0;NUMPARTS=2;SCTG=c_4_105301001_105326001_127C;SPAN=273;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:28:19:7.8:85.8,7.8,0:28:0:-85.82:85.82\n4\t105671656\t476702:1\tA\t]8:129429764]A\t57\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=A;MAPQ=60;MATEID=476702:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_129409001_129434001_125C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:20:30:17.9:57.5,0,17.9:13:9:-58.74:58.74\n4\t105671811\t489643:1\tT\tT]9:30288439]\t56\tPASS\tDISC_MAPQ=59;EVDNC=ASDIS;HOMSEQ=ATGT;MAPQ=60;MATEID=489643:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_30282001_30307001_56C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:19:10:5.1:56.1,5.1,0:14:5:-56.11:56.11\n4\t105905762\t246472:1\tT\t]4:106155800]T\t62\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;MAPQ=60;MATEID=246472:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_106134001_106159001_24C;SPAN=250038;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:21:25:0.3:62.7,0.3,0:17:11:-66.01:66.01\n4\t106135421\t246475:1\tC\tC[4:106142206[\t99\tPASS\tEVDNC=ASSMB;INSERTION=CA;MAPQ=60;MATEID=246475:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_106134001_106159001_1C;SPAN=6785;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:36:43:1.1:106.7,0,1.1:36:0:-113:113\n4\t106142206\t246475:2\tA\t]4:106135421]A\t99\tPASS\tEVDNC=ASSMB;INSERTION=CA;MAPQ=60;MATEID=246475:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_106134001_106159001_1C;SPAN=6785;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:36:43:1.1:106.7,0,1.1:36:0:-113:113\n4\t106155800\t246472:2\tG\tG[4:105905762[\t62\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;MAPQ=60;MATEID=246472:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_106134001_106159001_24C;SPAN=250038;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:21:25:0.3:62.7,0.3,0:17:11:-66.01:66.01\n4\t106683143\t246663:1\tA\tA[4:106688097[\t34\tPASS\tEVDNC=ASSMB;HOMSEQ=AATA;MAPQ=60;MATEID=246663:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_4_106673001_106698001_2C;SPAN=4954;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:29:34.7:34.7,0,38:13:0:-34.76:34.77\n4\t106688097\t246663:2\tA\t]4:106683143]A\t34\tPASS\tEVDNC=ASSMB;HOMSEQ=AATA;MAPQ=60;MATEID=246663:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_4_106673001_106698001_2C;SPAN=4954;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:29:34.7:34.7,0,38:13:0:-34.76:34.77\n4\t107206671\t246762:1\tT\tT[4:107210558[\t79\tPASS\tEVDNC=ASSMB;HOMSEQ=AAAACATTAGGATTCTCTTT;MAPQ=60;MATEID=246762:2;MATENM=3;NM=1;NUMPARTS=2;SCTG=c_4_107187501_107212501_28C;SPAN=3887;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:26:16:7.2:79.2,7.2,0:26:0:-79.22:79.22\n4\t107210558\t246762:2\tA\t]4:107206671]A\t79\tPASS\tEVDNC=ASSMB;HOMSEQ=AAAACATTAGGATTCTCTTT;MAPQ=60;MATEID=246762:1;MATENM=1;NM=3;NUMPARTS=2;SCTG=c_4_107187501_107212501_28C;SPAN=3887;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:26:16:7.2:79.2,7.2,0:26:0:-79.22:79.22\n4\t107355664\t246824:1\tC\tC[4:107358347[\t52\tPASS\tDISC_MAPQ=56;EVDNC=DSCRD;IMPRECISE;MAPQ=56;MATEID=246824:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=4:107355664(+)-4:107358347(-)__4_107334501_107359501D;SPAN=2683;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:19:38:42.2:52.1,0,42.2:0:19:-52.08:52.08\n4\t107358347\t246824:2\tA\t]4:107355664]A\t52\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=246824:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=4:107355664(+)-4:107358347(-)__4_107334501_107359501D;SPAN=2683;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:19:38:42.2:52.1,0,42.2:0:19:-52.08:52.08\n4\t108186534\t247086:1\tT\tT[4:108186820[\t39\tPASS\tEVDNC=ASSMB;HOMSEQ=AATGTTTGTATTTTTT;MAPQ=60;MATEID=247086:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_4_108167501_108192501_68C;SPAN=286;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:25:22.7:39.2,0,22.7:14:0:-39.39:39.39\n4\t108186820\t247086:2\tA\t]4:108186534]A\t39\tPASS\tEVDNC=ASSMB;HOMSEQ=AATGTTTGTATTTTTT;MAPQ=60;MATEID=247086:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_4_108167501_108192501_68C;SPAN=286;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:25:22.7:39.2,0,22.7:14:0:-39.39:39.39\n4\t109577601\t247504:1\tT\tT[4:109577910[\t99\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=GGGTACTTGAATTCTTT;MAPQ=60;MATEID=247504:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_109564001_109589001_83C;SPAN=309;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:33:25:9:99,9,0:23:12:-99.02:99.02\n4\t109577910\t247504:2\tG\t]4:109577601]G\t99\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=GGGTACTTGAATTCTTT;MAPQ=60;MATEID=247504:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_109564001_109589001_83C;SPAN=309;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:33:25:9:99,9,0:23:12:-99.02:99.02\n4\t111438522\t468851:1\tC\t]8:108770582]C\t15\tPASS\tDISC_MAPQ=54;EVDNC=DSCRD;IMPRECISE;MAPQ=54;MATEID=468851:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=4:111438522(-)-8:108770582(+)__8_108755501_108780501D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:50:15.8:15.8,0,108.2:0:9:-15.65:19.78\n4\t111533683\t248239:1\tT\t]4:111641927]T\t24\tPASS\tEVDNC=ASSMB;HOMSEQ=T;MAPQ=60;MATEID=248239:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_111622001_111647001_72C;SPAN=108244;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:29:24.8:24.8,0,47.9:10:0:-24.86:25.27\n4\t111641927\t248239:2\tT\tT[4:111533683[\t24\tPASS\tEVDNC=ASSMB;HOMSEQ=T;MAPQ=60;MATEID=248239:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_111622001_111647001_72C;SPAN=108244;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:29:24.8:24.8,0,47.9:10:0:-24.86:25.27\n4\t112548833\t248540:1\tG\tG[4:112549126[\t34\tPASS\tEVDNC=ASSMB;HOMSEQ=AAAAATGTAAAGATG;MAPQ=60;MATEID=248540:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_4_112528501_112553501_80C;SPAN=293;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:19:11.3:34.4,0,11.3:12:0:-34.76:34.76\n4\t112549126\t248540:2\tA\t]4:112548833]A\t34\tPASS\tEVDNC=ASSMB;HOMSEQ=AAAAATGTAAAGATG;MAPQ=60;MATEID=248540:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_4_112528501_112553501_80C;SPAN=293;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:19:11.3:34.4,0,11.3:12:0:-34.76:34.76\n4\t113213952\t248806:1\tT\tT[4:113214422[\t41\tPASS\tEVDNC=ASSMB;HOMSEQ=CAAAATGCTGTTTTAT;MAPQ=60;MATEID=248806:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_4_113190001_113215001_103C;SPAN=470;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:15:28:28.4:41.6,0,28.4:15:0:-41.77:41.77\n4\t113214422\t248806:2\tC\t]4:113213952]C\t41\tPASS\tEVDNC=ASSMB;HOMSEQ=CAAAATGCTGTTTTAT;MAPQ=60;MATEID=248806:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_4_113190001_113215001_103C;SPAN=470;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:15:28:28.4:41.6,0,28.4:15:0:-41.77:41.77\n4\t113796061\t252066:1\tG\t]4:124022062]G\t52\tPASS\tDISC_MAPQ=24;EVDNC=ASDIS;MAPQ=54;MATEID=252066:2;MATENM=0;NM=3;NUMPARTS=2;SCTG=c_4_124019001_124044001_132C;SPAN=10226001;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:16:18:4.8:52.8,4.8,0:11:8:-51.41:51.41\n4\t113846014\t248969:1\tG\tG]8:91873626]\t20\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=GG;MAPQ=60;MATEID=248969:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_4_113827001_113852001_31C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:33:20.6:20.6,0,60.2:7:4:-20.43:21.63\n4\t113846014\t261406:1\tG\tG[4:151810203[\t39\tPASS\tDISC_MAPQ=60;EVDNC=TSI_G;HOMSEQ=GG;INSERTION=GGTTTTCTAGATATACAATCATGTCATCTGCAAACAGGGACAATTTGACTCTTCTTTTCCTAATTGAATACCCTTTATTTCCTTCTCCTGCGTAATTGCCCTGGCCAGAACTTC;MAPQ=60;MATEID=261406:2;MATENM=0;NM=0;NUMPARTS=3;SCTG=c_4_151802001_151827001_73C;SPAN=37964189;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:24:19.7:39.5,0,19.7:11:3:-39.77:39.77\n4\t114253972\t249114:1\tA\tA[4:114262680[\t92\tPASS\tEVDNC=ASSMB;HOMSEQ=AAA;MAPQ=60;MATEID=249114:2;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_4_114243501_114268501_14C;SPAN=8708;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:31:11:8.4:92.4,8.4,0:31:0:-92.42:92.42\n4\t114262680\t249114:2\tA\t]4:114253972]A\t92\tPASS\tEVDNC=ASSMB;HOMSEQ=AAA;MAPQ=60;MATEID=249114:1;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_4_114243501_114268501_14C;SPAN=8708;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:31:11:8.4:92.4,8.4,0:31:0:-92.42:92.42\n4\t116186292\t271163:1\tG\tG[4:188802177[\t19\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=271163:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_4_188797001_188822001_5C;SPAN=72615885;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:7:3:1.8:19.8,1.8,0:7:0:-19.8:19.8\n4\t116655850\t260549:1\tA\t[4:149264903[A\t32\tPASS\tDISC_MAPQ=37;EVDNC=DSCRD;IMPRECISE;MAPQ=37;MATEID=260549:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=4:116655850(-)-4:149264903(-)__4_149254001_149279001D;SPAN=32609053;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:25:29.3:32.6,0,29.3:0:12:-32.59:32.59\n4\t116722508\t464088:1\tA\t]8:96174456]A\t44\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;MAPQ=60;MATEID=464088:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_96162501_96187501_12C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:16:28:25.1:44.9,0,25.1:10:11:-45.23:45.23\n4\t116723100\t249870:1\tT\tT]4:124757819]\t21\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=249870:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=4:116723100(+)-4:124757819(+)__4_116718001_116743001D;SPAN=8034719;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:17:18.5:21.8,0,18.5:0:8:-21.63:21.63\n4\t116923084\t13030:2\tT\t]1:53954398]T\t0\tPASS\tEVDNC=ASSMB;HOMSEQ=TATTTCAT;MAPQ=60;MATEID=13030:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_1_53949001_53974001_46C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/0:7:98:4.2:0,4.2,254.1:7:0:4.44:12.39\n4\t117217096\t485469:1\tT\t]9:10098711]T\t23\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=485469:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=4:117217096(-)-9:10098711(+)__9_10094001_10119001D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:8:7:2.1:23.1,2.1,0:0:8:-23.11:23.11\n4\t117217097\t258447:1\tA\t[4:142696557[A\t25\tPASS\tDISC_MAPQ=60;EVDNC=TSI_L;MAPQ=60;MATEID=258447:2;MATENM=0;NM=1;NUMPARTS=3;SCTG=c_4_142688001_142713001_26C;SPAN=25479460;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:28:25.1:25.1,0,44.9:9:2:-25.14:25.46\n4\t117766935\t250231:1\tT\tT[4:117767341[\t15\tPASS\tEVDNC=ASSMB;HOMSEQ=TTT;MAPQ=60;MATEID=250231:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_4_117747001_117772001_1C;SPAN=406;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:7:28:15.2:15.2,0,54.8:7:0:-15.24:16.51\n4\t117767341\t250231:2\tT\t]4:117766935]T\t15\tPASS\tEVDNC=ASSMB;HOMSEQ=TTT;MAPQ=60;MATEID=250231:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_4_117747001_117772001_1C;SPAN=406;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:7:28:15.2:15.2,0,54.8:7:0:-15.24:16.51\n4\t118375200\t250416:1\tT\tT[4:118375524[\t0\tPASS\tEVDNC=ASSMB;HOMSEQ=GTCTTTCATTGTT;MAPQ=60;MATEID=250416:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_118359501_118384501_43C;SPAN=324;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/0:13:187:9.4:0,9.4,488.5:13:0:9.651:22.85\n4\t118375524\t250416:2\tG\t]4:118375200]G\t0\tPASS\tEVDNC=ASSMB;HOMSEQ=GTCTTTCATTGTT;MAPQ=60;MATEID=250416:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_118359501_118384501_43C;SPAN=324;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/0:13:187:9.4:0,9.4,488.5:13:0:9.651:22.85\n4\t119096097\t250629:1\tA\tA[4:119096401[\t75\tPASS\tEVDNC=ASSMB;HOMSEQ=AAAAGATGCTGCAATGA;MAPQ=60;MATEID=250629:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_119094501_119119501_15C;SPAN=304;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:25:14:6.9:75.9,6.9,0:25:0:-75.92:75.92\n4\t119096401\t250629:2\tA\t]4:119096097]A\t75\tPASS\tEVDNC=ASSMB;HOMSEQ=AAAAGATGCTGCAATGA;MAPQ=60;MATEID=250629:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_119094501_119119501_15C;SPAN=304;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:25:14:6.9:75.9,6.9,0:25:0:-75.92:75.92\n4\t119106089\t250638:1\tT\tT[4:119106426[\t72\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;INSERTION=AT;MAPQ=60;MATEID=250638:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_119094501_119119501_94C;SPAN=337;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:24:19:6.6:72.6,6.6,0:21:7:-72.62:72.62\n4\t119106426\t250638:2\tG\t]4:119106089]G\t72\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;INSERTION=AT;MAPQ=60;MATEID=250638:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_119094501_119119501_94C;SPAN=337;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:24:19:6.6:72.6,6.6,0:21:7:-72.62:72.62\n4\t120165938\t250909:1\tA\tA[4:120166138[\t20\tPASS\tEVDNC=ASSMB;HOMSEQ=AGCAGA;MAPQ=60;MATEID=250909:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_120148001_120173001_66C;SPAN=200;SUBN=2;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:22:20.3:20.3,0,33.5:8:0:-20.22:20.45\n4\t120166138\t250909:2\tA\t]4:120165938]A\t20\tPASS\tEVDNC=ASSMB;HOMSEQ=AGCAGA;MAPQ=60;MATEID=250909:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_120148001_120173001_66C;SPAN=200;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:22:20.3:20.3,0,33.5:8:0:-20.22:20.45\n4\t120167449\t250918:1\tA\t]4:120175328]A\t19\tPASS\tEVDNC=ASSMB;HOMSEQ=AT;MAPQ=60;MATEID=250918:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_120172501_120197501_1C;SPAN=7879;SUBN=2;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:7:13:12.8:19.4,0,12.8:7:0:-19.51:19.51\n4\t120175328\t250918:2\tT\tT[4:120167449[\t19\tPASS\tEVDNC=ASSMB;HOMSEQ=AT;MAPQ=60;MATEID=250918:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_120172501_120197501_1C;SPAN=7879;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:7:13:12.8:19.4,0,12.8:7:0:-19.51:19.51\n4\t120887787\t251139:1\tT\tT[4:120888092[\t27\tPASS\tEVDNC=ASSMB;HOMSEQ=GACATTTTATCCT;MAPQ=60;MATEID=251139:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_4_120883001_120908001_97C;SPAN=305;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:21:23.9:27.2,0,23.9:10:0:-27.11:27.11\n4\t120888092\t251139:2\tG\t]4:120887787]G\t27\tPASS\tEVDNC=ASSMB;HOMSEQ=GACATTTTATCCT;MAPQ=60;MATEID=251139:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_4_120883001_120908001_97C;SPAN=305;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:21:23.9:27.2,0,23.9:10:0:-27.11:27.11\n4\t122720683\t469240:1\tA\t]8:109517001]A\t28\tPASS\tEVDNC=ASSMB;HOMSEQ=A;MAPQ=60;MATEID=469240:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_109515001_109540001_59C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:53:28.1:28.1,0,104:13:0:-28.02:30.54\n4\t122721082\t262618:1\tA\tA[4:155292496[\t34\tPASS\tEVDNC=ASSMB;HOMSEQ=A;MAPQ=60;MATEID=262618:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_155281001_155306001_83C;SPAN=32571414;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:29:34.7:34.7,0,38:13:0:-34.76:34.77\n4\t123908850\t252028:1\tA\t]4:123909098]A\t19\tPASS\tEVDNC=ASSMB;INSERTION=CAGTGGCAATTC;MAPQ=60;MATEID=252028:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_4_123896501_123921501_67C;SPAN=248;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:49:19.4:19.4,0,101.9:10:0:-19.24:22.58\n4\t123909098\t252028:2\tC\tC[4:123908850[\t19\tPASS\tEVDNC=ASSMB;INSERTION=CAGTGGCAATTC;MAPQ=60;MATEID=252028:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_4_123896501_123921501_67C;SPAN=248;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:49:19.4:19.4,0,101.9:10:0:-19.24:22.58\n4\t124019638\t459008:1\tA\t]8:78595007]A\t49\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AT;MAPQ=60;MATEID=459008:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_78571501_78596501_14C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:15:17:4.5:49.5,4.5,0:12:8:-48.04:48.04\n4\t124022062\t252066:2\tT\tT[4:113796061[\t52\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;MAPQ=60;MATEID=252066:1;MATENM=3;NM=0;NUMPARTS=2;SCTG=c_4_124019001_124044001_132C;SPAN=10226001;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:16:18:4.8:52.8,4.8,0:11:8:-51.41:51.41\n4\t124022412\t252074:1\tT\tT[4:124024032[\t56\tPASS\tEVDNC=ASSMB;HOMSEQ=CATTACATACTTTAT;MAPQ=60;MATEID=252074:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_124019001_124044001_143C;SPAN=1620;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:19:23:0.2:56.3,0,0.2:19:0:-59.38:59.38\n4\t124024032\t252074:2\tC\t]4:124022412]C\t56\tPASS\tEVDNC=ASSMB;HOMSEQ=CATTACATACTTTAT;MAPQ=60;MATEID=252074:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_124019001_124044001_143C;SPAN=1620;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:19:23:0.2:56.3,0,0.2:19:0:-59.38:59.38\n4\t124756824\t257428:1\tC\t[4:139693884[C\t82\tPASS\tDISC_MAPQ=60;EVDNC=TSI_G;HOMSEQ=AGGA;INSERTION=ACTCTTGTCCTTATTATTTCAGCTTGGCTAAAAGCCGTATTCCTTGTATGCTTTTATTGTTTTTCTGGTTCAACAAC;MAPQ=60;MATEID=257428:2;MATENM=0;NM=0;NUMPARTS=3;SCTG=c_4_139674501_139699501_7C;SPAN=14937060;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:25:27:7.5:82.5,7.5,0:22:6:-81.99:81.99\n4\t124756824\t489646:1\tC\t[9:30288228[C\t34\tPASS\tDISC_MAPQ=60;EVDNC=TSI_L;HOMSEQ=AGGA;INSERTION=AAC;MAPQ=60;MATEID=489646:2;MATENM=0;NM=0;NUMPARTS=3;REPSEQ=CAACAA;SCTG=c_9_30282001_30307001_59C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:16:25:11.3:34.7,0,11.3:16:2:-35.31:35.31\n4\t124757819\t249870:2\tA\tA]4:116723100]\t21\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=249870:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=4:116723100(+)-4:124757819(+)__4_116718001_116743001D;SPAN=8034719;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:17:18.5:21.8,0,18.5:0:8:-21.63:21.63\n4\t124870323\t252421:1\tC\t]4:125017418]C\t39\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=C;MAPQ=60;MATEID=252421:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_4_124999001_125024001_5C;SPAN=147095;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:24:19.7:39.5,0,19.7:10:9:-39.77:39.77\n4\t125017418\t252421:2\tC\tC[4:124870323[\t39\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=C;MAPQ=60;MATEID=252421:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_4_124999001_125024001_5C;SPAN=147095;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:24:19.7:39.5,0,19.7:10:9:-39.77:39.77\n4\t126064282\t476707:1\tT\t[8:129429474[T\t40\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=T;MAPQ=60;MATEID=476707:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_129409001_129434001_74C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:15:34:40.1:40.1,0,43.4:13:3:-39.96:39.98\n4\t127522065\t254786:1\tT\t]4:132470810]T\t41\tPASS\tDISC_MAPQ=255;EVDNC=TSI_G;HOMSEQ=T;INSERTION=AGAGTTACAGCATGAGAATTGCATAAACATTGCAAATGCAAAGAAGGACATGTTATTTGCTCCAAGATAGCAGAGATTTCTCCTAGCA;MAPQ=60;MATEID=254786:2;MATENM=0;NM=0;NUMPARTS=3;SCTG=c_4_132447001_132472001_15C;SPAN=4948745;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:18:1.7:41.3,0,1.7:14:0:-42.92:42.92\n4\t127522207\t475363:1\tT\tT[8:126114017[\t20\tPASS\tEVDNC=ASSMB;HOMSEQ=CAT;MAPQ=60;MATEID=475363:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_126101501_126126501_8C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:35:20:20,0,66.2:9:0:-19.87:21.36\n4\t127800198\t261761:1\tC\t[4:152998534[C\t62\tPASS\tDISC_MAPQ=52;EVDNC=ASDIS;INSERTION=TTAATTAA;MAPQ=60;MATEID=261761:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_4_152978001_153003001_10C;SPAN=25198336;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:19:21:5.7:62.7,5.7,0:13:11:-61.54:61.54\n4\t129984083\t254011:1\tA\t]4:130048236]A\t27\tPASS\tEVDNC=ASSMB;INSERTION=TGTTGGAAAAAAT;MAPQ=60;MATEID=254011:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_130046001_130071001_25C;SPAN=64153;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:20:20.9:27.5,0,20.9:10:0:-27.41:27.41\n4\t130048236\t254011:2\tG\tG[4:129984083[\t27\tPASS\tEVDNC=ASSMB;INSERTION=TGTTGGAAAAAAT;MAPQ=48;MATEID=254011:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_130046001_130071001_25C;SPAN=64153;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:20:20.9:27.5,0,20.9:10:0:-27.41:27.41\n4\t130410267\t600538:1\tA\t]11:86686540]A\t30\tPASS\tDISC_MAPQ=21;EVDNC=DSCRD;IMPRECISE;MAPQ=21;MATEID=600538:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=4:130410267(-)-11:86686540(+)__11_86681001_86706001D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:22:23.6:30.2,0,23.6:0:11:-30.15:30.15\n4\t130736338\t254250:1\tA\t]4:130736502]A\t33\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=254250:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_130732001_130757001_16C;SPAN=164;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:44:33.8:33.8,0,76.7:14:0:-33.85:34.77\n4\t130736502\t254250:2\tA\tA[4:130736338[\t33\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=254250:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_130732001_130757001_16C;SPAN=164;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:44:33.8:33.8,0,76.7:14:0:-33.85:34.77\n4\t132259629\t254724:1\tT\tT[4:132261800[\t56\tPASS\tDISC_MAPQ=29;EVDNC=DSCRD;IMPRECISE;MAPQ=29;MATEID=254724:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=4:132259629(+)-4:132261800(-)__4_132251001_132276001D;SPAN=2171;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:19:7:5.1:56.1,5.1,0:0:19:-56.11:56.11\n4\t132261800\t254724:2\tG\t]4:132259629]G\t56\tPASS\tDISC_MAPQ=44;EVDNC=DSCRD;IMPRECISE;MAPQ=44;MATEID=254724:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=4:132259629(+)-4:132261800(-)__4_132251001_132276001D;SPAN=2171;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:19:7:5.1:56.1,5.1,0:0:19:-56.11:56.11\n4\t132470632\t259250:1\tA\t[4:145607336[A\t34\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;INSERTION=TCTAACCCAGACTA;MAPQ=60;MATEID=259250:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_4_145603501_145628501_39C;SPAN=13136704;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:19:11.3:34.4,0,11.3:7:6:-34.76:34.76\n4\t132470810\t254786:2\tA\tA[4:127522065[\t41\tPASS\tDISC_MAPQ=255;EVDNC=TSI_G;HOMSEQ=T;INSERTION=AGAGTTACAGCATGAGAATTGCATAAACATTGCAAATGCAAAGAAGGACATGTTATTTGCTCCAAGATAGCAGAGATTTCTCCTAGCA;MAPQ=60;MATEID=254786:1;MATENM=0;NM=0;NUMPARTS=3;SCTG=c_4_132447001_132472001_15C;SPAN=4948745;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:18:1.7:41.3,0,1.7:14:0:-42.92:42.92\n4\t132470810\t242661:2\tA\tA[4:91668387[\t25\tPASS\tDISC_MAPQ=60;EVDNC=TSI_L;MAPQ=60;MATEID=242661:1;MATENM=0;NM=0;NUMPARTS=3;SCTG=c_4_91654501_91679501_22C;SPAN=40802423;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:26:25.7:25.7,0,38.9:9:3:-25.7:25.87\n4\t132524277\t254804:1\tA\tA[4:132524547[\t49\tPASS\tEVDNC=ASSMB;HOMSEQ=A;MAPQ=60;MATEID=254804:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_132520501_132545501_115C;SPAN=270;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:17:23:6.8:49.7,0,6.8:17:0:-51.34:51.34\n4\t132524547\t254804:2\tA\t]4:132524277]A\t49\tPASS\tEVDNC=ASSMB;HOMSEQ=A;MAPQ=60;MATEID=254804:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_132520501_132545501_115C;SPAN=270;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:17:23:6.8:49.7,0,6.8:17:0:-51.34:51.34\n4\t132747922\t261326:1\tC\t[4:151538082[C\t67\tPASS\tDISC_MAPQ=57;EVDNC=TSI_G;HOMSEQ=AG;INSERTION=TGGGAAGCAGGGAATTGCTGCTGGAAAGACAACCAGATCATGTCTGCCATAGTGCTCAAAGAAAAATAATTTTAAAGTTACAGAAA;MAPQ=60;MATEID=261326:2;MATENM=0;NM=0;NUMPARTS=3;SCTG=c_4_151532501_151557501_28C;SPAN=18790160;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:23:30:8:67.4,0,8:16:10:-70.2:70.2\n4\t133109854\t255045:1\tT\t]4:133181023]T\t34\tPASS\tEVDNC=ASSMB;HOMSEQ=T;MAPQ=60;MATEID=255045:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_133157501_133182501_52C;SPAN=71169;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:20:14.3:34.1,0,14.3:12:0:-34.32:34.32\n4\t133181023\t255045:2\tT\tT[4:133109854[\t34\tPASS\tEVDNC=ASSMB;HOMSEQ=T;MAPQ=60;MATEID=255045:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_133157501_133182501_52C;SPAN=71169;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:20:14.3:34.1,0,14.3:12:0:-34.32:34.32\n4\t133374405\t255133:1\tT\tT[4:133374709[\t59\tPASS\tEVDNC=ASSMB;HOMSEQ=ATAAATTTGTATTTTTT;MAPQ=60;MATEID=255133:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_133353501_133378501_4C;SPAN=304;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:19:22:2.7:59.4,2.7,0:19:0:-60.34:60.34\n4\t133374709\t255133:2\tA\t]4:133374405]A\t59\tPASS\tEVDNC=ASSMB;HOMSEQ=ATAAATTTGTATTTTTT;MAPQ=60;MATEID=255133:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_133353501_133378501_4C;SPAN=304;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:19:22:2.7:59.4,2.7,0:19:0:-60.34:60.34\n4\t133589596\t480393:1\tC\t[8:138632595[C\t17\tPASS\tDISC_MAPQ=56;EVDNC=ASDIS;HOMSEQ=C;MAPQ=60;MATEID=480393:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_8_138621001_138646001_7C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:32:17.6:17.6,0,60.5:6:3:-17.41:18.87\n4\t133589882\t255192:1\tG\tG]6:35915816]\t22\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=255192:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=4:133589882(+)-6:35915816(+)__4_133574001_133599001D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:15:15.5:22.1,0,15.5:0:8:-22.25:22.25\n4\t134233891\t255396:1\tA\t[4:134237140[A\t52\tPASS\tDISC_MAPQ=44;EVDNC=ASDIS;INSERTION=ACTTTATACAAATGGAGAA;MAPQ=60;MATEID=255396:2;MATENM=0;NM=4;NUMPARTS=2;SCTG=c_4_134235501_134260501_0C;SPAN=3249;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:18:26:12.5:52.1,0,12.5:14:9:-53.39:53.39\n4\t134237140\t255396:2\tT\t[4:134233891[T\t52\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;INSERTION=ACTTTATACAAATGGAGAA;MAPQ=60;MATEID=255396:1;MATENM=4;NM=0;NUMPARTS=2;SCTG=c_4_134235501_134260501_0C;SPAN=3249;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:18:26:12.5:52.1,0,12.5:14:9:-53.39:53.39\n4\t134345929\t255721:1\tG\t]4:134988026]G\t16\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=255721:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_134970501_134995501_166C;SPAN=642097;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:7:25:16.1:16.1,0,45.8:7:0:-16.08:16.92\n4\t134511847\t255539:1\tA\tA[4:134514547[\t44\tPASS\tEVDNC=ASSMB;INSERTION=GTACA;MAPQ=60;MATEID=255539:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_134505001_134530001_17C;SPAN=2700;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:17:40:44.9:44.9,0,54.8:17:0:-44.87:44.94\n4\t134514547\t255539:2\tT\t]4:134511847]T\t44\tPASS\tEVDNC=ASSMB;INSERTION=GTACA;MAPQ=60;MATEID=255539:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_134505001_134530001_17C;SPAN=2700;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:17:40:44.9:44.9,0,54.8:17:0:-44.87:44.94\n4\t134969975\t259711:1\tG\t[4:147282100[G\t46\tPASS\tDISC_MAPQ=255;EVDNC=ASDIS;INSERTION=AATGAG;MAPQ=60;MATEID=259711:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_147269501_147294501_1C;SPAN=12312125;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:16:24:13.1:46.1,0,13.1:9:12:-46.99:46.99\n4\t134988026\t255721:2\tG\tG[4:134345929[\t16\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=255721:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_134970501_134995501_166C;SPAN=642097;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:7:25:16.1:16.1,0,45.8:7:0:-16.08:16.92\n4\t135006396\t255745:1\tG\tG[4:135006703[\t82\tPASS\tEVDNC=ASSMB;HOMSEQ=AAAACTGCTATACAG;MAPQ=60;MATEID=255745:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_134995001_135020001_94C;SPAN=307;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:27:32:2.1:82.5,2.1,0:27:0:-85.01:85.01\n4\t135006703\t255745:2\tA\t]4:135006396]A\t82\tPASS\tEVDNC=ASSMB;HOMSEQ=AAAACTGCTATACAG;MAPQ=60;MATEID=255745:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_134995001_135020001_94C;SPAN=307;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:27:32:2.1:82.5,2.1,0:27:0:-85.01:85.01\n4\t135169406\t505978:1\tT\t[9:94543397[T\t22\tPASS\tDISC_MAPQ=21;EVDNC=DSCRD;IMPRECISE;MAPQ=21;MATEID=505978:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=4:135169406(-)-9:94543397(-)__9_94521001_94546001D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:14:12.5:22.4,0,12.5:0:8:-22.62:22.62\n4\t135304935\t692387:1\tA\tA[14:37047457[\t21\tPASS\tEVDNC=ASSMB;INSERTION=TG;MAPQ=60;MATEID=692387:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_37044001_37069001_19C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:17:18.5:21.8,0,18.5:8:0:-21.63:21.63\n4\t137443236\t262665:1\tA\t[4:155418929[A\t17\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;MAPQ=60;MATEID=262665:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_155403501_155428501_47C;SPAN=17975693;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:7:19:17.9:17.9,0,27.8:6:2:-17.77:17.94\n4\t138045057\t256843:1\tG\tG[4:138046065[\t99\tPASS\tEVDNC=ASSMB;INSERTION=T;MAPQ=60;MATEID=256843:2;MATENM=3;NM=9;NUMPARTS=2;SCTG=c_4_138033001_138058001_16C;SPAN=1008;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:48:24:13.2:145.2,13.2,0:48:0:-145.2:145.2\n4\t138046065\t256843:2\tA\t]4:138045057]A\t99\tPASS\tEVDNC=ASSMB;INSERTION=T;MAPQ=60;MATEID=256843:1;MATENM=9;NM=3;NUMPARTS=2;SCTG=c_4_138033001_138058001_16C;SPAN=1008;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:48:24:13.2:145.2,13.2,0:48:0:-145.2:145.2\n4\t138547813\t257017:1\tA\tA[4:138552061[\t61\tPASS\tDISC_MAPQ=52;EVDNC=DSCRD;IMPRECISE;MAPQ=52;MATEID=257017:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=4:138547813(+)-4:138552061(-)__4_138547501_138572501D;SPAN=4248;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:41:263:61.6:61.6,0,599.6:0:41:-61.41:87.27\n4\t138552061\t257017:2\tA\t]4:138547813]A\t61\tPASS\tDISC_MAPQ=50;EVDNC=DSCRD;IMPRECISE;MAPQ=50;MATEID=257017:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=4:138547813(+)-4:138552061(-)__4_138547501_138572501D;SPAN=4248;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:41:263:61.6:61.6,0,599.6:0:41:-61.41:87.27\n4\t139693884\t257428:2\tT\t[4:124756824[T\t82\tPASS\tDISC_MAPQ=60;EVDNC=TSI_G;HOMSEQ=AGGA;INSERTION=ACTCTTGTCCTTATTATTTCAGCTTGGCTAAAAGCCGTATTCCTTGTATGCTTTTATTGTTTTTCTGGTTCAACAAC;MAPQ=60;MATEID=257428:1;MATENM=0;NM=0;NUMPARTS=3;SCTG=c_4_139674501_139699501_7C;SPAN=14937060;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:25:27:7.5:82.5,7.5,0:22:6:-81.99:81.99\n4\t139694008\t464091:1\tA\tA[8:96173027[\t31\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=464091:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_96162501_96187501_54C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:17:8.6:31.7,0,8.6:11:0:-32.06:32.06\n4\t139733131\t477489:1\tG\t]8:131152906]G\t31\tPASS\tEVDNC=ASSMB;INSERTION=ATCTGCATTTTT;MAPQ=60;MATEID=477489:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_131148501_131173501_29C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:31:31.1:31.1,0,44.3:12:0:-30.9:31.08\n4\t139735224\t257457:1\tT\tT[4:153212136[\t23\tPASS\tEVDNC=ASSMB;HOMSEQ=T;MAPQ=60;MATEID=257457:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_139723501_139748501_83C;SPAN=13476912;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:7:8:2.1:23.1,2.1,0:7:0:-22.34:22.34\n4\t139854667\t257492:1\tC\t]4:139854797]C\t23\tPASS\tEVDNC=ASSMB;INSERTION=GCTCTC;MAPQ=60;MATEID=257492:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_139846001_139871001_88C;SPAN=130;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:58:23.3:23.3,0,122.3:12:0:-23.31:27.18\n4\t139854797\t257492:2\tC\tC[4:139854667[\t23\tPASS\tEVDNC=ASSMB;INSERTION=GCTCTC;MAPQ=60;MATEID=257492:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_139846001_139871001_88C;SPAN=130;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:58:23.3:23.3,0,122.3:12:0:-23.31:27.18\n4\t140519225\t257763:1\tC\tC[4:140520652[\t31\tPASS\tDISC_MAPQ=24;EVDNC=DSCRD;IMPRECISE;MAPQ=24;MATEID=257763:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=4:140519225(+)-4:140520652(-)__4_140507501_140532501D;SPAN=1427;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:31:31.1:31.1,0,44.3:0:12:-30.9:31.08\n4\t140520652\t257763:2\tA\t]4:140519225]A\t31\tPASS\tDISC_MAPQ=28;EVDNC=DSCRD;IMPRECISE;MAPQ=28;MATEID=257763:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=4:140519225(+)-4:140520652(-)__4_140507501_140532501D;SPAN=1427;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:31:31.1:31.1,0,44.3:0:12:-30.9:31.08\n4\t141260745\t479452:1\tG\t]8:136646564]G\t24\tPASS\tDISC_MAPQ=55;EVDNC=ASDIS;HOMSEQ=GAC;MAPQ=60;MATEID=479452:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_136636501_136661501_40C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:29:24.8:24.8,0,47.9:8:5:-24.86:25.27\n4\t141260902\t464688:1\tT\tT]8:98214711]\t27\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;INSERTION=AA;MAPQ=60;MATEID=464688:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_98196001_98221001_19C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:21:23.9:27.2,0,23.9:9:2:-27.11:27.11\n4\t141309629\t258016:1\tC\tC[4:141311909[\t60\tPASS\tEVDNC=ASSMB;HOMSEQ=GAGCC;MAPQ=60;MATEID=258016:2;MATENM=0;NM=3;NUMPARTS=2;SCTG=c_4_141291501_141316501_90C;SPAN=2280;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:21:30:14.6:60.8,0,14.6:21:0:-62.47:62.47\n4\t141311909\t258016:2\tG\t]4:141309629]G\t60\tPASS\tEVDNC=ASSMB;HOMSEQ=GAGCC;MAPQ=60;MATEID=258016:1;MATENM=3;NM=0;NUMPARTS=2;SCTG=c_4_141291501_141316501_90C;SPAN=2280;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:21:30:14.6:60.8,0,14.6:21:0:-62.47:62.47\n4\t141316353\t262006:1\tT\tT[4:153664092[\t23\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=262006:2;MATENM=1;NM=2;NUMPARTS=2;SCTG=c_4_153664001_153689001_70C;SPAN=12347739;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:34:23.6:23.6,0,59.9:10:0:-23.45:24.42\n4\t142164895\t258336:1\tT\t]4:142303352]T\t41\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=T;MAPQ=60;MATEID=258336:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_142296001_142321001_119C;SPAN=138457;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:15:31:34.4:41,0,34.4:11:10:-40.81:40.81\n4\t142231121\t258349:1\tC\t]4:142332597]C\t26\tPASS\tEVDNC=ASSMB;HOMSEQ=CA;MAPQ=60;MATEID=258349:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_4_142320501_142345501_26C;SPAN=101476;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:22:26.9:26.9,0,26.9:10:0:-26.83:26.83\n4\t142303352\t258336:2\tT\tT[4:142164895[\t41\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=T;MAPQ=60;MATEID=258336:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_142296001_142321001_119C;SPAN=138457;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:15:31:34.4:41,0,34.4:11:10:-40.81:40.81\n4\t142332597\t258349:2\tA\tA[4:142231121[\t26\tPASS\tEVDNC=ASSMB;HOMSEQ=CA;MAPQ=60;MATEID=258349:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_4_142320501_142345501_26C;SPAN=101476;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:22:26.9:26.9,0,26.9:10:0:-26.83:26.83\n4\t142696529\t479453:1\tC\t[8:136645913[C\t26\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=CT;MAPQ=60;MATEID=479453:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_136636501_136661501_10C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:24:26.3:26.3,0,32.9:10:2:-26.26:26.32\n4\t142696557\t258447:2\tC\t[4:117217097[C\t25\tPASS\tDISC_MAPQ=60;EVDNC=TSI_L;MAPQ=60;MATEID=258447:1;MATENM=1;NM=0;NUMPARTS=3;SCTG=c_4_142688001_142713001_26C;SPAN=25479460;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:28:25.1:25.1,0,44.9:9:2:-25.14:25.46\n4\t143652148\t258707:1\tT\tT[4:143652462[\t41\tPASS\tEVDNC=ASSMB;HOMSEQ=CTTTTTCCTTTCTT;MAPQ=60;MATEID=258707:2;MATENM=0;NM=6;NUMPARTS=2;SCTG=c_4_143643501_143668501_119C;SPAN=314;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:15:27:25.4:41.9,0,25.4:15:0:-42.12:42.12\n4\t143652462\t258707:2\tC\t]4:143652148]C\t41\tPASS\tEVDNC=ASSMB;HOMSEQ=CTTTTTCCTTTCTT;MAPQ=60;MATEID=258707:1;MATENM=6;NM=0;NUMPARTS=2;SCTG=c_4_143643501_143668501_119C;SPAN=314;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:15:27:25.4:41.9,0,25.4:15:0:-42.12:42.12\n4\t144395295\t258967:1\tC\tC[4:144398754[\t99\tPASS\tDISC_MAPQ=31;EVDNC=ASDIS;HOMSEQ=AC;MAPQ=26;MATEID=258967:2;MATENM=34;NM=1;NUMPARTS=2;SCTG=c_4_144378501_144403501_5C;SPAN=3459;SUBN=1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:65:19:18:198,18,0:47:32:-198:198\n4\t144398754\t258967:2\tA\t]4:144395295]A\t99\tPASS\tDISC_MAPQ=57;EVDNC=ASDIS;HOMSEQ=AC;MAPQ=60;MATEID=258967:1;MATENM=1;NM=34;NUMPARTS=2;SCTG=c_4_144378501_144403501_5C;SPAN=3459;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:65:19:18:198,18,0:47:32:-198:198\n4\t145517661\t259212:1\tA\tA[4:145519299[\t37\tPASS\tEVDNC=ASSMB;HOMSEQ=TTGGCCA;MAPQ=60;MATEID=259212:2;MATENM=9;NM=0;NUMPARTS=2;SCTG=c_4_145505501_145530501_34C;SPAN=1638;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:31:37.7:37.7,0,37.7:14:0:-37.5:37.51\n4\t145519299\t259212:2\tT\t]4:145517661]T\t37\tPASS\tEVDNC=ASSMB;HOMSEQ=TTGGCCA;MAPQ=60;MATEID=259212:1;MATENM=0;NM=9;NUMPARTS=2;SCTG=c_4_145505501_145530501_34C;SPAN=1638;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:31:37.7:37.7,0,37.7:14:0:-37.5:37.51\n4\t145607336\t259250:2\tG\t[4:132470632[G\t34\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;INSERTION=TCTAACCCAGACTA;MAPQ=60;MATEID=259250:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_4_145603501_145628501_39C;SPAN=13136704;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:19:11.3:34.4,0,11.3:7:6:-34.76:34.76\n4\t145607589\t489652:1\tG\tG[9:30288138[\t40\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=489652:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_30282001_30307001_41C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:22:13.7:40.1,0,13.7:14:0:-40.63:40.63\n4\t145607890\t479457:1\tT\tT[8:136646252[\t16\tPASS\tDISC_MAPQ=37;EVDNC=DSCRD;IMPRECISE;MAPQ=37;MATEID=479457:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=4:145607890(+)-8:136646252(-)__8_136636501_136661501D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:36:16.4:16.4,0,72.5:0:8:-16.29:18.4\n4\t145998429\t259347:1\tT\tT[4:146006589[\t99\tPASS\tEVDNC=ASSMB;HOMSEQ=CTT;MAPQ=60;MATEID=259347:2;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_4_145995501_146020501_17C;SPAN=8160;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:41:17:11.4:125.4,11.4,0:41:0:-125.4:125.4\n4\t146006589\t259347:2\tC\t]4:145998429]C\t99\tPASS\tEVDNC=ASSMB;HOMSEQ=CTT;MAPQ=60;MATEID=259347:1;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_4_145995501_146020501_17C;SPAN=8160;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:41:17:11.4:125.4,11.4,0:41:0:-125.4:125.4\n4\t146286440\t259415:1\tC\t]4:146287045]C\t20\tPASS\tDISC_MAPQ=39;EVDNC=DSCRD;IMPRECISE;MAPQ=39;MATEID=259415:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=4:146286440(-)-4:146287045(+)__4_146265001_146290001D;SPAN=605;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:67:20.9:20.9,0,146.3:0:12:-20.78:26.34\n4\t146287045\t259415:2\tT\tT[4:146286440[\t20\tPASS\tDISC_MAPQ=42;EVDNC=DSCRD;IMPRECISE;MAPQ=42;MATEID=259415:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=4:146286440(-)-4:146287045(+)__4_146265001_146290001D;SPAN=605;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:67:20.9:20.9,0,146.3:0:12:-20.78:26.34\n4\t147282100\t259711:2\tG\t[4:134969975[G\t46\tPASS\tDISC_MAPQ=55;EVDNC=ASDIS;INSERTION=AATGAG;MAPQ=60;MATEID=259711:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_147269501_147294501_1C;SPAN=12312125;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:16:24:13.1:46.1,0,13.1:9:12:-46.99:46.99\n4\t148637296\t717675:1\tC\tC[14:106249864[\t18\tPASS\tEVDNC=ASSMB;HOMSEQ=C;MAPQ=60;MATEID=717675:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_106232001_106257001_8C;SPAN=-1;SUBN=1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:39:18.8:18.8,0,78.2:9:0:-18.75:20.87\n4\t149239904\t260547:1\tA\tA[4:149240230[\t58\tPASS\tEVDNC=ASSMB;HOMSEQ=AAAACTGGGCTGCTCTA;MAPQ=60;MATEID=260547:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_149229501_149254501_71C;SPAN=326;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:20:26:5.9:58.7,0,5.9:20:0:-61.11:61.11\n4\t149240230\t260547:2\tA\t]4:149239904]A\t58\tPASS\tEVDNC=ASSMB;HOMSEQ=AAAACTGGGCTGCTCTA;MAPQ=60;MATEID=260547:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_149229501_149254501_71C;SPAN=326;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:20:26:5.9:58.7,0,5.9:20:0:-61.11:61.11\n4\t149264903\t260549:2\tT\t[4:116655850[T\t32\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=260549:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=4:116655850(-)-4:149264903(-)__4_149254001_149279001D;SPAN=32609053;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:25:29.3:32.6,0,29.3:0:12:-32.59:32.59\n4\t149321671\t260567:1\tT\tT[4:149322303[\t14\tPASS\tEVDNC=ASSMB;INSERTION=GTA;MAPQ=60;MATEID=260567:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_4_149303001_149328001_34C;SPAN=632;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:7:29:14.9:14.9,0,57.8:7:0:-14.96:16.39\n4\t149322303\t260567:2\tT\t]4:149321671]T\t14\tPASS\tEVDNC=ASSMB;INSERTION=GTA;MAPQ=60;MATEID=260567:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_4_149303001_149328001_34C;SPAN=632;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:7:29:14.9:14.9,0,57.8:7:0:-14.96:16.39\n4\t149687001\t260688:2\tA\t]1:53954236]A\t30\tPASS\tEVDNC=ASSMB;HOMSEQ=ACATAA;MAPQ=60;MATEID=260688:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_149670501_149695501_34C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:22:23.6:30.2,0,23.6:11:0:-30.15:30.15\n4\t149780119\t260717:1\tA\t]4:149807097]A\t23\tPASS\tEVDNC=ASSMB;INSERTION=AT;MAPQ=60;MATEID=260717:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_149793001_149818001_2C;SPAN=26978;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:24:23:23,0,36.2:9:0:-22.96:23.15\n4\t149807097\t260717:2\tA\tA[4:149780119[\t23\tPASS\tEVDNC=ASSMB;INSERTION=AT;MAPQ=60;MATEID=260717:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_149793001_149818001_2C;SPAN=26978;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:24:23:23,0,36.2:9:0:-22.96:23.15\n4\t150090161\t260794:1\tT\t]4:150090494]T\t14\tPASS\tEVDNC=ASSMB;HOMSEQ=TTTGGGA;MAPQ=60;MATEID=260794:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_150087001_150112001_35C;SPAN=333;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:42:14.6:14.6,0,90.5:8:0:-14.6:17.8\n4\t150090494\t260794:2\tA\tA[4:150090161[\t14\tPASS\tEVDNC=ASSMB;HOMSEQ=TTTGGGA;MAPQ=60;MATEID=260794:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_150087001_150112001_35C;SPAN=333;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:42:14.6:14.6,0,90.5:8:0:-14.6:17.8\n4\t150697691\t261070:1\tA\t]4:150891227]A\t19\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=ATA;MAPQ=60;MATEID=261070:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_4_150871001_150896001_14C;SPAN=193536;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:7:14:15.8:19.1,0,15.8:7:3:-19.19:19.19\n4\t150824964\t261103:1\tC\tC[4:151005890[\t29\tPASS\tEVDNC=ASSMB;HOMSEQ=CACC;MAPQ=60;MATEID=261103:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_150993501_151018501_23C;SPAN=180926;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:10:10:2.7:29.7,2.7,0:10:0:-29.71:29.71\n4\t150889529\t261357:1\tT\tT[4:151614011[\t23\tPASS\tDISC_MAPQ=59;EVDNC=ASDIS;INSERTION=AC;MAPQ=60;MATEID=261357:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_151606001_151631001_71C;SPAN=724482;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:22:23.6:23.6,0,30.2:6:8:-23.53:23.59\n4\t150891227\t261070:2\tA\tA[4:150697691[\t19\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=ATA;MAPQ=60;MATEID=261070:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_4_150871001_150896001_14C;SPAN=193536;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:7:14:15.8:19.1,0,15.8:7:3:-19.19:19.19\n4\t151005890\t261103:2\tC\t]4:150824964]C\t29\tPASS\tEVDNC=ASSMB;HOMSEQ=CACC;MAPQ=60;MATEID=261103:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_150993501_151018501_23C;SPAN=180926;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:10:10:2.7:29.7,2.7,0:10:0:-29.71:29.71\n4\t151419570\t261276:1\tT\tT[4:151420401[\t20\tPASS\tEVDNC=ASSMB;HOMSEQ=GTCTGTTCCTCATTCTT;MAPQ=60;MATEID=261276:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_151410001_151435001_2C;SPAN=831;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:44:20.6:20.6,0,89.9:10:0:-20.64:23.11\n4\t151420401\t261276:2\tG\t]4:151419570]G\t20\tPASS\tEVDNC=ASSMB;HOMSEQ=GTCTGTTCCTCATTCTT;MAPQ=60;MATEID=261276:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_151410001_151435001_2C;SPAN=831;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:44:20.6:20.6,0,89.9:10:0:-20.64:23.11\n4\t151528024\t261359:1\tC\t]4:151617065]C\t47\tPASS\tEVDNC=ASSMB;INSERTION=A;MAPQ=60;MATEID=261359:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_151606001_151631001_58C;SPAN=89041;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:16:21:4.1:47,0,4.1:16:0:-48.75:48.75\n4\t151538082\t261326:2\tT\t[4:132747922[T\t67\tPASS\tDISC_MAPQ=60;EVDNC=TSI_G;HOMSEQ=AG;INSERTION=TGGGAAGCAGGGAATTGCTGCTGGAAAGACAACCAGATCATGTCTGCCATAGTGCTCAAAGAAAAATAATTTTAAAGTTACAGAAA;MAPQ=60;MATEID=261326:1;MATENM=0;NM=0;NUMPARTS=3;SCTG=c_4_151532501_151557501_28C;SPAN=18790160;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:23:30:8:67.4,0,8:16:10:-70.2:70.2\n4\t151614011\t261357:2\tA\t]4:150889529]A\t23\tPASS\tDISC_MAPQ=55;EVDNC=ASDIS;INSERTION=AC;MAPQ=60;MATEID=261357:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_151606001_151631001_71C;SPAN=724482;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:22:23.6:23.6,0,30.2:6:8:-23.53:23.59\n4\t151617065\t261359:2\tG\tG[4:151528024[\t47\tPASS\tEVDNC=ASSMB;INSERTION=A;MAPQ=60;MATEID=261359:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_151606001_151631001_58C;SPAN=89041;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:16:21:4.1:47,0,4.1:16:0:-48.75:48.75\n4\t151810203\t261406:2\tG\t]4:113846014]G\t39\tPASS\tDISC_MAPQ=25;EVDNC=TSI_G;HOMSEQ=GG;INSERTION=GGTTTTCTAGATATACAATCATGTCATCTGCAAACAGGGACAATTTGACTCTTCTTTTCCTAATTGAATACCCTTTATTTCCTTCTCCTGCGTAATTGCCCTGGCCAGAACTTC;MAPQ=60;MATEID=261406:1;MATENM=0;NM=0;NUMPARTS=3;SCTG=c_4_151802001_151827001_73C;SPAN=37964189;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:24:19.7:39.5,0,19.7:11:3:-39.77:39.77\n4\t152998534\t261761:2\tT\t[4:127800198[T\t62\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;INSERTION=TTAATTAA;MAPQ=60;MATEID=261761:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_4_152978001_153003001_10C;SPAN=25198336;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:19:21:5.7:62.7,5.7,0:13:11:-61.54:61.54\n4\t153093581\t262620:1\tG\t[4:155297937[G\t14\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=C;MAPQ=60;MATEID=262620:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_4_155281001_155306001_94C;SPAN=2204356;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:7:33:14:14,0,66.8:3:4:-13.83:15.94\n4\t153172444\t699197:1\tC\t]14:55912669]C\t36\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;MAPQ=60;MATEID=699197:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_55909001_55934001_46C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:23:20:36.5,0,20:11:9:-36.66:36.66\n4\t153212136\t257457:2\tT\t]4:139735224]T\t23\tPASS\tEVDNC=ASSMB;HOMSEQ=T;MAPQ=60;MATEID=257457:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_139723501_139748501_83C;SPAN=13476912;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:7:8:2.1:23.1,2.1,0:7:0:-22.34:22.34\n4\t153256883\t698839:1\tG\tG[14:54749560[\t22\tPASS\tEVDNC=ASSMB;INSERTION=CAAAACGCTAACAAAATAAATAG;MAPQ=60;MATEID=698839:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_54733001_54758001_25C;SPAN=-1;SUBN=4;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:25:22.7:22.7,0,39.2:9:0:-22.68:22.95\n4\t153664092\t262006:2\tG\t]4:141316353]G\t23\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=262006:1;MATENM=2;NM=1;NUMPARTS=2;SCTG=c_4_153664001_153689001_70C;SPAN=12347739;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:34:23.6:23.6,0,59.9:10:0:-23.45:24.42\n4\t154157039\t262258:1\tC\tC[4:154212720[\t62\tPASS\tDISC_MAPQ=23;EVDNC=DSCRD;IMPRECISE;MAPQ=23;MATEID=262258:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=4:154157039(+)-4:154212720(-)__4_154203001_154228001D;SPAN=55681;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:22:37:29.3:62.3,0,29.3:0:22:-62.79:62.79\n4\t154157044\t988278:1\tA\t[Un_KN707710v1_decoy:1[A\t99\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=988278:2;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_561_1_5701_3C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:34:11:9.3:102.3,9.3,0:34:0:-102.3:102.3\n4\t154212720\t262258:2\tA\t]4:154157039]A\t62\tPASS\tDISC_MAPQ=32;EVDNC=DSCRD;IMPRECISE;MAPQ=32;MATEID=262258:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=4:154157039(+)-4:154212720(-)__4_154203001_154228001D;SPAN=55681;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:22:37:29.3:62.3,0,29.3:0:22:-62.79:62.79\n4\t155292496\t262618:2\tA\t]4:122721082]A\t34\tPASS\tEVDNC=ASSMB;HOMSEQ=A;MAPQ=60;MATEID=262618:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_155281001_155306001_83C;SPAN=32571414;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:29:34.7:34.7,0,38:13:0:-34.76:34.77\n4\t155293071\t462485:1\tG\tG[8:91551154[\t24\tPASS\tEVDNC=ASSMB;HOMSEQ=G;MAPQ=60;MATEID=462485:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_91532001_91557001_5C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:20:24.2:24.2,0,24.2:9:0:-24.09:24.09\n4\t155297937\t262620:2\tC\t[4:153093581[C\t14\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=C;MAPQ=60;MATEID=262620:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_4_155281001_155306001_94C;SPAN=2204356;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:7:33:14:14,0,66.8:3:4:-13.83:15.94\n4\t155418929\t262665:2\tC\t[4:137443236[C\t17\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;MAPQ=60;MATEID=262665:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_155403501_155428501_47C;SPAN=17975693;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:7:19:17.9:17.9,0,27.8:6:2:-17.77:17.94\n4\t155419067\t485690:1\tC\tC[9:10841158[\t20\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=485690:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_10829001_10854001_13C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:23:20:20,0,36.5:8:0:-19.94:20.25\n4\t155578868\t262731:1\tG\tG]4:155582329]\t43\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=262731:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=4:155578868(+)-4:155582329(+)__4_155575001_155600001D;SPAN=3461;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:15:22:10.4:43.4,0,10.4:0:15:-44.31:44.31\n4\t155582329\t262731:2\tC\tC]4:155578868]\t43\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=262731:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=4:155578868(+)-4:155582329(+)__4_155575001_155600001D;SPAN=3461;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:15:22:10.4:43.4,0,10.4:0:15:-44.31:44.31\n4\t159532150\t263732:1\tT\tT[4:159613476[\t36\tPASS\tDISC_MAPQ=34;EVDNC=DSCRD;IMPRECISE;MAPQ=34;MATEID=263732:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=4:159532150(+)-4:159613476(-)__4_159593001_159618001D;SPAN=81326;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:12:3:3.3:36.3,3.3,0:0:12:-36.31:36.31\n4\t159613476\t263732:2\tT\t]4:159532150]T\t36\tPASS\tDISC_MAPQ=44;EVDNC=DSCRD;IMPRECISE;MAPQ=44;MATEID=263732:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=4:159532150(+)-4:159613476(-)__4_159593001_159618001D;SPAN=81326;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:12:3:3.3:36.3,3.3,0:0:12:-36.31:36.31\n4\t160672642\t263986:1\tG\t]4:160672823]G\t26\tPASS\tEVDNC=ASSMB;HOMSEQ=G;MAPQ=60;MATEID=263986:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_160671001_160696001_4C;SPAN=181;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:37:26:26,0,65.6:11:0:-25.91:26.93\n4\t160672823\t263986:2\tG\tG[4:160672642[\t26\tPASS\tEVDNC=ASSMB;HOMSEQ=G;MAPQ=60;MATEID=263986:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_160671001_160696001_4C;SPAN=181;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:37:26:26,0,65.6:11:0:-25.91:26.93\n4\t162472965\t264455:1\tG\tG[4:162475268[\t52\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=264455:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=4:162472965(+)-4:162475268(-)__4_162459501_162484501D;SPAN=2303;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:18:5:4.8:52.8,4.8,0:0:18:-52.81:52.81\n4\t162475268\t264455:2\tT\t]4:162472965]T\t52\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=264455:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=4:162472965(+)-4:162475268(-)__4_162459501_162484501D;SPAN=2303;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:18:5:4.8:52.8,4.8,0:0:18:-52.81:52.81\n4\t162657493\t264507:1\tT\t[4:162657724[T\t29\tPASS\tDISC_MAPQ=59;EVDNC=ASDIS;INSERTION=TA;MAPQ=60;MATEID=264507:2;MATENM=0;NM=3;NUMPARTS=2;SCTG=c_4_162655501_162680501_9C;SPAN=231;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:10:10:2.7:29.7,2.7,0:7:8:-29.71:29.71\n4\t162657724\t264507:2\tT\t[4:162657493[T\t29\tPASS\tDISC_MAPQ=57;EVDNC=ASDIS;INSERTION=TA;MAPQ=60;MATEID=264507:1;MATENM=3;NM=0;NUMPARTS=2;SCTG=c_4_162655501_162680501_9C;SPAN=231;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:10:10:2.7:29.7,2.7,0:7:8:-29.71:29.71\n4\t164281891\t264869:1\tT\tT[4:164285064[\t42\tPASS\tEVDNC=ASSMB;HOMSEQ=AAAT;MAPQ=60;MATEID=264869:2;MATENM=1;NM=4;NUMPARTS=2;SCTG=c_4_164272501_164297501_12C;SPAN=3173;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:14:8:3.9:42.9,3.9,0:14:0:-42.91:42.91\n4\t164285064\t264869:2\tA\t]4:164281891]A\t42\tPASS\tEVDNC=ASSMB;HOMSEQ=AAAT;MAPQ=60;MATEID=264869:1;MATENM=4;NM=1;NUMPARTS=2;SCTG=c_4_164272501_164297501_12C;SPAN=3173;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:14:8:3.9:42.9,3.9,0:14:0:-42.91:42.91\n4\t165081466\t265105:1\tC\tC[4:165083879[\t36\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=265105:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=4:165081466(+)-4:165083879(-)__4_165081001_165106001D;SPAN=2413;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:12:5:3.3:36.3,3.3,0:0:12:-36.31:36.31\n4\t165083879\t265105:2\tT\t]4:165081466]T\t36\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=265105:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=4:1650814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:62.47\n4\t178333677\t268281:2\tG\tG[4:178332605[\t85\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;INSERTION=CAG;MAPQ=60;MATEID=268281:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_178311001_178336001_12C;SPAN=1072;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:28:27:7.8:85.8,7.8,0:23:17:-85.82:85.82\n4\t178333677\t268282:2\tG\t]4:178332737]G\t60\tPASS\tEVDNC=ASSMB;INSERTION=AAT;MAPQ=60;MATEID=268282:1;MATENM=0;NM=5;NUMPARTS=2;SCTG=c_4_178311001_178336001_13C;SPAN=940;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:21:30:14.6:60.8,0,14.6:21:0:-62.47:62.47\n4\t179498878\t268551:1\tC\t]4:179517058]C\t15\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;INSERTION=TCCTTTACTACTAACTTTAGGACAATAAGTCCTTTA;MAPQ=60;MATEID=268551:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_4_179511501_179536501_17C;SPAN=18180;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:6:15:15.5:15.5,0,22.1:4:4:-15.59:15.65\n4\t179517058\t268551:2\tG\tG[4:179498878[\t15\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;INSERTION=TCCTTTACTACTAACTTTAGGACAATAAGTCCTTTA;MAPQ=60;MATEID=268551:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_4_179511501_179536501_17C;SPAN=18180;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:6:15:15.5:15.5,0,22.1:4:4:-15.59:15.65\n4\t179791878\t268623:1\tA\tA[4:179792358[\t39\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=GTA;MAPQ=60;MATEID=268623:2;MATENM=2;NM=1;NUMPARTS=2;SCTG=c_4_179781001_179806001_1C;SPAN=480;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:13:15:0.9:39.6,0.9,0:8:7:-41.34:41.34\n4\t179792358\t268623:2\tG\t]4:179791878]G\t39\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=GTA;MAPQ=60;MATEID=268623:1;MATENM=1;NM=2;NUMPARTS=2;SCTG=c_4_179781001_179806001_1C;SPAN=480;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:13:15:0.9:39.6,0.9,0:8:7:-41.34:41.34\n4\t179989520\t268718:1\tA\tA[4:180052226[\t26\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=268718:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=4:179989520(+)-4:180052226(-)__4_180050501_180075501D;SPAN=62706;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:9:9:2.4:26.4,2.4,0:0:9:-26.41:26.41\n4\t180052226\t268718:2\tC\t]4:179989520]C\t26\tPASS\tDISC_MAPQ=53;EVDNC=DSCRD;IMPRECISE;MAPQ=53;MATEID=268718:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=4:179989520(+)-4:180052226(-)__4_180050501_180075501D;SPAN=62706;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:9:9:2.4:26.4,2.4,0:0:9:-26.41:26.41\n4\t180759783\t268996:1\tG\tG[4:180863357[\t26\tPASS\tEVDNC=ASSMB;INSERTION=AG;MAPQ=60;MATEID=268996:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_180859001_180884001_26C;SPAN=103574;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:9:2:2.4:26.4,2.4,0:9:0:-26.41:26.41\n4\t180855405\t269019:1\tA\tA[4:181404211[\t36\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=CTGGTAA;MAPQ=60;MATEID=269019:2;MATENM=0;NM=4;NUMPARTS=2;SCTG=c_4_181398001_181423001_0C;SPAN=548806;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:12:2:3.3:36.3,3.3,0:10:6:-36.31:36.31\n4\t180863357\t268996:2\tA\t]4:180759783]A\t26\tPASS\tEVDNC=ASSMB;INSERTION=AG;MAPQ=60;MATEID=268996:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_180859001_180884001_26C;SPAN=103574;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:9:2:2.4:26.4,2.4,0:9:0:-26.41:26.41\n4\t180878348\t269006:1\tT\tT[4:180927019[\t56\tPASS\tEVDNC=ASSMB;HOMSEQ=T;MAPQ=60;MATEID=269006:2;MATENM=1;NM=2;NUMPARTS=2;SCTG=c_4_180908001_180933001_1C;SPAN=48671;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:19:4:5.1:56.1,5.1,0:19:0:-56.11:56.11\n4\t180927019\t269006:2\tT\t]4:180878348]T\t56\tPASS\tEVDNC=ASSMB;HOMSEQ=T;MAPQ=60;MATEID=269006:1;MATENM=2;NM=1;NUMPARTS=2;SCTG=c_4_180908001_180933001_1C;SPAN=48671;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:19:4:5.1:56.1,5.1,0:19:0:-56.11:56.11\n4\t180955649\t269010:1\tT\tT[4:180957136[\t19\tPASS\tEVDNC=ASSMB;HOMSEQ=CTCTACAGCACTTTCT;MAPQ=60;MATEID=269010:2;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_4_180957001_180982001_9C;SPAN=1487;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:7:2:1.8:19.8,1.8,0:7:0:-19.8:19.8\n4\t180957136\t269010:2\tC\t]4:180955649]C\t19\tPASS\tEVDNC=ASSMB;HOMSEQ=CTCTACAGCACTTTCT;MAPQ=60;MATEID=269010:1;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_4_180957001_180982001_9C;SPAN=1487;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:7:2:1.8:19.8,1.8,0:7:0:-19.8:19.8\n4\t180961713\t269081:1\tG\tG[4:181779193[\t33\tPASS\tEVDNC=ASSMB;HOMSEQ=TAG;MAPQ=60;MATEID=269081:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_181765501_181790501_21C;SPAN=817480;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:11:9:3:33,3,0:11:0:-33.01:33.01\n4\t181404211\t269019:2\tC\t]4:180855405]C\t36\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=CTGGTAA;MAPQ=60;MATEID=269019:1;MATENM=4;NM=0;NUMPARTS=2;SCTG=c_4_181398001_181423001_0C;SPAN=548806;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:12:2:3.3:36.3,3.3,0:10:6:-36.31:36.31\n4\t181779193\t269081:2\tT\t]4:180961713]T\t33\tPASS\tEVDNC=ASSMB;HOMSEQ=TAG;MAPQ=60;MATEID=269081:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_181765501_181790501_21C;SPAN=817480;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:11:9:3:33,3,0:11:0:-33.01:33.01\n4\t181891336\t269122:1\tT\tT[4:181952530[\t19\tPASS\tEVDNC=ASSMB;HOMSEQ=T;MAPQ=60;MATEID=269122:2;MATENM=9;NM=0;NUMPARTS=2;SCTG=c_4_181937001_181962001_3C;SPAN=61194;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:7:1:1.8:19.8,1.8,0:7:0:-19.8:19.8\n4\t181952530\t269122:2\tT\t]4:181891336]T\t19\tPASS\tEVDNC=ASSMB;HOMSEQ=T;MAPQ=60;MATEID=269122:1;MATENM=0;NM=9;NUMPARTS=2;SCTG=c_4_181937001_181962001_3C;SPAN=61194;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:7:1:1.8:19.8,1.8,0:7:0:-19.8:19.8\n4\t182335217\t477262:1\tG\t[8:130535526[G\t99\tPASS\tDISC_MAPQ=42;EVDNC=ASDIS;MAPQ=60;MATEID=477262:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_130511501_130536501_1C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:38:25:10.5:115.5,10.5,0:27:19:-115.5:115.5\n4\t183247605\t330678:1\tC\t]6:21456465]C\t23\tPASS\tDISC_MAPQ=255;EVDNC=ASDIS;HOMSEQ=CTATATATACTATATATA;MAPQ=60;MATEID=330678:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_21437501_21462501_22C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:11:3.5:23.3,0,3.5:7:3:-24.05:24.05\n4\t183382550\t269465:1\tT\tT[4:183382860[\t46\tPASS\tEVDNC=ASSMB;HOMSEQ=ATAGCACTTTCTTT;MAPQ=60;MATEID=269465:2;MATENM=1;NM=2;NUMPARTS=2;SCTG=c_4_183382501_183407501_9C;SPAN=310;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:16:7:4.2:46.2,4.2,0:16:0:-46.21:46.21\n4\t183382860\t269465:2\tA\t]4:183382550]A\t46\tPASS\tEVDNC=ASSMB;HOMSEQ=ATAGCACTTTCTTT;MAPQ=60;MATEID=269465:1;MATENM=2;NM=1;NUMPARTS=2;SCTG=c_4_183382501_183407501_9C;SPAN=310;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:16:7:4.2:46.2,4.2,0:16:0:-46.21:46.21\n4\t184579575\t269806:1\tC\t]4:184601585]C\t23\tPASS\tEVDNC=ASSMB;INSERTION=T;MAPQ=60;MATEID=269806:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_4_184583001_184608001_4C;SPAN=22010;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:10:0.5:23.6,0,0.5:8:0:-24.74:24.74\n4\t184601585\t269806:2\tG\tG[4:184579575[\t23\tPASS\tEVDNC=ASSMB;INSERTION=T;MAPQ=60;MATEID=269806:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_4_184583001_184608001_4C;SPAN=22010;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:10:0.5:23.6,0,0.5:8:0:-24.74:24.74\n4\t185129516\t269933:1\tA\tA[4:185129779[\t8\tPASS\tEVDNC=ASSMB;HOMSEQ=TGGAGTGCAGTGGCGCGATCTCGGCTCACTGCAA;MAPQ=60;MATEID=269933:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_185122001_185147001_10C;SPAN=263;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:4:18:8.3:8.3,0,34.7:4:0:-8.144:9.2\n4\t185129779\t269933:2\tT\t]4:185129516]T\t8\tPASS\tEVDNC=ASSMB;HOMSEQ=TGGAGTGCAGTGGCGCGATCTCGGCTCACTGCAA;MAPQ=60;MATEID=269933:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_185122001_185147001_10C;SPAN=263;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:4:18:8.3:8.3,0,34.7:4:0:-8.144:9.2\n4\t185520603\t270120:1\tT\tT[4:185522919[\t69\tPASS\tDISC_MAPQ=59;EVDNC=DSCRD;IMPRECISE;MAPQ=59;MATEID=270120:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=4:185520603(+)-4:185522919(-)__4_185514001_185539001D;SPAN=2316;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:23:5:6.3:69.3,6.3,0:0:23:-69.32:69.32\n4\t185522919\t270120:2\tG\t]4:185520603]G\t69\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=270120:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=4:185520603(+)-4:185522919(-)__4_185514001_185539001D;SPAN=2316;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:23:5:6.3:69.3,6.3,0:0:23:-69.32:69.32\n4\t188222216\t270910:1\tG\t]4:188276133]G\t36\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=G;MAPQ=60;MATEID=270910:2;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_4_188258001_188283001_23C;SPAN=53917;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:12:11:3.3:36.3,3.3,0:7:8:-36.31:36.31\n4\t188276133\t270910:2\tG\tG[4:188222216[\t36\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=G;MAPQ=60;MATEID=270910:1;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_4_188258001_188283001_23C;SPAN=53917;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:12:11:3.3:36.3,3.3,0:7:8:-36.31:36.31\n4\t188373022\t270971:1\tG\t]4:188373147]G\t64\tPASS\tEVDNC=ASSMB;HOMSEQ=GA;MAPQ=60;MATEID=270971:2;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_4_188356001_188381001_5C;SPAN=125;SUBN=4;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:22:28:5.3:64.7,0,5.3:22:0:-67.65:67.65\n4\t188373147\t270971:2\tA\tA[4:188373022[\t64\tPASS\tEVDNC=ASSMB;HOMSEQ=GA;MAPQ=60;MATEID=270971:1;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_4_188356001_188381001_5C;SPAN=125;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:22:28:5.3:64.7,0,5.3:22:0:-67.65:67.65\n4\t188802177\t271163:2\tG\t]4:116186292]G\t19\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=271163:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_4_188797001_188822001_5C;SPAN=72615885;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:7:3:1.8:19.8,1.8,0:7:0:-19.8:19.8\n4\t189136860\t271284:1\tT\tT[4:189143119[\t46\tPASS\tEVDNC=ASSMB;HOMSEQ=ATAAATTACCCAGTCT;MAPQ=60;MATEID=271284:2;MATENM=5;NM=3;NUMPARTS=2;SCTG=c_4_189140001_189165001_16C;SPAN=6259;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:15:5:4.2:46.2,4.2,0:15:0:-46.21:46.21\n4\t189143119\t271284:2\tA\t]4:189136860]A\t46\tPASS\tEVDNC=ASSMB;HOMSEQ=ATAAATTACCCAGTCT;MAPQ=60;MATEID=271284:1;MATENM=3;NM=5;NUMPARTS=2;SCTG=c_4_189140001_189165001_16C;SPAN=6259;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:15:5:4.2:46.2,4.2,0:15:0:-46.21:46.21\n4\t189449410\t271447:1\tG\tG[4:189450079[\t36\tPASS\tEVDNC=ASSMB;HOMSEQ=G;MAPQ=60;MATEID=271447:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_4_189434001_189459001_5C;SPAN=669;SUBN=2;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:12:14:0.6:36.3,0.6,0:12:0:-38:38\n4\t189450079\t271447:2\tG\t]4:189449410]G\t36\tPASS\tEVDNC=ASSMB;HOMSEQ=G;MAPQ=60;MATEID=271447:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_4_189434001_189459001_5C;SPAN=669;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:12:14:0.6:36.3,0.6,0:12:0:-38:38\n4\t189508176\t271479:1\tT\t]4:189508329]T\t61\tPASS\tEVDNC=ASSMB;HOMSEQ=T;MAPQ=60;MATEID=271479:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_189507501_189532501_6C;SPAN=153;SUBN=2;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:21:27:5.6:61.7,0,5.6:21:0:-64.38:64.38\n4\t189508329\t271479:2\tT\tT[4:189508176[\t61\tPASS\tEVDNC=ASSMB;HOMSEQ=T;MAPQ=60;MATEID=271479:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_189507501_189532501_6C;SPAN=153;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:21:27:5.6:61.7,0,5.6:21:0:-64.38:64.38\n4\t189948866\t870919:1\tT\tT[20:29088471[\t3\tPASS\tDISC_MAPQ=19;EVDNC=DSCRD;IMPRECISE;MAPQ=19;MATEID=870919:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=4:189948866(+)-20:29088471(-)__20_29081501_29106501D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:81:3.8:3.8,0,198.5:0:8:-3.64:15.33\n5\t15864\t322397:1\tC\t]6:150718]C\t99\tPASS\tDISC_MAPQ=17;EVDNC=TSI_L;HOMSEQ=CTT;MAPQ=52;MATEID=322397:2;MATENM=6;NM=5;NUMPARTS=3;REPSEQ=TTT;SCTG=c_6_147001_172001_17C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:39:30:10.8:118.8,10.8,0:32:13:-118.8:118.8\n5\t231835\t272233:1\tC\tC[5:232743[\t72\tPASS\tDISC_MAPQ=35;EVDNC=DSCRD;IMPRECISE;MAPQ=35;MATEID=272233:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:231835(+)-5:232743(-)__5_220501_245501D;SPAN=908;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:24:18:6.6:72.6,6.6,0:0:24:-72.62:72.62\n5\t232743\t272233:2\tA\t]5:231835]A\t72\tPASS\tDISC_MAPQ=37;EVDNC=DSCRD;IMPRECISE;MAPQ=37;MATEID=272233:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:231835(+)-5:232743(-)__5_220501_245501D;SPAN=908;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:24:18:6.6:72.6,6.6,0:0:24:-72.62:72.62\n5\t281934\t272313:1\tC\tC]Un_KN707921v1_decoy:2561]\t25\tPASS\tDISC_MAPQ=255;EVDNC=TSI_L;INSERTION=C;MAPQ=60;MATEID=272313:2;MATENM=0;NM=0;NUMPARTS=5;SCTG=c_5_269501_294501_90C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:28:25.1:25.1,0,44.9:10:0:-25.14:25.46\n5\t693023\t272546:1\tC\tC[5:784461[\t40\tPASS\tDISC_MAPQ=48;EVDNC=DSCRD;IMPRECISE;MAPQ=48;MATEID=272546:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:693023(+)-5:784461(-)__5_759501_784501D;SPAN=91438;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:21:10.7:40.4,0,10.7:0:14:-41.11:41.11\n5\t697422\t272493:1\tG\t]5:788754]G\t18\tPASS\tDISC_MAPQ=55;EVDNC=DSCRD;IMPRECISE;MAPQ=55;MATEID=272493:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:697422(-)-5:788754(+)__5_686001_711001D;SPAN=91332;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:28:18.5:18.5,0,51.5:0:8:-18.54:19.42\n5\t710054\t272506:1\tT\t]5:795262]T\t18\tPASS\tDISC_MAPQ=55;EVDNC=DSCRD;IMPRECISE;MAPQ=55;MATEID=272506:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:710054(-)-5:795262(+)__5_686001_711001D;SPAN=85208;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:29:18.2:18.2,0,54.5:0:8:-18.26:19.27\n5\t711897\t272511:1\tC\tC[5:796051[\t59\tPASS\tDISC_MAPQ=59;EVDNC=ASDIS;HOMSEQ=TTCCCAGTACTGTGCTC;MAPQ=60;MATEID=272511:2;MATENM=0;NM=3;NUMPARTS=2;SCTG=c_5_710501_735501_41C;SPAN=84154;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:20:20:5.4:59.4,5.4,0:13:8:-59.41:59.41\n5\t754009\t272532:1\tT\t]5:754663]T\t37\tPASS\tDISC_MAPQ=38;EVDNC=DSCRD;IMPRECISE;MAPQ=38;MATEID=272532:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:754009(-)-5:754663(+)__5_735001_760001D;SPAN=654;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:17:68:37.1:37.1,0,132.8:0:17:-37:40.1\n5\t754663\t272532:2\tG\tG[5:754009[\t37\tPASS\tDISC_MAPQ=40;EVDNC=DSCRD;IMPRECISE;MAPQ=40;MATEID=272532:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:754009(-)-5:754663(+)__5_735001_760001D;SPAN=654;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:17:68:37.1:37.1,0,132.8:0:17:-37:40.1\n5\t784461\t272546:2\tC\t]5:693023]C\t40\tPASS\tDISC_MAPQ=41;EVDNC=DSCRD;IMPRECISE;MAPQ=41;MATEID=272546:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:693023(+)-5:784461(-)__5_759501_784501D;SPAN=91438;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:21:10.7:40.4,0,10.7:0:14:-41.11:41.11\n5\t788754\t272493:2\tG\tG[5:697422[\t18\tPASS\tDISC_MAPQ=37;EVDNC=DSCRD;IMPRECISE;MAPQ=37;MATEID=272493:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:697422(-)-5:788754(+)__5_686001_711001D;SPAN=91332;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:28:18.5:18.5,0,51.5:0:8:-18.54:19.42\n5\t795262\t272506:2\tT\tT[5:710054[\t18\tPASS\tDISC_MAPQ=53;EVDNC=DSCRD;IMPRECISE;MAPQ=53;MATEID=272506:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:710054(-)-5:795262(+)__5_686001_711001D;SPAN=85208;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:29:18.2:18.2,0,54.5:0:8:-18.26:19.27\n5\t796051\t272511:2\tT\t]5:711897]T\t59\tPASS\tDISC_MAPQ=255;EVDNC=ASDIS;HOMSEQ=TTCCCAGTACTGTGCTC;MAPQ=31;MATEID=272511:1;MATENM=3;NM=0;NUMPARTS=2;SCTG=c_5_710501_735501_41C;SPAN=84154;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:20:20:5.4:59.4,5.4,0:13:8:-59.41:59.41\n5\t1044616\t272655:1\tT\t]5:1045417]T\t94\tPASS\tDISC_MAPQ=42;EVDNC=DSCRD;IMPRECISE;MAPQ=42;MATEID=272655:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:1044616(-)-5:1045417(+)__5_1029001_1054001D;SPAN=801;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:32:39:2.3:94.7,0,2.3:0:32:-99.78:99.78\n5\t1045417\t272655:2\tT\tT[5:1044616[\t94\tPASS\tDISC_MAPQ=53;EVDNC=DSCRD;IMPRECISE;MAPQ=53;MATEID=272655:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:1044616(-)-5:1045417(+)__5_1029001_1054001D;SPAN=801;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:32:39:2.3:94.7,0,2.3:0:32:-99.78:99.78\n5\t1178274\t272733:1\tC\tC[5:1180617[\t99\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=272733:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:1178274(+)-5:1180617(-)__5_1176001_1201001D;SPAN=2343;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:35:7:9.6:105.6,9.6,0:0:35:-105.6:105.6\n5\t1180617\t272733:2\tA\t]5:1178274]A\t99\tPASS\tDISC_MAPQ=47;EVDNC=DSCRD;IMPRECISE;MAPQ=47;MATEID=272733:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:1178274(+)-5:1180617(-)__5_1176001_1201001D;SPAN=2343;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:35:7:9.6:105.6,9.6,0:0:35:-105.6:105.6\n5\t1364018\t694524:1\tC\t[14:42561542[C\t39\tPASS\tDISC_MAPQ=52;EVDNC=ASDIS;HOMSEQ=TTG;MAPQ=60;MATEID=694524:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_42556501_42581501_72C;SPAN=-1;SUBN=1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:25:22.7:39.2,0,22.7:5:11:-39.39:39.39\n5\t1845407\t273027:1\tC\t]5:1846001]C\t99\tPASS\tDISC_MAPQ=43;EVDNC=ASDIS;HOMSEQ=CTCTCTCTATCTCTATATGTGTCTCCATCTCTGTCTCTATCTCTAT;MAPQ=19;MATEID=273027:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_5_1837501_1862501_44C;SPAN=594;SUBN=1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:45:49:13.5:148.5,13.5,0:28:25:-146.9:146.9\n5\t1846001\t273027:2\tT\tT[5:1845407[\t99\tPASS\tDISC_MAPQ=57;EVDNC=ASDIS;HOMSEQ=CTCTCTCTATCTCTATATGTGTCTCCATCTCTGTCTCTATCTCTAT;MAPQ=60;MATEID=273027:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_5_1837501_1862501_44C;SPAN=594;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:45:49:13.5:148.5,13.5,0:28:25:-146.9:146.9\n5\t1941042\t273098:1\tT\tT[5:1941341[\t82\tPASS\tEVDNC=ASSMB;HOMSEQ=GGAAAAATTTCT;MAPQ=60;MATEID=273098:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_5_1935501_1960501_21C;SPAN=299;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:27:22:7.5:82.5,7.5,0:27:0:-82.52:82.52\n5\t1941341\t273098:2\tG\t]5:1941042]G\t82\tPASS\tEVDNC=ASSMB;HOMSEQ=GGAAAAATTTCT;MAPQ=60;MATEID=273098:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_5_1935501_1960501_21C;SPAN=299;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:27:22:7.5:82.5,7.5,0:27:0:-82.52:82.52\n5\t1950911\t273108:1\tG\tG[5:1951342[\t79\tPASS\tEVDNC=ASSMB;HOMSEQ=GTCGTCTGCTGTG;MAPQ=60;MATEID=273108:2;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_5_1935501_1960501_49C;SPAN=431;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:26:30:1.8:79.2,1.8,0:26:0:-82.68:82.68\n5\t1951342\t273108:2\tG\t]5:1950911]G\t79\tPASS\tEVDNC=ASSMB;HOMSEQ=GTCGTCTGCTGTG;MAPQ=60;MATEID=273108:1;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_5_1935501_1960501_49C;SPAN=431;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:26:30:1.8:79.2,1.8,0:26:0:-82.68:82.68\n5\t1968299\t273121:1\tG\tG[5:1971470[\t35\tPASS\tEVDNC=ASSMB;HOMSEQ=AAATAAAGAAAATTGTGG;MAPQ=60;MATEID=273121:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_5_1960001_1985001_15C;SPAN=3171;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:27:190:35.8:35.8,0,441.8:27:0:-35.72:56.29\n5\t1971470\t273121:2\tA\t]5:1968299]A\t35\tPASS\tEVDNC=ASSMB;HOMSEQ=AAATAAAGAAAATTGTGG;MAPQ=60;MATEID=273121:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_5_1960001_1985001_15C;SPAN=3171;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:27:190:35.8:35.8,0,441.8:27:0:-35.72:56.29\n5\t2145979\t273172:1\tA\tA[5:2146365[\t21\tPASS\tDISC_MAPQ=6;EVDNC=ASDIS;INSERTION=AGTCCAGAGCCTCCACCTCCTG;MAPQ=26;MATEID=273172:2;MATENM=6;NM=2;NUMPARTS=2;SCTG=c_5_2131501_2156501_26C;SPAN=386;SUBN=1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:78:21.2:21.2,0,173:8:5:-20.99:28.09\n5\t2146365\t273172:2\tA\t]5:2145979]A\t21\tPASS\tDISC_MAPQ=2;EVDNC=ASDIS;INSERTION=AGTCCAGAGCCTCCACCTCCTG;MAPQ=10;MATEID=273172:1;MATENM=2;NM=6;NUMPARTS=2;SCTG=c_5_2131501_2156501_26C;SPAN=386;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:78:21.2:21.2,0,173:8:5:-20.99:28.09\n5\t3499159\t273747:1\tT\tT[5:3499469[\t18\tPASS\tEVDNC=ASSMB;HOMSEQ=AAAAGCAGACAT;MAPQ=60;MATEID=273747:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_5_3479001_3504001_126C;SPAN=310;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:27:18.8:18.8,0,48.5:8:0:-18.82:19.57\n5\t3499469\t273747:2\tA\t]5:3499159]A\t18\tPASS\tEVDNC=ASSMB;HOMSEQ=AAAAGCAGACAT;MAPQ=60;MATEID=273747:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_5_3479001_3504001_126C;SPAN=310;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:27:18.8:18.8,0,48.5:8:0:-18.82:19.57\n5\t3502213\t273749:1\tT\tT[5:3502528[\t0\tPASS\tEVDNC=ASSMB;HOMSEQ=CAAAATTTATTTTT;MAPQ=60;MATEID=273749:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_5_3479001_3504001_162C;SPAN=315;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/0:6:123:14.4:0,14.4,336.6:6:0:14.77:9.6\n5\t3502528\t273749:2\tC\t]5:3502213]C\t0\tPASS\tEVDNC=ASSMB;HOMSEQ=CAAAATTTATTTTT;MAPQ=60;MATEID=273749:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_5_3479001_3504001_162C;SPAN=315;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/0:6:123:14.4:0,14.4,336.6:6:0:14.77:9.6\n5\t5930999\t274695:1\tA\t]5:5931169]A\t19\tPASS\tEVDNC=ASSMB;HOMSEQ=ATAATGCATGCCTGAATGTGTGCA;MAPQ=60;MATEID=274695:2;MATENM=3;NM=0;NUMPARTS=2;SCTG=c_5_5929001_5954001_66C;SPAN=170;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:48:19.7:19.7,0,98.9:10:0:-19.52:22.68\n5\t5931169\t274695:2\tA\tA[5:5930999[\t19\tPASS\tEVDNC=ASSMB;HOMSEQ=ATAATGCATGCCTGAATGTGTGCA;MAPQ=60;MATEID=274695:1;MATENM=0;NM=3;NUMPARTS=2;SCTG=c_5_5929001_5954001_66C;SPAN=170;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:48:19.7:19.7,0,98.9:10:0:-19.52:22.68\n5\t6481317\t274867:1\tC\t]5:6505336]C\t35\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;INSERTION=AACAGA;MAPQ=60;MATEID=274867:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_5_6492501_6517501_47C;SPAN=24019;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:17:5.3:35,0,5.3:5:11:-35.78:35.78\n5\t6505336\t274867:2\tC\tC[5:6481317[\t35\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;INSERTION=AACAGA;MAPQ=60;MATEID=274867:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_5_6492501_6517501_47C;SPAN=24019;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:17:5.3:35,0,5.3:5:11:-35.78:35.78\n5\t7372255\t275284:1\tC\t]5:7372743]C\t32\tPASS\tDISC_MAPQ=52;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=275284:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_5_7350001_7375001_31C;SPAN=488;SUBN=4;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:25:29.3:32.6,0,29.3:5:9:-32.59:32.59\n5\t7372743\t275284:2\tA\tA[5:7372255[\t32\tPASS\tDISC_MAPQ=48;EVDNC=DSCRD;IMPRECISE;MAPQ=5;MATEID=275284:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_5_7350001_7375001_31C;SPAN=488;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:25:29.3:32.6,0,29.3:5:9:-32.59:32.59\n5\t8557583\t275732:1\tT\t]5:8573594]T\t12\tPASS\tEVDNC=ASSMB;INSERTION=AACTAAGGATAGTCTTTTT;MAPQ=60;MATEID=275732:2;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_5_8550501_8575501_60C;SPAN=16011;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:7:38:12.5:12.5,0,81.8:7:0:-12.43:15.46\n5\t8573594\t275732:2\tG\tG[5:8557583[\t12\tPASS\tEVDNC=ASSMB;INSERTION=AACTAAGGATAGTCTTTTT;MAPQ=60;MATEID=275732:1;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_5_8550501_8575501_60C;SPAN=16011;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:7:38:12.5:12.5,0,81.8:7:0:-12.43:15.46\n5\t8897316\t284229:1\tC\t]5:28844816]C\t50\tPASS\tEVDNC=ASSMB;INSERTION=A;MAPQ=60;MATEID=284229:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_5_28836501_28861501_24C;SPAN=19947500;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:18:30:24.5:50.9,0,24.5:18:0:-51.49:51.49\n5\t9400507\t276045:1\tT\tT[5:9400769[\t29\tPASS\tEVDNC=ASSMB;HOMSEQ=ACATTTTTT;MAPQ=60;MATEID=276045:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_5_9383501_9408501_9C;SPAN=262;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:38:29:29,0,65.3:12:0:-28.93:29.75\n5\t9400769\t276045:2\tA\t]5:9400507]A\t29\tPASS\tEVDNC=ASSMB;HOMSEQ=ACATTTTTT;MAPQ=60;MATEID=276045:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_5_9383501_9408501_9C;SPAN=262;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:38:29:29,0,65.3:12:0:-28.93:29.75\n5\t10005166\t276277:1\tT\tT[5:10005471[\t99\tPASS\tDISC_MAPQ=53;EVDNC=ASDIS;INSERTION=CAC;MAPQ=60;MATEID=276277:2;MATENM=3;NM=1;NUMPARTS=2;SCTG=c_5_9996001_10021001_17C;SPAN=305;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:70:19:19.5:214.5,19.5,0:58:17:-214.6:214.6\n5\t10005471\t276277:2\tA\t]5:10005166]A\t99\tPASS\tDISC_MAPQ=28;EVDNC=ASDIS;INSERTION=CAC;MAPQ=60;MATEID=276277:1;MATENM=1;NM=3;NUMPARTS=2;SCTG=c_5_9996001_10021001_17C;SPAN=305;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:70:19:19.5:214.5,19.5,0:58:17:-214.6:214.6\n5\t10336485\t276443:1\tG\tG[5:10336766[\t2\tPASS\tEVDNC=ASSMB;HOMSEQ=CTGCACTCCAGCCTGGG;MAPQ=60;MATEID=276443:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_5_10314501_10339501_45C;SPAN=281;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:5:50:2.6:2.6,0,121.4:5:0:-2.45:9.611\n5\t10336766\t276443:2\tC\t]5:10336485]C\t2\tPASS\tEVDNC=ASSMB;HOMSEQ=CTGCACTCCAGCCTGGG;MAPQ=60;MATEID=276443:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_5_10314501_10339501_45C;SPAN=281;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:5:50:2.6:2.6,0,121.4:5:0:-2.45:9.611\n5\t10756070\t276612:1\tC\tC[5:10756404[\t23\tPASS\tEVDNC=ASSMB;HOMSEQ=GC;MAPQ=60;MATEID=276612:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_5_10755501_10780501_80C;SPAN=334;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:58:23.3:23.3,0,122.3:12:0:-23.31:27.18\n5\t10756404\t276612:2\tG\t]5:10756070]G\t23\tPASS\tEVDNC=ASSMB;HOMSEQ=GC;MAPQ=60;MATEID=276612:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_5_10755501_10780501_80C;SPAN=334;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:58:23.3:23.3,0,122.3:12:0:-23.31:27.18\n5\t11160451\t276825:1\tA\tA[5:11399503[\t18\tPASS\tEVDNC=ASSMB;INSERTION=TTATCTCATACAAT;MAPQ=60;MATEID=276825:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_5_11392501_11417501_15C;SPAN=239052;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:27:18.8:18.8,0,48.5:8:0:-18.82:19.57\n5\t11399503\t276825:2\tC\t]5:11160451]C\t18\tPASS\tEVDNC=ASSMB;INSERTION=TTATCTCATACAAT;MAPQ=60;MATEID=276825:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_5_11392501_11417501_15C;SPAN=239052;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:27:18.8:18.8,0,48.5:8:0:-18.82:19.57\n5\t11578757\t276958:1\tT\t]5:11859207]T\t20\tPASS\tEVDNC=ASSMB;HOMSEQ=TTAA;MAPQ=60;MATEID=276958:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_5_11858001_11883001_108C;SPAN=280450;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:35:20:20,0,66.2:9:0:-19.87:21.36\n5\t11593958\t276916:1\tA\t]5:11696236]A\t47\tPASS\tEVDNC=ASSMB;HOMSEQ=ATAAAACT;MAPQ=60;MATEID=276916:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_5_11686501_11711501_17C;SPAN=102278;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:19:55:47.3:47.3,0,90.2:19:0:-47.26:48.03\n5\t11655906\t303817:1\tT\t[5:94472477[T\t23\tPASS\tDISC_MAPQ=255;EVDNC=ASDIS;MAPQ=60;MATEID=303817:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_5_94472001_94497001_10C;SPAN=82816571;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:10:0.5:23.6,0,0.5:6:4:-24.74:24.74\n5\t11696236\t276916:2\tT\tT[5:11593958[\t47\tPASS\tEVDNC=ASSMB;HOMSEQ=ATAAAACT;MAPQ=60;MATEID=276916:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_5_11686501_11711501_17C;SPAN=102278;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:19:55:47.3:47.3,0,90.2:19:0:-47.26:48.03\n5\t11859207\t276958:2\tA\tA[5:11578757[\t20\tPASS\tEVDNC=ASSMB;HOMSEQ=TTAA;MAPQ=60;MATEID=276958:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_5_11858001_11883001_108C;SPAN=280450;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:35:20:20,0,66.2:9:0:-19.87:21.36\n5\t12186388\t277088:1\tT\tT[5:12186680[\t10\tPASS\tEVDNC=ASSMB;HOMSEQ=AGTATTTTGTTCT;MAPQ=60;MATEID=277088:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_5_12176501_12201501_61C;SPAN=292;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:6:35:10.1:10.1,0,76.1:6:0:-9.968:13.04\n5\t12186680\t277088:2\tA\t]5:12186388]A\t10\tPASS\tEVDNC=ASSMB;HOMSEQ=AGTATTTTGTTCT;MAPQ=60;MATEID=277088:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_5_12176501_12201501_61C;SPAN=292;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:6:35:10.1:10.1,0,76.1:6:0:-9.968:13.04\n5\t13416495\t277704:1\tC\tC[5:13422742[\t92\tPASS\tEVDNC=ASSMB;HOMSEQ=GAAAATCACGTCAACC;MAPQ=60;MATEID=277704:2;MATENM=6;NM=0;NUMPARTS=2;SCTG=c_5_13401501_13426501_95C;SPAN=6247;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:29:31:8.4:92.4,8.4,0:29:0:-92.42:92.42\n5\t13422742\t277704:2\tG\t]5:13416495]G\t92\tPASS\tEVDNC=ASSMB;HOMSEQ=GAAAATCACGTCAACC;MAPQ=60;MATEID=277704:1;MATENM=0;NM=6;NUMPARTS=2;SCTG=c_5_13401501_13426501_95C;SPAN=6247;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:29:31:8.4:92.4,8.4,0:29:0:-92.42:92.42\n5\t16124701\t278656:1\tA\tA[5:16125383[\t15\tPASS\tEVDNC=ASSMB;INSERTION=TAGAA;MAPQ=60;MATEID=278656:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_5_16121001_16146001_70C;SPAN=682;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:63:15.5:15.5,0,140.9:10:0:-15.3:21.37\n5\t16125383\t278656:2\tC\t]5:16124701]C\t15\tPASS\tEVDNC=ASSMB;INSERTION=TAGAA;MAPQ=60;MATEID=278656:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_5_16121001_16146001_70C;SPAN=682;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:63:15.5:15.5,0,140.9:10:0:-15.3:21.37\n5\t16556459\t278904:1\tT\t]5:16743998]T\t22\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=T;MAPQ=60;MATEID=278904:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_5_16733501_16758501_7C;SPAN=187539;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:39:22.1:22.1,0,74.9:5:6:-22.05:23.72\n5\t16743998\t278904:2\tT\tT[5:16556459[\t22\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=T;MAPQ=60;MATEID=278904:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_5_16733501_16758501_7C;SPAN=187539;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:39:22.1:22.1,0,74.9:5:6:-22.05:23.72\n5\t17508114\t279336:1\tC\t]5:17621777]C\t15\tPASS\tDISC_MAPQ=45;EVDNC=DSCRD;IMPRECISE;MAPQ=45;MATEID=279336:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:17508114(-)-5:17621777(+)__5_17615501_17640501D;SPAN=113663;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:39:15.5:15.5,0,81.5:0:8:-15.45:18.09\n5\t17508349\t279337:1\tG\tG[5:17622087[\t50\tPASS\tDISC_MAPQ=43;EVDNC=DSCRD;IMPRECISE;MAPQ=43;MATEID=279337:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:17508349(+)-5:17622087(-)__5_17615501_17640501D;SPAN=113738;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:18:34:33.5:50,0,33.5:0:18:-49.98:49.98\n5\t17621777\t279336:2\tT\tT[5:17508114[\t15\tPASS\tDISC_MAPQ=54;EVDNC=DSCRD;IMPRECISE;MAPQ=54;MATEID=279336:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:17508114(-)-5:17621777(+)__5_17615501_17640501D;SPAN=113663;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:39:15.5:15.5,0,81.5:0:8:-15.45:18.09\n5\t17622087\t279337:2\tC\t]5:17508349]C\t50\tPASS\tDISC_MAPQ=58;EVDNC=DSCRD;IMPRECISE;MAPQ=58;MATEID=279337:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:17508349(+)-5:17622087(-)__5_17615501_17640501D;SPAN=113738;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:18:34:33.5:50,0,33.5:0:18:-49.98:49.98\n5\t19375266\t280181:1\tA\tA[5:19376287[\t99\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=280181:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:19375266(+)-5:19376287(-)__5_19355001_19380001D;SPAN=1021;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:44:12:12.3:135.3,12.3,0:0:44:-135.3:135.3\n5\t19376287\t280181:2\tC\t]5:19375266]C\t99\tPASS\tDISC_MAPQ=58;EVDNC=DSCRD;IMPRECISE;MAPQ=58;MATEID=280181:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:19375266(+)-5:19376287(-)__5_19355001_19380001D;SPAN=1021;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:44:12:12.3:135.3,12.3,0:0:44:-135.3:135.3\n5\t20832371\t280763:1\tT\t[5:34371648[T\t17\tPASS\tDISC_MAPQ=59;EVDNC=DSCRD;IMPRECISE;MAPQ=59;MATEID=280763:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:20832371(-)-5:34371648(-)__5_20825001_20850001D;SPAN=13539277;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:33:17.3:17.3,0,63.5:0:8:-17.13:18.75\n5\t20834797\t280766:1\tT\tT]5:34371504]\t10\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=280766:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:20834797(+)-5:34371504(+)__5_20825001_20850001D;SPAN=13536707;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:57:10.4:10.4,0,132.5:0:8:-10.39:16.63\n5\t20849244\t280776:1\tT\t]5:20854316]T\t32\tPASS\tDISC_MAPQ=9;EVDNC=ASDIS;HOMSEQ=TG;MAPQ=19;MATEID=280776:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_5_20825001_20850001_93C;SPAN=5072;SUBN=1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:48:32.9:32.9,0,85.7:10:10:-32.72:34.13\n5\t20854316\t280776:2\tG\tG[5:20849244[\t32\tPASS\tDISC_MAPQ=13;EVDNC=ASDIS;HOMSEQ=TG;MAPQ=43;MATEID=280776:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_5_20825001_20850001_93C;SPAN=5072;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:48:32.9:32.9,0,85.7:10:10:-32.72:34.13\n5\t21149159\t280926:1\tC\t]5:21172268]C\t75\tPASS\tEVDNC=ASSMB;HOMSEQ=CA;MAPQ=60;MATEID=280926:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_5_21168001_21193001_24C;SPAN=23109;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:26:38:19.1:75.2,0,19.1:26:0:-76.88:76.88\n5\t21172268\t280926:2\tA\tA[5:21149159[\t75\tPASS\tEVDNC=ASSMB;HOMSEQ=CA;MAPQ=60;MATEID=280926:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_5_21168001_21193001_24C;SPAN=23109;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:26:38:19.1:75.2,0,19.1:26:0:-76.88:76.88\n5\t21207604\t280936:2\tT\t]4:79973439]T\t99\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=280936:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=4:79973439(+)-5:21207604(-)__5_21192501_21217501D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:34:36:9.9:108.9,9.9,0:0:34:-108.9:108.9\n5\t21450121\t281078:1\tT\tT[5:21452317[\t99\tPASS\tDISC_MAPQ=59;EVDNC=DSCRD;IMPRECISE;MAPQ=59;MATEID=281078:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:21450121(+)-5:21452317(-)__5_21437501_21462501D;SPAN=2196;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:42:6:11.7:128.7,11.7,0:0:42:-128.7:128.7\n5\t21452317\t281078:2\tT\t]5:21450121]T\t99\tPASS\tDISC_MAPQ=59;EVDNC=DSCRD;IMPRECISE;MAPQ=59;MATEID=281078:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:21450121(+)-5:21452317(-)__5_21437501_21462501D;SPAN=2196;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:42:6:11.7:128.7,11.7,0:0:42:-128.7:128.7\n5\t22796516\t281614:1\tT\tT[5:22796820[\t17\tPASS\tEVDNC=ASSMB;HOMSEQ=CAGATTTTTTATCTT;MAPQ=60;MATEID=281614:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_5_22785001_22810001_61C;SPAN=304;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:46:17:17,0,96.2:9:0:-16.78:20.14\n5\t22796820\t281614:2\tC\t]5:22796516]C\t17\tPASS\tEVDNC=ASSMB;HOMSEQ=CAGATTTTTTATCTT;MAPQ=60;MATEID=281614:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_5_22785001_22810001_61C;SPAN=304;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:46:17:17,0,96.2:9:0:-16.78:20.14\n5\t23902973\t282017:1\tC\tC[5:23905101[\t99\tPASS\tDISC_MAPQ=58;EVDNC=DSCRD;IMPRECISE;MAPQ=58;MATEID=282017:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:23902973(+)-5:23905101(-)__5_23887501_23912501D;SPAN=2128;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:40:12:11.1:122.1,11.1,0:0:40:-122.1:122.1\n5\t23905101\t282017:2\tA\t]5:23902973]A\t99\tPASS\tDISC_MAPQ=55;EVDNC=DSCRD;IMPRECISE;MAPQ=55;MATEID=282017:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:23902973(+)-5:23905101(-)__5_23887501_23912501D;SPAN=2128;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:40:12:11.1:122.1,11.1,0:0:40:-122.1:122.1\n5\t24370433\t282268:1\tT\tT[5:24373328[\t99\tPASS\tEVDNC=ASSMB;HOMSEQ=TAAAACAAAATTTTT;MAPQ=60;MATEID=282268:2;MATENM=3;NM=5;NUMPARTS=2;SCTG=c_5_24353001_24378001_2C;SPAN=2895;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:60:111:99:167,0,110.9:60:0:-167.4:167.4\n5\t24373328\t282268:2\tT\t]5:24370433]T\t99\tPASS\tEVDNC=ASSMB;HOMSEQ=TAAAACAAAATTTTT;MAPQ=60;MATEID=282268:1;MATENM=5;NM=3;NUMPARTS=2;SCTG=c_5_24353001_24378001_2C;SPAN=2895;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:60:111:99:167,0,110.9:60:0:-167.4:167.4\n5\t24776152\t282465:1\tT\t]5:24783207]T\t0\tPASS\tEVDNC=ASSMB;HOMSEQ=T;MAPQ=60;MATEID=282465:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_5_24769501_24794501_13C;SPAN=7055;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/0:7:85:0.6:0,0.6,214.5:7:0:0.7858:12.84\n5\t24783207\t282465:2\tT\tT[5:24776152[\t0\tPASS\tEVDNC=ASSMB;HOMSEQ=T;MAPQ=60;MATEID=282465:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_5_24769501_24794501_13C;SPAN=7055;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/0:7:85:0.6:0,0.6,214.5:7:0:0.7858:12.84\n5\t25623489\t282763:1\tA\t]5:25625607]A\t48\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;INSERTION=ACAATTAAACGCAATTAACCTCACAATTAA;MAPQ=60;MATEID=282763:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_5_25602501_25627501_20C;SPAN=2118;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:20:64:48.2:48.2,0,110.9:16:10:-48.03:49.48\n5\t25625607\t282763:2\tC\tC[5:25623489[\t48\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;INSERTION=ACAATTAAACGCAATTAACCTCACAATTAA;MAPQ=60;MATEID=282763:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_5_256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1_28935001D;SPAN=2459;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:28:28.4:28.4,0,41.6:0:11:-28.44:28.58\n5\t31190135\t285245:1\tT\t[5:31191075[T\t99\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TT;MAPQ=60;MATEID=285245:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_5_31188501_31213501_4C;SPAN=940;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:47:50:13.8:151.8,13.8,0:33:31:-151.8:151.8\n5\t31191075\t285245:2\tA\t[5:31190135[A\t99\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TT;MAPQ=60;MATEID=285245:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_5_31188501_31213501_4C;SPAN=940;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:47:50:13.8:151.8,13.8,0:33:31:-151.8:151.8\n5\t33830191\t286429:1\tA\t]5:34171242]A\t17\tPASS\tEVDNC=ASSMB;INSERTION=T;MAPQ=60;MATEID=286429:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_5_34153001_34178001_36C;SPAN=341051;SUBN=1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:7:20:17.6:17.6,0,30.8:7:0:-17.49:17.74\n5\t34171242\t286429:2\tA\tA[5:33830191[\t17\tPASS\tEVDNC=ASSMB;INSERTION=T;MAPQ=60;MATEID=286429:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_5_34153001_34178001_36C;SPAN=341051;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:7:20:17.6:17.6,0,30.8:7:0:-17.49:17.74\n5\t34304693\t286531:1\tT\tT[5:34307800[\t12\tPASS\tDISC_MAPQ=22;EVDNC=ASDIS;HOMSEQ=ATTTTTTTT;MAPQ=60;MATEID=286531:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_5_34300001_34325001_48C;SPAN=3107;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:60:12.8:12.8,0,138.2:5:6:-12.84:18.99\n5\t34307800\t286531:2\tA\t]5:34304693]A\t12\tPASS\tDISC_MAPQ=31;EVDNC=ASDIS;HOMSEQ=ATTTTTTTT;MAPQ=60;MATEID=286531:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_5_34300001_34325001_48C;SPAN=3107;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:60:12.8:12.8,0,138.2:5:6:-12.84:18.99\n5\t34371504\t280766:2\tC\tC]5:20834797]\t10\tPASS\tDISC_MAPQ=29;EVDNC=DSCRD;IMPRECISE;MAPQ=29;MATEID=280766:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:20834797(+)-5:34371504(+)__5_20825001_20850001D;SPAN=13536707;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:57:10.4:10.4,0,132.5:0:8:-10.39:16.63\n5\t34371648\t280763:2\tG\t[5:20832371[G\t17\tPASS\tDISC_MAPQ=50;EVDNC=DSCRD;IMPRECISE;MAPQ=50;MATEID=280763:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:20832371(-)-5:34371648(-)__5_20825001_20850001D;SPAN=13539277;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:33:17.3:17.3,0,63.5:0:8:-17.13:18.75\n5\t35191048\t286918:1\tC\tC[5:35191370[\t16\tPASS\tEVDNC=ASSMB;HOMSEQ=CAGATGTGTTATTTTC;MAPQ=60;MATEID=286918:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_5_35182001_35207001_0C;SPAN=322;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:59:16.4:16.4,0,131.9:10:0:-16.43:21.68\n5\t35191370\t286918:2\tC\t]5:35191048]C\t16\tPASS\tEVDNC=ASSMB;HOMSEQ=CAGATGTGTTATTTTC;MAPQ=60;MATEID=286918:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_5_35182001_35207001_0C;SPAN=322;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:59:16.4:16.4,0,131.9:10:0:-16.43:21.68\n5\t35614083\t287048:1\tG\tG[5:35614385[\t30\tPASS\tEVDNC=ASSMB;HOMSEQ=AAAAAATTGAGG;MAPQ=60;MATEID=287048:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_5_35598501_35623501_58C;SPAN=302;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:34:30.2:30.2,0,53.3:12:0:-30.06:30.47\n5\t35614385\t287048:2\tA\t]5:35614083]A\t30\tPASS\tEVDNC=ASSMB;HOMSEQ=AAAAAATTGAGG;MAPQ=60;MATEID=287048:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_5_35598501_35623501_58C;SPAN=302;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:34:30.2:30.2,0,53.3:12:0:-30.06:30.47\n5\t37293717\t287660:1\tT\tT[5:37294029[\t99\tPASS\tEVDNC=ASSMB;HOMSEQ=TAAAGCAAATGATGATTCTT;MAPQ=60;MATEID=287660:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_5_37289001_37314001_85C;SPAN=312;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:41:43:12:132,12,0:41:0:-132:132\n5\t37294029\t287660:2\tT\t]5:37293717]T\t99\tPASS\tEVDNC=ASSMB;HOMSEQ=TAAAGCAAATGATGATTCTT;MAPQ=60;MATEID=287660:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_5_37289001_37314001_85C;SPAN=312;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:41:43:12:132,12,0:41:0:-132:132\n5\t39787650\t288543:1\tA\t]9:7741406]A\t64\tPASS\tDISC_MAPQ=17;EVDNC=ASDIS;INSERTION=GAGTT;MAPQ=26;MATEID=288543:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_5_39763501_39788501_1C;SPAN=-1;SUBN=1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:22:28:5.3:64.7,0,5.3:20:12:-67.65:67.65\n5\t40662832\t288928:1\tT\tT]5:40709960]\t29\tPASS\tDISC_MAPQ=57;EVDNC=DSCRD;IMPRECISE;MAPQ=57;MATEID=288928:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:40662832(+)-5:40709960(+)__5_40645501_40670501D;SPAN=47128;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:10:10:2.7:29.7,2.7,0:0:10:-29.71:29.71\n5\t40709960\t288928:2\tA\tA]5:40662832]\t29\tPASS\tDISC_MAPQ=35;EVDNC=DSCRD;IMPRECISE;MAPQ=35;MATEID=288928:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:40662832(+)-5:40709960(+)__5_40645501_40670501D;SPAN=47128;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:10:10:2.7:29.7,2.7,0:0:10:-29.71:29.71\n5\t40794513\t288988:1\tT\tT[5:40794877[\t85\tPASS\tEVDNC=ASSMB;INSERTION=AT;MAPQ=60;MATEID=288988:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_5_40792501_40817501_91C;SPAN=364;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:28:19:7.8:85.8,7.8,0:28:0:-85.82:85.82\n5\t40794877\t288988:2\tT\t]5:40794513]T\t85\tPASS\tEVDNC=ASSMB;INSERTION=AT;MAPQ=60;MATEID=288988:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_5_40792501_40817501_91C;SPAN=364;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:28:19:7.8:85.8,7.8,0:28:0:-85.82:85.82\n5\t41599348\t289232:1\tA\tA[5:41600022[\t29\tPASS\tEVDNC=ASSMB;HOMSEQ=AGAAA;MAPQ=60;MATEID=289232:2;MATENM=1;NM=2;NUMPARTS=2;SCTG=c_5_41576501_41601501_158C;SPAN=674;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:37:29.3:29.3,0,62.3:12:0:-29.21:29.92\n5\t41600022\t289232:2\tA\t]5:41599348]A\t29\tPASS\tEVDNC=ASSMB;HOMSEQ=AGAAA;MAPQ=60;MATEID=289232:1;MATENM=2;NM=1;NUMPARTS=2;SCTG=c_5_41576501_41601501_158C;SPAN=674;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:37:29.3:29.3,0,62.3:12:0:-29.21:29.92\n5\t41603901\t289246:1\tA\tA[5:41604211[\t23\tPASS\tEVDNC=ASSMB;HOMSEQ=AACTCTGAGATGA;MAPQ=60;MATEID=289246:2;MATENM=4;NM=2;NUMPARTS=2;SCTG=c_5_41601001_41626001_59C;SPAN=310;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:34:23.6:23.6,0,59.9:10:0:-23.45:24.42\n5\t41604211\t289246:2\tA\t]5:41603901]A\t23\tPASS\tEVDNC=ASSMB;HOMSEQ=AACTCTGAGATGA;MAPQ=60;MATEID=289246:1;MATENM=2;NM=4;NUMPARTS=2;SCTG=c_5_41601001_41626001_59C;SPAN=310;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:34:23.6:23.6,0,59.9:10:0:-23.45:24.42\n5\t42165839\t289387:1\tT\tT[5:42167668[\t99\tPASS\tEVDNC=ASSMB;HOMSEQ=TTAAAACTTTGTT;MAPQ=60;MATEID=289387:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_5_42164501_42189501_125C;SPAN=1829;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:34:32:9.3:102.3,9.3,0:34:0:-102.3:102.3\n5\t42167668\t289387:2\tT\t]5:42165839]T\t99\tPASS\tEVDNC=ASSMB;HOMSEQ=TTAAAACTTTGTT;MAPQ=60;MATEID=289387:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_5_42164501_42189501_125C;SPAN=1829;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:34:32:9.3:102.3,9.3,0:34:0:-102.3:102.3\n5\t43063268\t289697:1\tG\t]6:51379339]G\t23\tPASS\tDISC_MAPQ=60;EVDNC=TSI_L;HOMSEQ=AAAGAAAG;INSERTION=GAA;MAPQ=60;MATEID=289697:2;MATENM=0;NM=6;NUMPARTS=3;REPSEQ=AAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGG;SCTG=c_5_43046501_43071501_75C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:19:8:4.8:23.4,4.8,0:8:11:-23.48:23.48\n5\t43086248\t409531:1\tC\t[7:80914418[C\t15\tPASS\tDISC_MAPQ=36;EVDNC=DSCRD;IMPRECISE;MAPQ=36;MATEID=409531:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:43086248(-)-7:80914418(-)__7_80899001_80924001D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:63:15.5:15.5,0,140.9:0:10:-15.3:21.37\n5\t43616951\t290284:1\tA\t]5:44910547]A\t37\tPASS\tEVDNC=ASSMB;HOMSEQ=AAA;MAPQ=60;MATEID=290284:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_5_44908501_44933501_7C;SPAN=1293596;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:21:14:37.1,0,14:13:0:-37.47:37.47\n5\t44910547\t290284:2\tA\tA[5:43616951[\t37\tPASS\tEVDNC=ASSMB;HOMSEQ=AAA;MAPQ=60;MATEID=290284:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_5_44908501_44933501_7C;SPAN=1293596;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:21:14:37.1,0,14:13:0:-37.47:37.47\n5\t46144117\t290591:1\tG\tG[5:46145889[\t99\tPASS\tEVDNC=ASSMB;INSERTION=GTGAAAAA;MAPQ=60;MATEID=290591:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_5_46133501_46158501_27C;SPAN=1772;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:35:25:9.6:105.6,9.6,0:35:0:-105.6:105.6\n5\t46145889\t290591:2\tG\t]5:46144117]G\t99\tPASS\tEVDNC=ASSMB;INSERTION=GTGAAAAA;MAPQ=60;MATEID=290591:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_5_46133501_46158501_27C;SPAN=1772;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:35:25:9.6:105.6,9.6,0:35:0:-105.6:105.6\n5\t46164007\t290597:1\tA\tA[5:46164338[\t94\tPASS\tEVDNC=ASSMB;HOMSEQ=AAAAACTAGA;MAPQ=60;MATEID=290597:2;MATENM=7;NM=0;NUMPARTS=2;SCTG=c_5_46158001_46183001_87C;SPAN=331;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:32:39:2.3:94.7,0,2.3:32:0:-99.78:99.78\n5\t46164338\t290597:2\tA\t]5:46164007]A\t94\tPASS\tEVDNC=ASSMB;HOMSEQ=AAAAACTAGA;MAPQ=60;MATEID=290597:1;MATENM=0;NM=7;NUMPARTS=2;SCTG=c_5_46158001_46183001_87C;SPAN=331;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:32:39:2.3:94.7,0,2.3:32:0:-99.78:99.78\n5\t46270554\t290636:1\tT\tT[5:46275735[\t12\tPASS\tEVDNC=ASSMB;HOMSEQ=TTCT;MAPQ=60;MATEID=290636:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_5_46256001_46281001_34C;SPAN=5181;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:51:12.2:12.2,0,114.5:8:0:-12.07:17.05\n5\t46275735\t290636:2\tT\t]5:46270554]T\t12\tPASS\tEVDNC=ASSMB;HOMSEQ=TTCT;MAPQ=60;MATEID=290636:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_5_46256001_46281001_34C;SPAN=5181;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:51:12.2:12.2,0,114.5:8:0:-12.07:17.05\n5\t46405227\t290750:1\tT\tT[5:46410473[\t42\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=GACAGAAGCATTCTCAGAAACTTCTTTGTGATGTGTGCATT;MAPQ=60;MATEID=290750:2;MATENM=3;NM=1;NUMPARTS=2;SCTG=c_5_46403001_46428001_13C;SPAN=5246;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:16:38:42.2:42.2,0,52.1:8:11:-42.13:42.21\n5\t46410473\t290750:2\tG\t]5:46405227]G\t42\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=GACAGAAGCATTCTCAGAAACTTCTTTGTGATGTGTGCATT;MAPQ=60;MATEID=290750:1;MATENM=1;NM=3;NUMPARTS=2;SCTG=c_5_46403001_46428001_13C;SPAN=5246;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:16:38:42.2:42.2,0,52.1:8:11:-42.13:42.21\n5\t46491020\t290851:1\tA\t]5:46539787]A\t26\tPASS\tDISC_MAPQ=48;EVDNC=DSCRD;IMPRECISE;MAPQ=48;MATEID=290851:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:46491020(-)-5:46539787(+)__5_46476501_46501501D;SPAN=48767;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:9:8:2.4:26.4,2.4,0:0:9:-26.41:26.41\n5\t46539787\t290851:2\tT\tT[5:46491020[\t26\tPASS\tDISC_MAPQ=22;EVDNC=DSCRD;IMPRECISE;MAPQ=22;MATEID=290851:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:46491020(-)-5:46539787(+)__5_46476501_46501501D;SPAN=48767;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:9:8:2.4:26.4,2.4,0:0:9:-26.41:26.41\n5\t46540265\t291753:1\tA\t]5:46649184]A\t33\tPASS\tDISC_MAPQ=22;EVDNC=ASDIS;HOMSEQ=AAGCATTCTCAGAAACTTCTT;MAPQ=60;MATEID=291753:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_5_46648001_46673001_470C;SPAN=108919;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:11:5:3:33,3,0:8:3:-33.01:33.01\n5\t46565779\t291959:1\tT\tT[5:46736987[\t29\tPASS\tDISC_MAPQ=20;EVDNC=DSCRD;IMPRECISE;MAPQ=20;MATEID=291959:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:46565779(+)-5:46736987(-)__5_46721501_46746501D;SPAN=171208;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:10:2:2.7:29.7,2.7,0:0:10:-29.71:29.71\n5\t46571621\t291810:1\tG\tG[5:46689519[\t23\tPASS\tDISC_MAPQ=53;EVDNC=DSCRD;IMPRECISE;MAPQ=53;MATEID=291810:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:46571621(+)-5:46689519(-)__5_46672501_46697501D;SPAN=117898;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:10:0.5:23.6,0,0.5:0:8:-24.74:24.74\n5\t46649184\t291753:2\tT\tT[5:46540265[\t33\tPASS\tDISC_MAPQ=43;EVDNC=ASDIS;HOMSEQ=AAGCATTCTCAGAAACTTCTT;MAPQ=46;MATEID=291753:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_5_46648001_46673001_470C;SPAN=108919;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:11:5:3:33,3,0:8:3:-33.01:33.01\n5\t46658868\t292044:1\tA\t]5:46783997]A\t54\tPASS\tDISC_MAPQ=50;EVDNC=DSCRD;IMPRECISE;MAPQ=50;MATEID=292044:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:46658868(-)-5:46783997(+)__5_46770501_46795501D;SPAN=125129;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:19:29:18.2:54.5,0,18.2:0:19:-55.55:55.55\n5\t46659126\t291914:1\tG\tG[5:46708874[\t69\tPASS\tDISC_MAPQ=51;EVDNC=DSCRD;IMPRECISE;MAPQ=51;MATEID=291914:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:46659126(+)-5:46708874(-)__5_46697001_46722001D;SPAN=49748;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:23:20:6.3:69.3,6.3,0:0:23:-69.32:69.32\n5\t46689519\t291810:2\tT\t]5:46571621]T\t23\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=291810:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:46571621(+)-5:46689519(-)__5_46672501_46697501D;SPAN=117898;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:10:0.5:23.6,0,0.5:0:8:-24.74:24.74\n5\t46692541\t291853:1\tA\tA[5:46692991[\t89\tPASS\tDISC_MAPQ=47;EVDNC=ASDIS;HOMSEQ=AAACTAGACAGAAGCATTCTCAGAAACTGCTTTGTGATGTGTGCATTTAACTCACAGACTTGA;MAPQ=60;MATEID=291853:2;MATENM=3;NM=4;NUMPARTS=2;SCTG=c_5_46672501_46697501_418C;SPAN=450;SUBN=1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:29:28:8.1:89.1,8.1,0:22:11:-89.12:89.12\n5\t46692991\t291853:2\tA\t]5:46692541]A\t89\tPASS\tDISC_MAPQ=22;EVDNC=ASDIS;HOMSEQ=AAACTAGACAGAAGCATTCTCAGAAACTGCTTTGTGATGTGTGCATTTAACTCACAGACTTGA;MAPQ=0;MATEID=291853:1;MATENM=4;NM=3;NUMPARTS=2;SCTG=c_5_46672501_46697501_418C;SPAN=450;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:29:28:8.1:89.1,8.1,0:22:11:-89.12:89.12\n5\t46708874\t291914:2\tT\t]5:46659126]T\t69\tPASS\tDISC_MAPQ=52;EVDNC=DSCRD;IMPRECISE;MAPQ=52;MATEID=291914:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:46659126(+)-5:46708874(-)__5_46697001_46722001D;SPAN=49748;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:23:20:6.3:69.3,6.3,0:0:23:-69.32:69.32\n5\t46736987\t291959:2\tA\t]5:46565779]A\t29\tPASS\tDISC_MAPQ=22;EVDNC=DSCRD;IMPRECISE;MAPQ=22;MATEID=291959:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:46565779(+)-5:46736987(-)__5_46721501_46746501D;SPAN=171208;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:10:2:2.7:29.7,2.7,0:0:10:-29.71:29.71\n5\t46783997\t292044:2\tA\tA[5:46658868[\t54\tPASS\tDISC_MAPQ=56;EVDNC=DSCRD;IMPRECISE;MAPQ=56;MATEID=292044:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:46658868(-)-5:46783997(+)__5_46770501_46795501D;SPAN=125129;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:19:29:18.2:54.5,0,18.2:0:19:-55.55:55.55\n5\t46912885\t292214:1\tT\t]5:47020460]T\t75\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TAAAAACTAGACAGAAGCA;MAPQ=60;MATEID=292214:2;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_5_47015501_47040501_88C;SPAN=107575;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:25:8:6.9:75.9,6.9,0:21:4:-75.92:75.92\n5\t46926344\t292248:1\tC\t[5:47075336[C\t69\tPASS\tDISC_MAPQ=21;EVDNC=DSCRD;IMPRECISE;MAPQ=21;MATEID=292248:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:46926344(-)-5:47075336(-)__5_47064501_47089501D;SPAN=148992;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:23:3:6.3:69.3,6.3,0:0:23:-69.32:69.32\n5\t47020460\t292214:2\tA\tA[5:46912885[\t75\tPASS\tDISC_MAPQ=57;EVDNC=ASDIS;HOMSEQ=TAAAAACTAGACAGAAGCA;MAPQ=60;MATEID=292214:1;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_5_47015501_47040501_88C;SPAN=107575;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:25:8:6.9:75.9,6.9,0:21:4:-75.92:75.92\n5\t47075336\t292248:2\tC\t[5:46926344[C\t69\tPASS\tDISC_MAPQ=19;EVDNC=DSCRD;IMPRECISE;MAPQ=19;MATEID=292248:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:46926344(-)-5:47075336(-)__5_47064501_47089501D;SPAN=148992;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:23:3:6.3:69.3,6.3,0:0:23:-69.32:69.32\n5\t47172599\t847754:1\tT\t]19:24896904]T\t41\tPASS\tDISC_MAPQ=31;EVDNC=DSCRD;IMPRECISE;MAPQ=31;MATEID=847754:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:47172599(-)-19:24896904(+)__19_24892001_24917001D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:17:54:41:41,0,93.8:0:17:-40.94:42.13\n5\t49623939\t292697:2\tG\tG]1:123283955]\t33\tPASS\tDISC_MAPQ=18;EVDNC=DSCRD;IMPRECISE;MAPQ=18;MATEID=292697:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:123283955(+)-5:49623939(+)__5_49612501_49637501D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:11:9:3:33,3,0:0:11:-33.01:33.01\n5\t49691392\t292720:1\tC\t]5:49693519]C\t35\tPASS\tDISC_MAPQ=36;EVDNC=DSCRD;IMPRECISE;MAPQ=36;MATEID=292720:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:49691392(-)-5:49693519(+)__5_49686001_49711001D;SPAN=2127;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:26:29:35.6,0,29:0:13:-35.63:35.63\n5\t49693479\t292728:1\tG\tG[5:49702819[\t20\tPASS\tDISC_MAPQ=34;EVDNC=DSCRD;IMPRECISE;MAPQ=34;MATEID=292728:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:49693479(+)-5:49702819(-)__5_49686001_49711001D;SPAN=9340;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:32:20.9:20.9,0,57.2:0:9:-20.71:21.77\n5\t49693519\t292720:2\tT\tT[5:49691392[\t35\tPASS\tDISC_MAPQ=19;EVDNC=DSCRD;IMPRECISE;MAPQ=19;MATEID=292720:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:49691392(-)-5:49693519(+)__5_49686001_49711001D;SPAN=2127;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:26:29:35.6,0,29:0:13:-35.63:35.63\n5\t49702819\t292728:2\tT\t]5:49693479]T\t20\tPASS\tDISC_MAPQ=30;EVDNC=DSCRD;IMPRECISE;MAPQ=30;MATEID=292728:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:49693479(+)-5:49702819(-)__5_49686001_49711001D;SPAN=9340;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:32:20.9:20.9,0,57.2:0:9:-20.71:21.77\n5\t49723328\t293173:1\tC\t]5:49895193]C\t7\tPASS\tDISC_MAPQ=37;EVDNC=DSCRD;IMPRECISE;MAPQ=37;MATEID=293173:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:49723328(-)-5:49895193(+)__5_49882001_49907001D;SPAN=171865;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:68:7.4:7.4,0,162.5:0:8:-7.294:15.98\n5\t49770437\t293175:1\tG\t]5:49886143]G\t42\tPASS\tDISC_MAPQ=39;EVDNC=DSCRD;IMPRECISE;MAPQ=39;MATEID=293175:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:49770437(-)-5:49886143(+)__5_49882001_49907001D;SPAN=115706;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:14:5:3.9:42.9,3.9,0:0:14:-42.91:42.91\n5\t49800374\t293088:1\tT\tT[5:49853433[\t43\tPASS\tDISC_MAPQ=20;EVDNC=DSCRD;IMPRECISE;MAPQ=20;MATEID=293088:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:49800374(+)-5:49853433(-)__5_49833001_49858001D;SPAN=53059;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:15:23:13.4:43.1,0,13.4:0:15:-43.8:43.8\n5\t49816583\t293323:1\tA\tA[5:49957574[\t33\tPASS\tDISC_MAPQ=25;EVDNC=DSCRD;IMPRECISE;MAPQ=25;MATEID=293323:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:49816583(+)-5:49957574(-)__5_49955501_49980501D;SPAN=140991;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:11:11:3:33,3,0:0:11:-33.01:33.01\n5\t49853433\t293088:2\tA\t]5:49800374]A\t43\tPASS\tDISC_MAPQ=31;EVDNC=DSCRD;IMPRECISE;MAPQ=31;MATEID=293088:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:49800374(+)-5:49853433(-)__5_49833001_49858001D;SPAN=53059;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:15:23:13.4:43.1,0,13.4:0:15:-43.8:43.8\n5\t49853709\t293181:1\tT\tT[5:49895540[\t79\tPASS\tDISC_MAPQ=31;EVDNC=DSCRD;IMPRECISE;MAPQ=31;MATEID=293181:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:49853709(+)-5:49895540(-)__5_49882001_49907001D;SPAN=41831;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:26:5:7.2:79.2,7.2,0:0:26:-79.22:79.22\n5\t49886143\t293175:2\tG\tG[5:49770437[\t42\tPASS\tDISC_MAPQ=19;EVDNC=DSCRD;IMPRECISE;MAPQ=19;MATEID=293175:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:49770437(-)-5:49886143(+)__5_49882001_49907001D;SPAN=115706;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:14:5:3.9:42.9,3.9,0:0:14:-42.91:42.91\n5\t49895193\t293173:2\tG\tG[5:49723328[\t7\tPASS\tDISC_MAPQ=31;EVDNC=DSCRD;IMPRECISE;MAPQ=31;MATEID=293173:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:49723328(-)-5:49895193(+)__5_49882001_49907001D;SPAN=171865;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:68:7.4:7.4,0,162.5:0:8:-7.294:15.98\n5\t49895540\t293181:2\tG\t]5:49853709]G\t79\tPASS\tDISC_MAPQ=35;EVDNC=DSCRD;IMPRECISE;MAPQ=35;MATEID=293181:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:49853709(+)-5:49895540(-)__5_49882001_49907001D;SPAN=41831;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:26:5:7.2:79.2,7.2,0:0:26:-79.22:79.22\n5\t49937653\t293336:1\tG\tG[5:49958078[\t99\tPASS\tDISC_MAPQ=54;EVDNC=ASDIS;HOMSEQ=TAAAAACTAGAAAGAAG;MAPQ=60;MATEID=293336:2;MATENM=1;NM=4;NUMPARTS=2;SCTG=c_5_49955501_49980501_848C;SPAN=20425;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:45:9:12.6:138.6,12.6,0:40:12:-138.6:138.6\n5\t49957574\t293323:2\tT\t]5:49816583]T\t33\tPASS\tDISC_MAPQ=38;EVDNC=DSCRD;IMPRECISE;MAPQ=38;MATEID=293323:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:49816583(+)-5:49957574(-)__5_49955501_49980501D;SPAN=140991;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:11:11:3:33,3,0:0:11:-33.01:33.01\n5\t49958078\t293336:2\tT\t]5:49937653]T\t99\tPASS\tDISC_MAPQ=55;EVDNC=ASDIS;HOMSEQ=TAAAAACTAGAAAGAAG;MAPQ=60;MATEID=293336:1;MATENM=4;NM=1;NUMPARTS=2;SCTG=c_5_49955501_49980501_848C;SPAN=20425;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:45:9:12.6:138.6,12.6,0:40:12:-138.6:138.6\n5\t51925610\t201766:2\tC\t[3:166722402[C\t57\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=201766:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=3:166722402(-)-5:51925610(-)__3_166698001_166723001D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:20:31:17.9:57.5,0,17.9:0:20:-58.24:58.24\n5\t53611921\t686826:1\tA\tA]14:20254838]\t36\tPASS\tDISC_MAPQ=48;EVDNC=ASDIS;INSERTION=CAACTT;MAPQ=60;MATEID=686826:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_20237001_20262001_59C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:11:12:3.3:36.3,3.3,0:7:4:-35.86:35.86\n5\t53826784\t294974:1\tG\t[5:53829682[G\t92\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;INSERTION=TAAT;MAPQ=60;MATEID=294974:2;MATENM=4;NM=0;NUMPARTS=2;SCTG=c_5_53826501_53851501_3C;SPAN=2898;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:30:28:8.4:92.4,8.4,0:25:6:-92.42:92.42\n5\t53826933\t294975:1\tG\tG]5:53829655]\t85\tPASS\tEVDNC=ASSMB;INSERTION=CTAACTGAA;MAPQ=60;MATEID=294975:2;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_5_53826501_53851501_1C;SPAN=2722;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:27:28:7.8:85.8,7.8,0:27:0:-85.82:85.82\n5\t53829655\t294975:2\tA\tA]5:53826933]\t85\tPASS\tEVDNC=ASSMB;INSERTION=CTAACTGAA;MAPQ=60;MATEID=294975:1;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_5_53826501_53851501_1C;SPAN=2722;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:27:28:7.8:85.8,7.8,0:27:0:-85.82:85.82\n5\t53829682\t294974:2\tT\t[5:53826784[T\t92\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;INSERTION=TAAT;MAPQ=60;MATEID=294974:1;MATENM=0;NM=4;NUMPARTS=2;SCTG=c_5_53826501_53851501_3C;SPAN=2898;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:30:28:8.4:92.4,8.4,0:25:6:-92.42:92.42\n5\t56133424\t295612:1\tG\tG[5:56134520[\t82\tPASS\tDISC_MAPQ=54;EVDNC=ASDIS;HOMSEQ=AGTGAGCCGAGATCGTGTCATTGCACTCCAGCCTGGGTGACAGAG;MAPQ=60;MATEID=295612:2;MATENM=1;NM=3;NUMPARTS=2;SCTG=c_5_56129501_56154501_23C;SPAN=1096;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:27:3:7.5:82.5,7.5,0:9:21:-82.52:82.52\n5\t56134520\t295612:2\tA\t]5:56133424]A\t82\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AGTGAGCCGAGATCGTGTCATTGCACTCCAGCCTGGGTGACAGAG;MAPQ=60;MATEID=295612:1;MATENM=3;NM=1;NUMPARTS=2;SCTG=c_5_56129501_56154501_23C;SPAN=1096;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:27:3:7.5:82.5,7.5,0:9:21:-82.52:82.52\n5\t56152290\t295608:2\tA\t[1:150621245[A\t26\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=295608:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:150621245(-)-5:56152290(-)__5_56129501_56154501D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:12:3.2:26.3,0,3.2:0:9:-27.29:27.29\n5\t58027770\t296201:1\tG\tG[5:58037951[\t75\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=296201:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:58027770(+)-5:58037951(-)__5_58016001_58041001D;SPAN=10181;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:25:5:6.9:75.9,6.9,0:0:25:-75.92:75.92\n5\t58037951\t296201:2\tG\t]5:58027770]G\t75\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=296201:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:58027770(+)-5:58037951(-)__5_58016001_58041001D;SPAN=10181;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:25:5:6.9:75.9,6.9,0:0:25:-75.92:75.92\n5\t58384174\t296299:1\tC\tC[5:58390275[\t99\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AAAAAACAC;MAPQ=60;MATEID=296299:2;MATENM=2;NM=11;NUMPARTS=2;SCTG=c_5_58359001_58384001_4C;SPAN=6101;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:39:0:10.8:118.8,10.8,0:27:18:-118.8:118.8\n5\t58390275\t296299:2\tA\t]5:58384174]A\t99\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AAAAAACAC;MAPQ=60;MATEID=296299:1;MATENM=11;NM=2;NUMPARTS=2;SCTG=c_5_58359001_58384001_4C;SPAN=6101;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:39:0:10.8:118.8,10.8,0:27:18:-118.8:118.8\n5\t59692316\t409711:1\tT\t[7:81172709[T\t59\tPASS\tDISC_MAPQ=50;EVDNC=DSCRD;IMPRECISE;MAPQ=50;MATEID=409711:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:59692316(-)-7:81172709(-)__7_81168501_81193501D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:20:12:5.4:59.4,5.4,0:0:20:-59.41:59.41\n5\t59692516\t409712:1\tG\tG]7:81172281]\t25\tPASS\tDISC_MAPQ=51;EVDNC=DSCRD;IMPRECISE;MAPQ=51;MATEID=409712:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:59692516(+)-7:81172281(+)__7_81168501_81193501D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:40:25.1:25.1,0,74.6:0:11:-25.07:26.48\n5\t60193637\t296744:1\tA\tA[5:60201074[\t25\tPASS\tDISC_MAPQ=49;EVDNC=DSCRD;IMPRECISE;MAPQ=49;MATEID=296744:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:60193637(+)-5:60201074(-)__5_60196501_60221501D;SPAN=7437;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:15:12.2:25.4,0,12.2:0:9:-25.74:25.74\n5\t60200548\t296747:1\tA\t]5:60201294]A\t28\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=296747:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:60200548(-)-5:60201294(+)__5_60196501_60221501D;SPAN=746;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:18:14.9:28.1,0,14.9:0:10:-28.08:28.08\n5\t60201074\t296744:2\tT\t]5:60193637]T\t25\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=296744:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:60193637(+)-5:60201074(-)__5_60196501_60221501D;SPAN=7437;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:15:12.2:25.4,0,12.2:0:9:-25.74:25.74\n5\t60201294\t296747:2\tA\tA[5:60200548[\t28\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=296747:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:60200548(-)-5:60201294(+)__5_60196501_60221501D;SPAN=746;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:18:14.9:28.1,0,14.9:0:10:-28.08:28.08\n5\t60633808\t296852:1\tG\t]5:60761656]G\t92\tPASS\tEVDNC=ASSMB;HOMSEQ=GTG;MAPQ=60;MATEID=296852:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_5_60760001_60785001_10C;SPAN=127848;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:30:24:8.4:92.4,8.4,0:30:0:-92.42:92.42\n5\t60706002\t296834:1\tG\tG[5:60707838[\t99\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=296834:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:60706002(+)-5:60707838(-)__5_60686501_60711501D;SPAN=1836;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:68:13:18.9:207.9,18.9,0:0:68:-208:208\n5\t60707838\t296834:2\tC\t]5:60706002]C\t99\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=296834:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:60706002(+)-5:60707838(-)__5_60686501_60711501D;SPAN=1836;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:68:13:18.9:207.9,18.9,0:0:68:-208:208\n5\t60761656\t296852:2\tG\tG[5:60633808[\t92\tPASS\tEVDNC=ASSMB;HOMSEQ=GTG;MAPQ=60;MATEID=296852:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_5_60760001_60785001_10C;SPAN=127848;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:30:24:8.4:92.4,8.4,0:30:0:-92.42:92.42\n5\t61453878\t297015:1\tC\tC[5:61458570[\t56\tPASS\tEVDNC=ASSMB;INSERTION=AGTGAGG;MAPQ=60;MATEID=297015:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_5_61446001_61471001_20C;SPAN=4692;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:17:19:5.1:56.1,5.1,0:17:0:-54.78:54.78\n5\t61458570\t297015:2\tC\t]5:61453878]C\t56\tPASS\tEVDNC=ASSMB;INSERTION=AGTGAGG;MAPQ=60;MATEID=297015:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_5_61446001_61471001_20C;SPAN=4692;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:17:19:5.1:56.1,5.1,0:17:0:-54.78:54.78\n5\t62354497\t297206:1\tT\t]5:62433917]T\t89\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;MAPQ=60;MATEID=297206:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_5_62426001_62451001_9C;SPAN=79420;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:29:22:8.1:89.1,8.1,0:16:21:-89.12:89.12\n5\t62433917\t297206:2\tG\tG[5:62354497[\t89\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;MAPQ=60;MATEID=297206:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_5_62426001_62451001_9C;SPAN=79420;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:29:22:8.1:89.1,8.1,0:16:21:-89.12:89.12\n5\t63277564\t297467:1\tC\tC[5:63614896[\t32\tPASS\tDISC_MAPQ=45;EVDNC=DSCRD;IMPRECISE;MAPQ=45;MATEID=297467:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:63277564(+)-5:63614896(-)__5_63602001_63627001D;SPAN=337332;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:15:5.6:32,0,5.6:0:11:-33.15:33.15\n5\t63614896\t297467:2\tC\t]5:63277564]C\t32\tPASS\tDISC_MAPQ=38;EVDNC=DSCRD;IMPRECISE;MAPQ=38;MATEID=297467:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:63277564(+)-5:63614896(-)__5_63602001_63627001D;SPAN=337332;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:15:5.6:32,0,5.6:0:11:-33.15:33.15\n5\t65172244\t297711:2\tC\tC]2:68687723]\t26\tPASS\tDISC_MAPQ=58;EVDNC=DSCRD;IMPRECISE;MAPQ=58;MATEID=297711:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=2:68687723(+)-5:65172244(+)__5_65170001_65195001D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:8:9:2.4:26.4,2.4,0:0:8:-25.7:25.7\n5\t73537389\t299585:1\tT\t]5:73672251]T\t22\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=299585:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:73537389(-)-5:73672251(+)__5_73671501_73696501D;SPAN=134862;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:16:15.5:22.1,0,15.5:0:8:-21.93:21.93\n5\t73672251\t299585:2\tA\tA[5:73537389[\t22\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=299585:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:73537389(-)-5:73672251(+)__5_73671501_73696501D;SPAN=134862;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:16:15.5:22.1,0,15.5:0:8:-21.93:21.93\n5\t77477364\t300231:1\tA\tA[5:77611313[\t23\tPASS\tDISC_MAPQ=20;EVDNC=DSCRD;IMPRECISE;MAPQ=20;MATEID=300231:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:77477364(+)-5:77611313(-)__5_77469001_77494001D;SPAN=133949;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:12:6.5:23,0,6.5:0:8:-23.49:23.49\n5\t77611313\t300231:2\tA\t]5:77477364]A\t23\tPASS\tDISC_MAPQ=20;EVDNC=DSCRD;IMPRECISE;MAPQ=20;MATEID=300231:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:77477364(+)-5:77611313(-)__5_77469001_77494001D;SPAN=133949;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:12:6.5:23,0,6.5:0:8:-23.49:23.49\n5\t78814094\t300539:1\tT\tT[5:78816047[\t72\tPASS\tDISC_MAPQ=57;EVDNC=DSCRD;IMPRECISE;MAPQ=57;MATEID=300539:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:78814094(+)-5:78816047(-)__5_78792001_78817001D;SPAN=1953;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:24:6:6.6:72.6,6.6,0:0:24:-72.62:72.62\n5\t78816047\t300539:2\tT\t]5:78814094]T\t72\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=300539:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:78814094(+)-5:78816047(-)__5_78792001_78817001D;SPAN=1953;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:24:6:6.6:72.6,6.6,0:0:24:-72.62:72.62\n5\t78980940\t300584:1\tT\tT[5:78981250[\t99\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=GAATTTCTAGTTCTT;MAPQ=60;MATEID=300584:2;MATENM=3;NM=2;NUMPARTS=2;SCTG=c_5_78963501_78988501_19C;SPAN=310;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:36:15:9.9:108.9,9.9,0:25:15:-108.9:108.9\n5\t78981250\t300584:2\tG\t]5:78980940]G\t99\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=GAATTTCTAGTTCTT;MAPQ=60;MATEID=300584:1;MATENM=2;NM=3;NUMPARTS=2;SCTG=c_5_78963501_78988501_19C;SPAN=310;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:36:15:9.9:108.9,9.9,0:25:15:-108.9:108.9\n5\t81712362\t301309:1\tA\tA[5:81712619[\t52\tPASS\tEVDNC=ASSMB;HOMSEQ=AAAAAATAAAGATTACA;MAPQ=60;MATEID=301309:2;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_5_81707501_81732501_9C;SPAN=257;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:18:14:4.8:52.8,4.8,0:18:0:-52.81:52.81\n5\t81712619\t301309:2\tA\t]5:81712362]A\t52\tPASS\tEVDNC=ASSMB;HOMSEQ=AAAAAATAAAGATTACA;MAPQ=60;MATEID=301309:1;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_5_81707501_81732501_9C;SPAN=257;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:18:14:4.8:52.8,4.8,0:18:0:-52.81:52.81\n5\t89611142\t302952:1\tA\t]5:89618185]A\t16\tPASS\tEVDNC=ASSMB;HOMSEQ=AT;MAPQ=52;MATEID=302952:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_5_89596501_89621501_23C;SPAN=7043;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:36:16.4:16.4,0,72.5:8:0:-16.29:18.4\n5\t89618185\t302952:2\tT\tT[5:89611142[\t16\tPASS\tEVDNC=ASSMB;HOMSEQ=AT;MAPQ=52;MATEID=302952:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_5_89596501_89621501_23C;SPAN=7043;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:36:16.4:16.4,0,72.5:8:0:-16.29:18.4\n5\t91204065\t303333:1\tA\tA[5:91206278[\t79\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=303333:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:91204065(+)-5:91206278(-)__5_91189001_91214001D;SPAN=2213;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:26:5:7.2:79.2,7.2,0:0:26:-79.22:79.22\n5\t91206278\t303333:2\tA\t]5:91204065]A\t79\tPASS\tDISC_MAPQ=58;EVDNC=DSCRD;IMPRECISE;MAPQ=58;MATEID=303333:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:91204065(+)-5:91206278(-)__5_91189001_91214001D;SPAN=2213;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:26:5:7.2:79.2,7.2,0:0:26:-79.22:79.22\n5\t91278320\t303358:1\tC\t]5:91280018]C\t61\tPASS\tDISC_MAPQ=51;EVDNC=ASDIS;HOMSEQ=C;MAPQ=60;MATEID=303358:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_5_91262501_91287501_8C;SPAN=1698;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:21:28:8.6:61.4,0,8.6:15:13:-63.69:63.69\n5\t91278885\t303359:1\tT\tT[5:91279170[\t82\tPASS\tDISC_MAPQ=54;EVDNC=ASDIS;HOMSEQ=TCTCTCTTT;MAPQ=60;MATEID=303359:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_5_91262501_91287501_27C;SPAN=285;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:27:21:7.5:82.5,7.5,0:15:16:-82.52:82.52\n5\t91279170\t303359:2\tT\t]5:91278885]T\t82\tPASS\tDISC_MAPQ=57;EVDNC=ASDIS;HOMSEQ=TCTCTCTTT;MAPQ=60;MATEID=303359:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_5_91262501_91287501_27C;SPAN=285;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:27:21:7.5:82.5,7.5,0:15:16:-82.52:82.52\n5\t91280018\t303358:2\tC\tC[5:91278320[\t61\tPASS\tDISC_MAPQ=53;EVDNC=ASDIS;HOMSEQ=C;MAPQ=60;MATEID=303358:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_5_91262501_91287501_8C;SPAN=1698;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:21:28:8.6:61.4,0,8.6:15:13:-63.69:63.69\n5\t94472477\t303817:2\tG\t[5:11655906[G\t23\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;MAPQ=60;MATEID=303817:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_5_94472001_94497001_10C;SPAN=82816571;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:10:0.5:23.6,0,0.5:6:4:-24.74:24.74\n5\t98524537\t916269:1\tA\tA]22:28669971]\t15\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=916269:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:98524537(+)-22:28669971(+)__22_28665001_28690001D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:74:15.5:15.5,0,170.6:0:11:-15.51:23.17\n5\t99009529\t304939:1\tG\tG[5:99011777[\t92\tPASS\tDISC_MAPQ=53;EVDNC=DSCRD;IMPRECISE;MAPQ=53;MATEID=304939:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:99009529(+)-5:99011777(-)__5_99004501_99029501D;SPAN=2248;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:31:4:8.4:92.4,8.4,0:0:31:-92.42:92.42\n5\t99011777\t304939:2\tC\t]5:99009529]C\t92\tPASS\tDISC_MAPQ=45;EVDNC=DSCRD;IMPRECISE;MAPQ=45;MATEID=304939:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:99009529(+)-5:99011777(-)__5_99004501_99029501D;SPAN=2248;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:31:4:8.4:92.4,8.4,0:0:31:-92.42:92.42\n5\t99532345\t305053:1\tT\tT[5:99533288[\t85\tPASS\tDISC_MAPQ=49;EVDNC=ASDIS;HOMSEQ=TGGTGAAACCCCGTCTCTACTAAAAATACAAAAATT;MAPQ=60;MATEID=305053:2;MATENM=7;NM=0;NUMPARTS=2;SCTG=c_5_99519001_99544001_64C;SPAN=943;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:28:9:7.8:85.8,7.8,0:15:14:-85.82:85.82\n5\t99533288\t305053:2\tT\t]5:99532345]T\t85\tPASS\tDISC_MAPQ=5;EVDNC=ASDIS;HOMSEQ=TGGTGAAACCCCGTCTCTACTAAAAATACAAAAATT;MAPQ=60;MATEID=305053:1;MATENM=0;NM=7;NUMPARTS=2;SCTG=c_5_99519001_99544001_64C;SPAN=943;SVT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GQ:PL:SR:DR:LR:LO\t0/1:19:23:0.2:56.3,0,0.2:19:0:-59.38:59.38\n5\t115422193\t308409:2\tC\t]5:115420818]C\t56\tPASS\tEVDNC=ASSMB;HOMSEQ=CTATCTCTTGTTTTCTT;MAPQ=60;MATEID=308409:1;MATENM=1;NM=7;NUMPARTS=2;SCTG=c_5_115419501_115444501_4C;SPAN=1375;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:19:23:0.2:56.3,0,0.2:19:0:-59.38:59.38\n5\t115842122\t57747:2\tC\tC]1:214483362]\t28\tPASS\tDISC_MAPQ=51;EVDNC=DSCRD;IMPRECISE;MAPQ=51;MATEID=57747:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:214483362(+)-5:115842122(+)__1_214473001_214498001D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:16:8.9:28.7,0,8.9:0:10:-28.89:28.89\n5\t115903112\t308531:1\tT\tT[5:115913380[\t25\tPASS\tDISC_MAPQ=25;EVDNC=DSCRD;IMPRECISE;MAPQ=25;MATEID=308531:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:115903112(+)-5:115913380(-)__5_115885001_115910001D;SPAN=10268;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:15:12.2:25.4,0,12.2:0:9:-25.74:25.74\n5\t115913380\t308531:2\tC\t]5:115903112]C\t25\tPASS\tDISC_MAPQ=31;EVDNC=DSCRD;IMPRECISE;MAPQ=31;MATEID=308531:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:115903112(+)-5:115913380(-)__5_115885001_115910001D;SPAN=10268;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:15:12.2:25.4,0,12.2:0:9:-25.74:25.74\n5\t117973459\t308983:1\tG\t]5:117973635]G\t13\tPASS\tEVDNC=ASSMB;INSERTION=TT;MAPQ=60;MATEID=308983:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_5_117967501_117992501_9C;SPAN=176;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:7:34:13.7:13.7,0,69.8:7:0:-13.55:15.84\n5\t117973635\t308983:2\tC\tC[5:117973459[\t13\tPASS\tEVDNC=ASSMB;INSERTION=TT;MAPQ=60;MATEID=308983:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_5_117967501_117992501_9C;SPAN=176;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:7:34:13.7:13.7,0,69.8:7:0:-13.55:15.84\n5\t119702489\t309320:1\tG\tG[5:119705996[\t46\tPASS\tDISC_MAPQ=53;EVDNC=DSCRD;IMPRECISE;MAPQ=53;MATEID=309320:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:119702489(+)-5:119705996(-)__5_119682501_119707501D;SPAN=3507;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:15:3:4.2:46.2,4.2,0:0:15:-46.21:46.21\n5\t119705996\t309320:2\tG\t]5:119702489]G\t46\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=309320:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:119702489(+)-5:119705996(-)__5_119682501_119707501D;SPAN=3507;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:15:3:4.2:46.2,4.2,0:0:15:-46.21:46.21\n5\t120044567\t309394:1\tG\tG[5:120046985[\t62\tPASS\tDISC_MAPQ=56;EVDNC=DSCRD;IMPRECISE;MAPQ=56;MATEID=309394:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:120044567(+)-5:120046985(-)__5_120025501_120050501D;SPAN=2418;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:21:5:5.7:62.7,5.7,0:0:21:-62.72:62.72\n5\t120046985\t309394:2\tT\t]5:120044567]T\t62\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=309394:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:120044567(+)-5:120046985(-)__5_120025501_120050501D;SPAN=2418;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:21:5:5.7:62.7,5.7,0:0:21:-62.72:62.72\n5\t128071820\t310985:1\tC\tC[5:128075224[\t75\tPASS\tDISC_MAPQ=57;EVDNC=DSCRD;IMPRECISE;MAPQ=57;MATEID=310985:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:128071820(+)-5:128075224(-)__5_128061501_128086501D;SPAN=3404;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:25:4:6.9:75.9,6.9,0:0:25:-75.92:75.92\n5\t128075224\t310985:2\tA\t]5:128071820]A\t75\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=310985:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:128071820(+)-5:128075224(-)__5_128061501_128086501D;SPAN=3404;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:25:4:6.9:75.9,6.9,0:0:25:-75.92:75.92\n5\t133583356\t311921:1\tA\tA[5:133589299[\t75\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=311921:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:133583356(+)-5:133589299(-)__5_133574001_133599001D;SPAN=5943;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:25:6:6.9:75.9,6.9,0:0:25:-75.92:75.92\n5\t133589299\t311921:2\tA\t]5:133583356]A\t75\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=311921:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:133583356(+)-5:133589299(-)__5_133574001_133599001D;SPAN=5943;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:25:6:6.9:75.9,6.9,0:0:25:-75.92:75.92\n5\t137519022\t312619:1\tG\tG[5:137520709[\t69\tPASS\tDISC_MAPQ=53;EVDNC=DSCRD;IMPRECISE;MAPQ=53;MATEID=312619:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:137519022(+)-5:137520709(-)__5_137518501_137543501D;SPAN=1687;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:23:5:6.3:69.3,6.3,0:0:23:-69.32:69.32\n5\t137520709\t312619:2\tG\t]5:137519022]G\t69\tPASS\tDISC_MAPQ=51;EVDNC=DSCRD;IMPRECISE;MAPQ=51;MATEID=312619:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:137519022(+)-5:137520709(-)__5_137518501_137543501D;SPAN=1687;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:23:5:6.3:69.3,6.3,0:0:23:-69.32:69.32\n5\t139452687\t313069:1\tN\tN[5:139453686[\t42\tPASS\tDISC_MAPQ=46;EVDNC=DSCRD;IMPRECISE;MAPQ=46;MATEID=313069:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:139452687(+)-5:139453686(-)__5_139454001_139479001D;SPAN=999;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:14:0:3.9:42.9,3.9,0:0:14:-42.91:42.91\n5\t139453686\t313069:2\tT\t]5:139452687]T\t42\tPASS\tDISC_MAPQ=53;EVDNC=DSCRD;IMPRECISE;MAPQ=53;MATEID=313069:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:139452687(+)-5:139453686(-)__5_139454001_139479001D;SPAN=999;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:14:0:3.9:42.9,3.9,0:0:14:-42.91:42.91\n5\t141632067\t313544:1\tA\t]5:142199822]A\t29\tPASS\tDISC_MAPQ=40;EVDNC=DSCRD;IMPRECISE;MAPQ=40;MATEID=313544:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:141632067(-)-5:142199822(+)__5_142198001_142223001D;SPAN=567755;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:10:6:2.7:29.7,2.7,0:0:10:-29.71:29.71\n5\t141632296\t313545:1\tA\tA[5:142199971[\t29\tPASS\tDISC_MAPQ=38;EVDNC=DSCRD;IMPRECISE;MAPQ=38;MATEID=313545:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:141632296(+)-5:142199971(-)__5_142198001_142223001D;SPAN=567675;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:10:7:2.7:29.7,2.7,0:0:10:-29.71:29.71\n5\t142077508\t677548:1\tA\tA[13:81793562[\t46\tPASS\tDISC_MAPQ=30;EVDNC=DSCRD;IMPRECISE;MAPQ=30;MATEID=677548:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:142077508(+)-13:81793562(-)__13_81781001_81806001D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:16:16:4.2:46.2,4.2,0:0:16:-46.21:46.21\n5\t142199822\t313544:2\tT\tT[5:141632067[\t29\tPASS\tDISC_MAPQ=54;EVDNC=DSCRD;IMPRECISE;MAPQ=54;MATEID=313544:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:141632067(-)-5:142199822(+)__5_142198001_142223001D;SPAN=567755;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:10:6:2.7:29.7,2.7,0:0:10:-29.71:29.71\n5\t142199971\t313545:2\tA\t]5:141632296]A\t29\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=313545:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:141632296(+)-5:142199971(-)__5_142198001_142223001D;SPAN=567675;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:10:7:2.7:29.7,2.7,0:0:10:-29.71:29.71\n5\t144132924\t313823:1\tA\t]5:144135488]A\t49\tPASS\tEVDNC=ASSMB;HOMSEQ=AG;MAPQ=60;MATEID=313823:2;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_5_144133501_144158501_0C;SPAN=2564;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:17:15:4.5:49.5,4.5,0:17:0:-49.51:49.51\n5\t144133302\t313820:1\tG\tG[5:144135483[\t89\tPASS\tEVDNC=ASSMB;INSERTION=GAATAAGCTC;MAPQ=60;MATEID=313820:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_5_144109001_144134001_1C;SPAN=2181;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:29:21:8.1:89.1,8.1,0:29:0:-89.12:89.12\n5\t144135483\t313820:2\tT\t]5:144133302]T\t89\tPASS\tEVDNC=ASSMB;INSERTION=GAATAAGCTC;MAPQ=60;MATEID=313820:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_5_144109001_144134001_1C;SPAN=2181;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:29:21:8.1:89.1,8.1,0:29:0:-89.12:89.12\n5\t144135488\t313823:2\tG\tG[5:144132924[\t49\tPASS\tEVDNC=ASSMB;HOMSEQ=AG;MAPQ=60;MATEID=313823:1;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_5_144133501_144158501_0C;SPAN=2564;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:17:15:4.5:49.5,4.5,0:17:0:-49.51:49.51\n5\t149173741\t603835:1\tG\t[11:99733408[G\t42\tPASS\tDISC_MAPQ=34;EVDNC=ASDIS;HOMSEQ=G;MAPQ=45;MATEID=603835:2;MATENM=13;NM=0;NUMPARTS=2;SCTG=c_11_99715001_99740001_7C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:14:5:3.9:42.9,3.9,0:9:6:-42.91:42.91\n5\t152076983\t315337:1\tA\tA[5:152082886[\t71\tPASS\tDISC_MAPQ=57;EVDNC=DSCRD;IMPRECISE;MAPQ=57;MATEID=315337:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:152076983(+)-5:152082886(-)__5_152071501_152096501D;SPAN=5903;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:25:40:28.4:71.3,0,28.4:0:25:-72.23:72.23\n5\t152082886\t315337:2\tA\t]5:152076983]A\t71\tPASS\tDISC_MAPQ=57;EVDNC=DSCRD;IMPRECISE;MAPQ=57;MATEID=315337:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:152076983(+)-5:152082886(-)__5_152071501_152096501D;SPAN=5903;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:25:40:28.4:71.3,0,28.4:0:25:-72.23:72.23\n5\t152131193\t315357:1\tT\t]5:152135135]T\t99\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TTGACAA;MAPQ=60;MATEID=315357:2;MATENM=3;NM=0;NUMPARTS=2;SCTG=c_5_152120501_152145501_9C;SPAN=3942;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:32:36:6.6:102.3,6.6,0:22:23:-102.8:102.8\n5\t152131457\t315358:1\tA\tA[5:152135133[\t92\tPASS\tDISC_MAPQ=60;EVDNC=TSI_L;HOMSEQ=CAA;MAPQ=60;MATEID=315358:2;MATENM=1;NM=1;NUMPARTS=3;REPSEQ=AA;SCTG=c_5_152120501_152145501_8C;SPAN=3676;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:28:30:8.4:92.4,8.4,0:24:9:-92.37:92.37\n5\t152131577\t315360:1\tC\tC[5:152139302[\t59\tPASS\tDISC_MAPQ=53;EVDNC=DSCRD;IMPRECISE;MAPQ=53;MATEID=315360:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:152131577(+)-5:152139302(-)__5_152120501_152145501D;SPAN=7725;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:20:13:5.4:59.4,5.4,0:0:20:-59.41:59.41\n5\t152135133\t315358:2\tC\t]5:152131457]C\t92\tPASS\tDISC_MAPQ=60;EVDNC=TSI_L;HOMSEQ=CAA;MAPQ=60;MATEID=315358:1;MATENM=1;NM=1;NUMPARTS=3;REPSEQ=AA;SCTG=c_5_152120501_152145501_8C;SPAN=3676;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:28:30:8.4:92.4,8.4,0:24:9:-92.37:92.37\n5\t152135135\t315357:2\tA\tA[5:152131193[\t99\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TTGACAA;MAPQ=60;MATEID=315357:1;MATENM=0;NM=3;NUMPARTS=2;SCTG=c_5_152120501_152145501_9C;SPAN=3942;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:32:36:6.6:102.3,6.6,0:22:23:-102.8:102.8\n5\t152135246\t315361:1\tT\tT[5:152139304[\t59\tPASS\tDISC_MAPQ=255;EVDNC=TSI_L;HOMSEQ=TCT;MAPQ=60;MATEID=315361:2;MATENM=4;NM=1;NUMPARTS=3;SCTG=c_5_152120501_152145501_8C;SPAN=4058;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:20:10:5.4:59.4,5.4,0:20:0:-59.41:59.41\n5\t152139302\t315360:2\tG\t]5:152131577]G\t59\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=315360:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:152131577(+)-5:152139302(-)__5_152120501_152145501D;SPAN=7725;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:20:13:5.4:59.4,5.4,0:0:20:-59.41:59.41\n5\t152139304\t315361:2\tT\t]5:152135246]T\t59\tPASS\tDISC_MAPQ=255;EVDNC=TSI_L;HOMSEQ=TCT;MAPQ=60;MATEID=315361:1;MATENM=1;NM=4;NUMPARTS=3;SCTG=c_5_152120501_152145501_8C;SPAN=4058;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:20:10:5.4:59.4,5.4,0:20:0:-59.41:59.41\n5\t155760325\t316002:1\tN\tN[5:155761324[\t49\tPASS\tDISC_MAPQ=59;EVDNC=ASDIS;HOMSEQ=AGCATCACCCTCTCCATCACCCTATTCATCATCCTCTCCATCATCCTCATCATCACTCTC;MAPQ=60;MATEID=316002:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_5_155746501_155771501_7C;SPAN=999;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:17:3:4.5:49.5,4.5,0:7:12:-49.51:49.51\n5\t155761324\t316002:2\tN\t]5:155760325]N\t49\tPASS\tDISC_MAPQ=45;EVDNC=ASDIS;HOMSEQ=AGCATCACCCTCTCCATCACCCTATTCATCATCCTCTCCATCATCCTCATCATCACTCTC;MAPQ=60;MATEID=316002:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_5_155746501_155771501_7C;SPAN=999;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:17:3:4.5:49.5,4.5,0:7:12:-49.51:49.51\n5\t161161852\t317139:1\tT\tT[5:161163317[\t39\tPASS\tDISC_MAPQ=59;EVDNC=DSCRD;IMPRECISE;MAPQ=59;MATEID=317139:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:161161852(+)-5:161163317(-)__5_161161001_161186001D;SPAN=1465;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:13:6:3.6:39.6,3.6,0:0:13:-39.61:39.61\n5\t161163317\t317139:2\tT\t]5:161161852]T\t39\tPASS\tDISC_MAPQ=50;EVDNC=DSCRD;IMPRECISE;MAPQ=50;MATEID=317139:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:161161852(+)-5:161163317(-)__5_161161001_161186001D;SPAN=1465;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:13:6:3.6:39.6,3.6,0:0:13:-39.61:39.61\n5\t167374629\t318555:1\tT\tT[5:167384020[\t29\tPASS\tEVDNC=ASSMB;HOMSEQ=T;MAPQ=60;MATEID=318555:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_5_167384001_167409001_4C;SPAN=9391;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:10:10:2.7:29.7,2.7,0:10:0:-29.71:29.71\n5\t167384020\t318555:2\tT\t]5:167374629]T\t29\tPASS\tEVDNC=ASSMB;HOMSEQ=T;MAPQ=60;MATEID=318555:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_5_167384001_167409001_4C;SPAN=9391;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:10:10:2.7:29.7,2.7,0:10:0:-29.71:29.71\n5\t169468974\t318970:2\tA\t]1:157699943]A\t28\tPASS\tEVDNC=ASSMB;HOMSEQ=A;MAPQ=60;MATEID=318970:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_5_169466501_169491501_22C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:15:8.9:28.7,0,8.9:10:0:-29.37:29.37\n5\t170833608\t321444:1\tG\t[5:178756116[G\t72\tPASS\tDISC_MAPQ=42;EVDNC=DSCRD;IMPRECISE;MAPQ=42;MATEID=321444:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:170833608(-)-5:178756116(-)__5_178752001_178777001D;SPAN=7922508;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:24:6:6.6:72.6,6.6,0:0:24:-72.62:72.62\n5\t172787216\t319739:1\tA\t]5:172787320]A\t68\tPASS\tEVDNC=ASSMB;HOMSEQ=AGAGACACACA;MAPQ=60;MATEID=319739:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_5_172774001_172799001_9C;SPAN=104;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:26:61:68.9:68.9,0,82.1:26:0:-68.68:68.78\n5\t172787320\t319739:2\tA\tA[5:172787216[\t68\tPASS\tEVDNC=ASSMB;HOMSEQ=AGAGACACACA;MAPQ=60;MATEID=319739:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_5_172774001_172799001_9C;SPAN=104;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:26:61:68.9:68.9,0,82.1:26:0:-68.68:68.78\n5\t173783944\t113403:1\tA\tA[7:44911156[\t30\tPASS\tDISC_MAPQ=255;EVDNC=TSI_L;HOMSEQ=AAAGAAA;MAPQ=60;MATEID=113403:2;MATENM=0;NM=0;NUMPARTS=3;REPSEQ=AAAGAAAGAAAG;SCTG=c_2_136293501_136318501_18C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:24:0:6.2:30.3,6.2,0:24:0:-30.37:30.37\n5\t176306387\t832137:1\tC\tC]18:57714588]\t82\tPASS\tDISC_MAPQ=8;EVDNC=ASDIS;HOMSEQ=C;MAPQ=60;MATEID=832137:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_18_57697501_57722501_10C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:27:10:7.5:82.5,7.5,0:27:7:-82.52:82.52\n5\t176306407\t832138:1\tA\t[18:57714342[A\t99\tPASS\tDISC_MAPQ=3;EVDNC=ASDIS;HOMSEQ=AG;MAPQ=60;MATEID=832138:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_18_57697501_57722501_6C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:42:15:11.7:128.7,11.7,0:25:23:-128.7:128.7\n5\t178095245\t321220:1\tC\tC[5:178096986[\t27\tPASS\tDISC_MAPQ=57;EVDNC=DSCRD;IMPRECISE;MAPQ=57;MATEID=321220:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:178095245(+)-5:178096986(-)__5_178090501_178115501D;SPAN=1741;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:44:27.2:27.2,0,83.3:0:12:-27.24:28.84\n5\t178096986\t321220:2\tT\t]5:178095245]T\t27\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=321220:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:178095245(+)-5:178096986(-)__5_178090501_178115501D;SPAN=1741;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:44:27.2:27.2,0,83.3:0:12:-27.24:28.84\n5\t178727280\t321428:1\tC\t[5:178866051[C\t22\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=321428:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:178727280(-)-5:178866051(-)__5_178703001_178728001D;SPAN=138771;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:13:9.5:22.7,0,9.5:0:8:-23.02:23.02\n5\t178756116\t321444:2\tT\t[5:170833608[T\t72\tPASS\tDISC_MAPQ=59;EVDNC=DSCRD;IMPRECISE;MAPQ=59;MATEID=321444:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:170833608(-)-5:178756116(-)__5_178752001_178777001D;SPAN=7922508;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:24:6:6.6:72.6,6.6,0:0:24:-72.62:72.62\n5\t178866051\t321428:2\tA\t[5:178727280[A\t22\tPASS\tDISC_MAPQ=49;EVDNC=DSCRD;IMPRECISE;MAPQ=49;MATEID=321428:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:178727280(-)-5:178866051(-)__5_178703001_178728001D;SPAN=138771;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:13:9.5:22.7,0,9.5:0:8:-23.02:23.02\n5\t179299294\t321578:1\tC\tC]9:112100475]\t42\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=GGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGC;MAPQ=60;MATEID=321578:2;MATENM=4;NM=9;NUMPARTS=2;SCTG=c_5_179291001_179316001_13C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:14:7:3.9:42.9,3.9,0:12:2:-42.91:42.91\n5\t180437137\t322042:1\tC\t]5:180437234]C\t72\tPASS\tEVDNC=ASSMB;HOMSEQ=CAGCCAATGGTCCAGCAGCACCAGCCCAGGGCAGCC;MAPQ=60;MATEID=322042:2;MATENM=2;NM=3;NUMPARTS=2;SCTG=c_5_180418001_180443001_13C;SPAN=97;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:26:49:49.1:72.2,0,49.1:26:0:-72.24:72.24\n5\t180437234\t322042:2\tC\tC[5:180437137[\t72\tPASS\tEVDNC=ASSMB;HOMSEQ=CAGCCAATGGTCCAGCAGCACCAGCCCAGGGCAGCC;MAPQ=60;MATEID=322042:1;MATENM=3;NM=2;NUMPARTS=2;SCTG=c_5_180418001_180443001_13C;SPAN=97;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:26:49:49.1:72.2,0,49.1:26:0:-72.24:72.24\n6\t150718\t322397:2\tT\tT[5:15864[\t99\tPASS\tDISC_MAPQ=5;EVDNC=TSI_L;HOMSEQ=CTT;MAPQ=60;MATEID=322397:1;MATENM=5;NM=6;NUMPARTS=3;REPSEQ=TTT;SCTG=c_6_147001_172001_17C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:39:30:10.8:118.8,10.8,0:32:13:-118.8:118.8\n6\t666488\t322633:1\tA\tA[6:667821[\t89\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=322633:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:666488(+)-6:667821(-)__6_661501_686501D;SPAN=1333;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:29:6:8.1:89.1,8.1,0:0:29:-89.12:89.12\n6\t667821\t322633:2\tT\t]6:666488]T\t89\tPASS\tDISC_MAPQ=54;EVDNC=DSCRD;IMPRECISE;MAPQ=54;MATEID=322633:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:666488(+)-6:667821(-)__6_661501_686501D;SPAN=1333;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:29:6:8.1:89.1,8.1,0:0:29:-89.12:89.12\n6\t773629\t322688:1\tT\tT[6:774803[\t99\tPASS\tEVDNC=ASSMB;HOMSEQ=CT;MAPQ=60;MATEID=322688:2;MATENM=2;NM=4;NUMPARTS=2;SCTG=c_6_759501_784501_14C;SPAN=1174;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:42:19:11.7:128.7,11.7,0:42:0:-128.7:128.7\n6\t774803\t322688:2\tC\t]6:773629]C\t99\tPASS\tEVDNC=ASSMB;HOMSEQ=CT;MAPQ=60;MATEID=322688:1;MATENM=4;NM=2;NUMPARTS=2;SCTG=c_6_759501_784501_14C;SPAN=1174;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:42:19:11.7:128.7,11.7,0:42:0:-128.7:128.7\n6\t857170\t322747:1\tC\tC[6:857563[\t79\tPASS\tEVDNC=ASSMB;HOMSEQ=C;MAPQ=60;MATEID=322747:2;MATENM=4;NM=8;NUMPARTS=2;SCTG=c_6_857501_882501_13C;SPAN=393;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:26:3:7.2:79.2,7.2,0:26:0:-79.22:79.22\n6\t857563\t322747:2\tC\t]6:857170]C\t79\tPASS\tEVDNC=ASSMB;HOMSEQ=C;MAPQ=60;MATEID=322747:1;MATENM=8;NM=4;NUMPARTS=2;SCTG=c_6_857501_882501_13C;SPAN=393;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:26:3:7.2:79.2,7.2,0:26:0:-79.22:79.22\n6\t994018\t322842:1\tT\t]6:994259]T\t53\tPASS\tEVDNC=ASSMB;HOMSEQ=TATGTATGTATGTATGTATGTATGTATGTAT;MAPQ=60;MATEID=322842:2;MATENM=6;NM=0;NUMPARTS=2;SCTG=c_6_980001_1005001_17C;SPAN=241;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:20:47:53:53,0,62.9:20:0:-52.81:52.88\n6\t994259\t322842:2\tT\tT[6:994018[\t53\tPASS\tEVDNC=ASSMB;HOMSEQ=TATGTATGTATGTATGTATGTATGTATGTAT;MAPQ=60;MATEID=322842:1;MATENM=0;NM=6;NUMPARTS=2;SCTG=c_6_980001_1005001_17C;SPAN=241;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:20:47:53:53,0,62.9:20:0:-52.81:52.88\n6\t1051554\t322871:1\tG\t]6:1051737]G\t57\tPASS\tEVDNC=ASSMB;INSERTION=AAT;MAPQ=60;MATEID=322871:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_1029001_1054001_3C;SPAN=183;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:23:67:57.2:57.2,0,110:23:0:-57.09:58.06\n6\t1051737\t322871:2\tT\tT[6:1051554[\t57\tPASS\tEVDNC=ASSMB;INSERTION=AAT;MAPQ=60;MATEID=322871:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_1029001_1054001_3C;SPAN=183;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:23:67:57.2:57.2,0,110:23:0:-57.09:58.06\n6\t3145215\t323598:1\tT\tT[6:3146275[\t35\tPASS\tDISC_MAPQ=59;EVDNC=ASDIS;HOMSEQ=GAGTGCTGGTTTGGGTCGAGTGCTGGTTCGGGTTGGAGTGCTGGTTCGGGTGGAGTGCTGATTCGGGGTGGAGTGCTGGT;MAPQ=60;MATEID=323598:2;MATENM=4;NM=4;NUMPARTS=2;SCTG=c_6_3136001_3161001_57C;SPAN=1060;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:15:2.3:35.3,0,2.3:2:12:-37.11:37.11\n6\t3146275\t323598:2\tG\t]6:3145215]G\t35\tPASS\tDISC_MAPQ=31;EVDNC=ASDIS;HOMSEQ=GAGTGCTGGTTTGGGTCGAGTGCTGGTTCGGGTTGGAGTGCTGGTTCGGGTGGAGTGCTGATTCGGGGTGGAGTGCTGGT;MAPQ=60;MATEID=323598:1;MATENM=4;NM=4;NUMPARTS=2;SCTG=c_6_3136001_3161001_57C;SPAN=1060;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:15:2.3:35.3,0,2.3:2:12:-37.11:37.11\n6\t3156553\t323610:1\tC\tC[6:3180181[\t22\tPASS\tDISC_MAPQ=40;EVDNC=DSCRD;IMPRECISE;MAPQ=40;MATEID=323610:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:3156553(+)-6:3180181(-)__6_3160501_3185501D;SPAN=23628;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:14:12.5:22.4,0,12.5:0:8:-22.62:22.62\n6\t3180181\t323610:2\tG\t]6:3156553]G\t22\tPASS\tDISC_MAPQ=58;EVDNC=DSCRD;IMPRECISE;MAPQ=58;MATEID=323610:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:3156553(+)-6:3180181(-)__6_3160501_3185501D;SPAN=23628;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:14:12.5:22.4,0,12.5:0:8:-22.62:22.62\n6\t4050023\t323982:1\tT\tT[6:4050327[\t60\tPASS\tEVDNC=ASSMB;HOMSEQ=GGAAACAGTTGTTTTT;MAPQ=60;MATEID=323982:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_4042501_4067501_93C;SPAN=304;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:21:31:14.6:60.8,0,14.6:21:0:-61.93:61.93\n6\t4050327\t323982:2\tG\t]6:4050023]G\t60\tPASS\tEVDNC=ASSMB;HOMSEQ=GGAAACAGTTGTTTTT;MAPQ=60;MATEID=323982:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_4042501_4067501_93C;SPAN=304;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:21:31:14.6:60.8,0,14.6:21:0:-61.93:61.93\n6\t5037015\t324390:1\tT\tT[6:5038953[\t82\tPASS\tEVDNC=ASSMB;INSERTION=AAAATCTGCTTC;MAPQ=60;MATEID=324390:2;MATENM=3;NM=2;NUMPARTS=2;SCTG=c_6_5022501_5047501_11C;SPAN=1938;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:27:16:7.5:82.5,7.5,0:27:0:-82.52:82.52\n6\t5038953\t324390:2\tA\t]6:5037015]A\t82\tPASS\tEVDNC=ASSMB;INSERTION=AAAATCTGCTTC;MAPQ=60;MATEID=324390:1;MATENM=2;NM=3;NUMPARTS=2;SCTG=c_6_5022501_5047501_11C;SPAN=1938;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:27:16:7.5:82.5,7.5,0:27:0:-82.52:82.52\n6\t5179525\t324454:1\tT\tT[6:5380194[\t21\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=324454:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:5179525(+)-6:5380194(-)__6_5169501_5194501D;SPAN=200669;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:17:18.5:21.8,0,18.5:0:8:-21.63:21.63\n6\t5380194\t324454:2\tG\t]6:5179525]G\t21\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=324454:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:5179525(+)-6:5380194(-)__6_5169501_5194501D;SPAN=200669;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:17:18.5:21.8,0,18.5:0:8:-21.63:21.63\n6\t5852479\t661746:1\tT\t[13:21325351[T\t26\tPASS\tDISC_MAPQ=36;EVDNC=DSCRD;IMPRECISE;MAPQ=36;MATEID=661746:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:5852479(-)-13:21325351(-)__13_21315001_21340001D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:9:8:2.4:26.4,2.4,0:0:9:-26.41:26.41\n6\t5853533\t661748:1\tA\tA]13:21325323]\t69\tPASS\tDISC_MAPQ=28;EVDNC=DSCRD;IMPRECISE;MAPQ=28;MATEID=661748:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:5853533(+)-13:21325323(+)__13_21315001_21340001D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:23:6:6.3:69.3,6.3,0:0:23:-69.32:69.32\n6\t5898216\t324659:1\tA\tA[6:5898643[\t63\tPASS\tEVDNC=ASSMB;HOMSEQ=CA;MAPQ=60;MATEID=324659:2;MATENM=1;NM=2;NUMPARTS=2;SCTG=c_6_5880001_5905001_75C;SPAN=427;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:22:33:17.3:63.5,0,17.3:22:0:-64.61:64.61\n6\t5898643\t324659:2\tC\t]6:5898216]C\t63\tPASS\tEVDNC=ASSMB;HOMSEQ=CA;MAPQ=60;MATEID=324659:1;MATENM=2;NM=1;NUMPARTS=2;SCTG=c_6_5880001_5905001_75C;SPAN=427;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:22:33:17.3:63.5,0,17.3:22:0:-64.61:64.61\n6\t6008564\t324826:1\tC\t]6:6149684]C\t30\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;MAPQ=60;MATEID=324826:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_6149501_6174501_31C;SPAN=141120;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:22:23.6:30.2,0,23.6:7:5:-30.15:30.15\n6\t6068616\t324764:1\tT\tT[6:6068946[\t0\tPASS\tEVDNC=ASSMB;HOMSEQ=CCCTCTTTTTCT;MAPQ=60;MATEID=324764:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_6051501_6076501_146C;SPAN=330;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/0:14:264:27.7:0,27.7,719.5:14:0:27.99:22.92\n6\t6068946\t324764:2\tC\t]6:6068616]C\t0\tPASS\tEVDNC=ASSMB;HOMSEQ=CCCTCTTTTTCT;MAPQ=60;MATEID=324764:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_6051501_6076501_146C;SPAN=330;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/0:14:264:27.7:0,27.7,719.5:14:0:27.99:22.92\n6\t6149684\t324826:2\tT\tT[6:6008564[\t30\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;MAPQ=60;MATEID=324826:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_6149501_6174501_31C;SPAN=141120;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:22:23.6:30.2,0,23.6:7:5:-30.15:30.15\n6\t8227706\t325594:1\tT\tT[6:8228009[\t40\tPASS\tEVDNC=ASSMB;HOMSEQ=TACTGTGAAGTTTTTT;MAPQ=60;MATEID=325594:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_8207501_8232501_120C;SPAN=303;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:22:13.7:40.1,0,13.7:14:0:-40.63:40.63\n6\t8228009\t325594:2\tT\t]6:8227706]T\t40\tPASS\tEVDNC=ASSMB;HOMSEQ=TACTGTGAAGTTTTTT;MAPQ=60;MATEID=325594:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_8207501_8232501_120C;SPAN=303;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:22:13.7:40.1,0,13.7:14:0:-40.63:40.63\n6\t9179635\t326114:1\tT\t]6:9180042]T\t31\tPASS\tEVDNC=ASSMB;HOMSEQ=TTCT;MAPQ=25;MATEID=326114:2;MATENM=1;NM=5;NUMPARTS=2;SCTG=c_6_9163001_9188001_16C;SPAN=407;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:42:31.1:31.1,0,74:13:0:-31.11:32.1\n6\t9180042\t326114:2\tT\tT[6:9179635[\t31\tPASS\tEVDNC=ASSMB;HOMSEQ=TTCT;MAPQ=60;MATEID=326114:1;MATENM=5;NM=1;NUMPARTS=2;SCTG=c_6_9163001_9188001_16C;SPAN=407;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:42:31.1:31.1,0,74:13:0:-31.11:32.1\n6\t9347213\t732153:1\tG\tG[15:55959268[\t10\tPASS\tEVDNC=ASSMB;HOMSEQ=TTAG;MAPQ=60;MATEID=732153:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_15_55958001_55983001_95C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:7:44:10.7:10.7,0,99.8:7:0:-10.74:14.97\n6\t9517473\t326244:1\tA\t]6:9517558]A\t50\tPASS\tEVDNC=ASSMB;INSERTION=TTATAT;MAPQ=60;MATEID=326244:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_6_9506001_9531001_35C;SPAN=85;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:23:89:50.9:50.9,0,173:23:0:-50.91:54.64\n6\t9517558\t326244:2\tA\tA[6:9517473[\t50\tPASS\tEVDNC=ASSMB;INSERTION=TTATAT;MAPQ=60;MATEID=326244:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_6_9506001_9531001_35C;SPAN=85;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:23:89:50.9:50.9,0,173:23:0:-50.91:54.64\n6\t13128170\t988636:1\tC\tC]Un_KN707756v1_decoy:4877]\t33\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=988636:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_607_1_4877_2C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:11:3:3:33,3,0:11:0:-33.01:33.01\n6\t13128174\t327574:1\tC\t]9:21841795]C\t49\tPASS\tDISC_MAPQ=60;EVDNC=TSI_L;HOMSEQ=ATCACATCACAGGACTCTTTGCAGACATCCCCCAGCATCAGCTCAGACAGAGCCTGTTGCCCTGCTGAGTGGCTAGACCCAGAAGAGCAATAACAGTCACTGCAGTCCAGGTCTCAAGAAGCCCCATCCCTAGGGGAAGGGGGAGAGCACAACATCAAGGGGTCACCCCTTGGGACAAGAAAATCTGAACAGCAGCCCTTGAGTTTCAAACTTCTC;INSERTION=ACTTCTC;MAPQ=60;MATEID=327574:2;MATENM=8;NM=0;NUMPARTS=4;REPSEQ=CTCT;SCTG=c_6_13107501_13132501_88C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:17:16:4.5:49.5,4.5,0:13:6:-49.51:49.51\n6\t13128174\t988637:1\tC\t[Un_KN707756v1_decoy:1[C\t36\tPASS\tDISC_MAPQ=255;EVDNC=TSI_L;MAPQ=60;MATEID=988637:2;MATENM=0;NM=0;NUMPARTS=5;SCTG=c_607_1_4877_0C;SPAN=-1;SUBN=1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:12:4:3.3:36.3,3.3,0:12:0:-36.31:36.31\n6\t13191316\t812584:1\tA\tA[17:66641155[\t40\tPASS\tDISC_MAPQ=59;EVDNC=DSCRD;IMPRECISE;MAPQ=59;MATEID=812584:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:13191316(+)-17:66641155(-)__17_66640001_66665001D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:15:34:40.1:40.1,0,43.4:0:15:-39.96:39.98\n6\t13434242\t327696:1\tC\t]6:13434601]C\t27\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=CACAGAAGTCAAGTGCAGGGCCTTATGGGAACACAGAAGTCAAGTGCAGGGC;MAPQ=60;MATEID=327696:2;MATENM=3;NM=0;NUMPARTS=2;SCTG=c_6_13426001_13451001_3C;SPAN=359;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:56:27.2:27.2,0,113:11:2:-27.17:30.18\n6\t13434601\t327696:2\tC\tC[6:13434242[\t27\tPASS\tDISC_MAPQ=37;EVDNC=ASDIS;HOMSEQ=CACAGAAGTCAAGTGCAGGGCCTTATGGGAACACAGAAGTCAAGTGCAGGGC;MAPQ=60;MATEID=327696:1;MATENM=0;NM=3;NUMPARTS=2;SCTG=c_6_13426001_13451001_3C;SPAN=359;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:56:27.2:27.2,0,113:11:2:-27.17:30.18\n6\t17099662\t328908:1\tA\t]6:17320764]A\t48\tPASS\tEVDNC=ASSMB;HOMSEQ=A;MAPQ=60;MATEID=328908:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_6_17076501_17101501_22C;SPAN=221102;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:17:26:15.8:48.8,0,15.8:17:0:-49.68:49.68\n6\t17320764\t328908:2\tA\tA[6:17099662[\t48\tPASS\tEVDNC=ASSMB;HOMSEQ=A;MAPQ=60;MATEID=328908:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_6_17076501_17101501_22C;SPAN=221102;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:17:26:15.8:48.8,0,15.8:17:0:-49.68:49.68\n6\t18401859\t329492:1\tC\tC[6:18402637[\t92\tPASS\tEVDNC=ASSMB;HOMSEQ=CCC;MAPQ=60;MATEID=329492:2;MATENM=3;NM=0;NUMPARTS=2;SCTG=c_6_18399501_18424501_13C;SPAN=778;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:31:14:8.4:92.4,8.4,0:31:0:-92.42:92.42\n6\t18402637\t329492:2\tC\t]6:18401859]C\t92\tPASS\tEVDNC=ASSMB;HOMSEQ=CCC;MAPQ=60;MATEID=329492:1;MATENM=0;NM=3;NUMPARTS=2;SCTG=c_6_18399501_18424501_13C;SPAN=778;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:31:14:8.4:92.4,8.4,0:31:0:-92.42:92.42\n6\t19423383\t329861:1\tT\tT[6:19423606[\t56\tPASS\tEVDNC=ASSMB;HOMSEQ=TGCATTGCCTTT;MAPQ=60;MATEID=329861:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_19404001_19429001_69C;SPAN=223;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:19:23:0.2:56.3,0,0.2:19:0:-59.38:59.38\n6\t19423606\t329861:2\tT\t]6:19423383]T\t56\tPASS\tEVDNC=ASSMB;HOMSEQ=TGCATTGCCTTT;MAPQ=60;MATEID=329861:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_19404001_19429001_69C;SPAN=223;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:19:23:0.2:56.3,0,0.2:19:0:-59.38:59.38\n6\t19764886\t330018:1\tA\t[14:76216190[A\t92\tPASS\tDISC_MAPQ=4;EVDNC=ASDIS;INSERTION=G;MAPQ=19;MATEID=330018:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_19747001_19772001_3C;SPAN=-1;SUBN=2;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:31:14:8.4:92.4,8.4,0:28:15:-92.42:92.42\n6\t19764894\t330019:1\tG\tG[6:19770954[\t0\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AGAAAAAAAAACTAACTGG;MAPQ=60;MATEID=330019:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_6_19747001_19772001_11C;SPAN=6060;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/0:30:887:99:0,150,2535:13:22:150.3:43.18\n6\t19770954\t330019:2\tA\t]6:19764894]A\t0\tPASS\tDISC_MAPQ=53;EVDNC=ASDIS;HOMSEQ=AGAAAAAAAAACTAACTGG;MAPQ=60;MATEID=330019:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_6_19747001_19772001_11C;SPAN=6060;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/0:30:887:99:0,150,2535:13:22:150.3:43.18\n6\t20765147\t330418:1\tT\tT[6:20765456[\t74\tPASS\tEVDNC=ASSMB;HOMSEQ=GGTTACATTCTT;MAPQ=60;MATEID=330418:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_20751501_20776501_118C;SPAN=309;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:25:30:1.4:74,0,1.4:25:0:-78.37:78.37\n6\t20765456\t330418:2\tG\t]6:20765147]G\t74\tPASS\tEVDNC=ASSMB;HOMSEQ=GGTTACATTCTT;MAPQ=60;MATEID=330418:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_20751501_20776501_118C;SPAN=309;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:25:30:1.4:74,0,1.4:25:0:-78.37:78.37\n6\t21205807\t330582:1\tA\tA[6:21206084[\t82\tPASS\tDISC_MAPQ=57;EVDNC=ASDIS;HOMSEQ=GCCTCCCAAAGTGCTGGGATTACA;MAPQ=60;MATEID=330582:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_21192501_21217501_51C;SPAN=277;SUBN=1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:27:23:7.5:82.5,7.5,0:22:8:-82.52:82.52\n6\t21206084\t330582:2\tG\t]6:21205807]G\t82\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=GCCTCCCAAAGTGCTGGGATTACA;MAPQ=60;MATEID=330582:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_21192501_21217501_51C;SPAN=277;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:27:23:7.5:82.5,7.5,0:22:8:-82.52:82.52\n6\t21456465\t330678:2\tA\tA[4:183247605[\t23\tPASS\tDISC_MAPQ=57;EVDNC=ASDIS;HOMSEQ=CTATATATACTATATATA;MAPQ=60;MATEID=330678:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_21437501_21462501_22C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:11:3.5:23.3,0,3.5:7:3:-24.05:24.05\n6\t22052541\t330896:1\tC\tC[6:22053499[\t79\tPASS\tEVDNC=ASSMB;HOMSEQ=C;MAPQ=60;MATEID=330896:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_22050001_22075001_4C;SPAN=958;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:26:30:1.8:79.2,1.8,0:26:0:-82.68:82.68\n6\t22053499\t330896:2\tC\t]6:22052541]C\t79\tPASS\tEVDNC=ASSMB;HOMSEQ=C;MAPQ=60;MATEID=330896:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_22050001_22075001_4C;SPAN=958;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:26:30:1.8:79.2,1.8,0:26:0:-82.68:82.68\n6\t22782439\t331166:1\tT\tT[6:22782745[\t82\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=CCAAGTTTGGCAATTATTT;MAPQ=60;MATEID=331166:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_22760501_22785501_46C;SPAN=306;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:26:29:4.8:82.5,4.8,0:17:10:-83.85:83.85\n6\t22782745\t331166:2\tC\t]6:22782439]C\t82\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=CCAAGTTTGGCAATTATTT;MAPQ=60;MATEID=331166:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_22760501_22785501_46C;SPAN=306;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:26:29:4.8:82.5,4.8,0:17:10:-83.85:83.85\n6\t22832898\t331189:1\tA\tA[6:22833431[\t8\tPASS\tEVDNC=ASSMB;INSERTION=CGCTCTAA;MAPQ=60;MATEID=331189:2;MATENM=1;NM=2;NUMPARTS=2;SCTG=c_6_22809501_22834501_21C;SPAN=533;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:6:39:8.9:8.9,0,88.1:6:0:-8.844:12.73\n6\t22833431\t331189:2\tC\t]6:22832898]C\t8\tPASS\tEVDNC=ASSMB;INSERTION=CGCTCTAA;MAPQ=60;MATEID=331189:1;MATENM=2;NM=1;NUMPARTS=2;SCTG=c_6_22809501_22834501_21C;SPAN=533;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:6:39:8.9:8.9,0,88.1:6:0:-8.844:12.73\n6\t23734339\t331626:1\tT\t]6:23758485]T\t29\tPASS\tDISC_MAPQ=34;EVDNC=DSCRD;IMPRECISE;MAPQ=34;MATEID=331626:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:23734339(-)-6:23758485(+)__6_23716001_23741001D;SPAN=24146;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:9:10:2.7:29.7,2.7,0:0:9:-29.08:29.08\n6\t23743031\t331638:1\tT\tT[6:23745718[\t62\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=331638:2;MATENM=5;NM=0;NUMPARTS=2;SCTG=c_6_23740501_23765501_45C;SPAN=2687;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:22:36:26.3:62.6,0,26.3:22:0:-63.21:63.21\n6\t23745718\t331638:2\tG\t]6:23743031]G\t62\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=331638:1;MATENM=0;NM=5;NUMPARTS=2;SCTG=c_6_23740501_23765501_45C;SPAN=2687;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:22:36:26.3:62.6,0,26.3:22:0:-63.21:63.21\n6\t23758485\t331626:2\tC\tC[6:23734339[\t29\tPASS\tDISC_MAPQ=15;EVDNC=DSCRD;IMPRECISE;MAPQ=15;MATEID=331626:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:23734339(-)-6:23758485(+)__6_23716001_23741001D;SPAN=24146;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:9:10:2.7:29.7,2.7,0:0:9:-29.08:29.08\n6\t24811736\t332224:1\tA\tA[6:24817721[\t79\tPASS\tDISC_MAPQ=54;EVDNC=DSCRD;IMPRECISE;MAPQ=54;MATEID=332224:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:24811736(+)-6:24817721(-)__6_24794001_24819001D;SPAN=5985;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:26:5:7.2:79.2,7.2,0:0:26:-79.22:79.22\n6\t24817721\t332224:2\tT\t]6:24811736]T\t79\tPASS\tDISC_MAPQ=57;EVDNC=DSCRD;IMPRECISE;MAPQ=57;MATEID=332224:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:24811736(+)-6:24817721(-)__6_24794001_24819001D;SPAN=5985;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:26:5:7.2:79.2,7.2,0:0:26:-79.22:79.22\n6\t26518278\t332830:1\tA\tA[6:26518585[\t4\tPASS\tEVDNC=ASSMB;HOMSEQ=GTGATCCACCCGCCTCGGCCTCCCAAA;MAPQ=60;MATEID=332830:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_6_26509001_26534001_11C;SPAN=307;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:4:30:4.7:4.7,0,70.7:4:0:-4.771:8.22\n6\t26518585\t332830:2\tG\t]6:26518278]G\t4\tPASS\tEVDNC=ASSMB;HOMSEQ=GTGATCCACCCGCCTCGGCCTCCCAAA;MAPQ=60;MATEID=332830:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_6_26509001_26534001_11C;SPAN=307;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:4:30:4.7:4.7,0,70.7:4:0:-4.771:8.22\n6\t29717817\t333640:1\tT\tT[6:29720303[\t0\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=333640:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:29717817(+)-6:29720303(-)__6_29718501_29743501D;SPAN=2486;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/0:35:473:17.1:0,17.1,1225:0:35:17.42:62.5\n6\t29720303\t333640:2\tA\t]6:29717817]A\t0\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=333640:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:29717817(+)-6:29720303(-)__6_29718501_29743501D;SPAN=2486;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/0:35:473:17.1:0,17.1,1225:0:35:17.42:62.5\n6\t29932114\t333714:1\tG\tG[6:29933749[\t99\tPASS\tDISC_MAPQ=48;EVDNC=DSCRD;IMPRECISE;MAPQ=48;MATEID=333714:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:29932114(+)-6:29933749(-)__6_29914501_29939501D;SPAN=1635;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:41:7:11.4:125.4,11.4,0:0:41:-125.4:125.4\n6\t29933749\t333714:2\tA\t]6:29932114]A\t99\tPASS\tDISC_MAPQ=56;EVDNC=DSCRD;IMPRECISE;MAPQ=56;MATEID=333714:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:29932114(+)-6:29933749(-)__6_29914501_29939501D;SPAN=1635;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:41:7:11.4:125.4,11.4,0:0:41:-125.4:125.4\n6\t31225585\t334297:1\tA\tA[6:31226615[\t26\tPASS\tDISC_MAPQ=53;EVDNC=DSCRD;IMPRECISE;MAPQ=53;MATEID=334297:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:31225585(+)-6:31226615(-)__6_31213001_31238001D;SPAN=1030;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:13:6.2:26,0,6.2:0:9:-26.69:26.69\n6\t31226615\t334297:2\tT\t]6:31225585]T\t26\tPASS\tDISC_MAPQ=28;EVDNC=DSCRD;IMPRECISE;MAPQ=28;MATEID=334297:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:31225585(+)-6:31226615(-)__6_31213001_31238001D;SPAN=1030;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:13:6.2:26,0,6.2:0:9:-26.69:26.69\n6\t31243972\t334323:1\tC\tC[6:31245339[\t99\tPASS\tDISC_MAPQ=58;EVDNC=DSCRD;IMPRECISE;MAPQ=58;MATEID=334323:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:31243972(+)-6:31245339(-)__6_31237501_31262501D;SPAN=1367;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:45:23:12.6:138.6,12.6,0:0:45:-138.6:138.6\n6\t31245339\t334323:2\tA\t]6:31243972]A\t99\tPASS\tDISC_MAPQ=54;EVDNC=DSCRD;IMPRECISE;MAPQ=54;MATEID=334323:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:31243972(+)-6:31245339(-)__6_31237501_31262501D;SPAN=1367;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:45:23:12.6:138.6,12.6,0:0:45:-138.6:138.6\n6\t31453847\t334588:1\tA\tA[6:31456609[\t54\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=334588:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:31453847(+)-6:31456609(-)__6_31433501_31458501D;SPAN=2762;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:19:29:18.2:54.5,0,18.2:0:19:-55.55:55.55\n6\t31456609\t334588:2\tC\t]6:31453847]C\t54\tPASS\tDISC_MAPQ=47;EVDNC=DSCRD;IMPRECISE;MAPQ=47;MATEID=334588:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:31453847(+)-6:31456609(-)__6_31433501_31458501D;SPAN=2762;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:19:29:18.2:54.5,0,18.2:0:19:-55.55:55.55\n6\t31703416\t334708:1\tG\tG[6:31706584[\t24\tPASS\tEVDNC=ASSMB;INSERTION=ACATTTTC;MAPQ=60;MATEID=334708:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_31703001_31728001_0C;SPAN=3168;SUBN=8;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:31:24.5:24.5,0,50.9:10:0:-24.3:24.91\n6\t31706584\t334708:2\tA\t]6:31703416]A\t24\tPASS\tEVDNC=ASSMB;INSERTION=ACATTTTC;MAPQ=60;MATEID=334708:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_31703001_31728001_0C;SPAN=3168;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:31:24.5:24.5,0,50.9:10:0:-24.3:24.91\n6\t32320801\t585625:1\tA\tA[11:40904857[\t39\tPASS\tEVDNC=ASSMB;INSERTION=G;MAPQ=60;MATEID=585625:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_40890501_40915501_5C;SPAN=-1;SUBN=4;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:12:13:3.6:39.6,3.6,0:12:0:-39.28:39.28\n6\t32594296\t335097:1\tA\tA[6:32596831[\t28\tPASS\tDISC_MAPQ=58;EVDNC=DSCRD;IMPRECISE;MAPQ=58;MATEID=335097:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:32594296(+)-6:32596831(-)__6_32585001_32610001D;SPAN=2535;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:17:11.9:28.4,0,11.9:0:10:-28.47:28.47\n6\t32596831\t335097:2\tT\t]6:32594296]T\t28\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=335097:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:32594296(+)-6:32596831(-)__6_32585001_32610001D;SPAN=2535;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:17:11.9:28.4,0,11.9:0:10:-28.47:28.47\n6\t33062526\t4064:2\tC\t]1:13299454]C\t46\tPASS\tDISC_MAPQ=60;EVDNC=TSI_L;MAPQ=60;MATEID=4064:1;MATENM=1;NM=11;NUMPARTS=3;REPSEQ=GG;SCTG=c_1_13279001_13304001_4C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:16:12:4.2:46.2,4.2,0:13:5:-46.21:46.21\n6\t33615534\t335682:1\tC\tC[6:33618067[\t62\tPASS\tDISC_MAPQ=58;EVDNC=DSCRD;IMPRECISE;MAPQ=58;MATEID=335682:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:33615534(+)-6:33618067(-)__6_33614001_33639001D;SPAN=2533;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:21:13:5.7:62.7,5.7,0:0:21:-62.72:62.72\n6\t33618067\t335682:2\tC\t]6:33615534]C\t62\tPASS\tDISC_MAPQ=57;EVDNC=DSCRD;IMPRECISE;MAPQ=57;MATEID=335682:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:33615534(+)-6:33618067(-)__6_33614001_33639001D;SPAN=2533;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:21:13:5.7:62.7,5.7,0:0:21:-62.72:62.72\n6\t33970052\t335774:1\tA\tA[6:33974921[\t25\tPASS\tEVDNC=ASSMB;INSERTION=GCTTTTAT;MAPQ=60;MATEID=335774:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_33957001_33982001_67C;SPAN=4869;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:28:25.1:25.1,0,44.9:10:0:-25.14:25.46\n6\t33974921\t335774:2\tA\t]6:33970052]A\t25\tPASS\tEVDNC=ASSMB;INSERTION=GCTTTTAT;MAPQ=60;MATEID=335774:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_33957001_33982001_67C;SPAN=4869;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:28:25.1:25.1,0,44.9:10:0:-25.14:25.46\n6\t34072502\t335835:1\tA\t]6:34073328]A\t45\tPASS\tDISC_MAPQ=41;EVDNC=DSCRD;IMPRECISE;MAPQ=41;MATEID=335835:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:34072502(-)-6:34073328(+)__6_34055001_34080001D;SPAN=826;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:18:51:45.2:45.2,0,81.5:0:18:-45.08:45.71\n6\t34073328\t335835:2\tC\tC[6:34072502[\t45\tPASS\tDISC_MAPQ=44;EVDNC=DSCRD;IMPRECISE;MAPQ=44;MATEID=335835:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:34072502(-)-6:34073328(+)__6_34055001_34080001D;SPAN=826;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:18:51:45.2:45.2,0,81.5:0:18:-45.08:45.71\n6\t34375168\t336028:1\tC\t]6:34536382]C\t42\tPASS\tDISC_MAPQ=53;EVDNC=ASDIS;HOMSEQ=C;MAPQ=5;MATEID=336028:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_34520501_34545501_48C;SPAN=161214;SUBN=4;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:14:14:3.9:42.9,3.9,0:8:8:-42.91:42.91\n6\t34536382\t336028:2\tC\tC[6:34375168[\t42\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=C;MAPQ=60;MATEID=336028:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_34520501_34545501_48C;SPAN=161214;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:14:14:3.9:42.9,3.9,0:8:8:-42.91:42.91\n6\t34829944\t336095:1\tA\t]6:34915313]A\t32\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=336095:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:34829944(-)-6:34915313(+)__6_34912501_34937501D;SPAN=85369;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:16:5.6:32,0,5.6:0:11:-32.57:32.57\n6\t34915313\t336095:2\tC\tC[6:34829944[\t32\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=336095:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:34829944(-)-6:34915313(+)__6_34912501_34937501D;SPAN=85369;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:16:5.6:32,0,5.6:0:11:-32.57:32.57\n6\t35658747\t336247:1\tT\tT[6:35661967[\t99\tPASS\tDISC_MAPQ=58;EVDNC=DSCRD;IMPRECISE;MAPQ=58;MATEID=336247:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:35658747(+)-6:35661967(-)__6_35647501_35672501D;SPAN=3220;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:35:10:9.6:105.6,9.6,0:0:35:-105.6:105.6\n6\t35661967\t336247:2\tG\t]6:35658747]G\t99\tPASS\tDISC_MAPQ=59;EVDNC=DSCRD;IMPRECISE;MAPQ=59;MATEID=336247:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:35658747(+)-6:35661967(-)__6_35647501_35672501D;SPAN=3220;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:35:10:9.6:105.6,9.6,0:0:35:-105.6:105.6\n6\t35915816\t255192:2\tC\tC]4:133589882]\t22\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=255192:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=4:133589882(+)-6:35915816(+)__4_133574001_133599001D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:15:15.5:22.1,0,15.5:0:8:-22.25:22.25\n6\t39096799\t337395:1\tA\tA[6:39097098[\t69\tPASS\tEVDNC=ASSMB;INSERTION=TTGTTGTTG;MAPQ=60;MATEID=337395:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_39077501_39102501_40C;SPAN=299;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:23:22:6.3:69.3,6.3,0:23:0:-69.32:69.32\n6\t39097098\t337395:2\tA\t]6:39096799]A\t69\tPASS\tEVDNC=ASSMB;INSERTION=TTGTTGTTG;MAPQ=60;MATEID=337395:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_39077501_39102501_40C;SPAN=299;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:23:22:6.3:69.3,6.3,0:23:0:-69.32:69.32\n6\t41219155\t337856:1\tT\t]6:41219297]T\t61\tPASS\tEVDNC=ASSMB;HOMSEQ=TGCGTATATACGAAATGTACATATATGTGCGTATATA;MAPQ=60;MATEID=337856:2;MATENM=5;NM=3;NUMPARTS=2;SCTG=c_6_41209001_41234001_28C;SPAN=142;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:27:99:61.4:61.4,0,186.8:27:0:-61.3:64.89\n6\t41219297\t337856:2\tA\tA[6:41219155[\t61\tPASS\tEVDNC=ASSMB;HOMSEQ=TGCGTATATACGAAATGTACATATATGTGCGTATATA;MAPQ=60;MATEID=337856:1;MATENM=3;NM=5;NUMPARTS=2;SCTG=c_6_41209001_41234001_28C;SPAN=142;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:27:99:61.4:61.4,0,186.8:27:0:-61.3:64.89\n6\t41436338\t337911:1\tT\tT[6:41436646[\t40\tPASS\tEVDNC=ASSMB;HOMSEQ=TATGCTTGAAATTTCT;MAPQ=60;MATEID=337911:2;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_6_41429501_41454501_18C;SPAN=308;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:20:7.7:40.7,0,7.7:14:0:-41.65:41.65\n6\t41436646\t337911:2\tT\t]6:41436338]T\t40\tPASS\tEVDNC=ASSMB;HOMSEQ=TATGCTTGAAATTTCT;MAPQ=60;MATEID=337911:1;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_6_41429501_41454501_18C;SPAN=308;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:20:7.7:40.7,0,7.7:14:0:-41.65:41.65\n6\t41897072\t338045:1\tT\tT[6:41897594[\t52\tPASS\tDISC_MAPQ=58;EVDNC=ASDIS;HOMSEQ=CCTGTAATCCCAGCTACTCGGGAAGCTGAGGCAGGAGAAT;MAPQ=60;MATEID=338045:2;MATENM=1;NM=2;NUMPARTS=2;SCTG=c_6_41895001_41920001_15C;SPAN=522;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:18:11:4.8:52.8,4.8,0:12:11:-52.81:52.81\n6\t41897594\t338045:2\tC\t]6:41897072]C\t52\tPASS\tDISC_MAPQ=56;EVDNC=ASDIS;HOMSEQ=CCTGTAATCCCAGCTACTCGGGAAGCTGAGGCAGGAGAAT;MAPQ=60;MATEID=338045:1;MATENM=2;NM=1;NUMPARTS=2;SCTG=c_6_41895001_41920001_15C;SPAN=522;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:18:11:4.8:52.8,4.8,0:12:11:-52.81:52.81\n6\t44044615\t338787:1\tT\t]6:44045375]T\t31\tPASS\tDISC_MAPQ=19;EVDNC=DSCRD;IMPRECISE;MAPQ=19;MATEID=338787:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:44044615(-)-6:44045375(+)__6_44026501_44051501D;SPAN=760;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:21:137:31.1:31.1,0,311.6:0:21:-30.81:44.53\n6\t44045375\t338787:2\tA\tA[6:44044615[\t31\tPASS\tDISC_MAPQ=28;EVDNC=DSCRD;IMPRECISE;MAPQ=28;MATEID=338787:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:44044615(-)-6:44045375(+)__6_44026501_44051501D;SPAN=760;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:21:137:31.1:31.1,0,311.6:0:21:-30.81:44.53\n6\t47167028\t339768:1\tT\tT[6:47167380[\t20\tPASS\tEVDNC=ASSMB;INSERTION=TTTA;MAPQ=60;MATEID=339768:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_47162501_47187501_44C;SPAN=352;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:21:20.6:20.6,0,30.5:8:0:-20.51:20.65\n6\t47167380\t339768:2\tT\t]6:47167028]T\t20\tPASS\tEVDNC=ASSMB;INSERTION=TTTA;MAPQ=60;MATEID=339768:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_47162501_47187501_44C;SPAN=352;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:21:20.6:20.6,0,30.5:8:0:-20.51:20.65\n6\t48963309\t340391:1\tC\tC[6:48970897[\t31\tPASS\tEVDNC=ASSMB;HOMSEQ=C;MAPQ=60;MATEID=340391:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_6_48951001_48976001_80C;SPAN=7588;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:29:31.4:31.4,0,41.3:12:0:-31.46:31.54\n6\t48970897\t340391:2\tC\t]6:48963309]C\t31\tPASS\tEVDNC=ASSMB;HOMSEQ=C;MAPQ=60;MATEID=340391:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_6_48951001_48976001_80C;SPAN=7588;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:29:31.4:31.4,0,41.3:12:0:-31.46:31.54\n6\t51133723\t341121:1\tT\t[6:51227147[T\t52\tPASS\tDISC_MAPQ=58;EVDNC=ASDIS;HOMSEQ=TTTGATTGCACT;MAPQ=60;MATEID=341121:2;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_6_51205001_51230001_33C;SPAN=93424;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:18:18:4.8:52.8,4.8,0:12:7:-52.81:52.81\n6\t51227147\t341121:2\tA\t[6:51133723[A\t52\tPASS\tDISC_MAPQ=47;EVDNC=ASDIS;HOMSEQ=TTTGATTGCACT;MAPQ=32;MATEID=341121:1;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_6_51205001_51230001_33C;SPAN=93424;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:18:18:4.8:52.8,4.8,0:12:7:-52.81:52.81\n6\t51379339\t289697:2\tG\tG[5:43063268[\t23\tPASS\tDISC_MAPQ=0;EVDNC=TSI_L;HOMSEQ=AAAGAAAG;INSERTION=GAA;MAPQ=60;MATEID=289697:1;MATENM=6;NM=0;NUMPARTS=3;REPSEQ=AAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGG;SCTG=c_5_43046501_43071501_75C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:19:8:4.8:23.4,4.8,0:8:11:-23.48:23.48\n6\t51391502\t341184:1\tC\tC[6:51391805[\t32\tPASS\tEVDNC=ASSMB;HOMSEQ=AAAATTAAGGTGTC;MAPQ=60;MATEID=341184:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_6_51376501_51401501_45C;SPAN=303;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:15:5.6:32,0,5.6:11:0:-33.15:33.15\n6\t51391805\t341184:2\tA\t]6:51391502]A\t32\tPASS\tEVDNC=ASSMB;HOMSEQ=AAAATTAAGGTGTC;MAPQ=60;MATEID=341184:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_6_51376501_51401501_45C;SPAN=303;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:15:5.6:32,0,5.6:11:0:-33.15:33.15\n6\t51652566\t341267:1\tT\tT[6:51652878[\t30\tPASS\tEVDNC=ASSMB;HOMSEQ=TATCTCTCTTGTTTT;MAPQ=60;MATEID=341267:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_51646001_51671001_28C;SPAN=312;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:44:30.5:30.5,0,80:13:0:-30.55:31.78\n6\t51652878\t341267:2\tT\t]6:51652566]T\t30\tPASS\tEVDNC=ASSMB;HOMSEQ=TATCTCTCTTGTTTT;MAPQ=60;MATEID=341267:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_51646001_51671001_28C;SPAN=312;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:44:30.5:30.5,0,80:13:0:-30.55:31.78\n6\t52786107\t341621:1\tC\t]6:52826679]C\t39\tPASS\tDISC_MAPQ=49;EVDNC=DSCRD;IMPRECISE;MAPQ=49;MATEID=341621:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:52786107(-)-6:52826679(+)__6_52822001_52847001D;SPAN=40572;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:13:5:3.6:39.6,3.6,0:0:13:-39.61:39.61\n6\t52786421\t341602:1\tA\tA[6:52787846[\t39\tPASS\tDISC_MAPQ=42;EVDNC=DSCRD;IMPRECISE;MAPQ=42;MATEID=341602:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:52786421(+)-6:52787846(-)__6_52773001_52798001D;SPAN=1425;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:15:35:39.8:39.8,0,46.4:0:15:-39.68:39.73\n6\t52787846\t341602:2\tA\t]6:52786421]A\t39\tPASS\tDISC_MAPQ=32;EVDNC=DSCRD;IMPRECISE;MAPQ=32;MATEID=341602:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:52786421(+)-6:52787846(-)__6_52773001_52798001D;SPAN=1425;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:15:35:39.8:39.8,0,46.4:0:15:-39.68:39.73\n6\t52787876\t341603:1\tA\t]6:52826658]A\t99\tPASS\tDISC_MAPQ=32;EVDNC=TSI_L;INSERTION=CAGTTGTATGTCCCTTTTACCAGTCATTGGGAATTCCCAAGTCTGTGATCTTGCCAAACGTAAATTCGCAATAATTGTGTGTTGATTACTTGTCTAGAGAACGTAACTTTAGCATAAACACCTACCTTTCCTCTGGCAATGATCATATTCTTAGATTAAGTAAAATGACATCATGACTATTATTTCCCCTCATGAC;MAPQ=46;MATEID=341603:2;MATENM=1;NM=8;NUMPARTS=3;REPSEQ=TT;SCTG=c_6_52773001_52798001_77C;SPAN=38782;SUBN=7;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:41:22:11.4:125.4,11.4,0:38:4:-125.4:125.4\n6\t52826658\t341603:2\tC\tC[6:52787876[\t99\tPASS\tDISC_MAPQ=46;EVDNC=TSI_L;INSERTION=CAGTTGTATGTCCCTTTTACCAGTCATTGGGAATTCCCAAGTCTGTGATCTTGCCAAACGTAAATTCGCAATAATTGTGTGTTGATTACTTGTCTAGAGAACGTAACTTTAGCATAAACACCTACCTTTCCTCTGGCAATGATCATATTCTTAGATTAAGTAAAATGACATCATGACTATTATTTCCCCTCATGAC;MAPQ=60;MATEID=341603:1;MATENM=8;NM=1;NUMPARTS=3;REPSEQ=TT;SCTG=c_6_52773001_52798001_77C;SPAN=38782;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:41:22:11.4:125.4,11.4,0:38:4:-125.4:125.4\n6\t52826679\t341621:2\tA\tA[6:52786107[\t39\tPASS\tDISC_MAPQ=59;EVDNC=DSCRD;IMPRECISE;MAPQ=59;MATEID=341621:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:52786107(-)-6:52826679(+)__6_52822001_52847001D;SPAN=40572;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:13:5:3.6:39.6,3.6,0:0:13:-39.61:39.61\n6\t53345529\t341823:1\tT\t]6:53345659]T\t59\tPASS\tEVDNC=ASSMB;INSERTION=ATTCA;MAPQ=60;MATEID=341823:2;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_6_53336501_53361501_10C;SPAN=130;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:22:48:59.3:59.3,0,59.3:22:0:-59.13:59.13\n6\t53345659\t341823:2\tA\tA[6:53345529[\t59\tPASS\tEVDNC=ASSMB;INSERTION=ATTCA;MAPQ=60;MATEID=341823:1;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_6_53336501_53361501_10C;SPAN=130;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:22:48:59.3:59.3,0,59.3:22:0:-59.13:59.13\n6\t54059860\t342044:1\tT\t]6:54063911]T\t41\tPASS\tEVDNC=ASSMB;INSERTION=AG;MAPQ=60;MATEID=342044:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_6_54047001_54072001_38C;SPAN=4051;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:15:29:31.4:41.3,0,31.4:15:0:-41.43:41.43\n6\t54060007\t342045:1\tT\tT[6:54070031[\t64\tPASS\tEVDNC=ASSMB;HOMSEQ=GT;MAPQ=60;MATEID=342045:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_6_54047001_54072001_5C;SPAN=10024;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:23:42:41:64.1,0,41:23:0:-64.37:64.37\n6\t54063911\t342044:2\tT\tT[6:54059860[\t41\tPASS\tEVDNC=ASSMB;INSERTION=AG;MAPQ=60;MATEID=342044:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_6_54047001_54072001_38C;SPAN=4051;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:15:29:31.4:41.3,0,31.4:15:0:-41.43:41.43\n6\t54070031\t342045:2\tG\t]6:54060007]G\t64\tPASS\tEVDNC=ASSMB;HOMSEQ=GT;MAPQ=60;MATEID=342045:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_6_54047001_54072001_5C;SPAN=10024;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:23:42:41:64.1,0,41:23:0:-64.37:64.37\n6\t54691651\t342258:1\tA\tA[6:54691973[\t92\tPASS\tEVDNC=ASSMB;HOMSEQ=AAAAGAATGTCCCA;MAPQ=60;MATEID=342258:2;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_6_54684001_54709001_67C;SPAN=322;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:30:30:8.4:92.4,8.4,0:30:0:-92.42:92.42\n6\t54691973\t342258:2\tA\t]6:54691651]A\t92\tPASS\tEVDNC=ASSMB;HOMSEQ=AAAAGAATGTCCCA;MAPQ=60;MATEID=342258:1;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_6_54684001_54709001_67C;SPAN=322;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:30:30:8.4:92.4,8.4,0:30:0:-92.42:92.42\n6\t58433243\t343345:1\tG\tG[6:61307772[\t89\tPASS\tEVDNC=ASSMB;HOMSEQ=TTCAGACAAAAAGTAGAAAGAAG;MAPQ=60;MATEID=343345:2;MATENM=1;NM=8;NUMPARTS=2;SCTG=c_6_58432501_58457501_60C;SPAN=2874529;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:27:29:8.1:89.1,8.1,0:27:0:-88.89:88.89\n6\t61027338\t344228:1\tC\t[6:61137183[C\t23\tPASS\tDISC_MAPQ=18;EVDNC=DSCRD;IMPRECISE;MAPQ=18;MATEID=344228:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:61027338(-)-6:61137183(-)__6_61127501_61152501D;SPAN=109845;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:8:7:2.1:23.1,2.1,0:0:8:-23.11:23.11\n6\t61048724\t344203:1\tT\t[6:61096462[T\t46\tPASS\tDISC_MAPQ=23;EVDNC=DSCRD;IMPRECISE;MAPQ=23;MATEID=344203:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:61048724(-)-6:61096462(-)__6_61078501_61103501D;SPAN=47738;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:14:16:4.2:46.2,4.2,0:0:14:-44.69:44.69\n6\t61096462\t344203:2\tT\t[6:61048724[T\t46\tPASS\tDISC_MAPQ=21;EVDNC=DSCRD;IMPRECISE;MAPQ=21;MATEID=344203:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:61048724(-)-6:61096462(-)__6_61078501_61103501D;SPAN=47738;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:14:16:4.2:46.2,4.2,0:0:14:-44.69:44.69\n6\t61137183\t344228:2\tC\t[6:61027338[C\t23\tPASS\tDISC_MAPQ=18;EVDNC=DSCRD;IMPRECISE;MAPQ=18;MATEID=344228:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:61027338(-)-6:61137183(-)__6_61127501_61152501D;SPAN=109845;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:8:7:2.1:23.1,2.1,0:0:8:-23.11:23.11\n6\t61307772\t343345:2\tT\t]6:58433243]T\t89\tPASS\tEVDNC=ASSMB;HOMSEQ=TTCAGACAAAAAGTAGAAAGAAG;MAPQ=60;MATEID=343345:1;MATENM=8;NM=1;NUMPARTS=2;SCTG=c_6_58432501_58457501_60C;SPAN=2874529;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:27:29:8.1:89.1,8.1,0:27:0:-88.89:88.89\n6\t61386959\t344524:1\tT\t]6:61388471]T\t14\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=344524:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:61386959(-)-6:61388471(+)__6_61372501_61397501D;SPAN=1512;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:41:14.9:14.9,0,87.5:0:8:-14.88:17.89\n6\t61388471\t344524:2\tT\tT[6:61386959[\t14\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=344524:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:61386959(-)-6:61388471(+)__6_61372501_61397501D;SPAN=1512;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:41:14.9:14.9,0,87.5:0:8:-14.88:17.89\n6\t61392871\t344529:1\tT\tT[6:61396289[\t38\tPASS\tDISC_MAPQ=59;EVDNC=ASDIS;HOMSEQ=TTGATAGAGCAGTTTTGAAACACTCTTTTTGT;MAPQ=60;MATEID=344529:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_61372501_61397501_122C;SPAN=3418;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:27:28.7:38.6,0,28.7:8:8:-38.69:38.69\n6\t61396289\t344529:2\tT\t]6:61392871]T\t38\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TTGATAGAGCAGTTTTGAAACACTCTTTTTGT;MAPQ=60;MATEID=344529:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_61372501_61397501_122C;SPAN=3418;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:27:28.7:38.6,0,28.7:8:8:-38.69:38.69\n6\t61411159\t344683:1\tC\tC[6:61420481[\t20\tPASS\tDISC_MAPQ=52;EVDNC=DSCRD;IMPRECISE;MAPQ=52;MATEID=344683:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:61411159(+)-6:61420481(-)__6_61397001_61422001D;SPAN=9322;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:23:20:20,0,36.5:0:8:-19.94:20.25\n6\t61420481\t344683:2\tG\t]6:61411159]G\t20\tPASS\tDISC_MAPQ=58;EVDNC=DSCRD;IMPRECISE;MAPQ=58;MATEID=344683:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:61411159(+)-6:61420481(-)__6_61397001_61422001D;SPAN=9322;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:23:20:20,0,36.5:0:8:-19.94:20.25\n6\t63957118\t345607:1\tA\tA[6:63958454[\t11\tPASS\tEVDNC=ASSMB;HOMSEQ=TGAA;MAPQ=60;MATEID=345607:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_63945001_63970001_71C;SPAN=1336;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:6:29:11.6:11.6,0,61.1:6:0:-11.65:13.59\n6\t63958454\t345607:2\tT\t]6:63957118]T\t11\tPASS\tEVDNC=ASSMB;HOMSEQ=TGAA;MAPQ=60;MATEID=345607:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_63945001_63970001_71C;SPAN=1336;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:6:29:11.6:11.6,0,61.1:6:0:-11.65:13.59\n6\t64312984\t345733:1\tG\t]6:64313296]G\t25\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=GATCA;MAPQ=60;MATEID=345733:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_64312501_64337501_31C;SPAN=312;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:38:25.7:25.7,0,68.6:11:2:-25.63:26.77\n6\t64313296\t345733:2\tA\tA[6:64312984[\t25\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=GATCA;MAPQ=60;MATEID=345733:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_64312501_64337501_31C;SPAN=312;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:38:25.7:25.7,0,68.6:11:2:-25.63:26.77\n6\t64475269\t345800:1\tA\tA[6:64475574[\t25\tPASS\tEVDNC=ASSMB;HOMSEQ=GAAAAGAAAA;MAPQ=60;MATEID=345800:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_64459501_64484501_10C;SPAN=305;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:16:12.2:25.4,0,12.2:9:0:-25.35:25.35\n6\t64475574\t345800:2\tG\t]6:64475269]G\t25\tPASS\tEVDNC=ASSMB;HOMSEQ=GAAAAGAAAA;MAPQ=60;MATEID=345800:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_64459501_64484501_10C;SPAN=305;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:16:12.2:25.4,0,12.2:9:0:-25.35:25.35\n6\t65550146\t346163:1\tT\tT[6:65552129[\t30\tPASS\tEVDNC=ASSMB;HOMSEQ=TACTATATCTTT;MAPQ=60;MATEID=346163:2;MATENM=2;NM=1;NUMPARTS=2;SCTG=c_6_65537501_65562501_69C;SPAN=1983;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:32:30.8:30.8,0,47.3:12:0:-30.62:30.87\n6\t65552129\t346163:2\tT\t]6:65550146]T\t30\tPASS\tEVDNC=ASSMB;HOMSEQ=TACTATATCTTT;MAPQ=60;MATEID=346163:1;MATENM=1;NM=2;NUMPARTS=2;SCTG=c_6_65537501_65562501_69C;SPAN=1983;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:32:30.8:30.8,0,47.3:12:0:-30.62:30.87\n6\t65564962\t346167:1\tA\tA[6:65565273[\t90\tPASS\tEVDNC=ASSMB;HOMSEQ=AAAAAGTGGGTGAA;MAPQ=60;MATEID=346167:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_65562001_65587001_80C;SPAN=311;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:33:66:74:90.5,0,74:33:0:-90.45:90.45\n6\t65565273\t346167:2\tA\t]6:65564962]A\t90\tPASS\tEVDNC=ASSMB;HOMSEQ=AAAAAGTGGGTGAA;MAPQ=60;MATEID=346167:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_65562001_65587001_80C;SPAN=311;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:33:66:74:90.5,0,74:33:0:-90.45:90.45\n6\t66298837\t346482:1\tT\tT[6:66339024[\t33\tPASS\tEVDNC=ASSMB;HOMSEQ=CT;MAPQ=60;MATEID=346482:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_66321501_66346501_25C;SPAN=40187;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:11:13:0.3:33,0.3,0:11:0:-34.67:34.67\n6\t66331014\t346487:1\tT\tT[6:66333296[\t26\tPASS\tDISC_MAPQ=54;EVDNC=DSCRD;IMPRECISE;MAPQ=54;MATEID=346487:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:66331014(+)-6:66333296(-)__6_66321501_66346501D;SPAN=2282;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:9:3:2.4:26.4,2.4,0:0:9:-26.41:26.41\n6\t66333296\t346487:2\tG\t]6:66331014]G\t26\tPASS\tDISC_MAPQ=55;EVDNC=DSCRD;IMPRECISE;MAPQ=55;MATEID=346487:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:66331014(+)-6:66333296(-)__6_66321501_66346501D;SPAN=2282;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:9:3:2.4:26.4,2.4,0:0:9:-26.41:26.41\n6\t66339024\t346482:2\tC\t]6:66298837]C\t33\tPASS\tEVDNC=ASSMB;HOMSEQ=CT;MAPQ=60;MATEID=346482:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_66321501_66346501_25C;SPAN=40187;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:11:13:0.3:33,0.3,0:11:0:-34.67:34.67\n6\t66782594\t346626:1\tA\t[6:66782833[A\t20\tPASS\tDISC_MAPQ=55;EVDNC=TSI_L;HOMSEQ=TATATATAATATCATATATATACACAAAT;MAPQ=60;MATEID=346626:2;MATENM=0;NM=3;NUMPARTS=3;REPSEQ=TATATATA;SCTG=c_6_66762501_66787501_2C;SPAN=239;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:22:8:20,0,8:13:10:-20.11:20.11\n6\t66782833\t346626:2\tT\t[6:66782594[T\t20\tPASS\tDISC_MAPQ=60;EVDNC=TSI_L;HOMSEQ=TATATATAATATCATATATATACACAAAT;MAPQ=60;MATEID=346626:1;MATENM=3;NM=0;NUMPARTS=3;REPSEQ=TATATATA;SCTG=c_6_66762501_66787501_2C;SPAN=239;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:22:8:20,0,8:13:10:-20.11:20.11\n6\t68894805\t347539:1\tA\t]6:68897984]A\t34\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=A;MAPQ=60;MATEID=347539:2;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_6_68894001_68919001_76C;SPAN=3179;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:30:34.4:34.4,0,41:9:6:-34.48:34.51\n6\t68897984\t347539:2\tA\tA[6:68894805[\t34\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=A;MAPQ=60;MATEID=347539:1;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_6_68894001_68919001_76C;SPAN=3179;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:30:34.4:34.4,0,41:9:6:-34.48:34.51\n6\t69480862\t347749:1\tC\tC[6:69482377[\t22\tPASS\tDISC_MAPQ=57;EVDNC=DSCRD;IMPRECISE;MAPQ=57;MATEID=347749:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:69480862(+)-6:69482377(-)__6_69482001_69507001D;SPAN=1515;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:13:9.5:22.7,0,9.5:0:8:-23.02:23.02\n6\t69482377\t347749:2\tT\t]6:69480862]T\t22\tPASS\tDISC_MAPQ=35;EVDNC=DSCRD;IMPRECISE;MAPQ=35;MATEID=347749:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:69480862(+)-6:69482377(-)__6_69482001_69507001D;SPAN=1515;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:13:9.5:22.7,0,9.5:0:8:-23.02:23.02\n6\t69542531\t347773:2\tA\tA[4:70133000[\t20\tPASS\tEVDNC=ASSMB;HOMSEQ=ATCCCA;MAPQ=60;MATEID=347773:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_69531001_69556001_105C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:7:10:3.8:20.3,0,3.8:7:0:-20.82:20.82\n6\t69542551\t347771:2\tG\t]4:70132919]G\t29\tPASS\tEVDNC=ASSMB;HOMSEQ=GCT;MAPQ=60;MATEID=347771:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_69531001_69556001_22C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:13:2.9:29.3,0,2.9:10:0:-30.55:30.55\n6\t70153588\t423222:1\tT\t]7:120983381]T\t29\tPASS\tDISC_MAPQ=41;EVDNC=DSCRD;IMPRECISE;MAPQ=41;MATEID=423222:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:70153588(-)-7:120983381(+)__7_120981001_121006001D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:10:7:2.7:29.7,2.7,0:0:10:-29.71:29.71\n6\t71198460\t348415:1\tA\t]6:71198552]A\t61\tPASS\tEVDNC=ASSMB;HOMSEQ=AAA;MAPQ=60;MATEID=348415:2;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_6_71197001_71222001_76C;SPAN=92;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:22:39:35.3:61.7,0,35.3:22:0:-62:62\n6\t71198552\t348415:2\tA\tA[6:71198460[\t61\tPASS\tEVDNC=ASSMB;HOMSEQ=AAA;MAPQ=60;MATEID=348415:1;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_6_71197001_71222001_76C;SPAN=92;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:22:39:35.3:61.7,0,35.3:22:0:-62:62\n6\t71861739\t348671:1\tT\tT[6:71862047[\t34\tPASS\tEVDNC=ASSMB;HOMSEQ=TTAAGGTGTGTTTT;MAPQ=60;MATEID=348671:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_71858501_71883501_62C;SPAN=308;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:18:8.3:34.7,0,8.3:12:0:-35.24:35.24\n6\t71862047\t348671:2\tT\t]6:71861739]T\t34\tPASS\tEVDNC=ASSMB;HOMSEQ=TTAAGGTGTGTTTT;MAPQ=60;MATEID=348671:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_71858501_71883501_62C;SPAN=308;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:18:8.3:34.7,0,8.3:12:0:-35.24:35.24\n6\t73446443\t349111:1\tG\tG[6:73446755[\t59\tPASS\tEVDNC=ASSMB;HOMSEQ=AAAAAAAAAAATCG;MAPQ=60;MATEID=349111:2;MATENM=3;NM=0;NUMPARTS=2;SCTG=c_6_73426501_73451501_5C;SPAN=312;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:20:15:5.4:59.4,5.4,0:20:0:-59.41:59.41\n6\t73446755\t349111:2\tA\t]6:73446443]A\t59\tPASS\tEVDNC=ASSMB;HOMSEQ=AAAAAAAAAAATCG;MAPQ=60;MATEID=349111:1;MATENM=0;NM=3;NUMPARTS=2;SCTG=c_6_73426501_73451501_5C;SPAN=312;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:20:15:5.4:59.4,5.4,0:20:0:-59.41:59.41\n6\t73882346\t349295:1\tT\tT[6:73892724[\t62\tPASS\tEVDNC=ASSMB;HOMSEQ=TT;MAPQ=60;MATEID=349295:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_73892001_73917001_127C;SPAN=10378;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:21:11:5.7:62.7,5.7,0:21:0:-62.72:62.72\n6\t73892724\t349295:2\tT\t]6:73882346]T\t62\tPASS\tEVDNC=ASSMB;HOMSEQ=TT;MAPQ=60;MATEID=349295:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_73892001_73917001_127C;SPAN=10378;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:21:11:5.7:62.7,5.7,0:21:0:-62.72:62.72\n6\t74122788\t349391:1\tG\tG[6:74123744[\t21\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=G;MAPQ=60;MATEID=349391:2;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_6_74112501_74137501_60C;SPAN=956;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:18:21.5:21.5,0,21.5:6:3:-21.35:21.36\n6\t74123744\t349391:2\tG\t]6:74122788]G\t21\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=G;MAPQ=60;MATEID=349391:1;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_6_74112501_74137501_60C;SPAN=956;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:18:21.5:21.5,0,21.5:6:3:-21.35:21.36\n6\t74155824\t349406:1\tT\tT[6:74156868[\t66\tPASS\tDISC_MAPQ=57;EVDNC=DSCRD;IMPRECISE;MAPQ=57;MATEID=349406:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:74155824(+)-6:74156868(-)__6_74137001_74162001D;SPAN=1044;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:22:9:6:66,6,0:0:22:-66.02:66.02\n6\t74156868\t349406:2\tG\t]6:74155824]G\t66\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=349406:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:74155824(+)-6:74156868(-)__6_74137001_74162001D;SPAN=1044;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:22:9:6:66,6,0:0:22:-66.02:66.02\n6\t75321511\t349695:1\tT\t[18:68905257[T\t49\tPASS\tDISC_MAPQ=5;EVDNC=ASDIS;HOMSEQ=TC;MAPQ=18;MATEID=349695:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_6_75313001_75338001_23C;SPAN=-1;SUBN=2;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:16:17:4.5:49.5,4.5,0:14:3:-49.51:49.51\n6\t75610907\t349808:1\tG\t]6:75610995]G\t50\tPASS\tEVDNC=ASSMB;HOMSEQ=GA;MAPQ=60;MATEID=349808:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_75607001_75632001_52C;SPAN=88;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:18:34:33.5:50,0,33.5:18:0:-49.98:49.98\n6\t75610995\t349808:2\tA\tA[6:75610907[\t50\tPASS\tEVDNC=ASSMB;HOMSEQ=GA;MAPQ=60;MATEID=349808:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_75607001_75632001_52C;SPAN=88;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:18:34:33.5:50,0,33.5:18:0:-49.98:49.98\n6\t75678281\t349877:1\tA\t]6:75770245]A\t59\tPASS\tEVDNC=ASSMB;HOMSEQ=AGG;MAPQ=60;MATEID=349877:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_75754001_75779001_49C;SPAN=91964;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:20:19:5.4:59.4,5.4,0:20:0:-59.41:59.41\n6\t75770245\t349877:2\tG\tG[6:75678281[\t59\tPASS\tEVDNC=ASSMB;HOMSEQ=AGG;MAPQ=60;MATEID=349877:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_75754001_75779001_49C;SPAN=91964;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:20:19:5.4:59.4,5.4,0:20:0:-59.41:59.41\n6\t76727539\t350204:1\tC\tC[6:76749271[\t20\tPASS\tDISC_MAPQ=50;EVDNC=ASDIS;HOMSEQ=TGTGTGGGAGTCTAAGTCTCTTTGTAGGTC;MAPQ=46;MATEID=350204:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_6_76734001_76759001_21C;SPAN=21732;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:7:10:3.8:20.3,0,3.8:2:6:-20.82:20.82\n6\t76749271\t350204:2\tT\t]6:76727539]T\t20\tPASS\tDISC_MAPQ=34;EVDNC=ASDIS;HOMSEQ=TGTGTGGGAGTCTAAGTCTCTTTGTAGGTC;MAPQ=46;MATEID=350204:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_6_76734001_76759001_21C;SPAN=21732;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:7:10:3.8:20.3,0,3.8:2:6:-20.82:20.82\n6\t77210403\t350343:1\tT\tT[6:77210694[\t62\tPASS\tEVDNC=ASSMB;HOMSEQ=AAAAATGCTACTGATTTTTGT;MAPQ=60;MATEID=350343:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_77199501_77224501_75C;SPAN=291;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:21:19:5.7:62.7,5.7,0:21:0:-62.72:62.72\n6\t77210694\t350343:2\tA\t]6:77210403]A\t62\tPASS\tEVDNC=ASSMB;HOMSEQ=AAAAATGCTACTGATTTTTGT;MAPQ=60;MATEID=350343:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_77199501_77224501_75C;SPAN=291;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:21:19:5.7:62.7,5.7,0:21:0:-62.72:62.72\n6\t77939704\t350614:2\tT\t[3:110032910[T\t47\tPASS\tDISC_MAPQ=57;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=350614:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_6_77934501_77959501_20C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:16:20:1.1:47.3,0,1.1:8:9:-49.48:49.48\n6\t78257477\t350715:1\tT\tT[6:78326759[\t46\tPASS\tEVDNC=ASSMB;INSERTION=GTCACCCAGTCTGGAGTGCTGT;MAPQ=60;MATEID=350715:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_6_78326501_78351501_1C;SPAN=69282;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:16:3:4.2:46.2,4.2,0:16:0:-46.21:46.21\n6\t78326759\t350715:2\tG\t]6:78257477]G\t46\tPASS\tEVDNC=ASSMB;INSERTION=GTCACCCAGTCTGGAGTGCTGT;MAPQ=60;MATEID=350715:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_6_78326501_78351501_1C;SPAN=69282;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:16:3:4.2:46.2,4.2,0:16:0:-46.21:46.21\n6\t79361711\t350977:1\tA\tA[6:79363612[\t36\tPASS\tDISC_MAPQ=24;EVDNC=DSCRD;IMPRECISE;MAPQ=24;MATEID=350977:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:79361711(+)-6:79363612(-)__6_79355501_79380501D;SPAN=1901;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:34:36.8:36.8,0,46.7:0:14:-36.66:36.75\n6\t79361925\t350980:1\tG\t]6:79363969]G\t46\tPASS\tDISC_MAPQ=36;EVDNC=DSCRD;IMPRECISE;MAPQ=36;MATEID=350980:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:79361925(-)-6:79363969(+)__6_79355501_79380501D;SPAN=2044;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:16:16:4.2:46.2,4.2,0:0:16:-46.21:46.21\n6\t79363612\t350977:2\tT\t]6:79361711]T\t36\tPASS\tDISC_MAPQ=40;EVDNC=DSCRD;IMPRECISE;MAPQ=40;MATEID=350977:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:79361711(+)-6:79363612(-)__6_79355501_79380501D;SPAN=1901;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:34:36.8:36.8,0,46.7:0:14:-36.66:36.75\n6\t79363969\t350980:2\tC\tC[6:79361925[\t46\tPASS\tDISC_MAPQ=48;EVDNC=DSCRD;IMPRECISE;MAPQ=48;MATEID=350980:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:79361925(-)-6:79363969(+)__6_79355501_79380501D;SPAN=2044;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:16:16:4.2:46.2,4.2,0:0:16:-46.21:46.21\n6\t81434730\t351633:1\tA\tA[6:81469346[\t26\tPASS\tDISC_MAPQ=46;EVDNC=DSCRD;IMPRECISE;MAPQ=46;MATEID=351633:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:81434730(+)-6:81469346(-)__6_81462501_81487501D;SPAN=34616;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:13:6.2:26,0,6.2:0:9:-26.69:26.69\n6\t81435065\t351618:1\tG\t]6:81469570]G\t29\tPASS\tDISC_MAPQ=19;EVDNC=DSCRD;IMPRECISE;MAPQ=19;MATEID=351618:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:81435065(-)-6:81469570(+)__6_81413501_81438501D;SPAN=34505;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:9:10:2.7:29.7,2.7,0:0:9:-29.08:29.08\n6\t81469346\t351633:2\tG\t]6:81434730]G\t26\tPASS\tDISC_MAPQ=20;EVDNC=DSCRD;IMPRECISE;MAPQ=20;MATEID=351633:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:81434730(+)-6:81469346(-)__6_81462501_81487501D;SPAN=34616;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:13:6.2:26,0,6.2:0:9:-26.69:26.69\n6\t81469570\t351618:2\tA\tA[6:81435065[\t29\tPASS\tDISC_MAPQ=20;EVDNC=DSCRD;IMPRECISE;MAPQ=20;MATEID=351618:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:81435065(-)-6:81469570(+)__6_81413501_81438501D;SPAN=34505;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:9:10:2.7:29.7,2.7,0:0:9:-29.08:29.08\n6\t82966367\t352039:1\tA\tA[6:82966669[\t11\tPASS\tEVDNC=ASSMB;HOMSEQ=AAAAACCACTGA;MAPQ=60;MATEID=352039:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_82957001_82982001_48C;SPAN=302;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:5:19:11.3:11.3,0,34.4:5:0:-11.16:11.92\n6\t82966669\t352039:2\tA\t]6:82966367]A\t11\tPASS\tEVDNC=ASSMB;HOMSEQ=AAAAACCACTGA;MAPQ=60;MATEID=352039:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_82957001_82982001_48C;SPAN=302;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:5:19:11.3:11.3,0,34.4:5:0:-11.16:11.92\n6\t84608433\t352428:1\tT\tT[6:84614503[\t89\tPASS\tEVDNC=ASSMB;HOMSEQ=AGAAATGT;MAPQ=60;MATEID=352428:2;MATENM=3;NM=2;NUMPARTS=2;SCTG=c_6_84598501_84623501_36C;SPAN=6070;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:29:22:8.1:89.1,8.1,0:29:0:-89.12:89.12\n6\t84614503\t352428:2\tA\t]6:84608433]A\t89\tPASS\tEVDNC=ASSMB;HOMSEQ=AGAAATGT;MAPQ=60;MATEID=352428:1;MATENM=2;NM=3;NUMPARTS=2;SCTG=c_6_84598501_84623501_36C;SPAN=6070;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:29:22:8.1:89.1,8.1,0:29:0:-89.12:89.12\n6\t85316647\t352651:1\tC\tC[6:85316950[\t75\tPASS\tEVDNC=ASSMB;HOMSEQ=AAGGGTGGGTCCC;MAPQ=60;MATEID=352651:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_6_85309001_85334001_16C;SPAN=303;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:25:15:6.9:75.9,6.9,0:25:0:-75.92:75.92\n6\t85316950\t352651:2\tA\t]6:85316647]A\t75\tPASS\tEVDNC=ASSMB;HOMSEQ=AAGGGTGGGTCCC;MAPQ=60;MATEID=352651:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_6_85309001_85334001_16C;SPAN=303;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:25:15:6.9:75.9,6.9,0:25:0:-75.92:75.92\n6\t85434593\t352692:1\tC\tC[6:85434915[\t43\tPASS\tEVDNC=ASSMB;HOMSEQ=GAAATTGCAGGCC;MAPQ=60;MATEID=352692:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_6_85431501_85456501_27C;SPAN=322;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:15:21:7.4:43.7,0,7.4:15:0:-44.87:44.87\n6\t85434915\t352692:2\tG\t]6:85434593]G\t43\tPASS\tEVDNC=ASSMB;HOMSEQ=GAAATTGCAGGCC;MAPQ=60;MATEID=352692:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_6_85431501_85456501_27C;SPAN=322;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:15:21:7.4:43.7,0,7.4:15:0:-44.87:44.87\n6\t85914115\t352816:1\tC\tC[6:85916115[\t23\tPASS\tEVDNC=ASSMB;INSERTION=CATGGGG;MAPQ=60;MATEID=352816:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_85897001_85922001_1C;SPAN=2000;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:23:23.3:23.3,0,33.2:9:0:-23.24:23.37\n6\t85916115\t352816:2\tG\t]6:85914115]G\t23\tPASS\tEVDNC=ASSMB;INSERTION=CATGGGG;MAPQ=60;MATEID=352816:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_85897001_85922001_1C;SPAN=2000;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:23:23.3:23.3,0,33.2:9:0:-23.24:23.37\n6\t85999056\t352839:1\tT\tT[6:86005120[\t46\tPASS\tDISC_MAPQ=54;EVDNC=DSCRD;IMPRECISE;MAPQ=54;MATEID=352839:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:85999056(+)-6:86005120(-)__6_85995001_86020001D;SPAN=6064;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:15:3:4.2:46.2,4.2,0:0:15:-46.21:46.21\n6\t86005120\t352839:2\tT\t]6:85999056]T\t46\tPASS\tDISC_MAPQ=28;EVDNC=DSCRD;IMPRECISE;MAPQ=28;MATEID=352839:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:85999056(+)-6:86005120(-)__6_85995001_86020001D;SPAN=6064;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:15:3:4.2:46.2,4.2,0:0:15:-46.21:46.21\n6\t87514975\t353351:1\tA\tA[6:87625111[\t40\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=353351:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_87612001_87637001_4C;SPAN=110136;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:21:10.7:40.4,0,10.7:14:0:-41.11:41.11\n6\t87603225\t353460:1\tG\t]6:87844554]G\t26\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=GC;MAPQ=60;MATEID=353460:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_6_87832501_87857501_128C;SPAN=241329;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:9:8:2.4:26.4,2.4,0:7:3:-26.41:26.41\n6\t87625111\t353351:2\tT\t]6:87514975]T\t40\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=353351:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_87612001_87637001_4C;SPAN=110136;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:21:10.7:40.4,0,10.7:14:0:-41.11:41.11\n6\t87844554\t353460:2\tC\tC[6:87603225[\t26\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=GC;MAPQ=60;MATEID=353460:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_6_87832501_87857501_128C;SPAN=241329;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:9:8:2.4:26.4,2.4,0:7:3:-26.41:26.41\n6\t92996975\t354864:1\tG\t]6:93033903]G\t46\tPASS\tDISC_MAPQ=58;EVDNC=DSCRD;IMPRECISE;MAPQ=58;MATEID=354864:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:92996975(-)-6:93033903(+)__6_93026501_93051501D;SPAN=36928;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:16:16:4.2:46.2,4.2,0:0:16:-46.21:46.21\n6\t93033903\t354864:2\tT\tT[6:92996975[\t46\tPASS\tDISC_MAPQ=17;EVDNC=DSCRD;IMPRECISE;MAPQ=17;MATEID=354864:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:92996975(-)-6:93033903(+)__6_93026501_93051501D;SPAN=36928;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:16:16:4.2:46.2,4.2,0:0:16:-46.21:46.21\n6\t94031356\t355198:1\tT\tT]6:94031699]\t46\tPASS\tEVDNC=ASSMB;INSERTION=G;MAPQ=60;MATEID=355198:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_94006501_94031501_12C;SPAN=343;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:16:12:4.2:46.2,4.2,0:16:0:-46.21:46.21\n6\t94031356\t355209:1\tT\tT[Un_KN707748v1_decoy:1[\t99\tPASS\tDISC_MAPQ=255;EVDNC=TSI_G;INSERTION=GGAGTTCCAATACATCTGGCAGCAGACTTTTCAGTGGAAATCTTACAGGCCGAGAGAGTGGCATGACATATTTAAAGTGCTGAAGGAAAAAACAAAAAACAAAAAACAAAAAACTTTTATCCTAGAATGGTATATCTGGTGAAAATAACCTTCAAGAGTGAGGGAGAAATAAAGACTTTCCTATACAAACAAACTGAGGGATTTCATCAATACTAGACCTGTCTTACACAAATGGTCAAGGGTACTCTGCAATCTGAAGGAAAAAGTATGTTAATGAGCAACAAAAAGTCAGCTGAAGGTACAAAATTCACTGGTAATAGCACACAGAAAAACACAGAATATTATAACAA;MAPQ=60;MATEID=355209:2;MATENM=1;NM=0;NUMPARTS=3;SCTG=c_6_94031001_94056001_14C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:47:12:12.9:141.9,12.9,0:47:0:-141.9:141.9\n6\t94031699\t355198:2\tC\tC]6:94031356]\t46\tPASS\tEVDNC=ASSMB;INSERTION=G;MAPQ=60;MATEID=355198:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_94006501_94031501_12C;SPAN=343;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:16:12:4.2:46.2,4.2,0:16:0:-46.21:46.21\n6\t94103373\t355239:2\tA\t[1:53954647[A\t49\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AATA;MAPQ=60;MATEID=355239:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_94080001_94105001_4C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:16:17:4.5:49.5,4.5,0:10:12:-49.51:49.51\n6\t94483606\t355385:1\tA\tA[6:94484619[\t95\tPASS\tEVDNC=ASSMB;HOMSEQ=TA;MAPQ=60;MATEID=355385:2;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_6_94472001_94497001_0C;SPAN=1013;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:32:17:8.7:95.7,8.7,0:32:0:-95.72:95.72\n6\t94484619\t355385:2\tT\t]6:94483606]T\t95\tPASS\tEVDNC=ASSMB;HOMSEQ=TA;MAPQ=60;MATEID=355385:1;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_6_94472001_94497001_0C;SPAN=1013;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:32:17:8.7:95.7,8.7,0:32:0:-95.72:95.72\n6\t94949156\t355480:1\tT\tT[6:94949479[\t69\tPASS\tEVDNC=ASSMB;HOMSEQ=AACAACAATGT;MAPQ=60;MATEID=355480:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_6_94937501_94962501_19C;SPAN=323;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:21:23:6.3:69.3,6.3,0:21:0:-68.32:68.32\n6\t94949479\t355480:2\tA\t]6:94949156]A\t69\tPASS\tEVDNC=ASSMB;HOMSEQ=AACAACAATGT;MAPQ=60;MATEID=355480:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_6_94937501_94962501_19C;SPAN=323;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:21:23:6.3:69.3,6.3,0:21:0:-68.32:68.32\n6\t95104597\t355551:1\tG\t]6:95122065]G\t28\tPASS\tEVDNC=ASSMB;HOMSEQ=GA;MAPQ=60;MATEID=355551:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_95109001_95134001_93C;SPAN=17468;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:16:8.9:28.7,0,8.9:10:0:-28.89:28.89\n6\t95122065\t355551:2\tA\tA[6:95104597[\t28\tPASS\tEVDNC=ASSMB;HOMSEQ=GA;MAPQ=60;MATEID=355551:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_95109001_95134001_93C;SPAN=17468;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:16:8.9:28.7,0,8.9:10:0:-28.89:28.89\n6\t95251293\t355670:1\tT\tT[6:95252916[\t52\tPASS\tDISC_MAPQ=53;EVDNC=DSCRD;IMPRECISE;MAPQ=53;MATEID=355670:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:95251293(+)-6:95252916(-)__6_95231501_95256501D;SPAN=1623;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:18:16:4.8:52.8,4.8,0:0:18:-52.81:52.81\n6\t95252916\t355670:2\tA\t]6:95251293]A\t52\tPASS\tDISC_MAPQ=48;EVDNC=DSCRD;IMPRECISE;MAPQ=48;MATEID=355670:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:95251293(+)-6:95252916(-)__6_95231501_95256501D;SPAN=1623;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:18:16:4.8:52.8,4.8,0:0:18:-52.81:52.81\n6\t95303196\t355697:1\tT\tT[6:95303500[\t44\tPASS\tEVDNC=ASSMB;HOMSEQ=TCCCAAATCTTTTT;MAPQ=60;MATEID=355697:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_95280501_95305501_59C;SPAN=304;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:15:19:1.4:44.3,0,1.4:15:0:-46.2:46.2\n6\t95303500\t355697:2\tT\t]6:95303196]T\t44\tPASS\tEVDNC=ASSMB;HOMSEQ=TCCCAAATCTTTTT;MAPQ=60;MATEID=355697:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_95280501_95305501_59C;SPAN=304;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:15:19:1.4:44.3,0,1.4:15:0:-46.2:46.2\n6\t97039514\t356253:1\tT\tT[6:97039732[\t24\tPASS\tEVDNC=ASSMB;INSERTION=ACAATAG;MAPQ=60;MATEID=356253:2;MATENM=5;NM=0;NUMPARTS=2;SCTG=c_6_97020001_97045001_20C;SPAN=218;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:20:24.2:24.2,0,24.2:9:0:-24.09:24.09\n6\t97039732\t356253:2\tA\t]6:97039514]A\t24\tPASS\tEVDNC=ASSMB;INSERTION=ACAATAG;MAPQ=60;MATEID=356253:1;MATENM=0;NM=5;NUMPARTS=2;SCTG=c_6_97020001_97045001_20C;SPAN=218;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:20:24.2:24.2,0,24.2:9:0:-24.09:24.09\n6\t99586625\t356965:1\tA\tA[6:99587446[\t46\tPASS\tEVDNC=ASSMB;INSERTION=ATTGC;MAPQ=60;MATEID=356965:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_99568001_99593001_107C;SPAN=821;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:14:15:4.2:46.2,4.2,0:14:0:-46.19:46.19\n6\t99587446\t356965:2\tT\t]6:99586625]T\t46\tPASS\tEVDNC=ASSMB;INSERTION=ATTGC;MAPQ=60;MATEID=356965:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_99568001_99593001_107C;SPAN=821;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:14:15:4.2:46.2,4.2,0:14:0:-46.19:46.19\n6\t101046817\t357372:1\tC\tC[6:101048733[\t47\tPASS\tDISC_MAPQ=58;EVDNC=DSCRD;IMPRECISE;MAPQ=58;MATEID=357372:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:101046817(+)-6:101048733(-)__6_101038001_101063001D;SPAN=1916;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:16:20:1.1:47.3,0,1.1:0:16:-49.48:49.48\n6\t101048733\t357372:2\tG\t]6:101046817]G\t47\tPASS\tDISC_MAPQ=51;EVDNC=DSCRD;IMPRECISE;MAPQ=51;MATEID=357372:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:101046817(+)-6:101048733(-)__6_101038001_101063001D;SPAN=1916;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:16:20:1.1:47.3,0,1.1:0:16:-49.48:49.48\n6\t101065929\t357378:2\tG\t[4:63062069[G\t69\tPASS\tDISC_MAPQ=23;EVDNC=ASDIS;INSERTION=TACAAACTCACTGGGAGGAA;MAPQ=57;MATEID=357378:1;MATENM=1;NM=4;NUMPARTS=2;SCTG=c_6_101062501_101087501_4C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:23:15:6.3:69.3,6.3,0:22:3:-69.32:69.32\n6\t102367247\t357846:1\tT\tT[6:102367939[\t41\tPASS\tEVDNC=ASSMB;INSERTION=TTA;MAPQ=60;MATEID=357846:2;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_6_102361001_102386001_92C;SPAN=692;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:15:30:34.4:41,0,34.4:15:0:-41.11:41.11\n6\t102367939\t357846:2\tC\t]6:102367247]C\t41\tPASS\tEVDNC=ASSMB;INSERTION=TTA;MAPQ=60;MATEID=357846:1;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_6_102361001_102386001_92C;SPAN=692;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:15:30:34.4:41,0,34.4:15:0:-41.11:41.11\n6\t103289589\t358187:1\tT\tT[6:103315015[\t52\tPASS\tEVDNC=ASSMB;INSERTION=GCCA;MAPQ=60;MATEID=358187:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_103292001_103317001_15C;SPAN=25426;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:18:8:4.8:52.8,4.8,0:18:0:-52.81:52.81\n6\t103315015\t358187:2\tA\t]6:103289589]A\t52\tPASS\tEVDNC=ASSMB;INSERTION=GCCA;MAPQ=60;MATEID=358187:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_103292001_103317001_15C;SPAN=25426;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:18:8:4.8:52.8,4.8,0:18:0:-52.81:52.81\n6\t104812953\t358589:1\tC\tC[6:104815883[\t52\tPASS\tEVDNC=ASSMB;HOMSEQ=GC;MAPQ=60;MATEID=358589:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_6_104811001_104836001_23C;SPAN=2930;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:18:18:4.8:52.8,4.8,0:18:0:-52.81:52.81\n6\t104815883\t358589:2\tG\t]6:104812953]G\t52\tPASS\tEVDNC=ASSMB;HOMSEQ=GC;MAPQ=60;MATEID=358589:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_6_104811001_104836001_23C;SPAN=2930;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:18:18:4.8:52.8,4.8,0:18:0:-52.81:52.81\n6\t105050281\t358669:1\tG\tG[6:105051158[\t28\tPASS\tDISC_MAPQ=20;EVDNC=DSCRD;IMPRECISE;MAPQ=20;MATEID=358669:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:105050281(+)-6:105051158(-)__6_105031501_105056501D;SPAN=877;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:15:8.9:28.7,0,8.9:0:10:-29.37:29.37\n6\t105051158\t358669:2\tG\t]6:105050281]G\t28\tPASS\tDISC_MAPQ=49;EVDNC=DSCRD;IMPRECISE;MAPQ=49;MATEID=358669:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:105050281(+)-6:105051158(-)__6_105031501_105056501D;SPAN=877;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:15:8.9:28.7,0,8.9:0:10:-29.37:29.37\n6\t105456034\t358766:1\tT\t]6:105555892]T\t16\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TGA;MAPQ=60;MATEID=358766:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_105448001_105473001_3C;SPAN=99858;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:6:11:10.1:16.7,0,10.1:3:4:-16.78:16.78\n6\t105555892\t358766:2\tA\tA[6:105456034[\t16\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TGA;MAPQ=60;MATEID=358766:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_105448001_105473001_3C;SPAN=99858;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:6:11:10.1:16.7,0,10.1:3:4:-16.78:16.78\n6\t106535761\t359076:1\tT\tT[6:106536067[\t99\tPASS\tEVDNC=ASSMB;HOMSEQ=AGCCACTAACTTTT;MAPQ=60;MATEID=359076:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_106526001_106551001_145C;SPAN=306;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:38:24:10.5:115.5,10.5,0:38:0:-115.5:115.5\n6\t106536067\t359076:2\tA\t]6:106535761]A\t99\tPASS\tEVDNC=ASSMB;HOMSEQ=AGCCACTAACTTTT;MAPQ=60;MATEID=359076:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_106526001_106551001_145C;SPAN=306;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:38:24:10.5:115.5,10.5,0:38:0:-115.5:115.5\n6\t107710138\t359522:1\tT\tT[6:107711199[\t14\tPASS\tEVDNC=ASSMB;INSERTION=TCCTCCCACTCACTCC;MAPQ=60;MATEID=359522:2;MATENM=2;NM=1;NUMPARTS=2;SCTG=c_6_107702001_107727001_125C;SPAN=1061;SUBN=3;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:6:19:14.6:14.6,0,31.1:6:0:-14.47:14.88\n6\t107711199\t359522:2\tA\t]6:107710138]A\t14\tPASS\tEVDNC=ASSMB;INSERTION=TCCTCCCACTCACTCC;MAPQ=60;MATEID=359522:1;MATENM=1;NM=2;NUMPARTS=2;SCTG=c_6_107702001_107727001_125C;SPAN=1061;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:6:19:14.6:14.6,0,31.1:6:0:-14.47:14.88\n6\t111370154\t360501:1\tT\tT[6:111435576[\t22\tPASS\tEVDNC=ASSMB;INSERTION=AATTGCAGCACTATTC;MAPQ=60;MATEID=360501:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_111426001_111451001_23C;SPAN=65422;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:14:12.5:22.4,0,12.5:8:0:-22.62:22.62\n6\t111435576\t360501:2\tA\t]6:111370154]A\t22\tPASS\tEVDNC=ASSMB;INSERTION=AATTGCAGCACTATTC;MAPQ=60;MATEID=360501:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_111426001_111451001_23C;SPAN=65422;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:14:12.5:22.4,0,12.5:8:0:-22.62:22.62\n6\t113883834\t361285:1\tT\t]6:113930762]T\t26\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TC;MAPQ=60;MATEID=361285:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_113925001_113950001_52C;SPAN=46928;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:34:26.9:26.9,0,56.6:7:6:-26.75:27.42\n6\t113930762\t361285:2\tC\tC[6:113883834[\t26\tPASS\tDISC_MAPQ=52;EVDNC=ASDIS;HOMSEQ=TC;MAPQ=60;MATEID=361285:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_113925001_113950001_52C;SPAN=46928;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:34:26.9:26.9,0,56.6:7:6:-26.75:27.42\n6\t115303388\t361736:1\tG\tG[6:115303689[\t0\tPASS\tEVDNC=ASSMB;HOMSEQ=AAAATATTTTTTTTGTG;MAPQ=60;MATEID=361736:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_115297001_115322001_25C;SPAN=301;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/0:12:242:28:0,28,663.4:12:0:28.41:19.29\n6\t115303689\t361736:2\tA\t]6:115303388]A\t0\tPASS\tEVDNC=ASSMB;HOMSEQ=AAAATATTTTTTTTGTG;MAPQ=60;MATEID=361736:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_115297001_115322001_25C;SPAN=301;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/0:12:242:28:0,28,663.4:12:0:28.41:19.29\n6\t116429667\t362079:1\tG\tG[6:116429970[\t59\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AGAAATATGAGGAGTTG;MAPQ=60;MATEID=362079:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_116424001_116449001_4C;SPAN=303;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:20:13:5.4:59.4,5.4,0:14:8:-59.41:59.41\n6\t116429970\t362079:2\tA\t]6:116429667]A\t59\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AGAAATATGAGGAGTTG;MAPQ=60;MATEID=362079:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_116424001_116449001_4C;SPAN=303;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:20:13:5.4:59.4,5.4,0:14:8:-59.41:59.41\n6\t117477466\t362360:1\tA\t]6:117477573]A\t43\tPASS\tEVDNC=ASSMB;INSERTION=AAT;MAPQ=60;MATEID=362360:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_117477501_117502501_43C;SPAN=107;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:16:34:40.1:43.4,0,40.1:16:0:-43.26:43.26\n6\t117477573\t362360:2\tA\tA[6:117477466[\t43\tPASS\tEVDNC=ASSMB;INSERTION=AAT;MAPQ=60;MATEID=362360:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_117477501_117502501_43C;SPAN=107;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:16:34:40.1:43.4,0,40.1:16:0:-43.26:43.26\n6\t118940826\t362740:1\tA\t]6:118941155]A\t18\tPASS\tDISC_MAPQ=45;EVDNC=ASDIS;HOMSEQ=AG;MAPQ=60;MATEID=362740:2;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_6_118923001_118948001_18C;SPAN=329;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:40:18.5:18.5,0,81.2:9:2:-18.47:20.76\n6\t118941155\t362740:2\tG\tG[6:118940826[\t18\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AG;MAPQ=60;MATEID=362740:1;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_6_118923001_118948001_18C;SPAN=329;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:40:18.5:18.5,0,81.2:9:2:-18.47:20.76\n6\t120504096\t363278:1\tA\t]6:120504276]A\t43\tPASS\tEVDNC=ASSMB;HOMSEQ=A;MAPQ=60;MATEID=363278:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_120491001_120516001_16C;SPAN=180;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:17:44:43.7:43.7,0,66.8:17:0:-43.75:44.02\n6\t120504276\t363278:2\tA\tA[6:120504096[\t43\tPASS\tEVDNC=ASSMB;HOMSEQ=A;MAPQ=60;MATEID=363278:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_120491001_120516001_16C;SPAN=180;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:17:44:43.7:43.7,0,66.8:17:0:-43.75:44.02\n6\t120942553\t363442:1\tT\tT[6:120942778[\t72\tPASS\tEVDNC=ASSMB;HOMSEQ=CAACAGTTT;MAPQ=60;MATEID=363442:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_120932001_120957001_31C;SPAN=225;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:24:18:6.6:72.6,6.6,0:24:0:-72.62:72.62\n6\t120942778\t363442:2\tC\t]6:120942553]C\t72\tPASS\tEVDNC=ASSMB;HOMSEQ=CAACAGTTT;MAPQ=60;MATEID=363442:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_120932001_120957001_31C;SPAN=225;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:24:18:6.6:72.6,6.6,0:24:0:-72.62:72.62\n6\t120998160\t363470:1\tT\tT[6:120998471[\t22\tPASS\tEVDNC=ASSMB;HOMSEQ=CCTTTCCCATTCTT;MAPQ=60;MATEID=363470:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_120981001_121006001_34C;SPAN=311;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:14:12.5:22.4,0,12.5:8:0:-22.62:22.62\n6\t120998471\t363470:2\tC\t]6:120998160]C\t22\tPASS\tEVDNC=ASSMB;HOMSEQ=CCTTTCCCATTCTT;MAPQ=60;MATEID=363470:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_120981001_121006001_34C;SPAN=311;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:14:12.5:22.4,0,12.5:8:0:-22.62:22.62\n6\t121472042\t363657:1\tA\t]6:121472146]A\t49\tPASS\tEVDNC=ASSMB;INSERTION=C;MAPQ=60;MATEID=363657:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_121471001_121496001_6C;SPAN=104;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:18:36:39.5:49.4,0,39.5:18:0:-49.34:49.34\n6\t121472146\t363657:2\tC\tC[6:121472042[\t49\tPASS\tEVDNC=ASSMB;INSERTION=C;MAPQ=60;MATEID=363657:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_121471001_121496001_6C;SPAN=104;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:18:36:39.5:49.4,0,39.5:18:0:-49.34:49.34\n6\t121486357\t363669:1\tC\tC[6:121486645[\t14\tPASS\tEVDNC=ASSMB;HOMSEQ=GATCTCGGCTCACTGCAGCCTC;MAPQ=60;MATEID=363669:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_6_121471001_121496001_57C;SPAN=288;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:7:29:14.9:14.9,0,57.8:7:0:-14.96:16.39\n6\t121486645\t363669:2\tG\t]6:121486357]G\t14\tPASS\tEVDNC=ASSMB;HOMSEQ=GATCTCGGCTCACTGCAGCCTC;MAPQ=60;MATEID=363669:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_6_121471001_121496001_57C;SPAN=288;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:7:29:14.9:14.9,0,57.8:7:0:-14.96:16.39\n6\t122378179\t363918:1\tC\t]6:122587980]C\t22\tPASS\tDISC_MAPQ=46;EVDNC=DSCRD;IMPRECISE;MAPQ=46;MATEID=363918:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:122378179(-)-6:122587980(+)__6_122377501_122402501D;SPAN=209801;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:16:15.5:22.1,0,15.5:0:8:-21.93:21.93\n6\t122587980\t363918:2\tT\tT[6:122378179[\t22\tPASS\tDISC_MAPQ=30;EVDNC=DSCRD;IMPRECISE;MAPQ=30;MATEID=363918:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:122378179(-)-6:122587980(+)__6_122377501_122402501D;SPAN=209801;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:16:15.5:22.1,0,15.5:0:8:-21.93:21.93\n6\t122850286\t737285:1\tG\tG[15:70547227[\t99\tPASS\tDISC_MAPQ=29;EVDNC=ASDIS;INSERTION=C;MAPQ=0;MATEID=737285:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_15_70535501_70560501_58C;SPAN=-1;SUBN=9;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:50:22:13.8:151.8,13.8,0:38:23:-151.8:151.8\n6\t124177144\t364451:1\tA\tA[6:124177531[\t22\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=364451:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_124166001_124191001_48C;SPAN=387;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:27:22.1:22.1,0,45.2:9:0:-22.12:22.58\n6\t124177531\t364451:2\tT\t]6:124177144]T\t22\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=364451:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_124166001_124191001_48C;SPAN=387;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:27:22.1:22.1,0,45.2:9:0:-22.12:22.58\n6\t125861963\t364956:1\tG\tG[6:125866159[\t56\tPASS\tDISC_MAPQ=57;EVDNC=DSCRD;IMPRECISE;MAPQ=57;MATEID=364956:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:125861963(+)-6:125866159(-)__6_125856501_125881501D;SPAN=4196;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:19:8:5.1:56.1,5.1,0:0:19:-56.11:56.11\n6\t125866159\t364956:2\tG\t]6:125861963]G\t56\tPASS\tDISC_MAPQ=55;EVDNC=DSCRD;IMPRECISE;MAPQ=55;MATEID=364956:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:125861963(+)-6:125866159(-)__6_125856501_125881501D;SPAN=4196;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:19:8:5.1:56.1,5.1,0:0:19:-56.11:56.11\n6\t126917735\t365070:1\tG\tG[6:126919915[\t38\tPASS\tEVDNC=ASSMB;HOMSEQ=G;MAPQ=60;MATEID=365070:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_126910001_126935001_16C;SPAN=2180;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:28:31.7:38.3,0,31.7:14:0:-38.37:38.37\n6\t126919915\t365070:2\tG\t]6:126917735]G\t38\tPASS\tEVDNC=ASSMB;HOMSEQ=G;MAPQ=60;MATEID=365070:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_126910001_126935001_16C;SPAN=2180;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:28:31.7:38.3,0,31.7:14:0:-38.37:38.37\n6\t128054467\t365326:1\tA\t]6:128144890]A\t36\tPASS\tEVDNC=ASSMB;INSERTION=ATTTATAATTATAAATTATAAATTTATAATTTATAATTT;MAPQ=60;MATEID=365326:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_6_128135001_128160001_15C;SPAN=90423;SUBN=7;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:24:23:36.2,0,23:13:0:-36.29:36.29\n6\t128144890\t365326:2\tT\tT[6:128054467[\t36\tPASS\tEVDNC=ASSMB;INSERTION=ATTTATAATTATAAATTATAAATTTATAATTTATAATTT;MAPQ=60;MATEID=365326:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_6_128135001_128160001_15C;SPAN=90423;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:24:23:36.2,0,23:13:0:-36.29:36.29\n6\t130638263\t366051:1\tT\tT[6:130638570[\t72\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=CCCCAAAACTTCTT;MAPQ=60;MATEID=366051:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_130634001_130659001_8C;SPAN=307;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:24:15:6.6:72.6,6.6,0:18:6:-72.62:72.62\n6\t130638570\t366051:2\tC\t]6:130638263]C\t72\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=CCCCAAAACTTCTT;MAPQ=60;MATEID=366051:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_130634001_130659001_8C;SPAN=307;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:24:15:6.6:72.6,6.6,0:18:6:-72.62:72.62\n6\t133020695\t366763:1\tT\tT[6:133026747[\t65\tPASS\tEVDNC=ASSMB;HOMSEQ=AGGTGTGATGTTTT;MAPQ=60;MATEID=366763:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_133010501_133035501_54C;SPAN=6052;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:23:38:29:65.3,0,29:23:0:-65.93:65.93\n6\t133026747\t366763:2\tA\t]6:133020695]A\t65\tPASS\tEVDNC=ASSMB;HOMSEQ=AGGTGTGATGTTTT;MAPQ=60;MATEID=366763:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_133010501_133035501_54C;SPAN=6052;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:23:38:29:65.3,0,29:23:0:-65.93:65.93\n6\t133050362\t366771:1\tT\tT[6:133050693[\t10\tPASS\tEVDNC=ASSMB;HOMSEQ=GCCAATTTTTCTTT;MAPQ=60;MATEID=366771:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_133035001_133060001_2C;SPAN=331;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:69:10.4:10.4,0,162.2:9:0:-10.31:18.4\n6\t133050693\t366771:2\tG\t]6:133050362]G\t10\tPASS\tEVDNC=ASSMB;HOMSEQ=GCCAATTTTTCTTT;MAPQ=60;MATEID=366771:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_133035001_133060001_2C;SPAN=331;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:69:10.4:10.4,0,162.2:9:0:-10.31:18.4\n6\t133947842\t366979:1\tG\tG[6:133948587[\t37\tPASS\tEVDNC=ASSMB;HOMSEQ=AGAG;MAPQ=60;MATEID=366979:2;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_6_133941501_133966501_10C;SPAN=745;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:33:37.1:37.1,0,43.7:14:0:-36.94:36.99\n6\t133948587\t366979:2\tA\t]6:133947842]A\t37\tPASS\tEVDNC=ASSMB;HOMSEQ=AGAG;MAPQ=60;MATEID=366979:1;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_6_133941501_133966501_10C;SPAN=745;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:33:37.1:37.1,0,43.7:14:0:-36.94:36.99\n6\t135509695\t367689:1\tG\t[6:136518755[G\t36\tPASS\tDISC_MAPQ=45;EVDNC=ASDIS;INSERTION=TTGTGTGGTGCA;MAPQ=60;MATEID=367689:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_136514001_136539001_14C;SPAN=1009060;SUBN=4;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:24:23:36.2,0,23:9:4:-36.29:36.29\n6\t136518755\t367689:2\tA\t[6:135509695[A\t36\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;INSERTION=TTGTGTGGTGCA;MAPQ=60;MATEID=367689:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_136514001_136539001_14C;SPAN=1009060;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:24:23:36.2,0,23:9:4:-36.29:36.29\n6\t136992557\t367825:1\tT\tT[6:136993050[\t99\tPASS\tEVDNC=ASSMB;HOMSEQ=T;MAPQ=60;MATEID=367825:2;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_6_136979501_137004501_57C;SPAN=493;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:34:18:9.3:102.3,9.3,0:34:0:-102.3:102.3\n6\t136993050\t367825:2\tT\t]6:136992557]T\t99\tPASS\tEVDNC=ASSMB;HOMSEQ=T;MAPQ=60;MATEID=367825:1;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_6_136979501_137004501_57C;SPAN=493;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:34:18:9.3:102.3,9.3,0:34:0:-102.3:102.3\n6\t138626611\t368262:1\tA\tA[6:138626919[\t35\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AAAAAAAATTGTA;MAPQ=60;MATEID=368262:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_138621001_138646001_87C;SPAN=308;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:27:32:35.3,0,32:11:5:-35.33:35.33\n6\t138626919\t368262:2\tA\t]6:138626611]A\t35\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AAAAAAAATTGTA;MAPQ=60;MATEID=368262:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_138621001_138646001_87C;SPAN=308;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:27:32:35.3,0,32:11:5:-35.33:35.33\n6\t139281458\t368489:1\tT\tT[6:139285973[\t36\tPASS\tDISC_MAPQ=59;EVDNC=DSCRD;IMPRECISE;MAPQ=59;MATEID=368489:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:139281458(+)-6:139285973(-)__6_139282501_139307501D;SPAN=4515;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:12:9:3.3:36.3,3.3,0:0:12:-36.31:36.31\n6\t139285973\t368489:2\tC\t]6:139281458]C\t36\tPASS\tDISC_MAPQ=49;EVDNC=DSCRD;IMPRECISE;MAPQ=49;MATEID=368489:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:139281458(+)-6:139285973(-)__6_139282501_139307501D;SPAN=4515;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:12:9:3.3:36.3,3.3,0:0:12:-36.31:36.31\n6\t141227487\t369042:1\tC\tC[6:141228894[\t20\tPASS\tEVDNC=ASSMB;INSERTION=TG;MAPQ=60;MATEID=369042:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_141218001_141243001_41C;SPAN=1407;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:32:20.9:20.9,0,57.2:9:0:-20.71:21.77\n6\t141228894\t369042:2\tT\t]6:141227487]T\t20\tPASS\tEVDNC=ASSMB;INSERTION=TG;MAPQ=60;MATEID=369042:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_141218001_141243001_41C;SPAN=1407;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:32:20.9:20.9,0,57.2:9:0:-20.71:21.77\n6\t144317788\t369819:1\tA\t]6:144336154]A\t27\tPASS\tEVDNC=ASSMB;INSERTION=AA;MAPQ=60;MATEID=369819:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_144329501_144354501_32C;SPAN=18366;SUBN=2;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:21:23.9:27.2,0,23.9:10:0:-27.11:27.11\n6\t144336154\t369819:2\tC\tC[6:144317788[\t27\tPASS\tEVDNC=ASSMB;INSERTION=AA;MAPQ=60;MATEID=369819:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_144329501_144354501_32C;SPAN=18366;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:21:23.9:27.2,0,23.9:10:0:-27.11:27.11\n6\t147050431\t842826:1\tC\t[19:13737615[C\t99\tPASS\tDISC_MAPQ=15;EVDNC=ASDIS;HOMSEQ=CCTGGCTAATTTTTGTATTTTTAGTAGAGA;INSERTION=AAGCCACCGTGTCCCGCCAGCATCCACCTGC;MAPQ=56;MATEID=842826:2;MATENM=0;NM=1;NUMPARTS=3;SCTG=c_19_13720001_13745001_137C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:38:14:10.5:115.5,10.5,0:37:7:-115.5:115.5\n6\t148915835\t370577:1\tA\t]6:148915968]A\t39\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=370577:2;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_6_148911001_148936001_6C;SPAN=133;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:24:19.7:39.5,0,19.7:14:0:-39.77:39.77\n6\t148915968\t370577:2\tA\tA[6:148915835[\t39\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=370577:1;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_6_148911001_148936001_6C;SPAN=133;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:24:19.7:39.5,0,19.7:14:0:-39.77:39.77\n6\t151416863\t371503:1\tG\t]6:152402215]G\t36\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=G;MAPQ=60;MATEID=371503:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_152390001_152415001_1C;SPAN=985352;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:12:14:0.6:36.3,0.6,0:10:10:-38:38\n6\t151501557\t371325:1\tA\t]6:151688188]A\t30\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AACTTCA;MAPQ=60;MATEID=371325:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_151679501_151704501_5C;SPAN=186631;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:33:30.5:30.5,0,50.3:8:9:-30.34:30.67\n6\t151549893\t371281:1\tG\t]6:151588711]G\t52\tPASS\tEVDNC=ASSMB;HOMSEQ=GC;MAPQ=60;MATEID=371281:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_151581501_151606501_4C;SPAN=38818;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:19:36:36.2:52.7,0,36.2:19:0:-52.72:52.72\n6\t151563417\t371335:1\tC\t]6:151724279]C\t66\tPASS\tEVDNC=ASSMB;HOMSEQ=CTCCC;MAPQ=60;MATEID=371335:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_151704001_151729001_20C;SPAN=160862;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:21:22:6:66,6,0:21:0:-66.02:66.02\n6\t151564431\t371273:1\tG\tG[6:151716324[\t20\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=GCAGG;MAPQ=60;MATEID=371273:2;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_6_151557001_151582001_15C;SPAN=151893;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:45:20.3:20.3,0,92.9:6:7:-20.36:23\n6\t151588711\t371281:2\tC\tC[6:151549893[\t52\tPASS\tEVDNC=ASSMB;HOMSEQ=GC;MAPQ=60;MATEID=371281:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_151581501_151606501_4C;SPAN=38818;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:19:36:36.2:52.7,0,36.2:19:0:-52.72:52.72\n6\t151688188\t371325:2\tA\tA[6:151501557[\t30\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AACTTCA;MAPQ=60;MATEID=371325:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_151679501_151704501_5C;SPAN=186631;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:33:30.5:30.5,0,50.3:8:9:-30.34:30.67\n6\t151716324\t371273:2\tG\t]6:151564431]G\t20\tPASS\tDISC_MAPQ=255;EVDNC=ASDIS;HOMSEQ=GCAGG;MAPQ=60;MATEID=371273:1;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_6_151557001_151582001_15C;SPAN=151893;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:45:20.3:20.3,0,92.9:6:7:-20.36:23\n6\t151724279\t371335:2\tC\tC[6:151563417[\t66\tPASS\tEVDNC=ASSMB;HOMSEQ=CTCCC;MAPQ=60;MATEID=371335:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_151704001_151729001_20C;SPAN=160862;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:21:22:6:66,6,0:21:0:-66.02:66.02\n6\t152402215\t371503:2\tG\tG[6:151416863[\t36\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=G;MAPQ=60;MATEID=371503:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_152390001_152415001_1C;SPAN=985352;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:12:14:0.6:36.3,0.6,0:10:10:-38:38\n6\t153202067\t371709:2\tG\t]3:177126512]G\t69\tPASS\tDISC_MAPQ=255;EVDNC=TSI_L;HOMSEQ=ATC;INSERTION=T;MAPQ=60;MATEID=371709:1;MATENM=0;NM=1;NUMPARTS=3;SCTG=c_6_153198501_153223501_16C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:23:18:6.3:69.3,6.3,0:23:0:-69.32:69.32\n6\t153202080\t371714:1\tG\tG]6:153202289]\t72\tPASS\tDISC_MAPQ=255;EVDNC=TSI_L;INSERTION=T;MAPQ=60;MATEID=371714:2;MATENM=1;NM=8;NUMPARTS=3;SCTG=c_6_153198501_153223501_16C;SPAN=209;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:23:24:6.6:72.6,6.6,0:23:0:-72.62:72.62\n6\t153202289\t371714:2\tT\tT]6:153202080]\t72\tPASS\tDISC_MAPQ=255;EVDNC=TSI_L;INSERTION=T;MAPQ=60;MATEID=371714:1;MATENM=8;NM=1;NUMPARTS=3;SCTG=c_6_153198501_153223501_16C;SPAN=209;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:23:24:6.6:72.6,6.6,0:23:0:-72.62:72.62\n6\t153202309\t371708:2\tT\t]3:177122919]T\t92\tPASS\tDISC_MAPQ=58;EVDNC=DSCRD;IMPRECISE;MAPQ=58;MATEID=371708:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=3:177122919(+)-6:153202309(-)__6_153198501_153223501D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:31:6:8.4:92.4,8.4,0:0:31:-92.42:92.42\n6\t153224432\t371723:1\tC\t]6:153230983]C\t29\tPASS\tDISC_MAPQ=51;EVDNC=ASDIS;MAPQ=60;MATEID=371723:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_153223001_153248001_26C;SPAN=6551;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:24:29.6:29.6,0,29.6:5:8:-29.57:29.57\n6\t153230983\t371723:2\tT\tT[6:153224432[\t29\tPASS\tDISC_MAPQ=55;EVDNC=ASDIS;MAPQ=60;MATEID=371723:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_153223001_153248001_26C;SPAN=6551;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:24:29.6:29.6,0,29.6:5:8:-29.57:29.57\n6\t154142158\t371950:1\tT\t[6:154142366[T\t22\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=371950:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:154142158(-)-6:154142366(-)__6_154129501_154154501D;SPAN=208;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:16:15.5:22.1,0,15.5:0:8:-21.93:21.93\n6\t154142366\t371950:2\tA\t[6:154142158[A\t22\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=371950:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:154142158(-)-6:154142366(-)__6_154129501_154154501D;SPAN=208;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:16:15.5:22.1,0,15.5:0:8:-21.93:21.93\n6\t155599677\t372340:1\tG\t]6:155680578]G\t66\tPASS\tEVDNC=ASSMB;HOMSEQ=GT;MAPQ=60;MATEID=372340:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_6_155673001_155698001_4C;SPAN=80901;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:22:15:6:66,6,0:22:0:-66.02:66.02\n6\t155680578\t372340:2\tT\tT[6:155599677[\t66\tPASS\tEVDNC=ASSMB;HOMSEQ=GT;MAPQ=60;MATEID=372340:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_6_155673001_155698001_4C;SPAN=80901;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:22:15:6:66,6,0:22:0:-66.02:66.02\n6\t157310372\t372674:1\tG\t]6:157313583]G\t52\tPASS\tDISC_MAPQ=255;EVDNC=TSI_L;HOMSEQ=TCATAGTGCCCCAGTGT;INSERTION=A;MAPQ=11;MATEID=372674:2;MATENM=2;NM=5;NUMPARTS=4;SCTG=c_6_157290001_157315001_28C;SPAN=3211;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:21:59:52.7:52.7,0,95.6:19:2:-52.74:53.42\n6\t157312929\t372795:1\tA\t]6:157313583]A\t24\tPASS\tDISC_MAPQ=0;EVDNC=TSI_L;HOMSEQ=TCATCATAGTGCCCCAGTGTTCGCTCACCTGGCCTCATCATAGTGTCCCAGATTGCACTCAACTGGCCTCATCATAGTGACCCAGTGGGCGCTCACCCGGCATCACCATAGTGTCCCAGTGTGCGCTTACCCGGCCTCATCACAGTGCCCCAGTGTGCGCTCACCCGGCCTCATCATAGTGCCTCAGTGTGCTCTCGCCTAGCCTCATCATAGTGTCCCAGTG;INSERTION=ATTGCACTCAACTGGCCTCATCATAGTGACCCAGTGGGCGCTCACCCGGCATCACCATAGTGTCCCAGTGTGCGCTTACCCGGCCTCATCAC;MAPQ=60;MATEID=372795:2;MATENM=1;NM=2;NUMPARTS=3;SCTG=c_6_157290001_157315001_127C;SPAN=654;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:21:161:24.1:24.1,0,380.6:19:2:-24.07:42.94\n6\t157313583\t372795:2\tG\tG[6:157312929[\t24\tPASS\tDISC_MAPQ=0;EVDNC=TSI_L;HOMSEQ=TCATCATAGTGCCCCAGTGTTCGCTCACCTGGCCTCATCATAGTGTCCCAGATTGCACTCAACTGGCCTCATCATAGTGACCCAGTGGGCGCTCACCCGGCATCACCATAGTGTCCCAGTGTGCGCTTACCCGGCCTCATCACAGTGCCCCAGTGTGCGCTCACCCGGCCTCATCATAGTGCCTCAGTGTGCTCTCGCCTAGCCTCATCATAGTGTCCCAGTG;INSERTION=ATTGCACTCAACTGGCCTCATCATAGTGACCCAGTGGGCGCTCACCCGGCATCACCATAGTGTCCCAGTGTGCGCTTACCCGGCCTCATCAC;MAPQ=60;MATEID=372795:1;MATENM=2;NM=1;NUMPARTS=3;SCTG=c_6_157290001_157315001_127C;SPAN=654;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:21:161:24.1:24.1,0,380.6:19:2:-24.07:42.94\n6\t157313583\t372674:2\tG\tG[6:157310372[\t52\tPASS\tDISC_MAPQ=0;EVDNC=TSI_L;HOMSEQ=TCATAGTGCCCCAGTGT;INSERTION=A;MAPQ=46;MATEID=372674:1;MATENM=5;NM=2;NUMPARTS=4;SCTG=c_6_157290001_157315001_28C;SPAN=3211;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:21:59:52.7:52.7,0,95.6:19:2:-52.74:53.42\n6\t158127250\t373083:1\tC\tC[6:158128035[\t70\tPASS\tEVDNC=ASSMB;HOMSEQ=GAAAAATGAACATATC;MAPQ=60;MATEID=373083:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_6_158123001_158148001_9C;SPAN=785;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:24:30:4.7:70.7,0,4.7:24:0:-74.22:74.22\n6\t158128035\t373083:2\tG\t]6:158127250]G\t70\tPASS\tEVDNC=ASSMB;HOMSEQ=GAAAAATGAACATATC;MAPQ=60;MATEID=373083:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_6_158123001_158148001_9C;SPAN=785;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:24:30:4.7:70.7,0,4.7:24:0:-74.22:74.22\n6\t161982335\t374113:1\tT\tT[6:161983920[\t52\tPASS\tDISC_MAPQ=56;EVDNC=DSCRD;IMPRECISE;MAPQ=56;MATEID=374113:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:161982335(+)-6:161983920(-)__6_161969501_161994501D;SPAN=1585;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:18:10:4.8:52.8,4.8,0:0:18:-52.81:52.81\n6\t161983920\t374113:2\tA\t]6:161982335]A\t52\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=374113:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:161982335(+)-6:161983920(-)__6_161969501_161994501D;SPAN=1585;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:18:10:4.8:52.8,4.8,0:0:18:-52.81:52.81\n6\t162219796\t374192:1\tA\t]6:162229285]A\t18\tPASS\tEVDNC=ASSMB;HOMSEQ=AT;MAPQ=60;MATEID=374192:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_162214501_162239501_8C;SPAN=9489;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:27:18.8:18.8,0,48.5:8:0:-18.82:19.57\n6\t162229285\t374192:2\tT\tT[6:162219796[\t18\tPASS\tEVDNC=ASSMB;HOMSEQ=AT;MAPQ=60;MATEID=374192:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_162214501_162239501_8C;SPAN=9489;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:27:18.8:18.8,0,48.5:8:0:-18.82:19.57\n6\t162379810\t374213:1\tA\tA[6:162380510[\t22\tPASS\tEVDNC=ASSMB;INSERTION=ATATGTGTGTA;MAPQ=60;MATEID=374213:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_162361501_162386501_24C;SPAN=700;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:13:9.5:22.7,0,9.5:8:0:-23.02:23.02\n6\t162380510\t374213:2\tT\t]6:162379810]T\t22\tPASS\tEVDNC=ASSMB;INSERTION=ATATGTGTGTA;MAPQ=60;MATEID=374213:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_162361501_162386501_24C;SPAN=700;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:13:9.5:22.7,0,9.5:8:0:-23.02:23.02\n6\t163482678\t742255:1\tA\t]15:86013468]A\t23\tPASS\tDISC_MAPQ=25;EVDNC=DSCRD;IMPRECISE;MAPQ=25;MATEID=742255:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:163482678(-)-15:86013468(+)__15_85995001_86020001D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:10:0.5:23.6,0,0.5:0:8:-24.74:24.74\n6\t167074701\t375348:1\tG\tG[6:167076088[\t39\tPASS\tDISC_MAPQ=58;EVDNC=DSCRD;IMPRECISE;MAPQ=58;MATEID=375348:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:167074701(+)-6:167076088(-)__6_167065501_167090501D;SPAN=1387;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:13:4:3.6:39.6,3.6,0:0:13:-39.61:39.61\n6\t167076088\t375348:2\tT\t]6:167074701]T\t39\tPASS\tDISC_MAPQ=57;EVDNC=DSCRD;IMPRECISE;MAPQ=57;MATEID=375348:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:167074701(+)-6:167076088(-)__6_167065501_167090501D;SPAN=1387;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:13:4:3.6:39.6,3.6,0:0:13:-39.61:39.61\n6\t167223020\t375377:1\tT\t[6:167284198[T\t29\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=375377:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:167223020(-)-6:167284198(-)__6_167212501_167237501D;SPAN=61178;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:10:4:2.7:29.7,2.7,0:0:10:-29.71:29.71\n6\t167284198\t375377:2\tC\t[6:167223020[C\t29\tPASS\tDISC_MAPQ=56;EVDNC=DSCRD;IMPRECISE;MAPQ=56;MATEID=375377:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:167223020(-)-6:167284198(-)__6_167212501_167237501D;SPAN=61178;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:10:4:2.7:29.7,2.7,0:0:10:-29.71:29.71\n6\t167651416\t375568:1\tT\t]6:167652053]T\t46\tPASS\tDISC_MAPQ=36;EVDNC=DSCRD;IMPRECISE;MAPQ=36;MATEID=375568:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:167651416(-)-6:167652053(+)__6_167629001_167654001D;SPAN=637;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:14:15:4.2:46.2,4.2,0:0:14:-46.19:46.19\n6\t167652053\t375568:2\tG\tG[6:167651416[\t46\tPASS\tDISC_MAPQ=50;EVDNC=DSCRD;IMPRECISE;MAPQ=50;MATEID=375568:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:167651416(-)-6:167652053(+)__6_167629001_167654001D;SPAN=637;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:14:15:4.2:46.2,4.2,0:0:14:-46.19:46.19\n6\t168659522\t375788:1\tT\t]6:168660106]T\t20\tPASS\tDISC_MAPQ=32;EVDNC=DSCRD;IMPRECISE;MAPQ=32;MATEID=375788:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:168659522(-)-6:168660106(+)__6_168658001_168683001D;SPAN=584;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:22:20.3:20.3,0,33.5:0:8:-20.22:20.45\n6\t168660106\t375788:2\tG\tG[6:168659522[\t20\tPASS\tDISC_MAPQ=47;EVDNC=DSCRD;IMPRECISE;MAPQ=47;MATEID=375788:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:168659522(-)-6:168660106(+)__6_168658001_168683001D;SPAN=584;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:22:20.3:20.3,0,33.5:0:8:-20.22:20.45\n6\t169996908\t904003:1\tT\t[21:38913836[T\t99\tPASS\tDISC_MAPQ=42;EVDNC=DSCRD;IMPRECISE;MAPQ=50;MATEID=904003:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_21_38906001_38931001_16C;SPAN=-1;SUBN=6;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:66:51:18.3:201.3,18.3,0:61:10:-201.3:201.3\n6\t170452835\t983884:1\tG\t]6:170453005]G\t23\tPASS\tDISC_MAPQ=255;EVDNC=TSI_L;HOMSEQ=GTGTTAGTGTGAGTGTATGTGGGAGTGAG;MAPQ=60;MATEID=983884:2;MATENM=6;NM=5;NUMPARTS=3;SCTG=c_257_171501_196501_22C;SPAN=170;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:8:0:2.1:23.1,2.1,0:8:0:-23.11:23.11\n6\t170453005\t983884:2\tG\tG[6:170452835[\t23\tPASS\tDISC_MAPQ=255;EVDNC=TSI_L;HOMSEQ=GTGTTAGTGTGAGTGTATGTGGGAGTGAG;MAPQ=60;MATEID=983884:1;MATENM=5;NM=6;NUMPARTS=3;SCTG=c_257_171501_196501_22C;SPAN=170;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:8:0:2.1:23.1,2.1,0:8:0:-23.11:23.11\n7\t237846\t376498:1\tG\tG[7:240253[\t99\tPASS\tDISC_MAPQ=55;EVDNC=ASDIS;INSERTION=ATGGTGGTGGAGGTGATGA;MAPQ=60;MATEID=376498:2;MATENM=1;NM=4;NUMPARTS=3;SCTG=c_7_220501_245501_24C;SPAN=2407;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:47:135:99:117.2,0,222.8:36:13:-117.2:119\n7\t240253\t376498:2\tT\t]7:237846]T\t99\tPASS\tDISC_MAPQ=21;EVDNC=ASDIS;INSERTION=ATGGTGGTGGAGGTGATGA;MAPQ=54;MATEID=376498:1;MATENM=4;NM=1;NUMPARTS=3;SCTG=c_7_220501_245501_24C;SPAN=2407;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:47:135:99:117.2,0,222.8:36:13:-117.2:119\n7\t357206\t376618:1\tG\t]7:357333]G\t88\tPASS\tEVDNC=ASSMB;MAPQ=24;MATEID=376618:2;MATENM=6;NM=1;NUMPARTS=2;SCTG=c_7_343001_368001_58C;SPAN=127;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:32:62:65.3:88.4,0,65.3:32:0:-88.34:88.34\n7\t357333\t376618:2\tG\tG[7:357206[\t88\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=376618:1;MATENM=1;NM=6;NUMPARTS=2;SCTG=c_7_343001_368001_58C;SPAN=127;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:32:62:65.3:88.4,0,65.3:32:0:-88.34:88.34\n7\t566403\t376725:1\tT\t]7:566782]T\t17\tPASS\tDISC_MAPQ=19;EVDNC=DSCRD;IMPRECISE;MAPQ=19;MATEID=376725:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:566403(-)-7:566782(+)__7_563501_588501D;SPAN=379;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:32:17.6:17.6,0,60.5:0:8:-17.41:18.87\n7\t566782\t376725:2\tT\tT[7:566403[\t17\tPASS\tDISC_MAPQ=53;EVDNC=DSCRD;IMPRECISE;MAPQ=53;MATEID=376725:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:566403(-)-7:566782(+)__7_563501_588501D;SPAN=379;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:32:17.6:17.6,0,60.5:0:8:-17.41:18.87\n7\t1517281\t377054:1\tG\t]7:1517474]G\t39\tPASS\tEVDNC=ASSMB;HOMSEQ=GAATC;MAPQ=60;MATEID=377054:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_7_1494501_1519501_29C;SPAN=193;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:15:37:39.2:39.2,0,52.4:15:0:-39.11:39.25\n7\t1517474\t377054:2\tC\tC[7:1517281[\t39\tPASS\tEVDNC=ASSMB;HOMSEQ=GAATC;MAPQ=60;MATEID=377054:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_7_1494501_1519501_29C;SPAN=193;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:15:37:39.2:39.2,0,52.4:15:0:-39.11:39.25\n7\t1876939\t914635:1\tC\t[22:23429471[C\t26\tPASS\tDISC_MAPQ=49;EVDNC=DSCRD;IMPRECISE;MAPQ=49;MATEID=914635:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:1876939(-)-22:23429471(-)__22_23422001_23447001D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:23:26.6:26.6,0,29.9:0:10:-26.55:26.57\n7\t2308151\t377359:1\tA\t]7:2414980]A\t41\tPASS\tDISC_MAPQ=57;EVDNC=ASDIS;HOMSEQ=AGA;MAPQ=60;MATEID=377359:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_2401001_2426001_1C;SPAN=106829;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:15:27:25.4:41.9,0,25.4:12:11:-42.12:42.12\n7\t2414980\t377359:2\tA\tA[7:2308151[\t41\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AGA;MAPQ=60;MATEID=377359:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_2401001_2426001_1C;SPAN=106829;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:15:27:25.4:41.9,0,25.4:12:11:-42.12:42.12\n7\t4984059\t378369:1\tA\t[7:5730535[A\t17\tPASS\tDISC_MAPQ=54;EVDNC=DSCRD;IMPRECISE;MAPQ=54;MATEID=378369:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:4984059(-)-7:5730535(-)__7_5708501_5733501D;SPAN=746476;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:31:17.9:17.9,0,57.5:0:8:-17.69:19\n7\t5730535\t378369:2\tG\t[7:4984059[G\t17\tPASS\tDISC_MAPQ=32;EVDNC=DSCRD;IMPRECISE;MAPQ=32;MATEID=378369:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:4984059(-)-7:5730535(-)__7_5708501_5733501D;SPAN=746476;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:31:17.9:17.9,0,57.5:0:8:-17.69:19\n7\t5791828\t378412:1\tG\tG[19:8473352[\t29\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TCGGGAGGCTGAGGCAG;MAPQ=60;MATEID=378412:2;MATENM=2;NM=8;NUMPARTS=2;SCTG=c_7_5782001_5807001_18C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:10:7:2.7:29.7,2.7,0:10:5:-29.71:29.71\n7\t6923050\t378752:2\tG\tG[3:75414274[\t30\tPASS\tDISC_MAPQ=34;EVDNC=DSCRD;IMPRECISE;MAPQ=34;MATEID=378752:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=3:75414274(-)-7:6923050(+)__7_6909001_6934001D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:20:17.6:30.8,0,17.6:0:11:-30.82:30.82\n7\t8152563\t379134:1\tC\t]7:8152858]C\t8\tPASS\tDISC_MAPQ=28;EVDNC=TSI_L;HOMSEQ=CC;MAPQ=10;MATEID=379134:2;MATENM=10;NM=2;NUMPARTS=3;REPSEQ=CACCACCACCAC;SCTG=c_7_8134001_8159001_12C;SPAN=295;SUBN=3;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:36:8.5:8.5,0,18.2:7:6:-8.054:8.563\n7\t8152858\t379134:2\tC\tC[7:8152563[\t8\tPASS\tDISC_MAPQ=36;EVDNC=TSI_L;HOMSEQ=CC;MAPQ=18;MATEID=379134:1;MATENM=2;NM=10;NUMPARTS=3;REPSEQ=CACCACCACCAC;SCTG=c_7_8134001_8159001_12C;SPAN=295;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:36:8.5:8.5,0,18.2:7:6:-8.054:8.563\n7\t9051328\t379360:1\tA\t]Un_KN707939v1_decoy:5600]A\t99\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=379360:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_9040501_9065501_1C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:34:22:9.3:102.3,9.3,0:34:0:-102.3:102.3\n7\t9595130\t379530:1\tT\tT[7:9596347[\t99\tPASS\tDISC_MAPQ=59;EVDNC=DSCRD;IMPRECISE;MAPQ=59;MATEID=379530:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:9595130(+)-7:9596347(-)__7_9579501_9604501D;SPAN=1217;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:38:9:10.5:115.5,10.5,0:0:38:-115.5:115.5\n7\t9596347\t379530:2\tA\t]7:9595130]A\t99\tPASS\tDISC_MAPQ=58;EVDNC=DSCRD;IMPRECISE;MAPQ=58;MATEID=379530:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:9595130(+)-7:9596347(-)__7_9579501_9604501D;SPAN=1217;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:38:9:10.5:115.5,10.5,0:0:38:-115.5:115.5\n7\t14027456\t380736:1\tT\tT[7:14027663[\t17\tPASS\tEVDNC=ASSMB;INSERTION=AT;MAPQ=60;MATEID=380736:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_14014001_14039001_10C;SPAN=207;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:32:17.6:17.6,0,60.5:8:0:-17.41:18.87\n7\t14027663\t380736:2\tT\t]7:14027456]T\t17\tPASS\tEVDNC=ASSMB;INSERTION=AT;MAPQ=60;MATEID=380736:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_14014001_14039001_10C;SPAN=207;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:32:17.6:17.6,0,60.5:8:0:-17.41:18.87\n7\t14211423\t380770:1\tG\tG[7:14212338[\t89\tPASS\tDISC_MAPQ=52;EVDNC=ASDIS;HOMSEQ=TGTGATATTTACTCTCATGTTTTGTGATTTTACTCTCATGTTTTGTGATATTTACTCTCATGTTTTGTGATATTTACTCTCATGTTTTGTG;MAPQ=60;MATEID=380770:2;MATENM=5;NM=21;NUMPARTS=2;SCTG=c_7_14210001_14235001_11C;SPAN=915;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:29:2:8.1:89.1,8.1,0:13:18:-89.12:89.12\n7\t14212338\t380770:2\tT\t]7:14211423]T\t89\tPASS\tDISC_MAPQ=56;EVDNC=ASDIS;HOMSEQ=TGTGATATTTACTCTCATGTTTTGTGATTTTACTCTCATGTTTTGTGATATTTACTCTCATGTTTTGTGATATTTACTCTCATGTTTTGTG;MAPQ=60;MATEID=380770:1;MATENM=21;NM=5;NUMPARTS=2;SCTG=c_7_14210001_14235001_11C;SPAN=915;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:29:2:8.1:89.1,8.1,0:13:18:-89.12:89.12\n7\t15184371\t381082:1\tG\t]7:15184539]G\t14\tPASS\tEVDNC=ASSMB;HOMSEQ=GGAAGGAAGGGAGG;MAPQ=60;MATEID=381082:2;MATENM=0;NM=6;NUMPARTS=2;SCTG=c_7_15165501_15190501_14C;SPAN=168;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:6:20:14.3:14.3,0,34.1:6:0:-14.18:14.72\n7\t15184539\t381082:2\tG\tG[7:15184371[\t14\tPASS\tEVDNC=ASSMB;HOMSEQ=GGAAGGAAGGGAGG;MAPQ=60;MATEID=381082:1;MATENM=6;NM=0;NUMPARTS=2;SCTG=c_7_15165501_15190501_14C;SPAN=168;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:6:20:14.3:14.3,0,34.1:6:0:-14.18:14.72\n7\t15423545\t381167:1\tT\t]7:15423669]T\t92\tPASS\tEVDNC=ASSMB;INSERTION=TAACACGGTA;MAPQ=60;MATEID=381167:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_15410501_15435501_9C;SPAN=124;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:34:71:85.7:92.3,0,85.7:34:0:-92.29:92.29\n7\t15423669\t381167:2\tT\tT[7:15423545[\t92\tPASS\tEVDNC=ASSMB;INSERTION=TAACACGGTA;MAPQ=60;MATEID=381167:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_15410501_15435501_9C;SPAN=124;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:34:71:85.7:92.3,0,85.7:34:0:-92.29:92.29\n7\t15965553\t916271:1\tT\tT[22:28669897[\t7\tPASS\tEVDNC=ASSMB;HOMSEQ=AAAT;MAPQ=60;MATEID=916271:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_22_28665001_28690001_80C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:103:7.4:7.4,0,251.6:11:0:-7.359:21.48\n7\t18905828\t382078:1\tT\t]7:18936195]T\t38\tPASS\tEVDNC=ASSMB;HOMSEQ=TA;MAPQ=60;MATEID=382078:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_7_18914001_18939001_10C;SPAN=30367;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:29:34.7:38,0,34.7:14:0:-38.07:38.07\n7\t18936195\t382078:2\tA\tA[7:18905828[\t38\tPASS\tEVDNC=ASSMB;HOMSEQ=TA;MAPQ=60;MATEID=382078:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_7_18914001_18939001_10C;SPAN=30367;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:29:34.7:38,0,34.7:14:0:-38.07:38.07\n7\t19494848\t382261:1\tC\tC[7:19495294[\t99\tPASS\tDISC_MAPQ=50;EVDNC=TSI_L;HOMSEQ=ACGTATTTACGTGTGTATACACCCAGACGTATTTACGTGTGTATACAC;INSERTION=ACACACGTATTTACATATACACATATGTGTACACACACGTACGTACACGTGCGCGCACACGTACGTACACACGTGCGCGCACACGTACGTACACACGTGCGCGTACACGTACGTACACACGTACA;MAPQ=19;MATEID=382261:2;MATENM=5;NM=0;NUMPARTS=3;REPSEQ=CACA;SCTG=c_7_19477501_19502501_10C;SPAN=446;SUBN=2;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:68:42:18.9:207.9,18.9,0:67:10:-208:208\n7\t19495294\t382261:2\tT\t]7:19494848]T\t99\tPASS\tDISC_MAPQ=60;EVDNC=TSI_L;HOMSEQ=ACGTATTTACGTGTGTATACACCCAGACGTATTTACGTGTGTATACAC;INSERTION=ACACACGTATTTACATATACACATATGTGTACACACACGTACGTACACGTGCGCGCACACGTACGTACACACGTGCGCGCACACGTACGTACACACGTGCGCGTACACGTACGTACACACGTACA;MAPQ=60;MATEID=382261:1;MATENM=0;NM=5;NUMPARTS=3;REPSEQ=CACA;SCTG=c_7_19477501_19502501_10C;SPAN=446;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:68:42:18.9:207.9,18.9,0:67:10:-208:208\n7\t20669897\t771521:1\tT\tT[16:74811117[\t26\tPASS\tDISC_MAPQ=15;EVDNC=DSCRD;IMPRECISE;MAPQ=15;MATEID=771521:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:20669897(+)-16:74811117(-)__16_74798501_74823501D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:37:26:26,0,65.6:0:11:-25.91:26.93\n7\t23776047\t383518:1\tA\t[7:23798524[A\t99\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AGAAAAAGCCTTTGATAAAATT;MAPQ=60;MATEID=383518:2;MATENM=9;NM=0;NUMPARTS=2;SCTG=c_7_23789501_23814501_18C;SPAN=22477;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:43:13:12:132,12,0:39:4:-132:132\n7\t23776228\t383519:1\tG\tG]7:23798402]\t39\tPASS\tDISC_MAPQ=52;EVDNC=DSCRD;IMPRECISE;MAPQ=52;MATEID=383519:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:23776228(+)-7:23798402(+)__7_23789501_23814501D;SPAN=22174;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:13:11:3.6:39.6,3.6,0:0:13:-39.61:39.61\n7\t23798402\t383519:2\tA\tA]7:23776228]\t39\tPASS\tDISC_MAPQ=56;EVDNC=DSCRD;IMPRECISE;MAPQ=56;MATEID=383519:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:23776228(+)-7:23798402(+)__7_23789501_23814501D;SPAN=22174;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:13:11:3.6:39.6,3.6,0:0:13:-39.61:39.61\n7\t23798524\t383518:2\tA\t[7:23776047[A\t99\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AGAAAAAGCCTTTGATAAAATT;MAPQ=60;MATEID=383518:1;MATENM=0;NM=9;NUMPARTS=2;SCTG=c_7_23789501_23814501_18C;SPAN=22477;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:43:13:12:132,12,0:39:4:-132:132\n7\t24409092\t8608:2\tT\tT[1:33050733[\t99\tPASS\tEVDNC=ASSMB;INSERTION=G;MAPQ=60;MATEID=8608:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_33050501_33075501_8C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:37:32:10.2:112.2,10.2,0:37:0:-112.2:112.2\n7\t25047891\t383809:1\tC\tC[13:60888202[\t99\tPASS\tDISC_MAPQ=6;EVDNC=ASDIS;INSERTION=TCTC;MAPQ=16;MATEID=383809:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_25039001_25064001_16C;SPAN=-1;SUBN=1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:35:24:9.6:105.6,9.6,0:27:12:-105.6:105.6\n7\t26097503\t384069:1\tC\tC[7:26105875[\t69\tPASS\tDISC_MAPQ=56;EVDNC=DSCRD;IMPRECISE;MAPQ=56;MATEID=384069:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:26097503(+)-7:26105875(-)__7_26092501_26117501D;SPAN=8372;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:23:2:6.3:69.3,6.3,0:0:23:-69.32:69.32\n7\t26105875\t384069:2\tC\t]7:26097503]C\t69\tPASS\tDISC_MAPQ=49;EVDNC=DSCRD;IMPRECISE;MAPQ=49;MATEID=384069:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:26097503(+)-7:26105875(-)__7_26092501_26117501D;SPAN=8372;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:23:2:6.3:69.3,6.3,0:0:23:-69.32:69.32\n7\t26183011\t384149:1\tT\t]7:26242794]T\t62\tPASS\tEVDNC=ASSMB;HOMSEQ=T;MAPQ=60;MATEID=384149:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_26239501_26264501_38C;SPAN=59783;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:21:17:5.7:62.7,5.7,0:21:0:-62.72:62.72\n7\t26201745\t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/1:10:45:20.3:20.3,0,92.9:10:0:-20.36:23\n7\t49485855\t404622:1\tG\tG[7:72934712[\t47\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=404622:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:49485855(+)-7:72934712(-)__7_72912001_72937001D;SPAN=23448857;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:18:44:47:47,0,63.5:0:18:-47.05:47.19\n7\t49498884\t391800:1\tG\t]7:49896199]G\t66\tPASS\tEVDNC=ASSMB;HOMSEQ=G;MAPQ=60;MATEID=391800:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_49882001_49907001_57C;SPAN=397315;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:22:22:6:66,6,0:22:0:-66.02:66.02\n7\t49512479\t391617:1\tT\tT[7:49512788[\t92\tPASS\tEVDNC=ASSMB;HOMSEQ=TCTACTGTCT;MAPQ=60;MATEID=391617:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_49490001_49515001_71C;SPAN=309;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:31:29:8.4:92.4,8.4,0:31:0:-92.42:92.42\n7\t49512788\t391617:2\tT\t]7:49512479]T\t92\tPASS\tEVDNC=ASSMB;HOMSEQ=TCTACTGTCT;MAPQ=60;MATEID=391617:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_49490001_49515001_71C;SPAN=309;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:31:29:8.4:92.4,8.4,0:31:0:-92.42:92.42\n7\t49562762\t391670:1\tT\t]7:49655378]T\t27\tPASS\tDISC_MAPQ=30;EVDNC=ASDIS;MAPQ=60;MATEID=391670:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_49539001_49564001_202C;SPAN=92616;SUBN=10;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:42:27.8:27.8,0,77.3:10:8:-27.81:29.13\n7\t49655378\t391670:2\tG\tG[7:49562762[\t27\tPASS\tDISC_MAPQ=28;EVDNC=ASDIS;MAPQ=9;MATEID=391670:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_49539001_49564001_202C;SPAN=92616;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:42:27.8:27.8,0,77.3:10:8:-27.81:29.13\n7\t49896199\t391800:2\tG\tG[7:49498884[\t66\tPASS\tEVDNC=ASSMB;HOMSEQ=G;MAPQ=60;MATEID=391800:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_49882001_49907001_57C;SPAN=397315;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:22:22:6:66,6,0:22:0:-66.02:66.02\n7\t51526615\t392293:1\tG\tG[7:51530993[\t35\tPASS\tEVDNC=ASSMB;INSERTION=CTGCA;MAPQ=60;MATEID=392293:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_51523501_51548501_40C;SPAN=4378;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:38:35.6:35.6,0,58.7:14:0:-35.53:35.88\n7\t51530993\t392293:2\tG\t]7:51526615]G\t35\tPASS\tEVDNC=ASSMB;INSERTION=CTGCA;MAPQ=60;MATEID=392293:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_51523501_51548501_40C;SPAN=4378;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:38:35.6:35.6,0,58.7:14:0:-35.53:35.88\n7\t52635403\t916274:1\tA\t]22:28669566]A\t0\tPASS\tEVDNC=ASSMB;HOMSEQ=AA;MAPQ=60;MATEID=916274:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_22_28665001_28690001_38C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:117:0.2:0.2,0,293.9:10:0:-0.1223:18.51\n7\t53199663\t392924:1\tT\tT[7:53200024[\t69\tPASS\tEVDNC=ASSMB;INSERTION=TTCTA;MAPQ=60;MATEID=392924:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_7_53189501_53214501_90C;SPAN=361;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:23:22:6.3:69.3,6.3,0:23:0:-69.32:69.32\n7\t53200024\t392924:2\tA\t]7:53199663]A\t69\tPASS\tEVDNC=ASSMB;INSERTION=TTCTA;MAPQ=60;MATEID=392924:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_7_53189501_53214501_90C;SPAN=361;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:23:22:6.3:69.3,6.3,0:23:0:-69.32:69.32\n7\t53906970\t393216:1\tG\t]7:53908079]G\t27\tPASS\tDISC_MAPQ=52;EVDNC=ASDIS;MAPQ=60;MATEID=393216:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_53900001_53925001_84C;SPAN=1109;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:44:27.2:27.2,0,83.3:5:10:-27.24:28.84\n7\t53908079\t393216:2\tT\tT[7:53906970[\t27\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;MAPQ=45;MATEID=393216:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_53900001_53925001_84C;SPAN=1109;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:44:27.2:27.2,0,83.3:5:10:-27.24:28.84\n7\t54601280\t393430:1\tC\tC[7:54601847[\t69\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=393430:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_7_54586001_54611001_8C;SPAN=567;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:23:22:6.3:69.3,6.3,0:23:0:-69.32:69.32\n7\t54601847\t393430:2\tG\t]7:54601280]G\t69\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=393430:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_7_54586001_54611001_8C;SPAN=567;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:23:22:6.3:69.3,6.3,0:23:0:-69.32:69.32\n7\t55219065\t393626:1\tA\tA[7:55221369[\t85\tPASS\tEVDNC=ASSMB;HOMSEQ=TGCAATGTGCTTTTA;MAPQ=60;MATEID=393626:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_55198501_55223501_105C;SPAN=2304;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:27:28:7.8:85.8,7.8,0:27:0:-85.82:85.82\n7\t55221369\t393626:2\tT\t]7:55219065]T\t85\tPASS\tEVDNC=ASSMB;HOMSEQ=TGCAATGTGCTTTTA;MAPQ=60;MATEID=393626:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_55198501_55223501_105C;SPAN=2304;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:27:28:7.8:85.8,7.8,0:27:0:-85.82:85.82\n7\t55904079\t393853:1\tA\tA[7:55904442[\t79\tPASS\tDISC_MAPQ=58;EVDNC=ASDIS;HOMSEQ=AA;MAPQ=60;MATEID=393853:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_7_55884501_55909501_2C;SPAN=363;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:26:9:7.2:79.2,7.2,0:14:13:-79.22:79.22\n7\t55904442\t393853:2\tA\t]7:55904079]A\t79\tPASS\tDISC_MAPQ=58;EVDNC=ASDIS;HOMSEQ=AA;MAPQ=60;MATEID=393853:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_7_55884501_55909501_2C;SPAN=363;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:26:9:7.2:79.2,7.2,0:14:13:-79.22:79.22\n7\t56150117\t393964:1\tA\tA[7:56152553[\t72\tPASS\tDISC_MAPQ=54;EVDNC=DSCRD;IMPRECISE;MAPQ=54;MATEID=393964:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:56150117(+)-7:56152553(-)__7_56129501_56154501D;SPAN=2436;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:24:3:6.6:72.6,6.6,0:0:24:-72.62:72.62\n7\t56152553\t393964:2\tA\t]7:56150117]A\t72\tPASS\tDISC_MAPQ=37;EVDNC=DSCRD;IMPRECISE;MAPQ=37;MATEID=393964:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:56150117(+)-7:56152553(-)__7_56129501_56154501D;SPAN=2436;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:24:3:6.6:72.6,6.6,0:0:24:-72.62:72.62\n7\t57216586\t394359:1\tA\t]7:57217236]A\t5\tPASS\tDISC_MAPQ=33;EVDNC=DSCRD;IMPRECISE;MAPQ=33;MATEID=394359:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:57216586(-)-7:57217236(+)__7_57207501_57232501D;SPAN=650;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:100:5:5,0,245.9:0:10:-4.901:19.22\n7\t57217236\t394359:2\tT\tT[7:57216586[\t5\tPASS\tDISC_MAPQ=56;EVDNC=DSCRD;IMPRECISE;MAPQ=56;MATEID=394359:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:57216586(-)-7:57217236(+)__7_57207501_57232501D;SPAN=650;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:100:5:5,0,245.9:0:10:-4.901:19.22\n7\t57297199\t394436:1\tG\tG[7:57297511[\t40\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AATAGAGATTGGG;MAPQ=60;MATEID=394436:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_57281001_57306001_145C;SPAN=312;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:22:13.7:40.1,0,13.7:10:7:-40.63:40.63\n7\t57297511\t394436:2\tA\t]7:57297199]A\t40\tPASS\tDISC_MAPQ=59;EVDNC=ASDIS;HOMSEQ=AATAGAGATTGGG;MAPQ=60;MATEID=394436:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_57281001_57306001_145C;SPAN=312;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:22:13.7:40.1,0,13.7:10:7:-40.63:40.63\n7\t57352716\t416796:1\tA\t]7:100788247]A\t23\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=416796:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:57352716(-)-7:100788247(+)__7_100768501_100793501D;SPAN=43435531;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:34:23.6:23.6,0,59.9:0:10:-23.45:24.42\n7\t57407679\t394499:1\tT\tT[7:57408178[\t40\tPASS\tEVDNC=ASSMB;INSERTION=GACAACTAACTACAAC;MAPQ=60;MATEID=394499:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_57403501_57428501_20C;SPAN=499;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:17:56:40.4:40.4,0,99.8:17:0:-40.38:41.8\n7\t57408178\t394499:2\tT\t]7:57407679]T\t40\tPASS\tEVDNC=ASSMB;INSERTION=GACAACTAACTACAAC;MAPQ=60;MATEID=394499:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_57403501_57428501_20C;SPAN=499;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:17:56:40.4:40.4,0,99.8:17:0:-40.38:41.8\n7\t57765386\t395084:1\tA\t]7:57766112]A\t56\tPASS\tDISC_MAPQ=32;EVDNC=ASDIS;HOMSEQ=AAAAAGAGTGTTTCCAACGTGCTGAATCAATATAAAGGTTTA;MAPQ=60;MATEID=395084:2;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_7_57746501_57771501_136C;SPAN=726;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:22:57:56.6:56.6,0,86.3:14:14:-56.6:56.95\n7\t57766112\t395084:2\tA\tA[7:57765386[\t56\tPASS\tDISC_MAPQ=52;EVDNC=ASDIS;HOMSEQ=AAAAAGAGTGTTTCCAACGTGCTGAATCAATATAAAGGTTTA;MAPQ=58;MATEID=395084:1;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_7_57746501_57771501_136C;SPAN=726;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:22:57:56.6:56.6,0,86.3:14:14:-56.6:56.95\n7\t57898025\t395257:1\tT\tT[7:57899685[\t96\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AGACAGAAGAATTCTGAGAAACTTCTTTGTGAT;MAPQ=60;MATEID=395257:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_7_57893501_57918501_75C;SPAN=1660;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:33:46:17:96.2,0,17:19:21:-98.83:98.83\n7\t57899685\t395257:2\tA\t]7:57898025]A\t96\tPASS\tDISC_MAPQ=58;EVDNC=ASDIS;HOMSEQ=AGACAGAAGAATTCTGAGAAACTTCTTTGTGAT;MAPQ=60;MATEID=395257:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_7_57893501_57918501_75C;SPAN=1660;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:33:46:17:96.2,0,17:19:21:-98.83:98.83\n7\t57906103\t395274:1\tT\tT[7:57915470[\t57\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TAGTTTTTATGTGAAGATATT;MAPQ=60;MATEID=395274:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_57893501_57918501_192C;SPAN=9367;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:21:43:50.6:57.2,0,50.6:16:8:-57.25:57.25\n7\t57915470\t395274:2\tT\t]7:57906103]T\t57\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TAGTTTTTATGTGAAGATATT;MAPQ=60;MATEID=395274:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_57893501_57918501_192C;SPAN=9367;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:21:43:50.6:57.2,0,50.6:16:8:-57.25:57.25\n7\t58048127\t395755:1\tA\t[16:36178073[A\t19\tPASS\tDISC_MAPQ=24;EVDNC=DSCRD;IMPRECISE;MAPQ=24;MATEID=395755:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:58048127(-)-16:36178073(-)__7_58040501_58065501D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:37:19.4:19.4,0,72.2:0:9:-19.31:21.11\n7\t58174911\t396363:1\tT\t]7:60121773]T\t23\tPASS\tDISC_MAPQ=36;EVDNC=DSCRD;IMPRECISE;MAPQ=36;MATEID=396363:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:58174911(-)-7:60121773(+)__7_60098501_60123501D;SPAN=1946862;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:8:8:2.1:23.1,2.1,0:0:8:-23.11:23.11\n7\t58175578\t396150:1\tG\t]7:58189271]G\t42\tPASS\tDISC_MAPQ=43;EVDNC=DSCRD;IMPRECISE;MAPQ=43;MATEID=396150:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:58175578(-)-7:58189271(+)__7_58187501_58212501D;SPAN=13693;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:14:13:3.9:42.9,3.9,0:0:14:-42.91:42.91\n7\t58175826\t397693:1\tG\tG[7:61967061[\t56\tPASS\tDISC_MAPQ=37;EVDNC=DSCRD;IMPRECISE;MAPQ=37;MATEID=397693:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:58175826(+)-7:61967061(-)__7_61960501_61985501D;SPAN=3791235;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:19:2:5.1:56.1,5.1,0:0:19:-56.11:56.11\n7\t58188890\t396165:1\tA\t]7:61964170]A\t92\tPASS\tDISC_MAPQ=48;EVDNC=DSCRD;IMPRECISE;MAPQ=48;MATEID=396165:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:58188890(-)-7:61964170(+)__7_58187501_58212501D;SPAN=3775280;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:30:4:8.4:92.4,8.4,0:0:30:-92.42:92.42\n7\t58189271\t396150:2\tA\tA[7:58175578[\t42\tPASS\tDISC_MAPQ=54;EVDNC=DSCRD;IMPRECISE;MAPQ=54;MATEID=396150:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:58175578(-)-7:58189271(+)__7_58187501_58212501D;SPAN=13693;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:14:13:3.9:42.9,3.9,0:0:14:-42.91:42.91\n7\t58189293\t396166:1\tT\tT[7:61967062[\t42\tPASS\tDISC_MAPQ=49;EVDNC=DSCRD;IMPRECISE;MAPQ=49;MATEID=396166:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:58189293(+)-7:61967062(-)__7_58187501_58212501D;SPAN=3777769;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:14:7:3.9:42.9,3.9,0:0:14:-42.91:42.91\n7\t58342553\t396226:1\tT\t]7:58796722]T\t29\tPASS\tDISC_MAPQ=21;EVDNC=DSCRD;IMPRECISE;MAPQ=21;MATEID=396226:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:58342553(-)-7:58796722(+)__7_58775501_58800501D;SPAN=454169;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:10:12:0:29.7,0,0:0:10:-31.35:31.35\n7\t58342809\t396402:1\tA\tA[7:60480878[\t22\tPASS\tDISC_MAPQ=26;EVDNC=DSCRD;IMPRECISE;MAPQ=26;MATEID=396402:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:58342809(+)-7:60480878(-)__7_60466001_60491001D;SPAN=2138069;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:50:22.4:22.4,0,101.6:0:11:-22.26:25.25\n7\t58796722\t396226:2\tA\tA[7:58342553[\t29\tPASS\tDISC_MAPQ=15;EVDNC=DSCRD;IMPRECISE;MAPQ=15;MATEID=396226:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:58342553(-)-7:58796722(+)__7_58775501_58800501D;SPAN=454169;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:10:12:0:29.7,0,0:0:10:-31.35:31.35\n7\t60039036\t396422:1\tC\tC[7:60527192[\t59\tPASS\tDISC_MAPQ=47;EVDNC=DSCRD;IMPRECISE;MAPQ=47;MATEID=396422:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:60039036(+)-7:60527192(-)__7_60515001_60540001D;SPAN=488156;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:20:19:5.4:59.4,5.4,0:0:20:-59.41:59.41\n7\t60039103\t396423:1\tT\tT[7:60535194[\t24\tPASS\tDISC_MAPQ=39;EVDNC=DSCRD;IMPRECISE;MAPQ=39;MATEID=396423:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:60039103(+)-7:60535194(-)__7_60515001_60540001D;SPAN=496091;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:31:24.5:24.5,0,50.9:0:10:-24.3:24.91\n7\t60121773\t396363:2\tA\tA[7:58174911[\t23\tPASS\tDISC_MAPQ=30;EVDNC=DSCRD;IMPRECISE;MAPQ=30;MATEID=396363:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:58174911(-)-7:60121773(+)__7_60098501_60123501D;SPAN=1946862;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:8:8:2.1:23.1,2.1,0:0:8:-23.11:23.11\n7\t60480878\t396402:2\tA\t]7:58342809]A\t22\tPASS\tDISC_MAPQ=22;EVDNC=DSCRD;IMPRECISE;MAPQ=22;MATEID=396402:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:58342809(+)-7:60480878(-)__7_60466001_60491001D;SPAN=2138069;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:50:22.4:22.4,0,101.6:0:11:-22.26:25.25\n7\t60527192\t396422:2\tA\t]7:60039036]A\t59\tPASS\tDISC_MAPQ=49;EVDNC=DSCRD;IMPRECISE;MAPQ=49;MATEID=396422:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:60039036(+)-7:60527192(-)__7_60515001_60540001D;SPAN=488156;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:20:19:5.4:59.4,5.4,0:0:20:-59.41:59.41\n7\t60527476\t396432:1\tC\tC[7:60535187[\t89\tPASS\tDISC_MAPQ=38;EVDNC=DSCRD;IMPRECISE;MAPQ=38;MATEID=396432:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:60527476(+)-7:60535187(-)__7_60515001_60540001D;SPAN=7711;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:31:46:23.6:89.6,0,23.6:0:31:-91.3:91.3\n7\t60535187\t396432:2\tC\t]7:60527476]C\t89\tPASS\tDISC_MAPQ=26;EVDNC=DSCRD;IMPRECISE;MAPQ=26;MATEID=396432:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:60527476(+)-7:60535187(-)__7_60515001_60540001D;SPAN=7711;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:31:46:23.6:89.6,0,23.6:0:31:-91.3:91.3\n7\t60535194\t396423:2\tG\t]7:60039103]G\t24\tPASS\tDISC_MAPQ=33;EVDNC=DSCRD;IMPRECISE;MAPQ=33;MATEID=396423:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:60039103(+)-7:60535194(-)__7_60515001_60540001D;SPAN=496091;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:31:24.5:24.5,0,50.9:0:10:-24.3:24.91\n7\t60922568\t396589:1\tT\tT]7:61053929]\t29\tPASS\tDISC_MAPQ=31;EVDNC=DSCRD;IMPRECISE;MAPQ=31;MATEID=396589:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:60922568(+)-7:61053929(+)__7_60907001_60932001D;SPAN=131361;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:36:29.6:29.6,0,59.3:0:12:-29.49:30.1\n7\t60996030\t396795:1\tT\t]7:60996925]T\t9\tPASS\tDISC_MAPQ=45;EVDNC=DSCRD;IMPRECISE;MAPQ=45;MATEID=396795:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:60996030(-)-7:60996925(+)__7_6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PARTS=2;SCTG=c_7_64851501_64876501_7C;SPAN=2235;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:82:48:22.8:250.8,22.8,0:82:0:-250.9:250.9\n7\t64952998\t400010:1\tT\tT[7:64953657[\t18\tPASS\tEVDNC=ASSMB;INSERTION=CTGTATC;MAPQ=60;MATEID=400010:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_64949501_64974501_72C;SPAN=659;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:100:18.2:18.2,0,232.7:14:0:-18.1:29.09\n7\t64953657\t400010:2\tT\t]7:64952998]T\t18\tPASS\tEVDNC=ASSMB;INSERTION=CTGTATC;MAPQ=60;MATEID=400010:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_64949501_64974501_72C;SPAN=659;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:100:18.2:18.2,0,232.7:14:0:-18.1:29.09\n7\t65084152\t400626:1\tA\tA[7:65773613[\t40\tPASS\tDISC_MAPQ=48;EVDNC=DSCRD;IMPRECISE;MAPQ=48;MATEID=400626:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:65084152(+)-7:65773613(-)__7_65758001_65783001D;SPAN=689461;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:21:103:40.4:40.4,0,218.6:0:21:-40.37:47.41\n7\t65340142\t475916:1\tA\t]8:127521605]A\t99\tPASS\tDISC_MAPQ=0;EVDNC=ASDIS;HOMSEQ=ATA;MAPQ=60;MATEID=475916:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_127498001_127523001_8C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:36:56:37.1:103.1,0,37.1:34:6:-104.7:104.7\n7\t65398431\t400347:1\tA\tA]7:101463616]\t58\tPASS\tDISC_MAPQ=57;EVDNC=DSCRD;IMPRECISE;MAPQ=57;MATEID=400347:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:65398431(+)-7:101463616(+)__7_65390501_65415501D;SPAN=36065185;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:20:27:8.9:58.4,0,8.9:0:20:-60.44:60.44\n7\t65418384\t400358:1\tA\tA]12:42898470]\t52\tPASS\tDISC_MAPQ=32;EVDNC=DSCRD;IMPRECISE;MAPQ=32;MATEID=400358:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:65418384(+)-12:42898470(+)__7_65415001_65440001D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:18:6:4.8:52.8,4.8,0:0:18:-52.81:52.81\n7\t65418509\t400359:1\tG\t[12:42898157[G\t75\tPASS\tDISC_MAPQ=31;EVDNC=DSCRD;IMPRECISE;MAPQ=31;MATEID=400359:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:65418509(-)-12:42898157(-)__7_65415001_65440001D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:25:13:6.9:75.9,6.9,0:0:25:-75.92:75.92\n7\t65499251\t541640:1\tG\tG]10:38950967]\t27\tPASS\tDISC_MAPQ=16;EVDNC=DSCRD;IMPRECISE;MAPQ=16;MATEID=541640:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:65499251(+)-10:38950967(+)__10_38930501_38955501D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:33:27.2:27.2,0,53.6:0:11:-27.04:27.59\n7\t65610610\t405317:1\tA\t[7:74063673[A\t67\tPASS\tDISC_MAPQ=36;EVDNC=ASDIS;INSERTION=GGGTTGTTACAAACAAAAACTCCAATTTACAAACAAAACAAAAAACACCAGGAGGTT;MAPQ=60;MATEID=405317:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_74063501_74088501_20C;SPAN=8453063;SUBN=1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:24:41:34.7:67.7,0,34.7:18:15:-68.24:68.24\n7\t65761388\t400629:1\tG\t]7:65764818]G\t38\tPASS\tDISC_MAPQ=49;EVDNC=ASDIS;HOMSEQ=GA;MAPQ=60;MATEID=400629:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_65758001_65783001_12C;SPAN=3430;SUBN=1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:17:65:38:38,0,123.8:10:10:-37.85:40.49\n7\t65764818\t400629:2\tA\tA[7:65761388[\t38\tPASS\tDISC_MAPQ=20;EVDNC=ASDIS;HOMSEQ=GA;MAPQ=22;MATEID=400629:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_65758001_65783001_12C;SPAN=3430;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:17:65:38:38,0,123.8:10:10:-37.85:40.49\n7\t65773613\t400626:2\tT\t]7:65084152]T\t40\tPASS\tDISC_MAPQ=17;EVDNC=DSCRD;IMPRECISE;MAPQ=17;MATEID=400626:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:65084152(+)-7:65773613(-)__7_65758001_65783001D;SPAN=689461;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:21:103:40.4:40.4,0,218.6:0:21:-40.37:47.41\n7\t66112826\t400824:2\tA\tA[1:225835379[\t23\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=400824:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:225835379(-)-7:66112826(+)__7_66101001_66126001D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:36:23:23,0,65.9:0:10:-22.89:24.13\n7\t66532417\t399907:2\tG\tG[7:64821074[\t31\tPASS\tDISC_MAPQ=53;EVDNC=ASDIS;HOMSEQ=TG;MAPQ=60;MATEID=399907:1;MATENM=0;NM=0;NUMPARTS=3;SCTG=c_7_64802501_64827501_30C;SECONDARY;SPAN=1711343;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:31:31.1:31.1,0,44.3:6:9:-30.9:31.08\n7\t67020338\t401208:1\tA\tA[Un_KN707615v1_decoy:1[\t99\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=401208:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_67007501_67032501_17C;SPAN=-1;SUBN=5;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:45:65:31.4:130.4,0,31.4:45:0:-133.5:133.5\n7\t67021538\t401212:1\tT\tT]7:72805222]\t15\tPASS\tDISC_MAPQ=18;EVDNC=DSCRD;IMPRECISE;MAPQ=18;MATEID=401212:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:67021538(+)-7:72805222(+)__7_67007501_67032501D;SPAN=5783684;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:64:15.2:15.2,0,143.9:0:10:-15.02:21.3\n7\t67048108\t401222:1\tG\tG]7:72779501]\t25\tPASS\tDISC_MAPQ=43;EVDNC=DSCRD;IMPRECISE;MAPQ=43;MATEID=401222:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:67048108(+)-7:72779501(+)__7_67032001_67057001D;SPAN=5731393;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:14:9.2:25.7,0,9.2:0:9:-26.19:26.19\n7\t67962940\t401745:2\tT\t]7:63836181]T\t99\tPASS\tDISC_MAPQ=57;EVDNC=TSI_L;INSERTION=GAGCTCAGCTGAACATCTTGATATTTTTTCCATATTGCATCAGCTAGAATTGCCTAAGTAGAGT;MAPQ=60;MATEID=401745:1;MATENM=1;NM=13;NUMPARTS=3;REPSEQ=AA;SCTG=c_7_67963001_67988001_2C;SPAN=4126759;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:84:13:23.4:257.4,23.4,0:82:18:-257.5:257.5\n7\t68949183\t402429:1\tC\t]7:68949334]C\t99\tPASS\tEVDNC=ASSMB;HOMSEQ=CCTCAGCCTCCCAAA;MAPQ=60;MATEID=402429:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_68943001_68968001_29C;SPAN=151;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:48:90:93.5:133.1,0,93.5:48:0:-133.5:133.5\n7\t68949334\t402429:2\tA\tA[7:68949183[\t99\tPASS\tEVDNC=ASSMB;HOMSEQ=CCTCAGCCTCCCAAA;MAPQ=60;MATEID=402429:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_68943001_68968001_29C;SPAN=151;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:48:90:93.5:133.1,0,93.5:48:0:-133.5:133.5\n7\t69663221\t402862:1\tT\tT[7:69731113[\t99\tPASS\tEVDNC=ASSMB;INSERTION=GAGCTCTGTTACATTAATGAGG;MAPQ=60;MATEID=402862:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_69727001_69752001_13C;SPAN=67892;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:35:28:9.6:105.6,9.6,0:35:0:-105.6:105.6\n7\t69731113\t402862:2\tG\t]7:69663221]G\t99\tPASS\tEVDNC=ASSMB;INSERTION=GAGCTCTGTTACATTAATGAGG;MAPQ=60;MATEID=402862:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_69727001_69752001_13C;SPAN=67892;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:35:28:9.6:105.6,9.6,0:35:0:-105.6:105.6\n7\t70126134\t403057:1\tT\tT[7:70138905[\t30\tPASS\tEVDNC=ASSMB;HOMSEQ=T;MAPQ=60;MATEID=403057:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_70119001_70144001_40C;SPAN=12771;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:55:30.8:30.8,0,106.7:14:0:-30.75:33.15\n7\t70138905\t403057:2\tT\t]7:70126134]T\t30\tPASS\tEVDNC=ASSMB;HOMSEQ=T;MAPQ=60;MATEID=403057:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_70119001_70144001_40C;SPAN=12771;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:55:30.8:30.8,0,106.7:14:0:-30.75:33.15\n7\t70139641\t403167:1\tA\tA[7:70426389[\t19\tPASS\tEVDNC=ASSMB;HOMSEQ=A;MAPQ=60;MATEID=403167:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_70413001_70438001_60C;SPAN=286748;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:37:19.4:19.4,0,72.2:9:0:-19.31:21.11\n7\t70145470\t403153:1\tG\tG[7:70382794[\t37\tPASS\tEVDNC=ASSMB;HOMSEQ=TG;MAPQ=60;MATEID=403153:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_70364001_70389001_0C;SPAN=237324;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:31:37.7:37.7,0,37.7:14:0:-37.5:37.51\n7\t70175631\t403093:1\tC\tC[7:70235698[\t32\tPASS\tDISC_MAPQ=58;EVDNC=DSCRD;IMPRECISE;MAPQ=58;MATEID=403093:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:70175631(+)-7:70235698(-)__7_70217001_70242001D;SPAN=60067;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:15:5.6:32,0,5.6:0:11:-33.15:33.15\n7\t70235698\t403093:2\tC\t]7:70175631]C\t32\tPASS\tDISC_MAPQ=50;EVDNC=DSCRD;IMPRECISE;MAPQ=50;MATEID=403093:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:70175631(+)-7:70235698(-)__7_70217001_70242001D;SPAN=60067;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:15:5.6:32,0,5.6:0:11:-33.15:33.15\n7\t70268522\t403109:1\tA\tA[7:70306354[\t31\tPASS\tDISC_MAPQ=37;EVDNC=DSCRD;IMPRECISE;MAPQ=37;MATEID=403109:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:70268522(+)-7:70306354(-)__7_70266001_70291001D;SPAN=37832;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:17:8.6:31.7,0,8.6:0:11:-32.06:32.06\n7\t70306354\t403109:2\tG\t]7:70268522]G\t31\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=403109:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:70268522(+)-7:70306354(-)__7_70266001_70291001D;SPAN=37832;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:17:8.6:31.7,0,8.6:0:11:-32.06:32.06\n7\t70382794\t403153:2\tT\t]7:70145470]T\t37\tPASS\tEVDNC=ASSMB;HOMSEQ=TG;MAPQ=60;MATEID=403153:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_70364001_70389001_0C;SPAN=237324;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:31:37.7:37.7,0,37.7:14:0:-37.5:37.51\n7\t70420834\t403170:1\tT\tT[7:70424245[\t21\tPASS\tEVDNC=ASSMB;HOMSEQ=CTGTCTT;MAPQ=60;MATEID=403170:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_70413001_70438001_21C;SPAN=3411;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:52:21.8:21.8,0,107.6:11:0:-21.69:25.03\n7\t70424245\t403170:2\tC\t]7:70420834]C\t21\tPASS\tEVDNC=ASSMB;HOMSEQ=CTGTCTT;MAPQ=60;MATEID=403170:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_70413001_70438001_21C;SPAN=3411;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:52:21.8:21.8,0,107.6:11:0:-21.69:25.03\n7\t70426389\t403167:2\tA\t]7:70139641]A\t19\tPASS\tEVDNC=ASSMB;HOMSEQ=A;MAPQ=60;MATEID=403167:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_70413001_70438001_60C;SPAN=286748;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:37:19.4:19.4,0,72.2:9:0:-19.31:21.11\n7\t70534124\t403303:1\tA\tA[7:70788701[\t99\tPASS\tEVDNC=ASSMB;HOMSEQ=A;MAPQ=60;MATEID=403303:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_70780501_70805501_85C;SPAN=254577;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:37:24:10.2:112.2,10.2,0:37:0:-112.2:112.2\n7\t70788701\t403303:2\tA\t]7:70534124]A\t99\tPASS\tEVDNC=ASSMB;HOMSEQ=A;MAPQ=60;MATEID=403303:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_70780501_70805501_85C;SPAN=254577;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:37:24:10.2:112.2,10.2,0:37:0:-112.2:112.2\n7\t70956104\t403416:1\tA\tA]7:70973945]\t88\tPASS\tDISC_MAPQ=59;EVDNC=DSCRD;IMPRECISE;MAPQ=59;MATEID=403416:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:70956104(+)-7:70973945(+)__7_70952001_70977001D;SPAN=17841;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:30:39:8.9:88.1,0,8.9:0:30:-91.66:91.66\n7\t70961199\t403420:1\tA\t[7:70973894[A\t99\tPASS\tDISC_MAPQ=56;EVDNC=ASDIS;HOMSEQ=T;MAPQ=60;MATEID=403420:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_7_70952001_70977001_2C;SPAN=12695;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:69:55:19.2:211.2,19.2,0:46:37:-211.3:211.3\n7\t70973894\t403420:2\tT\t[7:70961199[T\t99\tPASS\tDISC_MAPQ=59;EVDNC=ASDIS;HOMSEQ=T;MAPQ=60;MATEID=403420:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_7_70952001_70977001_2C;SPAN=12695;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:69:55:19.2:211.2,19.2,0:46:37:-211.3:211.3\n7\t70973945\t403416:2\tG\tG]7:70956104]\t88\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=403416:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:70956104(+)-7:70973945(+)__7_70952001_70977001D;SPAN=17841;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:30:39:8.9:88.1,0,8.9:0:30:-91.66:91.66\n7\t71747047\t403893:1\tA\tA[7:71747968[\t99\tPASS\tDISC_MAPQ=58;EVDNC=DSCRD;IMPRECISE;MAPQ=58;MATEID=403893:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:71747047(+)-7:71747968(-)__7_71736001_71761001D;SPAN=921;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:48:6:13.2:145.2,13.2,0:0:48:-145.2:145.2\n7\t71747968\t403893:2\tG\t]7:71747047]G\t99\tPASS\tDISC_MAPQ=59;EVDNC=DSCRD;IMPRECISE;MAPQ=59;MATEID=403893:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:71747047(+)-7:71747968(-)__7_71736001_71761001D;SPAN=921;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:48:6:13.2:145.2,13.2,0:0:48:-145.2:145.2\n7\t71849933\t13069:2\tC\t]1:53954830]C\t3\tPASS\tEVDNC=ASSMB;INSERTION=ACAGTACTACAATGAACACTCTTA;MAPQ=60;MATEID=13069:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_53949001_53974001_68C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:93:3.8:3.8,0,228.2:9:0:-3.568:17.17\n7\t72499762\t404355:1\tA\tA[9:69278069[\t13\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=404355:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:72499762(+)-9:69278069(-)__7_72495501_72520501D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:46:13.7:13.7,0,99.5:0:8:-13.48:17.45\n7\t72779501\t401222:2\tG\tG]7:67048108]\t25\tPASS\tDISC_MAPQ=33;EVDNC=DSCRD;IMPRECISE;MAPQ=33;MATEID=401222:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:67048108(+)-7:72779501(+)__7_67032001_67057001D;SPAN=5731393;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:14:9.2:25.7,0,9.2:0:9:-26.19:26.19\n7\t72805222\t401212:2\tC\tC]7:67021538]\t15\tPASS\tDISC_MAPQ=42;EVDNC=DSCRD;IMPRECISE;MAPQ=42;MATEID=401212:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:67021538(+)-7:72805222(+)__7_67007501_67032501D;SPAN=5783684;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:64:15.2:15.2,0,143.9:0:10:-15.02:21.3\n7\t72934712\t404622:2\tG\t]7:49485855]G\t47\tPASS\tDISC_MAPQ=18;EVDNC=DSCRD;IMPRECISE;MAPQ=18;MATEID=404622:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:49485855(+)-7:72934712(-)__7_72912001_72937001D;SPAN=23448857;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:18:44:47:47,0,63.5:0:18:-47.05:47.19\n7\t72949883\t405269:1\tT\t]7:73964039]T\t9\tPASS\tEVDNC=ASSMB;HOMSEQ=TT;MAPQ=60;MATEID=405269:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_73941001_73966001_52C;SPAN=1014156;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:62:9.2:9.2,0,144.5:8:0:-8.98:16.32\n7\t73508991\t404986:1\tC\tC[7:73509284[\t1\tPASS\tEVDNC=ASSMB;HOMSEQ=TGCACTCCAGCCTGGGC;MAPQ=60;MATEID=404986:2;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_7_73500001_73525001_19C;SPAN=293;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:101:1.4:1.4,0,252.2:9:0:-1.319:16.83\n7\t73509284\t404986:2\tT\t]7:73508991]T\t1\tPASS\tEVDNC=ASSMB;HOMSEQ=TGCACTCCAGCCTGGGC;MAPQ=60;MATEID=404986:1;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_7_73500001_73525001_19C;SPAN=293;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:101:1.4:1.4,0,252.2:9:0:-1.319:16.83\n7\t73775876\t405107:1\tA\tA[7:73776219[\t0\tPASS\tEVDNC=ASSMB;HOMSEQ=AAGAAATTGA;MAPQ=60;MATEID=405107:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_73769501_73794501_43C;SPAN=343;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/0:9:376:75.8:0,75.8,1099:9:0:75.98:11.6\n7\t73776219\t405107:2\tA\t]7:73775876]A\t0\tPASS\tEVDNC=ASSMB;HOMSEQ=AAGAAATTGA;MAPQ=60;MATEID=405107:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_73769501_73794501_43C;SPAN=343;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/0:9:376:75.8:0,75.8,1099:9:0:75.98:11.6\n7\t73931246\t405264:1\tC\tC[7:73931529[\t0\tPASS\tEVDNC=ASSMB;HOMSEQ=CTCTGTTGCCCAGGCTGGAGTGCAGTGGC;MAPQ=60;MATEID=405264:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_73916501_73941501_30C;SPAN=283;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/0:4:121:20.4:0,20.4,343.2:4:0:20.81:5.717\n7\t73931529\t405264:2\tC\t]7:73931246]C\t0\tPASS\tEVDNC=ASSMB;HOMSEQ=CTCTGTTGCCCAGGCTGGAGTGCAGTGGC;MAPQ=60;MATEID=405264:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_73916501_73941501_30C;SPAN=283;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/0:4:121:20.4:0,20.4,343.2:4:0:20.81:5.717\n7\t73964039\t405269:2\tT\tT[7:72949883[\t9\tPASS\tEVDNC=ASSMB;HOMSEQ=TT;MAPQ=60;MATEID=405269:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_73941001_73966001_52C;SPAN=1014156;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:62:9.2:9.2,0,144.5:8:0:-8.98:16.32\n7\t74063673\t405317:2\tT\t[7:65610610[T\t67\tPASS\tDISC_MAPQ=55;EVDNC=ASDIS;INSERTION=GGGTTGTTACAAACAAAAACTCCAATTTACAAACAAAACAAAAAACACCAGGAGGTT;MAPQ=60;MATEID=405317:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_74063501_74088501_20C;SPAN=8453063;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:24:41:34.7:67.7,0,34.7:18:15:-68.24:68.24\n7\t74135538\t405369:1\tC\tC[7:74136636[\t99\tPASS\tDISC_MAPQ=56;EVDNC=DSCRD;IMPRECISE;MAPQ=56;MATEID=405369:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:74135538(+)-7:74136636(-)__7_74112501_74137501D;SPAN=1098;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:56:18:15.6:171.6,15.6,0:0:56:-171.6:171.6\n7\t74136636\t405369:2\tT\t]7:74135538]T\t99\tPASS\tDISC_MAPQ=56;EVDNC=DSCRD;IMPRECISE;MAPQ=56;MATEID=405369:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:74135538(+)-7:74136636(-)__7_74112501_74137501D;SPAN=1098;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:56:18:15.6:171.6,15.6,0:0:56:-171.6:171.6\n7\t74414165\t405574:1\tG\tG[7:74416932[\t99\tPASS\tDISC_MAPQ=57;EVDNC=ASDIS;HOMSEQ=AGGCCAGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAG;MAPQ=60;MATEID=405574:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_7_74406501_74431501_111C;SPAN=2767;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:95:51:26.4:290.4,26.4,0:38:75:-290.5:290.5\n7\t74416932\t405574:2\tA\t]7:74414165]A\t99\tPASS\tDISC_MAPQ=56;EVDNC=ASDIS;HOMSEQ=AGGCCAGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAG;MAPQ=60;MATEID=405574:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_7_74406501_74431501_111C;SPAN=2767;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:95:51:26.4:290.4,26.4,0:38:75:-290.5:290.5\n7\t74689123\t405771:1\tG\t[9:97902289[G\t55\tPASS\tDISC_MAPQ=50;EVDNC=ASDIS;INSERTION=GCTGTAAAAATAATAAAAATAATAAACGGAGCTGCCTGGAGGCGGCCGCACTCG;MAPQ=60;MATEID=405771:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_74676001_74701001_30C;SPAN=-1;SUBN=4;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:21:50:55.4:55.4,0,68.6:19:2:-55.27:55.37\n7\t74689227\t405772:1\tG\tG[7:74690972[\t0\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=G;MAPQ=60;MATEID=405772:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_74676001_74701001_24C;SPAN=1745;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/0:8:95:0:0,0,237.6:7:2:0.2957:14.75\n7\t74690972\t405772:2\tG\t]7:74689227]G\t0\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=G;MAPQ=60;MATEID=405772:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_74676001_74701001_24C;SPAN=1745;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/0:8:95:0:0,0,237.6:7:2:0.2957:14.75\n7\t74691113\t405776:1\tT\tT[7:74698961[\t2\tPASS\tEVDNC=ASSMB;HOMSEQ=GT;MAPQ=60;MATEID=405776:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_74676001_74701001_21C;SPAN=7848;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:122:2.3:2.3,0,302.6:11:0:-2.018:20.63\n7\t74698961\t405776:2\tG\t]7:74691113]G\t2\tPASS\tEVDNC=ASSMB;HOMSEQ=GT;MAPQ=60;MATEID=405776:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_74676001_74701001_21C;SPAN=7848;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:122:2.3:2.3,0,302.6:11:0:-2.018:20.63\n7\t74699096\t405780:1\tG\tG[7:74700246[\t0\tPASS\tEVDNC=ASSMB;HOMSEQ=GG;MAPQ=60;MATEID=405780:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_74676001_74701001_28C;SPAN=1150;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/0:6:143:20.2:0,20.2,399.3:6:0:20.39:9.202\n7\t74700246\t405780:2\tG\t]7:74699096]G\t0\tPASS\tEVDNC=ASSMB;HOMSEQ=GG;MAPQ=60;MATEID=405780:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_74676001_74701001_28C;SPAN=1150;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/0:6:143:20.2:0,20.2,399.3:6:0:20.39:9.202\n7\t75759979\t406698:1\tT\tT]7:101055231]\t21\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=406698:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:75759979(+)-7:101055231(+)__7_75754001_75779001D;SPAN=25295252;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:28:21.8:21.8,0,48.2:0:9:-21.84:22.4\n7\t76182048\t406928:1\tC\t[7:76200223[C\t51\tPASS\tDISC_MAPQ=57;EVDNC=ASDIS;INSERTION=AAATATAAACATTTGTCACAAGAGGTCTACTTCCTTTTGGATATTTTCACA;MAPQ=60;MATEID=406928:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_76195001_76220001_68C;SPAN=18175;SUBN=1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:20:51:51.8:51.8,0,74.9:18:6:-51.68:51.95\n7\t76200223\t406928:2\tT\t[7:76182048[T\t51\tPASS\tDISC_MAPQ=42;EVDNC=ASDIS;INSERTION=AAATATAAACATTTGTCACAAGAGGTCTACTTCCTTTTGGATATTTTCACA;MAPQ=60;MATEID=406928:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_76195001_76220001_68C;SPAN=18175;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:20:51:51.8:51.8,0,74.9:18:6:-51.68:51.95\n7\t76455113\t407277:1\tC\tC]7:76621893]\t36\tPASS\tDISC_MAPQ=28;EVDNC=DSCRD;IMPRECISE;MAPQ=28;MATEID=407277:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:76455113(+)-7:76621893(+)__7_76611501_76636501D;SPAN=166780;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:11:12:3.3:36.3,3.3,0:0:11:-35.86:35.86\n7\t76491075\t407182:1\tC\t]7:76989236]C\t17\tPASS\tDISC_MAPQ=16;EVDNC=DSCRD;IMPRECISE;MAPQ=16;MATEID=407182:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:76491075(-)-7:76989236(+)__7_76489001_76514001D;SPAN=498161;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:33:17.3:17.3,0,63.5:0:8:-17.13:18.75\n7\t76621893\t407277:2\tT\tT]7:76455113]\t36\tPASS\tDISC_MAPQ=44;EVDNC=DSCRD;IMPRECISE;MAPQ=44;MATEID=407277:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:76455113(+)-7:76621893(+)__7_76611501_76636501D;SPAN=166780;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:11:12:3.3:36.3,3.3,0:0:11:-35.86:35.86\n7\t76846695\t407388:2\tA\tA[1:83390671[\t16\tPASS\tDISC_MAPQ=38;EVDNC=DSCRD;IMPRECISE;MAPQ=38;MATEID=407388:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:83390671(-)-7:76846695(+)__7_76832001_76857001D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:35:16.7:16.7,0,69.5:0:8:-16.57:18.51\n7\t76847406\t407389:2\tC\t]1:83390908]C\t47\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=407389:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:83390908(+)-7:76847406(-)__7_76832001_76857001D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:17:32:30.8:47.3,0,30.8:0:17:-47.25:47.25\n7\t76882570\t407403:2\tC\tC[1:83426016[\t25\tPASS\tDISC_MAPQ=47;EVDNC=DSCRD;IMPRECISE;MAPQ=47;MATEID=407403:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:83426016(-)-7:76882570(+)__7_76881001_76906001D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:15:12.2:25.4,0,12.2:0:9:-25.74:25.74\n7\t76989236\t407182:2\tT\tT[7:76491075[\t17\tPASS\tDISC_MAPQ=17;EVDNC=DSCRD;IMPRECISE;MAPQ=17;MATEID=407182:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:76491075(-)-7:76989236(+)__7_76489001_76514001D;SPAN=498161;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:33:17.3:17.3,0,63.5:0:8:-17.13:18.75\n7\t77167731\t407669:1\tA\t[7:102703463[A\t9\tPASS\tDISC_MAPQ=47;EVDNC=DSCRD;IMPRECISE;MAPQ=47;MATEID=407669:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:77167731(-)-7:102703463(-)__7_77150501_77175501D;SPAN=25535732;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:59:9.8:9.8,0,138.5:0:8:-9.824:16.5\n7\t77647707\t407937:1\tA\tA[7:77648087[\t0\tPASS\tEVDNC=ASSMB;HOMSEQ=GTGGCTCAGGCCTGTAATCCCAGCATTTTGGGA;MAPQ=60;MATEID=407937:2;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_7_77640501_77665501_7C;SPAN=380;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/0:6:116:12.6:0,12.6,316.8:6:0:12.8:9.755\n7\t77648087\t407937:2\tG\t]7:77647707]G\t0\tPASS\tEVDNC=ASSMB;HOMSEQ=GTGGCTCAGGCCTGTAATCCCAGCATTTTGGGA;MAPQ=60;MATEID=407937:1;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_7_77640501_77665501_7C;SPAN=380;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/0:6:116:12.6:0,12.6,316.8:6:0:12.8:9.755\n7\t77743978\t407983:1\tG\tG[7:77744269[\t0\tPASS\tEVDNC=ASSMB;HOMSEQ=CAAGTGATCCTCCTGCCTTG;MAPQ=60;MATEID=407983:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_77738501_77763501_3C;SPAN=291;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/0:4:101:15:0,15,283.8:4:0:15.19:6.033\n7\t77744269\t407983:2\tC\t]7:77743978]C\t0\tPASS\tEVDNC=ASSMB;HOMSEQ=CAAGTGATCCTCCTGCCTTG;MAPQ=60;MATEID=407983:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_77738501_77763501_3C;SPAN=291;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/0:4:101:15:0,15,283.8:4:0:15.19:6.033\n7\t77744324\t407984:1\tC\tC[7:77744670[\t0\tPASS\tEVDNC=ASSMB;HOMSEQ=GGCCTCCCAAAGTGCTGGGATTACAGGTGTGAGCCAC;MAPQ=60;MATEID=407984:2;MATENM=0;NM=3;NUMPARTS=2;SCTG=c_7_77738501_77763501_34C;SPAN=346;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/0:5:92:9:0,9,247.5:5:0:9.356:8.239\n7\t77744670\t407984:2\tG\t]7:77744324]G\t0\tPASS\tEVDNC=ASSMB;HOMSEQ=GGCCTCCCAAAGTGCTGGGATTACAGGTGTGAGCCAC;MAPQ=60;MATEID=407984:1;MATENM=3;NM=0;NUMPARTS=2;SCTG=c_7_77738501_77763501_34C;SPAN=346;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/0:5:92:9:0,9,247.5:5:0:9.356:8.239\n7\t78728545\t408490:1\tT\tT[7:78728865[\t23\tPASS\tEVDNC=ASSMB;HOMSEQ=CCATCTTTCTCTGATCTTTTT;MAPQ=60;MATEID=408490:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_78718501_78743501_70C;SPAN=320;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:44:23.9:23.9,0,86.6:11:0:-23.94:25.95\n7\t78728865\t408490:2\tC\t]7:78728545]C\t23\tPASS\tEVDNC=ASSMB;HOMSEQ=CCATCTTTCTCTGATCTTTTT;MAPQ=60;MATEID=408490:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_78718501_78743501_70C;SPAN=320;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:44:23.9:23.9,0,86.6:11:0:-23.94:25.95\n7\t79125345\t412757:1\tG\tG[7:89181391[\t47\tPASS\tEVDNC=ASSMB;INSERTION=CCCACCAGTTGTTTCAGTGCTGTAG;MAPQ=60;MATEID=412757:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_7_89180001_89205001_22C;SPAN=10056046;SUBN=1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:17:31:27.8:47.6,0,27.8:17:0:-47.6:47.6\n7\t79131175\t408662:1\tC\t]20:54159808]C\t34\tPASS\tEVDNC=ASSMB;HOMSEQ=C;MAPQ=60;MATEID=408662:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_79110501_79135501_20C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:32:34.1:34.1,0,44:13:0:-33.92:34.03\n7\t79780343\t408962:1\tT\tT[7:79780659[\t0\tPASS\tEVDNC=ASSMB;INSERTION=TTGG;MAPQ=60;MATEID=408962:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_79772001_79797001_32C;SPAN=316;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/0:5:60:0.3:0,0.3,151.8:5:0:0.3605:9.196\n7\t79780659\t408962:2\tG\t]7:79780343]G\t0\tPASS\tEVDNC=ASSMB;INSERTION=TTGG;MAPQ=60;MATEID=408962:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_79772001_79797001_32C;SPAN=316;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/0:5:60:0.3:0,0.3,151.8:5:0:0.3605:9.196\n7\t80423705\t409225:1\tC\t[7:80603806[C\t99\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;INSERTION=ACAAATTGAATTGTAATT;MAPQ=60;MATEID=409225:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_80409001_80434001_4C;SPAN=180101;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:45:41:12.6:138.6,12.6,0:29:33:-138.6:138.6\n7\t80603145\t412890:1\tA\tA[7:89377687[\t31\tPASS\tEVDNC=ASSMB;INSERTION=A;MAPQ=60;MATEID=412890:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_89376001_89401001_13C;SPAN=8774542;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:28:31.7:31.7,0,38.3:12:0:-31.74:31.78\n7\t80603806\t409225:2\tA\t[7:80423705[A\t99\tPASS\tDISC_MAPQ=255;EVDNC=ASDIS;INSERTION=ACAAATTGAATTGTAATT;MAPQ=60;MATEID=409225:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_80409001_80434001_4C;SPAN=180101;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:45:41:12.6:138.6,12.6,0:29:33:-138.6:138.6\n7\t80607496\t409352:1\tG\t]7:80633495]G\t3\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=409352:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_80629501_80654501_61C;SPAN=25999;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:7:69:3.8:3.8,0,168.8:7:0:-3.712:13.5\n7\t80633495\t409352:2\tA\tA[7:80607496[\t3\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=409352:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_80629501_80654501_61C;SPAN=25999;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:7:69:3.8:3.8,0,168.8:7:0:-3.712:13.5\n7\t80708581\t409412:1\tA\tA[7:80710038[\t0\tPASS\tEVDNC=ASSMB;INSERTION=CACATATCTAT;MAPQ=60;MATEID=409412:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_80703001_80728001_87C;SPAN=1457;SUBN=1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/0:5:107:13.2:0,13.2,293.7:5:0:13.57:7.905\n7\t80710038\t409412:2\tA\t]7:80708581]A\t0\tPASS\tEVDNC=ASSMB;INSERTION=CACATATCTAT;MAPQ=60;MATEID=409412:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_80703001_80728001_87C;SPAN=1457;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/0:5:107:13.2:0,13.2,293.7:5:0:13.57:7.905\n7\t80914418\t409531:2\tT\t[5:43086248[T\t15\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=409531:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:43086248(-)-7:80914418(-)__7_80899001_80924001D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:63:15.5:15.5,0,140.9:0:10:-15.3:21.37\n7\t81172281\t409712:2\tT\tT]5:59692516]\t25\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=409712:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:59692516(+)-7:81172281(+)__7_81168501_81193501D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:40:25.1:25.1,0,74.6:0:11:-25.07:26.48\n7\t81172383\t409717:1\tG\tG[7:81172710[\t99\tPASS\tDISC_MAPQ=56;EVDNC=ASDIS;HOMSEQ=CCAGTTTCTT;MAPQ=60;MATEID=409717:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_7_81168501_81193501_5C;SPAN=327;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:66:31:18.3:201.3,18.3,0:48:21:-201.3:201.3\n7\t81172709\t409711:2\tA\t[5:59692316[A\t59\tPASS\tDISC_MAPQ=57;EVDNC=DSCRD;IMPRECISE;MAPQ=57;MATEID=409711:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:59692316(-)-7:81172709(-)__7_81168501_81193501D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:20:12:5.4:59.4,5.4,0:0:20:-59.41:59.41\n7\t81172710\t409717:2\tA\t]7:81172383]A\t99\tPASS\tDISC_MAPQ=57;EVDNC=ASDIS;HOMSEQ=CCAGTTTCTT;MAPQ=60;MATEID=409717:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_7_81168501_81193501_5C;SPAN=327;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:66:31:18.3:201.3,18.3,0:48:21:-201.3:201.3\n7\t81812267\t409937:1\tT\tT[7:81813154[\t92\tPASS\tDISC_MAPQ=58;EVDNC=DSCRD;IMPRECISE;MAPQ=58;MATEID=409937:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:81812267(+)-7:81813154(-)__7_81805501_81830501D;SPAN=887;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:28:31:8.4:92.4,8.4,0:0:28:-90.61:90.61\n7\t81813154\t409937:2\tA\t]7:81812267]A\t92\tPASS\tDISC_MAPQ=58;EVDNC=DSCRD;IMPRECISE;MAPQ=58;MATEID=409937:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:81812267(+)-7:81813154(-)__7_81805501_81830501D;SPAN=887;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:28:31:8.4:92.4,8.4,0:0:28:-90.61:90.61\n7\t82099424\t410047:1\tT\tT[7:82099749[\t99\tPASS\tEVDNC=ASSMB;HOMSEQ=GCAATACCTTCTT;MAPQ=60;MATEID=410047:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_82099501_82124501_74C;SPAN=325;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:34:22:9.3:102.3,9.3,0:34:0:-102.3:102.3\n7\t82099749\t410047:2\tG\t]7:82099424]G\t99\tPASS\tEVDNC=ASSMB;HOMSEQ=GCAATACCTTCTT;MAPQ=60;MATEID=410047:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_82099501_82124501_74C;SPAN=325;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:34:22:9.3:102.3,9.3,0:34:0:-102.3:102.3\n7\t82809484\t410398:1\tT\tT[7:83071482[\t19\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=410398:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:82809484(+)-7:83071482(-)__7_82785501_82810501D;SPAN=261998;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:37:19.4:19.4,0,72.2:0:9:-19.31:21.11\n7\t83071482\t410398:2\tC\t]7:82809484]C\t19\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=410398:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:82809484(+)-7:83071482(-)__7_82785501_82810501D;SPAN=261998;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:37:19.4:19.4,0,72.2:0:9:-19.31:21.11\n7\t84080562\t410862:1\tT\tT[7:84080872[\t99\tPASS\tEVDNC=ASSMB;HOMSEQ=GCAGCTTATAATTCTTT;MAPQ=60;MATEID=410862:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_84059501_84084501_52C;SPAN=310;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:46:31:12.6:138.6,12.6,0:46:0:-138.6:138.6\n7\t84080872\t410862:2\tG\t]7:84080562]G\t99\tPASS\tEVDNC=ASSMB;HOMSEQ=GCAGCTTATAATTCTTT;MAPQ=60;MATEID=410862:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_84059501_84084501_52C;SPAN=310;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:46:31:12.6:138.6,12.6,0:46:0:-138.6:138.6\n7\t85417192\t411352:1\tT\t]7:85451315]T\t21\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=411352:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:85417192(-)-7:85451315(+)__7_85431501_85456501D;SPAN=34123;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:30:21.2:21.2,0,54.2:0:9:-21.28:22.07\n7\t85451315\t411352:2\tA\tA[7:85417192[\t21\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=411352:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:85417192(-)-7:85451315(+)__7_85431501_85456501D;SPAN=34123;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:30:21.2:21.2,0,54.2:0:9:-21.28:22.07\n7\t87380246\t412124:1\tC\t]7:87380395]C\t66\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=412124:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_87367001_87392001_74C;SPAN=149;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:27:82:66.2:66.2,0,138.8:27:0:-66.08:67.55\n7\t87380395\t412124:2\tG\tG[7:87380246[\t66\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=412124:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_87367001_87392001_74C;SPAN=149;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:27:82:66.2:66.2,0,138.8:27:0:-66.08:67.55\n7\t89181391\t412757:2\tT\t]7:79125345]T\t47\tPASS\tEVDNC=ASSMB;INSERTION=CCCACCAGTTGTTTCAGTGCTGTAG;MAPQ=60;MATEID=412757:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_7_89180001_89205001_22C;SPAN=10056046;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:17:31:27.8:47.6,0,27.8:17:0:-47.6:47.6\n7\t89377687\t412890:2\tT\t]7:80603145]T\t31\tPASS\tEVDNC=ASSMB;INSERTION=A;MAPQ=60;MATEID=412890:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_89376001_89401001_13C;SPAN=8774542;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:28:31.7:31.7,0,38.3:12:0:-31.74:31.78\n7\t89969570\t413136:1\tT\tT[7:89969875[\t88\tPASS\tEVDNC=ASSMB;HOMSEQ=GACCTTATTCTT;MAPQ=60;MATEID=413136:2;MATENM=0;NM=5;NUMPARTS=2;SCTG=c_7_89964001_89989001_156C;SPAN=305;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:30:38:5.9:88.4,0,5.9:30:0:-92.39:92.39\n7\t89969875\t413136:2\tG\t]7:89969570]G\t88\tPASS\tEVDNC=ASSMB;HOMSEQ=GACCTTATTCTT;MAPQ=60;MATEID=413136:1;MATENM=5;NM=0;NUMPARTS=2;SCTG=c_7_89964001_89989001_156C;SPAN=305;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:30:38:5.9:88.4,0,5.9:30:0:-92.39:92.39\n7\t90181095\t413225:1\tC\tC[7:90183286[\t50\tPASS\tEVDNC=ASSMB;HOMSEQ=GC;MAPQ=60;MATEID=413225:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_90160001_90185001_65C;SPAN=2191;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:19:43:50.6:50.6,0,57.2:19:0:-50.63:50.66\n7\t90183286\t413225:2\tG\t]7:90181095]G\t50\tPASS\tEVDNC=ASSMB;HOMSEQ=GC;MAPQ=58;MATEID=413225:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_90160001_90185001_65C;SPAN=2191;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:19:43:50.6:50.6,0,57.2:19:0:-50.63:50.66\n7\t92838560\t414210:1\tC\tC]7:93538835]\t37\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=414210:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:92838560(+)-7:93538835(+)__7_92830501_92855501D;SPAN=700275;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:30:37.7:37.7,0,37.7:0:14:-37.78:37.78\n7\t93347523\t565388:1\tA\t]10:110418405]A\t72\tPASS\tDISC_MAPQ=20;EVDNC=ASDIS;MAPQ=60;MATEID=565388:2;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_10_110397001_110422001_54C;SPAN=-1;SUBN=5;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:24:12:6.6:72.6,6.6,0:14:15:-72.62:72.62\n7\t93538835\t414210:2\tT\tT]7:92838560]\t37\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=414210:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:92838560(+)-7:93538835(+)__7_92830501_92855501D;SPAN=700275;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:30:37.7:37.7,0,37.7:0:14:-37.78:37.78\n7\t93787629\t414547:1\tT\tT[7:93793680[\t69\tPASS\tEVDNC=ASSMB;HOMSEQ=TAATCATCATTCTT;MAPQ=60;MATEID=414547:2;MATENM=3;NM=4;NUMPARTS=2;SCTG=c_7_93786001_93811001_47C;SPAN=6051;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:23:17:6.3:69.3,6.3,0:23:0:-69.32:69.32\n7\t93793680\t414547:2\tT\t]7:93787629]T\t69\tPASS\tEVDNC=ASSMB;HOMSEQ=TAATCATCATTCTT;MAPQ=60;MATEID=414547:1;MATENM=4;NM=3;NUMPARTS=2;SCTG=c_7_93786001_93811001_47C;SPAN=6051;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:23:17:6.3:69.3,6.3,0:23:0:-69.32:69.32\n7\t93912504\t414574:1\tC\tC[7:93913228[\t37\tPASS\tDISC_MAPQ=36;EVDNC=ASDIS;INSERTION=CAA;MAPQ=60;MATEID=414574:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_93908501_93933501_70C;SPAN=724;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:19:8:37.7,0,8:6:11:-38.44:38.44\n7\t93913228\t414574:2\tT\t]7:93912504]T\t37\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;INSERTION=CAA;MAPQ=60;MATEID=414574:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_93908501_93933501_70C;SPAN=724;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:19:8:37.7,0,8:6:11:-38.44:38.44\n7\t94308706\t414626:1\tT\t]17:61570856]T\t24\tPASS\tEVDNC=ASSMB;INSERTION=GACTTGCTCT;MAPQ=60;MATEID=414626:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_94300501_94325501_8C;SPAN=-1;SUBN=3;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:18:18.2:24.8,0,18.2:9:0:-24.67:24.67\n7\t94467518\t461134:1\tA\t]8:86399769]A\t36\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AT;MAPQ=60;MATEID=461134:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_86387001_86412001_8C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:22:17:36.8,0,17:11:11:-37.05:37.05\n7\t95756956\t415049:1\tT\tT[7:95757273[\t99\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=CTCATTGGATTTGTT;MAPQ=60;MATEID=415049:2;MATENM=4;NM=1;NUMPARTS=2;SCTG=c_7_95746001_95771001_72C;SPAN=317;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:53:25:14.7:161.7,14.7,0:40:18:-161.7:161.7\n7\t95757273\t415049:2\tC\t]7:95756956]C\t99\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=CTCATTGGATTTGTT;MAPQ=60;MATEID=415049:1;MATENM=1;NM=4;NUMPARTS=2;SCTG=c_7_95746001_95771001_72C;SPAN=317;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:53:25:14.7:161.7,14.7,0:40:18:-161.7:161.7\n7\t96846589\t415398:1\tC\tC[7:96852683[\t92\tPASS\tEVDNC=ASSMB;HOMSEQ=GCAACTGGAACTTTC;MAPQ=60;MATEID=415398:2;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_7_96848501_96873501_26C;SPAN=6094;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:30:25:8.4:92.4,8.4,0:30:0:-92.42:92.42\n7\t96852683\t415398:2\tG\t]7:96846589]G\t92\tPASS\tEVDNC=ASSMB;HOMSEQ=GCAACTGGAACTTTC;MAPQ=60;MATEID=415398:1;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_7_96848501_96873501_26C;SPAN=6094;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:30:25:8.4:92.4,8.4,0:30:0:-92.42:92.42\n7\t97260359\t415757:1\tA\tA[7:97999493[\t46\tPASS\tEVDNC=ASSMB;INSERTION=A;MAPQ=44;MATEID=415757:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_97975501_98000501_51C;SPAN=739134;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:15:12:4.2:46.2,4.2,0:15:0:-46.21:46.21\n7\t97265435\t415571:1\tT\tT[7:97265662[\t69\tPASS\tEVDNC=ASSMB;HOMSEQ=AAAAACCTCAGTCCTT;MAPQ=60;MATEID=415571:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_97265001_97290001_19C;SPAN=227;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:23:18:6.3:69.3,6.3,0:23:0:-69.32:69.32\n7\t97265662\t415571:2\tA\t]7:97265435]A\t69\tPASS\tEVDNC=ASSMB;HOMSEQ=AAAAACCTCAGTCCTT;MAPQ=60;MATEID=415571:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_97265001_97290001_19C;SPAN=227;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:23:18:6.3:69.3,6.3,0:23:0:-69.32:69.32\n7\t97805476\t415701:1\tC\tC[7:97806091[\t75\tPASS\tDISC_MAPQ=59;EVDNC=ASDIS;HOMSEQ=AGGAGAATCCCTTGAACCCGGGAGGC;MAPQ=60;MATEID=415701:2;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_7_97804001_97829001_6C;SPAN=615;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:25:17:6.9:75.9,6.9,0:17:18:-75.92:75.92\n7\t97806091\t415701:2\tA\t]7:97805476]A\t75\tPASS\tDISC_MAPQ=47;EVDNC=ASDIS;HOMSEQ=AGGAGAATCCCTTGAACCCGGGAGGC;MAPQ=60;MATEID=415701:1;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_7_97804001_97829001_6C;SPAN=615;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:25:17:6.9:75.9,6.9,0:17:18:-75.92:75.92\n7\t97999493\t415757:2\tA\t]7:97260359]A\t46\tPASS\tEVDNC=ASSMB;INSERTION=A;MAPQ=60;MATEID=415757:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_97975501_98000501_51C;SPAN=739134;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:15:12:4.2:46.2,4.2,0:15:0:-46.21:46.21\n7\t98344850\t62784:2\tC\tC]1:232116541]\t46\tPASS\tDISC_MAPQ=9;EVDNC=ASDIS;HOMSEQ=GATTCTCCTGCCTCA;MAPQ=35;MATEID=62784:1;MATENM=3;NM=3;NUMPARTS=2;SCTG=c_1_232113001_232138001_17C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:16:10:4.2:46.2,4.2,0:14:2:-46.21:46.21\n7\t98547954\t416031:1\tA\t]7:98548572]A\t64\tPASS\tDISC_MAPQ=49;EVDNC=DSCRD;IMPRECISE;MAPQ=49;MATEID=416031:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:98547954(-)-7:98548572(+)__7_98539001_98564001D;SPAN=618;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:24:53:64.4:64.4,0,67.7:0:24:-64.33:64.34\n7\t98548572\t416031:2\tC\tC[7:98547954[\t64\tPASS\tDISC_MAPQ=41;EVDNC=DSCRD;IMPRECISE;MAPQ=41;MATEID=416031:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:98547954(-)-7:98548572(+)__7_98539001_98564001D;SPAN=618;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:24:53:64.4:64.4,0,67.7:0:24:-64.33:64.34\n7\t100458672\t426184:1\tT\t]7:129517338]T\t52\tPASS\tDISC_MAPQ=255;EVDNC=TSI_G;HOMSEQ=TCCCAGCACTTTGGGAGGCCGAGG;INSERTION=CCAGGTGCAGTGGCTCACACCTGTAT;MAPQ=17;MATEID=426184:2;MATENM=0;NM=1;NUMPARTS=3;SCTG=c_7_129507001_129532001_32C;SPAN=29058666;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:18:11:4.8:52.8,4.8,0:18:0:-52.81:52.81\n7\t100470421\t416704:2\tA\t[1:228154057[A\t79\tPASS\tDISC_MAPQ=56;EVDNC=ASDIS;HOMSEQ=AGC;MAPQ=60;MATEID=416704:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_100450001_100475001_20C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:26:15:7.2:79.2,7.2,0:14:19:-79.22:79.22\n7\t100658692\t62042:2\tG\t]1:228212126]G\t20\tPASS\tEVDNC=ASSMB;INSERTION=TGGAGGGTTTGGGAGCCTGTCCA;MAPQ=60;MATEID=62042:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_1_228193001_228218001_63C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:21:20.6:20.6,0,30.5:8:0:-20.51:20.65\n7\t100729963\t416768:1\tT\tT[7:100743094[\t93\tPASS\tDISC_MAPQ=54;EVDNC=ASDIS;HOMSEQ=GCTCACTGCAACCT;MAPQ=60;MATEID=416768:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_100719501_100744501_39C;SPAN=13131;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:32:44:17.3:93.2,0,17.3:23:15:-96.2:96.2\n7\t100743094\t416768:2\tG\t]7:100729963]G\t93\tPASS\tDISC_MAPQ=58;EVDNC=ASDIS;HOMSEQ=GCTCACTGCAACCT;MAPQ=60;MATEID=416768:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_100719501_100744501_39C;SPAN=13131;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:32:44:17.3:93.2,0,17.3:23:15:-96.2:96.2\n7\t100770427\t416800:1\tC\t[7:100773213[C\t8\tPASS\tDISC_MAPQ=45;EVDNC=ASDIS;HOMSEQ=AG;MAPQ=60;MATEID=416800:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_100768501_100793501_79C;SPAN=2786;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:66:8:8,0,156.5:6:7:-7.856:16.09\n7\t100773213\t416800:2\tA\t[7:100770427[A\t8\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AG;MAPQ=60;MATEID=416800:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_100768501_100793501_79C;SPAN=2786;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:66:8:8,0,156.5:6:7:-7.856:16.09\n7\t100788247\t416796:2\tG\tG[7:57352716[\t23\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=416796:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:57352716(-)-7:100788247(+)__7_100768501_100793501D;SPAN=43435531;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:34:23.6:23.6,0,59.9:0:10:-23.45:24.42\n7\t100804168\t416828:1\tT\tT[7:100804454[\t0\tPASS\tEVDNC=ASSMB;HOMSEQ=ACAGGCACGCACCACCATGCCCAGCTAATTTTT;MAPQ=60;MATEID=416828:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_100793001_100818001_64C;SPAN=286;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/0:4:60:3.6:0,3.6,158.4:4:0:3.662:6.956\n7\t100804454\t416828:2\tA\t]7:100804168]A\t0\tPASS\tEVDNC=ASSMB;HOMSEQ=ACAGGCACGCACCACCATGCCCAGCTAATTTTT;MAPQ=60;MATEID=416828:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_100793001_100818001_64C;SPAN=286;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/0:4:60:3.6:0,3.6,158.4:4:0:3.662:6.956\n7\t100867063\t417117:1\tG\tG[7:101077595[\t42\tPASS\tEVDNC=ASSMB;INSERTION=GACTAATTCC;MAPQ=60;MATEID=417117:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_101062501_101087501_16C;SPAN=210532;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:15:26:22.4:42.2,0,22.4:15:0:-42.5:42.5\n7\t100961967\t417018:1\tT\tT[7:100962263[\t63\tPASS\tEVDNC=ASSMB;HOMSEQ=AAAAACTTACCT;MAPQ=60;MATEID=417018:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_7_100940001_100965001_355C;SPAN=296;SUBN=1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:23:45:50:63.2,0,50:23:0:-63.36:63.36\n7\t100962263\t417018:2\tA\t]7:100961967]A\t63\tPASS\tEVDNC=ASSMB;HOMSEQ=AAAAACTTACCT;MAPQ=60;MATEID=417018:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_7_100940001_100965001_355C;SPAN=296;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:23:45:50:63.2,0,50:23:0:-63.36:63.36\n7\t101055231\t406698:2\tA\tA]7:75759979]\t21\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=406698:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:75759979(+)-7:101055231(+)__7_75754001_75779001D;SPAN=25295252;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:28:21.8:21.8,0,48.2:0:9:-21.84:22.4\n7\t101077595\t417117:2\tC\t]7:100867063]C\t42\tPASS\tEVDNC=ASSMB;INSERTION=GACTAATTCC;MAPQ=60;MATEID=417117:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_101062501_101087501_16C;SPAN=210532;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:15:26:22.4:42.2,0,22.4:15:0:-42.5:42.5\n7\t101357985\t417375:1\tT\tT[7:101360515[\t99\tPASS\tEVDNC=ASSMB;HOMSEQ=CCAATTTTTGTATTTTT;MAPQ=60;MATEID=417375:2;MATENM=5;NM=0;NUMPARTS=2;SCTG=c_7_101356501_101381501_58C;SPAN=2530;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:35:42:1.4:103.7,0,1.4:35:0:-109.7:109.7\n7\t101360515\t417375:2\tC\t]7:101357985]C\t99\tPASS\tEVDNC=ASSMB;HOMSEQ=CCAATTTTTGTATTTTT;MAPQ=60;MATEID=417375:1;MATENM=0;NM=5;NUMPARTS=2;SCTG=c_7_101356501_101381501_58C;SPAN=2530;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:35:42:1.4:103.7,0,1.4:35:0:-109.7:109.7\n7\t101415969\t417445:1\tT\tT[7:101416963[\t70\tPASS\tDISC_MAPQ=57;EVDNC=DSCRD;IMPRECISE;MAPQ=57;MATEID=417445:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:101415969(+)-7:101416963(-)__7_101405501_101430501D;SPAN=994;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:25:44:40.4:70.1,0,40.4:0:25:-70.58:70.58\n7\t101416963\t417445:2\tA\t]7:101415969]A\t70\tPASS\tDISC_MAPQ=59;EVDNC=DSCRD;IMPRECISE;MAPQ=59;MATEID=417445:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:101415969(+)-7:101416963(-)__7_101405501_101430501D;SPAN=994;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:25:44:40.4:70.1,0,40.4:0:25:-70.58:70.58\n7\t101463616\t400347:2\tT\tT]7:65398431]\t58\tPASS\tDISC_MAPQ=57;EVDNC=DSCRD;IMPRECISE;MAPQ=57;MATEID=400347:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:65398431(+)-7:101463616(+)__7_65390501_65415501D;SPAN=36065185;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:20:27:8.9:58.4,0,8.9:0:20:-60.44:60.44\n7\t101690931\t417617:1\tT\tT[7:101691236[\t46\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=CACCTGGCTCATTTTT;MAPQ=60;MATEID=417617:2;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_7_101675001_101700001_67C;SPAN=305;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:16:8:4.2:46.2,4.2,0:12:7:-46.21:46.21\n7\t101691236\t417617:2\tC\t]7:101690931]C\t46\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=CACCTGGCTCATTTTT;MAPQ=60;MATEID=417617:1;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_7_101675001_101700001_67C;SPAN=305;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:16:8:4.2:46.2,4.2,0:12:7:-46.21:46.21\n7\t102703463\t407669:2\tT\t[7:77167731[T\t9\tPASS\tDISC_MAPQ=55;EVDNC=DSCRD;IMPRECISE;MAPQ=55;MATEID=407669:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:77167731(-)-7:102703463(-)__7_77150501_77175501D;SPAN=25535732;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:59:9.8:9.8,0,138.5:0:8:-9.824:16.5\n7\t102848273\t418158:1\tG\tG[7:102848597[\t0\tPASS\tEVDNC=ASSMB;HOMSEQ=AAAAAATACACATTCG;MAPQ=60;MATEID=418158:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_102826501_102851501_41C;SPAN=324;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/0:7:84:0.3:0,0.3,211.2:7:0:0.5047:12.88\n7\t102848597\t418158:2\tA\t]7:102848273]A\t0\tPASS\tEVDNC=ASSMB;HOMSEQ=AAAAAATACACATTCG;MAPQ=60;MATEID=418158:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_102826501_102851501_41C;SPAN=324;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/0:7:84:0.3:0,0.3,211.2:7:0:0.5047:12.88\n7\t104489080\t418722:1\tT\tT[7:104489349[\t82\tPASS\tEVDNC=ASSMB;HOMSEQ=GTGCTGAAATCTT;MAPQ=60;MATEID=418722:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_104468001_104493001_3C;SPAN=269;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:27:24:7.5:82.5,7.5,0:27:0:-82.52:82.52\n7\t104489349\t418722:2\tG\t]7:104489080]G\t82\tPASS\tEVDNC=ASSMB;HOMSEQ=GTGCTGAAATCTT;MAPQ=60;MATEID=418722:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_104468001_104493001_3C;SPAN=269;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:27:24:7.5:82.5,7.5,0:27:0:-82.52:82.52\n7\t104546954\t418744:1\tA\tA[7:104547269[\t59\tPASS\tEVDNC=ASSMB;HOMSEQ=AAGAAATAGTAGCTCAA;MAPQ=60;MATEID=418744:2;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_7_104541501_104566501_49C;SPAN=315;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:18:20:5.4:59.4,5.4,0:18:0:-58.15:58.15\n7\t104547269\t418744:2\tA\t]7:104546954]A\t59\tPASS\tEVDNC=ASSMB;HOMSEQ=AAGAAATAGTAGCTCAA;MAPQ=60;MATEID=418744:1;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_7_104541501_104566501_49C;SPAN=315;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:18:20:5.4:59.4,5.4,0:18:0:-58.15:58.15\n7\t105520479\t419121:1\tG\t[7:105521175[G\t8\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=GAGGC;MAPQ=60;MATEID=419121:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_7_105497001_105522001_197C;SPAN=696;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:6:39:8.9:8.9,0,88.1:5:3:-8.844:12.73\n7\t105521175\t419121:2\tG\t[7:105520479[G\t8\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=GAGGC;MAPQ=60;MATEID=419121:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_7_105497001_105522001_197C;SPAN=696;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:6:39:8.9:8.9,0,88.1:5:3:-8.844:12.73\n7\t106074072\t419438:1\tC\t]7:106208676]C\t48\tPASS\tDISC_MAPQ=53;EVDNC=TSI_L;INSERTION=TA;MAPQ=60;MATEID=419438:2;MATENM=0;NM=1;NUMPARTS=3;SCTG=c_7_106207501_106232501_21C;SPAN=134604;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:17:26:15.8:48.8,0,15.8:13:9:-49.68:49.68\n7\t106074178\t419439:1\tC\tC[7:106081493[\t46\tPASS\tDISC_MAPQ=255;EVDNC=TSI_L;HOMSEQ=TCACC;INSERTION=TA;MAPQ=60;MATEID=419439:2;MATENM=1;NM=1;NUMPARTS=3;REPSEQ=CC;SCTG=c_7_106207501_106232501_21C;SPAN=7315;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:15:0:4.2:46.2,4.2,0:15:0:-46.21:46.21\n7\t106081493\t419441:1\tT\t]7:106208676]T\t55\tPASS\tDISC_MAPQ=255;EVDNC=TSI_G;HOMSEQ=TCACC;INSERTION=TACCATTGGACAGCCATACTCCAGGGAAAGGTCATTTTCCCACTCCATCCGCTTTCCGGCTCCCTGCTGACAGCCACCTCCACCACTCAATAAAACCCCCACAT;MAPQ=60;MATEID=419441:2;MATENM=0;NM=1;NUMPARTS=3;SCTG=c_7_106207501_106232501_21C;SPAN=127183;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:19:26:9.2:55.4,0,9.2:19:0:-57.2:57.2\n7\t106081493\t419439:2\tT\t]7:106074178]T\t46\tPASS\tDISC_MAPQ=255;EVDNC=TSI_L;HOMSEQ=TCACC;INSERTION=TA;MAPQ=60;MATEID=419439:1;MATENM=1;NM=1;NUMPARTS=3;REPSEQ=CC;SCTG=c_7_106207501_106232501_21C;SPAN=7315;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:15:0:4.2:46.2,4.2,0:15:0:-46.21:46.21\n7\t106093547\t419392:1\tC\tC[7:106093883[\t80\tPASS\tEVDNC=ASSMB;HOMSEQ=CAC;MAPQ=60;MATEID=419392:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_106085001_106110001_69C;SPAN=336;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:28:41:21.5:80.9,0,21.5:28:0:-82.75:82.75\n7\t106093883\t419392:2\tC\t]7:106093547]C\t80\tPASS\tEVDNC=ASSMB;HOMSEQ=CAC;MAPQ=60;MATEID=419392:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_106085001_106110001_69C;SPAN=336;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:28:41:21.5:80.9,0,21.5:28:0:-82.75:82.75\n7\t106208676\t419441:2\tT\tT[7:106081493[\t55\tPASS\tDISC_MAPQ=255;EVDNC=TSI_G;HOMSEQ=TCACC;INSERTION=TACCATTGGACAGCCATACTCCAGGGAAAGGTCATTTTCCCACTCCATCCGCTTTCCGGCTCCCTGCTGACAGCCACCTCCACCACTCAATAAAACCCCCACAT;MAPQ=60;MATEID=419441:1;MATENM=1;NM=0;NUMPARTS=3;SCTG=c_7_106207501_106232501_21C;SPAN=127183;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:19:26:9.2:55.4,0,9.2:19:0:-57.2:57.2\n7\t106208676\t419438:2\tT\tT[7:106074072[\t48\tPASS\tDISC_MAPQ=60;EVDNC=TSI_L;INSERTION=TA;MAPQ=60;MATEID=419438:1;MATENM=1;NM=0;NUMPARTS=3;SCTG=c_7_106207501_106232501_21C;SPAN=134604;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:17:26:15.8:48.8,0,15.8:13:9:-49.68:49.68\n7\t107823624\t419930:1\tA\tA[7:107824295[\t95\tPASS\tEVDNC=ASSMB;HOMSEQ=GA;MAPQ=60;MATEID=419930:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_107800001_107825001_4C;SPAN=671;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:32:25:8.7:95.7,8.7,0:32:0:-95.72:95.72\n7\t107824295\t419930:2\tG\t]7:107823624]G\t95\tPASS\tEVDNC=ASSMB;HOMSEQ=GA;MAPQ=60;MATEID=419930:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_107800001_107825001_4C;SPAN=671;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:32:25:8.7:95.7,8.7,0:32:0:-95.72:95.72\n7\t108712413\t420213:1\tA\tA[7:108712728[\t7\tPASS\tEVDNC=ASSMB;HOMSEQ=AAGAGGAAAGA;MAPQ=60;MATEID=420213:2;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_7_108706501_108731501_59C;SPAN=315;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:4:21:7.4:7.4,0,43.7:4:0:-7.301:8.898\n7\t108712728\t420213:2\tA\t]7:108712413]A\t7\tPASS\tEVDNC=ASSMB;HOMSEQ=AAGAGGAAAGA;MAPQ=60;MATEID=420213:1;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_7_108706501_108731501_59C;SPAN=315;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:4:21:7.4:7.4,0,43.7:4:0:-7.301:8.898\n7\t109796632\t420517:1\tT\tT[7:109813845[\t99\tPASS\tDISC_MAPQ=57;EVDNC=ASDIS;INSERTION=TG;MAPQ=60;MATEID=420517:2;MATENM=8;NM=5;NUMPARTS=2;SCTG=c_7_109809001_109834001_9C;SPAN=17213;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:49:9:13.5:148.5,13.5,0:27:35:-148.5:148.5\n7\t109813845\t420517:2\tT\t]7:109796632]T\t99\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;INSERTION=TG;MAPQ=60;MATEID=420517:1;MATENM=5;NM=8;NUMPARTS=2;SCTG=c_7_109809001_109834001_9C;SPAN=17213;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:49:9:13.5:148.5,13.5,0:27:35:-148.5:148.5\n7\t110541911\t420747:1\tT\tT[7:110548376[\t19\tPASS\tEVDNC=ASSMB;HOMSEQ=TCT;MAPQ=60;MATEID=420747:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_110544001_110569001_88C;SPAN=6465;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:7:7:1.8:19.8,1.8,0:7:0:-19.8:19.8\n7\t110548376\t420747:2\tT\t]7:110541911]T\t19\tPASS\tEVDNC=ASSMB;HOMSEQ=TCT;MAPQ=60;MATEID=420747:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_110544001_110569001_88C;SPAN=6465;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:7:7:1.8:19.8,1.8,0:7:0:-19.8:19.8\n7\t111002957\t420853:1\tA\tA[7:111065631[\t20\tPASS\tEVDNC=ASSMB;HOMSEQ=A;MAPQ=60;MATEID=420853:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_111058501_111083501_11C;SPAN=62674;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:7:10:3.8:20.3,0,3.8:7:0:-20.82:20.82\n7\t111065631\t420853:2\tA\t]7:111002957]A\t20\tPASS\tEVDNC=ASSMB;HOMSEQ=A;MAPQ=60;MATEID=420853:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_111058501_111083501_11C;SPAN=62674;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:7:10:3.8:20.3,0,3.8:7:0:-20.82:20.82\n7\t111077514\t420873:1\tG\tG[7:111178811[\t29\tPASS\tEVDNC=ASSMB;HOMSEQ=TAG;MAPQ=60;MATEID=420873:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_111156501_111181501_10C;SPAN=101297;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:13:2.9:29.3,0,2.9:10:0:-30.55:30.55\n7\t111113982\t420868:1\tA\tA[7:111115536[\t32\tPASS\tEVDNC=ASSMB;INSERTION=TAAAGAGAGTGTAAA;MAPQ=60;MATEID=420868:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_111107501_111132501_10C;SPAN=1554;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:14:2.6:32.3,0,2.6:11:0:-33.83:33.83\n7\t111115536\t420868:2\tT\t]7:111113982]T\t32\tPASS\tEVDNC=ASSMB;INSERTION=TAAAGAGAGTGTAAA;MAPQ=60;MATEID=420868:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_111107501_111132501_10C;SPAN=1554;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:14:2.6:32.3,0,2.6:11:0:-33.83:33.83\n7\t111178811\t420873:2\tT\t]7:111077514]T\t29\tPASS\tEVDNC=ASSMB;HOMSEQ=TAG;MAPQ=60;MATEID=420873:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_111156501_111181501_10C;SPAN=101297;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:13:2.9:29.3,0,2.9:10:0:-30.55:30.55\n7\t111413698\t420918:1\tA\tA[12:107809482[\t75\tPASS\tEVDNC=ASSMB;HOMSEQ=AA;MAPQ=60;MATEID=420918:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_7_111401501_111426501_27C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:25:22:6.9:75.9,6.9,0:25:0:-75.92:75.92\n7\t111682701\t916278:1\tG\t]22:28669482]G\t0\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=GT;MAPQ=60;MATEID=916278:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_22_28665001_28690001_206C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/0:7:102:5.4:0,5.4,267.3:7:2:5.564:12.26\n7\t113776121\t421472:1\tT\tT[7:113782153[\t75\tPASS\tEVDNC=ASSMB;HOMSEQ=CATAATGGCATTTTT;MAPQ=60;MATEID=421472:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_113778001_113803001_26C;SPAN=6032;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:25:12:6.9:75.9,6.9,0:25:0:-75.92:75.92\n7\t113782153\t421472:2\tC\t]7:113776121]C\t75\tPASS\tEVDNC=ASSMB;HOMSEQ=CATAATGGCATTTTT;MAPQ=60;MATEID=421472:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_113778001_113803001_26C;SPAN=6032;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:25:12:6.9:75.9,6.9,0:25:0:-75.92:75.92\n7\t114313463\t421622:1\tC\tC[7:114313759[\t23\tPASS\tEVDNC=ASSMB;HOMSEQ=AAAACAAAAATATTGTC;MAPQ=60;MATEID=421622:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_114292501_114317501_13C;SPAN=296;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:23:23.3:23.3,0,33.2:9:0:-23.24:23.37\n7\t114313759\t421622:2\tA\t]7:114313463]A\t23\tPASS\tEVDNC=ASSMB;HOMSEQ=AAAACAAAAATATTGTC;MAPQ=60;MATEID=421622:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_114292501_114317501_13C;SPAN=296;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:23:23.3:23.3,0,33.2:9:0:-23.24:23.37\n7\t117201963\t422406:1\tT\tT[7:117202261[\t72\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=CTCGAAGCTATCTT;MAPQ=60;MATEID=422406:2;MATENM=0;NM=3;NUMPARTS=2;SCTG=c_7_117183501_117208501_4C;SPAN=298;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:24:15:6.6:72.6,6.6,0:13:12:-72.62:72.62\n7\t117202261\t422406:2\tC\t]7:117201963]C\t72\tPASS\tDISC_MAPQ=59;EVDNC=ASDIS;HOMSEQ=CTCGAAGCTATCTT;MAPQ=60;MATEID=422406:1;MATENM=3;NM=0;NUMPARTS=2;SCTG=c_7_117183501_117208501_4C;SPAN=298;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:24:15:6.6:72.6,6.6,0:13:12:-72.62:72.62\n7\t118253913\t422590:1\tC\tC[7:118254199[\t46\tPASS\tEVDNC=ASSMB;HOMSEQ=CATCCTTGTGTATTTTC;MAPQ=60;MATEID=422590:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_118237001_118262001_43C;SPAN=286;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:14:15:4.2:46.2,4.2,0:14:0:-46.19:46.19\n7\t118254199\t422590:2\tC\t]7:118253913]C\t46\tPASS\tEVDNC=ASSMB;HOMSEQ=CATCCTTGTGTATTTTC;MAPQ=60;MATEID=422590:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_118237001_118262001_43C;SPAN=286;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:14:15:4.2:46.2,4.2,0:14:0:-46.19:46.19\n7\t119191314\t422887:1\tA\tA[7:119194700[\t92\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=422887:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:119191314(+)-7:119194700(-)__7_119192501_119217501D;SPAN=3386;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:30:7:8.4:92.4,8.4,0:0:30:-92.42:92.42\n7\t119194700\t422887:2\tG\t]7:119191314]G\t92\tPASS\tDISC_MAPQ=58;EVDNC=DSCRD;IMPRECISE;MAPQ=58;MATEID=422887:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:119191314(+)-7:119194700(-)__7_119192501_119217501D;SPAN=3386;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:30:7:8.4:92.4,8.4,0:0:30:-92.42:92.42\n7\t120983381\t423222:2\tC\tC[6:70153588[\t29\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=423222:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:70153588(-)-7:120983381(+)__7_120981001_121006001D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:10:7:2.7:29.7,2.7,0:0:10:-29.71:29.71\n7\t121241062\t423316:1\tG\tG[7:121241381[\t64\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AAAAAGAAATTATAAAACAG;MAPQ=60;MATEID=423316:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_121226001_121251001_119C;SPAN=319;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:22:29:8.3:64.4,0,8.3:18:7:-66.94:66.94\n7\t121241381\t423316:2\tA\t]7:121241062]A\t64\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AAAAAGAAATTATAAAACAG;MAPQ=60;MATEID=423316:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_121226001_121251001_119C;SPAN=319;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:22:29:8.3:64.4,0,8.3:18:7:-66.94:66.94\n7\t121522363\t423406:1\tC\t[7:121522547[C\t26\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=423406:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:121522363(-)-7:121522547(-)__7_121520001_121545001D;SPAN=184;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:22:26.9:26.9,0,26.9:0:10:-26.83:26.83\n7\t121522547\t423406:2\tA\t[7:121522363[A\t26\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=423406:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:121522363(-)-7:121522547(-)__7_121520001_121545001D;SPAN=184;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:22:26.9:26.9,0,26.9:0:10:-26.83:26.83\n7\t122571822\t423890:1\tT\tT[7:122796082[\t46\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=423890:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_122794001_122819001_30C;SPAN=224260;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:16:13:4.2:46.2,4.2,0:16:0:-46.21:46.21\n7\t122796082\t423890:2\tG\t]7:122571822]G\t46\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=423890:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_122794001_122819001_30C;SPAN=224260;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:16:13:4.2:46.2,4.2,0:16:0:-46.21:46.21\n7\t123137650\t424046:1\tG\t]7:123249081]G\t18\tPASS\tEVDNC=ASSMB;INSERTION=CCCGGAAGGT;MAPQ=60;MATEID=424046:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_7_123235001_123260001_45C;SPAN=111431;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:7:18:18.2:18.2,0,24.8:7:0:-18.05:18.15\n7\t123249081\t424046:2\tA\tA[7:123137650[\t18\tPASS\tEVDNC=ASSMB;INSERTION=CCCGGAAGGT;MAPQ=60;MATEID=424046:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_7_123235001_123260001_45C;SPAN=111431;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:7:18:18.2:18.2,0,24.8:7:0:-18.05:18.15\n7\t123280266\t424085:1\tA\t]7:123375157]A\t25\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=424085:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:123280266(-)-7:123375157(+)__7_123357501_123382501D;SPAN=94891;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:17:15.2:25.1,0,15.2:0:9:-24.99:24.99\n7\t123375157\t424085:2\tC\tC[7:123280266[\t25\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=424085:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:123280266(-)-7:123375157(+)__7_123357501_123382501D;SPAN=94891;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:17:15.2:25.1,0,15.2:0:9:-24.99:24.99\n7\t125624166\t634200:1\tC\tC[12:73620587[\t75\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;INSERTION=ATTATA;MAPQ=60;MATEID=634200:2;MATENM=0;NM=8;NUMPARTS=2;SCTG=c_12_73598001_73623001_3C;SPAN=-1;SUBN=3;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:25:24:6.9:75.9,6.9,0:24:7:-75.92:75.92\n7\t126105456\t425065:1\tG\t]7:126150623]G\t18\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=425065:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_126150501_126175501_8C;SPAN=45167;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:7:18:18.2:18.2,0,24.8:7:0:-18.05:18.15\n7\t126150623\t425065:2\tT\tT[7:126105456[\t18\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=425065:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_126150501_126175501_8C;SPAN=45167;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:7:18:18.2:18.2,0,24.8:7:0:-18.05:18.15\n7\t128126376\t425599:1\tT\tT[7:128126677[\t59\tPASS\tEVDNC=ASSMB;HOMSEQ=GGGCACAGCATCTT;MAPQ=60;MATEID=425599:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_128110501_128135501_5C;SPAN=301;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:20:16:5.4:59.4,5.4,0:20:0:-59.41:59.41\n7\t128126677\t425599:2\tG\t]7:128126376]G\t59\tPASS\tEVDNC=ASSMB;HOMSEQ=GGGCACAGCATCTT;MAPQ=60;MATEID=425599:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_128110501_128135501_5C;SPAN=301;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:20:16:5.4:59.4,5.4,0:20:0:-59.41:59.41\n7\t128669172\t425900:1\tT\tT[7:128669476[\t41\tPASS\tEVDNC=ASSMB;HOMSEQ=TGAACACCAGCTCTT;MAPQ=60;MATEID=425900:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_128649501_128674501_79C;SPAN=304;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:18:1.7:41.3,0,1.7:14:0:-42.92:42.92\n7\t128669476\t425900:2\tT\t]7:128669172]T\t41\tPASS\tEVDNC=ASSMB;HOMSEQ=TGAACACCAGCTCTT;MAPQ=60;MATEID=425900:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_128649501_128674501_79C;SPAN=304;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:18:1.7:41.3,0,1.7:14:0:-42.92:42.92\n7\t129202957\t426099:1\tC\tC[7:129204303[\t23\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AGC;MAPQ=60;MATEID=426099:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_129188501_129213501_47C;SPAN=1346;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:23:23.3:23.3,0,33.2:5:8:-23.24:23.37\n7\t129204303\t426099:2\tA\t]7:129202957]A\t23\tPASS\tDISC_MAPQ=59;EVDNC=ASDIS;HOMSEQ=AGC;MAPQ=60;MATEID=426099:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_129188501_129213501_47C;SPAN=1346;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:23:23.3:23.3,0,33.2:5:8:-23.24:23.37\n7\t129517338\t426184:2\tG\tG[7:100458672[\t52\tPASS\tDISC_MAPQ=255;EVDNC=TSI_G;HOMSEQ=TCCCAGCACTTTGGGAGGCCGAGG;INSERTION=CCAGGTGCAGTGGCTCACACCTGTAT;MAPQ=60;MATEID=426184:1;MATENM=1;NM=0;NUMPARTS=3;SCTG=c_7_129507001_129532001_32C;SPAN=29058666;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:18:11:4.8:52.8,4.8,0:18:0:-52.81:52.81\n7\t131224139\t426882:1\tA\t]7:131224307]A\t18\tPASS\tEVDNC=ASSMB;HOMSEQ=ACCTGTAATCCCAGCACTTTGGGA;MAPQ=60;MATEID=426882:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_131222001_131247001_28C;SPAN=168;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:40:18.5:18.5,0,81.2:9:0:-18.47:20.76\n7\t131224307\t426882:2\tA\tA[7:131224139[\t18\tPASS\tEVDNC=ASSMB;HOMSEQ=ACCTGTAATCCCAGCACTTTGGGA;MAPQ=60;MATEID=426882:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_131222001_131247001_28C;SPAN=168;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:40:18.5:18.5,0,81.2:9:0:-18.47:20.76\n7\t133151419\t427472:1\tT\tT[7:133151590[\t8\tPASS\tEVDNC=ASSMB;INSERTION=CAGGGCCACA;MAPQ=60;MATEID=427472:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_133133001_133158001_28C;SPAN=171;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:4:19:8:8,0,37.7:4:0:-7.863:9.094\n7\t133151590\t427472:2\tG\t]7:133151419]G\t8\tPASS\tEVDNC=ASSMB;INSERTION=CAGGGCCACA;MAPQ=60;MATEID=427472:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_133133001_133158001_28C;SPAN=171;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:4:19:8:8,0,37.7:4:0:-7.863:9.094\n7\t133422936\t427543:1\tA\tA[7:133423251[\t22\tPASS\tEVDNC=ASSMB;HOMSEQ=AATAGAATTAATGGAGCA;MAPQ=60;MATEID=427543:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_7_133402501_133427501_32C;SPAN=315;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:27:22.1:22.1,0,45.2:9:0:-22.12:22.58\n7\t133423251\t427543:2\tA\t]7:133422936]A\t22\tPASS\tEVDNC=ASSMB;HOMSEQ=AATAGAATTAATGGAGCA;MAPQ=60;MATEID=427543:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_7_133402501_133427501_32C;SPAN=315;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:27:22.1:22.1,0,45.2:9:0:-22.12:22.58\n7\t133435161\t427546:1\tA\tA[8:103863624[\t42\tPASS\tEVDNC=ASSMB;HOMSEQ=TTA;MAPQ=60;MATEID=427546:2;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_7_133427001_133452001_4C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:14:13:3.9:42.9,3.9,0:14:0:-42.91:42.91\n7\t134739891\t427922:1\tC\t[9:108352880[C\t26\tPASS\tDISC_MAPQ=255;EVDNC=ASDIS;HOMSEQ=TAAAATTATG;MAPQ=60;MATEID=427922:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_134725501_134750501_66C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:9:8:2.4:26.4,2.4,0:8:2:-26.41:26.41\n7\t137149719\t428770:1\tT\tT[7:137150005[\t52\tPASS\tEVDNC=ASSMB;HOMSEQ=GACAAAGGACAATTCTT;MAPQ=60;MATEID=428770:2;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_7_137126501_137151501_31C;SPAN=286;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:18:11:4.8:52.8,4.8,0:18:0:-52.81:52.81\n7\t137150005\t428770:2\tG\t]7:137149719]G\t52\tPASS\tEVDNC=ASSMB;HOMSEQ=GACAAAGGACAATTCTT;MAPQ=60;MATEID=428770:1;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_7_137126501_137151501_31C;SPAN=286;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:18:11:4.8:52.8,4.8,0:18:0:-52.81:52.81\n7\t137638467\t428909:1\tT\t]7:137638575]T\t31\tPASS\tEVDNC=ASSMB;HOMSEQ=TATATATGTGTGTATATATATACACACATATAT;MAPQ=60;MATEID=428909:2;MATENM=1;NM=1;NUMPARTS=3;SCTG=c_7_137616501_137641501_8C;SECONDARY;SPAN=108;SUBN=3;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:18:11.6:31.4,0,11.6:11:0:-31.6:31.6\n7\t137638575\t428909:2\tT\tT[7:137638467[\t31\tPASS\tEVDNC=ASSMB;HOMSEQ=TATATATGTGTGTATATATATACACACATATAT;MAPQ=60;MATEID=428909:1;MATENM=1;NM=1;NUMPARTS=3;SCTG=c_7_137616501_137641501_8C;SECONDARY;SPAN=108;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:18:11.6:31.4,0,11.6:11:0:-31.6:31.6\n7\t138615526\t429186:1\tA\tA[7:138615753[\t46\tPASS\tEVDNC=ASSMB;HOMSEQ=CCACTGCACTCCA;MAPQ=60;MATEID=429186:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_7_138596501_138621501_46C;SPAN=227;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:16:8:4.2:46.2,4.2,0:16:0:-46.21:46.21\n7\t138615753\t429186:2\tC\t]7:138615526]C\t46\tPASS\tEVDNC=ASSMB;HOMSEQ=CCACTGCACTCCA;MAPQ=60;MATEID=429186:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_7_138596501_138621501_46C;SPAN=227;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:16:8:4.2:46.2,4.2,0:16:0:-46.21:46.21\n7\t139057536\t429380:1\tT\tT[7:139057840[\t66\tPASS\tEVDNC=ASSMB;HOMSEQ=AACAATTACATTTT;MAPQ=60;MATEID=429380:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_139037501_139062501_16C;SPAN=304;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:20:22:6:66,6,0:20:0:-64.93:64.93\n7\t139057840\t429380:2\tA\t]7:139057536]A\t66\tPASS\tEVDNC=ASSMB;HOMSEQ=AACAATTACATTTT;MAPQ=60;MATEID=429380:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_139037501_139062501_16C;SPAN=304;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:20:22:6:66,6,0:20:0:-64.93:64.93\n7\t141414080\t429954:1\tT\tT[7:141414383[\t52\tPASS\tEVDNC=ASSMB;HOMSEQ=CCAAAAACATCATTTTT;MAPQ=60;MATEID=429954:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_141414001_141439001_66C;SPAN=303;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:17:20:2.1:52.8,2.1,0:17:0:-53.67:53.67\n7\t141414383\t429954:2\tC\t]7:141414080]C\t52\tPASS\tEVDNC=ASSMB;HOMSEQ=CCAAAAACATCATTTTT;MAPQ=60;MATEID=429954:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_141414001_141439001_66C;SPAN=303;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:17:20:2.1:52.8,2.1,0:17:0:-53.67:53.67\n7\t142060063\t430145:1\tT\t]7:142086470]T\t42\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=430145:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:142060063(-)-7:142086470(+)__7_142075501_142100501D;SPAN=26407;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:14:1:3.9:42.9,3.9,0:0:14:-42.91:42.91\n7\t142060773\t430146:1\tA\tA[7:142087080[\t26\tPASS\tDISC_MAPQ=59;EVDNC=DSCRD;IMPRECISE;MAPQ=59;MATEID=430146:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:142060773(+)-7:142087080(-)__7_142075501_142100501D;SPAN=26307;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:9:5:2.4:26.4,2.4,0:0:9:-26.41:26.41\n7\t142086470\t430145:2\tG\tG[7:142060063[\t42\tPASS\tDISC_MAPQ=58;EVDNC=DSCRD;IMPRECISE;MAPQ=58;MATEID=430145:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:142060063(-)-7:142086470(+)__7_142075501_142100501D;SPAN=26407;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:14:1:3.9:42.9,3.9,0:0:14:-42.91:42.91\n7\t142087080\t430146:2\tT\t]7:142060773]T\t26\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=430146:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:142060773(+)-7:142087080(-)__7_142075501_142100501D;SPAN=26307;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:9:5:2.4:26.4,2.4,0:0:9:-26.41:26.41\n7\t142578304\t430476:1\tA\tA[7:142617917[\t26\tPASS\tEVDNC=ASSMB;INSERTION=CCGCC;MAPQ=60;MATEID=430476:2;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_7_142614501_142639501_55C;SPAN=39613;SUBN=2;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:12:3.2:26.3,0,3.2:9:0:-27.29:27.29\n7\t142617917\t430476:2\tA\t]7:142578304]A\t26\tPASS\tEVDNC=ASSMB;INSERTION=CCGCC;MAPQ=60;MATEID=430476:1;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_7_142614501_142639501_55C;SPAN=39613;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:12:3.2:26.3,0,3.2:9:0:-27.29:27.29\n7\t144800296\t431053:1\tA\tA]7:144860189]\t23\tPASS\tDISC_MAPQ=59;EVDNC=DSCRD;IMPRECISE;MAPQ=59;MATEID=431053:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:144800296(+)-7:144860189(+)__7_144844001_144869001D;SPAN=59893;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:12:6.5:23,0,6.5:0:8:-23.49:23.49\n7\t144860189\t431053:2\tG\tG]7:144800296]\t23\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=431053:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:144800296(+)-7:144860189(+)__7_144844001_144869001D;SPAN=59893;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:12:6.5:23,0,6.5:0:8:-23.49:23.49\n7\t146423113\t431501:1\tT\tT[7:146423454[\t35\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;INSERTION=AGCCATGGAAGA;MAPQ=60;MATEID=431501:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_146412001_146437001_3C;SPAN=341;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:28:35:35,0,35:9:6:-35.04:35.04\n7\t146423113\t431502:1\tT\tT[7:146423476[\t17\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;INSERTION=AGCCATGGAAGATTTTAGAAGTGTGAAAAAAAAA;MAPQ=60;MATEID=431502:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_146412001_146437001_14C;SPAN=363;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:33:17.3:17.3,0,63.5:4:6:-17.13:18.75\n7\t146423454\t431501:2\tT\t]7:146423113]T\t35\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;INSERTION=AGCCATGGAAGA;MAPQ=60;MATEID=431501:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_146412001_146437001_3C;SPAN=341;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:28:35:35,0,35:9:6:-35.04:35.04\n7\t146423476\t431502:2\tA\t]7:146423113]A\t17\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;INSERTION=AGCCATGGAAGATTTTAGAAGTGTGAAAAAAAAA;MAPQ=60;MATEID=431502:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_146412001_146437001_14C;SPAN=363;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:33:17.3:17.3,0,63.5:4:6:-17.13:18.75\n7\t146650871\t431567:1\tA\t]7:146657869]A\t34\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AACA;MAPQ=60;MATEID=431567:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_7_146657001_146682001_164C;SPAN=6998;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:20:14.3:34.1,0,14.3:9:5:-34.32:34.32\n7\t146657869\t431567:2\tA\tA[7:146650871[\t34\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AACA;MAPQ=60;MATEID=431567:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_7_146657001_146682001_164C;SPAN=6998;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:20:14.3:34.1,0,14.3:9:5:-34.32:34.32\n7\t147118431\t431713:1\tA\t]7:147118535]A\t64\tPASS\tEVDNC=ASSMB;HOMSEQ=ACTTT;MAPQ=60;MATEID=431713:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_7_147098001_147123001_44C;SPAN=104;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:24:53:64.4:64.4,0,67.7:24:0:-64.33:64.34\n7\t147118535\t431713:2\tT\tT[7:147118431[\t64\tPASS\tEVDNC=ASSMB;HOMSEQ=ACTTT;MAPQ=60;MATEID=431713:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_7_147098001_147123001_44C;SPAN=104;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:24:53:64.4:64.4,0,67.7:24:0:-64.33:64.34\n7\t147979998\t432064:1\tC\tC[7:147981158[\t26\tPASS\tEVDNC=ASSMB;HOMSEQ=AGC;MAPQ=60;MATEID=432064:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_147980001_148005001_24C;SPAN=1160;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:22:26.9:26.9,0,26.9:10:0:-26.83:26.83\n7\t147981158\t432064:2\tA\t]7:147979998]A\t26\tPASS\tEVDNC=ASSMB;HOMSEQ=AGC;MAPQ=60;MATEID=432064:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_147980001_148005001_24C;SPAN=1160;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:22:26.9:26.9,0,26.9:10:0:-26.83:26.83\n7\t148375877\t432209:1\tT\tT[7:148379231[\t59\tPASS\tDISC_MAPQ=52;EVDNC=DSCRD;IMPRECISE;MAPQ=52;MATEID=432209:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:148375877(+)-7:148379231(-)__7_148372001_148397001D;SPAN=3354;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:20:5:5.4:59.4,5.4,0:0:20:-59.41:59.41\n7\t148379231\t432209:2\tT\t]7:148375877]T\t59\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=432209:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:148375877(+)-7:148379231(-)__7_148372001_148397001D;SPAN=3354;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:20:5:5.4:59.4,5.4,0:0:20:-59.41:59.41\n7\t149121088\t432449:1\tT\tT[7:149121402[\t74\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;INSERTION=C;MAPQ=60;MATEID=432449:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_149107001_149132001_6C;SPAN=314;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:25:30:1.4:74,0,1.4:20:8:-78.37:78.37\n7\t149121402\t432449:2\tT\t]7:149121088]T\t74\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;INSERTION=C;MAPQ=60;MATEID=432449:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_149107001_149132001_6C;SPAN=314;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:25:30:1.4:74,0,1.4:20:8:-78.37:78.37\n7\t151346416\t433173:1\tT\tT[7:151349025[\t16\tPASS\tEVDNC=ASSMB;HOMSEQ=CCTTT;MAPQ=60;MATEID=433173:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_151336501_151361501_4C;SPAN=2609;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:7:23:16.7:16.7,0,39.8:7:0:-16.64:17.22\n7\t151349025\t433173:2\tC\t]7:151346416]C\t16\tPASS\tEVDNC=ASSMB;HOMSEQ=CCTTT;MAPQ=60;MATEID=433173:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_151336501_151361501_4C;SPAN=2609;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:7:23:16.7:16.7,0,39.8:7:0:-16.64:17.22\n7\t152548284\t433615:1\tC\tC[7:152549219[\t72\tPASS\tEVDNC=ASSMB;HOMSEQ=CCTGTAATCCCAGCACTTTGGGAGGCC;MAPQ=60;MATEID=433615:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_7_152537001_152562001_60C;SPAN=935;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:24:14:6.6:72.6,6.6,0:24:0:-72.62:72.62\n7\t152549219\t433615:2\tC\t]7:152548284]C\t72\tPASS\tEVDNC=ASSMB;HOMSEQ=CCTGTAATCCCAGCACTTTGGGAGGCC;MAPQ=60;MATEID=433615:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_7_152537001_152562001_60C;SPAN=935;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:24:14:6.6:72.6,6.6,0:24:0:-72.62:72.62\n7\t152555315\t433617:1\tT\t]7:152557061]T\t18\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TGCTGGGATTACAGGCGTGAGCCACTGCGCCTGGCCAA;MAPQ=60;MATEID=433617:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_7_152537001_152562001_37C;SPAN=1746;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:27:18.8:18.8,0,48.5:6:3:-18.82:19.57\n7\t152557061\t433617:2\tA\tA[7:152555315[\t18\tPASS\tDISC_MAPQ=49;EVDNC=ASDIS;HOMSEQ=TGCTGGGATTACAGGCGTGAGCCACTGCGCCTGGCCAA;MAPQ=60;MATEID=433617:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_7_152537001_152562001_37C;SPAN=1746;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:27:18.8:18.8,0,48.5:6:3:-18.82:19.57\n7\t152584618\t433637:1\tA\tA[7:152587221[\t56\tPASS\tEVDNC=ASSMB;HOMSEQ=CACATGTTTTA;MAPQ=60;MATEID=433637:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_152586001_152611001_2C;SPAN=2603;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:19:11:5.1:56.1,5.1,0:19:0:-56.11:56.11\n7\t152587221\t433637:2\tC\t]7:152584618]C\t56\tPASS\tEVDNC=ASSMB;HOMSEQ=CACATGTTTTA;MAPQ=60;MATEID=433637:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_152586001_152611001_2C;SPAN=2603;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:19:11:5.1:56.1,5.1,0:19:0:-56.11:56.11\n7\t152722328\t433703:1\tT\tT[7:152722631[\t46\tPASS\tEVDNC=ASSMB;HOMSEQ=GGATCACTACTTTT;MAPQ=60;MATEID=433703:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_152708501_152733501_91C;SPAN=303;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:15:18:1.5:46.2,1.5,0:15:0:-47.02:47.02\n7\t152722631\t433703:2\tG\t]7:152722328]G\t46\tPASS\tEVDNC=ASSMB;HOMSEQ=GGATCACTACTTTT;MAPQ=60;MATEID=433703:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_152708501_152733501_91C;SPAN=303;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:15:18:1.5:46.2,1.5,0:15:0:-47.02:47.02\n7\t153011383\t433769:1\tA\tA[7:153011761[\t28\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=433769:2;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_7_153002501_153027501_39C;SPAN=378;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:29:28.1:28.1,0,44.6:11:0:-28.16:28.37\n7\t153011761\t433769:2\tT\t]7:153011383]T\t28\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=433769:1;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_7_153002501_153027501_39C;SPAN=378;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:29:28.1:28.1,0,44.6:11:0:-28.16:28.37\n7\t153613053\t434011:1\tC\tC[7:153613733[\t75\tPASS\tEVDNC=ASSMB;HOMSEQ=AAAACTATAAC;MAPQ=60;MATEID=434011:2;MATENM=2;NM=9;NUMPARTS=2;SCTG=c_7_153590501_153615501_41C;SPAN=680;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:25:15:6.9:75.9,6.9,0:25:0:-75.92:75.92\n7\t153613733\t434011:2\tA\t]7:153613053]A\t75\tPASS\tEVDNC=ASSMB;HOMSEQ=AAAACTATAAC;MAPQ=60;MATEID=434011:1;MATENM=9;NM=2;NUMPARTS=2;SCTG=c_7_153590501_153615501_41C;SPAN=680;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:25:15:6.9:75.9,6.9,0:25:0:-75.92:75.92\n7\t154456858\t434314:1\tT\tT[7:154457985[\t62\tPASS\tDISC_MAPQ=56;EVDNC=DSCRD;IMPRECISE;MAPQ=56;MATEID=434314:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:154456858(+)-7:154457985(-)__7_154448001_154473001D;SPAN=1127;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:21:13:5.7:62.7,5.7,0:0:21:-62.72:62.72\n7\t154457985\t434314:2\tA\t]7:154456858]A\t62\tPASS\tDISC_MAPQ=56;EVDNC=DSCRD;IMPRECISE;MAPQ=56;MATEID=434314:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:154456858(+)-7:154457985(-)__7_154448001_154473001D;SPAN=1127;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:21:13:5.7:62.7,5.7,0:0:21:-62.72:62.72\n7\t154600273\t434395:1\tA\tA[7:154608021[\t72\tPASS\tDISC_MAPQ=53;EVDNC=ASDIS;HOMSEQ=CCAGGCTGGAGTACAGTGGCACAATCTCAGCTCACTGCAAGCTCTGCCTCCCGGGTTCAAGCAATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGATTACAGGCA;MAPQ=60;MATEID=434395:2;MATENM=18;NM=6;NUMPARTS=2;SCTG=c_7_154595001_154620001_21C;SPAN=7748;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:24:3:6.6:72.6,6.6,0:6:22:-72.62:72.62\n7\t154608021\t434395:2\tC\t]7:154600273]C\t72\tPASS\tDISC_MAPQ=42;EVDNC=ASDIS;HOMSEQ=CCAGGCTGGAGTACAGTGGCACAATCTCAGCTCACTGCAAGCTCTGCCTCCCGGGTTCAAGCAATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGATTACAGGCA;MAPQ=60;MATEID=434395:1;MATENM=6;NM=18;NUMPARTS=2;SCTG=c_7_154595001_154620001_21C;SPAN=7748;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:24:3:6.6:72.6,6.6,0:6:22:-72.62:72.62\n7\t155084843\t434580:1\tC\t]7:155088917]C\t46\tPASS\tEVDNC=ASSMB;HOMSEQ=C;MAPQ=60;MATEID=434580:2;MATENM=0;NM=3;NUMPARTS=2;SCTG=c_7_155085001_155110001_4C;SPAN=4074;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:15:12:4.2:46.2,4.2,0:15:0:-46.21:46.21\n7\t155085280\t434583:1\tG\tG[7:155088918[\t50\tPASS\tEVDNC=ASSMB;INSERTION=CTTAT;MAPQ=60;MATEID=434583:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_7_155085001_155110001_15C;SPAN=3638;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:18:34:33.5:50,0,33.5:18:0:-49.98:49.98\n7\t155088917\t434580:2\tC\tC[7:155084843[\t46\tPASS\tEVDNC=ASSMB;HOMSEQ=C;MAPQ=60;MATEID=434580:1;MATENM=3;NM=0;NUMPARTS=2;SCTG=c_7_155085001_155110001_4C;SPAN=4074;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:15:12:4.2:46.2,4.2,0:15:0:-46.21:46.21\n7\t155088918\t434583:2\tT\t]7:155085280]T\t50\tPASS\tEVDNC=ASSMB;INSERTION=CTTAT;MAPQ=60;MATEID=434583:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_7_155085001_155110001_15C;SPAN=3638;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:18:34:33.5:50,0,33.5:18:0:-49.98:49.98\n7\t155150222\t434599:1\tA\tA[7:155150535[\t42\tPASS\tEVDNC=ASSMB;HOMSEQ=AAGAAAAGTGGGTGCAA;MAPQ=60;MATEID=434599:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_7_155134001_155159001_115C;SPAN=313;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:14:17:1.2:42.9,1.2,0:14:0:-43.71:43.71\n7\t155150535\t434599:2\tA\t]7:155150222]A\t42\tPASS\tEVDNC=ASSMB;HOMSEQ=AAGAAAAGTGGGTGCAA;MAPQ=60;MATEID=434599:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_7_155134001_155159001_115C;SPAN=313;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:14:17:1.2:42.9,1.2,0:14:0:-43.71:43.71\n7\t155891399\t435004:1\tA\t]Un_JTFH01000557v1_decoy:1459]A\t29\tPASS\tEVDNC=ASSMB;HOMSEQ=AGGTGGTGGTGGC;MAPQ=60;MATEID=435004:2;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_7_155869001_155894001_89C;SPAN=-1;SUBN=5;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:9:10:2.7:29.7,2.7,0:9:0:-29.08:29.08\n7\t155932667\t435025:1\tG\tG[7:155932869[\t49\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=ATGTGTG;MAPQ=60;MATEID=435025:2;MATENM=5;NM=0;NUMPARTS=2;SCTG=c_7_155918001_155943001_73C;SPAN=202;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:17:24:9.8:49.4,0,9.8:12:6:-50.74:50.74\n7\t155932869\t435025:2\tA\t]7:155932667]A\t49\tPASS\tDISC_MAPQ=45;EVDNC=ASDIS;HOMSEQ=ATGTGTG;MAPQ=60;MATEID=435025:1;MATENM=0;NM=5;NUMPARTS=2;SCTG=c_7_155918001_155943001_73C;SPAN=202;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:17:24:9.8:49.4,0,9.8:12:6:-50.74:50.74\n7\t156957886\t435424:1\tT\t]7:156959338]T\t59\tPASS\tDISC_MAPQ=52;EVDNC=ASDIS;HOMSEQ=TTG;MAPQ=60;MATEID=435424:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_7_156947001_156972001_74C;SPAN=1452;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:20:25:2.9:59,0,2.9:13:13:-61.85:61.85\n7\t156958050\t435425:1\tC\tC[7:156959338[\t30\tPASS\tEVDNC=ASSMB;INSERTION=A;MAPQ=60;MATEID=435425:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_7_156947001_156972001_77C;SPAN=1288;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:32:30.8:30.8,0,47.3:12:0:-30.62:30.87\n7\t156959338\t435424:2\tG\tG[7:156957886[\t59\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TTG;MAPQ=60;MATEID=435424:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_7_156947001_156972001_74C;SPAN=1452;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:20:25:2.9:59,0,2.9:13:13:-61.85:61.85\n7\t156959338\t435425:2\tG\t]7:156958050]G\t30\tPASS\tEVDNC=ASSMB;INSERTION=A;MAPQ=60;MATEID=435425:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_7_156947001_156972001_77C;SPAN=1288;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:32:30.8:30.8,0,47.3:12:0:-30.62:30.87\n7\t158410836\t436263:1\tT\t]7:158410940]T\t35\tPASS\tEVDNC=ASSMB;HOMSEQ=TGGGAGGCCCC;MAPQ=60;MATEID=436263:2;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_7_158392501_158417501_21C;SPAN=104;SUBN=2;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:40:35:35,0,64.7:14:0:-34.97:35.49\n7\t158410940\t436263:2\tC\tC[7:158410836[\t35\tPASS\tEVDNC=ASSMB;HOMSEQ=TGGGAGGCCCC;MAPQ=60;MATEID=436263:1;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_7_158392501_158417501_21C;SPAN=104;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:40:35:35,0,64.7:14:0:-34.97:35.49\n7\t158454926\t436501:1\tG\t]7:158848272]G\t19\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=436501:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_158833501_158858501_32C;SPAN=393346;SUBN=1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:24:19.7:19.7,0,39.5:8:0:-19.66:20.07\n7\t158848272\t436501:2\tC\tC[7:158454926[\t19\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=436501:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_158833501_158858501_32C;SPAN=393346;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:24:19.7:19.7,0,39.5:8:0:-19.66:20.07\n8\t245406\t485861:1\tG\t]9:11384325]G\t25\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=GTG;MAPQ=60;MATEID=485861:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_11368001_11393001_5C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:17:15.2:25.1,0,15.2:4:6:-24.99:24.99\n8\t644397\t436892:1\tG\tG[8:649415[\t52\tPASS\tEVDNC=ASSMB;INSERTION=CAA;MAPQ=60;MATEID=436892:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_8_637001_662001_88C;SPAN=5018;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:18:9:4.8:52.8,4.8,0:18:0:-52.81:52.81\n8\t649415\t436892:2\tG\t]8:644397]G\t52\tPASS\tEVDNC=ASSMB;INSERTION=CAA;MAPQ=60;MATEID=436892:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_8_637001_662001_88C;SPAN=5018;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:18:9:4.8:52.8,4.8,0:18:0:-52.81:52.81\n8\t1724902\t13008:2\tA\t[1:53954234[A\t26\tPASS\tDISC_MAPQ=44;EVDNC=TSI_L;HOMSEQ=A;INSERTION=AGCCCAGAGACAGAGCTTTCAAGGTGCCTGCTCAGTTTATGAGCCAAGTTTCTATTCTTTTCTGCATGTGTTT;MAPQ=60;MATEID=13008:1;MATENM=0;NM=0;NUMPARTS=3;SCTG=c_1_53949001_53974001_174C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:16:93:26.9:26.9,0,205.1:16:3:-26.67:34.81\n8\t2085602\t437510:1\tC\tC[8:2086130[\t62\tPASS\tDISC_MAPQ=60;EVDNC=TSI_L;HOMSEQ=CACTGTCGTGATCTCCGCGTGGCCCCCCACTGTTGTGATCTCTGCGTGGCCCCACTGTCGTGATCTCTGCGTGGCCCCACTGTTGTGATCTTTGCGTGGCCCCACTGTC;MAPQ=60;MATEID=437510:2;MATENM=31;NM=4;NUMPARTS=3;SCTG=c_8_2082501_2107501_114C;SPAN=528;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:21:4:5.7:62.7,5.7,0:3:18:-62.72:62.72\n8\t2086130\t437510:2\tC\t]8:2085602]C\t62\tPASS\tDISC_MAPQ=16;EVDNC=TSI_L;HOMSEQ=CACTGTCGTGATCTCCGCGTGGCCCCCCACTGTTGTGATCTCTGCGTGGCCCCACTGTCGTGATCTCTGCGTGGCCCCACTGTTGTGATCTTTGCGTGGCCCCACTGTC;MAPQ=60;MATEID=437510:1;MATENM=4;NM=31;NUMPARTS=3;SCTG=c_8_2082501_2107501_114C;SPAN=528;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:21:4:5.7:62.7,5.7,0:3:18:-62.72:62.72\n8\t3115324\t437859:1\tC\t]8:3153710]C\t17\tPASS\tEVDNC=ASSMB;HOMSEQ=CCCAGG;MAPQ=60;MATEID=437859:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_3136001_3161001_36C;SPAN=38386;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:7:21:17.3:17.3,0,33.8:7:0:-17.2:17.56\n8\t3153710\t437859:2\tG\tG[8:3115324[\t17\tPASS\tEVDNC=ASSMB;HOMSEQ=CCCAGG;MAPQ=60;MATEID=437859:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_3136001_3161001_36C;SPAN=38386;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:7:21:17.3:17.3,0,33.8:7:0:-17.2:17.56\n8\t3926369\t438321:1\tC\tC[8:3927626[\t44\tPASS\tEVDNC=ASSMB;INSERTION=C;MAPQ=60;MATEID=438321:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_8_3920001_3945001_99C;SPAN=1257;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:15:20:4.4:44,0,4.4:15:0:-45.49:45.49\n8\t3927626\t438321:2\tC\t]8:3926369]C\t44\tPASS\tEVDNC=ASSMB;INSERTION=C;MAPQ=60;MATEID=438321:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_8_3920001_3945001_99C;SPAN=1257;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:15:20:4.4:44,0,4.4:15:0:-45.49:45.49\n8\t4137359\t438395:1\tT\tT[8:4137824[\t44\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;INSERTION=ATGTCAC;MAPQ=60;MATEID=438395:2;MATENM=7;NM=0;NUMPARTS=2;SCTG=c_8_4116001_4141001_71C;SPAN=465;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:15:20:4.4:44,0,4.4:12:6:-45.49:45.49\n8\t4137824\t438395:2\tA\t]8:4137359]A\t44\tPASS\tDISC_MAPQ=48;EVDNC=ASDIS;INSERTION=ATGTCAC;MAPQ=60;MATEID=438395:1;MATENM=0;NM=7;NUMPARTS=2;SCTG=c_8_4116001_4141001_71C;SPAN=465;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:15:20:4.4:44,0,4.4:12:6:-45.49:45.49\n8\t4265362\t438458:1\tT\tT[8:4267451[\t31\tPASS\tEVDNC=ASSMB;INSERTION=TACATAATAATAT;MAPQ=60;MATEID=438458:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_8_4263001_4288001_41C;SPAN=2089;SUBN=5;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:30:31.1:31.1,0,44.3:12:0:-31.18:31.31\n8\t4267451\t438458:2\tA\t]8:4265362]A\t31\tPASS\tEVDNC=ASSMB;INSERTION=TACATAATAATAT;MAPQ=60;MATEID=438458:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_8_4263001_4288001_41C;SPAN=2089;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:30:31.1:31.1,0,44.3:12:0:-31.18:31.31\n8\t4686301\t438597:1\tT\tT[8:4686729[\t49\tPASS\tEVDNC=ASSMB;HOMSEQ=CAT;MAPQ=60;MATEID=438597:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_4679501_4704501_79C;SPAN=428;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:17:17:4.5:49.5,4.5,0:17:0:-49.51:49.51\n8\t4686729\t438597:2\tC\t]8:4686301]C\t49\tPASS\tEVDNC=ASSMB;HOMSEQ=CAT;MAPQ=60;MATEID=438597:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_4679501_4704501_79C;SPAN=428;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:17:17:4.5:49.5,4.5,0:17:0:-49.51:49.51\n8\t5083713\t438785:1\tA\tA[8:5083999[\t58\tPASS\tEVDNC=ASSMB;HOMSEQ=AAGATGGAAGTA;MAPQ=60;MATEID=438785:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_8_5071501_5096501_19C;SPAN=286;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:20:27:8.9:58.4,0,8.9:20:0:-60.44:60.44\n8\t5083999\t438785:2\tA\t]8:5083713]A\t58\tPASS\tEVDNC=ASSMB;HOMSEQ=AAGATGGAAGTA;MAPQ=60;MATEID=438785:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_8_5071501_5096501_19C;SPAN=286;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:20:27:8.9:58.4,0,8.9:20:0:-60.44:60.44\n8\t5737994\t439044:1\tC\tC[8:5748258[\t21\tPASS\tEVDNC=ASSMB;INSERTION=AC;MAPQ=60;MATEID=439044:2;MATENM=1;NM=2;NUMPARTS=2;SCTG=c_8_5733001_5758001_8C;SPAN=10264;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:28:21.8:21.8,0,48.2:9:0:-21.84:22.4\n8\t5748258\t439044:2\tT\t]8:5737994]T\t21\tPASS\tEVDNC=ASSMB;INSERTION=AC;MAPQ=60;MATEID=439044:1;MATENM=2;NM=1;NUMPARTS=2;SCTG=c_8_5733001_5758001_8C;SPAN=10264;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:28:21.8:21.8,0,48.2:9:0:-21.84:22.4\n8\t5890665\t439087:1\tA\tA[8:5890984[\t38\tPASS\tEVDNC=ASSMB;HOMSEQ=AAAAATGGAGA;MAPQ=60;MATEID=439087:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_5880001_5905001_64C;SPAN=319;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:27:28.7:38.6,0,28.7:14:0:-38.69:38.69\n8\t5890984\t439087:2\tA\t]8:5890665]A\t38\tPASS\tEVDNC=ASSMB;HOMSEQ=AAAAATGGAGA;MAPQ=60;MATEID=439087:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_5880001_5905001_64C;SPAN=319;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:27:28.7:38.6,0,28.7:14:0:-38.69:38.69\n8\t6678940\t439496:2\tA\t[1:59491056[A\t42\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAA;MAPQ=60;MATEID=439496:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_6664001_6689001_35C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:14:6:3.9:42.9,3.9,0:12:2:-42.91:42.91\n8\t6933349\t439600:1\tA\tA[8:6933672[\t99\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;INSERTION=GCTGCTTAGGAAAAACAGTG;MAPQ=60;MATEID=439600:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_8_6933501_6958501_69C;SPAN=323;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:33:7:9:99,9,0:24:12:-99.02:99.02\n8\t6933672\t439600:2\tC\t]8:6933349]C\t99\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;INSERTION=GCTGCTTAGGAAAAACAGTG;MAPQ=60;MATEID=439600:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_8_6933501_6958501_69C;SPAN=323;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:33:7:9:99,9,0:24:12:-99.02:99.02\n8\t7134147\t439657:1\tG\tG[8:7137881[\t52\tPASS\tEVDNC=ASSMB;HOMSEQ=TGCCTGG;MAPQ=59;MATEID=439657:2;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_8_7129501_7154501_89C;SPAN=3734;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:17:18:4.8:52.8,4.8,0:17:0:-52.81:52.81\n8\t7137881\t439657:2\tT\t]8:7134147]T\t52\tPASS\tEVDNC=ASSMB;HOMSEQ=TGCCTGG;MAPQ=60;MATEID=439657:1;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_8_7129501_7154501_89C;SPAN=3734;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:17:18:4.8:52.8,4.8,0:17:0:-52.81:52.81\n8\t11388052\t441018:1\tG\tG[8:11389699[\t72\tPASS\tEVDNC=ASSMB;HOMSEQ=AAG;MAPQ=60;MATEID=441018:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_11368001_11393001_58C;SPAN=1647;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:24:21:6.6:72.6,6.6,0:24:0:-72.62:72.62\n8\t11389699\t441018:2\tA\t]8:11388052]A\t72\tPASS\tEVDNC=ASSMB;HOMSEQ=AAG;MAPQ=60;MATEID=441018:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_11368001_11393001_58C;SPAN=1647;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:24:21:6.6:72.6,6.6,0:24:0:-72.62:72.62\n8\t11930717\t441301:1\tA\t]8:12035858]A\t69\tPASS\tDISC_MAPQ=50;EVDNC=DSCRD;IMPRECISE;MAPQ=50;MATEID=441301:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=8:11930717(-)-8:12035858(+)__8_12029501_12054501D;SPAN=105141;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:23:14:6.3:69.3,6.3,0:0:23:-69.32:69.32\n8\t12035858\t441301:2\tT\tT[8:11930717[\t69\tPASS\tDISC_MAPQ=50;EVDNC=DSCRD;IMPRECISE;MAPQ=50;MATEID=441301:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=8:11930717(-)-8:12035858(+)__8_12029501_12054501D;SPAN=105141;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:23:14:6.3:69.3,6.3,0:0:23:-69.32:69.32\n8\t12570090\t441563:1\tA\t]8:12628231]A\t26\tPASS\tDISC_MAPQ=37;EVDNC=DSCRD;IMPRECISE;MAPQ=37;MATEID=441563:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=8:12570090(-)-8:12628231(+)__8_12568501_12593501D;SPAN=58141;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:24:26.3:26.3,0,32.9:0:10:-26.26:26.32\n8\t12570404\t441566:1\tA\tA[8:12575326[\t39\tPASS\tDISC_MAPQ=40;EVDNC=DSCRD;IMPRECISE;MAPQ=40;MATEID=441566:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=8:12570404(+)-8:12575326(-)__8_12568501_12593501D;SPAN=4922;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:17:61:39.2:39.2,0,111.8:0:17:-38.97:41.04\n8\t12575326\t441566:2\tT\t]8:12570404]T\t39\tPASS\tDISC_MAPQ=36;EVDNC=DSCRD;IMPRECISE;MAPQ=36;MATEID=441566:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=8:12570404(+)-8:12575326(-)__8_12568501_12593501D;SPAN=4922;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:17:61:39.2:39.2,0,111.8:0:17:-38.97:41.04\n8\t12628231\t441563:2\tT\tT[8:12570090[\t26\tPASS\tDISC_MAPQ=25;EVDNC=DSCRD;IMPRECISE;MAPQ=25;MATEID=441563:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=8:12570090(-)-8:12628231(+)__8_12568501_12593501D;SPAN=58141;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:24:26.3:26.3,0,32.9:0:10:-26.26:26.32\n8\t13312080\t441914:1\tG\tG[8:13312384[\t2\tPASS\tEVDNC=ASSMB;HOMSEQ=AAAAATAATTTCTTTAG;MAPQ=60;MATEID=441914:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_13303501_13328501_75C;SPAN=304;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:5:51:2.3:2.3,0,124.4:5:0:-2.169:9.566\n8\t13312384\t441914:2\tA\t]8:13312080]A\t2\tPASS\tEVDNC=ASSMB;HOMSEQ=AAAAATAATTTCTTTAG;MAPQ=60;MATEID=441914:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_13303501_13328501_75C;SPAN=304;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:5:51:2.3:2.3,0,124.4:5:0:-2.169:9.566\n8\t14101377\t442359:1\tG\t]8:14101564]G\t35\tPASS\tEVDNC=ASSMB;HOMSEQ=G;MAPQ=60;MATEID=442359:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_14087501_14112501_40C;SPAN=187;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:40:35:35,0,64.7:14:0:-34.97:35.49\n8\t14101564\t442359:2\tG\tG[8:14101377[\t35\tPASS\tEVDNC=ASSMB;HOMSEQ=G;MAPQ=60;MATEID=442359:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_14087501_14112501_40C;SPAN=187;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:40:35:35,0,64.7:14:0:-34.97:35.49\n8\t15143770\t442750:1\tT\tT[8:15144078[\t92\tPASS\tEVDNC=ASSMB;HOMSEQ=CTATTATTACCTT;MAPQ=60;MATEID=442750:2;MATENM=0;NM=5;NUMPARTS=2;SCTG=c_8_15141001_15166001_10C;SPAN=308;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:31:20:8.4:92.4,8.4,0:31:0:-92.42:92.42\n8\t15144078\t442750:2\tC\t]8:15143770]C\t92\tPASS\tEVDNC=ASSMB;HOMSEQ=CTATTATTACCTT;MAPQ=60;MATEID=442750:1;MATENM=5;NM=0;NUMPARTS=2;SCTG=c_8_15141001_15166001_10C;SPAN=308;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:31:20:8.4:92.4,8.4,0:31:0:-92.42:92.42\n8\t15965406\t443106:1\tG\tG[8:15979503[\t46\tPASS\tEVDNC=ASSMB;HOMSEQ=AG;MAPQ=60;MATEID=443106:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_15974001_15999001_23C;SPAN=14097;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:15:15:4.2:46.2,4.2,0:15:0:-46.21:46.21\n8\t15979503\t443106:2\tA\t]8:15965406]A\t46\tPASS\tEVDNC=ASSMB;HOMSEQ=AG;MAPQ=60;MATEID=443106:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_15974001_15999001_23C;SPAN=14097;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:15:15:4.2:46.2,4.2,0:15:0:-46.21:46.21\n8\t16176924\t443194:1\tG\t]8:16188715]G\t23\tPASS\tDISC_MAPQ=56;EVDNC=DSCRD;IMPRECISE;MAPQ=56;MATEID=443194:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=8:16176924(-)-8:16188715(+)__8_16170001_16195001D;SPAN=11791;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:35:23.3:23.3,0,62.9:0:10:-23.17:24.27\n8\t16188715\t443194:2\tC\tC[8:16176924[\t23\tPASS\tDISC_MAPQ=58;EVDNC=DSCRD;IMPRECISE;MAPQ=58;MATEID=443194:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=8:16176924(-)-8:16188715(+)__8_16170001_16195001D;SPAN=11791;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:35:23.3:23.3,0,62.9:0:10:-23.17:24.27\n8\t16297189\t443263:1\tT\t]8:16297276]T\t41\tPASS\tEVDNC=ASSMB;HOMSEQ=TTACATTTAAATGT;MAPQ=56;MATEID=443263:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_16292501_16317501_11C;SPAN=87;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:16:42:41:41,0,64.1:16:0:-41.01:41.3\n8\t16297276\t443263:2\tT\tT[8:16297189[\t41\tPASS\tEVDNC=ASSMB;HOMSEQ=TTACATTTAAATGT;MAPQ=60;MATEID=443263:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_16292501_16317501_11C;SPAN=87;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:16:42:41:41,0,64.1:16:0:-41.01:41.3\n8\t16964371\t443510:1\tG\tG[8:16964741[\t59\tPASS\tEVDNC=ASSMB;HOMSEQ=G;MAPQ=60;MATEID=443510:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_16954001_16979001_86C;SPAN=370;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:20:20:5.4:59.4,5.4,0:20:0:-59.41:59.41\n8\t16964741\t443510:2\tG\t]8:16964371]G\t59\tPASS\tEVDNC=ASSMB;HOMSEQ=G;MAPQ=60;MATEID=443510:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_16954001_16979001_86C;SPAN=370;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:20:20:5.4:59.4,5.4,0:20:0:-59.41:59.41\n8\t17104713\t443545:1\tC\tC[8:17105020[\t23\tPASS\tEVDNC=ASSMB;HOMSEQ=AAAAATTCCAGATATC;MAPQ=60;MATEID=443545:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_17101001_17126001_12C;SPAN=307;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:23:23.3:23.3,0,33.2:9:0:-23.24:23.37\n8\t17105020\t443545:2\tA\t]8:17104713]A\t23\tPASS\tEVDNC=ASSMB;HOMSEQ=AAAAATTCCAGATATC;MAPQ=60;MATEID=443545:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_17101001_17126001_12C;SPAN=307;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:23:23.3:23.3,0,33.2:9:0:-23.24:23.37\n8\t17408106\t443658:1\tA\tA[8:17408417[\t66\tPASS\tEVDNC=ASSMB;HOMSEQ=AAGAACATCATGGA;MAPQ=60;MATEID=443658:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_17395001_17420001_29C;SPAN=311;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:22:17:6:66,6,0:22:0:-66.02:66.02\n8\t17408417\t443658:2\tA\t]8:17408106]A\t66\tPASS\tEVDNC=ASSMB;HOMSEQ=AAGAACATCATGGA;MAPQ=60;MATEID=443658:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_17395001_17420001_29C;SPAN=311;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:22:17:6:66,6,0:22:0:-66.02:66.02\n8\t18594144\t444074:1\tT\tT[8:18594341[\t9\tPASS\tEVDNC=ASSMB;HOMSEQ=ATATATATT;MAPQ=60;MATEID=444074:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_8_18571001_18596001_54C;SPAN=197;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:4:1:0.9:9.9,0.9,0:4:0:-9.903:9.903\n8\t18594341\t444074:2\tA\t]8:18594144]A\t9\tPASS\tEVDNC=ASSMB;HOMSEQ=ATATATATT;MAPQ=60;MATEID=444074:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_8_18571001_18596001_54C;SPAN=197;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:4:1:0.9:9.9,0.9,0:4:0:-9.903:9.903\n8\t18597110\t444086:1\tC\tC[8:18598435[\t99\tPASS\tEVDNC=ASSMB;HOMSEQ=AAAAGGATC;MAPQ=60;MATEID=444086:2;MATENM=3;NM=2;NUMPARTS=2;SCTG=c_8_18595501_18620501_89C;SPAN=1325;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:36:26:9.9:108.9,9.9,0:36:0:-108.9:108.9\n8\t18598435\t444086:2\tA\t]8:18597110]A\t99\tPASS\tEVDNC=ASSMB;HOMSEQ=AAAAGGATC;MAPQ=60;MATEID=444086:1;MATENM=2;NM=3;NUMPARTS=2;SCTG=c_8_18595501_18620501_89C;SPAN=1325;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:36:26:9.9:108.9,9.9,0:36:0:-108.9:108.9\n8\t18793948\t444132:1\tC\tC[8:18794916[\t62\tPASS\tEVDNC=ASSMB;HOMSEQ=ATGAAGC;MAPQ=60;MATEID=444132:2;MATENM=4;NM=2;NUMPARTS=2;SCTG=c_8_18791501_18816501_13C;SPAN=968;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:21:13:5.7:62.7,5.7,0:21:0:-62.72:62.72\n8\t18794916\t444132:2\tA\t]8:18793948]A\t62\tPASS\tEVDNC=ASSMB;HOMSEQ=ATGAAGC;MAPQ=60;MATEID=444132:1;MATENM=2;NM=4;NUMPARTS=2;SCTG=c_8_18791501_18816501_13C;SPAN=968;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:21:13:5.7:62.7,5.7,0:21:0:-62.72:62.72\n8\t19865725\t444480:1\tA\t]8:19865798]A\t15\tPASS\tEVDNC=ASSMB;HOMSEQ=AGGAAGGAAAGAAA;MAPQ=60;MATEID=444480:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_8_19845001_19870001_47C;SPAN=73;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:38:15.8:15.8,0,78.5:8:0:-15.73:18.19\n8\t19865798\t444480:2\tA\tA[8:19865725[\t15\tPASS\tEVDNC=ASSMB;HOMSEQ=AGGAAGGAAAGAAA;MAPQ=60;MATEID=444480:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_8_19845001_19870001_47C;SPAN=73;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:38:15.8:15.8,0,78.5:8:0:-15.73:18.19\n8\t21085893\t444758:1\tC\tC[8:21086296[\t62\tPASS\tEVDNC=ASSMB;HOMSEQ=C;MAPQ=60;MATEID=444758:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_21070001_21095001_2C;SPAN=403;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:21:20:5.7:62.7,5.7,0:21:0:-62.72:62.72\n8\t21086296\t444758:2\tC\t]8:21085893]C\t62\tPASS\tEVDNC=ASSMB;HOMSEQ=C;MAPQ=60;MATEID=444758:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_21070001_21095001_2C;SPAN=403;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:21:20:5.7:62.7,5.7,0:21:0:-62.72:62.72\n8\t21517297\t444821:1\tC\t[Un_JTFH01000350v1_decoy:1[C\t66\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=444821:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_21511001_21536001_23C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:22:18:6:66,6,0:22:0:-66.02:66.02\n8\t21517297\t997407:1\tC\t[Un_JTFH01000350v1_decoy:1[C\t69\tPASS\tDISC_MAPQ=255;EVDNC=TSI_L;MAPQ=60;MATEID=997407:2;MATENM=0;NM=0;NUMPARTS=5;SCTG=c_1193_1_1954_0C;SPAN=-1;SUBN=4;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:23:7:6.3:69.3,6.3,0:23:0:-69.32:69.32\n8\t21766795\t1010911:1\tA\t]Un_JTFH01001939v1_decoy:2292]A\t36\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=1010911:2;MATENM=2;NM=1;NUMPARTS=2;SCTG=c_2782_1_2292_4C;SPAN=-1;SUBN=7;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:12:4:3.3:36.3,3.3,0:12:0:-36.31:36.31\n8\t21766797\t1010912:1\tA\tA[Un_JTFH01001939v1_decoy:1[\t62\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=1010912:2;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_2782_1_2292_7C;SPAN=-1;SUBN=6;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:21:6:5.7:62.7,5.7,0:21:0:-62.72:62.72\n8\t21766797\t444889:1\tA\tA[Un_JTFH01001939v1_decoy:1[\t66\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=444889:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_8_21756001_21781001_45C;SPAN=-1;SUBN=4;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:22:11:6:66,6,0:22:0:-66.02:66.02\n8\t22332116\t445121:1\tC\t]8:22500234]C\t38\tPASS\tDISC_MAPQ=53;EVDNC=ASDIS;MAPQ=60;MATEID=445121:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_22491001_22516001_10C;SPAN=168118;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:27:28.7:38.6,0,28.7:8:10:-38.69:38.69\n8\t22500234\t445121:2\tT\tT[8:22332116[\t38\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;MAPQ=60;MATEID=445121:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_22491001_22516001_10C;SPAN=168118;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:27:28.7:38.6,0,28.7:8:10:-38.69:38.69\n8\t25114919\t445971:1\tC\tC[8:25133429[\t72\tPASS\tEVDNC=ASSMB;HOMSEQ=AC;MAPQ=60;MATEID=445971:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_25112501_25137501_73C;SPAN=18510;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:24:17:6.6:72.6,6.6,0:24:0:-72.62:72.62\n8\t25133429\t445971:2\tA\t]8:25114919]A\t72\tPASS\tEVDNC=ASSMB;HOMSEQ=AC;MAPQ=60;MATEID=445971:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_25112501_25137501_73C;SPAN=18510;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:24:17:6.6:72.6,6.6,0:24:0:-72.62:72.62\n8\t25209169\t446016:1\tG\tG[8:25213137[\t36\tPASS\tEVDNC=ASSMB;HOMSEQ=GGCTCAG;MAPQ=60;MATEID=446016:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_25210501_25235501_34C;SPAN=3968;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:12:9:3.3:36.3,3.3,0:12:0:-36.31:36.31\n8\t25213137\t446016:2\tG\t]8:25209169]G\t36\tPASS\tEVDNC=ASSMB;HOMSEQ=GGCTCAG;MAPQ=60;MATEID=446016:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_25210501_25235501_34C;SPAN=3968;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:12:9:3.3:36.3,3.3,0:12:0:-36.31:36.31\n8\t25340917\t446063:1\tT\tT[8:25341712[\t18\tPASS\tEVDNC=ASSMB;HOMSEQ=AATT;MAPQ=60;MATEID=446063:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_25333001_25358001_15C;SPAN=795;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:29:18.2:18.2,0,54.5:8:0:-18.26:19.27\n8\t25341712\t446063:2\tA\t]8:25340917]A\t18\tPASS\tEVDNC=ASSMB;HOMSEQ=AATT;MAPQ=60;MATEID=446063:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_25333001_25358001_15C;SPAN=795;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:29:18.2:18.2,0,54.5:8:0:-18.26:19.27\n8\t28576446\t817809:1\tG\tG[17:81799230[\t36\tPASS\tDISC_MAPQ=55;EVDNC=DSCRD;IMPRECISE;MAPQ=55;MATEID=817809:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=8:28576446(+)-17:81799230(-)__17_81781001_81806001D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:12:2:3.3:36.3,3.3,0:0:12:-36.31:36.31\n8\t28650137\t447158:1\tA\t]8:28712090]A\t39\tPASS\tDISC_MAPQ=38;EVDNC=DSCRD;IMPRECISE;MAPQ=38;MATEID=447158:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=8:28650137(-)-8:28712090(+)__8_28689501_28714501D;SPAN=61953;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:12:13:3.6:39.6,3.6,0:0:12:-39.28:39.28\n8\t28712090\t447158:2\tG\tG[8:28650137[\t39\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=447158:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=8:28650137(-)-8:28712090(+)__8_28689501_28714501D;SPAN=61953;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:12:13:3.6:39.6,3.6,0:0:12:-39.28:39.28\n8\t29980022\t447488:1\tA\tA[8:29980770[\t32\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=447488:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_8_29963501_29988501_45C;SPAN=748;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:15:5.6:32,0,5.6:11:0:-33.15:33.15\n8\t29980770\t447488:2\tA\t]8:29980022]A\t32\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=447488:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_8_29963501_29988501_45C;SPAN=748;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:15:5.6:32,0,5.6:11:0:-33.15:33.15\n8\t32822491\t448497:1\tG\tG[8:32833744[\t59\tPASS\tEVDNC=ASSMB;HOMSEQ=CAGG;MAPQ=60;MATEID=448497:2;MATENM=0;NM=6;NUMPARTS=2;SCTG=c_8_32805501_32830501_21C;SPAN=11253;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:20:5:5.4:59.4,5.4,0:20:0:-59.41:59.41\n8\t32833744\t448497:2\tC\t]8:32822491]C\t59\tPASS\tEVDNC=ASSMB;HOMSEQ=CAGG;MAPQ=60;MATEID=448497:1;MATENM=6;NM=0;NUMPARTS=2;SCTG=c_8_32805501_32830501_21C;SPAN=11253;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:20:5:5.4:59.4,5.4,0:20:0:-59.41:59.41\n8\t35555406\t449149:1\tA\tA[12:52358976[\t26\tPASS\tDISC_MAPQ=53;EVDNC=DSCRD;IMPRECISE;MAPQ=53;MATEID=449149:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=8:35555406(+)-12:52358976(-)__8_35549501_35574501D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:9:8:2.4:26.4,2.4,0:0:9:-26.41:26.41\n8\t35961094\t449181:1\tT\t]8:35972220]T\t29\tPASS\tDISC_MAPQ=51;EVDNC=ASDIS;INSERTION=ATGATTC;MAPQ=60;MATEID=449181:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_35966001_35991001_0C;SPAN=11126;SUBN=1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:10:5:2.7:29.7,2.7,0:4:7:-29.71:29.71\n8\t35972220\t449181:2\tA\tA[8:35961094[\t29\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;INSERTION=ATGATTC;MAPQ=60;MATEID=449181:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_35966001_35991001_0C;SPAN=11126;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:10:5:2.7:29.7,2.7,0:4:7:-29.71:29.71\n8\t37645401\t449440:1\tG\t]Un_JTFH01000913v1_decoy:1045]G\t56\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=449440:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_37632001_37657001_23C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:19:12:5.1:56.1,5.1,0:19:0:-56.11:56.11\n8\t39096102\t449794:1\tA\tA[8:39096363[\t42\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;INSERTION=A;MAPQ=60;MATEID=449794:2;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_8_39077501_39102501_30C;SPAN=261;SUBN=2;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:14:13:3.9:42.9,3.9,0:10:4:-42.91:42.91\n8\t39096363\t449794:2\tT\t]8:39096102]T\t42\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;INSERTION=A;MAPQ=60;MATEID=449794:1;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_8_39077501_39102501_30C;SPAN=261;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:14:13:3.9:42.9,3.9,0:10:4:-42.91:42.91\n8\t39907811\t450065:1\tA\tA[8:39908128[\t27\tPASS\tEVDNC=ASSMB;HOMSEQ=AAGAAATAATATTTAA;MAPQ=60;MATEID=450065:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_39886001_39911001_16C;SPAN=317;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:20:20.9:27.5,0,20.9:10:0:-27.41:27.41\n8\t39908128\t450065:2\tA\t]8:39907811]A\t27\tPASS\tEVDNC=ASSMB;HOMSEQ=AAGAAATAATATTTAA;MAPQ=60;MATEID=450065:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_39886001_39911001_16C;SPAN=317;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:20:20.9:27.5,0,20.9:10:0:-27.41:27.41\n8\t40279424\t450329:1\tT\t]8:40531710]T\t36\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TG;MAPQ=60;MATEID=450329:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_40523001_40548001_104C;SPAN=252286;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:12:12:3.3:36.3,3.3,0:8:8:-36.31:36.31\n8\t40432188\t450269:1\tA\tA[8:40438679[\t46\tPASS\tEVDNC=ASSMB;HOMSEQ=AAAAAAATACACAGGA;MAPQ=60;MATEID=450269:2;MATENM=0;NM=3;NUMPARTS=2;SCTG=c_8_40425001_40450001_119C;SPAN=6491;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:15:15:4.2:46.2,4.2,0:15:0:-46.21:46.21\n8\t40438679\t450269:2\tA\t]8:40432188]A\t46\tPASS\tEVDNC=ASSMB;HOMSEQ=AAAAAAATACACAGGA;MAPQ=60;MATEID=450269:1;MATENM=3;NM=0;NUMPARTS=2;SCTG=c_8_40425001_40450001_119C;SPAN=6491;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:15:15:4.2:46.2,4.2,0:15:0:-46.21:46.21\n8\t40531710\t450329:2\tG\tG[8:40279424[\t36\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TG;MAPQ=60;MATEID=450329:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_40523001_40548001_104C;SPAN=252286;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:12:12:3.3:36.3,3.3,0:8:8:-36.31:36.31\n8\t42332967\t450872:1\tC\tC[8:42336835[\t66\tPASS\tDISC_MAPQ=54;EVDNC=ASDIS;HOMSEQ=CCTGTAATCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATCGCTTGAACCCGGGAGGCAGAGGTTGCAGTGAGCCGAGATCGTGCCATTGCACTCC;MAPQ=60;MATEID=450872:2;MATENM=3;NM=5;NUMPARTS=2;SCTG=c_8_42336001_42361001_31C;SPAN=3868;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:22:1:6:66,6,0:9:14:-66.02:66.02\n8\t42336835\t450872:2\tC\t]8:42332967]C\t66\tPASS\tDISC_MAPQ=59;EVDNC=ASDIS;HOMSEQ=CCTGTAATCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATCGCTTGAACCCGGGAGGCAGAGGTTGCAGTGAGCCGAGATCGTGCCATTGCACTCC;MAPQ=60;MATEID=450872:1;MATENM=5;NM=3;NUMPARTS=2;SCTG=c_8_42336001_42361001_31C;SPAN=3868;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:22:1:6:66,6,0:9:14:-66.02:66.02\n8\t43588080\t734367:1\tC\t[15:62731836[C\t49\tPASS\tDISC_MAPQ=53;EVDNC=ASDIS;HOMSEQ=CC;MAPQ=60;MATEID=734367:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_15_62720001_62745001_57C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:16:19:1.8:49.5,1.8,0:11:8:-50.34:50.34\n8\t43776203\t451387:1\tT\t]8:43780756]T\t44\tPASS\tEVDNC=ASSMB;HOMSEQ=TTCTTTGGATTCAGCAGATTGGAAACACTCTTT;MAPQ=60;MATEID=451387:2;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_8_43757001_43782001_13C;SPAN=4553;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:16:32:34.1:44,0,34.1:16:0:-43.85:43.85\n8\t43780756\t451387:2\tT\tT[8:43776203[\t44\tPASS\tEVDNC=ASSMB;HOMSEQ=TTCTTTGGATTCAGCAGATTGGAAACACTCTTT;MAPQ=60;MATEID=451387:1;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_8_43757001_43782001_13C;SPAN=4553;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:16:32:34.1:44,0,34.1:16:0:-43.85:43.85\n8\t46080001\t451746:1\tT\tT[8:46080812[\t36\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TTCTTTTGATTCAACAGGTTGGAAACACTTTTTTTGTAGAAT;MAPQ=60;MATEID=451746:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_46060001_46085001_11C;SPAN=811;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:12:14:0.6:36.3,0.6,0:8:6:-38:38\n8\t46080812\t451746:2\tT\t]8:46080001]T\t36\tPASS\tDISC_MAPQ=53;EVDNC=ASDIS;HOMSEQ=TTCTTTTGATTCAACAGGTTGGAAACACTTTTTTTGTAGAAT;MAPQ=60;MATEID=451746:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_46060001_46085001_11C;SPAN=811;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:12:14:0.6:36.3,0.6,0:8:6:-38:38\n8\t46469698\t451798:1\tT\tT[8:46470019[\t55\tPASS\tEVDNC=ASSMB;HOMSEQ=CTTTCTAGCTTTT;MAPQ=60;MATEID=451798:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_46452001_46477001_68C;SPAN=321;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:19:25:6.2:55.7,0,6.2:19:0:-57.84:57.84\n8\t46470019\t451798:2\tC\t]8:46469698]C\t55\tPASS\tEVDNC=ASSMB;HOMSEQ=CTTTCTAGCTTTT;MAPQ=60;MATEID=451798:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_46452001_46477001_68C;SPAN=321;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:19:25:6.2:55.7,0,6.2:19:0:-57.84:57.84\n8\t46494290\t451803:1\tA\tA[8:46496276[\t29\tPASS\tDISC_MAPQ=55;EVDNC=DSCRD;IMPRECISE;MAPQ=55;MATEID=451803:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=8:46494290(+)-8:46496276(-)__8_46476501_46501501D;SPAN=1986;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:10:9:2.7:29.7,2.7,0:0:10:-29.71:29.71\n8\t46496276\t451803:2\tA\t]8:46494290]A\t29\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=451803:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=8:46494290(+)-8:46496276(-)__8_46476501_46501501D;SPAN=1986;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:10:9:2.7:29.7,2.7,0:0:10:-29.71:29.71\n8\t48174013\t999226:1\tT\tT[Un_JTFH01000836v1_decoy:1[\t49\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=999226:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1679_1_1109_1C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:17:5:4.5:49.5,4.5,0:17:0:-49.51:49.51\n8\t48174013\t452062:1\tT\tT[Un_JTFH01000836v1_decoy:1[\t55\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=452062:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_48167001_48192001_57C;SPAN=-1;SUBN=1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:19:27:12.2:55.1,0,12.2:19:0:-56.6:56.6\n8\t48180826\t452065:1\tG\tG[8:48181419[\t28\tPASS\tEVDNC=ASSMB;HOMSEQ=G;MAPQ=60;MATEID=452065:2;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_8_48167001_48192001_123C;SPAN=593;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:16:8.9:28.7,0,8.9:10:0:-28.89:28.89\n8\t48181419\t452065:2\tG\t]8:48180826]G\t28\tPASS\tEVDNC=ASSMB;HOMSEQ=G;MAPQ=60;MATEID=452065:1;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_8_48167001_48192001_123C;SPAN=593;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:16:8.9:28.7,0,8.9:10:0:-28.89:28.89\n8\t49713404\t987218:1\tT\tT[Un_KN707628v1_decoy:1[\t46\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=987218:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_479_1_2960_3C;SPAN=-1;SUBN=1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:15:4:4.2:46.2,4.2,0:15:0:-46.21:46.21\n8\t50118594\t452481:1\tC\tC[8:50125769[\t46\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=452481:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=8:50118594(+)-8:50125769(-)__8_50102501_50127501D;SPAN=7175;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:16:2:4.2:46.2,4.2,0:0:16:-46.21:46.21\n8\t50125769\t452481:2\tT\t]8:50118594]T\t46\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=452481:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=8:50118594(+)-8:50125769(-)__8_50102501_50127501D;SPAN=7175;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:16:2:4.2:46.2,4.2,0:0:16:-46.21:46.21\n8\t50839986\t452617:1\tA\tA[8:50840180[\t19\tPASS\tEVDNC=ASSMB;HOMSEQ=A;MAPQ=60;MATEID=452617:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_50837501_50862501_21C;SPAN=194;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:7:14:15.8:19.1,0,15.8:7:0:-19.19:19.19\n8\t50840180\t452617:2\tA\t]8:50839986]A\t19\tPASS\tEVDNC=ASSMB;HOMSEQ=A;MAPQ=60;MATEID=452617:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_50837501_50862501_21C;SPAN=194;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:7:14:15.8:19.1,0,15.8:7:0:-19.19:19.19\n8\t51817582\t452806:1\tC\t]11:38791187]C\t49\tPASS\tDISC_MAPQ=59;EVDNC=DSCRD;IMPRECISE;MAPQ=59;MATEID=452806:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=8:51817582(-)-11:38791187(+)__8_51817501_51842501D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:17:13:4.5:49.5,4.5,0:0:17:-49.51:49.51\n8\t51819021\t452809:1\tA\tA[11:38791106[\t82\tPASS\tDISC_MAPQ=49;EVDNC=DSCRD;IMPRECISE;MAPQ=49;MATEID=452809:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=8:51819021(+)-11:38791106(-)__8_51817501_51842501D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:27:10:7.5:82.5,7.5,0:0:27:-82.52:82.52\n8\t59222847\t454429:1\tT\t]8:59224226]T\t49\tPASS\tDISC_MAPQ=56;EVDNC=DSCRD;IMPRECISE;MAPQ=56;MATEID=454429:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=8:59222847(-)-8:59224226(+)__8_59216501_59241501D;SPAN=1379;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:17:17:4.5:49.5,4.5,0:0:17:-49.51:49.51\n8\t59224226\t454429:2\tA\tA[8:59222847[\t49\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=454429:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=8:59222847(-)-8:59224226(+)__8_59216501_59241501D;SPAN=1379;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:17:17:4.5:49.5,4.5,0:0:17:-49.51:49.51\n8\t62017592\t454978:1\tT\tT[8:62017897[\t36\tPASS\tEVDNC=ASSMB;HOMSEQ=ATATTCTT;MAPQ=60;MATEID=454978:2;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_8_62009501_62034501_28C;SPAN=305;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:12:11:3.3:36.3,3.3,0:12:0:-36.31:36.31\n8\t62017897\t454978:2\tA\t]8:62017592]A\t36\tPASS\tEVDNC=ASSMB;HOMSEQ=ATATTCTT;MAPQ=60;MATEID=454978:1;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_8_62009501_62034501_28C;SPAN=305;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:12:11:3.3:36.3,3.3,0:12:0:-36.31:36.31\n8\t62346646\t455114:1\tG\tG[8:62350676[\t42\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TGAG;MAPQ=60;MATEID=455114:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_8_62328001_62353001_14C;SPAN=4030;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:14:13:3.9:42.9,3.9,0:9:9:-42.91:42.91\n8\t62350676\t455114:2\tT\t]8:62346646]T\t42\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TGAG;MAPQ=60;MATEID=455114:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_8_62328001_62353001_14C;SPAN=4030;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:14:13:3.9:42.9,3.9,0:9:9:-42.91:42.91\n8\t63059041\t504759:1\tT\t]9:90432262]T\t25\tPASS\tDISC_MAPQ=255;EVDNC=TSI_G;HOMSEQ=TTTTTTTTTGAGACGG;INSERTION=TTTTTTGTTGTTGTTG;MAPQ=60;MATEID=504759:2;MATENM=2;NM=0;NUMPARTS=3;SCTG=c_9_90429501_90454501_9C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:28:25.1:25.1,0,44.9:10:0:-25.14:25.46\n8\t67227171\t456003:1\tC\t]8:67247201]C\t47\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=456003:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_67228001_67253001_3C;SPAN=20030;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:16:20:1.1:47.3,0,1.1:16:0:-49.48:49.48\n8\t67247201\t456003:2\tT\tT[8:67227171[\t47\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=456003:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_67228001_67253001_3C;SPAN=20030;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:16:20:1.1:47.3,0,1.1:16:0:-49.48:49.48\n8\t70380126\t456829:1\tA\t]8:70404842]A\t39\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AA;MAPQ=60;MATEID=456829:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_70388501_70413501_9C;SPAN=24716;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:12:13:3.6:39.6,3.6,0:10:7:-39.28:39.28\n8\t70404842\t456829:2\tA\tA[8:70380126[\t39\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AA;MAPQ=60;MATEID=456829:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_70388501_70413501_9C;SPAN=24716;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:12:13:3.6:39.6,3.6,0:10:7:-39.28:39.28\n8\t70671447\t456910:1\tA\tA[8:70672408[\t92\tPASS\tDISC_MAPQ=59;EVDNC=DSCRD;IMPRECISE;MAPQ=59;MATEID=456910:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=8:70671447(+)-8:70672408(-)__8_70658001_70683001D;SPAN=961;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:31:16:8.4:92.4,8.4,0:0:31:-92.42:92.42\n8\t70672408\t456910:2\tT\t]8:70671447]T\t92\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=456910:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=8:70671447(+)-8:70672408(-)__8_70658001_70683001D;SPAN=961;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:31:16:8.4:92.4,8.4,0:0:31:-92.42:92.42\n8\t71639183\t457174:1\tC\tC[8:71639505[\t26\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=GTTTCACTATATC;MAPQ=60;MATEID=457174:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_71638001_71663001_110C;SPAN=322;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:22:26.9:26.9,0,26.9:5:5:-26.83:26.83\n8\t71639505\t457174:2\tG\t]8:71639183]G\t26\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=GTTTCACTATATC;MAPQ=60;MATEID=457174:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_71638001_71663001_110C;SPAN=322;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:22:26.9:26.9,0,26.9:5:5:-26.83:26.83\n8\t72488218\t457496:1\tA\t]8:72492038]A\t31\tPASS\tEVDNC=ASSMB;INSERTION=AGG;MAPQ=60;MATEID=457496:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_72471001_72496001_0C;SPAN=3820;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:31:31.1:31.1,0,44.3:12:0:-30.9:31.08\n8\t72492038\t457496:2\tT\tT[8:72488218[\t31\tPASS\tEVDNC=ASSMB;INSERTION=AGG;MAPQ=60;MATEID=457496:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_72471001_72496001_0C;SPAN=3820;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:31:31.1:31.1,0,44.3:12:0:-30.9:31.08\n8\t72874467\t164465:2\tA\tA]3:62586884]\t0\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TA;MAPQ=60;MATEID=164465:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_62573001_62598001_0C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/0:6:89:5.1:0,5.1,234.3:4:3:5.211:10.46\n8\t72875540\t457568:1\tT\tT[8:72881589[\t15\tPASS\tEVDNC=ASSMB;HOMSEQ=TGCAAATCTT;MAPQ=60;MATEID=457568:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_72863001_72888001_19C;SPAN=6049;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:7:26:15.8:15.8,0,48.8:7:0:-15.8:16.78\n8\t72881589\t457568:2\tT\t]8:72875540]T\t15\tPASS\tEVDNC=ASSMB;HOMSEQ=TGCAAATCTT;MAPQ=60;MATEID=457568:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_72863001_72888001_19C;SPAN=6049;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:7:26:15.8:15.8,0,48.8:7:0:-15.8:16.78\n8\t74964713\t458158:1\tT\tT[8:74965030[\t40\tPASS\tEVDNC=ASSMB;HOMSEQ=TCTGTTTCTT;MAPQ=60;MATEID=458158:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_74945501_74970501_88C;SPAN=317;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:21:10.7:40.4,0,10.7:14:0:-41.11:41.11\n8\t74965030\t458158:2\tT\t]8:74964713]T\t40\tPASS\tEVDNC=ASSMB;HOMSEQ=TCTGTTTCTT;MAPQ=60;MATEID=458158:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_74945501_74970501_88C;SPAN=317;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:21:10.7:40.4,0,10.7:14:0:-41.11:41.11\n8\t78551616\t469227:1\tA\t[8:109495685[A\t58\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AT;MAPQ=60;MATEID=469227:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_109490501_109515501_42C;SPAN=30944069;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:21:38:35.6:58.7,0,35.6:14:12:-58.9:58.9\n8\t78595007\t459008:2\tT\tT[4:124019638[\t49\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AT;MAPQ=60;MATEID=459008:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_78571501_78596501_14C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:15:17:4.5:49.5,4.5,0:12:8:-48.04:48.04\n8\t84953160\t460774:1\tT\tT]8:84961920]\t24\tPASS\tDISC_MAPQ=36;EVDNC=DSCRD;IMPRECISE;MAPQ=36;MATEID=460774:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=8:84953160(+)-8:84961920(+)__8_84941501_84966501D;SPAN=8760;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:32:24.2:24.2,0,53.9:0:10:-24.02:24.74\n8\t84961920\t460774:2\tG\tG]8:84953160]\t24\tPASS\tDISC_MAPQ=51;EVDNC=DSCRD;IMPRECISE;MAPQ=51;MATEID=460774:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=8:84953160(+)-8:84961920(+)__8_84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Q=59;MATEID=463125:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=8:93654319(+)-19:9167128(-)__8_93639001_93664001D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:21:10:5.7:62.7,5.7,0:0:21:-62.72:62.72\n8\t95863000\t463991:1\tT\tT[8:95867363[\t47\tPASS\tEVDNC=ASSMB;HOMSEQ=CAT;MAPQ=60;MATEID=463991:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_95844001_95869001_11C;SPAN=4363;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:17:29:24.8:47.9,0,24.8:17:0:-48.35:48.35\n8\t95867363\t463991:2\tC\t]8:95863000]C\t47\tPASS\tEVDNC=ASSMB;HOMSEQ=CAT;MAPQ=60;MATEID=463991:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_95844001_95869001_11C;SPAN=4363;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:17:29:24.8:47.9,0,24.8:17:0:-48.35:48.35\n8\t96085860\t464075:1\tA\tA[8:96086198[\t55\tPASS\tEVDNC=ASSMB;HOMSEQ=GAAAGAGAGGTATTA;MAPQ=60;MATEID=464075:2;MATENM=5;NM=0;NUMPARTS=2;SCTG=c_8_96064501_96089501_8C;SPAN=338;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:31:168:55.3:55.3,0,365.6:31:0:-55.11:68.49\n8\t96086198\t464075:2\tG\t]8:96085860]G\t55\tPASS\tEVDNC=ASSMB;HOMSEQ=GAAAGAGAGGTATTA;MAPQ=60;MATEID=464075:1;MATENM=0;NM=5;NUMPARTS=2;SCTG=c_8_96064501_96089501_8C;SPAN=338;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:31:168:55.3:55.3,0,365.6:31:0:-55.11:68.49\n8\t96173027\t464091:2\tC\t]4:139694008]C\t31\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=464091:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_96162501_96187501_54C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:17:8.6:31.7,0,8.6:11:0:-32.06:32.06\n8\t96174456\t464088:2\tA\tA[4:116722508[\t44\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;MAPQ=60;MATEID=464088:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_96162501_96187501_12C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:16:28:25.1:44.9,0,25.1:10:11:-45.23:45.23\n8\t97583181\t464420:1\tT\tT[8:97583504[\t99\tPASS\tEVDNC=ASSMB;HOMSEQ=AAAAATAATAAATTTTT;MAPQ=60;MATEID=464420:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_97583501_97608501_87C;SPAN=323;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:38:12:10.5:115.5,10.5,0:38:0:-115.5:115.5\n8\t97583504\t464420:2\tA\t]8:97583181]A\t99\tPASS\tEVDNC=ASSMB;HOMSEQ=AAAAATAATAAATTTTT;MAPQ=60;MATEID=464420:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_97583501_97608501_87C;SPAN=323;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:38:12:10.5:115.5,10.5,0:38:0:-115.5:115.5\n8\t98214711\t464688:2\tG\tG]4:141260902]\t27\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;INSERTION=AA;MAPQ=60;MATEID=464688:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_98196001_98221001_19C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:21:23.9:27.2,0,23.9:9:2:-27.11:27.11\n8\t98919076\t464913:1\tC\t]8:99035533]C\t22\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=464913:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=8:98919076(-)-8:99035533(+)__8_99029001_99054001D;SPAN=116457;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:26:22.4:22.4,0,42.2:0:9:-22.4:22.76\n8\t99035533\t464913:2\tA\tA[8:98919076[\t22\tPASS\tDISC_MAPQ=56;EVDNC=DSCRD;IMPRECISE;MAPQ=56;MATEID=464913:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=8:98919076(-)-8:99035533(+)__8_99029001_99054001D;SPAN=116457;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:26:22.4:22.4,0,42.2:0:9:-22.4:22.76\n8\t100064021\t882837:1\tT\t]20:47782526]T\t63\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;MAPQ=60;MATEID=882837:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_47775001_47800001_26C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:29:116:63.2:63.2,0,228.2:20:27:-63.12:68.41\n8\t101325742\t465752:1\tT\t]8:101488146]T\t18\tPASS\tEVDNC=ASSMB;HOMSEQ=TTT;MAPQ=60;MATEID=465752:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_101307501_101332501_6C;SPAN=162404;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:39:18.8:18.8,0,78.2:9:0:-18.75:20.87\n8\t101448776\t465866:1\tT\t]8:101540338]T\t52\tPASS\tEVDNC=ASSMB;HOMSEQ=TTA;MAPQ=60;MATEID=465866:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_101528001_101553001_15C;SPAN=91562;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:21:60:52.4:52.4,0,98.6:21:0:-52.46:53.23\n8\t101488146\t465752:2\tT\tT[8:101325742[\t18\tPASS\tEVDNC=ASSMB;HOMSEQ=TTT;MAPQ=60;MATEID=465752:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_101307501_101332501_6C;SPAN=162404;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:39:18.8:18.8,0,78.2:9:0:-18.75:20.87\n8\t101540338\t465866:2\tA\tA[8:101448776[\t52\tPASS\tEVDNC=ASSMB;HOMSEQ=TTA;MAPQ=60;MATEID=465866:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_101528001_101553001_15C;SPAN=91562;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:21:60:52.4:52.4,0,98.6:21:0:-52.46:53.23\n8\t102423273\t466221:1\tA\tA]8:102423778]\t82\tPASS\tDISC_MAPQ=57;EVDNC=ASDIS;HOMSEQ=TAGCTGGGATTAC;MAPQ=60;MATEID=466221:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_102410001_102435001_106C;SPAN=505;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:29:47:33.2:82.7,0,33.2:17:21:-83.52:83.52\n8\t102423778\t466221:2\tC\tC]8:102423273]\t82\tPASS\tDISC_MAPQ=52;EVDNC=ASDIS;HOMSEQ=TAGCTGGGATTAC;MAPQ=60;MATEID=466221:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_102410001_102435001_106C;SPAN=505;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:29:47:33.2:82.7,0,33.2:17:21:-83.52:83.52\n8\t103749080\t466883:1\tT\tT[8:103749364[\t1\tPASS\tEVDNC=ASSMB;HOMSEQ=GGCCTCCCAAAGTGCTGGGATTACAGGCAT;MAPQ=36;MATEID=466883:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_103733001_103758001_111C;SPAN=284;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:5:53:1.7:1.7,0,130.4:5:0:-1.607:9.478\n8\t103749364\t466883:2\tG\t]8:103749080]G\t1\tPASS\tEVDNC=ASSMB;HOMSEQ=GGCCTCCCAAAGTGCTGGGATTACAGGCAT;MAPQ=60;MATEID=466883:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_103733001_103758001_111C;SPAN=284;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:5:53:1.7:1.7,0,130.4:5:0:-1.607:9.478\n8\t103833107\t510495:1\tT\tT[9:109410883[\t32\tPASS\tEVDNC=ASSMB;INSERTION=GCATTTTTT;MAPQ=60;MATEID=510495:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_109392501_109417501_62C;SPAN=-1;SUBN=4;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:25:29.3:32.6,0,29.3:12:0:-32.59:32.59\n8\t103863624\t427546:2\tT\t]7:133435161]T\t42\tPASS\tEVDNC=ASSMB;HOMSEQ=TTA;MAPQ=60;MATEID=427546:1;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_7_133427001_133452001_4C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:14:13:3.9:42.9,3.9,0:14:0:-42.91:42.91\n8\t104467414\t467167:1\tC\t]8:104538330]C\t12\tPASS\tEVDNC=ASSMB;HOMSEQ=CCCA;MAPQ=60;MATEID=467167:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_104517001_104542001_2C;SPAN=70916;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:7:39:12.2:12.2,0,84.8:7:0:-12.14:15.37\n8\t104538330\t467167:2\tA\tA[8:104467414[\t12\tPASS\tEVDNC=ASSMB;HOMSEQ=CCCA;MAPQ=60;MATEID=467167:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_104517001_104542001_2C;SPAN=70916;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:7:39:12.2:12.2,0,84.8:7:0:-12.14:15.37\n8\t105955934\t467732:1\tA\tA[8:105956892[\t24\tPASS\tDISC_MAPQ=34;EVDNC=ASDIS;HOMSEQ=AAA;MAPQ=47;MATEID=467732:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_105938001_105963001_27C;SPAN=958;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:66:24.5:24.5,0,140:9:8:-24.36:29.13\n8\t105956892\t467732:2\tA\t]8:105955934]A\t24\tPASS\tDISC_MAPQ=50;EVDNC=ASDIS;HOMSEQ=AAA;MAPQ=60;MATEID=467732:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_105938001_105963001_27C;SPAN=958;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:66:24.5:24.5,0,140:9:8:-24.36:29.13\n8\t106040326\t467745:1\tA\tA[8:106040600[\t99\tPASS\tEVDNC=ASSMB;INSERTION=A;MAPQ=60;MATEID=467745:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_106036001_106061001_27C;SPAN=274;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:41:51:5.6:121.1,0,5.6:41:0:-127:127\n8\t106040600\t467745:2\tC\t]8:106040326]C\t99\tPASS\tEVDNC=ASSMB;INSERTION=A;MAPQ=60;MATEID=467745:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_106036001_106061001_27C;SPAN=274;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:41:51:5.6:121.1,0,5.6:41:0:-127:127\n8\t106498881\t467953:1\tG\tG[8:106499191[\t99\tPASS\tEVDNC=ASSMB;HOMSEQ=AAAGAATTAGGAGATG;MAPQ=60;MATEID=467953:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_106477001_106502001_118C;SPAN=310;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:49:34:13.5:148.5,13.5,0:49:0:-148.5:148.5\n8\t106499191\t467953:2\tA\t]8:106498881]A\t99\tPASS\tEVDNC=ASSMB;HOMSEQ=AAAGAATTAGGAGATG;MAPQ=60;MATEID=467953:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_106477001_106502001_118C;SPAN=310;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:49:34:13.5:148.5,13.5,0:49:0:-148.5:148.5\n8\t107108006\t468214:1\tG\tG[8:107108310[\t65\tPASS\tEVDNC=ASSMB;HOMSEQ=AAGAATGCATGAACATTGG;MAPQ=60;MATEID=468214:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_107089501_107114501_16C;SPAN=304;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:23:37:26:65.6,0,26:23:0:-66.36:66.36\n8\t107108310\t468214:2\tA\t]8:107108006]A\t65\tPASS\tEVDNC=ASSMB;HOMSEQ=AAGAATGCATGAACATTGG;MAPQ=60;MATEID=468214:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_107089501_107114501_16C;SPAN=304;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:23:37:26:65.6,0,26:23:0:-66.36:66.36\n8\t107368493\t468346:1\tT\tT[8:107368851[\t71\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TATTCCTTATACTTATTTATAAGTATATTCCTTATACTTATTT;MAPQ=60;MATEID=468346:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_8_107359001_107384001_126C;SPAN=358;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:25:41:31.4:71,0,31.4:15:15:-71.79:71.79\n8\t107368851\t468346:2\tT\t]8:107368493]T\t71\tPASS\tDISC_MAPQ=58;EVDNC=ASDIS;HOMSEQ=TATTCCTTATACTTATTTATAAGTATATTCCTTATACTTATTT;MAPQ=60;MATEID=468346:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_8_107359001_107384001_126C;SPAN=358;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:25:41:31.4:71,0,31.4:15:15:-71.79:71.79\n8\t107612139\t468511:1\tA\t]8:107622099]A\t2\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=ACA;MAPQ=60;MATEID=468511:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_107604001_107629001_103C;SPAN=9960;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:96:2.9:2.9,0,237.2:2:9:-2.724:17.03\n8\t107622099\t468511:2\tA\tA[8:107612139[\t2\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=ACA;MAPQ=60;MATEID=468511:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_107604001_107629001_103C;SPAN=9960;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:96:2.9:2.9,0,237.2:2:9:-2.724:17.03\n8\t107769184\t468586:1\tG\tG[8:107770194[\t86\tPASS\tEVDNC=ASSMB;INSERTION=GAGCATTCAT;MAPQ=60;MATEID=468586:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_8_107751001_107776001_95C;SPAN=1010;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:30:47:29.9:86,0,29.9:30:0:-87.13:87.13\n8\t107770194\t468586:2\tG\t]8:107769184]G\t86\tPASS\tEVDNC=ASSMB;INSERTION=GAGCATTCAT;MAPQ=60;MATEID=468586:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_8_107751001_107776001_95C;SPAN=1010;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:30:47:29.9:86,0,29.9:30:0:-87.13:87.13\n8\t108717946\t468836:1\tT\tT[8:108718258[\t99\tPASS\tEVDNC=ASSMB;HOMSEQ=CTGACTTAGGTTTT;MAPQ=60;MATEID=468836:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_108706501_108731501_74C;SPAN=312;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:33:36:9.9:108.9,9.9,0:33:0:-107.6:107.6\n8\t108718258\t468836:2\tC\t]8:108717946]C\t99\tPASS\tEVDNC=ASSMB;HOMSEQ=CTGACTTAGGTTTT;MAPQ=60;MATEID=468836:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_108706501_108731501_74C;SPAN=312;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:33:36:9.9:108.9,9.9,0:33:0:-107.6:107.6\n8\t108770582\t468851:2\tA\tA[4:111438522[\t15\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=468851:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=4:111438522(-)-8:108770582(+)__8_108755501_108780501D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:50:15.8:15.8,0,108.2:0:9:-15.65:19.78\n8\t109065134\t469005:1\tA\t]8:109065246]A\t99\tPASS\tEVDNC=ASSMB;HOMSEQ=ATA;MAPQ=60;MATEID=469005:2;MATENM=4;NM=1;NUMPARTS=2;SCTG=c_8_109049501_109074501_87C;SPAN=112;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:44:100:99:117.2,0,133.7:44:0:-117.1:117.2\n8\t109065246\t469005:2\tA\tA[8:109065134[\t99\tPASS\tEVDNC=ASSMB;HOMSEQ=ATA;MAPQ=60;MATEID=469005:1;MATENM=1;NM=4;NUMPARTS=2;SCTG=c_8_109049501_109074501_87C;SPAN=112;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:44:100:99:117.2,0,133.7:44:0:-117.1:117.2\n8\t109222490\t469108:1\tC\tC[8:109222824[\t99\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=469108:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_8_109221001_109246001_68C;SPAN=334;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:35:54:34.4:100.4,0,34.4:35:0:-102:102\n8\t109222824\t469108:2\tA\t]8:109222490]A\t99\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=469108:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_8_109221001_109246001_68C;SPAN=334;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:35:54:34.4:100.4,0,34.4:35:0:-102:102\n8\t109495685\t469227:2\tA\t[8:78551616[A\t58\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AT;MAPQ=60;MATEID=469227:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_109490501_109515501_42C;SPAN=30944069;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:21:38:35.6:58.7,0,35.6:14:12:-58.9:58.9\n8\t109498091\t469232:1\tT\tT[8:109498401[\t80\tPASS\tEVDNC=ASSMB;HOMSEQ=CATGTTTTCTTTT;MAPQ=60;MATEID=469232:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_109490501_109515501_26C;SPAN=310;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:28:43:27.5:80.3,0,27.5:28:0:-81.73:81.73\n8\t109498401\t469232:2\tC\t]8:109498091]C\t80\tPASS\tEVDNC=ASSMB;HOMSEQ=CATGTTTTCTTTT;MAPQ=60;MATEID=469232:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_109490501_109515501_26C;SPAN=310;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:28:43:27.5:80.3,0,27.5:28:0:-81.73:81.73\n8\t109517001\t469240:2\tA\tA[4:122720683[\t28\tPASS\tEVDNC=ASSMB;HOMSEQ=A;MAPQ=60;MATEID=469240:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_109515001_109540001_59C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:53:28.1:28.1,0,104:13:0:-28.02:30.54\n8\t111281823\t469836:1\tG\tG[8:111284911[\t86\tPASS\tEVDNC=ASSMB;HOMSEQ=G;MAPQ=60;MATEID=469836:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_111279001_111304001_53C;SPAN=3088;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:31:56:53.6:86.6,0,53.6:31:0:-86.98:86.98\n8\t111284911\t469836:2\tG\t]8:111281823]G\t86\tPASS\tEVDNC=ASSMB;HOMSEQ=G;MAPQ=60;MATEID=469836:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_111279001_111304001_53C;SPAN=3088;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:31:56:53.6:86.6,0,53.6:31:0:-86.98:86.98\n8\t111355427\t473012:1\tT\tT[8:120549876[\t44\tPASS\tEVDNC=ASSMB;HOMSEQ=TT;MAPQ=60;MATEID=473012:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_120540001_120565001_41C;SPAN=9194449;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:16:32:34.1:44,0,34.1:16:0:-43.85:43.85\n8\t113044266\t470428:1\tG\tG[8:113046544[\t99\tPASS\tEVDNC=ASSMB;HOMSEQ=ATG;MAPQ=60;MATEID=470428:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_113043001_113068001_9C;SPAN=2278;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:42:35:11.7:128.7,11.7,0:42:0:-128.7:128.7\n8\t113046544\t470428:2\tA\t]8:113044266]A\t99\tPASS\tEVDNC=ASSMB;HOMSEQ=ATG;MAPQ=60;MATEID=470428:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_113043001_113068001_9C;SPAN=2278;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:42:35:11.7:128.7,11.7,0:42:0:-128.7:128.7\n8\t114067086\t470703:1\tC\tC[8:114068448[\t99\tPASS\tEVDNC=ASSMB;INSERTION=CAG;MAPQ=60;MATEID=470703:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_114047501_114072501_183C;SPAN=1362;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:43:32:12:132,12,0:43:0:-132:132\n8\t114068448\t470703:2\tA\t]8:114067086]A\t99\tPASS\tEVDNC=ASSMB;INSERTION=CAG;MAPQ=60;MATEID=470703:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_114047501_114072501_183C;SPAN=1362;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:43:32:12:132,12,0:43:0:-132:132\n8\t114245422\t470781:1\tC\tC[8:114246294[\t22\tPASS\tDISC_MAPQ=32;EVDNC=ASDIS;HOMSEQ=TCC;MAPQ=60;MATEID=470781:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_114243501_114268501_42C;SPAN=872;SUBN=1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:49:22.7:22.7,0,98.6:10:2:-22.54:25.36\n8\t114246294\t470781:2\tT\t]8:114245422]T\t22\tPASS\tDISC_MAPQ=20;EVDNC=ASDIS;HOMSEQ=TCC;MAPQ=60;MATEID=470781:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_114243501_114268501_42C;SPAN=872;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:49:22.7:22.7,0,98.6:10:2:-22.54:25.36\n8\t115476006\t471204:1\tT\tT[8:115476319[\t32\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=CAGAAAATATACTTTCT;MAPQ=60;MATEID=471204:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_115468501_115493501_69C;SPAN=313;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:36:32.9:32.9,0,56:8:6:-32.79:33.17\n8\t115476319\t471204:2\tC\t]8:115476006]C\t32\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=CAGAAAATATACTTTCT;MAPQ=60;MATEID=471204:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_115468501_115493501_69C;SPAN=313;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:36:32.9:32.9,0,56:8:6:-32.79:33.17\n8\t117667362\t471947:2\tT\t[2:125013432[T\t92\tPASS\tDISC_MAPQ=27;EVDNC=ASDIS;INSERTION=AAATAAAAT;MAPQ=0;MATEID=471947:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_117649001_117674001_5C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:31:26:8.4:92.4,8.4,0:27:7:-92.42:92.42\n8\t117968533\t472068:1\tA\tA[8:117968870[\t91\tPASS\tEVDNC=ASSMB;HOMSEQ=ATTCTGCCTTATTTA;MAPQ=60;MATEID=472068:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_8_117967501_117992501_107C;SPAN=337;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:31:40:8.6:91.1,0,8.6:31:0:-94.93:94.93\n8\t117968870\t472068:2\tA\t]8:117968533]A\t91\tPASS\tEVDNC=ASSMB;HOMSEQ=ATTCTGCCTTATTTA;MAPQ=60;MATEID=472068:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_8_117967501_117992501_107C;SPAN=337;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:31:40:8.6:91.1,0,8.6:31:0:-94.93:94.93\n8\t120321170\t472949:1\tG\t]8:120378583]G\t15\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=472949:2;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_8_120368501_120393501_35C;SPAN=57413;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:7:26:15.8:15.8,0,48.8:7:0:-15.8:16.78\n8\t120378583\t472949:2\tC\tC[8:120321170[\t15\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=472949:1;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_8_120368501_120393501_35C;SPAN=57413;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:7:26:15.8:15.8,0,48.8:7:0:-15.8:16.78\n8\t120549876\t473012:2\tT\t]8:111355427]T\t44\tPASS\tEVDNC=ASSMB;HOMSEQ=TT;MAPQ=60;MATEID=473012:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_120540001_120565001_41C;SPAN=9194449;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:16:32:34.1:44,0,34.1:16:0:-43.85:43.85\n8\t120669445\t473069:1\tT\tT[8:120669752[\t99\tPASS\tEVDNC=ASSMB;HOMSEQ=GAAAATGCTTGTT;MAPQ=60;MATEID=473069:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_8_120662501_120687501_107C;SPAN=307;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:36:42:1.8:108.9,1.8,0:36:0:-114:114\n8\t120669752\t473069:2\tG\t]8:120669445]G\t99\tPASS\tEVDNC=ASSMB;HOMSEQ=GAAAATGCTTGTT;MAPQ=60;MATEID=473069:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_8_120662501_120687501_107C;SPAN=307;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:36:42:1.8:108.9,1.8,0:36:0:-114:114\n8\t122286805\t473790:1\tT\t]8:122286919]T\t5\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=473790:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_122279501_122304501_48C;SPAN=114;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:75:5.3:5.3,0,183.5:8:0:-5.326:15.61\n8\t122286919\t473790:2\tC\tC[8:122286805[\t5\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=473790:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_122279501_122304501_48C;SPAN=114;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:75:5.3:5.3,0,183.5:8:0:-5.326:15.61\n8\t122356933\t473874:1\tC\t]8:122460639]C\t30\tPASS\tEVDNC=ASSMB;HOMSEQ=C;MAPQ=60;MATEID=473874:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_122451001_122476001_45C;SPAN=103706;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:32:30.8:30.8,0,47.3:12:0:-30.62:30.87\n8\t122460639\t473874:2\tC\tC[8:122356933[\t30\tPASS\tEVDNC=ASSMB;HOMSEQ=C;MAPQ=60;MATEID=473874:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_122451001_122476001_45C;SPAN=103706;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:32:30.8:30.8,0,47.3:12:0:-30.62:30.87\n8\t124301274\t474613:1\tT\t]8:124311894]T\t9\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=474613:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_124288501_124313501_19C;SPAN=10620;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:61:9.5:9.5,0,141.5:8:0:-9.261:16.38\n8\t124311894\t474613:2\tG\tG[8:124301274[\t9\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=474613:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_124288501_124313501_19C;SPAN=10620;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:61:9.5:9.5,0,141.5:8:0:-9.261:16.38\n8\t124579365\t474755:2\tG\t]8:91552255]G\t18\tPASS\tDISC_MAPQ=60;EVDNC=TSI_L;HOMSEQ=GA;MAPQ=60;MATEID=474755:1;MATENM=0;NM=0;NUMPARTS=3;SCTG=c_8_124558001_124583001_91C;SPAN=33027110;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:39:18.8:18.8,0,78.2:7:5:-18.75:20.87\n8\t125582885\t475223:1\tA\tA[8:125588891[\t99\tPASS\tEVDNC=ASSMB;HOMSEQ=CACTCACA;MAPQ=60;MATEID=475223:2;MATENM=7;NM=0;NUMPARTS=2;SCTG=c_8_125587001_125612001_12C;SPAN=6006;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:47:31:12.9:141.9,12.9,0:47:0:-141.9:141.9\n8\t125588891\t475223:2\tC\t]8:125582885]C\t99\tPASS\tEVDNC=ASSMB;HOMSEQ=CACTCACA;MAPQ=60;MATEID=475223:1;MATENM=0;NM=7;NUMPARTS=2;SCTG=c_8_125587001_125612001_12C;SPAN=6006;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:47:31:12.9:141.9,12.9,0:47:0:-141.9:141.9\n8\t125669145\t475249:1\tT\tT[8:125669463[\t80\tPASS\tEVDNC=ASSMB;HOMSEQ=TCATGTTAATTTTT;MAPQ=60;MATEID=475249:2;MATENM=1;NM=2;NUMPARTS=2;SCTG=c_8_125660501_125685501_80C;SPAN=318;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:28:41:21.5:80.9,0,21.5:28:0:-82.75:82.75\n8\t125669463\t475249:2\tT\t]8:125669145]T\t80\tPASS\tEVDNC=ASSMB;HOMSEQ=TCATGTTAATTTTT;MAPQ=60;MATEID=475249:1;MATENM=2;NM=1;NUMPARTS=2;SCTG=c_8_125660501_125685501_80C;SPAN=318;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:28:41:21.5:80.9,0,21.5:28:0:-82.75:82.75\n8\t126114017\t475363:2\tC\t]4:127522207]C\t20\tPASS\tEVDNC=ASSMB;HOMSEQ=CAT;MAPQ=60;MATEID=475363:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_126101501_126126501_8C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:35:20:20,0,66.2:9:0:-19.87:21.36\n8\t126179961\t475380:1\tC\tC[8:126182328[\t70\tPASS\tEVDNC=ASSMB;INSERTION=T;MAPQ=60;MATEID=475380:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_126175001_126200001_66C;SPAN=2367;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:26:54:64.1:70.7,0,64.1:26:0:-70.66:70.66\n8\t126182328\t475380:2\tA\t]8:126179961]A\t70\tPASS\tEVDNC=ASSMB;INSERTION=T;MAPQ=60;MATEID=475380:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_126175001_126200001_66C;SPAN=2367;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:26:54:64.1:70.7,0,64.1:26:0:-70.66:70.66\n8\t126236711\t475428:1\tT\tT[8:126237039[\t67\tPASS\tEVDNC=ASSMB;INSERTION=AAAACATT;MAPQ=60;MATEID=475428:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_126224001_126249001_170C;SPAN=328;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:25:55:67.1:67.1,0,70.4:25:0:-67.07:67.07\n8\t126237039\t475428:2\tC\t]8:126236711]C\t67\tPASS\tEVDNC=ASSMB;INSERTION=AAAACATT;MAPQ=60;MATEID=475428:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_126224001_126249001_170C;SPAN=328;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:25:55:67.1:67.1,0,70.4:25:0:-67.07:67.07\n8\t126797640\t477799:1\tT\tT]8:131831800]\t79\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TTTCT;MAPQ=60;MATEID=477799:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_131810001_131835001_1C;SPAN=5034160;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:26:31:1.8:79.2,1.8,0:20:8:-81.69:81.69\n8\t127117370\t475747:1\tT\t[8:127118469[T\t26\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=CA;MAPQ=60;MATEID=475747:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_127106001_127131001_15C;SPAN=1099;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:72:26:26,0,154.7:10:6:-25.98:31.28\n8\t127118469\t475747:2\tC\t[8:127117370[C\t26\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=CA;MAPQ=60;MATEID=475747:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_127106001_127131001_15C;SPAN=1099;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:72:26:26,0,154.7:10:6:-25.98:31.28\n8\t127521585\t475914:2\tA\t[3:111555239[A\t99\tPASS\tDISC_MAPQ=57;EVDNC=ASDIS;INSERTION=AAAAAAATAAAAAA;MAPQ=60;MATEID=475914:1;MATENM=0;NM=6;NUMPARTS=2;SCTG=c_8_127498001_127523001_18C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:87:45:24.3:267.3,24.3,0:46:56:-267.4:267.4\n8\t127521605\t475916:2\tA\tA[7:65340142[\t99\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=ATA;MAPQ=60;MATEID=475916:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_127498001_127523001_8C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:36:56:37.1:103.1,0,37.1:34:6:-104.7:104.7\n8\t128092140\t476301:1\tA\t]8:128260292]A\t65\tPASS\tEVDNC=ASSMB;HOMSEQ=A;MAPQ=60;MATEID=476301:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_128257501_128282501_49C;SPAN=168152;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:24:50:58.7:65.3,0,58.7:24:0:-65.18:65.18\n8\t128260292\t476301:2\tA\tA[8:128092140[\t65\tPASS\tEVDNC=ASSMB;HOMSEQ=A;MAPQ=60;MATEID=476301:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_128257501_128282501_49C;SPAN=168152;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:24:50:58.7:65.3,0,58.7:24:0:-65.18:65.18\n8\t128452922\t476384:1\tT\tT[8:128459021[\t99\tPASS\tEVDNC=ASSMB;HOMSEQ=CCAGCTTGTGTTTTT;MAPQ=60;MATEID=476384:2;MATENM=8;NM=1;NUMPARTS=2;SCTG=c_8_128453501_128478501_6C;SPAN=6099;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:66:23:18.3:201.3,18.3,0:66:0:-201.3:201.3\n8\t128459021\t476384:2\tC\t]8:128452922]C\t99\tPASS\tEVDNC=ASSMB;HOMSEQ=CCAGCTTGTGTTTTT;MAPQ=60;MATEID=476384:1;MATENM=1;NM=8;NUMPARTS=2;SCTG=c_8_128453501_128478501_6C;SPAN=6099;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:66:23:18.3:201.3,18.3,0:66:0:-201.3:201.3\n8\t128891244\t476530:1\tA\tA[8:131821933[\t54\tPASS\tEVDNC=ASSMB;INSERTION=TT;MAPQ=60;MATEID=476530:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_128870001_128895001_45C;SPAN=2930689;SUBN=1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:19:29:18.2:54.5,0,18.2:19:0:-55.55:55.55\n8\t129429457\t480935:1\tT\tT[8:140088893[\t20\tPASS\tEVDNC=ASSMB;HOMSEQ=T;MAPQ=60;MATEID=480935:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_140066501_140091501_37C;SPAN=10659436;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:35:20:20,0,66.2:9:0:-19.87:21.36\n8\t129429474\t476707:2\tA\t[4:126064282[A\t40\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=T;MAPQ=60;MATEID=476707:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_129409001_129434001_74C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:15:34:40.1:40.1,0,43.4:13:3:-39.96:39.98\n8\t129429764\t476702:2\tA\tA[4:105671656[\t57\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=A;MAPQ=60;MATEID=476702:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_129409001_129434001_125C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:20:30:17.9:57.5,0,17.9:13:9:-58.74:58.74\n8\t129727754\t476951:1\tG\t]8:129865311]G\t14\tPASS\tEVDNC=ASSMB;HOMSEQ=G;MAPQ=60;MATEID=476951:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_129850001_129875001_17C;SPAN=137557;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:7:30:14.6:14.6,0,60.8:7:0:-14.67:16.27\n8\t129865311\t476951:2\tG\tG[8:129727754[\t14\tPASS\tEVDNC=ASSMB;HOMSEQ=G;MAPQ=60;MATEID=476951:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_129850001_129875001_17C;SPAN=137557;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:7:30:14.6:14.6,0,60.8:7:0:-14.67:16.27\n8\t130535526\t477262:2\tC\t[4:182335217[C\t99\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;MAPQ=60;MATEID=477262:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_130511501_130536501_1C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:38:25:10.5:115.5,10.5,0:27:19:-115.5:115.5\n8\t130722580\t477337:1\tT\tT[8:141644937[\t29\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTT;MAPQ=60;MATEID=477337:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_8_130707501_130732501_91C;SPAN=10922357;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:37:29.3:29.3,0,62.3:12:5:-29.21:29.92\n8\t130897690\t477423:1\tT\t[8:130898322[T\t34\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=477423:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=8:130897690(-)-8:130898322(-)__8_130879001_130904001D;SPAN=632;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:17:79:34.1:34.1,0,162.8:0:17:-33.91:38.83\n8\t130898322\t477423:2\tG\t[8:130897690[G\t34\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=477423:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=8:130897690(-)-8:130898322(-)__8_130879001_130904001D;SPAN=632;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:17:79:34.1:34.1,0,162.8:0:17:-33.91:38.83\n8\t131152906\t477489:2\tG\tG[4:139733131[\t31\tPASS\tEVDNC=ASSMB;INSERTION=ATCTGCATTTTT;MAPQ=60;MATEID=477489:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_131148501_131173501_29C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:31:31.1:31.1,0,44.3:12:0:-30.9:31.08\n8\t131821933\t476530:2\tG\t]8:128891244]G\t54\tPASS\tEVDNC=ASSMB;INSERTION=TT;MAPQ=60;MATEID=476530:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_128870001_128895001_45C;SPAN=2930689;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:19:29:18.2:54.5,0,18.2:19:0:-55.55:55.55\n8\t131831800\t477799:2\tA\tA]8:126797640]\t79\tPASS\tDISC_MAPQ=52;EVDNC=ASDIS;HOMSEQ=TTTCT;MAPQ=60;MATEID=477799:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_131810001_131835001_1C;SPAN=5034160;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:26:31:1.8:79.2,1.8,0:20:8:-81.69:81.69\n8\t133317217\t478309:1\tT\tT[8:133317524[\t99\tPASS\tEVDNC=ASSMB;HOMSEQ=CATAATAACTATTTTT;MAPQ=60;MATEID=478309:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_133304501_133329501_17C;SPAN=307;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:34:22:9.3:102.3,9.3,0:34:0:-102.3:102.3\n8\t133317524\t478309:2\tC\t]8:133317217]C\t99\tPASS\tEVDNC=ASSMB;HOMSEQ=CATAATAACTATTTTT;MAPQ=60;MATEID=478309:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_133304501_133329501_17C;SPAN=307;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:34:22:9.3:102.3,9.3,0:34:0:-102.3:102.3\n8\t134070686\t478579:1\tT\tT[8:134076773[\t10\tPASS\tEVDNC=ASSMB;HOMSEQ=CATTCTTCAACATTTT;MAPQ=60;MATEID=478579:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_134064001_134089001_56C;SPAN=6087;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:58:10.1:10.1,0,135.5:8:0:-10.1:16.57\n8\t134076773\t478579:2\tC\t]8:134070686]C\t10\tPASS\tEVDNC=ASSMB;HOMSEQ=CATTCTTCAACATTTT;MAPQ=60;MATEID=478579:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_134064001_134089001_56C;SPAN=6087;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:58:10.1:10.1,0,135.5:8:0:-10.1:16.57\n8\t135895484\t479171:1\tA\t]8:135918805]A\t39\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AG;MAPQ=60;MATEID=479171:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_135901501_135926501_131C;SPAN=23321;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:23:16.7:39.8,0,16.7:8:10:-40.18:40.18\n8\t135918805\t479171:2\tG\tG[8:135895484[\t39\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AG;MAPQ=60;MATEID=479171:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_135901501_135926501_131C;SPAN=23321;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:23:16.7:39.8,0,16.7:8:10:-40.18:40.18\n8\t136147954\t479271:1\tC\tC[8:136151656[\t99\tPASS\tEVDNC=ASSMB;HOMSEQ=GC;MAPQ=60;MATEID=479271:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_136146501_136171501_74C;SPAN=3702;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:35:25:9.6:105.6,9.6,0:35:0:-105.6:105.6\n8\t136151656\t479271:2\tG\t]8:136147954]G\t99\tPASS\tEVDNC=ASSMB;HOMSEQ=GC;MAPQ=60;MATEID=479271:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_136146501_136171501_74C;SPAN=3702;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:35:25:9.6:105.6,9.6,0:35:0:-105.6:105.6\n8\t136645913\t479453:2\tA\t[4:142696529[A\t26\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=CT;MAPQ=60;MATEID=479453:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_136636501_136661501_10C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:24:26.3:26.3,0,32.9:10:2:-26.26:26.32\n8\t136646252\t479457:2\tG\t]4:145607890]G\t16\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=479457:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=4:145607890(+)-8:136646252(-)__8_136636501_136661501D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:36:16.4:16.4,0,72.5:0:8:-16.29:18.4\n8\t136646564\t479452:2\tC\tC[4:141260745[\t24\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=GAC;MAPQ=60;MATEID=479452:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_136636501_136661501_40C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:29:24.8:24.8,0,47.9:8:5:-24.86:25.27\n8\t138020879\t886287:1\tG\t]20:55858690]G\t22\tPASS\tDISC_MAPQ=54;EVDNC=ASDIS;HOMSEQ=GC;MAPQ=60;MATEID=886287:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_55835501_55860501_0C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:39:22.1:22.1,0,74.9:6:8:-22.05:23.72\n8\t138632595\t480393:2\tG\t[4:133589596[G\t17\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=C;MAPQ=60;MATEID=480393:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_8_138621001_138646001_7C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:32:17.6:17.6,0,60.5:6:3:-17.41:18.87\n8\t139084311\t671986:1\tA\tA[13:61171765[\t29\tPASS\tEVDNC=ASSMB;INSERTION=G;MAPQ=60;MATEID=671986:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_13_61152001_61177001_19C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:14:5.9:29,0,5.9:10:0:-29.91:29.91\n8\t139960606\t480879:1\tC\tC[8:139962907[\t33\tPASS\tEVDNC=ASSMB;INSERTION=AGT;MAPQ=60;MATEID=480879:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_139944001_139969001_95C;SPAN=2301;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:33:33.8:33.8,0,47:13:0:-33.64:33.8\n8\t139962907\t480879:2\tA\t]8:139960606]A\t33\tPASS\tEVDNC=ASSMB;INSERTION=AGT;MAPQ=60;MATEID=480879:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_139944001_139969001_95C;SPAN=2301;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:33:33.8:33.8,0,47:13:0:-33.64:33.8\n8\t140088893\t480935:2\tT\t]8:129429457]T\t20\tPASS\tEVDNC=ASSMB;HOMSEQ=T;MAPQ=60;MATEID=480935:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_140066501_140091501_37C;SPAN=10659436;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:35:20:20,0,66.2:9:0:-19.87:21.36\n8\t140089087\t480933:2\tA\tA]8:90572079]\t42\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=A;MAPQ=60;MATEID=480933:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_8_140066501_140091501_99C;SPAN=49517008;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:15:24:16.4:42.8,0,16.4:10:5:-43.34:43.34\n8\t141227424\t481280:1\tT\tT[8:141229502[\t14\tPASS\tEVDNC=ASSMB;HOMSEQ=AGCT;MAPQ=60;MATEID=481280:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_141218001_141243001_16C;SPAN=2078;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:7:33:14:14,0,66.8:7:0:-13.83:15.94\n8\t141229502\t481280:2\tA\t]8:141227424]A\t14\tPASS\tEVDNC=ASSMB;HOMSEQ=AGCT;MAPQ=60;MATEID=481280:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_141218001_141243001_16C;SPAN=2078;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:7:33:14:14,0,66.8:7:0:-13.83:15.94\n8\t141347578\t481342:1\tT\t]8:141348077]T\t23\tPASS\tDISC_MAPQ=26;EVDNC=DSCRD;IMPRECISE;MAPQ=26;MATEID=481342:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=8:141347578(-)-8:141348077(+)__8_141340501_141365501D;SPAN=499;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:23:23.3:23.3,0,33.2:0:9:-23.24:23.37\n8\t141348077\t481342:2\tA\tA[8:141347578[\t23\tPASS\tDISC_MAPQ=48;EVDNC=DSCRD;IMPRECISE;MAPQ=48;MATEID=481342:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=8:141347578(-)-8:141348077(+)__8_141340501_141365501D;SPAN=499;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:23:23.3:23.3,0,33.2:0:9:-23.24:23.37\n8\t141644937\t477337:2\tT\t]8:130722580]T\t29\tPASS\tDISC_MAPQ=0;EVDNC=ASDIS;HOMSEQ=TCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTT;MAPQ=37;MATEID=477337:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_8_130707501_130732501_91C;SPAN=10922357;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:37:29.3:29.3,0,62.3:12:5:-29.21:29.92\n8\t142222638\t481809:1\tA\t]8:142223127]A\t13\tPASS\tDISC_MAPQ=39;EVDNC=DSCRD;IMPRECISE;MAPQ=39;MATEID=481809:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=8:142222638(-)-8:142223127(+)__8_142222501_142247501D;SPAN=489;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:48:13.1:13.1,0,105.5:0:8:-12.92:17.28\n8\t142223127\t481809:2\tC\tC[8:142222638[\t13\tPASS\tDISC_MAPQ=48;EVDNC=DSCRD;IMPRECISE;MAPQ=48;MATEID=481809:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=8:142222638(-)-8:142223127(+)__8_142222501_142247501D;SPAN=489;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:48:13.1:13.1,0,105.5:0:8:-12.92:17.28\n8\t142413422\t481912:1\tC\tC[8:142414319[\t99\tPASS\tEVDNC=ASSMB;HOMSEQ=CACAC;MAPQ=60;MATEID=481912:2;MATENM=6;NM=1;NUMPARTS=2;SCTG=c_8_142394001_142419001_27C;SPAN=897;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:35:18:9.6:105.6,9.6,0:35:0:-105.6:105.6\n8\t142414319\t481912:2\tC\t]8:142413422]C\t99\tPASS\tEVDNC=ASSMB;HOMSEQ=CACAC;MAPQ=60;MATEID=481912:1;MATENM=1;NM=6;NUMPARTS=2;SCTG=c_8_142394001_142419001_27C;SPAN=897;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:35:18:9.6:105.6,9.6,0:35:0:-105.6:105.6\n8\t142832825\t482096:1\tC\t[8:142838254[C\t20\tPASS\tDISC_MAPQ=45;EVDNC=DSCRD;IMPRECISE;MAPQ=45;MATEID=482096:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=8:142832825(-)-8:142838254(-)__8_142810501_142835501D;SPAN=5429;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:22:20.3:20.3,0,33.5:0:8:-20.22:20.45\n8\t142838254\t482096:2\tG\t[8:142832825[G\t20\tPASS\tDISC_MAPQ=57;EVDNC=DSCRD;IMPRECISE;MAPQ=57;MATEID=482096:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=8:142832825(-)-8:142838254(-)__8_142810501_142835501D;SPAN=5429;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:22:20.3:20.3,0,33.5:0:8:-20.22:20.45\n8\t142877785\t482139:1\tG\tG[8:142915758[\t42\tPASS\tDISC_MAPQ=56;EVDNC=DSCRD;IMPRECISE;MAPQ=56;MATEID=482139:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=8:142877785(+)-8:142915758(-)__8_142908501_142933501D;SPAN=37973;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:14:6:3.9:42.9,3.9,0:0:14:-42.91:42.91\n8\t142915758\t482139:2\tG\t]8:142877785]G\t42\tPASS\tDISC_MAPQ=59;EVDNC=DSCRD;IMPRECISE;MAPQ=59;MATEID=482139:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=8:142877785(+)-8:142915758(-)__8_142908501_142933501D;SPAN=37973;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:14:6:3.9:42.9,3.9,0:0:14:-42.91:42.91\n8\t143093112\t482353:1\tC\t]8:143204625]C\t60\tPASS\tEVDNC=ASSMB;INSERTION=AC;MAPQ=60;MATEID=482353:2;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_8_143202501_143227501_66C;SPAN=111513;SUBN=1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:21:30:14.6:60.8,0,14.6:21:0:-62.47:62.47\n8\t143204625\t482353:2\tT\tT[8:143093112[\t60\tPASS\tEVDNC=ASSMB;INSERTION=AC;MAPQ=60;MATEID=482353:1;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_8_143202501_143227501_66C;SPAN=111513;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:21:30:14.6:60.8,0,14.6:21:0:-62.47:62.47\n8\t143551897\t482512:1\tT\tT[8:143554070[\t82\tPASS\tEVDNC=ASSMB;HOMSEQ=TGT;MAPQ=60;MATEID=482512:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_8_143545501_143570501_56C;SPAN=2173;SUBN=2;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:27:19:7.5:82.5,7.5,0:27:0:-82.52:82.52\n8\t143554070\t482512:2\tT\t]8:143551897]T\t82\tPASS\tEVDNC=ASSMB;HOMSEQ=TGT;MAPQ=60;MATEID=482512:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_8_143545501_143570501_56C;SPAN=2173;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:27:19:7.5:82.5,7.5,0:27:0:-82.52:82.52\n8\t143618862\t482537:2\tT\t[3:186858374[T\t52\tPASS\tDISC_MAPQ=37;EVDNC=ASDIS;HOMSEQ=TA;MAPQ=6;MATEID=482537:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_143619001_143644001_92C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:18:1:4.8:52.8,4.8,0:13:9:-52.81:52.81\n8\t143746946\t482663:1\tC\t]8:143895039]C\t25\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=482663:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_143888501_143913501_10C;SPAN=148093;SUBN=2;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:15:12.2:25.4,0,12.2:9:0:-25.74:25.74\n8\t143895039\t482663:2\tC\tC[8:143746946[\t25\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=482663:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_143888501_143913501_10C;SPAN=148093;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:15:12.2:25.4,0,12.2:9:0:-25.74:25.74\n8\t144020506\t482722:1\tT\t]8:144021175]T\t32\tPASS\tDISC_MAPQ=45;EVDNC=DSCRD;IMPRECISE;MAPQ=45;MATEID=482722:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=8:144020506(-)-8:144021175(+)__8_144011001_144036001D;SPAN=669;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:36:32.9:32.9,0,56:0:13:-32.79:33.17\n8\t144021175\t482722:2\tT\tT[8:144020506[\t32\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=482722:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=8:144020506(-)-8:144021175(+)__8_144011001_144036001D;SPAN=669;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:36:32.9:32.9,0,56:0:13:-32.79:33.17\n8\t144619941\t482943:1\tT\t]8:144620589]T\t68\tPASS\tEVDNC=ASSMB;HOMSEQ=TGAGAGCATGTGTGCC;MAPQ=60;MATEID=482943:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_144599001_144624001_44C;SPAN=648;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:26:63:68.3:68.3,0,88.1:26:0:-68.12:68.29\n8\t144620589\t482943:2\tC\tC[8:144619941[\t68\tPASS\tEVDNC=ASSMB;HOMSEQ=TGAGAGCATGTGTGCC;MAPQ=60;MATEID=482943:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_8_144599001_144624001_44C;SPAN=648;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:26:63:68.3:68.3,0,88.1:26:0:-68.12:68.29\n8\t145021387\t483041:1\tT\t]8:145028047]T\t99\tPASS\tDISC_MAPQ=49;EVDNC=DSCRD;IMPRECISE;MAPQ=49;MATEID=483041:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=8:145021387(-)-8:145028047(+)__8_145015501_145040501D;SPAN=6660;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:43:63:32:124.4,0,32:0:43:-127.1:127.1\n8\t145028047\t483041:2\tG\tG[8:145021387[\t99\tPASS\tDISC_MAPQ=58;EVDNC=DSCRD;IMPRECISE;MAPQ=58;MATEID=483041:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=8:145021387(-)-8:145028047(+)__8_145015501_145040501D;SPAN=6660;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:43:63:32:124.4,0,32:0:43:-127.1:127.1\n9\t320206\t483191:1\tA\tA[9:322353[\t92\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AACACTCACGGAAAAAGCCCAGGTTCTGTGATCAGAGATGGCTGGGCTCAAAACCTGACCGAACACTCACGGAAAAAGCCCAGGTTCTGTGATCAGAGATGGCTGGGCTCA;MAPQ=60;MATEID=483191:2;MATENM=2;NM=1;NUMPARTS=2;SCTG=c_9_318501_343501_0C;SPAN=2147;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:31:4:8.4:92.4,8.4,0:9:22:-92.42:92.42\n9\t322353\t483191:2\tA\t]9:320206]A\t92\tPASS\tDISC_MAPQ=51;EVDNC=ASDIS;HOMSEQ=AACACTCACGGAAAAAGCCCAGGTTCTGTGATCAGAGATGGCTGGGCTCAAAACCTGACCGAACACTCACGGAAAAAGCCCAGGTTCTGTGATCAGAGATGGCTGGGCTCA;MAPQ=60;MATEID=483191:1;MATENM=1;NM=2;NUMPARTS=2;SCTG=c_9_318501_343501_0C;SPAN=2147;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:31:4:8.4:92.4,8.4,0:9:22:-92.42:92.42\n9\t584229\t483259:2\tA\t]4:97127269]A\t30\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=A;MAPQ=60;MATEID=483259:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_563501_588501_1C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:22:23.6:30.2,0,23.6:6:5:-30.15:30.15\n9\t584347\t483264:1\tG\tG[9:1096692[\t24\tPASS\tEVDNC=ASSMB;HOMSEQ=AGG;MAPQ=60;MATEID=483264:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_563501_588501_8C;SPAN=512345;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:20:24.2:24.2,0,24.2:9:0:-24.09:24.09\n9\t793721\t483347:1\tG\tG[9:794383[\t39\tPASS\tDISC_MAPQ=56;EVDNC=ASDIS;HOMSEQ=CCCTTTCTGCTTAAACTGGCTTGAGTGAATTCTGTTGTCTGCAACTAAAAACACTAATCCACATAAGATCCTTGGTTTTATTTACTGATGCTCTAGTCACTTGCCATTTTCTACTGAATTCTCCTTTTCTCCTCATTAGGATCCCTATGTCAATGCTCTGTCCCTGCCTCTAG;MAPQ=60;MATEID=483347:2;MATENM=4;NM=6;NUMPARTS=2;SCTG=c_9_784001_809001_19C;SPAN=662;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:13:0:3.6:39.6,3.6,0:0:13:-39.61:39.61\n9\t794383\t483347:2\tC\t]9:793721]C\t39\tPASS\tDISC_MAPQ=56;EVDNC=ASDIS;HOMSEQ=CCCTTTCTGCTTAAACTGGCTTGAGTGAATTCTGTTGTCTGCAACTAAAAACACTAATCCACATAAGATCCTTGGTTTTATTTACTGATGCTCTAGTCACTTGCCATTTTCTACTGAATTCTCCTTTTCTCCTCATTAGGATCCCTATGTCAATGCTCTGTCCCTGCCTCTAG;MAPQ=60;MATEID=483347:1;MATENM=6;NM=4;NUMPARTS=2;SCTG=c_9_784001_809001_19C;SPAN=662;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:13:0:3.6:39.6,3.6,0:0:13:-39.61:39.61\n9\t1096692\t483264:2\tA\t]9:584347]A\t24\tPASS\tEVDNC=ASSMB;HOMSEQ=AGG;MAPQ=60;MATEID=483264:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_563501_588501_8C;SPAN=512345;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:20:24.2:24.2,0,24.2:9:0:-24.09:24.09\n9\t2279343\t483943:1\tT\tT]9:3813164]\t23\tPASS\tDISC_MAPQ=35;EVDNC=DSCRD;IMPRECISE;MAPQ=35;MATEID=483943:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=9:2279343(+)-9:3813164(+)__9_3797501_3822501D;SPAN=1533821;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:8:8:2.1:23.1,2.1,0:0:8:-23.11:23.11\n9\t3813164\t483943:2\tT\tT]9:2279343]\t23\tPASS\tDISC_MAPQ=25;EVDNC=DSCRD;IMPRECISE;MAPQ=25;MATEID=483943:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=9:2279343(+)-9:3813164(+)__9_3797501_3822501D;SPAN=1533821;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:8:8:2.1:23.1,2.1,0:0:8:-23.11:23.11\n9\t6888787\t484745:1\tT\tT[9:6889088[\t46\tPASS\tEVDNC=ASSMB;HOMSEQ=CTTCTGTGTTTTTT;MAPQ=60;MATEID=484745:2;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_9_6884501_6909501_8C;SPAN=301;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:15:18:1.5:46.2,1.5,0:15:0:-47.02:47.02\n9\t6889088\t484745:2\tC\t]9:6888787]C\t46\tPASS\tEVDNC=ASSMB;HOMSEQ=CTTCTGTGTTTTTT;MAPQ=60;MATEID=484745:1;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_9_6884501_6909501_8C;SPAN=301;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:15:18:1.5:46.2,1.5,0:15:0:-47.02:47.02\n9\t7367657\t484878:1\tC\t]9:7439854]C\t62\tPASS\tEVDNC=ASSMB;INSERTION=TAT;MAPQ=60;MATEID=484878:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_7423501_7448501_17C;SPAN=72197;SUBN=2;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:19:21:5.7:62.7,5.7,0:19:0:-61.54:61.54\n9\t7439854\t484878:2\tG\tG[9:7367657[\t62\tPASS\tEVDNC=ASSMB;INSERTION=TAT;MAPQ=60;MATEID=484878:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_7423501_7448501_17C;SPAN=72197;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:19:21:5.7:62.7,5.7,0:19:0:-61.54:61.54\n9\t7741406\t288543:2\tC\tC[5:39787650[\t64\tPASS\tDISC_MAPQ=55;EVDNC=ASDIS;INSERTION=GAGTT;MAPQ=60;MATEID=288543:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_5_39763501_39788501_1C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:22:28:5.3:64.7,0,5.3:20:12:-67.65:67.65\n9\t8826067\t485180:1\tA\t]9:8868077]A\t79\tPASS\tEVDNC=ASSMB;INSERTION=TT;MAPQ=60;MATEID=485180:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_9_8844501_8869501_18C;SPAN=42010;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:26:21:7.2:79.2,7.2,0:26:0:-79.22:79.22\n9\t8868077\t485180:2\tG\tG[9:8826067[\t79\tPASS\tEVDNC=ASSMB;INSERTION=TT;MAPQ=60;MATEID=485180:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_9_8844501_8869501_18C;SPAN=42010;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:26:21:7.2:79.2,7.2,0:26:0:-79.22:79.22\n9\t9054481\t485408:1\tT\tT[9:9712574[\t92\tPASS\tEVDNC=ASSMB;INSERTION=GGCAGTTGAAATAGTAGATATAAAATTATCATGACGTTTACCAGTAATATTTATGAT;MAPQ=60;MATEID=485408:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_9702001_9727001_28C;SPAN=658093;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:30:14:8.4:92.4,8.4,0:30:0:-92.42:92.42\n9\t9712574\t485408:2\tA\t]9:9054481]A\t92\tPASS\tEVDNC=ASSMB;INSERTION=GGCAGTTGAAATAGTAGATATAAAATTATCATGACGTTTACCAGTAATATTTATGAT;MAPQ=60;MATEID=485408:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_9702001_9727001_28C;SPAN=658093;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:30:14:8.4:92.4,8.4,0:30:0:-92.42:92.42\n9\t10098711\t485469:2\tA\tA[4:117217096[\t23\tPASS\tDISC_MAPQ=59;EVDNC=DSCRD;IMPRECISE;MAPQ=59;MATEID=485469:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=4:117217096(-)-9:10098711(+)__9_10094001_10119001D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:8:7:2.1:23.1,2.1,0:0:8:-23.11:23.11\n9\t10841158\t485690:2\tT\t]4:155419067]T\t20\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=485690:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_10829001_10854001_13C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:23:20:20,0,36.5:8:0:-19.94:20.25\n9\t10945775\t489659:1\tA\tA[9:30287949[\t36\tPASS\tEVDNC=ASSMB;HOMSEQ=AAGA;MAPQ=60;MATEID=489659:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_30282001_30307001_17C;SPAN=19342174;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:12:10:3.3:36.3,3.3,0:12:0:-36.31:36.31\n9\t11384325\t485861:2\tG\tG[8:245406[\t25\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=GTG;MAPQ=60;MATEID=485861:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_11368001_11393001_5C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:17:15.2:25.1,0,15.2:4:6:-24.99:24.99\n9\t15815423\t486901:1\tT\tT[9:15821942[\t72\tPASS\tDISC_MAPQ=59;EVDNC=DSCRD;IMPRECISE;MAPQ=59;MATEID=486901:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=9:15815423(+)-9:15821942(-)__9_15802501_15827501D;SPAN=6519;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:24:4:6.6:72.6,6.6,0:0:24:-72.62:72.62\n9\t15821942\t486901:2\tG\t]9:15815423]G\t72\tPASS\tDISC_MAPQ=46;EVDNC=DSCRD;IMPRECISE;MAPQ=46;MATEID=486901:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=9:15815423(+)-9:15821942(-)__9_15802501_15827501D;SPAN=6519;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:24:4:6.6:72.6,6.6,0:0:24:-72.62:72.62\n9\t21837129\t488016:1\tT\tT[9:22081242[\t29\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=488016:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=9:21837129(+)-9:22081242(-)__9_22074501_22099501D;SPAN=244113;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:10:6:2.7:29.7,2.7,0:0:10:-29.71:29.71\n9\t21841795\t327574:2\tA\tA[6:13128174[\t49\tPASS\tDISC_MAPQ=0;EVDNC=TSI_L;HOMSEQ=ATCACATCACAGGACTCTTTGCAGACATCCCCCAGCATCAGCTCAGACAGAGCCTGTTGCCCTGCTGAGTGGCTAGACCCAGAAGAGCAATAACAGTCACTGCAGTCCAGGTCTCAAGAAGCCCCATCCCTAGGGGAAGGGGGAGAGCACAACATCAAGGGGTCACCCCTTGGGACAAGAAAATCTGAACAGCAGCCCTTGAGTTTCAAACTTCTC;INSERTION=ACTTCTC;MAPQ=33;MATEID=327574:1;MATENM=0;NM=8;NUMPARTS=4;REPSEQ=CTCT;SCTG=c_6_13107501_13132501_88C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:17:16:4.5:49.5,4.5,0:13:6:-49.51:49.51\n9\t22081242\t488016:2\tC\t]9:21837129]C\t29\tPASS\tDISC_MAPQ=59;EVDNC=DSCRD;IMPRECISE;MAPQ=59;MATEID=488016:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=9:21837129(+)-9:22081242(-)__9_22074501_22099501D;SPAN=244113;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:10:6:2.7:29.7,2.7,0:0:10:-29.71:29.71\n9\t22496528\t488102:1\tT\tT[9:22504346[\t49\tPASS\tEVDNC=ASSMB;INSERTION=T;MAPQ=60;MATEID=488102:2;MATENM=8;NM=2;NUMPARTS=2;SCTG=c_9_22491001_22516001_0C;SPAN=7818;SUBN=1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:17:10:4.5:49.5,4.5,0:17:0:-49.51:49.51\n9\t22504346\t488102:2\tC\t]9:22496528]C\t49\tPASS\tEVDNC=ASSMB;INSERTION=T;MAPQ=60;MATEID=488102:1;MATENM=2;NM=8;NUMPARTS=2;SCTG=c_9_22491001_22516001_0C;SPAN=7818;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:17:10:4.5:49.5,4.5,0:17:0:-49.51:49.51\n9\t23362803\t488288:1\tA\tA[9:23377688[\t42\tPASS\tEVDNC=ASSMB;INSERTION=GA;MAPQ=60;MATEID=488288:2;MATENM=4;NM=1;NUMPARTS=2;SCTG=c_9_23373001_23398001_1C;SPAN=14885;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:14:3:3.9:42.9,3.9,0:14:0:-42.91:42.91\n9\t23377688\t488288:2\tT\t]9:23362803]T\t42\tPASS\tEVDNC=ASSMB;INSERTION=GA;MAPQ=60;MATEID=488288:1;MATENM=1;NM=4;NUMPARTS=2;SCTG=c_9_23373001_23398001_1C;SPAN=14885;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:14:3:3.9:42.9,3.9,0:14:0:-42.91:42.91\n9\t24546560\t123497:2\tG\tG]2:162753054]\t17\tPASS\tDISC_MAPQ=55;EVDNC=DSCRD;IMPRECISE;MAPQ=55;MATEID=123497:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=2:162753054(+)-9:24546560(+)__2_162729001_162754001D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:34:17:17,0,66.5:0:8:-16.85:18.63\n9\t24908456\t488516:1\tG\t]9:24908668]G\t24\tPASS\tEVDNC=ASSMB;HOMSEQ=GA;MAPQ=60;MATEID=488516:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_24892001_24917001_15C;SPAN=212;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:31:24.5:24.5,0,50.9:10:0:-24.3:24.91\n9\t24908668\t488516:2\tA\tA[9:24908456[\t24\tPASS\tEVDNC=ASSMB;HOMSEQ=GA;MAPQ=60;MATEID=488516:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_24892001_24917001_15C;SPAN=212;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:31:24.5:24.5,0,50.9:10:0:-24.3:24.91\n9\t24980783\t488542:1\tG\tG]Un_KN707681v1_decoy:4379]\t36\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=488542:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_9_24965501_24990501_4C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:12:10:3.3:36.3,3.3,0:12:0:-36.31:36.31\n9\t25849461\t12984:2\tT\t]1:53953226]T\t22\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;MAPQ=60;MATEID=12984:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_53949001_53974001_66C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:39:22.1:22.1,0,74.9:6:6:-22.05:23.72\n9\t26921863\t488914:1\tT\tT[9:27029400[\t46\tPASS\tEVDNC=ASSMB;HOMSEQ=AT;MAPQ=60;MATEID=488914:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_27023501_27048501_9C;SPAN=107537;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:15:10:4.2:46.2,4.2,0:15:0:-46.21:46.21\n9\t27029400\t488914:2\tA\t]9:26921863]A\t46\tPASS\tEVDNC=ASSMB;HOMSEQ=AT;MAPQ=60;MATEID=488914:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_27023501_27048501_9C;SPAN=107537;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:15:10:4.2:46.2,4.2,0:15:0:-46.21:46.21\n9\t28733895\t489296:1\tA\t]9:28736771]A\t24\tPASS\tEVDNC=ASSMB;HOMSEQ=AC;MAPQ=60;MATEID=489296:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_9_28714001_28739001_0C;SPAN=2876;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:19:21.2:24.5,0,21.2:9:0:-24.37:24.37\n9\t28736771\t489296:2\tC\tC[9:28733895[\t24\tPASS\tEVDNC=ASSMB;HOMSEQ=AC;MAPQ=60;MATEID=489296:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_9_28714001_28739001_0C;SPAN=2876;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:19:21.2:24.5,0,21.2:9:0:-24.37:24.37\n9\t29653849\t13059:2\tA\tA[1:53954656[\t7\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=13059:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_53949001_53974001_206C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:90:7.7:7.7,0,218.9:10:0:-7.712:19.71\n9\t29661186\t489518:1\tA\tA[9:29664028[\t25\tPASS\tEVDNC=ASSMB;HOMSEQ=TA;MAPQ=60;MATEID=489518:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_29645001_29670001_21C;SPAN=2842;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:16:12.2:25.4,0,12.2:9:0:-25.35:25.35\n9\t29664028\t489518:2\tT\t]9:29661186]T\t25\tPASS\tEVDNC=ASSMB;HOMSEQ=TA;MAPQ=60;MATEID=489518:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_29645001_29670001_21C;SPAN=2842;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:16:12.2:25.4,0,12.2:9:0:-25.35:25.35\n9\t30287949\t489659:2\tA\t]9:10945775]A\t36\tPASS\tEVDNC=ASSMB;HOMSEQ=AAGA;MAPQ=60;MATEID=489659:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_30282001_30307001_17C;SPAN=19342174;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:12:10:3.3:36.3,3.3,0:12:0:-36.31:36.31\n9\t30288138\t489652:2\tG\t]4:145607589]G\t40\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=489652:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_30282001_30307001_41C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:22:13.7:40.1,0,13.7:14:0:-40.63:40.63\n9\t30288184\t702277:1\tT\tT[14:64280428[\t33\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=702277:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_64263501_64288501_38C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:22:20.3:33.5,0,20.3:12:0:-33.55:33.55\n9\t30288228\t489646:2\tG\t[4:124756824[G\t34\tPASS\tDISC_MAPQ=60;EVDNC=TSI_L;HOMSEQ=AGGA;INSERTION=AAC;MAPQ=60;MATEID=489646:1;MATENM=0;NM=0;NUMPARTS=3;REPSEQ=CAACAA;SCTG=c_9_30282001_30307001_59C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:16:25:11.3:34.7,0,11.3:16:2:-35.31:35.31\n9\t30288439\t489643:2\tT\tT]4:105671811]\t56\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=ATGT;MAPQ=60;MATEID=489643:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_30282001_30307001_56C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:19:10:5.1:56.1,5.1,0:14:5:-56.11:56.11\n9\t30690082\t945666:1\tT\tT]X:136874391]\t32\tPASS\tDISC_MAPQ=15;EVDNC=DSCRD;IMPRECISE;MAPQ=15;MATEID=945666:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=9:30690082(+)-23:136874391(+)__23_136857001_136882001D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:16:5.6:32,0,5.6:0:11:-32.57:32.57\n9\t33423378\t490422:1\tT\tT[9:33424657[\t23\tPASS\tEVDNC=ASSMB;HOMSEQ=AAGAATCTAGTTTTT;MAPQ=60;MATEID=490422:2;MATENM=1;NM=2;NUMPARTS=2;SCTG=c_9_33418001_33443001_20C;SPAN=1279;SUBN=6;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:7:8:2.1:23.1,2.1,0:7:0:-22.34:22.34\n9\t33424657\t490422:2\tA\t]9:33423378]A\t23\tPASS\tEVDNC=ASSMB;HOMSEQ=AAGAATCTAGTTTTT;MAPQ=60;MATEID=490422:1;MATENM=2;NM=1;NUMPARTS=2;SCTG=c_9_33418001_33443001_20C;SPAN=1279;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:7:8:2.1:23.1,2.1,0:7:0:-22.34:22.34\n9\t34681484\t490777:1\tT\t]9:34681981]T\t72\tPASS\tEVDNC=ASSMB;HOMSEQ=TG;MAPQ=60;MATEID=490777:2;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_9_34667501_34692501_8C;SPAN=497;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:24:28:1.2:72.6,1.2,0:24:0:-76:76\n9\t34681981\t490777:2\tG\tG[9:34681484[\t72\tPASS\tEVDNC=ASSMB;HOMSEQ=TG;MAPQ=60;MATEID=490777:1;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_9_34667501_34692501_8C;SPAN=497;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:24:28:1.2:72.6,1.2,0:24:0:-76:76\n9\t36362899\t491079:1\tT\tT[9:36364083[\t75\tPASS\tDISC_MAPQ=50;EVDNC=ASDIS;HOMSEQ=GCCTCCCAAAGTGCT;MAPQ=60;MATEID=491079:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_9_36358001_36383001_4C;SPAN=1184;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:25:8:6.9:75.9,6.9,0:17:15:-75.92:75.92\n9\t36364083\t491079:2\tG\t]9:36362899]G\t75\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=GCCTCCCAAAGTGCT;MAPQ=60;MATEID=491079:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_9_36358001_36383001_4C;SPAN=1184;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:25:8:6.9:75.9,6.9,0:17:15:-75.92:75.92\n9\t36423668\t491100:1\tG\t]13:73390558]G\t56\tPASS\tDISC_MAPQ=4;EVDNC=ASDIS;HOMSEQ=G;MAPQ=22;MATEID=491100:2;MATENM=1;NM=2;NUMPARTS=2;SCTG=c_9_36407001_36432001_29C;SPAN=-1;SUBN=1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:19:7:5.1:56.1,5.1,0:14:6:-56.11:56.11\n9\t37090389\t491310:1\tA\t]9:37377642]A\t29\tPASS\tDISC_MAPQ=59;EVDNC=DSCRD;IMPRECISE;MAPQ=59;MATEID=491310:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=9:37090389(-)-9:37377642(+)__9_37362501_37387501D;SPAN=287253;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:10:8:2.7:29.7,2.7,0:0:10:-29.71:29.71\n9\t37377642\t491310:2\tG\tG[9:37090389[\t29\tPASS\tDISC_MAPQ=58;EVDNC=DSCRD;IMPRECISE;MAPQ=58;MATEID=491310:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=9:37090389(-)-9:37377642(+)__9_37362501_37387501D;SPAN=287253;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:10:8:2.7:29.7,2.7,0:0:10:-29.71:29.71\n9\t40899697\t492400:1\tA\tA[9:40902847[\t36\tPASS\tDISC_MAPQ=34;EVDNC=DSCRD;IMPRECISE;MAPQ=34;MATEID=492400:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=9:40899697(+)-9:40902847(-)__9_40890501_40915501D;SPAN=3150;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:22:17:36.8,0,17:0:13:-37.05:37.05\n9\t40902847\t492400:2\tT\t]9:40899697]T\t36\tPASS\tDISC_MAPQ=41;EVDNC=DSCRD;IMPRECISE;MAPQ=41;MATEID=492400:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=9:40899697(+)-9:40902847(-)__9_40890501_40915501D;SPAN=3150;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:22:17:36.8,0,17:0:13:-37.05:37.05\n9\t40923207\t492711:1\tC\tC[9:40924335[\t25\tPASS\tEVDNC=ASSMB;HOMSEQ=GGATTCCAGAACACTCCTGC;MAPQ=60;MATEID=492711:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_40915001_40940001_43C;SPAN=1128;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:74:25.4:25.4,0,160.7:14:0:-25.41:31.1\n9\t40924335\t492711:2\tG\t]9:40923207]G\t25\tPASS\tEVDNC=ASSMB;HOMSEQ=GGATTCCAGAACACTCCTGC;MAPQ=60;MATEID=492711:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_40915001_40940001_43C;SPAN=1128;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:74:25.4:25.4,0,160.7:14:0:-25.41:31.1\n9\t40929455\t492742:1\tA\tA]9:63918421]\t28\tPASS\tDISC_MAPQ=54;EVDNC=DSCRD;IMPRECISE;MAPQ=54;MATEID=492742:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=9:40929455(+)-9:63918421(+)__9_40915001_40940001D;SPAN=22988966;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:29:28.1:28.1,0,44.6:0:11:-28.16:28.37\n9\t41047840\t232702:2\tT\tT[4:61939924[\t26\tPASS\tDISC_MAPQ=20;EVDNC=ASDIS;HOMSEQ=TTT;MAPQ=44;MATEID=232702:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_61936001_61961001_17C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:9:8:2.4:26.4,2.4,0:8:5:-26.41:26.41\n9\t41237750\t495356:1\tG\tG[9:62802569[\t33\tPASS\tDISC_MAPQ=52;EVDNC=DSCRD;IMPRECISE;MAPQ=52;MATEID=495356:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=9:41237750(+)-9:62802569(-)__9_62793501_62818501D;SPAN=21564819;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:15:57:33.5:33.5,0,109.4:0:15:-33.49:35.77\n9\t42258584\t493761:1\tG\tG[9:42259464[\t47\tPASS\tDISC_MAPQ=25;EVDNC=DSCRD;IMPRECISE;MAPQ=25;MATEID=493761:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=9:42258584(+)-9:42259464(-)__9_42238001_42263001D;SPAN=880;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:17:29:24.8:47.9,0,24.8:0:17:-48.35:48.35\n9\t42259464\t493761:2\tA\t]9:42258584]A\t47\tPASS\tDISC_MAPQ=19;EVDNC=DSCRD;IMPRECISE;MAPQ=19;MATEID=493761:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=9:42258584(+)-9:42259464(-)__9_42238001_42263001D;SPAN=880;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:17:29:24.8:47.9,0,24.8:0:17:-48.35:48.35\n9\t42387022\t493824:1\tT\tT[9:42387326[\t43\tPASS\tEVDNC=ASSMB;HOMSEQ=AATTTGTGT;MAPQ=60;MATEID=493824:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_9_42385001_42410001_40C;SPAN=304;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:16:34:40.1:43.4,0,40.1:16:0:-43.26:43.26\n9\t42387326\t493824:2\tA\t]9:42387022]A\t43\tPASS\tEVDNC=ASSMB;HOMSEQ=AATTTGTGT;MAPQ=60;MATEID=493824:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_9_42385001_42410001_40C;SPAN=304;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:16:34:40.1:43.4,0,40.1:16:0:-43.26:43.26\n9\t43197994\t494276:1\tT\t]9:43199957]T\t99\tPASS\tDISC_MAPQ=43;EVDNC=DSCRD;IMPRECISE;MAPQ=43;MATEID=494276:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=9:43197994(-)-9:43199957(+)__9_43193501_43218501D;SPAN=1963;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:50:47:13.8:151.8,13.8,0:0:50:-151.8:151.8\n9\t43199957\t494276:2\tT\tT[9:43197994[\t99\tPASS\tDISC_MAPQ=40;EVDNC=DSCRD;IMPRECISE;MAPQ=40;MATEID=494276:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=9:43197994(-)-9:43199957(+)__9_43193501_43218501D;SPAN=1963;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:50:47:13.8:151.8,13.8,0:0:50:-151.8:151.8\n9\t45021766\t494722:1\tC\t]9:45152397]C\t42\tPASS\tDISC_MAPQ=25;EVDNC=DSCRD;IMPRECISE;MAPQ=25;MATEID=494722:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=9:45021766(-)-9:45152397(+)__9_45129001_45154001D;SPAN=130631;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:14:6:3.9:42.9,3.9,0:0:14:-42.91:42.91\n9\t45152397\t494722:2\tT\tT[9:45021766[\t42\tPASS\tDISC_MAPQ=32;EVDNC=DSCRD;IMPRECISE;MAPQ=32;MATEID=494722:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=9:45021766(-)-9:45152397(+)__9_45129001_45154001D;SPAN=130631;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:14:6:3.9:42.9,3.9,0:0:14:-42.91:42.91\n9\t61735346\t873198:1\tA\tA[20:29636132[\t36\tPASS\tDISC_MAPQ=45;EVDNC=DSCRD;IMPRECISE;MAPQ=45;MATEID=873198:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=9:61735346(+)-20:29636132(-)__20_29620501_29645501D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:23:20:36.5,0,20:0:13:-36.66:36.66\n9\t62802569\t495356:2\tG\t]9:41237750]G\t33\tPASS\tDISC_MAPQ=24;EVDNC=DSCRD;IMPRECISE;MAPQ=24;MATEID=495356:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=9:41237750(+)-9:62802569(-)__9_62793501_62818501D;SPAN=21564819;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:15:57:33.5:33.5,0,109.4:0:15:-33.49:35.77\n9\t63843968\t870923:1\tC\tC]20:29090598]\t39\tPASS\tDISC_MAPQ=19;EVDNC=DSCRD;IMPRECISE;MAPQ=19;MATEID=870923:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=9:63843968(+)-20:29090598(+)__20_29081501_29106501D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:19:83:39.5:39.5,0,168.2:0:19:-39.39:43.98\n9\t63918421\t492742:2\tG\tG]9:40929455]\t28\tPASS\tDISC_MAPQ=48;EVDNC=DSCRD;IMPRECISE;MAPQ=48;MATEID=492742:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=9:40929455(+)-9:63918421(+)__9_40915001_40940001D;SPAN=22988966;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:29:28.1:28.1,0,44.6:0:11:-28.16:28.37\n9\t65079191\t822950:1\tT\tT[18:15598663[\t23\tPASS\tDISC_MAPQ=54;EVDNC=DSCRD;IMPRECISE;MAPQ=54;MATEID=822950:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=9:65079191(+)-18:15598663(-)__18_15582001_15607001D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:12:6.5:23,0,6.5:0:8:-23.49:23.49\n9\t65437620\t496905:2\tT\t[4:3594169[T\t23\tPASS\tDISC_MAPQ=26;EVDNC=DSCRD;IMPRECISE;MAPQ=26;MATEID=496905:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=4:3594169(-)-9:65437620(-)__9_65415001_65440001D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:8:7:2.1:23.1,2.1,0:0:8:-23.11:23.11\n9\t69123206\t497862:1\tC\tC[9:69128439[\t59\tPASS\tEVDNC=ASSMB;HOMSEQ=AC;MAPQ=60;MATEID=497862:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_69114501_69139501_19C;SPAN=5233;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:20:9:5.4:59.4,5.4,0:20:0:-59.41:59.41\n9\t69128439\t497862:2\tA\t]9:69123206]A\t59\tPASS\tEVDNC=ASSMB;HOMSEQ=AC;MAPQ=60;MATEID=497862:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_69114501_69139501_19C;SPAN=5233;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:20:9:5.4:59.4,5.4,0:20:0:-59.41:59.41\n9\t69278069\t404355:2\tT\t]7:72499762]T\t13\tPASS\tDISC_MAPQ=17;EVDNC=DSCRD;IMPRECISE;MAPQ=17;MATEID=404355:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:72499762(+)-9:69278069(-)__7_72495501_72520501D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:46:13.7:13.7,0,99.5:0:8:-13.48:17.45\n9\t69280450\t497903:1\tT\tT[9:69281647[\t39\tPASS\tDISC_MAPQ=50;EVDNC=DSCRD;IMPRECISE;MAPQ=50;MATEID=497903:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=9:69280450(+)-9:69281647(-)__9_69261501_69286501D;SPAN=1197;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:12:13:3.6:39.6,3.6,0:0:12:-39.28:39.28\n9\t69281647\t497903:2\tT\t]9:69280450]T\t39\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=497903:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=9:69280450(+)-9:69281647(-)__9_69261501_69286501D;SPAN=1197;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:12:13:3.6:39.6,3.6,0:0:12:-39.28:39.28\n9\t74283223\t499130:1\tA\t[9:74283474[A\t75\tPASS\tDISC_MAPQ=255;EVDNC=TSI_L;INSERTION=ACCTTCAAAGGCTGCAATTGGCCAGTTTGCTGAAGCAGCATTGCTGATTAGTTGATTAAATTAATAAAATGGGGCTTTTGCTACCACTGCATTATCAAAGTGTTACCCAACGATAAGTCCTTGAAAATATGTAAAATAAGTTAAAAGAGAGAAGAAACTGAGAAAGCCATTCATGACCACTGACAGAATTATGTCTCCATGGTGGGCTGGCAGGGCAGAGCAGTGGCCCTCTGCTGTGATCCCCTTCAAAGAACCCCCTGAGCCACCCAAAGAAAGCTGATGTGTCCACGGTTCTGTTCTTTTCAGGGGTAGATGTAGGTGGG;MAPQ=60;MATEID=499130:2;MATENM=9;NM=1;NUMPARTS=3;REPSEQ=GGG;SCTG=c_9_74284001_74309001_0C;SPAN=251;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:25:0:6.9:75.9,6.9,0:25:0:-75.92:75.92\n9\t74283474\t499130:2\tG\t[9:74283223[G\t75\tPASS\tDISC_MAPQ=255;EVDNC=TSI_L;INSERTION=ACCTTCAAAGGCTGCAATTGGCCAGTTTGCTGAAGCAGCATTGCTGATTAGTTGATTAAATTAATAAAATGGGGCTTTTGCTACCACTGCATTATCAAAGTGTTACCCAACGATAAGTCCTTGAAAATATGTAAAATAAGTTAAAAGAGAGAAGAAACTGAGAAAGCCATTCATGACCACTGACAGAATTATGTCTCCATGGTGGGCTGGCAGGGCAGAGCAGTGGCCCTCTGCTGTGATCCCCTTCAAAGAACCCCCTGAGCCACCCAAAGAAAGCTGATGTGTCCACGGTTCTGTTCTTTTCAGGGGTAGATGTAGGTGGG;MAPQ=60;MATEID=499130:1;MATENM=1;NM=9;NUMPARTS=3;REPSEQ=GGG;SCTG=c_9_74284001_74309001_0C;SPAN=251;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:25:0:6.9:75.9,6.9,0:25:0:-75.92:75.92\n9\t75533771\t885083:1\tT\t[20:52043400[T\t52\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;MAPQ=60;MATEID=885083:2;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_20_52038001_52063001_156C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:19:36:36.2:52.7,0,36.2:14:14:-52.72:52.72\n9\t76304638\t499637:1\tT\tT[9:76307080[\t19\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=499637:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=9:76304638(+)-9:76307080(-)__9_76293001_76318001D;SPAN=2442;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:26:19.1:19.1,0,45.5:0:8:-19.1:19.73\n9\t76307080\t499637:2\tA\t]9:76304638]A\t19\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=499637:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=9:76304638(+)-9:76307080(-)__9_76293001_76318001D;SPAN=2442;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:26:19.1:19.1,0,45.5:0:8:-19.1:19.73\n9\t76940846\t499922:1\tA\tA[9:76943186[\t66\tPASS\tEVDNC=ASSMB;HOMSEQ=TAA;MAPQ=60;MATEID=499922:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_76930001_76955001_81C;SPAN=2340;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:23:33:14:66.8,0,14:23:0:-68.34:68.34\n9\t76943186\t499922:2\tT\t]9:76940846]T\t66\tPASS\tEVDNC=ASSMB;HOMSEQ=TAA;MAPQ=60;MATEID=499922:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_76930001_76955001_81C;SPAN=2340;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:23:33:14:66.8,0,14:23:0:-68.34:68.34\n9\t79110862\t500588:1\tT\tT[9:79111167[\t33\tPASS\tEVDNC=ASSMB;HOMSEQ=CTAATGCAGGATTTTCT;MAPQ=60;MATEID=500588:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_9_79110501_79135501_48C;SPAN=305;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:22:20.3:33.5,0,20.3:12:0:-33.55:33.55\n9\t79111167\t500588:2\tC\t]9:79110862]C\t33\tPASS\tEVDNC=ASSMB;HOMSEQ=CTAATGCAGGATTTTCT;MAPQ=60;MATEID=500588:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_9_79110501_79135501_48C;SPAN=305;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:22:20.3:33.5,0,20.3:12:0:-33.55:33.55\n9\t80230263\t500915:1\tT\tT[9:80230583[\t35\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TTTTTCTT;MAPQ=60;MATEID=500915:2;MATENM=1;NM=3;NUMPARTS=2;SCTG=c_9_80213001_80238001_109C;SPAN=320;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:28:35:35,0,35:7:9:-35.04:35.04\n9\t80230583\t500915:2\tT\t]9:80230263]T\t35\tPASS\tDISC_MAPQ=54;EVDNC=ASDIS;HOMSEQ=TTTTTCTT;MAPQ=60;MATEID=500915:1;MATENM=3;NM=1;NUMPARTS=2;SCTG=c_9_80213001_80238001_109C;SPAN=320;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:28:35:35,0,35:7:9:-35.04:35.04\n9\t81353010\t501453:1\tC\tC[9:81355769[\t60\tPASS\tEVDNC=ASSMB;HOMSEQ=TTTATAGC;MAPQ=60;MATEID=501453:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_81340001_81365001_30C;SPAN=2759;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:21:33:20.6:60.2,0,20.6:21:0:-60.95:60.95\n9\t81355769\t501453:2\tT\t]9:81353010]T\t60\tPASS\tEVDNC=ASSMB;HOMSEQ=TTTATAGC;MAPQ=60;MATEID=501453:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_81340001_81365001_30C;SPAN=2759;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:21:33:20.6:60.2,0,20.6:21:0:-60.95:60.95\n9\t81709448\t501562:1\tC\tC[9:81712012[\t7\tPASS\tEVDNC=ASSMB;HOMSEQ=TAAAATGGCTCTAGC;MAPQ=60;MATEID=501562:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_81707501_81732501_4C;SPAN=2564;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:27:292:7.3:7.3,0,726.8:27:0:-7.048:50.93\n9\t81712012\t501562:2\tT\t]9:81709448]T\t7\tPASS\tEVDNC=ASSMB;HOMSEQ=TAAAATGGCTCTAGC;MAPQ=60;MATEID=501562:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_81707501_81732501_4C;SPAN=2564;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:27:292:7.3:7.3,0,726.8:27:0:-7.048:50.93\n9\t83888182\t502921:1\tC\t[9:85841178[C\t14\tPASS\tDISC_MAPQ=51;EVDNC=DSCRD;IMPRECISE;MAPQ=51;MATEID=502921:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=9:83888182(-)-9:85841178(-)__9_85823501_85848501D;SPAN=1952996;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:41:14.9:14.9,0,87.5:0:8:-14.88:17.89\n9\t85286501\t502766:1\tT\tT[9:85286798[\t41\tPASS\tEVDNC=ASSMB;HOMSEQ=TACATGTCTTT;MAPQ=60;MATEID=502766:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_85284501_85309501_72C;SPAN=297;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:15:31:34.4:41,0,34.4:15:0:-40.81:40.81\n9\t85286798\t502766:2\tT\t]9:85286501]T\t41\tPASS\tEVDNC=ASSMB;HOMSEQ=TACATGTCTTT;MAPQ=60;MATEID=502766:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_85284501_85309501_72C;SPAN=297;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:15:31:34.4:41,0,34.4:15:0:-40.81:40.81\n9\t85841178\t502921:2\tT\t[9:83888182[T\t14\tPASS\tDISC_MAPQ=58;EVDNC=DSCRD;IMPRECISE;MAPQ=58;MATEID=502921:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=9:83888182(-)-9:85841178(-)__9_85823501_85848501D;SPAN=1952996;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:41:14.9:14.9,0,87.5:0:8:-14.88:17.89\n9\t86052951\t502981:1\tA\t]9:86053805]A\t38\tPASS\tDISC_MAPQ=22;EVDNC=DSCRD;IMPRECISE;MAPQ=22;MATEID=502981:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=9:86052951(-)-9:86053805(+)__9_86044001_86069001D;SPAN=854;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:16:51:38.6:38.6,0,88.1:0:16:-38.48:39.62\n9\t86053805\t502981:2\tA\tA[9:86052951[\t38\tPASS\tDISC_MAPQ=41;EVDNC=DSCRD;IMPRECISE;MAPQ=41;MATEID=502981:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=9:86052951(-)-9:86053805(+)__9_86044001_86069001D;SPAN=854;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:16:51:38.6:38.6,0,88.1:0:16:-38.48:39.62\n9\t86539642\t503199:1\tT\tT[9:86541032[\t99\tPASS\tDISC_MAPQ=60;EVDNC=TSI_G;HOMSEQ=A;INSERTION=TATTGTGGGCCATGCCTTTTGATCATATTAGCTAGCAAGAGCTCCAGGTTTCCTCTCCATAATGAAAATTTTTGAGCCTAACAATAGTCAA;MAPQ=60;MATEID=503199:2;MATENM=3;NM=1;NUMPARTS=3;SCTG=c_9_86534001_86559001_5C;SPAN=1390;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:38:14:10.5:115.5,10.5,0:37:5:-115.5:115.5\n9\t86541032\t503199:2\tA\t]9:86539642]A\t99\tPASS\tDISC_MAPQ=60;EVDNC=TSI_G;HOMSEQ=A;INSERTION=TATTGTGGGCCATGCCTTTTGATCATATTAGCTAGCAAGAGCTCCAGGTTTCCTCTCCATAATGAAAATTTTTGAGCCTAACAATAGTCAA;MAPQ=60;MATEID=503199:1;MATENM=1;NM=3;NUMPARTS=3;SCTG=c_9_86534001_86559001_5C;SPAN=1390;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:38:14:10.5:115.5,10.5,0:37:5:-115.5:115.5\n9\t87184187\t503415:1\tT\tT[9:87184493[\t47\tPASS\tEVDNC=ASSMB;HOMSEQ=AATTTTTTT;MAPQ=60;MATEID=503415:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_87171001_87196001_87C;SPAN=306;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:17:32:30.8:47.3,0,30.8:17:0:-47.25:47.25\n9\t87184493\t503415:2\tA\t]9:87184187]A\t47\tPASS\tEVDNC=ASSMB;HOMSEQ=AATTTTTTT;MAPQ=60;MATEID=503415:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_87171001_87196001_87C;SPAN=306;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:17:32:30.8:47.3,0,30.8:17:0:-47.25:47.25\n9\t88244081\t503895:1\tT\tT[9:88246049[\t99\tPASS\tEVDNC=ASSMB;HOMSEQ=TTATGTACCTTTT;MAPQ=60;MATEID=503895:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_9_88224501_88249501_5C;SPAN=1968;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:45:52:4.5:138.6,4.5,0:45:0:-143:143\n9\t88246049\t503895:2\tT\t]9:88244081]T\t99\tPASS\tEVDNC=ASSMB;HOMSEQ=TTATGTACCTTTT;MAPQ=60;MATEID=503895:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_9_88224501_88249501_5C;SPAN=1968;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:45:52:4.5:138.6,4.5,0:45:0:-143:143\n9\t88370208\t516185:1\tG\t]9:125174450]G\t36\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=516185:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_125170501_125195501_40C;SPAN=36804242;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:23:20:36.5,0,20:13:0:-36.66:36.66\n9\t88370788\t516187:1\tC\tC[9:125174450[\t53\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=516187:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_125170501_125195501_111C;SPAN=36803662;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:18:23:3.5:53,0,3.5:18:0:-55.29:55.29\n9\t88385279\t503963:1\tT\tT[20:47190406[\t35\tPASS\tEVDNC=ASSMB;INSERTION=CAAAGCTAAAAAATGTAGG;MAPQ=60;MATEID=503963:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_88371501_88396501_10C;SPAN=-1;SUBN=2;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:28:35:35,0,35:13:0:-35.04:35.04\n9\t89437208\t504384:2\tA\t]1:109198402]A\t42\tPASS\tEVDNC=ASSMB;INSERTION=ACCATATATATAAATGTATGGCTGGAGA;MAPQ=60;MATEID=504384:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_89425001_89450001_6C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:15:25:19.4:42.5,0,19.4:15:0:-42.9:42.9\n9\t89730120\t504478:1\tA\t]9:89730492]A\t13\tPASS\tDISC_MAPQ=30;EVDNC=DSCRD;IMPRECISE;MAPQ=30;MATEID=504478:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=9:89730120(-)-9:89730492(+)__9_89719001_89744001D;SPAN=372;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:45:13.7:13.7,0,99.5:0:8:-13.76:17.53\n9\t89730492\t504478:2\tG\tG[9:89730120[\t13\tPASS\tDISC_MAPQ=54;EVDNC=DSCRD;IMPRECISE;MAPQ=54;MATEID=504478:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=9:89730120(-)-9:89730492(+)__9_89719001_89744001D;SPAN=372;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:45:13.7:13.7,0,99.5:0:8:-13.76:17.53\n9\t89854059\t509734:1\tT\tT]9:107177389]\t27\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;INSERTION=A;MAPQ=60;MATEID=509734:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_107163001_107188001_56C;SPAN=17323330;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:20:20.9:27.5,0,20.9:9:4:-27.41:27.41\n9\t90432262\t504759:2\tT\tT[8:63059041[\t25\tPASS\tDISC_MAPQ=255;EVDNC=TSI_G;HOMSEQ=TTTTTTTTTGAGACGG;INSERTION=TTTTTTGTTGTTGTTG;MAPQ=60;MATEID=504759:1;MATENM=0;NM=2;NUMPARTS=3;SCTG=c_9_90429501_90454501_9C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:28:25.1:25.1,0,44.9:10:0:-25.14:25.46\n9\t93708073\t505789:1\tC\tC[9:93709183[\t20\tPASS\tEVDNC=ASSMB;HOMSEQ=C;MAPQ=60;MATEID=505789:2;MATENM=4;NM=0;NUMPARTS=2;SCTG=c_9_93688001_93713001_43C;SPAN=1110;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:21:20.6:20.6,0,30.5:8:0:-20.51:20.65\n9\t93709183\t505789:2\tC\t]9:93708073]C\t20\tPASS\tEVDNC=ASSMB;HOMSEQ=C;MAPQ=60;MATEID=505789:1;MATENM=0;NM=4;NUMPARTS=2;SCTG=c_9_93688001_93713001_43C;SPAN=1110;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:21:20.6:20.6,0,30.5:8:0:-20.51:20.65\n9\t93737881\t505800:1\tT\tT[9:93740761[\t49\tPASS\tEVDNC=ASSMB;HOMSEQ=ACT;MAPQ=60;MATEID=505800:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_93737001_93762001_14C;SPAN=2880;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:17:17:4.5:49.5,4.5,0:17:0:-49.51:49.51\n9\t93740761\t505800:2\tA\t]9:93737881]A\t49\tPASS\tEVDNC=ASSMB;HOMSEQ=ACT;MAPQ=60;MATEID=505800:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_93737001_93762001_14C;SPAN=2880;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:17:17:4.5:49.5,4.5,0:17:0:-49.51:49.51\n9\t94543397\t505978:2\tG\t[4:135169406[G\t22\tPASS\tDISC_MAPQ=30;EVDNC=DSCRD;IMPRECISE;MAPQ=30;MATEID=505978:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=4:135169406(-)-9:94543397(-)__9_94521001_94546001D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:14:12.5:22.4,0,12.5:0:8:-22.62:22.62\n9\t96822325\t506693:1\tA\t]9:96896934]A\t58\tPASS\tEVDNC=ASSMB;HOMSEQ=AGT;MAPQ=60;MATEID=506693:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_96873001_96898001_3C;SPAN=74609;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:20:27:8.9:58.4,0,8.9:20:0:-60.44:60.44\n9\t96896934\t506693:2\tT\tT[9:96822325[\t58\tPASS\tEVDNC=ASSMB;HOMSEQ=AGT;MAPQ=60;MATEID=506693:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_96873001_96898001_3C;SPAN=74609;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:20:27:8.9:58.4,0,8.9:20:0:-60.44:60.44\n9\t97902289\t405771:2\tT\t[7:74689123[T\t55\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;INSERTION=GCTGTAAAAATAATAAAAATAATAAACGGAGCTGCCTGGAGGCGGCCGCACTCG;MAPQ=60;MATEID=405771:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_74676001_74701001_30C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:21:50:55.4:55.4,0,68.6:19:2:-55.27:55.37\n9\t98546766\t507067:1\tA\tA[9:98549383[\t99\tPASS\tEVDNC=ASSMB;HOMSEQ=TCTCA;MAPQ=60;MATEID=507067:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_98539001_98564001_7C;SPAN=2617;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:41:46:9.3:132,9.3,0:41:0:-131.9:131.9\n9\t98549383\t507067:2\tT\t]9:98546766]T\t99\tPASS\tEVDNC=ASSMB;HOMSEQ=TCTCA;MAPQ=60;MATEID=507067:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_98539001_98564001_7C;SPAN=2617;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:41:46:9.3:132,9.3,0:41:0:-131.9:131.9\n9\t98577128\t507084:1\tA\t]9:98577228]A\t25\tPASS\tEVDNC=ASSMB;HOMSEQ=ATGGATGGATGGATGGATGGATGGA;MAPQ=60;MATEID=507084:2;MATENM=0;NM=4;NUMPARTS=2;SCTG=c_9_98563501_98588501_62C;SPAN=100;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:15:87:25.1:25.1,0,193.4:15:0:-25.06:32.65\n9\t98577228\t507084:2\tA\tA[9:98577128[\t25\tPASS\tEVDNC=ASSMB;HOMSEQ=ATGGATGGATGGATGGATGGATGGA;MAPQ=60;MATEID=507084:1;MATENM=4;NM=0;NUMPARTS=2;SCTG=c_9_98563501_98588501_62C;SPAN=100;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:15:87:25.1:25.1,0,193.4:15:0:-25.06:32.65\n9\t98585704\t507086:1\tT\tT[9:98586035[\t29\tPASS\tEVDNC=ASSMB;HOMSEQ=T;MAPQ=60;MATEID=507086:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_98563501_98588501_72C;SPAN=331;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:38:29:29,0,65.3:12:0:-28.93:29.75\n9\t98586035\t507086:2\tT\t]9:98585704]T\t29\tPASS\tEVDNC=ASSMB;HOMSEQ=T;MAPQ=60;MATEID=507086:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_98563501_98588501_72C;SPAN=331;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:38:29:29,0,65.3:12:0:-28.93:29.75\n9\t98712914\t917272:1\tC\t]22:32179921]C\t46\tPASS\tDISC_MAPQ=42;EVDNC=DSCRD;IMPRECISE;MAPQ=57;MATEID=917272:2;MATENM=1;NM=7;NUMPARTS=3;SCTG=c_22_32168501_32193501_13C;SECONDARY;SPAN=-1;SUBN=1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:16:10:4.2:46.2,4.2,0:11:9:-46.21:46.21\n9\t98715302\t917274:1\tT\tT[22:32179925[\t62\tPASS\tDISC_MAPQ=30;EVDNC=ASDIS;INSERTION=GCATGGTGAGTCT;MAPQ=60;MATEID=917274:2;MATENM=2;NM=35;NUMPARTS=2;SCTG=c_22_32168501_32193501_27C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:21:10:5.7:62.7,5.7,0:19:7:-62.72:62.72\n9\t101419834\t507872:1\tC\t]9:101420140]C\t9\tPASS\tEVDNC=ASSMB;HOMSEQ=CA;MAPQ=60;MATEID=507872:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_9_101405501_101430501_15C;SPAN=306;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:59:9.8:9.8,0,138.5:8:0:-9.824:16.5\n9\t101420140\t507872:2\tA\tA[9:101419834[\t9\tPASS\tEVDNC=ASSMB;HOMSEQ=CA;MAPQ=60;MATEID=507872:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_9_101405501_101430501_15C;SPAN=306;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:59:9.8:9.8,0,138.5:8:0:-9.824:16.5\n9\t101681697\t508021:1\tT\tT[9:101682446[\t99\tPASS\tEVDNC=ASSMB;HOMSEQ=GAATATATCCCTATTCTT;MAPQ=60;MATEID=508021:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_101675001_101700001_19C;SPAN=749;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:41:22:11.4:125.4,11.4,0:41:0:-125.4:125.4\n9\t101682446\t508021:2\tG\t]9:101681697]G\t99\tPASS\tEVDNC=ASSMB;HOMSEQ=GAATATATCCCTATTCTT;MAPQ=60;MATEID=508021:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_101675001_101700001_19C;SPAN=749;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:41:22:11.4:125.4,11.4,0:41:0:-125.4:125.4\n9\t101898793\t508069:1\tA\tA[9:101905675[\t79\tPASS\tEVDNC=ASSMB;HOMSEQ=GA;MAPQ=60;MATEID=508069:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_101895501_101920501_47C;SPAN=6882;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:26:31:1.8:79.2,1.8,0:26:0:-81.69:81.69\n9\t101905675\t508069:2\tG\t]9:101898793]G\t79\tPASS\tEVDNC=ASSMB;HOMSEQ=GA;MAPQ=60;MATEID=508069:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_101895501_101920501_47C;SPAN=6882;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:26:31:1.8:79.2,1.8,0:26:0:-81.69:81.69\n9\t102716959\t508265:1\tT\t]9:102730923]T\t36\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TTG;MAPQ=60;MATEID=508265:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_102728501_102753501_236C;SPAN=13964;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:24:23:36.2,0,23:9:9:-36.29:36.29\n9\t102730923\t508265:2\tG\tG[9:102716959[\t36\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TTG;MAPQ=60;MATEID=508265:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_102728501_102753501_236C;SPAN=13964;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:24:23:36.2,0,23:9:9:-36.29:36.29\n9\t103806086\t508606:1\tT\tT[9:103807448[\t26\tPASS\tDISC_MAPQ=53;EVDNC=DSCRD;IMPRECISE;MAPQ=53;MATEID=508606:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=9:103806086(+)-9:103807448(-)__9_103782001_103807001D;SPAN=1362;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:9:4:2.4:26.4,2.4,0:0:9:-26.41:26.41\n9\t103807448\t508606:2\tA\t]9:103806086]A\t26\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=508606:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=9:103806086(+)-9:103807448(-)__9_103782001_103807001D;SPAN=1362;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:9:4:2.4:26.4,2.4,0:0:9:-26.41:26.41\n9\t104334655\t508742:1\tG\tG[9:104335428[\t17\tPASS\tEVDNC=ASSMB;INSERTION=AATTTATTATCTA;MAPQ=60;MATEID=508742:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_104321001_104346001_28C;SPAN=773;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:44:17.3:17.3,0,93.2:9:0:-17.34:20.33\n9\t104335428\t508742:2\tT\t]9:104334655]T\t17\tPASS\tEVDNC=ASSMB;INSERTION=AATTTATTATCTA;MAPQ=60;MATEID=508742:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_104321001_104346001_28C;SPAN=773;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:44:17.3:17.3,0,93.2:9:0:-17.34:20.33\n9\t104600936\t508836:1\tT\t]9:104607160]T\t46\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TCTAATTTCTTGAAATAAGAAGAAAAATTCTTATTTCCTCCT;MAPQ=60;MATEID=508836:2;MATENM=0;NM=4;NUMPARTS=2;SCTG=c_9_104590501_104615501_30C;SPAN=6224;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:17:34:36.8:46.7,0,36.8:13:5:-46.59:46.59\n9\t104607160\t508836:2\tT\tT[9:104600936[\t46\tPASS\tDISC_MAPQ=46;EVDNC=ASDIS;HOMSEQ=TCTAATTTCTTGAAATAAGAAGAAAAATTCTTATTTCCTCCT;MAPQ=60;MATEID=508836:1;MATENM=4;NM=0;NUMPARTS=2;SCTG=c_9_104590501_104615501_30C;SPAN=6224;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:17:34:36.8:46.7,0,36.8:13:5:-46.59:46.59\n9\t104638707\t508859:1\tT\tT[9:104639007[\t45\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AAAAAAATCCTCCTT;MAPQ=60;MATEID=508859:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_9_104615001_104640001_147C;SPAN=300;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:16:25:16.1:45.8,0,16.1:12:6:-46.5:46.5\n9\t104639007\t508859:2\tA\t]9:104638707]A\t45\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AAAAAAATCCTCCTT;MAPQ=60;MATEID=508859:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_9_104615001_104640001_147C;SPAN=300;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:16:25:16.1:45.8,0,16.1:12:6:-46.5:46.5\n9\t104854285\t508919:2\tT\t[1:109194083[T\t44\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;INSERTION=AATGTCTCCAGGACATTTTTGTATA;MAPQ=60;MATEID=508919:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_104835501_104860501_16C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:15:20:4.4:44,0,4.4:12:10:-45.49:45.49\n9\t105054371\t509026:1\tT\t[9:105055067[T\t99\tPASS\tDISC_MAPQ=59;EVDNC=ASDIS;INSERTION=ACATACATAACTAGA;MAPQ=60;MATEID=509026:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_9_105031501_105056501_7C;SPAN=696;SUBN=1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:47:62:15.8:137.9,0,15.8:31:30:-143:143\n9\t105055067\t509026:2\tC\t[9:105054371[C\t99\tPASS\tDISC_MAPQ=57;EVDNC=ASDIS;INSERTION=ACATACATAACTAGA;MAPQ=60;MATEID=509026:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_9_105031501_105056501_7C;SPAN=696;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:47:62:15.8:137.9,0,15.8:31:30:-143:143\n9\t106261848\t509449:1\tT\tT[9:106262147[\t75\tPASS\tEVDNC=ASSMB;HOMSEQ=AAGAATAAACCTT;MAPQ=60;MATEID=509449:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_106256501_106281501_16C;SPAN=299;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:25:25:6.9:75.9,6.9,0:25:0:-75.92:75.92\n9\t106262147\t509449:2\tA\t]9:106261848]A\t75\tPASS\tEVDNC=ASSMB;HOMSEQ=AAGAATAAACCTT;MAPQ=60;MATEID=509449:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_106256501_106281501_16C;SPAN=299;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:25:25:6.9:75.9,6.9,0:25:0:-75.92:75.92\n9\t106788574\t509629:2\tC\tC[4:170678003[\t20\tPASS\tDISC_MAPQ=27;EVDNC=DSCRD;IMPRECISE;MAPQ=27;MATEID=509629:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=4:170678003(-)-9:106788574(+)__9_106771001_106796001D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:22:20.3:20.3,0,33.5:0:8:-20.22:20.45\n9\t107177389\t509734:2\tT\tT]9:89854059]\t27\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;INSERTION=A;MAPQ=60;MATEID=509734:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_107163001_107188001_56C;SPAN=17323330;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:20:20.9:27.5,0,20.9:9:4:-27.41:27.41\n9\t107182828\t760282:1\tA\tA[16:31371775[\t24\tPASS\tEVDNC=ASSMB;INSERTION=TATATACATTAAACAA;MAPQ=60;MATEID=760282:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_16_31360001_31385001_63C;SPAN=-1;SUBN=1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:19:21.2:24.5,0,21.2:9:0:-24.37:24.37\n9\t107256005\t509779:1\tT\tT[9:107258568[\t99\tPASS\tEVDNC=ASSMB;HOMSEQ=ATAAATCTT;MAPQ=60;MATEID=509779:2;MATENM=0;NM=3;NUMPARTS=2;SCTG=c_9_107236501_107261501_40C;SPAN=2563;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:46:67:34.1:133.1,0,34.1:46:0:-136.1:136.1\n9\t107258568\t509779:2\tA\t]9:107256005]A\t99\tPASS\tEVDNC=ASSMB;HOMSEQ=ATAAATCTT;MAPQ=60;MATEID=509779:1;MATENM=3;NM=0;NUMPARTS=2;SCTG=c_9_107236501_107261501_40C;SPAN=2563;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:46:67:34.1:133.1,0,34.1:46:0:-136.1:136.1\n9\t107271163\t509785:1\tT\tT[9:107273174[\t99\tPASS\tEVDNC=ASSMB;INSERTION=A;MAPQ=60;MATEID=509785:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_107261001_107286001_70C;SPAN=2011;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:32:33:9:99,9,0:32:0:-99.02:99.02\n9\t107273174\t509785:2\tA\t]9:107271163]A\t99\tPASS\tEVDNC=ASSMB;INSERTION=A;MAPQ=60;MATEID=509785:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_107261001_107286001_70C;SPAN=2011;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:32:33:9:99,9,0:32:0:-99.02:99.02\n9\t107775254\t509965:1\tA\tA[9:107778315[\t89\tPASS\tEVDNC=ASSMB;HOMSEQ=TAAAAATATTTTGTA;MAPQ=60;MATEID=509965:2;MATENM=1;NM=3;NUMPARTS=2;SCTG=c_9_107775501_107800501_26C;SPAN=3061;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:29:9:8.1:89.1,8.1,0:29:0:-89.12:89.12\n9\t107778315\t509965:2\tT\t]9:107775254]T\t89\tPASS\tEVDNC=ASSMB;HOMSEQ=TAAAAATATTTTGTA;MAPQ=60;MATEID=509965:1;MATENM=3;NM=1;NUMPARTS=2;SCTG=c_9_107775501_107800501_26C;SPAN=3061;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:29:9:8.1:89.1,8.1,0:29:0:-89.12:89.12\n9\t108352880\t427922:2\tT\t[7:134739891[T\t26\tPASS\tDISC_MAPQ=0;EVDNC=ASDIS;HOMSEQ=TAAAATTATG;MAPQ=60;MATEID=427922:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_134725501_134750501_66C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:9:8:2.4:26.4,2.4,0:8:2:-26.41:26.41\n9\t109410883\t510495:2\tG\t]8:103833107]G\t32\tPASS\tEVDNC=ASSMB;INSERTION=GCATTTTTT;MAPQ=60;MATEID=510495:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_109392501_109417501_62C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:25:29.3:32.6,0,29.3:12:0:-32.59:32.59\n9\t109523566\t510532:1\tA\t]9:109524282]A\t91\tPASS\tEVDNC=ASSMB;INSERTION=TGA;MAPQ=60;MATEID=510532:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_9_109515001_109540001_9C;SPAN=716;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:31:38:2.6:91.7,0,2.6:31:0:-96.48:96.48\n9\t109524282\t510532:2\tC\tC[9:109523566[\t91\tPASS\tEVDNC=ASSMB;INSERTION=TGA;MAPQ=60;MATEID=510532:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_9_109515001_109540001_9C;SPAN=716;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:31:38:2.6:91.7,0,2.6:31:0:-96.48:96.48\n9\t111642641\t511441:2\tA\tA[2:130210907[\t42\tPASS\tDISC_MAPQ=30;EVDNC=ASDIS;HOMSEQ=A;MAPQ=60;MATEID=511441:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_111622001_111647001_71C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:15:24:16.4:42.8,0,16.4:15:2:-43.34:43.34\n9\t112100475\t321578:2\tC\tC]5:179299294]\t42\tPASS\tDISC_MAPQ=10;EVDNC=ASDIS;HOMSEQ=GGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGC;MAPQ=31;MATEID=321578:1;MATENM=9;NM=4;NUMPARTS=2;SCTG=c_5_179291001_179316001_13C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:14:7:3.9:42.9,3.9,0:12:2:-42.91:42.91\n9\t112140079\t511668:1\tG\tG[9:112140378[\t29\tPASS\tEVDNC=ASSMB;HOMSEQ=AAAAAATACAAAAATTG;MAPQ=60;MATEID=511668:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_9_112136501_112161501_10C;SPAN=299;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:23:26.6:29.9,0,26.6:11:0:-29.85:29.85\n9\t112140378\t511668:2\tA\t]9:112140079]A\t29\tPASS\tEVDNC=ASSMB;HOMSEQ=AAAAAATACAAAAATTG;MAPQ=60;MATEID=511668:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_9_112136501_112161501_10C;SPAN=299;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:23:26.6:29.9,0,26.6:11:0:-29.85:29.85\n9\t113174817\t512193:1\tA\tA[9:113175100[\t99\tPASS\tEVDNC=ASSMB;HOMSEQ=AAGAGCTAGGGAA;MAPQ=60;MATEID=512193:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_9_113165501_113190501_64C;SPAN=283;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:35:27:9.6:105.6,9.6,0:35:0:-105.6:105.6\n9\t113175100\t512193:2\tA\t]9:113174817]A\t99\tPASS\tEVDNC=ASSMB;HOMSEQ=AAGAGCTAGGGAA;MAPQ=60;MATEID=512193:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_9_113165501_113190501_64C;SPAN=283;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:35:27:9.6:105.6,9.6,0:35:0:-105.6:105.6\n9\t115473327\t513034:1\tG\tG[9:115478586[\t58\tPASS\tDISC_MAPQ=58;EVDNC=DSCRD;IMPRECISE;MAPQ=58;MATEID=513034:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=9:115473327(+)-9:115478586(-)__9_115468501_115493501D;SPAN=5259;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:21:40:41.6:58.1,0,41.6:0:21:-58.2:58.2\n9\t115478586\t513034:2\tC\t]9:115473327]C\t58\tPASS\tDISC_MAPQ=23;EVDNC=DSCRD;IMPRECISE;MAPQ=23;MATEID=513034:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=9:115473327(+)-9:115478586(-)__9_115468501_115493501D;SPAN=5259;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:21:40:41.6:58.1,0,41.6:0:21:-58.2:58.2\n9\t116620017\t513469:1\tA\tA[9:116895019[\t29\tPASS\tEVDNC=ASSMB;HOMSEQ=AA;MAPQ=60;MATEID=513469:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_116889501_116914501_6C;SPAN=275002;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:14:5.9:29,0,5.9:10:0:-29.91:29.91\n9\t116714798\t513418:1\tG\tG[9:116715119[\t52\tPASS\tEVDNC=ASSMB;HOMSEQ=AAGAATCATGTGAG;MAPQ=60;MATEID=513418:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_116693501_116718501_2C;SPAN=321;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:18:16:4.8:52.8,4.8,0:18:0:-52.81:52.81\n9\t116715119\t513418:2\tA\t]9:116714798]A\t52\tPASS\tEVDNC=ASSMB;HOMSEQ=AAGAATCATGTGAG;MAPQ=60;MATEID=513418:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_116693501_116718501_2C;SPAN=321;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:18:16:4.8:52.8,4.8,0:18:0:-52.81:52.81\n9\t116756723\t513444:1\tC\tC[9:116882005[\t69\tPASS\tEVDNC=ASSMB;INSERTION=A;MAPQ=60;MATEID=513444:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_9_116742501_116767501_27C;SPAN=125282;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:23:8:6.3:69.3,6.3,0:23:0:-69.32:69.32\n9\t116773796\t513457:1\tA\tA[9:116820072[\t39\tPASS\tEVDNC=ASSMB;HOMSEQ=A;MAPQ=60;MATEID=513457:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_9_116816001_116841001_30C;SPAN=46276;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:13:3:3.6:39.6,3.6,0:13:0:-39.61:39.61\n9\t116820072\t513457:2\tA\t]9:116773796]A\t39\tPASS\tEVDNC=ASSMB;HOMSEQ=A;MAPQ=60;MATEID=513457:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_9_116816001_116841001_30C;SPAN=46276;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:13:3:3.6:39.6,3.6,0:13:0:-39.61:39.61\n9\t116882005\t513444:2\tC\t]9:116756723]C\t69\tPASS\tEVDNC=ASSMB;INSERTION=A;MAPQ=60;MATEID=513444:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_9_116742501_116767501_27C;SPAN=125282;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:23:8:6.3:69.3,6.3,0:23:0:-69.32:69.32\n9\t116895019\t513469:2\tA\t]9:116620017]A\t29\tPASS\tEVDNC=ASSMB;HOMSEQ=AA;MAPQ=60;MATEID=513469:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_116889501_116914501_6C;SPAN=275002;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:14:5.9:29,0,5.9:10:0:-29.91:29.91\n9\t117057123\t513582:1\tG\t]9:117100182]G\t41\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=513582:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_117085501_117110501_29C;SPAN=43059;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:18:1.7:41.3,0,1.7:14:0:-42.92:42.92\n9\t117100182\t513582:2\tG\tG[9:117057123[\t41\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=513582:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_117085501_117110501_29C;SPAN=43059;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:18:1.7:41.3,0,1.7:14:0:-42.92:42.92\n9\t117377297\t723297:1\tT\t[15:29700693[T\t39\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=723297:2;MATENM=0;NM=0;NUMPARTS=3;SCTG=c_15_29694001_29719001_68C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:13:13:3.6:39.6,3.6,0:6:8:-39.61:39.61\n9\t118242011\t513972:1\tC\t]9:118247603]C\t17\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=513972:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=9:118242011(-)-9:118247603(+)__9_118237001_118262001D;SPAN=5592;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:46:17:17,0,96.2:0:9:-16.78:20.14\n9\t118247603\t513972:2\tA\tA[9:118242011[\t17\tPASS\tDISC_MAPQ=56;EVDNC=DSCRD;IMPRECISE;MAPQ=56;MATEID=513972:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=9:118242011(-)-9:118247603(+)__9_118237001_118262001D;SPAN=5592;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:46:17:17,0,96.2:0:9:-16.78:20.14\n9\t119030599\t514253:1\tT\tT[9:119031168[\t13\tPASS\tEVDNC=ASSMB;HOMSEQ=T;MAPQ=60;MATEID=514253:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_119021001_119046001_3C;SPAN=569;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:7:34:13.7:13.7,0,69.8:7:0:-13.55:15.84\n9\t119031168\t514253:2\tT\t]9:119030599]T\t13\tPASS\tEVDNC=ASSMB;HOMSEQ=T;MAPQ=60;MATEID=514253:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_119021001_119046001_3C;SPAN=569;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:7:34:13.7:13.7,0,69.8:7:0:-13.55:15.84\n9\t119769567\t514485:1\tC\tC[9:119769875[\t72\tPASS\tEVDNC=ASSMB;HOMSEQ=AAGAAAATTGC;MAPQ=60;MATEID=514485:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_119756001_119781001_19C;SPAN=308;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:23:24:6.6:72.6,6.6,0:23:0:-72.62:72.62\n9\t119769875\t514485:2\tA\t]9:119769567]A\t72\tPASS\tEVDNC=ASSMB;HOMSEQ=AAGAAAATTGC;MAPQ=60;MATEID=514485:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_119756001_119781001_19C;SPAN=308;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:23:24:6.6:72.6,6.6,0:23:0:-72.62:72.62\n9\t119887340\t748564:1\tT\t]16:909933]T\t32\tPASS\tEVDNC=ASSMB;HOMSEQ=TG;MAPQ=60;MATEID=748564:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_16_906501_931501_32C;SPAN=-1;SUBN=3;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:25:29.3:32.6,0,29.3:12:0:-32.59:32.59\n9\t120805084\t514776:2\tA\t[4:169821466[A\t21\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;MAPQ=60;MATEID=514776:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_120785001_120810001_13C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:29:21.5:21.5,0,51.2:6:3:-21.56:22.23\n9\t120805215\t266207:2\tG\tG]4:169866444]\t25\tPASS\tDISC_MAPQ=48;EVDNC=ASDIS;HOMSEQ=CA;MAPQ=60;MATEID=266207:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_4_169858501_169883501_16C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:16:12.2:25.4,0,12.2:4:6:-25.35:25.35\n9\t120965446\t514833:1\tG\tG[9:120965847[\t18\tPASS\tEVDNC=ASSMB;HOMSEQ=CTGG;MAPQ=60;MATEID=514833:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_120956501_120981501_77C;SPAN=401;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:41:18.2:18.2,0,84.2:9:0:-18.18:20.65\n9\t120965847\t514833:2\tC\t]9:120965446]C\t18\tPASS\tEVDNC=ASSMB;HOMSEQ=CTGG;MAPQ=60;MATEID=514833:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_120956501_120981501_77C;SPAN=401;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:41:18.2:18.2,0,84.2:9:0:-18.18:20.65\n9\t121464631\t514986:1\tA\t]9:121465541]A\t49\tPASS\tEVDNC=ASSMB;INSERTION=AAACA;MAPQ=60;MATEID=514986:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_9_121446501_121471501_60C;SPAN=910;SUBN=5;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:19:47:49.7:49.7,0,66.2:19:0:-49.51:49.68\n9\t121465541\t514986:2\tA\tA[9:121464631[\t49\tPASS\tEVDNC=ASSMB;INSERTION=AAACA;MAPQ=60;MATEID=514986:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_9_121446501_121471501_60C;SPAN=910;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:19:47:49.7:49.7,0,66.2:19:0:-49.51:49.68\n9\t122576590\t864265:1\tG\t]20:15095882]G\t29\tPASS\tEVDNC=ASSMB;INSERTION=T;MAPQ=60;MATEID=864265:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_15092001_15117001_11C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:10:7:2.7:29.7,2.7,0:10:0:-29.71:29.71\n9\t122577102\t864334:1\tA\tA[20:15405783[\t39\tPASS\tEVDNC=ASSMB;HOMSEQ=AA;MAPQ=60;MATEID=864334:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_15386001_15411001_1C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:13:12:3.6:39.6,3.6,0:13:0:-39.61:39.61\n9\t123223155\t515633:1\tC\t]9:123448482]C\t41\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=CAG;MAPQ=60;MATEID=515633:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_123431001_123456001_31C;SPAN=225327;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:15:29:31.4:41.3,0,31.4:10:10:-41.43:41.43\n9\t123383698\t515665:1\tG\t]9:123559605]G\t24\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=515665:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=9:123383698(-)-9:123559605(+)__9_123553501_123578501D;SPAN=175907;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:31:24.5:24.5,0,50.9:0:10:-24.3:24.91\n9\t123448482\t515633:2\tG\tG[9:123223155[\t41\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=CAG;MAPQ=60;MATEID=515633:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_123431001_123456001_31C;SPAN=225327;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:15:29:31.4:41.3,0,31.4:10:10:-41.43:41.43\n9\t123559605\t515665:2\tT\tT[9:123383698[\t24\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=515665:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=9:123383698(-)-9:123559605(+)__9_123553501_123578501D;SPAN=175907;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:31:24.5:24.5,0,50.9:0:10:-24.3:24.91\n9\t124441172\t516013:1\tC\t]9:124656822]C\t22\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;MAPQ=60;MATEID=516013:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_124656001_124681001_23C;SPAN=215650;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:15:15.5:22.1,0,15.5:4:7:-22.25:22.25\n9\t124656822\t516013:2\tA\tA[9:124441172[\t22\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;MAPQ=60;MATEID=516013:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_124656001_124681001_23C;SPAN=215650;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:15:15.5:22.1,0,15.5:4:7:-22.25:22.25\n9\t125123053\t836323:1\tC\t[18:74044264[C\t46\tPASS\tDISC_MAPQ=41;EVDNC=ASDIS;INSERTION=AGATA;MAPQ=60;MATEID=836323:2;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_18_74039001_74064001_4C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:15:7:4.2:46.2,4.2,0:12:4:-46.21:46.21\n9\t125123230\t836324:1\tG\tG]18:74044279]\t56\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;MAPQ=60;MATEID=836324:2;MATENM=9;NM=0;NUMPARTS=2;SCTG=c_18_74039001_74064001_2C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:19:7:5.1:56.1,5.1,0:15:6:-56.11:56.11\n9\t125174450\t516187:2\tT\t]9:88370788]T\t53\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=516187:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_125170501_125195501_111C;SPAN=36803662;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:18:23:3.5:53,0,3.5:18:0:-55.29:55.29\n9\t125174450\t516185:2\tT\tT[9:88370208[\t36\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=516185:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_125170501_125195501_40C;SPAN=36804242;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:23:20:36.5,0,20:13:0:-36.66:36.66\n9\t128138847\t517175:1\tC\tC[9:128139780[\t85\tPASS\tDISC_MAPQ=45;EVDNC=ASDIS;HOMSEQ=GGTAAGAGGGGCTGGCTCTCAGTCCC;MAPQ=60;MATEID=517175:2;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_9_128135001_128160001_33C;SPAN=933;SUBN=1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:28:27:7.8:85.8,7.8,0:15:15:-85.82:85.82\n9\t128139780\t517175:2\tG\t]9:128138847]G\t85\tPASS\tDISC_MAPQ=49;EVDNC=ASDIS;HOMSEQ=GGTAAGAGGGGCTGGCTCTCAGTCCC;MAPQ=60;MATEID=517175:1;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_9_128135001_128160001_33C;SPAN=933;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:28:27:7.8:85.8,7.8,0:15:15:-85.82:85.82\n9\t128649826\t517321:1\tC\tC[9:128651644[\t29\tPASS\tDISC_MAPQ=52;EVDNC=DSCRD;IMPRECISE;MAPQ=52;MATEID=517321:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=9:128649826(+)-9:128651644(-)__9_128649501_128674501D;SPAN=1818;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:10:5:2.7:29.7,2.7,0:0:10:-29.71:29.71\n9\t128651644\t517321:2\tG\t]9:128649826]G\t29\tPASS\tDISC_MAPQ=48;EVDNC=DSCRD;IMPRECISE;MAPQ=48;MATEID=517321:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=9:128649826(+)-9:128651644(-)__9_128649501_128674501D;SPAN=1818;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:10:5:2.7:29.7,2.7,0:0:10:-29.71:29.71\n9\t128694869\t517334:2\tT\tT[2:115619092[\t27\tPASS\tEVDNC=ASSMB;HOMSEQ=GTCTCT;MAPQ=60;MATEID=517334:1;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_9_128674001_128699001_56C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:32:27.5:27.5,0,50.6:11:0:-27.32:27.77\n9\t128696493\t517337:2\tA\tA]2:115619217]\t48\tPASS\tDISC_MAPQ=43;EVDNC=DSCRD;IMPRECISE;MAPQ=43;MATEID=517337:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=2:115619217(+)-9:128696493(+)__9_128674001_128699001D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:17:28:21.8:48.2,0,21.8:0:17:-48.77:48.77\n9\t128801967\t517379:1\tT\tT[9:128802259[\t33\tPASS\tEVDNC=ASSMB;HOMSEQ=TGTT;MAPQ=60;MATEID=517379:2;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_9_128796501_128821501_18C;SPAN=292;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:22:20.3:33.5,0,20.3:12:0:-33.55:33.55\n9\t128802259\t517379:2\tT\t]9:128801967]T\t33\tPASS\tEVDNC=ASSMB;HOMSEQ=TGTT;MAPQ=60;MATEID=517379:1;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_9_128796501_128821501_18C;SPAN=292;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:22:20.3:33.5,0,20.3:12:0:-33.55:33.55\n9\t128938673\t517440:1\tT\tT[9:128939830[\t99\tPASS\tDISC_MAPQ=51;EVDNC=ASDIS;HOMSEQ=TTTTTAGTAGAGACGGGGTTCCACCATGTTGGCCAGGCTGGTCTCGAACTCCTGACCTCAGGTGATCCACCCGCCT;MAPQ=60;MATEID=517440:2;MATENM=7;NM=4;NUMPARTS=2;SCTG=c_9_128919001_128944001_27C;SPAN=1157;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:45:6:12.6:138.6,12.6,0:10:38:-138.6:138.6\n9\t128939830\t517440:2\tT\t]9:128938673]T\t99\tPASS\tDISC_MAPQ=59;EVDNC=ASDIS;HOMSEQ=TTTTTAGTAGAGACGGGGTTCCACCATGTTGGCCAGGCTGGTCTCGAACTCCTGACCTCAGGTGATCCACCCGCCT;MAPQ=60;MATEID=517440:1;MATENM=4;NM=7;NUMPARTS=2;SCTG=c_9_128919001_128944001_27C;SPAN=1157;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:45:6:12.6:138.6,12.6,0:10:38:-138.6:138.6\n9\t129264421\t517552:1\tT\tT[9:129265791[\t22\tPASS\tEVDNC=ASSMB;HOMSEQ=GCTGGGATTACAGGT;MAPQ=60;MATEID=517552:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_129262001_129287001_128C;SPAN=1370;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:16:15.5:22.1,0,15.5:8:0:-21.93:21.93\n9\t129265791\t517552:2\tG\t]9:129264421]G\t22\tPASS\tEVDNC=ASSMB;HOMSEQ=GCTGGGATTACAGGT;MAPQ=60;MATEID=517552:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_129262001_129287001_128C;SPAN=1370;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:16:15.5:22.1,0,15.5:8:0:-21.93:21.93\n9\t129396438\t517595:1\tG\t]9:129397012]G\t69\tPASS\tDISC_MAPQ=54;EVDNC=DSCRD;IMPRECISE;MAPQ=54;MATEID=517595:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=9:129396438(-)-9:129397012(+)__9_129384501_129409501D;SPAN=574;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:25:47:46.4:69.5,0,46.4:0:25:-69.5:69.5\n9\t129397012\t517595:2\tG\tG[9:129396438[\t69\tPASS\tDISC_MAPQ=46;EVDNC=DSCRD;IMPRECISE;MAPQ=46;MATEID=517595:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=9:129396438(-)-9:129397012(+)__9_129384501_129409501D;SPAN=574;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:25:47:46.4:69.5,0,46.4:0:25:-69.5:69.5\n9\t129410470\t517627:1\tA\tA[Un_JTFH01001474v1_decoy:1[\t7\tPASS\tDISC_MAPQ=255;EVDNC=TSI_L;HOMSEQ=TCAGCATCACCACCAACATCACAACCACCATCA;MAPQ=60;MATEID=517627:2;MATENM=0;NM=0;NUMPARTS=5;REPSEQ=CACCAC;SCTG=c_9_129409001_129434001_82C;SPAN=-1;SUBN=2;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:56:7.8:7.8,0,96.2:9:0:-7.677:13.03\n9\t129435079\t517695:1\tT\tT[9:129435408[\t50\tPASS\tDISC_MAPQ=0;EVDNC=TSI_L;HOMSEQ=GGTGTCCTGT;MAPQ=60;MATEID=517695:2;MATENM=0;NM=38;NUMPARTS=3;REPSEQ=TTTTT;SCTG=c_9_129433501_129458501_42C;SPAN=329;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:21:45:50.3:50.3,0,50.3:17:8:-50.35:50.35\n9\t129435408\t517695:2\tG\t]9:129435079]G\t50\tPASS\tDISC_MAPQ=0;EVDNC=TSI_L;HOMSEQ=GGTGTCCTGT;MAPQ=60;MATEID=517695:1;MATENM=38;NM=0;NUMPARTS=3;REPSEQ=TTTTT;SCTG=c_9_129433501_129458501_42C;SPAN=329;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:21:45:50.3:50.3,0,50.3:17:8:-50.35:50.35\n9\t129864461\t518089:1\tC\tC[9:130112446[\t46\tPASS\tEVDNC=ASSMB;HOMSEQ=C;MAPQ=60;MATEID=518089:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_9_130095001_130120001_5C;SPAN=247985;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:16:13:4.2:46.2,4.2,0:16:0:-46.21:46.21\n9\t130112446\t518089:2\tC\t]9:129864461]C\t46\tPASS\tEVDNC=ASSMB;HOMSEQ=C;MAPQ=60;MATEID=518089:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_9_130095001_130120001_5C;SPAN=247985;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:16:13:4.2:46.2,4.2,0:16:0:-46.21:46.21\n9\t130197644\t518152:1\tA\t]9:130221959]A\t39\tPASS\tDISC_MAPQ=49;EVDNC=ASDIS;INSERTION=T;MAPQ=60;MATEID=518152:2;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_9_130217501_130242501_98C;SPAN=24315;SUBN=1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:13:16:0.9:39.6,0.9,0:8:10:-40.41:40.41\n9\t130221959\t518152:2\tA\tA[9:130197644[\t39\tPASS\tDISC_MAPQ=40;EVDNC=ASDIS;INSERTION=T;MAPQ=0;MATEID=518152:1;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_9_130217501_130242501_98C;SPAN=24315;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:13:16:0.9:39.6,0.9,0:8:10:-40.41:40.41\n9\t130268363\t518192:1\tC\tC[9:130272523[\t51\tPASS\tEVDNC=ASSMB;INSERTION=A;MAPQ=60;MATEID=518192:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_130266501_130291501_32C;SPAN=4160;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:18:29:21.5:51.2,0,21.5:18:0:-51.92:51.92\n9\t130272523\t518192:2\tG\t]9:130268363]G\t51\tPASS\tEVDNC=ASSMB;INSERTION=A;MAPQ=60;MATEID=518192:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_130266501_130291501_32C;SPAN=4160;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:18:29:21.5:51.2,0,21.5:18:0:-51.92:51.92\n9\t130392964\t518254:2\tC\tC]3:11599603]\t49\tPASS\tDISC_MAPQ=4;EVDNC=ASDIS;HOMSEQ=GAGTGCAGTGGCGCGATCTCGGCTCACTGCAAGCTC;MAPQ=19;MATEID=518254:1;MATENM=2;NM=4;NUMPARTS=2;SCTG=c_9_130389001_130414001_29C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:17:12:4.5:49.5,4.5,0:9:12:-49.51:49.51\n9\t131371843\t518653:1\tT\t]9:131372761]T\t0\tPASS\tEVDNC=ASSMB;HOMSEQ=TCGCCC;MAPQ=60;MATEID=518653:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_131369001_131394001_55C;SPAN=918;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:4:46:0.5:0.5,0,112.7:4:0:-0.2738:7.434\n9\t131372761\t518653:2\tC\tC[9:131371843[\t0\tPASS\tEVDNC=ASSMB;HOMSEQ=TCGCCC;MAPQ=60;MATEID=518653:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_131369001_131394001_55C;SPAN=918;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:4:46:0.5:0.5,0,112.7:4:0:-0.2738:7.434\n9\t132787337\t519162:1\tA\t]9:132845611]A\t34\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=519162:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_132839001_132864001_5C;SPAN=58274;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:20:14.3:34.1,0,14.3:12:0:-34.32:34.32\n9\t132845611\t519162:2\tT\tT[9:132787337[\t34\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=519162:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_132839001_132864001_5C;SPAN=58274;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:20:14.3:34.1,0,14.3:12:0:-34.32:34.32\n9\t133548994\t519435:1\tT\tT[9:133549304[\t59\tPASS\tEVDNC=ASSMB;HOMSEQ=CACAGTTTCCTTCTT;MAPQ=60;MATEID=519435:2;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_9_133525001_133550001_22C;SPAN=310;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:20:15:5.4:59.4,5.4,0:20:0:-59.41:59.41\n9\t133549304\t519435:2\tC\t]9:133548994]C\t59\tPASS\tEVDNC=ASSMB;HOMSEQ=CACAGTTTCCTTCTT;MAPQ=60;MATEID=519435:1;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_9_133525001_133550001_22C;SPAN=310;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:20:15:5.4:59.4,5.4,0:20:0:-59.41:59.41\n9\t134394166\t999384:1\tG\tG]Un_JTFH01000871v1_decoy:1074]\t62\tPASS\tDISC_MAPQ=255;EVDNC=TSI_G;HOMSEQ=CACCACCATCACCAACATCATCA;MAPQ=60;MATEID=999384:2;MATENM=0;NM=1;NUMPARTS=3;SCTG=c_1714_1_1074_7C;SPAN=-1;SUBN=3;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:21:7:5.7:62.7,5.7,0:21:0:-62.72:62.72\n9\t134684963\t519904:1\tC\t]9:134685497]C\t46\tPASS\tDISC_MAPQ=34;EVDNC=DSCRD;IMPRECISE;MAPQ=34;MATEID=519904:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=9:134684963(-)-9:134685497(+)__9_134676501_134701501D;SPAN=534;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:18:48:46.1:46.1,0,72.5:0:18:-45.93:46.31\n9\t134685497\t519904:2\tC\tC[9:134684963[\t46\tPASS\tDISC_MAPQ=48;EVDNC=DSCRD;IMPRECISE;MAPQ=48;MATEID=519904:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=9:134684963(-)-9:134685497(+)__9_134676501_134701501D;SPAN=534;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:18:48:46.1:46.1,0,72.5:0:18:-45.93:46.31\n9\t135119029\t520085:1\tC\t]9:135119480]C\t26\tPASS\tDISC_MAPQ=52;EVDNC=ASDIS;HOMSEQ=CTCACTGGATCTTTGGAAGTGCTCACTGGGTCTTTGGAAGTGCTCAC;MAPQ=60;MATEID=520085:2;MATENM=7;NM=1;NUMPARTS=2;SCTG=c_9_135117501_135142501_33C;SPAN=451;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:61:26:26,0,125:7:6:-25.77:29.63\n9\t135119480\t520085:2\tC\tC[9:135119029[\t26\tPASS\tDISC_MAPQ=58;EVDNC=ASDIS;HOMSEQ=CTCACTGGATCTTTGGAAGTGCTCACTGGGTCTTTGGAAGTGCTCAC;MAPQ=60;MATEID=520085:1;MATENM=1;NM=7;NUMPARTS=2;SCTG=c_9_135117501_135142501_33C;SPAN=451;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:61:26:26,0,125:7:6:-25.77:29.63\n9\t135322220\t520184:1\tA\tA[9:135325758[\t62\tPASS\tEVDNC=ASSMB;HOMSEQ=TGA;MAPQ=60;MATEID=520184:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_135313501_135338501_125C;SPAN=3538;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:22:36:26.3:62.6,0,26.3:22:0:-63.21:63.21\n9\t135325758\t520184:2\tT\t]9:135322220]T\t62\tPASS\tEVDNC=ASSMB;HOMSEQ=TGA;MAPQ=60;MATEID=520184:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_135313501_135338501_125C;SPAN=3538;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:22:36:26.3:62.6,0,26.3:22:0:-63.21:63.21\n9\t135350173\t520212:1\tC\t]Un_KN707757v1_decoy:3034]C\t17\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=520212:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_135338001_135363001_35C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:7:19:17.9:17.9,0,27.8:7:0:-17.77:17.94\n9\t135350252\t988641:1\tT\tT[Un_KN707757v1_decoy:1[\t46\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=988641:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_608_1_3034_6C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:16:4:4.2:46.2,4.2,0:16:0:-46.21:46.21\n9\t135350252\t520213:1\tT\tT[Un_KN707757v1_decoy:1[\t46\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=520213:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_135338001_135363001_41C;SPAN=-1;SUBN=1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:16:16:4.2:46.2,4.2,0:16:0:-46.21:46.21\n9\t135587257\t520316:1\tC\tC[9:135588354[\t99\tPASS\tEVDNC=ASSMB;HOMSEQ=GGC;MAPQ=60;MATEID=520316:2;MATENM=1;NM=5;NUMPARTS=2;SCTG=c_9_135583001_135608001_28C;SPAN=1097;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:36:18:9.9:108.9,9.9,0:36:0:-108.9:108.9\n9\t135588354\t520316:2\tG\t]9:135587257]G\t99\tPASS\tEVDNC=ASSMB;HOMSEQ=GGC;MAPQ=60;MATEID=520316:1;MATENM=5;NM=1;NUMPARTS=2;SCTG=c_9_135583001_135608001_28C;SPAN=1097;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:36:18:9.9:108.9,9.9,0:36:0:-108.9:108.9\n9\t136772879\t520714:1\tA\tA[9:136782783[\t38\tPASS\tEVDNC=ASSMB;HOMSEQ=AA;MAPQ=60;MATEID=520714:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_9_136759001_136784001_89C;SPAN=9904;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:27:28.7:38.6,0,28.7:14:0:-38.69:38.69\n9\t136782783\t520714:2\tA\t]9:136772879]A\t38\tPASS\tEVDNC=ASSMB;HOMSEQ=AA;MAPQ=60;MATEID=520714:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_9_136759001_136784001_89C;SPAN=9904;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:27:28.7:38.6,0,28.7:14:0:-38.69:38.69\n9\t137359057\t521016:1\tC\tC[9:137361528[\t82\tPASS\tDISC_MAPQ=60;EVDNC=TSI_G;HOMSEQ=TCGATCTCCTGACCTCGT;INSERTION=GATCCGTCCGCCTCGGCCTT;MAPQ=60;MATEID=521016:2;MATENM=1;NM=0;NUMPARTS=3;SCTG=c_9_137347001_137372001_0C;SPAN=2471;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:27:5:7.5:82.5,7.5,0:23:8:-82.52:82.52\n9\t137361528\t521016:2\tA\t]9:137359057]A\t82\tPASS\tDISC_MAPQ=46;EVDNC=TSI_G;HOMSEQ=TCGATCTCCTGACCTCGT;INSERTION=GATCCGTCCGCCTCGGCCTT;MAPQ=60;MATEID=521016:1;MATENM=0;NM=1;NUMPARTS=3;SCTG=c_9_137347001_137372001_0C;SPAN=2471;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:27:5:7.5:82.5,7.5,0:23:8:-82.52:82.52\n9\t137506126\t521125:1\tC\t]9:137559807]C\t99\tPASS\tDISC_MAPQ=51;EVDNC=ASDIS;HOMSEQ=C;MAPQ=60;MATEID=521125:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_137543001_137568001_26C;SPAN=53681;SUBN=1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:37:23:10.2:112.2,10.2,0:24:26:-112.2:112.2\n9\t137529033\t521126:1\tT\tT[9:137547812[\t19\tPASS\tEVDNC=ASSMB;HOMSEQ=CTCT;MAPQ=60;MATEID=521126:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_137543001_137568001_36C;SPAN=18779;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:36:19.7:19.7,0,69.2:9:0:-19.59:21.23\n9\t137546395\t521158:1\tC\t]9:137681397]C\t34\tPASS\tDISC_MAPQ=55;EVDNC=ASDIS;MAPQ=60;MATEID=521158:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_137665501_137690501_62C;SPAN=135002;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:32:34.1:34.1,0,44:9:9:-33.92:34.03\n9\t137547812\t521126:2\tC\t]9:137529033]C\t19\tPASS\tEVDNC=ASSMB;HOMSEQ=CTCT;MAPQ=60;MATEID=521126:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_137543001_137568001_36C;SPAN=18779;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:36:19.7:19.7,0,69.2:9:0:-19.59:21.23\n9\t137559807\t521125:2\tC\tC[9:137506126[\t99\tPASS\tDISC_MAPQ=43;EVDNC=ASDIS;HOMSEQ=C;MAPQ=60;MATEID=521125:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_137543001_137568001_26C;SPAN=53681;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:37:23:10.2:112.2,10.2,0:24:26:-112.2:112.2\n9\t137681397\t521158:2\tT\tT[9:137546395[\t34\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;MAPQ=60;MATEID=521158:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_137665501_137690501_62C;SPAN=135002;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:32:34.1:34.1,0,44:9:9:-33.92:34.03\n9\t137888932\t521254:1\tG\tG[9:137890829[\t57\tPASS\tDISC_MAPQ=7;EVDNC=ASDIS;HOMSEQ=CC;MAPQ=19;MATEID=521254:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_137886001_137911001_34C;SPAN=1897;SUBN=1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:20:31:17.9:57.5,0,17.9:12:10:-58.24:58.24\n9\t137890829\t521254:2\tG\t]9:137888932]G\t57\tPASS\tDISC_MAPQ=28;EVDNC=ASDIS;HOMSEQ=CC;MAPQ=60;MATEID=521254:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_9_137886001_137911001_34C;SPAN=1897;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:20:31:17.9:57.5,0,17.9:12:10:-58.24:58.24\n9\t138145282\t521500:1\tG\t[10:79032[G\t18\tPASS\tDISC_MAPQ=16;EVDNC=DSCRD;IMPRECISE;MAPQ=16;MATEID=521500:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=9:138145282(-)-10:79032(-)__10_73501_98501D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:28:18.5:18.5,0,51.5:0:8:-18.54:19.42\n10\t79032\t521500:2\tT\t[9:138145282[T\t18\tPASS\tDISC_MAPQ=44;EVDNC=DSCRD;IMPRECISE;MAPQ=44;MATEID=521500:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=9:138145282(-)-10:79032(-)__10_73501_98501D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:28:18.5:18.5,0,51.5:0:8:-18.54:19.42\n10\t337269\t521638:1\tT\t]10:337797]T\t35\tPASS\tDISC_MAPQ=33;EVDNC=ASDIS;HOMSEQ=TGTGTGTGTG;MAPQ=60;MATEID=521638:2;MATENM=3;NM=0;NUMPARTS=2;SCTG=c_10_318501_343501_61C;SPAN=528;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:15:52:35:35,0,94.4:13:2:-34.9:36.48\n10\t337797\t521638:2\tG\tG[10:337269[\t35\tPASS\tDISC_MAPQ=43;EVDNC=ASDIS;HOMSEQ=TGTGTGTGTG;MAPQ=33;MATEID=521638:1;MATENM=0;NM=3;NUMPARTS=2;SCTG=c_10_318501_343501_61C;SPAN=528;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:15:52:35:35,0,94.4:13:2:-34.9:36.48\n10\t367969\t521652:1\tC\tC[10:368184[\t56\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=CACAGCCCCAGGTGCCTCCGACGGGGGCCCGGGAAGCCCGCGGTTGCTCTCACTGCTGCACAGCCCCAGGTGCCTC;MAPQ=60;MATEID=521652:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_10_367501_392501_24C;SPAN=215;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:19:19:5.1:56.1,5.1,0:12:8:-56.11:56.11\n10\t368184\t521652:2\tC\t]10:367969]C\t56\tPASS\tDISC_MAPQ=58;EVDNC=ASDIS;HOMSEQ=CACAGCCCCAGGTGCCTCCGACGGGGGCCCGGGAAGCCCGCGGTTGCTCTCACTGCTGCACAGCCCCAGGTGCCTC;MAPQ=60;MATEID=521652:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_10_367501_392501_24C;SPAN=215;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:19:19:5.1:56.1,5.1,0:12:8:-56.11:56.11\n10\t417653\t521681:1\tC\tC[10:418146[\t99\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;INSERTION=GCCTGTGCCTGTCGGCTCAAATAGGCCTCCCTGTCTGCCTGCG;MAPQ=16;MATEID=521681:2;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_10_416501_441501_19C;SPAN=493;SUBN=2;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:51:33:14.1:155.1,14.1,0:49:7:-155.1:155.1\n10\t418146\t521681:2\tC\t]10:417653]C\t99\tPASS\tDISC_MAPQ=36;EVDNC=ASDIS;INSERTION=GCCTGTGCCTGTCGGCTCAAATAGGCCTCCCTGTCTGCCTGCG;MAPQ=60;MATEID=521681:1;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_10_416501_441501_19C;SPAN=493;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:51:33:14.1:155.1,14.1,0:49:7:-155.1:155.1\n10\t846157\t521947:1\tA\t]10:1048151]A\t31\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;MAPQ=60;MATEID=521947:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_10_1029001_1054001_64C;SPAN=201994;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:28:31.7:31.7,0,38.3:9:10:-31.74:31.78\n10\t1048151\t521947:2\tG\tG[10:846157[\t31\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;MAPQ=60;MATEID=521947:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_10_1029001_1054001_64C;SPAN=201994;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:28:31.7:31.7,0,38.3:9:10:-31.74:31.78\n10\t1174091\t522022:1\tT\t]10:1174299]T\t8\tPASS\tEVDNC=ASSMB;HOMSEQ=TCAGGACAGAGATGGGTGTATGTGGTCTA;MAPQ=60;MATEID=522022:2;MATENM=4;NM=0;NUMPARTS=2;SCTG=c_10_1151501_1176501_99C;SPAN=208;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:75:8.6:8.6,0,180.2:9:0:-8.627:18.06\n10\t1174299\t522022:2\tA\tA[10:1174091[\t8\tPASS\tEVDNC=ASSMB;HOMSEQ=TCAGGACAGAGATGGGTGTATGTGGTCTA;MAPQ=60;MATEID=522022:1;MATENM=0;NM=4;NUMPARTS=2;SCTG=c_10_1151501_1176501_99C;SPAN=208;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:75:8.6:8.6,0,180.2:9:0:-8.627:18.06\n10\t2256296\t522628:1\tG\tG[10:2257474[\t50\tPASS\tEVDNC=ASSMB;INSERTION=TT;MAPQ=60;MATEID=522628:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_10_2254001_2279001_146C;SPAN=1178;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:19:43:50.6:50.6,0,57.2:19:0:-50.63:50.66\n10\t2257474\t522628:2\tA\t]10:2256296]A\t50\tPASS\tEVDNC=ASSMB;INSERTION=TT;MAPQ=60;MATEID=522628:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_10_2254001_2279001_146C;SPAN=1178;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:19:43:50.6:50.6,0,57.2:19:0:-50.63:50.66\n10\t3040693\t730799:1\tG\tG]15:53117362]\t42\tPASS\tDISC_MAPQ=17;EVDNC=DSCRD;IMPRECISE;MAPQ=17;MATEID=730799:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=10:3040693(+)-15:53117362(+)__15_53116001_53141001D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:14:2:3.9:42.9,3.9,0:0:14:-42.91:42.91\n10\t3242279\t523212:1\tT\t]10:3242421]T\t85\tPASS\tEVDNC=ASSMB;HOMSEQ=TGTGTGTGT;MAPQ=60;MATEID=523212:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_10_3234001_3259001_109C;SPAN=142;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:32:72:85.4:85.4,0,95.3:32:0:-85.39:85.43\n10\t3242421\t523212:2\tT\tT[10:3242279[\t85\tPASS\tEVDNC=ASSMB;HOMSEQ=TGTGTGTGT;MAPQ=60;MATEID=523212:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_10_3234001_3259001_109C;SPAN=142;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:32:72:85.4:85.4,0,95.3:32:0:-85.39:85.43\n10\t4247987\t523750:1\tT\tT[10:4249489[\t99\tPASS\tDISC_MAPQ=59;EVDNC=DSCRD;IMPRECISE;MAPQ=59;MATEID=523750:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=10:4247987(+)-10:4249489(-)__10_4238501_4263501D;SPAN=1502;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:53:13:14.7:161.7,14.7,0:0:53:-161.7:161.7\n10\t4249489\t523750:2\tC\t]10:4247987]C\t99\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=523750:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=10:4247987(+)-10:4249489(-)__10_4238501_4263501D;SPAN=1502;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:53:13:14.7:161.7,14.7,0:0:53:-161.7:161.7\n10\t4592619\t523879:1\tA\tA[10:4592929[\t99\tPASS\tEVDNC=ASSMB;HOMSEQ=AAGAAAAAGA;MAPQ=60;MATEID=523879:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_4581501_4606501_146C;SPAN=310;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:54:43:15:165,15,0:54:0:-165:165\n10\t4592929\t523879:2\tA\t]10:4592619]A\t99\tPASS\tEVDNC=ASSMB;HOMSEQ=AAGAAAAAGA;MAPQ=60;MATEID=523879:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_4581501_4606501_146C;SPAN=310;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:54:43:15:165,15,0:54:0:-165:165\n10\t4666326\t523910:1\tT\tT[10:4668331[\t99\tPASS\tEVDNC=ASSMB;INSERTION=ATAG;MAPQ=60;MATEID=523910:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_10_4655001_4680001_55C;SPAN=2005;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:38:20:10.5:115.5,10.5,0:38:0:-115.5:115.5\n10\t4668331\t523910:2\tT\t]10:4666326]T\t99\tPASS\tEVDNC=ASSMB;INSERTION=ATAG;MAPQ=60;MATEID=523910:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_10_4655001_4680001_55C;SPAN=2005;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:38:20:10.5:115.5,10.5,0:38:0:-115.5:115.5\n10\t5169108\t524180:1\tC\t[Un_JTFH01001594v1_decoy:1[C\t36\tPASS\tDISC_MAPQ=255;EVDNC=TSI_L;HOMSEQ=AAAGACAGCTCAGGCACAGGGGGAGGTGCGG;MAPQ=52;MATEID=524180:2;MATENM=0;NM=0;NUMPARTS=3;REPSEQ=GG;SCTG=c_10_5169501_5194501_110C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:12:0:3.3:36.3,3.3,0:12:0:-36.31:36.31\n10\t5245354\t524219:1\tT\tT[10:5251383[\t99\tPASS\tEVDNC=ASSMB;HOMSEQ=AAAAAAATAGTGTAAAGT;MAPQ=60;MATEID=524219:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_5243001_5268001_23C;SPAN=6029;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:35:40:4.5:108.9,4.5,0:35:0:-111.7:111.7\n10\t5251383\t524219:2\tA\t]10:5245354]A\t99\tPASS\tEVDNC=ASSMB;HOMSEQ=AAAAAAATAGTGTAAAGT;MAPQ=60;MATEID=524219:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_5243001_5268001_23C;SPAN=6029;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:35:40:4.5:108.9,4.5,0:35:0:-111.7:111.7\n10\t6210012\t524800:1\tA\tA[10:6210952[\t65\tPASS\tEVDNC=ASSMB;HOMSEQ=CCCGCCTCGGCCTCCCA;MAPQ=60;MATEID=524800:2;MATENM=2;NM=2;NUMPARTS=2;SCTG=c_10_6198501_6223501_10C;SPAN=940;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:23:36:23:65.9,0,23:23:0:-66.82:66.82\n10\t6210952\t524800:2\tC\t]10:6210012]C\t65\tPASS\tEVDNC=ASSMB;HOMSEQ=CCCGCCTCGGCCTCCCA;MAPQ=60;MATEID=524800:1;MATENM=2;NM=2;NUMPARTS=2;SCTG=c_10_6198501_6223501_10C;SPAN=940;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:23:36:23:65.9,0,23:23:0:-66.82:66.82\n10\t6369618\t524908:1\tT\tT[10:6375668[\t95\tPASS\tEVDNC=ASSMB;HOMSEQ=CAGCAAATCATTTTCCT;MAPQ=60;MATEID=524908:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_6345501_6370501_53C;SPAN=6050;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:29:32:8.7:95.7,8.7,0:29:0:-94:94\n10\t6375668\t524908:2\tC\t]10:6369618]C\t95\tPASS\tEVDNC=ASSMB;HOMSEQ=CAGCAAATCATTTTCCT;MAPQ=60;MATEID=524908:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_6345501_6370501_53C;SPAN=6050;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:29:32:8.7:95.7,8.7,0:29:0:-94:94\n10\t6894560\t525248:1\tA\t]10:6894663]A\t99\tPASS\tEVDNC=ASSMB;INSERTION=GCATGGTATGGAGTAGCAGTTTCCAGCATACTGCATGGTATGGAGTAGCAGTTTCA;MAPQ=60;MATEID=525248:2;MATENM=2;NM=2;NUMPARTS=2;SCTG=c_10_6884501_6909501_96C;SPAN=103;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:52:169:99:124.4,0,299.3:52:0:-124.1:128.2\n10\t6894663\t525248:2\tT\tT[10:6894560[\t99\tPASS\tEVDNC=ASSMB;INSERTION=GCATGGTATGGAGTAGCAGTTTCCAGCATACTGCATGGTATGGAGTAGCAGTTTCA;MAPQ=60;MATEID=525248:1;MATENM=2;NM=2;NUMPARTS=2;SCTG=c_10_6884501_6909501_96C;SPAN=103;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:52:169:99:124.4,0,299.3:52:0:-124.1:128.2\n10\t7035078\t525336:1\tT\tT[10:7036340[\t99\tPASS\tEVDNC=ASSMB;INSERTION=A;MAPQ=60;MATEID=525336:2;MATENM=2;NM=1;NUMPARTS=2;SCTG=c_10_7031501_7056501_19C;SPAN=1262;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:49:26:13.5:148.5,13.5,0:49:0:-148.5:148.5\n10\t7036340\t525336:2\tC\t]10:7035078]C\t99\tPASS\tEVDNC=ASSMB;INSERTION=A;MAPQ=60;MATEID=525336:1;MATENM=1;NM=2;NUMPARTS=2;SCTG=c_10_7031501_7056501_19C;SPAN=1262;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:49:26:13.5:148.5,13.5,0:49:0:-148.5:148.5\n10\t7526497\t525537:1\tT\t]10:7527082]T\t46\tPASS\tDISC_MAPQ=24;EVDNC=DSCRD;IMPRECISE;MAPQ=24;MATEID=525537:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=10:7526497(-)-10:7527082(+)__10_7521501_7546501D;SPAN=585;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:18:47:46.4:46.4,0,69.5:0:18:-46.21:46.52\n10\t7527082\t525537:2\tC\tC[10:7526497[\t46\tPASS\tDISC_MAPQ=18;EVDNC=DSCRD;IMPRECISE;MAPQ=18;MATEID=525537:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=10:7526497(-)-10:7527082(+)__10_7521501_7546501D;SPAN=585;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:18:47:46.4:46.4,0,69.5:0:18:-46.21:46.52\n10\t7751867\t525705:1\tG\tG[10:7752076[\t74\tPASS\tEVDNC=ASSMB;HOMSEQ=AAAAGTAACGATG;MAPQ=60;MATEID=525705:2;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_10_7742001_7767001_8C;SPAN=209;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:25:31:1.4:74,0,1.4:25:0:-77.51:77.51\n10\t7752076\t525705:2\tA\t]10:7751867]A\t74\tPASS\tEVDNC=ASSMB;HOMSEQ=AAAAGTAACGATG;MAPQ=60;MATEID=525705:1;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_10_7742001_7767001_8C;SPAN=209;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:25:31:1.4:74,0,1.4:25:0:-77.51:77.51\n10\t7819172\t525836:1\tT\t[10:7999791[T\t53\tPASS\tDISC_MAPQ=255;EVDNC=ASDIS;INSERTION=CAATGCAGGGGCTCAGGCTGGTCAACAGAGCT;MAPQ=60;MATEID=525836:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_7987001_8012001_49C;SPAN=180619;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:19:32:24.2:53.9,0,24.2:11:15:-54.21:54.21\n10\t7953950\t525815:1\tT\tT[10:7954929[\t99\tPASS\tDISC_MAPQ=58;EVDNC=DSCRD;IMPRECISE;MAPQ=58;MATEID=525815:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=10:7953950(+)-10:7954929(-)__10_7938001_7963001D;SPAN=979;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:35:25:9.6:105.6,9.6,0:0:35:-105.6:105.6\n10\t7954929\t525815:2\tA\t]10:7953950]A\t99\tPASS\tDISC_MAPQ=58;EVDNC=DSCRD;IMPRECISE;MAPQ=58;MATEID=525815:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=10:7953950(+)-10:7954929(-)__10_7938001_7963001D;SPAN=979;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:35:25:9.6:105.6,9.6,0:0:35:-105.6:105.6\n10\t7998109\t525843:1\tT\tT]10:8023057]\t23\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=525843:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=10:7998109(+)-10:8023057(+)__10_7987001_8012001D;SPAN=24948;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:23:23.3:23.3,0,33.2:0:9:-23.24:23.37\n10\t7999791\t525836:2\tT\t[10:7819172[T\t53\tPASS\tDISC_MAPQ=56;EVDNC=ASDIS;INSERTION=CAATGCAGGGGCTCAGGCTGGTCAACAGAGCT;MAPQ=60;MATEID=525836:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_7987001_8012001_49C;SPAN=180619;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:19:32:24.2:53.9,0,24.2:11:15:-54.21:54.21\n10\t8023057\t525843:2\tT\tT]10:7998109]\t23\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=525843:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=10:7998109(+)-10:8023057(+)__10_7987001_8012001D;SPAN=24948;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:23:23.3:23.3,0,33.2:0:9:-23.24:23.37\n10\t8436075\t526239:1\tA\t]10:8535177]A\t28\tPASS\tEVDNC=ASSMB;INSERTION=TAC;MAPQ=60;MATEID=526239:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_10_8526001_8551001_176C;SPAN=99102;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:28:28.4:28.4,0,41.6:11:0:-28.44:28.58\n10\t8535177\t526239:2\tA\tA[10:8436075[\t28\tPASS\tEVDNC=ASSMB;INSERTION=TAC;MAPQ=60;MATEID=526239:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_10_8526001_8551001_176C;SPAN=99102;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:28:28.4:28.4,0,41.6:11:0:-28.44:28.58\n10\t8740029\t526412:1\tT\tT[10:8740345[\t99\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=GCTTAGTTTTCTTT;MAPQ=60;MATEID=526412:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_8722001_8747001_74C;SPAN=316;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:37:33:10.2:112.2,10.2,0:26:12:-112.2:112.2\n10\t8740345\t526412:2\tG\t]10:8740029]G\t99\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=GCTTAGTTTTCTTT;MAPQ=60;MATEID=526412:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_8722001_8747001_74C;SPAN=316;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:37:33:10.2:112.2,10.2,0:26:12:-112.2:112.2\n10\t9081206\t526682:1\tA\t]10:9240096]A\t11\tPASS\tEVDNC=ASSMB;HOMSEQ=ATGA;MAPQ=60;MATEID=526682:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_9065001_9090001_1C;SPAN=158890;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:7:43:11:11,0,96.8:7:0:-11.02:15.04\n10\t9240096\t526682:2\tA\tA[10:9081206[\t11\tPASS\tEVDNC=ASSMB;HOMSEQ=ATGA;MAPQ=60;MATEID=526682:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_9065001_9090001_1C;SPAN=158890;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:7:43:11:11,0,96.8:7:0:-11.02:15.04\n10\t11283839\t527473:1\tA\t]10:11284626]A\t32\tPASS\tDISC_MAPQ=15;EVDNC=DSCRD;IMPRECISE;MAPQ=15;MATEID=527473:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=10:11283839(-)-10:11284626(+)__10_11270001_11295001D;SPAN=787;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:50:32.3:32.3,0,91.7:0:14:-32.16:33.83\n10\t11284626\t527473:2\tA\tA[10:11283839[\t32\tPASS\tDISC_MAPQ=17;EVDNC=DSCRD;IMPRECISE;MAPQ=17;MATEID=527473:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=10:11283839(-)-10:11284626(+)__10_11270001_11295001D;SPAN=787;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:50:32.3:32.3,0,91.7:0:14:-32.16:33.83\n10\t11903434\t527787:1\tC\tC[10:11903772[\t92\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=GC;MAPQ=60;MATEID=527787:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_11882501_11907501_27C;SPAN=338;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:30:27:8.4:92.4,8.4,0:24:9:-92.42:92.42\n10\t11903772\t527787:2\tG\t]10:11903434]G\t92\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=GC;MAPQ=60;MATEID=527787:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_11882501_11907501_27C;SPAN=338;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:30:27:8.4:92.4,8.4,0:24:9:-92.42:92.42\n10\t12518474\t528136:1\tT\tT[10:12520975[\t56\tPASS\tEVDNC=ASSMB;HOMSEQ=CTTTATTCATTCTT;MAPQ=60;MATEID=528136:2;MATENM=3;NM=2;NUMPARTS=2;SCTG=c_10_12519501_12544501_2C;SPAN=2501;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:19:5:5.1:56.1,5.1,0:19:0:-56.11:56.11\n10\t12520975\t528136:2\tC\t]10:12518474]C\t56\tPASS\tEVDNC=ASSMB;HOMSEQ=CTTTATTCATTCTT;MAPQ=60;MATEID=528136:1;MATENM=2;NM=3;NUMPARTS=2;SCTG=c_10_12519501_12544501_2C;SPAN=2501;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:19:5:5.1:56.1,5.1,0:19:0:-56.11:56.11\n10\t13490359\t528682:1\tT\t]10:13613251]T\t52\tPASS\tEVDNC=ASSMB;HOMSEQ=TG;MAPQ=60;MATEID=528682:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_13597501_13622501_37C;SPAN=122892;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:18:26:12.5:52.1,0,12.5:18:0:-53.39:53.39\n10\t13613251\t528682:2\tG\tG[10:13490359[\t52\tPASS\tEVDNC=ASSMB;HOMSEQ=TG;MAPQ=60;MATEID=528682:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_13597501_13622501_37C;SPAN=122892;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:18:26:12.5:52.1,0,12.5:18:0:-53.39:53.39\n10\t15915313\t96983:2\tA\t]2:90371363]A\t92\tPASS\tDISC_MAPQ=58;EVDNC=ASDIS;INSERTION=TTTTTTTTTA;MAPQ=60;MATEID=96983:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_2_90356001_90381001_107C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:35:81:92.9:92.9,0,109.4:27:14:-92.77:92.86\n10\t18214147\t530576:1\tA\tA[10:18214661[\t40\tPASS\tEVDNC=ASSMB;HOMSEQ=A;MAPQ=60;MATEID=530576:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_18203501_18228501_20C;SPAN=514;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:22:13.7:40.1,0,13.7:14:0:-40.63:40.63\n10\t18214661\t530576:2\tA\t]10:18214147]A\t40\tPASS\tEVDNC=ASSMB;HOMSEQ=A;MAPQ=60;MATEID=530576:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_18203501_18228501_20C;SPAN=514;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:22:13.7:40.1,0,13.7:14:0:-40.63:40.63\n10\t19116995\t530955:1\tT\t]10:19211610]T\t39\tPASS\tDISC_MAPQ=55;EVDNC=ASDIS;HOMSEQ=TGAGGCAGGATAATCGCTTGAACC;MAPQ=60;MATEID=530955:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_10_19208001_19233001_99C;SPAN=94615;SUBN=1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:12:13:3.6:39.6,3.6,0:9:3:-39.28:39.28\n10\t19211610\t530955:2\tC\tC[10:19116995[\t39\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TGAGGCAGGATAATCGCTTGAACC;MAPQ=60;MATEID=530955:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_10_19208001_19233001_99C;SPAN=94615;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:12:13:3.6:39.6,3.6,0:9:3:-39.28:39.28\n10\t19321258\t531031:1\tT\tT[10:19362086[\t20\tPASS\tEVDNC=ASSMB;INSERTION=AA;MAPQ=60;MATEID=531031:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_10_19355001_19380001_8C;SPAN=40828;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:20:20.9:20.9,0,27.5:8:0:-20.79:20.87\n10\t19362086\t531031:2\tA\t]10:19321258]A\t20\tPASS\tEVDNC=ASSMB;INSERTION=AA;MAPQ=60;MATEID=531031:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_10_19355001_19380001_8C;SPAN=40828;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:20:20.9:20.9,0,27.5:8:0:-20.79:20.87\n10\t19707705\t531188:1\tT\tT[10:19709146[\t30\tPASS\tDISC_MAPQ=56;EVDNC=DSCRD;IMPRECISE;MAPQ=56;MATEID=531188:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=10:19707705(+)-10:19709146(-)__10_19698001_19723001D;SPAN=1441;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:21:20.6:30.5,0,20.6:0:11:-30.47:30.47\n10\t19709146\t531188:2\tC\t]10:19707705]C\t30\tPASS\tDISC_MAPQ=46;EVDNC=DSCRD;IMPRECISE;MAPQ=46;MATEID=531188:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=10:19707705(+)-10:19709146(-)__10_19698001_19723001D;SPAN=1441;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:21:20.6:30.5,0,20.6:0:11:-30.47:30.47\n10\t20378330\t531455:1\tG\tG[10:20378637[\t72\tPASS\tEVDNC=ASSMB;HOMSEQ=AAAAGATTAGTAAG;MAPQ=60;MATEID=531455:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_20359501_20384501_59C;SPAN=307;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:23:24:6.6:72.6,6.6,0:23:0:-72.62:72.62\n10\t20378637\t531455:2\tA\t]10:20378330]A\t72\tPASS\tEVDNC=ASSMB;HOMSEQ=AAAAGATTAGTAAG;MAPQ=60;MATEID=531455:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_20359501_20384501_59C;SPAN=307;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:23:24:6.6:72.6,6.6,0:23:0:-72.62:72.62\n10\t21689372\t531851:1\tT\t]10:21772706]T\t28\tPASS\tEVDNC=ASSMB;HOMSEQ=TTTC;MAPQ=60;MATEID=531851:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_21756001_21781001_41C;SPAN=83334;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:18:14.9:28.1,0,14.9:10:0:-28.08:28.08\n10\t21717820\t52839:2\tC\t[1:197544937[C\t49\tPASS\tDISC_MAPQ=0;EVDNC=TSI_L;INSERTION=CCCTTCTCC;MAPQ=53;MATEID=52839:1;MATENM=14;NM=0;NUMPARTS=3;REPSEQ=CC;SCTG=c_1_197543501_197568501_0C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:17:8:4.5:49.5,4.5,0:15:9:-49.51:49.51\n10\t21772706\t531851:2\tC\tC[10:21689372[\t28\tPASS\tEVDNC=ASSMB;HOMSEQ=TTTC;MAPQ=60;MATEID=531851:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_21756001_21781001_41C;SPAN=83334;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:18:14.9:28.1,0,14.9:10:0:-28.08:28.08\n10\t25203596\t532849:1\tC\tC[10:25204023[\t89\tPASS\tDISC_MAPQ=46;EVDNC=ASDIS;INSERTION=A;MAPQ=43;MATEID=532849:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_25186001_25211001_27C;SPAN=427;SUBN=1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:29:29:8.1:89.1,8.1,0:22:12:-89.12:89.12\n10\t25204023\t532849:2\tT\t]10:25203596]T\t89\tPASS\tDISC_MAPQ=40;EVDNC=ASDIS;INSERTION=A;MAPQ=60;MATEID=532849:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_25186001_25211001_27C;SPAN=427;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:29:29:8.1:89.1,8.1,0:22:12:-89.12:89.12\n10\t26065838\t533215:1\tC\tC[10:26066145[\t21\tPASS\tEVDNC=ASSMB;HOMSEQ=GAGCAGTGGGC;MAPQ=60;MATEID=533215:2;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_10_26043501_26068501_3C;SPAN=307;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:17:18.5:21.8,0,18.5:8:0:-21.63:21.63\n10\t26066145\t533215:2\tG\t]10:26065838]G\t21\tPASS\tEVDNC=ASSMB;HOMSEQ=GAGCAGTGGGC;MAPQ=60;MATEID=533215:1;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_10_26043501_26068501_3C;SPAN=307;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:17:18.5:21.8,0,18.5:8:0:-21.63:21.63\n10\t26710119\t533592:1\tA\tA[10:26713225[\t92\tPASS\tDISC_MAPQ=58;EVDNC=ASDIS;HOMSEQ=GAGGTTGCAGTGAGCCGAGATCACGCCATTGCA;MAPQ=60;MATEID=533592:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_10_26705001_26730001_95C;SPAN=3106;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:31:21:8.4:92.4,8.4,0:20:17:-92.42:92.42\n10\t26713225\t533592:2\tG\t]10:26710119]G\t92\tPASS\tDISC_MAPQ=54;EVDNC=ASDIS;HOMSEQ=GAGGTTGCAGTGAGCCGAGATCACGCCATTGCA;MAPQ=60;MATEID=533592:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_10_26705001_26730001_95C;SPAN=3106;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:31:21:8.4:92.4,8.4,0:20:17:-92.42:92.42\n10\t26935274\t533742:1\tA\tA[10:26939157[\t32\tPASS\tEVDNC=ASSMB;HOMSEQ=ACA;MAPQ=60;MATEID=533742:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_26925501_26950501_46C;SPAN=3883;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:51:32:32,0,94.7:14:0:-31.88:33.69\n10\t26935698\t533746:1\tT\t]10:26940472]T\t20\tPASS\tDISC_MAPQ=52;EVDNC=DSCRD;IMPRECISE;MAPQ=52;MATEID=533746:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=10:26935698(-)-10:26940472(+)__10_26925501_26950501D;SPAN=4774;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:45:20.3:20.3,0,92.9:0:10:-20.36:23\n10\t26939157\t533742:2\tA\t]10:26935274]A\t32\tPASS\tEVDNC=ASSMB;HOMSEQ=ACA;MAPQ=60;MATEID=533742:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_26925501_26950501_46C;SPAN=3883;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:51:32:32,0,94.7:14:0:-31.88:33.69\n10\t26940472\t533746:2\tT\tT[10:26935698[\t20\tPASS\tDISC_MAPQ=42;EVDNC=DSCRD;IMPRECISE;MAPQ=42;MATEID=533746:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=10:26935698(-)-10:26940472(+)__10_26925501_26950501D;SPAN=4774;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:45:20.3:20.3,0,92.9:0:10:-20.36:23\n10\t30957818\t535680:1\tA\tA[10:30962841[\t64\tPASS\tEVDNC=ASSMB;INSERTION=TGTTCAA;MAPQ=60;MATEID=535680:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_30943501_30968501_17C;SPAN=5023;SUBN=1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:22:31:11.3:64.1,0,11.3:22:0:-65.69:65.69\n10\t30962841\t535680:2\tC\t]10:30957818]C\t64\tPASS\tEVDNC=ASSMB;INSERTION=TGTTCAA;MAPQ=60;MATEID=535680:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_30943501_30968501_17C;SPAN=5023;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:22:31:11.3:64.1,0,11.3:22:0:-65.69:65.69\n10\t31154439\t535744:1\tG\tG[10:31155936[\t44\tPASS\tEVDNC=ASSMB;HOMSEQ=TTGGGAGGCTGAGGCAGG;MAPQ=60;MATEID=535744:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_31139501_31164501_12C;SPAN=1497;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:16:28:25.1:44.9,0,25.1:16:0:-45.23:45.23\n10\t31155936\t535744:2\tT\t]10:31154439]T\t44\tPASS\tEVDNC=ASSMB;HOMSEQ=TTGGGAGGCTGAGGCAGG;MAPQ=60;MATEID=535744:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_31139501_31164501_12C;SPAN=1497;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:16:28:25.1:44.9,0,25.1:16:0:-45.23:45.23\n10\t31687153\t535880:1\tT\t]10:31687467]T\t14\tPASS\tDISC_MAPQ=4;EVDNC=TSI_L;HOMSEQ=TATATACATTATTTATATATAAATATATATTTTTATATACATTATTTATATATAAATATATATTTTTATATACATTATTTATATATAAATATGTATTTTTATATACATTATTTATATATAAATATGTATTTTTATATACATTATTTATATATAAATATGTATTTATATATACATTATTTATATATAAATATGTATTTATATATACATTATTTATATATAAATATGTATTTATATATACATTATTTATATATAAATGTATATATTTATATATACATTATTTATATATAAATATATATTTATATATACATTATATATAAATATATATTTATATATA;INSERTION=ATT;MAPQ=60;MATEID=535880:2;MATENM=29;NM=0;NUMPARTS=5;REPSEQ=ATATAT;SCTG=c_10_31678501_31703501_4C;SPAN=314;SUBN=2;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:23:14.5:14.5,0,27.5:7:2:-14.35:14.66\n10\t31687467\t535880:2\tT\tT[10:31687153[\t14\tPASS\tDISC_MAPQ=15;EVDNC=TSI_L;HOMSEQ=TATATACATTATTTATATATAAATATATATTTTTATATACATTATTTATATATAAATATATATTTTTATATACATTATTTATATATAAATATGTATTTTTATATACATTATTTATATATAAATATGTATTTTTATATACATTATTTATATATAAATATGTATTTATATATACATTATTTATATATAAATATGTATTTATATATACATTATTTATATATAAATATGTATTTATATATACATTATTTATATATAAATGTATATATTTATATATACATTATTTATATATAAATATATATTTATATATACATTATATATAAATATATATTTATATATA;INSERTION=ATT;MAPQ=24;MATEID=535880:1;MATENM=0;NM=29;NUMPARTS=5;REPSEQ=ATATAT;SCTG=c_10_31678501_31703501_4C;SPAN=314;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:23:14.5:14.5,0,27.5:7:2:-14.35:14.66\n10\t31968967\t535994:1\tG\tG[10:31971685[\t54\tPASS\tEVDNC=ASSMB;HOMSEQ=AAAAGATATTAGTTG;MAPQ=60;MATEID=535994:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_31948001_31973001_30C;SPAN=2718;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:19:31:21.2:54.2,0,21.2:19:0:-54.63:54.63\n10\t31971685\t535994:2\tA\t]10:31968967]A\t54\tPASS\tEVDNC=ASSMB;HOMSEQ=AAAAGATATTAGTTG;MAPQ=60;MATEID=535994:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_31948001_31973001_30C;SPAN=2718;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:19:31:21.2:54.2,0,21.2:19:0:-54.63:54.63\n10\t32416809\t536235:1\tC\tC[10:32417137[\t99\tPASS\tEVDNC=ASSMB;HOMSEQ=ATATTCTATTC;MAPQ=60;MATEID=536235:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_32413501_32438501_52C;SPAN=328;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:46:25:12.6:138.6,12.6,0:46:0:-138.6:138.6\n10\t32417137\t536235:2\tA\t]10:32416809]A\t99\tPASS\tEVDNC=ASSMB;HOMSEQ=ATATTCTATTC;MAPQ=60;MATEID=536235:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_32413501_32438501_52C;SPAN=328;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:46:25:12.6:138.6,12.6,0:46:0:-138.6:138.6\n10\t33095434\t536439:1\tC\t]10:33095535]C\t54\tPASS\tEVDNC=ASSMB;INSERTION=ATCA;MAPQ=60;MATEID=536439:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_33075001_33100001_34C;SPAN=101;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:21:54:54.2:54.2,0,80.6:21:0:-54.14:54.45\n10\t33095535\t536439:2\tT\tT[10:33095434[\t54\tPASS\tEVDNC=ASSMB;INSERTION=ATCA;MAPQ=60;MATEID=536439:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_33075001_33100001_34C;SPAN=101;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:21:54:54.2:54.2,0,80.6:21:0:-54.14:54.45\n10\t33203726\t536476:1\tT\tT[10:33204002[\t95\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=CAAAGACTGCTTTT;MAPQ=60;MATEID=536476:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_33197501_33222501_7C;SPAN=276;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:32:31:8.7:95.7,8.7,0:27:7:-95.72:95.72\n10\t33204002\t536476:2\tC\t]10:33203726]C\t95\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=CAAAGACTGCTTTT;MAPQ=60;MATEID=536476:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_33197501_33222501_7C;SPAN=276;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:32:31:8.7:95.7,8.7,0:27:7:-95.72:95.72\n10\t34395555\t536911:1\tC\tC[10:34395866[\t62\tPASS\tEVDNC=ASSMB;HOMSEQ=AAGAAAAACATCATC;MAPQ=60;MATEID=536911:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_34373501_34398501_34C;SPAN=311;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:20:23:3:62.7,3,0:20:0:-63.68:63.68\n10\t34395866\t536911:2\tA\t]10:34395555]A\t62\tPASS\tEVDNC=ASSMB;HOMSEQ=AAGAAAAACATCATC;MAPQ=60;MATEID=536911:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_34373501_34398501_34C;SPAN=311;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:20:23:3:62.7,3,0:20:0:-63.68:63.68\n10\t35304294\t537250:1\tA\tA[10:35304609[\t49\tPASS\tEVDNC=ASSMB;HOMSEQ=CTTTTTTCTCCTTTTA;MAPQ=60;MATEID=537250:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_35304501_35329501_29C;SPAN=315;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:17:14:4.5:49.5,4.5,0:17:0:-49.51:49.51\n10\t35304609\t537250:2\tC\t]10:35304294]C\t49\tPASS\tEVDNC=ASSMB;HOMSEQ=CTTTTTTCTCCTTTTA;MAPQ=60;MATEID=537250:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_35304501_35329501_29C;SPAN=315;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:17:14:4.5:49.5,4.5,0:17:0:-49.51:49.51\n10\t35610837\t537317:1\tT\t]Un_JTFH01000337v1_decoy:2001]T\t42\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=537317:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_35598501_35623501_83C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:14:14:3.9:42.9,3.9,0:14:0:-42.91:42.91\n10\t35859514\t537512:1\tA\t[10:36013231[A\t52\tPASS\tDISC_MAPQ=30;EVDNC=DSCRD;IMPRECISE;MAPQ=30;MATEID=537512:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=10:35859514(-)-10:36013231(-)__10_35990501_36015501D;SPAN=153717;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:18:0:4.8:52.8,4.8,0:0:18:-52.81:52.81\n10\t35930733\t537494:1\tG\tG[10:35932139[\t51\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=537494:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_35917001_35942001_35C;SPAN=1406;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:18:28:18.5:51.5,0,18.5:18:0:-52.37:52.37\n10\t35932139\t537494:2\tT\t]10:35930733]T\t51\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=537494:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_35917001_35942001_35C;SPAN=1406;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:18:28:18.5:51.5,0,18.5:18:0:-52.37:52.37\n10\t36013231\t537512:2\tT\t[10:35859514[T\t52\tPASS\tDISC_MAPQ=32;EVDNC=DSCRD;IMPRECISE;MAPQ=32;MATEID=537512:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=10:35859514(-)-10:36013231(-)__10_35990501_36015501D;SPAN=153717;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:18:0:4.8:52.8,4.8,0:0:18:-52.81:52.81\n10\t38527620\t539220:1\tA\tA[10:38529793[\t0\tPASS\tEVDNC=ASSMB;HOMSEQ=AATGGAATGGAATGGAATGGA;MAPQ=60;MATEID=539220:2;MATENM=3;NM=1;NUMPARTS=3;SCTG=c_10_38514001_38539001_669C;SPAN=2173;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/0:14:485:89.7:0,89.7,1400:14:0:90.12:19.18\n10\t38529793\t539220:2\tA\t]10:38527620]A\t0\tPASS\tEVDNC=ASSMB;HOMSEQ=AATGGAATGGAATGGAATGGA;MAPQ=60;MATEID=539220:1;MATENM=1;NM=3;NUMPARTS=3;SCTG=c_10_38514001_38539001_669C;SPAN=2173;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/0:14:485:89.7:0,89.7,1400:14:0:90.12:19.18\n10\t38950967\t541640:2\tT\tT]7:65499251]\t27\tPASS\tDISC_MAPQ=21;EVDNC=DSCRD;IMPRECISE;MAPQ=21;MATEID=541640:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:65499251(+)-10:38950967(+)__10_38930501_38955501D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:33:27.2:27.2,0,53.6:0:11:-27.04:27.59\n10\t39173961\t541890:1\tA\tA[10:39175116[\t92\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TTTCTGAGAAACTGCTTTGTGATGTGAGCATTCATCTCACAGA;MAPQ=60;MATEID=541890:2;MATENM=3;NM=0;NUMPARTS=2;SCTG=c_10_39151001_39176001_60C;SPAN=1155;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:30:30:8.4:92.4,8.4,0:17:16:-92.42:92.42\n10\t39175116\t541890:2\tT\t]10:39173961]T\t92\tPASS\tDISC_MAPQ=55;EVDNC=ASDIS;HOMSEQ=TTTCTGAGAAACTGCTTTGTGATGTGAGCATTCATCTCACAGA;MAPQ=60;MATEID=541890:1;MATENM=0;NM=3;NUMPARTS=2;SCTG=c_10_39151001_39176001_60C;SPAN=1155;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:30:30:8.4:92.4,8.4,0:17:16:-92.42:92.42\n10\t39347363\t542023:1\tA\tA[10:39347685[\t85\tPASS\tEVDNC=ASSMB;HOMSEQ=AAATATCCCTTTGCAGATTCTA;MAPQ=60;MATEID=542023:2;MATENM=1;NM=2;NUMPARTS=2;SCTG=c_10_39322501_39347501_49C;SPAN=322;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:28:10:7.8:85.8,7.8,0:28:0:-85.82:85.82\n10\t39347685\t542023:2\tA\t]10:39347363]A\t85\tPASS\tEVDNC=ASSMB;HOMSEQ=AAATATCCCTTTGCAGATTCTA;MAPQ=60;MATEID=542023:1;MATENM=2;NM=1;NUMPARTS=2;SCTG=c_10_39322501_39347501_49C;SPAN=322;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:28:10:7.8:85.8,7.8,0:28:0:-85.82:85.82\n10\t39406263\t542069:1\tT\tT[10:39413843[\t84\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TGAGAAACTTCTTTGTGATGTGTGCTTTCATCTCACAGAGTTGAATCTTTCTTTTGATT;MAPQ=60;MATEID=542069:2;MATENM=3;NM=2;NUMPARTS=2;SCTG=c_10_39396001_39421001_58C;SPAN=7580;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:29:39:12.2:84.8,0,12.2:13:17:-87.73:87.73\n10\t39413843\t542069:2\tT\t]10:39406263]T\t84\tPASS\tDISC_MAPQ=59;EVDNC=ASDIS;HOMSEQ=TGAGAAACTTCTTTGTGATGTGTGCTTTCATCTCACAGAGTTGAATCTTTCTTTTGATT;MAPQ=60;MATEID=542069:1;MATENM=2;NM=3;NUMPARTS=2;SCTG=c_10_39396001_39421001_58C;SPAN=7580;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:29:39:12.2:84.8,0,12.2:13:17:-87.73:87.73\n10\t39454303\t542169:1\tC\tC[10:39454773[\t73\tPASS\tDISC_MAPQ=60;EVDNC=TSI_L;HOMSEQ=TTCTGAGAATGCTTCTGTGTAGTTTTTATGTGAAGATATTTCCTTTTC;MAPQ=59;MATEID=542169:2;MATENM=8;NM=1;NUMPARTS=3;SCTG=c_10_39445001_39470001_61C;SPAN=470;SUBN=1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:25:33:7.4:73.4,0,7.4:19:6:-76.04:76.04\n10\t39454773\t542169:2\tT\t]10:39454303]T\t73\tPASS\tDISC_MAPQ=20;EVDNC=TSI_L;HOMSEQ=TTCTGAGAATGCTTCTGTGTAGTTTTTATGTGAAGATATTTCCTTTTC;MAPQ=21;MATEID=542169:1;MATENM=1;NM=8;NUMPARTS=3;SCTG=c_10_39445001_39470001_61C;SPAN=470;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:25:33:7.4:73.4,0,7.4:19:6:-76.04:76.04\n10\t39496326\t869771:1\tC\t]20:28835228]C\t22\tPASS\tDISC_MAPQ=15;EVDNC=DSCRD;IMPRECISE;MAPQ=15;MATEID=869771:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=10:39496326(-)-20:28835228(+)__20_28812001_28837001D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:50:22.4:22.4,0,101.6:0:11:-22.26:25.25\n10\t39517954\t542365:1\tG\tG[10:39523152[\t17\tPASS\tDISC_MAPQ=55;EVDNC=DSCRD;IMPRECISE;MAPQ=55;MATEID=542365:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=10:39517954(+)-10:39523152(-)__10_39518501_39543501D;SPAN=5198;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:31:17.9:17.9,0,57.5:0:8:-17.69:19\n10\t39523152\t542365:2\tT\t]10:39517954]T\t17\tPASS\tDISC_MAPQ=54;EVDNC=DSCRD;IMPRECISE;MAPQ=54;MATEID=542365:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=10:39517954(+)-10:39523152(-)__10_39518501_39543501D;SPAN=5198;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:31:17.9:17.9,0,57.5:0:8:-17.69:19\n10\t39561377\t543316:1\tT\t]10:41708970]T\t19\tPASS\tDISC_MAPQ=33;EVDNC=DSCRD;IMPRECISE;MAPQ=33;MATEID=543316:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=10:39561377(-)-10:41708970(+)__10_41699001_41724001D;SPAN=2147593;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:24:19.7:19.7,0,39.5:0:8:-19.66:20.07\n10\t39561422\t542533:1\tC\t]10:39900386]C\t36\tPASS\tDISC_MAPQ=49;EVDNC=DSCRD;IMPRECISE;MAPQ=49;MATEID=542533:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=10:39561422(-)-10:39900386(+)__10_39886001_39911001D;SPAN=338964;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:12:3:3.3:36.3,3.3,0:0:12:-36.31:36.31\n10\t39570652\t543048:1\tT\tT[10:41469918[\t46\tPASS\tDISC_MAPQ=3;EVDNC=ASDIS;HOMSEQ=TAGACAGAAGAAT;MAPQ=53;MATEID=543048:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_10_41454001_41479001_291C;SPAN=1899266;SUBN=1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:15:7:4.2:46.2,4.2,0:10:9:-46.21:46.21\n10\t39575131\t542465:1\tC\tC[10:39576801[\t30\tPASS\tDISC_MAPQ=21;EVDNC=DSCRD;IMPRECISE;MAPQ=21;MATEID=542465:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=10:39575131(+)-10:39576801(-)__10_39567501_39592501D;SPAN=1670;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:25:185:30.7:30.7,0,433.4:0:25:-30.52:51.53\n10\t39576801\t542465:2\tA\t]10:39575131]A\t30\tPASS\tDISC_MAPQ=20;EVDNC=DSCRD;IMPRECISE;MAPQ=20;MATEID=542465:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=10:39575131(+)-10:39576801(-)__10_39567501_39592501D;SPAN=1670;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:25:185:30.7:30.7,0,433.4:0:25:-30.52:51.53\n10\t39580940\t542869:1\tT\tT[10:41034331[\t59\tPASS\tDISC_MAPQ=29;EVDNC=DSCRD;IMPRECISE;MAPQ=29;MATEID=542869:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=10:39580940(+)-10:41034331(-)__10_41013001_41038001D;SPAN=1453391;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:20:4:5.4:59.4,5.4,0:0:20:-59.41:59.41\n10\t39758629\t542522:1\tG\tG[10:39844905[\t27\tPASS\tDISC_MAPQ=25;EVDNC=DSCRD;IMPRECISE;MAPQ=25;MATEID=542522:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=10:39758629(+)-10:39844905(-)__10_39837001_39862001D;SPAN=86276;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:32:27.5:27.5,0,50.6:0:11:-27.32:27.77\n10\t39844905\t542522:2\tT\t]10:39758629]T\t27\tPASS\tDISC_MAPQ=17;EVDNC=DSCRD;IMPRECISE;MAPQ=17;MATEID=542522:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=10:39758629(+)-10:39844905(-)__10_39837001_39862001D;SPAN=86276;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:32:27.5:27.5,0,50.6:0:11:-27.32:27.77\n10\t39900386\t542533:2\tA\tA[10:39561422[\t36\tPASS\tDISC_MAPQ=44;EVDNC=DSCRD;IMPRECISE;MAPQ=44;MATEID=542533:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=10:39561422(-)-10:39900386(+)__10_39886001_39911001D;SPAN=338964;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:12:3:3.3:36.3,3.3,0:0:12:-36.31:36.31\n10\t39940223\t542923:1\tC\t]10:41121404]C\t26\tPASS\tDISC_MAPQ=26;EVDNC=DSCRD;IMPRECISE;MAPQ=26;MATEID=542923:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=10:39940223(-)-10:41121404(+)__10_41111001_41136001D;SPAN=1181181;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:8:9:2.4:26.4,2.4,0:0:8:-25.7:25.7\n10\t39944712\t542980:1\tT\tT[10:41274581[\t99\tPASS\tDISC_MAPQ=41;EVDNC=ASDIS;HOMSEQ=CTAGACAGAAGAATTCTCAGTAACTTCTTTGTGTTGTGTGTATTCAACTCACAGATTTGAACCTT;MAPQ=60;MATEID=542980:2;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_10_41258001_41283001_111C;SPAN=1329869;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:34:3:9.3:102.3,9.3,0:11:25:-102.3:102.3\n10\t39956209\t542664:1\tC\tC[10:40398600[\t24\tPASS\tDISC_MAPQ=37;EVDNC=DSCRD;IMPRECISE;MAPQ=37;MATEID=542664:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=10:39956209(+)-10:40398600(-)__10_40376001_40401001D;SPAN=442391;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:54:24.5:24.5,0,110.3:0:12:-24.43:27.6\n10\t40398600\t542664:2\tT\t]10:39956209]T\t24\tPASS\tDISC_MAPQ=35;EVDNC=DSCRD;IMPRECISE;MAPQ=35;MATEID=542664:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=10:39956209(+)-10:40398600(-)__10_40376001_40401001D;SPAN=442391;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:54:24.5:24.5,0,110.3:0:12:-24.43:27.6\n10\t40616286\t542749:1\tG\tG[10:41514088[\t36\tPASS\tDISC_MAPQ=35;EVDNC=DSCRD;IMPRECISE;MAPQ=35;MATEID=542749:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=10:40616286(+)-10:41514088(-)__10_40596501_40621501D;SPAN=897802;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:12:12:3.3:36.3,3.3,0:0:12:-36.31:36.31\n10\t41034331\t542869:2\tG\t]10:39580940]G\t59\tPASS\tDISC_MAPQ=39;EVDNC=DSCRD;IMPRECISE;MAPQ=39;MATEID=542869:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=10:39580940(+)-10:41034331(-)__10_41013001_41038001D;SPAN=1453391;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:20:4:5.4:59.4,5.4,0:0:20:-59.41:59.41\n10\t41121404\t542923:2\tG\tG[10:39940223[\t26\tPASS\tDISC_MAPQ=25;EVDNC=DSCRD;IMPRECISE;MAPQ=25;MATEID=542923:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=10:39940223(-)-10:41121404(+)__10_41111001_41136001D;SPAN=1181181;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:8:9:2.4:26.4,2.4,0:0:8:-25.7:25.7\n10\t41274581\t542980:2\tC\t]10:39944712]C\t99\tPASS\tDISC_MAPQ=30;EVDNC=ASDIS;HOMSEQ=CTAGACAGAAGAATTCTCAGTAACTTCTTTGTGTTGTGTGTATTCAACTCACAGATTTGAACCTT;MAPQ=60;MATEID=542980:1;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_10_41258001_41283001_111C;SPAN=1329869;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:34:3:9.3:102.3,9.3,0:11:25:-102.3:102.3\n10\t41275126\t543061:1\tT\tT[10:41461934[\t39\tPASS\tDISC_MAPQ=41;EVDNC=DSCRD;IMPRECISE;MAPQ=41;MATEID=543061:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=10:41275126(+)-10:41461934(-)__10_41454001_41479001D;SPAN=186808;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:13:16:0.9:39.6,0.9,0:0:13:-40.41:40.41\n10\t41310093\t543068:1\tC\tC[10:41481615[\t46\tPASS\tDISC_MAPQ=20;EVDNC=ASDIS;HOMSEQ=ATGGAAATATCTTCGTGTAAAAACTACACAGAATCATTC;MAPQ=60;MATEID=543068:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_41478501_41503501_170C;SPAN=171522;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:16:10:4.2:46.2,4.2,0:5:13:-46.21:46.21\n10\t41461934\t543061:2\tG\t]10:41275126]G\t39\tPASS\tDISC_MAPQ=18;EVDNC=DSCRD;IMPRECISE;MAPQ=18;MATEID=543061:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=10:41275126(+)-10:41461934(-)__10_41454001_41479001D;SPAN=186808;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:13:16:0.9:39.6,0.9,0:0:13:-40.41:40.41\n10\t41469918\t543048:2\tT\t]10:39570652]T\t46\tPASS\tDISC_MAPQ=33;EVDNC=ASDIS;HOMSEQ=TAGACAGAAGAAT;MAPQ=53;MATEID=543048:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_10_41454001_41479001_291C;SPAN=1899266;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:15:7:4.2:46.2,4.2,0:10:9:-46.21:46.21\n10\t41481615\t543068:2\tA\t]10:41310093]A\t46\tPASS\tDISC_MAPQ=32;EVDNC=ASDIS;HOMSEQ=ATGGAAATATCTTCGTGTAAAAACTACACAGAATCATTC;MAPQ=60;MATEID=543068:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_41478501_41503501_170C;SPAN=171522;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:16:10:4.2:46.2,4.2,0:5:13:-46.21:46.21\n10\t41498909\t543111:1\tT\tT[10:41531348[\t9\tPASS\tDISC_MAPQ=25;EVDNC=DSCRD;IMPRECISE;MAPQ=25;MATEID=543111:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=10:41498909(+)-10:41531348(-)__10_41527501_41552501D;SPAN=32439;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:59:9.8:9.8,0,138.5:0:8:-9.824:16.5\n10\t41514088\t542749:2\tG\t]10:40616286]G\t36\tPASS\tDISC_MAPQ=49;EVDNC=DSCRD;IMPRECISE;MAPQ=49;MATEID=542749:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=10:40616286(+)-10:41514088(-)__10_40596501_40621501D;SPAN=897802;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:12:12:3.3:36.3,3.3,0:0:12:-36.31:36.31\n10\t41531348\t543111:2\tA\t]10:41498909]A\t9\tPASS\tDISC_MAPQ=41;EVDNC=DSCRD;IMPRECISE;MAPQ=41;MATEID=543111:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=10:41498909(+)-10:41531348(-)__10_41527501_41552501D;SPAN=32439;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:59:9.8:9.8,0,138.5:0:8:-9.824:16.5\n10\t41550926\t543141:1\tC\tC[10:41582440[\t36\tPASS\tDISC_MAPQ=17;EVDNC=DSCRD;IMPRECISE;MAPQ=17;MATEID=543141:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=10:41550926(+)-10:41582440(-)__10_41527501_41552501D;SPAN=31514;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:11:12:3.3:36.3,3.3,0:0:11:-35.86:35.86\n10\t41578760\t543295:1\tT\t]10:41580449]T\t32\tPASS\tDISC_MAPQ=28;EVDNC=DSCRD;IMPRECISE;MAPQ=28;MATEID=543295:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=10:41578760(-)-10:41580449(+)__10_41576501_41601501D;SPAN=1689;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:48:32.9:32.9,0,85.7:0:14:-32.72:34.13\n10\t41580449\t543295:2\tG\tG[10:41578760[\t32\tPASS\tDISC_MAPQ=38;EVDNC=DSCRD;IMPRECISE;MAPQ=38;MATEID=543295:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=10:41578760(-)-10:41580449(+)__10_41576501_41601501D;SPAN=1689;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:48:32.9:32.9,0,85.7:0:14:-32.72:34.13\n10\t41582440\t543141:2\tG\t]10:41550926]G\t36\tPASS\tDISC_MAPQ=42;EVDNC=DSCRD;IMPRECISE;MAPQ=42;MATEID=543141:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=10:41550926(+)-10:41582440(-)__10_41527501_41552501D;SPAN=31514;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:11:12:3.3:36.3,3.3,0:0:11:-35.86:35.86\n10\t41708970\t543316:2\tA\tA[10:39561377[\t19\tPASS\tDISC_MAPQ=18;EVDNC=DSCRD;IMPRECISE;MAPQ=18;MATEID=543316:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=10:39561377(-)-10:41708970(+)__10_41699001_41724001D;SPAN=2147593;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:24:19.7:19.7,0,39.5:0:8:-19.66:20.07\n10\t42100210\t543677:1\tA\tA[10:42100795[\t86\tPASS\tDISC_MAPQ=34;EVDNC=ASDIS;HOMSEQ=GAATGGACTCGAATGGA;MAPQ=60;MATEID=543677:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_42091001_42116001_352C;SPAN=585;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:30:45:26.9:86.3,0,26.9:26:5:-88.1:88.1\n10\t42100795\t543677:2\tG\t]10:42100210]G\t86\tPASS\tDISC_MAPQ=48;EVDNC=ASDIS;HOMSEQ=GAATGGACTCGAATGGA;MAPQ=60;MATEID=543677:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_42091001_42116001_352C;SPAN=585;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:30:45:26.9:86.3,0,26.9:26:5:-88.1:88.1\n10\t42102314\t543686:1\tG\t]10:42103670]G\t0\tPASS\tDISC_MAPQ=22;EVDNC=DSCRD;IMPRECISE;MAPQ=22;MATEID=543686:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=10:42102314(-)-10:42103670(+)__10_42091001_42116001D;SPAN=1356;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/0:8:102:2.1:0,2.1,260.7:0:8:2.263:14.5\n10\t42103670\t543686:2\tA\tA[10:42102314[\t0\tPASS\tDISC_MAPQ=43;EVDNC=DSCRD;IMPRECISE;MAPQ=43;MATEID=543686:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=10:42102314(-)-10:42103670(+)__10_42091001_42116001D;SPAN=1356;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/0:8:102:2.1:0,2.1,260.7:0:8:2.263:14.5\n10\t43261053\t544893:1\tC\t]10:43394966]C\t10\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=CG;MAPQ=60;MATEID=544893:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_43389501_43414501_79C;SPAN=133913;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:5:21:10.7:10.7,0,40.4:2:5:-10.6:11.67\n10\t43394966\t544893:2\tG\tG[10:43261053[\t10\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=CG;MAPQ=60;MATEID=544893:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_43389501_43414501_79C;SPAN=133913;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:5:21:10.7:10.7,0,40.4:2:5:-10.6:11.67\n10\t44405861\t545285:1\tG\tG[10:44406159[\t85\tPASS\tDISC_MAPQ=56;EVDNC=ASDIS;HOMSEQ=CATGTATGTTT;MAPQ=60;MATEID=545285:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_10_44394001_44419001_86C;SPAN=298;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:28:10:7.8:85.8,7.8,0:19:10:-85.82:85.82\n10\t44406159\t545285:2\tA\t]10:44405861]A\t85\tPASS\tDISC_MAPQ=58;EVDNC=ASDIS;HOMSEQ=CATGTATGTTT;MAPQ=60;MATEID=545285:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_10_44394001_44419001_86C;SPAN=298;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:28:10:7.8:85.8,7.8,0:19:10:-85.82:85.82\n10\t44927494\t545384:1\tC\t]10:44928688]C\t53\tPASS\tEVDNC=ASSMB;HOMSEQ=CA;MAPQ=60;MATEID=545384:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_44908501_44933501_69C;SPAN=1194;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:20:44:53.6:53.6,0,56.9:20:0:-53.65:53.66\n10\t44927779\t545385:1\tT\tT[10:44928703[\t24\tPASS\tEVDNC=ASSMB;INSERTION=AGTCA;MAPQ=60;MATEID=545385:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_10_44908501_44933501_67C;SPAN=924;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:41:24.8:24.8,0,77.6:11:0:-24.79:26.34\n10\t44928688\t545384:2\tA\tA[10:44927494[\t53\tPASS\tEVDNC=ASSMB;HOMSEQ=CA;MAPQ=60;MATEID=545384:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_44908501_44933501_69C;SPAN=1194;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:20:44:53.6:53.6,0,56.9:20:0:-53.65:53.66\n10\t44928703\t545385:2\tC\t]10:44927779]C\t24\tPASS\tEVDNC=ASSMB;INSERTION=AGTCA;MAPQ=60;MATEID=545385:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_10_44908501_44933501_67C;SPAN=924;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:41:24.8:24.8,0,77.6:11:0:-24.79:26.34\n10\t46106667\t545817:1\tA\t]10:46283237]A\t72\tPASS\tDISC_MAPQ=57;EVDNC=DSCRD;IMPRECISE;MAPQ=57;MATEID=545817:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=10:46106667(-)-10:46283237(+)__10_46280501_46305501D;SPAN=176570;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:24:4:6.6:72.6,6.6,0:0:24:-72.62:72.62\n10\t46283237\t545817:2\tC\tC[10:46106667[\t72\tPASS\tDISC_MAPQ=52;EVDNC=DSCRD;IMPRECISE;MAPQ=52;MATEID=545817:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=10:46106667(-)-10:46283237(+)__10_46280501_46305501D;SPAN=176570;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:24:4:6.6:72.6,6.6,0:0:24:-72.62:72.62\n10\t49470491\t546800:1\tT\t]10:49497474]T\t23\tPASS\tEVDNC=ASSMB;INSERTION=CACA;MAPQ=60;MATEID=546800:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_49490001_49515001_5C;SPAN=26983;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:21:23.9:23.9,0,27.2:9:0:-23.81:23.84\n10\t49497474\t546800:2\tT\tT[10:49470491[\t23\tPASS\tEVDNC=ASSMB;INSERTION=CACA;MAPQ=60;MATEID=546800:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_49490001_49515001_5C;SPAN=26983;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:21:23.9:23.9,0,27.2:9:0:-23.81:23.84\n10\t49795424\t546900:1\tT\tT[10:49803011[\t30\tPASS\tDISC_MAPQ=53;EVDNC=DSCRD;IMPRECISE;MAPQ=53;MATEID=546900:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=10:49795424(+)-10:49803011(-)__10_49784001_49809001D;SPAN=7587;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:21:20.6:30.5,0,20.6:0:11:-30.47:30.47\n10\t49803011\t546900:2\tA\t]10:49795424]A\t30\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=546900:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=10:49795424(+)-10:49803011(-)__10_49784001_49809001D;SPAN=7587;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:21:20.6:30.5,0,20.6:0:11:-30.47:30.47\n10\t50043661\t546988:1\tG\t[10:50135654[G\t18\tPASS\tDISC_MAPQ=55;EVDNC=DSCRD;IMPRECISE;MAPQ=55;MATEID=546988:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=10:50043661(-)-10:50135654(-)__10_50029001_50054001D;SPAN=91993;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:29:18.2:18.2,0,54.5:0:8:-18.26:19.27\n10\t50135654\t546988:2\tT\t[10:50043661[T\t18\tPASS\tDISC_MAPQ=21;EVDNC=DSCRD;IMPRECISE;MAPQ=21;MATEID=546988:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=10:50043661(-)-10:50135654(-)__10_50029001_50054001D;SPAN=91993;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:29:18.2:18.2,0,54.5:0:8:-18.26:19.27\n10\t50149982\t547039:1\tG\tG[10:50151355[\t99\tPASS\tDISC_MAPQ=21;EVDNC=DSCRD;IMPRECISE;MAPQ=21;MATEID=547039:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=10:50149982(+)-10:50151355(-)__10_50151501_50176501D;SPAN=1373;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:34:0:9.3:102.3,9.3,0:0:34:-102.3:102.3\n10\t50151355\t547039:2\tC\t]10:50149982]C\t99\tPASS\tDISC_MAPQ=38;EVDNC=DSCRD;IMPRECISE;MAPQ=38;MATEID=547039:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=10:50149982(+)-10:50151355(-)__10_50151501_50176501D;SPAN=1373;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:34:0:9.3:102.3,9.3,0:0:34:-102.3:102.3\n10\t51132282\t547341:1\tC\t]10:51156594]C\t24\tPASS\tEVDNC=ASSMB;INSERTION=AATTTCT;MAPQ=60;MATEID=547341:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_10_51156001_51181001_2C;SPAN=24312;SUBN=1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:32:24.2:24.2,0,53.9:10:0:-24.02:24.74\n10\t51156594\t547341:2\tT\tT[10:51132282[\t24\tPASS\tEVDNC=ASSMB;INSERTION=AATTTCT;MAPQ=60;MATEID=547341:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_10_51156001_51181001_2C;SPAN=24312;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:32:24.2:24.2,0,53.9:10:0:-24.02:24.74\n10\t51384972\t547381:1\tA\tA[10:51385914[\t36\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;INSERTION=GG;MAPQ=60;MATEID=547381:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_51376501_51401501_2C;SPAN=942;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:36:36.2:36.2,0,52.7:11:6:-36.1:36.3\n10\t51385914\t547381:2\tT\t]10:51384972]T\t36\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;INSERTION=GG;MAPQ=60;MATEID=547381:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_51376501_51401501_2C;SPAN=942;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:36:36.2:36.2,0,52.7:11:6:-36.1:36.3\n10\t53023898\t547993:1\tC\tC[10:53029069[\t99\tPASS\tDISC_MAPQ=58;EVDNC=DSCRD;IMPRECISE;MAPQ=58;MATEID=547993:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=10:53023898(+)-10:53029069(-)__10_53018001_53043001D;SPAN=5171;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:38:9:10.5:115.5,10.5,0:0:38:-115.5:115.5\n10\t53029069\t547993:2\tC\t]10:53023898]C\t99\tPASS\tDISC_MAPQ=54;EVDNC=DSCRD;IMPRECISE;MAPQ=54;MATEID=547993:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=10:53023898(+)-10:53029069(-)__10_53018001_53043001D;SPAN=5171;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:38:9:10.5:115.5,10.5,0:0:38:-115.5:115.5\n10\t53101060\t548047:1\tC\tC[10:53101370[\t43\tPASS\tEVDNC=ASSMB;HOMSEQ=CCCGATTTTC;MAPQ=60;MATEID=548047:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_53091501_53116501_84C;SPAN=310;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:16:34:40.1:43.4,0,40.1:16:0:-43.26:43.26\n10\t53101370\t548047:2\tC\t]10:53101060]C\t43\tPASS\tEVDNC=ASSMB;HOMSEQ=CCCGATTTTC;MAPQ=60;MATEID=548047:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_53091501_53116501_84C;SPAN=310;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:16:34:40.1:43.4,0,40.1:16:0:-43.26:43.26\n10\t53220202\t548132:1\tA\tA]10:53221322]\t20\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=A;MAPQ=60;MATEID=548132:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_53214001_53239001_57C;SPAN=1120;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:44:20.6:20.6,0,89.9:5:6:-20.64:23.11\n10\t53221322\t548132:2\tT\tT]10:53220202]\t20\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=A;MAPQ=60;MATEID=548132:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_53214001_53239001_57C;SPAN=1120;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:44:20.6:20.6,0,89.9:5:6:-20.64:23.11\n10\t53531687\t575098:1\tG\t]11:8406229]G\t26\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=575098:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=10:53531687(-)-11:8406229(+)__11_8403501_8428501D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:9:8:2.4:26.4,2.4,0:0:9:-26.41:26.41\n10\t54686224\t548789:1\tT\t]10:54709840]T\t36\tPASS\tEVDNC=ASSMB;HOMSEQ=TT;MAPQ=60;MATEID=548789:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_54708501_54733501_50C;SPAN=23616;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:12:12:3.3:36.3,3.3,0:12:0:-36.31:36.31\n10\t54709840\t548789:2\tT\tT[10:54686224[\t36\tPASS\tEVDNC=ASSMB;HOMSEQ=TT;MAPQ=60;MATEID=548789:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_54708501_54733501_50C;SPAN=23616;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:12:12:3.3:36.3,3.3,0:12:0:-36.31:36.31\n10\t54757278\t548830:1\tT\tT[10:54757581[\t23\tPASS\tEVDNC=ASSMB;HOMSEQ=AATTCTACCTT;MAPQ=60;MATEID=548830:2;MATENM=1;NM=2;NUMPARTS=2;SCTG=c_10_54757501_54782501_28C;SPAN=303;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:11:3.5:23.3,0,3.5:8:0:-24.05:24.05\n10\t54757581\t548830:2\tA\t]10:54757278]A\t23\tPASS\tEVDNC=ASSMB;HOMSEQ=AATTCTACCTT;MAPQ=60;MATEID=548830:1;MATENM=2;NM=1;NUMPARTS=2;SCTG=c_10_54757501_54782501_28C;SPAN=303;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:11:3.5:23.3,0,3.5:8:0:-24.05:24.05\n10\t54923020\t548895:1\tC\tC[10:54924599[\t49\tPASS\tEVDNC=ASSMB;HOMSEQ=GC;MAPQ=60;MATEID=548895:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_54904501_54929501_54C;SPAN=1579;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:17:17:4.5:49.5,4.5,0:17:0:-49.51:49.51\n10\t54924599\t548895:2\tG\t]10:54923020]G\t49\tPASS\tEVDNC=ASSMB;HOMSEQ=GC;MAPQ=60;MATEID=548895:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_54904501_54929501_54C;SPAN=1579;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:17:17:4.5:49.5,4.5,0:17:0:-49.51:49.51\n10\t56786728\t988246:1\tT\t[Un_KN707707v1_decoy:1[T\t52\tPASS\tDISC_MAPQ=255;EVDNC=TSI_L;MAPQ=60;MATEID=988246:2;MATENM=0;NM=0;NUMPARTS=13;REPSEQ=AA;SCTG=c_558_1_4339_0C;SPAN=-1;SUBN=3;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:18:5:4.8:52.8,4.8,0:18:0:-52.81:52.81\n10\t57255466\t549907:1\tT\tT[10:57255800[\t13\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=ATCATTCTT;MAPQ=60;MATEID=549907:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_57232001_57257001_133C;SPAN=334;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:47:13.4:13.4,0,102.5:4:6:-13.2:17.36\n10\t57255800\t549907:2\tA\t]10:57255466]A\t13\tPASS\tDISC_MAPQ=58;EVDNC=ASDIS;HOMSEQ=ATCATTCTT;MAPQ=60;MATEID=549907:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_57232001_57257001_133C;SPAN=334;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:47:13.4:13.4,0,102.5:4:6:-13.2:17.36\n10\t57450027\t549945:1\tG\tG[10:57452094[\t47\tPASS\tEVDNC=ASSMB;INSERTION=GTTAAAGATCAATC;MAPQ=60;MATEID=549945:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_57428001_57453001_8C;SPAN=2067;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:16:21:4.1:47,0,4.1:16:0:-48.75:48.75\n10\t57452094\t549945:2\tT\t]10:57450027]T\t47\tPASS\tEVDNC=ASSMB;INSERTION=GTTAAAGATCAATC;MAPQ=60;MATEID=549945:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_57428001_57453001_8C;SPAN=2067;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:16:21:4.1:47,0,4.1:16:0:-48.75:48.75\n10\t57497185\t549966:1\tT\tT[10:57498224[\t92\tPASS\tDISC_MAPQ=255;EVDNC=TSI_G;HOMSEQ=ATT;INSERTION=CATTTCTTTTTTCTTATCATTTTTTTCTTTGTCAACTATTTGATGACATCTCCAAACATCACCTTTTATTCATGACAGGAGTAGGGTATCATAGTAAAGAACACTGTTAATATAATCCAGATCCTTCACCACCTTCTGAAATATAGAGGAGCTTTAAGACTATGTTTGTTTTTCCTTGTATTTGCAGAAATAGCATGAGCTTTGTTTAAAGTCAGGCATCTAAAACCTTGCCCTGTATGTATTGACAAACTACACAAAATTTGTGATCTAT;MAPQ=60;MATEID=549966:2;MATENM=2;NM=0;NUMPARTS=3;SCTG=c_10_57477001_57502001_26C;SPAN=1039;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:31:18:8.4:92.4,8.4,0:31:0:-92.42:92.42\n10\t57497238\t549967:1\tG\tG]10:57498228]\t49\tPASS\tDISC_MAPQ=30;EVDNC=DSCRD;IMPRECISE;MAPQ=30;MATEID=549967:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=10:57497238(+)-10:57498228(+)__10_57477001_57502001D;SPAN=990;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:17:15:4.5:49.5,4.5,0:0:17:-49.51:49.51\n10\t57497899\t549968:1\tA\t[10:57498224[A\t49\tPASS\tDISC_MAPQ=255;EVDNC=TSI_L;HOMSEQ=ATT;MAPQ=60;MATEID=549968:2;MATENM=2;NM=3;NUMPARTS=3;REPSEQ=TT;SCTG=c_10_57477001_57502001_26C;SPAN=325;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:17:24:9.8:49.4,0,9.8:17:0:-50.74:50.74\n10\t57498224\t549968:2\tA\t[10:57497899[A\t49\tPASS\tDISC_MAPQ=255;EVDNC=TSI_L;HOMSEQ=ATT;MAPQ=60;MATEID=549968:1;MATENM=3;NM=2;NUMPARTS=3;REPSEQ=TT;SCTG=c_10_57477001_57502001_26C;SPAN=325;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:17:24:9.8:49.4,0,9.8:17:0:-50.74:50.74\n10\t57498224\t549966:2\tA\t]10:57497185]A\t92\tPASS\tDISC_MAPQ=255;EVDNC=TSI_G;HOMSEQ=ATT;INSERTION=CATTTCTTTTTTCTTATCATTTTTTTCTTTGTCAACTATTTGATGACATCTCCAAACATCACCTTTTATTCATGACAGGAGTAGGGTATCATAGTAAAGAACACTGTTAATATAATCCAGATCCTTCACCACCTTCTGAAATATAGAGGAGCTTTAAGACTATGTTTGTTTTTCCTTGTATTTGCAGAAATAGCATGAGCTTTGTTTAAAGTCAGGCATCTAAAACCTTGCCCTGTATGTATTGACAAACTACACAAAATTTGTGATCTAT;MAPQ=60;MATEID=549966:1;MATENM=0;NM=2;NUMPARTS=3;SCTG=c_10_57477001_57502001_26C;SPAN=1039;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:31:18:8.4:92.4,8.4,0:31:0:-92.42:92.42\n10\t57498228\t549967:2\tT\tT]10:57497238]\t49\tPASS\tDISC_MAPQ=58;EVDNC=DSCRD;IMPRECISE;MAPQ=58;MATEID=549967:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=10:57497238(+)-10:57498228(+)__10_57477001_57502001D;SPAN=990;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:17:15:4.5:49.5,4.5,0:0:17:-49.51:49.51\n10\t61983869\t551468:1\tT\tT[10:61984034[\t28\tPASS\tEVDNC=ASSMB;HOMSEQ=CCCCTTTTGTTCTT;MAPQ=60;MATEID=551468:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_61960501_61985501_50C;SPAN=165;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:28:28.4:28.4,0,41.6:11:0:-28.44:28.58\n10\t61984034\t551468:2\tC\t]10:61983869]C\t28\tPASS\tEVDNC=ASSMB;HOMSEQ=CCCCTTTTGTTCTT;MAPQ=60;MATEID=551468:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_61960501_61985501_50C;SPAN=165;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:28:28.4:28.4,0,41.6:11:0:-28.44:28.58\n10\t62238624\t551625:1\tT\t]10:62396244]T\t33\tPASS\tEVDNC=ASSMB;HOMSEQ=TG;MAPQ=60;MATEID=551625:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_62377001_62402001_11C;SPAN=157620;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:11:13:0.3:33,0.3,0:11:0:-34.67:34.67\n10\t62396244\t551625:2\tG\tG[10:62238624[\t33\tPASS\tEVDNC=ASSMB;HOMSEQ=TG;MAPQ=60;MATEID=551625:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_62377001_62402001_11C;SPAN=157620;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:11:13:0.3:33,0.3,0:11:0:-34.67:34.67\n10\t64639017\t552403:1\tA\tA[10:64640988[\t32\tPASS\tEVDNC=ASSMB;HOMSEQ=GATA;MAPQ=60;MATEID=552403:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_64631001_64656001_38C;SPAN=1971;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:25:29.3:32.6,0,29.3:12:0:-32.59:32.59\n10\t64640988\t552403:2\tG\t]10:64639017]G\t32\tPASS\tEVDNC=ASSMB;HOMSEQ=GATA;MAPQ=60;MATEID=552403:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_64631001_64656001_38C;SPAN=1971;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:25:29.3:32.6,0,29.3:12:0:-32.59:32.59\n10\t68482435\t554180:1\tA\t]10:69420212]A\t21\tPASS\tEVDNC=ASSMB;HOMSEQ=AT;MAPQ=60;MATEID=554180:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_69408501_69433501_55C;SPAN=937777;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:17:18.5:21.8,0,18.5:8:0:-21.63:21.63\n10\t68512353\t553754:1\tA\tA[10:68512662[\t33\tPASS\tEVDNC=ASSMB;HOMSEQ=AAAGATAAATGATA;MAPQ=60;MATEID=553754:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_68502001_68527001_136C;SPAN=309;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:21:17.3:33.8,0,17.3:12:0:-33.92:33.92\n10\t68512662\t553754:2\tA\t]10:68512353]A\t33\tPASS\tEVDNC=ASSMB;HOMSEQ=AAAGATAAATGATA;MAPQ=60;MATEID=553754:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_68502001_68527001_136C;SPAN=309;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:21:17.3:33.8,0,17.3:12:0:-33.92:33.92\n10\t69026605\t553996:1\tC\tC[10:69027557[\t43\tPASS\tEVDNC=ASSMB;HOMSEQ=CCTCAGCCTCCCAAAGTGCTGGGATTACAGGC;MAPQ=60;MATEID=553996:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_10_69016501_69041501_87C;SPAN=952;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:15:23:13.4:43.1,0,13.4:15:0:-43.8:43.8\n10\t69027557\t553996:2\tC\t]10:69026605]C\t43\tPASS\tEVDNC=ASSMB;HOMSEQ=CCTCAGCCTCCCAAAGTGCTGGGATTACAGGC;MAPQ=60;MATEID=553996:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_10_69016501_69041501_87C;SPAN=952;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:15:23:13.4:43.1,0,13.4:15:0:-43.8:43.8\n10\t69238368\t554126:1\tC\tC[10:69238679[\t75\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=ACCAGGTATTTTC;MAPQ=60;MATEID=554126:2;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_10_69237001_69262001_24C;SPAN=311;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:24:27:4.2:75.9,4.2,0:15:10:-77.11:77.11\n10\t69238679\t554126:2\tA\t]10:69238368]A\t75\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=ACCAGGTATTTTC;MAPQ=60;MATEID=554126:1;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_10_69237001_69262001_24C;SPAN=311;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:24:27:4.2:75.9,4.2,0:15:10:-77.11:77.11\n10\t69420212\t554180:2\tT\tT[10:68482435[\t21\tPASS\tEVDNC=ASSMB;HOMSEQ=AT;MAPQ=60;MATEID=554180:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_69408501_69433501_55C;SPAN=937777;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:17:18.5:21.8,0,18.5:8:0:-21.63:21.63\n10\t72713928\t555235:1\tT\tT[10:72716457[\t29\tPASS\tEVDNC=ASSMB;INSERTION=CTTT;MAPQ=60;MATEID=555235:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_72716001_72741001_7C;SPAN=2529;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:9:10:2.7:29.7,2.7,0:9:0:-29.08:29.08\n10\t72716457\t555235:2\tT\t]10:72713928]T\t29\tPASS\tEVDNC=ASSMB;INSERTION=CTTT;MAPQ=60;MATEID=555235:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_72716001_72741001_7C;SPAN=2529;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:9:10:2.7:29.7,2.7,0:9:0:-29.08:29.08\n10\t73082850\t555296:1\tT\tT[10:73083075[\t23\tPASS\tEVDNC=ASSMB;INSERTION=C;MAPQ=60;MATEID=555296:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_73059001_73084001_2C;SPAN=225;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:34:23.6:23.6,0,59.9:10:0:-23.45:24.42\n10\t73083075\t555296:2\tT\t]10:73082850]T\t23\tPASS\tEVDNC=ASSMB;INSERTION=C;MAPQ=60;MATEID=555296:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_73059001_73084001_2C;SPAN=225;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:34:23.6:23.6,0,59.9:10:0:-23.45:24.42\n10\t76003922\t556020:1\tC\t]10:76080167]C\t27\tPASS\tEVDNC=ASSMB;HOMSEQ=CT;MAPQ=60;MATEID=556020:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_76072501_76097501_30C;SPAN=76245;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:20:20.9:27.5,0,20.9:10:0:-27.41:27.41\n10\t76080167\t556020:2\tT\tT[10:76003922[\t27\tPASS\tEVDNC=ASSMB;HOMSEQ=CT;MAPQ=60;MATEID=556020:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_76072501_76097501_30C;SPAN=76245;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:20:20.9:27.5,0,20.9:10:0:-27.41:27.41\n10\t76495938\t556119:1\tT\tT[10:76501261[\t75\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=556119:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=10:76495938(+)-10:76501261(-)__10_76489001_76514001D;SPAN=5323;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:25:7:6.9:75.9,6.9,0:0:25:-75.92:75.92\n10\t76501261\t556119:2\tA\t]10:76495938]A\t75\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=556119:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=10:76495938(+)-10:76501261(-)__10_76489001_76514001D;SPAN=5323;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:25:7:6.9:75.9,6.9,0:0:25:-75.92:75.92\n10\t76586965\t556162:1\tC\tC[10:76591819[\t99\tPASS\tDISC_MAPQ=59;EVDNC=DSCRD;IMPRECISE;MAPQ=59;MATEID=556162:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=10:76586965(+)-10:76591819(-)__10_76587001_76612001D;SPAN=4854;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:44:14:12.3:135.3,12.3,0:0:44:-135.3:135.3\n10\t76591819\t556162:2\tA\t]10:76586965]A\t99\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=556162:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=10:76586965(+)-10:76591819(-)__10_76587001_76612001D;SPAN=4854;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:44:14:12.3:135.3,12.3,0:0:44:-135.3:135.3\n10\t77573728\t556451:2\tG\tG]2:70434172]\t10\tPASS\tDISC_MAPQ=6;EVDNC=TSI_L;HOMSEQ=ATAGAATAGAATAGAATAG;INSERTION=C;MAPQ=11;MATEID=556451:1;MATENM=0;NM=0;NUMPARTS=3;REPSEQ=AGATAAGATAAGATAAGATAAGATAAGATAAGATAAGATAAGATAAGATA;SCTG=c_10_77567001_77592001_32C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:19:3.4:10.3,0,3.4:2:9:-10.19:10.19\n10\t79332425\t556796:1\tT\tT[10:79333024[\t85\tPASS\tEVDNC=ASSMB;INSERTION=TTCTTCTCAATATAATGTCT;MAPQ=60;MATEID=556796:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_79331001_79356001_10C;SPAN=599;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:28:26:7.8:85.8,7.8,0:28:0:-85.82:85.82\n10\t79333024\t556796:2\tG\t]10:79332425]G\t85\tPASS\tEVDNC=ASSMB;INSERTION=TTCTTCTCAATATAATGTCT;MAPQ=60;MATEID=556796:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_79331001_79356001_10C;SPAN=599;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:28:26:7.8:85.8,7.8,0:28:0:-85.82:85.82\n10\t80977995\t557187:1\tT\tT[10:80978301[\t38\tPASS\tEVDNC=ASSMB;HOMSEQ=GGTGCTTTCTCTTT;MAPQ=60;MATEID=557187:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_10_80972501_80997501_67C;SPAN=306;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:26:25.7:38.9,0,25.7:14:0:-39.03:39.03\n10\t80978301\t557187:2\tG\t]10:80977995]G\t38\tPASS\tEVDNC=ASSMB;HOMSEQ=GGTGCTTTCTCTTT;MAPQ=60;MATEID=557187:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_10_80972501_80997501_67C;SPAN=306;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:26:25.7:38.9,0,25.7:14:0:-39.03:39.03\n10\t80990542\t557201:1\tG\tG[10:80992894[\t92\tPASS\tEVDNC=ASSMB;HOMSEQ=TG;MAPQ=60;MATEID=557201:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_80972501_80997501_16C;SPAN=2352;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:30:29:8.4:92.4,8.4,0:30:0:-92.42:92.42\n10\t80992894\t557201:2\tT\t]10:80990542]T\t92\tPASS\tEVDNC=ASSMB;HOMSEQ=TG;MAPQ=60;MATEID=557201:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_80972501_80997501_16C;SPAN=2352;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:30:29:8.4:92.4,8.4,0:30:0:-92.42:92.42\n10\t81144901\t557229:1\tG\tG[10:81145155[\t22\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=557229:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_10_81144001_81169001_16C;SPAN=254;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:16:15.5:22.1,0,15.5:8:0:-21.93:21.93\n10\t81145155\t557229:2\tT\t]10:81144901]T\t22\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=557229:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_10_81144001_81169001_16C;SPAN=254;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:16:15.5:22.1,0,15.5:8:0:-21.93:21.93\n10\t81212443\t988144:1\tA\t[Un_KN707693v1_decoy:1[A\t66\tPASS\tEVDNC=ASSMB;HOMSEQ=GAGTCAATTAAACCTCTTTCCTTTATAAATTA;INSERTION=CTACCGCCATGTAAAGAAGGACGTGTTTGCTTCCCTTTCCAA;MAPQ=60;MATEID=988144:2;MATENM=2;NM=0;NUMPARTS=6;SCTG=c_544_1_2899_9C;SPAN=-1;SUBN=8;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:22:7:6:66,6,0:22:0:-66.02:66.02\n10\t81212445\t988145:1\tA\tA]Un_KN707693v1_decoy:2899]\t49\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=988145:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_544_1_2899_6C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:17:5:4.5:49.5,4.5,0:17:0:-49.51:49.51\n10\t81753084\t557475:1\tA\t]10:83297494]A\t12\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;INSERTION=T;MAPQ=60;MATEID=557475:2;MATENM=0;NM=1;NUMPARTS=2;REPSEQ=AA;SCTG=c_10_81732001_81757001_7C;SECONDARY;SPAN=1544410;SUBN=6;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:5:15:12.2:12.2,0,25.4:3:3:-12.29:12.54\n10\t82229402\t557634:1\tA\tA[10:82238231[\t18\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AGAAA;MAPQ=60;MATEID=557634:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_10_82222001_82247001_45C;SPAN=8829;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:29:18.2:18.2,0,54.5:5:6:-18.26:19.27\n10\t82238231\t557634:2\tA\t]10:82229402]A\t18\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AGAAA;MAPQ=60;MATEID=557634:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_10_82222001_82247001_45C;SPAN=8829;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:29:18.2:18.2,0,54.5:5:6:-18.26:19.27\n10\t82529077\t557702:1\tT\tT[10:82658176[\t42\tPASS\tEVDNC=ASSMB;INSERTION=ATATAT;MAPQ=60;MATEID=557702:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_82638501_82663501_36C;SPAN=129099;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:14:14:3.9:42.9,3.9,0:14:0:-42.91:42.91\n10\t82658176\t557702:2\tA\t]10:82529077]A\t42\tPASS\tEVDNC=ASSMB;INSERTION=ATATAT;MAPQ=60;MATEID=557702:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_82638501_82663501_36C;SPAN=129099;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:14:14:3.9:42.9,3.9,0:14:0:-42.91:42.91\n10\t83297494\t557475:2\tG\tG[10:81753084[\t12\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;INSERTION=T;MAPQ=0;MATEID=557475:1;MATENM=1;NM=0;NUMPARTS=2;REPSEQ=AA;SCTG=c_10_81732001_81757001_7C;SECONDARY;SPAN=1544410;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:5:15:12.2:12.2,0,25.4:3:3:-12.29:12.54\n10\t83907452\t558069:1\tA\t]10:83907659]A\t34\tPASS\tEVDNC=ASSMB;INSERTION=T;MAPQ=60;MATEID=558069:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_83888001_83913001_24C;SPAN=207;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:42:34.4:34.4,0,70.7:14:0:-34.41:35.12\n10\t83907659\t558069:2\tA\tA[10:83907452[\t34\tPASS\tEVDNC=ASSMB;INSERTION=T;MAPQ=60;MATEID=558069:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_83888001_83913001_24C;SPAN=207;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:42:34.4:34.4,0,70.7:14:0:-34.41:35.12\n10\t85042018\t558387:1\tT\tT[10:85042685[\t59\tPASS\tEVDNC=ASSMB;INSERTION=CATTCTGATTAATCCTTCTTG;MAPQ=60;MATEID=558387:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_10_85039501_85064501_14C;SPAN=667;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:21:36:29.6:59.3,0,29.6:21:0:-59.66:59.66\n10\t85042021\t558389:1\tC\t]10:85042847]C\t68\tPASS\tEVDNC=ASSMB;INSERTION=AAATT;MAPQ=60;MATEID=558389:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_10_85039501_85064501_70C;SPAN=826;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:24:38:25.7:68.6,0,25.7:24:0:-69.52:69.52\n10\t85042685\t558387:2\tT\t]10:85042018]T\t59\tPASS\tEVDNC=ASSMB;INSERTION=CATTCTGATTAATCCTTCTTG;MAPQ=60;MATEID=558387:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_10_85039501_85064501_14C;SPAN=667;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:21:36:29.6:59.3,0,29.6:21:0:-59.66:59.66\n10\t85042847\t558389:2\tT\tT[10:85042021[\t68\tPASS\tEVDNC=ASSMB;INSERTION=AAATT;MAPQ=60;MATEID=558389:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_10_85039501_85064501_70C;SPAN=826;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:24:38:25.7:68.6,0,25.7:24:0:-69.52:69.52\n10\t86524714\t558731:1\tC\t]10:86524809]C\t65\tPASS\tEVDNC=ASSMB;HOMSEQ=CTG;MAPQ=60;MATEID=558731:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_86509501_86534501_39C;SPAN=95;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:24:50:58.7:65.3,0,58.7:24:0:-65.18:65.18\n10\t86524809\t558731:2\tG\tG[10:86524714[\t65\tPASS\tEVDNC=ASSMB;HOMSEQ=CTG;MAPQ=60;MATEID=558731:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_86509501_86534501_39C;SPAN=95;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:24:50:58.7:65.3,0,58.7:24:0:-65.18:65.18\n10\t87516040\t559033:1\tG\tG[10:87516812[\t49\tPASS\tDISC_MAPQ=51;EVDNC=ASDIS;INSERTION=TGAAAATACATGT;MAPQ=60;MATEID=559033:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_10_87514001_87539001_34C;SPAN=772;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:17:12:4.5:49.5,4.5,0:14:8:-49.51:49.51\n10\t87516812\t559033:2\tA\t]10:87516040]A\t49\tPASS\tDISC_MAPQ=58;EVDNC=ASDIS;INSERTION=TGAAAATACATGT;MAPQ=60;MATEID=559033:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_10_87514001_87539001_34C;SPAN=772;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:17:12:4.5:49.5,4.5,0:14:8:-49.51:49.51\n10\t88134552\t559231:1\tT\t]10:88134621]T\t41\tPASS\tDISC_MAPQ=255;EVDNC=TSI_L;HOMSEQ=ACCATCATTATAACCACCACTAC;INSERTION=CCATCACCATCATCATTATGACCACCTCACCACCACCACCACAAAGGCCATCATTATAACCACCGCTAACACTACTATCACCATCACCATCATCAT;MAPQ=60;MATEID=559231:2;MATENM=6;NM=1;NUMPARTS=3;REPSEQ=TACTACTAC;SCTG=c_10_88126501_88151501_3C;SPAN=69;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:35:80:41.8:41.8,0,49:35:0:-41.35:41.44\n10\t88134621\t559231:2\tA\tA[10:88134552[\t41\tPASS\tDISC_MAPQ=255;EVDNC=TSI_L;HOMSEQ=ACCATCATTATAACCACCACTAC;INSERTION=CCATCACCATCATCATTATGACCACCTCACCACCACCACCACAAAGGCCATCATTATAACCACCGCTAACACTACTATCACCATCACCATCATCAT;MAPQ=60;MATEID=559231:1;MATENM=1;NM=6;NUMPARTS=3;REPSEQ=TACTACTAC;SCTG=c_10_88126501_88151501_3C;SPAN=69;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:35:80:41.8:41.8,0,49:35:0:-41.35:41.44\n10\t92326236\t560176:1\tT\t]10:92336729]T\t17\tPASS\tEVDNC=ASSMB;HOMSEQ=TA;MAPQ=60;MATEID=560176:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_92316001_92341001_16C;SPAN=10493;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:42:17.9:17.9,0,87.2:9:0:-17.9:20.54\n10\t92336729\t560176:2\tA\tA[10:92326236[\t17\tPASS\tEVDNC=ASSMB;HOMSEQ=TA;MAPQ=60;MATEID=560176:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_92316001_92341001_16C;SPAN=10493;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:42:17.9:17.9,0,87.2:9:0:-17.9:20.54\n10\t92374842\t560194:1\tA\tA[10:92377897[\t59\tPASS\tEVDNC=ASSMB;INSERTION=GTTGACTTATCTTTT;MAPQ=60;MATEID=560194:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_92365001_92390001_30C;SPAN=3055;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:20:20:5.4:59.4,5.4,0:20:0:-59.41:59.41\n10\t92377897\t560194:2\tA\t]10:92374842]A\t59\tPASS\tEVDNC=ASSMB;INSERTION=GTTGACTTATCTTTT;MAPQ=60;MATEID=560194:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_92365001_92390001_30C;SPAN=3055;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:20:20:5.4:59.4,5.4,0:20:0:-59.41:59.41\n10\t93785720\t560655:1\tA\tA[10:93786739[\t99\tPASS\tEVDNC=ASSMB;INSERTION=CCACCACATGGCACACAAAAGGGTG;MAPQ=60;MATEID=560655:2;MATENM=7;NM=2;NUMPARTS=2;SCTG=c_10_93786001_93811001_55C;SPAN=1019;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:35:6:9.6:105.6,9.6,0:35:0:-105.6:105.6\n10\t93786739\t560655:2\tG\t]10:93785720]G\t99\tPASS\tEVDNC=ASSMB;INSERTION=CCACCACATGGCACACAAAAGGGTG;MAPQ=60;MATEID=560655:1;MATENM=2;NM=7;NUMPARTS=2;SCTG=c_10_93786001_93811001_55C;SPAN=1019;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:35:6:9.6:105.6,9.6,0:35:0:-105.6:105.6\n10\t94531640\t560853:2\tT\t]3:183712226]T\t23\tPASS\tEVDNC=ASSMB;HOMSEQ=TTATTTTATTTTATTTTATTTTATTTTATTTT;MAPQ=60;MATEID=560853:1;MATENM=0;NM=1;NUMPARTS=3;SCTG=c_10_94521001_94546001_53C;SECONDARY;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:21:23.9:23.9,0,27.2:9:0:-23.81:23.84\n10\t97275116\t561674:1\tG\tG[10:97277641[\t89\tPASS\tEVDNC=ASSMB;HOMSEQ=TAAAGCACTG;MAPQ=60;MATEID=561674:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_10_97265001_97290001_7C;SPAN=2525;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:29:16:8.1:89.1,8.1,0:29:0:-89.12:89.12\n10\t97277641\t561674:2\tT\t]10:97275116]T\t89\tPASS\tEVDNC=ASSMB;HOMSEQ=TAAAGCACTG;MAPQ=60;MATEID=561674:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_10_97265001_97290001_7C;SPAN=2525;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:29:16:8.1:89.1,8.1,0:29:0:-89.12:89.12\n10\t97348534\t561719:1\tT\tT[10:97348852[\t85\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=CACTATCCT;MAPQ=60;MATEID=561719:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_97338501_97363501_125C;SPAN=318;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:28:18:7.8:85.8,7.8,0:23:6:-85.82:85.82\n10\t97348852\t561719:2\tC\t]10:97348534]C\t85\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=CACTATCCT;MAPQ=60;MATEID=561719:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_97338501_97363501_125C;SPAN=318;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:28:18:7.8:85.8,7.8,0:23:6:-85.82:85.82\n10\t100092116\t562623:2\tC\t[4:152957[C\t36\tPASS\tDISC_MAPQ=9;EVDNC=ASDIS;INSERTION=C;MAPQ=60;MATEID=562623:1;MATENM=0;NM=24;NUMPARTS=2;SCTG=c_10_100082501_100107501_1C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:12:3:3.3:36.3,3.3,0:5:8:-36.31:36.31\n10\t100398553\t562722:1\tT\tT[10:100399781[\t59\tPASS\tEVDNC=ASSMB;HOMSEQ=CT;MAPQ=60;MATEID=562722:2;MATENM=5;NM=1;NUMPARTS=2;SCTG=c_10_100376501_100401501_6C;SPAN=1228;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:20:11:5.4:59.4,5.4,0:20:0:-59.41:59.41\n10\t100399781\t562722:2\tC\t]10:100398553]C\t59\tPASS\tEVDNC=ASSMB;HOMSEQ=CT;MAPQ=60;MATEID=562722:1;MATENM=1;NM=5;NUMPARTS=2;SCTG=c_10_100376501_100401501_6C;SPAN=1228;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:20:11:5.4:59.4,5.4,0:20:0:-59.41:59.41\n10\t101685980\t563070:1\tC\tC[10:101686579[\t38\tPASS\tEVDNC=ASSMB;HOMSEQ=TTC;MAPQ=60;MATEID=563070:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_101675001_101700001_27C;SPAN=599;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:28:31.7:38.3,0,31.7:14:0:-38.37:38.37\n10\t101686579\t563070:2\tT\t]10:101685980]T\t38\tPASS\tEVDNC=ASSMB;HOMSEQ=TTC;MAPQ=60;MATEID=563070:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_101675001_101700001_27C;SPAN=599;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:28:31.7:38.3,0,31.7:14:0:-38.37:38.37\n10\t103293432\t563413:1\tG\tG[10:103294423[\t79\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=GGCATGGTGGCTCACGCCTGTAATCCCAGCACTTTGGG;MAPQ=60;MATEID=563413:2;MATENM=1;NM=2;NUMPARTS=2;SCTG=c_10_103292001_103317001_15C;SPAN=991;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:26:8:7.2:79.2,7.2,0:17:10:-79.22:79.22\n10\t103294423\t563413:2\tG\t]10:103293432]G\t79\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=GGCATGGTGGCTCACGCCTGTAATCCCAGCACTTTGGG;MAPQ=60;MATEID=563413:1;MATENM=2;NM=1;NUMPARTS=2;SCTG=c_10_103292001_103317001_15C;SPAN=991;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:26:8:7.2:79.2,7.2,0:17:10:-79.22:79.22\n10\t103337782\t563426:1\tC\tC[10:103338080[\t39\tPASS\tEVDNC=ASSMB;HOMSEQ=AAAAATACAAAATTAGC;MAPQ=60;MATEID=563426:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_10_103316501_103341501_31C;SPAN=298;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:13:10:3.6:39.6,3.6,0:13:0:-39.61:39.61\n10\t103338080\t563426:2\tA\t]10:103337782]A\t39\tPASS\tEVDNC=ASSMB;HOMSEQ=AAAAATACAAAATTAGC;MAPQ=60;MATEID=563426:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_10_103316501_103341501_31C;SPAN=298;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:13:10:3.6:39.6,3.6,0:13:0:-39.61:39.61\n10\t105493244\t563943:1\tG\tG[10:105493594[\t66\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AGGG;MAPQ=60;MATEID=563943:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_105472501_105497501_69C;SPAN=350;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:22:16:6:66,6,0:13:12:-66.02:66.02\n10\t105493594\t563943:2\tA\t]10:105493244]A\t66\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AGGG;MAPQ=60;MATEID=563943:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_105472501_105497501_69C;SPAN=350;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:22:16:6:66,6,0:13:12:-66.02:66.02\n10\t106270563\t564296:1\tC\tC[10:106272784[\t38\tPASS\tEVDNC=ASSMB;HOMSEQ=CTCC;MAPQ=60;MATEID=564296:2;MATENM=0;NM=3;NUMPARTS=2;SCTG=c_10_106256501_106281501_80C;SPAN=2221;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:17:2:38.3,0,2:13:0:-39.65:39.65\n10\t106272784\t564296:2\tC\t]10:106270563]C\t38\tPASS\tEVDNC=ASSMB;HOMSEQ=CTCC;MAPQ=60;MATEID=564296:1;MATENM=3;NM=0;NUMPARTS=2;SCTG=c_10_106256501_106281501_80C;SPAN=2221;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:17:2:38.3,0,2:13:0:-39.65:39.65\n10\t108459565\t564965:1\tT\t]10:108459702]T\t23\tPASS\tEVDNC=ASSMB;HOMSEQ=TAAA;MAPQ=60;MATEID=564965:2;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_10_108437001_108462001_27C;SPAN=137;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:35:23.3:23.3,0,62.9:10:0:-23.17:24.27\n10\t108459702\t564965:2\tA\tA[10:108459565[\t23\tPASS\tEVDNC=ASSMB;HOMSEQ=TAAA;MAPQ=60;MATEID=564965:1;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_10_108437001_108462001_27C;SPAN=137;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:35:23.3:23.3,0,62.9:10:0:-23.17:24.27\n10\t108936075\t565091:1\tT\tT[10:108936418[\t32\tPASS\tDISC_MAPQ=255;EVDNC=TSI_G;HOMSEQ=ATATATATAT;INSERTION=GTATGAATATATATGTATGAATATATGAAAAA;MAPQ=60;MATEID=565091:2;MATENM=0;NM=0;NUMPARTS=3;SCTG=c_10_108927001_108952001_35C;SPAN=343;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:24:26.3:32.9,0,26.3:12:0:-32.89:32.89\n10\t108936418\t565091:2\tT\t]10:108936075]T\t32\tPASS\tDISC_MAPQ=255;EVDNC=TSI_G;HOMSEQ=ATATATATAT;INSERTION=GTATGAATATATATGTATGAATATATGAAAAA;MAPQ=60;MATEID=565091:1;MATENM=0;NM=0;NUMPARTS=3;SCTG=c_10_108927001_108952001_35C;SPAN=343;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:24:26.3:32.9,0,26.3:12:0:-32.89:32.89\n10\t109812476\t565264:1\tC\tC[10:109818458[\t75\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=565264:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=10:109812476(+)-10:109818458(-)__10_109809001_109834001D;SPAN=5982;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:25:14:6.9:75.9,6.9,0:0:25:-75.92:75.92\n10\t109818458\t565264:2\tT\t]10:109812476]T\t75\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=565264:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=10:109812476(+)-10:109818458(-)__10_109809001_109834001D;SPAN=5982;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:25:14:6.9:75.9,6.9,0:0:25:-75.92:75.92\n10\t110418405\t565388:2\tA\tA[7:93347523[\t72\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;MAPQ=60;MATEID=565388:1;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_10_110397001_110422001_54C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:24:12:6.6:72.6,6.6,0:14:15:-72.62:72.62\n10\t112352425\t565981:1\tG\tG[10:112356901[\t13\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=GG;MAPQ=60;MATEID=565981:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_112357001_112382001_92C;SPAN=4476;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:5:3:1.2:13.2,1.2,0:4:3:-13.2:13.2\n10\t112356901\t565981:2\tG\t]10:112352425]G\t13\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=GG;MAPQ=60;MATEID=565981:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_112357001_112382001_92C;SPAN=4476;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:5:3:1.2:13.2,1.2,0:4:3:-13.2:13.2\n10\t112916251\t566258:1\tT\tT[10:113538596[\t32\tPASS\tEVDNC=ASSMB;HOMSEQ=T;MAPQ=60;MATEID=566258:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_113533001_113558001_15C;SPAN=622345;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:14:2.6:32.3,0,2.6:11:0:-33.83:33.83\n10\t113538596\t566258:2\tT\t]10:112916251]T\t32\tPASS\tEVDNC=ASSMB;HOMSEQ=T;MAPQ=60;MATEID=566258:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_113533001_113558001_15C;SPAN=622345;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:14:2.6:32.3,0,2.6:11:0:-33.83:33.83\n10\t113789804\t566308:1\tC\tC[10:113790335[\t19\tPASS\tEVDNC=ASSMB;HOMSEQ=GGTGGCTCATGC;MAPQ=60;MATEID=566308:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_113778001_113803001_1C;SPAN=531;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:26:19.1:19.1,0,45.5:8:0:-19.1:19.73\n10\t113790335\t566308:2\tG\t]10:113789804]G\t19\tPASS\tEVDNC=ASSMB;HOMSEQ=GGTGGCTCATGC;MAPQ=60;MATEID=566308:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_113778001_113803001_1C;SPAN=531;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:26:19.1:19.1,0,45.5:8:0:-19.1:19.73\n10\t115697337\t566990:1\tA\t]10:115917901]A\t39\tPASS\tEVDNC=ASSMB;HOMSEQ=AT;MAPQ=60;MATEID=566990:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_115909501_115934501_2C;SPAN=220564;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:23:16.7:39.8,0,16.7:14:0:-40.18:40.18\n10\t115917901\t566990:2\tT\tT[10:115697337[\t39\tPASS\tEVDNC=ASSMB;HOMSEQ=AT;MAPQ=60;MATEID=566990:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_115909501_115934501_2C;SPAN=220564;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:23:16.7:39.8,0,16.7:14:0:-40.18:40.18\n10\t116079800\t567050:1\tA\tA[10:116121012[\t23\tPASS\tEVDNC=ASSMB;HOMSEQ=TCGA;MAPQ=60;MATEID=567050:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_116105501_116130501_72C;SPAN=41212;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:7:8:2.1:23.1,2.1,0:7:0:-22.34:22.34\n10\t116121012\t567050:2\tT\t]10:116079800]T\t23\tPASS\tEVDNC=ASSMB;HOMSEQ=TCGA;MAPQ=60;MATEID=567050:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_116105501_116130501_72C;SPAN=41212;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:7:8:2.1:23.1,2.1,0:7:0:-22.34:22.34\n10\t116902437\t567330:1\tT\t]10:116990707]T\t29\tPASS\tDISC_MAPQ=56;EVDNC=ASDIS;INSERTION=TTTTCA;MAPQ=60;MATEID=567330:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_116987501_117012501_21C;SPAN=88270;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:10:12:0:29.7,0,0:6:6:-31.35:31.35\n10\t116990707\t567330:2\tA\tA[10:116902437[\t29\tPASS\tDISC_MAPQ=58;EVDNC=ASDIS;INSERTION=TTTTCA;MAPQ=60;MATEID=567330:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_116987501_117012501_21C;SPAN=88270;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:10:12:0:29.7,0,0:6:6:-31.35:31.35\n10\t119426866\t568110:1\tT\t]10:119427330]T\t21\tPASS\tDISC_MAPQ=35;EVDNC=ASDIS;HOMSEQ=TGCCATCAACAGCATCACTGCC;MAPQ=35;MATEID=568110:2;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_10_119413001_119438001_56C;SPAN=464;SUBN=1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:53:21.5:21.5,0,110.6:4:7:-21.41:24.93\n10\t119427330\t568110:2\tC\tC[10:119426866[\t21\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TGCCATCAACAGCATCACTGCC;MAPQ=60;MATEID=568110:1;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_10_119413001_119438001_56C;SPAN=464;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:53:21.5:21.5,0,110.6:4:7:-21.41:24.93\n10\t120467203\t568417:1\tC\tC[10:120469236[\t59\tPASS\tDISC_MAPQ=54;EVDNC=ASDIS;HOMSEQ=TTTTTTTTTTGAGACGGAGTCTTGCTCTGTCGCCCAGGCTGGACTGCAGTGGCACAATCTCAGCTCACTGCAAGCTCCACCTCCCAGGTTCACACCATTCTCCTGCCTCAGCCTCCC;MAPQ=60;MATEID=568417:2;MATENM=5;NM=5;NUMPARTS=2;SCTG=c_10_120466501_120491501_15C;SPAN=2033;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:20:3:5.4:59.4,5.4,0:4:16:-59.41:59.41\n10\t120469236\t568417:2\tT\t]10:120467203]T\t59\tPASS\tDISC_MAPQ=56;EVDNC=ASDIS;HOMSEQ=TTTTTTTTTTGAGACGGAGTCTTGCTCTGTCGCCCAGGCTGGACTGCAGTGGCACAATCTCAGCTCACTGCAAGCTCCACCTCCCAGGTTCACACCATTCTCCTGCCTCAGCCTCCC;MAPQ=60;MATEID=568417:1;MATENM=5;NM=5;NUMPARTS=2;SCTG=c_10_120466501_120491501_15C;SPAN=2033;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:20:3:5.4:59.4,5.4,0:4:16:-59.41:59.41\n10\t122457304\t569156:1\tG\tG[10:122457748[\t72\tPASS\tEVDNC=ASSMB;INSERTION=TTATTAATTAATTAACTAAAATTAAATTATTTAGTTAATTTAATTAACTAAACT;MAPQ=60;MATEID=569156:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_122451001_122476001_97C;SPAN=444;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:24:17:6.6:72.6,6.6,0:24:0:-72.62:72.62\n10\t122457748\t569156:2\tA\t]10:122457304]A\t72\tPASS\tEVDNC=ASSMB;INSERTION=TTATTAATTAATTAACTAAAATTAAATTATTTAGTTAATTTAATTAACTAAACT;MAPQ=60;MATEID=569156:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_122451001_122476001_97C;SPAN=444;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:24:17:6.6:72.6,6.6,0:24:0:-72.62:72.62\n10\t121496612\t569156:2\tA\t]10:122457304]C\t72\tPASS\tEVDNC=ASSMB;INSERTION=TTATTAATTAATTAACTAAAATTAAATTATTTAGTTAATTTAATTAACTAAACT;MAPQ=60;MATEID=569156:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_122451001_122476001_97C;SPAN=444;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:24:17:6.6:72.6,6.6,0:24:0:-72.62:72.62\n10\t123254349\t569333:1\tT\t]10:123254874]T\t43\tPASS\tDISC_MAPQ=38;EVDNC=DSCRD;IMPRECISE;MAPQ=38;MATEID=569333:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=10:123254349(-)-10:123254874(+)__10_123235001_123260001D;SPAN=525;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:16:33:37.1:43.7,0,37.1:0:16:-43.55:43.55\n10\t123254874\t569333:2\tA\tA[10:123254349[\t43\tPASS\tDISC_MAPQ=46;EVDNC=DSCRD;IMPRECISE;MAPQ=46;MATEID=569333:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=10:123254349(-)-10:123254874(+)__10_123235001_123260001D;SPAN=525;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:16:33:37.1:43.7,0,37.1:0:16:-43.55:43.55\n10\t123254953\t569351:1\tC\t]10:123255771]C\t61\tPASS\tDISC_MAPQ=24;EVDNC=DSCRD;IMPRECISE;MAPQ=24;MATEID=569351:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=10:123254953(-)-10:123255771(+)__10_123235001_123260001D;SPAN=818;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:22:39:35.3:61.7,0,35.3:0:22:-62:62\n10\t123255771\t569351:2\tA\tA[10:123254953[\t61\tPASS\tDISC_MAPQ=19;EVDNC=DSCRD;IMPRECISE;MAPQ=19;MATEID=569351:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=10:123254953(-)-10:123255771(+)__10_123235001_123260001D;SPAN=818;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:22:39:35.3:61.7,0,35.3:0:22:-62:62\n10\t125501848\t570076:1\tT\t[10:125502195[T\t47\tPASS\tDISC_MAPQ=58;EVDNC=DSCRD;IMPRECISE;MAPQ=58;MATEID=570076:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=10:125501848(-)-10:125502195(-)__10_125489001_125514001D;SPAN=347;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:17:33:33.8:47,0,33.8:0:17:-46.91:46.91\n10\t125502112\t570079:1\tC\tC]10:125508653]\t99\tPASS\tEVDNC=ASSMB;HOMSEQ=GGA;MAPQ=60;MATEID=570079:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_10_125489001_125514001_4C;SPAN=6541;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:33:30:9:99,9,0:33:0:-99.02:99.02\n10\t125502195\t570076:2\tC\t[10:125501848[C\t47\tPASS\tDISC_MAPQ=57;EVDNC=DSCRD;IMPRECISE;MAPQ=57;MATEID=570076:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=10:125501848(-)-10:125502195(-)__10_125489001_125514001D;SPAN=347;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:17:33:33.8:47,0,33.8:0:17:-46.91:46.91\n10\t125502228\t570080:1\tC\t]10:125512653]C\t42\tPASS\tEVDNC=ASSMB;HOMSEQ=CCACCAT;MAPQ=60;MATEID=570080:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_125489001_125514001_23C;SPAN=10425;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:16:37:42.5:42.5,0,49.1:16:0:-42.42:42.46\n10\t125503088\t570084:1\tC\tC[10:125508666[\t57\tPASS\tEVDNC=ASSMB;HOMSEQ=GC;MAPQ=60;MATEID=570084:2;MATENM=8;NM=0;NUMPARTS=2;SCTG=c_10_125489001_125514001_8C;SPAN=5578;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:20:29:14.9:57.8,0,14.9:20:0:-59.26:59.26\n10\t125508653\t570079:2\tA\tA]10:125502112]\t99\tPASS\tEVDNC=ASSMB;HOMSEQ=GGA;MAPQ=60;MATEID=570079:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_10_125489001_125514001_4C;SPAN=6541;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:33:30:9:99,9,0:33:0:-99.02:99.02\n10\t125508666\t570084:2\tG\t]10:125503088]G\t57\tPASS\tEVDNC=ASSMB;HOMSEQ=GC;MAPQ=60;MATEID=570084:1;MATENM=0;NM=8;NUMPARTS=2;SCTG=c_10_125489001_125514001_8C;SPAN=5578;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:20:29:14.9:57.8,0,14.9:20:0:-59.26:59.26\n10\t125512653\t570080:2\tT\tT[10:125502228[\t42\tPASS\tEVDNC=ASSMB;HOMSEQ=CCACCAT;MAPQ=60;MATEID=570080:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_125489001_125514001_23C;SPAN=10425;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:16:37:42.5:42.5,0,49.1:16:0:-42.42:42.46\n10\t125894203\t907396:1\tA\tA[22:10739861[\t44\tPASS\tDISC_MAPQ=15;EVDNC=DSCRD;IMPRECISE;MAPQ=15;MATEID=907396:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=10:125894203(+)-22:10739861(-)__22_10731001_10756001D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:20:75:44.9:44.9,0,143.9:0:20:-44.94:47.83\n10\t125895950\t907397:1\tC\t]22:10741540]C\t25\tPASS\tDISC_MAPQ=40;EVDNC=DSCRD;IMPRECISE;MAPQ=40;MATEID=907397:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=10:125895950(-)-22:10741540(+)__22_10731001_10756001D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:16:12.2:25.4,0,12.2:0:9:-25.35:25.35\n10\t126251496\t570306:1\tC\t]10:126252270]C\t35\tPASS\tDISC_MAPQ=53;EVDNC=DSCRD;IMPRECISE;MAPQ=53;MATEID=570306:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=10:126251496(-)-10:126252270(+)__10_126248501_126273501D;SPAN=774;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:37:35.9:35.9,0,55.7:0:14:-35.81:36.09\n10\t126252270\t570306:2\tG\tG[10:126251496[\t35\tPASS\tDISC_MAPQ=43;EVDNC=DSCRD;IMPRECISE;MAPQ=43;MATEID=570306:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=10:126251496(-)-10:126252270(+)__10_126248501_126273501D;SPAN=774;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:37:35.9:35.9,0,55.7:0:14:-35.81:36.09\n10\t126892082\t570478:2\tA\t]7:26639999]A\t30\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=570478:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:26639999(+)-10:126892082(-)__10_126885501_126910501D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:21:20.6:30.5,0,20.6:0:11:-30.47:30.47\n10\t127169427\t570581:1\tT\tT[10:127169686[\t9\tPASS\tEVDNC=ASSMB;HOMSEQ=T;MAPQ=60;MATEID=570581:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_127155001_127180001_14C;SPAN=259;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:5:25:9.5:9.5,0,52.4:5:0:-9.478:11.24\n10\t127169686\t570581:2\tT\t]10:127169427]T\t9\tPASS\tEVDNC=ASSMB;HOMSEQ=T;MAPQ=60;MATEID=570581:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_127155001_127180001_14C;SPAN=259;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:5:25:9.5:9.5,0,52.4:5:0:-9.478:11.24\n10\t127767049\t570874:1\tT\tT[10:127767345[\t62\tPASS\tEVDNC=ASSMB;HOMSEQ=TAGTTTTTTTT;MAPQ=60;MATEID=570874:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_10_127743001_127768001_17C;SPAN=296;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:21:14:5.7:62.7,5.7,0:21:0:-62.72:62.72\n10\t127767345\t570874:2\tT\t]10:127767049]T\t62\tPASS\tEVDNC=ASSMB;HOMSEQ=TAGTTTTTTTT;MAPQ=60;MATEID=570874:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_10_127743001_127768001_17C;SPAN=296;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:21:14:5.7:62.7,5.7,0:21:0:-62.72:62.72\n10\t129038607\t571258:1\tT\tT[10:129039011[\t24\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;MAPQ=60;MATEID=571258:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_10_129017001_129042001_63C;SPAN=404;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:31:24.5:24.5,0,50.9:7:4:-24.3:24.91\n10\t129039011\t571258:2\tT\t]10:129038607]T\t24\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;MAPQ=60;MATEID=571258:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_10_129017001_129042001_63C;SPAN=404;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:31:24.5:24.5,0,50.9:7:4:-24.3:24.91\n10\t129796916\t571494:1\tA\tA[10:129797210[\t20\tPASS\tEVDNC=ASSMB;HOMSEQ=GCA;MAPQ=60;MATEID=571494:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_129776501_129801501_112C;SPAN=294;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:22:20.3:20.3,0,33.5:8:0:-20.22:20.45\n10\t129797210\t571494:2\tG\t]10:129796916]G\t20\tPASS\tEVDNC=ASSMB;HOMSEQ=GCA;MAPQ=60;MATEID=571494:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_10_129776501_129801501_112C;SPAN=294;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:22:20.3:20.3,0,33.5:8:0:-20.22:20.45\n10\t130496358\t571701:1\tC\t]10:130496511]C\t96\tPASS\tEVDNC=ASSMB;INSERTION=GCATGATGACTTCG;MAPQ=60;MATEID=571701:2;MATENM=6;NM=4;NUMPARTS=2;SCTG=c_10_130487001_130512001_9C;SPAN=153;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:36:79:96.8:96.8,0,100.1:36:0:-96.63:96.64\n10\t130496418\t571702:1\tG\t]10:130496534]G\t85\tPASS\tEVDNC=ASSMB;INSERTION=GGGATGGAAGTAACCTTCTGCATGATGACTTCGCTAGTACATGGGAGGGAA;MAPQ=60;MATEID=571702:2;MATENM=4;NM=2;NUMPARTS=2;SCTG=c_10_130487001_130512001_1C;SPAN=116;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:34:96:85.4:85.4,0,154.7:34:0:-85.25:86.4\n10\t130496511\t571701:2\tT\tT[10:130496358[\t96\tPASS\tEVDNC=ASSMB;INSERTION=GCATGATGACTTCG;MAPQ=60;MATEID=571701:1;MATENM=4;NM=6;NUMPARTS=2;SCTG=c_10_130487001_130512001_9C;SPAN=153;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:36:79:96.8:96.8,0,100.1:36:0:-96.63:96.64\n10\t130496534\t571702:2\tC\tC[10:130496418[\t85\tPASS\tEVDNC=ASSMB;INSERTION=GGGATGGAAGTAACCTTCTGCATGATGACTTCGCTAGTACATGGGAGGGAA;MAPQ=60;MATEID=571702:1;MATENM=2;NM=4;NUMPARTS=2;SCTG=c_10_130487001_130512001_1C;SPAN=116;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:34:96:85.4:85.4,0,154.7:34:0:-85.25:86.4\n10\t130790016\t571781:1\tT\t]10:130790900]T\t60\tPASS\tDISC_MAPQ=41;EVDNC=DSCRD;IMPRECISE;MAPQ=41;MATEID=571781:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=10:130790016(-)-10:130790900(+)__10_130781001_130806001D;SPAN=884;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:21:31:14.6:60.8,0,14.6:0:21:-61.93:61.93\n10\t130790062\t571782:1\tC\t]10:130790698]C\t38\tPASS\tEVDNC=ASSMB;INSERTION=TA;MAPQ=60;MATEID=571782:2;MATENM=1;NM=2;NUMPARTS=2;SCTG=c_10_130781001_130806001_6C;SPAN=636;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:16:53:38:38,0,94.1:16:0:-37.92:39.29\n10\t130790698\t571782:2\tA\tA[10:130790062[\t38\tPASS\tEVDNC=ASSMB;INSERTION=TA;MAPQ=60;MATEID=571782:1;MATENM=2;NM=1;NUMPARTS=2;SCTG=c_10_130781001_130806001_6C;SPAN=636;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:16:53:38:38,0,94.1:16:0:-37.92:39.29\n10\t130790900\t571781:2\tA\tA[10:130790016[\t60\tPASS\tDISC_MAPQ=44;EVDNC=DSCRD;IMPRECISE;MAPQ=44;MATEID=571781:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=10:130790016(-)-10:130790900(+)__10_130781001_130806001D;SPAN=884;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:21:31:14.6:60.8,0,14.6:0:21:-61.93:61.93\n10\t131176381\t571919:1\tA\t]10:131177187]A\t61\tPASS\tDISC_MAPQ=42;EVDNC=DSCRD;IMPRECISE;MAPQ=42;MATEID=571919:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=10:131176381(-)-10:131177187(+)__10_131173001_131198001D;SPAN=806;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:22:40:38.3:61.4,0,38.3:0:22:-61.64:61.64\n10\t131177187\t571919:2\tC\tC[10:131176381[\t61\tPASS\tDISC_MAPQ=50;EVDNC=DSCRD;IMPRECISE;MAPQ=50;MATEID=571919:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=10:131176381(-)-10:131177187(+)__10_131173001_131198001D;SPAN=806;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:22:40:38.3:61.4,0,38.3:0:22:-61.64:61.64\n10\t132056598\t785033:1\tA\tA[17:19919536[\t22\tPASS\tDISC_MAPQ=59;EVDNC=DSCRD;IMPRECISE;MAPQ=59;MATEID=785033:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=10:132056598(+)-17:19919536(-)__17_19918501_19943501D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:13:9.5:22.7,0,9.5:0:8:-23.02:23.02\n10\t133291375\t572642:1\tG\tG[10:133292453[\t39\tPASS\tDISC_MAPQ=54;EVDNC=DSCRD;IMPRECISE;MAPQ=54;MATEID=572642:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=10:133291375(+)-10:133292453(-)__10_133280001_133305001D;SPAN=1078;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:13:9:3.6:39.6,3.6,0:0:13:-39.61:39.61\n10\t133292453\t572642:2\tC\t]10:133291375]C\t39\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=572642:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=10:133291375(+)-10:133292453(-)__10_133280001_133305001D;SPAN=1078;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:13:9:3.6:39.6,3.6,0:0:13:-39.61:39.61\n11\t737067\t574073:1\tC\t]11:3896184]C\t69\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=CCAAAGTGCTGGGATTACAGGCG;MAPQ=60;MATEID=574073:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_11_3895501_3920501_27C;SPAN=3159117;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:23:13:6.3:69.3,6.3,0:21:5:-69.32:69.32\n11\t1078576\t573385:1\tC\tC[11:1081475[\t36\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=573385:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=11:1078576(+)-11:1081475(-)__11_1053501_1078501D;SPAN=2899;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:12:3:3.3:36.3,3.3,0:0:12:-36.31:36.31\n11\t1081475\t573385:2\tC\t]11:1078576]C\t36\tPASS\tDISC_MAPQ=43;EVDNC=DSCRD;IMPRECISE;MAPQ=43;MATEID=573385:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=11:1078576(+)-11:1081475(-)__11_1053501_1078501D;SPAN=2899;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:12:3:3.3:36.3,3.3,0:0:12:-36.31:36.31\n11\t1094541\t573395:1\tC\t]11:1095052]C\t15\tPASS\tDISC_MAPQ=7;EVDNC=TSI_L;INSERTION=TCTCCAATAACCACCACTCCCAGCCCTCCAACAACCACCATGACCACCCCTT;MAPQ=25;MATEID=573395:2;MATENM=3;NM=1;NUMPARTS=3;REPSEQ=ACCAACCA;SCTG=c_11_1078001_1103001_13C;SPAN=511;SUBN=1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:33:15:15,0,27:10:3:-14.72:15.08\n11\t1095052\t573395:2\tC\tC[11:1094541[\t15\tPASS\tDISC_MAPQ=28;EVDNC=TSI_L;INSERTION=TCTCCAATAACCACCACTCCCAGCCCTCCAACAACCACCATGACCACCCCTT;MAPQ=21;MATEID=573395:1;MATENM=1;NM=3;NUMPARTS=3;REPSEQ=ACCAACCA;SCTG=c_11_1078001_1103001_13C;SPAN=511;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:33:15:15,0,27:10:3:-14.72:15.08\n11\t1155037\t573441:1\tT\t]11:1155851]T\t79\tPASS\tDISC_MAPQ=56;EVDNC=DSCRD;IMPRECISE;MAPQ=56;MATEID=573441:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=11:1155037(-)-11:1155851(+)__11_1151501_1176501D;SPAN=814;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:26:22:7.2:79.2,7.2,0:0:26:-79.22:79.22\n11\t1155851\t573441:2\tT\tT[11:1155037[\t79\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=573441:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=11:1155037(-)-11:1155851(+)__11_1151501_1176501D;SPAN=814;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:26:22:7.2:79.2,7.2,0:0:26:-79.22:79.22\n11\t1894138\t573614:1\tG\tG[11:1915725[\t23\tPASS\tDISC_MAPQ=59;EVDNC=DSCRD;IMPRECISE;MAPQ=59;MATEID=573614:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=11:1894138(+)-11:1915725(-)__11_1911001_1936001D;SPAN=21587;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:8:2:2.1:23.1,2.1,0:0:8:-23.11:23.11\n11\t1915725\t573614:2\tT\t]11:1894138]T\t23\tPASS\tDISC_MAPQ=51;EVDNC=DSCRD;IMPRECISE;MAPQ=51;MATEID=573614:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=11:1894138(+)-11:1915725(-)__11_1911001_1936001D;SPAN=21587;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:8:2:2.1:23.1,2.1,0:0:8:-23.11:23.11\n11\t3896184\t574073:2\tG\tG[11:737067[\t69\tPASS\tDISC_MAPQ=24;EVDNC=ASDIS;HOMSEQ=CCAAAGTGCTGGGA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71501_89C;SPAN=96088;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:6:18:14.9:14.9,0,28.1:5:4:-14.75:15.05\n11\t20762949\t578367:2\tT\t[1:53954306[T\t39\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;MAPQ=60;MATEID=578367:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_20751501_20776501_46C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:13:9:3.6:39.6,3.6,0:11:3:-39.61:39.61\n11\t23346027\t579444:1\tA\t]11:23363347]A\t22\tPASS\tEVDNC=ASSMB;INSERTION=ACTGCAC;MAPQ=60;MATEID=579444:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_23348501_23373501_147C;SPAN=17320;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:16:15.5:22.1,0,15.5:8:0:-21.93:21.93\n11\t23363347\t579444:2\tG\tG[11:23346027[\t22\tPASS\tEVDNC=ASSMB;INSERTION=ACTGCAC;MAPQ=60;MATEID=579444:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_23348501_23373501_147C;SPAN=17320;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:16:15.5:22.1,0,15.5:8:0:-21.93:21.93\n11\t24263186\t579826:1\tT\tT]11:24266369]\t82\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=CT;MAPQ=60;MATEID=579826:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_24255001_24280001_12C;SPAN=3183;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:28:36:6.5:82.4,0,6.5:27:3:-85.84:85.84\n11\t24263419\t579827:1\tC\tC[11:24266243[\t67\tPASS\tDISC_MAPQ=54;EVDNC=ASDIS;HOMSEQ=AAC;MAPQ=60;MATEID=579827:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_24255001_24280001_51C;SPAN=2824;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:23:29:5:67.7,0,5:22:7:-70.94:70.94\n11\t24263577\t579828:1\tT\t[11:24266034[T\t32\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TA;MAPQ=60;MATEID=579828:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_24255001_24280001_26C;SPAN=2457;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:16:5.6:32,0,5.6:8:3:-32.57:32.57\n11\t24263704\t579829:1\tA\tA[11:24266691[\t41\tPASS\tEVDNC=ASSMB;INSERTION=TG;MAPQ=60;MATEID=579829:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_24255001_24280001_57C;SPAN=2987;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:19:4.7:41,0,4.7:14:0:-42.24:42.24\n11\t24266034\t579828:2\tT\t[11:24263577[T\t32\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TA;MAPQ=60;MATEID=579828:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_24255001_24280001_26C;SPAN=2457;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:16:5.6:32,0,5.6:8:3:-32.57:32.57\n11\t24266243\t579827:2\tA\t]11:24263419]A\t67\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AAC;MAPQ=60;MATEID=579827:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_24255001_24280001_51C;SPAN=2824;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:23:29:5:67.7,0,5:22:7:-70.94:70.94\n11\t24266369\t579826:2\tG\tG]11:24263186]\t82\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=CT;MAPQ=60;MATEID=579826:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_24255001_24280001_12C;SPAN=3183;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:28:36:6.5:82.4,0,6.5:27:3:-85.84:85.84\n11\t24266691\t579829:2\tC\t]11:24263704]C\t41\tPASS\tEVDNC=ASSMB;INSERTION=TG;MAPQ=60;MATEID=579829:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_24255001_24280001_57C;SPAN=2987;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:19:4.7:41,0,4.7:14:0:-42.24:42.24\n11\t25101793\t135182:2\tT\t[2:193213246[T\t85\tPASS\tDISC_MAPQ=56;EVDNC=ASDIS;MAPQ=60;MATEID=135182:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_2_193207001_193232001_9C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:28:27:7.8:85.8,7.8,0:25:7:-85.82:85.82\n11\t25542940\t580612:1\tT\tT[11:25543268[\t55\tPASS\tEVDNC=ASSMB;HOMSEQ=AAAACCATGGATGT;MAPQ=60;MATEID=580612:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_11_25529001_25554001_47C;SPAN=328;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:21:49:55.7:55.7,0,65.6:21:0:-55.55:55.62\n11\t25543268\t580612:2\tA\t]11:25542940]A\t55\tPASS\tEVDNC=ASSMB;HOMSEQ=AAAACCATGGATGT;MAPQ=60;MATEID=580612:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_11_25529001_25554001_47C;SPAN=328;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:21:49:55.7:55.7,0,65.6:21:0:-55.55:55.62\n11\t26007882\t580897:1\tA\tA[11:26008113[\t46\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=CAA;MAPQ=60;MATEID=580897:2;MATENM=3;NM=0;NUMPARTS=2;SCTG=c_11_25994501_26019501_114C;SPAN=231;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:15:10:4.2:46.2,4.2,0:11:5:-46.21:46.21\n11\t26008113\t580897:2\tC\t]11:26007882]C\t46\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=CAA;MAPQ=60;MATEID=580897:1;MATENM=0;NM=3;NUMPARTS=2;SCTG=c_11_25994501_26019501_114C;SPAN=231;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:15:10:4.2:46.2,4.2,0:11:5:-46.21:46.21\n11\t27635716\t581498:1\tG\tG[11:27636049[\t66\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=581498:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_27636001_27661001_23C;SPAN=333;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:22:10:6:66,6,0:22:0:-66.02:66.02\n11\t27636049\t581498:2\tC\t]11:27635716]C\t66\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=581498:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_27636001_27661001_23C;SPAN=333;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:22:10:6:66,6,0:22:0:-66.02:66.02\n11\t28985768\t581840:1\tT\tT[11:28991341[\t99\tPASS\tDISC_MAPQ=38;EVDNC=DSCRD;IMPRECISE;MAPQ=38;MATEID=581840:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=11:28985768(+)-11:28991341(-)__11_28983501_29008501D;SPAN=5573;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:34:8:9.3:102.3,9.3,0:0:34:-102.3:102.3\n11\t28991341\t581840:2\tG\t]11:28985768]G\t99\tPASS\tDISC_MAPQ=58;EVDNC=DSCRD;IMPRECISE;MAPQ=58;MATEID=581840:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=11:28985768(+)-11:28991341(-)__11_28983501_29008501D;SPAN=5573;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:34:8:9.3:102.3,9.3,0:0:34:-102.3:102.3\n11\t29946032\t582095:1\tT\tT[11:29946920[\t32\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=T;MAPQ=60;MATEID=582095:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_29939001_29964001_1C;SPAN=888;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:26:32.3:32.3,0,32.3:9:8:-32.3:32.3\n11\t29946920\t582095:2\tT\t]11:29946032]T\t32\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=T;MAPQ=60;MATEID=582095:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_29939001_29964001_1C;SPAN=888;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:26:32.3:32.3,0,32.3:9:8:-32.3:32.3\n11\t30928615\t998922:1\tA\t]Un_JTFH01000719v1_decoy:1230]A\t89\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=998922:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1562_1_1230_9C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:29:9:8.1:89.1,8.1,0:29:0:-89.12:89.12\n11\t31424301\t582447:1\tT\t]11:31433215]T\t26\tPASS\tEVDNC=ASSMB;INSERTION=ATCAAA;MAPQ=60;MATEID=582447:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_31409001_31434001_21C;SPAN=8914;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:46:26.9:26.9,0,86.3:12:0:-26.68:28.57\n11\t31433215\t582447:2\tA\tA[11:31424301[\t26\tPASS\tEVDNC=ASSMB;INSERTION=ATCAAA;MAPQ=60;MATEID=582447:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_31409001_31434001_21C;SPAN=8914;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:46:26.9:26.9,0,86.3:12:0:-26.68:28.57\n11\t32265107\t582645:1\tT\tT[11:32265428[\t23\tPASS\tEVDNC=ASSMB;HOMSEQ=AAGAAAAGGTCTT;MAPQ=60;MATEID=582645:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_32242001_32267001_80C;SPAN=321;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:36:23:23,0,65.9:10:0:-22.89:24.13\n11\t32265428\t582645:2\tA\t]11:32265107]A\t23\tPASS\tEVDNC=ASSMB;HOMSEQ=AAGAAAAGGTCTT;MAPQ=60;MATEID=582645:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_32242001_32267001_80C;SPAN=321;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:36:23:23,0,65.9:10:0:-22.89:24.13\n11\t32367805\t582688:1\tT\tT[11:32369112[\t38\tPASS\tDISC_MAPQ=58;EVDNC=DSCRD;IMPRECISE;MAPQ=58;MATEID=582688:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=11:32367805(+)-11:32369112(-)__11_32364501_32389501D;SPAN=1307;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:17:2:38.3,0,2:0:13:-39.65:39.65\n11\t32369112\t582688:2\tA\t]11:32367805]A\t38\tPASS\tDISC_MAPQ=58;EVDNC=DSCRD;IMPRECISE;MAPQ=58;MATEID=582688:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=11:32367805(+)-11:32369112(-)__11_32364501_32389501D;SPAN=1307;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:17:2:38.3,0,2:0:13:-39.65:39.65\n11\t37407661\t781898:1\tT\tT[17:10235400[\t33\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;MAPQ=60;MATEID=781898:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_17_10216501_10241501_78C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:11:11:3:33,3,0:9:5:-33.01:33.01\n11\t37940512\t584524:1\tG\tG[11:37940821[\t35\tPASS\tEVDNC=ASSMB;HOMSEQ=AAGAAAATGCTTATTAG;MAPQ=60;MATEID=584524:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_37926001_37951001_124C;SPAN=309;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:27:32:35.3,0,32:13:0:-35.33:35.33\n11\t37940821\t584524:2\tA\t]11:37940512]A\t35\tPASS\tEVDNC=ASSMB;HOMSEQ=AAGAAAATGCTTATTAG;MAPQ=60;MATEID=584524:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_37926001_37951001_124C;SPAN=309;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:27:32:35.3,0,32:13:0:-35.33:35.33\n11\t38791106\t452809:2\tG\t]8:51819021]G\t82\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=452809:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=8:51819021(+)-11:38791106(-)__8_51817501_51842501D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:27:10:7.5:82.5,7.5,0:0:27:-82.52:82.52\n11\t38791187\t452806:2\tT\tT[8:51817582[\t49\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=452806:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=8:51817582(-)-11:38791187(+)__8_51817501_51842501D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:17:13:4.5:49.5,4.5,0:0:17:-49.51:49.51\n11\t39783577\t585236:1\tT\tT[11:39783900[\t64\tPASS\tEVDNC=ASSMB;HOMSEQ=CAATTTGTAATAT;MAPQ=60;MATEID=585236:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_39763501_39788501_72C;SPAN=323;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:22:30:11.3:64.1,0,11.3:22:0:-66.29:66.29\n11\t39783900\t585236:2\tC\t]11:39783577]C\t64\tPASS\tEVDNC=ASSMB;HOMSEQ=CAATTTGTAATAT;MAPQ=60;MATEID=585236:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_39763501_39788501_72C;SPAN=323;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:22:30:11.3:64.1,0,11.3:22:0:-66.29:66.29\n11\t40597161\t585534:1\tC\tC[11:40597644[\t19\tPASS\tEVDNC=ASSMB;HOMSEQ=AC;MAPQ=60;MATEID=585534:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_40596501_40621501_146C;SPAN=483;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:26:19.1:19.1,0,45.5:8:0:-19.1:19.73\n11\t40597644\t585534:2\tA\t]11:40597161]A\t19\tPASS\tEVDNC=ASSMB;HOMSEQ=AC;MAPQ=60;MATEID=585534:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_40596501_40621501_146C;SPAN=483;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:26:19.1:19.1,0,45.5:8:0:-19.1:19.73\n11\t40904857\t585625:2\tC\t]6:32320801]C\t39\tPASS\tEVDNC=ASSMB;INSERTION=G;MAPQ=60;MATEID=585625:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_40890501_40915501_5C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:12:13:3.6:39.6,3.6,0:12:0:-39.28:39.28\n11\t41140440\t585728:1\tA\t[11:41145493[A\t14\tPASS\tDISC_MAPQ=58;EVDNC=ASDIS;INSERTION=ATTCCTACTGATCCATCAGAACCAA;MAPQ=60;MATEID=585728:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_41135501_41160501_22C;SPAN=5053;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:7:33:14:14,0,66.8:6:3:-13.83:15.94\n11\t41145493\t585728:2\tA\t[11:41140440[A\t14\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;INSERTION=ATTCCTACTGATCCATCAGAACCAA;MAPQ=60;MATEID=585728:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_41135501_41160501_22C;SPAN=5053;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:7:33:14:14,0,66.8:6:3:-13.83:15.94\n11\t42248172\t586023:1\tG\tG]11:42253506]\t37\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=CCTCCTGG;MAPQ=60;MATEID=586023:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_42238001_42263001_14C;SPAN=5334;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:20:11:37.4,0,11:10:7:-37.93:37.93\n11\t42248419\t586024:1\tC\t[11:42253515[C\t34\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=C;MAPQ=60;MATEID=586024:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_42238001_42263001_9C;SPAN=5096;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:18:8.3:34.7,0,8.3:8:6:-35.24:35.24\n11\t42253506\t586023:2\tG\tG]11:42248172]\t37\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=CCTCCTGG;MAPQ=60;MATEID=586023:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_42238001_42263001_14C;SPAN=5334;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:20:11:37.4,0,11:10:7:-37.93:37.93\n11\t42253515\t586024:2\tG\t[11:42248419[G\t34\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=C;MAPQ=60;MATEID=586024:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_42238001_42263001_9C;SPAN=5096;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:18:8.3:34.7,0,8.3:8:6:-35.24:35.24\n11\t43634621\t886988:1\tT\tT[20:57463311[\t22\tPASS\tEVDNC=ASSMB;HOMSEQ=T;MAPQ=60;MATEID=886988:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_57452501_57477501_4C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:60:22.7:22.7,0,128.3:12:0:-22.75:26.98\n11\t45377756\t213057:2\tC\t[3:196591623[C\t99\tPASS\tDISC_MAPQ=13;EVDNC=ASDIS;HOMSEQ=CTCTGTCACCCAGGCTGGAGTGCAATGGCGCGATCTCGGCTCACTGCAA;MAPQ=49;MATEID=213057:1;MATENM=1;NM=2;NUMPARTS=2;SCTG=c_3_196588001_196613001_28C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:45:15:12.6:138.6,12.6,0:44:7:-138.6:138.6\n11\t45796115\t586861:1\tG\t[11:45799999[G\t58\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=C;MAPQ=60;MATEID=586861:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_11_45790501_45815501_20C;SPAN=3884;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:20:28:11.9:58.1,0,11.9:14:13:-59.83:59.83\n11\t45798229\t600590:1\tT\tT]11:86852881]\t46\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=600590:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=11:45798229(+)-11:86852881(+)__11_86852501_86877501D;SPAN=41054652;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:16:15:4.2:46.2,4.2,0:0:16:-46.21:46.21\n11\t45799999\t586861:2\tC\t[11:45796115[C\t58\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=C;MAPQ=60;MATEID=586861:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_11_45790501_45815501_20C;SPAN=3884;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:20:28:11.9:58.1,0,11.9:14:13:-59.83:59.83\n11\t46014697\t586937:1\tG\tG[11:46015032[\t51\tPASS\tEVDNC=ASSMB;HOMSEQ=AATAGTTATTCTG;MAPQ=60;MATEID=586937:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_46011001_46036001_60C;SPAN=335;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:19:39:45.2:51.8,0,45.2:19:0:-51.77:51.77\n11\t46015032\t586937:2\tA\t]11:46014697]A\t51\tPASS\tEVDNC=ASSMB;HOMSEQ=AATAGTTATTCTG;MAPQ=60;MATEID=586937:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_46011001_46036001_60C;SPAN=335;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:19:39:45.2:51.8,0,45.2:19:0:-51.77:51.77\n11\t46139466\t586977:1\tT\tT[11:46140850[\t99\tPASS\tEVDNC=ASSMB;INSERTION=GA;MAPQ=60;MATEID=586977:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_46133501_46158501_61C;SPAN=1384;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:45:25:12.6:138.6,12.6,0:45:0:-138.6:138.6\n11\t46140850\t586977:2\tA\t]11:46139466]A\t99\tPASS\tEVDNC=ASSMB;INSERTION=GA;MAPQ=60;MATEID=586977:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_46133501_46158501_61C;SPAN=1384;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:45:25:12.6:138.6,12.6,0:45:0:-138.6:138.6\n11\t46721219\t587147:1\tT\t]11:46722062]T\t52\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TTTTTAGTAGAGACGGGGTTTCACCATGTTGGCCAGGCTGGTC;MAPQ=60;MATEID=587147:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_46721501_46746501_23C;SPAN=843;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:18:18:4.8:52.8,4.8,0:11:11:-52.81:52.81\n11\t46722062\t587147:2\tC\tC[11:46721219[\t52\tPASS\tDISC_MAPQ=52;EVDNC=ASDIS;HOMSEQ=TTTTTAGTAGAGACGGGGTTTCACCATGTTGGCCAGGCTGGTC;MAPQ=60;MATEID=587147:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_46721501_46746501_23C;SPAN=843;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:18:18:4.8:52.8,4.8,0:11:11:-52.81:52.81\n11\t47638400\t587549:1\tT\tT]Un_KN707750v1_decoy:4718]\t92\tPASS\tEVDNC=ASSMB;HOMSEQ=CGTCTCTACTAAAAATACAAAAAAT;INSERTION=CCACATTAGAATTGGGGGCTATGTTAAAGCCTTAAAAAGTACACTGAGGACTGCAGGAACTGTTGCTATGTTTATATATATATGCAATTTTTTAGAGACAGGGTCTCAC;MAPQ=60;MATEID=587549:2;MATENM=0;NM=1;NUMPARTS=5;SCTG=c_11_47628001_47653001_50C;SPAN=-1;SUBN=7;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:30:19:8.4:92.4,8.4,0:30:0:-92.42:92.42\n11\t47866115\t587678:1\tT\tT[11:47866643[\t47\tPASS\tEVDNC=ASSMB;INSERTION=T;MAPQ=60;MATEID=587678:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_47848501_47873501_36C;SPAN=528;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:16:21:4.1:47,0,4.1:16:0:-48.75:48.75\n11\t47866643\t587678:2\tT\t]11:47866115]T\t47\tPASS\tEVDNC=ASSMB;INSERTION=T;MAPQ=60;MATEID=587678:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_47848501_47873501_36C;SPAN=528;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:16:21:4.1:47,0,4.1:16:0:-48.75:48.75\n11\t47893214\t587688:2\tC\tC]11:15686349]\t92\tPASS\tDISC_MAPQ=36;EVDNC=ASDIS;HOMSEQ=CCTCTGCCC;MAPQ=60;MATEID=587688:1;MATENM=3;NM=1;NUMPARTS=2;SCTG=c_11_47873001_47898001_103C;SPAN=32206865;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:31:14:8.4:92.4,8.4,0:26:5:-92.42:92.42\n11\t48098519\t587784:1\tT\tT[11:48098819[\t62\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TTTATCTCTT;MAPQ=60;MATEID=587784:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_48093501_48118501_81C;SPAN=300;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:21:21:5.7:62.7,5.7,0:15:8:-62.72:62.72\n11\t48098819\t587784:2\tT\t]11:48098519]T\t62\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TTTATCTCTT;MAPQ=60;MATEID=587784:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_48093501_48118501_81C;SPAN=300;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:21:21:5.7:62.7,5.7,0:15:8:-62.72:62.72\n11\t48425278\t587888:1\tG\tG[11:48425559[\t99\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AAAAATCAGATGGTTG;MAPQ=60;MATEID=587888:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_48412001_48437001_21C;SPAN=281;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:46:15:12.6:138.6,12.6,0:42:4:-138.6:138.6\n11\t48425559\t587888:2\tA\t]11:48425278]A\t99\tPASS\tDISC_MAPQ=58;EVDNC=ASDIS;HOMSEQ=AAAAATCAGATGGTTG;MAPQ=60;MATEID=587888:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_48412001_48437001_21C;SPAN=281;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:46:15:12.6:138.6,12.6,0:42:4:-138.6:138.6\n11\t48579306\t587957:1\tC\tC[11:48582731[\t41\tPASS\tEVDNC=ASSMB;HOMSEQ=TC;MAPQ=60;MATEID=587957:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_11_48559001_48584001_185C;SPAN=3425;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:15:31:34.4:41,0,34.4:15:0:-40.81:40.81\n11\t48582731\t587957:2\tT\t]11:48579306]T\t41\tPASS\tEVDNC=ASSMB;HOMSEQ=TC;MAPQ=60;MATEID=587957:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_11_48559001_48584001_185C;SPAN=3425;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:15:31:34.4:41,0,34.4:15:0:-40.81:40.81\n11\t48692511\t588007:1\tC\tC[11:48693522[\t47\tPASS\tEVDNC=ASSMB;HOMSEQ=AAACCTTTCTTTTCATTC;MAPQ=60;MATEID=588007:2;MATENM=1;NM=2;NUMPARTS=2;SCTG=c_11_48681501_48706501_76C;SPAN=1011;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:17:33:33.8:47,0,33.8:17:0:-46.91:46.91\n11\t48693522\t588007:2\tA\t]11:48692511]A\t47\tPASS\tEVDNC=ASSMB;HOMSEQ=AAACCTTTCTTTTCATTC;MAPQ=60;MATEID=588007:1;MATENM=2;NM=1;NUMPARTS=2;SCTG=c_11_48681501_48706501_76C;SPAN=1011;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:17:33:33.8:47,0,33.8:17:0:-46.91:46.91\n11\t48713228\t588025:1\tT\tT[11:48715397[\t82\tPASS\tDISC_MAPQ=38;EVDNC=ASDIS;HOMSEQ=TTCTCAGAAAGCTTCTTTCTAGTTTTTATTTGAAGATATTTCCTTTTT;MAPQ=60;MATEID=588025:2;MATENM=0;NM=3;NUMPARTS=2;SCTG=c_11_48706001_48731001_50C;SPAN=2169;SUBN=1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:28:36:6.5:82.4,0,6.5:10:22:-85.84:85.84\n11\t48715397\t588025:2\tT\t]11:48713228]T\t82\tPASS\tDISC_MAPQ=59;EVDNC=ASDIS;HOMSEQ=TTCTCAGAAAGCTTCTTTCTAGTTTTTATTTGAAGATATTTCCTTTTT;MAPQ=60;MATEID=588025:1;MATENM=3;NM=0;NUMPARTS=2;SCTG=c_11_48706001_48731001_50C;SPAN=2169;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:28:36:6.5:82.4,0,6.5:10:22:-85.84:85.84\n11\t48788958\t588088:1\tG\tG[11:48789585[\t99\tPASS\tDISC_MAPQ=55;EVDNC=ASDIS;HOMSEQ=ATGTGAAGATATTTCGTATTTCCCCAGAGGTCTCAATGGGCTCACAAATATCCCTTTG;MAPQ=60;MATEID=588088:2;MATENM=4;NM=5;NUMPARTS=2;SCTG=c_11_48779501_48804501_8C;SPAN=627;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:39:30:10.8:118.8,10.8,0:25:16:-118.8:118.8\n11\t48789585\t588088:2\tA\t]11:48788958]A\t99\tPASS\tDISC_MAPQ=59;EVDNC=ASDIS;HOMSEQ=ATGTGAAGATATTTCGTATTTCCCCAGAGGTCTCAATGGGCTCACAAATATCCCTTTG;MAPQ=60;MATEID=588088:1;MATENM=5;NM=4;NUMPARTS=2;SCTG=c_11_48779501_48804501_8C;SPAN=627;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:39:30:10.8:118.8,10.8,0:25:16:-118.8:118.8\n11\t48859208\t588242:1\tA\tA[11:48860190[\t99\tPASS\tDISC_MAPQ=53;EVDNC=ASDIS;HOMSEQ=TAGACAGAAGCATTCTCAGAAACGTCTTTGTGATGATTGCATTCA;MAPQ=60;MATEID=588242:2;MATENM=4;NM=3;NUMPARTS=2;SCTG=c_11_48853001_48878001_28C;SPAN=982;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:53:15:14.7:161.7,14.7,0:31:33:-161.7:161.7\n11\t48860190\t588242:2\tT\t]11:48859208]T\t99\tPASS\tDISC_MAPQ=55;EVDNC=ASDIS;HOMSEQ=TAGACAGAAGCATTCTCAGAAACGTCTTTGTGATGATTGCATTCA;MAPQ=60;MATEID=588242:1;MATENM=3;NM=4;NUMPARTS=2;SCTG=c_11_48853001_48878001_28C;SPAN=982;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:53:15:14.7:161.7,14.7,0:31:33:-161.7:161.7\n11\t49817800\t589101:1\tC\t]11:49852451]C\t22\tPASS\tDISC_MAPQ=50;EVDNC=DSCRD;IMPRECISE;MAPQ=50;MATEID=589101:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=11:49817800(-)-11:49852451(+)__11_49808501_49833501D;SPAN=34651;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:14:12.5:22.4,0,12.5:0:8:-22.62:22.62\n11\t49852451\t589101:2\tG\tG[11:49817800[\t22\tPASS\tDISC_MAPQ=56;EVDNC=DSCRD;IMPRECISE;MAPQ=56;MATEID=589101:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=11:49817800(-)-11:49852451(+)__11_49808501_49833501D;SPAN=34651;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:14:12.5:22.4,0,12.5:0:8:-22.62:22.62\n11\t50147426\t589366:1\tC\tC]11:50331713]\t36\tPASS\tDISC_MAPQ=55;EVDNC=DSCRD;IMPRECISE;MAPQ=55;MATEID=589366:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=11:50147426(+)-11:50331713(+)__11_50323001_50348001D;SPAN=184287;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:11:12:3.3:36.3,3.3,0:0:11:-35.86:35.86\n11\t50203333\t589296:1\tA\tA[11:50206864[\t36\tPASS\tEVDNC=ASSMB;HOMSEQ=GTGGCA;MAPQ=60;MATEID=589296:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_50200501_50225501_52C;SPAN=3531;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:36:36.2:36.2,0,52.7:14:0:-36.1:36.3\n11\t50206864\t589296:2\tG\t]11:50203333]G\t36\tPASS\tEVDNC=ASSMB;HOMSEQ=GTGGCA;MAPQ=60;MATEID=589296:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_50200501_50225501_52C;SPAN=3531;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:36:36.2:36.2,0,52.7:14:0:-36.1:36.3\n11\t50331713\t589366:2\tT\tT]11:50147426]\t36\tPASS\tDISC_MAPQ=58;EVDNC=DSCRD;IMPRECISE;MAPQ=58;MATEID=589366:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=11:50147426(+)-11:50331713(+)__11_50323001_50348001D;SPAN=184287;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:11:12:3.3:36.3,3.3,0:0:11:-35.86:35.86\n11\t50725179\t589562:1\tA\tA[11:50725446[\t70\tPASS\tDISC_MAPQ=43;EVDNC=ASDIS;HOMSEQ=AGA;MAPQ=50;MATEID=589562:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_50715001_50740001_108C;SPAN=267;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:24:32:7.7:70.4,0,7.7:18:8:-72.78:72.78\n11\t50725446\t589562:2\tA\t]11:50725179]A\t70\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AGA;MAPQ=60;MATEID=589562:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_50715001_50740001_108C;SPAN=267;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:24:32:7.7:70.4,0,7.7:18:8:-72.78:72.78\n11\t51090773\t589949:1\tT\t]11:52010440]T\t23\tPASS\tDISC_MAPQ=20;EVDNC=DSCRD;IMPRECISE;MAPQ=20;MATEID=589949:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=11:51090773(-)-11:52010440(+)__11_51989001_52014001D;SPAN=919667;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:8:6:2.1:23.1,2.1,0:0:8:-23.11:23.11\n11\t51148091\t589867:1\tT\tT[11:53674586[\t26\tPASS\tDISC_MAPQ=25;EVDNC=DSCRD;IMPRECISE;MAPQ=25;MATEID=589867:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=11:51148091(+)-11:53674586(-)__11_51131501_51156501D;SPAN=2526495;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:9:8:2.4:26.4,2.4,0:0:9:-26.41:26.41\n11\t51472984\t590301:1\tT\t]11:53945514]T\t26\tPASS\tDISC_MAPQ=38;EVDNC=DSCRD;IMPRECISE;MAPQ=38;MATEID=590301:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=11:51472984(-)-11:53945514(+)__11_53924501_53949501D;SPAN=2472530;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:9:5:2.4:26.4,2.4,0:0:9:-26.41:26.41\n11\t52010440\t589949:2\tT\tT[11:51090773[\t23\tPASS\tDISC_MAPQ=39;EVDNC=DSCRD;IMPRECISE;MAPQ=39;MATEID=589949:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=11:51090773(-)-11:52010440(+)__11_51989001_52014001D;SPAN=919667;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:8:6:2.1:23.1,2.1,0:0:8:-23.11:23.11\n11\t52680399\t590204:1\tC\t]11:53344504]C\t26\tPASS\tDISC_MAPQ=23;EVDNC=DSCRD;IMPRECISE;MAPQ=23;MATEID=590204:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=11:52680399(-)-11:53344504(+)__11_53336501_53361501D;SPAN=664105;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:9:5:2.4:26.4,2.4,0:0:9:-26.41:26.41\n11\t53344504\t590204:2\tA\tA[11:52680399[\t26\tPASS\tDISC_MAPQ=15;EVDNC=DSCRD;IMPRECISE;MAPQ=15;MATEID=590204:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=11:52680399(-)-11:53344504(+)__11_53336501_53361501D;SPAN=664105;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:9:5:2.4:26.4,2.4,0:0:9:-26.41:26.41\n11\t53674586\t589867:2\tT\t]11:51148091]T\t26\tPASS\tDISC_MAPQ=18;EVDNC=DSCRD;IMPRECISE;MAPQ=18;MATEID=589867:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=11:51148091(+)-11:53674586(-)__11_51131501_51156501D;SPAN=2526495;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:9:8:2.4:26.4,2.4,0:0:9:-26.41:26.41\n11\t53945514\t590301:2\tG\tG[11:51472984[\t26\tPASS\tDISC_MAPQ=41;EVDNC=DSCRD;IMPRECISE;MAPQ=41;MATEID=590301:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=11:51472984(-)-11:53945514(+)__11_53924501_53949501D;SPAN=2472530;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:9:5:2.4:26.4,2.4,0:0:9:-26.41:26.41\n11\t54345246\t590459:1\tC\t]11:54372905]C\t29\tPASS\tDISC_MAPQ=16;EVDNC=DSCRD;IMPRECISE;MAPQ=16;MATEID=590459:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=11:54345246(-)-11:54372905(+)__11_54365501_54390501D;SPAN=27659;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:10:5:2.7:29.7,2.7,0:0:10:-29.71:29.71\n11\t54347483\t590434:1\tT\tT[11:54403730[\t59\tPASS\tDISC_MAPQ=29;EVDNC=DSCRD;IMPRECISE;MAPQ=29;MATEID=590434:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=11:54347483(+)-11:54403730(-)__11_54341001_54366001D;SPAN=56247;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:19:22:2.7:59.4,2.7,0:0:19:-60.34:60.34\n11\t54347532\t590435:1\tT\tT[11:54406005[\t23\tPASS\tDISC_MAPQ=16;EVDNC=DSCRD;IMPRECISE;MAPQ=16;MATEID=590435:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=11:54347532(+)-11:54406005(-)__11_54341001_54366001D;SPAN=58473;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:8:8:2.1:23.1,2.1,0:0:8:-23.11:23.11\n11\t54369337\t590539:1\tC\tC[11:54406068[\t20\tPASS\tDISC_MAPQ=34;EVDNC=DSCRD;IMPRECISE;MAPQ=34;MATEID=590539:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=11:54369337(+)-11:54406068(-)__11_54390001_54415001D;SPAN=36731;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:21:20.6:20.6,0,30.5:0:8:-20.51:20.65\n11\t54372905\t590459:2\tA\tA[11:54345246[\t29\tPASS\tDISC_MAPQ=16;EVDNC=DSCRD;IMPRECISE;MAPQ=16;MATEID=590459:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=11:54345246(-)-11:54372905(+)__11_54365501_54390501D;SPAN=27659;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:10:5:2.7:29.7,2.7,0:0:10:-29.71:29.71\n11\t54374313\t590545:1\tT\tT[11:54409169[\t39\tPASS\tDISC_MAPQ=38;EVDNC=DSCRD;IMPRECISE;MAPQ=38;MATEID=590545:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=11:54374313(+)-11:54409169(-)__11_54390001_54415001D;SPAN=34856;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:13:7:3.6:39.6,3.6,0:0:13:-39.61:39.61\n11\t54374525\t590490:1\tG\t]11:54421527]G\t21\tPASS\tDISC_MAPQ=22;EVDNC=DSCRD;IMPRECISE;MAPQ=22;MATEID=590490:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=11:54374525(-)-11:54421527(+)__11_54365501_54390501D;SPAN=47002;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:30:21.2:21.2,0,54.2:0:9:-21.28:22.07\n11\t54403730\t590434:2\tT\t]11:54347483]T\t59\tPASS\tDISC_MAPQ=52;EVDNC=DSCRD;IMPRECISE;MAPQ=52;MATEID=590434:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=11:54347483(+)-11:54403730(-)__11_54341001_54366001D;SPAN=56247;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:19:22:2.7:59.4,2.7,0:0:19:-60.34:60.34\n11\t54406005\t590435:2\tT\t]11:54347532]T\t23\tPASS\tDISC_MAPQ=19;EVDNC=DSCRD;IMPRECISE;MAPQ=19;MATEID=590435:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=11:54347532(+)-11:54406005(-)__11_54341001_54366001D;SPAN=58473;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:8:8:2.1:23.1,2.1,0:0:8:-23.11:23.11\n11\t54406068\t590539:2\tA\t]11:54369337]A\t20\tPASS\tDISC_MAPQ=29;EVDNC=DSCRD;IMPRECISE;MAPQ=29;MATEID=590539:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=11:54369337(+)-11:54406068(-)__11_54390001_54415001D;SPAN=36731;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:21:20.6:20.6,0,30.5:0:8:-20.51:20.65\n11\t54409169\t590545:2\tT\t]11:54374313]T\t39\tPASS\tDISC_MAPQ=22;EVDNC=DSCRD;IMPRECISE;MAPQ=22;MATEID=590545:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=11:54374313(+)-11:54409169(-)__11_54390001_54415001D;SPAN=34856;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:13:7:3.6:39.6,3.6,0:0:13:-39.61:39.61\n11\t54415654\t590614:1\tC\t]11:54549099]C\t19\tPASS\tDISC_MAPQ=50;EVDNC=DSCRD;IMPRECISE;MAPQ=50;MATEID=590614:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=11:54415654(-)-11:54549099(+)__11_54537001_54562001D;SPAN=133445;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:37:19.4:19.4,0,72.2:0:9:-19.31:21.11\n11\t54421527\t590490:2\tT\tT[11:54374525[\t21\tPASS\tDISC_MAPQ=26;EVDNC=DSCRD;IMPRECISE;MAPQ=26;MATEID=590490:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=11:54374525(-)-11:54421527(+)__11_54365501_54390501D;SPAN=47002;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:30:21.2:21.2,0,54.2:0:9:-21.28:22.07\n11\t54544141\t590639:1\tA\tA[11:54548140[\t69\tPASS\tDISC_MAPQ=41;EVDNC=DSCRD;IMPRECISE;MAPQ=41;MATEID=590639:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=11:54544141(+)-11:54548140(-)__11_54537001_54562001D;SPAN=3999;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:22:25:3.6:69.3,3.6,0:0:22:-70.38:70.38\n11\t54548140\t590639:2\tT\t]11:54544141]T\t69\tPASS\tDISC_MAPQ=35;EVDNC=DSCRD;IMPRECISE;MAPQ=35;MATEID=590639:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=11:54544141(+)-11:54548140(-)__11_54537001_54562001D;SPAN=3999;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:22:25:3.6:69.3,3.6,0:0:22:-70.38:70.38\n11\t54549099\t590614:2\tA\tA[11:54415654[\t19\tPASS\tDISC_MAPQ=54;EVDNC=DSCRD;IMPRECISE;MAPQ=54;MATEID=590614:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=11:54415654(-)-11:54549099(+)__11_54537001_54562001D;SPAN=133445;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:37:19.4:19.4,0,72.2:0:9:-19.31:21.11\n11\t54929760\t590741:1\tC\t]11:54937289]C\t70\tPASS\tDISC_MAPQ=59;EVDNC=ASDIS;HOMSEQ=CAGATTCTACAACAACAGTGTTTCCAAAC;MAPQ=60;MATEID=590741:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_11_54929001_54954001_5C;SPAN=7529;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:24:31:4.7:70.7,0,4.7:16:14:-73.47:73.47\n11\t54937289\t590741:2\tC\tC[11:54929760[\t70\tPASS\tDISC_MAPQ=59;EVDNC=ASDIS;HOMSEQ=CAGATTCTACAACAACAGTGTTTCCAAAC;MAPQ=60;MATEID=590741:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_11_54929001_54954001_5C;SPAN=7529;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:24:31:4.7:70.7,0,4.7:16:14:-73.47:73.47\n11\t55239601\t590830:1\tT\tT[11:55239896[\t72\tPASS\tDISC_MAPQ=58;EVDNC=ASDIS;HOMSEQ=AAGTGGATATTTGGAGTGCTTTGAGGCCTATGGTGGAAAAGGAAATAT;MAPQ=60;MATEID=590830:2;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_11_55223001_55248001_52C;SPAN=295;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:24:17:6.6:72.6,6.6,0:16:9:-72.62:72.62\n11\t55239896\t590830:2\tA\t]11:55239601]A\t72\tPASS\tDISC_MAPQ=52;EVDNC=ASDIS;HOMSEQ=AAGTGGATATTTGGAGTGCTTTGAGGCCTATGGTGGAAAAGGAAATAT;MAPQ=60;MATEID=590830:1;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_11_55223001_55248001_52C;SPAN=295;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:24:17:6.6:72.6,6.6,0:16:9:-72.62:72.62\n11\t56497246\t608067:1\tG\t[11:117255064[G\t41\tPASS\tDISC_MAPQ=55;EVDNC=ASDIS;HOMSEQ=C;MAPQ=60;MATEID=608067:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_117232501_117257501_23C;SPAN=60757818;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:18:1.7:41.3,0,1.7:8:11:-42.92:42.92\n11\t58434792\t591564:1\tT\t]11:58456014]T\t30\tPASS\tDISC_MAPQ=29;EVDNC=ASDIS;INSERTION=GAGTTCAAGACCAGCTTGAAC;MAPQ=60;MATEID=591564:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_58432501_58457501_0C;SPAN=21222;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:20:17.6:30.8,0,17.6:9:7:-30.82:30.82\n11\t58456014\t591564:2\tG\tG[11:58434792[\t30\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;INSERTION=GAGTTCAAGACCAGCTTGAAC;MAPQ=60;MATEID=591564:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_58432501_58457501_0C;SPAN=21222;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:20:17.6:30.8,0,17.6:9:7:-30.82:30.82\n11\t58826715\t591625:1\tT\tT[11:58828547[\t46\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=591625:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_11_58824501_58849501_2C;SPAN=1832;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:15:8:4.2:46.2,4.2,0:15:0:-46.21:46.21\n11\t58828547\t591625:2\tT\t]11:58826715]T\t46\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=591625:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_11_58824501_58849501_2C;SPAN=1832;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:15:8:4.2:46.2,4.2,0:15:0:-46.21:46.21\n11\t59041829\t591672:1\tA\tA[11:59042145[\t75\tPASS\tDISC_MAPQ=54;EVDNC=ASDIS;HOMSEQ=AAGAATTCCAAGTGTTA;MAPQ=60;MATEID=591672:2;MATENM=5;NM=0;NUMPARTS=2;SCTG=c_11_59020501_59045501_5C;SPAN=316;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:25:8:6.9:75.9,6.9,0:21:5:-75.92:75.92\n11\t59042145\t591672:2\tA\t]11:59041829]A\t75\tPASS\tDISC_MAPQ=58;EVDNC=ASDIS;HOMSEQ=AAGAATTCCAAGTGTTA;MAPQ=60;MATEID=591672:1;MATENM=0;NM=5;NUMPARTS=2;SCTG=c_11_59020501_59045501_5C;SPAN=316;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:25:8:6.9:75.9,6.9,0:21:5:-75.92:75.92\n11\t59681933\t591775:2\tG\t[1:113684515[G\t46\tPASS\tDISC_MAPQ=59;EVDNC=ASDIS;MAPQ=60;MATEID=591775:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_59682001_59707001_10C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:16:6:4.2:46.2,4.2,0:8:13:-46.21:46.21\n11\t60986887\t592149:1\tG\t]11:60990806]G\t35\tPASS\tDISC_MAPQ=3;EVDNC=TSI_L;HOMSEQ=GGA;MAPQ=14;MATEID=592149:2;MATENM=0;NM=0;NUMPARTS=3;SCTG=c_11_60980501_61005501_89C;SPAN=3919;SUBN=1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:25:26:35.9,0,26:13:4:-35.95:35.95\n11\t60990806\t592149:2\tA\tA[11:60986887[\t35\tPASS\tDISC_MAPQ=60;EVDNC=TSI_L;HOMSEQ=GGA;MAPQ=60;MATEID=592149:1;MATENM=0;NM=0;NUMPARTS=3;SCTG=c_11_60980501_61005501_89C;SPAN=3919;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:25:26:35.9,0,26:13:4:-35.95:35.95\n11\t62009715\t592412:1\tC\t]11:62010599]C\t31\tPASS\tDISC_MAPQ=58;EVDNC=DSCRD;IMPRECISE;MAPQ=58;MATEID=592412:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=11:62009715(-)-11:62010599(+)__11_62009501_62034501D;SPAN=884;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:18:11.6:31.4,0,11.6:0:11:-31.6:31.6\n11\t62010599\t592412:2\tG\tG[11:62009715[\t31\tPASS\tDISC_MAPQ=56;EVDNC=DSCRD;IMPRECISE;MAPQ=56;MATEID=592412:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=11:62009715(-)-11:62010599(+)__11_62009501_62034501D;SPAN=884;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:18:11.6:31.4,0,11.6:0:11:-31.6:31.6\n11\t62074341\t592458:1\tG\tG[14:81320430[\t99\tPASS\tEVDNC=ASSMB;INSERTION=C;MAPQ=60;MATEID=592458:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_62058501_62083501_23C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:33:31:9:99,9,0:33:0:-99.02:99.02\n11\t62143053\t592515:1\tC\t]11:62143188]C\t25\tPASS\tEVDNC=ASSMB;HOMSEQ=CCACACTTTTGGGATCACAGCTCCTCC;MAPQ=60;MATEID=592515:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_62132001_62157001_20C;SPAN=135;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:39:25.4:25.4,0,71.6:11:0:-25.35:26.63\n11\t62143188\t592515:2\tC\tC[11:62143053[\t25\tPASS\tEVDNC=ASSMB;HOMSEQ=CCACACTTTTGGGATCACAGCTCCTCC;MAPQ=60;MATEID=592515:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_62132001_62157001_20C;SPAN=135;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:39:25.4:25.4,0,71.6:11:0:-25.35:26.63\n11\t62177315\t592530:1\tA\tA[11:62177614[\t56\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=592530:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_62156501_62181501_84C;SPAN=299;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:19:24:3.2:56,0,3.2:19:0:-58.57:58.57\n11\t62177614\t592530:2\tT\t]11:62177315]T\t56\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=592530:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_62156501_62181501_84C;SPAN=299;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:19:24:3.2:56,0,3.2:19:0:-58.57:58.57\n11\t63559621\t592884:1\tA\tA[Un_KN707705v1_decoy:1[\t48\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=592884:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_63553001_63578001_31C;SPAN=-1;SUBN=1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:17:26:15.8:48.8,0,15.8:17:0:-49.68:49.68\n11\t63559621\t988237:1\tA\tA[Un_KN707705v1_decoy:1[\t42\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=988237:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_556_1_4632_0C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:14:4:3.9:42.9,3.9,0:14:0:-42.91:42.91\n11\t63931435\t592993:1\tC\t]11:63934472]C\t99\tPASS\tEVDNC=ASSMB;INSERTION=TCAGGGTACAAAAGGT;MAPQ=60;MATEID=592993:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_63920501_63945501_26C;SPAN=3037;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:36:34:9.9:108.9,9.9,0:36:0:-108.9:108.9\n11\t63931437\t592994:1\tG\tG[11:63934182[\t80\tPASS\tEVDNC=ASSMB;HOMSEQ=G;MAPQ=60;MATEID=592994:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_11_63920501_63945501_50C;SPAN=2745;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:28:41:21.5:80.9,0,21.5:28:0:-82.75:82.75\n11\t63934182\t592994:2\tG\t]11:63931437]G\t80\tPASS\tEVDNC=ASSMB;HOMSEQ=G;MAPQ=60;MATEID=592994:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_11_63920501_63945501_50C;SPAN=2745;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:28:41:21.5:80.9,0,21.5:28:0:-82.75:82.75\n11\t63934472\t592993:2\tG\tG[11:63931435[\t99\tPASS\tEVDNC=ASSMB;INSERTION=TCAGGGTACAAAAGGT;MAPQ=60;MATEID=592993:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_63920501_63945501_26C;SPAN=3037;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:36:34:9.9:108.9,9.9,0:36:0:-108.9:108.9\n11\t65426022\t593388:1\tA\tA[11:65426240[\t22\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=593388:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_65415001_65440001_11C;SPAN=218;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:37:22.7:22.7,0,68.9:10:0:-22.61:23.99\n11\t65426240\t593388:2\tT\t]11:65426022]T\t22\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=593388:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_65415001_65440001_11C;SPAN=218;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:37:22.7:22.7,0,68.9:10:0:-22.61:23.99\n11\t65440194\t593780:1\tC\t]11:66536950]C\t32\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=CT;MAPQ=60;MATEID=593780:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_66517501_66542501_11C;SPAN=1096756;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:16:5.6:32,0,5.6:8:6:-32.57:32.57\n11\t65874744\t593571:1\tA\tA[11:65876048[\t99\tPASS\tDISC_MAPQ=57;EVDNC=DSCRD;IMPRECISE;MAPQ=57;MATEID=593571:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=11:65874744(+)-11:65876048(-)__11_65856001_65881001D;SPAN=1304;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:39:6:10.8:118.8,10.8,0:0:39:-118.8:118.8\n11\t65876048\t593571:2\tT\t]11:65874744]T\t99\tPASS\tDISC_MAPQ=56;EVDNC=DSCRD;IMPRECISE;MAPQ=56;MATEID=593571:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=11:65874744(+)-11:65876048(-)__11_65856001_65881001D;SPAN=1304;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:39:6:10.8:118.8,10.8,0:0:39:-118.8:118.8\n11\t66251221\t593686:1\tG\tG]11:66252427]\t33\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=CCATGCCCGGC;MAPQ=60;MATEID=593686:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_11_66248001_66273001_58C;SPAN=1206;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:34:33.5:33.5,0,50:10:4:-33.36:33.58\n11\t66251586\t593687:1\tA\t[11:66252433[A\t28\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AACATGGTGAAACCCCGTCTCTACTAAAAATACAAAA;MAPQ=60;MATEID=593687:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_66248001_66273001_48C;SPAN=847;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:29:28.1:28.1,0,44.6:4:8:-28.16:28.37\n11\t66252427\t593686:2\tC\tC]11:66251221]\t33\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=CCATGCCCGGC;MAPQ=60;MATEID=593686:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_11_66248001_66273001_58C;SPAN=1206;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:34:33.5:33.5,0,50:10:4:-33.36:33.58\n11\t66252433\t593687:2\tT\t[11:66251586[T\t28\tPASS\tDISC_MAPQ=52;EVDNC=ASDIS;HOMSEQ=AACATGGTGAAACCCCGTCTCTACTAAAAATACAAAA;MAPQ=60;MATEID=593687:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_66248001_66273001_48C;SPAN=847;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:29:28.1:28.1,0,44.6:4:8:-28.16:28.37\n11\t66496959\t716565:1\tG\t[14:103842390[G\t34\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=GGAGG;MAPQ=60;MATEID=716565:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_103831001_103856001_0C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:20:14.3:34.1,0,14.3:10:5:-34.32:34.32\n11\t66501326\t716602:1\tC\tC]14:103910481]\t33\tPASS\tDISC_MAPQ=51;EVDNC=ASDIS;HOMSEQ=G;MAPQ=60;MATEID=716602:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_103904501_103929501_1C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:21:17.3:33.8,0,17.3:8:6:-33.92:33.92\n11\t66536950\t593780:2\tT\tT[11:65440194[\t32\tPASS\tDISC_MAPQ=56;EVDNC=ASDIS;HOMSEQ=CT;MAPQ=60;MATEID=593780:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_66517501_66542501_11C;SPAN=1096756;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:16:5.6:32,0,5.6:8:6:-32.57:32.57\n11\t66609733\t707094:1\tT\t]14:77757579]T\t20\tPASS\tDISC_MAPQ=51;EVDNC=DSCRD;IMPRECISE;MAPQ=51;MATEID=707094:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=11:66609733(-)-14:77757579(+)__14_77738501_77763501D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:20:20.9:20.9,0,27.5:0:8:-20.79:20.87\n11\t66985273\t593887:1\tC\t]11:67081007]C\t33\tPASS\tDISC_MAPQ=52;EVDNC=ASDIS;INSERTION=TCA;MAPQ=60;MATEID=593887:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_67056501_67081501_1C;SPAN=95734;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:11:9:3:33,3,0:7:8:-33.01:33.01\n11\t67081007\t593887:2\tT\tT[11:66985273[\t33\tPASS\tDISC_MAPQ=54;EVDNC=ASDIS;INSERTION=TCA;MAPQ=30;MATEID=593887:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_67056501_67081501_1C;SPAN=95734;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:11:9:3:33,3,0:7:8:-33.01:33.01\n11\t67233499\t593930:1\tA\tA[Un_JTFH01000424v1_decoy:1[\t82\tPASS\tEVDNC=ASSMB;HOMSEQ=ACGTCTCTACTAAAAATACAA;MAPQ=60;MATEID=593930:2;MATENM=0;NM=1;NUMPARTS=3;SCTG=c_11_67228001_67253001_41C;SECONDARY;SPAN=-1;SUBN=1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:27:10:7.5:82.5,7.5,0:27:0:-82.52:82.52\n11\t68515146\t594493:1\tC\t]11:68643930]C\t19\tPASS\tDISC_MAPQ=40;EVDNC=DSCRD;IMPRECISE;MAPQ=40;MATEID=594493:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=11:68515146(-)-11:68643930(+)__11_68624501_68649501D;SPAN=128784;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:24:19.7:19.7,0,39.5:0:8:-19.66:20.07\n11\t68515404\t594495:1\tA\tA[11:68644342[\t21\tPASS\tDISC_MAPQ=42;EVDNC=DSCRD;IMPRECISE;MAPQ=42;MATEID=594495:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=11:68515404(+)-11:68644342(-)__11_68624501_68649501D;SPAN=128938;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:19:21.2:21.2,0,24.5:0:8:-21.07:21.11\n11\t68643930\t594493:2\tG\tG[11:68515146[\t19\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=594493:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=11:68515146(-)-11:68643930(+)__11_68624501_68649501D;SPAN=128784;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:24:19.7:19.7,0,39.5:0:8:-19.66:20.07\n11\t68644342\t594495:2\tT\t]11:68515404]T\t21\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=594495:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=11:68515404(+)-11:68644342(-)__11_68624501_68649501D;SPAN=128938;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:19:21.2:21.2,0,24.5:0:8:-21.07:21.11\n11\t70136449\t595239:1\tC\tC[11:70138382[\t45\tPASS\tEVDNC=ASSMB;HOMSEQ=CTC;MAPQ=60;MATEID=595239:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_70119001_70144001_87C;SPAN=1933;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:16:25:16.1:45.8,0,16.1:16:0:-46.5:46.5\n11\t70138382\t595239:2\tC\t]11:70136449]C\t45\tPASS\tEVDNC=ASSMB;HOMSEQ=CTC;MAPQ=60;MATEID=595239:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_70119001_70144001_87C;SPAN=1933;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:16:25:16.1:45.8,0,16.1:16:0:-46.5:46.5\n11\t71600176\t595839:1\tT\t]11:71900157]T\t26\tPASS\tDISC_MAPQ=39;EVDNC=DSCRD;IMPRECISE;MAPQ=39;MATEID=595839:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=11:71600176(-)-11:71900157(+)__11_71589001_71614001D;SPAN=299981;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:23:26.6:26.6,0,29.9:0:10:-26.55:26.57\n11\t71900157\t595839:2\tC\tC[11:71600176[\t26\tPASS\tDISC_MAPQ=29;EVDNC=DSCRD;IMPRECISE;MAPQ=29;MATEID=595839:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=11:71600176(-)-11:71900157(+)__11_71589001_71614001D;SPAN=299981;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:23:26.6:26.6,0,29.9:0:10:-26.55:26.57\n11\t72150565\t596054:1\tT\tT[11:72150869[\t99\tPASS\tEVDNC=ASSMB;HOMSEQ=TACTGAATTGTT;MAPQ=60;MATEID=596054:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_72128001_72153001_76C;SPAN=304;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:48:29:13.2:145.2,13.2,0:48:0:-145.2:145.2\n11\t72150869\t596054:2\tT\t]11:72150565]T\t99\tPASS\tEVDNC=ASSMB;HOMSEQ=TACTGAATTGTT;MAPQ=60;MATEID=596054:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_72128001_72153001_76C;SPAN=304;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:48:29:13.2:145.2,13.2,0:48:0:-145.2:145.2\n11\t73967021\t608936:1\tT\t[11:119253540[T\t99\tPASS\tDISC_MAPQ=2;EVDNC=TSI_L;INSERTION=CATGCACCACCACACCCAGCTAA;MAPQ=60;MATEID=608936:2;MATENM=0;NM=2;NUMPARTS=3;REPSEQ=TTT;SCTG=c_11_119241501_119266501_36C;SPAN=45286519;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:41:15:11.4:125.4,11.4,0:37:7:-125.4:125.4\n11\t73998981\t596583:1\tG\t]11:73999180]G\t68\tPASS\tEVDNC=ASSMB;HOMSEQ=GTGCAGTGGTGT;MAPQ=60;MATEID=596583:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_11_73990001_74015001_13C;SPAN=199;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:27:73:68.6:68.6,0,114.8:27:0:-68.61:69.25\n11\t73999180\t596583:2\tT\tT[11:73998981[\t68\tPASS\tEVDNC=ASSMB;HOMSEQ=GTGCAGTGGTGT;MAPQ=60;MATEID=596583:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_11_73990001_74015001_13C;SPAN=199;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:27:73:68.6:68.6,0,114.8:27:0:-68.61:69.25\n11\t74821378\t596838:1\tG\tG[11:74821679[\t68\tPASS\tEVDNC=ASSMB;HOMSEQ=AAAAGAATACAAGTGCGGG;MAPQ=60;MATEID=596838:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_74798501_74823501_57C;SPAN=301;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:23:28:2:68,0,2:23:0:-71.75:71.75\n11\t74821679\t596838:2\tA\t]11:74821378]A\t68\tPASS\tEVDNC=ASSMB;HOMSEQ=AAAAGAATACAAGTGCGGG;MAPQ=60;MATEID=596838:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_74798501_74823501_57C;SPAN=301;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:23:28:2:68,0,2:23:0:-71.75:71.75\n11\t75259137\t596962:1\tC\tC[11:75259412[\t3\tPASS\tEVDNC=ASSMB;HOMSEQ=TTGCAGTGAGCCGAGATCGCGCC;MAPQ=60;MATEID=596962:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_75239501_75264501_20C;SPAN=275;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:5:47:3.5:3.5,0,112.4:5:0:-3.294:9.753\n11\t75259412\t596962:2\tT\t]11:75259137]T\t3\tPASS\tEVDNC=ASSMB;HOMSEQ=TTGCAGTGAGCCGAGATCGCGCC;MAPQ=60;MATEID=596962:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_75239501_75264501_20C;SPAN=275;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:5:47:3.5:3.5,0,112.4:5:0:-3.294:9.753\n11\t75299453\t597034:1\tA\t]11:75426606]A\t38\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AAA;MAPQ=60;MATEID=597034:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_75411001_75436001_53C;SPAN=127153;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:27:28.7:38.6,0,28.7:9:11:-38.69:38.69\n11\t75426606\t597034:2\tA\tA[11:75299453[\t38\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AAA;MAPQ=60;MATEID=597034:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_75411001_75436001_53C;SPAN=127153;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:27:28.7:38.6,0,28.7:9:11:-38.69:38.69\n11\t75857851\t597159:1\tT\t]11:75857976]T\t19\tPASS\tEVDNC=ASSMB;HOMSEQ=T;MAPQ=60;MATEID=597159:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_75852001_75877001_15C;SPAN=125;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:50:19.1:19.1,0,104.9:10:0:-18.96:22.48\n11\t75857976\t597159:2\tT\tT[11:75857851[\t19\tPASS\tEVDNC=ASSMB;HOMSEQ=T;MAPQ=60;MATEID=597159:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_75852001_75877001_15C;SPAN=125;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:50:19.1:19.1,0,104.9:10:0:-18.96:22.48\n11\t76704166\t597476:1\tA\t]11:76896079]A\t13\tPASS\tEVDNC=ASSMB;INSERTION=GTCACGGGGA;MAPQ=60;MATEID=597476:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_76881001_76906001_31C;SPAN=191913;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:7:34:13.7:13.7,0,69.8:7:0:-13.55:15.84\n11\t76896079\t597476:2\tT\tT[11:76704166[\t13\tPASS\tEVDNC=ASSMB;INSERTION=GTCACGGGGA;MAPQ=60;MATEID=597476:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_76881001_76906001_31C;SPAN=191913;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:7:34:13.7:13.7,0,69.8:7:0:-13.55:15.84\n11\t78154046\t153237:2\tA\tA]3:10636914]\t37\tPASS\tDISC_MAPQ=55;EVDNC=ASDIS;INSERTION=AAA;MAPQ=60;MATEID=153237:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_3_10633001_10658001_4C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:21:14:37.1,0,14:10:4:-37.47:37.47\n11\t79416445\t598284:1\tA\t]11:79479471]A\t36\tPASS\tDISC_MAPQ=55;EVDNC=ASDIS;INSERTION=ATTTTCTTTA;MAPQ=60;MATEID=598284:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_79478001_79503001_20C;SPAN=63026;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:23:20:36.5,0,20:4:10:-36.66:36.66\n11\t79479471\t598284:2\tA\tA[11:79416445[\t36\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;INSERTION=ATTTTCTTTA;MAPQ=60;MATEID=598284:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_79478001_79503001_20C;SPAN=63026;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:23:20:36.5,0,20:4:10:-36.66:36.66\n11\t85506446\t600483:1\tT\t[11:86544042[T\t56\tPASS\tDISC_MAPQ=51;EVDNC=ASDIS;HOMSEQ=TTTATTTCTGCCTTTATTTCATTATGTACCCAGTAATCATTCAGGAG;MAPQ=60;MATEID=600483:2;MATENM=2;NM=1;NUMPARTS=2;SCTG=c_11_86534001_86559001_130C;SPAN=1037596;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:19:15:5.1:56.1,5.1,0:15:5:-56.11:56.11\n11\t85506693\t600484:1\tG\tG]11:86543942]\t35\tPASS\tDISC_MAPQ=53;EVDNC=DSCRD;IMPRECISE;MAPQ=53;MATEID=600484:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=11:85506693(+)-11:86543942(+)__11_86534001_86559001D;SPAN=1037249;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:17:5.3:35,0,5.3:0:12:-35.78:35.78\n11\t86543942\t600484:2\tC\tC]11:85506693]\t35\tPASS\tDISC_MAPQ=53;EVDNC=DSCRD;IMPRECISE;MAPQ=53;MATEID=600484:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=11:85506693(+)-11:86543942(+)__11_86534001_86559001D;SPAN=1037249;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:17:5.3:35,0,5.3:0:12:-35.78:35.78\n11\t86544042\t600483:2\tC\t[11:85506446[C\t56\tPASS\tDISC_MAPQ=56;EVDNC=ASDIS;HOMSEQ=TTTATTTCTGCCTTTATTTCATTATGTACCCAGTAATCATTCAGGAG;MAPQ=60;MATEID=600483:1;MATENM=1;NM=2;NUMPARTS=2;SCTG=c_11_86534001_86559001_130C;SPAN=1037596;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:19:15:5.1:56.1,5.1,0:15:5:-56.11:56.11\n11\t86686540\t600538:2\tA\tA[4:130410267[\t30\tPASS\tDISC_MAPQ=43;EVDNC=DSCRD;IMPRECISE;MAPQ=43;MATEID=600538:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=4:130410267(-)-11:86686540(+)__11_86681001_86706001D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:22:23.6:30.2,0,23.6:0:11:-30.15:30.15\n11\t86852881\t600590:2\tT\tT]11:45798229]\t46\tPASS\tDISC_MAPQ=48;EVDNC=DSCRD;IMPRECISE;MAPQ=48;MATEID=600590:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=11:45798229(+)-11:86852881(+)__11_86852501_86877501D;SPAN=41054652;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:16:15:4.2:46.2,4.2,0:0:16:-46.21:46.21\n11\t90222202\t601482:1\tA\t]11:90222426]A\t8\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=601482:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_90209001_90234001_9C;SPAN=224;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:5:29:8.3:8.3,0,64.4:5:0:-8.353:10.88\n11\t90222426\t601482:2\tA\tA[11:90222202[\t8\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=601482:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_90209001_90234001_9C;SPAN=224;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:5:29:8.3:8.3,0,64.4:5:0:-8.353:10.88\n11\t91132847\t601769:1\tT\tT[11:91134495[\t39\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;INSERTION=TTAAAATATTTAAAAACATTTAAA;MAPQ=60;MATEID=601769:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_11_91115501_91140501_2C;SPAN=1648;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:13:16:0.9:39.6,0.9,0:8:7:-40.41:40.41\n11\t91134495\t601769:2\tA\t]11:91132847]A\t39\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;INSERTION=TTAAAATATTTAAAAACATTTAAA;MAPQ=60;MATEID=601769:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_11_91115501_91140501_2C;SPAN=1648;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:13:16:0.9:39.6,0.9,0:8:7:-40.41:40.41\n11\t92076576\t601925:1\tG\t]11:92094632]G\t22\tPASS\tDISC_MAPQ=42;EVDNC=DSCRD;IMPRECISE;MAPQ=42;MATEID=601925:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=11:92076576(-)-11:92094632(+)__11_92071001_92096001D;SPAN=18056;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:15:15.5:22.1,0,15.5:0:8:-22.25:22.25\n11\t92094632\t601925:2\tA\tA[11:92076576[\t22\tPASS\tDISC_MAPQ=31;EVDNC=DSCRD;IMPRECISE;MAPQ=31;MATEID=601925:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=11:92076576(-)-11:92094632(+)__11_92071001_92096001D;SPAN=18056;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:15:15.5:22.1,0,15.5:0:8:-22.25:22.25\n11\t92329739\t601999:1\tA\tA]Un_JTFH01000460v1_decoy:1678]\t33\tPASS\tEVDNC=ASSMB;HOMSEQ=TTTTTATTTAATAAGAGCTCTTTATTTTTAGGGA;MAPQ=60;MATEID=601999:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_11_92316001_92341001_4C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:11:8:3:33,3,0:11:0:-33.01:33.01\n11\t92329739\t601998:1\tA\t[Un_KN707678v1_decoy:1[A\t46\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=601998:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_92316001_92341001_7C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:16:8:4.2:46.2,4.2,0:16:0:-46.21:46.21\n11\t93288079\t602178:1\tT\tT[11:93288986[\t42\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=602178:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=11:93288079(+)-11:93288986(-)__11_93271501_93296501D;SPAN=907;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:14:1:3.9:42.9,3.9,0:0:14:-42.91:42.91\n11\t93288986\t602178:2\tA\t]11:93288079]A\t42\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=602178:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=11:93288079(+)-11:93288986(-)__11_93271501_93296501D;SPAN=907;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:14:1:3.9:42.9,3.9,0:0:14:-42.91:42.91\n11\t93946078\t602374:1\tT\tT[11:93948258[\t79\tPASS\tEVDNC=ASSMB;HOMSEQ=GCCTGTTGGATTCTT;MAPQ=60;MATEID=602374:2;MATENM=6;NM=6;NUMPARTS=2;SCTG=c_11_93933001_93958001_7C;SPAN=2180;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:26:20:7.2:79.2,7.2,0:26:0:-79.22:79.22\n11\t93948258\t602374:2\tG\t]11:93946078]G\t79\tPASS\tEVDNC=ASSMB;HOMSEQ=GCCTGTTGGATTCTT;MAPQ=60;MATEID=602374:1;MATENM=6;NM=6;NUMPARTS=2;SCTG=c_11_93933001_93958001_7C;SPAN=2180;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:26:20:7.2:79.2,7.2,0:26:0:-79.22:79.22\n11\t94734090\t602559:1\tT\t]11:94920235]T\t29\tPASS\tEVDNC=ASSMB;INSERTION=ATGAA;MAPQ=60;MATEID=602559:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_94913001_94938001_11C;SPAN=186145;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:13:2.9:29.3,0,2.9:10:0:-30.55:30.55\n11\t94893362\t602552:1\tC\tC[11:94897268[\t20\tPASS\tEVDNC=ASSMB;INSERTION=CAAA;MAPQ=60;MATEID=602552:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_94888501_94913501_5C;SPAN=3906;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:33:20.6:20.6,0,60.2:9:0:-20.43:21.63\n11\t94897268\t602552:2\tT\t]11:94893362]T\t20\tPASS\tEVDNC=ASSMB;INSERTION=CAAA;MAPQ=60;MATEID=602552:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_94888501_94913501_5C;SPAN=3906;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:33:20.6:20.6,0,60.2:9:0:-20.43:21.63\n11\t94920235\t602559:2\tA\tA[11:94734090[\t29\tPASS\tEVDNC=ASSMB;INSERTION=ATGAA;MAPQ=60;MATEID=602559:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_94913001_94938001_11C;SPAN=186145;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:13:2.9:29.3,0,2.9:10:0:-30.55:30.55\n11\t95633480\t602711:1\tG\tG]11:95634028]\t37\tPASS\tEVDNC=ASSMB;INSERTION=TATACTCAA;MAPQ=60;MATEID=602711:2;MATENM=2;NM=2;NUMPARTS=2;SCTG=c_11_95623501_95648501_10C;SPAN=548;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:20:11:37.4,0,11:13:0:-37.93:37.93\n11\t95634028\t602711:2\tA\tA]11:95633480]\t37\tPASS\tEVDNC=ASSMB;INSERTION=TATACTCAA;MAPQ=60;MATEID=602711:1;MATENM=2;NM=2;NUMPARTS=2;SCTG=c_11_95623501_95648501_10C;SPAN=548;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:20:11:37.4,0,11:13:0:-37.93:37.93\n11\t96004715\t602819:2\tT\t[1:106943617[T\t66\tPASS\tDISC_MAPQ=59;EVDNC=ASDIS;MAPQ=60;MATEID=602819:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_95991001_96016001_14C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:22:12:6:66,6,0:18:14:-66.02:66.02\n11\t99733408\t603835:2\tC\t[5:149173741[C\t42\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=G;MAPQ=60;MATEID=603835:1;MATENM=0;NM=13;NUMPARTS=2;SCTG=c_11_99715001_99740001_7C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:14:5:3.9:42.9,3.9,0:9:6:-42.91:42.91\n11\t99819848\t603886:1\tA\tA]11:99820649]\t81\tPASS\tDISC_MAPQ=58;EVDNC=DSCRD;IMPRECISE;MAPQ=58;MATEID=603886:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=11:99819848(+)-11:99820649(+)__11_99813001_99838001D;SPAN=801;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:28:39:15.5:81.5,0,15.5:0:28:-83.87:83.87\n11\t99820649\t603886:2\tA\tA]11:99819848]\t81\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=603886:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=11:99819848(+)-11:99820649(+)__11_99813001_99838001D;SPAN=801;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:28:39:15.5:81.5,0,15.5:0:28:-83.87:83.87\n11\t103330539\t385665:2\tA\t]7:32186402]A\t53\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;MAPQ=60;MATEID=385665:1;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_7_32168501_32193501_8C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:18:23:3.5:53,0,3.5:9:11:-55.29:55.29\n11\t104139755\t605101:1\tC\tC[11:104140090[\t99\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AATAAATAAC;MAPQ=60;MATEID=605101:2;MATENM=0;NM=5;NUMPARTS=2;SCTG=c_11_104125001_104150001_1C;SPAN=335;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:48:21:13.2:145.2,13.2,0:37:18:-145.2:145.2\n11\t104140090\t605101:2\tA\t]11:104139755]A\t99\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AATAAATAAC;MAPQ=60;MATEID=605101:1;MATENM=5;NM=0;NUMPARTS=2;SCTG=c_11_104125001_104150001_1C;SPAN=335;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:48:21:13.2:145.2,13.2,0:37:18:-145.2:145.2\n11\t104397023\t605173:1\tA\tA[11:104402502[\t69\tPASS\tEVDNC=ASSMB;HOMSEQ=ATA;MAPQ=60;MATEID=605173:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_104394501_104419501_2C;SPAN=5479;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:23:13:6.3:69.3,6.3,0:23:0:-69.32:69.32\n11\t104402502\t605173:2\tA\t]11:104397023]A\t69\tPASS\tEVDNC=ASSMB;HOMSEQ=ATA;MAPQ=60;MATEID=605173:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_104394501_104419501_2C;SPAN=5479;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:23:13:6.3:69.3,6.3,0:23:0:-69.32:69.32\n11\t104457529\t605189:1\tG\tG[11:104458049[\t27\tPASS\tEVDNC=ASSMB;INSERTION=AAATGG;MAPQ=60;MATEID=605189:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_11_104443501_104468501_0C;SPAN=520;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:19:17.9:27.8,0,17.9:10:0:-27.73:27.73\n11\t104458049\t605189:2\tC\t]11:104457529]C\t27\tPASS\tEVDNC=ASSMB;INSERTION=AAATGG;MAPQ=60;MATEID=605189:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_11_104443501_104468501_0C;SPAN=520;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:19:17.9:27.8,0,17.9:10:0:-27.73:27.73\n11\t106272375\t605556:1\tC\t[11:106273063[C\t66\tPASS\tDISC_MAPQ=0;EVDNC=TSI_L;HOMSEQ=AATAATAGTCTAATTTTCTCTTGGTAGTCCAGATCACTATCCCCAACCAACACTGTAACTCCCTTCTTAGACTGTTGAATCAGAGGCTTGAGGGACATAAAGTGTAAACATGTATAATATTATATATAATATATAATATAATTGT;INSERTION=AGGGACATAAAGTGTAAACATGTATAATATTATA;MAPQ=60;MATEID=605556:2;MATENM=2;NM=2;NUMPARTS=3;REPSEQ=GGG;SCTG=c_11_106256501_106281501_13C;SPAN=688;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:21:24:3.3:66,3.3,0:20:5:-67.03:67.03\n11\t106273063\t605556:2\tT\t[11:106272375[T\t66\tPASS\tDISC_MAPQ=60;EVDNC=TSI_L;HOMSEQ=AATAATAGTCTAATTTTCTCTTGGTAGTCCAGATCACTATCCCCAACCAACACTGTAACTCCCTTCTTAGACTGTTGAATCAGAGGCTTGAGGGACATAAAGTGTAAACATGTATAATATTATATATAATATATAATATAATTGT;INSERTION=AGGGACATAAAGTGTAAACATGTATAATATTATA;MAPQ=60;MATEID=605556:1;MATENM=2;NM=2;NUMPARTS=3;REPSEQ=GGG;SCTG=c_11_106256501_106281501_13C;SPAN=688;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:21:24:3.3:66,3.3,0:20:5:-67.03:67.03\n11\t107280913\t605801:1\tA\t[11:107298910[A\t23\tPASS\tDISC_MAPQ=30;EVDNC=DSCRD;IMPRECISE;MAPQ=30;MATEID=605801:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=11:107280913(-)-11:107298910(-)__11_107285501_107310501D;SPAN=17997;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:8:1:2.1:23.1,2.1,0:0:8:-23.11:23.11\n11\t107298910\t605801:2\tT\t[11:107280913[T\t23\tPASS\tDISC_MAPQ=46;EVDNC=DSCRD;IMPRECISE;MAPQ=46;MATEID=605801:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=11:107280913(-)-11:107298910(-)__11_107285501_107310501D;SPAN=17997;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:8:1:2.1:23.1,2.1,0:0:8:-23.11:23.11\n11\t117134598\t608060:1\tA\tA]11:117210072]\t56\tPASS\tDISC_MAPQ=58;EVDNC=DSCRD;IMPRECISE;MAPQ=58;MATEID=608060:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=11:117134598(+)-11:117210072(+)__11_117208001_117233001D;SPAN=75474;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:19:14:5.1:56.1,5.1,0:0:19:-56.11:56.11\n11\t117210072\t608060:2\tT\tT]11:117134598]\t56\tPASS\tDISC_MAPQ=56;EVDNC=DSCRD;IMPRECISE;MAPQ=56;MATEID=608060:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=11:117134598(+)-11:117210072(+)__11_117208001_117233001D;SPAN=75474;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:19:14:5.1:56.1,5.1,0:0:19:-56.11:56.11\n11\t117255064\t608067:2\tC\t[11:56497246[C\t41\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=C;MAPQ=60;MATEID=608067:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_117232501_117257501_23C;SPAN=60757818;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:18:1.7:41.3,0,1.7:8:11:-42.92:42.92\n11\t117515381\t608868:1\tT\t]11:119023562]T\t29\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;INSERTION=GAGACTAGCC;MAPQ=60;MATEID=608868:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_119021001_119046001_15C;SPAN=1508181;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:25:29.3:29.3,0,32.6:6:8:-29.28:29.3\n11\t118947887\t608808:1\tA\t]11:118948030]A\t33\tPASS\tEVDNC=ASSMB;HOMSEQ=AT;MAPQ=60;MATEID=608808:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_118947501_118972501_56C;SPAN=143;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:16:70:33.2:33.2,0,142.1:16:0:-33.14:37.03\n11\t118948030\t608808:2\tT\tT[11:118947887[\t33\tPASS\tEVDNC=ASSMB;HOMSEQ=AT;MAPQ=60;MATEID=608808:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_118947501_118972501_56C;SPAN=143;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:16:70:33.2:33.2,0,142.1:16:0:-33.14:37.03\n11\t119023562\t608868:2\tT\tT[11:117515381[\t29\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;INSERTION=GAGACTAGCC;MAPQ=60;MATEID=608868:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_119021001_119046001_15C;SPAN=1508181;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:25:29.3:29.3,0,32.6:6:8:-29.28:29.3\n11\t119253540\t608936:2\tC\t[11:73967021[C\t99\tPASS\tDISC_MAPQ=60;EVDNC=TSI_L;INSERTION=CATGCACCACCACACCCAGCTAA;MAPQ=60;MATEID=608936:1;MATENM=2;NM=0;NUMPARTS=3;REPSEQ=TTT;SCTG=c_11_119241501_119266501_36C;SPAN=45286519;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:41:15:11.4:125.4,11.4,0:37:7:-125.4:125.4\n11\t119486278\t609005:1\tA\tA[11:119486553[\t99\tPASS\tEVDNC=ASSMB;INSERTION=CCTCTGCCCCTCACCTCTGTCTCTGGGTCTTTGCCACCTGCCTCCTCCTTTCCTCCCTCCTGGACCTGCTTTCCCTCTCACTTGCTGAAGATGAGGCCCCACCACTCTTGCTTTGATGAAATCATCCATTTATGTGTTTAATCTTATAGTATTATATGCATTCTTTTACATGATTTCAAAATCTTTTGGCAGCAAAATATGCATAAATGACTGCTTATAGATGAATGCACGTGCACGTGTGTGTTTGGGGAGGGGGT;MAPQ=60;MATEID=609005:2;MATENM=6;NM=1;NUMPARTS=2;SCTG=c_11_119486501_119511501_30C;SPAN=275;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:61:14:16.8:184.8,16.8,0:61:0:-184.8:184.8\n11\t119486553\t609005:2\tG\t]11:119486278]G\t99\tPASS\tEVDNC=ASSMB;INSERTION=CCTCTGCCCCTCACCTCTGTCTCTGGGTCTTTGCCACCTGCCTCCTCCTTTCCTCCCTCCTGGACCTGCTTTCCCTCTCACTTGCTGAAGATGAGGCCCCACCACTCTTGCTTTGATGAAATCATCCATTTATGTGTTTAATCTTATAGTATTATATGCATTCTTTTACATGATTTCAAAATCTTTTGGCAGCAAAATATGCATAAATGACTGCTTATAGATGAATGCACGTGCACGTGTGTGTTTGGGGAGGGGGT;MAPQ=60;MATEID=609005:1;MATENM=1;NM=6;NUMPARTS=2;SCTG=c_11_119486501_119511501_30C;SPAN=275;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:61:14:16.8:184.8,16.8,0:61:0:-184.8:184.8\n11\t128967524\t611508:1\tG\t]11:129745642]G\t72\tPASS\tEVDNC=ASSMB;HOMSEQ=GA;MAPQ=60;MATEID=611508:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_129727501_129752501_2C;SPAN=778118;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:24:24:6.6:72.6,6.6,0:24:0:-72.62:72.62\n11\t129051675\t611288:2\tG\t[3:128657391[G\t17\tPASS\tDISC_MAPQ=17;EVDNC=ASDIS;HOMSEQ=GGCTGGG;MAPQ=60;MATEID=611288:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_11_129041501_129066501_11C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:7:19:17.9:17.9,0,27.8:4:3:-17.77:17.94\n11\t129745642\t611508:2\tA\tA[11:128967524[\t72\tPASS\tEVDNC=ASSMB;HOMSEQ=GA;MAPQ=60;MATEID=611508:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_129727501_129752501_2C;SPAN=778118;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:24:24:6.6:72.6,6.6,0:24:0:-72.62:72.62\n11\t134934947\t612620:1\tT\tT[11:134936118[\t52\tPASS\tDISC_MAPQ=38;EVDNC=DSCRD;IMPRECISE;MAPQ=38;MATEID=612620:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=11:134934947(+)-11:134936118(-)__11_134921501_134946501D;SPAN=1171;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:18:11:4.8:52.8,4.8,0:0:18:-52.81:52.81\n11\t134936118\t612620:2\tC\t]11:134934947]C\t52\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=612620:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=11:134934947(+)-11:134936118(-)__11_134921501_134946501D;SPAN=1171;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:18:11:4.8:52.8,4.8,0:0:18:-52.81:52.81\n12\t520552\t612793:1\tT\t]12:520645]T\t50\tPASS\tEVDNC=ASSMB;HOMSEQ=TG;MAPQ=60;MATEID=612793:2;MATENM=2;NM=1;NUMPARTS=2;SCTG=c_12_514501_539501_7C;SPAN=93;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:18:33:30.5:50.3,0,30.5:18:0:-50.33:50.33\n12\t520645\t612793:2\tG\tG[12:520552[\t50\tPASS\tEVDNC=ASSMB;HOMSEQ=TG;MAPQ=60;MATEID=612793:1;MATENM=1;NM=2;NUMPARTS=2;SCTG=c_12_514501_539501_7C;SPAN=93;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:18:33:30.5:50.3,0,30.5:18:0:-50.33:50.33\n12\t6429248\t614235:1\tG\tG[12:6429610[\t42\tPASS\tDISC_MAPQ=58;EVDNC=ASDIS;HOMSEQ=GCCCGCCTCGGCCTCCCAAAGTGCTGG;MAPQ=60;MATEID=614235:2;MATENM=0;NM=4;NUMPARTS=2;SCTG=c_12_6419001_6444001_4C;SPAN=362;SUBN=4;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:14:5:3.9:42.9,3.9,0:10:5:-42.91:42.91\n12\t6429610\t614235:2\tG\t]12:6429248]G\t42\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=GCCCGCCTCGGCCTCCCAAAGTGCTGG;MAPQ=60;MATEID=614235:1;MATENM=4;NM=0;NUMPARTS=2;SCTG=c_12_6419001_6444001_4C;SPAN=362;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:14:5:3.9:42.9,3.9,0:10:5:-42.91:42.91\n12\t7083306\t614416:1\tT\t]12:7083723]T\t46\tPASS\tDISC_MAPQ=37;EVDNC=DSCRD;IMPRECISE;MAPQ=37;MATEID=614416:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=12:7083306(-)-12:7083723(+)__12_7080501_7105501D;SPAN=417;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:15:15:4.2:46.2,4.2,0:0:15:-46.21:46.21\n12\t7083723\t614416:2\tN\tN[12:7083306[\t46\tPASS\tDISC_MAPQ=53;EVDNC=DSCRD;IMPRECISE;MAPQ=53;MATEID=614416:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=12:7083306(-)-12:7083723(+)__12_7080501_7105501D;SPAN=417;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:15:15:4.2:46.2,4.2,0:0:15:-46.21:46.21\n12\t7677446\t614599:1\tT\t[18:46441888[T\t33\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;INSERTION=GGCCC;MAPQ=60;MATEID=614599:2;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_12_7668501_7693501_2C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:11:8:3:33,3,0:9:6:-33.01:33.01\n12\t8307812\t189995:2\tT\t]3:130167162]T\t23\tPASS\tDISC_MAPQ=23;EVDNC=DSCRD;IMPRECISE;MAPQ=23;MATEID=189995:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=3:130167162(+)-12:8307812(-)__3_130144001_130169001D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:8:5:2.1:23.1,2.1,0:0:8:-23.11:23.11\n12\t8308047\t614848:2\tT\tT[3:130167390[\t22\tPASS\tDISC_MAPQ=35;EVDNC=DSCRD;IMPRECISE;MAPQ=35;MATEID=614848:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=3:130167390(-)-12:8308047(+)__12_8305501_8330501D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:14:12.5:22.4,0,12.5:0:8:-22.62:22.62\n12\t8864256\t615005:1\tT\tT[12:8865272[\t62\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=GCTCATGCCTGT;MAPQ=60;MATEID=615005:2;MATENM=6;NM=25;NUMPARTS=2;SCTG=c_12_8844501_8869501_10C;SPAN=1016;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:21:5:5.7:62.7,5.7,0:15:9:-62.72:62.72\n12\t8865272\t615005:2\tG\t]12:8864256]G\t62\tPASS\tDISC_MAPQ=49;EVDNC=ASDIS;HOMSEQ=GCTCATGCCTGT;MAPQ=60;MATEID=615005:1;MATENM=25;NM=6;NUMPARTS=2;SCTG=c_12_8844501_8869501_10C;SPAN=1016;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:21:5:5.7:62.7,5.7,0:15:9:-62.72:62.72\n12\t9319621\t615195:1\tG\tG]12:9412218]\t29\tPASS\tDISC_MAPQ=58;EVDNC=DSCRD;IMPRECISE;MAPQ=58;MATEID=615195:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=12:9319621(+)-12:9412218(+)__12_9408001_9433001D;SPAN=92597;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:9:10:2.7:29.7,2.7,0:0:9:-29.08:29.08\n12\t9405219\t615188:1\tT\tT[12:9406080[\t56\tPASS\tDISC_MAPQ=56;EVDNC=DSCRD;IMPRECISE;MAPQ=56;MATEID=615188:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=12:9405219(+)-12:9406080(-)__12_9383501_9408501D;SPAN=861;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:19:8:5.1:56.1,5.1,0:0:19:-56.11:56.11\n12\t9406080\t615188:2\tC\t]12:9405219]C\t56\tPASS\tDISC_MAPQ=52;EVDNC=DSCRD;IMPRECISE;MAPQ=52;MATEID=615188:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=12:9405219(+)-12:9406080(-)__12_9383501_9408501D;SPAN=861;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:19:8:5.1:56.1,5.1,0:0:19:-56.11:56.11\n12\t9412218\t615195:2\tT\tT]12:9319621]\t29\tPASS\tDISC_MAPQ=56;EVDNC=DSCRD;IMPRECISE;MAPQ=56;MATEID=615195:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=12:9319621(+)-12:9412218(+)__12_9408001_9433001D;SPAN=92597;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:9:10:2.7:29.7,2.7,0:0:9:-29.08:29.08\n12\t9480168\t620653:1\tG\tG]12:31201038]\t26\tPASS\tDISC_MAPQ=22;EVDNC=DSCRD;IMPRECISE;MAPQ=22;MATEID=620653:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=12:9480168(+)-12:31201038(+)__12_31188501_31213501D;SPAN=21720870;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:13:6.2:26,0,6.2:0:9:-26.69:26.69\n12\t12653308\t616055:1\tG\t[Un_KN707783v1_decoy:1[G\t42\tPASS\tEVDNC=ASSMB;HOMSEQ=GGCATGGTGGCTCACGCCTGTA;MAPQ=60;MATEID=616055:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_12_12642001_12667001_21C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:14:8:3.9:42.9,3.9,0:14:0:-42.91:42.91\n12\t14323917\t616477:1\tT\t]X:38199383]T\t36\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TTCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGAGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCACGCCACTGCACTCCAGCCTGGG;MAPQ=60;MATEID=616477:2;MATENM=6;NM=4;NUMPARTS=2;SCTG=c_12_14308001_14333001_21C;SPAN=-1;SUBN=1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:12:7:3.3:36.3,3.3,0:6:7:-36.31:36.31\n12\t17463563\t617131:1\tA\tA[12:17464684[\t52\tPASS\tDISC_MAPQ=58;EVDNC=DSCRD;IMPRECISE;MAPQ=58;MATEID=617131:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=12:17463563(+)-12:17464684(-)__12_17444001_17469001D;SPAN=1121;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:18:3:4.8:52.8,4.8,0:0:18:-52.81:52.81\n12\t17464684\t617131:2\tC\t]12:17463563]C\t52\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=617131:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=12:17463563(+)-12:17464684(-)__12_17444001_17469001D;SPAN=1121;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:18:3:4.8:52.8,4.8,0:0:18:-52.81:52.81\n12\t25803192\t619289:1\tG\t[12:125316601[G\t52\tPASS\tDISC_MAPQ=44;EVDNC=DSCRD;IMPRECISE;MAPQ=44;MATEID=619289:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=12:25803192(-)-12:125316601(-)__12_25798501_25823501D;SPAN=99513409;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:18:10:4.8:52.8,4.8,0:0:18:-52.81:52.81\n12\t28908761\t620046:1\tA\t]12:28908886]A\t72\tPASS\tEVDNC=ASSMB;INSERTION=A;MAPQ=60;MATEID=620046:2;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_12_28885501_28910501_8C;SPAN=125;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:25:37:19.4:72.2,0,19.4:25:0:-73.68:73.68\n12\t28908886\t620046:2\tT\tT[12:28908761[\t72\tPASS\tEVDNC=ASSMB;INSERTION=A;MAPQ=60;MATEID=620046:1;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_12_28885501_28910501_8C;SPAN=125;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:25:37:19.4:72.2,0,19.4:25:0:-73.68:73.68\n12\t30591611\t620496:1\tT\tT[12:30593306[\t23\tPASS\tEVDNC=ASSMB;INSERTION=CC;MAPQ=60;MATEID=620496:2;MATENM=2;NM=3;NUMPARTS=2;SCTG=c_12_30576001_30601001_5C;SPAN=1695;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:8:3:2.1:23.1,2.1,0:8:0:-23.11:23.11\n12\t30593306\t620496:2\tA\t]12:30591611]A\t23\tPASS\tEVDNC=ASSMB;INSERTION=CC;MAPQ=60;MATEID=620496:1;MATENM=3;NM=2;NUMPARTS=2;SCTG=c_12_30576001_30601001_5C;SPAN=1695;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:8:3:2.1:23.1,2.1,0:8:0:-23.11:23.11\n12\t31201038\t620653:2\tA\tA]12:9480168]\t26\tPASS\tDISC_MAPQ=58;EVDNC=DSCRD;IMPRECISE;MAPQ=58;MATEID=620653:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=12:9480168(+)-12:31201038(+)__12_31188501_31213501D;SPAN=21720870;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:13:6.2:26,0,6.2:0:9:-26.69:26.69\n12\t32891138\t621190:1\tA\t[12:32906808[A\t49\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;INSERTION=A;MAPQ=60;MATEID=621190:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_32903501_32928501_118C;SPAN=15670;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:17:24:9.8:49.4,0,9.8:13:6:-50.74:50.74\n12\t32906808\t621190:2\tA\t[12:32891138[A\t49\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;INSERTION=A;MAPQ=60;MATEID=621190:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_32903501_32928501_118C;SPAN=15670;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:17:24:9.8:49.4,0,9.8:13:6:-50.74:50.74\n12\t33009535\t621284:1\tC\t[12:33119661[C\t72\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=CT;MAPQ=60;MATEID=621284:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_33099501_33124501_61C;SPAN=110126;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:24:28:1.2:72.6,1.2,0:16:12:-76:76\n12\t33118851\t626174:1\tA\tA]12:45341570]\t36\tPASS\tDISC_MAPQ=59;EVDNC=DSCRD;IMPRECISE;MAPQ=59;MATEID=626174:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=12:33118851(+)-12:45341570(+)__12_45325001_45350001D;SPAN=12222719;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:12:11:3.3:36.3,3.3,0:0:12:-36.31:36.31\n12\t33119661\t621284:2\tA\t[12:33009535[A\t72\tPASS\tDISC_MAPQ=58;EVDNC=ASDIS;HOMSEQ=CT;MAPQ=60;MATEID=621284:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_33099501_33124501_61C;SPAN=110126;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:24:28:1.2:72.6,1.2,0:16:12:-76:76\n12\t33574300\t621458:1\tC\tC[12:33574572[\t10\tPASS\tEVDNC=ASSMB;HOMSEQ=GGGTGGC;MAPQ=60;MATEID=621458:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_33565001_33590001_95C;SPAN=272;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:7:47:10.1:10.1,0,105.8:7:0:-9.896:14.75\n12\t33574572\t621458:2\tG\t]12:33574300]G\t10\tPASS\tEVDNC=ASSMB;HOMSEQ=GGGTGGC;MAPQ=60;MATEID=621458:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_33565001_33590001_95C;SPAN=272;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:7:47:10.1:10.1,0,105.8:7:0:-9.896:14.75\n12\t33700205\t621491:1\tA\tA[12:33700420[\t64\tPASS\tEVDNC=ASSMB;HOMSEQ=A;MAPQ=60;MATEID=621491:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_12_33687501_33712501_40C;SPAN=215;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:22:29:8.3:64.4,0,8.3:22:0:-66.94:66.94\n12\t33700420\t621491:2\tA\t]12:33700205]A\t64\tPASS\tEVDNC=ASSMB;HOMSEQ=A;MAPQ=60;MATEID=621491:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_12_33687501_33712501_40C;SPAN=215;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:22:29:8.3:64.4,0,8.3:22:0:-66.94:66.94\n12\t33864471\t669322:1\tG\tG]13:48282773]\t23\tPASS\tDISC_MAPQ=59;EVDNC=DSCRD;IMPRECISE;MAPQ=59;MATEID=669322:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=12:33864471(+)-13:48282773(+)__13_48265001_48290001D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:11:3.5:23.3,0,3.5:0:8:-24.05:24.05\n12\t33946461\t621610:1\tA\tA[12:33952570[\t29\tPASS\tDISC_MAPQ=59;EVDNC=ASDIS;INSERTION=G;MAPQ=60;MATEID=621610:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_12_33932501_33957501_126C;SPAN=6109;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:36:29.6:29.6,0,59.3:6:9:-29.49:30.1\n12\t33946492\t630191:1\tG\t[12:59699013[G\t66\tPASS\tDISC_MAPQ=57;EVDNC=ASDIS;HOMSEQ=G;MAPQ=60;MATEID=630191:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_59682001_59707001_18C;SPAN=25752521;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:22:16:6:66,6,0:19:8:-66.02:66.02\n12\t33947951\t627288:1\tA\tA[12:49261288[\t33\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=627288:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_49245001_49270001_33C;SPAN=15313337;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:11:13:0.3:33,0.3,0:11:0:-34.67:34.67\n12\t33952570\t621610:2\tA\t]12:33946461]A\t29\tPASS\tDISC_MAPQ=59;EVDNC=ASDIS;INSERTION=G;MAPQ=60;MATEID=621610:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_12_33932501_33957501_126C;SPAN=6109;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:36:29.6:29.6,0,59.3:6:9:-29.49:30.1\n12\t34680752\t621866:1\tT\t]12:34681291]T\t8\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TATGGTAGAAAAGGAAATATCTTCATA;MAPQ=0;MATEID=621866:2;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_12_34667501_34692501_97C;SPAN=539;SUBN=5;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:75:8.6:8.6,0,180.2:3:6:-8.627:18.06\n12\t34681291\t621866:2\tA\tA[12:34680752[\t8\tPASS\tDISC_MAPQ=54;EVDNC=ASDIS;HOMSEQ=TATGGTAGAAAAGGAAATATCTTCATA;MAPQ=48;MATEID=621866:1;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_12_34667501_34692501_97C;SPAN=539;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:75:8.6:8.6,0,180.2:3:6:-8.627:18.06\n12\t34692129\t621876:1\tT\tT[12:34696203[\t36\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=CTTTGTGATGTGTGCATTCAACTCACAGAGTTTAACCTT;MAPQ=60;MATEID=621876:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_12_34667501_34692501_252C;SPAN=4074;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:12:12:3.3:36.3,3.3,0:8:7:-36.31:36.31\n12\t34696203\t621876:2\tC\t]12:34692129]C\t36\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=CTTTGTGATGTGTGCATTCAACTCACAGAGTTTAACCTT;MAPQ=60;MATEID=621876:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_12_34667501_34692501_252C;SPAN=4074;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:12:12:3.3:36.3,3.3,0:8:7:-36.31:36.31\n12\t34775495\t621965:1\tT\t]12:34802522]T\t99\tPASS\tDISC_MAPQ=23;EVDNC=ASDIS;HOMSEQ=TATCTTCGTATAAAAACTAGACAGAATCATTCT;MAPQ=51;MATEID=621965:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_12_34790001_34815001_170C;SPAN=27027;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:39:7:10.8:118.8,10.8,0:36:3:-118.8:118.8\n12\t34797611\t621973:1\tT\tT[12:34804209[\t31\tPASS\tDISC_MAPQ=39;EVDNC=DSCRD;IMPRECISE;MAPQ=39;MATEID=621973:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=12:34797611(+)-12:34804209(-)__12_34790001_34815001D;SPAN=6598;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:28:31.7:31.7,0,38.3:0:12:-31.74:31.78\n12\t34802522\t621965:2\tT\tT[12:34775495[\t99\tPASS\tDISC_MAPQ=19;EVDNC=ASDIS;HOMSEQ=TATCTTCGTATAAAAACTAGACAGAATCATTCT;MAPQ=60;MATEID=621965:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_12_34790001_34815001_170C;SPAN=27027;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:39:7:10.8:118.8,10.8,0:36:3:-118.8:118.8\n12\t34804209\t621973:2\tC\t]12:34797611]C\t31\tPASS\tDISC_MAPQ=44;EVDNC=DSCRD;IMPRECISE;MAPQ=44;MATEID=621973:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=12:34797611(+)-12:34804209(-)__12_34790001_34815001D;SPAN=6598;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:28:31.7:31.7,0,38.3:0:12:-31.74:31.78\n12\t35065508\t622080:1\tG\tG[12:36036026[\t69\tPASS\tDISC_MAPQ=44;EVDNC=DSCRD;IMPRECISE;MAPQ=44;MATEID=622080:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=12:35065508(+)-12:36036026(-)__12_35059501_35084501D;SPAN=970518;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:23:5:6.3:69.3,6.3,0:0:23:-69.32:69.32\n12\t35279799\t622381:1\tG\tG[12:36171543[\t23\tPASS\tDISC_MAPQ=25;EVDNC=DSCRD;IMPRECISE;MAPQ=25;MATEID=622381:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=12:35279799(+)-12:36171543(-)__12_36162001_36187001D;SPAN=891744;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:11:3.5:23.3,0,3.5:0:8:-24.05:24.05\n12\t35320953\t622592:1\tG\tG[12:36636654[\t46\tPASS\tDISC_MAPQ=33;EVDNC=DSCRD;IMPRECISE;MAPQ=33;MATEID=622592:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=12:35320953(+)-12:36636654(-)__12_36627501_36652501D;SPAN=1315701;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:16:5:4.2:46.2,4.2,0:0:16:-46.21:46.21\n12\t35482224\t622730:1\tA\tA[12:37010815[\t36\tPASS\tDISC_MAPQ=17;EVDNC=DSCRD;IMPRECISE;MAPQ=17;MATEID=622730:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=12:35482224(+)-12:37010815(-)__12_36995001_37020001D;SPAN=1528591;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:12:14:0.6:36.3,0.6,0:0:12:-38:38\n12\t35633983\t622566:1\tT\tT[12:36580436[\t22\tPASS\tDISC_MAPQ=19;EVDNC=DSCRD;IMPRECISE;MAPQ=19;MATEID=622566:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=12:35633983(+)-12:36580436(-)__12_36578501_36603501D;SPAN=946453;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:16:15.5:22.1,0,15.5:0:8:-21.93:21.93\n12\t36036026\t622080:2\tC\t]12:35065508]C\t69\tPASS\tDISC_MAPQ=50;EVDNC=DSCRD;IMPRECISE;MAPQ=50;MATEID=622080:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=12:35065508(+)-12:36036026(-)__12_35059501_35084501D;SPAN=970518;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:23:5:6.3:69.3,6.3,0:0:23:-69.32:69.32\n12\t36146423\t622547:1\tA\t]12:36542570]A\t34\tPASS\tDISC_MAPQ=20;EVDNC=DSCRD;IMPRECISE;MAPQ=20;MATEID=622547:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=12:36146423(-)-12:36542570(+)__12_36529501_36554501D;SPAN=396147;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:31:34.4:34.4,0,41:0:13:-34.2:34.27\n12\t36170378\t622749:1\tT\t]12:37023657]T\t39\tPASS\tDISC_MAPQ=15;EVDNC=DSCRD;IMPRECISE;MAPQ=15;MATEID=622749:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=12:36170378(-)-12:37023657(+)__12_37019501_37044501D;SPAN=853279;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:13:3:3.6:39.6,3.6,0:0:13:-39.61:39.61\n12\t36171543\t622381:2\tA\t]12:35279799]A\t23\tPASS\tDISC_MAPQ=18;EVDNC=DSCRD;IMPRECISE;MAPQ=18;MATEID=622381:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=12:35279799(+)-12:36171543(-)__12_36162001_36187001D;SPAN=891744;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:11:3.5:23.3,0,3.5:0:8:-24.05:24.05\n12\t36386608\t622795:1\tA\t]12:37141680]A\t42\tPASS\tDISC_MAPQ=22;EVDNC=DSCRD;IMPRECISE;MAPQ=22;MATEID=622795:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=12:36386608(-)-12:37141680(+)__12_37117501_37142501D;SPAN=755072;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:14:5:3.9:42.9,3.9,0:0:14:-42.91:42.91\n12\t36542570\t622547:2\tA\tA[12:36146423[\t34\tPASS\tDISC_MAPQ=16;EVDNC=DSCRD;IMPRECISE;MAPQ=16;MATEID=622547:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=12:36146423(-)-12:36542570(+)__12_36529501_36554501D;SPAN=396147;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:31:34.4:34.4,0,41:0:13:-34.2:34.27\n12\t36580436\t622566:2\tA\t]12:35633983]A\t22\tPASS\tDISC_MAPQ=26;EVDNC=DSCRD;IMPRECISE;MAPQ=26;MATEID=622566:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=12:35633983(+)-12:36580436(-)__12_36578501_36603501D;SPAN=946453;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:16:15.5:22.1,0,15.5:0:8:-21.93:21.93\n12\t36636654\t622592:2\tC\t]12:35320953]C\t46\tPASS\tDISC_MAPQ=16;EVDNC=DSCRD;IMPRECISE;MAPQ=16;MATEID=622592:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=12:35320953(+)-12:36636654(-)__12_36627501_36652501D;SPAN=1315701;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:16:5:4.2:46.2,4.2,0:0:16:-46.21:46.21\n12\t37010815\t622730:2\tT\t]12:35482224]T\t36\tPASS\tDISC_MAPQ=30;EVDNC=DSCRD;IMPRECISE;MAPQ=30;MATEID=622730:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=12:35482224(+)-12:37010815(-)__12_36995001_37020001D;SPAN=1528591;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:12:14:0.6:36.3,0.6,0:0:12:-38:38\n12\t37023657\t622749:2\tA\tA[12:36170378[\t39\tPASS\tDISC_MAPQ=16;EVDNC=DSCRD;IMPRECISE;MAPQ=16;MATEID=622749:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=12:36170378(-)-12:37023657(+)__12_37019501_37044501D;SPAN=853279;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:13:3:3.6:39.6,3.6,0:0:13:-39.61:39.61\n12\t37141680\t622795:2\tA\tA[12:36386608[\t42\tPASS\tDISC_MAPQ=22;EVDNC=DSCRD;IMPRECISE;MAPQ=22;MATEID=622795:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=12:36386608(-)-12:37141680(+)__12_37117501_37142501D;SPAN=755072;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:14:5:3.9:42.9,3.9,0:0:14:-42.91:42.91\n12\t37253832\t622864:1\tC\t]12:37255340]C\t37\tPASS\tDISC_MAPQ=44;EVDNC=DSCRD;IMPRECISE;MAPQ=44;MATEID=622864:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=12:37253832(-)-12:37255340(+)__12_37240001_37265001D;SPAN=1508;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:19:8:37.7,0,8:0:13:-38.44:38.44\n12\t37255340\t622864:2\tN\tN[12:37253832[\t37\tPASS\tDISC_MAPQ=33;EVDNC=DSCRD;IMPRECISE;MAPQ=33;MATEID=622864:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=12:37253832(-)-12:37255340(+)__12_37240001_37265001D;SPAN=1508;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:19:8:37.7,0,8:0:13:-38.44:38.44\n12\t37258962\t622868:1\tA\t]12:37261422]A\t13\tPASS\tDISC_MAPQ=36;EVDNC=DSCRD;IMPRECISE;MAPQ=36;MATEID=622868:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=12:37258962(-)-12:37261422(+)__12_37240001_37265001D;SPAN=2460;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:47:13.4:13.4,0,102.5:0:8:-13.2:17.36\n12\t37261422\t622868:2\tG\tG[12:37258962[\t13\tPASS\tDISC_MAPQ=50;EVDNC=DSCRD;IMPRECISE;MAPQ=50;MATEID=622868:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=12:37258962(-)-12:37261422(+)__12_37240001_37265001D;SPAN=2460;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:47:13.4:13.4,0,102.5:0:8:-13.2:17.36\n12\t37333223\t623069:1\tN\tN[12:37334767[\t99\tPASS\tDISC_MAPQ=60;EVDNC=TSI_G;HOMSEQ=CTTTTGATAGAGCAGTTTTGAAACACTGCTTTTGTAGAATCTGCTTGTGGATATACGGAACTGTTTGAGGAATTCGTTGTAAACGCAATATCTTCACATGCAAACTAGACGGAAGCATTCTCAGAAACTTCTTTGTGATGTGTACATTGAACGCACAGACTTGAACATTCCTTTTGAG;INSERTION=AGAGCAGTTTCGAAACAGTGTTTTTATAGTATCTGCAAGAGGATATGTGGAACGTTTTGAGGCCTATGATGGAAAAGGAAATATCTTCACATAAATACTAGATAGAAGCATTCTCACCAACTGCTTTGTGGTGTACGCATTCATCTGACAGAGTGGAACCCTTCTTTTGATAGAGCAGTTTTGAAACACACTTTTTGTAGAATCTGCAAGTGTTCAGTTAGAGCACTTTGAGGCCTATGTTGGAAAAAGAAAT;MAPQ=60;MATEID=623069:2;MATENM=1;NM=1;NUMPARTS=3;SCTG=c_12_37313501_37338501_237C;SECONDARY;SPAN=1544;SUBN=8;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:48:11:13.2:145.2,13.2,0:46:5:-145.2:145.2\n12\t37334767\t623069:2\tN\t]12:37333223]N\t99\tPASS\tDISC_MAPQ=52;EVDNC=TSI_G;HOMSEQ=CTTTTGATAGAGCAGTTTTGAAACACTGCTTTTGTAGAATCTGCTTGTGGATATACGGAACTGTTTGAGGAATTCGTTGTAAACGCAATATCTTCACATGCAAACTAGACGGAAGCATTCTCAGAAACTTCTTTGTGATGTGTACATTGAACGCACAGACTTGAACATTCCTTTTGAG;INSERTION=AGAGCAGTTTCGAAACAGTGTTTTTATAGTATCTGCAAGAGGATATGTGGAACGTTTTGAGGCCTATGATGGAAAAGGAAATATCTTCACATAAATACTAGATAGAAGCATTCTCACCAACTGCTTTGTGGTGTACGCATTCATCTGACAGAGTGGAACCCTTCTTTTGATAGAGCAGTTTTGAAACACACTTTTTGTAGAATCTGCAAGTGTTCAGTTAGAGCACTTTGAGGCCTATGTTGGAAAAAGAAAT;MAPQ=60;MATEID=623069:1;MATENM=1;NM=1;NUMPARTS=3;SCTG=c_12_37313501_37338501_237C;SECONDARY;SPAN=1544;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:48:11:13.2:145.2,13.2,0:46:5:-145.2:145.2\n12\t37365284\t623185:1\tA\tA[12:37367892[\t44\tPASS\tDISC_MAPQ=58;EVDNC=DSCRD;IMPRECISE;MAPQ=58;MATEID=623185:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=12:37365284(+)-12:37367892(-)__12_37362501_37387501D;SPAN=2608;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:15:19:1.4:44.3,0,1.4:0:15:-46.2:46.2\n12\t37367892\t623185:2\tT\t]12:37365284]T\t44\tPASS\tDISC_MAPQ=56;EVDNC=DSCRD;IMPRECISE;MAPQ=56;MATEID=623185:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=12:37365284(+)-12:37367892(-)__12_37362501_37387501D;SPAN=2608;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:15:19:1.4:44.3,0,1.4:0:15:-46.2:46.2\n12\t37597426\t623343:1\tT\tT[12:37600816[\t40\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AGAGCAGTTTTGAAACACT;MAPQ=60;MATEID=623343:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_12_37583001_37608001_116C;SPAN=3390;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:21:10.7:40.4,0,10.7:9:5:-41.11:41.11\n12\t37600816\t623343:2\tA\t]12:37597426]A\t40\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AGAGCAGTTTTGAAACACT;MAPQ=60;MATEID=623343:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_12_37583001_37608001_116C;SPAN=3390;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:21:10.7:40.4,0,10.7:9:5:-41.11:41.11\n12\t37616372\t623373:1\tT\tT[12:37624294[\t33\tPASS\tDISC_MAPQ=54;EVDNC=ASDIS;HOMSEQ=AAGTGGATATTTGGAATGCTTTGAGGCCT;MAPQ=0;MATEID=623373:2;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_12_37607501_37632501_47C;SPAN=7922;SUBN=8;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:34:33.5:33.5,0,50:6:10:-33.36:33.58\n12\t37624294\t623373:2\tA\t]12:37616372]A\t33\tPASS\tDISC_MAPQ=58;EVDNC=ASDIS;HOMSEQ=AAGTGGATATTTGGAATGCTTTGAGGCCT;MAPQ=60;MATEID=623373:1;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_12_37607501_37632501_47C;SPAN=7922;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:34:33.5:33.5,0,50:6:10:-33.36:33.58\n12\t37828951\t623821:1\tG\t]12:37833257]G\t99\tPASS\tDISC_MAPQ=59;EVDNC=DSCRD;IMPRECISE;MAPQ=59;MATEID=623821:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=12:37828951(-)-12:37833257(+)__12_37828001_37853001D;SPAN=4306;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:57:55:15.9:174.9,15.9,0:0:57:-174.9:174.9\n12\t37833257\t623821:2\tG\tG[12:37828951[\t99\tPASS\tDISC_MAPQ=59;EVDNC=DSCRD;IMPRECISE;MAPQ=59;MATEID=623821:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=12:37828951(-)-12:37833257(+)__12_37828001_37853001D;SPAN=4306;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:57:55:15.9:174.9,15.9,0:0:57:-174.9:174.9\n12\t37924184\t623856:1\tT\t[12:37924724[T\t38\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TA;MAPQ=60;MATEID=623856:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_12_37901501_37926501_41C;SPAN=540;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:15:41:38:38,0,64.4:12:10:-37.99:38.38\n12\t37924724\t623856:2\tT\t[12:37924184[T\t38\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TA;MAPQ=60;MATEID=623856:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_12_37901501_37926501_41C;SPAN=540;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:15:41:38:38,0,64.4:12:10:-37.99:38.38\n12\t39152300\t926030:1\tC\t[X:11714300[C\t14\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;INSERTION=GTTAGCAGC;MAPQ=60;MATEID=926030:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_23_11711001_11736001_27C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:6:21:14:14,0,37.1:3:6:-13.9:14.56\n12\t39714095\t624468:1\tA\t]12:39714154]A\t46\tPASS\tEVDNC=ASSMB;INSERTION=GTATGTATACGTGTATATGTATATATGTACATACGTATAT;MAPQ=60;MATEID=624468:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_39690001_39715001_31C;SPAN=59;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:17:36:42.8:46.1,0,42.8:17:0:-46:46\n12\t39714154\t624468:2\tC\tC[12:39714095[\t46\tPASS\tEVDNC=ASSMB;INSERTION=GTATGTATACGTGTATATGTATATATGTACATACGTATAT;MAPQ=60;MATEID=624468:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_39690001_39715001_31C;SPAN=59;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:17:36:42.8:46.1,0,42.8:17:0:-46:46\n12\t39761555\t624525:1\tT\t]12:39850525]T\t46\tPASS\tDISC_MAPQ=56;EVDNC=ASDIS;INSERTION=TTAATTAATTGCTATATATGACTAATTAAGATATA;MAPQ=60;MATEID=624525:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_12_39837001_39862001_14C;SPAN=88970;SUBN=3;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:16:16:4.2:46.2,4.2,0:11:7:-46.21:46.21\n12\t39850525\t624525:2\tA\tA[12:39761555[\t46\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;INSERTION=TTAATTAATTGCTATATATGACTAATTAAGATATA;MAPQ=60;MATEID=624525:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_12_39837001_39862001_14C;SPAN=88970;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:16:16:4.2:46.2,4.2,0:11:7:-46.21:46.21\n12\t39931333\t624573:1\tA\tA[12:40006564[\t52\tPASS\tEVDNC=ASSMB;INSERTION=TGCCTAATGCCTGCTACTAAATGCCTACTACTAATGCCTGCTACTAATGCCTGCTAC;MAPQ=60;MATEID=624573:2;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_12_39984001_40009001_12C;SPAN=75231;SUBN=3;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:18:15:4.8:52.8,4.8,0:18:0:-52.81:52.81\n12\t40006564\t624573:2\tT\t]12:39931333]T\t52\tPASS\tEVDNC=ASSMB;INSERTION=TGCCTAATGCCTGCTACTAAATGCCTACTACTAATGCCTGCTACTAATGCCTGCTAC;MAPQ=60;MATEID=624573:1;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_12_39984001_40009001_12C;SPAN=75231;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:18:15:4.8:52.8,4.8,0:18:0:-52.81:52.81\n12\t40480965\t624749:1\tA\tA[12:40482623[\t44\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;INSERTION=GCTGGAGTGA;MAPQ=16;MATEID=624749:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_12_40474001_40499001_228C;SPAN=1658;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:17:41:44.6:44.6,0,57.8:6:14:-44.59:44.7\n12\t40482173\t624751:1\tC\t]12:40485152]C\t34\tPASS\tEVDNC=ASSMB;HOMSEQ=CAGGAACAACTGGATT;MAPQ=60;MATEID=624751:2;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_12_40474001_40499001_66C;SPAN=2979;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:32:34.1:34.1,0,44:13:0:-33.92:34.03\n12\t40482623\t624749:2\tC\t]12:40480965]C\t44\tPASS\tDISC_MAPQ=50;EVDNC=ASDIS;INSERTION=GCTGGAGTGA;MAPQ=60;MATEID=624749:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_12_40474001_40499001_228C;SPAN=1658;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:17:41:44.6:44.6,0,57.8:6:14:-44.59:44.7\n12\t40485152\t624751:2\tT\tT[12:40482173[\t34\tPASS\tEVDNC=ASSMB;HOMSEQ=CAGGAACAACTGGATT;MAPQ=60;MATEID=624751:1;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_12_40474001_40499001_66C;SPAN=2979;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:32:34.1:34.1,0,44:13:0:-33.92:34.03\n12\t40749548\t624895:1\tG\tG[12:40749805[\t49\tPASS\tEVDNC=ASSMB;HOMSEQ=G;MAPQ=60;MATEID=624895:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_40743501_40768501_23C;SPAN=257;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:17:17:4.5:49.5,4.5,0:17:0:-49.51:49.51\n12\t40749805\t624895:2\tG\t]12:40749548]G\t49\tPASS\tEVDNC=ASSMB;HOMSEQ=G;MAPQ=60;MATEID=624895:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_40743501_40768501_23C;SPAN=257;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:17:17:4.5:49.5,4.5,0:17:0:-49.51:49.51\n12\t42898157\t400359:2\tC\t[7:65418509[C\t75\tPASS\tDISC_MAPQ=55;EVDNC=DSCRD;IMPRECISE;MAPQ=55;MATEID=400359:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:65418509(-)-12:42898157(-)__7_65415001_65440001D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:25:13:6.9:75.9,6.9,0:0:25:-75.92:75.92\n12\t42898470\t400358:2\tG\tG]7:65418384]\t52\tPASS\tDISC_MAPQ=51;EVDNC=DSCRD;IMPRECISE;MAPQ=51;MATEID=400358:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:65418384(+)-12:42898470(+)__7_65415001_65440001D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:18:6:4.8:52.8,4.8,0:0:18:-52.81:52.81\n12\t43583657\t625822:1\tA\tA[12:43585747[\t42\tPASS\tEVDNC=ASSMB;HOMSEQ=AAGACATTCCA;MAPQ=60;MATEID=625822:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_43585501_43610501_31C;SPAN=2090;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:14:12:3.9:42.9,3.9,0:14:0:-42.91:42.91\n12\t43585747\t625822:2\tA\t]12:43583657]A\t42\tPASS\tEVDNC=ASSMB;HOMSEQ=AAGACATTCCA;MAPQ=60;MATEID=625822:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_43585501_43610501_31C;SPAN=2090;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:14:12:3.9:42.9,3.9,0:14:0:-42.91:42.91\n12\t45341570\t626174:2\tT\tT]12:33118851]\t36\tPASS\tDISC_MAPQ=57;EVDNC=DSCRD;IMPRECISE;MAPQ=57;MATEID=626174:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=12:33118851(+)-12:45341570(+)__12_45325001_45350001D;SPAN=12222719;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:12:11:3.3:36.3,3.3,0:0:12:-36.31:36.31\n12\t45509370\t626202:1\tA\tA[12:45516157[\t85\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=626202:2;MATENM=6;NM=1;NUMPARTS=2;SCTG=c_12_45496501_45521501_3C;SPAN=6787;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:28:14:7.8:85.8,7.8,0:28:0:-85.82:85.82\n12\t45516157\t626202:2\tT\t]12:45509370]T\t85\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=626202:1;MATENM=1;NM=6;NUMPARTS=2;SCTG=c_12_45496501_45521501_3C;SPAN=6787;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:28:14:7.8:85.8,7.8,0:28:0:-85.82:85.82\n12\t46181222\t626399:1\tT\t]12:46213999]T\t42\tPASS\tEVDNC=ASSMB;INSERTION=CCATGATC;MAPQ=60;MATEID=626399:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_46207001_46232001_27C;SPAN=32777;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:14:17:1.2:42.9,1.2,0:14:0:-43.71:43.71\n12\t46213999\t626399:2\tA\tA[12:46181222[\t42\tPASS\tEVDNC=ASSMB;INSERTION=CCATGATC;MAPQ=60;MATEID=626399:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_46207001_46232001_27C;SPAN=32777;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:14:17:1.2:42.9,1.2,0:14:0:-43.71:43.71\n12\t48331698\t627120:1\tT\tT[12:48334598[\t19\tPASS\tEVDNC=ASSMB;HOMSEQ=GTAATTAAGTTTATT;MAPQ=60;MATEID=627120:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_48314001_48339001_68C;SPAN=2900;SUBN=1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:25:19.4:19.4,0,42.5:8:0:-19.38:19.89\n12\t48334598\t627120:2\tG\t]12:48331698]G\t19\tPASS\tEVDNC=ASSMB;HOMSEQ=GTAATTAAGTTTATT;MAPQ=60;MATEID=627120:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_48314001_48339001_68C;SPAN=2900;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:25:19.4:19.4,0,42.5:8:0:-19.38:19.89\n12\t49261288\t627288:2\tC\t]12:33947951]C\t33\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=627288:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_49245001_49270001_33C;SPAN=15313337;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:11:13:0.3:33,0.3,0:11:0:-34.67:34.67\n12\t49498997\t187839:2\tG\tG[3:122934047[\t29\tPASS\tDISC_MAPQ=19;EVDNC=DSCRD;IMPRECISE;MAPQ=19;MATEID=187839:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=3:122934047(-)-12:49498997(+)__3_122916501_122941501D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:10:8:2.7:29.7,2.7,0:0:10:-29.71:29.71\n12\t49788828\t627372:1\tC\tC]12:49789140]\t79\tPASS\tDISC_MAPQ=60;EVDNC=TSI_G;HOMSEQ=TGAACCCAGGAGG;INSERTION=CAGCTACTCAGGAGGCTGAGGCAGGAGAATGGCG;MAPQ=60;MATEID=627372:2;MATENM=1;NM=0;NUMPARTS=3;SCTG=c_12_49784001_49809001_96C;SPAN=312;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:25:26:7.2:79.2,7.2,0:19:8:-79.22:79.22\n12\t49789140\t627372:2\tA\tA]12:49788828]\t79\tPASS\tDISC_MAPQ=60;EVDNC=TSI_G;HOMSEQ=TGAACCCAGGAGG;INSERTION=CAGCTACTCAGGAGGCTGAGGCAGGAGAATGGCG;MAPQ=60;MATEID=627372:1;MATENM=0;NM=1;NUMPARTS=3;SCTG=c_12_49784001_49809001_96C;SPAN=312;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:25:26:7.2:79.2,7.2,0:19:8:-79.22:79.22\n12\t49877510\t627407:1\tA\t]12:49877621]A\t81\tPASS\tEVDNC=ASSMB;HOMSEQ=AAG;MAPQ=60;MATEID=627407:2;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_12_49857501_49882501_91C;SPAN=111;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:30:64:77.9:81.2,0,77.9:30:0:-81.04:81.04\n12\t49877621\t627407:2\tG\tG[12:49877510[\t81\tPASS\tEVDNC=ASSMB;HOMSEQ=AAG;MAPQ=60;MATEID=627407:1;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_12_49857501_49882501_91C;SPAN=111;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:30:64:77.9:81.2,0,77.9:30:0:-81.04:81.04\n12\t49898240\t627456:1\tC\t]12:49898348]C\t24\tPASS\tEVDNC=ASSMB;HOMSEQ=CCCGGCT;MAPQ=60;MATEID=627456:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_49882001_49907001_9C;SPAN=108;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:55:24.2:24.2,0,113.3:12:0:-24.15:27.49\n12\t49898348\t627456:2\tT\tT[12:49898240[\t24\tPASS\tEVDNC=ASSMB;HOMSEQ=CCCGGCT;MAPQ=60;MATEID=627456:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_49882001_49907001_9C;SPAN=108;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:55:24.2:24.2,0,113.3:12:0:-24.15:27.49\n12\t50114523\t627507:1\tA\tA[12:50115022[\t11\tPASS\tDISC_MAPQ=22;EVDNC=ASDIS;HOMSEQ=TCCCAAAGTGCTGGGA;MAPQ=60;MATEID=627507:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_50102501_50127501_20C;SPAN=499;SUBN=1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:5:18:11.6:11.6,0,31.4:2:4:-11.45:12.06\n12\t50115022\t627507:2\tT\t]12:50114523]T\t11\tPASS\tDISC_MAPQ=17;EVDNC=ASDIS;HOMSEQ=TCCCAAAGTGCTGGGA;MAPQ=60;MATEID=627507:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_50102501_50127501_20C;SPAN=499;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:5:18:11.6:11.6,0,31.4:2:4:-11.45:12.06\n12\t52355941\t628411:1\tG\t]12:52358129]G\t22\tPASS\tEVDNC=ASSMB;HOMSEQ=G;MAPQ=60;MATEID=628411:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_52332001_52357001_104C;SPAN=2188;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:15:15.5:22.1,0,15.5:8:0:-22.25:22.25\n12\t52358129\t628411:2\tG\tG[12:52355941[\t22\tPASS\tEVDNC=ASSMB;HOMSEQ=G;MAPQ=60;MATEID=628411:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_52332001_52357001_104C;SPAN=2188;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:15:15.5:22.1,0,15.5:8:0:-22.25:22.25\n12\t52358976\t449149:2\tA\t]8:35555406]A\t26\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=449149:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=8:35555406(+)-12:52358976(-)__8_35549501_35574501D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:9:8:2.4:26.4,2.4,0:0:9:-26.41:26.41\n12\t52846424\t628594:1\tC\t]12:53082540]C\t33\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;INSERTION=GGG;MAPQ=60;MATEID=628594:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_52846501_52871501_22C;SPAN=236116;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:11:9:3:33,3,0:5:7:-33.01:33.01\n12\t53082540\t628594:2\tT\tT[12:52846424[\t33\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;INSERTION=GGG;MAPQ=12;MATEID=628594:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_52846501_52871501_22C;SPAN=236116;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:11:9:3:33,3,0:5:7:-33.01:33.01\n12\t53612036\t628841:1\tC\tC[12:53612319[\t3\tPASS\tEVDNC=ASSMB;HOMSEQ=CTCTGTCACCCAGGCTGGAGTGCAGTGGC;MAPQ=60;MATEID=628841:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_53606001_53631001_7C;SPAN=283;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:4:35:3.5:3.5,0,82.7:4:0:-3.366:7.934\n12\t53612319\t628841:2\tC\t]12:53612036]C\t3\tPASS\tEVDNC=ASSMB;HOMSEQ=CTCTGTCACCCAGGCTGGAGTGCAGTGGC;MAPQ=60;MATEID=628841:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_53606001_53631001_7C;SPAN=283;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:4:35:3.5:3.5,0,82.7:4:0:-3.366:7.934\n12\t54231570\t629060:1\tA\tA]12:54239608]\t30\tPASS\tDISC_MAPQ=47;EVDNC=ASDIS;MAPQ=60;MATEID=629060:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_54218501_54243501_67C;SPAN=8038;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:34:30.2:30.2,0,53.3:7:6:-30.06:30.47\n12\t54239608\t629060:2\tT\tT]12:54231570]\t30\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;MAPQ=60;MATEID=629060:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_54218501_54243501_67C;SPAN=8038;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:34:30.2:30.2,0,53.3:7:6:-30.06:30.47\n12\t56596312\t629585:1\tG\tG[15:39702424[\t85\tPASS\tEVDNC=ASSMB;INSERTION=AGCTAGGTGGATTTTCTCTTC;MAPQ=60;MATEID=629585:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_56595001_56620001_2C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:28:14:7.8:85.8,7.8,0:28:0:-85.82:85.82\n12\t59699013\t630191:2\tC\t[12:33946492[C\t66\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=G;MAPQ=60;MATEID=630191:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_59682001_59707001_18C;SPAN=25752521;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:22:16:6:66,6,0:19:8:-66.02:66.02\n12\t60018568\t630268:1\tT\tT[12:60019728[\t36\tPASS\tEVDNC=ASSMB;HOMSEQ=GAAT;MAPQ=50;MATEID=630268:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_60000501_60025501_61C;SPAN=1160;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:24:23:36.2,0,23:13:0:-36.29:36.29\n12\t60019728\t630268:2\tG\t]12:60018568]G\t36\tPASS\tEVDNC=ASSMB;HOMSEQ=GAAT;MAPQ=60;MATEID=630268:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_60000501_60025501_61C;SPAN=1160;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:24:23:36.2,0,23:13:0:-36.29:36.29\n12\t60128185\t630298:1\tT\tT[12:60131254[\t99\tPASS\tDISC_MAPQ=59;EVDNC=DSCRD;IMPRECISE;MAPQ=59;MATEID=630298:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=12:60128185(+)-12:60131254(-)__12_60123001_60148001D;SPAN=3069;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:34:9:9.3:102.3,9.3,0:0:34:-102.3:102.3\n12\t60131254\t630298:2\tA\t]12:60128185]A\t99\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=630298:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=12:60128185(+)-12:60131254(-)__12_60123001_60148001D;SPAN=3069;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:34:9:9.3:102.3,9.3,0:0:34:-102.3:102.3\n12\t61767342\t630769:1\tA\t[12:61774625[A\t59\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;INSERTION=TTTCATTTTTT;MAPQ=60;MATEID=630769:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_61764501_61789501_34C;SPAN=7283;SUBN=1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:22:48:59.3:59.3,0,59.3:18:11:-59.13:59.13\n12\t61774625\t630769:2\tA\t[12:61767342[A\t59\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;INSERTION=TTTCATTTTTT;MAPQ=60;MATEID=630769:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_61764501_61789501_34C;SPAN=7283;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:22:48:59.3:59.3,0,59.3:18:11:-59.13:59.13\n12\t61805169\t630789:1\tT\t]17:59896324]T\t17\tPASS\tEVDNC=ASSMB;HOMSEQ=TAG;MAPQ=60;MATEID=630789:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_12_61789001_61814001_38C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:7:20:17.6:17.6,0,30.8:7:0:-17.49:17.74\n12\t62394097\t630980:1\tA\t]12:62450606]A\t33\tPASS\tDISC_MAPQ=58;EVDNC=ASDIS;HOMSEQ=A;MAPQ=60;MATEID=630980:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_62377001_62402001_36C;SPAN=56509;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:35:33.2:33.2,0,53:11:11:-33.08:33.38\n12\t62450606\t630980:2\tA\tA[12:62394097[\t33\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=A;MAPQ=60;MATEID=630980:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_62377001_62402001_36C;SPAN=56509;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:35:33.2:33.2,0,53:11:11:-33.08:33.38\n12\t62838638\t631147:1\tC\tC[12:62838950[\t99\tPASS\tEVDNC=ASSMB;HOMSEQ=AAGAATAATAGCTTCTC;MAPQ=60;MATEID=631147:2;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_12_62818001_62843001_7C;SPAN=312;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:34:28:9.3:102.3,9.3,0:34:0:-102.3:102.3\n12\t62838950\t631147:2\tA\t]12:62838638]A\t99\tPASS\tEVDNC=ASSMB;HOMSEQ=AAGAATAATAGCTTCTC;MAPQ=60;MATEID=631147:1;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_12_62818001_62843001_7C;SPAN=312;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:34:28:9.3:102.3,9.3,0:34:0:-102.3:102.3\n12\t63545291\t631382:1\tG\tG[12:63740374[\t17\tPASS\tDISC_MAPQ=55;EVDNC=DSCRD;IMPRECISE;MAPQ=55;MATEID=631382:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=12:63545291(+)-12:63740374(-)__12_63528501_63553501D;SPAN=195083;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:30:17.9:17.9,0,57.5:0:8:-17.98:19.13\n12\t63552952\t631386:1\tG\tG[12:63553177[\t85\tPASS\tEVDNC=ASSMB;HOMSEQ=AGG;MAPQ=60;MATEID=631386:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_63528501_63553501_13C;SPAN=225;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:28:27:7.8:85.8,7.8,0:28:0:-85.82:85.82\n12\t63553177\t631386:2\tA\t]12:63552952]A\t85\tPASS\tEVDNC=ASSMB;HOMSEQ=AGG;MAPQ=60;MATEID=631386:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_63528501_63553501_13C;SPAN=225;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:28:27:7.8:85.8,7.8,0:28:0:-85.82:85.82\n12\t63740374\t631382:2\tT\t]12:63545291]T\t17\tPASS\tDISC_MAPQ=59;EVDNC=DSCRD;IMPRECISE;MAPQ=59;MATEID=631382:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=12:63545291(+)-12:63740374(-)__12_63528501_63553501D;SPAN=195083;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:30:17.9:17.9,0,57.5:0:8:-17.98:19.13\n12\t65229310\t632064:1\tT\tT[12:110829790[\t17\tPASS\tEVDNC=ASSMB;INSERTION=AAG;MAPQ=60;MATEID=632064:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_65219001_65244001_43C;SPAN=45600480;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:7:21:17.3:17.3,0,33.8:7:0:-17.2:17.56\n12\t66737454\t632476:1\tT\tT[12:66738084[\t19\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=632476:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_66738001_66763001_6C;SPAN=630;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:7:12:9.8:19.7,0,9.8:7:0:-19.89:19.89\n12\t66738084\t632476:2\tA\t]12:66737454]A\t19\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=632476:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_66738001_66763001_6C;SPAN=630;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:7:12:9.8:19.7,0,9.8:7:0:-19.89:19.89\n12\t69153592\t648631:1\tA\t]12:118295227]A\t22\tPASS\tDISC_MAPQ=27;EVDNC=DSCRD;IMPRECISE;MAPQ=27;MATEID=648631:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=12:69153592(-)-12:118295227(+)__12_118286001_118311001D;SPAN=49141635;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:16:15.5:22.1,0,15.5:0:8:-21.93:21.93\n12\t70201197\t633448:1\tA\tA[12:70203785[\t99\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=633448:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=12:70201197(+)-12:70203785(-)__12_70192501_70217501D;SPAN=2588;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:43:25:12:132,12,0:0:43:-132:132\n12\t70203785\t633448:2\tA\t]12:70201197]A\t99\tPASS\tDISC_MAPQ=58;EVDNC=DSCRD;IMPRECISE;MAPQ=58;MATEID=633448:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=12:70201197(+)-12:70203785(-)__12_70192501_70217501D;SPAN=2588;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:43:25:12:132,12,0:0:43:-132:132\n12\t70478576\t633549:1\tT\tT[12:70484436[\t99\tPASS\tDISC_MAPQ=58;EVDNC=DSCRD;IMPRECISE;MAPQ=58;MATEID=633549:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=12:70478576(+)-12:70484436(-)__12_70462001_7048700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158.4\n12\t80454444\t635863:1\tA\t[12:80461951[A\t23\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=635863:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=12:80454444(-)-12:80461951(-)__12_80433501_80458501D;SPAN=7507;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:8:7:2.1:23.1,2.1,0:0:8:-23.11:23.11\n12\t80461951\t635863:2\tG\t[12:80454444[G\t23\tPASS\tDISC_MAPQ=42;EVDNC=DSCRD;IMPRECISE;MAPQ=42;MATEID=635863:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=12:80454444(-)-12:80461951(-)__12_80433501_80458501D;SPAN=7507;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:8:7:2.1:23.1,2.1,0:0:8:-23.11:23.11\n12\t83565451\t636682:1\tC\tC[12:83565755[\t29\tPASS\tEVDNC=ASSMB;HOMSEQ=AAGACTTGTACTC;MAPQ=60;MATEID=636682:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_83545001_83570001_69C;SPAN=304;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:26:29:29,0,35.6:11:0:-29:29.05\n12\t83565755\t636682:2\tA\t]12:83565451]A\t29\tPASS\tEVDNC=ASSMB;HOMSEQ=AAGACTTGTACTC;MAPQ=60;MATEID=636682:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_83545001_83570001_69C;SPAN=304;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:26:29:29,0,35.6:11:0:-29:29.05\n12\t83648505\t636707:1\tT\tT[12:83648804[\t79\tPASS\tEVDNC=ASSMB;HOMSEQ=AAAAAAAACAAATTT;MAPQ=60;MATEID=636707:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_12_83643001_83668001_134C;SPAN=299;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:27:34:3.8:79.7,0,3.8:27:0:-83.31:83.31\n12\t83648804\t636707:2\tA\t]12:83648505]A\t79\tPASS\tEVDNC=ASSMB;HOMSEQ=AAAAAAAACAAATTT;MAPQ=60;MATEID=636707:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_12_83643001_83668001_134C;SPAN=299;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:27:34:3.8:79.7,0,3.8:27:0:-83.31:83.31\n12\t84058958\t636884:1\tC\t]12:84059687]C\t37\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=CT;MAPQ=60;MATEID=636884:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_84059501_84084501_4C;SPAN=729;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:19:8:37.7,0,8:6:10:-38.44:38.44\n12\t84059687\t636884:2\tT\tT[12:84058958[\t37\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=CT;MAPQ=60;MATEID=636884:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_84059501_84084501_4C;SPAN=729;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:19:8:37.7,0,8:6:10:-38.44:38.44\n12\t84199335\t636931:1\tA\tA[12:84202233[\t85\tPASS\tEVDNC=ASSMB;HOMSEQ=GCCTCA;MAPQ=60;MATEID=636931:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_84182001_84207001_67C;SPAN=2898;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:28:25:7.8:85.8,7.8,0:28:0:-85.82:85.82\n12\t84202233\t636931:2\tG\t]12:84199335]G\t85\tPASS\tEVDNC=ASSMB;HOMSEQ=GCCTCA;MAPQ=60;MATEID=636931:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_84182001_84207001_67C;SPAN=2898;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:28:25:7.8:85.8,7.8,0:28:0:-85.82:85.82\n12\t86129547\t637649:1\tT\tT[12:86129858[\t79\tPASS\tEVDNC=ASSMB;HOMSEQ=CACAATCTTT;MAPQ=60;MATEID=637649:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_86117501_86142501_101C;SPAN=311;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:26:26:7.2:79.2,7.2,0:26:0:-79.22:79.22\n12\t86129858\t637649:2\tC\t]12:86129547]C\t79\tPASS\tEVDNC=ASSMB;HOMSEQ=CACAATCTTT;MAPQ=60;MATEID=637649:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_86117501_86142501_101C;SPAN=311;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:26:26:7.2:79.2,7.2,0:26:0:-79.22:79.22\n12\t86259796\t988096:1\tT\t]Un_KN707677v1_decoy:7267]T\t89\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=988096:2;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_528_1_7267_0C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:29:7:8.1:89.1,8.1,0:29:0:-89.12:89.12\n12\t90223562\t638867:1\tT\t]12:90223665]T\t48\tPASS\tEVDNC=ASSMB;HOMSEQ=TATATATCCTATATATATACATATATACTATAGT;MAPQ=35;MATEID=638867:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_90209001_90234001_76C;SPAN=103;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:18:38:45.5:48.8,0,45.5:18:0:-48.74:48.74\n12\t90223665\t638867:2\tT\tT[12:90223562[\t48\tPASS\tEVDNC=ASSMB;HOMSEQ=TATATATCCTATATATATACATATATACTATAGT;MAPQ=60;MATEID=638867:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_90209001_90234001_76C;SPAN=103;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:18:38:45.5:48.8,0,45.5:18:0:-48.74:48.74\n12\t93500781\t640053:1\tC\t]12:93501896]C\t83\tPASS\tEVDNC=ASSMB;INSERTION=AAATTAAA;MAPQ=60;MATEID=640053:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_93492001_93517001_1C;SPAN=1115;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:29:44:27.2:83.3,0,27.2:29:0:-84.92:84.92\n12\t93501029\t640054:1\tG\tG[12:93501904[\t99\tPASS\tEVDNC=ASSMB;HOMSEQ=GG;MAPQ=60;MATEID=640054:2;MATENM=2;NM=2;NUMPARTS=2;SCTG=c_12_93492001_93517001_80C;SPAN=875;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:34:43:7.7:100.1,0,7.7:34:0:-104.8:104.8\n12\t93501896\t640053:2\tT\tT[12:93500781[\t83\tPASS\tEVDNC=ASSMB;INSERTION=AAATTAAA;MAPQ=60;MATEID=640053:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_93492001_93517001_1C;SPAN=1115;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:29:44:27.2:83.3,0,27.2:29:0:-84.92:84.92\n12\t93501904\t640054:2\tG\t]12:93501029]G\t99\tPASS\tEVDNC=ASSMB;HOMSEQ=GG;MAPQ=60;MATEID=640054:1;MATENM=2;NM=2;NUMPARTS=2;SCTG=c_12_93492001_93517001_80C;SPAN=875;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:34:43:7.7:100.1,0,7.7:34:0:-104.8:104.8\n12\t93964568\t640176:1\tG\tG[12:93964865[\t25\tPASS\tEVDNC=ASSMB;HOMSEQ=AGAATTAGGAGCTGGG;MAPQ=60;MATEID=640176:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_12_93957501_93982501_64C;SPAN=297;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:27:25.4:25.4,0,41.9:10:0:-25.42:25.66\n12\t93964865\t640176:2\tA\t]12:93964568]A\t25\tPASS\tEVDNC=ASSMB;HOMSEQ=AGAATTAGGAGCTGGG;MAPQ=60;MATEID=640176:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_12_93957501_93982501_64C;SPAN=297;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:27:25.4:25.4,0,41.9:10:0:-25.42:25.66\n12\t95839932\t641035:1\tG\tG[12:95842549[\t69\tPASS\tDISC_MAPQ=56;EVDNC=DSCRD;IMPRECISE;MAPQ=56;MATEID=641035:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=12:95839932(+)-12:95842549(-)__12_95819501_95844501D;SPAN=2617;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:23:20:6.3:69.3,6.3,0:0:23:-69.32:69.32\n12\t95842549\t641035:2\tA\t]12:95839932]A\t69\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=641035:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=12:95839932(+)-12:95842549(-)__12_95819501_95844501D;SPAN=2617;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:23:20:6.3:69.3,6.3,0:0:23:-69.32:69.32\n12\t95946577\t641078:1\tC\tC[12:95949177[\t99\tPASS\tEVDNC=ASSMB;HOMSEQ=AAGAGACTGC;MAPQ=60;MATEID=641078:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_12_95942001_95967001_32C;SPAN=2600;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:39:70:66.2:109.1,0,66.2:39:0:-109.6:109.6\n12\t95949177\t641078:2\tA\t]12:95946577]A\t99\tPASS\tEVDNC=ASSMB;HOMSEQ=AAGAGACTGC;MAPQ=60;MATEID=641078:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_12_95942001_95967001_32C;SPAN=2600;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:39:70:66.2:109.1,0,66.2:39:0:-109.6:109.6\n12\t97093816\t641559:1\tT\tT[12:97094584[\t13\tPASS\tEVDNC=ASSMB;HOMSEQ=TT;MAPQ=60;MATEID=641559:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_12_97093501_97118501_32C;SPAN=768;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:7:36:13.1:13.1,0,75.8:7:0:-12.99:15.64\n12\t97094584\t641559:2\tT\t]12:97093816]T\t13\tPASS\tEVDNC=ASSMB;HOMSEQ=TT;MAPQ=60;MATEID=641559:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_12_97093501_97118501_32C;SPAN=768;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:7:36:13.1:13.1,0,75.8:7:0:-12.99:15.64\n12\t97160963\t641593:1\tT\tT[12:97161278[\t99\tPASS\tEVDNC=ASSMB;HOMSEQ=GAGCTTGGTGTTTT;MAPQ=60;MATEID=641593:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_12_97142501_97167501_30C;SPAN=315;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:37:29:10.2:112.2,10.2,0:37:0:-112.2:112.2\n12\t97161278\t641593:2\tG\t]12:97160963]G\t99\tPASS\tEVDNC=ASSMB;HOMSEQ=GAGCTTGGTGTTTT;MAPQ=60;MATEID=641593:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_12_97142501_97167501_30C;SPAN=315;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:37:29:10.2:112.2,10.2,0:37:0:-112.2:112.2\n12\t98569527\t642178:1\tT\tT[12:99037303[\t26\tPASS\tEVDNC=ASSMB;HOMSEQ=T;MAPQ=60;MATEID=642178:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_99029001_99054001_31C;SPAN=467776;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:13:6.2:26,0,6.2:9:0:-26.69:26.69\n12\t99037303\t642178:2\tT\t]12:98569527]T\t26\tPASS\tEVDNC=ASSMB;HOMSEQ=T;MAPQ=60;MATEID=642178:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_99029001_99054001_31C;SPAN=467776;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:13:6.2:26,0,6.2:9:0:-26.69:26.69\n12\t100282199\t642588:1\tA\tA[12:100282483[\t99\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=GCCTGGCTAATTTTTGTA;MAPQ=60;MATEID=642588:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_100278501_100303501_22C;SPAN=284;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:38:27:10.5:115.5,10.5,0:30:9:-115.5:115.5\n12\t100282483\t642588:2\tG\t]12:100282199]G\t99\tPASS\tDISC_MAPQ=58;EVDNC=ASDIS;HOMSEQ=GCCTGGCTAATTTTTGTA;MAPQ=60;MATEID=642588:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_100278501_100303501_22C;SPAN=284;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:38:27:10.5:115.5,10.5,0:30:9:-115.5:115.5\n12\t100627443\t642686:1\tT\t]12:100717132]T\t26\tPASS\tDISC_MAPQ=49;EVDNC=ASDIS;INSERTION=GCAAAC;MAPQ=60;MATEID=642686:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_100695001_100720001_30C;SPAN=89689;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:12:3.2:26.3,0,3.2:7:4:-27.29:27.29\n12\t100717132\t642686:2\tG\tG[12:100627443[\t26\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;INSERTION=GCAAAC;MAPQ=60;MATEID=642686:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_100695001_100720001_30C;SPAN=89689;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:12:3.2:26.3,0,3.2:7:4:-27.29:27.29\n12\t101708632\t643044:1\tG\tG[12:101713309[\t14\tPASS\tEVDNC=ASSMB;HOMSEQ=ACAG;MAPQ=60;MATEID=643044:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_101699501_101724501_55C;SPAN=4677;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:7:31:14.6:14.6,0,60.8:7:0:-14.39:16.16\n12\t101713309\t643044:2\tA\t]12:101708632]A\t14\tPASS\tEVDNC=ASSMB;HOMSEQ=ACAG;MAPQ=60;MATEID=643044:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_101699501_101724501_55C;SPAN=4677;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:7:31:14.6:14.6,0,60.8:7:0:-14.39:16.16\n12\t103965852\t651667:1\tG\t[12:125316602[G\t99\tPASS\tDISC_MAPQ=55;EVDNC=ASDIS;MAPQ=60;MATEID=651667:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_12_125293001_125318001_45C;SPAN=21350750;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:47:23:12.9:141.9,12.9,0:39:13:-141.9:141.9\n12\t103985728\t643737:1\tA\tA[12:103986948[\t26\tPASS\tDISC_MAPQ=15;EVDNC=ASDIS;MAPQ=60;MATEID=643737:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_103978001_104003001_17C;SPAN=1220;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:45:26.9:26.9,0,86.3:9:3:-26.96:28.7\n12\t103986948\t643737:2\tT\t]12:103985728]T\t26\tPASS\tDISC_MAPQ=35;EVDNC=ASDIS;MAPQ=48;MATEID=643737:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_103978001_104003001_17C;SPAN=1220;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:45:26.9:26.9,0,86.3:9:3:-26.96:28.7\n12\t103988861\t643740:1\tA\tA]12:125316718]\t75\tPASS\tDISC_MAPQ=15;EVDNC=DSCRD;IMPRECISE;MAPQ=15;MATEID=643740:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=12:103988861(+)-12:125316718(+)__12_103978001_104003001D;SPAN=21327857;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:25:29:1.5:75.9,1.5,0:0:25:-79.34:79.34\n12\t104125233\t126956:2\tT\t]2:171438928]T\t99\tPASS\tDISC_MAPQ=0;EVDNC=TSI_L;HOMSEQ=TCAGTC;MAPQ=60;MATEID=126956:1;MATENM=2;NM=0;NUMPARTS=3;SCTG=c_2_171426501_171451501_8C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:47:30:12.9:141.9,12.9,0:46:9:-141.9:141.9\n12\t104975278\t644146:1\tA\tA[12:104979768[\t92\tPASS\tEVDNC=ASSMB;HOMSEQ=TATA;MAPQ=60;MATEID=644146:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_104958001_104983001_9C;SPAN=4490;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:30:24:8.4:92.4,8.4,0:30:0:-92.42:92.42\n12\t104979768\t644146:2\tT\t]12:104975278]T\t92\tPASS\tEVDNC=ASSMB;HOMSEQ=TATA;MAPQ=60;MATEID=644146:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_104958001_104983001_9C;SPAN=4490;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:30:24:8.4:92.4,8.4,0:30:0:-92.42:92.42\n12\t107809482\t420918:2\tA\t]7:111413698]A\t75\tPASS\tEVDNC=ASSMB;HOMSEQ=AA;MAPQ=60;MATEID=420918:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_7_111401501_111426501_27C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:25:22:6.9:75.9,6.9,0:25:0:-75.92:75.92\n12\t107828783\t644977:1\tA\tA[12:107829087[\t41\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AAAAGCTGGTCCA;MAPQ=60;MATEID=644977:2;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_12_107824501_107849501_47C;SPAN=304;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:15:30:34.4:41,0,34.4:12:6:-41.11:41.11\n12\t107829087\t644977:2\tA\t]12:107828783]A\t41\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AAAAGCTGGTCCA;MAPQ=60;MATEID=644977:1;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_12_107824501_107849501_47C;SPAN=304;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:15:30:34.4:41,0,34.4:12:6:-41.11:41.11\n12\t107971134\t645049:1\tT\t[12:107972746[T\t27\tPASS\tDISC_MAPQ=34;EVDNC=ASDIS;HOMSEQ=TTCTG;MAPQ=0;MATEID=645049:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_107971501_107996501_18C;SPAN=1612;SUBN=6;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:30:27.8:27.8,0,47.6:9:6:-27.88:28.16\n12\t107972746\t645049:2\tC\t[12:107971134[C\t27\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TTCTG;MAPQ=60;MATEID=645049:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_107971501_107996501_18C;SPAN=1612;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:30:27.8:27.8,0,47.6:9:6:-27.88:28.16\n12\t107973569\t645044:2\tT\tT[1:114957233[\t19\tPASS\tEVDNC=ASSMB;HOMSEQ=TT;MAPQ=60;MATEID=645044:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_12_107971501_107996501_49C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:25:19.4:19.4,0,42.5:8:0:-19.38:19.89\n12\t109661407\t645728:1\tA\t]12:109661985]A\t52\tPASS\tDISC_MAPQ=49;EVDNC=DSCRD;IMPRECISE;MAPQ=49;MATEID=645728:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=12:109661407(-)-12:109661985(+)__12_109637501_109662501D;SPAN=578;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:21:61:52.4:52.4,0,98.6:0:21:-52.17:53.04\n12\t109661985\t645728:2\tT\tT[12:109661407[\t52\tPASS\tDISC_MAPQ=36;EVDNC=DSCRD;IMPRECISE;MAPQ=36;MATEID=645728:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=12:109661407(-)-12:109661985(+)__12_109637501_109662501D;SPAN=578;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:21:61:52.4:52.4,0,98.6:0:21:-52.17:53.04\n12\t109868246\t645814:1\tA\t[12:109912750[A\t33\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AGTG;MAPQ=60;MATEID=645814:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_109858001_109883001_7C;SPAN=44504;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:21:17.3:33.8,0,17.3:11:5:-33.92:33.92\n12\t109912750\t645814:2\tC\t[12:109868246[C\t33\tPASS\tDISC_MAPQ=59;EVDNC=ASDIS;HOMSEQ=AGTG;MAPQ=60;MATEID=645814:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_109858001_109883001_7C;SPAN=44504;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:21:17.3:33.8,0,17.3:11:5:-33.92:33.92\n12\t110216250\t645904:1\tG\tG[12:110216550[\t9\tPASS\tEVDNC=ASSMB;HOMSEQ=CTCTGTTGCCCAGGCTGGAGTGCAGTGG;MAPQ=60;MATEID=645904:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_110201001_110226001_19C;SPAN=300;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:6:36:9.8:9.8,0,79.1:6:0:-9.687:12.96\n12\t110216550\t645904:2\tC\t]12:110216250]C\t9\tPASS\tEVDNC=ASSMB;HOMSEQ=CTCTGTTGCCCAGGCTGGAGTGCAGTGG;MAPQ=60;MATEID=645904:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_110201001_110226001_19C;SPAN=300;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:6:36:9.8:9.8,0,79.1:6:0:-9.687:12.96\n12\t110829790\t632064:2\tA\t]12:65229310]A\t17\tPASS\tEVDNC=ASSMB;INSERTION=AAG;MAPQ=60;MATEID=632064:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_65219001_65244001_43C;SPAN=45600480;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:7:21:17.3:17.3,0,33.8:7:0:-17.2:17.56\n12\t114529434\t647132:1\tA\t]12:114549384]A\t34\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;INSERTION=A;MAPQ=60;MATEID=647132:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_12_114537501_114562501_41C;SPAN=19950;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:18:8.3:34.7,0,8.3:8:7:-35.24:35.24\n12\t114549384\t647132:2\tT\tT[12:114529434[\t34\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;INSERTION=A;MAPQ=60;MATEID=647132:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_12_114537501_114562501_41C;SPAN=19950;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:18:8.3:34.7,0,8.3:8:7:-35.24:35.24\n12\t118295227\t648631:2\tG\tG[12:69153592[\t22\tPASS\tDISC_MAPQ=55;EVDNC=DSCRD;IMPRECISE;MAPQ=55;MATEID=648631:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=12:69153592(-)-12:118295227(+)__12_118286001_118311001D;SPAN=49141635;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:16:15.5:22.1,0,15.5:0:8:-21.93:21.93\n12\t119585902\t649147:1\tA\tA[12:119587086[\t67\tPASS\tDISC_MAPQ=52;EVDNC=ASDIS;HOMSEQ=GCCTCCCAAAGTGCTGGGATTACAGGCATGA;MAPQ=60;MATEID=649147:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_119584501_119609501_35C;SPAN=1184;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:23:29:5:67.7,0,5:15:15:-70.94:70.94\n12\t119587086\t649147:2\tG\t]12:119585902]G\t67\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=GCCTCCCAAAGTGCTGGGATTACAGGCATGA;MAPQ=60;MATEID=649147:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_119584501_119609501_35C;SPAN=1184;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:23:29:5:67.7,0,5:15:15:-70.94:70.94\n12\t120852804\t649669:1\tA\t]12:120852878]A\t69\tPASS\tEVDNC=ASSMB;INSERTION=GATATATGAAATACATATTTCATATAATATATACATATG;MAPQ=60;MATEID=649669:2;MATENM=2;NM=3;NUMPARTS=2;SCTG=c_12_120834001_120859001_57C;SPAN=74;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:26:57:69.8:69.8,0,73.1:26:0:-69.8:69.81\n12\t120852878\t649669:2\tT\tT[12:120852804[\t69\tPASS\tEVDNC=ASSMB;INSERTION=GATATATGAAATACATATTTCATATAATATATACATATG;MAPQ=60;MATEID=649669:1;MATENM=3;NM=2;NUMPARTS=2;SCTG=c_12_120834001_120859001_57C;SPAN=74;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:26:57:69.8:69.8,0,73.1:26:0:-69.8:69.81\n12\t124438685\t651290:1\tA\t]12:124439523]A\t38\tPASS\tDISC_MAPQ=22;EVDNC=DSCRD;IMPRECISE;MAPQ=22;MATEID=651290:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=12:124438685(-)-12:124439523(+)__12_124435501_124460501D;SPAN=838;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:15:39:38.6:38.6,0,58.4:0:15:-38.55:38.8\n12\t124439523\t651290:2\tG\tG[12:124438685[\t38\tPASS\tDISC_MAPQ=25;EVDNC=DSCRD;IMPRECISE;MAPQ=25;MATEID=651290:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=12:124438685(-)-12:124439523(+)__12_124435501_124460501D;SPAN=838;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:15:39:38.6:38.6,0,58.4:0:15:-38.55:38.8\n12\t124849873\t651462:1\tG\tG[12:124850162[\t62\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=CAGGAGTTCCAGACCAGCCTGG;MAPQ=60;MATEID=651462:2;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_12_124827501_124852501_120C;SPAN=289;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:21:26:2.6:62,0,2.6:14:11:-65.14:65.14\n12\t124850162\t651462:2\tC\t]12:124849873]C\t62\tPASS\tDISC_MAPQ=59;EVDNC=ASDIS;HOMSEQ=CAGGAGTTCCAGACCAGCCTGG;MAPQ=60;MATEID=651462:1;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_12_124827501_124852501_120C;SPAN=289;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:21:26:2.6:62,0,2.6:14:11:-65.14:65.14\n12\t125114682\t651626:1\tC\tC[12:125114918[\t23\tPASS\tEVDNC=ASSMB;HOMSEQ=CACATGGTAAGGGCTTCCCC;MAPQ=60;MATEID=651626:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_125097001_125122001_36C;SPAN=236;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:34:23.6:23.6,0,59.9:10:0:-23.45:24.42\n12\t125114918\t651626:2\tC\t]12:125114682]C\t23\tPASS\tEVDNC=ASSMB;HOMSEQ=CACATGGTAAGGGCTTCCCC;MAPQ=60;MATEID=651626:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_125097001_125122001_36C;SPAN=236;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:34:23.6:23.6,0,59.9:10:0:-23.45:24.42\n12\t125316601\t619289:2\tA\t[12:25803192[A\t52\tPASS\tDISC_MAPQ=57;EVDNC=DSCRD;IMPRECISE;MAPQ=57;MATEID=619289:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=12:25803192(-)-12:125316601(-)__12_25798501_25823501D;SPAN=99513409;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:18:10:4.8:52.8,4.8,0:0:18:-52.81:52.81\n12\t125316602\t651667:2\tC\t[12:103965852[C\t99\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;MAPQ=60;MATEID=651667:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_12_125293001_125318001_45C;SPAN=21350750;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:47:23:12.9:141.9,12.9,0:39:13:-141.9:141.9\n12\t125316718\t643740:2\tC\tC]12:103988861]\t75\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=643740:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=12:103988861(+)-12:125316718(+)__12_103978001_104003001D;SPAN=21327857;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:25:29:1.5:75.9,1.5,0:0:25:-79.34:79.34\n12\t126832129\t652191:2\tC\t[2:74561101[C\t51\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=CTCCTCCTCCTTCTCCTCCTCCTCCTTCTCCTCCTCCTCCTTCTCCTCCTCCT;MAPQ=60;MATEID=652191:1;MATENM=8;NM=0;NUMPARTS=2;SCTG=c_12_126812001_126837001_50C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:18:27:15.5:51.8,0,15.5:12:4:-52.86:52.86\n12\t127040067\t652330:1\tT\tT[12:127040673[\t47\tPASS\tEVDNC=ASSMB;HOMSEQ=CTAT;MAPQ=60;MATEID=652330:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_127032501_127057501_17C;SPAN=606;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:17:30:27.8:47.6,0,27.8:17:0:-47.96:47.96\n12\t127040673\t652330:2\tC\t]12:127040067]C\t47\tPASS\tEVDNC=ASSMB;HOMSEQ=CTAT;MAPQ=60;MATEID=652330:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_127032501_127057501_17C;SPAN=606;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:17:30:27.8:47.6,0,27.8:17:0:-47.96:47.96\n12\t127310968\t652478:1\tT\tT[12:127311375[\t9\tPASS\tEVDNC=ASSMB;HOMSEQ=T;MAPQ=60;MATEID=652478:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_127302001_127327001_104C;SPAN=407;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:6:36:9.8:9.8,0,79.1:6:0:-9.687:12.96\n12\t127311375\t652478:2\tT\t]12:127310968]T\t9\tPASS\tEVDNC=ASSMB;HOMSEQ=T;MAPQ=60;MATEID=652478:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_127302001_127327001_104C;SPAN=407;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:6:36:9.8:9.8,0,79.1:6:0:-9.687:12.96\n12\t127553449\t652605:1\tT\tT[12:127553750[\t45\tPASS\tEVDNC=ASSMB;HOMSEQ=CTGTTTCTTTTCTTCTT;MAPQ=60;MATEID=652605:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_12_127547001_127572001_127C;SPAN=301;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:16:26:19.1:45.5,0,19.1:16:0:-46.05:46.05\n12\t127553750\t652605:2\tC\t]12:127553449]C\t45\tPASS\tEVDNC=ASSMB;HOMSEQ=CTGTTTCTTTTCTTCTT;MAPQ=60;MATEID=652605:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_12_127547001_127572001_127C;SPAN=301;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:16:26:19.1:45.5,0,19.1:16:0:-46.05:46.05\n12\t129235285\t653458:1\tT\tT[12:129235878[\t19\tPASS\tEVDNC=ASSMB;HOMSEQ=AT;MAPQ=60;MATEID=653458:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_12_129213001_129238001_115C;SPAN=593;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:36:19.7:19.7,0,69.2:9:0:-19.59:21.23\n12\t129235878\t653458:2\tA\t]12:129235285]A\t19\tPASS\tEVDNC=ASSMB;HOMSEQ=AT;MAPQ=60;MATEID=653458:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_12_129213001_129238001_115C;SPAN=593;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:36:19.7:19.7,0,69.2:9:0:-19.59:21.23\n12\t129575758\t653630:1\tT\tT[12:129576074[\t92\tPASS\tEVDNC=ASSMB;HOMSEQ=CAGATAGATACATTTT;MAPQ=60;MATEID=653630:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_129556001_129581001_93C;SPAN=316;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:30:28:8.4:92.4,8.4,0:30:0:-92.42:92.42\n12\t129576074\t653630:2\tC\t]12:129575758]C\t92\tPASS\tEVDNC=ASSMB;HOMSEQ=CAGATAGATACATTTT;MAPQ=60;MATEID=653630:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_129556001_129581001_93C;SPAN=316;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:30:28:8.4:92.4,8.4,0:30:0:-92.42:92.42\n12\t130043305\t653846:1\tA\t]12:130043472]A\t22\tPASS\tEVDNC=ASSMB;HOMSEQ=ACACATGCACACAC;MAPQ=60;MATEID=653846:2;MATENM=1;NM=2;NUMPARTS=2;SCTG=c_12_130021501_130046501_3C;SPAN=167;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:60:22.7:22.7,0,128.3:12:0:-22.75:26.98\n12\t130043472\t653846:2\tC\tC[12:130043305[\t22\tPASS\tEVDNC=ASSMB;HOMSEQ=ACACATGCACACAC;MAPQ=60;MATEID=653846:1;MATENM=2;NM=1;NUMPARTS=2;SCTG=c_12_130021501_130046501_3C;SPAN=167;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:60:22.7:22.7,0,128.3:12:0:-22.75:26.98\n12\t131226570\t654514:1\tA\t[12:131439049[A\t18\tPASS\tDISC_MAPQ=52;EVDNC=DSCRD;IMPRECISE;MAPQ=52;MATEID=654514:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=12:131226570(-)-12:131439049(-)__12_131418001_131443001D;SPAN=212479;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:29:18.2:18.2,0,54.5:0:8:-18.26:19.27\n12\t131268105\t654494:1\tG\tG]12:131402665]\t46\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=654494:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=12:131268105(+)-12:131402665(+)__12_131393501_131418501D;SPAN=134560;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:15:14:4.2:46.2,4.2,0:0:15:-46.21:46.21\n12\t131402665\t654494:2\tA\tA]12:131268105]\t46\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=654494:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=12:131268105(+)-12:131402665(+)__12_131393501_131418501D;SPAN=134560;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:15:14:4.2:46.2,4.2,0:0:15:-46.21:46.21\n12\t131432986\t654517:1\tT\t]12:131433079]T\t39\tPASS\tEVDNC=ASSMB;HOMSEQ=TCCTCTCCCCTGTGTCCCGGCATCCCCCGCAT;MAPQ=36;MATEID=654517:2;MATENM=4;NM=2;NUMPARTS=2;SCTG=c_12_131418001_131443001_65C;SPAN=93;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:13:13:3.6:39.6,3.6,0:13:0:-39.61:39.61\n12\t131433079\t654517:2\tT\tT[12:131432986[\t39\tPASS\tEVDNC=ASSMB;HOMSEQ=TCCTCTCCCCTGTGTCCCGGCATCCCCCGCAT;MAPQ=60;MATEID=654517:1;MATENM=2;NM=4;NUMPARTS=2;SCTG=c_12_131418001_131443001_65C;SPAN=93;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:13:13:3.6:39.6,3.6,0:13:0:-39.61:39.61\n12\t131439049\t654514:2\tC\t[12:131226570[C\t18\tPASS\tDISC_MAPQ=53;EVDNC=DSCRD;IMPRECISE;MAPQ=53;MATEID=654514:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=12:131226570(-)-12:131439049(-)__12_131418001_131443001D;SPAN=212479;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:29:18.2:18.2,0,54.5:0:8:-18.26:19.27\n12\t131613513\t654667:1\tT\tT]12:131633939]\t49\tPASS\tDISC_MAPQ=58;EVDNC=DSCRD;IMPRECISE;MAPQ=58;MATEID=654667:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=12:131613513(+)-12:131633939(+)__12_131614001_131639001D;SPAN=20426;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:17:17:4.5:49.5,4.5,0:0:17:-49.51:49.51\n12\t131614588\t654668:1\tC\t[12:131633895[C\t52\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=C;MAPQ=60;MATEID=654668:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_131614001_131639001_72C;SPAN=19307;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:18:18:4.8:52.8,4.8,0:8:11:-52.81:52.81\n12\t131633895\t654668:2\tG\t[12:131614588[G\t52\tPASS\tDISC_MAPQ=23;EVDNC=ASDIS;HOMSEQ=C;MAPQ=43;MATEID=654668:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_131614001_131639001_72C;SPAN=19307;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:18:18:4.8:52.8,4.8,0:8:11:-52.81:52.81\n12\t131633939\t654667:2\tC\tC]12:131613513]\t49\tPASS\tDISC_MAPQ=45;EVDNC=DSCRD;IMPRECISE;MAPQ=45;MATEID=654667:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=12:131613513(+)-12:131633939(+)__12_131614001_131639001D;SPAN=20426;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:17:17:4.5:49.5,4.5,0:0:17:-49.51:49.51\n12\t131779209\t654749:1\tG\t]12:131779312]G\t28\tPASS\tEVDNC=ASSMB;HOMSEQ=GTGTGTGAAGAGGGCGGCGC;MAPQ=25;MATEID=654749:2;MATENM=4;NM=1;NUMPARTS=2;SCTG=c_12_131761001_131786001_4C;SPAN=103;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:41:28.1:28.1,0,74.3:12:0:-28.09:29.28\n12\t131779312\t654749:2\tC\tC[12:131779209[\t28\tPASS\tEVDNC=ASSMB;HOMSEQ=GTGTGTGAAGAGGGCGGCGC;MAPQ=60;MATEID=654749:1;MATENM=1;NM=4;NUMPARTS=2;SCTG=c_12_131761001_131786001_4C;SPAN=103;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:41:28.1:28.1,0,74.3:12:0:-28.09:29.28\n12\t132397258\t654980:1\tG\t]12:132397846]G\t22\tPASS\tDISC_MAPQ=53;EVDNC=ASDIS;HOMSEQ=GCCCTCCCCGGGGCCCCTCCTGGGCTTTCACCTGCGTCTCTGGG;MAPQ=60;MATEID=654980:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_132373501_132398501_39C;SPAN=588;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:27:22.1:22.1,0,45.2:4:7:-22.12:22.58\n12\t132397846\t654980:2\tG\tG[12:132397258[\t22\tPASS\tDISC_MAPQ=56;EVDNC=ASDIS;HOMSEQ=GCCCTCCCCGGGGCCCCTCCTGGGCTTTCACCTGCGTCTCTGGG;MAPQ=60;MATEID=654980:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_132373501_132398501_39C;SPAN=588;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:27:22.1:22.1,0,45.2:4:7:-22.12:22.58\n12\t132411313\t654995:1\tC\t]12:132411391]C\t28\tPASS\tDISC_MAPQ=255;EVDNC=TSI_G;HOMSEQ=ACACGGGCACCCACACACACACA;INSERTION=CAACACAGGCCCACACGCACCCGTGCACACACAGGCCTCCCACACACACACAGGCACT;MAPQ=60;MATEID=654995:2;MATENM=5;NM=2;NUMPARTS=3;SCTG=c_12_132398001_132423001_44C;SPAN=78;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:41:28.1:28.1,0,74.3:12:0:-28.09:29.28\n12\t132411391\t654995:2\tA\tA[12:132411313[\t28\tPASS\tDISC_MAPQ=255;EVDNC=TSI_G;HOMSEQ=ACACGGGCACCCACACACACACA;INSERTION=CAACACAGGCCCACACGCACCCGTGCACACACAGGCCTCCCACACACACACAGGCACT;MAPQ=60;MATEID=654995:1;MATENM=2;NM=5;NUMPARTS=3;SCTG=c_12_132398001_132423001_44C;SPAN=78;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:41:28.1:28.1,0,74.3:12:0:-28.09:29.28\n12\t132473094\t655080:1\tT\tT[12:132474099[\t33\tPASS\tDISC_MAPQ=50;EVDNC=DSCRD;IMPRECISE;MAPQ=50;MATEID=655080:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=12:132473094(+)-12:132474099(-)__12_132471501_132496501D;SPAN=1005;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:11:13:0.3:33,0.3,0:0:11:-34.67:34.67\n12\t132474099\t655080:2\tT\t]12:132473094]T\t33\tPASS\tDISC_MAPQ=54;EVDNC=DSCRD;IMPRECISE;MAPQ=54;MATEID=655080:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=12:132473094(+)-12:132474099(-)__12_132471501_132496501D;SPAN=1005;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:11:13:0.3:33,0.3,0:0:11:-34.67:34.67\n12\t132474348\t655090:1\tC\t]12:132542292]C\t25\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=C;MAPQ=60;MATEID=655090:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_132520501_132545501_33C;SPAN=67944;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:26:25.7:25.7,0,38.9:7:8:-25.7:25.87\n12\t132542292\t655090:2\tC\tC[12:132474348[\t25\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=C;MAPQ=60;MATEID=655090:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_132520501_132545501_33C;SPAN=67944;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:26:25.7:25.7,0,38.9:7:8:-25.7:25.87\n12\t132742761\t655207:2\tC\t]1:6937887]C\t20\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=655207:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:6937887(+)-12:132742761(-)__12_132741001_132766001D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:35:20:20,0,66.2:0:9:-19.87:21.36\n13\t16000705\t655427:1\tA\tA[13:16006260[\t42\tPASS\tDISC_MAPQ=23;EVDNC=DSCRD;IMPRECISE;MAPQ=23;MATEID=655427:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16000705(+)-13:16006260(-)__13_15998501_16023501D;SPAN=5555;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:14:5:3.9:42.9,3.9,0:0:14:-42.91:42.91\n13\t16001321\t655429:1\tG\t]13:16018130]G\t0\tPASS\tDISC_MAPQ=41;EVDNC=DSCRD;IMPRECISE;MAPQ=41;MATEID=655429:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16001321(-)-13:16018130(+)__13_15998501_16023501D;SPAN=16809;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/0:16:276:24.4:0,24.4,742.6:0:16:24.77:26.82\n13\t16001617\t655434:1\tC\tC[13:16012944[\t7\tPASS\tDISC_MAPQ=25;EVDNC=DSCRD;IMPRECISE;MAPQ=25;MATEID=655434:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16001617(+)-13:16012944(-)__13_15998501_16023501D;SPAN=11327;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:91:7.7:7.7,0,218.9:0:10:-7.431:19.65\n13\t16002842\t655447:1\tT\t]13:16014050]T\t4\tPASS\tDISC_MAPQ=16;EVDNC=DSCRD;IMPRECISE;MAPQ=16;MATEID=655447:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16002842(-)-13:16014050(+)__13_15998501_16023501D;SPAN=11208;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:102:4.4:4.4,0,251.9:0:10:-4.339:19.13\n13\t16005128\t655459:1\tT\tT[13:16016361[\t47\tPASS\tDISC_MAPQ=18;EVDNC=DSCRD;IMPRECISE;MAPQ=18;MATEID=655459:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16005128(+)-13:16016361(-)__13_15998501_16023501D;SPAN=11233;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:22:88:47.9:47.9,0,173.3:0:22:-47.89:51.9\n13\t16006260\t655427:2\tG\t]13:16000705]G\t42\tPASS\tDISC_MAPQ=18;EVDNC=DSCRD;IMPRECISE;MAPQ=18;MATEID=655427:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16000705(+)-13:16006260(-)__13_15998501_16023501D;SPAN=5555;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:14:5:3.9:42.9,3.9,0:0:14:-42.91:42.91\n13\t16009131\t655481:1\tG\tG[13:16020430[\t41\tPASS\tDISC_MAPQ=29;EVDNC=DSCRD;IMPRECISE;MAPQ=29;MATEID=655481:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16009131(+)-13:16020430(-)__13_15998501_16023501D;SPAN=11299;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:16:42:41:41,0,64.1:0:16:-41.01:41.3\n13\t16010771\t655489:1\tA\tA[13:16016355[\t1\tPASS\tDISC_MAPQ=32;EVDNC=DSCRD;IMPRECISE;MAPQ=32;MATEID=655489:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16010771(+)-13:16016355(-)__13_15998501_16023501D;SPAN=5584;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:102:1.1:1.1,0,255.2:0:9:-1.038:16.79\n13\t16011227\t655498:1\tA\t]13:16022545]A\t0\tPASS\tDISC_MAPQ=19;EVDNC=DSCRD;IMPRECISE;MAPQ=19;MATEID=655498:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16011227(-)-13:16022545(+)__13_15998501_16023501D;SPAN=11318;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/0:16:195:1.9:0,1.9,495.1:0:16:1.997:29.32\n13\t16011579\t655500:1\tC\tC[13:16017146[\t0\tPASS\tDISC_MAPQ=29;EVDNC=DSCRD;IMPRECISE;MAPQ=29;MATEID=655500:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16011579(+)-13:16017146(-)__13_15998501_16023501D;SPAN=5567;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/0:13:221:19:0,19,594.1:0:13:19.21:21.88\n13\t16012944\t655434:2\tC\t]13:16001617]C\t7\tPASS\tDISC_MAPQ=17;EVDNC=DSCRD;IMPRECISE;MAPQ=17;MATEID=655434:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16001617(+)-13:16012944(-)__13_15998501_16023501D;SPAN=11327;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:91:7.7:7.7,0,218.9:0:10:-7.431:19.65\n13\t16013417\t892860:1\tG\t[21:7969771[G\t20\tPASS\tDISC_MAPQ=18;EVDNC=DSCRD;IMPRECISE;MAPQ=18;MATEID=892860:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16013417(-)-21:7969771(-)__21_7962501_7987501D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:35:20:20,0,66.2:0:9:-19.87:21.36\n13\t16013930\t655511:1\tG\t]13:16019632]G\t51\tPASS\tDISC_MAPQ=24;EVDNC=DSCRD;IMPRECISE;MAPQ=24;MATEID=655511:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16013930(-)-13:16019632(+)__13_15998501_16023501D;SPAN=5702;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:19:41:51.2:51.2,0,51.2:0:19:-51.19:51.2\n13\t16014050\t655447:2\tT\tT[13:16002842[\t4\tPASS\tDISC_MAPQ=28;EVDNC=DSCRD;IMPRECISE;MAPQ=28;MATEID=655447:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16002842(-)-13:16014050(+)__13_15998501_16023501D;SPAN=11208;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:102:4.4:4.4,0,251.9:0:10:-4.339:19.13\n13\t16014991\t655523:1\tA\t]13:16020652]A\t55\tPASS\tDISC_MAPQ=28;EVDNC=DSCRD;IMPRECISE;MAPQ=28;MATEID=655523:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16014991(-)-13:16020652(+)__13_15998501_16023501D;SPAN=5661;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:24:85:55.4:55.4,0,157.7:0:24:-55.33:58.11\n13\t16016339\t655526:1\tG\t]13:16022071]G\t98\tPASS\tDISC_MAPQ=31;EVDNC=DSCRD;IMPRECISE;MAPQ=31;MATEID=655526:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16016339(-)-13:16022071(+)__13_15998501_16023501D;SPAN=5732;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:36:73:85.1:98.3,0,85.1:0:36:-98.36:98.36\n13\t16016355\t655489:2\tG\t]13:16010771]G\t1\tPASS\tDISC_MAPQ=38;EVDNC=DSCRD;IMPRECISE;MAPQ=38;MATEID=655489:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16010771(+)-13:16016355(-)__13_15998501_16023501D;SPAN=5584;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:102:1.1:1.1,0,255.2:0:9:-1.038:16.79\n13\t16016361\t655459:2\tT\t]13:16005128]T\t47\tPASS\tDISC_MAPQ=33;EVDNC=DSCRD;IMPRECISE;MAPQ=33;MATEID=655459:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16005128(+)-13:16016361(-)__13_15998501_16023501D;SPAN=11233;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:22:88:47.9:47.9,0,173.3:0:22:-47.89:51.9\n13\t16016553\t896677:1\tG\t]21:10789057]G\t82\tPASS\tDISC_MAPQ=255;EVDNC=ASDIS;HOMSEQ=GAAGCATTCTGAGAAACTTCTTT;MAPQ=60;MATEID=896677:2;MATENM=14;NM=0;NUMPARTS=2;SCTG=c_21_10780001_10805001_326C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:33:95:82.4:82.4,0,155:11:22:-82.23:83.51\n13\t16016588\t655540:1\tT\tT[13:16022261[\t36\tPASS\tDISC_MAPQ=29;EVDNC=DSCRD;IMPRECISE;MAPQ=29;MATEID=655540:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16016588(+)-13:16022261(-)__13_15998501_16023501D;SPAN=5673;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:21:116:36.8:36.8,0,254.6:0:21:-36.71:46.2\n13\t16017146\t655500:2\tC\t]13:16011579]C\t0\tPASS\tDISC_MAPQ=18;EVDNC=DSCRD;IMPRECISE;MAPQ=18;MATEID=655500:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16011579(+)-13:16017146(-)__13_15998501_16023501D;SPAN=5567;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/0:13:221:19:0,19,594.1:0:13:19.21:21.88\n13\t16018130\t655429:2\tG\tG[13:16001321[\t0\tPASS\tDISC_MAPQ=33;EVDNC=DSCRD;IMPRECISE;MAPQ=33;MATEID=655429:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16001321(-)-13:16018130(+)__13_15998501_16023501D;SPAN=16809;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/0:16:276:24.4:0,24.4,742.6:0:16:24.77:26.82\n13\t16019632\t655511:2\tA\tA[13:16013930[\t51\tPASS\tDISC_MAPQ=26;EVDNC=DSCRD;IMPRECISE;MAPQ=26;MATEID=655511:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16013930(-)-13:16019632(+)__13_15998501_16023501D;SPAN=5702;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:19:41:51.2:51.2,0,51.2:0:19:-51.19:51.2\n13\t16020430\t655481:2\tG\t]13:16009131]G\t41\tPASS\tDISC_MAPQ=21;EVDNC=DSCRD;IMPRECISE;MAPQ=21;MATEID=655481:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16009131(+)-13:16020430(-)__13_15998501_16023501D;SPAN=11299;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:16:42:41:41,0,64.1:0:16:-41.01:41.3\n13\t16020652\t655523:2\tG\tG[13:16014991[\t55\tPASS\tDISC_MAPQ=20;EVDNC=DSCRD;IMPRECISE;MAPQ=20;MATEID=655523:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16014991(-)-13:16020652(+)__13_15998501_16023501D;SPAN=5661;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:24:85:55.4:55.4,0,157.7:0:24:-55.33:58.11\n13\t16022071\t655526:2\tG\tG[13:16016339[\t98\tPASS\tDISC_MAPQ=19;EVDNC=DSCRD;IMPRECISE;MAPQ=19;MATEID=655526:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16016339(-)-13:16022071(+)__13_15998501_16023501D;SPAN=5732;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:36:73:85.1:98.3,0,85.1:0:36:-98.36:98.36\n13\t16022261\t655540:2\tA\t]13:16016588]A\t36\tPASS\tDISC_MAPQ=34;EVDNC=DSCRD;IMPRECISE;MAPQ=34;MATEID=655540:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16016588(+)-13:16022261(-)__13_15998501_16023501D;SPAN=5673;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:21:116:36.8:36.8,0,254.6:0:21:-36.71:46.2\n13\t16022545\t655498:2\tN\tN[13:16011227[\t0\tPASS\tDISC_MAPQ=56;EVDNC=DSCRD;IMPRECISE;MAPQ=56;MATEID=655498:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16011227(-)-13:16022545(+)__13_15998501_16023501D;SPAN=11318;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/0:16:195:1.9:0,1.9,495.1:0:16:1.997:29.32\n13\t16031321\t655617:1\tA\t]13:16057058]A\t39\tPASS\tDISC_MAPQ=21;EVDNC=DSCRD;IMPRECISE;MAPQ=21;MATEID=655617:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16031321(-)-13:16057058(+)__13_16047501_16072501D;SPAN=25737;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:13:10:3.6:39.6,3.6,0:0:13:-39.61:39.61\n13\t16057058\t655617:2\tT\tT[13:16031321[\t39\tPASS\tDISC_MAPQ=58;EVDNC=DSCRD;IMPRECISE;MAPQ=58;MATEID=655617:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16031321(-)-13:16057058(+)__13_16047501_16072501D;SPAN=25737;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:13:10:3.6:39.6,3.6,0:0:13:-39.61:39.61\n13\t16125492\t656014:1\tC\t]13:16163215]C\t43\tPASS\tDISC_MAPQ=24;EVDNC=DSCRD;IMPRECISE;MAPQ=24;MATEID=656014:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16125492(-)-13:16163215(+)__13_16145501_16170501D;SPAN=37723;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:16:34:40.1:43.4,0,40.1:0:16:-43.26:43.26\n13\t16127862\t655887:1\tA\t]13:16145009]A\t0\tPASS\tDISC_MAPQ=19;EVDNC=DSCRD;IMPRECISE;MAPQ=19;MATEID=655887:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16127862(-)-13:16145009(+)__13_16121001_16146001D;SPAN=17147;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/0:9:317:59.3:0,59.3,917.6:0:9:59.4:12.27\n13\t16145009\t655887:2\tT\tT[13:16127862[\t0\tPASS\tDISC_MAPQ=34;EVDNC=DSCRD;IMPRECISE;MAPQ=34;MATEID=655887:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16127862(-)-13:16145009(+)__13_16121001_16146001D;SPAN=17147;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/0:9:317:59.3:0,59.3,917.6:0:9:59.4:12.27\n13\t16163215\t656014:2\tT\tT[13:16125492[\t43\tPASS\tDISC_MAPQ=32;EVDNC=DSCRD;IMPRECISE;MAPQ=32;MATEID=656014:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16125492(-)-13:16163215(+)__13_16145501_16170501D;SPAN=37723;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:16:34:40.1:43.4,0,40.1:0:16:-43.26:43.26\n13\t16166518\t656143:1\tC\t]13:16177110]C\t26\tPASS\tDISC_MAPQ=19;EVDNC=DSCRD;IMPRECISE;MAPQ=19;MATEID=656143:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16166518(-)-13:16177110(+)__13_16145501_16170501D;SPAN=10592;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:9:4:2.4:26.4,2.4,0:0:9:-26.41:26.41\n13\t16176791\t656569:1\tC\t]13:16177450]C\t18\tPASS\tDISC_MAPQ=26;EVDNC=DSCRD;IMPRECISE;MAPQ=26;MATEID=656569:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16176791(-)-13:16177450(+)__13_16170001_16195001D;SPAN=659;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:40:18.5:18.5,0,81.2:0:9:-18.47:20.76\n13\t16177110\t656143:2\tG\tG[13:16166518[\t26\tPASS\tDISC_MAPQ=25;EVDNC=DSCRD;IMPRECISE;MAPQ=25;MATEID=656143:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16166518(-)-13:16177110(+)__13_16145501_16170501D;SPAN=10592;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:9:4:2.4:26.4,2.4,0:0:9:-26.41:26.41\n13\t16177450\t656569:2\tG\tG[13:16176791[\t18\tPASS\tDISC_MAPQ=31;EVDNC=DSCRD;IMPRECISE;MAPQ=31;MATEID=656569:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16176791(-)-13:16177450(+)__13_16170001_16195001D;SPAN=659;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:40:18.5:18.5,0,81.2:0:9:-18.47:20.76\n13\t16182447\t656725:1\tA\t]13:16182808]A\t65\tPASS\tDISC_MAPQ=3;EVDNC=ASDIS;HOMSEQ=ATAAAAACTAGACAGAAGA;MAPQ=14;MATEID=656725:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_13_16170001_16195001_257C;SPAN=361;SUBN=3;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:25:61:65.6:65.6,0,85.4:23:3:-65.38:65.57\n13\t16182808\t656725:2\tA\tA[13:16182447[\t65\tPASS\tDISC_MAPQ=4;EVDNC=ASDIS;HOMSEQ=ATAAAAACTAGACAGAAGA;MAPQ=60;MATEID=656725:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_13_16170001_16195001_257C;SPAN=361;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:25:61:65.6:65.6,0,85.4:23:3:-65.38:65.57\n13\t16256480\t658420:1\tG\t]13:16259419]G\t72\tPASS\tDISC_MAPQ=27;EVDNC=DSCRD;IMPRECISE;MAPQ=27;MATEID=658420:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16256480(-)-13:16259419(+)__13_16243501_16268501D;SPAN=2939;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:24:20:6.6:72.6,6.6,0:0:24:-72.62:72.62\n13\t16259044\t658453:1\tA\t[20:28781252[A\t92\tPASS\tDISC_MAPQ=4;EVDNC=ASDIS;HOMSEQ=TCAGAATGCTTCTGTGTAGTTTTTTTGTGAAGATATTT;MAPQ=38;MATEID=658453:2;MATENM=1;NM=7;NUMPARTS=2;SCTG=c_13_16243501_16268501_360C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:30:10:8.4:92.4,8.4,0:21:9:-92.42:92.42\n13\t16259419\t658420:2\tN\tN[13:16256480[\t72\tPASS\tDISC_MAPQ=30;EVDNC=DSCRD;IMPRECISE;MAPQ=30;MATEID=658420:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16256480(-)-13:16259419(+)__13_16243501_16268501D;SPAN=2939;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:24:20:6.6:72.6,6.6,0:0:24:-72.62:72.62\n13\t16271398\t658578:1\tA\tA[13:16274326[\t2\tPASS\tDISC_MAPQ=40;EVDNC=DSCRD;IMPRECISE;MAPQ=40;MATEID=658578:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16271398(+)-13:16274326(-)__13_16268001_16293001D;SPAN=2928;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:87:2:2,0,216.5:0:8:-1.953:15.07\n13\t16271442\t658579:1\tA\tA[13:16277305[\t69\tPASS\tDISC_MAPQ=36;EVDNC=DSCRD;IMPRECISE;MAPQ=36;MATEID=658579:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16271442(+)-13:16277305(-)__13_16268001_16293001D;SPAN=5863;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:21:23:6.3:69.3,6.3,0:0:21:-68.32:68.32\n13\t16271831\t658587:1\tC\tC[13:16274694[\t17\tPASS\tDISC_MAPQ=19;EVDNC=DSCRD;IMPRECISE;MAPQ=19;MATEID=658587:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16271831(+)-13:16274694(-)__13_16268001_16293001D;SPAN=2863;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:44:17.3:17.3,0,93.2:0:9:-17.34:20.33\n13\t16274326\t658578:2\tA\t]13:16271398]A\t2\tPASS\tDISC_MAPQ=19;EVDNC=DSCRD;IMPRECISE;MAPQ=19;MATEID=658578:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16271398(+)-13:16274326(-)__13_16268001_16293001D;SPAN=2928;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:87:2:2,0,216.5:0:8:-1.953:15.07\n13\t16274694\t658587:2\tG\t]13:16271831]G\t17\tPASS\tDISC_MAPQ=23;EVDNC=DSCRD;IMPRECISE;MAPQ=23;MATEID=658587:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16271831(+)-13:16274694(-)__13_16268001_16293001D;SPAN=2863;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:44:17.3:17.3,0,93.2:0:9:-17.34:20.33\n13\t16277305\t658579:2\tT\t]13:16271442]T\t69\tPASS\tDISC_MAPQ=32;EVDNC=DSCRD;IMPRECISE;MAPQ=32;MATEID=658579:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16271442(+)-13:16277305(-)__13_16268001_16293001D;SPAN=5863;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:21:23:6.3:69.3,6.3,0:0:21:-68.32:68.32\n13\t16279161\t658601:1\tC\t]13:16280739]C\t42\tPASS\tDISC_MAPQ=47;EVDNC=DSCRD;IMPRECISE;MAPQ=47;MATEID=658601:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16279161(-)-13:16280739(+)__13_16268001_16293001D;SPAN=1578;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:14:10:3.9:42.9,3.9,0:0:14:-42.91:42.91\n13\t16280739\t658601:2\tG\tG[13:16279161[\t42\tPASS\tDISC_MAPQ=30;EVDNC=DSCRD;IMPRECISE;MAPQ=30;MATEID=658601:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16279161(-)-13:16280739(+)__13_16268001_16293001D;SPAN=1578;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:14:10:3.9:42.9,3.9,0:0:14:-42.91:42.91\n13\t16293214\t658722:1\tT\t]13:16345186]T\t46\tPASS\tDISC_MAPQ=16;EVDNC=DSCRD;IMPRECISE;MAPQ=16;MATEID=658722:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16293214(-)-13:16345186(+)__13_16341501_16366501D;SPAN=51972;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:15:10:4.2:46.2,4.2,0:0:15:-46.21:46.21\n13\t16293475\t659043:1\tT\tT[13:16624297[\t23\tPASS\tDISC_MAPQ=23;EVDNC=DSCRD;IMPRECISE;MAPQ=23;MATEID=659043:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16293475(+)-13:16624297(-)__13_16611001_16636001D;SPAN=330822;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:21:23.9:23.9,0,27.2:0:9:-23.81:23.84\n13\t16298838\t658649:1\tT\tT[13:16678833[\t33\tPASS\tDISC_MAPQ=30;EVDNC=DSCRD;IMPRECISE;MAPQ=30;MATEID=658649:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16298838(+)-13:16678833(-)__13_16292501_16317501D;SPAN=379995;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:22:20.3:33.5,0,20.3:0:12:-33.55:33.55\n13\t16326610\t659640:1\tG\t]13:17149141]G\t58\tPASS\tDISC_MAPQ=37;EVDNC=DSCRD;IMPRECISE;MAPQ=37;MATEID=659640:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16326610(-)-13:17149141(+)__13_17125501_17150501D;SPAN=822531;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:21:39:38.6:58.4,0,38.6:0:21:-58.54:58.54\n13\t16326671\t659080:1\tA\t]13:16653519]A\t18\tPASS\tDISC_MAPQ=43;EVDNC=DSCRD;IMPRECISE;MAPQ=43;MATEID=659080:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16326671(-)-13:16653519(+)__13_16635501_16660501D;SPAN=326848;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:29:18.2:18.2,0,54.5:0:8:-18.26:19.27\n13\t16326907\t658726:1\tT\tT[13:16358236[\t52\tPASS\tDISC_MAPQ=48;EVDNC=DSCRD;IMPRECISE;MAPQ=48;MATEID=658726:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16326907(+)-13:16358236(-)__13_16341501_16366501D;SPAN=31329;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:18:24:6.5:52.7,0,6.5:0:18:-54.59:54.59\n13\t16344756\t658734:1\tA\t]13:16358491]A\t89\tPASS\tDISC_MAPQ=28;EVDNC=DSCRD;IMPRECISE;MAPQ=28;MATEID=658734:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16344756(-)-13:16358491(+)__13_16341501_16366501D;SPAN=13735;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:29:21:8.1:89.1,8.1,0:0:29:-89.12:89.12\n13\t16345186\t658722:2\tC\tC[13:16293214[\t46\tPASS\tDISC_MAPQ=27;EVDNC=DSCRD;IMPRECISE;MAPQ=27;MATEID=658722:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16293214(-)-13:16345186(+)__13_16341501_16366501D;SPAN=51972;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:15:10:4.2:46.2,4.2,0:0:15:-46.21:46.21\n13\t16345189\t659048:1\tT\tT[13:16624249[\t75\tPASS\tDISC_MAPQ=15;EVDNC=DSCRD;IMPRECISE;MAPQ=15;MATEID=659048:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16345189(+)-13:16624249(-)__13_16611001_16636001D;SPAN=279060;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:25:7:6.9:75.9,6.9,0:0:25:-75.92:75.92\n13\t16358236\t658726:2\tA\t]13:16326907]A\t52\tPASS\tDISC_MAPQ=54;EVDNC=DSCRD;IMPRECISE;MAPQ=54;MATEID=658726:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16326907(+)-13:16358236(-)__13_16341501_16366501D;SPAN=31329;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:18:24:6.5:52.7,0,6.5:0:18:-54.59:54.59\n13\t16358491\t658734:2\tT\tT[13:16344756[\t89\tPASS\tDISC_MAPQ=55;EVDNC=DSCRD;IMPRECISE;MAPQ=55;MATEID=658734:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16344756(-)-13:16358491(+)__13_16341501_16366501D;SPAN=13735;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:29:21:8.1:89.1,8.1,0:0:29:-89.12:89.12\n13\t16385294\t659116:1\tG\t]13:16679290]G\t26\tPASS\tDISC_MAPQ=29;EVDNC=DSCRD;IMPRECISE;MAPQ=29;MATEID=659116:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16385294(-)-13:16679290(+)__13_16660001_16685001D;SPAN=293996;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:9:1:2.4:26.4,2.4,0:0:9:-26.41:26.41\n13\t16426078\t659443:1\tG\tG[13:16940860[\t0\tPASS\tDISC_MAPQ=21;EVDNC=DSCRD;IMPRECISE;MAPQ=21;MATEID=659443:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16426078(+)-13:16940860(-)__13_16929501_16954501D;SPAN=514782;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/0:8:95:0:0,0,237.6:0:8:0.2957:14.75\n13\t16427155\t659118:1\tG\tG[13:16678845[\t25\tPASS\tDISC_MAPQ=38;EVDNC=DSCRD;IMPRECISE;MAPQ=38;MATEID=659118:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16427155(+)-13:16678845(-)__13_16660001_16685001D;SPAN=251690;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:14:9.2:25.7,0,9.2:0:9:-26.19:26.19\n13\t16507002\t658964:1\tT\tT[13:17299846[\t29\tPASS\tDISC_MAPQ=28;EVDNC=DSCRD;IMPRECISE;MAPQ=28;MATEID=658964:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16507002(+)-13:17299846(-)__13_16488501_16513501D;SPAN=792844;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:47:29.9:29.9,0,86:0:13:-29.7:31.34\n13\t16526723\t658974:1\tA\t]13:17086687]A\t99\tPASS\tDISC_MAPQ=44;EVDNC=ASDIS;HOMSEQ=AAAAGCAAATATCTTCCCATAAACACTAGACAGAAACATTCTCAGAAACTTCTTTATGA;MAPQ=60;MATEID=658974:2;MATENM=0;NM=4;NUMPARTS=2;SCTG=c_13_16513001_16538001_654C;SPAN=559964;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:53:29:14.7:161.7,14.7,0:32:23:-161.7:161.7\n13\t16526965\t658976:1\tA\tA[13:17146679[\t44\tPASS\tDISC_MAPQ=55;EVDNC=DSCRD;IMPRECISE;MAPQ=55;MATEID=658976:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16526965(+)-13:17146679(-)__13_16513001_16538001D;SPAN=619714;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:17:43:44:44,0,63.8:0:17:-44.03:44.24\n13\t16526973\t658977:1\tA\tA[13:16603430[\t14\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=658977:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16526973(+)-13:16603430(-)__13_16513001_16538001D;SPAN=76457;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:41:14.9:14.9,0,87.5:0:8:-14.88:17.89\n13\t16527034\t658978:1\tG\tG[13:16906930[\t46\tPASS\tDISC_MAPQ=33;EVDNC=DSCRD;IMPRECISE;MAPQ=33;MATEID=658978:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16527034(+)-13:16906930(-)__13_16513001_16538001D;SPAN=379896;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:16:14:4.2:46.2,4.2,0:0:16:-46.21:46.21\n13\t16551507\t658998:1\tC\tC[13:16871236[\t82\tPASS\tDISC_MAPQ=8;EVDNC=ASDIS;HOMSEQ=TTGGAAACGGGAATATCTTCATATCAAATCTAGACAGAAGCATTCTCAGAAAC;MAPQ=14;MATEID=658998:2;MATENM=0;NM=3;NUMPARTS=2;SCTG=c_13_16537501_16562501_35C;SPAN=319729;SUBN=2;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:27:12:7.5:82.5,7.5,0:26:2:-82.52:82.52\n13\t16603430\t658977:2\tA\t]13:16526973]A\t14\tPASS\tDISC_MAPQ=17;EVDNC=DSCRD;IMPRECISE;MAPQ=17;MATEID=658977:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16526973(+)-13:16603430(-)__13_16513001_16538001D;SPAN=76457;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:41:14.9:14.9,0,87.5:0:8:-14.88:17.89\n13\t16618050\t659056:1\tA\tA[13:16631536[\t6\tPASS\tDISC_MAPQ=17;EVDNC=DSCRD;IMPRECISE;MAPQ=17;MATEID=659056:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16618050(+)-13:16631536(-)__13_16611001_16636001D;SPAN=13486;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:83:6.5:6.5,0,201.2:0:9:-6.378:17.63\n13\t16624236\t659222:1\tT\t]13:16726447]T\t47\tPASS\tDISC_MAPQ=46;EVDNC=DSCRD;IMPRECISE;MAPQ=46;MATEID=659222:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16624236(-)-13:16726447(+)__13_16709001_16734001D;SPAN=102211;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:16:21:4.1:47,0,4.1:0:16:-48.75:48.75\n13\t16624249\t659048:2\tT\t]13:16345189]T\t75\tPASS\tDISC_MAPQ=43;EVDNC=DSCRD;IMPRECISE;MAPQ=43;MATEID=659048:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16345189(+)-13:16624249(-)__13_16611001_16636001D;SPAN=279060;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:25:7:6.9:75.9,6.9,0:0:25:-75.92:75.92\n13\t16624297\t659043:2\tT\t]13:16293475]T\t23\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=659043:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16293475(+)-13:16624297(-)__13_16611001_16636001D;SPAN=330822;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:21:23.9:23.9,0,27.2:0:9:-23.81:23.84\n13\t16624499\t659339:1\tT\tT[13:16857426[\t0\tPASS\tDISC_MAPQ=16;EVDNC=DSCRD;IMPRECISE;MAPQ=16;MATEID=659339:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16624499(+)-13:16857426(-)__13_16856001_16881001D;SPAN=232927;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/0:8:104:2.7:0,2.7,267.3:0:8:2.826:14.43\n13\t16624711\t659065:1\tC\tC[13:17396031[\t28\tPASS\tDISC_MAPQ=20;EVDNC=DSCRD;IMPRECISE;MAPQ=20;MATEID=659065:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16624711(+)-13:17396031(-)__13_16611001_16636001D;SPAN=771320;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:18:14.9:28.1,0,14.9:0:10:-28.08:28.08\n13\t16631536\t659056:2\tC\t]13:16618050]C\t6\tPASS\tDISC_MAPQ=17;EVDNC=DSCRD;IMPRECISE;MAPQ=17;MATEID=659056:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16618050(+)-13:16631536(-)__13_16611001_16636001D;SPAN=13486;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:83:6.5:6.5,0,201.2:0:9:-6.378:17.63\n13\t16653519\t659080:2\tA\tA[13:16326671[\t18\tPASS\tDISC_MAPQ=51;EVDNC=DSCRD;IMPRECISE;MAPQ=51;MATEID=659080:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16326671(-)-13:16653519(+)__13_16635501_16660501D;SPAN=326848;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:29:18.2:18.2,0,54.5:0:8:-18.26:19.27\n13\t16656410\t659717:1\tA\tA[13:17209367[\t18\tPASS\tDISC_MAPQ=19;EVDNC=DSCRD;IMPRECISE;MAPQ=19;MATEID=659717:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16656410(+)-13:17209367(-)__13_17199001_17224001D;SPAN=552957;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:63:18.8:18.8,0,137.6:0:11:-18.6:24.01\n13\t16665301\t659226:1\tT\tT[13:16710945[\t56\tPASS\tDISC_MAPQ=34;EVDNC=ASDIS;HOMSEQ=AGCATCCTCAGAAACTTCTTTGTGATGTGTGCATTCAAGTCACAGAGTTGAACATT;MAPQ=60;MATEID=659226:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_13_16709001_16734001_661C;SPAN=45644;SUBN=4;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:19:8:5.1:56.1,5.1,0:16:8:-56.11:56.11\n13\t16678833\t658649:2\tT\t]13:16298838]T\t33\tPASS\tDISC_MAPQ=17;EVDNC=DSCRD;IMPRECISE;MAPQ=17;MATEID=658649:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16298838(+)-13:16678833(-)__13_16292501_16317501D;SPAN=379995;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:22:20.3:33.5,0,20.3:0:12:-33.55:33.55\n13\t16678845\t659118:2\tT\t]13:16427155]T\t25\tPASS\tDISC_MAPQ=26;EVDNC=DSCRD;IMPRECISE;MAPQ=26;MATEID=659118:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16427155(+)-13:16678845(-)__13_16660001_16685001D;SPAN=251690;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:14:9.2:25.7,0,9.2:0:9:-26.19:26.19\n13\t16679290\t659116:2\tG\tG[13:16385294[\t26\tPASS\tDISC_MAPQ=52;EVDNC=DSCRD;IMPRECISE;MAPQ=52;MATEID=659116:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16385294(-)-13:16679290(+)__13_16660001_16685001D;SPAN=293996;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:9:1:2.4:26.4,2.4,0:0:9:-26.41:26.41\n13\t16697718\t659900:1\tA\tA[13:17361102[\t89\tPASS\tDISC_MAPQ=56;EVDNC=DSCRD;IMPRECISE;MAPQ=56;MATEID=659900:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16697718(+)-13:17361102(-)__13_17346001_17371001D;SPAN=663384;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:29:5:8.1:89.1,8.1,0:0:29:-89.12:89.12\n13\t16697740\t659651:1\tA\tA[13:17148635[\t16\tPASS\tDISC_MAPQ=38;EVDNC=DSCRD;IMPRECISE;MAPQ=38;MATEID=659651:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16697740(+)-13:17148635(-)__13_17125501_17150501D;SPAN=450895;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:35:16.7:16.7,0,69.5:0:8:-16.57:18.51\n13\t16710945\t659226:2\tA\t]13:16665301]A\t56\tPASS\tDISC_MAPQ=46;EVDNC=ASDIS;HOMSEQ=AGCATCCTCAGAAACTTCTTTGTGATGTGTGCATTCAAGTCACAGAGTTGAACATT;MAPQ=60;MATEID=659226:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_13_16709001_16734001_661C;SPAN=45644;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:19:8:5.1:56.1,5.1,0:16:8:-56.11:56.11\n13\t16726447\t659222:2\tT\tT[13:16624236[\t47\tPASS\tDISC_MAPQ=16;EVDNC=DSCRD;IMPRECISE;MAPQ=16;MATEID=659222:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16624236(-)-13:16726447(+)__13_16709001_16734001D;SPAN=102211;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:16:21:4.1:47,0,4.1:0:16:-48.75:48.75\n13\t16825242\t659506:1\tA\tA[13:17018409[\t31\tPASS\tDISC_MAPQ=25;EVDNC=DSCRD;IMPRECISE;MAPQ=25;MATEID=659506:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16825242(+)-13:17018409(-)__13_17003001_17028001D;SPAN=193167;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:28:31.7:31.7,0,38.3:0:12:-31.74:31.78\n13\t16844805\t659821:1\tA\t]13:17287651]A\t46\tPASS\tDISC_MAPQ=28;EVDNC=DSCRD;IMPRECISE;MAPQ=28;MATEID=659821:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16844805(-)-13:17287651(+)__13_17272501_17297501D;SPAN=442846;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:15:6:4.2:46.2,4.2,0:0:15:-46.21:46.21\n13\t16845061\t659349:1\tA\tA[13:16857396[\t28\tPASS\tDISC_MAPQ=25;EVDNC=DSCRD;IMPRECISE;MAPQ=25;MATEID=659349:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16845061(+)-13:16857396(-)__13_16856001_16881001D;SPAN=12335;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:17:100:28.1:28.1,0,222.8:0:17:-28.01:36.89\n13\t16857396\t659349:2\tA\t]13:16845061]A\t28\tPASS\tDISC_MAPQ=42;EVDNC=DSCRD;IMPRECISE;MAPQ=42;MATEID=659349:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16845061(+)-13:16857396(-)__13_16856001_16881001D;SPAN=12335;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:17:100:28.1:28.1,0,222.8:0:17:-28.01:36.89\n13\t16857426\t659339:2\tA\t]13:16624499]A\t0\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=659339:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16624499(+)-13:16857426(-)__13_16856001_16881001D;SPAN=232927;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/0:8:104:2.7:0,2.7,267.3:0:8:2.826:14.43\n13\t16871236\t658998:2\tT\t]13:16551507]T\t82\tPASS\tDISC_MAPQ=40;EVDNC=ASDIS;HOMSEQ=TTGGAAACGGGAATATCTTCATATCAAATCTAGACAGAAGCATTCTCAGAAAC;MAPQ=48;MATEID=658998:1;MATENM=3;NM=0;NUMPARTS=2;SCTG=c_13_16537501_16562501_35C;SPAN=319729;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:27:12:7.5:82.5,7.5,0:26:2:-82.52:82.52\n13\t16871482\t659378:1\tG\tG[13:16894583[\t56\tPASS\tDISC_MAPQ=22;EVDNC=DSCRD;IMPRECISE;MAPQ=22;MATEID=659378:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16871482(+)-13:16894583(-)__13_16880501_16905501D;SPAN=23101;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:19:6:5.1:56.1,5.1,0:0:19:-56.11:56.11\n13\t16894583\t659378:2\tC\t]13:16871482]C\t56\tPASS\tDISC_MAPQ=30;EVDNC=DSCRD;IMPRECISE;MAPQ=30;MATEID=659378:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16871482(+)-13:16894583(-)__13_16880501_16905501D;SPAN=23101;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:19:6:5.1:56.1,5.1,0:0:19:-56.11:56.11\n13\t16906905\t659652:1\tT\t]13:17146944]T\t66\tPASS\tDISC_MAPQ=28;EVDNC=DSCRD;IMPRECISE;MAPQ=28;MATEID=659652:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16906905(-)-13:17146944(+)__13_17125501_17150501D;SPAN=240039;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:22:1:6:66,6,0:0:22:-66.02:66.02\n13\t16906930\t658978:2\tG\t]13:16527034]G\t46\tPASS\tDISC_MAPQ=31;EVDNC=DSCRD;IMPRECISE;MAPQ=31;MATEID=658978:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16527034(+)-13:16906930(-)__13_16513001_16538001D;SPAN=379896;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:16:14:4.2:46.2,4.2,0:0:16:-46.21:46.21\n13\t16911984\t659530:1\tT\t]13:17039999]T\t71\tPASS\tDISC_MAPQ=39;EVDNC=DSCRD;IMPRECISE;MAPQ=39;MATEID=659530:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16911984(-)-13:17039999(+)__13_17027501_17052501D;SPAN=128015;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:26:51:55.1:71.6,0,55.1:0:26:-71.58:71.58\n13\t16940860\t659443:2\tA\t]13:16426078]A\t0\tPASS\tDISC_MAPQ=29;EVDNC=DSCRD;IMPRECISE;MAPQ=29;MATEID=659443:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16426078(+)-13:16940860(-)__13_16929501_16954501D;SPAN=514782;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/0:8:95:0:0,0,237.6:0:8:0.2957:14.75\n13\t17018409\t659506:2\tG\t]13:16825242]G\t31\tPASS\tDISC_MAPQ=33;EVDNC=DSCRD;IMPRECISE;MAPQ=33;MATEID=659506:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16825242(+)-13:17018409(-)__13_17003001_17028001D;SPAN=193167;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:28:31.7:31.7,0,38.3:0:12:-31.74:31.78\n13\t17039999\t659530:2\tT\tT[13:16911984[\t71\tPASS\tDISC_MAPQ=44;EVDNC=DSCRD;IMPRECISE;MAPQ=44;MATEID=659530:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16911984(-)-13:17039999(+)__13_17027501_17052501D;SPAN=128015;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:26:51:55.1:71.6,0,55.1:0:26:-71.58:71.58\n13\t17086687\t658974:2\tA\tA[13:16526723[\t99\tPASS\tDISC_MAPQ=46;EVDNC=ASDIS;HOMSEQ=AAAAGCAAATATCTTCCCATAAACACTAGACAGAAACATTCTCAGAAACTTCTTTATGA;MAPQ=60;MATEID=658974:1;MATENM=4;NM=0;NUMPARTS=2;SCTG=c_13_16513001_16538001_654C;SPAN=559964;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:53:29:14.7:161.7,14.7,0:32:23:-161.7:161.7\n13\t17146679\t658976:2\tC\t]13:16526965]C\t44\tPASS\tDISC_MAPQ=37;EVDNC=DSCRD;IMPRECISE;MAPQ=37;MATEID=658976:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16526965(+)-13:17146679(-)__13_16513001_16538001D;SPAN=619714;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:17:43:44:44,0,63.8:0:17:-44.03:44.24\n13\t17146944\t659652:2\tG\tG[13:16906905[\t66\tPASS\tDISC_MAPQ=27;EVDNC=DSCRD;IMPRECISE;MAPQ=27;MATEID=659652:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16906905(-)-13:17146944(+)__13_17125501_17150501D;SPAN=240039;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:22:1:6:66,6,0:0:22:-66.02:66.02\n13\t17148635\t659651:2\tG\t]13:16697740]G\t16\tPASS\tDISC_MAPQ=54;EVDNC=DSCRD;IMPRECISE;MAPQ=54;MATEID=659651:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16697740(+)-13:17148635(-)__13_17125501_17150501D;SPAN=450895;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:35:16.7:16.7,0,69.5:0:8:-16.57:18.51\n13\t17149141\t659640:2\tT\tT[13:16326610[\t58\tPASS\tDISC_MAPQ=49;EVDNC=DSCRD;IMPRECISE;MAPQ=49;MATEID=659640:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16326610(-)-13:17149141(+)__13_17125501_17150501D;SPAN=822531;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:21:39:38.6:58.4,0,38.6:0:21:-58.54:58.54\n13\t17209367\t659717:2\tT\t]13:16656410]T\t18\tPASS\tDISC_MAPQ=21;EVDNC=DSCRD;IMPRECISE;MAPQ=21;MATEID=659717:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16656410(+)-13:17209367(-)__13_17199001_17224001D;SPAN=552957;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:63:18.8:18.8,0,137.6:0:11:-18.6:24.01\n13\t17268150\t659806:1\tT\t]13:17268348]T\t99\tPASS\tEVDNC=ASSMB;INSERTION=AAAAATCTTCCCCTACAACG;MAPQ=60;MATEID=659806:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_13_17248001_17273001_239C;SPAN=198;SUBN=1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:45:89:99:123.5,0,100.4:45:0:-123.7:123.7\n13\t17268348\t659806:2\tT\tT[13:17268150[\t99\tPASS\tEVDNC=ASSMB;INSERTION=AAAAATCTTCCCCTACAACG;MAPQ=60;MATEID=659806:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_13_17248001_17273001_239C;SPAN=198;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:45:89:99:123.5,0,100.4:45:0:-123.7:123.7\n13\t17287315\t659890:1\tT\t]13:17328244]T\t29\tPASS\tDISC_MAPQ=23;EVDNC=DSCRD;IMPRECISE;MAPQ=23;MATEID=659890:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:17287315(-)-13:17328244(+)__13_17321501_17346501D;SPAN=40929;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:10:8:2.7:29.7,2.7,0:0:10:-29.71:29.71\n13\t17287651\t659821:2\tT\tT[13:16844805[\t46\tPASS\tDISC_MAPQ=22;EVDNC=DSCRD;IMPRECISE;MAPQ=22;MATEID=659821:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16844805(-)-13:17287651(+)__13_17272501_17297501D;SPAN=442846;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:15:6:4.2:46.2,4.2,0:0:15:-46.21:46.21\n13\t17299846\t658964:2\tA\t]13:16507002]A\t29\tPASS\tDISC_MAPQ=40;EVDNC=DSCRD;IMPRECISE;MAPQ=40;MATEID=658964:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16507002(+)-13:17299846(-)__13_16488501_16513501D;SPAN=792844;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:47:29.9:29.9,0,86:0:13:-29.7:31.34\n13\t17328012\t659892:1\tC\t]13:17396311]C\t38\tPASS\tDISC_MAPQ=29;EVDNC=DSCRD;IMPRECISE;MAPQ=29;MATEID=659892:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:17328012(-)-13:17396311(+)__13_17321501_17346501D;SPAN=68299;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:28:31.7:38.3,0,31.7:0:14:-38.37:38.37\n13\t17328244\t659890:2\tA\tA[13:17287315[\t29\tPASS\tDISC_MAPQ=15;EVDNC=DSCRD;IMPRECISE;MAPQ=15;MATEID=659890:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:17287315(-)-13:17328244(+)__13_17321501_17346501D;SPAN=40929;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:10:8:2.7:29.7,2.7,0:0:10:-29.71:29.71\n13\t17361102\t659900:2\tG\t]13:16697718]G\t89\tPASS\tDISC_MAPQ=40;EVDNC=DSCRD;IMPRECISE;MAPQ=40;MATEID=659900:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16697718(+)-13:17361102(-)__13_17346001_17371001D;SPAN=663384;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:29:5:8.1:89.1,8.1,0:0:29:-89.12:89.12\n13\t17396031\t659065:2\tT\t]13:16624711]T\t28\tPASS\tDISC_MAPQ=31;EVDNC=DSCRD;IMPRECISE;MAPQ=31;MATEID=659065:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16624711(+)-13:17396031(-)__13_16611001_16636001D;SPAN=771320;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:18:14.9:28.1,0,14.9:0:10:-28.08:28.08\n13\t17396311\t659892:2\tA\tA[13:17328012[\t38\tPASS\tDISC_MAPQ=25;EVDNC=DSCRD;IMPRECISE;MAPQ=25;MATEID=659892:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:17328012(-)-13:17396311(+)__13_17321501_17346501D;SPAN=68299;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:28:31.7:38.3,0,31.7:0:14:-38.37:38.37\n13\t17431936\t660321:1\tC\tC[13:18028973[\t18\tPASS\tDISC_MAPQ=18;EVDNC=DSCRD;IMPRECISE;MAPQ=18;MATEID=660321:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:17431936(+)-13:18028973(-)__13_18007501_18032501D;SPAN=597037;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:51:18.8:18.8,0,107.9:0:10:-18.67:22.39\n13\t17553570\t660051:1\tG\tG[13:17574225[\t29\tPASS\tDISC_MAPQ=22;EVDNC=DSCRD;IMPRECISE;MAPQ=22;MATEID=660051:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:17553570(+)-13:17574225(-)__13_17566501_17591501D;SPAN=20655;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:10:9:2.7:29.7,2.7,0:0:10:-29.71:29.71\n13\t17574225\t660051:2\tC\t]13:17553570]C\t29\tPASS\tDISC_MAPQ=16;EVDNC=DSCRD;IMPRECISE;MAPQ=16;MATEID=660051:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:17553570(+)-13:17574225(-)__13_17566501_17591501D;SPAN=20655;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:10:9:2.7:29.7,2.7,0:0:10:-29.71:29.71\n13\t17711258\t660261:1\tT\tT[13:17926844[\t39\tPASS\tDISC_MAPQ=39;EVDNC=DSCRD;IMPRECISE;MAPQ=39;MATEID=660261:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:17711258(+)-13:17926844(-)__13_17909501_17934501D;SPAN=215586;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:24:19.7:39.5,0,19.7:0:14:-39.77:39.77\n13\t17926844\t660261:2\tA\t]13:17711258]A\t39\tPASS\tDISC_MAPQ=37;EVDNC=DSCRD;IMPRECISE;MAPQ=37;MATEID=660261:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:17711258(+)-13:17926844(-)__13_17909501_17934501D;SPAN=215586;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:24:19.7:39.5,0,19.7:0:14:-39.77:39.77\n13\t18028973\t660321:2\tA\t]13:17431936]A\t18\tPASS\tDISC_MAPQ=22;EVDNC=DSCRD;IMPRECISE;MAPQ=22;MATEID=660321:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:17431936(+)-13:18028973(-)__13_18007501_18032501D;SPAN=597037;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:51:18.8:18.8,0,107.9:0:10:-18.67:22.39\n13\t18652931\t822300:1\tT\tT]18:14406760]\t20\tPASS\tDISC_MAPQ=45;EVDNC=DSCRD;IMPRECISE;MAPQ=45;MATEID=822300:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:18652931(+)-18:14406760(+)__18_14406001_14431001D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:21:20.6:20.6,0,30.5:0:8:-20.51:20.65\n13\t18902672\t660713:1\tT\tT[13:18902959[\t79\tPASS\tDISC_MAPQ=49;EVDNC=ASDIS;HOMSEQ=TACAGTCAACTCTTTT;MAPQ=55;MATEID=660713:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_13_18889501_18914501_14C;SPAN=287;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:26:9:7.2:79.2,7.2,0:23:5:-79.22:79.22\n13\t18902959\t660713:2\tT\t]13:18902672]T\t79\tPASS\tDISC_MAPQ=56;EVDNC=ASDIS;HOMSEQ=TACAGTCAACTCTTTT;MAPQ=60;MATEID=660713:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_13_18889501_18914501_14C;SPAN=287;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:26:9:7.2:79.2,7.2,0:23:5:-79.22:79.22\n13\t19203230\t661023:1\tC\t]13:19704496]C\t17\tPASS\tDISC_MAPQ=42;EVDNC=DSCRD;IMPRECISE;MAPQ=42;MATEID=661023:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:19203230(-)-13:19704496(+)__13_19698001_19723001D;SPAN=501266;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:32:17.6:17.6,0,60.5:0:8:-17.41:18.87\n13\t19344209\t660883:1\tA\tA]13:24542512]\t23\tPASS\tDISC_MAPQ=54;EVDNC=DSCRD;IMPRECISE;MAPQ=54;MATEID=660883:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:19344209(+)-13:24542512(+)__13_19330501_19355501D;SPAN=5198303;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:8:2:2.1:23.1,2.1,0:0:8:-23.11:23.11\n13\t19348511\t662933:1\tA\t[13:24537297[A\t23\tPASS\tDISC_MAPQ=52;EVDNC=DSCRD;IMPRECISE;MAPQ=52;MATEID=662933:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:19348511(-)-13:24537297(-)__13_24524501_24549501D;SPAN=5188786;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:22:23.6:23.6,0,30.2:0:9:-23.53:23.59\n13\t19387612\t662903:1\tG\t[13:24442077[G\t26\tPASS\tDISC_MAPQ=46;EVDNC=DSCRD;IMPRECISE;MAPQ=46;MATEID=662903:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:19387612(-)-13:24442077(-)__13_24426501_24451501D;SPAN=5054465;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:23:26.6:26.6,0,29.9:0:10:-26.55:26.57\n13\t19549586\t661710:1\tC\tC]13:21274569]\t26\tPASS\tDISC_MAPQ=43;EVDNC=DSCRD;IMPRECISE;MAPQ=43;MATEID=661710:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:19549586(+)-13:21274569(+)__13_21266001_21291001D;SPAN=1724983;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:24:26.3:26.3,0,32.9:0:10:-26.26:26.32\n13\t19558512\t660987:1\tT\t]13:19570101]T\t17\tPASS\tDISC_MAPQ=37;EVDNC=DSCRD;IMPRECISE;MAPQ=37;MATEID=660987:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:19558512(-)-13:19570101(+)__13_19551001_19576001D;SPAN=11589;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:30:17.9:17.9,0,57.5:0:8:-17.98:19.13\n13\t19570101\t660987:2\tT\tT[13:19558512[\t17\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=660987:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:19558512(-)-13:19570101(+)__13_19551001_19576001D;SPAN=11589;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:30:17.9:17.9,0,57.5:0:8:-17.98:19.13\n13\t19704496\t661023:2\tG\tG[13:19203230[\t17\tPASS\tDISC_MAPQ=57;EVDNC=DSCRD;IMPRECISE;MAPQ=57;MATEID=661023:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:19203230(-)-13:19704496(+)__13_19698001_19723001D;SPAN=501266;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:32:17.6:17.6,0,60.5:0:8:-17.41:18.87\n13\t19716043\t661448:1\tT\t]13:20738863]T\t38\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TT;MAPQ=60;MATEID=661448:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_13_20727001_20752001_21C;SPAN=1022820;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:18:5:38,0,5:9:11:-39.01:39.01\n13\t19768374\t661073:1\tG\t]13:19818698]G\t30\tPASS\tEVDNC=ASSMB;HOMSEQ=GT;MAPQ=60;MATEID=661073:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_13_19796001_19821001_35C;SPAN=50324;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:21:20.6:30.5,0,20.6:11:0:-30.47:30.47\n13\t19818698\t661073:2\tT\tT[13:19768374[\t30\tPASS\tEVDNC=ASSMB;HOMSEQ=GT;MAPQ=60;MATEID=661073:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_13_19796001_19821001_35C;SPAN=50324;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:21:20.6:30.5,0,20.6:11:0:-30.47:30.47\n13\t20738863\t661448:2\tT\tT[13:19716043[\t38\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TT;MAPQ=60;MATEID=661448:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_13_20727001_20752001_21C;SPAN=1022820;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:18:5:38,0,5:9:11:-39.01:39.01\n13\t21274569\t661710:2\tG\tG]13:19549586]\t26\tPASS\tDISC_MAPQ=58;EVDNC=DSCRD;IMPRECISE;MAPQ=58;MATEID=661710:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:19549586(+)-13:21274569(+)__13_21266001_21291001D;SPAN=1724983;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:24:26.3:26.3,0,32.9:0:10:-26.26:26.32\n13\t21325323\t661748:2\tT\tT]6:5853533]\t69\tPASS\tDISC_MAPQ=52;EVDNC=DSCRD;IMPRECISE;MAPQ=52;MATEID=661748:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:5853533(+)-13:21325323(+)__13_21315001_21340001D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:23:6:6.3:69.3,6.3,0:0:23:-69.32:69.32\n13\t21325351\t661746:2\tG\t[6:5852479[G\t26\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=661746:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:5852479(-)-13:21325351(-)__13_21315001_21340001D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:9:8:2.4:26.4,2.4,0:0:9:-26.41:26.41\n13\t22777302\t662416:1\tA\t]13:23163697]A\t39\tPASS\tEVDNC=ASSMB;HOMSEQ=AC;MAPQ=60;MATEID=662416:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_13_23152501_23177501_7C;SPAN=386395;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:25:22.7:39.2,0,22.7:14:0:-39.39:39.39\n13\t23163697\t662416:2\tC\tC[13:22777302[\t39\tPASS\tEVDNC=ASSMB;HOMSEQ=AC;MAPQ=60;MATEID=662416:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_13_23152501_23177501_7C;SPAN=386395;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:25:22.7:39.2,0,22.7:14:0:-39.39:39.39\n13\t23871309\t662730:1\tT\t]13:24067044]T\t27\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;INSERTION=C;MAPQ=60;MATEID=662730:2;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_13_24059001_24084001_3C;SPAN=195735;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:19:17.9:27.8,0,17.9:8:7:-27.73:27.73\n13\t24067044\t662730:2\tT\tT[13:23871309[\t27\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;INSERTION=C;MAPQ=60;MATEID=662730:1;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_13_24059001_24084001_3C;SPAN=195735;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:19:17.9:27.8,0,17.9:8:7:-27.73:27.73\n13\t24442077\t662903:2\tG\t[13:19387612[G\t26\tPASS\tDISC_MAPQ=57;EVDNC=DSCRD;IMPRECISE;MAPQ=57;MATEID=662903:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:19387612(-)-13:24442077(-)__13_24426501_24451501D;SPAN=5054465;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:23:26.6:26.6,0,29.9:0:10:-26.55:26.57\n13\t24537297\t662933:2\tT\t[13:19348511[T\t23\tPASS\tDISC_MAPQ=59;EVDNC=DSCRD;IMPRECISE;MAPQ=59;MATEID=662933:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:19348511(-)-13:24537297(-)__13_24524501_24549501D;SPAN=5188786;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:22:23.6:23.6,0,30.2:0:9:-23.53:23.59\n13\t24542512\t660883:2\tA\tA]13:19344209]\t23\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=660883:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:19344209(+)-13:24542512(+)__13_19330501_19355501D;SPAN=5198303;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:8:2:2.1:23.1,2.1,0:0:8:-23.11:23.11\n13\t26476016\t663577:1\tA\tA[13:26478049[\t89\tPASS\tDISC_MAPQ=57;EVDNC=DSCRD;IMPRECISE;MAPQ=57;MATEID=663577:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:26476016(+)-13:26478049(-)__13_26460001_26485001D;SPAN=2033;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:29:3:8.1:89.1,8.1,0:0:29:-89.12:89.12\n13\t26478049\t663577:2\tT\t]13:26476016]T\t89\tPASS\tDISC_MAPQ=46;EVDNC=DSCRD;IMPRECISE;MAPQ=46;MATEID=663577:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:26476016(+)-13:26478049(-)__13_26460001_26485001D;SPAN=2033;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:29:3:8.1:89.1,8.1,0:0:29:-89.12:89.12\n13\t26833724\t663675:1\tA\t]13:26839046]A\t26\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=663675:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_13_26827501_26852501_14C;SPAN=5322;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:36:26.3:26.3,0,62.6:11:0:-26.19:27.08\n13\t26839046\t663675:2\tA\tA[13:26833724[\t26\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=663675:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_13_26827501_26852501_14C;SPAN=5322;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:36:26.3:26.3,0,62.6:11:0:-26.19:27.08\n13\t26972727\t663697:1\tC\t]13:26973623]C\t31\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=663697:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:26972727(-)-13:26973623(+)__13_26950001_26975001D;SPAN=896;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:41:31.4:31.4,0,71:0:13:-31.39:32.26\n13\t26973623\t663697:2\tA\tA[13:26972727[\t31\tPASS\tDISC_MAPQ=47;EVDNC=DSCRD;IMPRECISE;MAPQ=47;MATEID=663697:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:26972727(-)-13:26973623(+)__13_26950001_26975001D;SPAN=896;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:41:31.4:31.4,0,71:0:13:-31.39:32.26\n13\t29641700\t664459:1\tT\tT[13:29647708[\t46\tPASS\tEVDNC=ASSMB;HOMSEQ=GAGAACTACTTTTT;MAPQ=60;MATEID=664459:2;MATENM=3;NM=2;NUMPARTS=2;SCTG=c_13_29645001_29670001_11C;SPAN=6008;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:16:5:4.2:46.2,4.2,0:16:0:-46.21:46.21\n13\t29647708\t664459:2\tG\t]13:29641700]G\t46\tPASS\tEVDNC=ASSMB;HOMSEQ=GAGAACTACTTTTT;MAPQ=60;MATEID=664459:1;MATENM=2;NM=3;NUMPARTS=2;SCTG=c_13_29645001_29670001_11C;SPAN=6008;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:16:5:4.2:46.2,4.2,0:16:0:-46.21:46.21\n13\t30844083\t664798:1\tT\tT[13:30844345[\t79\tPASS\tDISC_MAPQ=40;EVDNC=ASDIS;HOMSEQ=GTGTGTGT;MAPQ=60;MATEID=664798:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_13_30821001_30846001_30C;SPAN=262;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:26:17:7.2:79.2,7.2,0:17:9:-79.22:79.22\n13\t30844345\t664798:2\tG\t]13:30844083]G\t79\tPASS\tDISC_MAPQ=47;EVDNC=ASDIS;HOMSEQ=GTGTGTGT;MAPQ=60;MATEID=664798:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_13_30821001_30846001_30C;SPAN=262;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:26:17:7.2:79.2,7.2,0:17:9:-79.22:79.22\n13\t35861692\t665952:1\tC\t]13:35861791]C\t44\tPASS\tEVDNC=ASSMB;HOMSEQ=C;MAPQ=60;MATEID=665952:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_13_35843501_35868501_5C;SPAN=99;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:16:28:25.1:44.9,0,25.1:16:0:-45.23:45.23\n13\t35861791\t665952:2\tC\tC[13:35861692[\t44\tPASS\tEVDNC=ASSMB;HOMSEQ=C;MAPQ=60;MATEID=665952:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_13_35843501_35868501_5C;SPAN=99;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:16:28:25.1:44.9,0,25.1:16:0:-45.23:45.23\n13\t35957937\t665978:1\tT\t]13:35958395]T\t12\tPASS\tDISC_MAPQ=20;EVDNC=DSCRD;IMPRECISE;MAPQ=20;MATEID=665978:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:35957937(-)-13:35958395(+)__13_35941501_35966501D;SPAN=458;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:49:12.8:12.8,0,108.5:0:8:-12.63:17.2\n13\t35958132\t665982:1\tC\t]13:35958285]C\t77\tPASS\tEVDNC=ASSMB;HOMSEQ=C;INSERTION=GTAACCATCACCACCATCACC;MAPQ=60;MATEID=665982:2;MATENM=3;NM=2;NUMPARTS=3;SCTG=c_13_35941501_35966501_17C;SECONDARY;SPAN=153;SUBN=4;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:33:111:77.9:77.9,0,200:33:0:-77.73:80.78\n13\t35958285\t665982:2\tC\tC[13:35958132[\t77\tPASS\tEVDNC=ASSMB;HOMSEQ=C;INSERTION=GTAACCATCACCACCATCACC;MAPQ=60;MATEID=665982:1;MATENM=2;NM=3;NUMPARTS=3;SCTG=c_13_35941501_35966501_17C;SECONDARY;SPAN=153;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:33:111:77.9:77.9,0,200:33:0:-77.73:80.78\n13\t35958395\t665978:2\tA\tA[13:35957937[\t12\tPASS\tDISC_MAPQ=20;EVDNC=DSCRD;IMPRECISE;MAPQ=20;MATEID=665978:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:35957937(-)-13:35958395(+)__13_35941501_35966501D;SPAN=458;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:49:12.8:12.8,0,108.5:0:8:-12.63:17.2\n13\t38483182\t666631:1\tA\tA[13:38486065[\t99\tPASS\tEVDNC=ASSMB;HOMSEQ=GGAA;MAPQ=60;MATEID=666631:2;MATENM=9;NM=1;NUMPARTS=2;SCTG=c_13_38465001_38490001_10C;SPAN=2883;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:35:18:9.6:105.6,9.6,0:35:0:-105.6:105.6\n13\t38486065\t666631:2\tG\t]13:38483182]G\t99\tPASS\tEVDNC=ASSMB;HOMSEQ=GGAA;MAPQ=60;MATEID=666631:1;MATENM=1;NM=9;NUMPARTS=2;SCTG=c_13_38465001_38490001_10C;SPAN=2883;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:35:18:9.6:105.6,9.6,0:35:0:-105.6:105.6\n13\t40077132\t667033:1\tA\t]13:40077229]A\t72\tPASS\tEVDNC=ASSMB;INSERTION=AGGAAGGAAGGAGAGAAGGAAGGAAAGAGGGAAAGAAGGAAGGAAGGTAGGGAAGCGGGGGAGGAAGGAAGG;MAPQ=60;MATEID=667033:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_13_40057501_40082501_10C;SPAN=97;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:26:48:46.1:72.5,0,46.1:26:0:-72.58:72.58\n13\t40077229\t667033:2\tA\tA[13:40077132[\t72\tPASS\tEVDNC=ASSMB;INSERTION=AGGAAGGAAGGAGAGAAGGAAGGAAAGAGGGAAAGAAGGAAGGAAGGTAGGGAAGCGGGGGAGGAAGGAAGG;MAPQ=60;MATEID=667033:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_13_40057501_40082501_10C;SPAN=97;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:26:48:46.1:72.5,0,46.1:26:0:-72.58:72.58\n13\t42373133\t667582:1\tC\t]13:42373518]C\t75\tPASS\tEVDNC=ASSMB;HOMSEQ=CT;MAPQ=60;MATEID=667582:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_13_42360501_42385501_8C;SPAN=385;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:27:50:48.8:75.2,0,48.8:27:0:-75.32:75.32\n13\t42373518\t667582:2\tT\tT[13:42373133[\t75\tPASS\tEVDNC=ASSMB;HOMSEQ=CT;MAPQ=60;MATEID=667582:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_13_42360501_42385501_8C;SPAN=385;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:27:50:48.8:75.2,0,48.8:27:0:-75.32:75.32\n13\t42457888\t667624:1\tG\tG]13:42511705]\t23\tPASS\tDISC_MAPQ=53;EVDNC=DSCRD;IMPRECISE;MAPQ=53;MATEID=667624:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:42457888(+)-13:42511705(+)__13_42507501_42532501D;SPAN=53817;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:21:23.9:23.9,0,27.2:0:9:-23.81:23.84\n13\t42511705\t667624:2\tT\tT]13:42457888]\t23\tPASS\tDISC_MAPQ=57;EVDNC=DSCRD;IMPRECISE;MAPQ=57;MATEID=667624:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:42457888(+)-13:42511705(+)__13_42507501_42532501D;SPAN=53817;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:21:23.9:23.9,0,27.2:0:9:-23.81:23.84\n13\t42965789\t667750:1\tT\tT[13:42967310[\t99\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=667750:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:42965789(+)-13:42967310(-)__13_42948501_42973501D;SPAN=1521;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:44:12:12.3:135.3,12.3,0:0:44:-135.3:135.3\n13\t42967310\t667750:2\tA\t]13:42965789]A\t99\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=667750:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:42965789(+)-13:42967310(-)__13_42948501_42973501D;SPAN=1521;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:44:12:12.3:135.3,12.3,0:0:44:-135.3:135.3\n13\t46145627\t668526:1\tA\tA[13:46145943[\t82\tPASS\tEVDNC=ASSMB;HOMSEQ=AAAAGAGGGCA;MAPQ=60;MATEID=668526:2;MATENM=0;NM=8;NUMPARTS=2;SCTG=c_13_46133501_46158501_0C;SPAN=316;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:26:27:7.5:82.5,7.5,0:26:0:-82.52:82.52\n13\t46145943\t668526:2\tA\t]13:46145627]A\t82\tPASS\tEVDNC=ASSMB;HOMSEQ=AAAAGAGGGCA;MAPQ=60;MATEID=668526:1;MATENM=8;NM=0;NUMPARTS=2;SCTG=c_13_46133501_46158501_0C;SPAN=316;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:26:27:7.5:82.5,7.5,0:26:0:-82.52:82.52\n13\t46526845\t668674:1\tT\t[13:46527506[T\t33\tPASS\tDISC_MAPQ=57;EVDNC=ASDIS;HOMSEQ=T;MAPQ=60;MATEID=668674:2;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_13_46525501_46550501_14C;SPAN=661;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:15:58:33.2:33.2,0,112.4:11:12:-33.21:35.64\n13\t46527506\t668674:2\tA\t[13:46526845[A\t33\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=T;MAPQ=60;MATEID=668674:1;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_13_46525501_46550501_14C;SPAN=661;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:15:58:33.2:33.2,0,112.4:11:12:-33.21:35.64\n13\t47537863\t669085:1\tC\tC]13:47539357]\t30\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=669085:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:47537863(+)-13:47539357(+)__13_47530001_47555001D;SPAN=1494;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:34:30.2:30.2,0,53.3:0:12:-30.06:30.47\n13\t47539357\t669085:2\tT\tT]13:47537863]\t30\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=669085:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:47537863(+)-13:47539357(+)__13_47530001_47555001D;SPAN=1494;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:34:30.2:30.2,0,53.3:0:12:-30.06:30.47\n13\t48282773\t669322:2\tA\tA]12:33864471]\t23\tPASS\tDISC_MAPQ=54;EVDNC=DSCRD;IMPRECISE;MAPQ=54;MATEID=669322:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=12:33864471(+)-13:48282773(+)__13_48265001_48290001D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:11:3.5:23.3,0,3.5:0:8:-24.05:24.05\n13\t49318685\t669546:1\tA\t]19:32019277]A\t49\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;MAPQ=60;MATEID=669546:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_13_49294001_49319001_26C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:17:7:4.5:49.5,4.5,0:14:5:-49.51:49.51\n13\t50495150\t669774:1\tA\tA[13:50500942[\t26\tPASS\tDISC_MAPQ=53;EVDNC=DSCRD;IMPRECISE;MAPQ=53;MATEID=669774:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:50495150(+)-13:50500942(-)__13_50470001_50495001D;SPAN=5792;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:9:0:2.4:26.4,2.4,0:0:9:-26.41:26.41\n13\t50500942\t669774:2\tT\t]13:50495150]T\t26\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=669774:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:50495150(+)-13:50500942(-)__13_50470001_50495001D;SPAN=5792;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:9:0:2.4:26.4,2.4,0:0:9:-26.41:26.41\n13\t56018554\t13015:2\tA\tA[1:53954324[\t0\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=13015:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_53949001_53974001_79C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/0:7:108:6.9:0,6.9,283.8:7:0:7.251:12.08\n13\t57094112\t671048:1\tT\t]13:57101297]T\t39\tPASS\tDISC_MAPQ=54;EVDNC=ASDIS;HOMSEQ=TC;MAPQ=60;MATEID=671048:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_13_57085001_57110001_4C;SPAN=7185;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:25:22.7:39.2,0,22.7:10:8:-39.39:39.39\n13\t57101297\t671048:2\tC\tC[13:57094112[\t39\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TC;MAPQ=60;MATEID=671048:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_13_57085001_57110001_4C;SPAN=7185;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:25:22.7:39.2,0,22.7:10:8:-39.39:39.39\n13\t58512431\t671309:1\tA\tA[13:58514256[\t42\tPASS\tDISC_MAPQ=54;EVDNC=DSCRD;IMPRECISE;MAPQ=54;MATEID=671309:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:58512431(+)-13:58514256(-)__13_58506001_58531001D;SPAN=1825;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:14:11:3.9:42.9,3.9,0:0:14:-42.91:42.91\n13\t58514256\t671309:2\tA\t]13:58512431]A\t42\tPASS\tDISC_MAPQ=57;EVDNC=DSCRD;IMPRECISE;MAPQ=57;MATEID=671309:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:58512431(+)-13:58514256(-)__13_58506001_58531001D;SPAN=1825;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:14:11:3.9:42.9,3.9,0:0:14:-42.91:42.91\n13\t59899878\t671671:1\tA\tA[13:59906689[\t13\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=A;MAPQ=60;MATEID=671671:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_13_59902501_59927501_0C;SPAN=6811;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:5:3:1.2:13.2,1.2,0:3:4:-13.2:13.2\n13\t59906689\t671671:2\tA\t]13:59899878]A\t13\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=A;MAPQ=60;MATEID=671671:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_13_59902501_59927501_0C;SPAN=6811;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:5:3:1.2:13.2,1.2,0:3:4:-13.2:13.2\n13\t60886851\t671890:2\tA\tA[3:103962954[\t33\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;INSERTION=T;MAPQ=60;MATEID=671890:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_13_60882501_60907501_30C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:11:9:3:33,3,0:9:4:-33.01:33.01\n13\t60888202\t383809:2\tC\t]7:25047891]C\t99\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;INSERTION=TCTC;MAPQ=60;MATEID=383809:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_7_25039001_25064001_16C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:35:24:9.6:105.6,9.6,0:27:12:-105.6:105.6\n13\t61171765\t671986:2\tT\t]8:139084311]T\t29\tPASS\tEVDNC=ASSMB;INSERTION=G;MAPQ=60;MATEID=671986:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_13_61152001_61177001_19C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:14:5.9:29,0,5.9:10:0:-29.91:29.91\n13\t66665661\t680036:1\tA\t[13:92007460[A\t29\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=T;MAPQ=60;MATEID=680036:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_13_91997501_92022501_37C;SPAN=25341799;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:23:26.6:29.9,0,26.6:7:6:-29.85:29.85\n13\t66665768\t673423:1\tT\tT]13:92058480]\t22\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=673423:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:66665768(+)-13:92058480(+)__13_66664501_66689501D;SPAN=25392712;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:16:15.5:22.1,0,15.5:0:8:-21.93:21.93\n13\t71226063\t916288:1\tG\tG]22:28674185]\t25\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=916288:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:71226063(+)-22:28674185(+)__22_28665001_28690001D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:14:9.2:25.7,0,9.2:0:9:-26.19:26.19\n13\t73390558\t491100:2\tG\tG[9:36423668[\t56\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=G;MAPQ=60;MATEID=491100:1;MATENM=2;NM=1;NUMPARTS=2;SCTG=c_9_36407001_36432001_29C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:19:7:5.1:56.1,5.1,0:14:6:-56.11:56.11\n13\t74341145\t675549:1\tT\t]13:74342865]T\t99\tPASS\tDISC_MAPQ=54;EVDNC=ASDIS;HOMSEQ=TCTA;MAPQ=60;MATEID=675549:2;MATENM=0;NM=7;NUMPARTS=2;SCTG=c_13_74333001_74358001_1C;SPAN=1720;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:40:41:11.4:125.4,11.4,0:30:18:-125.4:125.4\n13\t74342865\t675549:2\tA\tA[13:74341145[\t99\tPASS\tDISC_MAPQ=58;EVDNC=ASDIS;HOMSEQ=TCTA;MAPQ=60;MATEID=675549:1;MATENM=7;NM=0;NUMPARTS=2;SCTG=c_13_74333001_74358001_1C;SPAN=1720;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:40:41:11.4:125.4,11.4,0:30:18:-125.4:125.4\n13\t78423489\t676627:1\tC\tC[13:78424585[\t26\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AACATGGTGAAACCC;MAPQ=60;MATEID=676627:2;MATENM=0;NM=0;NUMPARTS=2;REPSEQ=CCC;SCTG=c_13_78424501_78449501_6C;SECONDARY;SPAN=1096;SUBN=7;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:9:1:2.4:26.4,2.4,0:4:5:-26.41:26.41\n13\t78424585\t676627:2\tA\t]13:78423489]A\t26\tPASS\tDISC_MAPQ=59;EVDNC=ASDIS;HOMSEQ=AACATGGTGAAACCC;MAPQ=0;MATEID=676627:1;MATENM=0;NM=0;NUMPARTS=2;REPSEQ=CCC;SCTG=c_13_78424501_78449501_6C;SECONDARY;SPAN=1096;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:9:1:2.4:26.4,2.4,0:4:5:-26.41:26.41\n13\t81782375\t677551:1\tT\tT]13:81782948]\t20\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=677551:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:81782375(+)-13:81782948(+)__13_81781001_81806001D;SPAN=573;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:34:20.3:20.3,0,63.2:0:9:-20.15:21.49\n13\t81782700\t677552:1\tT\tT]13:81782901]\t15\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=677552:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:81782700(+)-13:81782901(+)__13_81781001_81806001D;SPAN=201;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:40:15.2:15.2,0,84.5:0:8:-15.16:17.99\n13\t81782901\t677552:2\tT\tT]13:81782700]\t15\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=677552:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:81782700(+)-13:81782901(+)__13_81781001_81806001D;SPAN=201;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:40:15.2:15.2,0,84.5:0:8:-15.16:17.99\n13\t81782948\t677551:2\tA\tA]13:81782375]\t20\tPASS\tDISC_MAPQ=59;EVDNC=DSCRD;IMPRECISE;MAPQ=59;MATEID=677551:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:81782375(+)-13:81782948(+)__13_81781001_81806001D;SPAN=573;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:34:20.3:20.3,0,63.2:0:9:-20.15:21.49\n13\t81793562\t677548:2\tA\t]5:142077508]A\t46\tPASS\tDISC_MAPQ=55;EVDNC=DSCRD;IMPRECISE;MAPQ=55;MATEID=677548:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:142077508(+)-13:81793562(-)__13_81781001_81806001D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:16:16:4.2:46.2,4.2,0:0:16:-46.21:46.21\n13\t85488927\t70988:2\tT\t[2:9998890[T\t52\tPASS\tDISC_MAPQ=1;EVDNC=ASDIS;HOMSEQ=TATATAT;MAPQ=44;MATEID=70988:1;MATENM=0;NM=48;NUMPARTS=2;SCTG=c_2_9996001_10021001_50C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:18:6:4.8:52.8,4.8,0:11:8:-52.81:52.81\n13\t86269523\t678532:1\tC\t]Un_KN707957v1_decoy:11498]C\t59\tPASS\tEVDNC=ASSMB;HOMSEQ=AACCTTTACTGAACTTAAAATATG;MAPQ=60;MATEID=678532:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_13_86264501_86289501_11C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:20:5:5.4:59.4,5.4,0:20:0:-59.41:59.41\n13\t92007460\t680036:2\tT\t[13:66665661[T\t29\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=T;MAPQ=60;MATEID=680036:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_13_91997501_92022501_37C;SPAN=25341799;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:23:26.6:29.9,0,26.6:7:6:-29.85:29.85\n13\t92058480\t673423:2\tT\tT]13:66665768]\t22\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=673423:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:66665768(+)-13:92058480(+)__13_66664501_66689501D;SPAN=25392712;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:16:15.5:22.1,0,15.5:0:8:-21.93:21.93\n13\t93608748\t680421:1\tG\tG[13:93751818[\t46\tPASS\tEVDNC=ASSMB;HOMSEQ=ATG;MAPQ=60;MATEID=680421:2;MATENM=5;NM=1;NUMPARTS=2;SCTG=c_13_93737001_93762001_5C;SPAN=143070;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:16:5:4.2:46.2,4.2,0:16:0:-46.21:46.21\n13\t93751818\t680421:2\tA\t]13:93608748]A\t46\tPASS\tEVDNC=ASSMB;HOMSEQ=ATG;MAPQ=60;MATEID=680421:1;MATENM=1;NM=5;NUMPARTS=2;SCTG=c_13_93737001_93762001_5C;SPAN=143070;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:16:5:4.2:46.2,4.2,0:16:0:-46.21:46.21\n13\t93796911\t680443:1\tT\t]13:93797097]T\t32\tPASS\tEVDNC=ASSMB;HOMSEQ=T;MAPQ=60;MATEID=680443:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_13_93786001_93811001_10C;SPAN=186;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:26:32.3:32.3,0,32.3:12:0:-32.3:32.3\n13\t93797097\t680443:2\tT\tT[13:93796911[\t32\tPASS\tEVDNC=ASSMB;HOMSEQ=T;MAPQ=60;MATEID=680443:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_13_93786001_93811001_10C;SPAN=186;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:26:32.3:32.3,0,32.3:12:0:-32.3:32.3\n13\t96800817\t681120:1\tT\t]13:96829051]T\t99\tPASS\tDISC_MAPQ=59;EVDNC=ASDIS;HOMSEQ=TT;MAPQ=60;MATEID=681120:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_13_96824001_96849001_1C;SPAN=28234;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:36:17:9.9:108.9,9.9,0:25:26:-108.9:108.9\n13\t96829051\t681120:2\tT\tT[13:96800817[\t99\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TT;MAPQ=60;MATEID=681120:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_13_96824001_96849001_1C;SPAN=28234;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:36:17:9.9:108.9,9.9,0:25:26:-108.9:108.9\n13\t101241852\t682110:1\tC\tC[13:101244073[\t33\tPASS\tDISC_MAPQ=57;EVDNC=DSCRD;IMPRECISE;MAPQ=57;MATEID=682110:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:101241852(+)-13:101244073(-)__13_101234001_101259001D;SPAN=2221;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:11:3:3:33,3,0:0:11:-33.01:33.01\n13\t101244073\t682110:2\tA\t]13:101241852]A\t33\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=682110:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:101241852(+)-13:101244073(-)__13_101234001_101259001D;SPAN=2221;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:11:3:3:33,3,0:0:11:-33.01:33.01\n13\t107584405\t916294:1\tC\tC]22:28669946]\t32\tPASS\tEVDNC=ASSMB;HOMSEQ=TTC;MAPQ=60;MATEID=916294:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_22_28665001_28690001_142C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:16:72:32.6:32.6,0,148.1:16:0:-32.58:36.8\n13\t110928542\t684409:1\tA\t]13:110928733]A\t29\tPASS\tEVDNC=ASSMB;HOMSEQ=ATTT;MAPQ=60;MATEID=684409:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_13_110911501_110936501_0C;SPAN=191;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:38:29:29,0,65.3:12:0:-28.93:29.75\n13\t110928733\t684409:2\tT\tT[13:110928542[\t29\tPASS\tEVDNC=ASSMB;HOMSEQ=ATTT;MAPQ=60;MATEID=684409:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_13_110911501_110936501_0C;SPAN=191;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:38:29:29,0,65.3:12:0:-28.93:29.75\n13\t110938204\t684417:1\tG\t]13:110938379]G\t20\tPASS\tEVDNC=ASSMB;INSERTION=GCATGTCCTGGAGAAAG;MAPQ=60;MATEID=684417:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_13_110936001_110961001_10C;SPAN=175;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:32:20.9:20.9,0,57.2:9:0:-20.71:21.77\n13\t110938379\t684417:2\tC\tC[13:110938204[\t20\tPASS\tEVDNC=ASSMB;INSERTION=GCATGTCCTGGAGAAAG;MAPQ=60;MATEID=684417:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_13_110936001_110961001_10C;SPAN=175;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:32:20.9:20.9,0,57.2:9:0:-20.71:21.77\n13\t111790677\t684590:1\tT\t]13:111790963]T\t48\tPASS\tEVDNC=ASSMB;HOMSEQ=TGTCCATGTCTGTCTGT;MAPQ=60;MATEID=684590:2;MATENM=0;NM=3;NUMPARTS=2;SCTG=c_13_111769001_111794001_19C;SPAN=286;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:17:28:21.8:48.2,0,21.8:17:0:-48.77:48.77\n13\t111790963\t684590:2\tT\tT[13:111790677[\t48\tPASS\tEVDNC=ASSMB;HOMSEQ=TGTCCATGTCTGTCTGT;MAPQ=60;MATEID=684590:1;MATENM=3;NM=0;NUMPARTS=2;SCTG=c_13_111769001_111794001_19C;SPAN=286;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:17:28:21.8:48.2,0,21.8:17:0:-48.77:48.77\n13\t111793420\t684595:1\tT\tT]Un_JTFH01000010v1_decoy:9358]\t42\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=684595:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_13_111769001_111794001_29C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:14:4:3.9:42.9,3.9,0:14:0:-42.91:42.91\n13\t113136637\t684857:1\tT\tT[13:113136950[\t46\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AATTCTTGTACTTTT;MAPQ=60;MATEID=684857:2;MATENM=4;NM=0;NUMPARTS=2;SCTG=c_13_113116501_113141501_0C;SPAN=313;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:15:11:4.2:46.2,4.2,0:11:6:-46.21:46.21\n13\t113136950\t684857:2\tA\t]13:113136637]A\t46\tPASS\tDISC_MAPQ=49;EVDNC=ASDIS;HOMSEQ=AATTCTTGTACTTTT;MAPQ=60;MATEID=684857:1;MATENM=0;NM=4;NUMPARTS=2;SCTG=c_13_113116501_113141501_0C;SPAN=313;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:15:11:4.2:46.2,4.2,0:11:6:-46.21:46.21\n13\t113802656\t685090:1\tA\tA[13:113803662[\t59\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=685090:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:113802656(+)-13:113803662(-)__13_113802501_113827501D;SPAN=1006;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:20:4:5.4:59.4,5.4,0:0:20:-59.41:59.41\n13\t113803662\t685090:2\tC\t]13:113802656]C\t59\tPASS\tDISC_MAPQ=49;EVDNC=DSCRD;IMPRECISE;MAPQ=49;MATEID=685090:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:113802656(+)-13:113803662(-)__13_113802501_113827501D;SPAN=1006;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:20:4:5.4:59.4,5.4,0:0:20:-59.41:59.41\n14\t16127970\t685851:1\tA\tA[14:16129237[\t11\tPASS\tDISC_MAPQ=56;EVDNC=DSCRD;IMPRECISE;MAPQ=56;MATEID=685851:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=14:16127970(+)-14:16129237(-)__14_16121001_16146001D;SPAN=1267;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:67:11:11,0,156.2:0:9:-10.88:18.53\n14\t16129237\t685851:2\tA\t]14:16127970]A\t11\tPASS\tDISC_MAPQ=17;EVDNC=DSCRD;IMPRECISE;MAPQ=17;MATEID=685851:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=14:16127970(+)-14:16129237(-)__14_16121001_16146001D;SPAN=1267;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:67:11:11,0,156.2:0:9:-10.88:18.53\n14\t16136222\t685870:1\tG\tG[14:16137856[\t7\tPASS\tDISC_MAPQ=46;EVDNC=DSCRD;IMPRECISE;MAPQ=46;MATEID=685870:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=14:16136222(+)-14:16137856(-)__14_16121001_16146001D;SPAN=1634;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:103:7.4:7.4,0,251.6:0:11:-7.359:21.48\n14\t16137856\t685870:2\tA\t]14:16136222]A\t7\tPASS\tDISC_MAPQ=57;EVDNC=DSCRD;IMPRECISE;MAPQ=57;MATEID=685870:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=14:16136222(+)-14:16137856(-)__14_16121001_16146001D;SPAN=1634;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:103:7.4:7.4,0,251.6:0:11:-7.359:21.48\n14\t18223617\t112281:2\tG\t[2:132243814[G\t95\tPASS\tDISC_MAPQ=58;EVDNC=DSCRD;IMPRECISE;MAPQ=58;MATEID=112281:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=2:132243814(-)-14:18223617(-)__2_132226501_132251501D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:32:29:8.7:95.7,8.7,0:0:32:-95.72:95.72\n14\t20083865\t686796:1\tA\t]14:20200104]A\t31\tPASS\tEVDNC=ASSMB;HOMSEQ=AAATA;MAPQ=60;MATEID=686796:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_20188001_20213001_24C;SPAN=116239;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:18:11.6:31.4,0,11.6:11:0:-31.6:31.6\n14\t20200104\t686796:2\tA\tA[14:20083865[\t31\tPASS\tEVDNC=ASSMB;HOMSEQ=AAATA;MAPQ=60;MATEID=686796:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_20188001_20213001_24C;SPAN=116239;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:18:11.6:31.4,0,11.6:11:0:-31.6:31.6\n14\t20254838\t686826:2\tA\tA]5:53611921]\t36\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;INSERTION=CAACTT;MAPQ=60;MATEID=686826:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_20237001_20262001_59C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:11:12:3.3:36.3,3.3,0:7:4:-35.86:35.86\n14\t20273533\t941661:1\tC\t]X:111769097]C\t42\tPASS\tDISC_MAPQ=54;EVDNC=ASDIS;INSERTION=A;MAPQ=60;MATEID=941661:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_23_111769001_111794001_6C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:13:14:3.9:42.9,3.9,0:9:8:-42.71:42.71\n14\t21484465\t687336:1\tC\tC[14:21486504[\t52\tPASS\tEVDNC=ASSMB;INSERTION=T;MAPQ=60;MATEID=687336:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_21486501_21511501_19C;SPAN=2039;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:18:5:4.8:52.8,4.8,0:18:0:-52.81:52.81\n14\t21486504\t687336:2\tT\t]14:21484465]T\t52\tPASS\tEVDNC=ASSMB;INSERTION=T;MAPQ=60;MATEID=687336:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_21486501_21511501_19C;SPAN=2039;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:18:5:4.8:52.8,4.8,0:18:0:-52.81:52.81\n14\t23900202\t688158:1\tA\t]14:23900406]A\t53\tPASS\tEVDNC=ASSMB;INSERTION=A;MAPQ=60;MATEID=688158:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_23887501_23912501_23C;SPAN=204;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:20:46:53.3:53.3,0,59.9:20:0:-53.09:53.14\n14\t23900406\t688158:2\tG\tG[14:23900202[\t53\tPASS\tEVDNC=ASSMB;INSERTION=A;MAPQ=60;MATEID=688158:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_23887501_23912501_23C;SPAN=204;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:20:46:53.3:53.3,0,59.9:20:0:-53.09:53.14\n14\t24793131\t688422:1\tG\tG[14:24793919[\t39\tPASS\tEVDNC=ASSMB;HOMSEQ=CAG;MAPQ=60;MATEID=688422:2;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_14_24769501_24794501_12C;SPAN=788;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:13:16:0.9:39.6,0.9,0:13:0:-40.41:40.41\n14\t24793919\t688422:2\tC\t]14:24793131]C\t39\tPASS\tEVDNC=ASSMB;HOMSEQ=CAG;MAPQ=60;MATEID=688422:1;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_14_24769501_24794501_12C;SPAN=788;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:13:16:0.9:39.6,0.9,0:13:0:-40.41:40.41\n14\t25677909\t688735:1\tT\tT[14:25678252[\t85\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=GAATTTAAGGTTTAT;MAPQ=60;MATEID=688735:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_25676001_25701001_30C;SPAN=343;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:28:22:7.8:85.8,7.8,0:22:8:-85.82:85.82\n14\t25678252\t688735:2\tG\t]14:25677909]G\t85\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=GAATTTAAGGTTTAT;MAPQ=60;MATEID=688735:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_25676001_25701001_30C;SPAN=343;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:28:22:7.8:85.8,7.8,0:22:8:-85.82:85.82\n14\t26232412\t688910:1\tA\tA[14:26232713[\t17\tPASS\tEVDNC=ASSMB;HOMSEQ=GAAAGAAAGAA;MAPQ=60;MATEID=688910:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_26215001_26240001_53C;SPAN=301;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:32:17.6:17.6,0,60.5:8:0:-17.41:18.87\n14\t26232713\t688910:2\tG\t]14:26232412]G\t17\tPASS\tEVDNC=ASSMB;HOMSEQ=GAAAGAAAGAA;MAPQ=60;MATEID=688910:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_26215001_26240001_53C;SPAN=301;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:32:17.6:17.6,0,60.5:8:0:-17.41:18.87\n14\t29258843\t689881:1\tT\tT[14:29259597[\t95\tPASS\tEVDNC=ASSMB;HOMSEQ=GAGAATTCTTT;MAPQ=60;MATEID=689881:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_14_29253001_29278001_57C;SPAN=754;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:32:19:8.7:95.7,8.7,0:32:0:-95.72:95.72\n14\t29259597\t689881:2\tG\t]14:29258843]G\t95\tPASS\tEVDNC=ASSMB;HOMSEQ=GAGAATTCTTT;MAPQ=60;MATEID=689881:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_14_29253001_29278001_57C;SPAN=754;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:32:19:8.7:95.7,8.7,0:32:0:-95.72:95.72\n14\t29550324\t689981:1\tT\t]14:29597866]T\t38\tPASS\tEVDNC=ASSMB;INSERTION=AATACCTTTACCT;MAPQ=60;MATEID=689981:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_29596001_29621001_6C;SPAN=47542;SUBN=4;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:17:2:38.3,0,2:13:0:-39.65:39.65\n14\t29597866\t689981:2\tA\tA[14:29550324[\t38\tPASS\tEVDNC=ASSMB;INSERTION=AATACCTTTACCT;MAPQ=60;MATEID=689981:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_29596001_29621001_6C;SPAN=47542;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:17:2:38.3,0,2:13:0:-39.65:39.65\n14\t30183739\t690144:1\tT\t]14:30390239]T\t36\tPASS\tEVDNC=ASSMB;HOMSEQ=TTC;MAPQ=60;MATEID=690144:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_30380001_30405001_60C;SPAN=206500;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:22:17:36.8,0,17:13:0:-37.05:37.05\n14\t30390239\t690144:2\tC\tC[14:30183739[\t36\tPASS\tEVDNC=ASSMB;HOMSEQ=TTC;MAPQ=60;MATEID=690144:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_30380001_30405001_60C;SPAN=206500;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:22:17:36.8,0,17:13:0:-37.05:37.05\n14\t30517301\t690169:1\tG\tG[14:30517556[\t17\tPASS\tEVDNC=ASSMB;INSERTION=GTGCCAA;MAPQ=60;MATEID=690169:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_30502501_30527501_21C;SPAN=255;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:33:17.3:17.3,0,63.5:8:0:-17.13:18.75\n14\t30517556\t690169:2\tA\t]14:30517301]A\t17\tPASS\tEVDNC=ASSMB;INSERTION=GTGCCAA;MAPQ=60;MATEID=690169:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_30502501_30527501_21C;SPAN=255;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:33:17.3:17.3,0,63.5:8:0:-17.13:18.75\n14\t31473803\t690512:1\tT\tT[14:31474115[\t24\tPASS\tEVDNC=ASSMB;HOMSEQ=GCAAATCTTTTCTT;MAPQ=60;MATEID=690512:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_31458001_31483001_77C;SPAN=312;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:30:24.5:24.5,0,50.9:10:0:-24.58:25.08\n14\t31474115\t690512:2\tG\t]14:31473803]G\t24\tPASS\tEVDNC=ASSMB;HOMSEQ=GCAAATCTTTTCTT;MAPQ=60;MATEID=690512:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_31458001_31483001_77C;SPAN=312;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:30:24.5:24.5,0,50.9:10:0:-24.58:25.08\n14\t32157501\t690790:1\tA\t[14:32193596[A\t19\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;INSERTION=TGAC;MAPQ=60;MATEID=690790:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_32193001_32218001_25C;SPAN=36095;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:7:13:12.8:19.4,0,12.8:5:4:-19.51:19.51\n14\t32193596\t690790:2\tA\t[14:32157501[A\t19\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;INSERTION=TGAC;MAPQ=60;MATEID=690790:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_32193001_32218001_25C;SPAN=36095;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:7:13:12.8:19.4,0,12.8:5:4:-19.51:19.51\n14\t33266964\t691140:1\tA\t]14:33377878]A\t36\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=A;MAPQ=60;MATEID=691140:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_33369001_33394001_65C;SPAN=110914;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:11:12:3.3:36.3,3.3,0:9:3:-35.86:35.86\n14\t33377878\t691140:2\tA\tA[14:33266964[\t36\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=A;MAPQ=60;MATEID=691140:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_33369001_33394001_65C;SPAN=110914;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:11:12:3.3:36.3,3.3,0:9:3:-35.86:35.86\n14\t34836097\t691617:1\tA\tA[14:34836416[\t59\tPASS\tEVDNC=ASSMB;HOMSEQ=AAAACTTTCTATA;MAPQ=60;MATEID=691617:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_34814501_34839501_90C;SPAN=319;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:20:24:0:59.4,0,0:20:0:-62.69:62.69\n14\t34836416\t691617:2\tA\t]14:34836097]A\t59\tPASS\tEVDNC=ASSMB;HOMSEQ=AAAACTTTCTATA;MAPQ=60;MATEID=691617:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_34814501_34839501_90C;SPAN=319;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:20:24:0:59.4,0,0:20:0:-62.69:62.69\n14\t34932207\t691675:1\tA\tA[14:34932518[\t30\tPASS\tEVDNC=ASSMB;HOMSEQ=AAGAAATTTCA;MAPQ=60;MATEID=691675:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_14_34912501_34937501_54C;SPAN=311;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:21:20.6:30.5,0,20.6:11:0:-30.47:30.47\n14\t34932518\t691675:2\tA\t]14:34932207]A\t30\tPASS\tEVDNC=ASSMB;HOMSEQ=AAGAAATTTCA;MAPQ=60;MATEID=691675:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_14_34912501_34937501_54C;SPAN=311;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:21:20.6:30.5,0,20.6:11:0:-30.47:30.47\n14\t35038580\t691752:1\tC\tC[14:35040301[\t27\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=691752:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=14:35038580(+)-14:35040301(-)__14_35035001_35060001D;SPAN=1721;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:31:27.8:27.8,0,47.6:0:11:-27.6:27.96\n14\t35040301\t691752:2\tA\t]14:35038580]A\t27\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=691752:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=14:35038580(+)-14:35040301(-)__14_35035001_35060001D;SPAN=1721;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:31:27.8:27.8,0,47.6:0:11:-27.6:27.96\n14\t37047457\t692387:2\tG\t]4:135304935]G\t21\tPASS\tEVDNC=ASSMB;INSERTION=TG;MAPQ=60;MATEID=692387:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_37044001_37069001_19C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:17:18.5:21.8,0,18.5:8:0:-21.63:21.63\n14\t37300358\t692473:1\tG\tG]16:61045452]\t22\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=692473:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=14:37300358(+)-16:61045452(+)__14_37289001_37314001D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:13:9.5:22.7,0,9.5:0:8:-23.02:23.02\n14\t37562864\t692591:1\tT\t]14:37597657]T\t99\tPASS\tEVDNC=ASSMB;HOMSEQ=T;MAPQ=60;MATEID=692591:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_37583001_37608001_85C;SPAN=34793;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:40:33:11.1:122.1,11.1,0:40:0:-122.1:122.1\n14\t37592330\t692637:1\tG\t]14:37715510]G\t32\tPASS\tDISC_MAPQ=255;EVDNC=ASDIS;HOMSEQ=GGCT;MAPQ=60;MATEID=692637:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_37705501_37730501_45C;SPAN=123180;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:25:29.3:32.6,0,29.3:8:9:-32.59:32.59\n14\t37597657\t692591:2\tT\tT[14:37562864[\t99\tPASS\tEVDNC=ASSMB;HOMSEQ=T;MAPQ=60;MATEID=692591:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_37583001_37608001_85C;SPAN=34793;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:40:33:11.1:122.1,11.1,0:40:0:-122.1:122.1\n14\t37715510\t692637:2\tT\tT[14:37592330[\t32\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=GGCT;MAPQ=60;MATEID=692637:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_37705501_37730501_45C;SPAN=123180;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:25:29.3:32.6,0,29.3:8:9:-32.59:32.59\n14\t37776046\t692663:1\tT\tT[14:37776247[\t99\tPASS\tEVDNC=ASSMB;HOMSEQ=TGGGTCTTGATTCTTT;MAPQ=60;MATEID=692663:2;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_14_37754501_37779501_67C;SPAN=201;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:35:20:9.6:105.6,9.6,0:35:0:-105.6:105.6\n14\t37776247\t692663:2\tT\t]14:37776046]T\t99\tPASS\tEVDNC=ASSMB;HOMSEQ=TGGGTCTTGATTCTTT;MAPQ=60;MATEID=692663:1;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_14_37754501_37779501_67C;SPAN=201;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:35:20:9.6:105.6,9.6,0:35:0:-105.6:105.6\n14\t37777674\t692738:1\tC\t]14:37911211]C\t24\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=C;MAPQ=60;MATEID=692738:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_37901501_37926501_37C;SPAN=133537;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:29:24.8:24.8,0,47.9:9:6:-24.86:25.27\n14\t37911211\t692738:2\tC\tC[14:37777674[\t24\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=C;MAPQ=60;MATEID=692738:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_37901501_37926501_37C;SPAN=133537;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:29:24.8:24.8,0,47.9:9:6:-24.86:25.27\n14\t38174306\t692839:1\tC\tC[14:38174608[\t52\tPASS\tEVDNC=ASSMB;HOMSEQ=CACCCTGTGCCTTTTC;MAPQ=60;MATEID=692839:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_14_38171001_38196001_77C;SPAN=302;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:18:25:9.5:52.4,0,9.5:18:0:-53.96:53.96\n14\t38174608\t692839:2\tC\t]14:38174306]C\t52\tPASS\tEVDNC=ASSMB;HOMSEQ=CACCCTGTGCCTTTTC;MAPQ=60;MATEID=692839:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_14_38171001_38196001_77C;SPAN=302;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:18:25:9.5:52.4,0,9.5:18:0:-53.96:53.96\n14\t39033514\t693049:1\tT\t]14:39033642]T\t85\tPASS\tEVDNC=ASSMB;HOMSEQ=TAA;MAPQ=60;MATEID=693049:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_39028501_39053501_78C;SPAN=128;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:31:61:65.6:85.4,0,65.6:31:0:-85.28:85.28\n14\t39033642\t693049:2\tA\tA[14:39033514[\t85\tPASS\tEVDNC=ASSMB;HOMSEQ=TAA;MAPQ=60;MATEID=693049:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_39028501_39053501_78C;SPAN=128;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:31:61:65.6:85.4,0,65.6:31:0:-85.28:85.28\n14\t39411765\t693274:1\tC\t]14:39412419]C\t16\tPASS\tEVDNC=ASSMB;HOMSEQ=CCC;MAPQ=60;MATEID=693274:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_39396001_39421001_45C;SPAN=654;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:47:16.7:16.7,0,99.2:9:0:-16.5:20.04\n14\t39412419\t693274:2\tC\tC[14:39411765[\t16\tPASS\tEVDNC=ASSMB;HOMSEQ=CCC;MAPQ=60;MATEID=693274:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_39396001_39421001_45C;SPAN=654;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:47:16.7:16.7,0,99.2:9:0:-16.5:20.04\n14\t39629205\t693352:1\tT\tT[14:39631010[\t56\tPASS\tEVDNC=ASSMB;HOMSEQ=AGAGTCCTGAAATAACTT;MAPQ=60;MATEID=693352:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_39616501_39641501_23C;SPAN=1805;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:20:33:23.9:56.9,0,23.9:20:0:-57.35:57.35\n14\t39631010\t693352:2\tA\t]14:39629205]A\t56\tPASS\tEVDNC=ASSMB;HOMSEQ=AGAGTCCTGAAATAACTT;MAPQ=60;MATEID=693352:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_39616501_39641501_23C;SPAN=1805;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:20:33:23.9:56.9,0,23.9:20:0:-57.35:57.35\n14\t40140611\t693536:1\tA\tA[14:40148469[\t99\tPASS\tEVDNC=ASSMB;INSERTION=CAGGCTCCTTTGTAAATAA;MAPQ=60;MATEID=693536:2;MATENM=5;NM=0;NUMPARTS=2;SCTG=c_14_40131001_40156001_3C;SPAN=7858;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:42:19:11.7:128.7,11.7,0:42:0:-128.7:128.7\n14\t40148469\t693536:2\tT\t]14:40140611]T\t99\tPASS\tEVDNC=ASSMB;INSERTION=CAGGCTCCTTTGTAAATAA;MAPQ=60;MATEID=693536:1;MATENM=0;NM=5;NUMPARTS=2;SCTG=c_14_40131001_40156001_3C;SPAN=7858;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:42:19:11.7:128.7,11.7,0:42:0:-128.7:128.7\n14\t40498185\t693818:1\tA\tA]14:40771514]\t18\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;INSERTION=CT;MAPQ=60;MATEID=693818:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_40768001_40793001_9C;SPAN=273329;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:7:15:18.8:18.8,0,18.8:6:2:-18.89:18.89\n14\t40498855\t693697:1\tT\tT[14:40559038[\t38\tPASS\tEVDNC=ASSMB;HOMSEQ=AGTT;MAPQ=60;MATEID=693697:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_14_40547501_40572501_2C;SPAN=60183;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:18:5:38,0,5:13:0:-39.01:39.01\n14\t40559038\t693697:2\tA\t]14:40498855]A\t38\tPASS\tEVDNC=ASSMB;HOMSEQ=AGTT;MAPQ=60;MATEID=693697:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_14_40547501_40572501_2C;SPAN=60183;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:18:5:38,0,5:13:0:-39.01:39.01\n14\t40771514\t693818:2\tC\tC]14:40498185]\t18\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;INSERTION=CT;MAPQ=60;MATEID=693818:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_40768001_40793001_9C;SPAN=273329;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:7:15:18.8:18.8,0,18.8:6:2:-18.89:18.89\n14\t40906937\t693878:1\tT\tT]14:40907574]\t56\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=693878:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=14:40906937(+)-14:40907574(+)__14_40890501_40915501D;SPAN=637;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:20:34:26.9:56.6,0,26.9:0:20:-56.93:56.93\n14\t40907574\t693878:2\tT\tT]14:40906937]\t56\tPASS\tDISC_MAPQ=57;EVDNC=DSCRD;IMPRECISE;MAPQ=57;MATEID=693878:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=14:40906937(+)-14:40907574(+)__14_40890501_40915501D;SPAN=637;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:20:34:26.9:56.6,0,26.9:0:20:-56.93:56.93\n14\t41200462\t703848:1\tG\t]14:69277912]G\t18\tPASS\tDISC_MAPQ=255;EVDNC=ASDIS;HOMSEQ=GCC;MAPQ=60;MATEID=703848:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_69261501_69286501_67C;SPAN=28077450;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:7:16:18.8:18.8,0,18.8:1:7:-18.61:18.62\n14\t42279188\t694411:1\tT\tT[14:42279553[\t1\tPASS\tEVDNC=ASSMB;HOMSEQ=AAGTGCTGGGATTACAGGCGTGAGCCACCGT;MAPQ=60;MATEID=694411:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_42262501_42287501_0C;SPAN=365;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:4:41:1.7:1.7,0,100.7:4:0:-1.679:7.644\n14\t42279553\t694411:2\tA\t]14:42279188]A\t1\tPASS\tEVDNC=ASSMB;HOMSEQ=AAGTGCTGGGATTACAGGCGTGAGCCACCGT;MAPQ=60;MATEID=694411:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_42262501_42287501_0C;SPAN=365;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:4:41:1.7:1.7,0,100.7:4:0:-1.679:7.644\n14\t42291888\t694422:1\tT\tT[14:42292221[\t78\tPASS\tEVDNC=ASSMB;HOMSEQ=AAAATAAAAAATTTT;MAPQ=60;MATEID=694422:2;MATENM=0;NM=5;NUMPARTS=2;SCTG=c_14_42287001_42312001_18C;SPAN=333;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:27:37:12.8:78.8,0,12.8:27:0:-81.25:81.25\n14\t42292221\t694422:2\tA\t]14:42291888]A\t78\tPASS\tEVDNC=ASSMB;HOMSEQ=AAAATAAAAAATTTT;MAPQ=60;MATEID=694422:1;MATENM=5;NM=0;NUMPARTS=2;SCTG=c_14_42287001_42312001_18C;SPAN=333;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:27:37:12.8:78.8,0,12.8:27:0:-81.25:81.25\n14\t42561542\t694524:2\tT\t[5:1364018[T\t39\tPASS\tDISC_MAPQ=54;EVDNC=ASDIS;HOMSEQ=TTG;MAPQ=60;MATEID=694524:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_42556501_42581501_72C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:25:22.7:39.2,0,22.7:5:11:-39.39:39.39\n14\t44082765\t707096:1\tT\t[14:77757284[T\t46\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=A;MAPQ=60;MATEID=707096:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_77738501_77763501_83C;SPAN=33674519;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:16:22:7.1:46.7,0,7.1:15:3:-48.1:48.1\n14\t44119784\t695089:1\tA\tA[14:44122512[\t36\tPASS\tDISC_MAPQ=20;EVDNC=DSCRD;IMPRECISE;MAPQ=20;MATEID=695089:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=14:44119784(+)-14:44122512(-)__14_44100001_44125001D;SPAN=2728;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:23:20:36.5,0,20:0:13:-36.66:36.66\n14\t44122512\t695089:2\tA\t]14:44119784]A\t36\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=695089:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=14:44119784(+)-14:44122512(-)__14_44100001_44125001D;SPAN=2728;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:23:20:36.5,0,20:0:13:-36.66:36.66\n14\t44417492\t695199:1\tC\tC[14:44417494[\t99\tPASS\tDISC_MAPQ=255;EVDNC=TSI_G;HOMSEQ=TATCTCTAGA;INSERTION=TTCCTGGTCAGTAAGACCTCAAAAGGTTAAATACTAACAACTTACACACCTTAAATGTTTATCAAAAATTACTGGGCAATATTAATTGGCTTCACTCCACCTTGGGCATAACTACTGATAAGTTACAAAACCTGTTTTCTACCCTAAAGGGCAATATAGCCCTACACTGTCCCAGGTATTTAACTCCTGCAGCAAAAAGGGAAATTGAGGAAGTAGAGCAAGCTCTTTCTCGGAGGCAACTAGATCGCATAGACCCATGATATTCAGTTCAATAGTTTGTTTTTCTTAGTAAACATTCCCTAACAGGATTAATAAGATAGATGGCCCCAGGGCTATGCTTCCTAGAATGGGTTTTTTGCTCACTTACCAGGACTAAAACACTATCTCCCTACATCCAGCTAGTTAGTAAAGTTATCTATACAGGCCACAGATGATGCCATCAGTTGCTAGGTTATGACCCTGAGGTCATAAGAATTCCTTGAGTAAAAAGTAATTCGAAGCAGTATTGCCCT;MAPQ=60;MATEID=695199:2;MATENM=0;NM=1;NUMPARTS=5;SCTG=c_14_44394001_44419001_79C;SECONDARY;SPAN=2;SUBN=2;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:41:40:11.4:125.4,11.4,0:41:0:-125.4:125.4\n14\t44417494\t695199:2\tT\t]14:44417492]T\t99\tPASS\tDISC_MAPQ=255;EVDNC=TSI_G;HOMSEQ=TATCTCTAGA;INSERTION=TTCCTGGTCAGTAAGACCTCAAAAGGTTAAATACTAACAACTTACACACCTTAAATGTTTATCAAAAATTACTGGGCAATATTAATTGGCTTCACTCCACCTTGGGCATAACTACTGATAAGTTACAAAACCTGTTTTCTACCCTAAAGGGCAATATAGCCCTACACTGTCCCAGGTATTTAACTCCTGCAGCAAAAAGGGAAATTGAGGAAGTAGAGCAAGCTCTTTCTCGGAGGCAACTAGATCGCATAGACCCATGATATTCAGTTCAATAGTTTGTTTTTCTTAGTAAACATTCCCTAACAGGATTAATAAGATAGATGGCCCCAGGGCTATGCTTCCTAGAATGGGTTTTTTGCTCACTTACCAGGACTAAAACACTATCTCCCTACATCCAGCTAGTTAGTAAAGTTATCTATACAGGCCACAGATGATGCCATCAGTTGCTAGGTTATGACCCTGAGGTCATAAGAATTCCTTGAGTAAAAAGTAATTCGAAGCAGTATTGCCCT;MAPQ=60;MATEID=695199:1;MATENM=1;NM=0;NUMPARTS=5;SCTG=c_14_44394001_44419001_79C;SECONDARY;SPAN=2;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:41:40:11.4:125.4,11.4,0:41:0:-125.4:125.4\n14\t45854840\t861822:1\tA\tA]20:6368548]\t27\tPASS\tDISC_MAPQ=55;EVDNC=DSCRD;IMPRECISE;MAPQ=55;MATEID=861822:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=14:45854840(+)-20:6368548(+)__20_6345501_6370501D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:19:17.9:27.8,0,17.9:0:10:-27.73:27.73\n14\t46108735\t695643:1\tG\tG[14:46109041[\t56\tPASS\tEVDNC=ASSMB;HOMSEQ=AAAAGCCTCCAATTG;MAPQ=60;MATEID=695643:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_46109001_46134001_13C;SPAN=306;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:19:12:5.1:56.1,5.1,0:19:0:-56.11:56.11\n14\t46109041\t695643:2\tA\t]14:46108735]A\t56\tPASS\tEVDNC=ASSMB;HOMSEQ=AAAAGCCTCCAATTG;MAPQ=60;MATEID=695643:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_46109001_46134001_13C;SPAN=306;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:19:12:5.1:56.1,5.1,0:19:0:-56.11:56.11\n14\t46648665\t701678:1\tG\t[14:62759566[G\t99\tPASS\tDISC_MAPQ=31;EVDNC=ASDIS;MAPQ=41;MATEID=701678:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_62744501_62769501_35C;SPAN=16110901;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:38:17:10.5:115.5,10.5,0:31:15:-115.5:115.5\n14\t46956857\t695916:1\tT\t]14:46957155]T\t1\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=695916:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_46942001_46967001_19C;SPAN=298;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:4:43:1.1:1.1,0,106.7:4:0:-1.117:7.557\n14\t46957155\t695916:2\tT\tT[14:46956857[\t1\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=695916:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_46942001_46967001_19C;SPAN=298;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:4:43:1.1:1.1,0,106.7:4:0:-1.117:7.557\n14\t47514459\t820233:1\tG\tG]18:6432646]\t25\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=820233:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=14:47514459(+)-18:6432646(+)__18_6419001_6444001D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:15:12.2:25.4,0,12.2:0:9:-25.74:25.74\n14\t47597634\t696119:1\tA\tA[14:47598663[\t29\tPASS\tEVDNC=ASSMB;HOMSEQ=TA;MAPQ=60;MATEID=696119:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_47579001_47604001_3C;SPAN=1029;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:25:29.3:29.3,0,32.6:11:0:-29.28:29.3\n14\t47598663\t696119:2\tT\t]14:47597634]T\t29\tPASS\tEVDNC=ASSMB;HOMSEQ=TA;MAPQ=60;MATEID=696119:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_47579001_47604001_3C;SPAN=1029;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:25:29.3:29.3,0,32.6:11:0:-29.28:29.3\n14\t47694624\t820234:1\tT\t[18:6432597[T\t46\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=T;MAPQ=60;MATEID=820234:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_18_6419001_6444001_8C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:16:13:4.2:46.2,4.2,0:11:5:-46.21:46.21\n14\t47771434\t696185:1\tC\tC[X:150398269[\t22\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=696185:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=14:47771434(+)-23:150398269(-)__14_47750501_47775501D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:16:15.5:22.1,0,15.5:0:8:-21.93:21.93\n14\t47771706\t948160:1\tA\t]X:150398432]A\t23\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=948160:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=14:47771706(-)-23:150398432(+)__23_150381001_150406001D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:8:3:2.1:23.1,2.1,0:0:8:-23.11:23.11\n14\t48882209\t696542:1\tC\tC[14:49023146[\t99\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=GGTGCAGTGGCTCATGCCTGTAATCCCAGCACTTTGGGAGGCTGAGGTGGGTGGATCACGAGGTCAGGAGTTTGAGACCAGCCTGACCAACATGGTGAAAC;INSERTION=TTAAATAGTTATTTTCAAATAACTTGATGTGATTGTGGAAAACAGTGATAGACAAATCAAAATGACCTCCAACTATAAAGAAAATTCTTGAGCCA;MAPQ=0;MATEID=696542:2;MATENM=1;NM=5;NUMPARTS=2;REPSEQ=CC;SCTG=c_14_48877501_48902501_3C;SECONDARY;SPAN=140937;SUBN=1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:39:17:10.8:118.8,10.8,0:35:8:-118.8:118.8\n14\t49023146\t696542:2\tG\t]14:48882209]G\t99\tPASS\tDISC_MAPQ=56;EVDNC=ASDIS;HOMSEQ=GGTGCAGTGGCTCATGCCTGTAATCCCAGCACTTTGGGAGGCTGAGGTGGGTGGATCACGAGGTCAGGAGTTTGAGACCAGCCTGACCAACATGGTGAAAC;INSERTION=TTAAATAGTTATTTTCAAATAACTTGATGTGATTGTGGAAAACAGTGATAGACAAATCAAAATGACCTCCAACTATAAAGAAAATTCTTGAGCCA;MAPQ=60;MATEID=696542:1;MATENM=5;NM=1;NUMPARTS=2;REPSEQ=CC;SCTG=c_14_48877501_48902501_3C;SECONDARY;SPAN=140937;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:39:17:10.8:118.8,10.8,0:35:8:-118.8:118.8\n14\t49725332\t696842:1\tA\t]14:49725627]A\t99\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;INSERTION=ATAAAAATAATAATGTAATAAACTGCAAAAATT;MAPQ=60;MATEID=696842:2;MATENM=2;NM=1;NUMPARTS=2;SCTG=c_14_49710501_49735501_8C;SPAN=295;SUBN=5;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:43:86:98:117.8,0,98:42:9:-117.9:117.9\n14\t49725627\t696842:2\tT\tT[14:49725332[\t99\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;INSERTION=ATAAAAATAATAATGTAATAAACTGCAAAAATT;MAPQ=60;MATEID=696842:1;MATENM=1;NM=2;NUMPARTS=2;SCTG=c_14_49710501_49735501_8C;SPAN=295;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:43:86:98:117.8,0,98:42:9:-117.9:117.9\n14\t50942183\t697371:1\tC\tC[14:50942828[\t79\tPASS\tDISC_MAPQ=57;EVDNC=ASDIS;INSERTION=TCTGTCTC;MAPQ=60;MATEID=697371:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_50935501_50960501_74C;SPAN=645;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:24:26:7.2:79.2,7.2,0:16:18:-78.56:78.56\n14\t50942828\t697371:2\tA\t]14:50942183]A\t79\tPASS\tDISC_MAPQ=58;EVDNC=ASDIS;INSERTION=TCTGTCTC;MAPQ=60;MATEID=697371:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_50935501_50960501_74C;SPAN=645;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:24:26:7.2:79.2,7.2,0:16:18:-78.56:78.56\n14\t51134695\t697453:1\tT\tT[14:51134990[\t46\tPASS\tEVDNC=ASSMB;HOMSEQ=TTTTTTTTT;MAPQ=60;MATEID=697453:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_51131501_51156501_45C;SPAN=295;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:16:22:7.1:46.7,0,7.1:16:0:-48.1:48.1\n14\t51134990\t697453:2\tT\t]14:51134695]T\t46\tPASS\tEVDNC=ASSMB;HOMSEQ=TTTTTTTTT;MAPQ=60;MATEID=697453:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_51131501_51156501_45C;SPAN=295;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:16:22:7.1:46.7,0,7.1:16:0:-48.1:48.1\n14\t52201132\t697857:2\tG\tG[4:169359842[\t46\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=697857:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=4:169359842(-)-14:52201132(+)__14_52185001_52210001D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:15:15:4.2:46.2,4.2,0:0:15:-46.21:46.21\n14\t52425216\t697955:2\tT\t]4:60231729]T\t26\tPASS\tEVDNC=ASSMB;HOMSEQ=T;MAPQ=60;MATEID=697955:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_14_52405501_52430501_22C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:12:3.2:26.3,0,3.2:9:0:-27.29:27.29\n14\t52475035\t933494:1\tA\t]X:64507376]A\t42\tPASS\tDISC_MAPQ=38;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=933494:2;MATENM=0;NM=3;NUMPARTS=2;SCTG=c_23_64484001_64509001_20C;SPAN=-1;SUBN=4;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:14:4:3.9:42.9,3.9,0:10:9:-42.91:42.91\n14\t52476005\t697967:2\tT\tT[4:60232158[\t22\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=T;MAPQ=60;MATEID=697967:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_52454501_52479501_37C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:25:22.7:22.7,0,39.2:7:8:-22.68:22.95\n14\t54243631\t698723:1\tA\tA[14:54246968[\t34\tPASS\tEVDNC=ASSMB;HOMSEQ=TGA;MAPQ=60;MATEID=698723:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_54243001_54268001_35C;SPAN=3337;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:30:34.4:34.4,0,41:13:0:-34.48:34.51\n14\t54246968\t698723:2\tT\t]14:54243631]T\t34\tPASS\tEVDNC=ASSMB;HOMSEQ=TGA;MAPQ=60;MATEID=698723:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_54243001_54268001_35C;SPAN=3337;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:30:34.4:34.4,0,41:13:0:-34.48:34.51\n14\t54749560\t698839:2\tG\t]4:153256883]G\t22\tPASS\tEVDNC=ASSMB;INSERTION=CAAAACGCTAACAAAATAAATAG;MAPQ=60;MATEID=698839:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_54733001_54758001_25C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:25:22.7:22.7,0,39.2:9:0:-22.68:22.95\n14\t54941811\t13082:2\tA\t]1:53955314]A\t28\tPASS\tDISC_MAPQ=51;EVDNC=DSCRD;IMPRECISE;MAPQ=51;MATEID=13082:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:53955314(+)-14:54941811(-)__1_53949001_53974001D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:16:8.9:28.7,0,8.9:0:10:-28.89:28.89\n14\t55912669\t699197:2\tC\tC[4:153172444[\t36\tPASS\tDISC_MAPQ=58;EVDNC=ASDIS;MAPQ=60;MATEID=699197:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_55909001_55934001_46C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:23:20:36.5,0,20:11:9:-36.66:36.66\n14\t56200143\t699337:1\tA\t]14:56200312]A\t52\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=699337:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_56178501_56203501_117C;SPAN=169;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:21:62:52.1:52.1,0,101.6:21:0:-51.89:52.86\n14\t56200312\t699337:2\tT\tT[14:56200143[\t52\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=699337:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_56178501_56203501_117C;SPAN=169;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:21:62:52.1:52.1,0,101.6:21:0:-51.89:52.86\n14\t57720286\t699947:1\tC\t]22:28669457]C\t19\tPASS\tEVDNC=ASSMB;HOMSEQ=CA;MAPQ=60;MATEID=699947:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_57697501_57722501_12C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:26:19.1:19.1,0,45.5:8:0:-19.1:19.73\n14\t57720286\t916297:1\tC\t[22:28669458[C\t18\tPASS\tDISC_MAPQ=60;EVDNC=TSI_G;HOMSEQ=CA;INSERTION=GTGACTGAATCCCAAAATTATATTGGTAACATGGAAATTCCTGATAGGGGAAGAATATTCCCAGAAGTGTGACCAGTTAGGGCCAAAATAAAAGGTA;MAPQ=60;MATEID=916297:2;MATENM=0;NM=0;NUMPARTS=3;SCTG=c_22_28665001_28690001_91C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:15:111:18.5:18.5,0,259.4:15:2:-18.31:30.92\n14\t59078595\t700449:1\tG\tG[14:59078888[\t31\tPASS\tEVDNC=ASSMB;HOMSEQ=AAATAATACTTTTAG;MAPQ=60;MATEID=700449:2;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_14_59069501_59094501_45C;SPAN=293;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:29:31.4:31.4,0,41.3:12:0:-31.46:31.54\n14\t59078888\t700449:2\tA\t]14:59078595]A\t31\tPASS\tEVDNC=ASSMB;HOMSEQ=AAATAATACTTTTAG;MAPQ=60;MATEID=700449:1;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_14_59069501_59094501_45C;SPAN=293;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:29:31.4:31.4,0,41.3:12:0:-31.46:31.54\n14\t60447081\t700919:1\tA\t[14:60474536[A\t31\tPASS\tDISC_MAPQ=48;EVDNC=DSCRD;IMPRECISE;MAPQ=48;MATEID=700919:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=14:60447081(-)-14:60474536(-)__14_60466001_60491001D;SPAN=27455;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:17:8.6:31.7,0,8.6:0:11:-32.06:32.06\n14\t60474536\t700919:2\tT\t[14:60447081[T\t31\tPASS\tDISC_MAPQ=17;EVDNC=DSCRD;IMPRECISE;MAPQ=17;MATEID=700919:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=14:60447081(-)-14:60474536(-)__14_60466001_60491001D;SPAN=27455;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:17:8.6:31.7,0,8.6:0:11:-32.06:32.06\n14\t61081182\t701090:1\tA\t]14:61081313]A\t44\tPASS\tEVDNC=ASSMB;HOMSEQ=A;MAPQ=60;MATEID=701090:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_61078501_61103501_19C;SPAN=131;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:18:54:44.3:44.3,0,90.5:18:0:-44.24:45.15\n14\t61081313\t701090:2\tA\tA[14:61081182[\t44\tPASS\tEVDNC=ASSMB;HOMSEQ=A;MAPQ=60;MATEID=701090:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_61078501_61103501_19C;SPAN=131;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:18:54:44.3:44.3,0,90.5:18:0:-44.24:45.15\n14\t61172785\t701114:1\tA\t]14:61172905]A\t74\tPASS\tEVDNC=ASSMB;HOMSEQ=A;MAPQ=60;MATEID=701114:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_61152001_61177001_23C;SPAN=120;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:28:63:74.9:74.9,0,81.5:28:0:-74.72:74.75\n14\t61172905\t701114:2\tA\tA[14:61172785[\t74\tPASS\tEVDNC=ASSMB;HOMSEQ=A;MAPQ=60;MATEID=701114:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_61152001_61177001_23C;SPAN=120;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:28:63:74.9:74.9,0,81.5:28:0:-74.72:74.75\n14\t62759566\t701678:2\tA\t[14:46648665[A\t99\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;MAPQ=60;MATEID=701678:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_62744501_62769501_35C;SPAN=16110901;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:38:17:10.5:115.5,10.5,0:31:15:-115.5:115.5\n14\t63420770\t701926:1\tA\tA[14:63421085[\t53\tPASS\tEVDNC=ASSMB;HOMSEQ=AAAAAGTCAACCTGA;MAPQ=60;MATEID=701926:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_63406001_63431001_6C;SPAN=315;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:18:23:3.5:53,0,3.5:18:0:-55.29:55.29\n14\t63421085\t701926:2\tA\t]14:63420770]A\t53\tPASS\tEVDNC=ASSMB;HOMSEQ=AAAAAGTCAACCTGA;MAPQ=60;MATEID=701926:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_63406001_63431001_6C;SPAN=315;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:18:23:3.5:53,0,3.5:18:0:-55.29:55.29\n14\t64280428\t702277:2\tG\t]9:30288184]G\t33\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=702277:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_64263501_64288501_38C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:22:20.3:33.5,0,20.3:12:0:-33.55:33.55\n14\t64280468\t809228:1\tG\tG[17:57501629[\t21\tPASS\tEVDNC=ASSMB;INSERTION=AGAACTTGTTTTATTCACCTCATCCC;MAPQ=60;MATEID=809228:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_17_57501501_57526501_45C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:19:21.2:21.2,0,24.5:8:0:-21.07:21.11\n14\t64893678\t702536:1\tC\tC[14:64896823[\t64\tPASS\tEVDNC=ASSMB;HOMSEQ=AAGAATTTTC;MAPQ=60;MATEID=702536:2;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_14_64876001_64901001_87C;SPAN=3145;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:22:31:11.3:64.1,0,11.3:22:0:-65.69:65.69\n14\t64896823\t702536:2\tA\t]14:64893678]A\t64\tPASS\tEVDNC=ASSMB;HOMSEQ=AAGAATTTTC;MAPQ=60;MATEID=702536:1;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_14_64876001_64901001_87C;SPAN=3145;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:22:31:11.3:64.1,0,11.3:22:0:-65.69:65.69\n14\t64980572\t702567:2\tG\t]2:193680440]G\t44\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=702567:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=2:193680440(+)-14:64980572(-)__14_64974001_64999001D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:16:31:31.1:44.3,0,31.1:0:16:-44.17:44.17\n14\t65139670\t702623:1\tC\tC[14:65141330[\t99\tPASS\tDISC_MAPQ=47;EVDNC=ASDIS;HOMSEQ=GGTTCAAGCGATTCTCCTGCCTCAGCCTCCC;MAPQ=60;MATEID=702623:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_14_65121001_65146001_14C;SPAN=1660;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:44:33:12.3:135.3,12.3,0:26:28:-135.3:135.3\n14\t65141330\t702623:2\tG\t]14:65139670]G\t99\tPASS\tDISC_MAPQ=55;EVDNC=ASDIS;HOMSEQ=GGTTCAAGCGATTCTCCTGCCTCAGCCTCCC;MAPQ=60;MATEID=702623:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_14_65121001_65146001_14C;SPAN=1660;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:44:33:12.3:135.3,12.3,0:26:28:-135.3:135.3\n14\t65375817\t702738:1\tG\t[14:65376623[G\t33\tPASS\tDISC_MAPQ=55;EVDNC=DSCRD;IMPRECISE;MAPQ=55;MATEID=702738:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=14:65375817(-)-14:65376623(-)__14_65366001_65391001D;SPAN=806;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:34:33.5:33.5,0,50:0:13:-33.36:33.58\n14\t65375930\t702740:1\tA\tA]14:65376501]\t79\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=702740:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=14:65375930(+)-14:65376501(+)__14_65366001_65391001D;SPAN=571;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:26:26:7.2:79.2,7.2,0:0:26:-79.22:79.22\n14\t65376501\t702740:2\tC\tC]14:65375930]\t79\tPASS\tDISC_MAPQ=58;EVDNC=DSCRD;IMPRECISE;MAPQ=58;MATEID=702740:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=14:65375930(+)-14:65376501(+)__14_65366001_65391001D;SPAN=571;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:26:26:7.2:79.2,7.2,0:0:26:-79.22:79.22\n14\t65376623\t702738:2\tG\t[14:65375817[G\t33\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=702738:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=14:65375817(-)-14:65376623(-)__14_65366001_65391001D;SPAN=806;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:34:33.5:33.5,0,50:0:13:-33.36:33.58\n14\t65433282\t702815:1\tT\t]14:65599914]T\t32\tPASS\tEVDNC=ASSMB;HOMSEQ=TGCT;MAPQ=60;MATEID=702815:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_65586501_65611501_53C;SPAN=166632;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:27:32:32,0,35.3:12:0:-32.02:32.04\n14\t65599914\t702815:2\tT\tT[14:65433282[\t32\tPASS\tEVDNC=ASSMB;HOMSEQ=TGCT;MAPQ=60;MATEID=702815:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_65586501_65611501_53C;SPAN=166632;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:27:32:32,0,35.3:12:0:-32.02:32.04\n14\t65602452\t702822:1\tG\tG[14:65611229[\t53\tPASS\tDISC_MAPQ=55;EVDNC=DSCRD;IMPRECISE;MAPQ=55;MATEID=702822:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=14:65602452(+)-14:65611229(-)__14_65611001_65636001D;SPAN=8777;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:19:32:24.2:53.9,0,24.2:0:19:-54.21:54.21\n14\t65611229\t702822:2\tA\t]14:65602452]A\t53\tPASS\tDISC_MAPQ=52;EVDNC=DSCRD;IMPRECISE;MAPQ=52;MATEID=702822:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=14:65602452(+)-14:65611229(-)__14_65611001_65636001D;SPAN=8777;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:19:32:24.2:53.9,0,24.2:0:19:-54.21:54.21\n14\t68136341\t703476:1\tC\tC[14:68137015[\t78\tPASS\tEVDNC=ASSMB;HOMSEQ=CCTGTAATCCCAGCACTTTGGGAGGCC;MAPQ=60;MATEID=703476:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_68134501_68159501_47C;SPAN=674;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:27:37:12.8:78.8,0,12.8:27:0:-81.25:81.25\n14\t68137015\t703476:2\tC\t]14:68136341]C\t78\tPASS\tEVDNC=ASSMB;HOMSEQ=CCTGTAATCCCAGCACTTTGGGAGGCC;MAPQ=60;MATEID=703476:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_68134501_68159501_47C;SPAN=674;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:27:37:12.8:78.8,0,12.8:27:0:-81.25:81.25\n14\t68441295\t703565:1\tC\tC]14:68831305]\t22\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=703565:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=14:68441295(+)-14:68831305(+)__14_68428501_68453501D;SPAN=390010;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:15:15.5:22.1,0,15.5:0:8:-22.25:22.25\n14\t68831305\t703565:2\tT\tT]14:68441295]\t22\tPASS\tDISC_MAPQ=53;EVDNC=DSCRD;IMPRECISE;MAPQ=53;MATEID=703565:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=14:68441295(+)-14:68831305(+)__14_68428501_68453501D;SPAN=390010;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:15:15.5:22.1,0,15.5:0:8:-22.25:22.25\n14\t69277912\t703848:2\tC\tC[14:41200462[\t18\tPASS\tDISC_MAPQ=26;EVDNC=ASDIS;HOMSEQ=GCC;MAPQ=60;MATEID=703848:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_69261501_69286501_67C;SPAN=28077450;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:7:16:18.8:18.8,0,18.8:1:7:-18.61:18.62\n14\t69313596\t703864:1\tC\t]14:69313758]C\t47\tPASS\tEVDNC=ASSMB;HOMSEQ=CAG;MAPQ=60;MATEID=703864:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_14_69310501_69335501_58C;SPAN=162;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:19:56:47:47,0,93.2:19:0:-46.98:47.84\n14\t69313758\t703864:2\tG\tG[14:69313596[\t47\tPASS\tEVDNC=ASSMB;HOMSEQ=CAG;MAPQ=60;MATEID=703864:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_14_69310501_69335501_58C;SPAN=162;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:19:56:47:47,0,93.2:19:0:-46.98:47.84\n14\t72112667\t704667:1\tG\t]14:72167699]G\t40\tPASS\tEVDNC=ASSMB;INSERTION=TAGTGCTAAAATA;MAPQ=60;MATEID=704667:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_14_72152501_72177501_19C;SPAN=55032;SUBN=1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:21:10.7:40.4,0,10.7:14:0:-41.11:41.11\n14\t72167699\t704667:2\tA\tA[14:72112667[\t40\tPASS\tEVDNC=ASSMB;INSERTION=TAGTGCTAAAATA;MAPQ=60;MATEID=704667:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_14_72152501_72177501_19C;SPAN=55032;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:21:10.7:40.4,0,10.7:14:0:-41.11:41.11\n14\t72444798\t704776:1\tC\t]14:72444882]C\t99\tPASS\tDISC_MAPQ=255;EVDNC=TSI_G;INSERTION=CACCTGTTCAACCCTGGGGAGAAGACCCCAGGTTGGTGACCCCTGGTTTAGGACCA;MAPQ=60;MATEID=704776:2;MATENM=0;NM=0;NUMPARTS=3;SCTG=c_14_72422001_72447001_10C;SPAN=84;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:41:64:41.6:117.5,0,41.6:41:0:-119.2:119.2\n14\t72444882\t704776:2\tC\tC[14:72444798[\t99\tPASS\tDISC_MAPQ=255;EVDNC=TSI_G;INSERTION=CACCTGTTCAACCCTGGGGAGAAGACCCCAGGTTGGTGACCCCTGGTTTAGGACCA;MAPQ=60;MATEID=704776:1;MATENM=0;NM=0;NUMPARTS=3;SCTG=c_14_72422001_72447001_10C;SPAN=84;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:41:64:41.6:117.5,0,41.6:41:0:-119.2:119.2\n14\t72639639\t704857:1\tA\tA[14:72640358[\t46\tPASS\tEVDNC=ASSMB;HOMSEQ=CAGA;MAPQ=60;MATEID=704857:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_72618001_72643001_54C;SPAN=719;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:16:24:13.1:46.1,0,13.1:16:0:-46.99:46.99\n14\t72640358\t704857:2\tC\t]14:72639639]C\t46\tPASS\tEVDNC=ASSMB;HOMSEQ=CAGA;MAPQ=60;MATEID=704857:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_72618001_72643001_54C;SPAN=719;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:16:24:13.1:46.1,0,13.1:16:0:-46.99:46.99\n14\t76216190\t330018:2\tG\t[6:19764886[G\t92\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;INSERTION=G;MAPQ=60;MATEID=330018:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_6_19747001_19772001_3C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:31:14:8.4:92.4,8.4,0:28:15:-92.42:92.42\n14\t76531614\t706461:1\tG\tG[14:76532816[\t38\tPASS\tEVDNC=ASSMB;HOMSEQ=CAG;MAPQ=60;MATEID=706461:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_14_76513501_76538501_40C;SPAN=1202;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:26:25.7:38.9,0,25.7:14:0:-39.03:39.03\n14\t76532816\t706461:2\tC\t]14:76531614]C\t38\tPASS\tEVDNC=ASSMB;HOMSEQ=CAG;MAPQ=55;MATEID=706461:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_14_76513501_76538501_40C;SPAN=1202;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:26:25.7:38.9,0,25.7:14:0:-39.03:39.03\n14\t77757284\t707096:2\tA\t[14:44082765[A\t46\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=A;MAPQ=60;MATEID=707096:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_77738501_77763501_83C;SPAN=33674519;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:16:22:7.1:46.7,0,7.1:15:3:-48.1:48.1\n14\t77757579\t707094:2\tG\tG[11:66609733[\t20\tPASS\tDISC_MAPQ=56;EVDNC=DSCRD;IMPRECISE;MAPQ=56;MATEID=707094:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=11:66609733(-)-14:77757579(+)__14_77738501_77763501D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:20:20.9:20.9,0,27.5:0:8:-20.79:20.87\n14\t81002783\t708144:1\tT\tT[14:81003084[\t0\tPASS\tEVDNC=ASSMB;HOMSEQ=CTAATGCCTCTT;MAPQ=60;MATEID=708144:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_80997001_81022001_41C;SPAN=301;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/0:16:341:42.8:0,42.8,944:16:0:43.04:25.33\n14\t81003084\t708144:2\tC\t]14:81002783]C\t0\tPASS\tEVDNC=ASSMB;HOMSEQ=CTAATGCCTCTT;MAPQ=60;MATEID=708144:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_80997001_81022001_41C;SPAN=301;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/0:16:341:42.8:0,42.8,944:16:0:43.04:25.33\n14\t81320430\t592458:2\tA\t]11:62074341]A\t99\tPASS\tEVDNC=ASSMB;INSERTION=C;MAPQ=60;MATEID=592458:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_11_62058501_62083501_23C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:33:31:9:99,9,0:33:0:-99.02:99.02\n14\t81411867\t708297:1\tG\tG[14:81414269[\t69\tPASS\tEVDNC=ASSMB;INSERTION=CAGAGTTAAGATAAGCA;MAPQ=60;MATEID=708297:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_81413501_81438501_5C;SPAN=2402;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:23:18:6.3:69.3,6.3,0:23:0:-69.32:69.32\n14\t81414269\t708297:2\tG\t]14:81411867]G\t69\tPASS\tEVDNC=ASSMB;INSERTION=CAGAGTTAAGATAAGCA;MAPQ=60;MATEID=708297:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_81413501_81438501_5C;SPAN=2402;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:23:18:6.3:69.3,6.3,0:23:0:-69.32:69.32\n14\t81668843\t708414:1\tC\t]14:81762140]C\t18\tPASS\tEVDNC=ASSMB;HOMSEQ=CC;MAPQ=60;MATEID=708414:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_81756501_81781501_108C;SPAN=93297;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:27:18.8:18.8,0,48.5:8:0:-18.82:19.57\n14\t81762140\t708414:2\tC\tC[14:81668843[\t18\tPASS\tEVDNC=ASSMB;HOMSEQ=CC;MAPQ=60;MATEID=708414:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_81756501_81781501_108C;SPAN=93297;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:27:18.8:18.8,0,48.5:8:0:-18.82:19.57\n14\t81817963\t708444:1\tT\t]14:81818083]T\t36\tPASS\tEVDNC=ASSMB;INSERTION=CCTTCCTTTCT;MAPQ=22;MATEID=708444:2;MATENM=7;NM=4;NUMPARTS=2;SCTG=c_14_81805501_81830501_94C;SPAN=120;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:15:46:36.8:36.8,0,76.4:15:0:-36.59:37.45\n14\t81818083\t708444:2\tT\tT[14:81817963[\t36\tPASS\tEVDNC=ASSMB;INSERTION=CCTTCCTTTCT;MAPQ=60;MATEID=708444:1;MATENM=4;NM=7;NUMPARTS=2;SCTG=c_14_81805501_81830501_94C;SPAN=120;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:15:46:36.8:36.8,0,76.4:15:0:-36.59:37.45\n14\t81939555\t708465:1\tG\t]14:81942886]G\t17\tPASS\tEVDNC=ASSMB;INSERTION=CCAA;MAPQ=60;MATEID=708465:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_81928001_81953001_22C;SPAN=3331;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:45:17:17,0,96.2:9:0:-17.06:20.24\n14\t81942886\t708465:2\tA\tA[14:81939555[\t17\tPASS\tEVDNC=ASSMB;INSERTION=CCAA;MAPQ=60;MATEID=708465:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_81928001_81953001_22C;SPAN=3331;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:45:17:17,0,96.2:9:0:-17.06:20.24\n14\t82032766\t708490:1\tT\tT[14:82036987[\t22\tPASS\tEVDNC=ASSMB;INSERTION=AACATAAATC;MAPQ=60;MATEID=708490:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_82026001_82051001_54C;SPAN=4221;SUBN=5;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:27:22.1:22.1,0,45.2:9:0:-22.12:22.58\n14\t82036987\t708490:2\tA\t]14:82032766]A\t22\tPASS\tEVDNC=ASSMB;INSERTION=AACATAAATC;MAPQ=60;MATEID=708490:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_82026001_82051001_54C;SPAN=4221;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:27:22.1:22.1,0,45.2:9:0:-22.12:22.58\n14\t83169509\t708910:1\tT\tT[14:83170140[\t50\tPASS\tEVDNC=ASSMB;HOMSEQ=TCCAAAGACCTTTATTT;MAPQ=60;MATEID=708910:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_14_83153001_83178001_88C;SPAN=631;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:19:43:50.6:50.6,0,57.2:19:0:-50.63:50.66\n14\t83170140\t708910:2\tT\t]14:83169509]T\t50\tPASS\tEVDNC=ASSMB;HOMSEQ=TCCAAAGACCTTTATTT;MAPQ=60;MATEID=708910:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_14_83153001_83178001_88C;SPAN=631;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:19:43:50.6:50.6,0,57.2:19:0:-50.63:50.66\n14\t83385696\t708989:1\tA\tA[14:83386020[\t42\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=708989:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_83373501_83398501_6C;SPAN=324;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:15:24:16.4:42.8,0,16.4:15:0:-43.34:43.34\n14\t83386020\t708989:2\tC\t]14:83385696]C\t42\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=708989:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_83373501_83398501_6C;SPAN=324;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:15:24:16.4:42.8,0,16.4:15:0:-43.34:43.34\n14\t83666619\t709085:1\tT\t]14:83678044]T\t48\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=T;MAPQ=60;MATEID=709085:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_83643001_83668001_20C;SPAN=11425;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:17:28:21.8:48.2,0,21.8:12:14:-48.77:48.77\n14\t83678044\t709085:2\tT\tT[14:83666619[\t48\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=T;MAPQ=60;MATEID=709085:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_83643001_83668001_20C;SPAN=11425;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:17:28:21.8:48.2,0,21.8:12:14:-48.77:48.77\n14\t84012128\t709223:1\tC\t]14:84017566]C\t26\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=CA;MAPQ=60;MATEID=709223:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_84010501_84035501_3C;SPAN=5438;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:47:26.6:26.6,0,89.3:5:9:-26.4:28.44\n14\t84017566\t709223:2\tA\tA[14:84012128[\t26\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=CA;MAPQ=60;MATEID=709223:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_84010501_84035501_3C;SPAN=5438;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:47:26.6:26.6,0,89.3:5:9:-26.4:28.44\n14\t84672802\t709441:1\tA\tA[14:84673282[\t85\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=A;MAPQ=60;MATEID=709441:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_14_84672001_84697001_149C;SPAN=480;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:28:24:7.8:85.8,7.8,0:17:19:-85.82:85.82\n14\t84673282\t709441:2\tA\t]14:84672802]A\t85\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=A;MAPQ=60;MATEID=709441:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_14_84672001_84697001_149C;SPAN=480;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:28:24:7.8:85.8,7.8,0:17:19:-85.82:85.82\n14\t84860828\t709538:1\tG\t]14:84867210]G\t18\tPASS\tEVDNC=ASSMB;INSERTION=G;MAPQ=60;MATEID=709538:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_84843501_84868501_49C;SPAN=6382;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:41:18.2:18.2,0,84.2:9:0:-18.18:20.65\n14\t84867210\t709538:2\tA\tA[14:84860828[\t18\tPASS\tEVDNC=ASSMB;INSERTION=G;MAPQ=60;MATEID=709538:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_84843501_84868501_49C;SPAN=6382;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:41:18.2:18.2,0,84.2:9:0:-18.18:20.65\n14\t84948633\t709567:1\tA\t]14:84948843]A\t21\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=709567:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_84941501_84966501_40C;SPAN=210;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:53:21.5:21.5,0,110.6:11:0:-21.41:24.93\n14\t84948843\t709567:2\tA\tA[14:84948633[\t21\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=709567:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_84941501_84966501_40C;SPAN=210;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:53:21.5:21.5,0,110.6:11:0:-21.41:24.93\n14\t86616493\t710249:1\tA\t]14:86637764]A\t35\tPASS\tEVDNC=ASSMB;HOMSEQ=AGGG;MAPQ=60;MATEID=710249:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_86632001_86657001_52C;SPAN=21271;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:26:29:35.6,0,29:13:0:-35.63:35.63\n14\t86637764\t710249:2\tG\tG[14:86616493[\t35\tPASS\tEVDNC=ASSMB;HOMSEQ=AGGG;MAPQ=60;MATEID=710249:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_86632001_86657001_52C;SPAN=21271;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:26:29:35.6,0,29:13:0:-35.63:35.63\n14\t87380711\t710517:1\tA\t]14:87382035]A\t42\tPASS\tEVDNC=ASSMB;HOMSEQ=A;MAPQ=60;MATEID=710517:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_87367001_87392001_6C;SPAN=1324;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:18:59:42.8:42.8,0,105.5:18:0:-42.83:44.31\n14\t87382035\t710517:2\tA\tA[14:87380711[\t42\tPASS\tEVDNC=ASSMB;HOMSEQ=A;MAPQ=60;MATEID=710517:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_87367001_87392001_6C;SPAN=1324;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:18:59:42.8:42.8,0,105.5:18:0:-42.83:44.31\n14\t87391720\t710518:1\tT\tT[14:87392040[\t99\tPASS\tEVDNC=ASSMB;HOMSEQ=AAAATCGT;MAPQ=60;MATEID=710518:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_87367001_87392001_8C;SPAN=320;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:35:23:9.6:105.6,9.6,0:35:0:-105.6:105.6\n14\t87392040\t710518:2\tA\t]14:87391720]A\t99\tPASS\tEVDNC=ASSMB;HOMSEQ=AAAATCGT;MAPQ=60;MATEID=710518:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_87367001_87392001_8C;SPAN=320;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:35:23:9.6:105.6,9.6,0:35:0:-105.6:105.6\n14\t88942494\t711024:1\tC\tC[14:88942735[\t79\tPASS\tEVDNC=ASSMB;HOMSEQ=CCAAAAGCTC;MAPQ=60;MATEID=711024:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_14_88935001_88960001_17C;SPAN=241;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:27:34:3.8:79.7,0,3.8:27:0:-83.31:83.31\n14\t88942735\t711024:2\tC\t]14:88942494]C\t79\tPASS\tEVDNC=ASSMB;HOMSEQ=CCAAAAGCTC;MAPQ=60;MATEID=711024:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_14_88935001_88960001_17C;SPAN=241;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:27:34:3.8:79.7,0,3.8:27:0:-83.31:83.31\n14\t96428716\t714013:1\tA\t]14:96515169]A\t61\tPASS\tDISC_MAPQ=44;EVDNC=ASDIS;INSERTION=TTAATTTTTTAATTTTAAATGATTTAATTTTAA;MAPQ=60;MATEID=714013:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_96505501_96530501_12C;SPAN=86453;SUBN=4;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:21:27:5.6:61.7,0,5.6:19:9:-64.38:64.38\n14\t96515169\t714013:2\tT\tT[14:96428716[\t61\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;INSERTION=TTAATTTTTTAATTTTAAATGATTTAATTTTAA;MAPQ=60;MATEID=714013:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_96505501_96530501_12C;SPAN=86453;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:21:27:5.6:61.7,0,5.6:19:9:-64.38:64.38\n14\t98308198\t714618:1\tG\tG[14:98308510[\t47\tPASS\tEVDNC=ASSMB;HOMSEQ=AAAAAAAAGGAGGAGGGAG;MAPQ=60;MATEID=714618:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_14_98294001_98319001_62C;SPAN=312;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:19:55:47.3:47.3,0,90.2:19:0:-47.26:48.03\n14\t98308510\t714618:2\tA\t]14:98308198]A\t47\tPASS\tEVDNC=ASSMB;HOMSEQ=AAAAAAAAGGAGGAGGGAG;MAPQ=60;MATEID=714618:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_14_98294001_98319001_62C;SPAN=312;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:19:55:47.3:47.3,0,90.2:19:0:-47.26:48.03\n14\t98317666\t714629:1\tT\tT[14:98318751[\t41\tPASS\tEVDNC=ASSMB;HOMSEQ=ATTATGAATTGAAAGATTTTTTT;MAPQ=60;MATEID=714629:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_98318501_98343501_158C;SPAN=1085;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:18:1.7:41.3,0,1.7:14:0:-42.92:42.92\n14\t98318751\t714629:2\tA\t]14:98317666]A\t41\tPASS\tEVDNC=ASSMB;HOMSEQ=ATTATGAATTGAAAGATTTTTTT;MAPQ=60;MATEID=714629:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_98318501_98343501_158C;SPAN=1085;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:18:1.7:41.3,0,1.7:14:0:-42.92:42.92\n14\t101524539\t715689:1\tA\tA[14:101524866[\t24\tPASS\tEVDNC=ASSMB;HOMSEQ=TTTGCCATTA;MAPQ=60;MATEID=715689:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_101503501_101528501_21C;SPAN=327;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:20:24.2:24.2,0,24.2:9:0:-24.09:24.09\n14\t101524866\t715689:2\tT\t]14:101524539]T\t24\tPASS\tEVDNC=ASSMB;HOMSEQ=TTTGCCATTA;MAPQ=60;MATEID=715689:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_101503501_101528501_21C;SPAN=327;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:20:24.2:24.2,0,24.2:9:0:-24.09:24.09\n14\t101998996\t715900:1\tC\t]14:102036556]C\t51\tPASS\tEVDNC=ASSMB;INSERTION=TATAGTCCCAGA;MAPQ=60;MATEID=715900:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_102018001_102043001_94C;SPAN=37560;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:18:28:18.5:51.5,0,18.5:18:0:-52.37:52.37\n14\t102036556\t715900:2\tA\tA[14:101998996[\t51\tPASS\tEVDNC=ASSMB;INSERTION=TATAGTCCCAGA;MAPQ=60;MATEID=715900:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_102018001_102043001_94C;SPAN=37560;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:18:28:18.5:51.5,0,18.5:18:0:-52.37:52.37\n14\t103842390\t716565:2\tC\t[11:66496959[C\t34\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=GGAGG;MAPQ=60;MATEID=716565:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_103831001_103856001_0C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:20:14.3:34.1,0,14.3:10:5:-34.32:34.32\n14\t103896552\t716586:1\tA\t]14:103896896]A\t4\tPASS\tDISC_MAPQ=49;EVDNC=DSCRD;IMPRECISE;MAPQ=49;MATEID=716586:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=14:103896552(-)-14:103896896(+)__14_103880001_103905001D;SPAN=344;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:78:4.7:4.7,0,189.5:0:8:-4.483:15.47\n14\t103896896\t716586:2\tC\tC[14:103896552[\t4\tPASS\tDISC_MAPQ=27;EVDNC=DSCRD;IMPRECISE;MAPQ=27;MATEID=716586:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=14:103896552(-)-14:103896896(+)__14_103880001_103905001D;SPAN=344;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:78:4.7:4.7,0,189.5:0:8:-4.483:15.47\n14\t103910481\t716602:2\tG\tG]11:66501326]\t33\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=G;MAPQ=60;MATEID=716602:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_103904501_103929501_1C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:21:17.3:33.8,0,17.3:8:6:-33.92:33.92\n14\t104206456\t716693:2\tG\t]2:237623393]G\t33\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=716693:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_14_104198501_104223501_154C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:22:20.3:33.5,0,20.3:12:0:-33.55:33.55\n14\t104950889\t717030:1\tG\tG[14:104951841[\t29\tPASS\tDISC_MAPQ=34;EVDNC=DSCRD;IMPRECISE;MAPQ=34;MATEID=717030:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=14:104950889(+)-14:104951841(-)__14_104933501_104958501D;SPAN=952;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:37:29.3:29.3,0,62.3:0:12:-29.21:29.92\n14\t104951841\t717030:2\tC\t]14:104950889]C\t29\tPASS\tDISC_MAPQ=37;EVDNC=DSCRD;IMPRECISE;MAPQ=37;MATEID=717030:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=14:104950889(+)-14:104951841(-)__14_104933501_104958501D;SPAN=952;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:37:29.3:29.3,0,62.3:0:12:-29.21:29.92\n14\t105162463\t717131:1\tC\t]14:105162670]C\t29\tPASS\tEVDNC=ASSMB;HOMSEQ=CCAGGGCACCTTAAAGCCCAGG;MAPQ=60;MATEID=717131:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_14_105154001_105179001_66C;SPAN=207;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:16:85:29:29,0,184.1:16:0:-28.92:35.5\n14\t105162670\t717131:2\tG\tG[14:105162463[\t29\tPASS\tEVDNC=ASSMB;HOMSEQ=CCAGGGCACCTTAAAGCCCAGG;MAPQ=60;MATEID=717131:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_14_105154001_105179001_66C;SPAN=207;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:16:85:29:29,0,184.1:16:0:-28.92:35.5\n14\t105573461\t717396:1\tC\tC[14:105693709[\t52\tPASS\tDISC_MAPQ=40;EVDNC=DSCRD;IMPRECISE;MAPQ=40;MATEID=717396:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=14:105573461(+)-14:105693709(-)__14_105693001_105718001D;SPAN=120248;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:18:14:4.8:52.8,4.8,0:0:18:-52.81:52.81\n14\t105623442\t717296:1\tC\tC[14:105642051[\t5\tPASS\tDISC_MAPQ=42;EVDNC=DSCRD;IMPRECISE;MAPQ=42;MATEID=717296:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=14:105623442(+)-14:105642051(-)__14_105619501_105644501D;SPAN=18609;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:99:5.3:5.3,0,242.9:0:10:-5.182:19.27\n14\t105642051\t717296:2\tT\t]14:105623442]T\t5\tPASS\tDISC_MAPQ=19;EVDNC=DSCRD;IMPRECISE;MAPQ=19;MATEID=717296:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=14:105623442(+)-14:105642051(-)__14_105619501_105644501D;SPAN=18609;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:99:5.3:5.3,0,242.9:0:10:-5.182:19.27\n14\t105646374\t717325:1\tT\t]14:105646476]T\t26\tPASS\tDISC_MAPQ=255;EVDNC=TSI_L;HOMSEQ=TGCCTCCCACCGGCCCTGCTCACCTGTGGCTGC;MAPQ=11;MATEID=717325:2;MATENM=1;NM=3;NUMPARTS=3;REPSEQ=CC;SCTG=c_14_105619501_105644501_306C;SPAN=102;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:9:0:2.4:26.4,2.4,0:9:0:-26.41:26.41\n14\t105646476\t717325:2\tC\tC[14:105646374[\t26\tPASS\tDISC_MAPQ=255;EVDNC=TSI_L;HOMSEQ=TGCCTCCCACCGGCCCTGCTCACCTGTGGCTGC;MAPQ=60;MATEID=717325:1;MATENM=3;NM=1;NUMPARTS=3;REPSEQ=CC;SCTG=c_14_105619501_105644501_306C;SPAN=102;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:9:0:2.4:26.4,2.4,0:9:0:-26.41:26.41\n14\t105693709\t717396:2\tA\t]14:105573461]A\t52\tPASS\tDISC_MAPQ=53;EVDNC=DSCRD;IMPRECISE;MAPQ=53;MATEID=717396:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=14:105573461(+)-14:105693709(-)__14_105693001_105718001D;SPAN=120248;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:18:14:4.8:52.8,4.8,0:0:18:-52.81:52.81\n14\t106249864\t717675:2\tC\t]4:148637296]C\t18\tPASS\tEVDNC=ASSMB;HOMSEQ=C;MAPQ=60;MATEID=717675:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_106232001_106257001_8C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:39:18.8:18.8,0,78.2:9:0:-18.75:20.87\n14\t106300357\t717708:1\tT\tT[14:106300677[\t83\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=CGAATTTTTCATTTCTTTT;MAPQ=60;MATEID=717708:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_106281001_106306001_124C;SPAN=320;SUBN=2;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:30:54:50.9:83.9,0,50.9:24:6:-84.25:84.25\n14\t106300677\t717708:2\tC\t]14:106300357]C\t83\tPASS\tDISC_MAPQ=58;EVDNC=ASDIS;HOMSEQ=CGAATTTTTCATTTCTTTT;MAPQ=41;MATEID=717708:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_14_106281001_106306001_124C;SPAN=320;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:30:54:50.9:83.9,0,50.9:24:6:-84.25:84.25\n14\t106727963\t718064:1\tA\tA[14:106775262[\t99\tPASS\tEVDNC=ASSMB;HOMSEQ=ACAGA;MAPQ=60;MATEID=718064:2;MATENM=0;NM=4;NUMPARTS=2;SCTG=c_14_106771001_106796001_94C;SPAN=47299;SUBN=5;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:36:25:9.9:108.9,9.9,0:36:0:-108.9:108.9\n14\t106775262\t718064:2\tA\t]14:106727963]A\t99\tPASS\tEVDNC=ASSMB;HOMSEQ=ACAGA;MAPQ=60;MATEID=718064:1;MATENM=4;NM=0;NUMPARTS=2;SCTG=c_14_106771001_106796001_94C;SPAN=47299;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:36:25:9.9:108.9,9.9,0:36:0:-108.9:108.9\n15\t17009488\t718140:1\tA\t]15:17481101]A\t26\tPASS\tDISC_MAPQ=49;EVDNC=DSCRD;IMPRECISE;MAPQ=49;MATEID=718140:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=15:17009488(-)-15:17481101(+)__15_17003001_17028001D;SPAN=471613;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:35:26.6:26.6,0,59.6:0:11:-26.47:27.25\n15\t17090500\t718529:1\tT\t]15:17093747]T\t99\tPASS\tDISC_MAPQ=23;EVDNC=ASDIS;HOMSEQ=TAAAAACTACGCAGA;MAPQ=60;MATEID=718529:2;MATENM=10;NM=1;NUMPARTS=2;SCTG=c_15_17076501_17101501_143C;SPAN=3247;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:79:33:21.9:240.9,21.9,0:64:15:-241:241\n15\t17090542\t718583:1\tT\t]15:17103384]T\t21\tPASS\tDISC_MAPQ=32;EVDNC=DSCRD;IMPRECISE;MAPQ=32;MATEID=718583:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=15:17090542(-)-15:17103384(+)__15_17101001_17126001D;SPAN=12842;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:42:21.2:21.2,0,83.9:0:10:-21.2:23.34\n15\t17093747\t718540:1\tA\tA[15:17163323[\t99\tPASS\tDISC_MAPQ=9;EVDNC=ASDIS;HOMSEQ=TAAAAACTACGCAGA;MAPQ=32;MATEID=718540:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_15_17076501_17101501_72C;SPAN=69576;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:67:14:18.6:204.6,18.6,0:59:8:-204.7:204.7\n15\t17093747\t718529:2\tA\tA[15:17090500[\t99\tPASS\tDISC_MAPQ=7;EVDNC=ASDIS;HOMSEQ=TAAAAACTACGCAGA;MAPQ=30;MATEID=718529:1;MATENM=1;NM=10;NUMPARTS=2;SCTG=c_15_17076501_17101501_143C;SPAN=3247;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:79:33:21.9:240.9,21.9,0:64:15:-241:241\n15\t17103384\t718583:2\tC\tC[15:17090542[\t21\tPASS\tDISC_MAPQ=27;EVDNC=DSCRD;IMPRECISE;MAPQ=27;MATEID=718583:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=15:17090542(-)-15:17103384(+)__15_17101001_17126001D;SPAN=12842;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:42:21.2:21.2,0,83.9:0:10:-21.2:23.34\n15\t17103407\t718596:1\tA\tA[15:17163364[\t18\tPASS\tDISC_MAPQ=35;EVDNC=DSCRD;IMPRECISE;MAPQ=35;MATEID=718596:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=15:17103407(+)-15:17163364(-)__15_17101001_17126001D;SPAN=59957;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:27:18.8:18.8,0,48.5:0:8:-18.82:19.57\n15\t17103493\t718685:1\tT\tT[15:17494314[\t49\tPASS\tDISC_MAPQ=53;EVDNC=DSCRD;IMPRECISE;MAPQ=53;MATEID=718685:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=15:17103493(+)-15:17494314(-)__15_17493001_17518001D;SPAN=390821;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:17:9:4.5:49.5,4.5,0:0:17:-49.51:49.51\n15\t17163323\t718540:2\tT\t]15:17093747]T\t99\tPASS\tDISC_MAPQ=14;EVDNC=ASDIS;HOMSEQ=TAAAAACTACGCAGA;MAPQ=54;MATEID=718540:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_15_17076501_17101501_72C;SPAN=69576;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:67:14:18.6:204.6,18.6,0:59:8:-204.7:204.7\n15\t17163364\t718596:2\tA\t]15:17103407]A\t18\tPASS\tDISC_MAPQ=18;EVDNC=DSCRD;IMPRECISE;MAPQ=18;MATEID=718596:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=15:17103407(+)-15:17163364(-)__15_17101001_17126001D;SPAN=59957;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:27:18.8:18.8,0,48.5:0:8:-18.82:19.57\n15\t17481101\t718140:2\tT\tT[15:17009488[\t26\tPASS\tDISC_MAPQ=36;EVDNC=DSCRD;IMPRECISE;MAPQ=36;MATEID=718140:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=15:17009488(-)-15:17481101(+)__15_17003001_17028001D;SPAN=471613;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:35:26.6:26.6,0,59.6:0:11:-26.47:27.25\n15\t17494314\t718685:2\tG\t]15:17103493]G\t49\tPASS\tDISC_MAPQ=15;EVDNC=DSCRD;IMPRECISE;MAPQ=15;MATEID=718685:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=15:17103493(+)-15:17494314(-)__15_17493001_17518001D;SPAN=390821;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:17:9:4.5:49.5,4.5,0:0:17:-49.51:49.51\n15\t18358071\t718981:1\tT\t]15:19563836]T\t0\tPASS\tDISC_MAPQ=26;EVDNC=DSCRD;IMPRECISE;MAPQ=26;MATEID=718981:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=15:18358071(-)-15:19563836(+)__15_19551001_19576001D;SPAN=1205765;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/0:13:214:16.9:0,16.9,571:0:13:17.24:22.07\n15\t19563836\t718981:2\tA\tA[15:18358071[\t0\tPASS\tDISC_MAPQ=24;EVDNC=DSCRD;IMPRECISE;MAPQ=24;MATEID=718981:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=15:18358071(-)-15:19563836(+)__15_19551001_19576001D;SPAN=1205765;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/0:13:214:16.9:0,16.9,571:0:13:17.24:22.07\n15\t20340255\t719837:1\tG\t]15:20342236]G\t15\tPASS\tEVDNC=ASSMB;HOMSEQ=GCCAAGCCAGCCAGCCAGCCAAGCCAGCCAAGCCAGC;MAPQ=60;MATEID=719837:2;MATENM=2;NM=1;NUMPARTS=2;SCTG=c_15_20335001_20360001_235C;SPAN=1981;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:20:181:15.1:15.1,0,440.9:20:0:-15.14:39.36\n15\t20340976\t719853:1\tG\t]15:20342557]G\t0\tPASS\tEVDNC=ASSMB;HOMSEQ=GCCAGCCAAGCCAGCC;MAPQ=60;MATEID=719853:2;MATENM=2;NM=3;NUMPARTS=2;SCTG=c_15_20335001_20360001_516C;SPAN=1581;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/0:10:293:49.1:0,49.1,835.1:10:0:49.35:14.43\n15\t20342236\t719837:2\tC\tC[15:20340255[\t15\tPASS\tEVDNC=ASSMB;HOMSEQ=GCCAAGCCAGCCAGCCAGCCAAGCCAGCCAAGCCAGC;MAPQ=60;MATEID=719837:1;MATENM=1;NM=2;NUMPARTS=2;SCTG=c_15_20335001_20360001_235C;SPAN=1981;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:20:181:15.1:15.1,0,440.9:20:0:-15.14:39.36\n15\t20342557\t719853:2\tC\tC[15:20340976[\t0\tPASS\tEVDNC=ASSMB;HOMSEQ=GCCAGCCAAGCCAGCC;MAPQ=60;MATEID=719853:1;MATENM=3;NM=2;NUMPARTS=2;SCTG=c_15_20335001_20360001_516C;SPAN=1581;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/0:10:293:49.1:0,49.1,835.1:10:0:49.35:14.43\n15\t20376251\t719952:1\tG\tG[15:20384361[\t83\tPASS\tDISC_MAPQ=52;EVDNC=ASDIS;HOMSEQ=AATACTATGCAGCCATAAGAAAGGATGAGTTCATGTCCTTTG;MAPQ=58;MATEID=719952:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_15_20359501_20384501_234C;SPAN=8110;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:33:89:83.9:83.9,0,140:19:15:-83.92:84.69\n15\t20384361\t719952:2\tA\t]15:20376251]A\t83\tPASS\tDISC_MAPQ=39;EVDNC=ASDIS;HOMSEQ=AATACTATGCAGCCATAAGAAAGGATGAGTTCATGTCCTTTG;MAPQ=41;MATEID=719952:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_15_20359501_20384501_234C;SPAN=8110;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:33:89:83.9:83.9,0,140:19:15:-83.92:84.69\n15\t23961921\t721360:1\tC\tC[15:23962220[\t39\tPASS\tEVDNC=ASSMB;HOMSEQ=AAAATTACTCC;MAPQ=60;MATEID=721360:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_15_23961001_23986001_113C;SPAN=299;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:12:13:3.6:39.6,3.6,0:12:0:-39.28:39.28\n15\t23962220\t721360:2\tA\t]15:23961921]A\t39\tPASS\tEVDNC=ASSMB;HOMSEQ=AAAATTACTCC;MAPQ=60;MATEID=721360:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_15_23961001_23986001_113C;SPAN=299;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:12:13:3.6:39.6,3.6,0:12:0:-39.28:39.28\n15\t25686249\t722044:1\tG\tG[15:25687234[\t35\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;MAPQ=60;MATEID=722044:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_15_25676001_25701001_104C;SPAN=985;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:27:32:35.3,0,32:8:10:-35.33:35.33\n15\t25687234\t722044:2\tG\t]15:25686249]G\t35\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;MAPQ=60;MATEID=722044:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_15_25676001_25701001_104C;SPAN=985;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:27:32:35.3,0,32:8:10:-35.33:35.33\n15\t29700693\t723297:2\tA\t[9:117377297[A\t39\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=723297:1;MATENM=0;NM=0;NUMPARTS=3;SCTG=c_15_29694001_29719001_68C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:13:13:3.6:39.6,3.6,0:6:8:-39.61:39.61\n15\t30173126\t723413:2\tG\t]1:202625106]G\t31\tPASS\tDISC_MAPQ=6;EVDNC=TSI_L;HOMSEQ=GTGTGTGG;INSERTION=TGTTGTGTGTGGCCTGTAATAGG;MAPQ=60;MATEID=723413:1;MATENM=1;NM=0;NUMPARTS=3;REPSEQ=GTGTGTGT;SCTG=c_15_30159501_30184501_42C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:20:33:11:31,0,11:10:10:-31.29:31.29\n15\t31950557\t723963:1\tT\t]15:31956568]T\t26\tPASS\tEVDNC=ASSMB;HOMSEQ=TG;MAPQ=60;MATEID=723963:2;MATENM=0;NM=1;NUMPARTS=3;SCTG=c_15_31948001_31973001_63C;SPAN=6011;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:34:26.9:26.9,0,56.6:11:0:-26.75:27.42\n15\t31956568\t723963:2\tG\tG[15:31950557[\t26\tPASS\tEVDNC=ASSMB;HOMSEQ=TG;MAPQ=60;MATEID=723963:1;MATENM=1;NM=0;NUMPARTS=3;SCTG=c_15_31948001_31973001_63C;SPAN=6011;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:34:26.9:26.9,0,56.6:11:0:-26.75:27.42\n15\t31999032\t723972:1\tT\tT[15:31999326[\t42\tPASS\tEVDNC=ASSMB;HOMSEQ=CAGCTCGTGGTTTTT;MAPQ=60;MATEID=723972:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_15_31997001_32022001_54C;SPAN=294;SUBN=2;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:14:17:1.2:42.9,1.2,0:14:0:-43.71:43.71\n15\t31999326\t723972:2\tC\t]15:31999032]C\t42\tPASS\tEVDNC=ASSMB;HOMSEQ=CAGCTCGTGGTTTTT;MAPQ=60;MATEID=723972:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_15_31997001_32022001_54C;SPAN=294;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:14:17:1.2:42.9,1.2,0:14:0:-43.71:43.71\n15\t34449542\t724964:1\tA\tA[15:34449833[\t23\tPASS\tDISC_MAPQ=58;EVDNC=ASDIS;INSERTION=TTGGAAGCTA;MAPQ=60;MATEID=724964:2;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_15_34447001_34472001_8C;SPAN=291;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:8:5:2.1:23.1,2.1,0:5:4:-23.11:23.11\n15\t34449833\t724964:2\tA\t]15:34449542]A\t23\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;INSERTION=TTGGAAGCTA;MAPQ=60;MATEID=724964:1;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_15_34447001_34472001_8C;SPAN=291;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:8:5:2.1:23.1,2.1,0:5:4:-23.11:23.11\n15\t34716832\t725053:1\tT\tT[15:34717151[\t52\tPASS\tEVDNC=ASSMB;HOMSEQ=CCAAGCAGTGGCTTTCT;MAPQ=60;MATEID=725053:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_15_34716501_34741501_34C;SPAN=319;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:18:24:6.5:52.7,0,6.5:18:0:-54.59:54.59\n15\t34717151\t725053:2\tC\t]15:34716832]C\t52\tPASS\tEVDNC=ASSMB;HOMSEQ=CCAAGCAGTGGCTTTCT;MAPQ=60;MATEID=725053:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_15_34716501_34741501_34C;SPAN=319;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:18:24:6.5:52.7,0,6.5:18:0:-54.59:54.59\n15\t38974815\t726371:1\tT\tT[15:38975158[\t72\tPASS\tEVDNC=ASSMB;HOMSEQ=GAAAAATTTATT;MAPQ=60;MATEID=726371:2;MATENM=3;NM=1;NUMPARTS=2;SCTG=c_15_38955001_38980001_114C;SPAN=343;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:24:23:6.6:72.6,6.6,0:24:0:-72.62:72.62\n15\t38975158\t726371:2\tG\t]15:38974815]G\t72\tPASS\tEVDNC=ASSMB;HOMSEQ=GAAAAATTTATT;MAPQ=60;MATEID=726371:1;MATENM=1;NM=3;NUMPARTS=2;SCTG=c_15_38955001_38980001_114C;SPAN=343;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:24:23:6.6:72.6,6.6,0:24:0:-72.62:72.62\n15\t39080194\t726424:1\tA\tA[15:39081260[\t39\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGATTACAGGCA;MAPQ=60;MATEID=726424:2;MATENM=9;NM=1;NUMPARTS=2;SCTG=c_15_39077501_39102501_79C;SPAN=1066;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:13:12:3.6:39.6,3.6,0:7:7:-39.61:39.61\n15\t39081260\t726424:2\tT\t]15:39080194]T\t39\tPASS\tDISC_MAPQ=40;EVDNC=ASDIS;HOMSEQ=TTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGATTACAGGCA;MAPQ=60;MATEID=726424:1;MATENM=1;NM=9;NUMPARTS=2;SCTG=c_15_39077501_39102501_79C;SPAN=1066;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:13:12:3.6:39.6,3.6,0:7:7:-39.61:39.61\n15\t39452190\t726529:1\tA\tA[15:39452659[\t89\tPASS\tEVDNC=ASSMB;HOMSEQ=A;MAPQ=60;MATEID=726529:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_15_39445001_39470001_11C;SPAN=469;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:29:28:8.1:89.1,8.1,0:29:0:-89.12:89.12\n15\t39452659\t726529:2\tA\t]15:39452190]A\t89\tPASS\tEVDNC=ASSMB;HOMSEQ=A;MAPQ=60;MATEID=726529:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_15_39445001_39470001_11C;SPAN=469;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:29:28:8.1:89.1,8.1,0:29:0:-89.12:89.12\n15\t39702424\t629585:2\tA\t]12:56596312]A\t85\tPASS\tEVDNC=ASSMB;INSERTION=AGCTAGGTGGATTTTCTCTTC;MAPQ=60;MATEID=629585:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_12_56595001_56620001_2C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:28:14:7.8:85.8,7.8,0:28:0:-85.82:85.82\n15\t40561981\t726817:2\tT\t[7:26201745[T\t24\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;MAPQ=60;MATEID=726817:1;MATENM=0;NM=0;NUMPARTS=3;SCTG=c_15_40547501_40572501_61C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:19:21.2:24.5,0,21.2:8:2:-24.37:24.37\n15\t40561991\t384129:2\tT\tT]7:26213338]\t30\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;INSERTION=ATATTTTTTTTTTAAAGAAATATAT;MAPQ=60;MATEID=384129:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_7_26190501_26215501_0C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:44:30.5:30.5,0,80:11:5:-30.55:31.78\n15\t43844862\t727594:1\tA\tA[15:43846655[\t46\tPASS\tEVDNC=ASSMB;HOMSEQ=GGA;MAPQ=60;MATEID=727594:2;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_15_43830501_43855501_14C;SPAN=1793;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:14:15:4.2:46.2,4.2,0:14:0:-46.19:46.19\n15\t43846655\t727594:2\tG\t]15:43844862]G\t46\tPASS\tEVDNC=ASSMB;HOMSEQ=GGA;MAPQ=60;MATEID=727594:1;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_15_43830501_43855501_14C;SPAN=1793;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:14:15:4.2:46.2,4.2,0:14:0:-46.19:46.19\n15\t44932069\t727843:1\tC\tC[15:44943043[\t56\tPASS\tDISC_MAPQ=50;EVDNC=ASDIS;MAPQ=60;MATEID=727843:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_15_44933001_44958001_10C;SPAN=10974;SUBN=1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:19:6:5.1:56.1,5.1,0:15:11:-56.11:56.11\n15\t44943043\t727843:2\tG\t]15:44932069]G\t56\tPASS\tDISC_MAPQ=5;EVDNC=ASDIS;MAPQ=18;MATEID=727843:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_15_44933001_44958001_10C;SPAN=10974;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:19:6:5.1:56.1,5.1,0:15:11:-56.11:56.11\n15\t45775782\t728113:1\tT\tT[15:45776117[\t56\tPASS\tEVDNC=ASSMB;HOMSEQ=CAGTACTCAGATTTCT;MAPQ=60;MATEID=728113:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_15_45766001_45791001_17C;SPAN=335;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:22:59:56:56,0,92.3:22:0:-56.04:56.53\n15\t45776117\t728113:2\tC\t]15:45775782]C\t56\tPASS\tEVDNC=ASSMB;HOMSEQ=CAGTACTCAGATTTCT;MAPQ=60;MATEID=728113:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_15_45766001_45791001_17C;SPAN=335;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:22:59:56:56,0,92.3:22:0:-56.04:56.53\n15\t46568509\t728314:1\tC\tC[15:46568971[\t31\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=728314:2;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_15_46550001_46575001_131C;SPAN=462;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:30:31.1:31.1,0,44.3:12:0:-31.18:31.31\n15\t46568971\t728314:2\tG\t]15:46568509]G\t31\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=728314:1;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_15_46550001_46575001_131C;SPAN=462;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:30:31.1:31.1,0,44.3:12:0:-31.18:31.31\n15\t48258079\t728721:1\tC\tC[15:48258385[\t66\tPASS\tEVDNC=ASSMB;HOMSEQ=AAGAGTGACCTTTAC;MAPQ=60;MATEID=728721:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_15_48240501_48265501_24C;SPAN=306;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:22:16:6:66,6,0:22:0:-66.02:66.02\n15\t48258385\t728721:2\tA\t]15:48258079]A\t66\tPASS\tEVDNC=ASSMB;HOMSEQ=AAGAGTGACCTTTAC;MAPQ=60;MATEID=728721:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_15_48240501_48265501_24C;SPAN=306;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:22:16:6:66,6,0:22:0:-66.02:66.02\n15\t51039721\t729920:1\tA\t]15:51222553]A\t39\tPASS\tDISC_MAPQ=255;EVDNC=ASDIS;HOMSEQ=AGCC;MAPQ=60;MATEID=729920:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_15_51205001_51230001_0C;SPAN=182832;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:16:48:39.5:39.5,0,79.1:13:10:-39.32:40.13\n15\t51060779\t729897:1\tT\t]15:51135960]T\t14\tPASS\tEVDNC=ASSMB;HOMSEQ=T;MAPQ=60;MATEID=729897:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_15_51131501_51156501_26C;SPAN=75181;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:53:14.9:14.9,0,117.2:9:0:-14.81:19.52\n15\t51135960\t729897:2\tT\tT[15:51060779[\t14\tPASS\tEVDNC=ASSMB;HOMSEQ=T;MAPQ=60;MATEID=729897:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_15_51131501_51156501_26C;SPAN=75181;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:53:14.9:14.9,0,117.2:9:0:-14.81:19.52\n15\t51222553\t729920:2\tC\tC[15:51039721[\t39\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AGCC;MAPQ=60;MATEID=729920:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_15_51205001_51230001_0C;SPAN=182832;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:16:48:39.5:39.5,0,79.1:13:10:-39.32:40.13\n15\t53117362\t730799:2\tT\tT]10:3040693]\t42\tPASS\tDISC_MAPQ=49;EVDNC=DSCRD;IMPRECISE;MAPQ=49;MATEID=730799:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=10:3040693(+)-15:53117362(+)__15_53116001_53141001D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:14:2:3.9:42.9,3.9,0:0:14:-42.91:42.91\n15\t54266895\t731383:1\tA\tA]15:54267497]\t32\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=731383:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=15:54266895(+)-15:54267497(+)__15_54243001_54268001D;SPAN=602;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:15:59:32.9:32.9,0,115.4:0:15:-32.93:35.51\n15\t54267497\t731383:2\tC\tC]15:54266895]\t32\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=731383:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=15:54266895(+)-15:54267497(+)__15_54243001_54268001D;SPAN=602;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:15:59:32.9:32.9,0,115.4:0:15:-32.93:35.51\n15\t54926147\t731620:1\tC\tC[15:54932265[\t59\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=731620:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=15:54926147(+)-15:54932265(-)__15_54904501_54929501D;SPAN=6118;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:20:5:5.4:59.4,5.4,0:0:20:-59.41:59.41\n15\t54932265\t731620:2\tC\t]15:54926147]C\t59\tPASS\tDISC_MAPQ=51;EVDNC=DSCRD;IMPRECISE;MAPQ=51;MATEID=731620:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=15:54926147(+)-15:54932265(-)__15_54904501_54929501D;SPAN=6118;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:20:5:5.4:59.4,5.4,0:0:20:-59.41:59.41\n15\t55137708\t731713:1\tT\tT[15:55138016[\t99\tPASS\tDISC_MAPQ=58;EVDNC=ASDIS;HOMSEQ=AAGAACTTGCTTTA;MAPQ=60;MATEID=731713:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_15_55125001_55150001_39C;SPAN=308;SUBN=1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:76:17:21:231,21,0:58:23:-231.1:231.1\n15\t55138016\t731713:2\tT\t]15:55137708]T\t99\tPASS\tDISC_MAPQ=50;EVDNC=ASDIS;HOMSEQ=AAGAACTTGCTTTA;MAPQ=60;MATEID=731713:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_15_55125001_55150001_39C;SPAN=308;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:76:17:21:231,21,0:58:23:-231.1:231.1\n15\t55307268\t731907:1\tT\t]15:55519627]T\t14\tPASS\tEVDNC=ASSMB;HOMSEQ=TCT;MAPQ=60;MATEID=731907:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_15_55517001_55542001_38C;SPAN=212359;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:7:30:14.6:14.6,0,60.8:7:0:-14.67:16.27\n15\t55363401\t731803:1\tA\tA[15:55364830[\t99\tPASS\tDISC_MAPQ=58;EVDNC=DSCRD;IMPRECISE;MAPQ=58;MATEID=731803:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=15:55363401(+)-15:55364830(-)__15_55345501_55370501D;SPAN=1429;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:45:17:12.6:138.6,12.6,0:0:45:-138.6:138.6\n15\t55364830\t731803:2\tA\t]15:55363401]A\t99\tPASS\tDISC_MAPQ=57;EVDNC=DSCRD;IMPRECISE;MAPQ=57;MATEID=731803:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=15:55363401(+)-15:55364830(-)__15_55345501_55370501D;SPAN=1429;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:45:17:12.6:138.6,12.6,0:0:45:-138.6:138.6\n15\t55519627\t731907:2\tT\tT[15:55307268[\t14\tPASS\tEVDNC=ASSMB;HOMSEQ=TCT;MAPQ=60;MATEID=731907:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_15_55517001_55542001_38C;SPAN=212359;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:7:30:14.6:14.6,0,60.8:7:0:-14.67:16.27\n15\t55959268\t732153:2\tT\t]6:9347213]T\t10\tPASS\tEVDNC=ASSMB;HOMSEQ=TTAG;MAPQ=60;MATEID=732153:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_15_55958001_55983001_95C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:7:44:10.7:10.7,0,99.8:7:0:-10.74:14.97\n15\t56758841\t732595:1\tT\tT[15:57242173[\t19\tPASS\tEVDNC=ASSMB;HOMSEQ=GT;MAPQ=60;MATEID=732595:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_15_57232001_57257001_7C;SPAN=483332;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:24:19.7:19.7,0,39.5:8:0:-19.66:20.07\n15\t56767901\t763324:1\tA\tA[16:35481713[\t29\tPASS\tEVDNC=ASSMB;HOMSEQ=A;MAPQ=60;MATEID=763324:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_16_35476001_35501001_13C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:13:2.9:29.3,0,2.9:10:0:-30.55:30.55\n15\t57242173\t732595:2\tG\t]15:56758841]G\t19\tPASS\tEVDNC=ASSMB;HOMSEQ=GT;MAPQ=60;MATEID=732595:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_15_57232001_57257001_7C;SPAN=483332;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:24:19.7:19.7,0,39.5:8:0:-19.66:20.07\n15\t58484217\t732918:1\tT\t]15:58485484]T\t24\tPASS\tEVDNC=ASSMB;HOMSEQ=TCA;MAPQ=60;MATEID=732918:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_15_58481501_58506501_52C;SPAN=1267;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:30:24.5:24.5,0,50.9:10:0:-24.58:25.08\n15\t58485484\t732918:2\tA\tA[15:58484217[\t24\tPASS\tEVDNC=ASSMB;HOMSEQ=TCA;MAPQ=60;MATEID=732918:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_15_58481501_58506501_52C;SPAN=1267;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:30:24.5:24.5,0,50.9:10:0:-24.58:25.08\n15\t62413896\t734250:1\tT\tT[15:62415594[\t33\tPASS\tEVDNC=ASSMB;HOMSEQ=ATT;MAPQ=60;MATEID=734250:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_15_62401501_62426501_7C;SPAN=1698;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:21:17.3:33.8,0,17.3:12:0:-33.92:33.92\n15\t62415594\t734250:2\tA\t]15:62413896]A\t33\tPASS\tEVDNC=ASSMB;HOMSEQ=ATT;MAPQ=60;MATEID=734250:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_15_62401501_62426501_7C;SPAN=1698;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:21:17.3:33.8,0,17.3:12:0:-33.92:33.92\n15\t62731836\t734367:2\tG\t[8:43588080[G\t49\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=CC;MAPQ=60;MATEID=734367:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_15_62720001_62745001_57C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:16:19:1.8:49.5,1.8,0:11:8:-50.34:50.34\n15\t63304215\t734738:1\tC\t]15:63530798]C\t15\tPASS\tEVDNC=ASSMB;HOMSEQ=CA;MAPQ=60;MATEID=734738:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_15_63528501_63553501_77C;SPAN=226583;SUBN=1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:7:27:15.5:15.5,0,51.8:7:0:-15.52:16.64\n15\t63530798\t734738:2\tA\tA[15:63304215[\t15\tPASS\tEVDNC=ASSMB;HOMSEQ=CA;MAPQ=60;MATEID=734738:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_15_63528501_63553501_77C;SPAN=226583;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:7:27:15.5:15.5,0,51.8:7:0:-15.52:16.64\n15\t66585336\t735943:1\tC\tC[15:66586077[\t85\tPASS\tEVDNC=ASSMB;HOMSEQ=TAGCTGGGATTACAGGCATGTGCCACC;MAPQ=60;MATEID=735943:2;MATENM=6;NM=1;NUMPARTS=2;SCTG=c_15_66566501_66591501_5C;SPAN=741;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:28:15:7.8:85.8,7.8,0:28:0:-85.82:85.82\n15\t66586077\t735943:2\tT\t]15:66585336]T\t85\tPASS\tEVDNC=ASSMB;HOMSEQ=TAGCTGGGATTACAGGCATGTGCCACC;MAPQ=60;MATEID=735943:1;MATENM=1;NM=6;NUMPARTS=2;SCTG=c_15_66566501_66591501_5C;SPAN=741;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:28:15:7.8:85.8,7.8,0:28:0:-85.82:85.82\n15\t66791433\t736010:1\tA\tA[15:66791732[\t29\tPASS\tEVDNC=ASSMB;INSERTION=TCCA;MAPQ=60;MATEID=736010:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_15_66787001_66812001_57C;SPAN=299;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:37:29.3:29.3,0,62.3:12:0:-29.21:29.92\n15\t66791732\t736010:2\tT\t]15:66791433]T\t29\tPASS\tEVDNC=ASSMB;INSERTION=TCCA;MAPQ=60;MATEID=736010:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_15_66787001_66812001_57C;SPAN=299;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:37:29.3:29.3,0,62.3:12:0:-29.21:29.92\n15\t67112365\t736108:1\tT\tT[15:67113267[\t21\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TTTTTAGTAGAGATGAGGTTTCACCGTGTT;MAPQ=60;MATEID=736108:2;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_15_67105501_67130501_22C;SPAN=902;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:17:18.5:21.8,0,18.5:4:5:-21.63:21.63\n15\t67113267\t736108:2\tT\t]15:67112365]T\t21\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TTTTTAGTAGAGATGAGGTTTCACCGTGTT;MAPQ=60;MATEID=736108:1;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_15_67105501_67130501_22C;SPAN=902;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:17:18.5:21.8,0,18.5:4:5:-21.63:21.63\n15\t68133682\t736498:1\tA\tA[15:68136590[\t99\tPASS\tEVDNC=ASSMB;HOMSEQ=CTGAAATTTAGATTTTTA;MAPQ=60;MATEID=736498:2;MATENM=1;NM=3;NUMPARTS=2;SCTG=c_15_68134501_68159501_0C;SPAN=2908;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:46:13:12.6:138.6,12.6,0:46:0:-138.6:138.6\n15\t68136590\t736498:2\tC\t]15:68133682]C\t99\tPASS\tEVDNC=ASSMB;HOMSEQ=CTGAAATTTAGATTTTTA;MAPQ=60;MATEID=736498:1;MATENM=3;NM=1;NUMPARTS=2;SCTG=c_15_68134501_68159501_0C;SPAN=2908;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:46:13:12.6:138.6,12.6,0:46:0:-138.6:138.6\n15\t70547227\t737285:2\tG\t]6:122850286]G\t99\tPASS\tDISC_MAPQ=59;EVDNC=ASDIS;INSERTION=C;MAPQ=60;MATEID=737285:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_15_70535501_70560501_58C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:50:22:13.8:151.8,13.8,0:38:23:-151.8:151.8\n15\t70729514\t737352:1\tA\tA[15:70735170[\t59\tPASS\tEVDNC=ASSMB;HOMSEQ=AAAGATGGGAACAA;MAPQ=60;MATEID=737352:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_15_70731501_70756501_0C;SPAN=5656;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:20:9:5.4:59.4,5.4,0:20:0:-59.41:59.41\n15\t70735170\t737352:2\tA\t]15:70729514]A\t59\tPASS\tEVDNC=ASSMB;HOMSEQ=AAAGATGGGAACAA;MAPQ=60;MATEID=737352:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_15_70731501_70756501_0C;SPAN=5656;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:20:9:5.4:59.4,5.4,0:20:0:-59.41:59.41\n15\t71199706\t737458:1\tG\t]15:71199923]G\t14\tPASS\tEVDNC=ASSMB;HOMSEQ=GGGTGTGTG;MAPQ=60;MATEID=737458:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_15_71197001_71222001_79C;SPAN=217;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:43:14.3:14.3,0,93.5:8:0:-14.32:17.71\n15\t71199923\t737458:2\tG\tG[15:71199706[\t14\tPASS\tEVDNC=ASSMB;HOMSEQ=GGGTGTGTG;MAPQ=60;MATEID=737458:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_15_71197001_71222001_79C;SPAN=217;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:43:14.3:14.3,0,93.5:8:0:-14.32:17.71\n15\t71364652\t737504:1\tA\tA[15:71371197[\t20\tPASS\tEVDNC=ASSMB;HOMSEQ=A;MAPQ=60;MATEID=737504:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_15_71368501_71393501_2C;SPAN=6545;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:20:20.9:20.9,0,27.5:8:0:-20.79:20.87\n15\t71371197\t737504:2\tA\t]15:71364652]A\t20\tPASS\tEVDNC=ASSMB;HOMSEQ=A;MAPQ=60;MATEID=737504:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_15_71368501_71393501_2C;SPAN=6545;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:20:20.9:20.9,0,27.5:8:0:-20.79:20.87\n15\t71416270\t737524:1\tA\tA[15:71421352[\t35\tPASS\tEVDNC=ASSMB;INSERTION=ACC;MAPQ=60;MATEID=737524:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_15_71417501_71442501_20C;SPAN=5082;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:15:2.3:35.3,0,2.3:12:0:-37.11:37.11\n15\t71421352\t737524:2\tC\t]15:71416270]C\t35\tPASS\tEVDNC=ASSMB;INSERTION=ACC;MAPQ=60;MATEID=737524:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_15_71417501_71442501_20C;SPAN=5082;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:15:2.3:35.3,0,2.3:12:0:-37.11:37.11\n15\t71589230\t737607:1\tT\tT[15:71590628[\t69\tPASS\tEVDNC=ASSMB;INSERTION=T;MAPQ=60;MATEID=737607:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_15_71589001_71614001_84C;SPAN=1398;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:23:20:6.3:69.3,6.3,0:23:0:-69.32:69.32\n15\t71590628\t737607:2\tA\t]15:71589230]A\t69\tPASS\tEVDNC=ASSMB;INSERTION=T;MAPQ=60;MATEID=737607:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_15_71589001_71614001_84C;SPAN=1398;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:23:20:6.3:69.3,6.3,0:23:0:-69.32:69.32\n15\t71810648\t737769:1\tG\t]15:72011907]G\t22\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=737769:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_15_72005501_72030501_35C;SPAN=201259;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:27:22.1:22.1,0,45.2:9:0:-22.12:22.58\n15\t72011907\t737769:2\tA\tA[15:71810648[\t22\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=737769:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_15_72005501_72030501_35C;SPAN=201259;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:27:22.1:22.1,0,45.2:9:0:-22.12:22.58\n15\t72093702\t737798:1\tC\tC[15:72095807[\t95\tPASS\tDISC_MAPQ=59;EVDNC=DSCRD;IMPRECISE;MAPQ=59;MATEID=737798:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=15:72093702(+)-15:72095807(-)__15_72079001_72104001D;SPAN=2105;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:32:5:8.7:95.7,8.7,0:0:32:-95.72:95.72\n15\t72095807\t737798:2\tT\t]15:72093702]T\t95\tPASS\tDISC_MAPQ=54;EVDNC=DSCRD;IMPRECISE;MAPQ=54;MATEID=737798:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=15:72093702(+)-15:72095807(-)__15_72079001_72104001D;SPAN=2105;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:32:5:8.7:95.7,8.7,0:0:32:-95.72:95.72\n15\t73871864\t738311:1\tA\tA[15:73872047[\t25\tPASS\tEVDNC=ASSMB;INSERTION=TT;MAPQ=60;MATEID=738311:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_15_73867501_73892501_12C;SPAN=183;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:50:25.7:25.7,0,98.3:12:0:-25.56:28.06\n15\t73872047\t738311:2\tA\t]15:73871864]A\t25\tPASS\tEVDNC=ASSMB;INSERTION=TT;MAPQ=60;MATEID=738311:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_15_73867501_73892501_12C;SPAN=183;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:50:25.7:25.7,0,98.3:12:0:-25.56:28.06\n15\t75332393\t739347:1\tT\tT]15:77948129]\t79\tPASS\tDISC_MAPQ=44;EVDNC=DSCRD;IMPRECISE;MAPQ=44;MATEID=739347:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=15:75332393(+)-15:77948129(+)__15_77934501_77959501D;SPAN=2615736;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:26:5:7.2:79.2,7.2,0:0:26:-79.22:79.22\n15\t76592256\t739029:1\tT\tT[15:76604598[\t99\tPASS\tEVDNC=ASSMB;HOMSEQ=T;MAPQ=60;MATEID=739029:2;MATENM=3;NM=5;NUMPARTS=2;SCTG=c_15_76587001_76612001_9C;SPAN=12342;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:39:17:10.8:118.8,10.8,0:39:0:-118.8:118.8\n15\t76604598\t739029:2\tT\t]15:76592256]T\t99\tPASS\tEVDNC=ASSMB;HOMSEQ=T;MAPQ=60;MATEID=739029:1;MATENM=5;NM=3;NUMPARTS=2;SCTG=c_15_76587001_76612001_9C;SPAN=12342;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:39:17:10.8:118.8,10.8,0:39:0:-118.8:118.8\n15\t76800145\t739080:2\tA\t]1:35259113]A\t92\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=A;MAPQ=60;MATEID=739080:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_15_76783001_76808001_25C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:31:21:8.4:92.4,8.4,0:29:9:-92.42:92.42\n15\t77716143\t739264:1\tT\tT[15:77720242[\t24\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=739264:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_15_77714001_77739001_61C;SPAN=4099;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:32:24.2:24.2,0,53.9:10:0:-24.02:24.74\n15\t77720242\t739264:2\tT\t]15:77716143]T\t24\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=739264:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_15_77714001_77739001_61C;SPAN=4099;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:32:24.2:24.2,0,53.9:10:0:-24.02:24.74\n15\t77948129\t739347:2\tT\tT]15:75332393]\t79\tPASS\tDISC_MAPQ=58;EVDNC=DSCRD;IMPRECISE;MAPQ=58;MATEID=739347:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=15:75332393(+)-15:77948129(+)__15_77934501_77959501D;SPAN=2615736;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:26:5:7.2:79.2,7.2,0:0:26:-79.22:79.22\n15\t77948962\t739680:1\tC\t[15:78747005[C\t42\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=739680:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=15:77948962(-)-15:78747005(-)__15_78743001_78768001D;SPAN=798043;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:14:1:3.9:42.9,3.9,0:0:14:-42.91:42.91\n15\t78058385\t739396:1\tC\tC[15:78058657[\t23\tPASS\tEVDNC=ASSMB;HOMSEQ=C;MAPQ=60;MATEID=739396:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_15_78057001_78082001_13C;SPAN=272;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:34:23.6:23.6,0,59.9:10:0:-23.45:24.42\n15\t78058657\t739396:2\tC\t]15:78058385]C\t23\tPASS\tEVDNC=ASSMB;HOMSEQ=C;MAPQ=60;MATEID=739396:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_15_78057001_78082001_13C;SPAN=272;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:34:23.6:23.6,0,59.9:10:0:-23.45:24.42\n15\t78747005\t739680:2\tC\t[15:77948962[C\t42\tPASS\tDISC_MAPQ=31;EVDNC=DSCRD;IMPRECISE;MAPQ=31;MATEID=739680:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=15:77948962(-)-15:78747005(-)__15_78743001_78768001D;SPAN=798043;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:14:1:3.9:42.9,3.9,0:0:14:-42.91:42.91\n15\t79973158\t740168:1\tC\tC]15:79973750]\t11\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=740168:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=15:79973158(+)-15:79973750(+)__15_79968001_79993001D;SPAN=592;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:52:11.9:11.9,0,117.5:0:8:-11.79:16.98\n15\t79973404\t740170:1\tT\tT[15:79973712[\t31\tPASS\tDISC_MAPQ=255;EVDNC=TSI_G;HOMSEQ=AA;INSERTION=TTGAATCTACCACAGCTTTGCACTGAGGCCACACATCCTACAGGCTGTTCCCAGCC;MAPQ=60;MATEID=740170:2;MATENM=0;NM=0;NUMPARTS=3;SCTG=c_15_79968001_79993001_3C;SPAN=308;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:42:31.1:31.1,0,74:13:0:-31.11:32.1\n15\t79973712\t740170:2\tA\t]15:79973404]A\t31\tPASS\tDISC_MAPQ=255;EVDNC=TSI_G;HOMSEQ=AA;INSERTION=TTGAATCTACCACAGCTTTGCACTGAGGCCACACATCCTACAGGCTGTTCCCAGCC;MAPQ=60;MATEID=740170:1;MATENM=0;NM=0;NUMPARTS=3;SCTG=c_15_79968001_79993001_3C;SPAN=308;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:42:31.1:31.1,0,74:13:0:-31.11:32.1\n15\t79973750\t740168:2\tC\tC]15:79973158]\t11\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=740168:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=15:79973158(+)-15:79973750(+)__15_79968001_79993001D;SPAN=592;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:52:11.9:11.9,0,117.5:0:8:-11.79:16.98\n15\t82882879\t741083:1\tT\tT[15:82888919[\t26\tPASS\tEVDNC=ASSMB;HOMSEQ=CACCAGCCACT;MAPQ=60;MATEID=741083:2;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_15_82883501_82908501_8C;SPAN=6040;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:23:26.6:26.6,0,29.9:10:0:-26.55:26.57\n15\t82888919\t741083:2\tC\t]15:82882879]C\t26\tPASS\tEVDNC=ASSMB;HOMSEQ=CACCAGCCACT;MAPQ=60;MATEID=741083:1;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_15_82883501_82908501_8C;SPAN=6040;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:23:26.6:26.6,0,29.9:10:0:-26.55:26.57\n15\t83105131\t741171:1\tG\tG[15:83105451[\t12\tPASS\tEVDNC=ASSMB;HOMSEQ=AGAGAAACTG;MAPQ=60;MATEID=741171:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_15_83104001_83129001_4C;SPAN=320;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:7:38:12.5:12.5,0,81.8:7:0:-12.43:15.46\n15\t83105451\t741171:2\tA\t]15:83105131]A\t12\tPASS\tEVDNC=ASSMB;HOMSEQ=AGAGAAACTG;MAPQ=60;MATEID=741171:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_15_83104001_83129001_4C;SPAN=320;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:7:38:12.5:12.5,0,81.8:7:0:-12.43:15.46\n15\t83872801\t741369:1\tT\tT[15:83875096[\t92\tPASS\tDISC_MAPQ=59;EVDNC=DSCRD;IMPRECISE;MAPQ=59;MATEID=741369:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=15:83872801(+)-15:83875096(-)__15_83863501_83888501D;SPAN=2295;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:31:19:8.4:92.4,8.4,0:0:31:-92.42:92.42\n15\t83875096\t741369:2\tT\t]15:83872801]T\t92\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=741369:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=15:83872801(+)-15:83875096(-)__15_83863501_83888501D;SPAN=2295;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:31:19:8.4:92.4,8.4,0:0:31:-92.42:92.42\n15\t84635421\t741774:1\tA\t]15:84984456]A\t27\tPASS\tEVDNC=ASSMB;HOMSEQ=AGT;MAPQ=60;MATEID=741774:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_15_84966001_84991001_39C;SPAN=349035;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:30:27.8:27.8,0,47.6:11:0:-27.88:28.16\n15\t84984456\t741774:2\tT\tT[15:84635421[\t27\tPASS\tEVDNC=ASSMB;HOMSEQ=AGT;MAPQ=60;MATEID=741774:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_15_84966001_84991001_39C;SPAN=349035;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:30:27.8:27.8,0,47.6:11:0:-27.88:28.16\n15\t85009452\t741814:1\tT\t]15:85130254]T\t28\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=741814:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=15:85009452(-)-15:85130254(+)__15_85113001_85138001D;SPAN=120802;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:27:28.7:28.7,0,38.6:0:11:-28.72:28.81\n15\t85130254\t741814:2\tA\tA[15:85009452[\t28\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=741814:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=15:85009452(-)-15:85130254(+)__15_85113001_85138001D;SPAN=120802;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:27:28.7:28.7,0,38.6:0:11:-28.72:28.81\n15\t86013468\t742255:2\tT\tT[6:163482678[\t23\tPASS\tDISC_MAPQ=52;EVDNC=DSCRD;IMPRECISE;MAPQ=52;MATEID=742255:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:163482678(-)-15:86013468(+)__15_85995001_86020001D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:10:0.5:23.6,0,0.5:0:8:-24.74:24.74\n15\t86850836\t742646:1\tA\t]15:87105091]A\t30\tPASS\tEVDNC=ASSMB;HOMSEQ=A;MAPQ=60;MATEID=742646:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_15_87097501_87122501_6C;SPAN=254255;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:21:20.6:30.5,0,20.6:11:0:-30.47:30.47\n15\t87105091\t742646:2\tA\tA[15:86850836[\t30\tPASS\tEVDNC=ASSMB;HOMSEQ=A;MAPQ=60;MATEID=742646:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_15_87097501_87122501_6C;SPAN=254255;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:21:20.6:30.5,0,20.6:11:0:-30.47:30.47\n15\t99031325\t747000:1\tC\tC[15:99032380[\t99\tPASS\tDISC_MAPQ=53;EVDNC=ASDIS;HOMSEQ=CACTGCAACCTCCGCCTCCCAGGTTCAAGTGATTCTCCTGCCTCAGCCTCCCGAGCAGCTGGGATTACAGGC;MAPQ=60;MATEID=747000:2;MATENM=3;NM=6;NUMPARTS=2;SCTG=c_15_99029001_99054001_21C;SPAN=1055;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:54:7:15:165,15,0:23:38:-165:165\n15\t99032380\t747000:2\tC\t]15:99031325]C\t99\tPASS\tDISC_MAPQ=57;EVDNC=ASDIS;HOMSEQ=CACTGCAACCTCCGCCTCCCAGGTTCAAGTGATTCTCCTGCCTCAGCCTCCCGAGCAGCTGGGATTACAGGC;MAPQ=60;MATEID=747000:1;MATENM=6;NM=3;NUMPARTS=2;SCTG=c_15_99029001_99054001_21C;SPAN=1055;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:54:7:15:165,15,0:23:38:-165:165\n15\t100146718\t747303:1\tG\t]15:100152928]G\t22\tPASS\tDISC_MAPQ=23;EVDNC=DSCRD;IMPRECISE;MAPQ=23;MATEID=747303:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=15:100146718(-)-15:100152928(+)__15_100131501_100156501D;SPAN=6210;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:39:22.1:22.1,0,74.9:0:10:-22.05:23.72\n15\t100146883\t747304:1\tA\tA[15:100153135[\t50\tPASS\tDISC_MAPQ=30;EVDNC=DSCRD;IMPRECISE;MAPQ=30;MATEID=747304:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=15:100146883(+)-15:100153135(-)__15_100131501_100156501D;SPAN=6252;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:18:33:30.5:50.3,0,30.5:0:18:-50.33:50.33\n15\t100152928\t747303:2\tG\tG[15:100146718[\t22\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=747303:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=15:100146718(-)-15:100152928(+)__15_100131501_100156501D;SPAN=6210;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:39:22.1:22.1,0,74.9:0:10:-22.05:23.72\n15\t100153135\t747304:2\tA\t]15:100146883]A\t50\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=747304:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=15:100146883(+)-15:100153135(-)__15_100131501_100156501D;SPAN=6252;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:18:33:30.5:50.3,0,30.5:0:18:-50.33:50.33\n15\t100442708\t747741:1\tC\t]15:101075010]C\t29\tPASS\tDISC_MAPQ=31;EVDNC=DSCRD;IMPRECISE;MAPQ=31;MATEID=747741:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=15:100442708(-)-15:101075010(+)__15_101062501_101087501D;SPAN=632302;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:10:12:0:29.7,0,0:0:10:-31.35:31.35\n15\t101075010\t747741:2\tG\tG[15:100442708[\t29\tPASS\tDISC_MAPQ=18;EVDNC=DSCRD;IMPRECISE;MAPQ=18;MATEID=747741:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=15:100442708(-)-15:101075010(+)__15_101062501_101087501D;SPAN=632302;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:10:12:0:29.7,0,0:0:10:-31.35:31.35\n16\t458618\t748395:1\tT\t]16:459067]T\t0\tPASS\tEVDNC=ASSMB;HOMSEQ=TCATC;MAPQ=60;MATEID=748395:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_16_441001_466001_96C;SPAN=449;SUBN=2;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/0:5:63:0.9:0,0.9,158.4:5:0:1.204:9.086\n16\t458641\t748396:1\tG\t[16:563288[G\t33\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=GGC;MAPQ=60;MATEID=748396:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_16_441001_466001_49C;SPAN=104647;SUBN=1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:33:33.8:33.8,0,47:8:7:-33.64:33.8\n16\t459067\t748395:2\tC\tC[16:458618[\t0\tPASS\tEVDNC=ASSMB;HOMSEQ=TCATC;MAPQ=60;MATEID=748395:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_16_441001_466001_96C;SPAN=449;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/0:5:63:0.9:0,0.9,158.4:5:0:1.204:9.086\n16\t480785\t748407:1\tA\tA[16:481069[\t20\tPASS\tEVDNC=ASSMB;HOMSEQ=AAAGTGCTGGGATTACAGGCGTGAGCCA;MAPQ=60;MATEID=748407:2;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_16_465501_490501_143C;SPAN=284;SUBN=2;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:35:20:20,0,66.2:9:0:-19.87:21.36\n16\t481069\t748407:2\tA\t]16:480785]A\t20\tPASS\tEVDNC=ASSMB;HOMSEQ=AAAGTGCTGGGATTACAGGCGTGAGCCA;MAPQ=60;MATEID=748407:1;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_16_465501_490501_143C;SPAN=284;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:35:20:20,0,66.2:9:0:-19.87:21.36\n16\t563288\t748396:2\tG\t[16:458641[G\t33\tPASS\tDISC_MAPQ=58;EVDNC=ASDIS;HOMSEQ=GGC;MAPQ=60;MATEID=748396:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_16_441001_466001_49C;SPAN=104647;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:33:33.8:33.8,0,47:8:7:-33.64:33.8\n16\t909933\t748564:2\tG\tG[9:119887340[\t32\tPASS\tEVDNC=ASSMB;HOMSEQ=TG;MAPQ=60;MATEID=748564:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_16_906501_931501_32C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:25:29.3:32.6,0,29.3:12:0:-32.59:32.59\n16\t1372911\t748770:1\tC\tC[16:1374091[\t46\tPASS\tDISC_MAPQ=57;EVDNC=DSCRD;IMPRECISE;MAPQ=57;MATEID=748770:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=16:1372911(+)-16:1374091(-)__16_1372001_1397001D;SPAN=1180;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:16:15:4.2:46.2,4.2,0:0:16:-46.21:46.21\n16\t1374091\t748770:2\tA\t]16:1372911]A\t46\tPASS\tDISC_MAPQ=52;EVDNC=DSCRD;IMPRECISE;MAPQ=52;MATEID=748770:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=16:1372911(+)-16:1374091(-)__16_1372001_1397001D;SPAN=1180;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:16:15:4.2:46.2,4.2,0:0:16:-46.21:46.21\n16\t1795954\t748893:1\tA\tA[16:1796104[\t5\tPASS\tEVDNC=ASSMB;HOMSEQ=CTGCCTCAGCCTCCCAAGTAGCTGGGATTA;MAPQ=60;MATEID=748893:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_16_1788501_1813501_49C;SPAN=150;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:5:38:5.9:5.9,0,88.4:5:0:-5.824:10.24\n16\t1796104\t748893:2\tC\t]16:1795954]C\t5\tPASS\tEVDNC=ASSMB;HOMSEQ=CTGCCTCAGCCTCCCAAGTAGCTGGGATTA;MAPQ=60;MATEID=748893:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_16_1788501_1813501_49C;SPAN=150;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:5:38:5.9:5.9,0,88.4:5:0:-5.824:10.24\n16\t4306246\t749770:1\tT\t]16:4449304]T\t21\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TGGTC;MAPQ=60;MATEID=749770:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_16_4434501_4459501_108C;SPAN=143058;SUBN=2;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:19:21.2:21.2,0,24.5:5:5:-21.07:21.11\n16\t4449304\t749770:2\tC\tC[16:4306246[\t21\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TGGTC;MAPQ=10;MATEID=749770:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_16_4434501_4459501_108C;SPAN=143058;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:19:21.2:21.2,0,24.5:5:5:-21.07:21.11\n16\t4622158\t749870:1\tT\tT[16:4622413[\t69\tPASS\tDISC_MAPQ=55;EVDNC=ASDIS;HOMSEQ=CTCAGCTTCCCGAGTAGCTGGGATTACAGGCACATGCCACCACACCCAGCTAATTTTT;MAPQ=60;MATEID=749870:2;MATENM=3;NM=2;NUMPARTS=2;SCTG=c_16_4606001_4631001_94C;SPAN=255;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:23:11:6.3:69.3,6.3,0:12:12:-69.32:69.32\n16\t4622413\t749870:2\tC\t]16:4622158]C\t69\tPASS\tDISC_MAPQ=59;EVDNC=ASDIS;HOMSEQ=CTCAGCTTCCCGAGTAGCTGGGATTACAGGCACATGCCACCACACCCAGCTAATTTTT;MAPQ=60;MATEID=749870:1;MATENM=2;NM=3;NUMPARTS=2;SCTG=c_16_4606001_4631001_94C;SPAN=255;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:23:11:6.3:69.3,6.3,0:12:12:-69.32:69.32\n16\t6221570\t750485:1\tA\tA]17:53112039]\t26\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=750485:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=16:6221570(+)-17:53112039(+)__16_6198501_6223501D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:12:3.2:26.3,0,3.2:0:9:-27.29:27.29\n16\t6222194\t807773:1\tA\t[17:53111341[A\t55\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=T;MAPQ=60;MATEID=807773:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_17_53091501_53116501_47C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:19:26:9.2:55.4,0,9.2:14:8:-57.2:57.2\n16\t6331609\t750547:1\tT\t]16:6340893]T\t19\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;MAPQ=60;MATEID=750547:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_16_6321001_6346001_6C;SPAN=9284;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:37:19.4:19.4,0,72.2:7:8:-19.31:21.11\n16\t6340893\t750547:2\tC\tC[16:6331609[\t19\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;MAPQ=60;MATEID=750547:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_16_6321001_6346001_6C;SPAN=9284;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:37:19.4:19.4,0,72.2:7:8:-19.31:21.11\n16\t9394638\t752239:1\tT\t]16:9394746]T\t11\tPASS\tEVDNC=ASSMB;HOMSEQ=TCCCTCCCTTCCTCTCTCCCTCCCTTCCT;MAPQ=60;MATEID=752239:2;MATENM=2;NM=2;NUMPARTS=2;SCTG=c_16_9383501_9408501_108C;SPAN=108;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:4:6:1.7:11.6,0,1.7:4:0:-11.75:11.75\n16\t9394746\t752239:2\tT\tT[16:9394638[\t11\tPASS\tEVDNC=ASSMB;HOMSEQ=TCCCTCCCTTCCTCTCTCCCTCCCTTCCT;MAPQ=60;MATEID=752239:1;MATENM=2;NM=2;NUMPARTS=2;SCTG=c_16_9383501_9408501_108C;SPAN=108;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:4:6:1.7:11.6,0,1.7:4:0:-11.75:11.75\n16\t10676991\t752774:1\tC\t]16:10677742]C\t48\tPASS\tEVDNC=ASSMB;INSERTION=CCACC;MAPQ=60;MATEID=752774:2;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_16_10657501_10682501_92C;SPAN=751;SUBN=1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:19:52:48.2:48.2,0,81.2:19:0:-48.1:48.61\n16\t10677215\t752775:1\tA\tA[16:10677733[\t86\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=752775:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_16_10657501_10682501_163C;SPAN=518;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:31:55:50.6:86.9,0,50.6:31:0:-87.35:87.35\n16\t10677733\t752775:2\tG\t]16:10677215]G\t86\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=752775:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_16_10657501_10682501_163C;SPAN=518;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:31:55:50.6:86.9,0,50.6:31:0:-87.35:87.35\n16\t10677742\t752774:2\tA\tA[16:10676991[\t48\tPASS\tEVDNC=ASSMB;INSERTION=CCACC;MAPQ=60;MATEID=752774:1;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_16_10657501_10682501_92C;SPAN=751;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:19:52:48.2:48.2,0,81.2:19:0:-48.1:48.61\n16\t11589903\t753150:1\tT\tT[16:11591439[\t29\tPASS\tDISC_MAPQ=51;EVDNC=ASDIS;HOMSEQ=CCTCCCAAAGTGCTGGGATTACAGGT;MAPQ=60;MATEID=753150:2;MATENM=8;NM=0;NUMPARTS=2;SCTG=c_16_11588501_11613501_112C;SPAN=1536;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:37:29.3:29.3,0,62.3:7:7:-29.21:29.92\n16\t11591439\t753150:2\tC\t]16:11589903]C\t29\tPASS\tDISC_MAPQ=52;EVDNC=ASDIS;HOMSEQ=CCTCCCAAAGTGCTGGGATTACAGGT;MAPQ=60;MATEID=753150:1;MATENM=0;NM=8;NUMPARTS=2;SCTG=c_16_11588501_11613501_112C;SPAN=1536;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:37:29.3:29.3,0,62.3:7:7:-29.21:29.92\n16\t11908479\t753253:1\tG\tG[16:11908788[\t95\tPASS\tEVDNC=ASSMB;HOMSEQ=AAAAATACAAAAATTAG;MAPQ=60;MATEID=753253:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_16_11907001_11932001_46C;SPAN=309;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:29:32:8.7:95.7,8.7,0:29:0:-94:94\n16\t11908788\t753253:2\tA\t]16:11908479]A\t95\tPASS\tEVDNC=ASSMB;HOMSEQ=AAAAATACAAAAATTAG;MAPQ=60;MATEID=753253:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_16_11907001_11932001_46C;SPAN=309;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:29:32:8.7:95.7,8.7,0:29:0:-94:94\n16\t14359379\t754285:1\tT\tT[16:14359797[\t12\tPASS\tEVDNC=ASSMB;HOMSEQ=T;MAPQ=60;MATEID=754285:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_16_14357001_14382001_46C;SPAN=418;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:7:38:12.5:12.5,0,81.8:7:0:-12.43:15.46\n16\t14359797\t754285:2\tT\t]16:14359379]T\t12\tPASS\tEVDNC=ASSMB;HOMSEQ=T;MAPQ=60;MATEID=754285:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_16_14357001_14382001_46C;SPAN=418;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:7:38:12.5:12.5,0,81.8:7:0:-12.43:15.46\n16\t16840521\t755143:1\tT\tT[16:16846558[\t99\tPASS\tEVDNC=ASSMB;HOMSEQ=AAGCTTAATTCTTTT;MAPQ=60;MATEID=755143:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_16_16831501_16856501_85C;SPAN=6037;SUBN=2;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:35:28:9.6:105.6,9.6,0:35:0:-105.6:105.6\n16\t16846558\t755143:2\tA\t]16:16840521]A\t99\tPASS\tEVDNC=ASSMB;HOMSEQ=AAGCTTAATTCTTTT;MAPQ=60;MATEID=755143:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_16_16831501_16856501_85C;SPAN=6037;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:35:28:9.6:105.6,9.6,0:35:0:-105.6:105.6\n16\t18821324\t755721:1\tT\tT[16:18827054[\t72\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=755721:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=16:18821324(+)-16:18827054(-)__16_18816001_18841001D;SPAN=5730;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:24:9:6.6:72.6,6.6,0:0:24:-72.62:72.62\n16\t18827054\t755721:2\tG\t]16:18821324]G\t72\tPASS\tDISC_MAPQ=56;EVDNC=DSCRD;IMPRECISE;MAPQ=56;MATEID=755721:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=16:18821324(+)-16:18827054(-)__16_18816001_18841001D;SPAN=5730;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:24:9:6.6:72.6,6.6,0:0:24:-72.62:72.62\n16\t18866485\t755809:1\tG\t]16:18999859]G\t33\tPASS\tDISC_MAPQ=18;EVDNC=DSCRD;IMPRECISE;MAPQ=18;MATEID=755809:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=16:18866485(-)-16:18999859(+)__16_18987501_19012501D;SPAN=133374;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:11:11:3:33,3,0:0:11:-33.01:33.01\n16\t18999859\t755809:2\tG\tG[16:18866485[\t33\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=755809:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=16:18866485(-)-16:18999859(+)__16_18987501_19012501D;SPAN=133374;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:11:11:3:33,3,0:0:11:-33.01:33.01\n16\t20595326\t756368:1\tC\tC[16:20601487[\t26\tPASS\tDISC_MAPQ=41;EVDNC=DSCRD;IMPRECISE;MAPQ=41;MATEID=756368:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=16:20595326(+)-16:20601487(-)__16_20580001_20605001D;SPAN=6161;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:37:26:26,0,65.6:0:11:-25.91:26.93\n16\t20601487\t756368:2\tG\t]16:20595326]G\t26\tPASS\tDISC_MAPQ=47;EVDNC=DSCRD;IMPRECISE;MAPQ=47;MATEID=756368:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=16:20595326(+)-16:20601487(-)__16_20580001_20605001D;SPAN=6161;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:37:26:26,0,65.6:0:11:-25.91:26.93\n16\t20767235\t756419:1\tG\tG[16:20767540[\t89\tPASS\tEVDNC=ASSMB;HOMSEQ=AAAAAACAGGGACCGG;MAPQ=60;MATEID=756419:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_16_20751501_20776501_13C;SPAN=305;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:29:18:8.1:89.1,8.1,0:29:0:-89.12:89.12\n16\t20767540\t756419:2\tA\t]16:20767235]A\t89\tPASS\tEVDNC=ASSMB;HOMSEQ=AAAAAACAGGGACCGG;MAPQ=60;MATEID=756419:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_16_20751501_20776501_13C;SPAN=305;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:29:18:8.1:89.1,8.1,0:29:0:-89.12:89.12\n16\t20885123\t756455:1\tC\t]16:20923726]C\t26\tPASS\tDISC_MAPQ=52;EVDNC=ASDIS;INSERTION=AAT;MAPQ=24;MATEID=756455:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_16_20923001_20948001_19C;SPAN=38603;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:13:6.2:26,0,6.2:5:7:-26.69:26.69\n16\t20923726\t756455:2\tC\tC[16:20885123[\t26\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;INSERTION=AAT;MAPQ=60;MATEID=756455:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_16_20923001_20948001_19C;SPAN=38603;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:13:6.2:26,0,6.2:5:7:-26.69:26.69\n16\t23036574\t757051:1\tT\tT[16:23038210[\t99\tPASS\tDISC_MAPQ=58;EVDNC=DSCRD;IMPRECISE;MAPQ=58;MATEID=757051:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=16:23036574(+)-16:23038210(-)__16_23030001_23055001D;SPAN=1636;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:58:11:16.2:178.2,16.2,0:0:58:-178.2:178.2\n16\t23038210\t757051:2\tG\t]16:23036574]G\t99\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=757051:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=16:23036574(+)-16:23038210(-)__16_23030001_23055001D;SPAN=1636;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:58:11:16.2:178.2,16.2,0:0:58:-178.2:178.2\n16\t23454885\t757171:1\tC\t]16:23455660]C\t18\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=CCTGTAATCCCAGCTACTCAGGAGGCAGAGGCAGGAGAA;MAPQ=60;MATEID=757171:2;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_16_23446501_23471501_48C;SPAN=775;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:41:18.2:18.2,0,84.2:7:6:-18.18:20.65\n16\t23455660\t757171:2\tA\tA[16:23454885[\t18\tPASS\tDISC_MAPQ=59;EVDNC=ASDIS;HOMSEQ=CCTGTAATCCCAGCTACTCAGGAGGCAGAGGCAGGAGAA;MAPQ=60;MATEID=757171:1;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_16_23446501_23471501_48C;SPAN=775;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:41:18.2:18.2,0,84.2:7:6:-18.18:20.65\n16\t23517232\t757200:1\tT\tT[16:23517528[\t89\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=CCCAGCTAATTTTTTTCT;MAPQ=60;MATEID=757200:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_16_23495501_23520501_18C;SPAN=296;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:28:29:8.1:89.1,8.1,0:20:13:-89.12:89.12\n16\t23517528\t757200:2\tC\t]16:23517232]C\t89\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=CCCAGCTAATTTTTTTCT;MAPQ=60;MATEID=757200:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_16_23495501_23520501_18C;SPAN=296;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:28:29:8.1:89.1,8.1,0:20:13:-89.12:89.12\n16\t23801697\t757334:1\tC\tC[16:23801784[\t12\tPASS\tEVDNC=ASSMB;HOMSEQ=CCCTTCCCTTCCCTTCCCTTC;MAPQ=60;MATEID=757334:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_16_23789501_23814501_0C;SPAN=87;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:5:16:12.2:12.2,0,25.4:5:0:-12.01:12.37\n16\t23801784\t757334:2\tC\t]16:23801697]C\t12\tPASS\tEVDNC=ASSMB;HOMSEQ=CCCTTCCCTTCCCTTCCCTTC;MAPQ=60;MATEID=757334:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_16_23789501_23814501_0C;SPAN=87;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:5:16:12.2:12.2,0,25.4:5:0:-12.01:12.37\n16\t24412394\t813236:1\tA\t]17:68005944]A\t49\tPASS\tDISC_MAPQ=32;EVDNC=DSCRD;IMPRECISE;MAPQ=32;MATEID=813236:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=16:24412394(-)-17:68005944(+)__17_67987501_68012501D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:17:17:4.5:49.5,4.5,0:0:17:-49.51:49.51\n16\t25054926\t757985:1\tT\tT[16:25126102[\t25\tPASS\tDISC_MAPQ=58;EVDNC=DSCRD;IMPRECISE;MAPQ=58;MATEID=757985:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=16:25054926(+)-16:25126102(-)__16_25112501_25137501D;SPAN=71176;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:26:25.7:25.7,0,38.9:0:10:-25.7:25.87\n16\t25055244\t757986:1\tG\t]16:25126503]G\t50\tPASS\tDISC_MAPQ=52;EVDNC=DSCRD;IMPRECISE;MAPQ=52;MATEID=757986:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=16:25055244(-)-16:25126503(+)__16_25112501_25137501D;SPAN=71259;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:17:21:0.8:50.3,0,0.8:0:17:-52.77:52.77\n16\t25126102\t757985:2\tA\t]16:25054926]A\t25\tPASS\tDISC_MAPQ=49;EVDNC=DSCRD;IMPRECISE;MAPQ=49;MATEID=757985:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=16:25054926(+)-16:25126102(-)__16_25112501_25137501D;SPAN=71176;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:26:25.7:25.7,0,38.9:0:10:-25.7:25.87\n16\t25126503\t757986:2\tT\tT[16:25055244[\t50\tPASS\tDISC_MAPQ=45;EVDNC=DSCRD;IMPRECISE;MAPQ=45;MATEID=757986:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=16:25055244(-)-16:25126503(+)__16_25112501_25137501D;SPAN=71259;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:17:21:0.8:50.3,0,0.8:0:17:-52.77:52.77\n16\t25328890\t758100:1\tA\tA[16:25331806[\t99\tPASS\tDISC_MAPQ=59;EVDNC=DSCRD;IMPRECISE;MAPQ=59;MATEID=758100:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=16:25328890(+)-16:25331806(-)__16_25308501_25333501D;SPAN=2916;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:39:6:10.8:118.8,10.8,0:0:39:-118.8:118.8\n16\t25331806\t758100:2\tT\t]16:25328890]T\t99\tPASS\tDISC_MAPQ=59;EVDNC=DSCRD;IMPRECISE;MAPQ=59;MATEID=758100:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=16:25328890(+)-16:25331806(-)__16_25308501_25333501D;SPAN=2916;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:39:6:10.8:118.8,10.8,0:0:39:-118.8:118.8\n16\t25806596\t916305:1\tT\t]22:28669594]T\t0\tPASS\tEVDNC=ASSMB;HOMSEQ=TT;MAPQ=60;MATEID=916305:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_22_28665001_28690001_17C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:116:0.5:0.5,0,290.9:10:0:-0.4034:18.55\n16\t25844053\t887220:1\tC\tC[20:57997438[\t16\tPASS\tEVDNC=ASSMB;INSERTION=ACTCCAGCAGTTATGTACTATATATATATAT;MAPQ=60;MATEID=887220:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_57991501_58016501_94C;SPAN=-1;SUBN=8;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:58:16.7:16.7,0,128.9:10:0:-16.71:21.77\n16\t26374051\t758532:1\tT\t]16:26375000]T\t99\tPASS\tDISC_MAPQ=52;EVDNC=ASDIS;HOMSEQ=TGGATGGATGGGTG;MAPQ=60;MATEID=758532:2;MATENM=0;NM=7;NUMPARTS=2;SCTG=c_16_26362001_26387001_113C;SPAN=949;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:44:55:7.7:129.8,0,7.7:12:36:-136.1:136.1\n16\t26375000\t758532:2\tG\tG[16:26374051[\t99\tPASS\tDISC_MAPQ=56;EVDNC=ASDIS;HOMSEQ=TGGATGGATGGGTG;MAPQ=37;MATEID=758532:1;MATENM=7;NM=0;NUMPARTS=2;SCTG=c_16_26362001_26387001_113C;SPAN=949;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:44:55:7.7:129.8,0,7.7:12:36:-136.1:136.1\n16\t26596716\t758591:1\tT\tT[16:26597045[\t37\tPASS\tDISC_MAPQ=59;EVDNC=ASDIS;HOMSEQ=CCTCTTCACATCTT;MAPQ=60;MATEID=758591:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_16_26582501_26607501_31C;SPAN=329;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:21:14:37.1,0,14:7:8:-37.47:37.47\n16\t26597045\t758591:2\tC\t]16:26596716]C\t37\tPASS\tDISC_MAPQ=58;EVDNC=ASDIS;HOMSEQ=CCTCTTCACATCTT;MAPQ=60;MATEID=758591:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_16_26582501_26607501_31C;SPAN=329;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:21:14:37.1,0,14:7:8:-37.47:37.47\n16\t27941595\t759035:1\tC\t[16:27942199[C\t99\tPASS\tDISC_MAPQ=55;EVDNC=ASDIS;HOMSEQ=CCCGGGAGGCAGAGGTTGCCGTGAGCCAAGATTGTGCCACTGCACTC;MAPQ=60;MATEID=759035:2;MATENM=3;NM=0;NUMPARTS=2;SCTG=c_16_27930001_27955001_145C;SPAN=604;SUBN=5;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:45:37:12.6:138.6,12.6,0:31:29:-138.6:138.6\n16\t27942199\t759035:2\tG\t[16:27941595[G\t99\tPASS\tDISC_MAPQ=28;EVDNC=ASDIS;HOMSEQ=CCCGGGAGGCAGAGGTTGCCGTGAGCCAAGATTGTGCCACTGCACTC;MAPQ=60;MATEID=759035:1;MATENM=0;NM=3;NUMPARTS=2;SCTG=c_16_27930001_27955001_145C;SPAN=604;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:45:37:12.6:138.6,12.6,0:31:29:-138.6:138.6\n16\t29226840\t759567:1\tC\tC]16:29227193]\t23\tPASS\tDISC_MAPQ=25;EVDNC=DSCRD;IMPRECISE;MAPQ=25;MATEID=759567:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=16:29226840(+)-16:29227193(+)__16_29204001_29229001D;SPAN=353;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:8:0:2.1:23.1,2.1,0:0:8:-23.11:23.11\n16\t29227193\t759567:2\tA\tA]16:29226840]\t23\tPASS\tDISC_MAPQ=52;EVDNC=DSCRD;IMPRECISE;MAPQ=52;MATEID=759567:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=16:29226840(+)-16:29227193(+)__16_29204001_29229001D;SPAN=353;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:8:0:2.1:23.1,2.1,0:0:8:-23.11:23.11\n16\t31103571\t760178:2\tC\t[2:3592332[C\t25\tPASS\tDISC_MAPQ=9;EVDNC=ASDIS;HOMSEQ=CTCTCC;MAPQ=37;MATEID=760178:1;MATENM=0;NM=4;NUMPARTS=2;SCTG=c_16_31090501_31115501_14C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:17:15.2:25.1,0,15.2:8:2:-24.99:24.99\n16\t31371775\t760282:2\tG\t]9:107182828]G\t24\tPASS\tEVDNC=ASSMB;INSERTION=TATATACATTAAACAA;MAPQ=60;MATEID=760282:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_16_31360001_31385001_63C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:19:21.2:24.5,0,21.2:9:0:-24.37:24.37\n16\t34226949\t762361:1\tA\t]16:34231988]A\t85\tPASS\tDISC_MAPQ=58;EVDNC=DSCRD;IMPRECISE;MAPQ=58;MATEID=762361:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=16:34226949(-)-16:34231988(+)__16_34226501_34251501D;SPAN=5039;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:31:59:62.6:85.7,0,62.6:0:31:-85.93:85.93\n16\t34231988\t762361:2\tC\tC[16:34226949[\t85\tPASS\tDISC_MAPQ=59;EVDNC=DSCRD;IMPRECISE;MAPQ=59;MATEID=762361:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=16:34226949(-)-16:34231988(+)__16_34226501_34251501D;SPAN=5039;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:31:59:62.6:85.7,0,62.6:0:31:-85.93:85.93\n16\t34277222\t762434:1\tA\tA[16:36768349[\t99\tPASS\tDISC_MAPQ=8;EVDNC=ASDIS;HOMSEQ=CTAGACAGAAGAATTCTCAGTAACTTCCTTGTGTTGTGTGTATTCA;MAPQ=31;MATEID=762434:2;MATENM=0;NM=12;NUMPARTS=2;SCTG=c_16_34275501_34300501_207C;SPAN=2491127;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:40:36:11.1:122.1,11.1,0:33:10:-122.1:122.1\n16\t34647464\t762802:1\tA\t]16:34750727]A\t59\tPASS\tEVDNC=ASSMB;HOMSEQ=AT;MAPQ=60;MATEID=762802:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_16_34741001_34766001_84C;SPAN=103263;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:19:22:2.7:59.4,2.7,0:19:0:-60.34:60.34\n16\t34714098\t762605:2\tG\tG]7:61065398]\t82\tPASS\tDISC_MAPQ=5;EVDNC=ASDIS;INSERTION=CAAATAGACT;MAPQ=49;MATEID=762605:1;MATENM=7;NM=20;NUMPARTS=2;SCTG=c_16_34692001_34717001_199C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:28:35:3.5:82.7,0,3.5:21:10:-86.59:86.59\n16\t34715602\t762653:1\tT\tT[16:36241058[\t47\tPASS\tDISC_MAPQ=12;EVDNC=TSI_G;HOMSEQ=TGATGATTCCATTTGAGTCCATTCAATGGTGATTAAATTCGATTCCATTTGATGATTCCATTCAATTCCAT;INSERTION=TCCATTTGATGATTCCATTCAATTCCATACGATGATTCCATTCCATTCCTTTCAAAGATGAATT;MAPQ=28;MATEID=762653:2;MATENM=0;NM=10;NUMPARTS=3;SCTG=c_16_34692001_34717001_133C;SECONDARY;SPAN=1525456;SUBN=5;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:17:29:24.8:47.9,0,24.8:17:4:-48.35:48.35\n16\t34750727\t762802:2\tT\tT[16:34647464[\t59\tPASS\tEVDNC=ASSMB;HOMSEQ=AT;MAPQ=60;MATEID=762802:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_16_34741001_34766001_84C;SPAN=103263;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:19:22:2.7:59.4,2.7,0:19:0:-60.34:60.34\n16\t34954400\t97080:2\tA\tA]2:91409350]\t99\tPASS\tDISC_MAPQ=18;EVDNC=DSCRD;IMPRECISE;MAPQ=2;MATEID=97080:1;MATENM=5;NM=2;NUMPARTS=2;SCTG=c_2_91385001_91410001_138C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:38:38:10.5:115.5,10.5,0:27:15:-115.5:115.5\n16\t35481713\t763324:2\tA\t]15:56767901]A\t29\tPASS\tEVDNC=ASSMB;HOMSEQ=A;MAPQ=60;MATEID=763324:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_16_35476001_35501001_13C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:13:2.9:29.3,0,2.9:10:0:-30.55:30.55\n16\t36178073\t395755:2\tT\t[7:58048127[T\t19\tPASS\tDISC_MAPQ=26;EVDNC=DSCRD;IMPRECISE;MAPQ=26;MATEID=395755:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:58048127(-)-16:36178073(-)__7_58040501_58065501D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:37:19.4:19.4,0,72.2:0:9:-19.31:21.11\n16\t36241058\t762653:2\tC\t]16:34715602]C\t47\tPASS\tDISC_MAPQ=15;EVDNC=TSI_G;HOMSEQ=TGATGATTCCATTTGAGTCCATTCAATGGTGATTAAATTCGATTCCATTTGATGATTCCATTCAATTCCAT;INSERTION=TCCATTTGATGATTCCATTCAATTCCATACGATGATTCCATTCCATTCCTTTCAAAGATGAATT;MAPQ=38;MATEID=762653:1;MATENM=10;NM=0;NUMPARTS=3;SCTG=c_16_34692001_34717001_133C;SECONDARY;SPAN=1525456;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:17:29:24.8:47.9,0,24.8:17:4:-48.35:48.35\n16\t36315759\t764049:1\tA\tA[16:36322173[\t46\tPASS\tDISC_MAPQ=33;EVDNC=DSCRD;IMPRECISE;MAPQ=33;MATEID=764049:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=16:36315759(+)-16:36322173(-)__16_36309001_36334001D;SPAN=6414;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:15:18:1.5:46.2,1.5,0:0:15:-47.02:47.02\n16\t36322173\t764049:2\tA\t]16:36315759]A\t46\tPASS\tDISC_MAPQ=54;EVDNC=DSCRD;IMPRECISE;MAPQ=54;MATEID=764049:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=16:36315759(+)-16:36322173(-)__16_36309001_36334001D;SPAN=6414;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:15:18:1.5:46.2,1.5,0:0:15:-47.02:47.02\n16\t36325746\t764074:1\tT\t]16:38254796]T\t99\tPASS\tEVDNC=ASSMB;HOMSEQ=TAAAAACTAGACAGAA;MAPQ=41;MATEID=764074:2;MATENM=0;NM=3;NUMPARTS=2;SCTG=c_16_36309001_36334001_69C;SPAN=1929050;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:63:0:17.4:191.4,17.4,0:63:0:-191.4:191.4\n16\t36326163\t764132:1\tT\tT[16:36335907[\t28\tPASS\tDISC_MAPQ=40;EVDNC=DSCRD;IMPRECISE;MAPQ=40;MATEID=764132:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=16:36326163(+)-16:36335907(-)__16_36333501_36358501D;SPAN=9744;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:40:28.4:28.4,0,71.3:0:12:-28.37:29.43\n16\t36326237\t764133:1\tT\tT]16:36337448]\t17\tPASS\tDISC_MAPQ=17;EVDNC=DSCRD;IMPRECISE;MAPQ=17;MATEID=764133:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=16:36326237(+)-16:36337448(+)__16_36333501_36358501D;SPAN=11211;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:31:17.9:17.9,0,57.5:0:8:-17.69:19\n16\t36335907\t764132:2\tC\t]16:36326163]C\t28\tPASS\tDISC_MAPQ=26;EVDNC=DSCRD;IMPRECISE;MAPQ=26;MATEID=764132:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=16:36326163(+)-16:36335907(-)__16_36333501_36358501D;SPAN=9744;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:40:28.4:28.4,0,71.3:0:12:-28.37:29.43\n16\t36337448\t764133:2\tC\tC]16:36326237]\t17\tPASS\tDISC_MAPQ=39;EVDNC=DSCRD;IMPRECISE;MAPQ=39;MATEID=764133:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=16:36326237(+)-16:36337448(+)__16_36333501_36358501D;SPAN=11211;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:31:17.9:17.9,0,57.5:0:8:-17.69:19\n16\t36342786\t764455:1\tT\tT[16:38253962[\t41\tPASS\tDISC_MAPQ=31;EVDNC=DSCRD;IMPRECISE;MAPQ=31;MATEID=764455:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=16:36342786(+)-16:38253962(-)__16_38244501_38269501D;SPAN=1911176;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:16:39:41.9:41.9,0,55.1:0:16:-41.85:41.97\n16\t36343245\t764152:1\tA\t]16:36351031]A\t26\tPASS\tDISC_MAPQ=29;EVDNC=DSCRD;IMPRECISE;MAPQ=29;MATEID=764152:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=16:36343245(-)-16:36351031(+)__16_36333501_36358501D;SPAN=7786;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:46:26.9:26.9,0,86.3:0:12:-26.68:28.57\n16\t36348587\t764356:1\tT\tT[16:37915278[\t56\tPASS\tDISC_MAPQ=31;EVDNC=DSCRD;IMPRECISE;MAPQ=31;MATEID=764356:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=16:36348587(+)-16:37915278(-)__16_37901501_37926501D;SPAN=1566691;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:19:10:5.1:56.1,5.1,0:0:19:-56.11:56.11\n16\t36350693\t764203:1\tA\t]16:36714722]A\t99\tPASS\tDISC_MAPQ=47;EVDNC=DSCRD;IMPRECISE;MAPQ=47;MATEID=764203:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=16:36350693(-)-16:36714722(+)__16_36701001_36726001D;SPAN=364029;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:39:6:10.8:118.8,10.8,0:0:39:-118.8:118.8\n16\t36351031\t764152:2\tA\tA[16:36343245[\t26\tPASS\tDISC_MAPQ=51;EVDNC=DSCRD;IMPRECISE;MAPQ=51;MATEID=764152:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=16:36343245(-)-16:36351031(+)__16_36333501_36358501D;SPAN=7786;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:46:26.9:26.9,0,86.3:0:12:-26.68:28.57\n16\t36353193\t847883:1\tA\tA[19:27240874[\t26\tPASS\tDISC_MAPQ=29;EVDNC=DSCRD;IMPRECISE;MAPQ=29;MATEID=847883:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=16:36353193(+)-19:27240874(-)__19_27219501_27244501D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:9:3:2.4:26.4,2.4,0:0:9:-26.41:26.41\n16\t36356275\t764168:1\tG\t]16:36379416]G\t46\tPASS\tDISC_MAPQ=33;EVDNC=DSCRD;IMPRECISE;MAPQ=33;MATEID=764168:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=16:36356275(-)-16:36379416(+)__16_36358001_36383001D;SPAN=23141;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:15:14:4.2:46.2,4.2,0:0:15:-46.21:46.21\n16\t36379416\t764168:2\tA\tA[16:36356275[\t46\tPASS\tDISC_MAPQ=38;EVDNC=DSCRD;IMPRECISE;MAPQ=38;MATEID=764168:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=16:36356275(-)-16:36379416(+)__16_36358001_36383001D;SPAN=23141;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:15:14:4.2:46.2,4.2,0:0:15:-46.21:46.21\n16\t36714399\t764204:1\tG\t]16:36909413]G\t79\tPASS\tDISC_MAPQ=15;EVDNC=DSCRD;IMPRECISE;MAPQ=15;MATEID=764204:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=16:36714399(-)-16:36909413(+)__16_36701001_36726001D;SPAN=195014;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:26:8:7.2:79.2,7.2,0:0:26:-79.22:79.22\n16\t36714722\t764203:2\tA\tA[16:36350693[\t99\tPASS\tDISC_MAPQ=18;EVDNC=DSCRD;IMPRECISE;MAPQ=18;MATEID=764203:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=16:36350693(-)-16:36714722(+)__16_36701001_36726001D;SPAN=364029;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:39:6:10.8:118.8,10.8,0:0:39:-118.8:118.8\n16\t36747721\t764207:1\tA\t]16:37962854]A\t89\tPASS\tDISC_MAPQ=16;EVDNC=DSCRD;IMPRECISE;MAPQ=16;MATEID=764207:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=16:36747721(-)-16:37962854(+)__16_36725501_36750501D;SPAN=1215133;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:29:3:8.1:89.1,8.1,0:0:29:-89.12:89.12\n16\t36768349\t762434:2\tC\t]16:34277222]C\t99\tPASS\tDISC_MAPQ=54;EVDNC=ASDIS;HOMSEQ=CTAGACAGAAGAATTCTCAGTAACTTCCTTGTGTTGTGTGTATTCA;MAPQ=55;MATEID=762434:1;MATENM=12;NM=0;NUMPARTS=2;SCTG=c_16_34275501_34300501_207C;SPAN=2491127;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:40:36:11.1:122.1,11.1,0:33:10:-122.1:122.1\n16\t36909413\t764204:2\tT\tT[16:36714399[\t79\tPASS\tDISC_MAPQ=48;EVDNC=DSCRD;IMPRECISE;MAPQ=48;MATEID=764204:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=16:36714399(-)-16:36909413(+)__16_36701001_36726001D;SPAN=195014;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:26:8:7.2:79.2,7.2,0:0:26:-79.22:79.22\n16\t37104034\t764363:1\tT\t]16:37939320]T\t59\tPASS\tDISC_MAPQ=32;EVDNC=DSCRD;IMPRECISE;MAPQ=32;MATEID=764363:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=16:37104034(-)-16:37939320(+)__16_37926001_37951001D;SPAN=835286;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:20:19:5.4:59.4,5.4,0:0:20:-59.41:59.41\n16\t37915278\t764356:2\tT\t]16:36348587]T\t56\tPASS\tDISC_MAPQ=32;EVDNC=DSCRD;IMPRECISE;MAPQ=32;MATEID=764356:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=16:36348587(+)-16:37915278(-)__16_37901501_37926501D;SPAN=1566691;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:19:10:5.1:56.1,5.1,0:0:19:-56.11:56.11\n16\t37938824\t764402:1\tT\t]16:38166645]T\t32\tPASS\tDISC_MAPQ=37;EVDNC=DSCRD;IMPRECISE;MAPQ=37;MATEID=764402:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=16:37938824(-)-16:38166645(+)__16_38146501_38171501D;SPAN=227821;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:15:5.6:32,0,5.6:0:11:-33.15:33.15\n16\t37939320\t764363:2\tT\tT[16:37104034[\t59\tPASS\tDISC_MAPQ=44;EVDNC=DSCRD;IMPRECISE;MAPQ=44;MATEID=764363:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=16:37104034(-)-16:37939320(+)__16_37926001_37951001D;SPAN=835286;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:20:19:5.4:59.4,5.4,0:0:20:-59.41:59.41\n16\t37962854\t764207:2\tA\tA[16:36747721[\t89\tPASS\tDISC_MAPQ=28;EVDNC=DSCRD;IMPRECISE;MAPQ=28;MATEID=764207:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=16:36747721(-)-16:37962854(+)__16_36725501_36750501D;SPAN=1215133;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:29:3:8.1:89.1,8.1,0:0:29:-89.12:89.12\n16\t38166645\t764402:2\tT\tT[16:37938824[\t32\tPASS\tDISC_MAPQ=31;EVDNC=DSCRD;IMPRECISE;MAPQ=31;MATEID=764402:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=16:37938824(-)-16:38166645(+)__16_38146501_38171501D;SPAN=227821;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:15:5.6:32,0,5.6:0:11:-33.15:33.15\n16\t38253962\t764455:2\tC\t]16:36342786]C\t41\tPASS\tDISC_MAPQ=19;EVDNC=DSCRD;IMPRECISE;MAPQ=19;MATEID=764455:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=16:36342786(+)-16:38253962(-)__16_38244501_38269501D;SPAN=1911176;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:16:39:41.9:41.9,0,55.1:0:16:-41.85:41.97\n16\t38254796\t764074:2\tA\tA[16:36325746[\t99\tPASS\tEVDNC=ASSMB;HOMSEQ=TAAAAACTAGACAGAA;MAPQ=56;MATEID=764074:1;MATENM=3;NM=0;NUMPARTS=2;SCTG=c_16_36309001_36334001_69C;SPAN=1929050;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:63:0:17.4:191.4,17.4,0:63:0:-191.4:191.4\n16\t48247011\t764887:1\tG\t]16:48247537]G\t27\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=764887:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=16:48247011(-)-16:48247537(+)__16_48240501_48265501D;SPAN=526;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:31:27.8:27.8,0,47.6:0:11:-27.6:27.96\n16\t48247537\t764887:2\tT\tT[16:48247011[\t27\tPASS\tDISC_MAPQ=56;EVDNC=DSCRD;IMPRECISE;MAPQ=56;MATEID=764887:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=16:48247011(-)-16:48247537(+)__16_48240501_48265501D;SPAN=526;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:31:27.8:27.8,0,47.6:0:11:-27.6:27.96\n16\t48871495\t764957:1\tA\tA]16:48872234]\t46\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=764957:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=16:48871495(+)-16:48872234(+)__16_48853001_48878001D;SPAN=739;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:15:7:4.2:46.2,4.2,0:0:15:-46.21:46.21\n16\t48871899\t764958:1\tG\t[16:48872323[G\t75\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=764958:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=16:48871899(-)-16:48872323(-)__16_48853001_48878001D;SPAN=424;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:25:13:6.9:75.9,6.9,0:0:25:-75.92:75.92\n16\t48872234\t764957:2\tT\tT]16:48871495]\t46\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=764957:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=16:48871495(+)-16:48872234(+)__16_48853001_48878001D;SPAN=739;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:15:7:4.2:46.2,4.2,0:0:15:-46.21:46.21\n16\t48872323\t764958:2\tT\t[16:48871899[T\t75\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=764958:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=16:48871899(-)-16:48872323(-)__16_48853001_48878001D;SPAN=424;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:25:13:6.9:75.9,6.9,0:0:25:-75.92:75.92\n16\t55760663\t766440:1\tC\t[16:55833056[C\t21\tPASS\tDISC_MAPQ=53;EVDNC=DSCRD;IMPRECISE;MAPQ=53;MATEID=766440:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=16:55760663(-)-16:55833056(-)__16_55811001_55836001D;SPAN=72393;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:17:18.5:21.8,0,18.5:0:8:-21.63:21.63\n16\t55833056\t766440:2\tC\t[16:55760663[C\t21\tPASS\tDISC_MAPQ=41;EVDNC=DSCRD;IMPRECISE;MAPQ=41;MATEID=766440:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=16:55760663(-)-16:55833056(-)__16_55811001_55836001D;SPAN=72393;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:17:18.5:21.8,0,18.5:0:8:-21.63:21.63\n16\t58613311\t767109:1\tC\tC[16:58616361[\t62\tPASS\tEVDNC=ASSMB;HOMSEQ=CTCCCAAAGTGCTGGGATTACAGGC;MAPQ=60;MATEID=767109:2;MATENM=7;NM=1;NUMPARTS=2;SCTG=c_16_58604001_58629001_1C;SPAN=3050;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:21:11:5.7:62.7,5.7,0:21:0:-62.72:62.72\n16\t58616361\t767109:2\tC\t]16:58613311]C\t62\tPASS\tEVDNC=ASSMB;HOMSEQ=CTCCCAAAGTGCTGGGATTACAGGC;MAPQ=60;MATEID=767109:1;MATENM=1;NM=7;NUMPARTS=2;SCTG=c_16_58604001_58629001_1C;SPAN=3050;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:21:11:5.7:62.7,5.7,0:21:0:-62.72:62.72\n16\t61045452\t692473:2\tA\tA]14:37300358]\t22\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=692473:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=14:37300358(+)-16:61045452(+)__14_37289001_37314001D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:13:9.5:22.7,0,9.5:0:8:-23.02:23.02\n16\t61225881\t767719:1\tA\t]16:61227731]A\t34\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=767719:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_16_61225501_61250501_17C;SPAN=1850;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:41:34.7:34.7,0,67.7:14:0:-34.69:35.3\n16\t61227731\t767719:2\tT\tT[16:61225881[\t34\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=767719:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_16_61225501_61250501_17C;SPAN=1850;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:41:34.7:34.7,0,67.7:14:0:-34.69:35.3\n16\t61747718\t767831:1\tT\t]16:61755731]T\t35\tPASS\tEVDNC=ASSMB;INSERTION=ATTTCTAAAATTAAAATAACTGAATTT;MAPQ=60;MATEID=767831:2;MATENM=0;NM=4;NUMPARTS=2;SCTG=c_16_61740001_61765001_3C;SPAN=8013;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:37:35.9:35.9,0,55.7:14:0:-35.81:36.09\n16\t61755731\t767831:2\tA\tA[16:61747718[\t35\tPASS\tEVDNC=ASSMB;INSERTION=ATTTCTAAAATTAAAATAACTGAATTT;MAPQ=60;MATEID=767831:1;MATENM=4;NM=0;NUMPARTS=2;SCTG=c_16_61740001_61765001_3C;SPAN=8013;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:37:35.9:35.9,0,55.7:14:0:-35.81:36.09\n16\t63759379\t768310:2\tA\tA[4:21714832[\t62\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TTATTTTATTTTATTTTATTTTATTTTATTTTA;MAPQ=60;MATEID=768310:1;MATENM=0;NM=10;NUMPARTS=2;SCTG=c_16_63749001_63774001_22C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:21:16:5.7:62.7,5.7,0:19:2:-62.72:62.72\n16\t65129169\t1010103:1\tT\t[Un_JTFH01001895v1_decoy:1[T\t33\tPASS\tDISC_MAPQ=255;EVDNC=TSI_G;HOMSEQ=TATTTTATATATTGTATAAGAATATATA;INSERTION=TATGTAATATCTATTTTATACACTATACAAGAATATGTAATATCTAATTATTTTATATACTGTGTAAGAATATATAACATATAGTTATTTTATACATTGTATAAGAATATATAATATCTAGTTATTTTATACATTGTATAAGAATATATAATATCTAGTTATTTTATATATTGTATAAGAATATATAATATCTAGT;MAPQ=60;MATEID=1010103:2;MATENM=0;NM=0;NUMPARTS=5;SCTG=c_2738_1_2599_7C;SECONDARY;SPAN=-1;SUBN=3;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:11:4:3:33,3,0:11:0:-33.01:33.01\n16\t69033084\t769342:1\tG\t]16:69161208]G\t16\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;MAPQ=60;MATEID=769342:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_16_69016501_69041501_7C;SPAN=128124;SUBN=2;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:7:24:16.4:16.4,0,42.8:5:3:-16.36:17.07\n16\t69161208\t769342:2\tT\tT[16:69033084[\t16\tPASS\tDISC_MAPQ=43;EVDNC=ASDIS;MAPQ=60;MATEID=769342:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_16_69016501_69041501_7C;SPAN=128124;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:7:24:16.4:16.4,0,42.8:5:3:-16.36:17.07\n16\t69727926\t769622:1\tC\t[16:69728993[C\t99\tPASS\tDISC_MAPQ=53;EVDNC=ASDIS;HOMSEQ=CTTGA;MAPQ=60;MATEID=769622:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_16_69727001_69752001_46C;SPAN=1067;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:33:34:9.3:102.3,9.3,0:20:17:-102.3:102.3\n16\t69728344\t769625:1\tG\tG]16:69729043]\t85\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=769625:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=16:69728344(+)-16:69729043(+)__16_69727001_69752001D;SPAN=699;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:28:26:7.8:85.8,7.8,0:0:28:-85.82:85.82\n16\t69728993\t769622:2\tT\t[16:69727926[T\t99\tPASS\tDISC_MAPQ=57;EVDNC=ASDIS;HOMSEQ=CTTGA;MAPQ=60;MATEID=769622:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_16_69727001_69752001_46C;SPAN=1067;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:33:34:9.3:102.3,9.3,0:20:17:-102.3:102.3\n16\t69729043\t769625:2\tA\tA]16:69728344]\t85\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=769625:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=16:69728344(+)-16:69729043(+)__16_69727001_69752001D;SPAN=699;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:28:26:7.8:85.8,7.8,0:0:28:-85.82:85.82\n16\t69820428\t769676:1\tG\tG[16:69824903[\t29\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;INSERTION=T;MAPQ=60;MATEID=769676:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_16_69825001_69850001_82C;SPAN=4475;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:10:7:2.7:29.7,2.7,0:8:2:-29.71:29.71\n16\t69820783\t769677:1\tA\t]16:69825118]A\t35\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;INSERTION=CAAAAGTGAACA;MAPQ=60;MATEID=769677:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_16_69825001_69850001_98C;SPAN=4335;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:15:2.3:35.3,0,2.3:6:9:-37.11:37.11\n16\t69824903\t769676:2\tT\t]16:69820428]T\t29\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;INSERTION=T;MAPQ=60;MATEID=769676:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_16_69825001_69850001_82C;SPAN=4475;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:10:7:2.7:29.7,2.7,0:8:2:-29.71:29.71\n16\t69825118\t769677:2\tA\tA[16:69820783[\t35\tPASS\tDISC_MAPQ=54;EVDNC=ASDIS;INSERTION=CAAAAGTGAACA;MAPQ=60;MATEID=769677:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_16_69825001_69850001_98C;SPAN=4335;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:15:2.3:35.3,0,2.3:6:9:-37.11:37.11\n16\t70087940\t769777:2\tT\t[2:31423208[T\t99\tPASS\tDISC_MAPQ=31;EVDNC=ASDIS;MAPQ=60;MATEID=769777:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_16_70070001_70095001_81C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:35:14:9.6:105.6,9.6,0:26:21:-105.6:105.6\n16\t70519121\t769901:1\tT\tT[16:70519427[\t15\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AGGATTTGCATTTCT;MAPQ=60;MATEID=769901:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_16_70511001_70536001_3C;SPAN=306;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:7:27:15.5:15.5,0,51.8:5:4:-15.52:16.64\n16\t70519427\t769901:2\tA\t]16:70519121]A\t15\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AGGATTTGCATTTCT;MAPQ=60;MATEID=769901:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_16_70511001_70536001_3C;SPAN=306;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:7:27:15.5:15.5,0,51.8:5:4:-15.52:16.64\n16\t72122752\t770476:1\tC\tC[16:72212287[\t46\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=C;MAPQ=60;MATEID=770476:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_16_72201501_72226501_29C;SPAN=89535;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:16:22:7.1:46.7,0,7.1:9:9:-48.1:48.1\n16\t72212287\t770476:2\tC\t]16:72122752]C\t46\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=C;MAPQ=60;MATEID=770476:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_16_72201501_72226501_29C;SPAN=89535;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:16:22:7.1:46.7,0,7.1:9:9:-48.1:48.1\n16\t74811117\t771521:2\tG\t]7:20669897]G\t26\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=771521:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:20669897(+)-16:74811117(-)__16_74798501_74823501D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:37:26:26,0,65.6:0:11:-25.91:26.93\n16\t78122363\t772813:1\tT\t]16:78137583]T\t16\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=772813:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_16_78130501_78155501_79C;SPAN=15220;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:35:16.7:16.7,0,69.5:8:0:-16.57:18.51\n16\t78137583\t772813:2\tT\tT[16:78122363[\t16\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=772813:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_16_78130501_78155501_79C;SPAN=15220;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:35:16.7:16.7,0,69.5:8:0:-16.57:18.51\n16\t78199550\t772890:1\tC\tC[16:78326597[\t19\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=CTC;MAPQ=60;MATEID=772890:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_16_78326501_78351501_127C;SPAN=127047;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:7:4:1.8:19.8,1.8,0:6:5:-19.8:19.8\n16\t78326597\t772890:2\tC\t]16:78199550]C\t19\tPASS\tDISC_MAPQ=51;EVDNC=ASDIS;HOMSEQ=CTC;MAPQ=60;MATEID=772890:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_16_78326501_78351501_127C;SPAN=127047;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:7:4:1.8:19.8,1.8,0:6:5:-19.8:19.8\n16\t78340090\t772941:1\tT\tT[16:78456846[\t27\tPASS\tDISC_MAPQ=56;EVDNC=DSCRD;IMPRECISE;MAPQ=56;MATEID=772941:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=16:78340090(+)-16:78456846(-)__16_78449001_78474001D;SPAN=116756;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:30:27.8:27.8,0,47.6:0:11:-27.88:28.16\n16\t78456846\t772941:2\tA\t]16:78340090]A\t27\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=772941:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=16:78340090(+)-16:78456846(-)__16_78449001_78474001D;SPAN=116756;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:30:27.8:27.8,0,47.6:0:11:-27.88:28.16\n16\t81140260\t774106:1\tC\tC[16:81140740[\t99\tPASS\tDISC_MAPQ=58;EVDNC=ASDIS;HOMSEQ=GGAGGCAGAGGTTGCAGTGAGCCGAGATC;MAPQ=60;MATEID=774106:2;MATENM=0;NM=8;NUMPARTS=2;SCTG=c_16_81119501_81144501_135C;SPAN=480;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:56:16:15.6:171.6,15.6,0:33:26:-171.6:171.6\n16\t81140740\t774106:2\tG\t]16:81140260]G\t99\tPASS\tDISC_MAPQ=57;EVDNC=ASDIS;HOMSEQ=GGAGGCAGAGGTTGCAGTGAGCCGAGATC;MAPQ=60;MATEID=774106:1;MATENM=8;NM=0;NUMPARTS=2;SCTG=c_16_81119501_81144501_135C;SPAN=480;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:56:16:15.6:171.6,15.6,0:33:26:-171.6:171.6\n16\t81577137\t774271:1\tA\t]16:81578194]A\t17\tPASS\tDISC_MAPQ=27;EVDNC=DSCRD;IMPRECISE;MAPQ=27;MATEID=774271:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=16:81577137(-)-16:81578194(+)__16_81560501_81585501D;SPAN=1057;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:55:17.6:17.6,0,119.9:0:10:-17.55:22.02\n16\t81578194\t774271:2\tT\tT[16:81577137[\t17\tPASS\tDISC_MAPQ=16;EVDNC=DSCRD;IMPRECISE;MAPQ=16;MATEID=774271:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=16:81577137(-)-16:81578194(+)__16_81560501_81585501D;SPAN=1057;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:55:17.6:17.6,0,119.9:0:10:-17.55:22.02\n16\t81765054\t774339:1\tC\t]16:81765621]C\t99\tPASS\tEVDNC=ASSMB;HOMSEQ=CTCCAGCCTGGGTGACAGAGTGAGA;MAPQ=60;MATEID=774339:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_16_81756501_81781501_97C;SPAN=567;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:53:90:77:149.6,0,77:53:0:-150.9:150.9\n16\t81765621\t774339:2\tA\tA[16:81765054[\t99\tPASS\tEVDNC=ASSMB;HOMSEQ=CTCCAGCCTGGGTGACAGAGTGAGA;MAPQ=60;MATEID=774339:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_16_81756501_81781501_97C;SPAN=567;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:53:90:77:149.6,0,77:53:0:-150.9:150.9\n16\t82757477\t774754:1\tA\t]16:82757614]A\t47\tPASS\tEVDNC=ASSMB;HOMSEQ=A;MAPQ=60;MATEID=774754:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_16_82736501_82761501_24C;SPAN=137;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:18:43:47.3:47.3,0,60.5:18:0:-47.33:47.43\n16\t82757614\t774754:2\tA\tA[16:82757477[\t47\tPASS\tEVDNC=ASSMB;HOMSEQ=A;MAPQ=60;MATEID=774754:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_16_82736501_82761501_24C;SPAN=137;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:18:43:47.3:47.3,0,60.5:18:0:-47.33:47.43\n16\t84336396\t775449:1\tC\tC[16:84336829[\t0\tPASS\tEVDNC=ASSMB;HOMSEQ=GATCACGCCATTGCACTCCAGCCTGGGC;MAPQ=60;MATEID=775449:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_16_84329001_84354001_39C;SPAN=433;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/0:4:52:1.2:0,1.2,132:4:0:1.413:7.213\n16\t84336829\t775449:2\tG\t]16:84336396]G\t0\tPASS\tEVDNC=ASSMB;HOMSEQ=GATCACGCCATTGCACTCCAGCCTGGGC;MAPQ=60;MATEID=775449:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_16_84329001_84354001_39C;SPAN=433;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/0:4:52:1.2:0,1.2,132:4:0:1.413:7.213\n16\t84467832\t775519:1\tC\tC[16:84470510[\t26\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;INSERTION=CAGCTGCCCCAGGATGGACC;MAPQ=60;MATEID=775519:2;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_16_84451501_84476501_186C;SPAN=2678;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:36:26.3:26.3,0,62.6:10:3:-26.19:27.08\n16\t84470510\t775519:2\tC\t]16:84467832]C\t26\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;INSERTION=CAGCTGCCCCAGGATGGACC;MAPQ=60;MATEID=775519:1;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_16_84451501_84476501_186C;SPAN=2678;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:36:26.3:26.3,0,62.6:10:3:-26.19:27.08\n16\t85115938\t775803:1\tG\tG[16:85116470[\t58\tPASS\tDISC_MAPQ=58;EVDNC=ASDIS;HOMSEQ=GACCTCAGGTGATCTGCCCACCTCGGCCTCCCAAAGTGCTGGGATTACAGGCATGAG;MAPQ=60;MATEID=775803:2;MATENM=0;NM=4;NUMPARTS=2;SCTG=c_16_85113001_85138001_101C;SPAN=532;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:20:28:11.9:58.1,0,11.9:7:16:-59.83:59.83\n16\t85116470\t775803:2\tG\t]16:85115938]G\t58\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=GACCTCAGGTGATCTGCCCACCTCGGCCTCCCAAAGTGCTGGGATTACAGGCATGAG;MAPQ=60;MATEID=775803:1;MATENM=4;NM=0;NUMPARTS=2;SCTG=c_16_85113001_85138001_101C;SPAN=532;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:20:28:11.9:58.1,0,11.9:7:16:-59.83:59.83\n16\t85155108\t775824:1\tT\t[16:85156196[T\t99\tPASS\tDISC_MAPQ=56;EVDNC=ASDIS;HOMSEQ=TGG;MAPQ=60;MATEID=775824:2;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_16_85137501_85162501_132C;SPAN=1088;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:44:41:12.3:135.3,12.3,0:25:31:-135.3:135.3\n16\t85156196\t775824:2\tC\t[16:85155108[C\t99\tPASS\tDISC_MAPQ=57;EVDNC=ASDIS;HOMSEQ=TGG;MAPQ=60;MATEID=775824:1;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_16_85137501_85162501_132C;SPAN=1088;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:44:41:12.3:135.3,12.3,0:25:31:-135.3:135.3\n16\t85268887\t775861:1\tG\tG[16:85270785[\t50\tPASS\tEVDNC=ASSMB;HOMSEQ=GG;MAPQ=60;MATEID=775861:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_16_85260001_85285001_111C;SPAN=1898;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:19:44:50.3:50.3,0,60.2:19:0:-50.35:50.4\n16\t85270785\t775861:2\tG\t]16:85268887]G\t50\tPASS\tEVDNC=ASSMB;HOMSEQ=GG;MAPQ=60;MATEID=775861:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_16_85260001_85285001_111C;SPAN=1898;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:19:44:50.3:50.3,0,60.2:19:0:-50.35:50.4\n16\t86250715\t776364:1\tT\tT[16:86251011[\t59\tPASS\tEVDNC=ASSMB;HOMSEQ=CTCCTGAATTCTT;MAPQ=60;MATEID=776364:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_16_86240001_86265001_113C;SPAN=296;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:21:36:29.6:59.3,0,29.6:21:0:-59.66:59.66\n16\t86251011\t776364:2\tC\t]16:86250715]C\t59\tPASS\tEVDNC=ASSMB;HOMSEQ=CTCCTGAATTCTT;MAPQ=60;MATEID=776364:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_16_86240001_86265001_113C;SPAN=296;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:21:36:29.6:59.3,0,29.6:21:0:-59.66:59.66\n16\t87502284\t776954:1\tC\t]16:87502875]C\t15\tPASS\tDISC_MAPQ=39;EVDNC=DSCRD;IMPRECISE;MAPQ=39;MATEID=776954:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=16:87502284(-)-16:87502875(+)__16_87489501_87514501D;SPAN=591;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:62:15.8:15.8,0,137.9:0:10:-15.58:21.45\n16\t87502875\t776954:2\tT\tT[16:87502284[\t15\tPASS\tDISC_MAPQ=20;EVDNC=DSCRD;IMPRECISE;MAPQ=20;MATEID=776954:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=16:87502284(-)-16:87502875(+)__16_87489501_87514501D;SPAN=591;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:62:15.8:15.8,0,137.9:0:10:-15.58:21.45\n16\t88053093\t777152:1\tT\t]16:88053862]T\t78\tPASS\tEVDNC=ASSMB;HOMSEQ=TAACAACCACTACCACCCCCACCTCC;MAPQ=60;MATEID=777152:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_16_88053001_88078001_33C;SPAN=769;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:28:50:45.5:78.5,0,45.5:28:0:-78.78:78.78\n16\t88053862\t777152:2\tC\tC[16:88053093[\t78\tPASS\tEVDNC=ASSMB;HOMSEQ=TAACAACCACTACCACCCCCACCTCC;MAPQ=60;MATEID=777152:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_16_88053001_88078001_33C;SPAN=769;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:28:50:45.5:78.5,0,45.5:28:0:-78.78:78.78\n16\t88079246\t777183:1\tC\tC[16:88082061[\t99\tPASS\tDISC_MAPQ=56;EVDNC=DSCRD;IMPRECISE;MAPQ=56;MATEID=777183:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=16:88079246(+)-16:88082061(-)__16_88077501_88102501D;SPAN=2815;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:41:8:11.4:125.4,11.4,0:0:41:-125.4:125.4\n16\t88082061\t777183:2\tC\t]16:88079246]C\t99\tPASS\tDISC_MAPQ=56;EVDNC=DSCRD;IMPRECISE;MAPQ=56;MATEID=777183:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=16:88079246(+)-16:88082061(-)__16_88077501_88102501D;SPAN=2815;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:41:8:11.4:125.4,11.4,0:0:41:-125.4:125.4\n16\t89167027\t777836:1\tG\t]16:89259977]G\t24\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=777836:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_16_89253501_89278501_12C;SPAN=92950;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:30:24.5:24.5,0,50.9:10:0:-24.58:25.08\n16\t89259977\t777836:2\tT\tT[16:89167027[\t24\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=777836:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_16_89253501_89278501_12C;SPAN=92950;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:30:24.5:24.5,0,50.9:10:0:-24.58:25.08\n16\t90040651\t778139:1\tC\tC[Un_JTFH01000108v1_decoy:1[\t69\tPASS\tEVDNC=ASSMB;HOMSEQ=GTGGGTTTCCTGTGGCC;MAPQ=60;MATEID=778139:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_16_90037501_90062501_109C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:23:19:6.3:69.3,6.3,0:23:0:-69.32:69.32\n16\t90040651\t995643:1\tC\tC[Un_JTFH01000108v1_decoy:1[\t79\tPASS\tEVDNC=ASSMB;HOMSEQ=GTGGGTTTCCTGTGGCC;INSERTION=ACCCAGCCACAGATGGCATTTTTTTTTTTGTAAATTATTTT;MAPQ=60;MATEID=995643:2;MATENM=1;NM=1;NUMPARTS=6;SCTG=c_951_1_3374_2C;SECONDARY;SPAN=-1;SUBN=6;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:26:6:7.2:79.2,7.2,0:26:0:-79.22:79.22\n17\t494760\t778350:1\tG\t[17:495848[G\t22\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=GT;MAPQ=60;MATEID=778350:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_17_490001_515001_67C;SPAN=1088;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:26:22.4:22.4,0,42.2:4:8:-22.4:22.76\n17\t495848\t778350:2\tA\t[17:494760[A\t22\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=GT;MAPQ=60;MATEID=778350:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_17_490001_515001_67C;SPAN=1088;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:26:22.4:22.4,0,42.2:4:8:-22.4:22.76\n17\t497801\t148404:2\tT\tT[2:237561091[\t21\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TT;MAPQ=60;MATEID=148404:1;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_2_237552001_237577001_84C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:41:21.5:21.5,0,80.9:7:6:-21.49:23.47\n17\t645848\t778404:1\tA\tA[17:646775[\t82\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=GACTGGAGATAGGCTCCCACACACATCTCCGTGACTGCGTGGCCACTGCCTCCTAAGGGTCTTATCTTTTCTAATCCATATCACGGACTGGAGA;MAPQ=60;MATEID=778404:2;MATENM=2;NM=2;NUMPARTS=2;SCTG=c_17_637001_662001_78C;SPAN=927;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:27:19:7.5:82.5,7.5,0:5:23:-82.52:82.52\n17\t646775\t778404:2\tG\t]17:645848]G\t82\tPASS\tDISC_MAPQ=55;EVDNC=ASDIS;HOMSEQ=GACTGGAGATAGGCTCCCACACACATCTCCGTGACTGCGTGGCCACTGCCTCCTAAGGGTCTTATCTTTTCTAATCCATATCACGGACTGGAGA;MAPQ=60;MATEID=778404:1;MATENM=2;NM=2;NUMPARTS=2;SCTG=c_17_637001_662001_78C;SPAN=927;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:27:19:7.5:82.5,7.5,0:5:23:-82.52:82.52\n17\t820619\t778462:1\tA\tA[17:821646[\t46\tPASS\tDISC_MAPQ=50;EVDNC=ASDIS;HOMSEQ=GAGGCTGAGGCAGGAGAATGACGTGAACCCAGGAGGCGGAGCTTGCAGTGAGCCGAGATCGCACCACTGCACCCCAGCCTGGGCGACAGAGCGAGACTCTGTCTCAAAAAAAA;MAPQ=60;MATEID=778462:2;MATENM=5;NM=7;NUMPARTS=2;SCTG=c_17_808501_833501_85C;SPAN=1027;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:16:6:4.2:46.2,4.2,0:2:14:-46.21:46.21\n17\t821646\t778462:2\tG\t]17:820619]G\t46\tPASS\tDISC_MAPQ=59;EVDNC=ASDIS;HOMSEQ=GAGGCTGAGGCAGGAGAATGACGTGAACCCAGGAGGCGGAGCTTGCAGTGAGCCGAGATCGCACCACTGCACCCCAGCCTGGGCGACAGAGCGAGACTCTGTCTCAAAAAAAA;MAPQ=60;MATEID=778462:1;MATENM=7;NM=5;NUMPARTS=2;SCTG=c_17_808501_833501_85C;SPAN=1027;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:16:6:4.2:46.2,4.2,0:2:14:-46.21:46.21\n17\t898386\t778509:1\tT\tT[17:899018[\t89\tPASS\tEVDNC=ASSMB;INSERTION=GGTAAAGCTCTGTCACCCAGGCTGGAGTGCAGCGC;MAPQ=58;MATEID=778509:2;MATENM=2;NM=1;NUMPARTS=2;SCTG=c_17_882001_907001_3C;SPAN=632;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:29:13:8.1:89.1,8.1,0:29:0:-89.12:89.12\n17\t899018\t778509:2\tC\t]17:898386]C\t89\tPASS\tEVDNC=ASSMB;INSERTION=GGTAAAGCTCTGTCACCCAGGCTGGAGTGCAGCGC;MAPQ=58;MATEID=778509:1;MATENM=1;NM=2;NUMPARTS=2;SCTG=c_17_882001_907001_3C;SPAN=632;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:29:13:8.1:89.1,8.1,0:29:0:-89.12:89.12\n17\t2816636\t779292:1\tT\tT[17:2817924[\t33\tPASS\tEVDNC=ASSMB;HOMSEQ=CT;MAPQ=60;MATEID=779292:2;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_17_2817501_2842501_63C;SPAN=1288;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:11:6:3:33,3,0:11:0:-33.01:33.01\n17\t2817924\t779292:2\tC\t]17:2816636]C\t33\tPASS\tEVDNC=ASSMB;HOMSEQ=CT;MAPQ=60;MATEID=779292:1;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_17_2817501_2842501_63C;SPAN=1288;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:11:6:3:33,3,0:11:0:-33.01:33.01\n17\t6030297\t780488:1\tC\tC[17:6030604[\t36\tPASS\tEVDNC=ASSMB;HOMSEQ=CAGCCATTTTC;MAPQ=60;MATEID=780488:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_17_6027001_6052001_69C;SPAN=307;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:12:14:0.6:36.3,0.6,0:12:0:-38:38\n17\t6030604\t780488:2\tC\t]17:6030297]C\t36\tPASS\tEVDNC=ASSMB;HOMSEQ=CAGCCATTTTC;MAPQ=60;MATEID=780488:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_17_6027001_6052001_69C;SPAN=307;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:12:14:0.6:36.3,0.6,0:12:0:-38:38\n17\t8032539\t781221:1\tA\t]17:8232148]A\t32\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;INSERTION=AGTC;MAPQ=60;MATEID=781221:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_17_8232001_8257001_59C;SPAN=199609;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:16:5.6:32,0,5.6:7:9:-32.57:32.57\n17\t8232148\t781221:2\tT\tT[17:8032539[\t32\tPASS\tDISC_MAPQ=58;EVDNC=ASDIS;INSERTION=AGTC;MAPQ=60;MATEID=781221:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_17_8232001_8257001_59C;SPAN=199609;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:16:5.6:32,0,5.6:7:9:-32.57:32.57\n17\t8343327\t781263:1\tT\tT[17:8344651[\t39\tPASS\tEVDNC=ASSMB;HOMSEQ=GCTAATTTTTGTATTTTTAGTAGAGACGGGGTTT;MAPQ=60;MATEID=781263:2;MATENM=0;NM=4;NUMPARTS=2;SCTG=c_17_8330001_8355001_52C;SPAN=1324;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:13:13:3.6:39.6,3.6,0:13:0:-39.61:39.61\n17\t8344651\t781263:2\tG\t]17:8343327]G\t39\tPASS\tEVDNC=ASSMB;HOMSEQ=GCTAATTTTTGTATTTTTAGTAGAGACGGGGTTT;MAPQ=60;MATEID=781263:1;MATENM=4;NM=0;NUMPARTS=2;SCTG=c_17_8330001_8355001_52C;SPAN=1324;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:13:13:3.6:39.6,3.6,0:13:0:-39.61:39.61\n17\t10235400\t781898:2\tT\t]11:37407661]T\t33\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;MAPQ=60;MATEID=781898:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_17_10216501_10241501_78C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:11:11:3:33,3,0:9:5:-33.01:33.01\n17\t10300117\t781917:1\tA\tA[17:10300455[\t13\tPASS\tEVDNC=ASSMB;HOMSEQ=AAGATCCTGATTCA;MAPQ=60;MATEID=781917:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_17_10290001_10315001_20C;SPAN=338;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:58:13.4:13.4,0,132.2:9:0:-13.41:19.14\n17\t10300455\t781917:2\tA\t]17:10300117]A\t13\tPASS\tEVDNC=ASSMB;HOMSEQ=AAGATCCTGATTCA;MAPQ=60;MATEID=781917:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_17_10290001_10315001_20C;SPAN=338;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:58:13.4:13.4,0,132.2:9:0:-13.41:19.14\n17\t13317181\t782920:1\tT\tT[17:13317488[\t12\tPASS\tEVDNC=ASSMB;HOMSEQ=AAGGGTAAAGACAGAATCTTT;MAPQ=60;MATEID=782920:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_17_13303501_13328501_142C;SPAN=307;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:5:16:12.2:12.2,0,25.4:5:0:-12.01:12.37\n17\t13317488\t782920:2\tA\t]17:13317181]A\t12\tPASS\tEVDNC=ASSMB;HOMSEQ=AAGGGTAAAGACAGAATCTTT;MAPQ=60;MATEID=782920:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_17_13303501_13328501_142C;SPAN=307;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:5:16:12.2:12.2,0,25.4:5:0:-12.01:12.37\n17\t13628399\t783024:1\tG\tG[17:13629377[\t46\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TGTAATCCCAGCACTTTGGGAGACTGAGGCGGG;MAPQ=60;MATEID=783024:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_17_13622001_13647001_14C;SPAN=978;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:15:10:4.2:46.2,4.2,0:8:8:-46.21:46.21\n17\t13629377\t783024:2\tT\t]17:13628399]T\t46\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TGTAATCCCAGCACTTTGGGAGACTGAGGCGGG;MAPQ=60;MATEID=783024:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_17_13622001_13647001_14C;SPAN=978;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:15:10:4.2:46.2,4.2,0:8:8:-46.21:46.21\n17\t13801243\t783109:1\tT\tT[17:13801517[\t66\tPASS\tEVDNC=ASSMB;HOMSEQ=GCATATATGTATTCTT;MAPQ=60;MATEID=783109:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_17_13793501_13818501_4C;SPAN=274;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:22:12:6:66,6,0:22:0:-66.02:66.02\n17\t13801517\t783109:2\tG\t]17:13801243]G\t66\tPASS\tEVDNC=ASSMB;HOMSEQ=GCATATATGTATTCTT;MAPQ=60;MATEID=783109:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_17_13793501_13818501_4C;SPAN=274;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:22:12:6:66,6,0:22:0:-66.02:66.02\n17\t14286594\t783261:1\tA\tA[17:14288239[\t79\tPASS\tEVDNC=ASSMB;HOMSEQ=A;MAPQ=60;MATEID=783261:2;MATENM=1;NM=9;NUMPARTS=2;SCTG=c_17_14283501_14308501_0C;SPAN=1645;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:26:15:7.2:79.2,7.2,0:26:0:-79.22:79.22\n17\t14288239\t783261:2\tA\t]17:14286594]A\t79\tPASS\tEVDNC=ASSMB;HOMSEQ=A;MAPQ=60;MATEID=783261:1;MATENM=9;NM=1;NUMPARTS=2;SCTG=c_17_14283501_14308501_0C;SPAN=1645;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:26:15:7.2:79.2,7.2,0:26:0:-79.22:79.22\n17\t15886244\t783823:1\tT\tT[17:15890467[\t59\tPASS\tEVDNC=ASSMB;HOMSEQ=T;MAPQ=60;MATEID=783823:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_17_15876001_15901001_41C;SPAN=4223;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:20:19:5.4:59.4,5.4,0:20:0:-59.41:59.41\n17\t15890467\t783823:2\tT\t]17:15886244]T\t59\tPASS\tEVDNC=ASSMB;HOMSEQ=T;MAPQ=60;MATEID=783823:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_17_15876001_15901001_41C;SPAN=4223;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:20:19:5.4:59.4,5.4,0:20:0:-59.41:59.41\n17\t17252333\t784312:1\tC\t]17:17252470]C\t80\tPASS\tEVDNC=ASSMB;INSERTION=TACAGATAACGCTTTGGTGTGTGGGCTCTCCTGGGTA;MAPQ=60;MATEID=784312:2;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_17_17248001_17273001_6C;SPAN=137;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:28:41:21.5:80.9,0,21.5:28:0:-82.75:82.75\n17\t17252470\t784312:2\tG\tG[17:17252333[\t80\tPASS\tEVDNC=ASSMB;INSERTION=TACAGATAACGCTTTGGTGTGTGGGCTCTCCTGGGTA;MAPQ=60;MATEID=784312:1;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_17_17248001_17273001_6C;SPAN=137;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:28:41:21.5:80.9,0,21.5:28:0:-82.75:82.75\n17\t18887840\t784783:1\tT\tT[17:18888851[\t56\tPASS\tEVDNC=ASSMB;HOMSEQ=AACTTGTTCTTTCTT;MAPQ=60;MATEID=784783:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_17_18865001_18890001_110C;SPAN=1011;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:19:16:5.1:56.1,5.1,0:19:0:-56.11:56.11\n17\t18888851\t784783:2\tA\t]17:18887840]A\t56\tPASS\tEVDNC=ASSMB;HOMSEQ=AACTTGTTCTTTCTT;MAPQ=60;MATEID=784783:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_17_18865001_18890001_110C;SPAN=1011;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:19:16:5.1:56.1,5.1,0:19:0:-56.11:56.11\n17\t19013598\t784832:1\tT\tT]Un_KN707952v1_decoy:1383]\t46\tPASS\tEVDNC=ASSMB;HOMSEQ=CATGGGGACTGTGGAGGCT;MAPQ=60;MATEID=784832:2;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_17_19012001_19037001_17C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:16:5:4.2:46.2,4.2,0:16:0:-46.21:46.21\n17\t19640120\t784942:1\tT\tT[17:19640413[\t36\tPASS\tEVDNC=ASSMB;HOMSEQ=AATAATAAAAATGCCT;MAPQ=60;MATEID=784942:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_17_19624501_19649501_32C;SPAN=293;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:15:45:36.8:36.8,0,76.4:15:0:-36.87:37.63\n17\t19640413\t784942:2\tA\t]17:19640120]A\t36\tPASS\tEVDNC=ASSMB;HOMSEQ=AATAATAAAAATGCCT;MAPQ=60;MATEID=784942:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_17_19624501_19649501_32C;SPAN=293;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:15:45:36.8:36.8,0,76.4:15:0:-36.87:37.63\n17\t19668598\t784951:1\tT\tT[17:19669008[\t62\tPASS\tEVDNC=ASSMB;HOMSEQ=T;MAPQ=60;MATEID=784951:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_17_19649001_19674001_55C;SPAN=410;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:21:17:5.7:62.7,5.7,0:21:0:-62.72:62.72\n17\t19669008\t784951:2\tT\t]17:19668598]T\t62\tPASS\tEVDNC=ASSMB;HOMSEQ=T;MAPQ=60;MATEID=784951:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_17_19649001_19674001_55C;SPAN=410;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:21:17:5.7:62.7,5.7,0:21:0:-62.72:62.72\n17\t19919536\t785033:2\tT\t]10:132056598]T\t22\tPASS\tDISC_MAPQ=51;EVDNC=DSCRD;IMPRECISE;MAPQ=51;MATEID=785033:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=10:132056598(+)-17:19919536(-)__17_19918501_19943501D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:13:9.5:22.7,0,9.5:0:8:-23.02:23.02\n17\t21317871\t785842:1\tT\t[17:21778359[T\t42\tPASS\tDISC_MAPQ=30;EVDNC=ASDIS;HOMSEQ=T;MAPQ=36;MATEID=785842:2;MATENM=20;NM=4;NUMPARTS=2;SCTG=c_17_21756001_21781001_18C;SPAN=460488;SUBN=1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:14:17:1.2:42.9,1.2,0:12:4:-43.71:43.71\n17\t21427160\t785785:1\tA\tA[17:21713088[\t24\tPASS\tDISC_MAPQ=28;EVDNC=DSCRD;IMPRECISE;MAPQ=28;MATEID=785785:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=17:21427160(+)-17:21713088(-)__17_21707001_21732001D;SPAN=285928;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:19:21.2:24.5,0,21.2:0:9:-24.37:24.37\n17\t21713088\t785785:2\tA\t]17:21427160]A\t24\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=785785:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=17:21427160(+)-17:21713088(-)__17_21707001_21732001D;SPAN=285928;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:19:21.2:24.5,0,21.2:0:9:-24.37:24.37\n17\t21778359\t785842:2\tA\t[17:21317871[A\t42\tPASS\tDISC_MAPQ=8;EVDNC=ASDIS;HOMSEQ=T;MAPQ=24;MATEID=785842:1;MATENM=4;NM=20;NUMPARTS=2;SCTG=c_17_21756001_21781001_18C;SPAN=460488;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:14:17:1.2:42.9,1.2,0:12:4:-43.71:43.71\n17\t21814103\t785911:2\tN\t]7:63016535]N\t59\tPASS\tDISC_MAPQ=53;EVDNC=DSCRD;IMPRECISE;MAPQ=53;MATEID=785911:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:63016535(+)-17:21814103(-)__17_21805001_21830001D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:20:5:5.4:59.4,5.4,0:0:20:-59.41:59.41\n17\t21884550\t787008:1\tT\tT[17:21987760[\t31\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=ATGGAATGGAATTGAATGGAATGGAAT;MAPQ=60;MATEID=787008:2;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_17_21878501_21903501_214C;SPAN=103210;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:41:31.4:31.4,0,71:8:6:-31.39:32.26\n17\t21920248\t801378:1\tA\tA[17:26877289[\t9\tPASS\tDISC_MAPQ=29;EVDNC=DSCRD;IMPRECISE;MAPQ=29;MATEID=801378:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=17:21920248(+)-17:26877289(-)__17_26876501_26901501D;SPAN=4957041;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:83:9.8:9.8,0,197.9:0:10:-9.679:20.08\n17\t21950588\t788019:1\tT\t]17:21950746]T\t16\tPASS\tEVDNC=ASSMB;HOMSEQ=TGGAATGGA;MAPQ=60;MATEID=788019:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_17_21927501_21952501_14C;SPAN=158;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:15:118:16.4:16.4,0,280.4:15:0:-16.35:30.49\n17\t21950746\t788019:2\tA\tA[17:21950588[\t16\tPASS\tEVDNC=ASSMB;HOMSEQ=TGGAATGGA;MAPQ=60;MATEID=788019:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_17_21927501_21952501_14C;SPAN=158;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:15:118:16.4:16.4,0,280.4:15:0:-16.35:30.49\n17\t21987760\t787008:2\tA\t]17:21884550]A\t31\tPASS\tDISC_MAPQ=255;EVDNC=ASDIS;HOMSEQ=ATGGAATGGAATTGAATGGAATGGAAT;MAPQ=60;MATEID=787008:1;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_17_21878501_21903501_214C;SPAN=103210;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:41:31.4:31.4,0,71:8:6:-31.39:32.26\n17\t22877406\t788665:1\tG\t]17:23183141]G\t19\tPASS\tDISC_MAPQ=20;EVDNC=DSCRD;IMPRECISE;MAPQ=20;MATEID=788665:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=17:22877406(-)-17:23183141(+)__17_23177001_23202001D;SPAN=305735;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:25:19.4:19.4,0,42.5:0:8:-19.38:19.89\n17\t23183141\t788665:2\tC\tC[17:22877406[\t19\tPASS\tDISC_MAPQ=17;EVDNC=DSCRD;IMPRECISE;MAPQ=17;MATEID=788665:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=17:22877406(-)-17:23183141(+)__17_23177001_23202001D;SPAN=305735;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:25:19.4:19.4,0,42.5:0:8:-19.38:19.89\n17\t23483975\t789767:1\tA\t]17:23484332]A\t99\tPASS\tDISC_MAPQ=19;EVDNC=ASDIS;HOMSEQ=AGAAGCCTTCTCAGAAA;MAPQ=13;MATEID=789767:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_17_23471001_23496001_74C;SPAN=357;SUBN=2;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:36:12:9.9:108.9,9.9,0:30:8:-108.9:108.9\n17\t23484332\t789767:2\tA\tA[17:23483975[\t99\tPASS\tDISC_MAPQ=16;EVDNC=ASDIS;HOMSEQ=AGAAGCCTTCTCAGAAA;MAPQ=39;MATEID=789767:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_17_23471001_23496001_74C;SPAN=357;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:36:12:9.9:108.9,9.9,0:30:8:-108.9:108.9\n17\t24946097\t793752:1\tA\t]17:24946925]A\t26\tPASS\tDISC_MAPQ=22;EVDNC=DSCRD;IMPRECISE;MAPQ=22;MATEID=793752:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=17:24946097(-)-17:24946925(+)__17_24941001_24966001D;SPAN=828;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:9:6:2.4:26.4,2.4,0:0:9:-26.41:26.41\n17\t24946925\t793752:2\tT\tT[17:24946097[\t26\tPASS\tDISC_MAPQ=19;EVDNC=DSCRD;IMPRECISE;MAPQ=19;MATEID=793752:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=17:24946097(-)-17:24946925(+)__17_24941001_24966001D;SPAN=828;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:9:6:2.4:26.4,2.4,0:0:9:-26.41:26.41\n17\t25237545\t794573:1\tG\t]17:26590930]G\t23\tPASS\tDISC_MAPQ=47;EVDNC=DSCRD;IMPRECISE;MAPQ=47;MATEID=794573:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=17:25237545(-)-17:26590930(+)__17_25235001_25260001D;SPAN=1353385;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:8:6:2.1:23.1,2.1,0:0:8:-23.11:23.11\n17\t25539213\t796561:1\tA\t]17:25539559]A\t99\tPASS\tDISC_MAPQ=255;EVDNC=TSI_L;HOMSEQ=AGCATTC;MAPQ=60;MATEID=796561:2;MATENM=0;NM=0;NUMPARTS=3;SCTG=c_17_25872001_25897001_85C;SPAN=346;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:40:0:11.1:122.1,11.1,0:40:0:-122.1:122.1\n17\t25539559\t796561:2\tC\tC[17:25539213[\t99\tPASS\tDISC_MAPQ=255;EVDNC=TSI_L;HOMSEQ=AGCATTC;MAPQ=28;MATEID=796561:1;MATENM=0;NM=0;NUMPARTS=3;SCTG=c_17_25872001_25897001_85C;SPAN=346;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:40:0:11.1:122.1,11.1,0:40:0:-122.1:122.1\n17\t25637287\t795758:1\tA\t]17:25637632]A\t99\tPASS\tDISC_MAPQ=2;EVDNC=ASDIS;HOMSEQ=AGCATTC;MAPQ=19;MATEID=795758:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_17_25627001_25652001_95C;SPAN=345;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:63:80:14:185.6,0,14:60:3:-193.9:193.9\n17\t25637632\t795758:2\tC\tC[17:25637287[\t99\tPASS\tDISC_MAPQ=21;EVDNC=ASDIS;HOMSEQ=AGCATTC;MAPQ=40;MATEID=795758:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_17_25627001_25652001_95C;SPAN=345;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:63:80:14:185.6,0,14:60:3:-193.9:193.9\n17\t26256377\t798613:1\tA\tA[17:26476143[\t29\tPASS\tDISC_MAPQ=15;EVDNC=DSCRD;IMPRECISE;MAPQ=15;MATEID=798613:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=17:26256377(+)-17:26476143(-)__17_26460001_26485001D;SPAN=219766;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:10:3:2.7:29.7,2.7,0:0:10:-29.71:29.71\n17\t26476143\t798613:2\tG\t]17:26256377]G\t29\tPASS\tDISC_MAPQ=18;EVDNC=DSCRD;IMPRECISE;MAPQ=18;MATEID=798613:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=17:26256377(+)-17:26476143(-)__17_26460001_26485001D;SPAN=219766;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:10:3:2.7:29.7,2.7,0:0:10:-29.71:29.71\n17\t26590930\t794573:2\tA\tA[17:25237545[\t23\tPASS\tDISC_MAPQ=28;EVDNC=DSCRD;IMPRECISE;MAPQ=28;MATEID=794573:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=17:25237545(-)-17:26590930(+)__17_25235001_25260001D;SPAN=1353385;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:8:6:2.1:23.1,2.1,0:0:8:-23.11:23.11\n17\t26640334\t798950:1\tT\tT[17:26640621[\t89\tPASS\tDISC_MAPQ=255;EVDNC=TSI_L;INSERTION=GTAGAATCTGCAGGTGGACATTTGGGGCGCTTTGAGGCCAATGGAGAAAAAGGAAATCTCTTCACGTAAAAGCTATACAGAAGCATTCTCAGAAACTTCTTTGTGATATGTGCATTCAACTCACAGAATTGAACATTTTTTTTCATAGAGCAGATTTGAAACACTCTGTTGAATTTGCAAGTGGATATTTGGACGGCTTAGAGGCCTTTGTTGGAAACAAGGTATCTTCACATAAAAGCTAGACAGAAGCATTCTCAGAAGCTACTTTGTGATGTGTGCATTCAACTCACAGAGTTGAACCTTTCTTTTGATAGG;MAPQ=60;MATEID=798950:2;MATENM=0;NM=0;NUMPARTS=5;REPSEQ=TTTTT;SCTG=c_17_26631501_26656501_88C;SPAN=287;SUBN=3;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:33:6:9:89.9,9,0:33:0:-89.99:89.99\n17\t26640621\t798950:2\tA\t]17:26640334]A\t89\tPASS\tDISC_MAPQ=255;EVDNC=TSI_L;INSERTION=GTAGAATCTGCAGGTGGACATTTGGGGCGCTTTGAGGCCAATGGAGAAAAAGGAAATCTCTTCACGTAAAAGCTATACAGAAGCATTCTCAGAAACTTCTTTGTGATATGTGCATTCAACTCACAGAATTGAACATTTTTTTTCATAGAGCAGATTTGAAACACTCTGTTGAATTTGCAAGTGGATATTTGGACGGCTTAGAGGCCTTTGTTGGAAACAAGGTATCTTCACATAAAAGCTAGACAGAAGCATTCTCAGAAGCTACTTTGTGATGTGTGCATTCAACTCACAGAGTTGAACCTTTCTTTTGATAGG;MAPQ=60;MATEID=798950:1;MATENM=0;NM=0;NUMPARTS=5;REPSEQ=TTTTT;SCTG=c_17_26631501_26656501_88C;SPAN=287;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:33:6:9:89.9,9,0:33:0:-89.99:89.99\n17\t26657609\t798974:1\tA\tA[17:26683650[\t34\tPASS\tDISC_MAPQ=1;EVDNC=ASDIS;HOMSEQ=ACAGAAGCATTCTCAGAAACTTATTTGTGATGTGTGCATTCAACTCACAGAGTTGAACATTTCTTTTGACAGAGAAGTTTTGAAA;MAPQ=10;MATEID=798974:2;MATENM=6;NM=8;NUMPARTS=2;SCTG=c_17_26656001_26681001_40C;SPAN=26041;SUBN=1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:20:14.3:34.1,0,14.3:8:4:-34.32:34.32\n17\t26683650\t798974:2\tA\t]17:26657609]A\t34\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=ACAGAAGCATTCTCAGAAACTTATTTGTGATGTGTGCATTCAACTCACAGAGTTGAACATTTCTTTTGACAGAGAAGTTTTGAAA;MAPQ=60;MATEID=798974:1;MATENM=8;NM=6;NUMPARTS=2;SCTG=c_17_26656001_26681001_40C;SPAN=26041;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:20:14.3:34.1,0,14.3:8:4:-34.32:34.32\n17\t26701545\t798997:1\tA\t]17:26702093]A\t50\tPASS\tDISC_MAPQ=58;EVDNC=ASDIS;HOMSEQ=ATAGAGCAGTTTTGAAACACTCTTTTTGTAGAATCTG;MAPQ=60;MATEID=798997:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_17_26680501_26705501_20C;SPAN=548;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:18:30:24.5:50.9,0,24.5:9:16:-51.49:51.49\n17\t26702093\t798997:2\tG\tG[17:26701545[\t50\tPASS\tDISC_MAPQ=53;EVDNC=ASDIS;HOMSEQ=ATAGAGCAGTTTTGAAACACTCTTTTTGTAGAATCTG;MAPQ=60;MATEID=798997:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_17_26680501_26705501_20C;SPAN=548;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:18:30:24.5:50.9,0,24.5:9:16:-51.49:51.49\n17\t26843013\t800758:1\tA\tA[17:26846576[\t37\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=GAATGGAATGGACTCGAATGGAATGGACTGGAA;MAPQ=60;MATEID=800758:2;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_17_26827501_26852501_447C;SPAN=3563;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:19:89:37.7:37.7,0,186.2:8:16:-37.7:43.33\n17\t26846576\t800758:2\tG\t]17:26843013]G\t37\tPASS\tDISC_MAPQ=55;EVDNC=ASDIS;HOMSEQ=GAATGGAATGGACTCGAATGGAATGGACTGGAA;MAPQ=60;MATEID=800758:1;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_17_26827501_26852501_447C;SPAN=3563;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:19:89:37.7:37.7,0,186.2:8:16:-37.7:43.33\n17\t26877289\t801378:2\tA\t]17:21920248]A\t9\tPASS\tDISC_MAPQ=21;EVDNC=DSCRD;IMPRECISE;MAPQ=21;MATEID=801378:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=17:21920248(+)-17:26877289(-)__17_26876501_26901501D;SPAN=4957041;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:83:9.8:9.8,0,197.9:0:10:-9.679:20.08\n17\t27155352\t801818:1\tT\t]17:27164868]T\t34\tPASS\tDISC_MAPQ=52;EVDNC=ASDIS;HOMSEQ=TTTG;MAPQ=60;MATEID=801818:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_17_27146001_27171001_15C;SPAN=9516;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:20:14.3:34.1,0,14.3:7:8:-34.32:34.32\n17\t27164868\t801818:2\tG\tG[17:27155352[\t34\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TTTG;MAPQ=60;MATEID=801818:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_17_27146001_27171001_15C;SPAN=9516;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:20:14.3:34.1,0,14.3:7:8:-34.32:34.32\n17\t29271810\t802159:1\tC\t]17:29456121]C\t20\tPASS\tDISC_MAPQ=51;EVDNC=ASDIS;HOMSEQ=CCTGTAATCCCAGCACTTTGGGAGGCCAAGGCAGG;MAPQ=60;MATEID=802159:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_17_29449001_29474001_4C;SPAN=184311;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:7:11:6.8:20,0,6.8:6:4:-20.32:20.32\n17\t29456121\t802159:2\tG\tG[17:29271810[\t20\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=CCTGTAATCCCAGCACTTTGGGAGGCCAAGGCAGG;MAPQ=60;MATEID=802159:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_17_29449001_29474001_4C;SPAN=184311;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:7:11:6.8:20,0,6.8:6:4:-20.32:20.32\n17\t33736830\t802912:2\tG\t[1:88507126[G\t49\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=802912:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:88507126(-)-17:33736830(-)__17_33736501_33761501D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:17:12:4.5:49.5,4.5,0:0:17:-49.51:49.51\n17\t33737644\t802914:2\tC\tC]1:88507142]\t52\tPASS\tEVDNC=ASSMB;INSERTION=G;MAPQ=60;MATEID=802914:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_17_33736501_33761501_18C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:18:10:4.8:52.8,4.8,0:18:0:-52.81:52.81\n17\t34545962\t803094:1\tA\tA[17:34547600[\t46\tPASS\tEVDNC=ASSMB;INSERTION=CTT;MAPQ=60;MATEID=803094:2;MATENM=0;NM=5;NUMPARTS=2;SCTG=c_17_34545001_34570001_0C;SPAN=1638;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:16:7:4.2:46.2,4.2,0:16:0:-46.21:46.21\n17\t34547600\t803094:2\tG\t]17:34545962]G\t46\tPASS\tEVDNC=ASSMB;INSERTION=CTT;MAPQ=60;MATEID=803094:1;MATENM=5;NM=0;NUMPARTS=2;SCTG=c_17_34545001_34570001_0C;SPAN=1638;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:16:7:4.2:46.2,4.2,0:16:0:-46.21:46.21\n17\t34977737\t815353:1\tG\t]17:74777739]G\t40\tPASS\tDISC_MAPQ=255;EVDNC=TSI_L;HOMSEQ=GGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCTGAAGCGGGCAGATCACCTGAGGTCAGGAGTTCAAGACCAGCTTGGCCAACATGGCGAAACCCCGTCTCTACTAACAATATAAAAAAATTATCCAGGCGTGGTGGTGGGCACCTG;INSERTION=C;MAPQ=60;MATEID=815353:2;MATENM=1;NM=0;NUMPARTS=3;REPSEQ=AAA;SCTG=c_17_74774001_74799001_8C;SPAN=39800002;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:20:7.7:40.7,0,7.7:11:12:-41.65:41.65\n17\t36446655\t803455:1\tA\tA[17:36459258[\t33\tPASS\tDISC_MAPQ=32;EVDNC=DSCRD;IMPRECISE;MAPQ=32;MATEID=803455:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=17:36446655(+)-17:36459258(-)__17_36456001_36481001D;SPAN=12603;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:11:5:3:33,3,0:0:11:-33.01:33.01\n17\t36459258\t803455:2\tT\t]17:36446655]T\t33\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=803455:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=17:36446655(+)-17:36459258(-)__17_36456001_36481001D;SPAN=12603;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:11:5:3:33,3,0:0:11:-33.01:33.01\n17\t39616248\t803979:1\tA\t]17:39786889]A\t28\tPASS\tEVDNC=ASSMB;HOMSEQ=AG;MAPQ=60;MATEID=803979:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_17_39763501_39788501_24C;SPAN=170641;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:18:14.9:28.1,0,14.9:10:0:-28.08:28.08\n17\t39729080\t804185:1\tC\t]17:40691183]C\t42\tPASS\tEVDNC=ASSMB;INSERTION=A;MAPQ=60;MATEID=804185:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_17_40670001_40695001_8C;SPAN=962103;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:14:13:3.9:42.9,3.9,0:14:0:-42.91:42.91\n17\t39786889\t803979:2\tG\tG[17:39616248[\t28\tPASS\tEVDNC=ASSMB;HOMSEQ=AG;MAPQ=60;MATEID=803979:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_17_39763501_39788501_24C;SPAN=170641;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:18:14.9:28.1,0,14.9:10:0:-28.08:28.08\n17\t40691183\t804185:2\tT\tT[17:39729080[\t42\tPASS\tEVDNC=ASSMB;INSERTION=A;MAPQ=60;MATEID=804185:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_17_40670001_40695001_8C;SPAN=962103;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:14:13:3.9:42.9,3.9,0:14:0:-42.91:42.91\n17\t44048921\t805051:2\tG\t[1:188086594[G\t49\tPASS\tDISC_MAPQ=55;EVDNC=ASDIS;INSERTION=AGC;MAPQ=60;MATEID=805051:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_17_44026501_44051501_18C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:17:15:4.5:49.5,4.5,0:13:9:-49.51:49.51\n17\t44198003\t805152:1\tC\t]17:44358211]C\t49\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=CGTGGGG;MAPQ=60;MATEID=805152:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_17_44345001_44370001_15C;SPAN=160208;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:15:17:4.5:49.5,4.5,0:12:5:-48.04:48.04\n17\t44358211\t805152:2\tG\tG[17:44198003[\t49\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=CGTGGGG;MAPQ=60;MATEID=805152:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_17_44345001_44370001_15C;SPAN=160208;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:15:17:4.5:49.5,4.5,0:12:5:-48.04:48.04\n17\t45488644\t934007:1\tT\t]X:68328802]T\t52\tPASS\tDISC_MAPQ=41;EVDNC=DSCRD;IMPRECISE;MAPQ=41;MATEID=934007:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=17:45488644(-)-23:68328802(+)__23_68306001_68331001D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:18:16:4.8:52.8,4.8,0:0:18:-52.81:52.81\n17\t47670040\t805985:1\tA\t]20:53866284]A\t23\tPASS\tEVDNC=ASSMB;HOMSEQ=ACA;MAPQ=60;MATEID=805985:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_17_47652501_47677501_38C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:21:23.9:23.9,0,27.2:9:0:-23.81:23.84\n17\t48538270\t806286:1\tG\t]17:48539858]G\t85\tPASS\tDISC_MAPQ=42;EVDNC=ASDIS;HOMSEQ=GGA;MAPQ=60;MATEID=806286:2;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_17_48534501_48559501_6C;SPAN=1588;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:29:36:3.2:85.7,0,3.2:17:17:-89.88:89.88\n17\t48538441\t806287:1\tG\tG[17:48539859[\t99\tPASS\tEVDNC=ASSMB;HOMSEQ=AAG;MAPQ=60;MATEID=806287:2;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_17_48534501_48559501_8C;SPAN=1418;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:37:37:10.2:112.2,10.2,0:37:0:-112.2:112.2\n17\t48539858\t806286:2\tA\tA[17:48538270[\t85\tPASS\tDISC_MAPQ=55;EVDNC=ASDIS;HOMSEQ=GGA;MAPQ=60;MATEID=806286:1;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_17_48534501_48559501_6C;SPAN=1588;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:29:36:3.2:85.7,0,3.2:17:17:-89.88:89.88\n17\t48539859\t806287:2\tA\t]17:48538441]A\t99\tPASS\tEVDNC=ASSMB;HOMSEQ=AAG;MAPQ=60;MATEID=806287:1;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_17_48534501_48559501_8C;SPAN=1418;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:37:37:10.2:112.2,10.2,0:37:0:-112.2:112.2\n17\t48813086\t887898:1\tA\t[20:59473634[A\t13\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AG;MAPQ=60;MATEID=887898:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_59461501_59486501_31C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:48:13.1:13.1,0,105.5:4:6:-12.92:17.28\n17\t49274477\t806552:1\tA\tA[17:49275757[\t18\tPASS\tDISC_MAPQ=52;EVDNC=DSCRD;IMPRECISE;MAPQ=52;MATEID=806552:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=17:49274477(+)-17:49275757(-)__17_49269501_49294501D;SPAN=1280;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:28:18.5:18.5,0,51.5:0:8:-18.54:19.42\n17\t49275757\t806552:2\tT\t]17:49274477]T\t18\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=806552:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=17:49274477(+)-17:49275757(-)__17_49269501_49294501D;SPAN=1280;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:28:18.5:18.5,0,51.5:0:8:-18.54:19.42\n17\t50673981\t930954:1\tT\tT]X:46827692]\t29\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCT;MAPQ=60;MATEID=930954:2;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_23_46819501_46844501_18C;SPAN=-1;SUBN=1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:10:10:2.7:29.7,2.7,0:3:7:-29.71:29.71\n17\t50783035\t807096:1\tC\t]17:51292796]C\t32\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=C;MAPQ=60;MATEID=807096:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_17_51278501_51303501_12C;SPAN=509761;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:26:32.3:32.3,0,32.3:9:9:-32.3:32.3\n17\t51221496\t807098:1\tC\t]17:51300764]C\t50\tPASS\tEVDNC=ASSMB;HOMSEQ=CAAA;MAPQ=60;MATEID=807098:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_17_51278501_51303501_97C;SPAN=79268;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:17:21:0.8:50.3,0,0.8:17:0:-52.77:52.77\n17\t51292796\t807096:2\tC\tC[17:50783035[\t32\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=C;MAPQ=60;MATEID=807096:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_17_51278501_51303501_12C;SPAN=509761;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:26:32.3:32.3,0,32.3:9:9:-32.3:32.3\n17\t51300764\t807098:2\tA\tA[17:51221496[\t50\tPASS\tEVDNC=ASSMB;HOMSEQ=CAAA;MAPQ=60;MATEID=807098:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_17_51278501_51303501_97C;SPAN=79268;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:17:21:0.8:50.3,0,0.8:17:0:-52.77:52.77\n17\t51419125\t807186:1\tA\t]17:51459549]A\t31\tPASS\tEVDNC=ASSMB;HOMSEQ=AC;MAPQ=60;MATEID=807186:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_17_51450001_51475001_71C;SPAN=40424;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:31:31.1:31.1,0,44.3:12:0:-30.9:31.08\n17\t51459549\t807186:2\tC\tC[17:51419125[\t31\tPASS\tEVDNC=ASSMB;HOMSEQ=AC;MAPQ=60;MATEID=807186:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_17_51450001_51475001_71C;SPAN=40424;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:31:31.1:31.1,0,44.3:12:0:-30.9:31.08\n17\t52598598\t995132:1\tA\t]Un_JTFH01000033v1_decoy:5897]A\t95\tPASS\tEVDNC=ASSMB;HOMSEQ=AGGC;MAPQ=60;MATEID=995132:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_876_1_5898_0C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:32:9:8.7:95.7,8.7,0:32:0:-95.72:95.72\n17\t52598606\t807511:1\tG\tG]X:49142499]\t29\tPASS\tDISC_MAPQ=54;EVDNC=DSCRD;IMPRECISE;MAPQ=54;MATEID=807511:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=17:52598606(+)-23:49142499(+)__17_52577001_52602001D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:25:29.3:29.3,0,32.6:0:11:-29.28:29.3\n17\t53110849\t807783:1\tC\tC[17:53111170[\t18\tPASS\tEVDNC=ASSMB;INSERTION=ATAATTATGAT;MAPQ=60;MATEID=807783:2;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_17_53091501_53116501_23C;SPAN=321;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:40:18.5:18.5,0,81.2:9:0:-18.47:20.76\n17\t53111170\t807783:2\tT\t]17:53110849]T\t18\tPASS\tEVDNC=ASSMB;INSERTION=ATAATTATGAT;MAPQ=60;MATEID=807783:1;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_17_53091501_53116501_23C;SPAN=321;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:40:18.5:18.5,0,81.2:9:0:-18.47:20.76\n17\t53111341\t807773:2\tT\t[16:6222194[T\t55\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=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591001_45C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:74:124:99:209.6,0,100.7:41:53:-211.4:211.4\n17\t62018502\t810629:1\tC\tC[17:62110864[\t99\tPASS\tEVDNC=ASSMB;HOMSEQ=C;MAPQ=60;MATEID=810629:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_17_62107501_62132501_14C;SPAN=92362;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:62:179:99:154.4,0,296.3:62:0:-154.3:156.8\n17\t62110864\t810629:2\tC\t]17:62018502]C\t99\tPASS\tEVDNC=ASSMB;HOMSEQ=C;MAPQ=60;MATEID=810629:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_17_62107501_62132501_14C;SPAN=92362;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:62:179:99:154.4,0,296.3:62:0:-154.3:156.8\n17\t62135637\t811105:1\tG\t[17:62961840[G\t99\tPASS\tDISC_MAPQ=255;EVDNC=ASDIS;HOMSEQ=C;MAPQ=60;MATEID=811105:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_17_62940501_62965501_5C;SPAN=826203;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:104:168:99:296.3,0,124.7:69:73:-299.8:299.8\n17\t62660892\t810968:1\tA\tA]20:61529111]\t60\tPASS\tDISC_MAPQ=57;EVDNC=DSCRD;IMPRECISE;MAPQ=57;MATEID=810968:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=17:62660892(+)-20:61529111(+)__17_62646501_62671501D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:21:32:17.6:60.5,0,17.6:0:21:-61.42:61.42\n17\t62812070\t889980:1\tT\t]20:63870915]T\t12\tPASS\tDISC_MAPQ=255;EVDNC=ASDIS;INSERTION=GTGTG;MAPQ=60;MATEID=889980:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_63847001_63872001_38C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:5:14:12.5:12.5,0,22.4:2:4:-12.57:12.73\n17\t62961840\t811105:2\tC\t[17:62135637[C\t99\tPASS\tDISC_MAPQ=57;EVDNC=ASDIS;HOMSEQ=C;MAPQ=60;MATEID=811105:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_17_62940501_62965501_5C;SPAN=826203;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:104:168:99:296.3,0,124.7:69:73:-299.8:299.8\n17\t62965942\t886924:1\tC\tC[20:57100409[\t99\tPASS\tEVDNC=ASSMB;HOMSEQ=CC;MAPQ=60;MATEID=886924:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_20_57085001_57110001_84C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:48:156:99:114.8,0,276.5:48:0:-114.6:118.4\n17\t63001506\t889876:1\tT\t[20:63664882[T\t99\tPASS\tDISC_MAPQ=255;EVDNC=ASDIS;HOMSEQ=GA;MAPQ=60;MATEID=889876:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_63651001_63676001_8C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:52:64:5.3:153.8,0,5.3:36:18:-161.6:161.6\n17\t63002553\t882810:1\tA\tA[20:47156833[\t99\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=882810:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_47138001_47163001_67C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:71:137:99:196.1,0,146.6:71:0:-196.2:196.2\n17\t63093446\t811194:1\tG\tG]17:63101678]\t50\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=811194:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=17:63093446(+)-17:63101678(+)__17_63087501_63112501D;SPAN=8232;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:22:80:50.3:50.3,0,149.3:0:22:-50.14:52.96\n17\t63101678\t811194:2\tA\tA]17:63093446]\t50\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=811194:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=17:63093446(+)-17:63101678(+)__17_63087501_63112501D;SPAN=8232;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:22:80:50.3:50.3,0,149.3:0:22:-50.14:52.96\n17\t63842219\t811520:1\tC\t]17:63878730]C\t36\tPASS\tDISC_MAPQ=51;EVDNC=ASDIS;HOMSEQ=CTG;MAPQ=60;MATEID=811520:2;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_17_63871501_63896501_153C;SPAN=36511;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:35:36.5:36.5,0,49.7:11:12:-36.38:36.52\n17\t63863783\t811504:1\tG\tG[17:63887370[\t15\tPASS\tDISC_MAPQ=53;EVDNC=DSCRD;IMPRECISE;MAPQ=53;MATEID=811504:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=17:63863783(+)-17:63887370(-)__17_63847001_63872001D;SPAN=23587;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:38:15.8:15.8,0,78.5:0:8:-15.73:18.19\n17\t63878730\t811520:2\tG\tG[17:63842219[\t36\tPASS\tDISC_MAPQ=32;EVDNC=ASDIS;HOMSEQ=CTG;MAPQ=27;MATEID=811520:1;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_17_63871501_63896501_153C;SPAN=36511;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:35:36.5:36.5,0,49.7:11:12:-36.38:36.52\n17\t63887370\t811504:2\tC\t]17:63863783]C\t15\tPASS\tDISC_MAPQ=52;EVDNC=DSCRD;IMPRECISE;MAPQ=52;MATEID=811504:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=17:63863783(+)-17:63887370(-)__17_63847001_63872001D;SPAN=23587;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:38:15.8:15.8,0,78.5:0:8:-15.73:18.19\n17\t64135849\t811613:1\tC\tC[17:64136778[\t95\tPASS\tDISC_MAPQ=58;EVDNC=ASDIS;HOMSEQ=GAGGTCAGGAGTTCGAGACCAGCCTGGCCAACATGGTGAAACCC;MAPQ=60;MATEID=811613:2;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_17_64116501_64141501_14C;SPAN=929;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:32:16:8.7:95.7,8.7,0:15:21:-95.72:95.72\n17\t64136778\t811613:2\tG\t]17:64135849]G\t95\tPASS\tDISC_MAPQ=59;EVDNC=ASDIS;HOMSEQ=GAGGTCAGGAGTTCGAGACCAGCCTGGCCAACATGGTGAAACCC;MAPQ=60;MATEID=811613:1;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_17_64116501_64141501_14C;SPAN=929;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:32:16:8.7:95.7,8.7,0:15:21:-95.72:95.72\n17\t64310797\t811695:1\tG\t]20:54940897]G\t99\tPASS\tDISC_MAPQ=255;EVDNC=TSI_G;INSERTION=CAACAAATGTTTATTGAGTTTATACTATAAACCTTCTCCTCTTTCCTTTGCTGACTCTCTGCCTGGAACT;MAPQ=60;MATEID=811695:2;MATENM=0;NM=0;NUMPARTS=3;SCTG=c_17_64288001_64313001_4C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:118:103:33:363,33,0:118:0:-363.1:363.1\n17\t65276006\t811993:1\tT\tT[17:65276255[\t66\tPASS\tDISC_MAPQ=59;EVDNC=ASDIS;HOMSEQ=GCCTCGGCCTCCCAAAGTGCTGGGATTACCGGCATGAGCCACCGCACCCGGCCTATAGCAGCATTATTCTT;MAPQ=60;MATEID=811993:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_17_65268001_65293001_24C;SPAN=249;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:22:16:6:66,6,0:12:13:-66.02:66.02\n17\t65276255\t811993:2\tG\t]17:65276006]G\t66\tPASS\tDISC_MAPQ=58;EVDNC=ASDIS;HOMSEQ=GCCTCGGCCTCCCAAAGTGCTGGGATTACCGGCATGAGCCACCGCACCCGGCCTATAGCAGCATTATTCTT;MAPQ=60;MATEID=811993:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_17_65268001_65293001_24C;SPAN=249;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:22:16:6:66,6,0:12:13:-66.02:66.02\n17\t65499944\t812061:1\tG\t]17:65500418]G\t35\tPASS\tDISC_MAPQ=48;EVDNC=DSCRD;IMPRECISE;MAPQ=48;MATEID=812061:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=17:65499944(-)-17:65500418(+)__17_65488501_65513501D;SPAN=474;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:16:62:35.6:35.6,0,118.1:0:16:-35.39:38\n17\t65500418\t812061:2\tA\tA[17:65499944[\t35\tPASS\tDISC_MAPQ=26;EVDNC=DSCRD;IMPRECISE;MAPQ=26;MATEID=812061:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=17:65499944(-)-17:65500418(+)__17_65488501_65513501D;SPAN=474;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:16:62:35.6:35.6,0,118.1:0:16:-35.39:38\n17\t66203075\t812369:1\tA\t]17:66215365]A\t19\tPASS\tDISC_MAPQ=52;EVDNC=ASDIS;HOMSEQ=A;MAPQ=60;MATEID=812369:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_17_66199001_66224001_105C;SPAN=12290;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:48:19.7:19.7,0,98.9:8:7:-19.52:22.68\n17\t66215365\t812369:2\tA\tA[17:66203075[\t19\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=A;MAPQ=60;MATEID=812369:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_17_66199001_66224001_105C;SPAN=12290;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:48:19.7:19.7,0,98.9:8:7:-19.52:22.68\n17\t66268939\t812410:1\tG\tG[17:66269997[\t99\tPASS\tEVDNC=ASSMB;HOMSEQ=AAAAAATGTTTTAAG;MAPQ=60;MATEID=812410:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_17_66248001_66273001_0C;SPAN=1058;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:32:36:6.6:102.3,6.6,0:32:0:-102.8:102.8\n17\t66269997\t812410:2\tA\t]17:66268939]A\t99\tPASS\tEVDNC=ASSMB;HOMSEQ=AAAAAATGTTTTAAG;MAPQ=60;MATEID=812410:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_17_66248001_66273001_0C;SPAN=1058;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:32:36:6.6:102.3,6.6,0:32:0:-102.8:102.8\n17\t66641155\t812584:2\tT\t]6:13191316]T\t40\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=812584:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=6:13191316(+)-17:66641155(-)__17_66640001_66665001D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:15:34:40.1:40.1,0,43.4:0:15:-39.96:39.98\n17\t68005944\t813236:2\tG\tG[16:24412394[\t49\tPASS\tDISC_MAPQ=56;EVDNC=DSCRD;IMPRECISE;MAPQ=56;MATEID=813236:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=16:24412394(-)-17:68005944(+)__17_67987501_68012501D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:17:17:4.5:49.5,4.5,0:0:17:-49.51:49.51\n17\t69091525\t813744:1\tT\tT[17:69091822[\t99\tPASS\tEVDNC=ASSMB;HOMSEQ=CCAAATAGACTTCTT;MAPQ=60;MATEID=813744:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_17_69090001_69115001_19C;SPAN=297;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:38:43:5.4:118.8,5.4,0:38:0:-121.8:121.8\n17\t69091822\t813744:2\tC\t]17:69091525]C\t99\tPASS\tEVDNC=ASSMB;HOMSEQ=CCAAATAGACTTCTT;MAPQ=60;MATEID=813744:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_17_69090001_69115001_19C;SPAN=297;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:38:43:5.4:118.8,5.4,0:38:0:-121.8:121.8\n17\t69309485\t887352:1\tA\t]20:58273305]A\t15\tPASS\tEVDNC=ASSMB;INSERTION=TA;MAPQ=60;MATEID=887352:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_58261001_58286001_61C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:50:15.8:15.8,0,108.2:9:0:-15.65:19.78\n17\t69341591\t813847:1\tC\tC]17:75821480]\t62\tPASS\tDISC_MAPQ=51;EVDNC=DSCRD;IMPRECISE;MAPQ=51;MATEID=813847:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=17:69341591(+)-17:75821480(+)__17_69335001_69360001D;SPAN=6479889;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:21:16:5.7:62.7,5.7,0:0:21:-62.72:62.72\n17\t72085980\t814650:1\tG\t]17:72298446]G\t75\tPASS\tDISC_MAPQ=56;EVDNC=ASDIS;HOMSEQ=GTG;MAPQ=41;MATEID=814650:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_17_72275001_72300001_17C;SPAN=212466;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:25:25:6.9:75.9,6.9,0:9:24:-75.92:75.92\n17\t72298446\t814650:2\tG\tG[17:72085980[\t75\tPASS\tDISC_MAPQ=58;EVDNC=ASDIS;HOMSEQ=GTG;MAPQ=60;MATEID=814650:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_17_72275001_72300001_17C;SPAN=212466;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:25:25:6.9:75.9,6.9,0:9:24:-75.92:75.92\n17\t72685322\t814760:1\tT\t]17:72685450]T\t82\tPASS\tEVDNC=ASSMB;HOMSEQ=TT;MAPQ=60;MATEID=814760:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_17_72667001_72692001_1C;SPAN=128;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:29:49:39.2:82.1,0,39.2:29:0:-82.67:82.67\n17\t72685450\t814760:2\tT\tT[17:72685322[\t82\tPASS\tEVDNC=ASSMB;HOMSEQ=TT;MAPQ=60;MATEID=814760:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_17_72667001_72692001_1C;SPAN=128;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:29:49:39.2:82.1,0,39.2:29:0:-82.67:82.67\n17\t72701864\t814770:1\tG\t]17:72702013]G\t43\tPASS\tEVDNC=ASSMB;HOMSEQ=GCTGAGGTGG;MAPQ=60;MATEID=814770:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_17_72691501_72716501_15C;SPAN=149;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:16:35:43.1:43.1,0,43.1:16:0:-42.98:42.98\n17\t72702013\t814770:2\tG\tG[17:72701864[\t43\tPASS\tEVDNC=ASSMB;HOMSEQ=GCTGAGGTGG;MAPQ=60;MATEID=814770:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_17_72691501_72716501_15C;SPAN=149;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:16:35:43.1:43.1,0,43.1:16:0:-42.98:42.98\n17\t72819091\t814807:1\tC\tC[17:72825222[\t56\tPASS\tEVDNC=ASSMB;HOMSEQ=TCC;MAPQ=60;MATEID=814807:2;MATENM=4;NM=3;NUMPARTS=2;SCTG=c_17_72814001_72839001_4C;SPAN=6131;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:19:11:5.1:56.1,5.1,0:19:0:-56.11:56.11\n17\t72825222\t814807:2\tT\t]17:72819091]T\t56\tPASS\tEVDNC=ASSMB;HOMSEQ=TCC;MAPQ=60;MATEID=814807:1;MATENM=3;NM=4;NUMPARTS=2;SCTG=c_17_72814001_72839001_4C;SPAN=6131;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:19:11:5.1:56.1,5.1,0:19:0:-56.11:56.11\n17\t72880967\t814830:1\tC\tC[Un_KN707893v1_decoy:1[\t49\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=814830:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_17_72863001_72888001_3C;SPAN=-1;SUBN=1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:15:17:4.5:49.5,4.5,0:15:0:-48.04:48.04\n17\t72880967\t991392:1\tC\tC[Un_KN707893v1_decoy:1[\t52\tPASS\tDISC_MAPQ=255;EVDNC=TSI_L;MAPQ=60;MATEID=991392:2;MATENM=0;NM=0;NUMPARTS=5;REPSEQ=CC;SCTG=c_744_1_8049_5C;SPAN=-1;SUBN=9;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:18:6:4.8:52.8,4.8,0:18:0:-52.81:52.81\n17\t74777739\t815353:2\tG\tG[17:34977737[\t40\tPASS\tDISC_MAPQ=0;EVDNC=TSI_L;HOMSEQ=GGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCTGAAGCGGGCAGATCACCTGAGGTCAGGAGTTCAAGACCAGCTTGGCCAACATGGCGAAACCCCGTCTCTACTAACAATATAAAAAAATTATCCAGGCGTGGTGGTGGGCACCTG;INSERTION=C;MAPQ=25;MATEID=815353:1;MATENM=0;NM=1;NUMPARTS=3;REPSEQ=AAA;SCTG=c_17_74774001_74799001_8C;SPAN=39800002;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:20:7.7:40.7,0,7.7:11:12:-41.65:41.65\n17\t75259894\t815709:1\tA\t]17:75528391]A\t26\tPASS\tEVDNC=ASSMB;HOMSEQ=A;MAPQ=60;MATEID=815709:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_17_75509001_75534001_14C;SPAN=268497;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:34:26.9:26.9,0,56.6:11:0:-26.75:27.42\n17\t75280201\t885044:1\tT\t]20:52003779]T\t61\tPASS\tEVDNC=ASSMB;INSERTION=G;MAPQ=60;MATEID=885044:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_51989001_52014001_51C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:22:39:35.3:61.7,0,35.3:22:0:-62:62\n17\t75431293\t815914:1\tG\t]17:76013043]G\t38\tPASS\tDISC_MAPQ=255;EVDNC=ASDIS;HOMSEQ=GCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC;MAPQ=60;MATEID=815914:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_17_75999001_76024001_11C;SPAN=581750;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:18:5:38,0,5:12:5:-39.01:39.01\n17\t75514279\t815782:1\tA\t]17:75693640]A\t23\tPASS\tEVDNC=ASSMB;INSERTION=ATTTCCT;MAPQ=60;MATEID=815782:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_17_75680501_75705501_62C;SPAN=179361;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:34:23.6:23.6,0,59.9:10:0:-23.45:24.42\n17\t75528391\t815709:2\tA\tA[17:75259894[\t26\tPASS\tEVDNC=ASSMB;HOMSEQ=A;MAPQ=60;MATEID=815709:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_17_75509001_75534001_14C;SPAN=268497;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:34:26.9:26.9,0,56.6:11:0:-26.75:27.42\n17\t75693640\t815782:2\tC\tC[17:75514279[\t23\tPASS\tEVDNC=ASSMB;INSERTION=ATTTCCT;MAPQ=60;MATEID=815782:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_17_75680501_75705501_62C;SPAN=179361;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:34:23.6:23.6,0,59.9:10:0:-23.45:24.42\n17\t75821480\t813847:2\tC\tC]17:69341591]\t62\tPASS\tDISC_MAPQ=57;EVDNC=DSCRD;IMPRECISE;MAPQ=57;MATEID=813847:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=17:69341591(+)-17:75821480(+)__17_69335001_69360001D;SPAN=6479889;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:21:16:5.7:62.7,5.7,0:0:21:-62.72:62.72\n17\t76013043\t815914:2\tC\tC[17:75431293[\t38\tPASS\tDISC_MAPQ=0;EVDNC=ASDIS;HOMSEQ=GCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC;MAPQ=28;MATEID=815914:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_17_75999001_76024001_11C;SPAN=581750;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:18:5:38,0,5:12:5:-39.01:39.01\n17\t78861205\t816744:1\tC\t]17:78878251]C\t31\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=CCC;MAPQ=60;MATEID=816744:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_17_78841001_78866001_7C;SPAN=17046;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:18:11.6:31.4,0,11.6:3:10:-31.6:31.6\n17\t78878251\t816744:2\tC\tC[17:78861205[\t31\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=CCC;MAPQ=60;MATEID=816744:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_17_78841001_78866001_7C;SPAN=17046;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:18:11.6:31.4,0,11.6:3:10:-31.6:31.6\n17\t79555272\t816912:1\tT\t]17:79555909]T\t50\tPASS\tDISC_MAPQ=24;EVDNC=DSCRD;IMPRECISE;MAPQ=24;MATEID=816912:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=17:79555272(-)-17:79555909(+)__17_79551501_79576501D;SPAN=637;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:18:33:30.5:50.3,0,30.5:0:18:-50.33:50.33\n17\t79555909\t816912:2\tT\tT[17:79555272[\t50\tPASS\tDISC_MAPQ=31;EVDNC=DSCRD;IMPRECISE;MAPQ=31;MATEID=816912:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=17:79555272(-)-17:79555909(+)__17_79551501_79576501D;SPAN=637;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:18:33:30.5:50.3,0,30.5:0:18:-50.33:50.33\n17\t80024303\t817074:1\tC\t]17:80024763]C\t54\tPASS\tDISC_MAPQ=47;EVDNC=DSCRD;IMPRECISE;MAPQ=47;MATEID=817074:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=17:80024303(-)-17:80024763(+)__17_80017001_80042001D;SPAN=460;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:20:40:44.9:54.8,0,44.9:0:20:-54.82:54.82\n17\t80024763\t817074:2\tA\tA[17:80024303[\t54\tPASS\tDISC_MAPQ=44;EVDNC=DSCRD;IMPRECISE;MAPQ=44;MATEID=817074:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=17:80024303(-)-17:80024763(+)__17_80017001_80042001D;SPAN=460;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:20:40:44.9:54.8,0,44.9:0:20:-54.82:54.82\n17\t80488068\t817257:1\tG\tG[17:80489964[\t49\tPASS\tDISC_MAPQ=56;EVDNC=ASDIS;HOMSEQ=GGTGGAGGGGAGGGACGCGGTGGAG;MAPQ=60;MATEID=817257:2;MATENM=0;NM=0;NUMPARTS=3;SCTG=c_17_80482501_80507501_16C;SECONDARY;SPAN=1896;SUBN=2;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:17:4:4.5:49.5,4.5,0:3:14:-49.51:49.51\n17\t80489964\t817257:2\tG\t]17:80488068]G\t49\tPASS\tDISC_MAPQ=59;EVDNC=ASDIS;HOMSEQ=GGTGGAGGGGAGGGACGCGGTGGAG;MAPQ=60;MATEID=817257:1;MATENM=0;NM=0;NUMPARTS=3;SCTG=c_17_80482501_80507501_16C;SECONDARY;SPAN=1896;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:17:4:4.5:49.5,4.5,0:3:14:-49.51:49.51\n17\t80497949\t817261:1\tT\t]17:80498108]T\t21\tPASS\tEVDNC=ASSMB;HOMSEQ=TGTGTGTGTTGTGTGTATATGTGAGTGTG;MAPQ=56;MATEID=817261:2;MATENM=5;NM=1;NUMPARTS=2;SCTG=c_17_80482501_80507501_4C;SPAN=159;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:65:21.5:21.5,0,140.3:12:0:-21.34:26.51\n17\t80498108\t817261:2\tG\tG[17:80497949[\t21\tPASS\tEVDNC=ASSMB;HOMSEQ=TGTGTGTGTTGTGTGTATATGTGAGTGTG;MAPQ=60;MATEID=817261:1;MATENM=1;NM=5;NUMPARTS=2;SCTG=c_17_80482501_80507501_4C;SPAN=159;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:65:21.5:21.5,0,140.3:12:0:-21.34:26.51\n18\t3211874\t819499:1\tA\t]18:3280177]A\t53\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=819499:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_18_3258501_3283501_0C;SPAN=68303;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:18:23:3.5:53,0,3.5:18:0:-55.29:55.29\n18\t3280177\t819499:2\tA\tA[18:3211874[\t53\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=819499:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_18_3258501_3283501_0C;SPAN=68303;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:18:23:3.5:53,0,3.5:18:0:-55.29:55.29\n18\t6317356\t12977:2\tA\tA[1:53952995[\t15\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;MAPQ=60;MATEID=12977:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_1_53949001_53974001_190C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:52:15.2:15.2,0,114.2:6:3:-15.09:19.61\n18\t6432597\t820234:2\tA\t[14:47694624[A\t46\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=T;MAPQ=60;MATEID=820234:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_18_6419001_6444001_8C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:16:13:4.2:46.2,4.2,0:11:5:-46.21:46.21\n18\t6432646\t820233:2\tT\tT]14:47514459]\t25\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=820233:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=14:47514459(+)-18:6432646(+)__18_6419001_6444001D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:15:12.2:25.4,0,12.2:0:9:-25.74:25.74\n18\t6914999\t820340:1\tA\t]18:6923688]A\t19\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=820340:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=18:6914999(-)-18:6923688(+)__18_6909001_6934001D;SPAN=8689;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:26:19.1:19.1,0,45.5:0:8:-19.1:19.73\n18\t6923688\t820340:2\tT\tT[18:6914999[\t19\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=820340:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=18:6914999(-)-18:6923688(+)__18_6909001_6934001D;SPAN=8689;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:26:19.1:19.1,0,45.5:0:8:-19.1:19.73\n18\t8888408\t820893:1\tT\tT[18:9170010[\t22\tPASS\tDISC_MAPQ=38;EVDNC=DSCRD;IMPRECISE;MAPQ=38;MATEID=820893:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=18:8888408(+)-18:9170010(-)__18_9163001_9188001D;SPAN=281602;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:26:22.4:22.4,0,42.2:0:9:-22.4:22.76\n18\t8888538\t820894:1\tA\t]18:9170224]A\t42\tPASS\tDISC_MAPQ=46;EVDNC=DSCRD;IMPRECISE;MAPQ=46;MATEID=820894:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=18:8888538(-)-18:9170224(+)__18_9163001_9188001D;SPAN=281686;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:14:17:1.2:42.9,1.2,0:0:14:-43.71:43.71\n18\t9170010\t820893:2\tT\t]18:8888408]T\t22\tPASS\tDISC_MAPQ=41;EVDNC=DSCRD;IMPRECISE;MAPQ=41;MATEID=820893:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=18:8888408(+)-18:9170010(-)__18_9163001_9188001D;SPAN=281602;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:26:22.4:22.4,0,42.2:0:9:-22.4:22.76\n18\t9170224\t820894:2\tG\tG[18:8888538[\t42\tPASS\tDISC_MAPQ=33;EVDNC=DSCRD;IMPRECISE;MAPQ=33;MATEID=820894:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=18:8888538(-)-18:9170224(+)__18_9163001_9188001D;SPAN=281686;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:14:17:1.2:42.9,1.2,0:0:14:-43.71:43.71\n18\t12202407\t69895:2\tA\t]2:6658148]A\t28\tPASS\tDISC_MAPQ=13;EVDNC=DSCRD;IMPRECISE;MAPQ=13;MATEID=69895:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=2:6658148(+)-18:12202407(-)__2_6639501_6664501D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:15:8.9:28.7,0,8.9:0:10:-29.37:29.37\n18\t14406760\t822300:2\tG\tG]13:18652931]\t20\tPASS\tDISC_MAPQ=30;EVDNC=DSCRD;IMPRECISE;MAPQ=30;MATEID=822300:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:18652931(+)-18:14406760(+)__18_14406001_14431001D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:21:20.6:20.6,0,30.5:0:8:-20.51:20.65\n18\t14641277\t822415:1\tT\t]18:14641411]T\t29\tPASS\tEVDNC=ASSMB;HOMSEQ=TCTCCCGCTTGCCGCCCTCTTTTCCCC;MAPQ=42;MATEID=822415:2;MATENM=5;NM=4;NUMPARTS=2;SCTG=c_18_14626501_14651501_25C;SPAN=134;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:26:29:29,0,35.6:11:0:-29:29.05\n18\t14641411\t822415:2\tC\tC[18:14641277[\t29\tPASS\tEVDNC=ASSMB;HOMSEQ=TCTCCCGCTTGCCGCCCTCTTTTCCCC;MAPQ=60;MATEID=822415:1;MATENM=4;NM=5;NUMPARTS=2;SCTG=c_18_14626501_14651501_25C;SPAN=134;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:26:29:29,0,35.6:11:0:-29:29.05\n18\t15388488\t822796:1\tG\tG[18:15389964[\t89\tPASS\tDISC_MAPQ=10;EVDNC=ASDIS;HOMSEQ=GAGCAGCTTTGAAACACTTTTTTTGTAGAATCTGCAAGTGGACATTTGGAGCACTTTGAG;MAPQ=60;MATEID=822796:2;MATENM=1;NM=9;NUMPARTS=2;SCTG=c_18_15386001_15411001_113C;SPAN=1476;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:31:48:29.6:89,0,29.6:17:19:-90.3:90.3\n18\t15389964\t822796:2\tG\t]18:15388488]G\t89\tPASS\tDISC_MAPQ=31;EVDNC=ASDIS;HOMSEQ=GAGCAGCTTTGAAACACTTTTTTTGTAGAATCTGCAAGTGGACATTTGGAGCACTTTGAG;MAPQ=60;MATEID=822796:1;MATENM=9;NM=1;NUMPARTS=2;SCTG=c_18_15386001_15411001_113C;SPAN=1476;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:31:48:29.6:89,0,29.6:17:19:-90.3:90.3\n18\t15472242\t822965:1\tG\t]18:15610395]G\t39\tPASS\tDISC_MAPQ=13;EVDNC=DSCRD;IMPRECISE;MAPQ=13;MATEID=822965:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=18:15472242(-)-18:15610395(+)__18_15606501_15631501D;SPAN=138153;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:13:6:3.6:39.6,3.6,0:0:13:-39.61:39.61\n18\t15473014\t823058:1\tC\tC[18:15699547[\t26\tPASS\tDISC_MAPQ=21;EVDNC=DSCRD;IMPRECISE;MAPQ=21;MATEID=823058:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=18:15473014(+)-18:15699547(-)__18_15680001_15705001D;SPAN=226533;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:25:26:26,0,35.9:0:10:-25.98:26.09\n18\t15484866\t823029:1\tC\tC[18:15670595[\t38\tPASS\tDISC_MAPQ=21;EVDNC=DSCRD;IMPRECISE;MAPQ=21;MATEID=823029:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=18:15484866(+)-18:15670595(-)__18_15655501_15680501D;SPAN=185729;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:17:2:38.3,0,2:0:13:-39.65:39.65\n18\t15512491\t822922:1\tA\tA[18:15572260[\t26\tPASS\tDISC_MAPQ=34;EVDNC=DSCRD;IMPRECISE;MAPQ=34;MATEID=822922:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=18:15512491(+)-18:15572260(-)__18_15557501_15582501D;SPAN=59769;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:11:0.2:26.6,0,0.2:0:9:-28.04:28.04\n18\t15572260\t822922:2\tT\t]18:15512491]T\t26\tPASS\tDISC_MAPQ=30;EVDNC=DSCRD;IMPRECISE;MAPQ=30;MATEID=822922:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=18:15512491(+)-18:15572260(-)__18_15557501_15582501D;SPAN=59769;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:11:0.2:26.6,0,0.2:0:9:-28.04:28.04\n18\t15573653\t823140:1\tT\tT[18:15770472[\t99\tPASS\tDISC_MAPQ=30;EVDNC=DSCRD;IMPRECISE;MAPQ=30;MATEID=823140:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=18:15573653(+)-18:15770472(-)__18_15753501_15778501D;SPAN=196819;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:39:6:10.8:118.8,10.8,0:0:39:-118.8:118.8\n18\t15573782\t823142:1\tC\t]18:15772299]C\t26\tPASS\tDISC_MAPQ=16;EVDNC=DSCRD;IMPRECISE;MAPQ=16;MATEID=823142:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=18:15573782(-)-18:15772299(+)__18_15753501_15778501D;SPAN=198517;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:9:9:2.4:26.4,2.4,0:0:9:-26.41:26.41\n18\t15577908\t822942:1\tG\tG[18:15776457[\t64\tPASS\tDISC_MAPQ=22;EVDNC=DSCRD;IMPRECISE;MAPQ=22;MATEID=822942:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=18:15577908(+)-18:15776457(-)__18_15557501_15582501D;SPAN=198549;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:22:28:5.3:64.7,0,5.3:0:22:-67.65:67.65\n18\t15582223\t822954:1\tT\t]18:15743887]T\t39\tPASS\tDISC_MAPQ=31;EVDNC=DSCRD;IMPRECISE;MAPQ=31;MATEID=822954:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=18:15582223(-)-18:15743887(+)__18_15582001_15607001D;SPAN=161664;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:13:16:0.9:39.6,0.9,0:0:13:-40.41:40.41\n18\t15593264\t823146:1\tG\tG[18:15757733[\t25\tPASS\tDISC_MAPQ=23;EVDNC=DSCRD;IMPRECISE;MAPQ=23;MATEID=823146:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=18:15593264(+)-18:15757733(-)__18_15753501_15778501D;SPAN=164469;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:17:15.2:25.1,0,15.2:0:9:-24.99:24.99\n18\t15598663\t822950:2\tG\t]9:65079191]G\t23\tPASS\tDISC_MAPQ=26;EVDNC=DSCRD;IMPRECISE;MAPQ=26;MATEID=822950:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=9:65079191(+)-18:15598663(-)__18_15582001_15607001D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:12:6.5:23,0,6.5:0:8:-23.49:23.49\n18\t15610395\t822965:2\tT\tT[18:15472242[\t39\tPASS\tDISC_MAPQ=25;EVDNC=DSCRD;IMPRECISE;MAPQ=25;MATEID=822965:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=18:15472242(-)-18:15610395(+)__18_15606501_15631501D;SPAN=138153;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:13:6:3.6:39.6,3.6,0:0:13:-39.61:39.61\n18\t15670595\t823029:2\tC\t]18:15484866]C\t38\tPASS\tDISC_MAPQ=34;EVDNC=DSCRD;IMPRECISE;MAPQ=34;MATEID=823029:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=18:15484866(+)-18:15670595(-)__18_15655501_15680501D;SPAN=185729;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:17:2:38.3,0,2:0:13:-39.65:39.65\n18\t15691965\t823077:1\tA\tA[18:20640424[\t99\tPASS\tDISC_MAPQ=36;EVDNC=ASDIS;INSERTION=TCCCTCTTTTTATAGAATTTAAAACTGGATATATGGATAGCTCTAACTATTTCTTTATAAACGTT;MAPQ=60;MATEID=823077:2;MATENM=6;NM=5;NUMPARTS=2;SCTG=c_18_15680001_15705001_713C;SPAN=4948459;SUBN=1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:33:8:9:99,9,0:30:5:-99.02:99.02\n18\t15699547\t823058:2\tT\t]18:15473014]T\t26\tPASS\tDISC_MAPQ=25;EVDNC=DSCRD;IMPRECISE;MAPQ=25;MATEID=823058:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=18:15473014(+)-18:15699547(-)__18_15680001_15705001D;SPAN=226533;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:25:26:26,0,35.9:0:10:-25.98:26.09\n18\t15730131\t823155:1\tA\t]18:15755215]A\t69\tPASS\tDISC_MAPQ=36;EVDNC=DSCRD;IMPRECISE;MAPQ=36;MATEID=823155:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=18:15730131(-)-18:15755215(+)__18_15753501_15778501D;SPAN=25084;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:23:10:6.3:69.3,6.3,0:0:23:-69.32:69.32\n18\t15743887\t822954:2\tA\tA[18:15582223[\t39\tPASS\tDISC_MAPQ=36;EVDNC=DSCRD;IMPRECISE;MAPQ=36;MATEID=822954:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=18:15582223(-)-18:15743887(+)__18_15582001_15607001D;SPAN=161664;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:13:16:0.9:39.6,0.9,0:0:13:-40.41:40.41\n18\t15745704\t823815:1\tT\tT[18:20611478[\t36\tPASS\tDISC_MAPQ=30;EVDNC=DSCRD;IMPRECISE;MAPQ=30;MATEID=823815:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=18:15745704(+)-18:20611478(-)__18_20604501_20629501D;SPAN=4865774;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:12:11:3.3:36.3,3.3,0:0:12:-36.31:36.31\n18\t15754745\t823161:1\tT\t]18:20640702]T\t36\tPASS\tDISC_MAPQ=39;EVDNC=DSCRD;IMPRECISE;MAPQ=39;MATEID=823161:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=18:15754745(-)-18:20640702(+)__18_15753501_15778501D;SPAN=4885957;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:12:9:3.3:36.3,3.3,0:0:12:-36.31:36.31\n18\t15755215\t823155:2\tT\tT[18:15730131[\t69\tPASS\tDISC_MAPQ=39;EVDNC=DSCRD;IMPRECISE;MAPQ=39;MATEID=823155:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=18:15730131(-)-18:15755215(+)__18_15753501_15778501D;SPAN=25084;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:23:10:6.3:69.3,6.3,0:0:23:-69.32:69.32\n18\t15757733\t823146:2\tA\t]18:15593264]A\t25\tPASS\tDISC_MAPQ=34;EVDNC=DSCRD;IMPRECISE;MAPQ=34;MATEID=823146:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=18:15593264(+)-18:15757733(-)__18_15753501_15778501D;SPAN=164469;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:17:15.2:25.1,0,15.2:0:9:-24.99:24.99\n18\t15770472\t823140:2\tT\t]18:15573653]T\t99\tPASS\tDISC_MAPQ=25;EVDNC=DSCRD;IMPRECISE;MAPQ=25;MATEID=823140:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=18:15573653(+)-18:15770472(-)__18_15753501_15778501D;SPAN=196819;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:39:6:10.8:118.8,10.8,0:0:39:-118.8:118.8\n18\t15772299\t823142:2\tC\tC[18:15573782[\t26\tPASS\tDISC_MAPQ=27;EVDNC=DSCRD;IMPRECISE;MAPQ=27;MATEID=823142:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=18:15573782(-)-18:15772299(+)__18_15753501_15778501D;SPAN=198517;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:9:9:2.4:26.4,2.4,0:0:9:-26.41:26.41\n18\t15776457\t822942:2\tC\t]18:15577908]C\t64\tPASS\tDISC_MAPQ=18;EVDNC=DSCRD;IMPRECISE;MAPQ=18;MATEID=822942:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=18:15577908(+)-18:15776457(-)__18_15557501_15582501D;SPAN=198549;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:22:28:5.3:64.7,0,5.3:0:22:-67.65:67.65\n18\t15837315\t823280:1\tT\t]18:16263138]T\t28\tPASS\tDISC_MAPQ=18;EVDNC=DSCRD;IMPRECISE;MAPQ=18;MATEID=823280:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=18:15837315(-)-18:16263138(+)__18_16243501_16268501D;SPAN=425823;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:15:8.9:28.7,0,8.9:0:10:-29.37:29.37\n18\t16263138\t823280:2\tA\tA[18:15837315[\t28\tPASS\tDISC_MAPQ=22;EVDNC=DSCRD;IMPRECISE;MAPQ=22;MATEID=823280:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=18:15837315(-)-18:16263138(+)__18_16243501_16268501D;SPAN=425823;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:15:8.9:28.7,0,8.9:0:10:-29.37:29.37\n18\t17538975\t823381:1\tT\t]18:18038741]T\t59\tPASS\tDISC_MAPQ=39;EVDNC=ASDIS;HOMSEQ=TGAAAAAGGAAATATCTTCCCATAAAAACTAGACAGAAGCATTCTCAGAAACTTA;MAPQ=54;MATEID=823381:2;MATENM=1;NM=0;NUMPARTS=2;REPSEQ=TGTG;SCTG=c_18_17517501_17542501_323C;SECONDARY;SPAN=499766;SUBN=2;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:20:14:5.4:59.4,5.4,0:6:14:-59.41:59.41\n18\t17816419\t823778:1\tG\t[18:20561646[G\t33\tPASS\tDISC_MAPQ=33;EVDNC=DSCRD;IMPRECISE;MAPQ=33;MATEID=823778:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=18:17816419(-)-18:20561646(-)__18_20555501_20580501D;SPAN=2745227;SVTYPE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752001D;SPAN=23750;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:22:15:6:66,6,0:0:22:-66.02:66.02\n18\t20737933\t824051:1\tT\tT[18:20802928[\t31\tPASS\tDISC_MAPQ=21;EVDNC=DSCRD;IMPRECISE;MAPQ=21;MATEID=824051:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=18:20737933(+)-18:20802928(-)__18_20800501_20825501D;SPAN=64995;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:30:31.1:31.1,0,44.3:0:12:-31.18:31.31\n18\t20802928\t824051:2\tA\t]18:20737933]A\t31\tPASS\tDISC_MAPQ=20;EVDNC=DSCRD;IMPRECISE;MAPQ=20;MATEID=824051:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=18:20737933(+)-18:20802928(-)__18_20800501_20825501D;SPAN=64995;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:30:31.1:31.1,0,44.3:0:12:-31.18:31.31\n18\t22231992\t824369:1\tA\t]18:22232842]A\t19\tPASS\tDISC_MAPQ=19;EVDNC=DSCRD;IMPRECISE;MAPQ=19;MATEID=824369:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=18:22231992(-)-18:22232842(+)__18_22221501_22246501D;SPAN=850;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:36:19.7:19.7,0,69.2:0:9:-19.59:21.23\n18\t22232842\t824369:2\tA\tA[18:22231992[\t19\tPASS\tDISC_MAPQ=18;EVDNC=DSCRD;IMPRECISE;MAPQ=18;MATEID=824369:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=18:22231992(-)-18:22232842(+)__18_22221501_22246501D;SPAN=850;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:36:19.7:19.7,0,69.2:0:9:-19.59:21.23\n18\t22550726\t988807:1\tT\t[Un_KN707780v1_decoy:1[T\t42\tPASS\tDISC_MAPQ=255;EVDNC=TSI_L;MAPQ=60;MATEID=988807:2;MATENM=0;NM=0;NUMPARTS=4;SCTG=c_631_1_5691_3C;SPAN=-1;SUBN=3;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:14:4:3.9:42.9,3.9,0:14:0:-42.91:42.91\n18\t22550726\t824462:1\tT\t[Un_KN707780v1_decoy:1[T\t75\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=824462:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_18_22540001_22565001_3C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:25:15:6.9:75.9,6.9,0:25:0:-75.92:75.92\n18\t24323408\t824912:1\tC\tC[18:24324630[\t65\tPASS\tEVDNC=ASSMB;HOMSEQ=AAAAATTAGC;MAPQ=60;MATEID=824912:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_18_24304001_24329001_24C;SPAN=1222;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:25:60:65.6:65.6,0,85.4:25:0:-65.66:65.8\n18\t24324630\t824912:2\tA\t]18:24323408]A\t65\tPASS\tEVDNC=ASSMB;HOMSEQ=AAAAATTAGC;MAPQ=60;MATEID=824912:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_18_24304001_24329001_24C;SPAN=1222;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:25:60:65.6:65.6,0,85.4:25:0:-65.66:65.8\n18\t27149217\t825552:1\tC\t]18:27159058]C\t30\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=825552:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=18:27149217(-)-18:27159058(+)__18_27146001_27171001D;SPAN=9841;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:21:20.6:30.5,0,20.6:0:11:-30.47:30.47\n18\t27159058\t825552:2\tT\tT[18:27149217[\t30\tPASS\tDISC_MAPQ=47;EVDNC=DSCRD;IMPRECISE;MAPQ=47;MATEID=825552:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=18:27149217(-)-18:27159058(+)__18_27146001_27171001D;SPAN=9841;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:21:20.6:30.5,0,20.6:0:11:-30.47:30.47\n18\t28693120\t825853:1\tA\tA[18:28698448[\t42\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=825853:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=18:28693120(+)-18:28698448(-)__18_28689501_28714501D;SPAN=5328;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:14:5:3.9:42.9,3.9,0:0:14:-42.91:42.91\n18\t28698448\t825853:2\tA\t]18:28693120]A\t42\tPASS\tDISC_MAPQ=36;EVDNC=DSCRD;IMPRECISE;MAPQ=36;MATEID=825853:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=18:28693120(+)-18:28698448(-)__18_28689501_28714501D;SPAN=5328;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:14:5:3.9:42.9,3.9,0:0:14:-42.91:42.91\n18\t35943975\t827512:1\tA\t]18:36231155]A\t35\tPASS\tEVDNC=ASSMB;HOMSEQ=A;MAPQ=60;MATEID=827512:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_18_36211001_36236001_21C;SPAN=287180;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:15:2.3:35.3,0,2.3:12:0:-37.11:37.11\n18\t36114704\t827477:1\tC\t]18:36135496]C\t64\tPASS\tEVDNC=ASSMB;INSERTION=TTCCATTTCTGGAATTCATAA;MAPQ=60;MATEID=827477:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_18_36113001_36138001_4C;SPAN=20792;SUBN=2;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:26:76:64.7:64.7,0,124.1:26:0:-64.46:65.58\n18\t36135496\t827477:2\tA\tA[18:36114704[\t64\tPASS\tEVDNC=ASSMB;INSERTION=TTCCATTTCTGGAATTCATAA;MAPQ=60;MATEID=827477:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_18_36113001_36138001_4C;SPAN=20792;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:26:76:64.7:64.7,0,124.1:26:0:-64.46:65.58\n18\t36231155\t827512:2\tA\tA[18:35943975[\t35\tPASS\tEVDNC=ASSMB;HOMSEQ=A;MAPQ=60;MATEID=827512:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_18_36211001_36236001_21C;SPAN=287180;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:15:2.3:35.3,0,2.3:12:0:-37.11:37.11\n18\t39481682\t828095:1\tC\tC[18:39481999[\t46\tPASS\tEVDNC=ASSMB;HOMSEQ=AAAGAATCAGATTC;MAPQ=60;MATEID=828095:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_18_39469501_39494501_6C;SPAN=317;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:15:9:4.2:46.2,4.2,0:15:0:-46.21:46.21\n18\t39481999\t828095:2\tA\t]18:39481682]A\t46\tPASS\tEVDNC=ASSMB;HOMSEQ=AAAGAATCAGATTC;MAPQ=60;MATEID=828095:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_18_39469501_39494501_6C;SPAN=317;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:15:9:4.2:46.2,4.2,0:15:0:-46.21:46.21\n18\t41284924\t828480:1\tA\tA[18:41288379[\t99\tPASS\tDISC_MAPQ=59;EVDNC=DSCRD;IMPRECISE;MAPQ=59;MATEID=828480:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=18:41284924(+)-18:41288379(-)__18_41282501_41307501D;SPAN=3455;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:33:5:9:99,9,0:0:33:-99.02:99.02\n18\t41288379\t828480:2\tA\t]18:41284924]A\t99\tPASS\tDISC_MAPQ=59;EVDNC=DSCRD;IMPRECISE;MAPQ=59;MATEID=828480:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=18:41284924(+)-18:41288379(-)__18_41282501_41307501D;SPAN=3455;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:33:5:9:99,9,0:0:33:-99.02:99.02\n18\t45729261\t829333:1\tC\t]18:45825466]C\t23\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=CTGTT;MAPQ=60;MATEID=829333:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_18_45815001_45840001_9C;SPAN=96205;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:8:6:2.1:23.1,2.1,0:6:5:-23.11:23.11\n18\t45825466\t829333:2\tT\tT[18:45729261[\t23\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=CTGTT;MAPQ=60;MATEID=829333:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_18_45815001_45840001_9C;SPAN=96205;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:8:6:2.1:23.1,2.1,0:6:5:-23.11:23.11\n18\t46441888\t614599:2\tG\t[12:7677446[G\t33\tPASS\tDISC_MAPQ=0;EVDNC=ASDIS;INSERTION=GGCCC;MAPQ=56;MATEID=614599:1;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_12_7668501_7693501_2C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:11:8:3:33,3,0:9:6:-33.01:33.01\n18\t48671984\t829827:1\tA\tA]Un_KN707797v1_decoy:4209]\t52\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=829827:2;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_18_48657001_48682001_3C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:18:8:4.8:52.8,4.8,0:18:0:-52.81:52.81\n18\t50168722\t830247:1\tA\tA[18:50172016[\t49\tPASS\tDISC_MAPQ=53;EVDNC=DSCRD;IMPRECISE;MAPQ=53;MATEID=830247:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=18:50168722(+)-18:50172016(-)__18_50151501_50176501D;SPAN=3294;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:17:3:4.5:49.5,4.5,0:0:17:-49.51:49.51\n18\t50172016\t830247:2\tA\t]18:50168722]A\t49\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=830247:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=18:50168722(+)-18:50172016(-)__18_50151501_50176501D;SPAN=3294;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:17:3:4.5:49.5,4.5,0:0:17:-49.51:49.51\n18\t53679599\t831138:1\tA\tA[18:53684205[\t72\tPASS\tEVDNC=ASSMB;INSERTION=GAATAGGTGGCTATCTTCTAGGTGGCTAAACACCT;MAPQ=60;MATEID=831138:2;MATENM=6;NM=3;NUMPARTS=2;SCTG=c_18_53655001_53680001_3C;SPAN=4606;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:24:4:6.6:72.6,6.6,0:24:0:-72.62:72.62\n18\t53684205\t831138:2\tA\t]18:53679599]A\t72\tPASS\tEVDNC=ASSMB;INSERTION=GAATAGGTGGCTATCTTCTAGGTGGCTAAACACCT;MAPQ=60;MATEID=831138:1;MATENM=3;NM=6;NUMPARTS=2;SCTG=c_18_53655001_53680001_3C;SPAN=4606;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:24:4:6.6:72.6,6.6,0:24:0:-72.62:72.62\n18\t54415776\t831595:1\tG\t]18:55012965]G\t46\tPASS\tEVDNC=ASSMB;HOMSEQ=G;MAPQ=60;MATEID=831595:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_18_55002501_55027501_1C;SPAN=597189;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:16:12:4.2:46.2,4.2,0:16:0:-46.21:46.21\n18\t54426714\t831418:1\tG\tG[18:54430589[\t99\tPASS\tDISC_MAPQ=59;EVDNC=DSCRD;IMPRECISE;MAPQ=59;MATEID=831418:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=18:54426714(+)-18:54430589(-)__18_54414501_54439501D;SPAN=3875;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:44:13:12.3:135.3,12.3,0:0:44:-135.3:135.3\n18\t54430589\t831418:2\tG\t]18:54426714]G\t99\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=831418:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=18:54426714(+)-18:54430589(-)__18_54414501_54439501D;SPAN=3875;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:44:13:12.3:135.3,12.3,0:0:44:-135.3:135.3\n18\t54537527\t831451:1\tN\t]18:54538399]N\t95\tPASS\tDISC_MAPQ=35;EVDNC=DSCRD;IMPRECISE;MAPQ=35;MATEID=831451:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=18:54537527(-)-18:54538399(+)__18_54537001_54562001D;SPAN=872;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:32:25:8.7:95.7,8.7,0:0:32:-95.72:95.72\n18\t54538399\t831451:2\tA\tA[18:54537527[\t95\tPASS\tDISC_MAPQ=36;EVDNC=DSCRD;IMPRECISE;MAPQ=36;MATEID=831451:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=18:54537527(-)-18:54538399(+)__18_54537001_54562001D;SPAN=872;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:32:25:8.7:95.7,8.7,0:0:32:-95.72:95.72\n18\t55012965\t831595:2\tG\tG[18:54415776[\t46\tPASS\tEVDNC=ASSMB;HOMSEQ=G;MAPQ=60;MATEID=831595:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_18_55002501_55027501_1C;SPAN=597189;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:16:12:4.2:46.2,4.2,0:16:0:-46.21:46.21\n18\t57714342\t832138:2\tC\t[5:176306407[C\t99\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AG;MAPQ=60;MATEID=832138:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_18_57697501_57722501_6C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:42:15:11.7:128.7,11.7,0:25:23:-128.7:128.7\n18\t57714588\t832137:2\tG\tG]5:176306387]\t82\tPASS\tDISC_MAPQ=51;EVDNC=ASDIS;HOMSEQ=C;MAPQ=60;MATEID=832137:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_18_57697501_57722501_10C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:27:10:7.5:82.5,7.5,0:27:7:-82.52:82.52\n18\t60943836\t832894:1\tT\t]18:61036218]T\t46\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TA;MAPQ=60;MATEID=832894:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_18_61029501_61054501_1C;SPAN=92382;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:15:13:4.2:46.2,4.2,0:11:11:-46.21:46.21\n18\t61036218\t832894:2\tA\tA[18:60943836[\t46\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TA;MAPQ=60;MATEID=832894:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_18_61029501_61054501_1C;SPAN=92382;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:15:13:4.2:46.2,4.2,0:11:11:-46.21:46.21\n18\t66670210\t834219:1\tC\t]18:66682051]C\t23\tPASS\tEVDNC=ASSMB;HOMSEQ=CTT;MAPQ=60;MATEID=834219:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_18_66664501_66689501_5C;SPAN=11841;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:23:23.3:23.3,0,33.2:9:0:-23.24:23.37\n18\t66682051\t834219:2\tT\tT[18:66670210[\t23\tPASS\tEVDNC=ASSMB;HOMSEQ=CTT;MAPQ=60;MATEID=834219:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_18_66664501_66689501_5C;SPAN=11841;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:23:23.3:23.3,0,33.2:9:0:-23.24:23.37\n18\t68905257\t349695:2\tG\t[6:75321511[G\t49\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TC;MAPQ=60;MATEID=349695:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_6_75313001_75338001_23C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:16:17:4.5:49.5,4.5,0:14:3:-49.51:49.51\n18\t71950157\t835731:2\tT\tT]2:143253785]\t36\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=835731:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=2:143253785(+)-18:71950157(+)__18_71932001_71957001D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:12:6:3.3:36.3,3.3,0:0:12:-36.31:36.31\n18\t74044264\t836323:2\tA\t[9:125123053[A\t46\tPASS\tDISC_MAPQ=7;EVDNC=ASDIS;INSERTION=AGATA;MAPQ=60;MATEID=836323:1;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_18_74039001_74064001_4C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:15:7:4.2:46.2,4.2,0:12:4:-46.21:46.21\n18\t74044279\t836324:2\tC\tC]9:125123230]\t56\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;MAPQ=60;MATEID=836324:1;MATENM=0;NM=9;NUMPARTS=2;SCTG=c_18_74039001_74064001_2C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:19:7:5.1:56.1,5.1,0:15:6:-56.11:56.11\n19\t559970\t838208:1\tC\tC[19:560561[\t12\tPASS\tEVDNC=ASSMB;HOMSEQ=GAGTCTCGCTCTGTCGCCCAGGCTGGAGTGC;MAPQ=60;MATEID=838208:2;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_19_539001_564001_104C;SPAN=591;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:5:16:12.2:12.2,0,25.4:5:0:-12.01:12.37\n19\t560561\t838208:2\tG\t]19:559970]G\t12\tPASS\tEVDNC=ASSMB;HOMSEQ=GAGTCTCGCTCTGTCGCCCAGGCTGGAGTGC;MAPQ=41;MATEID=838208:1;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_19_539001_564001_104C;SPAN=591;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:5:16:12.2:12.2,0,25.4:5:0:-12.01:12.37\n19\t1181750\t838461:1\tA\t]19:1259508]A\t23\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=838461:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=19:1181750(-)-19:1259508(+)__19_1249501_1274501D;SPAN=77758;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:8:8:2.1:23.1,2.1,0:0:8:-23.11:23.11\n19\t1182662\t838437:1\tA\tA[19:1183136[\t34\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=GGAGGCGGAGGTTGCAGTGAGCCGAGATCGCACCACTGCACTCCA;MAPQ=60;MATEID=838437:2;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_19_1176001_1201001_58C;SPAN=474;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:19:11.3:34.4,0,11.3:9:4:-34.76:34.76\n19\t1183136\t838437:2\tG\t]19:1182662]G\t34\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=GGAGGCGGAGGTTGCAGTGAGCCGAGATCGCACCACTGCACTCCA;MAPQ=60;MATEID=838437:1;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_19_1176001_1201001_58C;SPAN=474;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:19:11.3:34.4,0,11.3:9:4:-34.76:34.76\n19\t1259508\t838461:2\tT\tT[19:1181750[\t23\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=838461:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=19:1181750(-)-19:1259508(+)__19_1249501_1274501D;SPAN=77758;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:8:8:2.1:23.1,2.1,0:0:8:-23.11:23.11\n19\t4511483\t839493:1\tG\t]19:4511907]G\t32\tPASS\tDISC_MAPQ=45;EVDNC=ASDIS;HOMSEQ=GTCAGCACGGTCTTGGCCGTGTCTACACC;MAPQ=60;MATEID=839493:2;MATENM=2;NM=2;NUMPARTS=2;SCTG=c_19_4508001_4533001_31C;SPAN=424;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:24:26.3:32.9,0,26.3:9:3:-32.89:32.89\n19\t4511907\t839493:2\tC\tC[19:4511483[\t32\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=GTCAGCACGGTCTTGGCCGTGTCTACACC;MAPQ=60;MATEID=839493:1;MATENM=2;NM=2;NUMPARTS=2;SCTG=c_19_4508001_4533001_31C;SPAN=424;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:24:26.3:32.9,0,26.3:9:3:-32.89:32.89\n19\t4512616\t839494:1\tT\tT[19:4513083[\t22\tPASS\tEVDNC=ASSMB;HOMSEQ=TGGTGTCCACGCCGGTCTGGATGGTTCCT;MAPQ=60;MATEID=839494:2;MATENM=2;NM=2;NUMPARTS=2;SCTG=c_19_4508001_4533001_61C;SPAN=467;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:14:12.5:22.4,0,12.5:8:0:-22.62:22.62\n19\t4513083\t839494:2\tT\t]19:4512616]T\t22\tPASS\tEVDNC=ASSMB;HOMSEQ=TGGTGTCCACGCCGGTCTGGATGGTTCCT;MAPQ=60;MATEID=839494:1;MATENM=2;NM=2;NUMPARTS=2;SCTG=c_19_4508001_4533001_61C;SPAN=467;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:14:12.5:22.4,0,12.5:8:0:-22.62:22.62\n19\t4618612\t839527:1\tG\tG[19:4619569[\t9\tPASS\tEVDNC=ASSMB;HOMSEQ=CCTCTCCTCTGTCTCTCCCTCTCCTCTG;MAPQ=60;MATEID=839527:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_19_4606001_4631001_42C;SPAN=957;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:4:12:9.8:9.8,0,19.7:4:0:-9.831:10.03\n19\t4619569\t839527:2\tC\t]19:4618612]C\t9\tPASS\tEVDNC=ASSMB;HOMSEQ=CCTCTCCTCTGTCTCTCCCTCTCCTCTG;MAPQ=60;MATEID=839527:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_19_4606001_4631001_42C;SPAN=957;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:4:12:9.8:9.8,0,19.7:4:0:-9.831:10.03\n19\t5396869\t839792:1\tA\t]19:5397846]A\t28\tPASS\tEVDNC=ASSMB;HOMSEQ=A;MAPQ=60;MATEID=839792:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_19_5390001_5415001_78C;SPAN=977;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:29:28.1:28.1,0,44.6:11:0:-28.16:28.37\n19\t5397846\t839792:2\tA\tA[19:5396869[\t28\tPASS\tEVDNC=ASSMB;HOMSEQ=A;MAPQ=60;MATEID=839792:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_19_5390001_5415001_78C;SPAN=977;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:29:28.1:28.1,0,44.6:11:0:-28.16:28.37\n19\t5761464\t839907:1\tG\t]19:5761619]G\t44\tPASS\tEVDNC=ASSMB;HOMSEQ=G;MAPQ=60;MATEID=839907:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_19_5757501_5782501_26C;SPAN=155;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:16:29:28.1:44.6,0,28.1:16:0:-44.86:44.86\n19\t5761619\t839907:2\tG\tG[19:5761464[\t44\tPASS\tEVDNC=ASSMB;HOMSEQ=G;MAPQ=60;MATEID=839907:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_19_5757501_5782501_26C;SPAN=155;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:16:29:28.1:44.6,0,28.1:16:0:-44.86:44.86\n19\t6163211\t840019:1\tA\tA[19:6163480[\t56\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=CCTGTAATCCCAGCACTTTGGGA;MAPQ=60;MATEID=840019:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_19_6149501_6174501_3C;SPAN=269;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:19:5:5.1:56.1,5.1,0:9:13:-56.11:56.11\n19\t6163480\t840019:2\tC\t]19:6163211]C\t56\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=CCTGTAATCCCAGCACTTTGGGA;MAPQ=60;MATEID=840019:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_19_6149501_6174501_3C;SPAN=269;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:19:5:5.1:56.1,5.1,0:9:13:-56.11:56.11\n19\t7153006\t840455:1\tA\t]19:7153587]A\t19\tPASS\tDISC_MAPQ=19;EVDNC=DSCRD;IMPRECISE;MAPQ=19;MATEID=840455:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=19:7153006(-)-19:7153587(+)__19_7129501_7154501D;SPAN=581;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:37:19.4:19.4,0,72.2:0:9:-19.31:21.11\n19\t7153587\t840455:2\tT\tT[19:7153006[\t19\tPASS\tDISC_MAPQ=57;EVDNC=DSCRD;IMPRECISE;MAPQ=57;MATEID=840455:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=19:7153006(-)-19:7153587(+)__19_7129501_7154501D;SPAN=581;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:37:19.4:19.4,0,72.2:0:9:-19.31:21.11\n19\t7322146\t840547:1\tG\t[19:7322460[G\t26\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=840547:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=19:7322146(-)-19:7322460(-)__19_7301001_7326001D;SPAN=314;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:9:4:2.4:26.4,2.4,0:0:9:-26.41:26.41\n19\t7322460\t840547:2\tA\t[19:7322146[A\t26\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=840547:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=19:7322146(-)-19:7322460(-)__19_7301001_7326001D;SPAN=314;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:9:4:2.4:26.4,2.4,0:0:9:-26.41:26.41\n19\t8346856\t841006:1\tG\tG[19:8349598[\t22\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=841006:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_19_8330001_8355001_50C;SPAN=2742;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:14:12.5:22.4,0,12.5:8:0:-22.62:22.62\n19\t8349598\t841006:2\tA\t]19:8346856]A\t22\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=841006:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_19_8330001_8355001_50C;SPAN=2742;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:14:12.5:22.4,0,12.5:8:0:-22.62:22.62\n19\t8473352\t378412:2\tT\t]7:5791828]T\t29\tPASS\tDISC_MAPQ=3;EVDNC=ASDIS;HOMSEQ=TCGGGAGGCTGAGGCAG;MAPQ=41;MATEID=378412:1;MATENM=8;NM=2;NUMPARTS=2;SCTG=c_7_5782001_5807001_18C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:10:7:2.7:29.7,2.7,0:10:5:-29.71:29.71\n19\t8896565\t841246:1\tC\t]Un_JTFH01000107v1_decoy:3383]C\t19\tPASS\tEVDNC=ASSMB;HOMSEQ=CACCACCACCA;MAPQ=60;MATEID=841246:2;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_19_8893501_8918501_84C;SPAN=-1;SUBN=4;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:7:12:9.8:19.7,0,9.8:7:0:-19.89:19.89\n19\t8896582\t994908:1\tT\tT]Un_JTFH01000017v1_decoy:7832]\t33\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=994908:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_860_1_7832_0C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:11:2:3:33,3,0:11:0:-33.01:33.01\n19\t9112286\t841364:1\tC\tC[19:9114446[\t20\tPASS\tEVDNC=ASSMB;HOMSEQ=CATGCCTGTAATCCCAGC;MAPQ=60;MATEID=841364:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_19_9114001_9139001_114C;SPAN=2160;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:7:9:0.8:20.6,0,0.8:7:0:-21.46:21.46\n19\t9114446\t841364:2\tC\t]19:9112286]C\t20\tPASS\tEVDNC=ASSMB;HOMSEQ=CATGCCTGTAATCCCAGC;MAPQ=60;MATEID=841364:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_19_9114001_9139001_114C;SPAN=2160;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:7:9:0.8:20.6,0,0.8:7:0:-21.46:21.46\n19\t9167128\t463125:2\tT\t]8:93654319]T\t62\tPASS\tDISC_MAPQ=45;EVDNC=DSCRD;IMPRECISE;MAPQ=45;MATEID=463125:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=8:93654319(+)-19:9167128(-)__8_93639001_93664001D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:21:10:5.7:62.7,5.7,0:0:21:-62.72:62.72\n19\t10890365\t841999:1\tT\t]19:10986999]T\t32\tPASS\tEVDNC=ASSMB;HOMSEQ=T;MAPQ=60;MATEID=841999:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_19_10976001_11001001_62C;SPAN=96634;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:15:5.6:32,0,5.6:11:0:-33.15:33.15\n19\t10986999\t841999:2\tT\tT[19:10890365[\t32\tPASS\tEVDNC=ASSMB;HOMSEQ=T;MAPQ=60;MATEID=841999:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_19_10976001_11001001_62C;SPAN=96634;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:15:5.6:32,0,5.6:11:0:-33.15:33.15\n19\t12445946\t842403:1\tG\tG[19:12447413[\t36\tPASS\tDISC_MAPQ=49;EVDNC=ASDIS;HOMSEQ=GGCTAATTTTTTGTATTTTTAGTAGAGATGGGGTTTCACCGTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCACCTCGGCCTCCCAAAGTGCTGGGATTACAGG;MAPQ=60;MATEID=842403:2;MATENM=6;NM=3;NUMPARTS=2;SCTG=c_19_12446001_12471001_17C;SPAN=1467;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:12:0:3.3:36.3,3.3,0:0:12:-36.31:36.31\n19\t12447413\t842403:2\tG\t]19:12445946]G\t36\tPASS\tDISC_MAPQ=58;EVDNC=ASDIS;HOMSEQ=GGCTAATTTTTTGTATTTTTAGTAGAGATGGGGTTTCACCGTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCACCTCGGCCTCCCAAAGTGCTGGGATTACAGG;MAPQ=60;MATEID=842403:1;MATENM=3;NM=6;NUMPARTS=2;SCTG=c_19_12446001_12471001_17C;SPAN=1467;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:12:0:3.3:36.3,3.3,0:0:12:-36.31:36.31\n19\t12584070\t842464:1\tA\tA[19:12588117[\t52\tPASS\tEVDNC=ASSMB;HOMSEQ=GCCTCCCA;MAPQ=60;MATEID=842464:2;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_19_12568501_12593501_6C;SPAN=4047;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:18:10:4.8:52.8,4.8,0:18:0:-52.81:52.81\n19\t12588117\t842464:2\tG\t]19:12584070]G\t52\tPASS\tEVDNC=ASSMB;HOMSEQ=GCCTCCCA;MAPQ=60;MATEID=842464:1;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_19_12568501_12593501_6C;SPAN=4047;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:18:10:4.8:52.8,4.8,0:18:0:-52.81:52.81\n19\t12677341\t842528:1\tA\t]19:12816052]A\t39\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=842528:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=19:12677341(-)-19:12816052(+)__19_12813501_12838501D;SPAN=138711;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:13:13:3.6:39.6,3.6,0:0:13:-39.61:39.61\n19\t12816052\t842528:2\tC\tC[19:12677341[\t39\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=842528:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=19:12677341(-)-19:12816052(+)__19_12813501_12838501D;SPAN=138711;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:13:13:3.6:39.6,3.6,0:0:13:-39.61:39.61\n19\t13737615\t842826:2\tT\t[6:147050431[T\t99\tPASS\tDISC_MAPQ=58;EVDNC=ASDIS;HOMSEQ=CCTGGCTAATTTTTGTATTTTTAGTAGAGA;INSERTION=AAGCCACCGTGTCCCGCCAGCATCCACCTGC;MAPQ=60;MATEID=842826:1;MATENM=1;NM=0;NUMPARTS=3;SCTG=c_19_13720001_13745001_137C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:38:14:10.5:115.5,10.5,0:37:7:-115.5:115.5\n19\t14621596\t843081:1\tT\tT[19:14623316[\t15\tPASS\tDISC_MAPQ=53;EVDNC=DSCRD;IMPRECISE;MAPQ=53;MATEID=843081:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=19:14621596(+)-19:14623316(-)__19_14602001_14627001D;SPAN=1720;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:52:15.2:15.2,0,114.2:0:9:-15.09:19.61\n19\t14623316\t843081:2\tA\t]19:14621596]A\t15\tPASS\tDISC_MAPQ=49;EVDNC=DSCRD;IMPRECISE;MAPQ=49;MATEID=843081:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=19:14621596(+)-19:14623316(-)__19_14602001_14627001D;SPAN=1720;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:52:15.2:15.2,0,114.2:0:9:-15.09:19.61\n19\t14935580\t843247:1\tT\tT[19:14938666[\t29\tPASS\tEVDNC=ASSMB;HOMSEQ=T;MAPQ=60;MATEID=843247:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_19_14920501_14945501_102C;SPAN=3086;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:24:29.6:29.6,0,29.6:11:0:-29.57:29.57\n19\t14938666\t843247:2\tT\t]19:14935580]T\t29\tPASS\tEVDNC=ASSMB;HOMSEQ=T;MAPQ=60;MATEID=843247:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_19_14920501_14945501_102C;SPAN=3086;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:24:29.6:29.6,0,29.6:11:0:-29.57:29.57\n19\t15675292\t843627:1\tT\t[19:15777541[T\t85\tPASS\tDISC_MAPQ=58;EVDNC=ASDIS;HOMSEQ=TGTCCACAGGTGCACAGGAGGCACTAGCACAGAACCTGGCATAAG;MAPQ=60;MATEID=843627:2;MATENM=3;NM=14;NUMPARTS=2;SCTG=c_19_15753501_15778501_69C;SPAN=102249;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:28:18:7.8:85.8,7.8,0:14:15:-85.82:85.82\n19\t15777541\t843627:2\tC\t[19:15675292[C\t85\tPASS\tDISC_MAPQ=51;EVDNC=ASDIS;HOMSEQ=TGTCCACAGGTGCACAGGAGGCACTAGCACAGAACCTGGCATAAG;MAPQ=60;MATEID=843627:1;MATENM=14;NM=3;NUMPARTS=2;SCTG=c_19_15753501_15778501_69C;SPAN=102249;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:28:18:7.8:85.8,7.8,0:14:15:-85.82:85.82\n19\t16256431\t843938:1\tC\t]19:16256542]C\t83\tPASS\tEVDNC=ASSMB;INSERTION=CTGATTAGCTGGGATCGCAGGCACATGTG;MAPQ=60;MATEID=843938:2;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_19_16243501_16268501_91C;SPAN=111;SUBN=2;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:29:42:21.2:83.9,0,21.2:29:0:-85.96:85.96\n19\t16256542\t843938:2\tC\tC[19:16256431[\t83\tPASS\tEVDNC=ASSMB;INSERTION=CTGATTAGCTGGGATCGCAGGCACATGTG;MAPQ=60;MATEID=843938:1;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_19_16243501_16268501_91C;SPAN=111;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:29:42:21.2:83.9,0,21.2:29:0:-85.96:85.96\n19\t17722273\t844421:1\tG\t]19:17722440]G\t27\tPASS\tEVDNC=ASSMB;HOMSEQ=GA;MAPQ=60;MATEID=844421:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_19_17713501_17738501_70C;SPAN=167;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:30:27.8:27.8,0,47.6:11:0:-27.88:28.16\n19\t17722440\t844421:2\tA\tA[19:17722273[\t27\tPASS\tEVDNC=ASSMB;HOMSEQ=GA;MAPQ=60;MATEID=844421:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_19_17713501_17738501_70C;SPAN=167;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:30:27.8:27.8,0,47.6:11:0:-27.88:28.16\n19\t17745327\t844424:1\tT\tT[19:17745972[\t42\tPASS\tDISC_MAPQ=57;EVDNC=ASDIS;HOMSEQ=AAAAATTAGCTGGGTGTGGTGGTGGGTGCCTGTAGTCCCAGCTACT;MAPQ=60;MATEID=844424:2;MATENM=2;NM=1;NUMPARTS=2;SCTG=c_19_17738001_17763001_74C;SPAN=645;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:14:11:3.9:42.9,3.9,0:7:8:-42.91:42.91\n19\t17745972\t844424:2\tA\t]19:17745327]A\t42\tPASS\tDISC_MAPQ=53;EVDNC=ASDIS;HOMSEQ=AAAAATTAGCTGGGTGTGGTGGTGGGTGCCTGTAGTCCCAGCTACT;MAPQ=60;MATEID=844424:1;MATENM=1;NM=2;NUMPARTS=2;SCTG=c_19_17738001_17763001_74C;SPAN=645;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:14:11:3.9:42.9,3.9,0:7:8:-42.91:42.91\n19\t18052042\t844540:1\tG\t]19:18069225]G\t12\tPASS\tDISC_MAPQ=255;EVDNC=ASDIS;HOMSEQ=G;MAPQ=60;MATEID=844540:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_19_18056501_18081501_131C;SPAN=17183;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:5:15:12.2:12.2,0,25.4:4:2:-12.29:12.54\n19\t18069225\t844540:2\tG\tG[19:18052042[\t12\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=G;MAPQ=60;MATEID=844540:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_19_18056501_18081501_131C;SPAN=17183;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:5:15:12.2:12.2,0,25.4:4:2:-12.29:12.54\n19\t19147213\t844918:1\tA\tA[19:19147484[\t47\tPASS\tEVDNC=ASSMB;HOMSEQ=AGGA;MAPQ=60;MATEID=844918:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_19_19134501_19159501_81C;SPAN=271;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:16:20:1.1:47.3,0,1.1:16:0:-49.48:49.48\n19\t19147484\t844918:2\tA\t]19:19147213]A\t47\tPASS\tEVDNC=ASSMB;HOMSEQ=AGGA;MAPQ=60;MATEID=844918:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_19_19134501_19159501_81C;SPAN=271;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:16:20:1.1:47.3,0,1.1:16:0:-49.48:49.48\n19\t20065920\t845168:1\tT\tT[19:20066218[\t69\tPASS\tEVDNC=ASSMB;HOMSEQ=TCAATCTATTCCT;MAPQ=60;MATEID=845168:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_19_20065501_20090501_12C;SPAN=298;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:23:22:6.3:69.3,6.3,0:23:0:-69.32:69.32\n19\t20066218\t845168:2\tT\t]19:20065920]T\t69\tPASS\tEVDNC=ASSMB;HOMSEQ=TCAATCTATTCCT;MAPQ=60;MATEID=845168:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_19_20065501_20090501_12C;SPAN=298;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:23:22:6.3:69.3,6.3,0:23:0:-69.32:69.32\n19\t20618462\t845443:1\tA\tA]19:20701122]\t26\tPASS\tDISC_MAPQ=51;EVDNC=DSCRD;IMPRECISE;MAPQ=51;MATEID=845443:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=19:20618462(+)-19:20701122(+)__19_20678001_20703001D;SPAN=82660;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:24:26.3:26.3,0,32.9:0:10:-26.26:26.32\n19\t20619278\t845444:1\tG\t[19:20700182[G\t59\tPASS\tDISC_MAPQ=29;EVDNC=DSCRD;IMPRECISE;MAPQ=29;MATEID=845444:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=19:20619278(-)-19:20700182(-)__19_20678001_20703001D;SPAN=80904;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:19:22:2.7:59.4,2.7,0:0:19:-60.34:60.34\n19\t20700182\t845444:2\tT\t[19:20619278[T\t59\tPASS\tDISC_MAPQ=56;EVDNC=DSCRD;IMPRECISE;MAPQ=56;MATEID=845444:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=19:20619278(-)-19:20700182(-)__19_20678001_20703001D;SPAN=80904;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:19:22:2.7:59.4,2.7,0:0:19:-60.34:60.34\n19\t20701122\t845443:2\tT\tT]19:20618462]\t26\tPASS\tDISC_MAPQ=33;EVDNC=DSCRD;IMPRECISE;MAPQ=33;MATEID=845443:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=19:20618462(+)-19:20701122(+)__19_20678001_20703001D;SPAN=82660;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:24:26.3:26.3,0,32.9:0:10:-26.26:26.32\n19\t21089889\t845809:1\tA\t]19:21151960]A\t32\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AGAAATTTGTACACTTTTGCCAGCATGCCAGGCTTCTGGG;MAPQ=60;MATEID=845809:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_19_21143501_21168501_7C;SPAN=62071;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:15:5.6:32,0,5.6:10:2:-33.15:33.15\n19\t21136664\t845806:1\tT\tT[19:21136820[\t20\tPASS\tEVDNC=ASSMB;HOMSEQ=AGAAT;MAPQ=60;MATEID=845806:2;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_19_21119001_21144001_97C;SPAN=156;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:21:20.6:20.6,0,30.5:8:0:-20.51:20.65\n19\t21136820\t845806:2\tA\t]19:21136664]A\t20\tPASS\tEVDNC=ASSMB;HOMSEQ=AGAAT;MAPQ=60;MATEID=845806:1;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_19_21119001_21144001_97C;SPAN=156;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:21:20.6:20.6,0,30.5:8:0:-20.51:20.65\n19\t21151960\t845809:2\tG\tG[19:21089889[\t32\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AGAAATTTGTACACTTTTGCCAGCATGCCAGGCTTCTGGG;MAPQ=60;MATEID=845809:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_19_21143501_21168501_7C;SPAN=62071;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:15:5.6:32,0,5.6:10:2:-33.15:33.15\n19\t21720254\t846251:1\tT\tT[19:21722766[\t23\tPASS\tEVDNC=ASSMB;HOMSEQ=TGTTAT;MAPQ=60;MATEID=846251:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_19_21707001_21732001_71C;SPAN=2512;SUBN=2;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:22:23.6:23.6,0,30.2:9:0:-23.53:23.59\n19\t21722766\t846251:2\tT\t]19:21720254]T\t23\tPASS\tEVDNC=ASSMB;HOMSEQ=TGTTAT;MAPQ=60;MATEID=846251:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_19_21707001_21732001_71C;SPAN=2512;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:22:23.6:23.6,0,30.2:9:0:-23.53:23.59\n19\t22958074\t846898:1\tC\tC[19:22960117[\t46\tPASS\tDISC_MAPQ=57;EVDNC=DSCRD;IMPRECISE;MAPQ=57;MATEID=846898:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=19:22958074(+)-19:22960117(-)__19_22956501_22981501D;SPAN=2043;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:16:1:4.2:46.2,4.2,0:0:16:-46.21:46.21\n19\t22960117\t846898:2\tC\t]19:22958074]C\t46\tPASS\tDISC_MAPQ=55;EVDNC=DSCRD;IMPRECISE;MAPQ=55;MATEID=846898:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=19:22958074(+)-19:22960117(-)__19_22956501_22981501D;SPAN=2043;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:16:1:4.2:46.2,4.2,0:0:16:-46.21:46.21\n19\t23379925\t847308:1\tA\tA]19:23799606]\t26\tPASS\tDISC_MAPQ=38;EVDNC=DSCRD;IMPRECISE;MAPQ=38;MATEID=847308:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=19:23379925(+)-19:23799606(+)__19_23789501_23814501D;SPAN=419681;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:9:5:2.4:26.4,2.4,0:0:9:-26.41:26.41\n19\t23622991\t847128:1\tC\tC[19:23625506[\t66\tPASS\tDISC_MAPQ=51;EVDNC=ASDIS;HOMSEQ=GGGTTCAAGCAATTCTCCTGCCTCAGCCTCCC;MAPQ=60;MATEID=847128:2;MATENM=3;NM=2;NUMPARTS=2;SCTG=c_19_23618001_23643001_15C;SPAN=2515;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:22:6:6:66,6,0:13:14:-66.02:66.02\n19\t23625506\t847128:2\tG\t]19:23622991]G\t66\tPASS\tDISC_MAPQ=48;EVDNC=ASDIS;HOMSEQ=GGGTTCAAGCAATTCTCCTGCCTCAGCCTCCC;MAPQ=60;MATEID=847128:1;MATENM=2;NM=3;NUMPARTS=2;SCTG=c_19_23618001_23643001_15C;SPAN=2515;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:22:6:6:66,6,0:13:14:-66.02:66.02\n19\t23753137\t847263:1\tG\t]19:23753636]G\t91\tPASS\tDISC_MAPQ=51;EVDNC=ASDIS;HOMSEQ=GCCTGTAATCCCAGCACTTTGGGAGGCTGAGGCAGG;MAPQ=60;MATEID=847263:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_19_23740501_23765501_17C;SPAN=499;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:31:39:5.6:91.4,0,5.6:22:16:-95.68:95.68\n19\t23753636\t847263:2\tG\tG[19:23753137[\t91\tPASS\tDISC_MAPQ=57;EVDNC=ASDIS;HOMSEQ=GCCTGTAATCCCAGCACTTTGGGAGGCTGAGGCAGG;MAPQ=60;MATEID=847263:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_19_23740501_23765501_17C;SPAN=499;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:31:39:5.6:91.4,0,5.6:22:16:-95.68:95.68\n19\t23799606\t847308:2\tA\tA]19:23379925]\t26\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=847308:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=19:23379925(+)-19:23799606(+)__19_23789501_23814501D;SPAN=419681;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:9:5:2.4:26.4,2.4,0:0:9:-26.41:26.41\n19\t23845125\t847363:2\tC\tC]1:28189261]\t23\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=847363:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:28189261(+)-19:23845125(+)__19_23838501_23863501D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:22:23.6:23.6,0,30.2:0:9:-23.53:23.59\n19\t23872785\t847437:1\tT\tT[19:23967785[\t44\tPASS\tDISC_MAPQ=58;EVDNC=DSCRD;IMPRECISE;MAPQ=58;MATEID=847437:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=19:23872785(+)-19:23967785(-)__19_23961001_23986001D;SPAN=95000;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:15:20:4.4:44,0,4.4:0:15:-45.49:45.49\n19\t23873150\t847438:1\tA\t]19:23968297]A\t75\tPASS\tDISC_MAPQ=59;EVDNC=DSCRD;IMPRECISE;MAPQ=59;MATEID=847438:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=19:23873150(-)-19:23968297(+)__19_23961001_23986001D;SPAN=95147;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:25:17:6.9:75.9,6.9,0:0:25:-75.92:75.92\n19\t23967785\t847437:2\tG\t]19:23872785]G\t44\tPASS\tDISC_MAPQ=58;EVDNC=DSCRD;IMPRECISE;MAPQ=58;MATEID=847437:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=19:23872785(+)-19:23967785(-)__19_23961001_23986001D;SPAN=95000;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:15:20:4.4:44,0,4.4:0:15:-45.49:45.49\n19\t23968297\t847438:2\tA\tA[19:23873150[\t75\tPASS\tDISC_MAPQ=57;EVDNC=DSCRD;IMPRECISE;MAPQ=57;MATEID=847438:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=19:23873150(-)-19:23968297(+)__19_23961001_23986001D;SPAN=95147;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:25:17:6.9:75.9,6.9,0:0:25:-75.92:75.92\n19\t24358987\t847575:1\tT\tT[19:24359111[\t99\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=GCATTGAGGCCTATGGTGAAAAAGGAAATATCT;MAPQ=60;MATEID=847575:2;MATENM=2;NM=3;NUMPARTS=2;SCTG=c_19_24353001_24378001_44C;SPAN=124;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:34:46:13.7:99.5,0,13.7:29:5:-102.7:102.7\n19\t24359111\t847575:2\tG\t]19:24358987]G\t99\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=GCATTGAGGCCTATGGTGAAAAAGGAAATATCT;MAPQ=60;MATEID=847575:1;MATENM=3;NM=2;NUMPARTS=2;SCTG=c_19_24353001_24378001_44C;SPAN=124;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:34:46:13.7:99.5,0,13.7:29:5:-102.7:102.7\n19\t24895890\t847832:1\tN\t]19:24896879]N\t16\tPASS\tDISC_MAPQ=44;EVDNC=DSCRD;IMPRECISE;MAPQ=44;MATEID=847832:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=19:24895890(-)-19:24896879(+)__19_24892001_24917001D;SPAN=989;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:47:16.7:16.7,0,99.2:0:9:-16.5:20.04\n19\t24896321\t847840:1\tA\t]19:24897433]A\t10\tPASS\tDISC_MAPQ=15;EVDNC=DSCRD;IMPRECISE;MAPQ=15;MATEID=847840:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=19:24896321(-)-19:24897433(+)__19_24892001_24917001D;SPAN=1112;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:16:150:10.6:10.6,0,367.1:0:16:-10.65:31.23\n19\t24896648\t847842:1\tC\tC[19:24897605[\t6\tPASS\tDISC_MAPQ=15;EVDNC=DSCRD;IMPRECISE;MAPQ=15;MATEID=847842:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=19:24896648(+)-19:24897605(-)__19_24892001_24917001D;SPAN=957;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:129:6.8:6.8,0,317:0:13:-6.652:25.03\n19\t24896879\t847832:2\tG\tG[19:24895890[\t16\tPASS\tDISC_MAPQ=35;EVDNC=DSCRD;IMPRECISE;MAPQ=35;MATEID=847832:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=19:24895890(-)-19:24896879(+)__19_24892001_24917001D;SPAN=989;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:47:16.7:16.7,0,99.2:0:9:-16.5:20.04\n19\t24896904\t847754:2\tA\tA[5:47172599[\t41\tPASS\tDISC_MAPQ=45;EVDNC=DSCRD;IMPRECISE;MAPQ=45;MATEID=847754:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=5:47172599(-)-19:24896904(+)__19_24892001_24917001D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:17:54:41:41,0,93.8:0:17:-40.94:42.13\n19\t24897340\t847848:1\tT\t]19:27249403]T\t99\tPASS\tDISC_MAPQ=46;EVDNC=ASDIS;HOMSEQ=TTCCTTTAGACAGAGCAGATTTGAAACACTCTTTTTGTGGAATTTG;MAPQ=60;MATEID=847848:2;MATENM=12;NM=1;NUMPARTS=2;SCTG=c_19_24892001_24917001_37C;SPAN=2352063;SUBN=1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:60:90:53.9:172.7,0,53.9:52:10:-176.2:176.2\n19\t24897433\t847840:2\tA\tA[19:24896321[\t10\tPASS\tDISC_MAPQ=39;EVDNC=DSCRD;IMPRECISE;MAPQ=39;MATEID=847840:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=19:24896321(-)-19:24897433(+)__19_24892001_24917001D;SPAN=1112;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:16:150:10.6:10.6,0,367.1:0:16:-10.65:31.23\n19\t24897605\t847842:2\tT\t]19:24896648]T\t6\tPASS\tDISC_MAPQ=29;EVDNC=DSCRD;IMPRECISE;MAPQ=29;MATEID=847842:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=19:24896648(+)-19:24897605(-)__19_24892001_24917001D;SPAN=957;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:129:6.8:6.8,0,317:0:13:-6.652:25.03\n19\t27240874\t847883:2\tN\t]16:36353193]N\t26\tPASS\tDISC_MAPQ=42;EVDNC=DSCRD;IMPRECISE;MAPQ=42;MATEID=847883:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=16:36353193(+)-19:27240874(-)__19_27219501_27244501D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:9:3:2.4:26.4,2.4,0:0:9:-26.41:26.41\n19\t27249403\t847848:2\tG\tG[19:24897340[\t99\tPASS\tDISC_MAPQ=2;EVDNC=ASDIS;HOMSEQ=TTCCTTTAGACAGAGCAGATTTGAAACACTCTTTTTGTGGAATTTG;MAPQ=60;MATEID=847848:1;MATENM=1;NM=12;NUMPARTS=2;SCTG=c_19_24892001_24917001_37C;SPAN=2352063;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:60:90:53.9:172.7,0,53.9:52:10:-176.2:176.2\n19\t27310510\t848031:1\tA\t]19:27315694]A\t99\tPASS\tDISC_MAPQ=58;EVDNC=ASDIS;HOMSEQ=AGTTGAACCTATCTTTTGATAGAGCAGTTTTGAAACTCTCTTTTTGTAGAATCTCCAAGTGGATA;MAPQ=60;MATEID=848031:2;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_19_27293001_27318001_61C;SPAN=5184;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:37:36:10.2:112.2,10.2,0:22:18:-112.2:112.2\n19\t27315694\t848031:2\tA\tA[19:27310510[\t99\tPASS\tDISC_MAPQ=56;EVDNC=ASDIS;HOMSEQ=AGTTGAACCTATCTTTTGATAGAGCAGTTTTGAAACTCTCTTTTTGTAGAATCTCCAAGTGGATA;MAPQ=60;MATEID=848031:1;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_19_27293001_27318001_61C;SPAN=5184;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:37:36:10.2:112.2,10.2,0:22:18:-112.2:112.2\n19\t27339321\t848102:1\tT\t]19:27339693]T\t33\tPASS\tDISC_MAPQ=50;EVDNC=ASDIS;HOMSEQ=TTTCCAAACTTCTCAATCAAAAGAAAGGTTC;MAPQ=60;MATEID=848102:2;MATENM=3;NM=5;NUMPARTS=2;SCTG=c_19_27317501_27342501_13C;SPAN=372;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:22:139:33.8:33.8,0,314.3:22:2:-33.55:46.99\n19\t27339693\t848102:2\tC\tC[19:27339321[\t33\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TTTCCAAACTTCTCAATCAAAAGAAAGGTTC;MAPQ=60;MATEID=848102:1;MATENM=5;NM=3;NUMPARTS=2;SCTG=c_19_27317501_27342501_13C;SPAN=372;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:22:139:33.8:33.8,0,314.3:22:2:-33.55:46.99\n19\t27363523\t848281:1\tG\tG[19:27397934[\t99\tPASS\tDISC_MAPQ=56;EVDNC=ASDIS;HOMSEQ=ATGTGAAGATATTTCCTTTTTCACCATAG;MAPQ=60;MATEID=848281:2;MATENM=2;NM=8;NUMPARTS=2;SCTG=c_19_27342001_27367001_569C;SPAN=34411;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:55:47:15.3:168.3,15.3,0:39:19:-168.3:168.3\n19\t27365941\t876115:1\tT\t[20:30926139[T\t68\tPASS\tDISC_MAPQ=255;EVDNC=TSI_L;HOMSEQ=TGCATATTCTACAGAAAGACTGTTTCCAAA;MAPQ=60;MATEID=876115:2;MATENM=5;NM=0;NUMPARTS=3;REPSEQ=TT;SCTG=c_20_30919001_30944001_257C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:29:98:68.3:68.3,0,177.2:26:4:-68.18:70.92\n19\t27377200\t848414:1\tG\tG[19:27377491[\t99\tPASS\tDISC_MAPQ=55;EVDNC=ASDIS;HOMSEQ=GAAATATCTTCACATAAAAACTACACAGAAGCATTCTGAGAAACTTCCTTG;MAPQ=60;MATEID=848414:2;MATENM=3;NM=10;NUMPARTS=2;SCTG=c_19_27366501_27391501_648C;SPAN=291;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:41:79:83.6:113.3,0,83.6:18:23:-113.3:113.3\n19\t27377491\t848414:2\tG\t]19:27377200]G\t99\tPASS\tDISC_MAPQ=54;EVDNC=ASDIS;HOMSEQ=GAAATATCTTCACATAAAAACTACACAGAAGCATTCTGAGAAACTTCCTTG;MAPQ=60;MATEID=848414:1;MATENM=10;NM=3;NUMPARTS=2;SCTG=c_19_27366501_27391501_648C;SPAN=291;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:41:79:83.6:113.3,0,83.6:18:23:-113.3:113.3\n19\t27388979\t848453:1\tT\tT[19:27389239[\t6\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=848453:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_19_27366501_27391501_76C;SPAN=260;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:96:6.2:6.2,0,233.9:10:0:-6.025:19.41\n19\t27389239\t848453:2\tT\t]19:27388979]T\t6\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=848453:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_19_27366501_27391501_76C;SPAN=260;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:96:6.2:6.2,0,233.9:10:0:-6.025:19.41\n19\t27390865\t848460:1\tG\tG[19:27391462[\t99\tPASS\tDISC_MAPQ=56;EVDNC=ASDIS;HOMSEQ=ATATTTGGAGCGCTTTGAGGTCTATGGTGAAAAAGGAACTATCTTCACATTAAACCTAGACAGAATGATTCTGAGAAACTTCTTTG;MAPQ=60;MATEID=848460:2;MATENM=9;NM=8;NUMPARTS=2;SCTG=c_19_27366501_27391501_740C;SPAN=597;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:65:48:18:198,18,0:21:49:-198:198\n19\t27391462\t848460:2\tA\t]19:27390865]A\t99\tPASS\tDISC_MAPQ=49;EVDNC=ASDIS;HOMSEQ=ATATTTGGAGCGCTTTGAGGTCTATGGTGAAAAAGGAACTATCTTCACATTAAACCTAGACAGAATGATTCTGAGAAACTTCTTTG;MAPQ=60;MATEID=848460:1;MATENM=8;NM=9;NUMPARTS=2;SCTG=c_19_27366501_27391501_740C;SPAN=597;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:65:48:18:198,18,0:21:49:-198:198\n19\t27397934\t848281:2\tA\t]19:27363523]A\t99\tPASS\tDISC_MAPQ=255;EVDNC=ASDIS;HOMSEQ=ATGTGAAGATATTTCCTTTTTCACCATAG;MAPQ=60;MATEID=848281:1;MATENM=8;NM=2;NUMPARTS=2;SCTG=c_19_27342001_27367001_569C;SPAN=34411;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:55:47:15.3:168.3,15.3,0:39:19:-168.3:168.3\n19\t27470475\t848602:1\tA\tA[19:27472339[\t82\tPASS\tEVDNC=ASSMB;HOMSEQ=CTTTTACACCATAGGCCTCA;MAPQ=60;MATEID=848602:2;MATENM=3;NM=2;NUMPARTS=2;SCTG=c_19_27464501_27489501_4C;SPAN=1864;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:27:12:7.5:82.5,7.5,0:27:0:-82.52:82.52\n19\t27472339\t848602:2\tC\t]19:27470475]C\t82\tPASS\tEVDNC=ASSMB;HOMSEQ=CTTTTACACCATAGGCCTCA;MAPQ=60;MATEID=848602:1;MATENM=2;NM=3;NUMPARTS=2;SCTG=c_19_27464501_27489501_4C;SPAN=1864;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:27:12:7.5:82.5,7.5,0:27:0:-82.52:82.52\n19\t29459396\t849209:1\tT\tT[19:29465260[\t42\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=849209:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=19:29459396(+)-19:29465260(-)__19_29449001_29474001D;SPAN=5864;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:14:10:3.9:42.9,3.9,0:0:14:-42.91:42.91\n19\t29465260\t849209:2\tA\t]19:29459396]A\t42\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=849209:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=19:29459396(+)-19:29465260(-)__19_29449001_29474001D;SPAN=5864;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:14:10:3.9:42.9,3.9,0:0:14:-42.91:42.91\n19\t29897897\t849377:1\tT\tT[19:29902194[\t79\tPASS\tEVDNC=ASSMB;HOMSEQ=TAATTTTTATTTTT;MAPQ=60;MATEID=849377:2;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_19_29890001_29915001_36C;SPAN=4297;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:24:26:7.2:79.2,7.2,0:24:0:-78.56:78.56\n19\t29902194\t849377:2\tT\t]19:29897897]T\t79\tPASS\tEVDNC=ASSMB;HOMSEQ=TAATTTTTATTTTT;MAPQ=60;MATEID=849377:1;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_19_29890001_29915001_36C;SPAN=4297;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:24:26:7.2:79.2,7.2,0:24:0:-78.56:78.56\n19\t30526433\t849550:1\tC\tC[19:30526744[\t58\tPASS\tEVDNC=ASSMB;HOMSEQ=AAGAAC;MAPQ=60;MATEID=849550:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_19_30502501_30527501_43C;SPAN=311;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:20:27:8.9:58.4,0,8.9:20:0:-60.44:60.44\n19\t30526744\t849550:2\tA\t]19:30526433]A\t58\tPASS\tEVDNC=ASSMB;HOMSEQ=AAGAAC;MAPQ=60;MATEID=849550:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_19_30502501_30527501_43C;SPAN=311;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:20:27:8.9:58.4,0,8.9:20:0:-60.44:60.44\n19\t32019277\t669546:2\tA\tA[13:49318685[\t49\tPASS\tDISC_MAPQ=7;EVDNC=ASDIS;MAPQ=60;MATEID=669546:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_13_49294001_49319001_26C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:17:7:4.5:49.5,4.5,0:14:5:-49.51:49.51\n19\t32596050\t850106:1\tC\t]19:32596653]C\t36\tPASS\tDISC_MAPQ=59;EVDNC=DSCRD;IMPRECISE;MAPQ=59;MATEID=850106:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=19:32596050(-)-19:32596653(+)__19_32585001_32610001D;SPAN=603;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:22:17:36.8,0,17:0:13:-37.05:37.05\n19\t32596653\t850106:2\tA\tA[19:32596050[\t36\tPASS\tDISC_MAPQ=56;EVDNC=DSCRD;IMPRECISE;MAPQ=56;MATEID=850106:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=19:32596050(-)-19:32596653(+)__19_32585001_32610001D;SPAN=603;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:22:17:36.8,0,17:0:13:-37.05:37.05\n19\t33249724\t850374:1\tA\t]19:33250465]A\t63\tPASS\tDISC_MAPQ=30;EVDNC=DSCRD;IMPRECISE;MAPQ=30;MATEID=850374:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=19:33249724(-)-19:33250465(+)__19_33246501_33271501D;SPAN=741;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:23:44:47:63.5,0,47:0:23:-63.68:63.68\n19\t33250465\t850374:2\tC\tC[19:33249724[\t63\tPASS\tDISC_MAPQ=49;EVDNC=DSCRD;IMPRECISE;MAPQ=49;MATEID=850374:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=19:33249724(-)-19:33250465(+)__19_33246501_33271501D;SPAN=741;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:23:44:47:63.5,0,47:0:23:-63.68:63.68\n19\t34392184\t850796:1\tT\t]Un_KN707807v1_decoy:4616]T\t44\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=850796:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_19_34373501_34398501_126C;SPAN=-1;SUBN=1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:16:32:34.1:44,0,34.1:16:0:-43.85:43.85\n19\t36555293\t851508:1\tT\tT[19:36555596[\t52\tPASS\tEVDNC=ASSMB;HOMSEQ=GCGATAAAGTTTTT;MAPQ=60;MATEID=851508:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_19_36554001_36579001_38C;SPAN=303;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:18:16:4.8:52.8,4.8,0:18:0:-52.81:52.81\n19\t36555596\t851508:2\tG\t]19:36555293]G\t52\tPASS\tEVDNC=ASSMB;HOMSEQ=GCGATAAAGTTTTT;MAPQ=60;MATEID=851508:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_19_36554001_36579001_38C;SPAN=303;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:18:16:4.8:52.8,4.8,0:18:0:-52.81:52.81\n19\t38146650\t852018:1\tC\t]19:38163477]C\t45\tPASS\tDISC_MAPQ=57;EVDNC=ASDIS;HOMSEQ=CAGAGTG;MAPQ=60;MATEID=852018:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_19_38146501_38171501_2C;SPAN=16827;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:16:27:22.1:45.2,0,22.1:11:12:-45.63:45.63\n19\t38163477\t852018:2\tG\tG[19:38146650[\t45\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=CAGAGTG;MAPQ=60;MATEID=852018:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_19_38146501_38171501_2C;SPAN=16827;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:16:27:22.1:45.2,0,22.1:11:12:-45.63:45.63\n19\t39766920\t852503:1\tT\tT[19:39767211[\t18\tPASS\tEVDNC=ASSMB;HOMSEQ=GCATCAGCGATATTTT;MAPQ=60;MATEID=852503:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_19_39763501_39788501_48C;SPAN=291;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:7:16:18.8:18.8,0,18.8:7:0:-18.61:18.62\n19\t39767211\t852503:2\tG\t]19:39766920]G\t18\tPASS\tEVDNC=ASSMB;HOMSEQ=GCATCAGCGATATTTT;MAPQ=60;MATEID=852503:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_19_39763501_39788501_48C;SPAN=291;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:7:16:18.8:18.8,0,18.8:7:0:-18.61:18.62\n19\t40107197\t852673:1\tT\tT[19:40109854[\t40\tPASS\tEVDNC=ASSMB;HOMSEQ=CCAATTAATAGTTTT;MAPQ=60;MATEID=852673:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_19_40106501_40131501_40C;SPAN=2657;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:15:34:40.1:40.1,0,43.4:15:0:-39.96:39.98\n19\t40109854\t852673:2\tC\t]19:40107197]C\t40\tPASS\tEVDNC=ASSMB;HOMSEQ=CCAATTAATAGTTTT;MAPQ=60;MATEID=852673:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_19_40106501_40131501_40C;SPAN=2657;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:15:34:40.1:40.1,0,43.4:15:0:-39.96:39.98\n19\t41102820\t852998:1\tC\tC[19:41104286[\t47\tPASS\tEVDNC=ASSMB;HOMSEQ=AGAAAACCCCAACATCTC;MAPQ=60;MATEID=852998:2;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_19_41086501_41111501_76C;SPAN=1466;SUBN=1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:16:21:4.1:47,0,4.1:16:0:-48.75:48.75\n19\t41104286\t852998:2\tA\t]19:41102820]A\t47\tPASS\tEVDNC=ASSMB;HOMSEQ=AGAAAACCCCAACATCTC;MAPQ=60;MATEID=852998:1;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_19_41086501_41111501_76C;SPAN=1466;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:16:21:4.1:47,0,4.1:16:0:-48.75:48.75\n19\t41643872\t853216:1\tG\tG[19:41646305[\t72\tPASS\tEVDNC=ASSMB;HOMSEQ=AAGATATAAGATTAG;MAPQ=60;MATEID=853216:2;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_19_41625501_41650501_37C;SPAN=2433;SUBN=2;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:24:15:6.6:72.6,6.6,0:24:0:-72.62:72.62\n19\t41646305\t853216:2\tA\t]19:41643872]A\t72\tPASS\tEVDNC=ASSMB;HOMSEQ=AAGATATAAGATTAG;MAPQ=60;MATEID=853216:1;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_19_41625501_41650501_37C;SPAN=2433;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:24:15:6.6:72.6,6.6,0:24:0:-72.62:72.62\n19\t41803700\t853279:1\tT\tT[19:41807214[\t47\tPASS\tEVDNC=ASSMB;INSERTION=A;MAPQ=60;MATEID=853279:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_19_41797001_41822001_21C;SPAN=3514;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:17:30:27.8:47.6,0,27.8:17:0:-47.96:47.96\n19\t41803763\t853281:1\tG\t]19:41807383]G\t69\tPASS\tEVDNC=ASSMB;INSERTION=CCCA;MAPQ=60;MATEID=853281:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_19_41797001_41822001_4C;SPAN=3620;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:24:34:13.7:69.8,0,13.7:24:0:-71.56:71.56\n19\t41807214\t853279:2\tC\t]19:41803700]C\t47\tPASS\tEVDNC=ASSMB;INSERTION=A;MAPQ=60;MATEID=853279:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_19_41797001_41822001_21C;SPAN=3514;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:17:30:27.8:47.6,0,27.8:17:0:-47.96:47.96\n19\t41807383\t853281:2\tG\tG[19:41803763[\t69\tPASS\tEVDNC=ASSMB;INSERTION=CCCA;MAPQ=60;MATEID=853281:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_19_41797001_41822001_4C;SPAN=3620;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:24:34:13.7:69.8,0,13.7:24:0:-71.56:71.56\n19\t43679334\t853729:1\tT\t]19:43679927]T\t99\tPASS\tDISC_MAPQ=55;EVDNC=ASDIS;HOMSEQ=TGGTGG;MAPQ=60;MATEID=853729:2;MATENM=5;NM=1;NUMPARTS=2;SCTG=c_19_43659001_43684001_3C;SPAN=593;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:46:63:22.1:134.3,0,22.1:35:23:-138.4:138.4\n19\t43679927\t853729:2\tG\tG[19:43679334[\t99\tPASS\tDISC_MAPQ=49;EVDNC=ASDIS;HOMSEQ=TGGTGG;MAPQ=60;MATEID=853729:1;MATENM=1;NM=5;NUMPARTS=2;SCTG=c_19_43659001_43684001_3C;SPAN=593;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:46:63:22.1:134.3,0,22.1:35:23:-138.4:138.4\n19\t44546246\t854019:1\tT\tT[19:44546891[\t56\tPASS\tEVDNC=ASSMB;HOMSEQ=GGTGGCATATAATATTTTT;MAPQ=60;MATEID=854019:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_19_44541001_44566001_22C;SPAN=645;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:23:70:56.3:56.3,0,119:23:0:-56.25:57.52\n19\t44546891\t854019:2\tG\t]19:44546246]G\t56\tPASS\tEVDNC=ASSMB;HOMSEQ=GGTGGCATATAATATTTTT;MAPQ=60;MATEID=854019:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_19_44541001_44566001_22C;SPAN=645;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:23:70:56.3:56.3,0,119:23:0:-56.25:57.52\n19\t45635085\t854386:1\tA\tA[19:45635362[\t35\tPASS\tEVDNC=ASSMB;HOMSEQ=CTCCTGACCTCA;MAPQ=60;MATEID=854386:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_19_45619001_45644001_40C;SPAN=277;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:15:2.3:35.3,0,2.3:12:0:-37.11:37.11\n19\t45635362\t854386:2\tC\t]19:45635085]C\t35\tPASS\tEVDNC=ASSMB;HOMSEQ=CTCCTGACCTCA;MAPQ=60;MATEID=854386:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_19_45619001_45644001_40C;SPAN=277;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:15:2.3:35.3,0,2.3:12:0:-37.11:37.11\n19\t46275906\t854976:1\tG\t[19:47396150[G\t23\tPASS\tDISC_MAPQ=42;EVDNC=DSCRD;IMPRECISE;MAPQ=42;MATEID=854976:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=19:46275906(-)-19:47396150(-)__19_47383001_47408001D;SPAN=1120244;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:22:23.6:23.6,0,30.2:0:9:-23.53:23.59\n19\t47025044\t854871:1\tC\tC[19:47025446[\t82\tPASS\tDISC_MAPQ=53;EVDNC=ASDIS;HOMSEQ=TTTTGTATTTTTAGTAGAGATGGGGTTTCACCATGTTGGTCAGGCTGGTCTCAAACTCCTGACCTC;MAPQ=60;MATEID=854871:2;MATENM=2;NM=2;NUMPARTS=2;SCTG=c_19_47015501_47040501_6C;SPAN=402;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:27:5:7.5:82.5,7.5,0:15:18:-82.52:82.52\n19\t47025446\t854871:2\tT\t]19:47025044]T\t82\tPASS\tDISC_MAPQ=52;EVDNC=ASDIS;HOMSEQ=TTTTGTATTTTTAGTAGAGATGGGGTTTCACCATGTTGGTCAGGCTGGTCTCAAACTCCTGACCTC;MAPQ=60;MATEID=854871:1;MATENM=2;NM=2;NUMPARTS=2;SCTG=c_19_47015501_47040501_6C;SPAN=402;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:27:5:7.5:82.5,7.5,0:15:18:-82.52:82.52\n19\t47396150\t854976:2\tA\t[19:46275906[A\t23\tPASS\tDISC_MAPQ=33;EVDNC=DSCRD;IMPRECISE;MAPQ=33;MATEID=854976:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=19:46275906(-)-19:47396150(-)__19_47383001_47408001D;SPAN=1120244;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:22:23.6:23.6,0,30.2:0:9:-23.53:23.59\n19\t47419531\t996298:1\tT\t]Un_JTFH01000178v1_decoy:2767]T\t49\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=996298:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_1021_1_2767_3C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:17:5:4.5:49.5,4.5,0:17:0:-49.51:49.51\n19\t49078709\t855632:1\tT\tT[19:49079002[\t52\tPASS\tEVDNC=ASSMB;HOMSEQ=TATTTTATTTATTT;MAPQ=60;MATEID=855632:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_19_49073501_49098501_54C;SPAN=293;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:18:16:4.8:52.8,4.8,0:18:0:-52.81:52.81\n19\t49079002\t855632:2\tT\t]19:49078709]T\t52\tPASS\tEVDNC=ASSMB;HOMSEQ=TATTTTATTTATTT;MAPQ=60;MATEID=855632:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_19_49073501_49098501_54C;SPAN=293;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:18:16:4.8:52.8,4.8,0:18:0:-52.81:52.81\n19\t50574634\t856125:1\tT\tT[19:50579255[\t27\tPASS\tEVDNC=ASSMB;HOMSEQ=CT;MAPQ=60;MATEID=856125:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_19_50568001_50593001_52C;SPAN=4621;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:21:23.9:27.2,0,23.9:10:0:-27.11:27.11\n19\t50579255\t856125:2\tC\t]19:50574634]C\t27\tPASS\tEVDNC=ASSMB;HOMSEQ=CT;MAPQ=60;MATEID=856125:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_19_50568001_50593001_52C;SPAN=4621;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:21:23.9:27.2,0,23.9:10:0:-27.11:27.11\n19\t50901191\t856299:1\tC\t]19:50982831]C\t23\tPASS\tEVDNC=ASSMB;HOMSEQ=CCTCAG;MAPQ=60;MATEID=856299:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_19_50960001_50985001_105C;SPAN=81640;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:8:5:2.1:23.1,2.1,0:8:0:-23.11:23.11\n19\t50903593\t856267:1\tT\tT[19:50905076[\t72\tPASS\tDISC_MAPQ=55;EVDNC=ASDIS;HOMSEQ=GAGTAGCTGGGATTACAGGCACCTGCCACTATGCCTGGCTAATTTTGGTATTTTTAGTAGAGACGGGGTTTCACCATGTTGGCCAGGCTGGTCT;MAPQ=60;MATEID=856267:2;MATENM=0;NM=34;NUMPARTS=2;SCTG=c_19_50886501_50911501_46C;SPAN=1483;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:24:12:6.6:72.6,6.6,0:6:20:-72.62:72.62\n19\t50905076\t856267:2\tG\t]19:50903593]G\t72\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=GAGTAGCTGGGATTACAGGCACCTGCCACTATGCCTGGCTAATTTTGGTATTTTTAGTAGAGACGGGGTTTCACCATGTTGGCCAGGCTGGTCT;MAPQ=60;MATEID=856267:1;MATENM=34;NM=0;NUMPARTS=2;SCTG=c_19_50886501_50911501_46C;SPAN=1483;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:24:12:6.6:72.6,6.6,0:6:20:-72.62:72.62\n19\t50982831\t856299:2\tG\tG[19:50901191[\t23\tPASS\tEVDNC=ASSMB;HOMSEQ=CCTCAG;MAPQ=60;MATEID=856299:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_19_50960001_50985001_105C;SPAN=81640;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:8:5:2.1:23.1,2.1,0:8:0:-23.11:23.11\n19\t51273153\t856400:1\tT\tT[19:51273448[\t20\tPASS\tEVDNC=ASSMB;HOMSEQ=AAGAATTACCACAACTT;MAPQ=60;MATEID=856400:2;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_19_51254001_51279001_69C;SPAN=295;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:20:20.9:20.9,0,27.5:8:0:-20.79:20.87\n19\t51273448\t856400:2\tA\t]19:51273153]A\t20\tPASS\tEVDNC=ASSMB;HOMSEQ=AAGAATTACCACAACTT;MAPQ=60;MATEID=856400:1;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_19_51254001_51279001_69C;SPAN=295;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:20:20.9:20.9,0,27.5:8:0:-20.79:20.87\n19\t51672799\t856558:1\tG\tG[19:51674260[\t99\tPASS\tDISC_MAPQ=53;EVDNC=DSCRD;IMPRECISE;MAPQ=53;MATEID=856558:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=19:51672799(+)-19:51674260(-)__19_51670501_51695501D;SPAN=1461;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:35:7:9.6:105.6,9.6,0:0:35:-105.6:105.6\n19\t51674260\t856558:2\tA\t]19:51672799]A\t99\tPASS\tDISC_MAPQ=47;EVDNC=DSCRD;IMPRECISE;MAPQ=47;MATEID=856558:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=19:51672799(+)-19:51674260(-)__19_51670501_51695501D;SPAN=1461;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:35:7:9.6:105.6,9.6,0:0:35:-105.6:105.6\n19\t51825382\t856668:1\tT\t[19:52243049[T\t11\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;MAPQ=60;MATEID=856668:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_19_52234001_52259001_18C;SPAN=417667;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:5:17:11.9:11.9,0,28.4:2:3:-11.73:12.21\n19\t52243049\t856668:2\tG\t[19:51825382[G\t11\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;MAPQ=60;MATEID=856668:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_19_52234001_52259001_18C;SPAN=417667;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:5:17:11.9:11.9,0,28.4:2:3:-11.73:12.21\n19\t52350629\t856711:1\tG\tG[19:52350932[\t24\tPASS\tEVDNC=ASSMB;HOMSEQ=GGAGGCTGCAGTGAGCCAAG;MAPQ=60;MATEID=856711:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_19_52332001_52357001_48C;SPAN=303;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:43:24.2:24.2,0,83.6:11:0:-24.22:26.08\n19\t52350932\t856711:2\tG\t]19:52350629]G\t24\tPASS\tEVDNC=ASSMB;HOMSEQ=GGAGGCTGCAGTGAGCCAAG;MAPQ=60;MATEID=856711:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_19_52332001_52357001_48C;SPAN=303;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:43:24.2:24.2,0,83.6:11:0:-24.22:26.08\n19\t52592887\t856849:1\tA\tA[19:52594355[\t82\tPASS\tDISC_MAPQ=58;EVDNC=DSCRD;IMPRECISE;MAPQ=58;MATEID=856849:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=19:52592887(+)-19:52594355(-)__19_52577001_52602001D;SPAN=1468;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:27:7:7.5:82.5,7.5,0:0:27:-82.52:82.52\n19\t52594355\t856849:2\tA\t]19:52592887]A\t82\tPASS\tDISC_MAPQ=47;EVDNC=DSCRD;IMPRECISE;MAPQ=47;MATEID=856849:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=19:52592887(+)-19:52594355(-)__19_52577001_52602001D;SPAN=1468;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:27:7:7.5:82.5,7.5,0:0:27:-82.52:82.52\n19\t52918961\t857052:1\tT\tT[19:52920955[\t19\tPASS\tEVDNC=ASSMB;HOMSEQ=AAAAAAAAAAAAAATCT;MAPQ=60;MATEID=857052:2;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_19_52920001_52945001_46C;SPAN=1994;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:73:19.1:19.1,0,164.3:12:0:-19.09:25.85\n19\t52920955\t857052:2\tA\t]19:52918961]A\t19\tPASS\tEVDNC=ASSMB;HOMSEQ=AAAAAAAAAAAAAATCT;MAPQ=60;MATEID=857052:1;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_19_52920001_52945001_46C;SPAN=1994;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:73:19.1:19.1,0,164.3:12:0:-19.09:25.85\n19\t53185924\t857218:1\tT\tT[19:53188699[\t83\tPASS\tEVDNC=ASSMB;HOMSEQ=GGGTTTTT;MAPQ=60;MATEID=857218:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_19_53165001_53190001_68C;SPAN=2775;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:29:44:27.2:83.3,0,27.2:29:0:-84.92:84.92\n19\t53188699\t857218:2\tG\t]19:53185924]G\t83\tPASS\tEVDNC=ASSMB;HOMSEQ=GGGTTTTT;MAPQ=60;MATEID=857218:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_19_53165001_53190001_68C;SPAN=2775;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:29:44:27.2:83.3,0,27.2:29:0:-84.92:84.92\n19\t53433460\t857385:1\tC\tC[19:53470214[\t73\tPASS\tEVDNC=ASSMB;HOMSEQ=TGTCTGGAGCCCATTTCTTTGGCTTCGACTTCGC;MAPQ=60;MATEID=857385:2;MATENM=3;NM=0;NUMPARTS=2;SCTG=c_19_53459001_53484001_53C;SPAN=36754;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:25:33:7.4:73.4,0,7.4:25:0:-76.04:76.04\n19\t53442835\t857387:1\tG\t]19:53480335]G\t28\tPASS\tDISC_MAPQ=57;EVDNC=DSCRD;IMPRECISE;MAPQ=57;MATEID=857387:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=19:53442835(-)-19:53480335(+)__19_53459001_53484001D;SPAN=37500;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:16:8.9:28.7,0,8.9:0:10:-28.89:28.89\n19\t53470214\t857385:2\tT\t]19:53433460]T\t73\tPASS\tEVDNC=ASSMB;HOMSEQ=TGTCTGGAGCCCATTTCTTTGGCTTCGACTTCGC;MAPQ=60;MATEID=857385:1;MATENM=0;NM=3;NUMPARTS=2;SCTG=c_19_53459001_53484001_53C;SPAN=36754;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:25:33:7.4:73.4,0,7.4:25:0:-76.04:76.04\n19\t53480335\t857387:2\tT\tT[19:53442835[\t28\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=857387:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=19:53442835(-)-19:53480335(+)__19_53459001_53484001D;SPAN=37500;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:16:8.9:28.7,0,8.9:0:10:-28.89:28.89\n19\t54052300\t857659:1\tA\tA[19:54057389[\t56\tPASS\tEVDNC=ASSMB;HOMSEQ=CCTGTACTCCCAGCTACTTGGGAGGCTGA;MAPQ=60;MATEID=857659:2;MATENM=0;NM=4;NUMPARTS=2;SCTG=c_19_54047001_54072001_22C;SPAN=5089;SUBN=5;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:19:11:5.1:56.1,5.1,0:19:0:-56.11:56.11\n19\t54057389\t857659:2\tC\t]19:54052300]C\t56\tPASS\tEVDNC=ASSMB;HOMSEQ=CCTGTACTCCCAGCTACTTGGGAGGCTGA;MAPQ=60;MATEID=857659:1;MATENM=4;NM=0;NUMPARTS=2;SCTG=c_19_54047001_54072001_22C;SPAN=5089;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:19:11:5.1:56.1,5.1,0:19:0:-56.11:56.11\n19\t54964364\t858158:1\tC\t]19:54965577]C\t20\tPASS\tDISC_MAPQ=51;EVDNC=DSCRD;IMPRECISE;MAPQ=51;MATEID=858158:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=19:54964364(-)-19:54965577(+)__19_54953501_54978501D;SPAN=1213;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:32:20.9:20.9,0,57.2:0:9:-20.71:21.77\n19\t54965577\t858158:2\tT\tT[19:54964364[\t20\tPASS\tDISC_MAPQ=20;EVDNC=DSCRD;IMPRECISE;MAPQ=20;MATEID=858158:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=19:54964364(-)-19:54965577(+)__19_54953501_54978501D;SPAN=1213;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:32:20.9:20.9,0,57.2:0:9:-20.71:21.77\n19\t56963539\t859228:1\tG\tG[19:56964242[\t75\tPASS\tEVDNC=ASSMB;HOMSEQ=AG;MAPQ=60;MATEID=859228:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_19_56962501_56987501_14C;SPAN=703;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:25:22:6.9:75.9,6.9,0:25:0:-75.92:75.92\n19\t56964242\t859228:2\tA\t]19:56963539]A\t75\tPASS\tEVDNC=ASSMB;HOMSEQ=AG;MAPQ=60;MATEID=859228:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_19_56962501_56987501_14C;SPAN=703;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:25:22:6.9:75.9,6.9,0:25:0:-75.92:75.92\n19\t57824097\t859732:1\tT\tT]19:58014702]\t33\tPASS\tDISC_MAPQ=57;EVDNC=DSCRD;IMPRECISE;MAPQ=57;MATEID=859732:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=19:57824097(+)-19:58014702(+)__19_57991501_58016501D;SPAN=190605;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:11:6:3:33,3,0:0:11:-33.01:33.01\n19\t58014702\t859732:2\tG\tG]19:57824097]\t33\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=859732:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=19:57824097(+)-19:58014702(+)__19_57991501_58016501D;SPAN=190605;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:11:6:3:33,3,0:0:11:-33.01:33.01\n19\t58106421\t859805:1\tG\tG[19:58106734[\t89\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AAAGAAAAAAAGACATCTG;MAPQ=60;MATEID=859805:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_19_58089501_58114501_22C;SPAN=313;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:29:12:8.1:89.1,8.1,0:17:14:-89.12:89.12\n19\t58106734\t859805:2\tA\t]19:58106421]A\t89\tPASS\tDISC_MAPQ=58;EVDNC=ASDIS;HOMSEQ=AAAGAAAAAAAGACATCTG;MAPQ=60;MATEID=859805:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_19_58089501_58114501_22C;SPAN=313;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:29:12:8.1:89.1,8.1,0:17:14:-89.12:89.12\n20\t1408603\t860540:1\tT\tT[20:1410170[\t42\tPASS\tDISC_MAPQ=59;EVDNC=DSCRD;IMPRECISE;MAPQ=59;MATEID=860540:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=20:1408603(+)-20:1410170(-)__20_1396501_1421501D;SPAN=1567;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:14:4:3.9:42.9,3.9,0:0:14:-42.91:42.91\n20\t1410170\t860540:2\tA\t]20:1408603]A\t42\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=860540:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=20:1408603(+)-20:1410170(-)__20_1396501_1421501D;SPAN=1567;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:14:4:3.9:42.9,3.9,0:0:14:-42.91:42.91\n20\t2379056\t860744:1\tC\t]20:2379968]C\t92\tPASS\tDISC_MAPQ=51;EVDNC=ASDIS;INSERTION=TGAGG;MAPQ=60;MATEID=860744:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_2376501_2401501_11C;SPAN=912;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:29:31:8.4:92.4,8.4,0:22:20:-92.42:92.42\n20\t2379968\t860744:2\tG\tG[20:2379056[\t92\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;INSERTION=TGAGG;MAPQ=60;MATEID=860744:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_2376501_2401501_11C;SPAN=912;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:29:31:8.4:92.4,8.4,0:22:20:-92.42:92.42\n20\t2822516\t860836:1\tT\tT[20:2825764[\t40\tPASS\tEVDNC=ASSMB;HOMSEQ=AAAAGAACTTGATTT;MAPQ=60;MATEID=860836:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_2817501_2842501_19C;SPAN=3248;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:17:55:40.7:40.7,0,96.8:17:0:-40.66:41.96\n20\t2825764\t860836:2\tA\t]20:2822516]A\t40\tPASS\tEVDNC=ASSMB;HOMSEQ=AAAAGAACTTGATTT;MAPQ=60;MATEID=860836:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_2817501_2842501_19C;SPAN=3248;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:17:55:40.7:40.7,0,96.8:17:0:-40.66:41.96\n20\t3751228\t861147:1\tT\t]20:3886453]T\t49\tPASS\tDISC_MAPQ=58;EVDNC=ASDIS;HOMSEQ=TG;MAPQ=60;MATEID=861147:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_3871001_3896001_4C;SPAN=135225;SUBN=3;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:17:7:4.5:49.5,4.5,0:12:12:-49.51:49.51\n20\t3886453\t861147:2\tG\tG[20:3751228[\t49\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TG;MAPQ=60;MATEID=861147:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_3871001_3896001_4C;SPAN=135225;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:17:7:4.5:49.5,4.5,0:12:12:-49.51:49.51\n20\t4446666\t988141:1\tG\t]Un_KN707691v1_decoy:4885]G\t52\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=988141:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_542_1_4885_3C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:18:4:4.8:52.8,4.8,0:18:0:-52.81:52.81\n20\t4988872\t861527:1\tT\t]20:5120848]T\t20\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=861527:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_5120501_5145501_29C;SPAN=131976;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:7:11:6.8:20,0,6.8:7:0:-20.32:20.32\n20\t5120848\t861527:2\tC\tC[20:4988872[\t20\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=861527:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_5120501_5145501_29C;SPAN=131976;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:7:11:6.8:20,0,6.8:7:0:-20.32:20.32\n20\t5648405\t861660:1\tG\tG[20:5649718[\t33\tPASS\tEVDNC=ASSMB;HOMSEQ=CTGTAATCCCAGCACTTTGGGAGGCCGAGG;MAPQ=60;MATEID=861660:2;MATENM=3;NM=2;NUMPARTS=2;SCTG=c_20_5635001_5660001_0C;SPAN=1313;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:11:4:3:33,3,0:11:0:-33.01:33.01\n20\t5649718\t861660:2\tC\t]20:5648405]C\t33\tPASS\tEVDNC=ASSMB;HOMSEQ=CTGTAATCCCAGCACTTTGGGAGGCCGAGG;MAPQ=60;MATEID=861660:1;MATENM=2;NM=3;NUMPARTS=2;SCTG=c_20_5635001_5660001_0C;SPAN=1313;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:11:4:3:33,3,0:11:0:-33.01:33.01\n20\t6368548\t861822:2\tT\tT]14:45854840]\t27\tPASS\tDISC_MAPQ=53;EVDNC=DSCRD;IMPRECISE;MAPQ=53;MATEID=861822:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=14:45854840(+)-20:6368548(+)__20_6345501_6370501D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:19:17.9:27.8,0,17.9:0:10:-27.73:27.73\n20\t6681439\t861891:2\tA\t]1:167120498]A\t62\tPASS\tEVDNC=ASSMB;HOMSEQ=A;MAPQ=60;MATEID=861891:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_6664001_6689001_24C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:21:17:5.7:62.7,5.7,0:21:0:-62.72:62.72\n20\t7116263\t862037:1\tT\tT[20:7122199[\t52\tPASS\tDISC_MAPQ=56;EVDNC=DSCRD;IMPRECISE;MAPQ=56;MATEID=862037:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=20:7116263(+)-20:7122199(-)__20_7105001_7130001D;SPAN=5936;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:18:17:4.8:52.8,4.8,0:0:18:-52.81:52.81\n20\t7122199\t862037:2\tC\t]20:7116263]C\t52\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=862037:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=20:7116263(+)-20:7122199(-)__20_7105001_7130001D;SPAN=5936;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:18:17:4.8:52.8,4.8,0:0:18:-52.81:52.81\n20\t7293703\t862103:1\tT\tT[20:7294003[\t99\tPASS\tEVDNC=ASSMB;HOMSEQ=GACAATACATTTTT;MAPQ=60;MATEID=862103:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_20_7276501_7301501_131C;SPAN=300;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:34:24:9.3:102.3,9.3,0:34:0:-102.3:102.3\n20\t7294003\t862103:2\tG\t]20:7293703]G\t99\tPASS\tEVDNC=ASSMB;HOMSEQ=GACAATACATTTTT;MAPQ=60;MATEID=862103:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_20_7276501_7301501_131C;SPAN=300;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:34:24:9.3:102.3,9.3,0:34:0:-102.3:102.3\n20\t7850360\t862267:1\tT\t]20:7932110]T\t15\tPASS\tDISC_MAPQ=56;EVDNC=ASDIS;INSERTION=T;MAPQ=40;MATEID=862267:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_20_7913501_7938501_79C;SPAN=81750;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:6:15:15.5:15.5,0,22.1:3:6:-15.59:15.65\n20\t7932110\t862267:2\tT\tT[20:7850360[\t15\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;INSERTION=T;MAPQ=60;MATEID=862267:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_20_7913501_7938501_79C;SPAN=81750;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:6:15:15.5:15.5,0,22.1:3:6:-15.59:15.65\n20\t8006283\t866149:1\tA\tA[20:21398815[\t21\tPASS\tEVDNC=ASSMB;INSERTION=TAT;MAPQ=60;MATEID=866149:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_21388501_21413501_37C;SPAN=13392532;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:19:21.2:21.2,0,24.5:8:0:-21.07:21.11\n20\t10323922\t862941:1\tC\t]20:10324068]C\t41\tPASS\tEVDNC=ASSMB;HOMSEQ=CCT;MAPQ=60;MATEID=862941:2;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_20_10314501_10339501_15C;SPAN=146;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:16:41:41.3:41.3,0,61.1:16:0:-41.29:41.52\n20\t10324068\t862941:2\tT\tT[20:10323922[\t41\tPASS\tEVDNC=ASSMB;HOMSEQ=CCT;MAPQ=60;MATEID=862941:1;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_20_10314501_10339501_15C;SPAN=146;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:16:41:41.3:41.3,0,61.1:16:0:-41.29:41.52\n20\t11666903\t863362:1\tG\tG[20:11668022[\t62\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=863362:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=20:11666903(+)-20:11668022(-)__20_11662001_11687001D;SPAN=1119;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:21:8:5.7:62.7,5.7,0:0:21:-62.72:62.72\n20\t11668022\t863362:2\tA\t]20:11666903]A\t62\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=863362:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=20:11666903(+)-20:11668022(-)__20_11662001_11687001D;SPAN=1119;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:21:8:5.7:62.7,5.7,0:0:21:-62.72:62.72\n20\t14133206\t864184:1\tT\tT[20:14728329[\t46\tPASS\tEVDNC=ASSMB;INSERTION=A;MAPQ=60;MATEID=864184:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_14724501_14749501_0C;SPAN=595123;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:16:10:4.2:46.2,4.2,0:16:0:-46.21:46.21\n20\t14164805\t864303:1\tT\tT[20:15244618[\t36\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=864303:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_15239001_15264001_63C;SPAN=1079813;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:12:8:3.3:36.3,3.3,0:12:0:-36.31:36.31\n20\t14728329\t864184:2\tC\t]20:14133206]C\t46\tPASS\tEVDNC=ASSMB;INSERTION=A;MAPQ=60;MATEID=864184:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_14724501_14749501_0C;SPAN=595123;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:16:10:4.2:46.2,4.2,0:16:0:-46.21:46.21\n20\t14940342\t864232:1\tA\tA[20:14972845[\t26\tPASS\tDISC_MAPQ=53;EVDNC=DSCRD;IMPRECISE;MAPQ=53;MATEID=864232:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=20:14940342(+)-20:14972845(-)__20_14969501_14994501D;SPAN=32503;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:11:0.2:26.6,0,0.2:0:9:-28.04:28.04\n20\t14972845\t864232:2\tA\t]20:14940342]A\t26\tPASS\tDISC_MAPQ=51;EVDNC=DSCRD;IMPRECISE;MAPQ=51;MATEID=864232:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=20:14940342(+)-20:14972845(-)__20_14969501_14994501D;SPAN=32503;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:11:0.2:26.6,0,0.2:0:9:-28.04:28.04\n20\t15095882\t864265:2\tT\tT[9:122576590[\t29\tPASS\tEVDNC=ASSMB;INSERTION=T;MAPQ=60;MATEID=864265:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_15092001_15117001_11C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:10:7:2.7:29.7,2.7,0:10:0:-29.71:29.71\n20\t15244618\t864303:2\tG\t]20:14164805]G\t36\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=864303:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_15239001_15264001_63C;SPAN=1079813;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:12:8:3.3:36.3,3.3,0:12:0:-36.31:36.31\n20\t15405783\t864334:2\tA\t]9:122577102]A\t39\tPASS\tEVDNC=ASSMB;HOMSEQ=AA;MAPQ=60;MATEID=864334:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_15386001_15411001_1C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:13:12:3.6:39.6,3.6,0:13:0:-39.61:39.61\n20\t15902057\t864505:1\tT\tT[20:15962741[\t42\tPASS\tEVDNC=ASSMB;HOMSEQ=TT;MAPQ=60;MATEID=864505:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_15949501_15974501_3C;SPAN=60684;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:13:14:3.9:42.9,3.9,0:13:0:-42.71:42.71\n20\t15962741\t864505:2\tT\t]20:15902057]T\t42\tPASS\tEVDNC=ASSMB;HOMSEQ=TT;MAPQ=60;MATEID=864505:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_15949501_15974501_3C;SPAN=60684;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:13:14:3.9:42.9,3.9,0:13:0:-42.71:42.71\n20\t16188295\t864602:1\tT\t]20:16188860]T\t24\tPASS\tDISC_MAPQ=52;EVDNC=DSCRD;IMPRECISE;MAPQ=52;MATEID=864602:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=20:16188295(-)-20:16188860(+)__20_16170001_16195001D;SPAN=565;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:31:24.5:24.5,0,50.9:0:10:-24.3:24.91\n20\t16188860\t864602:2\tT\tT[20:16188295[\t24\tPASS\tDISC_MAPQ=56;EVDNC=DSCRD;IMPRECISE;MAPQ=56;MATEID=864602:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=20:16188295(-)-20:16188860(+)__20_16170001_16195001D;SPAN=565;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:31:24.5:24.5,0,50.9:0:10:-24.3:24.91\n20\t18047369\t865156:1\tC\tC[20:18047636[\t46\tPASS\tDISC_MAPQ=58;EVDNC=ASDIS;HOMSEQ=CTGAGGTCAGGAGTTCGAGACCAGCCTGACCAATATGATGAAACCCCGTCTCTACTAAAAATACAAAAATTAGCC;MAPQ=60;MATEID=865156:2;MATENM=4;NM=0;NUMPARTS=2;SCTG=c_20_18032001_18057001_119C;SPAN=267;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:14:15:4.2:46.2,4.2,0:8:6:-46.19:46.19\n20\t18047636\t865156:2\tC\t]20:18047369]C\t46\tPASS\tDISC_MAPQ=49;EVDNC=ASDIS;HOMSEQ=CTGAGGTCAGGAGTTCGAGACCAGCCTGACCAATATGATGAAACCCCGTCTCTACTAAAAATACAAAAATTAGCC;MAPQ=60;MATEID=865156:1;MATENM=0;NM=4;NUMPARTS=2;SCTG=c_20_18032001_18057001_119C;SPAN=267;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:14:15:4.2:46.2,4.2,0:8:6:-46.19:46.19\n20\t18261083\t865228:1\tA\t]20:18262525]A\t43\tPASS\tEVDNC=ASSMB;INSERTION=CA;MAPQ=60;MATEID=865228:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_18252501_18277501_108C;SPAN=1442;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:15:21:7.4:43.7,0,7.4:15:0:-44.87:44.87\n20\t18262525\t865228:2\tA\tA[20:18261083[\t43\tPASS\tEVDNC=ASSMB;INSERTION=CA;MAPQ=60;MATEID=865228:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_18252501_18277501_108C;SPAN=1442;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:15:21:7.4:43.7,0,7.4:15:0:-44.87:44.87\n20\t21065659\t866065:2\tA\t[1:53953907[A\t32\tPASS\tDISC_MAPQ=35;EVDNC=ASDIS;HOMSEQ=CT;MAPQ=60;MATEID=866065:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_21045501_21070501_8C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:14:2.6:32.3,0,2.6:9:4:-33.83:33.83\n20\t21305489\t866118:1\tA\tA[20:21308135[\t99\tPASS\tDISC_MAPQ=59;EVDNC=ASDIS;HOMSEQ=CCATGTTGGCCAGGCTGGTCTCGAACTCCTGACCTCA;MAPQ=60;MATEID=866118:2;MATENM=11;NM=2;NUMPARTS=2;SCTG=c_20_21290501_21315501_3C;SPAN=2646;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:33:8:9:99,9,0:20:20:-99.02:99.02\n20\t21308135\t866118:2\tC\t]20:21305489]C\t99\tPASS\tDISC_MAPQ=59;EVDNC=ASDIS;HOMSEQ=CCATGTTGGCCAGGCTGGTCTCGAACTCCTGACCTCA;MAPQ=60;MATEID=866118:1;MATENM=2;NM=11;NUMPARTS=2;SCTG=c_20_21290501_21315501_3C;SPAN=2646;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:33:8:9:99,9,0:20:20:-99.02:99.02\n20\t21398815\t866149:2\tT\t]20:8006283]T\t21\tPASS\tEVDNC=ASSMB;INSERTION=TAT;MAPQ=60;MATEID=866149:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_21388501_21413501_37C;SPAN=13392532;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:19:21.2:21.2,0,24.5:8:0:-21.07:21.11\n20\t21799466\t866215:1\tG\tG[20:21799844[\t46\tPASS\tEVDNC=ASSMB;INSERTION=CAACGTGACTTTGACT;MAPQ=60;MATEID=866215:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_21780501_21805501_7C;SPAN=378;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:17:35:39.8:46.4,0,39.8:17:0:-46.29:46.29\n20\t21799844\t866215:2\tA\t]20:21799466]A\t46\tPASS\tEVDNC=ASSMB;INSERTION=CAACGTGACTTTGACT;MAPQ=60;MATEID=866215:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_21780501_21805501_7C;SPAN=378;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:17:35:39.8:46.4,0,39.8:17:0:-46.29:46.29\n20\t21869265\t866227:1\tT\tT[20:21869552[\t44\tPASS\tEVDNC=ASSMB;HOMSEQ=T;MAPQ=60;MATEID=866227:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_20_21854001_21879001_35C;SPAN=287;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:16:30:31.1:44.3,0,31.1:16:0:-44.51:44.51\n20\t21869552\t866227:2\tT\t]20:21869265]T\t44\tPASS\tEVDNC=ASSMB;HOMSEQ=T;MAPQ=60;MATEID=866227:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_20_21854001_21879001_35C;SPAN=287;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:16:30:31.1:44.3,0,31.1:16:0:-44.51:44.51\n20\t23122556\t866580:1\tC\tC[20:23122996[\t20\tPASS\tEVDNC=ASSMB;HOMSEQ=C;MAPQ=60;MATEID=866580:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_23103501_23128501_77C;SPAN=440;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:35:20:20,0,66.2:9:0:-19.87:21.36\n20\t23122559\t866581:1\tG\t[20:23122996[G\t10\tPASS\tDISC_MAPQ=60;EVDNC=TSI_L;HOMSEQ=GG;MAPQ=60;MATEID=866581:2;MATENM=0;NM=0;NUMPARTS=3;REPSEQ=ATAT;SCTG=c_20_23103501_23128501_37C;SPAN=437;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:6:35:10.1:10.1,0,76.1:5:4:-9.968:13.04\n20\t23122996\t866580:2\tC\t]20:23122556]C\t20\tPASS\tEVDNC=ASSMB;HOMSEQ=C;MAPQ=60;MATEID=866580:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_23103501_23128501_77C;SPAN=440;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:35:20:20,0,66.2:9:0:-19.87:21.36\n20\t23122996\t866581:2\tC\t[20:23122559[C\t10\tPASS\tDISC_MAPQ=255;EVDNC=TSI_L;HOMSEQ=GG;MAPQ=60;MATEID=866581:1;MATENM=0;NM=0;NUMPARTS=3;REPSEQ=ATAT;SCTG=c_20_23103501_23128501_37C;SPAN=437;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:6:35:10.1:10.1,0,76.1:5:4:-9.968:13.04\n20\t23520466\t866673:1\tG\t]20:23608865]G\t34\tPASS\tDISC_MAPQ=59;EVDNC=ASDIS;HOMSEQ=GGGGC;MAPQ=60;MATEID=866673:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_23495501_23520501_81C;SPAN=88399;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:20:14.3:34.1,0,14.3:7:9:-34.32:34.32\n20\t23608865\t866673:2\tC\tC[20:23520466[\t34\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=GGGGC;MAPQ=60;MATEID=866673:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_23495501_23520501_81C;SPAN=88399;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:20:14.3:34.1,0,14.3:7:9:-34.32:34.32\n20\t23664456\t866799:1\tA\t]20:23795323]A\t39\tPASS\tDISC_MAPQ=59;EVDNC=DSCRD;IMPRECISE;MAPQ=59;MATEID=866799:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=20:23664456(-)-20:23795323(+)__20_23789501_23814501D;SPAN=130867;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:13:11:3.6:39.6,3.6,0:0:13:-39.61:39.61\n20\t23702739\t866762:1\tA\t]20:23765575]A\t46\tPASS\tDISC_MAPQ=25;EVDNC=DSCRD;IMPRECISE;MAPQ=25;MATEID=866762:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=20:23702739(-)-20:23765575(+)__20_23740501_23765501D;SPAN=62836;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:15:12:4.2:46.2,4.2,0:0:15:-46.21:46.21\n20\t23765575\t866762:2\tA\tA[20:23702739[\t46\tPASS\tDISC_MAPQ=57;EVDNC=DSCRD;IMPRECISE;MAPQ=57;MATEID=866762:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=20:23702739(-)-20:23765575(+)__20_23740501_23765501D;SPAN=62836;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:15:12:4.2:46.2,4.2,0:0:15:-46.21:46.21\n20\t23795323\t866799:2\tT\tT[20:23664456[\t39\tPASS\tDISC_MAPQ=51;EVDNC=DSCRD;IMPRECISE;MAPQ=51;MATEID=866799:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=20:23664456(-)-20:23795323(+)__20_23789501_23814501D;SPAN=130867;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:13:11:3.6:39.6,3.6,0:0:13:-39.61:39.61\n20\t24288974\t866997:1\tC\tC[20:24289194[\t41\tPASS\tEVDNC=ASSMB;HOMSEQ=TATCCTGTATTTTC;MAPQ=60;MATEID=866997:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_24279501_24304501_80C;SPAN=220;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:18:1.7:41.3,0,1.7:14:0:-42.92:42.92\n20\t24289194\t866997:2\tT\t]20:24288974]T\t41\tPASS\tEVDNC=ASSMB;HOMSEQ=TATCCTGTATTTTC;MAPQ=60;MATEID=866997:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_24279501_24304501_80C;SPAN=220;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:18:1.7:41.3,0,1.7:14:0:-42.92:42.92\n20\t24682044\t867104:1\tG\t]20:24682157]G\t99\tPASS\tEVDNC=ASSMB;INSERTION=GC;MAPQ=30;MATEID=867104:2;MATENM=4;NM=3;NUMPARTS=2;SCTG=c_20_24671501_24696501_54C;SPAN=113;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:37:76:87.8:101,0,87.8:37:0:-100.8:100.8\n20\t24682157\t867104:2\tT\tT[20:24682044[\t99\tPASS\tEVDNC=ASSMB;INSERTION=GC;MAPQ=60;MATEID=867104:1;MATENM=3;NM=4;NUMPARTS=2;SCTG=c_20_24671501_24696501_54C;SPAN=113;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:37:76:87.8:101,0,87.8:37:0:-100.8:100.8\n20\t24923063\t867146:1\tC\tC[20:24923780[\t66\tPASS\tEVDNC=ASSMB;HOMSEQ=GC;MAPQ=60;MATEID=867146:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_20_24916501_24941501_23C;SPAN=717;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:20:22:6:66,6,0:20:0:-64.93:64.93\n20\t24923780\t867146:2\tG\t]20:24923063]G\t66\tPASS\tEVDNC=ASSMB;HOMSEQ=GC;MAPQ=60;MATEID=867146:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_20_24916501_24941501_23C;SPAN=717;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:20:22:6:66,6,0:20:0:-64.93:64.93\n20\t26280028\t867748:1\tA\tA[20:26281095[\t75\tPASS\tDISC_MAPQ=51;EVDNC=DSCRD;IMPRECISE;MAPQ=51;MATEID=867748:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=20:26280028(+)-20:26281095(-)__20_26264001_26289001D;SPAN=1067;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:25:3:6.9:75.9,6.9,0:0:25:-75.92:75.92\n20\t26281095\t867748:2\tT\t]20:26280028]T\t75\tPASS\tDISC_MAPQ=59;EVDNC=DSCRD;IMPRECISE;MAPQ=59;MATEID=867748:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=20:26280028(+)-20:26281095(-)__20_26264001_26289001D;SPAN=1067;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:25:3:6.9:75.9,6.9,0:0:25:-75.92:75.92\n20\t26317015\t867834:1\tT\tT[20:26322075[\t99\tPASS\tDISC_MAPQ=55;EVDNC=ASDIS;HOMSEQ=GAGCAGTTTTGAAACACTCTTTTTGTTGGATCTGCAAGTCGACATTTGGAGCGCTTTGAGGCCT;MAPQ=60;MATEID=867834:2;MATENM=8;NM=8;NUMPARTS=2;SCTG=c_20_26313001_26338001_73C;SPAN=5060;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:53:13:14.7:161.7,14.7,0:25:36:-161.7:161.7\n20\t26322075\t867834:2\tG\t]20:26317015]G\t99\tPASS\tDISC_MAPQ=58;EVDNC=ASDIS;HOMSEQ=GAGCAGTTTTGAAACACTCTTTTTGTTGGATCTGCAAGTCGACATTTGGAGCGCTTTGAGGCCT;MAPQ=60;MATEID=867834:1;MATENM=8;NM=8;NUMPARTS=2;SCTG=c_20_26313001_26338001_73C;SPAN=5060;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:53:13:14.7:161.7,14.7,0:25:36:-161.7:161.7\n20\t26364309\t867910:1\tN\tN[20:26366032[\t38\tPASS\tDISC_MAPQ=52;EVDNC=DSCRD;IMPRECISE;MAPQ=52;MATEID=867910:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=20:26364309(+)-20:26366032(-)__20_26362001_26387001D;SPAN=1723;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:26:25.7:38.9,0,25.7:0:14:-39.03:39.03\n20\t26366032\t867910:2\tT\t]20:26364309]T\t38\tPASS\tDISC_MAPQ=20;EVDNC=DSCRD;IMPRECISE;MAPQ=20;MATEID=867910:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=20:26364309(+)-20:26366032(-)__20_26362001_26387001D;SPAN=1723;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:26:25.7:38.9,0,25.7:0:14:-39.03:39.03\n20\t26366434\t867920:1\tA\tA[20:26368768[\t99\tPASS\tDISC_MAPQ=9;EVDNC=TSI_G;HOMSEQ=CATTCTCAGAAACTTATTTCTGATGCGTGTACTCAACTAACAGAGTTGAACCTTTGTTTTGTCAGAGAAGATTTCAAACTCTCTTTTTGTGGAATCTGCAAGTGGATATTTGGCTAGGTGTGTGGATTTCGCTGGAAACGGGAATACATAGAAAAAGCAGACAGCAGCGTTCTGAGAAACTACTTTGTGATGTTTGCATTGAAGTCACAGAGCTGAACACTCCCTTTCATAGATCAGGTTTGAAACACTCCTTTTGTAGTATCTGGAAATGGACATTTGGAGCGCTTTCAGGCCTATGGTGAAAAAGGAAATATCTTCCTATAAAAACTAGACAGAAGCATTCTCTGAAACTAGTTTATGATGCATCTACTCAACTAACAGAGTTGAACATTTCTTTTGATAGAGCAGTTTTGAAACACACTTTTTGTGGAATCTCCAAGTGGA;INSERTION=GTTGAACGTTTGTTTTGACAGAGCAGTTTTGAAACACTCTTTTTGTGGAATCTGCAAGTGGATGTTCGGTTAGCTTTGCGGATTTCGTTGGAAACGGGAATACGTATAAAAAGCAGACAGCAGCGTTCTGAGAAACTTCATTGTGATGTTTGCATTCAAGTCACGGAGTTGAACATTCCCTTTCATAGAGCAGGTTTGAAACACTCTTTTTGTCATATCTGGAAGTGTCCATTTGGAGCGCGTTCAAGCTTGTGTTGAAAAAAGAAATATCTTCCCTTAAAAATTAGACAGTAG;MAPQ=48;MATEID=867920:2;MATENM=23;NM=5;NUMPARTS=3;SCTG=c_20_26362001_26387001_43C;SECONDARY;SPAN=2334;SUBN=5;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:55:67:4.4:162.8,0,4.4:54:3:-171.5:171.5\n20\t26368768\t867920:2\tC\t]20:26366434]C\t99\tPASS\tDISC_MAPQ=2;EVDNC=TSI_G;HOMSEQ=CATTCTCAGAAACTTATTTCTGATGCGTGTACTCAACTAACAGAGTTGAACCTTTGTTTTGTCAGAGAAGATTTCAAACTCTCTTTTTGTGGAATCTGCAAGTGGATATTTGGCTAGGTGTGTGGATTTCGCTGGAAACGGGAATACATAGAAAAAGCAGACAGCAGCGTTCTGAGAAACTACTTTGTGATGTTTGCATTGAAGTCACAGAGCTGAACACTCCCTTTCATAGATCAGGTTTGAAACACTCCTTTTGTAGTATCTGGAAATGGACATTTGGAGCGCTTTCAGGCCTATGGTGAAAAAGGAAATATCTTCCTATAAAAACTAGACAGAAGCATTCTCTGAAACTAGTTTATGATGCATCTACTCAACTAACAGAGTTGAACATTTCTTTTGATAGAGCAGTTTTGAAACACACTTTTTGTGGAATCTCCAAGTGGA;INSERTION=GTTGAACGTTTGTTTTGACAGAGCAGTTTTGAAACACTCTTTTTGTGGAATCTGCAAGTGGATGTTCGGTTAGCTTTGCGGATTTCGTTGGAAACGGGAATACGTATAAAAAGCAGACAGCAGCGTTCTGAGAAACTTCATTGTGATGTTTGCATTCAAGTCACGGAGTTGAACATTCCCTTTCATAGAGCAGGTTTGAAACACTCTTTTTGTCATATCTGGAAGTGTCCATTTGGAGCGCGTTCAAGCTTGTGTTGAAAAAAGAAATATCTTCCCTTAAAAATTAGACAGTAG;MAPQ=48;MATEID=867920:1;MATENM=5;NM=23;NUMPARTS=3;SCTG=c_20_26362001_26387001_43C;SECONDARY;SPAN=2334;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:55:67:4.4:162.8,0,4.4:54:3:-171.5:171.5\n20\t26486446\t868032:1\tA\tA[20:26599740[\t32\tPASS\tDISC_MAPQ=29;EVDNC=DSCRD;IMPRECISE;MAPQ=29;MATEID=868032:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=20:26486446(+)-20:26599740(-)__20_26484501_26509501D;SPAN=113294;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:16:72:32.6:32.6,0,148.1:0:16:-32.58:36.8\n20\t26517768\t868080:1\tA\tA[20:26596367[\t42\tPASS\tDISC_MAPQ=33;EVDNC=DSCRD;IMPRECISE;MAPQ=33;MATEID=868080:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=20:26517768(+)-20:26596367(-)__20_26509001_26534001D;SPAN=78599;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:14:12:3.9:42.9,3.9,0:0:14:-42.91:42.91\n20\t26545266\t868137:1\tT\tT[20:26556859[\t39\tPASS\tDISC_MAPQ=30;EVDNC=DSCRD;IMPRECISE;MAPQ=30;MATEID=868137:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=20:26545266(+)-20:26556859(-)__20_26533501_26558501D;SPAN=11593;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:12:13:3.6:39.6,3.6,0:0:12:-39.28:39.28\n20\t26556859\t868137:2\tC\t]20:26545266]C\t39\tPASS\tDISC_MAPQ=33;EVDNC=DSCRD;IMPRECISE;MAPQ=33;MATEID=868137:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=20:26545266(+)-20:26556859(-)__20_26533501_26558501D;SPAN=11593;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:12:13:3.6:39.6,3.6,0:0:12:-39.28:39.28\n20\t26596367\t868080:2\tA\t]20:26517768]A\t42\tPASS\tDISC_MAPQ=27;EVDNC=DSCRD;IMPRECISE;MAPQ=27;MATEID=868080:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=20:26517768(+)-20:26596367(-)__20_26509001_26534001D;SPAN=78599;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:14:12:3.9:42.9,3.9,0:0:14:-42.91:42.91\n20\t26599740\t868032:2\tT\t]20:26486446]T\t32\tPASS\tDISC_MAPQ=26;EVDNC=DSCRD;IMPRECISE;MAPQ=26;MATEID=868032:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=20:26486446(+)-20:26599740(-)__20_26484501_26509501D;SPAN=113294;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:16:72:32.6:32.6,0,148.1:0:16:-32.58:36.8\n20\t26608405\t868274:1\tC\tC[20:26631417[\t99\tPASS\tDISC_MAPQ=49;EVDNC=DSCRD;IMPRECISE;MAPQ=49;MATEID=868274:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=20:26608405(+)-20:26631417(-)__20_26607001_26632001D;SPAN=23012;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:39:17:10.8:118.8,10.8,0:0:39:-118.8:118.8\n20\t26615180\t868475:1\tG\tG[20:27261198[\t46\tPASS\tDISC_MAPQ=18;EVDNC=DSCRD;IMPRECISE;MAPQ=18;MATEID=868475:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=20:26615180(+)-20:27261198(-)__20_27244001_27269001D;SPAN=646018;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:15:9:4.2:46.2,4.2,0:0:15:-46.21:46.21\n20\t26631417\t868274:2\tG\t]20:26608405]G\t99\tPASS\tDISC_MAPQ=55;EVDNC=DSCRD;IMPRECISE;MAPQ=55;MATEID=868274:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=20:26608405(+)-20:26631417(-)__20_26607001_26632001D;SPAN=23012;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:39:17:10.8:118.8,10.8,0:0:39:-118.8:118.8\n20\t26631898\t868385:1\tC\tC[20:26634139[\t21\tPASS\tDISC_MAPQ=38;EVDNC=DSCRD;IMPRECISE;MAPQ=38;MATEID=868385:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=20:26631898(+)-20:26634139(-)__20_26631501_26656501D;SPAN=2241;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:19:21.2:21.2,0,24.5:0:8:-21.07:21.11\n20\t26634139\t868385:2\tA\t]20:26631898]A\t21\tPASS\tDISC_MAPQ=23;EVDNC=DSCRD;IMPRECISE;MAPQ=23;MATEID=868385:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=20:26631898(+)-20:26634139(-)__20_26631501_26656501D;SPAN=2241;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:19:21.2:21.2,0,24.5:0:8:-21.07:21.11\n20\t26634424\t868389:1\tA\tA]20:26634787]\t23\tPASS\tDISC_MAPQ=20;EVDNC=DSCRD;IMPRECISE;MAPQ=20;MATEID=868389:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=20:26634424(+)-20:26634787(+)__20_26631501_26656501D;SPAN=363;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:47:23.3:23.3,0,92.6:0:11:-23.1:25.58\n20\t26634787\t868389:2\tC\tC]20:26634424]\t23\tPASS\tDISC_MAPQ=59;EVDNC=DSCRD;IMPRECISE;MAPQ=59;MATEID=868389:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=20:26634424(+)-20:26634787(+)__20_26631501_26656501D;SPAN=363;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:47:23.3:23.3,0,92.6:0:11:-23.1:25.58\n20\t27261198\t868475:2\tG\t]20:26615180]G\t46\tPASS\tDISC_MAPQ=30;EVDNC=DSCRD;IMPRECISE;MAPQ=30;MATEID=868475:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=20:26615180(+)-20:27261198(-)__20_27244001_27269001D;SPAN=646018;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:15:9:4.2:46.2,4.2,0:0:15:-46.21:46.21\n20\t27295507\t99662:2\tG\tG[2:94189122[\t50\tPASS\tDISC_MAPQ=19;EVDNC=DSCRD;IMPRECISE;MAPQ=19;MATEID=99662:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=2:94189122(-)-20:27295507(+)__2_94178001_94203001D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:18:30:24.5:50.9,0,24.5:0:18:-51.49:51.49\n20\t28728974\t892538:1\tN\t]21:7957991]N\t26\tPASS\tDISC_MAPQ=40;EVDNC=DSCRD;IMPRECISE;MAPQ=40;MATEID=892538:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=20:28728974(-)-21:7957991(+)__21_7938001_7963001D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:15:81:26.9:26.9,0,175.4:0:15:-26.75:33.16\n20\t28754934\t869379:1\tA\tA[20:28757852[\t99\tPASS\tDISC_MAPQ=44;EVDNC=ASDIS;HOMSEQ=ATATCCCTTTGCAGACTCTA;MAPQ=60;MATEID=869379:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_20_28738501_28763501_506C;SPAN=2918;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:42:19:11.7:128.7,11.7,0:41:4:-128.7:128.7\n20\t28757851\t896709:1\tN\t[21:10798083[N\t0\tPASS\tDISC_MAPQ=39;EVDNC=DSCRD;IMPRECISE;MAPQ=39;MATEID=896709:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=20:28757851(-)-21:10798083(-)__21_10780001_10805001D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/0:8:151:16:0,16,412.6:0:8:16.04:13.09\n20\t28757852\t869379:2\tA\t]20:28754934]A\t99\tPASS\tDISC_MAPQ=17;EVDNC=ASDIS;HOMSEQ=ATATCCCTTTGCAGACTCTA;MAPQ=60;MATEID=869379:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_20_28738501_28763501_506C;SPAN=2918;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:42:19:11.7:128.7,11.7,0:41:4:-128.7:128.7\n20\t28769332\t869502:1\tT\t]20:28771426]T\t60\tPASS\tDISC_MAPQ=54;EVDNC=ASDIS;HOMSEQ=TGCACACATCACAAAGAAGTTTCTCAGAATGCTTCTCTCTAGTTTTTATGTGA;MAPQ=60;MATEID=869502:2;MATENM=0;NM=3;NUMPARTS=2;SCTG=c_20_28763001_28788001_145C;SPAN=2094;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:23:55:60.5:60.5,0,77:11:14:-60.46:60.59\n20\t28771426\t869502:2\tA\tA[20:28769332[\t60\tPASS\tDISC_MAPQ=54;EVDNC=ASDIS;HOMSEQ=TGCACACATCACAAAGAAGTTTCTCAGAATGCTTCTCTCTAGTTTTTATGTGA;MAPQ=60;MATEID=869502:1;MATENM=3;NM=0;NUMPARTS=2;SCTG=c_20_28763001_28788001_145C;SPAN=2094;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:23:55:60.5:60.5,0,77:11:14:-60.46:60.59\n20\t28781252\t658453:2\tT\t[13:16259044[T\t92\tPASS\tDISC_MAPQ=255;EVDNC=ASDIS;HOMSEQ=TCAGAATGCTTCTGTGTAGTTTTTTTGTGAAGATATTT;MAPQ=60;MATEID=658453:1;MATENM=7;NM=1;NUMPARTS=2;SCTG=c_13_16243501_16268501_360C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:30:10:8.4:92.4,8.4,0:21:9:-92.42:92.42\n20\t28815225\t869856:1\tC\tC[20:28824450[\t0\tPASS\tDISC_MAPQ=49;EVDNC=ASDIS;HOMSEQ=TATGTGAAGATATTTCC;MAPQ=60;MATEID=869856:2;MATENM=5;NM=4;NUMPARTS=2;SCTG=c_20_28812001_28837001_258C;SPAN=9225;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/0:16:243:15.1:0,15.1,640.3:10:9:15.49:27.73\n20\t28815434\t869859:1\tA\t]20:28824721]A\t9\tPASS\tDISC_MAPQ=29;EVDNC=ASDIS;HOMSEQ=ACTTGCAGATTCTACAAAAAGAGAGTTTCAAAACTGCTCAATCAAAAG;MAPQ=60;MATEID=869859:2;MATENM=2;NM=2;NUMPARTS=2;SCTG=c_20_28812001_28837001_824C;SPAN=9287;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:26:271:9.7:9.7,0,673.1:22:4:-9.65:49.49\n20\t28824450\t869856:2\tT\t]20:28815225]T\t0\tPASS\tDISC_MAPQ=59;EVDNC=ASDIS;HOMSEQ=TATGTGAAGATATTTCC;MAPQ=60;MATEID=869856:1;MATENM=4;NM=5;NUMPARTS=2;SCTG=c_20_28812001_28837001_258C;SPAN=9225;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/0:16:243:15.1:0,15.1,640.3:10:9:15.49:27.73\n20\t28824721\t869859:2\tG\tG[20:28815434[\t9\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=ACTTGCAGATTCTACAAAAAGAGAGTTTCAAAACTGCTCAATCAAAAG;MAPQ=60;MATEID=869859:1;MATENM=2;NM=2;NUMPARTS=2;SCTG=c_20_28812001_28837001_824C;SPAN=9287;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:26:271:9.7:9.7,0,673.1:22:4:-9.65:49.49\n20\t28835228\t869771:2\tT\tT[10:39496326[\t22\tPASS\tDISC_MAPQ=24;EVDNC=DSCRD;IMPRECISE;MAPQ=24;MATEID=869771:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=10:39496326(-)-20:28835228(+)__20_28812001_28837001D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:50:22.4:22.4,0,101.6:0:11:-22.26:25.25\n20\t28840026\t870053:1\tT\tT[20:28841515[\t0\tPASS\tDISC_MAPQ=46;EVDNC=DSCRD;IMPRECISE;MAPQ=46;MATEID=870053:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=20:28840026(+)-20:28841515(-)__20_28836501_28861501D;SPAN=1489;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/0:11:160:8.5:0,8.5,419.2:0:11:8.664:19.28\n20\t28840894\t870075:1\tG\t]20:29152583]G\t47\tPASS\tDISC_MAPQ=12;EVDNC=ASDIS;HOMSEQ=GTGGAGAAGGAAATATCTTCACATAAAAACTATGCAGAAGCATTCTGAGAAAC;MAPQ=44;MATEID=870075:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_20_28836501_28861501_26C;SPAN=311689;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:18:44:47:47,0,63.5:13:5:-47.05:47.19\n20\t28841515\t870053:2\tG\t]20:28840026]G\t0\tPASS\tDISC_MAPQ=20;EVDNC=DSCRD;IMPRECISE;MAPQ=20;MATEID=870053:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=20:28840026(+)-20:28841515(-)__20_28836501_28861501D;SPAN=1489;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/0:11:160:8.5:0,8.5,419.2:0:11:8.664:19.28\n20\t28859998\t870106:1\tT\t]20:28860195]T\t66\tPASS\tEVDNC=ASSMB;HOMSEQ=TCACACATCACAAAGAAGTTTCTCAGA;MAPQ=60;MATEID=870106:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_28836501_28861501_116C;SPAN=197;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:24:46:46.7:66.5,0,46.7:24:0:-66.42:66.42\n20\t28860195\t870106:2\tA\tA[20:28859998[\t66\tPASS\tEVDNC=ASSMB;HOMSEQ=TCACACATCACAAAGAAGTTTCTCAGA;MAPQ=60;MATEID=870106:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_28836501_28861501_116C;SPAN=197;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:24:46:46.7:66.5,0,46.7:24:0:-66.42:66.42\n20\t28861335\t870221:1\tA\tA[20:28868471[\t46\tPASS\tDISC_MAPQ=49;EVDNC=DSCRD;IMPRECISE;MAPQ=49;MATEID=870221:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=20:28861335(+)-20:28868471(-)__20_28861001_28886001D;SPAN=7136;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:16:11:4.2:46.2,4.2,0:0:16:-46.21:46.21\n20\t28868471\t870221:2\tT\t]20:28861335]T\t46\tPASS\tDISC_MAPQ=27;EVDNC=DSCRD;IMPRECISE;MAPQ=27;MATEID=870221:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=20:28861335(+)-20:28868471(-)__20_28861001_28886001D;SPAN=7136;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:16:11:4.2:46.2,4.2,0:0:16:-46.21:46.21\n20\t28897172\t870531:1\tT\tT[20:29189810[\t42\tPASS\tDISC_MAPQ=28;EVDNC=DSCRD;IMPRECISE;MAPQ=28;MATEID=870531:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=20:28897172(+)-20:29189810(-)__20_28885501_28910501D;SPAN=292638;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:15:26:22.4:42.2,0,22.4:0:15:-42.5:42.5\n20\t29062721\t873050:1\tG\tG]20:29515167]\t37\tPASS\tDISC_MAPQ=16;EVDNC=DSCRD;IMPRECISE;MAPQ=16;MATEID=873050:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=20:29062721(+)-20:29515167(+)__20_29498001_29523001D;SPAN=452446;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:33:37.1:37.1,0,43.7:0:14:-36.94:36.99\n20\t29088471\t870919:2\tT\t]4:189948866]T\t3\tPASS\tDISC_MAPQ=24;EVDNC=DSCRD;IMPRECISE;MAPQ=24;MATEID=870919:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=4:189948866(+)-20:29088471(-)__20_29081501_29106501D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:81:3.8:3.8,0,198.5:0:8:-3.64:15.33\n20\t29090598\t870923:2\tG\tG]9:63843968]\t39\tPASS\tDISC_MAPQ=27;EVDNC=DSCRD;IMPRECISE;MAPQ=27;MATEID=870923:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=9:63843968(+)-20:29090598(+)__20_29081501_29106501D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:19:83:39.5:39.5,0,168.2:0:19:-39.39:43.98\n20\t29130127\t871760:1\tA\t]20:29193597]A\t23\tPASS\tDISC_MAPQ=15;EVDNC=DSCRD;IMPRECISE;MAPQ=15;MATEID=871760:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=20:29130127(-)-20:29193597(+)__20_29179501_29204501D;SPAN=63470;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:22:23.6:23.6,0,30.2:0:9:-23.53:23.59\n20\t29152222\t871389:1\tA\t]20:29152743]A\t36\tPASS\tDISC_MAPQ=58;EVDNC=DSCRD;IMPRECISE;MAPQ=58;MATEID=871389:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=20:29152222(-)-20:29152743(+)__20_29130501_29155501D;SPAN=521;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:11:12:3.3:36.3,3.3,0:0:11:-35.86:35.86\n20\t29152583\t870075:2\tC\tC[20:28840894[\t47\tPASS\tDISC_MAPQ=55;EVDNC=ASDIS;HOMSEQ=GTGGAGAAGGAAATATCTTCACATAAAAACTATGCAGAAGCATTCTGAGAAAC;MAPQ=60;MATEID=870075:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_20_28836501_28861501_26C;SPAN=311689;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:18:44:47:47,0,63.5:13:5:-47.05:47.19\n20\t29152743\t871389:2\tT\tT[20:29152222[\t36\tPASS\tDISC_MAPQ=38;EVDNC=DSCRD;IMPRECISE;MAPQ=38;MATEID=871389:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=20:29152222(-)-20:29152743(+)__20_29130501_29155501D;SPAN=521;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:11:12:3.3:36.3,3.3,0:0:11:-35.86:35.86\n20\t29155988\t871853:1\tT\tT[20:29187554[\t75\tPASS\tDISC_MAPQ=42;EVDNC=DSCRD;IMPRECISE;MAPQ=42;MATEID=871853:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=20:29155988(+)-20:29187554(-)__20_29179501_29204501D;SPAN=31566;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:25:14:6.9:75.9,6.9,0:0:25:-75.92:75.92\n20\t29164587\t872074:1\tT\tT[20:29203980[\t23\tPASS\tDISC_MAPQ=15;EVDNC=DSCRD;IMPRECISE;MAPQ=15;MATEID=872074:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=20:29164587(+)-20:29203980(-)__20_29204001_29229001D;SPAN=39393;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:8:5:2.1:23.1,2.1,0:0:8:-23.11:23.11\n20\t29174443\t871670:1\tA\tA[20:29196966[\t42\tPASS\tDISC_MAPQ=29;EVDNC=ASDIS;HOMSEQ=ATAAAAACTACACAGAAGCATTCTGA;MAPQ=28;MATEID=871670:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_29155001_29180001_171C;SPAN=22523;SUBN=1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:14:6:3.9:42.9,3.9,0:12:2:-42.91:42.91\n20\t29187554\t871853:2\tT\t]20:29155988]T\t75\tPASS\tDISC_MAPQ=42;EVDNC=DSCRD;IMPRECISE;MAPQ=42;MATEID=871853:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=20:29155988(+)-20:29187554(-)__20_29179501_29204501D;SPAN=31566;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:25:14:6.9:75.9,6.9,0:0:25:-75.92:75.92\n20\t29189810\t870531:2\tG\t]20:28897172]G\t42\tPASS\tDISC_MAPQ=40;EVDNC=DSCRD;IMPRECISE;MAPQ=40;MATEID=870531:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=20:28897172(+)-20:29189810(-)__20_28885501_28910501D;SPAN=292638;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:15:26:22.4:42.2,0,22.4:0:15:-42.5:42.5\n20\t29193222\t871987:1\tA\t]20:29193786]A\t27\tPASS\tDISC_MAPQ=36;EVDNC=DSCRD;IMPRECISE;MAPQ=36;MATEID=871987:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=20:29193222(-)-20:29193786(+)__20_29179501_29204501D;SPAN=564;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:19:17.9:27.8,0,17.9:0:10:-27.73:27.73\n20\t29193597\t871760:2\tG\tG[20:29130127[\t23\tPASS\tDISC_MAPQ=42;EVDNC=DSCRD;IMPRECISE;MAPQ=42;MATEID=871760:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=20:29130127(-)-20:29193597(+)__20_29179501_29204501D;SPAN=63470;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:22:23.6:23.6,0,30.2:0:9:-23.53:23.59\n20\t29193786\t871987:2\tG\tG[20:29193222[\t27\tPASS\tDISC_MAPQ=40;EVDNC=DSCRD;IMPRECISE;MAPQ=40;MATEID=871987:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=20:29193222(-)-20:29193786(+)__20_29179501_29204501D;SPAN=564;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:19:17.9:27.8,0,17.9:0:10:-27.73:27.73\n20\t29196966\t871670:2\tA\t]20:29174443]A\t42\tPASS\tDISC_MAPQ=19;EVDNC=ASDIS;HOMSEQ=ATAAAAACTACACAGAAGCATTCTGA;MAPQ=60;MATEID=871670:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_29155001_29180001_171C;SPAN=22523;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:14:6:3.9:42.9,3.9,0:12:2:-42.91:42.91\n20\t29203980\t872074:2\tC\t]20:29164587]C\t23\tPASS\tDISC_MAPQ=42;EVDNC=DSCRD;IMPRECISE;MAPQ=42;MATEID=872074:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=20:29164587(+)-20:29203980(-)__20_29204001_29229001D;SPAN=39393;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:8:5:2.1:23.1,2.1,0:0:8:-23.11:23.11\n20\t29204766\t874418:1\tN\t[20:29888901[N\t99\tPASS\tDISC_MAPQ=42;EVDNC=DSCRD;IMPRECISE;MAPQ=42;MATEID=874418:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=20:29204766(-)-20:29888901(-)__20_29865501_29890501D;SPAN=684135;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:68:8:18.9:207.9,18.9,0:0:68:-208:208\n20\t29213586\t872096:1\tA\tA[20:29213887[\t85\tPASS\tDISC_MAPQ=53;EVDNC=ASDIS;HOMSEQ=GAAATATCTTCACATAAAAACTACACAGAAGCATTCTGAGAA;MAPQ=60;MATEID=872096:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_20_29204001_29229001_118C;SPAN=301;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:29:38:9.2:85.1,0,9.2:22:9:-88.4:88.4\n20\t29213887\t872096:2\tG\t]20:29213586]G\t85\tPASS\tDISC_MAPQ=56;EVDNC=ASDIS;HOMSEQ=GAAATATCTTCACATAAAAACTACACAGAAGCATTCTGAGAA;MAPQ=60;MATEID=872096:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_20_29204001_29229001_118C;SPAN=301;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:29:38:9.2:85.1,0,9.2:22:9:-88.4:88.4\n20\t29214602\t872097:1\tA\t]20:29215222]A\t24\tPASS\tDISC_MAPQ=59;EVDNC=DSCRD;IMPRECISE;MAPQ=59;MATEID=872097:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=20:29214602(-)-20:29215222(+)__20_29204001_29229001D;SPAN=620;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:31:24.5:24.5,0,50.9:0:10:-24.3:24.91\n20\t29215222\t872097:2\tA\tA[20:29214602[\t24\tPASS\tDISC_MAPQ=55;EVDNC=DSCRD;IMPRECISE;MAPQ=55;MATEID=872097:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=20:29214602(-)-20:29215222(+)__20_29204001_29229001D;SPAN=620;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:31:24.5:24.5,0,50.9:0:10:-24.3:24.91\n20\t29224086\t872116:1\tT\t]20:29224489]T\t23\tPASS\tDISC_MAPQ=27;EVDNC=ASDIS;HOMSEQ=TCTGCAAAGGGATATTTGTGAGTGCTTTGAGGCCTATGGTGAAACAGGAAATATCTTCAC;MAPQ=60;MATEID=872116:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_20_29204001_29229001_43C;SPAN=403;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:70:23.3:23.3,0,152:11:10:-23.24:28.76\n20\t29224489\t872116:2\tC\tC[20:29224086[\t23\tPASS\tDISC_MAPQ=55;EVDNC=ASDIS;HOMSEQ=TCTGCAAAGGGATATTTGTGAGTGCTTTGAGGCCTATGGTGAAACAGGAAATATCTTCAC;MAPQ=60;MATEID=872116:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_20_29204001_29229001_43C;SPAN=403;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:70:23.3:23.3,0,152:11:10:-23.24:28.76\n20\t29258255\t872237:1\tA\tA]20:29888628]\t39\tPASS\tDISC_MAPQ=36;EVDNC=DSCRD;IMPRECISE;MAPQ=36;MATEID=872237:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=20:29258255(+)-20:29888628(+)__20_29253001_29278001D;SPAN=630373;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:25:22.7:39.2,0,22.7:0:14:-39.39:39.39\n20\t29294840\t872375:1\tA\tA[20:30482683[\t23\tPASS\tDISC_MAPQ=54;EVDNC=DSCRD;IMPRECISE;MAPQ=54;MATEID=872375:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=20:29294840(+)-20:30482683(-)__20_29277501_29302501D;SPAN=1187843;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:34:23.6:23.6,0,59.9:0:10:-23.45:24.42\n20\t29375944\t168761:2\tG\t[3:75703640[G\t66\tPASS\tDISC_MAPQ=39;EVDNC=DSCRD;IMPRECISE;MAPQ=39;MATEID=168761:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=3:75703640(-)-20:29375944(-)__3_75680501_75705501D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:22:26:0.6:66,0.6,0:0:22:-69.34:69.34\n20\t29407505\t872869:2\tA\t[3:75673010[A\t33\tPASS\tDISC_MAPQ=20;EVDNC=DSCRD;IMPRECISE;MAPQ=20;MATEID=872869:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=3:75673010(-)-20:29407505(-)__20_29400001_29425001D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:45:33.5:33.5,0,79.7:0:14:-33.57:34.6\n20\t29412524\t168580:2\tN\tN]3:75668011]\t37\tPASS\tDISC_MAPQ=33;EVDNC=DSCRD;IMPRECISE;MAPQ=33;MATEID=168580:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=3:75668011(+)-20:29412524(+)__3_75656001_75681001D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:15:44:37.1:37.1,0,73.4:0:15:-37.15:37.81\n20\t29418432\t872855:2\tT\tT]3:75662822]\t23\tPASS\tDISC_MAPQ=43;EVDNC=DSCRD;IMPRECISE;MAPQ=43;MATEID=872855:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=3:75662822(+)-20:29418432(+)__20_29400001_29425001D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:23:23.3:23.3,0,33.2:0:9:-23.24:23.37\n20\t29515167\t873050:2\tG\tG]20:29062721]\t37\tPASS\tDISC_MAPQ=19;EVDNC=DSCRD;IMPRECISE;MAPQ=19;MATEID=873050:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=20:29062721(+)-20:29515167(+)__20_29498001_29523001D;SPAN=452446;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:33:37.1:37.1,0,43.7:0:14:-36.94:36.99\n20\t29565353\t875088:1\tN\t[20:30318846[N\t23\tPASS\tDISC_MAPQ=47;EVDNC=DSCRD;IMPRECISE;MAPQ=47;MATEID=875088:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=20:29565353(-)-20:30318846(-)__20_30306501_30331501D;SPAN=753493;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:23:23.3:23.3,0,33.2:0:9:-23.24:23.37\n20\t29636132\t873198:2\tT\t]9:61735346]T\t36\tPASS\tDISC_MAPQ=16;EVDNC=DSCRD;IMPRECISE;MAPQ=16;MATEID=873198:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=9:61735346(+)-20:29636132(-)__20_29620501_29645501D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:23:20:36.5,0,20:0:13:-36.66:36.66\n20\t29700083\t873591:1\tA\tA[20:29703090[\t26\tPASS\tDISC_MAPQ=49;EVDNC=DSCRD;IMPRECISE;MAPQ=49;MATEID=873591:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=20:29700083(+)-20:29703090(-)__20_29694001_29719001D;SPAN=3007;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:37:26:26,0,65.6:0:11:-25.91:26.93\n20\t29703090\t873591:2\tG\t]20:29700083]G\t26\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=873591:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=20:29700083(+)-20:29703090(-)__20_29694001_29719001D;SPAN=3007;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:37:26:26,0,65.6:0:11:-25.91:26.93\n20\t29836455\t874088:1\tA\tA[20:29837181[\t5\tPASS\tEVDNC=ASSMB;INSERTION=T;MAPQ=60;MATEID=874088:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_29816501_29841501_464C;SPAN=726;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:5:38:5.9:5.9,0,88.4:5:0:-5.824:10.24\n20\t29837181\t874088:2\tA\t]20:29836455]A\t5\tPASS\tEVDNC=ASSMB;INSERTION=T;MAPQ=60;MATEID=874088:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_29816501_29841501_464C;SPAN=726;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:5:38:5.9:5.9,0,88.4:5:0:-5.824:10.24\n20\t29851924\t908592:1\tG\t]22:11373695]G\t61\tPASS\tDISC_MAPQ=57;EVDNC=ASDIS;HOMSEQ=GAGCAGTTTTGAAACACTCTTTTTGTAGAATCTGCAAGTGGATATTTGGAG;MAPQ=60;MATEID=908592:2;MATENM=1;NM=6;NUMPARTS=2;SCTG=c_22_11368001_11393001_16C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:22:41:41.3:61.1,0,41.3:9:14:-61.28:61.28\n20\t29888628\t872237:2\tT\tT]20:29258255]\t39\tPASS\tDISC_MAPQ=54;EVDNC=DSCRD;IMPRECISE;MAPQ=54;MATEID=872237:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=20:29258255(+)-20:29888628(+)__20_29253001_29278001D;SPAN=630373;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:25:22.7:39.2,0,22.7:0:14:-39.39:39.39\n20\t29888901\t874418:2\tA\t[20:29204766[A\t99\tPASS\tDISC_MAPQ=56;EVDNC=DSCRD;IMPRECISE;MAPQ=56;MATEID=874418:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=20:29204766(-)-20:29888901(-)__20_29865501_29890501D;SPAN=684135;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:68:8:18.9:207.9,18.9,0:0:68:-208:208\n20\t29983825\t874677:1\tA\tA[20:30140273[\t99\tPASS\tDISC_MAPQ=48;EVDNC=TSI_L;HOMSEQ=AAAGGAAATATCTTCACATAAAAACTAGACAGA;MAPQ=56;MATEID=874677:2;MATENM=11;NM=1;NUMPARTS=3;SCTG=c_20_29963501_29988501_205C;SPAN=156448;SUBN=6;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:87:26:24.3:267.3,24.3,0:71:25:-267.4:267.4\n20\t30140273\t874677:2\tA\t]20:29983825]A\t99\tPASS\tDISC_MAPQ=11;EVDNC=TSI_L;HOMSEQ=AAAGGAAATATCTTCACATAAAAACTAGACAGA;MAPQ=33;MATEID=874677:1;MATENM=1;NM=11;NUMPARTS=3;SCTG=c_20_29963501_29988501_205C;SPAN=156448;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:87:26:24.3:267.3,24.3,0:71:25:-267.4:267.4\n20\t30318846\t875088:2\tG\t[20:29565353[G\t23\tPASS\tDISC_MAPQ=29;EVDNC=DSCRD;IMPRECISE;MAPQ=29;MATEID=875088:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=20:29565353(-)-20:30318846(-)__20_30306501_30331501D;SPAN=753493;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:23:23.3:23.3,0,33.2:0:9:-23.24:23.37\n20\t30482683\t872375:2\tT\t]20:29294840]T\t23\tPASS\tDISC_MAPQ=22;EVDNC=DSCRD;IMPRECISE;MAPQ=22;MATEID=872375:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=20:29294840(+)-20:30482683(-)__20_29277501_29302501D;SPAN=1187843;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:34:23.6:23.6,0,59.9:0:10:-23.45:24.42\n20\t30502676\t875478:2\tG\t]2:132270852]G\t59\tPASS\tDISC_MAPQ=33;EVDNC=DSCRD;IMPRECISE;MAPQ=33;MATEID=875478:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=2:132270852(+)-20:30502676(-)__20_30502501_30527501D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:18:20:5.4:59.4,5.4,0:0:18:-58.15:58.15\n20\t30594240\t998499:1\tG\t]Un_JTFH01000605v1_decoy:968]G\t29\tPASS\tEVDNC=ASSMB;HOMSEQ=GC;MAPQ=60;MATEID=998499:2;MATENM=1;NM=0;NUMPARTS=3;SCTG=c_1448_1_1389_5C;SPAN=-1;SUBN=2;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:13:2.9:29.3,0,2.9:10:0:-30.55:30.55\n20\t30926139\t876115:2\tT\t[19:27365941[T\t68\tPASS\tDISC_MAPQ=6;EVDNC=TSI_L;HOMSEQ=TGCATATTCTACAGAAAGACTGTTTCCAAA;MAPQ=19;MATEID=876115:1;MATENM=0;NM=5;NUMPARTS=3;REPSEQ=TT;SCTG=c_20_30919001_30944001_257C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:29:98:68.3:68.3,0,177.2:26:4:-68.18:70.92\n20\t31487269\t878350:1\tG\t]20:31768542]G\t49\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=G;MAPQ=60;MATEID=878350:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_31752001_31777001_19C;SPAN=281273;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:17:17:4.5:49.5,4.5,0:15:8:-49.51:49.51\n20\t31768542\t878350:2\tG\tG[20:31487269[\t49\tPASS\tDISC_MAPQ=55;EVDNC=ASDIS;HOMSEQ=G;MAPQ=60;MATEID=878350:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_31752001_31777001_19C;SPAN=281273;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:17:17:4.5:49.5,4.5,0:15:8:-49.51:49.51\n20\t32723074\t878580:1\tG\tG[20:32724972[\t66\tPASS\tEVDNC=ASSMB;HOMSEQ=AAAGACTTGTG;MAPQ=60;MATEID=878580:2;MATENM=0;NM=8;NUMPARTS=2;SCTG=c_20_32707501_32732501_73C;SPAN=1898;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:22:11:6:66,6,0:22:0:-66.02:66.02\n20\t32724972\t878580:2\tA\t]20:32723074]A\t66\tPASS\tEVDNC=ASSMB;HOMSEQ=AAAGACTTGTG;MAPQ=60;MATEID=878580:1;MATENM=8;NM=0;NUMPARTS=2;SCTG=c_20_32707501_32732501_73C;SPAN=1898;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:22:11:6:66,6,0:22:0:-66.02:66.02\n20\t34228132\t878957:1\tC\tC[20:34231420[\t0\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TAGAACTTTC;MAPQ=60;MATEID=878957:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_34226501_34251501_29C;SPAN=3288;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/0:15:1244:99:0,299.7,3733:10:9:300.2:14.95\n20\t34231420\t878957:2\tT\t]20:34228132]T\t0\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TAGAACTTTC;MAPQ=60;MATEID=878957:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_34226501_34251501_29C;SPAN=3288;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/0:15:1244:99:0,299.7,3733:10:9:300.2:14.95\n20\t34528026\t879054:1\tT\tT[20:34528340[\t27\tPASS\tEVDNC=ASSMB;HOMSEQ=AAAAACTACCCTACTGGAGT;MAPQ=60;MATEID=879054:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_34520501_34545501_37C;SPAN=314;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:21:23.9:27.2,0,23.9:10:0:-27.11:27.11\n20\t34528340\t879054:2\tA\t]20:34528026]A\t27\tPASS\tEVDNC=ASSMB;HOMSEQ=AAAAACTACCCTACTGGAGT;MAPQ=60;MATEID=879054:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_34520501_34545501_37C;SPAN=314;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:21:23.9:27.2,0,23.9:10:0:-27.11:27.11\n20\t35033863\t879169:1\tA\tA[20:35034175[\t17\tPASS\tEVDNC=ASSMB;HOMSEQ=AAAAGAGTAAA;MAPQ=60;MATEID=879169:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_20_35010501_35035501_48C;SPAN=312;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:43:17.6:17.6,0,90.2:9:0:-17.62:20.44\n20\t35034175\t879169:2\tA\t]20:35033863]A\t17\tPASS\tEVDNC=ASSMB;HOMSEQ=AAAAGAGTAAA;MAPQ=60;MATEID=879169:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_20_35010501_35035501_48C;SPAN=312;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:43:17.6:17.6,0,90.2:9:0:-17.62:20.44\n20\t35041059\t879174:1\tA\t]20:35041155]A\t8\tPASS\tEVDNC=ASSMB;HOMSEQ=A;MAPQ=60;MATEID=879174:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_35035001_35060001_27C;SPAN=96;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:5:27:8.9:8.9,0,58.4:5:0:-8.916:11.05\n20\t35041155\t879174:2\tA\tA[20:35041059[\t8\tPASS\tEVDNC=ASSMB;HOMSEQ=A;MAPQ=60;MATEID=879174:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_35035001_35060001_27C;SPAN=96;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:5:27:8.9:8.9,0,58.4:5:0:-8.916:11.05\n20\t35564373\t879364:1\tA\t]20:35564522]A\t52\tPASS\tEVDNC=ASSMB;HOMSEQ=A;MAPQ=60;MATEID=879364:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_35549501_35574501_16C;SPAN=149;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:20:48:52.7:52.7,0,65.9:20:0:-52.53:52.64\n20\t35564522\t879364:2\tA\tA[20:35564373[\t52\tPASS\tEVDNC=ASSMB;HOMSEQ=A;MAPQ=60;MATEID=879364:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_35549501_35574501_16C;SPAN=149;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:20:48:52.7:52.7,0,65.9:20:0:-52.53:52.64\n20\t38793597\t880214:1\tC\t]20:38793774]C\t11\tPASS\tEVDNC=ASSMB;HOMSEQ=C;MAPQ=60;MATEID=880214:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_38783501_38808501_31C;SPAN=177;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:6:32:11:11,0,67.1:6:0:-10.81:13.3\n20\t38793774\t880214:2\tC\tC[20:38793597[\t11\tPASS\tEVDNC=ASSMB;HOMSEQ=C;MAPQ=60;MATEID=880214:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_38783501_38808501_31C;SPAN=177;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:6:32:11:11,0,67.1:6:0:-10.81:13.3\n20\t40861608\t880606:2\tG\t[1:119717902[G\t99\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;MAPQ=60;MATEID=880606:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_40841501_40866501_68C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:52:21:14.4:158.4,14.4,0:29:38:-158.4:158.4\n20\t40863081\t880611:1\tC\tC[20:40871469[\t99\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=880611:2;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_20_40866001_40891001_69C;SPAN=8388;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:35:25:9.6:105.6,9.6,0:35:0:-105.6:105.6\n20\t40871469\t880611:2\tT\t]20:40863081]T\t99\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=880611:1;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_20_40866001_40891001_69C;SPAN=8388;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:35:25:9.6:105.6,9.6,0:35:0:-105.6:105.6\n20\t40888416\t881229:1\tG\t]20:42600872]G\t12\tPASS\tEVDNC=ASSMB;HOMSEQ=GT;MAPQ=60;MATEID=881229:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_42581001_42606001_108C;SPAN=1712456;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:51:12.2:12.2,0,114.5:8:0:-12.07:17.05\n20\t41014579\t880709:1\tT\t]20:41077934]T\t33\tPASS\tEVDNC=ASSMB;HOMSEQ=TGG;MAPQ=60;MATEID=880709:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_41062001_41087001_8C;SPAN=63355;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:44:33.8:33.8,0,76.7:14:0:-33.85:34.77\n20\t41077934\t880709:2\tG\tG[20:41014579[\t33\tPASS\tEVDNC=ASSMB;HOMSEQ=TGG;MAPQ=60;MATEID=880709:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_41062001_41087001_8C;SPAN=63355;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:44:33.8:33.8,0,76.7:14:0:-33.85:34.77\n20\t41100800\t880736:1\tA\t]20:41153377]A\t37\tPASS\tEVDNC=ASSMB;INSERTION=TCATCTGCAGCCTCAAACCC;MAPQ=60;MATEID=880736:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_41135501_41160501_11C;SPAN=52577;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:16:54:37.7:37.7,0,97.1:16:0:-37.64:39.14\n20\t41153377\t880736:2\tC\tC[20:41100800[\t37\tPASS\tEVDNC=ASSMB;INSERTION=TCATCTGCAGCCTCAAACCC;MAPQ=60;MATEID=880736:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_41135501_41160501_11C;SPAN=52577;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:16:54:37.7:37.7,0,97.1:16:0:-37.64:39.14\n20\t41277735\t880780:1\tG\tG[20:41278845[\t99\tPASS\tDISC_MAPQ=54;EVDNC=ASDIS;HOMSEQ=TCACTGCAAGCTCCGCCTCCCGGGTTCATGCCATTCTCCTGCCTCAGCCTCCTGAGTAGCTGGGACTACAGG;MAPQ=60;MATEID=880780:2;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_20_41258001_41283001_45C;SPAN=1110;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:50:50:13.8:151.8,13.8,0:28:32:-151.8:151.8\n20\t41278845\t880780:2\tT\t]20:41277735]T\t99\tPASS\tDISC_MAPQ=56;EVDNC=ASDIS;HOMSEQ=TCACTGCAAGCTCCGCCTCCCGGGTTCATGCCATTCTCCTGCCTCAGCCTCCTGAGTAGCTGGGACTACAGG;MAPQ=60;MATEID=880780:1;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_20_41258001_41283001_45C;SPAN=1110;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:50:50:13.8:151.8,13.8,0:28:32:-151.8:151.8\n20\t42187003\t881086:1\tT\t[20:57243066[T\t99\tPASS\tDISC_MAPQ=57;EVDNC=ASDIS;HOMSEQ=TC;MAPQ=60;MATEID=881086:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_42164501_42189501_4C;SPAN=15056063;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:35:50:22.4:101.6,0,22.4:17:25:-104.1:104.1\n20\t42213358\t881105:1\tT\t]20:42215833]T\t23\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=881105:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=20:42213358(-)-20:42215833(+)__20_42213501_42238501D;SPAN=2475;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:44:23.9:23.9,0,86.6:0:11:-23.94:25.95\n20\t42215833\t881105:2\tC\tC[20:42213358[\t23\tPASS\tDISC_MAPQ=47;EVDNC=DSCRD;IMPRECISE;MAPQ=47;MATEID=881105:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=20:42213358(-)-20:42215833(+)__20_42213501_42238501D;SPAN=2475;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:44:23.9:23.9,0,86.6:0:11:-23.94:25.95\n20\t42220432\t881117:1\tC\t]20:42244661]C\t58\tPASS\tEVDNC=ASSMB;HOMSEQ=C;MAPQ=60;MATEID=881117:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_42238001_42263001_7C;SPAN=24229;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:21:40:41.6:58.1,0,41.6:21:0:-58.2:58.2\n20\t42241304\t883732:1\tG\t]20:49308943]G\t99\tPASS\tEVDNC=ASSMB;HOMSEQ=GGA;MAPQ=60;MATEID=883732:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_49294001_49319001_43C;SPAN=7067639;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:31:34:9.3:102.3,9.3,0:31:0:-100.8:100.8\n20\t42244661\t881117:2\tC\tC[20:42220432[\t58\tPASS\tEVDNC=ASSMB;HOMSEQ=C;MAPQ=60;MATEID=881117:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_42238001_42263001_7C;SPAN=24229;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:21:40:41.6:58.1,0,41.6:21:0:-58.2:58.2\n20\t42374557\t881140:2\tC\t[17:58625792[C\t99\tPASS\tDISC_MAPQ=57;EVDNC=ASDIS;HOMSEQ=C;MAPQ=60;MATEID=881140:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_42360501_42385501_15C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:49:34:13.5:148.5,13.5,0:31:28:-148.5:148.5\n20\t42447943\t881169:2\tT\t]1:114822463]T\t99\tPASS\tEVDNC=ASSMB;HOMSEQ=T;MAPQ=60;MATEID=881169:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_42434001_42459001_33C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:51:41:14.1:155.1,14.1,0:51:0:-155.1:155.1\n20\t42600872\t881229:2\tT\tT[20:40888416[\t12\tPASS\tEVDNC=ASSMB;HOMSEQ=GT;MAPQ=60;MATEID=881229:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_42581001_42606001_108C;SPAN=1712456;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:51:12.2:12.2,0,114.5:8:0:-12.07:17.05\n20\t42679541\t881265:2\tG\tG[1:119844586[\t99\tPASS\tEVDNC=ASSMB;HOMSEQ=GG;MAPQ=60;MATEID=881265:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_20_42679001_42704001_19C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:40:27:11.1:122.1,11.1,0:40:0:-122.1:122.1\n20\t43396070\t881430:1\tT\tT[20:43397151[\t89\tPASS\tDISC_MAPQ=57;EVDNC=DSCRD;IMPRECISE;MAPQ=57;MATEID=881430:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=20:43396070(+)-20:43397151(-)__20_43389501_43414501D;SPAN=1081;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:29:6:8.1:89.1,8.1,0:0:29:-89.12:89.12\n20\t43397151\t881430:2\tA\t]20:43396070]A\t89\tPASS\tDISC_MAPQ=57;EVDNC=DSCRD;IMPRECISE;MAPQ=57;MATEID=881430:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=20:43396070(+)-20:43397151(-)__20_43389501_43414501D;SPAN=1081;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:29:6:8.1:89.1,8.1,0:0:29:-89.12:89.12\n20\t43568137\t881500:1\tG\t]20:50015936]G\t62\tPASS\tEVDNC=ASSMB;HOMSEQ=GG;MAPQ=60;MATEID=881500:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_43561001_43586001_0C;SPAN=6447799;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:20:21:5.7:62.7,5.7,0:20:0:-62.72:62.72\n20\t43595420\t883769:1\tG\t]20:49349984]G\t99\tPASS\tDISC_MAPQ=54;EVDNC=ASDIS;HOMSEQ=GTGC;MAPQ=60;MATEID=883769:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_49343001_49368001_42C;SPAN=5754564;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:36:28:9.9:108.9,9.9,0:26:24:-108.9:108.9\n20\t43643335\t881547:1\tA\tA[20:43645931[\t92\tPASS\tDISC_MAPQ=46;EVDNC=DSCRD;IMPRECISE;MAPQ=46;MATEID=881547:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=20:43643335(+)-20:43645931(-)__20_43634501_43659501D;SPAN=2596;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:30:1:8.4:92.4,8.4,0:0:30:-92.42:92.42\n20\t43645931\t881547:2\tC\t]20:43643335]C\t92\tPASS\tDISC_MAPQ=52;EVDNC=DSCRD;IMPRECISE;MAPQ=52;MATEID=881547:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=20:43643335(+)-20:43645931(-)__20_43634501_43659501D;SPAN=2596;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:30:1:8.4:92.4,8.4,0:0:30:-92.42:92.42\n20\t43696487\t881586:1\tC\t]20:43697013]C\t80\tPASS\tEVDNC=ASSMB;HOMSEQ=CTGGGATTACAGGCGTGAGCCAC;MAPQ=60;MATEID=881586:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_43683501_43708501_25C;SPAN=526;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:31:78:80.6:80.6,0,113.6:31:0:-80.41:80.76\n20\t43697013\t881586:2\tC\tC[20:43696487[\t80\tPASS\tEVDNC=ASSMB;HOMSEQ=CTGGGATTACAGGCGTGAGCCAC;MAPQ=60;MATEID=881586:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_43683501_43708501_25C;SPAN=526;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:31:78:80.6:80.6,0,113.6:31:0:-80.41:80.76\n20\t44025527\t99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\tA\tA[20:42241304[\t99\tPASS\tEVDNC=ASSMB;HOMSEQ=GGA;MAPQ=60;MATEID=883732:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_49294001_49319001_43C;SPAN=7067639;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:31:34:9.3:102.3,9.3,0:31:0:-100.8:100.8\n20\t49309026\t883730:2\tA\t]1:113786165]A\t47\tPASS\tEVDNC=ASSMB;HOMSEQ=AGAT;MAPQ=60;MATEID=883730:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_49294001_49319001_84C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:17:32:30.8:47.3,0,30.8:17:0:-47.25:47.25\n20\t49325638\t883756:1\tT\t]20:49325721]T\t73\tPASS\tDISC_MAPQ=255;EVDNC=TSI_G;INSERTION=TTGTGAGAATTAAATGAAGTCATGTATGGGACTTGCTTGGTTTAGCATCCAAAGCACAATGAACAGGGTTATTAGATGGATGTTGTGAGAATTAAATGAAGTCATGTATGGGACTTGCTTGGTTTAGCATCCAAAGCACAATGAACGGGGTTATTAGATGGA;MAPQ=60;MATEID=883756:2;MATENM=0;NM=0;NUMPARTS=3;SCTG=c_20_49318501_49343501_41C;SPAN=83;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:31:104:73.1:73.1,0,188.6:31:0:-73.1:75.93\n20\t49325721\t883756:2\tG\tG[20:49325638[\t73\tPASS\tDISC_MAPQ=255;EVDNC=TSI_G;INSERTION=TTGTGAGAATTAAATGAAGTCATGTATGGGACTTGCTTGGTTTAGCATCCAAAGCACAATGAACAGGGTTATTAGATGGATGTTGTGAGAATTAAATGAAGTCATGTATGGGACTTGCTTGGTTTAGCATCCAAAGCACAATGAACGGGGTTATTAGATGGA;MAPQ=60;MATEID=883756:1;MATENM=0;NM=0;NUMPARTS=3;SCTG=c_20_49318501_49343501_41C;SPAN=83;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:31:104:73.1:73.1,0,188.6:31:0:-73.1:75.93\n20\t49349984\t883769:2\tC\tC[20:43595420[\t99\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=GTGC;MAPQ=60;MATEID=883769:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_49343001_49368001_42C;SPAN=5754564;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:36:28:9.9:108.9,9.9,0:26:24:-108.9:108.9\n20\t49351536\t885112:1\tT\t[20:52068428[T\t70\tPASS\tDISC_MAPQ=55;EVDNC=ASDIS;HOMSEQ=T;MAPQ=60;MATEID=885112:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_52062501_52087501_17C;SPAN=2716892;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:24:31:4.7:70.7,0,4.7:19:10:-73.47:73.47\n20\t49875445\t883982:2\tG\t[17:82953195[G\t95\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AC;MAPQ=60;MATEID=883982:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_49857501_49882501_45C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:32:31:8.7:95.7,8.7,0:24:12:-95.72:95.72\n20\t50015936\t881500:2\tG\tG[20:43568137[\t62\tPASS\tEVDNC=ASSMB;HOMSEQ=GG;MAPQ=60;MATEID=881500:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_43561001_43586001_0C;SPAN=6447799;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:20:21:5.7:62.7,5.7,0:20:0:-62.72:62.72\n20\t50110068\t884135:2\tG\t[17:61398559[G\t17\tPASS\tDISC_MAPQ=51;EVDNC=ASDIS;HOMSEQ=GGC;MAPQ=60;MATEID=884135:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_50102501_50127501_30C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:34:17:17,0,66.5:4:6:-16.85:18.63\n20\t50678547\t889981:1\tG\t[20:63864221[G\t44\tPASS\tDISC_MAPQ=255;EVDNC=ASDIS;HOMSEQ=C;MAPQ=60;MATEID=889981:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_63847001_63872001_13C;SPAN=13185674;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:16:29:28.1:44.6,0,28.1:6:10:-44.86:44.86\n20\t50816138\t884415:1\tG\t]20:50816769]G\t75\tPASS\tEVDNC=ASSMB;HOMSEQ=GCCTCAGCCTCCTGAGTAGCTGGGACTACAGAC;MAPQ=60;MATEID=884415:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_20_50813001_50838001_17C;SPAN=631;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:29:73:75.2:75.2,0,108.2:29:0:-75.21:75.54\n20\t50816769\t884415:2\tC\tC[20:50816138[\t75\tPASS\tEVDNC=ASSMB;HOMSEQ=GCCTCAGCCTCCTGAGTAGCTGGGACTACAGAC;MAPQ=60;MATEID=884415:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_20_50813001_50838001_17C;SPAN=631;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:29:73:75.2:75.2,0,108.2:29:0:-75.21:75.54\n20\t51129425\t884509:2\tG\t[1:107571647[G\t99\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;MAPQ=60;MATEID=884509:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_51107001_51132001_42C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:35:38:10.5:115.5,10.5,0:22:32:-114.4:114.4\n20\t51227568\t884570:2\tC\t[20:47911413[C\t36\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=C;MAPQ=60;MATEID=884570:1;MATENM=1;NM=2;NUMPARTS=2;SCTG=c_20_51205001_51230001_24C;SPAN=3316155;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:15:46:36.8:36.8,0,76.4:12:4:-36.59:37.45\n20\t51228057\t884572:2\tT\tT[20:47941032[\t29\tPASS\tEVDNC=ASSMB;HOMSEQ=CT;MAPQ=60;MATEID=884572:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_51205001_51230001_7C;SPAN=3287025;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:47:29.9:29.9,0,86:13:0:-29.7:31.34\n20\t51569452\t889168:1\tG\t[20:62201797[G\t24\tPASS\tDISC_MAPQ=255;EVDNC=ASDIS;HOMSEQ=TATC;MAPQ=60;MATEID=889168:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_62181001_62206001_66C;SPAN=10632345;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:31:24.5:24.5,0,50.9:7:8:-24.3:24.91\n20\t52003779\t885044:2\tA\tA[17:75280201[\t61\tPASS\tEVDNC=ASSMB;INSERTION=G;MAPQ=60;MATEID=885044:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_51989001_52014001_51C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:22:39:35.3:61.7,0,35.3:22:0:-62:62\n20\t52041378\t885085:2\tT\tT[20:47926746[\t37\tPASS\tEVDNC=ASSMB;HOMSEQ=T;MAPQ=60;MATEID=885085:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_52038001_52063001_110C;SPAN=4114632;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:33:37.1:37.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G=c_20_58481501_58506501_64C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:59:26.3:26.3,0,122:11:2:-26.33:29.85\n20\t58564979\t887490:1\tC\tC[20:58565296[\t0\tPASS\tEVDNC=ASSMB;HOMSEQ=CTGGGATTACAGGCGTGAGCCAC;MAPQ=60;MATEID=887490:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_58555001_58580001_7C;SPAN=317;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/0:7:104:6:0,6,273.9:7:0:6.127:12.2\n20\t58565296\t887490:2\tC\t]20:58564979]C\t0\tPASS\tEVDNC=ASSMB;HOMSEQ=CTGGGATTACAGGCGTGAGCCAC;MAPQ=60;MATEID=887490:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_58555001_58580001_7C;SPAN=317;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/0:7:104:6:0,6,273.9:7:0:6.127:12.2\n20\t59000016\t887724:1\tC\tC[20:59000298[\t0\tPASS\tEVDNC=ASSMB;HOMSEQ=AACCCGGGAGGCGGAGGTTGCAGTGAGC;MAPQ=60;MATEID=887724:2;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_20_58996001_59021001_31C;SPAN=282;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/0:6:94:6.3:0,6.3,247.5:6:0:6.617:10.32\n20\t59000298\t887724:2\tA\t]20:59000016]A\t0\tPASS\tEVDNC=ASSMB;HOMSEQ=AACCCGGGAGGCGGAGGTTGCAGTGAGC;MAPQ=60;MATEID=887724:1;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_20_58996001_59021001_31C;SPAN=282;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/0:6:94:6.3:0,6.3,247.5:6:0:6.617:10.32\n20\t59473634\t887898:2\tC\t[17:48813086[C\t13\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AG;MAPQ=60;MATEID=887898:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_59461501_59486501_31C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:48:13.1:13.1,0,105.5:4:6:-12.92:17.28\n20\t59474085\t887899:2\tT\t[20:56932721[T\t30\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=T;MAPQ=60;MATEID=887899:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_59461501_59486501_12C;SPAN=2541364;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:56:30.5:30.5,0,109.7:10:7:-30.47:33.03\n20\t59554986\t887941:1\tG\tG[20:59640392[\t21\tPASS\tEVDNC=ASSMB;HOMSEQ=CTGG;MAPQ=60;MATEID=887941:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_59535001_59560001_9C;SPAN=85406;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:30:21.2:21.2,0,54.2:9:0:-21.28:22.07\n20\t59640392\t887941:2\tC\t]20:59554986]C\t21\tPASS\tEVDNC=ASSMB;HOMSEQ=CTGG;MAPQ=60;MATEID=887941:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_59535001_59560001_9C;SPAN=85406;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:30:21.2:21.2,0,54.2:9:0:-21.28:22.07\n20\t60270342\t888229:2\tT\t[17:61210341[T\t99\tPASS\tDISC_MAPQ=58;EVDNC=ASDIS;HOMSEQ=TGTG;MAPQ=60;MATEID=888229:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_60270001_60295001_15C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:97:155:99:276.8,0,111.8:59:56:-280.3:280.3\n20\t60314398\t888245:1\tT\t]20:60314900]T\t4\tPASS\tDISC_MAPQ=42;EVDNC=DSCRD;IMPRECISE;MAPQ=42;MATEID=888245:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=20:60314398(-)-20:60314900(+)__20_60294501_60319501D;SPAN=502;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:80:4.1:4.1,0,195.5:0:8:-3.921:15.38\n20\t60314900\t888245:2\tC\tC[20:60314398[\t4\tPASS\tDISC_MAPQ=48;EVDNC=DSCRD;IMPRECISE;MAPQ=48;MATEID=888245:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=20:60314398(-)-20:60314900(+)__20_60294501_60319501D;SPAN=502;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:80:4.1:4.1,0,195.5:0:8:-3.921:15.38\n20\t60621324\t888361:1\tA\tA[20:60622238[\t0\tPASS\tEVDNC=ASSMB;HOMSEQ=A;MAPQ=60;MATEID=888361:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_60613001_60638001_18C;SPAN=914;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/0:6:85:3.9:0,3.9,221.1:6:0:4.087:10.59\n20\t60622238\t888361:2\tA\t]20:60621324]A\t0\tPASS\tEVDNC=ASSMB;HOMSEQ=A;MAPQ=60;MATEID=888361:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_60613001_60638001_18C;SPAN=914;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/0:6:85:3.9:0,3.9,221.1:6:0:4.087:10.59\n20\t61007224\t888548:1\tA\tA[20:61030462[\t24\tPASS\tEVDNC=ASSMB;HOMSEQ=CA;MAPQ=60;MATEID=888548:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_61029501_61054501_3C;SPAN=23238;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:42:24.5:24.5,0,80.6:11:0:-24.51:26.21\n20\t61030462\t888548:2\tC\t]20:61007224]C\t24\tPASS\tEVDNC=ASSMB;HOMSEQ=CA;MAPQ=60;MATEID=888548:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_61029501_61054501_3C;SPAN=23238;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:42:24.5:24.5,0,80.6:11:0:-24.51:26.21\n20\t61329284\t888678:1\tT\t]20:61329445]T\t99\tPASS\tEVDNC=ASSMB;INSERTION=TCGTGGGTCTGGGACGCGGGTCGAGGTGGC;MAPQ=60;MATEID=888678:2;MATENM=2;NM=5;NUMPARTS=2;SCTG=c_20_61323501_61348501_127C;SPAN=161;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:43:151:99:99.5,0,281:43:0:-99.5:104.3\n20\t61329445\t888678:2\tC\tC[20:61329284[\t99\tPASS\tEVDNC=ASSMB;INSERTION=TCGTGGGTCTGGGACGCGGGTCGAGGTGGC;MAPQ=60;MATEID=888678:1;MATENM=5;NM=2;NUMPARTS=2;SCTG=c_20_61323501_61348501_127C;SPAN=161;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:43:151:99:99.5,0,281:43:0:-99.5:104.3\n20\t61337291\t888671:2\tA\t]1:7429774]A\t16\tPASS\tDISC_MAPQ=36;EVDNC=DSCRD;IMPRECISE;MAPQ=36;MATEID=888671:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:7429774(+)-20:61337291(-)__20_61323501_61348501D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:59:16.4:16.4,0,131.9:0:10:-16.43:21.68\n20\t61529111\t810968:2\tA\tA]17:62660892]\t60\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=810968:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=17:62660892(+)-20:61529111(+)__17_62646501_62671501D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:21:32:17.6:60.5,0,17.6:0:21:-61.42:61.42\n20\t61945453\t889051:1\tG\t]20:61946491]G\t28\tPASS\tDISC_MAPQ=48;EVDNC=DSCRD;IMPRECISE;MAPQ=48;MATEID=889051:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=20:61945453(-)-20:61946491(+)__20_61936001_61961001D;SPAN=1038;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:40:28.4:28.4,0,71.3:0:12:-28.37:29.43\n20\t61946491\t889051:2\tG\tG[20:61945453[\t28\tPASS\tDISC_MAPQ=35;EVDNC=DSCRD;IMPRECISE;MAPQ=35;MATEID=889051:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=20:61945453(-)-20:61946491(+)__20_61936001_61961001D;SPAN=1038;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:40:28.4:28.4,0,71.3:0:12:-28.37:29.43\n20\t62169401\t889179:1\tT\tT]20:62211164]\t18\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=889179:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=20:62169401(+)-20:62211164(+)__20_62205501_62230501D;SPAN=41763;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:28:18.5:18.5,0,51.5:0:8:-18.54:19.42\n20\t62201797\t889168:2\tT\t[20:51569452[T\t24\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TATC;MAPQ=60;MATEID=889168:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_20_62181001_62206001_66C;SPAN=10632345;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:31:24.5:24.5,0,50.9:7:8:-24.3:24.91\n20\t62211164\t889179:2\tC\tC]20:62169401]\t18\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=889179:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=20:62169401(+)-20:62211164(+)__20_62205501_62230501D;SPAN=41763;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:28:18.5:18.5,0,51.5:0:8:-18.54:19.42\n21\t6070645\t891075:2\tT\tT]1:248752958]\t26\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=891075:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=1:248752958(+)-21:6070645(+)__21_6051501_6076501D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:9:2:2.4:26.4,2.4,0:0:9:-26.41:26.41\n21\t6374495\t891103:1\tG\tG[21:6374996[\t52\tPASS\tDISC_MAPQ=16;EVDNC=ASDIS;INSERTION=AGGGGCT;MAPQ=16;MATEID=891103:2;MATENM=2;NM=6;NUMPARTS=2;SCTG=c_21_6370001_6395001_27C;SPAN=501;SUBN=1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:21:60:52.4:52.4,0,98.6:15:8:-52.46:53.23\n21\t6374996\t891103:2\tC\t]21:6374495]C\t52\tPASS\tDISC_MAPQ=10;EVDNC=ASDIS;INSERTION=AGGGGCT;MAPQ=44;MATEID=891103:1;MATENM=6;NM=2;NUMPARTS=2;SCTG=c_21_6370001_6395001_27C;SPAN=501;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:21:60:52.4:52.4,0,98.6:15:8:-52.46:53.23\n21\t7957991\t892538:2\tC\tC[20:28728974[\t26\tPASS\tDISC_MAPQ=22;EVDNC=DSCRD;IMPRECISE;MAPQ=22;MATEID=892538:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=20:28728974(-)-21:7957991(+)__21_7938001_7963001D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:15:81:26.9:26.9,0,175.4:0:15:-26.75:33.16\n21\t7969771\t892860:2\tG\t[13:16013417[G\t20\tPASS\tDISC_MAPQ=28;EVDNC=DSCRD;IMPRECISE;MAPQ=28;MATEID=892860:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=13:16013417(-)-21:7969771(-)__21_7962501_7987501D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:35:20:20,0,66.2:0:9:-19.87:21.36\n21\t9008766\t893297:1\tC\tC[21:9019038[\t28\tPASS\tEVDNC=ASSMB;INSERTION=ACACAATGGACAATG;MAPQ=60;MATEID=893297:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_21_9016001_9041001_175C;SPAN=10272;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:16:8.9:28.7,0,8.9:10:0:-28.89:28.89\n21\t9012539\t893275:1\tC\tC[21:9015175[\t29\tPASS\tDISC_MAPQ=23;EVDNC=DSCRD;IMPRECISE;MAPQ=23;MATEID=893275:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=21:9012539(+)-21:9015175(-)__21_8991501_9016501D;SPAN=2636;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:15:73:29:29,0,154.4:0:15:-29:33.92\n21\t9015175\t893275:2\tT\t]21:9012539]T\t29\tPASS\tDISC_MAPQ=34;EVDNC=DSCRD;IMPRECISE;MAPQ=34;MATEID=893275:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=21:9012539(+)-21:9015175(-)__21_8991501_9016501D;SPAN=2636;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:15:73:29:29,0,154.4:0:15:-29:33.92\n21\t9019038\t893297:2\tG\t]21:9008766]G\t28\tPASS\tEVDNC=ASSMB;INSERTION=ACACAATGGACAATG;MAPQ=44;MATEID=893297:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_21_9016001_9041001_175C;SPAN=10272;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:16:8.9:28.7,0,8.9:10:0:-28.89:28.89\n21\t9997182\t894173:1\tG\tG[21:9997486[\t38\tPASS\tDISC_MAPQ=32;EVDNC=ASDIS;HOMSEQ=AGATAATGCAGTAAGG;MAPQ=60;MATEID=894173:2;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_21_9996001_10021001_249C;SPAN=304;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:29:34.7:38,0,34.7:4:10:-38.07:38.07\n21\t9997486\t894173:2\tA\t]21:9997182]A\t38\tPASS\tDISC_MAPQ=37;EVDNC=ASDIS;HOMSEQ=AGATAATGCAGTAAGG;MAPQ=60;MATEID=894173:1;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_21_9996001_10021001_249C;SPAN=304;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:29:34.7:38,0,34.7:4:10:-38.07:38.07\n21\t10271538\t894303:1\tA\t[21:10324402[A\t36\tPASS\tDISC_MAPQ=34;EVDNC=DSCRD;IMPRECISE;MAPQ=34;MATEID=894303:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=21:10271538(-)-21:10324402(-)__21_10265501_10290501D;SPAN=52864;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:12:12:3.3:36.3,3.3,0:0:12:-36.31:36.31\n21\t10324402\t894303:2\tC\t[21:10271538[C\t36\tPASS\tDISC_MAPQ=54;EVDNC=DSCRD;IMPRECISE;MAPQ=54;MATEID=894303:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=21:10271538(-)-21:10324402(-)__21_10265501_10290501D;SPAN=52864;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:12:12:3.3:36.3,3.3,0:0:12:-36.31:36.31\n21\t10489827\t895070:1\tG\t]22:45595928]G\t35\tPASS\tDISC_MAPQ=15;EVDNC=DSCRD;IMPRECISE;MAPQ=15;MATEID=895070:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=21:10489827(-)-22:45595928(+)__21_10486001_10511001D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:26:29:35.6,0,29:0:13:-35.63:35.63\n21\t10543018\t895113:1\tT\tT[21:10543301[\t99\tPASS\tEVDNC=ASSMB;HOMSEQ=CTGACTGTATTCTTTT;MAPQ=60;MATEID=895113:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_21_10535001_10560001_101C;SPAN=283;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:49:28:13.5:148.5,13.5,0:49:0:-148.5:148.5\n21\t10543301\t895113:2\tC\t]21:10543018]C\t99\tPASS\tEVDNC=ASSMB;HOMSEQ=CTGACTGTATTCTTTT;MAPQ=60;MATEID=895113:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_21_10535001_10560001_101C;SPAN=283;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:49:28:13.5:148.5,13.5,0:49:0:-148.5:148.5\n21\t10571807\t895138:1\tG\tG[21:10572230[\t0\tPASS\tEVDNC=ASSMB;HOMSEQ=ACTTGAGGCCAGGAGTTCAAG;MAPQ=60;MATEID=895138:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_21_10559501_10584501_196C;SPAN=423;SUBN=1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/0:4:78:8.4:0,8.4,211.2:4:0:8.721:6.488\n21\t10572230\t895138:2\tA\t]21:10571807]A\t0\tPASS\tEVDNC=ASSMB;HOMSEQ=ACTTGAGGCCAGGAGTTCAAG;MAPQ=60;MATEID=895138:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_21_10559501_10584501_196C;SPAN=423;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/0:4:78:8.4:0,8.4,211.2:4:0:8.721:6.488\n21\t10664259\t895599:1\tT\tT[21:10664824[\t0\tPASS\tEVDNC=ASSMB;HOMSEQ=GAGTCCATTCCATTGCATTCCATTCCATT;MAPQ=60;MATEID=895599:2;MATENM=2;NM=1;NUMPARTS=2;SCTG=c_21_10657501_10682501_180C;SPAN=565;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/0:7:117:9.6:0,9.6,313.5:7:0:9.781:11.83\n21\t10664824\t895599:2\tG\t]21:10664259]G\t0\tPASS\tEVDNC=ASSMB;HOMSEQ=GAGTCCATTCCATTGCATTCCATTCCATT;MAPQ=60;MATEID=895599:1;MATENM=1;NM=2;NUMPARTS=2;SCTG=c_21_10657501_10682501_180C;SPAN=565;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/0:7:117:9.6:0,9.6,313.5:7:0:9.781:11.83\n21\t10722194\t896148:1\tT\tT[21:10728890[\t0\tPASS\tDISC_MAPQ=38;EVDNC=DSCRD;IMPRECISE;MAPQ=38;MATEID=896148:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=21:10722194(+)-21:10728890(-)__21_10706501_10731501D;SPAN=6696;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/0:9:161:15.4:0,15.4,435.7:0:9:15.55:14.94\n21\t10728890\t896148:2\tT\t]21:10722194]T\t0\tPASS\tDISC_MAPQ=19;EVDNC=DSCRD;IMPRECISE;MAPQ=19;MATEID=896148:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=21:10722194(+)-21:10728890(-)__21_10706501_10731501D;SPAN=6696;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/0:9:161:15.4:0,15.4,435.7:0:9:15.55:14.94\n21\t10789057\t896677:2\tT\tT[13:16016553[\t82\tPASS\tDISC_MAPQ=20;EVDNC=ASDIS;HOMSEQ=GAAGCATTCTGAGAAACTTCTTT;MAPQ=56;MATEID=896677:1;MATENM=0;NM=14;NUMPARTS=2;SCTG=c_21_10780001_10805001_326C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:33:95:82.4:82.4,0,155:11:22:-82.23:83.51\n21\t10798083\t896709:2\tT\t[20:28757851[T\t0\tPASS\tDISC_MAPQ=20;EVDNC=DSCRD;IMPRECISE;MAPQ=20;MATEID=896709:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=20:28757851(-)-21:10798083(-)__21_10780001_10805001D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/0:8:151:16:0,16,412.6:0:8:16.04:13.09\n21\t10807278\t896848:1\tT\tT[21:10807788[\t0\tPASS\tDISC_MAPQ=37;EVDNC=ASDIS;HOMSEQ=TTCT;MAPQ=60;MATEID=896848:2;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_21_10804501_10829501_120C;SPAN=510;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/0:12:242:28:0,28,663.4:12:4:28.41:19.29\n21\t10807788\t896848:2\tT\t]21:10807278]T\t0\tPASS\tDISC_MAPQ=13;EVDNC=ASDIS;HOMSEQ=TTCT;MAPQ=27;MATEID=896848:1;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_21_10804501_10829501_120C;SPAN=510;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/0:12:242:28:0,28,663.4:12:4:28.41:19.29\n21\t13444519\t897143:1\tT\tT[21:13445846[\t52\tPASS\tEVDNC=ASSMB;INSERTION=AAGTGCTACTACT;MAPQ=60;MATEID=897143:2;MATENM=4;NM=1;NUMPARTS=2;SCTG=c_21_13426001_13451001_46C;SPAN=1327;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:18:8:4.8:52.8,4.8,0:18:0:-52.81:52.81\n21\t13445846\t897143:2\tA\t]21:13444519]A\t52\tPASS\tEVDNC=ASSMB;INSERTION=AAGTGCTACTACT;MAPQ=60;MATEID=897143:1;MATENM=1;NM=4;NUMPARTS=2;SCTG=c_21_13426001_13451001_46C;SPAN=1327;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:18:8:4.8:52.8,4.8,0:18:0:-52.81:52.81\n21\t17240014\t898019:1\tA\tA[21:17241316[\t46\tPASS\tEVDNC=ASSMB;HOMSEQ=ATA;MAPQ=60;MATEID=898019:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_21_17223501_17248501_5C;SPAN=1302;SUBN=2;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:16:8:4.2:46.2,4.2,0:16:0:-46.21:46.21\n21\t17241316\t898019:2\tA\t]21:17240014]A\t46\tPASS\tEVDNC=ASSMB;HOMSEQ=ATA;MAPQ=60;MATEID=898019:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_21_17223501_17248501_5C;SPAN=1302;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:16:8:4.2:46.2,4.2,0:16:0:-46.21:46.21\n21\t18857736\t898387:2\tC\t]4:76427327]C\t23\tPASS\tDISC_MAPQ=45;EVDNC=DSCRD;IMPRECISE;MAPQ=45;MATEID=898387:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=4:76427327(+)-21:18857736(-)__21_18840501_18865501D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:12:6.5:23,0,6.5:0:8:-23.49:23.49\n21\t21235316\t899250:1\tA\t]21:21423970]A\t91\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=899250:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_21_21413001_21438001_26C;SPAN=188654;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:33:63:65:91.4,0,65:33:0:-91.41:91.41\n21\t21252378\t899423:1\tT\t]21:22048768]T\t19\tPASS\tDISC_MAPQ=255;EVDNC=ASDIS;INSERTION=T;MAPQ=60;MATEID=899423:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_21_22025501_22050501_1C;SPAN=796390;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:7:12:9.8:19.7,0,9.8:3:4:-19.89:19.89\n21\t21279138\t899260:1\tA\t]21:21438423]A\t99\tPASS\tEVDNC=ASSMB;HOMSEQ=AG;MAPQ=60;MATEID=899260:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_21_21437501_21462501_20C;SPAN=159285;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:39:39:10.8:118.8,10.8,0:39:0:-118.8:118.8\n21\t21325912\t899202:1\tT\t]21:21578930]T\t19\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TT;MAPQ=60;MATEID=899202:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_21_21315001_21340001_25C;SPAN=253018;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:61:19.4:19.4,0,131.6:8:4:-19.16:24.18\n21\t21423970\t899250:2\tC\tC[21:21235316[\t91\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=899250:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_21_21413001_21438001_26C;SPAN=188654;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:33:63:65:91.4,0,65:33:0:-91.41:91.41\n21\t21438423\t899260:2\tG\tG[21:21279138[\t99\tPASS\tEVDNC=ASSMB;HOMSEQ=AG;MAPQ=60;MATEID=899260:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_21_21437501_21462501_20C;SPAN=159285;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:39:39:10.8:118.8,10.8,0:39:0:-118.8:118.8\n21\t21461680\t899338:1\tT\t]21:21629146]T\t59\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=899338:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_21_21609001_21634001_13C;SPAN=167466;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:20:18:5.4:59.4,5.4,0:20:0:-59.41:59.41\n21\t21578930\t899202:2\tT\tT[21:21325912[\t19\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TT;MAPQ=60;MATEID=899202:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_21_21315001_21340001_25C;SPAN=253018;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:61:19.4:19.4,0,131.6:8:4:-19.16:24.18\n21\t21629146\t899338:2\tC\tC[21:21461680[\t59\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=899338:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_21_21609001_21634001_13C;SPAN=167466;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:20:18:5.4:59.4,5.4,0:20:0:-59.41:59.41\n21\t22048768\t899423:2\tA\tA[21:21252378[\t19\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;INSERTION=T;MAPQ=60;MATEID=899423:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_21_22025501_22050501_1C;SPAN=796390;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:7:12:9.8:19.7,0,9.8:3:4:-19.89:19.89\n21\t24391796\t900120:1\tA\tA]21:24391873]\t29\tPASS\tDISC_MAPQ=255;EVDNC=TSI_L;HOMSEQ=A;MAPQ=60;MATEID=900120:2;MATENM=2;NM=0;NUMPARTS=3;REPSEQ=ATAT;SCTG=c_21_24377501_24402501_17C;SPAN=77;SUBN=1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:10:10:2.7:29.7,2.7,0:10:0:-29.71:29.71\n21\t24391873\t900120:2\tT\tT]21:24391796]\t29\tPASS\tDISC_MAPQ=255;EVDNC=TSI_L;HOMSEQ=A;MAPQ=60;MATEID=900120:1;MATENM=0;NM=2;NUMPARTS=3;REPSEQ=ATAT;SCTG=c_21_24377501_24402501_17C;SPAN=77;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:10:10:2.7:29.7,2.7,0:10:0:-29.71:29.71\n21\t26001844\t900591:1\tT\t[21:26002386[T\t99\tPASS\tDISC_MAPQ=60;EVDNC=TSI_L;HOMSEQ=GGATCCA;MAPQ=60;MATEID=900591:2;MATENM=0;NM=1;NUMPARTS=3;SCTG=c_21_25994501_26019501_0C;SPAN=542;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:35:30:9.6:105.6,9.6,0:27:25:-105.6:105.6\n21\t26002386\t900591:2\tG\t[21:26001844[G\t99\tPASS\tDISC_MAPQ=60;EVDNC=TSI_L;HOMSEQ=GGATCCA;MAPQ=60;MATEID=900591:1;MATENM=1;NM=0;NUMPARTS=3;SCTG=c_21_25994501_26019501_0C;SPAN=542;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:35:30:9.6:105.6,9.6,0:27:25:-105.6:105.6\n21\t26236436\t900686:1\tT\t]21:26285100]T\t28\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=900686:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=21:26236436(-)-21:26285100(+)__21_26264001_26289001D;SPAN=48664;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:16:8.9:28.7,0,8.9:0:10:-28.89:28.89\n21\t26285100\t900686:2\tT\tT[21:26236436[\t28\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=900686:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=21:26236436(-)-21:26285100(+)__21_26264001_26289001D;SPAN=48664;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:16:8.9:28.7,0,8.9:0:10:-28.89:28.89\n21\t31508958\t902161:1\tC\t]21:31616501]C\t25\tPASS\tDISC_MAPQ=59;EVDNC=ASDIS;INSERTION=CG;MAPQ=60;MATEID=902161:2;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_21_31605001_31630001_6C;SPAN=107543;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:15:12.2:25.4,0,12.2:7:8:-25.74:25.74\n21\t31616501\t902161:2\tG\tG[21:31508958[\t25\tPASS\tDISC_MAPQ=59;EVDNC=ASDIS;INSERTION=CG;MAPQ=60;MATEID=902161:1;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_21_31605001_31630001_6C;SPAN=107543;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:15:12.2:25.4,0,12.2:7:8:-25.74:25.74\n21\t34817147\t902939:1\tT\t]21:34863048]T\t92\tPASS\tEVDNC=ASSMB;HOMSEQ=TC;MAPQ=60;MATEID=902939:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_21_34839001_34864001_12C;SPAN=45901;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:31:21:8.4:92.4,8.4,0:31:0:-92.42:92.42\n21\t34863048\t902939:2\tC\tC[21:34817147[\t92\tPASS\tEVDNC=ASSMB;HOMSEQ=TC;MAPQ=60;MATEID=902939:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_21_34839001_34864001_12C;SPAN=45901;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:31:21:8.4:92.4,8.4,0:31:0:-92.42:92.42\n21\t38009271\t903694:2\tG\t[20:53882695[G\t85\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=G;MAPQ=60;MATEID=903694:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_21_37999501_38024501_1C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:28:22:7.8:85.8,7.8,0:14:18:-85.82:85.82\n21\t38913836\t904003:2\tA\t[6:169996908[A\t99\tPASS\tDISC_MAPQ=41;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=904003:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_21_38906001_38931001_16C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:66:51:18.3:201.3,18.3,0:61:10:-201.3:201.3\n21\t40028389\t904491:1\tT\t[21:40033586[T\t49\tPASS\tDISC_MAPQ=34;EVDNC=DSCRD;IMPRECISE;MAPQ=34;MATEID=904491:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=21:40028389(-)-21:40033586(-)__21_40033001_40058001D;SPAN=5197;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:17:23:6.8:49.7,0,6.8:0:17:-51.34:51.34\n21\t40033586\t904491:2\tT\t[21:40028389[T\t49\tPASS\tDISC_MAPQ=28;EVDNC=DSCRD;IMPRECISE;MAPQ=28;MATEID=904491:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=21:40028389(-)-21:40033586(-)__21_40033001_40058001D;SPAN=5197;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:17:23:6.8:49.7,0,6.8:0:17:-51.34:51.34\n21\t40348105\t904567:1\tA\t]21:40348511]A\t52\tPASS\tDISC_MAPQ=47;EVDNC=ASDIS;HOMSEQ=ATCAGCCACATTATTGCAATCATACCCCATACAGTTCCTATCAGCCACATTATTGCA;MAPQ=60;MATEID=904567:2;MATENM=12;NM=8;NUMPARTS=2;SCTG=c_21_40327001_40352001_0C;SPAN=406;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:22:72:52.4:52.4,0,128.3:17:5:-52.38:54.17\n21\t40348511\t904567:2\tA\tA[21:40348105[\t52\tPASS\tDISC_MAPQ=28;EVDNC=ASDIS;HOMSEQ=ATCAGCCACATTATTGCAATCATACCCCATACAGTTCCTATCAGCCACATTATTGCA;MAPQ=60;MATEID=904567:1;MATENM=8;NM=12;NUMPARTS=2;SCTG=c_21_40327001_40352001_0C;SPAN=406;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:22:72:52.4:52.4,0,128.3:17:5:-52.38:54.17\n21\t41805882\t905116:1\tC\t]21:41806838]C\t52\tPASS\tDISC_MAPQ=255;EVDNC=ASDIS;HOMSEQ=CCTCCATCACTATCATTACCCTCATCACCACCA;MAPQ=60;MATEID=905116:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_21_41797001_41822001_60C;SPAN=956;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:21:62:52.1:52.1,0,101.6:19:2:-51.89:52.86\n21\t41806838\t905116:2\tA\tA[21:41805882[\t52\tPASS\tDISC_MAPQ=49;EVDNC=ASDIS;HOMSEQ=CCTCCATCACTATCATTACCCTCATCACCACCA;MAPQ=60;MATEID=905116:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_21_41797001_41822001_60C;SPAN=956;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:21:62:52.1:52.1,0,101.6:19:2:-51.89:52.86\n21\t41930128\t905195:1\tC\tC[21:41933376[\t99\tPASS\tDISC_MAPQ=59;EVDNC=DSCRD;IMPRECISE;MAPQ=59;MATEID=905195:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=21:41930128(+)-21:41933376(-)__21_41919501_41944501D;SPAN=3248;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:61:12:16.8:184.8,16.8,0:0:61:-184.8:184.8\n21\t41933376\t905195:2\tA\t]21:41930128]A\t99\tPASS\tDISC_MAPQ=57;EVDNC=DSCRD;IMPRECISE;MAPQ=57;MATEID=905195:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=21:41930128(+)-21:41933376(-)__21_41919501_41944501D;SPAN=3248;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:61:12:16.8:184.8,16.8,0:0:61:-184.8:184.8\n21\t42994295\t905513:1\tG\t]Un_JTFH01000298v1_decoy:2143]G\t82\tPASS\tEVDNC=ASSMB;HOMSEQ=GCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCAT;MAPQ=60;MATEID=905513:2;MATENM=0;NM=1;NUMPARTS=3;SCTG=c_21_42973001_42998001_53C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:27:23:7.5:82.5,7.5,0:27:0:-82.52:82.52\n21\t44573789\t905904:1\tA\t]21:44600671]A\t19\tPASS\tDISC_MAPQ=52;EVDNC=DSCRD;IMPRECISE;MAPQ=52;MATEID=905904:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=21:44573789(-)-21:44600671(+)__21_44565501_44590501D;SPAN=26882;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:25:19.4:19.4,0,42.5:0:8:-19.38:19.89\n21\t44600671\t905904:2\tG\tG[21:44573789[\t19\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=905904:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=21:44573789(-)-21:44600671(+)__21_44565501_44590501D;SPAN=26882;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:25:19.4:19.4,0,42.5:0:8:-19.38:19.89\n21\t44817900\t906030:1\tC\t]21:45021320]C\t45\tPASS\tEVDNC=ASSMB;INSERTION=ACAGCTCCAAGGGCCGCAGGAGCGGCGCGCGGCGGCGGAGGCGCC;MAPQ=60;MATEID=906030:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_21_45006501_45031501_13C;SPAN=203420;SUBN=1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:16:25:16.1:45.8,0,16.1:16:0:-46.5:46.5\n21\t45021320\t906030:2\tG\tG[21:44817900[\t45\tPASS\tEVDNC=ASSMB;INSERTION=ACAGCTCCAAGGGCCGCAGGAGCGGCGCGCGGCGGCGGAGGCGCC;MAPQ=60;MATEID=906030:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_21_45006501_45031501_13C;SPAN=203420;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:16:25:16.1:45.8,0,16.1:16:0:-46.5:46.5\n21\t45156011\t906060:1\tC\t]21:45156432]C\t34\tPASS\tDISC_MAPQ=42;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=906060:2;MATENM=1;NM=9;NUMPARTS=2;SCTG=c_21_45153501_45178501_9C;SPAN=421;SUBN=2;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:18:8.3:34.7,0,8.3:5:10:-35.24:35.24\n21\t45156432\t906060:2\tC\tC[21:45156011[\t34\tPASS\tDISC_MAPQ=17;EVDNC=DSCRD;IMPRECISE;MAPQ=0;MATEID=906060:1;MATENM=9;NM=1;NUMPARTS=2;SCTG=c_21_45153501_45178501_9C;SPAN=421;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:18:8.3:34.7,0,8.3:5:10:-35.24:35.24\n21\t46289897\t906534:1\tG\t]21:46290060]G\t58\tPASS\tEVDNC=ASSMB;HOMSEQ=GTGTAAGGTTGTCATAGCCTTTGT;MAPQ=60;MATEID=906534:2;MATENM=4;NM=5;NUMPARTS=2;SCTG=c_21_46280501_46305501_61C;SPAN=163;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:24:74:58.4:58.4,0,127.7:24:0:-58.42:59.85\n21\t46290060\t906534:2\tT\tT[21:46289897[\t58\tPASS\tEVDNC=ASSMB;HOMSEQ=GTGTAAGGTTGTCATAGCCTTTGT;MAPQ=59;MATEID=906534:1;MATENM=5;NM=4;NUMPARTS=2;SCTG=c_21_46280501_46305501_61C;SPAN=163;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:24:74:58.4:58.4,0,127.7:24:0:-58.42:59.85\n21\t46359215\t906568:1\tA\tA[21:46359740[\t99\tPASS\tDISC_MAPQ=58;EVDNC=ASDIS;HOMSEQ=GCCTCCCAAA;MAPQ=60;MATEID=906568:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_21_46354001_46379001_3C;SPAN=525;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:44:14:12.3:135.3,12.3,0:28:29:-135.3:135.3\n21\t46359740\t906568:2\tG\t]21:46359215]G\t99\tPASS\tDISC_MAPQ=59;EVDNC=ASDIS;HOMSEQ=GCCTCCCAAA;MAPQ=60;MATEID=906568:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_21_46354001_46379001_3C;SPAN=525;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:44:14:12.3:135.3,12.3,0:28:29:-135.3:135.3\n21\t46382911\t906579:1\tT\t]21:46384131]T\t45\tPASS\tDISC_MAPQ=49;EVDNC=DSCRD;IMPRECISE;MAPQ=49;MATEID=906579:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=21:46382911(-)-21:46384131(+)__21_46378501_46403501D;SPAN=1220;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:19:62:45.5:45.5,0,108.2:0:19:-45.29:46.81\n21\t46384131\t906579:2\tC\tC[21:46382911[\t45\tPASS\tDISC_MAPQ=20;EVDNC=DSCRD;IMPRECISE;MAPQ=20;MATEID=906579:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=21:46382911(-)-21:46384131(+)__21_46378501_46403501D;SPAN=1220;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:19:62:45.5:45.5,0,108.2:0:19:-45.29:46.81\n22\t10717767\t907105:1\tT\tT[22:10722199[\t62\tPASS\tDISC_MAPQ=43;EVDNC=DSCRD;IMPRECISE;MAPQ=20;MATEID=907105:2;MATENM=10;NM=23;NUMPARTS=2;REPSEQ=GTGT;SCTG=c_22_10706501_10731501_617C;SECONDARY;SPAN=4432;SUBN=1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:26:82:62.9:62.9,0,142.1:13:13:-62.78:64.53\n22\t10722199\t907105:2\tT\t]22:10717767]T\t62\tPASS\tDISC_MAPQ=38;EVDNC=DSCRD;IMPRECISE;MAPQ=0;MATEID=907105:1;MATENM=23;NM=10;NUMPARTS=2;REPSEQ=GTGT;SCTG=c_22_10706501_10731501_617C;SECONDARY;SPAN=4432;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:26:82:62.9:62.9,0,142.1:13:13:-62.78:64.53\n22\t10726871\t907286:1\tA\tA[22:10728283[\t76\tPASS\tEVDNC=ASSMB;HOMSEQ=ATTCCATTCCATTCGA;MAPQ=60;MATEID=907286:2;MATENM=7;NM=2;NUMPARTS=2;SCTG=c_22_10706501_10731501_274C;SPAN=1412;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:29:70:76.1:76.1,0,99.2:29:0:-76.05:76.24\n22\t10728262\t907316:1\tC\tC[22:10729335[\t29\tPASS\tDISC_MAPQ=50;EVDNC=DSCRD;IMPRECISE;MAPQ=50;MATEID=907316:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=22:10728262(+)-22:10729335(-)__22_10706501_10731501D;SPAN=1073;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:17:96:29.3:29.3,0,210.8:0:17:-29.13:37.22\n22\t10728283\t907286:2\tA\t]22:10726871]A\t76\tPASS\tEVDNC=ASSMB;HOMSEQ=ATTCCATTCCATTCGA;MAPQ=60;MATEID=907286:1;MATENM=2;NM=7;NUMPARTS=2;SCTG=c_22_10706501_10731501_274C;SPAN=1412;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:29:70:76.1:76.1,0,99.2:29:0:-76.05:76.24\n22\t10729335\t907316:2\tT\t]22:10728262]T\t29\tPASS\tDISC_MAPQ=29;EVDNC=DSCRD;IMPRECISE;MAPQ=29;MATEID=907316:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=22:10728262(+)-22:10729335(-)__22_10706501_10731501D;SPAN=1073;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:17:96:29.3:29.3,0,210.8:0:17:-29.13:37.22\n22\t10739861\t907396:2\tC\t]10:125894203]C\t44\tPASS\tDISC_MAPQ=48;EVDNC=DSCRD;IMPRECISE;MAPQ=48;MATEID=907396:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=10:125894203(+)-22:10739861(-)__22_10731001_10756001D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:20:75:44.9:44.9,0,143.9:0:20:-44.94:47.83\n22\t10740444\t907451:1\tA\tA[22:10746352[\t32\tPASS\tDISC_MAPQ=15;EVDNC=DSCRD;IMPRECISE;MAPQ=15;MATEID=907451:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=22:10740444(+)-22:10746352(-)__22_10731001_10756001D;SPAN=5908;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:51:32:32,0,94.7:0:14:-31.88:33.69\n22\t10741540\t907397:2\tG\tG[10:125895950[\t25\tPASS\tDISC_MAPQ=49;EVDNC=DSCRD;IMPRECISE;MAPQ=49;MATEID=907397:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=10:125895950(-)-22:10741540(+)__22_10731001_10756001D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:16:12.2:25.4,0,12.2:0:9:-25.35:25.35\n22\t10746352\t907451:2\tG\t]22:10740444]G\t32\tPASS\tDISC_MAPQ=16;EVDNC=DSCRD;IMPRECISE;MAPQ=16;MATEID=907451:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=22:10740444(+)-22:10746352(-)__22_10731001_10756001D;SPAN=5908;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:51:32:32,0,94.7:0:14:-31.88:33.69\n22\t11031172\t907897:1\tG\tG[22:11032168[\t79\tPASS\tEVDNC=ASSMB;INSERTION=CCACAA;MAPQ=60;MATEID=907897:2;MATENM=3;NM=1;NUMPARTS=2;SCTG=c_22_11025001_11050001_283C;SPAN=996;SUBN=1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:30:71:79.1:79.1,0,98.9:30:0:-79.07:79.2\n22\t11032168\t907897:2\tA\t]22:11031172]A\t79\tPASS\tEVDNC=ASSMB;INSERTION=CCACAA;MAPQ=60;MATEID=907897:1;MATENM=1;NM=3;NUMPARTS=2;SCTG=c_22_11025001_11050001_283C;SPAN=996;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:30:71:79.1:79.1,0,98.9:30:0:-79.07:79.2\n22\t11317848\t949339:1\tT\t[Y:10134946[T\t66\tPASS\tDISC_MAPQ=255;EVDNC=ASDIS;HOMSEQ=GAAACTAAAAGATTTTTAATATATAAGGTTATGTCATCTGCAAACAGATA;MAPQ=45;MATEID=949339:2;MATENM=4;NM=2;NUMPARTS=2;SCTG=c_24_10118501_10143501_145C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:22:8:6:66,6,0:15:7:-66.02:66.02\n22\t11373695\t908592:2\tG\tG[20:29851924[\t61\tPASS\tDISC_MAPQ=51;EVDNC=ASDIS;HOMSEQ=GAGCAGTTTTGAAACACTCTTTTTGTAGAATCTGCAAGTGGATATTTGGAG;MAPQ=60;MATEID=908592:1;MATENM=6;NM=1;NUMPARTS=2;SCTG=c_22_11368001_11393001_16C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:22:41:41.3:61.1,0,41.3:9:14:-61.28:61.28\n22\t12698698\t910274:1\tA\tA[22:12699025[\t70\tPASS\tDISC_MAPQ=40;EVDNC=ASDIS;HOMSEQ=AAAAGAATAA;MAPQ=60;MATEID=910274:2;MATENM=9;NM=4;NUMPARTS=2;SCTG=c_22_12691001_12716001_689C;SPAN=327;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:29:91:70.4:70.4,0,156.2:14:15:-70.15:72.05\n22\t12699025\t910274:2\tA\t]22:12698698]A\t70\tPASS\tDISC_MAPQ=36;EVDNC=ASDIS;HOMSEQ=AAAAGAATAA;MAPQ=60;MATEID=910274:1;MATENM=4;NM=9;NUMPARTS=2;SCTG=c_22_12691001_12716001_689C;SPAN=327;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:29:91:70.4:70.4,0,156.2:14:15:-70.15:72.05\n22\t16034697\t910884:1\tA\t]22:16034865]A\t48\tPASS\tEVDNC=ASSMB;INSERTION=T;MAPQ=60;MATEID=910884:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_22_16023001_16048001_164C;SPAN=168;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:18:38:45.5:48.8,0,45.5:18:0:-48.74:48.74\n22\t16034865\t910884:2\tA\tA[22:16034697[\t48\tPASS\tEVDNC=ASSMB;INSERTION=T;MAPQ=60;MATEID=910884:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_22_16023001_16048001_164C;SPAN=168;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:18:38:45.5:48.8,0,45.5:18:0:-48.74:48.74\n22\t16080720\t911037:1\tT\tT[22:16084271[\t46\tPASS\tDISC_MAPQ=31;EVDNC=DSCRD;IMPRECISE;MAPQ=31;MATEID=911037:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=22:16080720(+)-22:16084271(-)__22_16072001_16097001D;SPAN=3551;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:15:14:4.2:46.2,4.2,0:0:15:-46.21:46.21\n22\t16084271\t911037:2\tG\t]22:16080720]G\t46\tPASS\tDISC_MAPQ=49;EVDNC=DSCRD;IMPRECISE;MAPQ=49;MATEID=911037:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=22:16080720(+)-22:16084271(-)__22_16072001_16097001D;SPAN=3551;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:15:14:4.2:46.2,4.2,0:0:15:-46.21:46.21\n22\t17289460\t912428:1\tC\tC[22:17298219[\t59\tPASS\tEVDNC=ASSMB;INSERTION=C;MAPQ=60;MATEID=912428:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_22_17297001_17322001_39C;SPAN=8759;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:20:10:5.4:59.4,5.4,0:20:0:-59.41:59.41\n22\t17298219\t912428:2\tC\t]22:17289460]C\t59\tPASS\tEVDNC=ASSMB;INSERTION=C;MAPQ=60;MATEID=912428:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_22_17297001_17322001_39C;SPAN=8759;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:20:10:5.4:59.4,5.4,0:20:0:-59.41:59.41\n22\t17801149\t912594:1\tT\tT[22:17801453[\t15\tPASS\tEVDNC=ASSMB;HOMSEQ=TCCTGAGTTTCCTTTTTCT;MAPQ=60;MATEID=912594:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_22_17787001_17812001_113C;SPAN=304;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:6:17:15.2:15.2,0,25.1:6:0:-15.03:15.24\n22\t17801453\t912594:2\tT\t]22:17801149]T\t15\tPASS\tEVDNC=ASSMB;HOMSEQ=TCCTGAGTTTCCTTTTTCT;MAPQ=60;MATEID=912594:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_22_17787001_17812001_113C;SPAN=304;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:6:17:15.2:15.2,0,25.1:6:0:-15.03:15.24\n22\t18036248\t912659:1\tT\t]22:18077776]T\t42\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;INSERTION=CCCCTCCATTAACATTAACAT;MAPQ=60;MATEID=912659:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_22_18056501_18081501_85C;SPAN=41528;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:14:13:3.9:42.9,3.9,0:10:9:-42.91:42.91\n22\t18077776\t912659:2\tA\tA[22:18036248[\t42\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;INSERTION=CCCCTCCATTAACATTAACAT;MAPQ=60;MATEID=912659:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_22_18056501_18081501_85C;SPAN=41528;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:14:13:3.9:42.9,3.9,0:10:9:-42.91:42.91\n22\t19584096\t913224:1\tC\tC[22:19585579[\t92\tPASS\tEVDNC=ASSMB;HOMSEQ=C;MAPQ=52;MATEID=913224:2;MATENM=3;NM=0;NUMPARTS=2;SCTG=c_22_19575501_19600501_112C;SPAN=1483;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:31:11:8.4:92.4,8.4,0:31:0:-92.42:92.42\n22\t19585579\t913224:2\tC\t]22:19584096]C\t92\tPASS\tEVDNC=ASSMB;HOMSEQ=C;MAPQ=60;MATEID=913224:1;MATENM=0;NM=3;NUMPARTS=2;SCTG=c_22_19575501_19600501_112C;SPAN=1483;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:31:11:8.4:92.4,8.4,0:31:0:-92.42:92.42\n22\t20075143\t913386:1\tG\t]22:20075626]G\t23\tPASS\tDISC_MAPQ=49;EVDNC=DSCRD;IMPRECISE;MAPQ=49;MATEID=913386:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=22:20075143(-)-22:20075626(+)__22_20065501_20090501D;SPAN=483;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:24:23:23,0,36.2:0:9:-22.96:23.15\n22\t20075626\t913386:2\tG\tG[22:20075143[\t23\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=913386:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=22:20075143(-)-22:20075626(+)__22_20065501_20090501D;SPAN=483;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:24:23:23,0,36.2:0:9:-22.96:23.15\n22\t22352809\t914312:1\tT\t]22:22375955]T\t28\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=914312:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=22:22352809(-)-22:22375955(+)__22_22368501_22393501D;SPAN=23146;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:18:14.9:28.1,0,14.9:0:10:-28.08:28.08\n22\t22375955\t914312:2\tA\tA[22:22352809[\t28\tPASS\tDISC_MAPQ=59;EVDNC=DSCRD;IMPRECISE;MAPQ=59;MATEID=914312:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=22:22352809(-)-22:22375955(+)__22_22368501_22393501D;SPAN=23146;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:18:14.9:28.1,0,14.9:0:10:-28.08:28.08\n22\t23429471\t914635:2\tC\t[7:1876939[C\t26\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=914635:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=7:1876939(-)-22:23429471(-)__22_23422001_23447001D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:23:26.6:26.6,0,29.9:0:10:-26.55:26.57\n22\t23558690\t914724:1\tA\tA[22:23561043[\t24\tPASS\tDISC_MAPQ=53;EVDNC=DSCRD;IMPRECISE;MAPQ=53;MATEID=914724:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=22:23558690(+)-22:23561043(-)__22_23544501_23569501D;SPAN=2353;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:20:24.2:24.2,0,24.2:0:9:-24.09:24.09\n22\t23561043\t914724:2\tA\t]22:23558690]A\t24\tPASS\tDISC_MAPQ=21;EVDNC=DSCRD;IMPRECISE;MAPQ=21;MATEID=914724:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=22:23558690(+)-22:23561043(-)__22_23544501_23569501D;SPAN=2353;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:20:24.2:24.2,0,24.2:0:9:-24.09:24.09\n22\t23683431\t914791:1\tG\tG[22:23685352[\t37\tPASS\tEVDNC=ASSMB;HOMSEQ=G;MAPQ=60;MATEID=914791:2;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_22_23667001_23692001_69C;SPAN=1921;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:20:11:37.4,0,11:13:0:-37.93:37.93\n22\t23685352\t914791:2\tG\t]22:23683431]G\t37\tPASS\tEVDNC=ASSMB;HOMSEQ=G;MAPQ=60;MATEID=914791:1;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_22_23667001_23692001_69C;SPAN=1921;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:20:11:37.4,0,11:13:0:-37.93:37.93\n22\t23853676\t914841:2\tT\t[2:47582850[T\t47\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TA;MAPQ=60;MATEID=914841:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_22_23838501_23863501_79C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:16:20:1.1:47.3,0,1.1:15:2:-49.48:49.48\n22\t23853754\t914857:1\tA\tA[22:23856319[\t61\tPASS\tEVDNC=ASSMB;HOMSEQ=GAAAAAAA;MAPQ=60;MATEID=914857:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_22_23838501_23863501_51C;SPAN=2565;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:21:29:11.6:61.1,0,11.6:21:0:-63.06:63.06\n22\t23856319\t914857:2\tG\t]22:23853754]G\t61\tPASS\tEVDNC=ASSMB;HOMSEQ=GAAAAAAA;MAPQ=60;MATEID=914857:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_22_23838501_23863501_51C;SPAN=2565;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:21:29:11.6:61.1,0,11.6:21:0:-63.06:63.06\n22\t23931957\t914955:1\tA\tA[22:23969109[\t52\tPASS\tEVDNC=ASSMB;HOMSEQ=CA;MAPQ=60;MATEID=914955:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_22_23961001_23986001_4C;SPAN=37152;SUBN=2;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:18:12:4.8:52.8,4.8,0:18:0:-52.81:52.81\n22\t23969109\t914955:2\tC\t]22:23931957]C\t52\tPASS\tEVDNC=ASSMB;HOMSEQ=CA;MAPQ=60;MATEID=914955:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_22_23961001_23986001_4C;SPAN=37152;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:18:12:4.8:52.8,4.8,0:18:0:-52.81:52.81\n22\t25006973\t915214:1\tC\tC[22:25007371[\t28\tPASS\tEVDNC=ASSMB;INSERTION=AGGTTTTCGGGATT;MAPQ=60;MATEID=915214:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_22_24990001_25015001_32C;SPAN=398;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:18:14.9:28.1,0,14.9:10:0:-28.08:28.08\n22\t25007371\t915214:2\tA\t]22:25006973]A\t28\tPASS\tEVDNC=ASSMB;INSERTION=AGGTTTTCGGGATT;MAPQ=60;MATEID=915214:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_22_24990001_25015001_32C;SPAN=398;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:18:14.9:28.1,0,14.9:10:0:-28.08:28.08\n22\t25178400\t915247:2\tT\t]20:63640433]T\t33\tPASS\tDISC_MAPQ=50;EVDNC=DSCRD;IMPRECISE;MAPQ=50;MATEID=915247:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=20:63640433(+)-22:25178400(-)__22_25161501_25186501D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:11:10:3:33,3,0:0:11:-33.01:33.01\n22\t26772113\t915762:1\tT\tT[22:26773830[\t21\tPASS\tEVDNC=ASSMB;HOMSEQ=CTTAACCTCT;MAPQ=60;MATEID=915762:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_22_26754001_26779001_71C;SPAN=1717;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:29:21.5:21.5,0,51.2:9:0:-21.56:22.23\n22\t26773830\t915762:2\tC\t]22:26772113]C\t21\tPASS\tEVDNC=ASSMB;HOMSEQ=CTTAACCTCT;MAPQ=60;MATEID=915762:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_22_26754001_26779001_71C;SPAN=1717;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:29:21.5:21.5,0,51.2:9:0:-21.56:22.23\n22\t28669436\t916262:2\tT\tT[3:176189690[\t6\tPASS\tEVDNC=ASSMB;HOMSEQ=C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1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:16:10:4.2:46.2,4.2,0:11:9:-46.21:46.21\n22\t32179925\t917274:2\tG\t]9:98715302]G\t62\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;INSERTION=GCATGGTGAGTCT;MAPQ=60;MATEID=917274:1;MATENM=35;NM=2;NUMPARTS=2;SCTG=c_22_32168501_32193501_27C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:21:10:5.7:62.7,5.7,0:19:7:-62.72:62.72\n22\t32899786\t917609:1\tC\tC[22:32900091[\t52\tPASS\tEVDNC=ASSMB;HOMSEQ=AAAACAAGGAAGTC;MAPQ=60;MATEID=917609:2;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_22_32879001_32904001_118C;SPAN=305;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:17:18:4.8:52.8,4.8,0:17:0:-52.81:52.81\n22\t32900091\t917609:2\tA\t]22:32899786]A\t52\tPASS\tEVDNC=ASSMB;HOMSEQ=AAAACAAGGAAGTC;MAPQ=60;MATEID=917609:1;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_22_32879001_32904001_118C;SPAN=305;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:17:18:4.8:52.8,4.8,0:17:0:-52.81:52.81\n22\t34322060\t918200:1\tA\t[22:34474116[A\t56\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TCT;MAPQ=60;MATEID=918200:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_22_34471501_34496501_71C;SPAN=152056;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:18:19:5.1:56.1,5.1,0:16:7:-56.11:56.11\n22\t34474116\t918200:2\tT\t[22:34322060[T\t56\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TCT;MAPQ=60;MATEID=918200:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_22_34471501_34496501_71C;SPAN=152056;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:18:19:5.1:56.1,5.1,0:16:7:-56.11:56.11\n22\t34476818\t918199:2\tT\tT[2:240614048[\t25\tPASS\tEVDNC=ASSMB;HOMSEQ=CT;MAPQ=60;MATEID=918199:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_22_34471501_34496501_39C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:17:15.2:25.1,0,15.2:9:0:-24.99:24.99\n22\t34664447\t918283:1\tA\tA[22:34665282[\t44\tPASS\tEVDNC=ASSMB;HOMSEQ=AA;MAPQ=60;MATEID=918283:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_22_34643001_34668001_90C;SPAN=835;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:16:28:25.1:44.9,0,25.1:16:0:-45.23:45.23\n22\t34665282\t918283:2\tA\t]22:34664447]A\t44\tPASS\tEVDNC=ASSMB;HOMSEQ=AA;MAPQ=60;MATEID=918283:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_22_34643001_34668001_90C;SPAN=835;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:16:28:25.1:44.9,0,25.1:16:0:-45.23:45.23\n22\t35063008\t918417:1\tG\tG[22:35063429[\t52\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;INSERTION=AATGGGGGC;MAPQ=60;MATEID=918417:2;MATENM=0;NM=5;NUMPARTS=2;SCTG=c_22_35059501_35084501_25C;SPAN=421;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:16:18:4.8:52.8,4.8,0:9:11:-51.41:51.41\n22\t35063429\t918417:2\tA\t]22:35063008]A\t52\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;INSERTION=AATGGGGGC;MAPQ=60;MATEID=918417:1;MATENM=5;NM=0;NUMPARTS=2;SCTG=c_22_35059501_35084501_25C;SPAN=421;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:16:18:4.8:52.8,4.8,0:9:11:-51.41:51.41\n22\t35249223\t918484:1\tT\tT[22:35250146[\t46\tPASS\tDISC_MAPQ=58;EVDNC=DSCRD;IMPRECISE;MAPQ=58;MATEID=918484:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=22:35249223(+)-22:35250146(-)__22_35231001_35256001D;SPAN=923;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:16:3:4.2:46.2,4.2,0:0:16:-46.21:46.21\n22\t35250146\t918484:2\tC\t]22:35249223]C\t46\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=918484:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=22:35249223(+)-22:35250146(-)__22_35231001_35256001D;SPAN=923;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:16:3:4.2:46.2,4.2,0:0:16:-46.21:46.21\n22\t36533059\t918828:1\tT\t[22:36538235[T\t34\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TA;MAPQ=60;MATEID=918828:2;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_22_36529501_36554501_31C;SPAN=5176;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:20:14.3:34.1,0,14.3:8:5:-34.32:34.32\n22\t36538235\t918828:2\tT\t[22:36533059[T\t34\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=TA;MAPQ=60;MATEID=918828:1;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_22_36529501_36554501_31C;SPAN=5176;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:20:14.3:34.1,0,14.3:8:5:-34.32:34.32\n22\t36747132\t918917:1\tT\tT[22:36751852[\t23\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AGTAGCT;MAPQ=60;MATEID=918917:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_22_36750001_36775001_21C;SPAN=4720;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:8:4:2.1:23.1,2.1,0:5:6:-23.11:23.11\n22\t36751852\t918917:2\tA\t]22:36747132]A\t23\tPASS\tDISC_MAPQ=53;EVDNC=ASDIS;HOMSEQ=AGTAGCT;MAPQ=60;MATEID=918917:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_22_36750001_36775001_21C;SPAN=4720;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:8:4:2.1:23.1,2.1,0:5:6:-23.11:23.11\n22\t37015985\t919060:1\tC\t]22:37190824]C\t42\tPASS\tEVDNC=ASSMB;HOMSEQ=CCA;MAPQ=60;MATEID=919060:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_22_37166501_37191501_89C;SPAN=174839;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:14:12:3.9:42.9,3.9,0:14:0:-42.91:42.91\n22\t37190824\t919060:2\tA\tA[22:37015985[\t42\tPASS\tEVDNC=ASSMB;HOMSEQ=CCA;MAPQ=60;MATEID=919060:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_22_37166501_37191501_89C;SPAN=174839;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:14:12:3.9:42.9,3.9,0:14:0:-42.91:42.91\n22\t42705458\t920298:1\tC\tC[22:42706193[\t42\tPASS\tDISC_MAPQ=55;EVDNC=ASDIS;HOMSEQ=AAAATACAAAAAATTAGC;MAPQ=60;MATEID=920298:2;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_22_42703501_42728501_40C;SPAN=735;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:14:4:3.9:42.9,3.9,0:2:13:-42.91:42.91\n22\t42706193\t920298:2\tA\t]22:42705458]A\t42\tPASS\tDISC_MAPQ=51;EVDNC=ASDIS;HOMSEQ=AAAATACAAAAAATTAGC;MAPQ=60;MATEID=920298:1;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_22_42703501_42728501_40C;SPAN=735;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:14:4:3.9:42.9,3.9,0:2:13:-42.91:42.91\n22\t44904504\t920968:1\tG\tG[22:44904876[\t38\tPASS\tEVDNC=ASSMB;INSERTION=GGTATAAAATACTGAGTTGGCAGTG;MAPQ=60;MATEID=920968:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_22_44884001_44909001_62C;SPAN=372;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:17:2:38.3,0,2:13:0:-39.65:39.65\n22\t44904876\t920968:2\tA\t]22:44904504]A\t38\tPASS\tEVDNC=ASSMB;INSERTION=GGTATAAAATACTGAGTTGGCAGTG;MAPQ=60;MATEID=920968:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_22_44884001_44909001_62C;SPAN=372;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:17:2:38.3,0,2:13:0:-39.65:39.65\n22\t45349456\t921146:1\tC\tC[22:45350365[\t33\tPASS\tEVDNC=ASSMB;HOMSEQ=CCTCCCGGGTTCAAGTGATTCTCCTGCCTCAGC;MAPQ=60;MATEID=921146:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_22_45325001_45350001_48C;SPAN=909;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:11:3:3:33,3,0:11:0:-33.01:33.01\n22\t45349559\t921149:1\tC\t]22:45350566]C\t56\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=CTCCTGACCTTGTGATCTGCCTGCCTCGGCCTCCCATAGTGCTGGGATTACAGGCGTGAGCCACCG;MAPQ=60;MATEID=921149:2;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_22_45349501_45374501_67C;SPAN=1007;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:19:13:5.1:56.1,5.1,0:14:8:-56.11:56.11\n22\t45350365\t921146:2\tC\t]22:45349456]C\t33\tPASS\tEVDNC=ASSMB;HOMSEQ=CCTCCCGGGTTCAAGTGATTCTCCTGCCTCAGC;MAPQ=60;MATEID=921146:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_22_45325001_45350001_48C;SPAN=909;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:11:3:3:33,3,0:11:0:-33.01:33.01\n22\t45350566\t921149:2\tG\tG[22:45349559[\t56\tPASS\tDISC_MAPQ=34;EVDNC=ASDIS;HOMSEQ=CTCCTGACCTTGTGATCTGCCTGCCTCGGCCTCCCATAGTGCTGGGATTACAGGCGTGAGCCACCG;MAPQ=60;MATEID=921149:1;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_22_45349501_45374501_67C;SPAN=1007;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:19:13:5.1:56.1,5.1,0:14:8:-56.11:56.11\n22\t45479153\t921203:1\tT\tT[22:45479470[\t22\tPASS\tEVDNC=ASSMB;HOMSEQ=TATTATAAATTTTT;MAPQ=60;MATEID=921203:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_22_45472001_45497001_108C;SPAN=317;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:26:22.4:22.4,0,42.2:9:0:-22.4:22.76\n22\t45479470\t921203:2\tT\t]22:45479153]T\t22\tPASS\tEVDNC=ASSMB;HOMSEQ=TATTATAAATTTTT;MAPQ=60;MATEID=921203:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_22_45472001_45497001_108C;SPAN=317;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:26:22.4:22.4,0,42.2:9:0:-22.4:22.76\n22\t45595928\t895070:2\tG\tG[21:10489827[\t35\tPASS\tDISC_MAPQ=54;EVDNC=DSCRD;IMPRECISE;MAPQ=54;MATEID=895070:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=21:10489827(-)-22:45595928(+)__21_10486001_10511001D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:26:29:35.6,0,29:0:13:-35.63:35.63\n22\t46026671\t921353:1\tC\t]22:46027582]C\t15\tPASS\tEVDNC=ASSMB;HOMSEQ=C;MAPQ=60;MATEID=921353:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_22_46011001_46036001_9C;SPAN=911;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:7:28:15.2:15.2,0,54.8:7:0:-15.24:16.51\n22\t46027582\t921353:2\tC\tC[22:46026671[\t15\tPASS\tEVDNC=ASSMB;HOMSEQ=C;MAPQ=60;MATEID=921353:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_22_46011001_46036001_9C;SPAN=911;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:7:28:15.2:15.2,0,54.8:7:0:-15.24:16.51\n22\t47300719\t921635:1\tG\tG[22:47301110[\t42\tPASS\tEVDNC=ASSMB;HOMSEQ=AGGAAG;MAPQ=60;MATEID=921635:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_22_47285001_47310001_39C;SPAN=391;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:14:14:3.9:42.9,3.9,0:14:0:-42.91:42.91\n22\t47301110\t921635:2\tA\t]22:47300719]A\t42\tPASS\tEVDNC=ASSMB;HOMSEQ=AGGAAG;MAPQ=60;MATEID=921635:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_22_47285001_47310001_39C;SPAN=391;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:14:14:3.9:42.9,3.9,0:14:0:-42.91:42.91\n22\t47386239\t921681:1\tT\tT[22:47386455[\t19\tPASS\tEVDNC=ASSMB;INSERTION=TGTAG;MAPQ=60;MATEID=921681:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_22_47383001_47408001_54C;SPAN=216;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:7:14:15.8:19.1,0,15.8:7:0:-19.19:19.19\n22\t47386455\t921681:2\tC\t]22:47386239]C\t19\tPASS\tEVDNC=ASSMB;INSERTION=TGTAG;MAPQ=60;MATEID=921681:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_22_47383001_47408001_54C;SPAN=216;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:7:14:15.8:19.1,0,15.8:7:0:-19.19:19.19\n22\t49029656\t922294:2\tT\tT[2:85486995[\t26\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;INSERTION=G;MAPQ=60;MATEID=922294:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_22_49024501_49049501_90C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:9:7:2.4:26.4,2.4,0:7:4:-26.41:26.41\n22\t49205551\t922378:1\tA\t]22:49205666]A\t17\tPASS\tEVDNC=ASSMB;HOMSEQ=ACCTCCAT;MAPQ=60;MATEID=922378:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_22_49196001_49221001_12C;SPAN=115;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:7:20:17.6:17.6,0,30.8:7:0:-17.49:17.74\n22\t49205666\t922378:2\tT\tT[22:49205551[\t17\tPASS\tEVDNC=ASSMB;HOMSEQ=ACCTCCAT;MAPQ=60;MATEID=922378:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_22_49196001_49221001_12C;SPAN=115;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:7:20:17.6:17.6,0,30.8:7:0:-17.49:17.74\n22\t49226612\t922392:1\tC\t]22:49228522]C\t21\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=922392:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=22:49226612(-)-22:49228522(+)__22_49220501_49245501D;SPAN=1910;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:18:21.5:21.5,0,21.5:0:8:-21.35:21.36\n22\t49228522\t922392:2\tG\tG[22:49226612[\t21\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=922392:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=22:49226612(-)-22:49228522(+)__22_49220501_49245501D;SPAN=1910;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:18:21.5:21.5,0,21.5:0:8:-21.35:21.36\nX\t522245\t923061:1\tT\t]X:522610]T\t5\tPASS\tDISC_MAPQ=11;EVDNC=TSI_L;HOMSEQ=TTTCTTTCTTTCTCTTTCTTTCTTTT;MAPQ=53;MATEID=923061:2;MATENM=52;NM=0;NUMPARTS=4;REPSEQ=TTCTTTCTTTCT;SCTG=c_23_514501_539501_70C;SPAN=365;SUBN=2;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:28:5:5,0,16:5:5:-4.711:5.41\nX\t522610\t923061:2\tT\tT[X:522245[\t5\tPASS\tDISC_MAPQ=14;EVDNC=TSI_L;HOMSEQ=TTTCTTTCTTTCTCTTTCTTTCTTTT;MAPQ=36;MATEID=923061:1;MATENM=0;NM=52;NUMPARTS=4;REPSEQ=TTCTTTCTTTCT;SCTG=c_23_514501_539501_70C;SPAN=365;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:9:28:5:5,0,16:5:5:-4.711:5.41\nX\t700223\t923242:1\tC\tC[X:700508[\t6\tPASS\tEVDNC=ASSMB;HOMSEQ=GGCCTCCCAAAGTGCTGGGATGACAGGC;MAPQ=60;MATEID=923242:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_23_686001_711001_13C;SPAN=285;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:4:24:6.5:6.5,0,52.7:4:0:-6.458:8.642\nX\t700508\t923242:2\tG\t]X:700223]G\t6\tPASS\tEVDNC=ASSMB;HOMSEQ=GGCCTCCCAAAGTGCTGGGATGACAGGC;MAPQ=60;MATEID=923242:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_23_686001_711001_13C;SPAN=285;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:4:24:6.5:6.5,0,52.7:4:0:-6.458:8.642\nX\t1083702\t923494:1\tC\tC[X:1084699[\t52\tPASS\tDISC_MAPQ=57;EVDNC=DSCRD;IMPRECISE;MAPQ=57;MATEID=923494:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=23:1083702(+)-23:1084699(-)__23_1078001_1103001D;SPAN=997;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:18:2:4.8:52.8,4.8,0:0:18:-52.81:52.81\nX\t1084699\t923494:2\tA\t]X:1083702]A\t52\tPASS\tDISC_MAPQ=57;EVDNC=DSCRD;IMPRECISE;MAPQ=57;MATEID=923494:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=23:1083702(+)-23:1084699(-)__23_1078001_1103001D;SPAN=997;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:18:2:4.8:52.8,4.8,0:0:18:-52.81:52.81\nX\t2277183\t924095:1\tG\tG[X:2282290[\t26\tPASS\tDISC_MAPQ=42;EVDNC=DSCRD;IMPRECISE;MAPQ=42;MATEID=924095:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=23:2277183(+)-23:2282290(-)__23_2278501_2303501D;SPAN=5107;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:9:3:2.4:26.4,2.4,0:0:9:-26.41:26.41\nX\t2282290\t924095:2\tA\t]X:2277183]A\t26\tPASS\tDISC_MAPQ=53;EVDNC=DSCRD;IMPRECISE;MAPQ=53;MATEID=924095:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=23:2277183(+)-23:2282290(-)__23_2278501_2303501D;SPAN=5107;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:9:3:2.4:26.4,2.4,0:0:9:-26.41:26.41\nX\t5047637\t924954:1\tT\tT[Un_KN707734v1_decoy:1[\t46\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=924954:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_23_5047001_5072001_7C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:15:4:4.2:46.2,4.2,0:15:0:-46.21:46.21\nX\t5137385\t924998:1\tG\tG[X:5139458[\t46\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=924998:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=23:5137385(+)-23:5139458(-)__23_5120501_5145501D;SPAN=2073;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:15:3:4.2:46.2,4.2,0:0:15:-46.21:46.21\nX\t5139458\t924998:2\tA\t]X:5137385]A\t46\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=924998:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=23:5137385(+)-23:5139458(-)__23_5120501_5145501D;SPAN=2073;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:15:3:4.2:46.2,4.2,0:0:15:-46.21:46.21\nX\t5811084\t925207:1\tG\t[X:5812566[G\t60\tPASS\tEVDNC=ASSMB;HOMSEQ=GTGGA;MAPQ=60;MATEID=925207:2;MATENM=0;NM=7;NUMPARTS=2;SCTG=c_23_5806501_5831501_11C;SPAN=1482;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:21:32:17.6:60.5,0,17.6:21:0:-61.42:61.42\nX\t5811085\t925208:1\tT\tT]X:5812751]\t79\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=T;MAPQ=60;MATEID=925208:2;MATENM=0;NM=14;NUMPARTS=2;SCTG=c_23_5806501_5831501_4C;SPAN=1666;SUBN=1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:24:26:7.2:79.2,7.2,0:20:5:-78.56:78.56\nX\t5812566\t925207:2\tT\t[X:5811084[T\t60\tPASS\tEVDNC=ASSMB;HOMSEQ=GTGGA;MAPQ=60;MATEID=925207:1;MATENM=7;NM=0;NUMPARTS=2;SCTG=c_23_5806501_5831501_11C;SPAN=1482;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:21:32:17.6:60.5,0,17.6:21:0:-61.42:61.42\nX\t5812751\t925208:2\tA\tA]X:5811085]\t79\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=T;MAPQ=60;MATEID=925208:1;MATENM=14;NM=0;NUMPARTS=2;SCTG=c_23_5806501_5831501_4C;SPAN=1666;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:24:26:7.2:79.2,7.2,0:20:5:-78.56:78.56\nX\t7232716\t925458:1\tA\t]X:7238469]A\t23\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=925458:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_23_7227501_725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:1;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_23_46819501_46844501_18C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:10:10:2.7:29.7,2.7,0:3:7:-29.71:29.71\nX\t48232327\t931311:1\tT\tT[X:48233548[\t18\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=931311:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=23:48232327(+)-23:48233548(-)__23_48216001_48241001D;SPAN=1221;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:51:18.8:18.8,0,107.9:0:10:-18.67:22.39\nX\t48233548\t931311:2\tC\t]X:48232327]C\t18\tPASS\tDISC_MAPQ=43;EVDNC=DSCRD;IMPRECISE;MAPQ=43;MATEID=931311:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=23:48232327(+)-23:48233548(-)__23_48216001_48241001D;SPAN=1221;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:51:18.8:18.8,0,107.9:0:10:-18.67:22.39\nX\t49017568\t931447:1\tG\t]X:49018696]G\t52\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=GGGATTACAGGCGTGAGCCAC;MAPQ=60;MATEID=931447:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_23_49000001_49025001_18C;SPAN=1128;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:17:18:4.8:52.8,4.8,0:12:8:-52.81:52.81\nX\t49018696\t931447:2\tC\tC[X:49017568[\t52\tPASS\tDISC_MAPQ=58;EVDNC=ASDIS;HOMSEQ=GGGATTACAGGCGTGAGCCAC;MAPQ=60;MATEID=931447:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_23_49000001_49025001_18C;SPAN=1128;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:17:18:4.8:52.8,4.8,0:12:8:-52.81:52.81\nX\t49069209\t931464:1\tT\t]X:49069329]T\t41\tPASS\tEVDNC=ASSMB;HOMSEQ=TGCCT;MAPQ=60;MATEID=931464:2;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_23_49049001_49074001_17C;SPAN=120;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:15:27:25.4:41.9,0,25.4:15:0:-42.12:42.12\nX\t49069329\t931464:2\tT\tT[X:49069209[\t41\tPASS\tEVDNC=ASSMB;HOMSEQ=TGCCT;MAPQ=60;MATEID=931464:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_23_49049001_49074001_17C;SPAN=120;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:15:27:25.4:41.9,0,25.4:15:0:-42.12:42.12\nX\t49142499\t807511:2\tA\tA]17:52598606]\t29\tPASS\tDISC_MAPQ=23;EVDNC=DSCRD;IMPRECISE;MAPQ=23;MATEID=807511:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=17:52598606(+)-23:49142499(+)__17_52577001_52602001D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:25:29.3:29.3,0,32.6:0:11:-29.28:29.3\nX\t52857692\t988228:1\tT\t]X:55652526]T\t39\tPASS\tDISC_MAPQ=255;EVDNC=TSI_L;HOMSEQ=ACTTTATAA;INSERTION=TGTAAAGCTGTAAAATTTTAAGTGGGAGCATCATAAGTCAGGGGCATCTGTATTCTCTCTGTTGGACTTTGGTATCCAGGTTACACTATCTTCATGAAATGAATTGGGATATAAGTCCTCTTTCTATTCTCTGAAACTGAAATTTCTGCAAGACTGAATAACTTGGGGATAGCCTTTAC;MAPQ=60;MATEID=988228:2;MATENM=0;NM=4;NUMPARTS=7;REPSEQ=AA;SCTG=c_554_1_2235_0C;SPAN=2794834;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:13:0:3.6:39.6,3.6,0:13:0:-39.61:39.61\nX\t54890705\t1003600:1\tG\tG[Un_JTFH01001605v1_decoy:1[\t46\tPASS\tDISC_MAPQ=255;EVDNC=TSI_L;MAPQ=60;MATEID=1003600:2;MATENM=0;NM=0;NUMPARTS=3;SCTG=c_2448_1_1195_1C;SPAN=-1;SUBN=1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:16:5:4.2:46.2,4.2,0:16:0:-46.21:46.21\nX\t55652526\t988228:2\tT\tT[X:52857692[\t39\tPASS\tDISC_MAPQ=255;EVDNC=TSI_L;HOMSEQ=ACTTTATAA;INSERTION=TGTAAAGCTGTAAAATTTTAAGTGGGAGCATCATAAGTCAGGGGCATCTGTATTCTCTCTGTTGGACTTTGGTATCCAGGTTACACTATCTTCATGAAATGAATTGGGATATAAGTCCTCTTTCTATTCTCTGAAACTGAAATTTCTGCAAGACTGAATAACTTGGGGATAGCCTTTAC;MAPQ=60;MATEID=988228:1;MATENM=4;NM=0;NUMPARTS=7;REPSEQ=AA;SCTG=c_554_1_2235_0C;SPAN=2794834;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:13:0:3.6:39.6,3.6,0:13:0:-39.61:39.61\nX\t55676039\t932475:1\tT\tT[X:55683405[\t23\tPASS\tDISC_MAPQ=30;EVDNC=DSCRD;IMPRECISE;MAPQ=30;MATEID=932475:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=23:55676039(+)-23:55683405(-)__23_55664001_55689001D;SPAN=7366;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:8:3:2.1:23.1,2.1,0:0:8:-23.11:23.11\nX\t55683405\t932475:2\tT\t]X:55676039]T\t23\tPASS\tDISC_MAPQ=28;EVDNC=DSCRD;IMPRECISE;MAPQ=28;MATEID=932475:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=23:55676039(+)-23:55683405(-)__23_55664001_55689001D;SPAN=7366;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:8:3:2.1:23.1,2.1,0:0:8:-23.11:23.11\nX\t62600756\t933238:1\tA\t]X:62601314]A\t47\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=ACATAAAAACTAGACAGAAGCCTTCTCAGAAACTACTTTGTGATGT;MAPQ=60;MATEID=933238:2;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_23_62597501_62622501_43C;SPAN=558;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:17:30:27.8:47.6,0,27.8:14:7:-47.96:47.96\nX\t62601314\t933238:2\tT\tT[X:62600756[\t47\tPASS\tDISC_MAPQ=50;EVDNC=ASDIS;HOMSEQ=ACATAAAAACTAGACAGAAGCCTTCTCAGAAACTACTTTGTGATGT;MAPQ=60;MATEID=933238:1;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_23_62597501_62622501_43C;SPAN=558;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:17:30:27.8:47.6,0,27.8:14:7:-47.96:47.96\nX\t64507376\t933494:2\tA\tA[14:52475035[\t42\tPASS\tDISC_MAPQ=28;EVDNC=DSCRD;IMPRECISE;MAPQ=13;MATEID=933494:1;MATENM=3;NM=0;NUMPARTS=2;SCTG=c_23_64484001_64509001_20C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:14:4:3.9:42.9,3.9,0:10:9:-42.91:42.91\nX\t64512169\t933497:2\tT\t[2:4274462[T\t36\tPASS\tDISC_MAPQ=48;EVDNC=ASDIS;HOMSEQ=CA;MAPQ=16;MATEID=933497:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_23_64508501_64533501_2C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:12:5:3.3:36.3,3.3,0:7:5:-36.31:36.31\nX\t68328802\t934007:2\tC\tC[17:45488644[\t52\tPASS\tDISC_MAPQ=57;EVDNC=DSCRD;IMPRECISE;MAPQ=57;MATEID=934007:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=17:45488644(-)-23:68328802(+)__23_68306001_68331001D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:18:16:4.8:52.8,4.8,0:0:18:-52.81:52.81\nX\t70909425\t934404:1\tA\t[X:70920177[A\t52\tPASS\tDISC_MAPQ=59;EVDNC=TSI_L;HOMSEQ=CCATGTT;MAPQ=60;MATEID=934404:2;MATENM=2;NM=0;NUMPARTS=3;REPSEQ=TT;SCTG=c_23_70903001_70928001_4C;SPAN=10752;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:18:13:4.8:52.8,4.8,0:14:8:-52.81:52.81\nX\t70909570\t934405:1\tT\tT]X:70917407]\t28\tPASS\tEVDNC=ASSMB;HOMSEQ=AT;MAPQ=60;MATEID=934405:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_23_70903001_70928001_3C;SPAN=7837;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:16:8.9:28.7,0,8.9:10:0:-28.89:28.89\nX\t70917407\t934405:2\tT\tT]X:70909570]\t28\tPASS\tEVDNC=ASSMB;HOMSEQ=AT;MAPQ=60;MATEID=934405:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_23_70903001_70928001_3C;SPAN=7837;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:16:8.9:28.7,0,8.9:10:0:-28.89:28.89\nX\t70920177\t934404:2\tC\t[X:70909425[C\t52\tPASS\tDISC_MAPQ=60;EVDNC=TSI_L;HOMSEQ=CCATGTT;MAPQ=60;MATEID=934404:1;MATENM=0;NM=2;NUMPARTS=3;REPSEQ=TT;SCTG=c_23_70903001_70928001_4C;SPAN=10752;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:18:13:4.8:52.8,4.8,0:14:8:-52.81:52.81\nX\t76034035\t935120:1\tT\tT[X:76034332[\t99\tPASS\tDISC_MAPQ=59;EVDNC=ASDIS;HOMSEQ=AAATGTCTTCTTTT;MAPQ=48;MATEID=935120:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_23_76023501_76048501_4C;SPAN=297;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:43:5:12:132,12,0:38:6:-132:132\nX\t76034332\t935120:2\tA\t]X:76034035]A\t99\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=AAATGTCTTCTTTT;MAPQ=60;MATEID=935120:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_23_76023501_76048501_4C;SPAN=297;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:43:5:12:132,12,0:38:6:-132:132\nX\t77865920\t935477:1\tC\tC[X:77868370[\t56\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=CTCACGCCTGTAATCCCAGCACTTTGGGAGGC;MAPQ=60;MATEID=935477:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_23_77861001_77886001_29C;SPAN=2450;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:19:5:5.1:56.1,5.1,0:11:12:-56.11:56.11\nX\t77868370\t935477:2\tC\t]X:77865920]C\t56\tPASS\tDISC_MAPQ=59;EVDNC=ASDIS;HOMSEQ=CTCACGCCTGTAATCCCAGCACTTTGGGAGGC;MAPQ=60;MATEID=935477:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_23_77861001_77886001_29C;SPAN=2450;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:19:5:5.1:56.1,5.1,0:11:12:-56.11:56.11\nX\t79412522\t935715:1\tC\tC[X:79415029[\t41\tPASS\tEVDNC=ASSMB;HOMSEQ=C;MAPQ=60;MATEID=935715:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_23_79404501_79429501_21C;SPAN=2507;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:19:4.7:41,0,4.7:14:0:-42.24:42.24\nX\t79415029\t935715:2\tC\t]X:79412522]C\t41\tPASS\tEVDNC=ASSMB;HOMSEQ=C;MAPQ=60;MATEID=935715:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_23_79404501_79429501_21C;SPAN=2507;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:19:4.7:41,0,4.7:14:0:-42.24:42.24\nX\t81554533\t936101:1\tA\t]X:81557077]A\t29\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=936101:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_23_81536001_81561001_9C;SPAN=2544;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:23:26.6:29.9,0,26.6:11:0:-29.85:29.85\nX\t81557077\t936101:2\tC\tC[X:81554533[\t29\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=936101:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_23_81536001_81561001_9C;SPAN=2544;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:23:26.6:29.9,0,26.6:11:0:-29.85:29.85\nX\t84849013\t936673:1\tA\t[X:84880060[A\t26\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=936673:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=23:84849013(-)-23:84880060(-)__23_84843501_84868501D;SPAN=31047;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:9:8:2.4:26.4,2.4,0:0:9:-26.41:26.41\nX\t84880060\t936673:2\tC\t[X:84849013[C\t26\tPASS\tDISC_MAPQ=53;EVDNC=DSCRD;IMPRECISE;MAPQ=53;MATEID=936673:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=23:84849013(-)-23:84880060(-)__23_84843501_84868501D;SPAN=31047;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:9:8:2.4:26.4,2.4,0:0:9:-26.41:26.41\nX\t86350284\t937029:1\tG\tG[X:86354860[\t66\tPASS\tDISC_MAPQ=53;EVDNC=DSCRD;IMPRECISE;MAPQ=53;MATEID=937029:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=23:86350284(+)-23:86354860(-)__23_86338001_86363001D;SPAN=4576;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:22:6:6:66,6,0:0:22:-66.02:66.02\nX\t86354860\t937029:2\tC\t]X:86350284]C\t66\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=937029:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=23:86350284(+)-23:86354860(-)__23_86338001_86363001D;SPAN=4576;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:22:6:6:66,6,0:0:22:-66.02:66.02\nX\t87031756\t937199:1\tG\tG[X:87032222[\t39\tPASS\tEVDNC=ASSMB;INSERTION=GAGTTTTGTTTTAAG;MAPQ=60;MATEID=937199:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_23_87024001_87049001_7C;SPAN=466;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:13:10:3.6:39.6,3.6,0:13:0:-39.61:39.61\nX\t87032222\t937199:2\tT\t]X:87031756]T\t39\tPASS\tEVDNC=ASSMB;INSERTION=GAGTTTTGTTTTAAG;MAPQ=60;MATEID=937199:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_23_87024001_87049001_7C;SPAN=466;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:13:10:3.6:39.6,3.6,0:13:0:-39.61:39.61\nX\t89206255\t937778:1\tT\tT[X:89207312[\t3\tPASS\tDISC_MAPQ=7;EVDNC=ASDIS;HOMSEQ=GTGTCGTAAAATACCGACGTATCTGTTATAATCGTCGGTGTCGTAAAATACCGACGTATAT;MAPQ=16;MATEID=937778:2;MATENM=4;NM=9;NUMPARTS=2;SCTG=c_23_89204501_89229501_6C;SPAN=1057;SUBN=1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:106:3.5:3.5,0,260.9:6:4:-3.214:18.96\nX\t89207312\t937778:2\tG\t]X:89206255]G\t3\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=GTGTCGTAAAATACCGACGTATCTGTTATAATCGTCGGTGTCGTAAAATACCGACGTATAT;MAPQ=60;MATEID=937778:1;MATENM=9;NM=4;NUMPARTS=2;SCTG=c_23_89204501_89229501_6C;SPAN=1057;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:10:106:3.5:3.5,0,260.9:6:4:-3.214:18.96\nX\t93541300\t938557:1\tT\tT[X:93546506[\t46\tPASS\tEVDNC=ASSMB;HOMSEQ=TAT;MAPQ=60;MATEID=938557:2;MATENM=8;NM=1;NUMPARTS=2;SCTG=c_23_93541001_93566001_10C;SPAN=5206;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:15:8:4.2:46.2,4.2,0:15:0:-46.21:46.21\nX\t93546506\t938557:2\tT\t]X:93541300]T\t46\tPASS\tEVDNC=ASSMB;HOMSEQ=TAT;MAPQ=60;MATEID=938557:1;MATENM=1;NM=8;NUMPARTS=2;SCTG=c_23_93541001_93566001_10C;SPAN=5206;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:15:8:4.2:46.2,4.2,0:15:0:-46.21:46.21\nX\t93733574\t948094:1\tT\t]X:150010694]T\t29\tPASS\tEVDNC=ASSMB;HOMSEQ=TGG;MAPQ=60;MATEID=948094:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_23_149989001_150014001_9C;SPAN=56277120;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:10:6:2.7:29.7,2.7,0:10:0:-29.71:29.71\nX\t97170044\t939151:1\tA\tA[X:97179380[\t37\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=939151:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_23_97167001_97192001_10C;SPAN=9336;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:30:37.7:37.7,0,37.7:14:0:-37.78:37.78\nX\t97179380\t939151:2\tA\t]X:97170044]A\t37\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=939151:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_23_97167001_97192001_10C;SPAN=9336;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:14:30:37.7:37.7,0,37.7:14:0:-37.78:37.78\nX\t98861246\t939490:1\tG\tG[X:98861440[\t19\tPASS\tEVDNC=ASSMB;INSERTION=TAGGAAAAAC;MAPQ=60;MATEID=939490:2;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_23_98857501_98882501_8C;SPAN=194;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:25:19.4:19.4,0,42.5:8:0:-19.38:19.89\nX\t98861440\t939490:2\tG\t]X:98861246]G\t19\tPASS\tEVDNC=ASSMB;INSERTION=TAGGAAAAAC;MAPQ=60;MATEID=939490:1;MATENM=1;NM=1;NUMPARTS=2;SCTG=c_23_98857501_98882501_8C;SPAN=194;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:25:19.4:19.4,0,42.5:8:0:-19.38:19.89\nX\t104431017\t940520:1\tG\tG[X:104436824[\t34\tPASS\tEVDNC=ASSMB;HOMSEQ=AG;MAPQ=60;MATEID=940520:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_23_104419001_104444001_5C;SPAN=5807;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:31:34.4:34.4,0,41:13:0:-34.2:34.27\nX\t104436824\t940520:2\tA\t]X:104431017]A\t34\tPASS\tEVDNC=ASSMB;HOMSEQ=AG;MAPQ=60;MATEID=940520:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_23_104419001_104444001_5C;SPAN=5807;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:31:34.4:34.4,0,41:13:0:-34.2:34.27\nX\t105542844\t940773:2\tT\tT[2:157171629[\t29\tPASS\tEVDNC=ASSMB;HOMSEQ=AAAAT;MAPQ=60;MATEID=940773:1;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_23_105521501_105546501_0C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:10:10:2.7:29.7,2.7,0:10:0:-29.71:29.71\nX\t108048015\t941109:2\tT\tT[17:81970200[\t33\tPASS\tDISC_MAPQ=16;EVDNC=DSCRD;IMPRECISE;MAPQ=16;MATEID=941109:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=17:81970200(-)-23:108048015(+)__23_108045001_108070001D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:11:5:3:33,3,0:0:11:-33.01:33.01\nX\t111769097\t941661:2\tT\tT[14:20273533[\t42\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;INSERTION=A;MAPQ=60;MATEID=941661:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_23_111769001_111794001_6C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:13:14:3.9:42.9,3.9,0:9:8:-42.71:42.71\nX\t123838983\t943695:1\tC\tC[X:123839817[\t46\tPASS\tDISC_MAPQ=55;EVDNC=ASDIS;HOMSEQ=GGGGTTTCACCATGTTGGCCAGGCTGGTCTAGAACTCCTGAC;MAPQ=60;MATEID=943695:2;MATENM=1;NM=2;NUMPARTS=2;SCTG=c_23_123823001_123848001_34C;SPAN=834;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:15:6:4.2:46.2,4.2,0:11:7:-46.21:46.21\nX\t123839817\t943695:2\tG\t]X:123838983]G\t46\tPASS\tDISC_MAPQ=49;EVDNC=ASDIS;HOMSEQ=GGGGTTTCACCATGTTGGCCAGGCTGGTCTAGAACTCCTGAC;MAPQ=60;MATEID=943695:1;MATENM=2;NM=1;NUMPARTS=2;SCTG=c_23_123823001_123848001_34C;SPAN=834;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:15:6:4.2:46.2,4.2,0:11:7:-46.21:46.21\nX\t128240984\t944454:1\tA\tA[X:128745219[\t33\tPASS\tEVDNC=ASSMB;HOMSEQ=A;MAPQ=60;MATEID=944454:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_23_128723001_128748001_38C;SPAN=504235;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:11:7:3:33,3,0:11:0:-33.01:33.01\nX\t128745219\t944454:2\tA\t]X:128240984]A\t33\tPASS\tEVDNC=ASSMB;HOMSEQ=A;MAPQ=60;MATEID=944454:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_23_128723001_128748001_38C;SPAN=504235;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:11:7:3:33,3,0:11:0:-33.01:33.01\nX\t129004193\t944531:1\tT\tT[X:129005596[\t14\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=944531:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_23_128992501_129017501_5C;SPAN=1403;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:5:7:1.4:14.6,0,1.4:5:0:-14.96:14.96\nX\t129005596\t944531:2\tA\t]X:129004193]A\t14\tPASS\tEVDNC=ASSMB;MAPQ=60;MATEID=944531:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_23_128992501_129017501_5C;SPAN=1403;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:5:7:1.4:14.6,0,1.4:5:0:-14.96:14.96\nX\t131679239\t944851:1\tC\tC]X:131840248]\t52\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=GTGTGTGTCTA;MAPQ=60;MATEID=944851:2;MATENM=3;NM=0;NUMPARTS=2;SCTG=c_23_131834501_131859501_5C;SPAN=161009;SUBN=1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:18:5:4.8:52.8,4.8,0:16:3:-52.81:52.81\nX\t131840248\t944851:2\tA\tA]X:131679239]\t52\tPASS\tDISC_MAPQ=30;EVDNC=ASDIS;HOMSEQ=GTGTGTGTCTA;MAPQ=11;MATEID=944851:1;MATENM=0;NM=3;NUMPARTS=2;SCTG=c_23_131834501_131859501_5C;SPAN=161009;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:18:5:4.8:52.8,4.8,0:16:3:-52.81:52.81\nX\t135906193\t945454:1\tT\t]X:135906599]T\t27\tPASS\tDISC_MAPQ=51;EVDNC=ASDIS;HOMSEQ=TACTTGGTTTCCATATGCAT;MAPQ=60;MATEID=945454:2;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_23_135901501_135926501_3C;SPAN=406;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:32:27.5:27.5,0,50.6:9:6:-27.32:27.77\nX\t135906599\t945454:2\tT\tT[X:135906193[\t27\tPASS\tDISC_MAPQ=59;EVDNC=ASDIS;HOMSEQ=TACTTGGTTTCCATATGCAT;MAPQ=60;MATEID=945454:1;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_23_135901501_135926501_3C;SPAN=406;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:32:27.5:27.5,0,50.6:9:6:-27.32:27.77\nX\t136075840\t945488:1\tG\tG[X:136076155[\t26\tPASS\tEVDNC=ASSMB;HOMSEQ=AAGAAAATAAAACAGGG;MAPQ=60;MATEID=945488:2;MATENM=0;NM=9;NUMPARTS=2;SCTG=c_23_136073001_136098001_1C;SPAN=315;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:46:26.9:26.9,0,86.3:12:0:-26.68:28.57\nX\t136076155\t945488:2\tA\t]X:136075840]A\t26\tPASS\tEVDNC=ASSMB;HOMSEQ=AAGAAAATAAAACAGGG;MAPQ=60;MATEID=945488:1;MATENM=9;NM=0;NUMPARTS=2;SCTG=c_23_136073001_136098001_1C;SPAN=315;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:12:46:26.9:26.9,0,86.3:12:0:-26.68:28.57\nX\t136874391\t945666:2\tG\tG]9:30690082]\t32\tPASS\tDISC_MAPQ=24;EVDNC=DSCRD;IMPRECISE;MAPQ=24;MATEID=945666:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=9:30690082(+)-23:136874391(+)__23_136857001_136882001D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:11:16:5.6:32,0,5.6:0:11:-32.57:32.57\nX\t140075589\t946290:1\tC\t]X:140138868]C\t23\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=946290:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=23:140075589(-)-23:140138868(+)__23_140066501_140091501D;SPAN=63279;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:8:6:2.1:23.1,2.1,0:0:8:-23.11:23.11\nX\t140138868\t946290:2\tC\tC[X:140075589[\t23\tPASS\tDISC_MAPQ=56;EVDNC=DSCRD;IMPRECISE;MAPQ=56;MATEID=946290:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=23:140075589(-)-23:140138868(+)__23_140066501_140091501D;SPAN=63279;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:8:6:2.1:23.1,2.1,0:0:8:-23.11:23.11\nX\t141414291\t13066:2\tG\tG[1:53954735[\t0\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=CTG;MAPQ=60;MATEID=13066:1;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_1_53949001_53974001_18C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:94:0.2:0.2,0,234.5:6:4:0.01462:14.79\nX\t141421312\t946528:1\tC\tC[X:141427247[\t59\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=946528:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=23:141421312(+)-23:141427247(-)__23_141414001_141439001D;SPAN=5935;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:20:6:5.4:59.4,5.4,0:0:20:-59.41:59.41\nX\t141427247\t946528:2\tC\t]X:141421312]C\t59\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=946528:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=23:141421312(+)-23:141427247(-)__23_141414001_141439001D;SPAN=5935;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:20:6:5.4:59.4,5.4,0:0:20:-59.41:59.41\nX\t141915537\t946660:1\tT\tT]X:142187317]\t23\tPASS\tDISC_MAPQ=57;EVDNC=DSCRD;IMPRECISE;MAPQ=57;MATEID=946660:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=23:141915537(+)-23:142187317(+)__23_142173501_142198501D;SPAN=271780;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:8:2:2.1:23.1,2.1,0:0:8:-23.11:23.11\nX\t142187317\t946660:2\tT\tT]X:141915537]\t23\tPASS\tDISC_MAPQ=58;EVDNC=DSCRD;IMPRECISE;MAPQ=58;MATEID=946660:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=23:141915537(+)-23:142187317(+)__23_142173501_142198501D;SPAN=271780;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:8:2:2.1:23.1,2.1,0:0:8:-23.11:23.11\nX\t142905838\t887457:2\tA\tA]20:58493483]\t26\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=A;MAPQ=60;MATEID=887457:1;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_20_58481501_58506501_64C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:13:59:26.3:26.3,0,122:11:2:-26.33:29.85\nX\t143542896\t946917:1\tT\t]X:143646903]T\t39\tPASS\tDISC_MAPQ=56;EVDNC=ASDIS;INSERTION=GAATTTGTT;MAPQ=60;MATEID=946917:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_23_143643501_143668501_13C;SPAN=104007;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:13:12:3.6:39.6,3.6,0:7:11:-39.61:39.61\nX\t143646903\t946917:2\tA\tA[X:143542896[\t39\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;INSERTION=GAATTTGTT;MAPQ=60;MATEID=946917:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_23_143643501_143668501_13C;SPAN=104007;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:13:12:3.6:39.6,3.6,0:7:11:-39.61:39.61\nX\t144323981\t947033:1\tA\tA[X:144326855[\t46\tPASS\tDISC_MAPQ=54;EVDNC=DSCRD;IMPRECISE;MAPQ=54;MATEID=947033:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=23:144323981(+)-23:144326855(-)__23_144305001_144330001D;SPAN=2874;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:15:11:4.2:46.2,4.2,0:0:15:-46.21:46.21\nX\t144326855\t947033:2\tA\t]X:144323981]A\t46\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=947033:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=23:144323981(+)-23:144326855(-)__23_144305001_144330001D;SPAN=2874;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:15:11:4.2:46.2,4.2,0:0:15:-46.21:46.21\nX\t144475606\t947075:1\tN\t]Un_JTFH01001910v1_decoy:2437]N\t29\tPASS\tEVDNC=ASSMB;HOMSEQ=A;MAPQ=60;MATEID=947075:2;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_23_144452001_144477001_3C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:10:2:2.7:29.7,2.7,0:10:0:-29.71:29.71\nX\t145340657\t947300:1\tA\tA[X:145342987[\t46\tPASS\tDISC_MAPQ=59;EVDNC=DSCRD;IMPRECISE;MAPQ=59;MATEID=947300:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=23:145340657(+)-23:145342987(-)__23_145334001_145359001D;SPAN=2330;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:15:5:4.2:46.2,4.2,0:0:15:-46.21:46.21\nX\t145342987\t947300:2\tC\t]X:145340657]C\t46\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=947300:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=23:145340657(+)-23:145342987(-)__23_145334001_145359001D;SPAN=2330;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:15:5:4.2:46.2,4.2,0:0:15:-46.21:46.21\nX\t146484967\t947456:1\tT\t]X:146496410]T\t39\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=T;MAPQ=60;MATEID=947456:2;MATENM=0;NM=2;NUMPARTS=2;SCTG=c_23_146485501_146510501_5C;SPAN=11443;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:13:11:3.6:39.6,3.6,0:6:10:-39.61:39.61\nX\t146496410\t947456:2\tT\tT[X:146484967[\t39\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;HOMSEQ=T;MAPQ=60;MATEID=947456:1;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_23_146485501_146510501_5C;SPAN=11443;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:13:11:3.6:39.6,3.6,0:6:10:-39.61:39.61\nX\t148375423\t947827:1\tC\tC[X:148376430[\t36\tPASS\tDISC_MAPQ=56;EVDNC=DSCRD;IMPRECISE;MAPQ=56;MATEID=947827:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=23:148375423(+)-23:148376430(-)__23_148372001_148397001D;SPAN=1007;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:12:12:3.3:36.3,3.3,0:0:12:-36.31:36.31\nX\t148376430\t947827:2\tG\t]X:148375423]G\t36\tPASS\tDISC_MAPQ=60;EVDNC=DSCRD;IMPRECISE;MAPQ=60;MATEID=947827:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=23:148375423(+)-23:148376430(-)__23_148372001_148397001D;SPAN=1007;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:12:12:3.3:36.3,3.3,0:0:12:-36.31:36.31\nX\t148428177\t947841:1\tG\tG[X:148429717[\t56\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;INSERTION=TG;MAPQ=60;MATEID=947841:2;MATENM=0;NM=1;NUMPARTS=2;SCTG=c_23_148421001_148446001_6C;SPAN=1540;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:19:6:5.1:56.1,5.1,0:15:11:-56.11:56.11\nX\t148429717\t947841:2\tT\t]X:148428177]T\t56\tPASS\tDISC_MAPQ=60;EVDNC=ASDIS;INSERTION=TG;MAPQ=60;MATEID=947841:1;MATENM=1;NM=0;NUMPARTS=2;SCTG=c_23_148421001_148446001_6C;SPAN=1540;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:19:6:5.1:56.1,5.1,0:15:11:-56.11:56.11\nX\t149654088\t948062:1\tG\tG]X:149749267]\t47\tPASS\tDISC_MAPQ=59;EVDNC=DSCRD;IMPRECISE;MAPQ=59;MATEID=948062:2;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=23:149654088(+)-23:149749267(+)__23_149744001_149769001D;SPAN=95179;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:16:21:4.1:47,0,4.1:0:16:-48.75:48.75\nX\t149749267\t948062:2\tT\tT]X:149654088]\t47\tPASS\tDISC_MAPQ=56;EVDNC=DSCRD;IMPRECISE;MAPQ=56;MATEID=948062:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=23:149654088(+)-23:149749267(+)__23_149744001_149769001D;SPAN=95179;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:16:21:4.1:47,0,4.1:0:16:-48.75:48.75\nX\t150010694\t948094:2\tG\tG[X:93733574[\t29\tPASS\tEVDNC=ASSMB;HOMSEQ=TGG;MAPQ=60;MATEID=948094:1;MATENM=0;NM=0;NUMPARTS=2;SCTG=c_23_149989001_150014001_9C;SPAN=56277120;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:10:6:2.7:29.7,2.7,0:10:0:-29.71:29.71\nX\t150398269\t696185:2\tG\t]14:47771434]G\t22\tPASS\tDISC_MAPQ=23;EVDNC=DSCRD;IMPRECISE;MAPQ=23;MATEID=696185:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=14:47771434(+)-23:150398269(-)__14_47750501_47775501D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t0/1:8:16:15.5:22.1,0,15.5:0:8:-21.93:21.93\nX\t150398432\t948160:2\tT\tT[14:47771706[\t23\tPASS\tDISC_MAPQ=34;EVDNC=DSCRD;IMPRECISE;MAPQ=34;MATEID=948160:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=14:47771706(-)-23:150398432(+)__23_150381001_150406001D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:8:3:2.1:23.1,2.1,0:0:8:-23.11:23.11\nX\t154456620\t948741:2\tC\t[2:47092142[C\t56\tPASS\tDISC_MAPQ=5;EVDNC=ASDIS;HOMSEQ=G;MAPQ=18;MATEID=948741:1;MATENM=2;NM=0;NUMPARTS=2;SCTG=c_23_154448001_154473001_7C;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:19:7:5.1:56.1,5.1,0:12:9:-56.11:56.11\nX\t155159534\t948815:2\tC\tC[20:55808995[\t66\tPASS\tDISC_MAPQ=21;EVDNC=DSCRD;IMPRECISE;MAPQ=21;MATEID=948815:1;MATENM=-1;NM=-1;NUMPARTS=0;SCTG=20:55808995(-)-23:155159534(+)__23_155158501_155183501D;SPAN=-1;SVTYPE=BND\tGT:AD:DP:GQ:PL:SR:DR:LR:LO\t1/1:22:17:6:66,6,0:0:22:-66.02:66.02\n"
  },
  {
    "path": "tests/AnnotSV/test_24_HtzCompound/command_Tcl.sh",
    "content": "#!/bin/bash -x\n\nset -eo pipefail\n\n\ncut=\"$ANNOTSV/tests/AnnotSV/scripts/cutWithColumnNames.tcl\"\n\n\n\n######################################################################\n## First, we need to understand the data that will be used for TESTING\n######################################################################\n\n\n# In \"./input/test1.SV.vcf\", there is only 1 SV (identified in sample-002 but not in sample-001)\n################################################################################################################\n\n# CHROM  POS     ID      REF     ALT     QUAL    FILTER  INFO    FORMAT  sample-001      sample-002\n# 2       27313898        606     N       <DEL>   59.61   .       SVTYPE=DEL;SVLEN=-127;END=27314025;STRANDS=+-:6;CIPOS=-6,5;CIEND=-6,5;CIPOS95=0,0;CIEND95=0,0;SU=6;PE=0;SR=6    GT:SU:PE:SR:GQ:SQ:GL:DP:RO:AO:QR:QA:RS:AS:ASC:RP:AP:AB     0/0:2:0:2:117:0.00:-4,-16,-61:70:66:3:66:3:66:1:1:0:0:0.043     0/1:4:0:4:59:59.61:-15,-9,-43:61:52:8:52:8:52:6:2:0:0:0.13\n\n\n# To find the htz compound, we use a VCF (./input/test1.snvindel.vcf) with an indel present in the SV for each of the samples\n#############################################################################################################################\n\n# CHROM  POS     ID      REF     ALT     QUAL    FILTER  INFO    FORMAT  sample-001      sample-002\n# 2       27313998        606     A       ATC     59.61   .       CIPOS95=0,0;CIEND95=0,0;SU=6;PE=0;SR=6  GT:SU:PE:SR:GQ:SQ:GL:DP:RO:AO:QR:QA:RS:AS:ASC:RP:AP:AB  0/1:2:0:2:117:0.00:-4,-16,-61:70:66:3:66:3:66:1:1:0:0:0.043        0/1:4:0:4:59:59.61:-15,-9,-43:61:52:8:52:8:52:6:2:0:0:0.13\n\n\n# => In output, we must therefore have an htz compound only for sample-002 (since there is no SV in sample-001) on the \"split\" line\n\n\n\n###############################################################\n## TESTS\n###############################################################\n\n# The \"Sample_ID\" feature allows to better visualize the samples which contain the SV (in our example, only the sample \"sample-002\" contains the SV)\n# \"Samples_ID\" present in the \"./input/configfile\"\n\nmkdir -p ./output\nrm -f \"./output/test1_tcl.annotated.tsv\"\n$ANNOTSV/bin/AnnotSV -SVinputFile \"./input/test1.SV.vcf\" -candidateSnvIndelFiles \"./input/test1.snvindel.vcf\" -outputFile \"./output/test1_tcl.annotated.tsv\" -genomeBuild GRCh37\n\n# AnnotSV_ID                      Samples_ID      Annotation_mode compound_htz(sample-001)        compound_htz(sample-002)        ACMG_class\n# 2_27313892_27314030_DEL_1       sample-002      full                                                                            3\n# 2_27313892_27314030_DEL_1       sample-002      split                                           2_27313998                      full=3\n\nannotations=`$cut ./output/test1_tcl.annotated.tsv \"AnnotSV_ID;Samples_ID;Annotation_mode;compound_htz(sample-001);compound_htz(sample-002);ACMG_class\" | grep full`\n\nif [ `echo $annotations | grep -c \"sample-002\"` == 1 ] && [ `echo $annotations | grep -c \"sample-001\"` == 0 ]\nthen\n        echo \"Ok\"\nelse\n        echo \"error 1: Exomiser does not work (GRCh37-1SV)\"\n        exit 1\nfi\n\n\n\n# We check the cases for which this analysis cannot be carried out:\n# - Case 1: with a BED SV input file (-SVinputFile)\n# - Case 2: with a SV VCF input file without \"GT\" (-SVinputFile)\n# - Case 3: with a SNV/indel VCF file without \"GT\" (-candidateSnvIndelFiles)\n\n# Case 1: with a BED SV input file (-SVinputFile)\n#################################################\n\nrm -f \"./output/test1_tcl.annotated.tsv\"\n$ANNOTSV/bin/AnnotSV -SVinputFile \"./input/test1.SV.bed\" -candidateSnvIndelFiles \"./input/test1.snvindel.vcf\" -outputFile \"./output/test1_tcl.annotated.tsv\" -svtBEDcol 4 -genomeBuild GRCh37 &> ./output/output.log\n\nif [ `grep -c \"WARNING: The compound heterozygosity analysis is not available from a BED SV input file\" ./output/output.log` == 1 ]\nthen\n        echo \"Ok\"\nelse\n        echo \"error 1: No error message displayed for the use of -candidateSnvIndelFiles with a BED input file\"\n        exit 1\nfi\n\n\nannotations=`$cut \"./output/test1_tcl.annotated.tsv\" \"AnnotSV_ID;Samples_ID;Annotation_mode;compound_htz(sample-001);compound_htz(sample-002);ACMG_class\"`\n\n# AnnotSV_ID      Annotation_mode ACMG_class\n# 2_27313898_27314025_DEL_1       full    3\n# 2_27313898_27314025_DEL_1       split   full=3\n\nif [ `echo $annotations | grep -c \"compound_htz\"` == 0 ] \nthen\n        echo \"Ok\"\nelse\n        echo \"error 1: compound_htz annotations seem to be present. Should not with a BED input file\"\n        exit 1\nfi\n\n\n\n# Case 2: with a SV VCF input file without \"GT\" (-SVinputFile)\n##############################################################\n\nrm -f \"./output/test1_tcl.annotated.tsv\"\n$ANNOTSV/bin/AnnotSV -SVinputFile \"./input/test1.SV.withoutGT.vcf\" -candidateSnvIndelFiles \"./input/test1.snvindel.vcf\" -outputFile \"./output/test1_tcl.annotated.tsv\" -svtBEDcol 4 -genomeBuild GRCh37 &> ./output/output.log\n\n#...WARNING: The SV genotype is not indicated in the FORMAT column under the “GT” field\nif [ `grep -c \"WARNING: The SV genotype is not indicated in the FORMAT column under the \" ./output/output.log` == 1 ]\nthen\n        echo \"Ok\"\nelse\n        echo \"error 1: No error message displayed for the use of -candidateSnvIndelFiles with a SV VCF input file without GT\"\n        exit 1\nfi\n\nannotations=`$cut \"./output/test1_tcl.annotated.tsv\" \"AnnotSV_ID;Samples_ID;Annotation_mode;compound_htz(sample-001);compound_htz(sample-002);ACMG_class\"`\n\n# AnnotSV_ID      Samples_ID      Annotation_mode ACMG_class\n# 2_27313892_27314030_DEL_1       sample-001,sample-002   full    3\n# 2_27313892_27314030_DEL_1       sample-001,sample-002   split   full=3\n\nif [ `echo $annotations | grep -c \"compound_htz\"` == 0 ]\nthen\n        echo \"Ok\"\nelse\n        echo \"error 1: compound_htz annotations seem to be present. Should not with a SV VCF input file without GT\"\n        exit 1\nfi\n\n\n\n# Case 3: with a SNV/indel VCF file without \"GT\" (-candidateSnvIndelFiles)\n##########################################################################\nrm -f \"./output/test1_tcl.annotated.tsv\"\n$ANNOTSV/bin/AnnotSV -SVinputFile \"./input/test1.SV.vcf\" -candidateSnvIndelFiles \"./input/test1.snvindel.withoutGT.vcf\" -outputFile \"./output/test1_tcl.annotated.tsv\" -svtBEDcol 4 -genomeBuild GRCh37 &> ./output/output.log\n\n#...WARNING: The SNV/indel genotype is not indicated in the FORMAT column under the “GT” field\nif [ `grep -c \"WARNING: The SNV/indel genotype is not indicated in the FORMAT column under the\" ./output/output.log` == 1 ]\nthen\n        echo \"Ok\"\nelse\n        echo \"error 1: No error message displayed for the use of -candidateSnvIndelFiles with a SNV/indel VCF file without GT\"\n        exit 1\nfi\n\nannotations=`$cut \"./output/test1_tcl.annotated.tsv\" \"AnnotSV_ID;Samples_ID;Annotation_mode;compound_htz(sample-001);compound_htz(sample-002);ACMG_class\"`\n\n# AnnotSV_ID      Samples_ID      Annotation_mode ACMG_class\n# 2_27313892_27314030_DEL_1       sample-002      full    3\n# 2_27313892_27314030_DEL_1       sample-002      split   full=3\n\nif [ `echo $annotations | grep -c \"compound_htz\"` == 0 ]\nthen\n        echo \"Ok\"\nelse\n        echo \"error 1: compound_htz annotations seem to be present. Should not with a SNV/indel VCF file without GT\"\n        exit 1\nfi\n\n\n\n###############################################################\n## TESTS WITH 3 samples\n###############################################################\n\n\n# ./input/3samples.theSV.vcf\n############################\n# #CHROM  POS     ID      REF     ALT     QUAL    FILTER  INFO    FORMAT  father  mother  prob\n# chr1    934051  DEL00000005     G       <DEL>   .       PASS    IMPRECISE;SVTYPE=DEL;SVMETHOD=EMBL.DELLYv0.8.1;CHR2=chr1;END=934869;PE=10;MAPQ=60;CT=3to5;CIPOS=-72,72;CIEND=-72,72;RDRATIO=0.544828    GT:GL:GQ:FT:RCL:RC:RCR:CN:DR:DV:RR:RV 0/0:-51.0882,0,-14.6956:147:PASS:49:15:32:0:5:10:0:0    0/1:-9.60325,0,-21.6918:96:PASS:53:18:34:0:6:2:0:0      1/0:0,-2.37679,-28.3685:24:PASS:53:30:26:1:8:0:0:0\n\n# DEL: 1:934051-934869\n# => detected in \"mother,prob\"\n# => This SV overlaps only 1 gene: SAMD11\n\n\n# grep SAMD11 $ANNOTSV/share/AnnotSV/Annotations_Human/Genes/GRCh38/genes.RefSeq.sorted.bed\n# 1       923922  944574  +       SAMD11  NM_001385640    924431  944153  923922,925921,930154,931038,935771,939039,939271,941143,942135,942409,942558,943252,943697,943907,      924948,926013,930336,931089,935896,939129,939412,941306,942251,942488,943058,943377,943808,944574,\n\n# => SAMD11 (GRCh38) NM_001385640, 1:923922-944574\n\n\n\n# Search for htz SNVs that are in the overlapped gene (1:923922-944574) (not only in the gene-DEL intersection)\n###############################################################################################################\n\n# Extract from the SNV/indel file corresponding to the location of the gene (1:923922-944574) overlapped by the SV\n# (We notice that the order of the samples in the SNV/indel file is not the same as in the SV VCF!)\n\n#\t\tprob    father  mother\n#chr1 925036     0|0     0|1     0|1\n#chr1 925141     1|1     1|1     1|1\n#chr1 926250     0|0     0|1     0|1\n#chr1 926428     1|1     1|1     1|1\n#chr1 926713     1|1     1|1     1|1\n#chr1 926744     1|1     1|1     1|1\n#chr1 927003     1|1     1|1     1|1\n#chr1 927486     0|0     0|1     0|1\n#chr1 927744     1|1     1|1     1|1\n#chr1 928622     1|1     1|0     1|0\n#chr1 929346     1|1     1|1     1|1\n#chr1 929375     1|1     1|1     1|1\n#chr1 929377     1|1     1|1     1|1\n#chr1 929558     0|0     0|1     0|1\n#chr1 929839     1|1     1|0     1|0\n#chr1 930939     1|1     1|1     1|1\n#chr1 931131     0|0     0|1     0|1\n#chr1 931513     0|0     0|1     0|1\n#chr1 932204     0|0     0|1     0|1\n#chr1 932613     0|0     0|1     0|1\n#chr1 932949     1|1     1|1     1|1\n#chr1 932976     1|1     1|0     1|0\n#chr1 933024     0|0     0|1     0|1\n#chr1 933411     0|0     0|1     0|1\n#chr1 933511     1|1     1|1     1|1\n#chr1 933548     0|0     0|1     0|1\n#chr1 934601     0|0     0|1     0|1\n#chr1 934758     1|0     0|1     0|1\n#chr1 935523     0|0     0|1     0|1\n#chr1 935954     0|0     0|1     0|1\n#chr1 938178     0|0     0|1     0|1\n#chr1 939779     0|0     0|1     0|1\n#chr1 940262     0|0     0|0     0|1 \n#chr1 940263     0/0     0/1     0/2\n#chr1 940296     0|0     0|1     ./.\n#chr1 940390     0|0     0|1     0|1\n#chr1 940820     0|0     0|0     0|1 \n#chr1 941119     0|0     0|1     0|1\n#chr1 942335     0|0     0|1     0|1\n#chr1 943526     0|0     0|1     0|1\n#chr1 944296     0|0\t0|1\t0|1\n#chr1 944307     0|0\t0|1\t0|1\n\n# =>  1 snv/indel htz chez prob\n#    28 snv/indel htz chez father\n#    29 snv/indel htz chez mother\n\n\n# AnnotSV\n#########\n\n# AnnotSV must report the SNV/indel htz (not the hom) in the mother and the prob (not in the father who does not have this SV)\nrm -f \"./output/3samples_tcl.annotated.tsv\"\n$ANNOTSV/bin/AnnotSV -SVinputFile \"./input/3samples.theSV.vcf\" -candidateSnvIndelFiles \"./input/3samples.theSnvindel.vcf\" -candidateSnvIndelSamples \"prob father mother\" -genomeBuild GRCh38 -outputFile \"./output/3samples_tcl.annotated.tsv\" -includeCI 0\n\nn=`$cut \"./output/3samples_tcl.annotated.tsv\" \"AnnotSV_ID;compound_htz(father)\" | grep 934051 | tr \";|\\t\" \"\\n\" | grep -c \"1_\"`\n# 1_934051_934869_DEL_1\n# 1_934051_934869_DEL_1\n# => ok, nothing reported in the father\nif [ $n == 2 ]\nthen\n        echo \"Ok\"\nelse\n        echo \"error 1: some SNV/indel are reported in the father who does not have the SV\"\n        exit 1\nfi\n\n\nn=`$cut \"./output/3samples_tcl.annotated.tsv\" \"AnnotSV_ID;compound_htz(mother)\" | grep 934051 | tr \";|\\t\" \"\\n\" | grep -c \"1_\"`\n# 1_934051_934869_DEL_1\n# 1_934051_934869_DEL_1   1_925036;1_926250;1_927486;1_928622;1_929558;1_929839;1_931131;1_931513;1_932204;1_932613;1_932976;1_933024;1_933411;1_933548;1_934601;1_934758;1_935523;1_935954;1_938178;1_939779;1_940262;1_940263;1_940390;1_940820;1_941119;1_942335;1_943526;1_944296;1_944307\n# => ok, 29 snv/indel reporté chez la mother\nif [ $n == 31 ]\nthen\n        echo \"Ok\"\nelse\n        echo \"error 1: check the number of SNV/indel reported in the mother (who have the SV)\"\n        exit 1\nfi\n\nn=`$cut \"./output/3samples_tcl.annotated.tsv\" \"AnnotSV_ID;compound_htz(prob)\" | grep 934051 | tr \";|\\t\" \"\\n\" | grep -c \"1_\"`\n# 1_934051_934869_DEL_1\n# 1_934051_934869_DEL_1   1_934758\n# => ok, 1 snvindel reporté chez le prob\nif [ $n == 3 ]\nthen\n        echo \"Ok\"\nelse\n        echo \"error 1: check the number of SNV/indel reported in the probe (who have the SV)\"\n        exit 1\nfi\n\n\n\n# On refait en ne reportant que les snv/indel de chez \"prob father\"\n###################################################################\n\n# AnnotSV must report the SNV/indel htz (not the hom) in the prob (not in the father who does not have this SV, not in the mother absent from the \"-candidateSnvIndelSamples\" option)\nrm -f \"./output/3samples_tcl.annotated.tsv\"\n$ANNOTSV/bin/AnnotSV -SVinputFile \"./input/3samples.theSV.vcf\" -candidateSnvIndelFiles \"./input/3samples.theSnvindel.vcf\" -candidateSnvIndelSamples \"prob;father\" -genomeBuild GRCh38 -outputFile \"./output/3samples_tcl.annotated.tsv\" -includeCI 0\n\nn=`$cut \"./output/3samples_tcl.annotated.tsv\" \"AnnotSV_ID;compound_htz(father)\" | grep 934051 | tr \";|\\t\" \"\\n\" | grep -c \"1_\"`\nif [ $n == 2 ]\nthen\n        echo \"Ok\"\nelse\n        echo \"error 1: some SNV/indel are reported in the father who does not have the SV\"\n        exit 1\nfi\n\n\nn=`$cut \"./output/3samples_tcl.annotated.tsv\" \"AnnotSV_ID;compound_htz(mother)\" | grep 934051 | tr \";|\\t\" \"\\n\" | grep -c \"1_\"`\nif [ $n == 2 ]\nthen\n        echo \"Ok\"\nelse\n        echo \"error 1: some SNV/indel are reported in the mother who should not be reported\"\n        exit 1\nfi\n\nn=`$cut \"./output/3samples_tcl.annotated.tsv\" \"AnnotSV_ID;compound_htz(prob)\" | grep 934051 | tr \";|\\t\" \"\\n\" | grep -c \"1_\"`\nif [ $n == 3 ]\nthen\n        echo \"Ok\"\nelse\n        echo \"error 1: check the number of SNV/indel reported in the probe (who have the SV)\"\n        exit 1\nfi\n\n\n\necho \"ok - Finished\"\n\n\n\n\n"
  },
  {
    "path": "tests/AnnotSV/test_24_HtzCompound/input/3samples.severalSV.vcf",
    "content": "##fileformat=VCFv4.2\n##FILTER=<ID=PASS,Description=\"All filters passed\">\n##ALT=<ID=DEL,Description=\"Deletion\">\n##ALT=<ID=DUP,Description=\"Duplication\">\n##ALT=<ID=INV,Description=\"Inversion\">\n##ALT=<ID=BND,Description=\"Translocation\">\n##ALT=<ID=INS,Description=\"Insertion\">\n##FILTER=<ID=LowQual,Description=\"Poor quality and insufficient number of PEs and SRs.\">\n##INFO=<ID=CIEND,Number=2,Type=Integer,Description=\"PE confidence interval around END\">\n##INFO=<ID=CIPOS,Number=2,Type=Integer,Description=\"PE confidence interval around POS\">\n##INFO=<ID=CHR2,Number=1,Type=String,Description=\"Chromosome for END coordinate in case of a translocation\">\n##INFO=<ID=END,Number=1,Type=Integer,Description=\"End position of the structural variant\">\n##INFO=<ID=PE,Number=1,Type=Integer,Description=\"Paired-end support of the structural variant\">\n##INFO=<ID=MAPQ,Number=1,Type=Integer,Description=\"Median mapping quality of paired-ends\">\n##INFO=<ID=SRMAPQ,Number=1,Type=Integer,Description=\"Median mapping quality of split-reads\">\n##INFO=<ID=SR,Number=1,Type=Integer,Description=\"Split-read support\">\n##INFO=<ID=SRQ,Number=1,Type=Float,Description=\"Split-read consensus alignment quality\">\n##INFO=<ID=CONSENSUS,Number=1,Type=String,Description=\"Split-read consensus sequence\">\n##INFO=<ID=CE,Number=1,Type=Float,Description=\"Consensus sequence entropy\">\n##INFO=<ID=CT,Number=1,Type=String,Description=\"Paired-end signature induced connection type\">\n##INFO=<ID=IMPRECISE,Number=0,Type=Flag,Description=\"Imprecise structural variation\">\n##INFO=<ID=PRECISE,Number=0,Type=Flag,Description=\"Precise structural variation\">\n##INFO=<ID=SVTYPE,Number=1,Type=String,Description=\"Type of structural variant\">\n##INFO=<ID=SVMETHOD,Number=1,Type=String,Description=\"Type of approach used to detect SV\">\n##INFO=<ID=INSLEN,Number=1,Type=Integer,Description=\"Predicted length of the insertion\">\n##INFO=<ID=HOMLEN,Number=1,Type=Integer,Description=\"Predicted microhomology length using a max. edit distance of 2\">\n##FORMAT=<ID=GT,Number=1,Type=String,Description=\"Genotype\">\n##FORMAT=<ID=GL,Number=G,Type=Float,Description=\"Log10-scaled genotype likelihoods for RR,RA,AA genotypes\">\n##FORMAT=<ID=GQ,Number=1,Type=Integer,Description=\"Genotype Quality\">\n##FORMAT=<ID=FT,Number=1,Type=String,Description=\"Per-sample genotype filter\">\n##FORMAT=<ID=RC,Number=1,Type=Integer,Description=\"Raw high-quality read counts for the SV\">\n##FORMAT=<ID=RCL,Number=1,Type=Integer,Description=\"Raw high-quality read counts for the left control region\">\n##FORMAT=<ID=RCR,Number=1,Type=Integer,Description=\"Raw high-quality read counts for the right control region\">\n##FORMAT=<ID=CN,Number=1,Type=Integer,Description=\"Read-depth based copy-number estimate for autosomal sites\">\n##FORMAT=<ID=DR,Number=1,Type=Integer,Description=\"# high-quality reference pairs\">\n##FORMAT=<ID=DV,Number=1,Type=Integer,Description=\"# high-quality variant pairs\">\n##FORMAT=<ID=RR,Number=1,Type=Integer,Description=\"# high-quality reference junction reads\">\n##FORMAT=<ID=RV,Number=1,Type=Integer,Description=\"# high-quality variant junction reads\">\n#CHROM\tPOS\tID\tREF\tALT\tQUAL\tFILTER\tINFO\tFORMAT\tfather\tmother\tprob\nchr1\t820046\tDUP00000003\tC\t<DUP>\t.\tPASS\tIMPRECISE;SVTYPE=DUP;SVMETHOD=EMBL.DELLYv0.8.1;CHR2=chr1;END=821202;PE=9;MAPQ=33;CT=5to3;CIPOS=-50,50;CIEND=-50,50;RDRATIO=2.63448\tGT:GL:GQ:FT:RCL:RC:RCR:CN:DR:DV:RR:RV\t0/0:0,-8.42878,-166:84:PASS:93:145:94:2:28:0:0:0\t0/1:-16.9096,0,-182.862:10000:PASS:101:399:115:4:36:13:0:0\t0/1:-4.01947,0,-161.901:40:PASS:95:382:92:4:31:7:0:0\nchr1\t820998\tDEL00000003\tG\t<DEL>\t.\tPASS\tIMPRECISE;SVTYPE=DEL;SVMETHOD=EMBL.DELLYv0.8.1;CHR2=chr1;END=823044;PE=5;MAPQ=28;CT=3to5;CIPOS=-50,50;CIEND=-50,50;RDRATIO=0.614482\tGT:GL:GQ:FT:RCL:RC:RCR:CN:DR:DV:RR:RV\t0/0:0,-5.41743,-96.4989:54:PASS:136:279:134:2:18:0:0:0\t0/1:-20.0978,0,-115.444:10000:PASS:355:454:360:1:24:18:0:0\t0/1:-20.4472,0,-81.7172:10000:PASS:355:372:327:1:18:15:0:0\nchr1\t822298\tDEL00000004\tA\t<DEL>\t.\tLowQual\tIMPRECISE;SVTYPE=DEL;SVMETHOD=EMBL.DELLYv0.8.1;CHR2=chr1;END=823305;PE=2;MAPQ=22;CT=3to5;CIPOS=-402,402;CIEND=-402,402;RDRATIO=0.707427\tGT:GL:GQ:FT:RCL:RC:RCR:CN:DR:DV:RR:RV\t0/0:0,-6.32071,-120.699:63:PASS:58:130:69:2:21:0:0:0\t0/1:-22.151,0,-174.315:10000:PASS:90:236:252:1:33:20:0:0\t0/1:-29.6254,0,-142.317:10000:PASS:77:210:213:1:29:28:0:0\nchr1\t822365\tDUP00000005\tA\t<DUP>\t.\tPASS\tIMPRECISE;SVTYPE=DUP;SVMETHOD=EMBL.DELLYv0.8.1;CHR2=chr1;END=822965;PE=6;MAPQ=40;CT=5to3;CIPOS=-219,219;CIEND=-219,219;RDRATIO=1.24842\tGT:GL:GQ:FT:RCL:RC:RCR:CN:DR:DV:RR:RV\t0/0:0,-4.75717,-87.5407:48:PASS:35:77:34:2:16:0:0:0\t0/1:-23.4586,0,-154.16:10000:PASS:59:163:58:3:30:16:0:0\t0/1:-37.2754,0,-107.034:10000:PASS:51:141:54:3:22:27:0:0\nchr1\t934051\tDEL00000005\tG\t<DEL>\t.\tPASS\tIMPRECISE;SVTYPE=DEL;SVMETHOD=EMBL.DELLYv0.8.1;CHR2=chr1;END=934869;PE=10;MAPQ=60;CT=3to5;CIPOS=-72,72;CIEND=-72,72;RDRATIO=0.544828\tGT:GL:GQ:FT:RCL:RC:RCR:CN:DR:DV:RR:RV\t0/0:-51.0882,0,-14.6956:147:PASS:49:15:32:0:5:10:0:0\t0/1:-9.60325,0,-21.6918:96:PASS:53:18:34:0:6:2:0:0\t1/0:0,-2.37679,-28.3685:24:PASS:53:30:26:1:8:0:0:0\nchr1\t2652714\tDEL00000018\tG\t<DEL>\t.\tLowQual\tIMPRECISE;SVTYPE=DEL;SVMETHOD=EMBL.DELLYv0.8.1;CHR2=chr1;END=2676785;PE=2;MAPQ=42;CT=3to5;CIPOS=-467,467;CIEND=-467,467;RDRATIO=0.78942\tGT:GL:GQ:FT:RCL:RC:RCR:CN:DR:DV:RR:RV\t0/1:-1.61381,0,-76.7451:16:PASS:2197:5008:2739:2:18:5:0:0\t0/0:0,-2.11657,-77.6304:21:PASS:2026:5308:2104:3:15:3:0:0\t0/0:0,-4.81244,-82.096:48:PASS:1943:4060:1591:2:16:0:0:0\nchr1\t2685587\tDUP00000037\tC\t<DUP>\t.\tLowQual\tIMPRECISE;SVTYPE=DUP;SVMETHOD=EMBL.DELLYv0.8.1;CHR2=chr1;END=2685897;PE=2;MAPQ=40;CT=5to3;CIPOS=-507,507;CIEND=-507,507;RDRATIO=1.27136\tGT:GL:GQ:FT:RCL:RC:RCR:CN:DR:DV:RR:RV\t0/0:0,-2.01703,-69.9355:20:PASS:6143:21058:8717:3:18:3:0:0\t0/1:-1.29188,0,-55.3469:13:LowQual:3201:20645:8258:4:16:3:0:0\t0/1:-3.20596,0,-38.785:32:PASS:3145:11312:4454:3:12:4:0:0\nchr1\t3181075\tDUP00000046\tG\t<DUP>\t.\tPASS\tIMPRECISE;SVTYPE=DUP;SVMETHOD=EMBL.DELLYv0.8.1;CHR2=chr1;END=3181767;PE=7;MAPQ=60;CT=5to3;CIPOS=-511,511;CIEND=-511,511;RDRATIO=1.79409\tGT:GL:GQ:FT:RCL:RC:RCR:CN:DR:DV:RR:RV\t0/1:-21.8763,0,-89.0972:10000:PASS:45:126:43:3:16:7:0:0\t0/1:-4.17323,0,-136.173:42:PASS:59:120:61:2:24:2:0:0\t0/0:0,-4.51544,-90:45:PASS:49:83:55:2:15:0:0:0\nchr1\t6558910\tINV00000001\tG\t<INV>\t.\tPASS\tPRECISE;SVTYPE=INV;SVMETHOD=EMBL.DELLYv0.8.1;CHR2=chr1;END=6559723;PE=6;MAPQ=42;CT=3to3;CIPOS=-4,4;CIEND=-4,4;SRMAPQ=60;INSLEN=0;HOMLEN=3;SR=13;SRQ=0.972678;CONSENSUS=CAGGCGATCCTCCTGCCTCAGCCTCCCAAGTAGCTGGGATCACAGACATGTGCCAGCATGCCCGGCTAATTTTTGTACTTTTTTTTTTTTTTTGAGTACTAGGATTACAGGCGTGAACCACCTCGCCTGGCCAAAACCTCAGGCTTTTTTTTTTTTTTTTATGGGAGGGAGTCTCGCTCTGTC;CE=1.95845;RDRATIO=1.23005\tGT:GL:GQ:FT:RCL:RC:RCR:CN:DR:DV:RR:RV\t0/1:-15.776,0,-59.0749:157:PASS:45:75:62:1:20:4:19:7\t0/1:-31.9723,0,-44.0907:10000:PASS:32:95:50:2:16:2:15:14\t0/0:0,-6.31857,-73.8969:63:PASS:40:81:46:2:18:0:21:0\nchr1\t6559056\tINV00000002\tT\t<INV>\t.\tPASS\tIMPRECISE;SVTYPE=INV;SVMETHOD=EMBL.DELLYv0.8.1;CHR2=chr1;END=6559640;PE=3;MAPQ=60;CT=5to5;CIPOS=-560,560;CIEND=-560,560;RDRATIO=1.35335\tGT:GL:GQ:FT:RCL:RC:RCR:CN:DR:DV:RR:RV\t0/0:0,-6.92368,-138:69:PASS:31:53:39:2:23:0:0:0\t0/1:-30.2681,0,-128.682:10000:PASS:18:74:28:3:23:8:0:0\t0/0:0,-8.1278,-162:81:PASS:20:63:33:2:27:0:0:0\nchr1\t7856597\tINS00000001\tT\t<INS>\t.\tPASS\tPRECISE;SVTYPE=INS;SVMETHOD=EMBL.DELLYv0.8.1;CHR2=chr1;END=7856598;PE=0;MAPQ=0;CT=NtoN;CIPOS=-3,3;CIEND=-3,3;SRMAPQ=60;INSLEN=63;HOMLEN=3;SR=6;SRQ=0.989011;CONSENSUS=GGGCAAATAAAGTGAAGAGAGTCCCTGGGGGACCCCTGCTGCTGACAGTTGGGGAACCTTCCCGAAGGCCCAGGCTGGCTGTGTGGGAGCGCCTGGAGGCCTCGGCAGGAGAGCCCAGGGCAAGTGCTCGCACACTGTCCTCTAAGATGGAAAG;CE=1.93496;RDRATIO=1.00027\tGT:GL:GQ:FT:RCL:RC:RCR:CN:DR:DV:RR:RV\t0/1:-83.0527,0,-62.1538:10000:PASS:17750:34730:16969:2:0:0:21:27\t0/0:0,-10.5318,-126.896:105:PASS:21823:37243:15403:2:0:0:35:0\t0/1:-127.743,0,-45.845:10000:PASS:20198:37430:17205:2:0:0:18:40\nchr1\t10422452\tDEL00000039\tA\t<DEL>\t.\tPASS\tIMPRECISE;SVTYPE=DEL;SVMETHOD=EMBL.DELLYv0.8.1;CHR2=chr1;END=10423709;PE=31;MAPQ=60;CT=3to5;CIPOS=-50,50;CIEND=-50,50;RDRATIO=0.502513\tGT:GL:GQ:FT:RCL:RC:RCR:CN:DR:DV:RR:RV\t0/0:0,-9.93398,-198:99:PASS:73:151:61:2:33:0:0:0\t0/1:-65.8619,0,-132.862:10000:PASS:76:94:90:1:24:13:0:0\t0/1:-102.862,0,-96.8619:10000:PASS:50:60:85:1:18:19:0:0\nchr1\t12148732\tDEL00000044\tA\t<DEL>\t.\tPASS\tPRECISE;SVTYPE=DEL;SVMETHOD=EMBL.DELLYv0.8.1;CHR2=chr1;END=12148807;PE=0;MAPQ=0;CT=3to5;CIPOS=-2,2;CIEND=-2,2;SRMAPQ=60;INSLEN=0;HOMLEN=1;SR=6;SRQ=0.993378;CONSENSUS=TGAGACAGGGTCTTCCTCTGTCACCCAGGCTGGAATGCAGTGGCACAAATACAGCTCAGCCACCATGACTGGCTAATTTTTTTTTTTCTTTTTTTGTAGAGACAGGTCTCTCTATGTTGCCCAGGCTGGTCTTGAATTCCTGGGCTCAAGC;CE=1.97614;RDRATIO=0.785709\tGT:GL:GQ:FT:RCL:RC:RCR:CN:DR:DV:RR:RV\t0/1:-17.8784,0,-52.2761:10000:PASS:811:1455:823:2:0:0:17:7\t0/0:0,-10.8301,-125.193:108:PASS:1803:3728:1624:2:0:0:36:0\t0/0:0,-10.2298,-119.095:102:PASS:1585:3409:1423:2:0:0:34:0\nchr1\t14109814\tDEL00000050\tG\t<DEL>\t.\tPASS\tIMPRECISE;SVTYPE=DEL;SVMETHOD=EMBL.DELLYv0.8.1;CHR2=chr1;END=14111747;PE=8;MAPQ=60;CT=3to5;CIPOS=-163,163;CIEND=-163,163;RDRATIO=0.554582\tGT:GL:GQ:FT:RCL:RC:RCR:CN:DR:DV:RR:RV\t0/1:-36.6732,0,-100.175:10000:PASS:127:131:100:1:18:8:0:0\t0/0:0,-9.63295,-192:96:PASS:137:282:134:2:32:0:0:0\t0/0:0,-7.52574,-150:75:PASS:114:217:113:2:25:0:0:0\nchr1\t14110577\tDEL00000051\tG\t<DEL>\t.\tPASS\tPRECISE;SVTYPE=DEL;SVMETHOD=EMBL.DELLYv0.8.1;CHR2=chr1;END=14112445;PE=0;MAPQ=0;CT=3to5;CIPOS=-5,5;CIEND=-5,5;SRMAPQ=60;INSLEN=0;HOMLEN=5;SR=12;SRQ=0.995595;CONSENSUS=TGTGACCCATACAACTTACAACAGTGCTATGGTTTAGGCACTCTTATTATCCAGATCATTTTGTAGTTTTTTGACTTCTATTGCATATCTATCTATTTCTCTTAGGAGGTCTTGATTCCAAGAAGTGATGTCCTGGCTTTTAGGAGAAAGAACTTTGTTGGGAGCATGGCAGACACTCTCCTCTCACTCCCAGGGACCCTCACCCTTGTACGATCACTTCTCCATTC;CE=1.95846;RDRATIO=0.59767\tGT:GL:GQ:FT:RCL:RC:RCR:CN:DR:DV:RR:RV\t0/1:-45.1728,0,-37.973:10000:PASS:96:129:100:1:0:0:13:15\t0/0:0,-9.32851,-111.897:93:PASS:127:272:120:2:0:0:31:0\t0/0:0,-8.72465,-100.695:87:PASS:90:213:112:2:0:0:29:0\nchr1\t19758178\tDEL00000063\tA\t<DEL>\t.\tPASS\tPRECISE;SVTYPE=DEL;SVMETHOD=EMBL.DELLYv0.8.1;CHR2=chr1;END=19758303;PE=0;MAPQ=0;CT=3to5;CIPOS=-2,2;CIEND=-2,2;SRMAPQ=60;INSLEN=0;HOMLEN=1;SR=8;SRQ=0.994413;CONSENSUS=TCCCTGGCCTCATGTTTCCATGTGAGGGACCATTTACCATGACACAGTCCCTGAAGTCTTGAAGTTTGAGGTTTCGGCTTCTGCAAAAGAAGTTATTAGATTCAGTAAACTTCCATGGAAAAAAAGGAGCTCCTTCCTTCCCCCATAGGAGCAAAGACTACTGTGCCCACGTGATAATCAA;CE=1.98946;RDRATIO=0.66071\tGT:GL:GQ:FT:RCL:RC:RCR:CN:DR:DV:RR:RV\t0/0:0,-7.22132,-84.9966:72:PASS:2326:3713:1840:2:0:0:24:0\t0/1:-58.3633,0,-52.2639:10000:PASS:2200:3226:2856:1:0:0:18:20\t0/0:0,-9.9291,-117.195:99:PASS:2361:4872:2684:2:0:0:33:0\nchr1\t20170696\tDEL00000064\tA\t<DEL>\t.\tPASS\tPRECISE;SVTYPE=DEL;SVMETHOD=EMBL.DELLYv0.8.1;CHR2=chr1;END=20171245;PE=0;MAPQ=0;CT=3to5;CIPOS=-7,7;CIEND=-7,7;SRMAPQ=60;INSLEN=0;HOMLEN=6;SR=10;SRQ=1;CONSENSUS=CTCGCTCTCAGCCCTGCTCCTGGGGGCAGGGGCTTGGCAAGGTGGGGGTGGGGATGACAGGGGCTGGCCTGGTCCTCACGGGCTGGGTCAGCTGAGGAGGTGTCACAGAAAAGACACTTTGCTTTAGGCCTGAGAAGGACCACACCAGAGAGCTCCAACTCAGGAAGTCTCCTTGAGCTCACGTGGGGAACAAAAGGGGGTTCT;CE=1.94894;RDRATIO=0.377622\tGT:GL:GQ:FT:RCL:RC:RCR:CN:DR:DV:RR:RV\t0/0:0,-8.42448,-98.0956:84:PASS:25:65:35:2:0:0:28:0\t0/1:-38.1738,0,-42.274:10000:PASS:36:27:30:1:0:0:14:13\t0/0:0,-9.3271,-108.095:93:PASS:35:65:34:2:0:0:31:0\nchr1\t20605515\tDEL00000065\tC\t<DEL>\t.\tPASS\tIMPRECISE;SVTYPE=DEL;SVMETHOD=EMBL.DELLYv0.8.1;CHR2=chr1;END=20606215;PE=9;MAPQ=60;CT=3to5;CIPOS=-57,57;CIEND=-57,57;RDRATIO=0.617783\tGT:GL:GQ:FT:RCL:RC:RCR:CN:DR:DV:RR:RV\t0/1:-24.8764,0,-80.6787:10000:PASS:46:46:36:1:18:6:0:0\t0/1:-18.2823,0,-71.6804:10000:PASS:34:26:54:1:15:4:0:0\t0/0:0,-11.4352,-185.396:114:PASS:47:79:40:2:38:0:0:0\nchr1\t22577954\tDUP00000081\tT\t<DUP>\t.\tPASS\tIMPRECISE;SVTYPE=DUP;SVMETHOD=EMBL.DELLYv0.8.1;CHR2=chr1;END=22578478;PE=5;MAPQ=25;CT=5to3;CIPOS=-266,266;CIEND=-266,266;RDRATIO=1.321\tGT:GL:GQ:FT:RCL:RC:RCR:CN:DR:DV:RR:RV\t0/0:0,-2.22471,-127.046:22:PASS:47:111:66:2:22:2:0:0\t0/1:-0.683525,0,-67.4431:8:LowQual:53:88:57:2:12:4:0:0\t0/1:-5.58353,0,-73.1866:56:PASS:51:109:33:3:13:3:0:0\nchr1\t23930981\tDEL00000071\tG\t<DEL>\t.\tPASS\tIMPRECISE;SVTYPE=DEL;SVMETHOD=EMBL.DELLYv0.8.1;CHR2=chr1;END=23932202;PE=28;MAPQ=60;CT=3to5;CIPOS=-81,81;CIEND=-81,81;RDRATIO=0.414365\tGT:GL:GQ:FT:RCL:RC:RCR:CN:DR:DV:RR:RV\t0/1:-91.063,0,-83.2011:10000:PASS:46:71:89:1:16:20:0:0\t0/0:0,-10.235,-204:102:PASS:68:181:73:3:34:0:0:0\t0/1:-56.8712,0,-93.5712:10000:PASS:68:75:73:1:17:11:0:0\nchr1\t24193858\tDEL00000072\tA\t<DEL>\t.\tPASS\tIMPRECISE;SVTYPE=DEL;SVMETHOD=EMBL.DELLYv0.8.1;CHR2=chr1;END=24197185;PE=44;MAPQ=60;CT=3to5;CIPOS=-113,113;CIEND=-113,113;RDRATIO=0.500813\tGT:GL:GQ:FT:RCL:RC:RCR:CN:DR:DV:RR:RV\t0/1:-153.27,0,-3.27014:33:PASS:190:21:218:0:2:27:0:0\t0/0:0,-9.33192,-186:93:PASS:225:410:215:2:31:0:0:0\t0/1:-98.367,0,-74.3671:10000:PASS:210:196:210:1:14:18:0:0\nchr1\t25287801\tINV00000025\tA\t<INV>\t.\tPASS\tIMPRECISE;SVTYPE=INV;SVMETHOD=EMBL.DELLYv0.8.1;CHR2=chr1;END=25405610;PE=5;MAPQ=52;CT=3to3;CIPOS=-389,389;CIEND=-389,389;RDRATIO=1.00182\tGT:GL:GQ:FT:RCL:RC:RCR:CN:DR:DV:RR:RV\t0/1:-31.9714,0,-86.5497:10000:PASS:5874:9916:6673:2:18:10:0:0\t0/0:0,-7.82662,-146.2:78:PASS:6176:10716:7408:2:26:0:0:0\t0/0:0,-7.82659,-146.9:78:PASS:5624:9778:6906:2:26:0:0:0\nchr1\t26133642\tDEL00000075\tG\t<DEL>\t.\tPASS\tIMPRECISE;SVTYPE=DEL;SVMETHOD=EMBL.DELLYv0.8.1;CHR2=chr1;END=26138279;PE=30;MAPQ=60;CT=3to5;CIPOS=-50,50;CIEND=-50,50;RDRATIO=0.503467\tGT:GL:GQ:FT:RCL:RC:RCR:CN:DR:DV:RR:RV\t0/0:0,-4.21441,-84:42:PASS:283:502:262:2:14:0:0:0\t0/1:-76.1732,0,-64.1732:10000:PASS:284:275:309:1:12:14:0:0\t0/1:-86.9722,0,-51.8759:10000:PASS:289:244:279:1:10:17:0:0\nchr1\t26562904\tDUP00000087\tT\t<DUP>\t.\tPASS\tIMPRECISE;SVTYPE=DUP;SVMETHOD=EMBL.DELLYv0.8.1;CHR2=chr1;END=26565718;PE=19;MAPQ=60;CT=5to3;CIPOS=-107,107;CIEND=-107,107;RDRATIO=1.53591\tGT:GL:GQ:FT:RCL:RC:RCR:CN:DR:DV:RR:RV\t0/0:0,-9.63295,-192:96:PASS:178:336:167:2:32:0:0:0\t0/1:-96.4495,0,-153.25:10000:PASS:177:540:184:3:28:21:0:0\t0/0:0,-7.22471,-144:72:PASS:163:335:184:2:24:0:0:0\nchr1\t29678178\tDEL00000079\tT\t<DEL>\t.\tPASS\tPRECISE;SVTYPE=DEL;SVMETHOD=EMBL.DELLYv0.8.1;CHR2=chr1;END=29678234;PE=0;MAPQ=0;CT=3to5;CIPOS=-17,17;CIEND=-17,17;SRMAPQ=60;INSLEN=0;HOMLEN=21;SR=4;SRQ=1;CONSENSUS=GTAAAAGCAGCAGTGGGCATAGTAAGCACTAAATAAAGAAACGTTAGAAATCAGCATTGTCAGATTTTCTTTCTTTCTTTCTTTTTTTTTTTTTGAGATGGAGTCTTGCTCTTGTCACCCAGGCTGGAGTGCAATGGCACAATCTC;CE=1.95118;RDRATIO=0.742239\tGT:GL:GQ:FT:RCL:RC:RCR:CN:DR:DV:RR:RV\t0/1:-35.579,0,-31.0771:10000:PASS:996:1394:864:1:0:0:12:13\t0/0:0,-8.71767,-93.2878:87:PASS:1450:2594:1119:2:0:0:29:0\t0/1:-22.0825,0,-32.5838:10000:PASS:851:1113:769:1:0:0:12:9\nchr1\t31908111\tDEL00000081\tA\t<DEL>\t.\tPASS\tPRECISE;SVTYPE=DEL;SVMETHOD=EMBL.DELLYv0.8.1;CHR2=chr1;END=31908198;PE=0;MAPQ=0;CT=3to5;CIPOS=-10,10;CIEND=-10,10;SRMAPQ=60;INSLEN=0;HOMLEN=9;SR=14;SRQ=0.99537;CONSENSUS=AAAATAAAAACAAAACAAAAGGCTCTTGGCTACTTTGCCTAGTATTAGATAGGGTTTTGAAGAAACTAACATGAACACCCTTTCATCAGTAAAGACTAAAAACCACCTGGAATATATATATCACTGCTGTTTTTTTGGTGTTGTTTTTTGTTTTTTTTTTTTTTTATCTAAAAGTGCCCAGGTGGGCTTAAGGCTGCCAGACTGCACGCACATCT;CE=1.93145;RDRATIO=0.505173\tGT:GL:GQ:FT:RCL:RC:RCR:CN:DR:DV:RR:RV\t0/0:0,-1.50402,-16.6989:15:PASS:667:678:447:1:0:0:5:0\t1/1:-61.8967,-2.51712,0:25:PASS:938:503:698:1:0:0:1:19\t0/0:0,-1.80465,-19.7985:18:PASS:591:472:481:1:0:0:6:0\nchr1\t36958595\tDEL00000085\tG\t<DEL>\t.\tPASS\tIMPRECISE;SVTYPE=DEL;SVMETHOD=EMBL.DELLYv0.8.1;CHR2=chr1;END=36960193;PE=3;MAPQ=41;CT=3to5;CIPOS=-154,154;CIEND=-154,154;RDRATIO=0.532329\tGT:GL:GQ:FT:RCL:RC:RCR:CN:DR:DV:RR:RV\t0/1:-11.1876,0,-44.4335:112:PASS:69:92:98:1:8:4:0:0\t0/0:0,-3.91338,-78:39:PASS:50:178:122:2:13:0:0:0\t0/0:0,-3.0103,-60:30:PASS:63:142:106:2:10:0:0:0\nchr1\t37350877\tDEL00000086\tA\t<DEL>\t.\tPASS\tPRECISE;SVTYPE=DEL;SVMETHOD=EMBL.DELLYv0.8.1;CHR2=chr1;END=37351115;PE=0;MAPQ=0;CT=3to5;CIPOS=-4,4;CIEND=-4,4;SRMAPQ=60;INSLEN=0;HOMLEN=3;SR=20;SRQ=0.980861;CONSENSUS=TGAATGGGTTAGTGAATCCTTGTGTTTACTTATCTTGTCCTCCCCAAAGCTAAGAGGGCTGGACCCAACTCCCTCTGCAGATGCTTTTCCAGAACCCCTGGAACCCCTGGCAAACACAAATCTTTTTACCATCTCCATAGTTTTGCCTGAGAAACTATTTTTTAAACTAGAAAATTAGAGCATATGACCTCACCAAGTATGAATGTT;CE=1.96812;RDRATIO=0.782644\tGT:GL:GQ:FT:RCL:RC:RCR:CN:DR:DV:RR:RV\t0/1:-53.8677,0,-44.0684:10000:PASS:3526:4923:4246:1:0:0:15:18\t0/0:0,-2.6295,-102.096:26:PASS:3788:9392:6065:2:0:0:31:2\t0/1:-36.6705,0,-57.2687:10000:PASS:3594:5819:4206:1:0:0:19:13\nchr1\t37742573\tDEL00000087\tT\t<DEL>\t.\tPASS\tPRECISE;SVTYPE=DEL;SVMETHOD=EMBL.DELLYv0.8.1;CHR2=chr1;END=37742737;PE=0;MAPQ=0;CT=3to5;CIPOS=-4,4;CIEND=-4,4;SRMAPQ=60;INSLEN=0;HOMLEN=4;SR=13;SRQ=0.995413;CONSENSUS=ATACCTGCAAGGAAGAAACAGTTCTTTTTCTGCCTCCGAATGGTAAGGATGTGATGTCTGGAGCTGCTGCAGCCACCTTGCTACCATGAGGGAACCAGCCTATGTGATGAGCTTTGAGAGGCATAGATGGGGGTCTTGCTTGAGGCCAGGAGTTAGAGACCAGCCTGGGCAACATAGCAATACTCCGTCTCTACAAAACAATTTAAAAAGAAAAAAAA;CE=1.98394;RDRATIO=0.521555\tGT:GL:GQ:FT:RCL:RC:RCR:CN:DR:DV:RR:RV\t0/1:-54.5723,0,-27.5741:10000:PASS:2041:2232:2064:1:0:0:10:18\t0/0:0,-8.72657,-104.597:87:PASS:2907:5888:2942:2:0:0:29:0\t0/0:0,-8.42527,-100.096:84:PASS:2424:5297:2657:2:0:0:28:0\nchr1\t38757090\tINS00000002\tG\t<INS>\t.\tPASS\tPRECISE;SVTYPE=INS;SVMETHOD=EMBL.DELLYv0.8.1;CHR2=chr1;END=38757091;PE=0;MAPQ=0;CT=NtoN;CIPOS=-5,5;CIEND=-5,5;SRMAPQ=60;INSLEN=57;HOMLEN=4;SR=7;SRQ=0.990654;CONSENSUS=CTCTCAGGATCTACTTGGATGAATCAGCTGGAGCTGGAGCTCCCTCAGGTAGACTGAGACAGGACCAGGGGCATAGCATCCAGAGGATGATCACTGGGATCCTGCCTTGACCCCCTCCCCACCACTGGTGAGGCCCATATGCTTCACAATCAAGCTTGATACTC;CE=1.98904;RDRATIO=1.00036\tGT:GL:GQ:FT:RCL:RC:RCR:CN:DR:DV:RR:RV\t0/0:0,-9.93026,-118.896:99:PASS:21946:44085:22138:2:0:0:33:0\t0/1:-125.746,0,-37.5483:10000:PASS:19396:37774:18368:2:0:0:15:39\t0/1:-112.953,0,-28.9553:10000:PASS:18911:38902:19976:2:0:0:12:35\nchr1\t45517815\tDEL00000093\tA\t<DEL>\t.\tPASS\tPRECISE;SVTYPE=DEL;SVMETHOD=EMBL.DELLYv0.8.1;CHR2=chr1;END=45517912;PE=0;MAPQ=0;CT=3to5;CIPOS=-4,4;CIEND=-4,4;SRMAPQ=60;INSLEN=0;HOMLEN=3;SR=15;SRQ=0.977477;CONSENSUS=GGGTGCTTGCAGTGAGCTGAGATCGCACCACTGCACTCTAGCCTGGGCGACAAAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAACTATGACAACAGATATATACGTGACCCAAACAAACTGAACGAGCAGTGTCACAGCTCCAGAGATTTGAGTGAGCTCTGAGACTTTAAATGTAGAATGTCTCTTATAACAAGAGATAATGAGTATTTCTC;CE=1.9515;RDRATIO=0.489128\tGT:GL:GQ:FT:RCL:RC:RCR:CN:DR:DV:RR:RV\t0/0:0,-2.61756,-67.2225:26:PASS:1337:3114:1437:2:0:0:21:2\t0/1:-28.3803,0,-31.58:10000:PASS:991:1460:1668:1:0:0:11:10\t0/1:-55.9708,0,-29.4728:10000:PASS:1010:1420:1747:1:0:0:11:19\nchr1\t45741614\tDEL00000094\tT\t<DEL>\t.\tPASS\tPRECISE;SVTYPE=DEL;SVMETHOD=EMBL.DELLYv0.8.1;CHR2=chr1;END=45741927;PE=0;MAPQ=0;CT=3to5;CIPOS=-11,11;CIEND=-11,11;SRMAPQ=60;INSLEN=0;HOMLEN=10;SR=14;SRQ=1;CONSENSUS=CCTAACACATTTATGAAAAACTTACAATGAACCAGGTGCAGTATTAATTGCTTTATATGCTAATTTAACCCTTATTATAATCCCATGTGGTAGATATTATTATTTTTCTTATTTTCATATTAAAGAAACAGAATCAAAGTTTAAGTCACTTGTCCACAAGTTGCATGGTAAAGCAAGTTGCAAGGTAGGGGTTGACATCAAAGTCCAT;CE=1.89596;RDRATIO=0.657611\tGT:GL:GQ:FT:RCL:RC:RCR:CN:DR:DV:RR:RV\t0/1:-59.0723,0,-25.1725:10000:PASS:5970:5596:5714:1:0:0:10:19\t0/0:0,-5.02518,-93.8954:50:PASS:6563:10074:7269:1:0:0:28:1\t0/0:0,-5.41501,-61.6965:54:PASS:5163:7603:5362:1:0:0:18:0\nchr1\t51528170\tDEL00000096\tT\t<DEL>\t.\tPASS\tPRECISE;SVTYPE=DEL;SVMETHOD=EMBL.DELLYv0.8.1;CHR2=chr1;END=51528251;PE=0;MAPQ=0;CT=3to5;CIPOS=-4,4;CIEND=-4,4;SRMAPQ=60;INSLEN=0;HOMLEN=4;SR=6;SRQ=0.98125;CONSENSUS=GCAAGACTCTGTCCCAAAAAAAACCAAGAAAGGTAACTCTATTCAGCATTATACTGGAGTATAATTTTCTATATATAGAAAATCCTAAAGAAACAAACAAAAATCTATTGGAATAAATGAGTTCAGCAAAGTTGCAAGATACAACATTAATATACAAAAA;CE=1.8;RDRATIO=0.558423\tGT:GL:GQ:FT:RCL:RC:RCR:CN:DR:DV:RR:RV\t0/1:-38.8765,0,-32.377:10000:PASS:1110:1174:934:1:0:0:11:13\t0/0:0,-7.8227,-90.9959:78:PASS:1364:2497:1270:2:0:0:26:0\t0/0:0,-10.8329,-129.096:108:PASS:1577:3459:1786:2:0:0:36:0\nchr1\t51580899\tDEL00000097\tT\t<DEL>\t.\tPASS\tPRECISE;SVTYPE=DEL;SVMETHOD=EMBL.DELLYv0.8.1;CHR2=chr1;END=51580955;PE=0;MAPQ=0;CT=3to5;CIPOS=-7,7;CIEND=-7,7;SRMAPQ=60;INSLEN=0;HOMLEN=8;SR=11;SRQ=0.994565;CONSENSUS=ACCGCTCAGAGATGACCATTGTTAACATTTTGATATACTGTATTTCCTTCTAGCCATTATATATACTTTTTTGAGACAGAGTCTTGCTCTGTTGCCCAGGCTGGAGTGCAGTGGCATGACCTTTACTCACTGCAACCTTGTCTGTCAGGTTCAGGTGATCCTCCTACCTCAGGCACGTGCCACC;CE=1.97263;RDRATIO=0.349395\tGT:GL:GQ:FT:RCL:RC:RCR:CN:DR:DV:RR:RV\t0/1:-83.9708,0,-1.37347:14:LowQual:618:183:738:0:0:0:3:26\t0/0:0,-1.50399,-16.5988:15:PASS:347:326:497:1:0:0:5:0\t1/1:-40.9973,-3.60971,0:36:PASS:393:33:266:0:0:0:0:12\nchr1\t53128425\tDEL00000099\tT\t<DEL>\t.\tPASS\tPRECISE;SVTYPE=DEL;SVMETHOD=EMBL.DELLYv0.8.1;CHR2=chr1;END=53129277;PE=7;MAPQ=60;CT=3to5;CIPOS=-3,3;CIEND=-3,3;SRMAPQ=60;INSLEN=0;HOMLEN=3;SR=20;SRQ=1;CONSENSUS=AAAATTTAAAAAATTAGCTGGGCATGGTGGCGTGTGCCTGTAGTCCCAGCTAATTGGGAGGCTAAGTCGGGAGGATCGATTGAGCCCTGGAGTTGAAAGTTACAGTGAGCTGTAATAACCTCGTGAAGGAGGTATTCTTCCCACTTTATAGATAAGGACACTGAGGCTCAGATGCTAAAAGGCTTGTTTACATTTGCACATCTAGAGGGTGACTCCAA;CE=1.97572;RDRATIO=0.455621\tGT:GL:GQ:FT:RCL:RC:RCR:CN:DR:DV:RR:RV\t0/0:0,-12.3369,-146.795:123:PASS:53:117:46:2:35:0:41:0\t0/1:-79.0705,0,-6.07396:61:PASS:57:3:15:0:3:10:4:25\t0/1:-58.6676,0,-40.4681:10000:PASS:54:49:37:1:17:4:14:19\nchr1\t54626600\tDEL00000101\tG\t<DEL>\t.\tPASS\tPRECISE;SVTYPE=DEL;SVMETHOD=EMBL.DELLYv0.8.1;CHR2=chr1;END=54630294;PE=31;MAPQ=60;CT=3to5;CIPOS=-3,3;CIEND=-3,3;SRMAPQ=60;INSLEN=0;HOMLEN=3;SR=14;SRQ=1;CONSENSUS=GTCCCCATGTTGCAGGCAAAGAAATCAAGGCTTGGAGAGGTCGAGACTTGTCCCAAGTCACCTCTATGTTAAGTTCAAATGCAGGCAAGCCCCCCACAGTCTGGCCATAAACTGGCCCCAAAACTGGCCATAAGCAAAATCTCTGCAGCACTGTAACATGCCCATAATGGCCCTAATGCCCACGCTG;CE=1.97683;RDRATIO=0.513711\tGT:GL:GQ:FT:RCL:RC:RCR:CN:DR:DV:RR:RV\t0/0:0,-9.93062,-120.197:99:PASS:233:430:228:2:40:0:33:0\t0/1:-38.4737,0,-42.6737:10000:PASS:200:207:232:1:18:15:14:13\t0/1:-41.472,0,-44.6718:10000:PASS:225:194:216:1:19:17:15:14\nchr1\t60822424\tDUP00000106\tA\t<DUP>\t.\tPASS\tPRECISE;SVTYPE=DUP;SVMETHOD=EMBL.DELLYv0.8.1;CHR2=chr1;END=60822663;PE=0;MAPQ=0;CT=5to3;CIPOS=-4,4;CIEND=-4,4;SRMAPQ=60;INSLEN=0;HOMLEN=4;SR=20;SRQ=0.982906;CONSENSUS=TAATTCCCTGAAAATATCAGGTGCATAGTTTGATGTGTCTAATCAAACTTATACAGCACTTAAGTGTGTGTTTCAAAATAAATATTCAATACATATTGATATGATTTATTAATACCTAGTTTTCTTAGGAAAAGAAGGTGAAGCAGTCAGGTGAAGATAGTACCATTTGCTGAGCTAAGCAATACTAGCAAAAGTGGGGACCATGAGTTCATTTGGGAATATTTTAAGTTTGGG;CE=1.89918;RDRATIO=2.07493\tGT:GL:GQ:FT:RCL:RC:RCR:CN:DR:DV:RR:RV\t0/0:0,-9.92903,-116.595:99:PASS:4406:8150:5367:2:0:0:33:0\t0/1:-42.1577,0,-90.5562:10000:PASS:3571:11766:3627:3:0:0:29:16\t0/1:-27.9647,0,-82.8633:10000:PASS:3858:13957:4208:3:0:0:26:11\nchr1\t65558506\tDEL00000116\tT\t<DEL>\t.\tPASS\tIMPRECISE;SVTYPE=DEL;SVMETHOD=EMBL.DELLYv0.8.1;CHR2=chr1;END=65564585;PE=9;MAPQ=60;CT=3to5;CIPOS=-50,50;CIEND=-50,50;RDRATIO=0.684996\tGT:GL:GQ:FT:RCL:RC:RCR:CN:DR:DV:RR:RV\t0/1:-47.6786,0,-53.0784:10000:PASS:378:268:351:1:12:9:0:0\t0/0:0,-8.12712,-127.599:81:PASS:417:322:395:1:27:0:0:0\t0/0:0,-5.71861,-84.699:57:PASS:375:395:361:1:19:0:0:0\nchr1\t65670034\tDEL00000117\tA\t<DEL>\t.\tPASS\tPRECISE;SVTYPE=DEL;SVMETHOD=EMBL.DELLYv0.8.1;CHR2=chr1;END=65670365;PE=0;MAPQ=0;CT=3to5;CIPOS=-4,4;CIEND=-4,4;SRMAPQ=60;INSLEN=0;HOMLEN=6;SR=19;SRQ=0.990654;CONSENSUS=TATATAAAATATTTAACATCATCAAGCAACTATTCATAATTACATTTATAAAAGACTCCACCCAAACAGCAGAATATGCATTTTAAAGGATGCACATAAAACATTAACCAATATGGGCTGTATTCTGAGCCATAAAACAAATTTGAATACATTTAAAAGAATTCAAATCATACAAAGCAAGTTCTTTTTATTCAATGGGATTAAACTACATTC;CE=1.80737;RDRATIO=0.406386\tGT:GL:GQ:FT:RCL:RC:RCR:CN:DR:DV:RR:RV\t0/0:0,-2.41724,-62.5968:24:PASS:5486:9081:6505:2:0:0:19:1\t0/1:-42.3785,0,-21.7795:10000:PASS:5458:3667:6457:1:0:0:8:14\t0/1:-29.981,0,-29.1805:10000:PASS:6648:3423:5413:1:0:0:10:10\nchr1\t66986550\tINV00000057\tT\t<INV>\t.\tPASS\tPRECISE;SVTYPE=INV;SVMETHOD=EMBL.DELLYv0.8.1;CHR2=chr1;END=66986952;PE=27;MAPQ=60;CT=5to5;CIPOS=-6,6;CIEND=-6,6;SRMAPQ=60;INSLEN=0;HOMLEN=6;SR=20;SRQ=0.995327;CONSENSUS=GAAGTCAAGTGTTGCAAAGTGGCTTTTAACACTGTTTGGGAAAAAAAGTTGTTCACATTGGTGAAGGGAAGCAGTCCGAACATATGTTAACAGTAATACTTCATGGGGGTAAGGCCTGAATGCCATTTTCACCTTTTTAAAAAGATGCATTTTATTTGCAGGTTTGTGAAGTTCTTGCAAACTCTTACTACAGAAATGTTTTAAATAAATTCTC;CE=1.92944;RDRATIO=1.24234\tGT:GL:GQ:FT:RCL:RC:RCR:CN:DR:DV:RR:RV\t0/0:0,-9.62923,-114.896:96:PASS:7740:15977:6761:2:35:0:32:0\t0/1:-61.0455,0,-108.244:10000:PASS:8640:27224:11249:3:45:36:35:22\t0/1:-40.058,0,-91.0566:10000:PASS:7245:21086:9018:3:37:16:29:15\nchr1\t69545466\tDEL00000123\tA\t<DEL>\t.\tPASS\tPRECISE;SVTYPE=DEL;SVMETHOD=EMBL.DELLYv0.8.1;CHR2=chr1;END=69546746;PE=22;MAPQ=60;CT=3to5;CIPOS=-7,7;CIEND=-7,7;SRMAPQ=60;INSLEN=0;HOMLEN=6;SR=18;SRQ=1;CONSENSUS=AAAGATAGTTTAAGTCATAGAGGGCTCTGCCTTTCCTGCATGAATTGATGCTGTTATCATGGGAATGAGTTAGTTATCAAGGGAGGGGACTCCTGATAAAAGGATGAGTTTGAACCCCATGAATCTGTAAAATTTAAGAAAATGCATAATTAAGTGTAACTTAAAATTGTTGGTTTTTTTTCAGTAATAACAAAATATCTGGCATGAGGTAGCCCAGGATTGAT;CE=1.91436;RDRATIO=0.501935\tGT:GL:GQ:FT:RCL:RC:RCR:CN:DR:DV:RR:RV\t0/0:0,-6.31861,-73.797:63:PASS:81:159:69:2:22:0:21:0\t0/1:-31.2749,0,-46.2747:10000:PASS:88:83:80:1:18:10:15:11\t0/1:-44.1738,0,-34.4753:10000:PASS:81:83:75:1:16:14:12:15\nchr1\t80328942\tINV00000063\tC\t<INV>\t.\tPASS\tPRECISE;SVTYPE=INV;SVMETHOD=EMBL.DELLYv0.8.1;CHR2=chr1;END=80329422;PE=18;MAPQ=60;CT=5to5;CIPOS=-5,5;CIEND=-5,5;SRMAPQ=60;INSLEN=0;HOMLEN=6;SR=14;SRQ=0.989583;CONSENSUS=TGTTGTTGTTTATTCTTTCACCAATACCACACTACCTTGATTACTGTAGCTCTGTGGTAAGTTTTGACGTATGGTAGTATACACACACACACACACACACACACACACATATATATATTTACATACATAAAACCACTCACTGGATAAAGTTTTTGAAACACATATGAATGAAGGAGATTTACTATCTTAA;CE=1.90209;RDRATIO=2.08528\tGT:GL:GQ:FT:RCL:RC:RCR:CN:DR:DV:RR:RV\t0/0:0,-3.61072,-42.2984:36:PASS:6227:5163:5923:1:13:0:12:0\t0/1:-23.3757,0,-52.1747:10000:PASS:8352:10418:6534:1:16:10:17:9\t0/1:-45.2763,0,-25.2774:10000:PASS:7754:11920:5698:2:9:23:9:15\nchr1\t80956849\tDEL00000134\tT\t<DEL>\t.\tPASS\tIMPRECISE;SVTYPE=DEL;SVMETHOD=EMBL.DELLYv0.8.1;CHR2=chr1;END=80958750;PE=25;MAPQ=60;CT=3to5;CIPOS=-55,55;CIEND=-55,55;RDRATIO=0.559675\tGT:GL:GQ:FT:RCL:RC:RCR:CN:DR:DV:RR:RV\t0/0:0,-4.81647,-96:48:PASS:126:218:88:2:16:0:0:0\t0/1:-67.2701,0,-87.2702:10000:PASS:106:118:111:1:16:13:0:0\t0/1:-64.4743,0,-70.4743:10000:PASS:114:126:107:1:13:12:0:0\nchr1\t81514046\tDEL00000135\tC\t<DEL>\t.\tPASS\tPRECISE;SVTYPE=DEL;SVMETHOD=EMBL.DELLYv0.8.1;CHR2=chr1;END=81514168;PE=0;MAPQ=0;CT=3to5;CIPOS=-2,2;CIEND=-2,2;SRMAPQ=60;INSLEN=0;HOMLEN=2;SR=20;SRQ=1;CONSENSUS=TCTTCTGTGAATCTTCACAACCCAGTGGAGTAAACGGCAGGTGTGAACTGTTGAGACACAGGCTCCCACAATGGAGCATTACTGAGGGTTGGGAAGTAATCCAGTCAAATCAAGCTCTGGAGGCTTAGTTTGTATAGCAATCTCAGTTTTTACCTAGGTGGTATGGTTGTTTTGGATTGCATATTATGTTTGTTTAGAGTATATATTTATT;CE=1.94913;RDRATIO=0.690197\tGT:GL:GQ:FT:RCL:RC:RCR:CN:DR:DV:RR:RV\t0/0:0,-7.52319,-90.7974:75:PASS:2184:3878:2233:2:0:0:25:0\t0/1:-62.9633,0,-48.4637:10000:PASS:2654:2719:1833:1:0:0:17:21\t0/1:-31.8776,0,-36.2778:10000:PASS:1781:1773:1632:1:0:0:12:11\nchr1\t81619563\tDEL00000136\tT\t<DEL>\t.\tPASS\tPRECISE;SVTYPE=DEL;SVMETHOD=EMBL.DELLYv0.8.1;CHR2=chr1;END=81619615;PE=0;MAPQ=0;CT=3to5;CIPOS=-4,4;CIEND=-4,4;SRMAPQ=60;INSLEN=0;HOMLEN=4;SR=14;SRQ=1;CONSENSUS=AGGGATCAATGTAAAATTCCACAAATCAGATGCACTTCTGCTCCCTAACCCCACTGGAAAATTGTCTGAAGTTTTCTTAGTTGCCTCATTTTGTGATCCTCATGAGAGGATGAAATAACATACAGTGATATGTCTTCTAAAAAGATTATTAATTTGTATTATTTCTATAAAT;CE=1.90857;RDRATIO=0.608219\tGT:GL:GQ:FT:RCL:RC:RCR:CN:DR:DV:RR:RV\t0/0:0,-9.62801,-112.895:96:PASS:1022:2103:1123:2:0:0:32:0\t0/1:-66.0602,0,-55.3605:10000:PASS:927:1325:1295:1:0:0:19:22\t0/1:-76.9588,0,-46.66:10000:PASS:1043:1080:870:1:0:0:17:26\nchr1\t84246327\tDEL00000142\tC\t<DEL>\t.\tPASS\tPRECISE;SVTYPE=DEL;SVMETHOD=EMBL.DELLYv0.8.1;CHR2=chr1;END=84250187;PE=26;MAPQ=60;CT=3to5;CIPOS=-4,4;CIEND=-4,4;SRMAPQ=60;INSLEN=0;HOMLEN=4;SR=16;SRQ=0.979592;CONSENSUS=GAATCGTGCTTTTGTACTTCTGGAATTGATAGTGATCAAACACACTCTCCCTAGCAAGTGGCGGACCACACAATGAAAAGTCGTTGTGCACAATAGAAGACTATTGCGTAGCTACCTATACACAAATGAAGACAGATCTTGCAAACTGGAAAGAAATGAATAAACAACTCAAATGCAGCATAGAGAGGTTAAAAG;CE=1.93891;RDRATIO=0.498751\tGT:GL:GQ:FT:RCL:RC:RCR:CN:DR:DV:RR:RV\t0/0:0,-8.72591,-103.296:87:PASS:238:466:238:2:35:0:29:0\t0/1:-31.4744,0,-48.3734:10000:PASS:258:241:243:1:16:11:16:11\t0/1:-49.6734,0,-31.5739:10000:PASS:249:229:220:1:16:15:11:16\nchr1\t85440802\tDEL00000143\tA\t<DEL>\t.\tPASS\tPRECISE;SVTYPE=DEL;SVMETHOD=EMBL.DELLYv0.8.1;CHR2=chr1;END=85440877;PE=0;MAPQ=0;CT=3to5;CIPOS=-4,4;CIEND=-4,4;SRMAPQ=60;INSLEN=0;HOMLEN=3;SR=20;SRQ=1;CONSENSUS=TTTCCAATCCGGGAAGTGGACGTCTGTAATACAACATAAATTACAAAGTTTCTGATTTTACTGTCTAGACACCATCAACCCCCTTAACACTACCTTCTCTGTCAAAAGTCTGGGCAGAGCACATTTGAAGCCAACAAAAAGCAGGATTGGAAAATTAAGAATGGTTAAGAGAGAAAGAGGGCAAGTACAAAACTCACAAATTCACAAGGCTCAATG;CE=1.94132;RDRATIO=0.586758\tGT:GL:GQ:FT:RCL:RC:RCR:CN:DR:DV:RR:RV\t0/0:0,-9.32752,-109.996:93:PASS:1470:2806:1169:2:0:0:31:0\t0/1:-59.2594,0,-65.8592:10000:PASS:1523:1896:1516:1:0:0:22:20\t0/1:-50.6743,0,-28.1748:10000:PASS:847:1060:871:1:0:0:10:16\nchr1\t87820157\tDEL00000146\tA\t<DEL>\t.\tPASS\tPRECISE;SVTYPE=DEL;SVMETHOD=EMBL.DELLYv0.8.1;CHR2=chr1;END=87820312;PE=0;MAPQ=0;CT=3to5;CIPOS=-1,1;CIEND=-1,1;SRMAPQ=60;INSLEN=0;HOMLEN=0;SR=5;SRQ=0.980132;CONSENSUS=AAAGAGAATTTTAAGTTAGAGAGAATAGGATCCCAGGAGTATTTCATTCCTCCTATTTCCACCTAACCCTGTAACCCCTTGCTAGTCAAGGGGTTACATTTATGAGACTGTTCAGTTCTCTGAGGCTGTAGCTGAAAATCAGGAAAGCCTT;CE=1.97676;RDRATIO=0.612373\tGT:GL:GQ:FT:RCL:RC:RCR:CN:DR:DV:RR:RV\t0/1:-25.2791,0,-39.9785:10000:PASS:1729:2299:2149:1:0:0:13:9\t0/0:0,-11.1333,-131.895:111:PASS:3655:6128:2675:2:0:0:37:0\t0/0:0,-8.12459,-96.8968:81:PASS:2154:5058:3382:2:0:0:27:0\nchr1\t89010263\tDEL00000147\tA\t<DEL>\t.\tPASS\tIMPRECISE;SVTYPE=DEL;SVMETHOD=EMBL.DELLYv0.8.1;CHR2=chr1;END=89012891;PE=9;MAPQ=60;CT=3to5;CIPOS=-214,214;CIEND=-214,214;RDRATIO=0.490751\tGT:GL:GQ:FT:RCL:RC:RCR:CN:DR:DV:RR:RV\t0/1:-37.3732,0,-94.1745:10000:PASS:159:161:148:1:17:9:0:0\t0/0:0,-8.72986,-174:87:PASS:172:313:179:2:29:0:0:0\t0/0:0,-10.235,-204:102:PASS:158:327:148:2:34:0:0:0\nchr1\t89345735\tDEL00000148\tA\t<DEL>\t.\tPASS\tIMPRECISE;SVTYPE=DEL;SVMETHOD=EMBL.DELLYv0.8.1;CHR2=chr1;END=89346608;PE=10;MAPQ=60;CT=3to5;CIPOS=-74,74;CIEND=-74,74;RDRATIO=0.549655\tGT:GL:GQ:FT:RCL:RC:RCR:CN:DR:DV:RR:RV\t0/1:-43.6691,0,-116.969:10000:PASS:64:58:50:1:21:9:0:0\t0/0:0,-5.74015,-222:57:PASS:58:112:63:2:38:1:0:0\t0/0:0,-10.536,-210:105:PASS:57:88:51:2:35:0:0:0\nchr1\t91766504\tDEL00000153\tG\t<DEL>\t.\tPASS\tPRECISE;SVTYPE=DEL;SVMETHOD=EMBL.DELLYv0.8.1;CHR2=chr1;END=91767777;PE=26;MAPQ=60;CT=3to5;CIPOS=-3,3;CIEND=-3,3;SRMAPQ=60;INSLEN=0;HOMLEN=3;SR=20;SRQ=1;CONSENSUS=CACATGTATATGTCTTTACCAACAACAGAATGTTAGAATGGCCTGTGCATCAGTACTGTGATGTATCAAACTGCATAATAAAGAGAATCACTAGAGTGATTTTACTCCTGGAAACTATATACAAACTCAGCAAAGTAACTTCTCAATTCTTTCTGGAAGGAGGGATAAATGCATTAATTACTGTTTTGTATTTTCACATTGGATCACAGAAAAAAA;CE=1.91495;RDRATIO=0.443114\tGT:GL:GQ:FT:RCL:RC:RCR:CN:DR:DV:RR:RV\t0/1:-50.0717,0,-37.2724:10000:PASS:70:73:76:1:15:12:13:17\t0/1:-59.7649,0,-48.1652:10000:PASS:78:81:100:1:15:16:17:20\t0/0:0,-8.12457,-96.7968:81:PASS:69:167:79:2:32:0:27:0\nchr1\t92215796\tDEL00000154\tC\t<DEL>\t.\tPASS\tPRECISE;SVTYPE=DEL;SVMETHOD=EMBL.DELLYv0.8.1;CHR2=chr1;END=92215849;PE=0;MAPQ=0;CT=3to5;CIPOS=-2,2;CIEND=-2,2;SRMAPQ=60;INSLEN=0;HOMLEN=1;SR=20;SRQ=1;CONSENSUS=GATATTTGGAATTTGTCAGCACATGGATGATATCTAACACTATGAGTTAAGGAGGACACCAAAGTAACAAATATACCCAGAGAAGAAAAGAGGTCCAAGGACTGAGCTTGCGGCACATAAATGGCCAGTGAGGCTGGAGGGAAACCATGAGAGCATGATATGGGGAAGCCAAGGAAAGAAAGTTTTTCCAGGAGGAGGGAATGATCAACTGTAACAAGTACTG;CE=1.91749;RDRATIO=0.683921\tGT:GL:GQ:FT:RCL:RC:RCR:CN:DR:DV:RR:RV\t0/1:-83.756,0,-50.1567:10000:PASS:1018:1091:1012:1:0:0:18:27\t0/1:-55.7631,0,-57.3636:10000:PASS:998:1282:995:1:0:0:19:19\t0/0:0,-8.12448,-96.6967:81:PASS:851:1724:982:2:0:0:27:0\nchr1\t93822816\tDEL00000157\tC\t<DEL>\t.\tPASS\tPRECISE;SVTYPE=DEL;SVMETHOD=EMBL.DELLYv0.8.1;CHR2=chr1;END=93825701;PE=9;MAPQ=60;CT=3to5;CIPOS=-5,5;CIEND=-5,5;SRMAPQ=60;INSLEN=0;HOMLEN=5;SR=15;SRQ=0.995495;CONSENSUS=GCAGGGACCTGAACATGAAGGGCATTTGATGTCTTGCTACAGAGTTTGATTTTTTTTTTTCCTGAAAGTGAGACAAAGTTATCTGTAACAGACACCTATGCTTACCTACCCAGCCCCCAGGCCATGCGAGCAGAGGAGAGGGTATCATTTAAAGGGCCCGCAGCAGCAAAGAGGCTTTCTCTGCTCTGTCTTTGACCCATCTCTGTTCTGGGTAACTTCACT;CE=1.99561;RDRATIO=0.512278\tGT:GL:GQ:FT:RCL:RC:RCR:CN:DR:DV:RR:RV\t0/0:0,-9.32823,-110.996:93:PASS:187:322:181:2:37:0:31:0\t0/1:-62.2659,0,-42.866:10000:PASS:186:192:192:1:19:9:15:20\t0/0:0,-9.02614,-106.195:90:PASS:177:351:177:2:32:0:30:0\nchr1\t94477682\tDEL00000158\tG\t<DEL>\t.\tPASS\tPRECISE;SVTYPE=DEL;SVMETHOD=EMBL.DELLYv0.8.1;CHR2=chr1;END=94477760;PE=0;MAPQ=0;CT=3to5;CIPOS=-1,1;CIEND=-1,1;SRMAPQ=60;INSLEN=0;HOMLEN=0;SR=11;SRQ=0.97;CONSENSUS=GAGGTGCAAGCAGTGGCTGTTGACTTAAAGTGAATGAACACAATTTGTGTTTCTTGAAAAACATTTCAAACTAATGCAGCTGATGGTGCTTGAACAATCAATGGCTTACTTGATTATTTTGCCATGGAAGTGATAAAGTAATAGAGTCAAACAATATTGGAGCAGGAAAAGCTCCTCACTTTACAGGTGAAGATA;CE=1.93317;RDRATIO=0.747316\tGT:GL:GQ:FT:RCL:RC:RCR:CN:DR:DV:RR:RV\t0/1:-37.3624,0,-80.4607:10000:PASS:1336:2469:1546:2:0:0:26:14\t0/0:0,-11.1328,-130.695:111:PASS:1829:3770:1866:2:0:0:37:0\t0/0:0,-10.5313,-124.095:105:PASS:1631:3595:1505:2:0:0:35:0\nchr1\t96530825\tDEL00000160\tT\t<DEL>\t.\tPASS\tIMPRECISE;SVTYPE=DEL;SVMETHOD=EMBL.DELLYv0.8.1;CHR2=chr1;END=96531660;PE=5;MAPQ=60;CT=3to5;CIPOS=-232,232;CIEND=-232,232;RDRATIO=0.502211\tGT:GL:GQ:FT:RCL:RC:RCR:CN:DR:DV:RR:RV\t0/0:0,-9.63295,-192:96:PASS:54:100:50:2:32:0:0:0\t0/1:-27.8722,0,-117.872:10000:PASS:50:55:52:1:21:6:0:0\t0/0:0,-10.536,-210:105:PASS:48:102:47:2:35:0:0:0\nchr1\t98578712\tDEL00000162\tT\t<DEL>\t.\tPASS\tPRECISE;SVTYPE=DEL;SVMETHOD=EMBL.DELLYv0.8.1;CHR2=chr1;END=98579196;PE=0;MAPQ=0;CT=3to5;CIPOS=-5,5;CIEND=-5,5;SRMAPQ=60;INSLEN=0;HOMLEN=4;SR=9;SRQ=0.983146;CONSENSUS=AAGTGCTGGGATTACAGGTGTGAGCCACCGTGCCTGGCCAAGCACAAGTACTTTTTATATATTCACCTGGCATCCTGCAATATATATGTGATAGGCAGTTTTTTTATTCTCACTCTCCTTCCACCCTCCACCCTCAAGTAGGTGCTGGTGTCTGTTATTCCCTTCTTTGTGTTCA;CE=1.95746;RDRATIO=0.409968\tGT:GL:GQ:FT:RCL:RC:RCR:CN:DR:DV:RR:RV\t0/1:-54.868,0,-43.3685:10000:PASS:9052:8707:10175:1:0:0:15:18\t0/0:0,-11.1334,-132.395:111:PASS:8872:19208:12660:2:0:0:37:0\t0/0:0,-8.42487,-99.396:84:PASS:7966:18427:8716:2:0:0:28:0\nchr1\t106860503\tDEL00000169\tC\t<DEL>\t.\tPASS\tPRECISE;SVTYPE=DEL;SVMETHOD=EMBL.DELLYv0.8.1;CHR2=chr1;END=106862733;PE=11;MAPQ=60;CT=3to5;CIPOS=-7,7;CIEND=-7,7;SRMAPQ=60;INSLEN=0;HOMLEN=11;SR=11;SRQ=1;CONSENSUS=GCCCAGTCAAGGTCCTGAGTTGGATTTTTACAATTTTCTATTTTGGCCTTAAGGAGACTACAGTAGCACCAAGAATCTTGGACCACATAACTATTTTCAAAGGTAGGAAACACTGGGAACACTGCGTTTCCTTTCCTTTATGGAGAATTGGACCAAGACACTTAAAAGTATTAAAAGAAAGAATATTCAGGAAAACTGACAGTAA;CE=1.94907;RDRATIO=0.589782\tGT:GL:GQ:FT:RCL:RC:RCR:CN:DR:DV:RR:RV\t0/0:0,-5.41624,-63.9977:54:PASS:134:248:130:2:28:0:18:0\t0/1:-37.7739,0,-41.674:10000:PASS:155:155:121:1:17:11:14:13\t0/0:0,-7.2216,-85.0969:72:PASS:119:259:153:2:30:0:24:0\nchr1\t107860349\tDEL00000170\tG\t<DEL>\t.\tPASS\tPRECISE;SVTYPE=DEL;SVMETHOD=EMBL.DELLYv0.8.1;CHR2=chr1;END=107862863;PE=13;MAPQ=60;CT=3to5;CIPOS=-5,5;CIEND=-5,5;SRMAPQ=60;INSLEN=0;HOMLEN=4;SR=3;SRQ=1;CONSENSUS=GAGACAGAAATGATAATTTTTCAATAGTAGATATATGAGCGGTGATTTTTAATAGAAATGATAAACCCCAAATTTCTAAGTGTTCTACCA;CE=1.85781;RDRATIO=0.466163\tGT:GL:GQ:FT:RCL:RC:RCR:CN:DR:DV:RR:RV\t0/1:-12.2822,0,-44.281:123:PASS:159:163:157:1:16:14:14:5\t0/0:0,-10.5314,-125.195:105:PASS:145:341:172:2:41:0:35:0\t0/0:0,-9.32832,-111.496:93:PASS:146:322:145:2:33:0:31:0\nchr1\t109030609\tDEL00000172\tC\t<DEL>\t.\tPASS\tPRECISE;SVTYPE=DEL;SVMETHOD=EMBL.DELLYv0.8.1;CHR2=chr1;END=109032559;PE=6;MAPQ=60;CT=3to5;CIPOS=-3,3;CIEND=-3,3;SRMAPQ=60;INSLEN=0;HOMLEN=2;SR=8;SRQ=1;CONSENSUS=CACAGTCATTATAAACCTTATAGTTATGACAAAAGTGCTTAATAAAGGCTCCATTAATCTGCAATTCCATCTCACACAATAAAAACTGCTCTCTTTAATCTGCAGAAAAGGTAAAGAAAAAAAATTGTCAACTTTGACACTAAAAATGTAAAATGTAGACCAGGCATGGTGGCTCACACCTGTAATCCCA;CE=1.89777;RDRATIO=0.392587\tGT:GL:GQ:FT:RCL:RC:RCR:CN:DR:DV:RR:RV\t0/1:-42.9763,0,-29.177:10000:PASS:116:112:109:1:15:6:10:14\t0/0:0,-7.52253,-89.0968:75:PASS:100:265:109:3:24:0:25:0\t0/0:0,-6.01601,-69.9954:60:PASS:112:233:108:2:28:0:20:0\nchr1\t115686862\tDEL00000181\tG\t<DEL>\t.\tPASS\tPRECISE;SVTYPE=DEL;SVMETHOD=EMBL.DELLYv0.8.1;CHR2=chr1;END=115690220;PE=7;MAPQ=60;CT=3to5;CIPOS=-5,5;CIEND=-5,5;SRMAPQ=60;INSLEN=0;HOMLEN=7;SR=4;SRQ=0.993289;CONSENSUS=TACCAATAGTAATAATAGCAATTTAGTCTGGCCTCTTCATATGACAGGTACTGTTTTAAGCACATCACGTGAATTAACTCTTTCAGTTCCTCTACACTTGTTTACTGTTGAAAGTAAAGGGTCACACGAGAGTCAGTGATTACAGGAGC;CE=1.95953;RDRATIO=0.4955\tGT:GL:GQ:FT:RCL:RC:RCR:CN:DR:DV:RR:RV\t0/0:0,-8.1251,-98.2973:81:PASS:197:403:192:2:35:0:27:0\t0/1:-22.6816,0,-34.1815:10000:PASS:223:231:227:1:17:7:11:8\t0/0:0,-8.42468,-99.1958:84:PASS:217:395:229:2:38:0:28:0\nchr1\t116459540\tDEL00000183\tT\t<DEL>\t.\tPASS\tPRECISE;SVTYPE=DEL;SVMETHOD=EMBL.DELLYv0.8.1;CHR2=chr1;END=116459671;PE=0;MAPQ=0;CT=3to5;CIPOS=-4,4;CIEND=-4,4;SRMAPQ=60;INSLEN=0;HOMLEN=3;SR=14;SRQ=1;CONSENSUS=TAGAAGTAGAATGGTGGTTGTTGGGGCTGGGAGAGGAGAAAATGGGGAGTTTTTTTTAACAGGTATGGAGTTTTGGATTGGGAAGATGAAAAAGTTTGGAGTTTGGCTCTGTCACCCAGGTTGCAGTGCAGTGGTGTGATCTCGGCTCACTGCAACCTCTGCCTCCTGAGTTCAAGCGATTCTCCTGCCTTAGGCTCCTGAGTAGCTG;CE=1.94901;RDRATIO=0.652546\tGT:GL:GQ:FT:RCL:RC:RCR:CN:DR:DV:RR:RV\t0/1:-16.8838,0,-34.0831:10000:PASS:1275:1968:1695:1:0:0:11:6\t0/0:0,-12.0356,-141.394:120:PASS:3109:6376:3170:2:0:0:40:0\t0/1:-37.4732,0,-44.4732:10000:PASS:2289:2587:1680:1:0:0:15:13\nchr1\t118731590\tDEL00000185\tA\t<DEL>\t.\tPASS\tPRECISE;SVTYPE=DEL;SVMETHOD=EMBL.DELLYv0.8.1;CHR2=chr1;END=118731647;PE=0;MAPQ=0;CT=3to5;CIPOS=-5,5;CIEND=-5,5;SRMAPQ=60;INSLEN=0;HOMLEN=5;SR=19;SRQ=1;CONSENSUS=TATTTTATAGCTAAAATATTACTAAATACTAGTATATTTATATTATTTTATATATAGTATGTAATATATAACTATAATATTAAATAAATTTATATATAATACATAATATATAACTATTAATTATATTAAATATAGTATATAACTCTATAATATTAAATATAATATACCATATATAATTTATACTATATGTAATATATATTATATATATAGTATTACTAGTATA;CE=1.43267;RDRATIO=0.559903\tGT:GL:GQ:FT:RCL:RC:RCR:CN:DR:DV:RR:RV\t0/0:0,-6.3191,-75.4975:63:PASS:771:1591:645:2:0:0:21:0\t0/1:-33.3786,0,-32.8785:10000:PASS:677:729:627:1:0:0:11:11\t0/1:-46.7762,0,-25.677:10000:PASS:553:748:636:1:0:0:9:15\nchr1\t121754939\tDUP00000129\tA\t<DUP>\t.\tPASS\tIMPRECISE;SVTYPE=DUP;SVMETHOD=EMBL.DELLYv0.8.1;CHR2=chr1;END=121755464;PE=6;MAPQ=29;CT=5to3;CIPOS=-295,295;CIEND=-295,295;RDRATIO=3.05747\tGT:GL:GQ:FT:RCL:RC:RCR:CN:DR:DV:RR:RV\t0/0:0,-3.5647,-58.5627:36:PASS:7:290:3:58:22:6:0:0\t0/1:-2.93902,0,-10.1982:29:PASS:0:133:2:133:6:6:0:0\t0/1:-13.2226,0,-61.8668:132:PASS:2:266:1:177:30:19:0:0\nchr1\t121764691\tDUP00000132\tA\t<DUP>\t.\tPASS\tIMPRECISE;SVTYPE=DUP;SVMETHOD=EMBL.DELLYv0.8.1;CHR2=chr1;END=121765191;PE=8;MAPQ=25;CT=5to3;CIPOS=-303,303;CIEND=-303,303;RDRATIO=2.77588\tGT:GL:GQ:FT:RCL:RC:RCR:CN:DR:DV:RR:RV\t0/1:-23.8516,0,-29.1404:10000:PASS:2066:62180:5266:17:24:29:0:0\t0/0:0,-11.8341,-221.135:118:PASS:37001:77278:5054:4:92:14:0:0\t0/0:0,-2.55375,-125.196:26:PASS:10163:62361:10249:6:47:11:0:0\nchr1\t143202455\tDUP00000149\tC\t<DUP>\t.\tPASS\tIMPRECISE;SVTYPE=DUP;SVMETHOD=EMBL.DELLYv0.8.1;CHR2=chr1;END=143202905;PE=18;MAPQ=20;CT=5to3;CIPOS=-369,369;CIEND=-369,369;RDRATIO=1.40928\tGT:GL:GQ:FT:RCL:RC:RCR:CN:DR:DV:RR:RV\t0/1:-14.5151,0,-140.399:145:PASS:23973:1886288:4367:133:108:62:0:0\t0/1:-13.5012,0,-211.223:135:PASS:34458:1996026:6665:97:127:55:0:0\t0/0:0,-16.8272,-312.924:10000:PASS:35894:2098542:8539:94:183:50:0:0\nchr1\t143252719\tDUP00000166\tT\t<DUP>\t.\tPASS\tIMPRECISE;SVTYPE=DUP;SVMETHOD=EMBL.DELLYv0.8.1;CHR2=chr1;END=143253308;PE=80;MAPQ=22;CT=5to3;CIPOS=-199,199;CIEND=-199,199;RDRATIO=1.49007\tGT:GL:GQ:FT:RCL:RC:RCR:CN:DR:DV:RR:RV\t0/1:-39.4562,0,-659.769:10000:PASS:34:8308:455:34:368:97:0:0\t0/0:0,-23.8619,-697.208:10000:PASS:86:6898:578:21:409:71:0:0\t0/0:0,-40.5863,-884.002:10000:PASS:85:8084:624:23:473:76:0:0\nchr1\t157917497\tINV00000097\tG\t<INV>\t.\tPASS\tIMPRECISE;SVTYPE=INV;SVMETHOD=EMBL.DELLYv0.8.1;CHR2=chr1;END=157918101;PE=12;MAPQ=60;CT=3to3;CIPOS=-240,240;CIEND=-240,240;RDRATIO=1.1283\tGT:GL:GQ:FT:RCL:RC:RCR:CN:DR:DV:RR:RV\t0/1:-26.1712,0,-123.571:10000:PASS:32:50:34:2:22:6:0:0\t0/1:-25.8702,0,-126.87:10000:PASS:35:45:40:1:23:6:0:0\t0/0:0,-9.63295,-192:96:PASS:29:47:41:1:32:0:0:0\nchr1\t157917619\tINV00000098\tT\t<INV>\t.\tPASS\tIMPRECISE;SVTYPE=INV;SVMETHOD=EMBL.DELLYv0.8.1;CHR2=chr1;END=157917800;PE=7;MAPQ=54;CT=5to5;CIPOS=-422,422;CIEND=-422,422;RDRATIO=1.46357\tGT:GL:GQ:FT:RCL:RC:RCR:CN:DR:DV:RR:RV\t0/1:-46.6784,0,-58.1785:10000:PASS:1471:3317:2853:2:11:10:0:0\t0/1:-15.6866,0,-50.0866:157:PASS:929:3626:2206:2:9:4:0:0\t0/0:0,-5.1175,-102:51:PASS:2481:3689:2187:2:17:0:0:0\nchr1\t158757031\tDEL00000213\tC\t<DEL>\t.\tPASS\tIMPRECISE;SVTYPE=DEL;SVMETHOD=EMBL.DELLYv0.8.1;CHR2=chr1;END=158758203;PE=9;MAPQ=60;CT=3to5;CIPOS=-50,50;CIEND=-50,50;RDRATIO=0.492956\tGT:GL:GQ:FT:RCL:RC:RCR:CN:DR:DV:RR:RV\t0/0:0,-5.93604,-199.4:59:PASS:65:133:81:2:34:1:0:0\t0/1:-75.5598,0,-132.26:10000:PASS:74:89:77:1:24:15:0:0\t0/0:0,-11.1381,-222:111:PASS:60:165:78:2:37:0:0:0\nchr1\t158991561\tDEL00000215\tC\t<DEL>\t.\tPASS\tPRECISE;SVTYPE=DEL;SVMETHOD=EMBL.DELLYv0.8.1;CHR2=chr1;END=158996412;PE=20;MAPQ=60;CT=3to5;CIPOS=-5,5;CIEND=-5,5;SRMAPQ=60;INSLEN=0;HOMLEN=6;SR=18;SRQ=0.994845;CONSENSUS=TCAAGTCTTATGTGGTCTCCACCTTTCTGAGTTTTTAAGAATAACAGCAGAGGTTGCAGTAAGCCGAGATGGTGCCACTGCACTCCAGCTTGGGTGACAGAGTGAGACTCTGCATGGTTGTCCTTTCTACCAGGTACCGTCTTACCCAAACCACACTTTCAATTTCCCCAGCCTGCCCTGAGGGCACAGACCTG;CE=1.99364;RDRATIO=0.469996\tGT:GL:GQ:FT:RCL:RC:RCR:CN:DR:DV:RR:RV\t0/1:-83.5563,0,-52.4556:10000:PASS:316:316:307:1:18:20:19:27\t0/0:0,-7.5213,-87.2955:75:PASS:289:654:317:2:26:0:25:0\t0/0:0,-7.22165,-85.4969:72:PASS:320:587:317:2:35:0:24:0\nchr1\t159678917\tDEL00000216\tA\t<DEL>\t.\tPASS\tPRECISE;SVTYPE=DEL;SVMETHOD=EMBL.DELLYv0.8.1;CHR2=chr1;END=159679868;PE=13;MAPQ=60;CT=3to5;CIPOS=-2,2;CIEND=-2,2;SRMAPQ=60;INSLEN=0;HOMLEN=1;SR=15;SRQ=1;CONSENSUS=ATACATGTGTATTATATGTCATACATATACATATATGTACCAGAACATTTATATCATGAAAGCATAGCCATATGTTTATATGAGTCCTCTCTTGCTAGACTGAGGGCTATCGAATTAAAATAAAACCTATCCAGGGTGCAATTTTGACTAGCAATACATAAAATGTCACAACAAACATAACGTTTCCTGGAGTACCTTTGATACTCTAGG;CE=1.91496;RDRATIO=0.373349\tGT:GL:GQ:FT:RCL:RC:RCR:CN:DR:DV:RR:RV\t0/0:0,-1.9239,-81.7971:19:PASS:50:117:43:3:30:1:25:2\t0/1:-44.8751,0,-30.3755:10000:PASS:72:62:60:1:13:12:11:15\t0/0:0,-8.42514,-99.2963:84:PASS:57:105:50:2:34:0:28:0\nchr1\t165185579\tINV00000100\tA\t<INV>\t.\tPASS\tIMPRECISE;SVTYPE=INV;SVMETHOD=EMBL.DELLYv0.8.1;CHR2=chr1;END=211535074;PE=4;MAPQ=31;CT=3to3;CIPOS=-494,494;CIEND=-494,494;RDRATIO=0.994123\tGT:GL:GQ:FT:RCL:RC:RCR:CN:DR:DV:RR:RV\t0/1:-7.47941,0,-84.0167:75:PASS:2696825:5609685:0:4:15:5:0:0\t0/0:0,-5.41852,-106.5:54:PASS:2900444:6068904:0:4:18:0:0:0\t0/0:0,-6.32162,-125.9:63:PASS:2697807:5640468:0:4:21:0:0:0\nchr1\t167102932\tDEL00000226\tA\t<DEL>\t.\tPASS\tPRECISE;SVTYPE=DEL;SVMETHOD=EMBL.DELLYv0.8.1;CHR2=chr1;END=167102996;PE=0;MAPQ=0;CT=3to5;CIPOS=-4,4;CIEND=-4,4;SRMAPQ=60;INSLEN=0;HOMLEN=4;SR=13;SRQ=0.994792;CONSENSUS=CAAGTCAGCAAATACCTCACCACCGGACTCTTAGTCCTTGTACTAGTTTCCTAGGGCTGCCACAGCAAATTACTGAAATCAAGCTGGTGACAGAGCCACACAGCCTCCAAAGACTCTAGGGAAGACTCCTTCCTTGTCTCTTGCTCGTTTCTGTTGGCTCGGGCGTTTCTTGCATTGTGGCAGCATAATTC;CE=1.98876;RDRATIO=0.589167\tGT:GL:GQ:FT:RCL:RC:RCR:CN:DR:DV:RR:RV\t0/0:0,-7.82373,-93.3969:78:PASS:1015:2094:1229:2:0:0:26:0\t0/1:-53.9669,0,-46.8672:10000:PASS:892:1253:1263:1:0:0:16:18\t0/0:0,-9.3287,-112.497:93:PASS:1368:2558:1224:2:0:0:31:0\nchr1\t169038512\tDEL00000230\tG\t<DEL>\t.\tPASS\tPRECISE;SVTYPE=DEL;SVMETHOD=EMBL.DELLYv0.8.1;CHR2=chr1;END=169038612;PE=0;MAPQ=0;CT=3to5;CIPOS=-6,6;CIEND=-6,6;SRMAPQ=60;INSLEN=0;HOMLEN=5;SR=14;SRQ=1;CONSENSUS=ACTGTAAAAAGAGTCAAAGAAGGTCATTGTATAATGATAAAGGGATCAATTCAGCAAGTGGATAAAACAATTAAAATATCTGTGCACTCTCAGTAATGGCCATATCATCCAGACAGAAAATCAACAAACACTCGATTTAAACTACACACTAGATCTAATCAGCCTAACCGACATTTATAGATCATTTAAC;CE=1.8787;RDRATIO=0.451845\tGT:GL:GQ:FT:RCL:RC:RCR:CN:DR:DV:RR:RV\t0/1:-39.6784,0,-25.5789:10000:PASS:1364:1271:1188:1:0:0:9:13\t0/0:0,-6.03979,-141.296:60:PASS:2300:5024:2258:2:0:0:41:2\t0/0:0,-8.12455,-96.3967:81:PASS:2113:3094:1579:2:0:0:27:0\nchr1\t171936868\tINS00000009\tA\t<INS>\t.\tPASS\tPRECISE;SVTYPE=INS;SVMETHOD=EMBL.DELLYv0.8.1;CHR2=chr1;END=171936869;PE=0;MAPQ=0;CT=NtoN;CIPOS=-3,3;CIEND=-3,3;SRMAPQ=60;INSLEN=60;HOMLEN=3;SR=5;SRQ=1;CONSENSUS=GATACCCAGTAACAGAAATCAGAAAACTTGTTTGGAGGCACCAAGTAAGCAATGAGGTAATGTGGAGACACAAAGTTCAGGCAGCAGGTCTGAGAAGAAAGGCTTGAGAAGGTGGTGAATCATCACATTCTGGGAGAGGGGCTCCACAATG;CE=1.93102;RDRATIO=0.999847\tGT:GL:GQ:FT:RCL:RC:RCR:CN:DR:DV:RR:RV\t0/0:0,-9.62914,-114.496:96:PASS:22170:39712:17545:2:0:0:32:0\t0/1:-104.853,0,-35.5552:10000:PASS:23100:43705:20615:2:0:0:14:33\t0/0:0,-7.52248,-89.3967:75:PASS:18260:38353:20114:2:0:0:25:0\nchr1\t174827418\tDEL00000235\tA\t<DEL>\t.\tPASS\tPRECISE;SVTYPE=DEL;SVMETHOD=EMBL.DELLYv0.8.1;CHR2=chr1;END=174832707;PE=16;MAPQ=60;CT=3to5;CIPOS=-5,5;CIEND=-5,5;SRMAPQ=60;INSLEN=0;HOMLEN=5;SR=14;SRQ=1;CONSENSUS=CTCTAATCTCTTTTTATAAGGACACCAGTCATATTGGATTAGAGCCCACCCTAAGGACCCATTTTAACTTAATTGTCTCTTTAAAGGCCTTATCTCCCAATACAGATACTGGCTGTCTCTGTGTGTTCATGACTTTTGCTGGCACATCTGTAGCCCCAGGTCCCTTTCTCCAGCTTGCCACTCCTACATATTTTTCCCTTATGATTCTATGCTGTT;CE=1.92545;RDRATIO=0.502304\tGT:GL:GQ:FT:RCL:RC:RCR:CN:DR:DV:RR:RV\t0/0:0,-3.22872,-98.5977:32:PASS:335:627:287:2:35:1:29:2\t0/1:-43.368,0,-55.168:10000:PASS:364:365:329:1:24:16:18:15\t0/0:0,-9.02714,-106.796:90:PASS:336:691:323:2:40:0:30:0\nchr1\t179360614\tDEL00000238\tC\t<DEL>\t.\tPASS\tIMPRECISE;SVTYPE=DEL;SVMETHOD=EMBL.DELLYv0.8.1;CHR2=chr1;END=179364626;PE=19;MAPQ=60;CT=3to5;CIPOS=-64,64;CIEND=-64,64;RDRATIO=0.528324\tGT:GL:GQ:FT:RCL:RC:RCR:CN:DR:DV:RR:RV\t0/1:-53.8722,0,-81.8777:10000:PASS:239:230:231:1:15:12:0:0\t0/0:0,-8.72986,-173.4:87:PASS:274:498:239:2:29:0:0:0\t0/1:-35.7784,0,-71.7067:10000:PASS:234:239:232:1:13:8:0:0\nchr1\t179638157\tDEL00000240\tA\t<DEL>\t.\tPASS\tPRECISE;SVTYPE=DEL;SVMETHOD=EMBL.DELLYv0.8.1;CHR2=chr1;END=179638925;PE=20;MAPQ=60;CT=3to5;CIPOS=-2,2;CIEND=-2,2;SRMAPQ=60;INSLEN=0;HOMLEN=1;SR=20;SRQ=0.990868;CONSENSUS=AACAATAAGGAAGTGACGTTAGCACCAGGTGAGGTTGCAGGAGTCAGGAAGGGGGAGAGAGTGACTGATGTGATGCTGGAAGACTAAGAAAAAGCTAGATTCTGAATACCATGGGTAAATACCCAGTTAAAATTTGGGGGACTCTGTTGCTAGAGAAAAGGGAAAGAGGAGAATGGGCATTGAGGAACAACTGGCATGTCTTCCATATAGTTGGAAAT;CE=1.90215;RDRATIO=0.471698\tGT:GL:GQ:FT:RCL:RC:RCR:CN:DR:DV:RR:RV\t0/1:-56.6661,0,-46.1666:10000:PASS:39:41:47:1:16:11:16:19\t0/0:0,-9.62872,-113.496:96:PASS:53:106:47:2:37:0:32:0\t0/1:-60.9705,0,-26.0722:10000:PASS:47:48:49:1:12:10:10:20\nchr1\t185040669\tDEL00000245\tA\t<DEL>\t.\tPASS\tPRECISE;SVTYPE=DEL;SVMETHOD=EMBL.DELLYv0.8.1;CHR2=chr1;END=185042602;PE=28;MAPQ=60;CT=3to5;CIPOS=-9,9;CIEND=-9,9;SRMAPQ=60;INSLEN=0;HOMLEN=9;SR=20;SRQ=1;CONSENSUS=TGAAAAGGTCGTAAATCTCAAGTTGCCTGCTTCCTGGAGCCACCCTGAATTATAGGTCTCTCTAGGCCTTTCTACAATGTCCCCACTTAACTTGGCTCTTTCAAAGAAAGCACAACACATTTAACATGCAGATAGAGTGTTACTAGAAAATGTTTTTTAGAACGATATCTGTTATGTCAGGTCAAAACATTAGCAAAAATAATGTGGTCTGGATATGTGAATCACTA;CE=1.95643;RDRATIO=0.682219\tGT:GL:GQ:FT:RCL:RC:RCR:CN:DR:DV:RR:RV\t0/0:0,-9.32716,-108.895:93:PASS:132:217:125:2:37:0:31:0\t0/1:-34.5723,0,-54.1703:10000:PASS:136:131:116:1:21:15:18:12\t0/1:-42.4735,0,-39.2738:10000:PASS:116:125:101:1:12:13:13:14\nchr1\t185814580\tDEL00000248\tG\t<DEL>\t.\tPASS\tPRECISE;SVTYPE=DEL;SVMETHOD=EMBL.DELLYv0.8.1;CHR2=chr1;END=185816166;PE=15;MAPQ=60;CT=3to5;CIPOS=-3,3;CIEND=-3,3;SRMAPQ=60;INSLEN=0;HOMLEN=2;SR=16;SRQ=0.995495;CONSENSUS=GAATATCTGCTTTCATGCTTCTTTTCTTACTAAAACAATAACTTAACCTAGTCAGTAGAAAATAAATTTCATGTTTGGTGATATTTAGTCAGTTGGCCACTGGGGAGAATGGAAGATTGAGGGACTCAAAGGAAGAACAAATTATAGGCAGTTACTGACACAGATCCATCAATCCATGTGCTAAGCTGACTTTGTAAAATGGCCAGTGATATCTCCTTTTAC;CE=1.94544;RDRATIO=0.492509\tGT:GL:GQ:FT:RCL:RC:RCR:CN:DR:DV:RR:RV\t0/0:0,-6.91957,-80.9959:69:PASS:85:167:102:2:29:0:23:0\t0/1:-67.7581,0,-61.058:10000:PASS:120:106:121:1:21:15:21:23\t0/0:0,-12.3372,-146.895:123:PASS:114:187:107:2:45:0:41:0\nchr1\t186200437\tDEL00000249\tA\t<DEL>\t.\tPASS\tPRECISE;SVTYPE=DEL;SVMETHOD=EMBL.DELLYv0.8.1;CHR2=chr1;END=186200504;PE=0;MAPQ=0;CT=3to5;CIPOS=-1,1;CIEND=-1,1;SRMAPQ=60;INSLEN=0;HOMLEN=0;SR=11;SRQ=0.995146;CONSENSUS=AAGGCATGAACCCAGGAGGCGGAGCTTGCAGTGAGCTGAGATTACGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTGTCTCCAAAAAAAAAATGGGGGGGACTGAGTCTCACTCTGTTGCCCAGGCTGGACTGCATTGGCATGATCTCGGCTCACCACAACCTCTGCCTCCCAGGTTCAAGTGATTCTCCTGCCTCAGCCT;CE=1.98395;RDRATIO=0.600463\tGT:GL:GQ:FT:RCL:RC:RCR:CN:DR:DV:RR:RV\t0/0:0,-4.51251,-51.9971:45:PASS:526:1542:866:2:0:0:15:0\t0/1:-38.8797,0,-21.5804:10000:PASS:776:888:559:1:0:0:8:13\t0/1:-14.9913,0,-11.3914:114:PASS:371:334:446:1:0:0:4:5\nchr1\t187746973\tDEL00000253\tA\t<DEL>\t.\tPASS\tPRECISE;SVTYPE=DEL;SVMETHOD=EMBL.DELLYv0.8.1;CHR2=chr1;END=187753402;PE=23;MAPQ=60;CT=3to5;CIPOS=-3,3;CIEND=-3,3;SRMAPQ=60;INSLEN=0;HOMLEN=2;SR=14;SRQ=1;CONSENSUS=TTTAGTTGAGTATTAACTTTATAACTAAGCAATCTTATATGGCCTGTAGACTGAGTCCAGTAAGAAAGGTGAAAGTTCTGTTCAGTGCTTCACTCAAGAAAAGTTGCATGAGAAAAACATAAAACTTCAAAAATCTTGATATCTGATGAAGAAATCACAAAAGATTAAAATTGATAAATAATCTATTGGTATATTAGAGTATGTTAAATAATTATT;CE=1.8329;RDRATIO=0.523278\tGT:GL:GQ:FT:RCL:RC:RCR:CN:DR:DV:RR:RV\t0/1:-30.6736,0,-54.8715:10000:PASS:383:399:379:1:19:12:18:11\t0/0:0,-5.02669,-96.9969:50:PASS:378:812:414:2:38:0:28:1\t0/1:-20.9798,0,-40.4807:10000:PASS:394:419:387:1:16:11:13:8\nchr1\t189115830\tDEL00000255\tT\t<DEL>\t.\tPASS\tPRECISE;SVTYPE=DEL;SVMETHOD=EMBL.DELLYv0.8.1;CHR2=chr1;END=189116102;PE=0;MAPQ=0;CT=3to5;CIPOS=-6,6;CIEND=-6,6;SRMAPQ=60;INSLEN=0;HOMLEN=5;SR=20;SRQ=0.991071;CONSENSUS=CATAACTATATTTTCTCATACTTACCTATAATTATCTTTACTGGCATTCTCTGCTTGTGTGTATTCTAATTACTTTATACTGTTGTTTGCTTCTAGCCTAAAGAACTTTCTTTACCACTTCTTCTAACATTGCATTCTTGAGTGTTTCTTTATGTGGTAATGTCCTTATTTCAGTTTAATTTTTGAAAGATAATTTTTCCGGACATAAAATTCAACATTGAGCA;CE=1.82502;RDRATIO=0.721129\tGT:GL:GQ:FT:RCL:RC:RCR:CN:DR:DV:RR:RV\t0/0:0,-2.51794,-63.1975:25:PASS:3955:7245:4432:2:0:0:19:1\t0/1:-49.1768,0,-20.7777:10000:PASS:4304:2367:4505:1:0:0:8:16\t0/1:-46.4744,0,-32.0749:10000:PASS:3834:3889:2409:1:0:0:11:15\nchr1\t189274836\tDEL00000256\tA\t<DEL>\t.\tPASS\tPRECISE;SVTYPE=DEL;SVMETHOD=EMBL.DELLYv0.8.1;CHR2=chr1;END=189277763;PE=23;MAPQ=60;CT=3to5;CIPOS=-3,3;CIEND=-3,3;SRMAPQ=60;INSLEN=0;HOMLEN=3;SR=20;SRQ=1;CONSENSUS=ACTAAAGCATGAATTTAATAAATCCAGAAATAATAGTAATGAAATTATTCTTTACCTTTAATATTATCTTTATTTATAAAGTTATTATATGCAATATATATATTTACAGTACACCAATAATATTCATATAATTAGGTTTAAAAATTGTGTTTTTCTAATTCGTAGGATGCAAATAAACATTAGTCCTTCTGTTACTGGACTAATGTGTTACTGAATGAAATTAATTTTTTA;CE=1.73641;RDRATIO=0.52119\tGT:GL:GQ:FT:RCL:RC:RCR:CN:DR:DV:RR:RV\t0/0:0,-6.31897,-74.7973:63:PASS:190:374:155:2:19:0:21:0\t0/1:-46.3671,0,-55.3659:10000:PASS:223:226:177:1:18:9:19:16\t0/1:-71.5625,0,-42.6635:10000:PASS:198:162:169:1:11:14:15:23\nchr1\t189561064\tDEL00000257\tG\t<DEL>\t.\tPASS\tPRECISE;SVTYPE=DEL;SVMETHOD=EMBL.DELLYv0.8.1;CHR2=chr1;END=189561633;PE=2;MAPQ=60;CT=3to5;CIPOS=-4,4;CIEND=-4,4;SRMAPQ=60;INSLEN=0;HOMLEN=3;SR=20;SRQ=1;CONSENSUS=TTCACTTCTCAGAATCAACATAAATGCCCATCAATATTAGATTGAGTAAAGAAAATGTGGTACATTGTGCACTATGAAATATTTTGCAGCCATAACAAAGAATTAGGTCTTTAAATAATTAATTTGCACTGATATATTACTATTATCACACCTAAATATTTAATCTTTTATAAAGGTATTATTTTTACATAGGCTATACAATTTTAAGTTAGTCA;CE=1.81875;RDRATIO=0.511689\tGT:GL:GQ:FT:RCL:RC:RCR:CN:DR:DV:RR:RV\t0/0:0,-6.92115,-82.9975:69:PASS:27:78:32:3:29:0:23:0\t0/1:-20.7794,0,-42.5788:10000:PASS:35:41:29:1:17:0:14:8\t0/1:-46.0676,0,-52.8675:10000:PASS:36:46:32:1:20:3:18:16\nchr1\t189884210\tDEL00000258\tT\t<DEL>\t.\tPASS\tPRECISE;SVTYPE=DEL;SVMETHOD=EMBL.DELLYv0.8.1;CHR2=chr1;END=189884989;PE=9;MAPQ=60;CT=3to5;CIPOS=-1,1;CIEND=-1,1;SRMAPQ=60;INSLEN=0;HOMLEN=0;SR=11;SRQ=1;CONSENSUS=ATTTTATTTTTATGTTATTTTTCTCACATTTTCAGTTCTAGTTTTTATGTCTTTAAACATCATTAAAGCCTTTTTTCTGCTATTTCAATTATCACAATTAAGAAGCTATCAACAGAGAAAACAGAAAACCTACAGAATGAGAGAAAATATTTGCAAATTATGCATCTGACAAAGGTTTCATATTCAGAATCTA;CE=1.81925;RDRATIO=0.425926\tGT:GL:GQ:FT:RCL:RC:RCR:CN:DR:DV:RR:RV\t0/0:0,-8.42535,-99.7965:84:PASS:62:98:47:2:29:0:28:0\t0/1:-48.7646,0,-59.7643:10000:PASS:54:57:54:1:21:10:20:17\t0/0:0,-11.1326,-130.794:111:PASS:47:114:45:2:31:0:37:0\nchr1\t192640668\tDEL00000260\tG\t<DEL>\t.\tPASS\tPRECISE;SVTYPE=DEL;SVMETHOD=EMBL.DELLYv0.8.1;CHR2=chr1;END=192640735;PE=0;MAPQ=0;CT=3to5;CIPOS=-4,4;CIEND=-4,4;SRMAPQ=60;INSLEN=0;HOMLEN=5;SR=20;SRQ=0.995798;CONSENSUS=TTTGCTTAAGTATTGTGAATCTCTATTTGCAATCGGAAGAGTCCTAATAAGTGAATTAATCTATTCCCCTTCCATTTTCTTCCTTCCTATAGATATAAATAACTTTATTGCTTCTTGGTCTTATCTCCAAACCTGCAAATGAACTTGAATCTATACCTATATTTTCACTAGTTACAAGAGAATAGTAACTATTTCCTGTATTTTCACTTCTCCAATATCTTAACTCCTACATTCTGAA;CE=1.8534;RDRATIO=0.653398\tGT:GL:GQ:FT:RCL:RC:RCR:CN:DR:DV:RR:RV\t0/1:-39.8693,0,-54.6693:10000:PASS:1286:1413:930:1:0:0:18:14\t0/0:0,-10.8327,-128.696:108:PASS:1564:2953:1462:2:0:0:36:0\t0/1:-57.4666,0,-44.0674:10000:PASS:911:1416:1326:1:0:0:15:19\nchr1\t194090949\tDEL00000262\tC\t<DEL>\t.\tPASS\tPRECISE;SVTYPE=DEL;SVMETHOD=EMBL.DELLYv0.8.1;CHR2=chr1;END=194091113;PE=0;MAPQ=0;CT=3to5;CIPOS=-2,2;CIEND=-2,2;SRMAPQ=60;INSLEN=0;HOMLEN=1;SR=6;SRQ=1;CONSENSUS=GTCTGTACCAAAAATACATAAATTAGCCGGGCATCGTGGTGGGCACCTGCAATTCCAGCTACTTCCTATTATCTGAAAGCGGTTTTGTAAAGTTGGAATTTTTTTTTTTCCCTTAATGTTTGGTAACTCACCAGAGAAAACATTTTGGCCTGAG;CE=1.96244;RDRATIO=0.413108\tGT:GL:GQ:FT:RCL:RC:RCR:CN:DR:DV:RR:RV\t0/1:-26.3822,0,-28.5815:10000:PASS:1503:1707:2093:1:0:0:10:9\t0/0:0,-9.02506,-104.994:90:PASS:2904:6066:2375:2:0:0:30:0\t0/0:0,-6.31815,-73.2965:63:PASS:2243:3034:2099:1:0:0:21:0\nchr1\t194548477\tDEL00000264\tC\t<DEL>\t.\tPASS\tPRECISE;SVTYPE=DEL;SVMETHOD=EMBL.DELLYv0.8.1;CHR2=chr1;END=194548738;PE=0;MAPQ=0;CT=3to5;CIPOS=-3,3;CIEND=-3,3;SRMAPQ=60;INSLEN=0;HOMLEN=4;SR=10;SRQ=1;CONSENSUS=AACTATAGTTAATAATATTATATTATATACTACAAATTTCCAAGAGGGTATTTTTCAAGTGCTTTTACCACACACACACACACACACACATATAGATAAAGAGAACATGTTGGATGGTGAGGTGTTGAAAAAATGGAATGAAGGAGTACTTAAAAGTGATAAGATAGAAAAGTTATTTAGCTTATTTAGATAATTTA;CE=1.83588;RDRATIO=0.516082\tGT:GL:GQ:FT:RCL:RC:RCR:CN:DR:DV:RR:RV\t0/1:-29.7738,0,-50.1743:10000:PASS:5263:5630:4243:1:0:0:16:11\t0/0:0,-10.23,-119.595:102:PASS:5112:9669:5159:2:0:0:34:0\t0/0:0,-9.02635,-105.895:90:PASS:4501:10605:4740:2:0:0:30:0\nchr1\t198492645\tDEL00000269\tG\t<DEL>\t.\tPASS\tPRECISE;SVTYPE=DEL;SVMETHOD=EMBL.DELLYv0.8.1;CHR2=chr1;END=198492753;PE=0;MAPQ=0;CT=3to5;CIPOS=-9,9;CIEND=-9,9;SRMAPQ=60;INSLEN=0;HOMLEN=8;SR=16;SRQ=1;CONSENSUS=AAATTTTGCCCAGGTTGCCAAATTTTTAATAACAAAACAATTGGAAGACAATTACTATTTAAAATGTGAGCAGTTATTACAATGTAAATATAGGTTTTCTATATTTACATTGTATATTTACATTGTATATTCTATATTTACATAATATATTCTATATTTACATTGCATAGACCTCTACTTATAAGAAATTTAATAATATCCAT;CE=1.75071;RDRATIO=0.56825\tGT:GL:GQ:FT:RCL:RC:RCR:CN:DR:DV:RR:RV\t0/0:0,-6.61767,-75.195:66:PASS:1776:3237:1736:2:0:0:22:0\t0/1:-55.8705,0,-33.9711:10000:PASS:2242:2019:1524:1:0:0:12:18\t0/0:0,-9.62872,-113.996:96:PASS:2212:4454:2509:2:0:0:32:0\nchr1\t199140919\tDEL00000270\tG\t<DEL>\t.\tPASS\tPRECISE;SVTYPE=DEL;SVMETHOD=EMBL.DELLYv0.8.1;CHR2=chr1;END=199144678;PE=16;MAPQ=60;CT=3to5;CIPOS=-2,2;CIEND=-2,2;SRMAPQ=60;INSLEN=0;HOMLEN=1;SR=8;SRQ=1;CONSENSUS=GCCAGGTGTAGTGGCACACATCTGTAGTACTAGCTACTTGGGAGGCTGAGACAGGAGAATCGCTTGAACTCGGGAGGTGGAGGTTGCAGTGAGCAGAGTGCAGGAGACAAAGTTATTCTATGCAGAAGAATCTGCTTACACAAGGACACAAAGAA;CE=1.9525;RDRATIO=0.509139\tGT:GL:GQ:FT:RCL:RC:RCR:CN:DR:DV:RR:RV\t0/0:0,-8.72601,-103.296:87:PASS:226:455:232:2:39:0:29:0\t0/1:-37.9758,0,-35.2766:10000:PASS:229:249:232:1:20:16:12:13\t0/0:0,-10.2307,-121.496:102:PASS:233:488:227:2:41:0:34:0\nchr1\t201256557\tDUP00000194\tG\t<DUP>\t.\tPASS\tIMPRECISE;SVTYPE=DUP;SVMETHOD=EMBL.DELLYv0.8.1;CHR2=chr1;END=201257455;PE=4;MAPQ=41;CT=5to3;CIPOS=-239,239;CIEND=-239,239;RDRATIO=1.56596\tGT:GL:GQ:FT:RCL:RC:RCR:CN:DR:DV:RR:RV\t0/1:-9.19075,0,-25.0355:92:PASS:41:131:45:3:5:4:0:0\t0/0:0,-2.10721,-42:21:PASS:52:107:58:2:7:0:0:0\t0/1:-10.6881,0,-47.5378:107:PASS:60:145:53:3:10:6:0:0\nchr1\t203918556\tDEL00000274\tT\t<DEL>\t.\tPASS\tIMPRECISE;SVTYPE=DEL;SVMETHOD=EMBL.DELLYv0.8.1;CHR2=chr1;END=203920759;PE=20;MAPQ=60;CT=3to5;CIPOS=-158,158;CIEND=-158,158;RDRATIO=0.797601\tGT:GL:GQ:FT:RCL:RC:RCR:CN:DR:DV:RR:RV\t0/0:0,-8.12678,-134.299:81:PASS:145:184:121:1:27:0:0:0\t0/1:-51.7768,0,-63.6743:10000:PASS:141:103:125:1:15:10:0:0\t0/1:-51.2725,0,-74.0722:10000:PASS:139:128:93:1:17:10:0:0\nchr1\t203925194\tDEL00000275\tC\t<DEL>\t.\tPASS\tIMPRECISE;SVTYPE=DEL;SVMETHOD=EMBL.DELLYv0.8.1;CHR2=chr1;END=203926753;PE=16;MAPQ=60;CT=3to5;CIPOS=-50,50;CIEND=-50,50;RDRATIO=0.66879\tGT:GL:GQ:FT:RCL:RC:RCR:CN:DR:DV:RR:RV\t0/0:0,-8.72986,-174:87:PASS:79:198:86:2:29:0:0:0\t0/1:-26.8764,0,-87.1057:10000:PASS:72:126:85:2:16:7:0:0\t0/1:-45.9773,0,-65.2791:10000:PASS:78:101:87:1:12:10:0:0\nchr1\t203966710\tDEL00000276\tA\t<DEL>\t.\tPASS\tPRECISE;SVTYPE=DEL;SVMETHOD=EMBL.DELLYv0.8.1;CHR2=chr1;END=203976315;PE=30;MAPQ=60;CT=3to5;CIPOS=-1,1;CIEND=-1,1;SRMAPQ=60;INSLEN=0;HOMLEN=0;SR=17;SRQ=0.979381;CONSENSUS=TCTACTAAAAATACAAAAAATTAGCTGAGTGTGGTGGCACGTGCCTATAGTCCCAGCTACTCGGGAGCCTGAGGCAGGGGAATTGCTTGAACCCAGGAGACAGAGGTTTAATAGATTTAATAACTGGATGGGGGCAAGTCCCTAAAGTTTTTCAACAAAGAGGCTTTCCATCTCGTGTGATGTCATGGCCTAG;CE=1.98429;RDRATIO=0.483036\tGT:GL:GQ:FT:RCL:RC:RCR:CN:DR:DV:RR:RV\t0/0:0,-9.02701,-106.696:90:PASS:578:1205:552:2:42:0:30:0\t0/1:-50.4676,0,-49.7671:10000:PASS:646:605:566:1:18:20:17:17\t0/1:-47.27,0,-44.2711:10000:PASS:549:563:544:1:19:11:15:16\nchr1\t207119002\tINV00000125\tA\t<INV>\t.\tPASS\tIMPRECISE;SVTYPE=INV;SVMETHOD=EMBL.DELLYv0.8.1;CHR2=chr1;END=207119851;PE=12;MAPQ=60;CT=5to5;CIPOS=-398,398;CIEND=-398,398;RDRATIO=0.632284\tGT:GL:GQ:FT:RCL:RC:RCR:CN:DR:DV:RR:RV\t1/1:-36,-1.80618,0:18:PASS:62:9:45:0:0:6:0:0\t0/0:0,-11.1381,-222:111:PASS:65:117:40:2:37:0:0:0\t0/1:-29.6784,0,-83.6784:10000:PASS:43:62:45:1:15:6:0:0\nchr1\t207119018\tDEL00000279\tA\t<DEL>\t.\tPASS\tIMPRECISE;SVTYPE=DEL;SVMETHOD=EMBL.DELLYv0.8.1;CHR2=chr1;END=207119851;PE=11;MAPQ=60;CT=3to5;CIPOS=-183,183;CIEND=-183,183;RDRATIO=0.700714\tGT:GL:GQ:FT:RCL:RC:RCR:CN:DR:DV:RR:RV\t1/1:-24,-1.20412,0:12:LowQual:57:9:44:0:0:4:0:0\t0/0:0,-10.8371,-216:108:PASS:67:113:39:2:36:0:0:0\t0/1:-35.3773,0,-83.3773:10000:PASS:40:62:43:1:15:7:0:0\nchr1\t209586217\tDEL00000281\tC\t<DEL>\t.\tPASS\tPRECISE;SVTYPE=DEL;SVMETHOD=EMBL.DELLYv0.8.1;CHR2=chr1;END=209587911;PE=37;MAPQ=60;CT=3to5;CIPOS=-5,5;CIEND=-5,5;SRMAPQ=60;INSLEN=0;HOMLEN=4;SR=20;SRQ=0.995392;CONSENSUS=CCTGGTAGGGGAAAGATCCTTCCTCTCCCCTTCTGGAAGCCAGAGTAGAGTGCCTAGCTGGGAAGGTTAATAGTAATGAGCGTCCAACCTGTACAAAAGAGGCACCTTTTAGAGATGATCCAACTGATAACCTCCCTCCCAAGGCCCATAGGCTTTTCTGAGTCATGCTCCCAAAGAATGGAAAATCCCGGAAGCAGAGACTATAAAGCAGTCTTA;CE=1.99084;RDRATIO=0.545794\tGT:GL:GQ:FT:RCL:RC:RCR:CN:DR:DV:RR:RV\t0/0:0,-8.12409,-95.2963:81:PASS:106:199:108:2:34:0:27:0\t1/1:-78.3973,-3.82185,0:38:PASS:108:7:106:0:1:27:1:23\t0/1:-34.9747,0,-42.6747:10000:PASS:93:101:106:1:18:10:14:12\nchr1\t209761663\tDUP00000201\tC\t<DUP>\t.\tPASS\tPRECISE;SVTYPE=DUP;SVMETHOD=EMBL.DELLYv0.8.1;CHR2=chr1;END=209762735;PE=30;MAPQ=60;CT=5to3;CIPOS=-2,2;CIEND=-2,2;SRMAPQ=60;INSLEN=0;HOMLEN=1;SR=19;SRQ=0.968912;CONSENSUS=GAAGCCACCCAAACACCACCGTGGTAAGAGCAGAGCCTCCCTCACTCCACAGGGCCTGCAGAGAATCCTGAGACAGCTGCCCCAGCTCACTTAGTAACTAGCTGTTACTAAGAGAAAGGAAGCTTTCCTTTGAATATGGAAGGAACCTTATGGATTATCTATTCCAAACTCCTCACTACACAGACAGAAGACT;CE=1.96913;RDRATIO=1.52789\tGT:GL:GQ:FT:RCL:RC:RCR:CN:DR:DV:RR:RV\t0/1:-47.9604,0,-74.4602:10000:PASS:77:146:68:2:27:8:24:17\t0/0:0,-9.92939,-118.095:99:PASS:75:127:85:2:43:0:33:0\t0/1:-47.8572,0,-89.8544:10000:PASS:61:171:80:2:37:22:29:17\nchr1\t215021384\tDEL00000289\tG\t<DEL>\t.\tPASS\tPRECISE;SVTYPE=DEL;SVMETHOD=EMBL.DELLYv0.8.1;CHR2=chr1;END=215021438;PE=0;MAPQ=0;CT=3to5;CIPOS=-3,3;CIEND=-3,3;SRMAPQ=60;INSLEN=0;HOMLEN=2;SR=20;SRQ=0.985646;CONSENSUS=AATCTTGGTCAATGTGATGGTTGATTTTAGGTGTCGGCTTGACTGGGTTAAGGGTTACCCAGATAGCTGGGAAAGCATTATGTCTGGACACATCTCTGAGGGTGTTTCCAGAAGGTGGGCAGGCACTTTTCTATTTGTTGAGGTCCTTGCTAGAACAAAAGGCAGAGGAAAGATGGATTTGCCCTCTCTTCTGGAGCTGGGACAACCA;CE=1.96884;RDRATIO=0.702882\tGT:GL:GQ:FT:RCL:RC:RCR:CN:DR:DV:RR:RV\t0/0:0,-8.12423,-96.2964:81:PASS:1004:1923:858:2:0:0:27:0\t1/1:-174.493,-14.7436,0:147:PASS:911:20:553:0:0:0:0:49\t0/1:-18.7804,0,-46.0781:10000:PASS:607:919:659:1:0:0:15:7\nchr1\t217096616\tDEL00000291\tT\t<DEL>\t.\tPASS\tPRECISE;SVTYPE=DEL;SVMETHOD=EMBL.DELLYv0.8.1;CHR2=chr1;END=217096682;PE=0;MAPQ=0;CT=3to5;CIPOS=-3,3;CIEND=-3,3;SRMAPQ=60;INSLEN=0;HOMLEN=2;SR=20;SRQ=1;CONSENSUS=CAGAACCTGGATTTCCTCTTAGTAACTGCCCTATCATCCTCCAACAATCCTCAGGTAACGATCCTTAGAGCACTGGTGTTTACGAGTCGCCAAAGGGGTGGATTGACTGAACCCAATCATGACAGCCCACTGAGGTTAATCTCTCCTTTGTCTCTACTTCCATCCACAAACTGATATCATTGTATTTATGCTTTAATTATTATTAATATGACT;CE=1.95931;RDRATIO=0.56766\tGT:GL:GQ:FT:RCL:RC:RCR:CN:DR:DV:RR:RV\t0/1:-39.5747,0,-38.9745:10000:PASS:1097:1084:902:1:0:0:13:13\t0/0:0,-12.0359,-142.895:120:PASS:1479:3353:1786:2:0:0:40:0\t0/1:-70.6674,0,-25.8713:10000:PASS:866:1040:918:1:0:0:10:23\nchr1\t225574614\tDEL00000300\tA\t<DEL>\t.\tPASS\tPRECISE;SVTYPE=DEL;SVMETHOD=EMBL.DELLYv0.8.1;CHR2=chr1;END=225574932;PE=0;MAPQ=0;CT=3to5;CIPOS=-6,6;CIEND=-6,6;SRMAPQ=60;INSLEN=0;HOMLEN=6;SR=5;SRQ=1;CONSENSUS=TGAGATTCGCTTGAACCTGGGAGGCAGAGGTTGCCGTGAGCCAACAGTACGCCACTGCACTCCAGCCTGGGTGACAAAGTGAGACTCTGTCTCCAAAATATATAAAAAAAAAAAAAAAAGATTGTGCATTCAGATACGAATAATAAACATA;CE=1.9422;RDRATIO=0.55857\tGT:GL:GQ:FT:RCL:RC:RCR:CN:DR:DV:RR:RV\t1/1:-73.597,-6.31858,0:63:PASS:4746:320:5615:0:0:0:0:21\t0/0:0,-5.41343,-59.4949:54:PASS:5086:7577:5398:1:0:0:18:0\t0/1:-20.5809,0,-39.9788:10000:PASS:5621:4267:4949:1:0:0:14:8\nchr1\t226424986\tDEL00000305\tG\t<DEL>\t.\tPASS\tPRECISE;SVTYPE=DEL;SVMETHOD=EMBL.DELLYv0.8.1;CHR2=chr1;END=226425195;PE=0;MAPQ=0;CT=3to5;CIPOS=-4,4;CIEND=-4,4;SRMAPQ=60;INSLEN=0;HOMLEN=3;SR=20;SRQ=0.995434;CONSENSUS=TTAGACAATCCCTCTGGTTGCATTGTGAGGAAAGCTGCAAGGCTGCAGGCAGAGAAAATTGGGAGCTGTTGGAGCCATCCTGGTGAGAGGTGATGGCGGCCTGGACCAGGACAGTGGCAATAGACTTTTTGGATAACAATGAATAACAGAGCTAACATTTTTTGCATGATGATGTGAGCCCTTCTAAGCACTGTACATGTATTAATTTCATTTATTACC;CE=1.97824;RDRATIO=0.483092\tGT:GL:GQ:FT:RCL:RC:RCR:CN:DR:DV:RR:RV\t0/0:0,-7.12975,-113.495:71:PASS:4005:7703:3757:2:0:0:33:1\t0/1:-61.2789,0,-0.281114:5:LowQual:3131:341:3235:0:0:0:2:19\t0/1:-30.6725,0,-55.2716:10000:PASS:3835:3937:4377:1:0:0:18:11\nchr1\t227264352\tDEL00000307\tA\t<DEL>\t.\tPASS\tPRECISE;SVTYPE=DEL;SVMETHOD=EMBL.DELLYv0.8.1;CHR2=chr1;END=227264644;PE=0;MAPQ=0;CT=3to5;CIPOS=-3,3;CIEND=-3,3;SRMAPQ=60;INSLEN=0;HOMLEN=2;SR=15;SRQ=0.989418;CONSENSUS=ATTTTCTTATAGAAAGCAATTCCAAACATAATGAGCAGATGCTTGCTGGCTCTAATAAATAAGCTATATGCCTTGTCCTTCTCCCTATATCTGAGGATCATGCCCTAAGTTTTATCAGTTTTAAAAATTTTTTAATTTCAAGGTAAGAGGCTTTAACATGAGAAATAAAATATATGCCAGTCCATTATG;CE=1.90031;RDRATIO=0.615312\tGT:GL:GQ:FT:RCL:RC:RCR:CN:DR:DV:RR:RV\t0/1:-44.5718,0,-41.3721:10000:PASS:4852:6015:4967:1:0:0:14:15\t0/0:0,-7.82336,-92.3966:78:PASS:5144:10346:5248:2:0:0:26:0\t0/1:-35.5756,0,-39.5756:10000:PASS:4287:4041:3930:1:0:0:13:12\nchr1\t227749750\tDEL00000308\tC\t<DEL>\t.\tPASS\tPRECISE;SVTYPE=DEL;SVMETHOD=EMBL.DELLYv0.8.1;CHR2=chr1;END=227749820;PE=0;MAPQ=0;CT=3to5;CIPOS=-12,12;CIEND=-12,12;SRMAPQ=60;INSLEN=0;HOMLEN=12;SR=8;SRQ=1;CONSENSUS=AGTGTGTGTTGAGTTTGCCGTCCTTCTCTATTGCTCTCTACCCCTTTTTTAAGGACACGTCCTTGAGAGCCTGTGTGTGTGTCTGTGTGTGTCATCTGTGTGTGTGTGTTTCAGTACACATAGCTCAGGTTTTTACATGCTTTCAATTACTTTTATTATTTCTTGAAAAGTCATTTTGAAGCGTGTTGTTT;CE=1.8707;RDRATIO=0.787346\tGT:GL:GQ:FT:RCL:RC:RCR:CN:DR:DV:RR:RV\t0/1:-38.6713,0,-51.1703:10000:PASS:1160:1763:945:2:0:0:17:13\t0/0:0,-10.8318,-126.595:108:PASS:1640:3438:1592:2:0:0:36:0\t0/0:0,-10.5321,-125.996:105:PASS:1622:3287:1482:2:0:0:35:0\nchr1\t229237641\tDEL00000310\tG\t<DEL>\t.\tPASS\tPRECISE;SVTYPE=DEL;SVMETHOD=EMBL.DELLYv0.8.1;CHR2=chr1;END=229238016;PE=0;MAPQ=0;CT=3to5;CIPOS=-2,2;CIEND=-2,2;SRMAPQ=60;INSLEN=0;HOMLEN=1;SR=8;SRQ=0.989305;CONSENSUS=ACCTTTCAAAGAGTAATAAAACCTGGATCCATTCACTTTGGTTTTGAATGGCCAAAACAATCCAGGGATTGTTAAGTGCTGTGACTTAAGAAAGCATCCATTCTGAAATGCTGTAAAAAAAAAAAAAAAAAGTATTTAATGGCATGAAAAATGTTCACAACCCATTGTTTAATGAAGAACAAATT;CE=1.8776;RDRATIO=0.736956\tGT:GL:GQ:FT:RCL:RC:RCR:CN:DR:DV:RR:RV\t0/1:-25.475,0,-58.5711:10000:PASS:5846:9313:7134:1:0:0:20:10\t0/0:0,-8.12189,-92.7941:81:PASS:6088:13084:7351:2:0:0:27:0\t0/0:0,-9.02325,-102.592:90:PASS:6433:14614:8908:2:0:0:30:0\nchr1\t229676786\tDEL00000311\tA\t<DEL>\t.\tPASS\tPRECISE;SVTYPE=DEL;SVMETHOD=EMBL.DELLYv0.8.1;CHR2=chr1;END=229685090;PE=34;MAPQ=60;CT=3to5;CIPOS=-5,5;CIEND=-5,5;SRMAPQ=60;INSLEN=0;HOMLEN=4;SR=20;SRQ=0.99495;CONSENSUS=AAAGTTGGTACAGGTTCACATTTTTCTTCAGTGAACTTTTTCTGGTTTCTGTAATTAGTCCTATTAAGACGTCAGCCCATTGTATTTAGTAGAGATGGGGTTTCACCATATTGGCCAGAATAGTCTTGATCCCTTGACCTTGTGATCTGCCTGCCTCGGCCTCCCAAAGTGCTGAGATTACAGGTGTGAACCTCACCT;CE=1.96847;RDRATIO=0.578085\tGT:GL:GQ:FT:RCL:RC:RCR:CN:DR:DV:RR:RV\t0/0:0,-6.01755,-70.2969:60:PASS:534:996:511:2:19:0:20:0\t1/1:-87.7964,-7.52216,0:75:PASS:531:21:524:0:0:24:0:25\t0/1:-23.9735,0,-59.2722:10000:PASS:454:535:517:1:21:11:19:9\nchr1\t229996842\tDEL00000312\tA\t<DEL>\t.\tPASS\tIMPRECISE;SVTYPE=DEL;SVMETHOD=EMBL.DELLYv0.8.1;CHR2=chr1;END=229998132;PE=7;MAPQ=60;CT=3to5;CIPOS=-224,224;CIEND=-224,224;RDRATIO=0.513893\tGT:GL:GQ:FT:RCL:RC:RCR:CN:DR:DV:RR:RV\t0/1:-35.0794,0,-71.9794:10000:PASS:69:84:64:1:13:7:0:0\t0/0:0,-10.235,-204:102:PASS:91:164:82:2:34:0:0:0\t0/0:0,-7.82677,-156:78:PASS:63:161:68:2:26:0:0:0\nchr1\t232322844\tDEL00000314\tA\t<DEL>\t.\tPASS\tPRECISE;SVTYPE=DEL;SVMETHOD=EMBL.DELLYv0.8.1;CHR2=chr1;END=232324506;PE=12;MAPQ=60;CT=3to5;CIPOS=-4,4;CIEND=-4,4;SRMAPQ=60;INSLEN=0;HOMLEN=5;SR=16;SRQ=1;CONSENSUS=AAAACCTGGCCACATTCAGAAGAGAAAGCATACATACATTTCCACTCACATGATAGGCCTGTTTATGGTCTGTATGTATTGAAAGAGTAAGAACAATAAATACCTAAGGCTCTAAAGAACAAAACTAGGAGCAGATTTATTTTCCATATGAATACAAACTTTTCAACAAAACAAGAAAAAGCATCCTAAATATTGAACACGGTT;CE=1.88604;RDRATIO=0.406526\tGT:GL:GQ:FT:RCL:RC:RCR:CN:DR:DV:RR:RV\t0/1:-50.6697,0,-41.0705:10000:PASS:105:83:101:1:17:12:14:17\t0/0:0,-6.31815,-74.2965:63:PASS:135:228:102:2:30:0:21:0\t0/0:0,-5.82862,-104.897:58:PASS:133:223:92:2:40:0:30:1\nchr1\t232700829\tDEL00000315\tC\t<DEL>\t.\tPASS\tPRECISE;SVTYPE=DEL;SVMETHOD=EMBL.DELLYv0.8.1;CHR2=chr1;END=232701014;PE=0;MAPQ=0;CT=3to5;CIPOS=-3,3;CIEND=-3,3;SRMAPQ=53;INSLEN=0;HOMLEN=3;SR=12;SRQ=1;CONSENSUS=AAAAACATCGACAGGGTTATTATCTCCATTTTACAGATGACGAAACACAGTCCTTATGAAGTTGACTGGCCAGGCATGGTGGCTCAGCTCAGGAGGCGGAGGTTGCCGTGAACAGAGATCACACCACTGCACTCCAGCCTGGGCGACAGAGTGAGACTCCATCTCAAAAAAAAAAAAAAAAAAAAA;CE=1.95202;RDRATIO=0.790866\tGT:GL:GQ:FT:RCL:RC:RCR:CN:DR:DV:RR:RV\t0/1:-10.1859,0,-34.7849:102:PASS:2457:2676:1026:2:0:0:11:4\t0/0:0,-8.72546,-102.696:87:PASS:4102:6572:2663:2:0:0:29:0\t0/1:-52.5712,0,-44.6676:10000:PASS:3671:3646:2632:1:0:0:16:17\nchr1\t235373798\tDEL00000319\tG\t<DEL>\t.\tPASS\tIMPRECISE;SVTYPE=DEL;SVMETHOD=EMBL.DELLYv0.8.1;CHR2=chr1;END=235375034;PE=9;MAPQ=60;CT=3to5;CIPOS=-148,148;CIEND=-148,148;RDRATIO=0.510716\tGT:GL:GQ:FT:RCL:RC:RCR:CN:DR:DV:RR:RV\t0/1:-41.3712,0,-92.1829:10000:PASS:55:72:74:1:18:10:0:0\t0/0:0,-9.93388,-192.3:99:PASS:65:153:75:2:33:0:0:0\t0/0:0,-7.82677,-155.9:78:PASS:80:120:74:2:26:0:0:0\nchr1\t236097102\tDUP00000216\tA\t<DUP>\t.\tPASS\tIMPRECISE;SVTYPE=DUP;SVMETHOD=EMBL.DELLYv0.8.1;CHR2=chr1;END=236097402;PE=5;MAPQ=22;CT=5to3;CIPOS=-523,523;CIEND=-523,523;RDRATIO=1.98406\tGT:GL:GQ:FT:RCL:RC:RCR:CN:DR:DV:RR:RV\t0/0:0,-2.87952,-92.504:29:PASS:6286:63757:5706:11:20:2:0:0\t0/1:-4.6691,0,-121.079:47:PASS:5570:130538:6805:21:25:10:0:0\t0/1:-2.27314,0,-63.7853:23:PASS:4859:100709:5258:20:14:7:0:0\nchr1\t237402807\tINV00000135\tA\t<INV>\t.\tPASS\tIMPRECISE;SVTYPE=INV;SVMETHOD=EMBL.DELLYv0.8.1;CHR2=chr1;END=237402912;PE=24;MAPQ=60;CT=3to3;CIPOS=-383,383;CIEND=-383,383;RDRATIO=0.86708\tGT:GL:GQ:FT:RCL:RC:RCR:CN:DR:DV:RR:RV\t0/1:-150.862,0,-48.8619:10000:PASS:1373:2668:1600:2:10:27:0:0\t0/0:0,-10.536,-210:105:PASS:1392:4155:2290:2:35:0:0:0\t0/1:-69.2701,0,-87.2701:10000:PASS:1100:2363:1315:2:16:13:0:0\nchr1\t238689007\tDEL00000322\tT\t<DEL>\t.\tPASS\tPRECISE;SVTYPE=DEL;SVMETHOD=EMBL.DELLYv0.8.1;CHR2=chr1;END=238689951;PE=6;MAPQ=60;CT=3to5;CIPOS=-15,15;CIEND=-15,15;SRMAPQ=60;INSLEN=0;HOMLEN=14;SR=11;SRQ=0.989474;CONSENSUS=AACTAATTTACATTCTTATATGTTATATTCCGCCGTTCTATCTGTTATATTTTATGTTCTGCCTATATATGCTTTTTATATTAAAAAAACTACTTTTACAAAACTGATACAGTTAGTGATCAAGTAAAATCAAATATAGCTCTGTGACACTGTCTTCCTCACAACTTTCTTTTCTCCTGAAAAATTTCAT;CE=1.81151;RDRATIO=0.299296\tGT:GL:GQ:FT:RCL:RC:RCR:CN:DR:DV:RR:RV\t0/0:0,-6.01776,-70.3972:60:PASS:64:56:55:1:24:0:20:0\t0/1:-49.8795,0,-27.9739:10000:PASS:79:20:63:0:11:7:11:16\t0/0:0,-6.61872,-75.6961:66:PASS:51:46:56:1:23:0:22:0\nchr1\t239959523\tDEL00000325\tT\t<DEL>\t.\tPASS\tPRECISE;SVTYPE=DEL;SVMETHOD=EMBL.DELLYv0.8.1;CHR2=chr1;END=239959958;PE=0;MAPQ=0;CT=3to5;CIPOS=-5,5;CIEND=-5,5;SRMAPQ=60;INSLEN=0;HOMLEN=5;SR=12;SRQ=0.994872;CONSENSUS=AGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGCAGAAAGAAAGAATTAATTTCCATTCAGGGATTTTTTTCTTTAATATGAGTTGTATCTTCTTTCCTTCCTATCTGCCCTCCTTCCTTCATTTTTTCCTTCCTTCATCCTTCCTTCCCCTCCCTTTCTCC;CE=1.91037;RDRATIO=0.711551\tGT:GL:GQ:FT:RCL:RC:RCR:CN:DR:DV:RR:RV\t0/0:0,-8.12139,-91.3936:81:PASS:8875:18352:7434:2:0:0:27:0\t0/1:-28.8736,0,-47.3909:10000:PASS:4110:9344:7560:2:0:0:16:12\t0/1:-18.7771,0,-48.0816:10000:PASS:6783:9832:6904:1:0:0:16:9\nchr1\t240139270\tDEL00000326\tC\t<DEL>\t.\tPASS\tPRECISE;SVTYPE=DEL;SVMETHOD=EMBL.DELLYv0.8.1;CHR2=chr1;END=240139364;PE=0;MAPQ=0;CT=3to5;CIPOS=-3,3;CIEND=-3,3;SRMAPQ=60;INSLEN=0;HOMLEN=3;SR=10;SRQ=1;CONSENSUS=TTGGTTGCTCATGTAAAGGTAAGGGAGTGGGCAGAGACAAGGAGAATGTCCAGGTTTCTGGTCTGAGCACTAGGGTAGATAGAGGGTGATGCAATTCACACAAAAAGGCCATTAGTTTTTTGTATCTGAGGTCAGGAGAGAGAGCCTAGGAGAAGAGAGATTGACGACTCTTCAGTGTGTAGATGATACTTGAAGCCATTATGCTCTG;CE=1.94317;RDRATIO=0.564316\tGT:GL:GQ:FT:RCL:RC:RCR:CN:DR:DV:RR:RV\t0/0:0,-9.0273,-107.696:90:PASS:2005:3731:1844:2:0:0:30:0\t0/1:-36.0701,0,-55.3702:10000:PASS:1891:2171:1687:1:0:0:18:13\t0/0:0,-8.12419,-95.6964:81:PASS:1485:3545:1812:2:0:0:27:0\nchr1\t241465747\tDEL00000329\tA\t<DEL>\t.\tPASS\tPRECISE;SVTYPE=DEL;SVMETHOD=EMBL.DELLYv0.8.1;CHR2=chr1;END=241465799;PE=0;MAPQ=0;CT=3to5;CIPOS=-2,2;CIEND=-2,2;SRMAPQ=60;INSLEN=0;HOMLEN=1;SR=7;SRQ=0.993865;CONSENSUS=TTCTTTTCTTTCCTTAAGTCGAAGACTTTCACTTTTTCACTTAATGGAAGCAACGTATGGCTTCTCTTTGGCATGTCCTGATTGTCAGCATCAAATCACTACAATAAGGTGAAATCAGTCTGACAACCCGGACAACGATGAAGTGACTAATGGACAGGTAACA;CE=1.96834;RDRATIO=0.754135\tGT:GL:GQ:FT:RCL:RC:RCR:CN:DR:DV:RR:RV\t0/1:-35.4676,0,-64.5669:10000:PASS:863:1257:847:1:0:0:21:13\t0/0:0,-9.62882,-113.596:96:PASS:1017:2084:1121:2:0:0:32:0\t0/0:0,-7.22169,-85.197:72:PASS:855:1535:880:2:0:0:24:0\nchr1\t242956483\tINV00000141\tC\t<INV>\t.\tPASS\tIMPRECISE;SVTYPE=INV;SVMETHOD=EMBL.DELLYv0.8.1;CHR2=chr1;END=245126035;PE=6;MAPQ=60;CT=5to5;CIPOS=-385,385;CIEND=-385,385;RDRATIO=0.997322\tGT:GL:GQ:FT:RCL:RC:RCR:CN:DR:DV:RR:RV\t0/0:0,-7.52219,-139.196:75:PASS:131324:260267:131938:2:25:0:0:0\t0/1:-20.5303,0,-124.33:10000:PASS:141987:280259:142096:2:26:8:0:0\t0/0:0,-9.63275,-179:96:PASS:131161:260378:132063:2:32:0:0:0\nchr1\t242964496\tDEL00000330\tC\t<DEL>\t.\tPASS\tIMPRECISE;SVTYPE=DEL;SVMETHOD=EMBL.DELLYv0.8.1;CHR2=chr1;END=242965914;PE=9;MAPQ=33;CT=3to5;CIPOS=-354,354;CIEND=-354,354;RDRATIO=0.580755\tGT:GL:GQ:FT:RCL:RC:RCR:CN:DR:DV:RR:RV\t0/0:0,-7.73498,-192.401:77:PASS:72:187:95:2:33:1:0:0\t0/1:-16.8702,0,-97.7319:10000:PASS:72:106:91:1:18:11:0:0\t0/0:0,-1.42674,-110.166:14:LowQual:82:89:84:1:20:6:0:0\nchr1\t245443435\tDUP00000219\tG\t<DUP>\t.\tPASS\tIMPRECISE;SVTYPE=DUP;SVMETHOD=EMBL.DELLYv0.8.1;CHR2=chr1;END=245444092;PE=3;MAPQ=36;CT=5to3;CIPOS=-142,142;CIEND=-142,142;RDRATIO=2.2963\tGT:GL:GQ:FT:RCL:RC:RCR:CN:DR:DV:RR:RV\t0/1:-5.98876,0,-48.2878:60:PASS:31:66:35:2:10:2:0:0\t0/0:0,-4.21435,-80.3999:42:PASS:35:27:27:1:14:0:0:0\t0/1:-2.21452,0,-30.7068:22:PASS:32:60:42:2:10:3:0:0\nchr1\t245976727\tDUP00000220\tC\t<DUP>\t.\tPASS\tIMPRECISE;SVTYPE=DUP;SVMETHOD=EMBL.DELLYv0.8.1;CHR2=chr1;END=245977072;PE=3;MAPQ=40;CT=5to3;CIPOS=-474,474;CIEND=-474,474;RDRATIO=1.65152\tGT:GL:GQ:FT:RCL:RC:RCR:CN:DR:DV:RR:RV\t0/0:0,-0.902568,-12.6995:10:LowQual:125:2221:5614:1:3:0:0:0\t0/1:-7.79186,0,-59.1881:78:PASS:472:9598:6919:3:14:4:0:0\t0/0:0,-3.13748,-56.0262:31:PASS:494:5641:6680:2:11:0:0:0\nchr1\t246003980\tDEL00000333\tA\t<DEL>\t.\tPASS\tPRECISE;SVTYPE=DEL;SVMETHOD=EMBL.DELLYv0.8.1;CHR2=chr1;END=246004078;PE=0;MAPQ=0;CT=3to5;CIPOS=-2,2;CIEND=-2,2;SRMAPQ=60;INSLEN=0;HOMLEN=2;SR=17;SRQ=0.990099;CONSENSUS=GATTTATTACACAAGTGATTATCCTAGAGATACTGGGACCCACGACATGGGGCTCCACCAATGTTCCTCTGTTATATAAGGTCAGGTATGAGTTCTGGGAAGCCACAGTAAAATGGGAATGAGCCTACCGACTTCATAGGATTGCTGTGAGGATTAAATGGAAATCGGTACGCAAAATGGCCAGCACAGTGCTAACATCTAG;CE=1.98285;RDRATIO=0.535676\tGT:GL:GQ:FT:RCL:RC:RCR:CN:DR:DV:RR:RV\t0/1:-46.5669,0,-54.8671:10000:PASS:2065:1969:1408:1:0:0:18:16\t0/1:-42.3773,0,-25.5791:10000:PASS:890:1062:1111:1:0:0:9:14\t0/0:0,-9.62697,-114.694:96:PASS:1850:4152:2073:2:0:0:32:0\nchr1\t246072090\tDUP00000222\tG\t<DUP>\t.\tLowQual\tIMPRECISE;SVTYPE=DUP;SVMETHOD=EMBL.DELLYv0.8.1;CHR2=chr1;END=246072360;PE=2;MAPQ=54;CT=5to3;CIPOS=-565,565;CIEND=-565,565;RDRATIO=1.77934\tGT:GL:GQ:FT:RCL:RC:RCR:CN:DR:DV:RR:RV\t0/0:0,-4.51842,-99.8272:45:PASS:1550:13854:5755:4:18:1:0:0\t0/0:0,-3.50723,-49.1949:35:PASS:2037:16114:4572:5:12:0:0:0\t0/1:-2.73943,0,-80.2296:27:PASS:2259:30503:4772:9:17:5:0:0\nchr1\t246519959\tDEL00000334\tT\t<DEL>\t.\tPASS\tIMPRECISE;SVTYPE=DEL;SVMETHOD=EMBL.DELLYv0.8.1;CHR2=chr1;END=246522000;PE=8;MAPQ=60;CT=3to5;CIPOS=-101,101;CIEND=-101,101;RDRATIO=0.597264\tGT:GL:GQ:FT:RCL:RC:RCR:CN:DR:DV:RR:RV\t0/0:0,-6.92356,-131.1:69:PASS:161:199:132:1:23:0:0:0\t0/1:-49.2754,0,-53.822:10000:PASS:142:107:117:1:11:13:0:0\t0/0:0,-4.82059,-112.828:48:PASS:129:175:124:1:19:1:0:0\nchr1\t247991213\tDEL00000340\tG\t<DEL>\t.\tPASS\tIMPRECISE;SVTYPE=DEL;SVMETHOD=EMBL.DELLYv0.8.1;CHR2=chr1;END=247992292;PE=12;MAPQ=60;CT=3to5;CIPOS=-193,193;CIEND=-193,193;RDRATIO=0.416119\tGT:GL:GQ:FT:RCL:RC:RCR:CN:DR:DV:RR:RV\t0/0:0,-9.03089,-180:90:PASS:59:159:57:3:30:0:0:0\t0/1:-25.0691,0,-123.086:10000:PASS:64:61:69:1:22:8:0:0\t0/1:-28.1732,0,-112.173:10000:PASS:68:77:67:1:20:6:0:0\nchr1\t248164315\tDEL00000341\tG\t<DEL>\t.\tPASS\tIMPRECISE;SVTYPE=DEL;SVMETHOD=EMBL.DELLYv0.8.1;CHR2=chr1;END=248165030;PE=5;MAPQ=60;CT=3to5;CIPOS=-198,198;CIEND=-198,198;RDRATIO=0.751467\tGT:GL:GQ:FT:RCL:RC:RCR:CN:DR:DV:RR:RV\t0/0:0,-1.80618,-36:18:PASS:50:61:29:2:6:0:0:0\t0/1:-3.89279,0,-33.8928:39:PASS:45:33:45:1:6:1:0:0\t0/1:-26.3876,0,-38.3876:10000:PASS:49:47:32:1:7:5:0:0\nchr1\t248383139\tDEL00000342\tC\t<DEL>\t.\tPASS\tIMPRECISE;SVTYPE=DEL;SVMETHOD=EMBL.DELLYv0.8.1;CHR2=chr1;END=248384597;PE=14;MAPQ=60;CT=3to5;CIPOS=-61,61;CIEND=-61,61;RDRATIO=0.70412\tGT:GL:GQ:FT:RCL:RC:RCR:CN:DR:DV:RR:RV\t0/0:0,-5.5674,-80.7478:56:PASS:86:132:90:2:19:0:0:0\t0/1:-25.8123,0,-28.2856:10000:PASS:85:53:83:1:9:5:0:0\t0/1:-42.6716,0,-92.1681:10000:PASS:92:94:86:1:22:9:0:0\nchr1\t248938209\tDUP00000229\tT\t<DUP>\t.\tPASS\tIMPRECISE;SVTYPE=DUP;SVMETHOD=EMBL.DELLYv0.8.1;CHR2=chr1;END=248938524;PE=4;MAPQ=40;CT=5to3;CIPOS=-474,474;CIEND=-474,474;RDRATIO=1.25702\tGT:GL:GQ:FT:RCL:RC:RCR:CN:DR:DV:RR:RV\t0/1:-9.69271,0,-18.9188:97:PASS:2625:11697:1166:6:6:4:0:0\t0/0:0,-1.24498,-44.3299:12:LowQual:3801:15189:2387:5:14:1:0:0\t0/0:0,-3.21606,-31.8047:32:PASS:2871:10420:1514:5:11:0:0:0\n"
  },
  {
    "path": "tests/AnnotSV/test_24_HtzCompound/input/3samples.snvindel.vcf",
    "content": "##fileformat=VCFv4.2\n#CHROM\tPOS\tID\tREF\tALT\tQUAL\tFILTER\tINFO\tFORMAT\tprob\tfather\tmother\nchr1\t927744\t.\tG\tT\t3950.90\tPASS\tAC=6;AF=1.00;AN=6;DP=123;ExcessHet=3.0103;FS=0.000;MQ=60.00;MQ0=0;POSITIVE_TRAIN_SITE;QD=32.12;SOR=0.885;set=Intersection\tGT:AD:DP:GQ:PGT:PID:PL:TP\t1|1:0,46:46:99:.:.:1480,138,0:109\t1|1:0,40:40:99:.:.:1304,120,0:109\t1|1:0,37:37:99:1|1:927744_G_T:1193,110,0:109\nchr1\t928622\t.\tG\tC\t2008.16\tPASS\tAC=4;AF=0.667;AN=6;BaseQRankSum=-2.044e+00;ClippingRankSum=0.00;DP=123;ExcessHet=3.9794;FS=0.000;MQ=60.00;MQ0=0;MQRankSum=0.00;POSITIVE_TRAIN_SITE;QD=16.33;ReadPosRankSum=0.494;SOR=0.696;set=Intersection\tGT:AD:DP:GQ:PL:TP\t1|1:2,30:32:47:777,47,0:47\t1|0:17,23:40:99:549,0,420:47\t1|0:22,29:51:99:714,0,567:47\nchr1\t929346\t.\tT\tA\t3757.90\tPASS\tAC=6;AF=1.00;AN=6;BaseQRankSum=-3.210e-01;ClippingRankSum=0.00;DP=116;ExcessHet=3.0103;FS=3.402;MQ=60.00;MQ0=0;MQRankSum=0.00;POSITIVE_TRAIN_SITE;QD=32.40;ReadPosRankSum=-5.060e-01;SOR=0.535;set=Intersection\tGT:AD:DP:GQ:PL:TP\t1|1:0,41:41:99:1355,123,0:72\t1|1:1,35:36:73:1117,73,0:72\t1|1:0,39:39:99:1312,117,0:72\nchr1\t929375\t.\tA\tG\t4310.90\tPASS\tAC=6;AF=1.00;AN=6;BaseQRankSum=-1.113e+00;ClippingRankSum=0.00;DP=100;ExcessHet=3.0103;FS=3.872;MQ=60.00;MQ0=0;MQRankSum=0.00;POSITIVE_TRAIN_SITE;QD=27.52;ReadPosRankSum=-7.180e-01;SOR=0.872;set=Intersection\tGT:AD:DP:GQ:PGT:PID:PL:TP\t1|1:0,33:33:99:1|1:929375_A_G:1459,99,0:45\t1|1:1,33:34:45:1|1:929375_A_G:1386,45,0:45\t1|1:0,33:33:99:1|1:929375_A_G:1492,102,0:45\nchr1\t929377\t.\tG\tA\t4310.90\tPASS\tAC=6;AF=1.00;AN=6;BaseQRankSum=-1.270e-01;ClippingRankSum=0.00;DP=100;ExcessHet=3.0103;FS=3.872;MQ=60.00;MQ0=0;MQRankSum=0.00;POSITIVE_TRAIN_SITE;QD=27.10;ReadPosRankSum=-7.150e-01;SOR=0.872;set=Intersection\tGT:AD:DP:GQ:PGT:PID:PL:TP\t1|1:0,33:33:99:1|1:929375_A_G:1459,99,0:45\t1|1:1,32:33:45:1|1:929375_A_G:1386,45,0:45\t1|1:0,34:34:99:1|1:929375_A_G:1492,102,0:45\nchr1\t929558\t.\tG\tA\t1031.16\tPASS\tAC=2;AF=0.333;AN=6;BaseQRankSum=2.49;ClippingRankSum=0.00;DP=105;ExcessHet=3.9794;FS=4.432;MQ=60.00;MQ0=0;MQRankSum=0.00;POSITIVE_TRAIN_SITE;QD=13.39;ReadPosRankSum=0.699;SOR=1.218;set=Intersection\tGT:AD:DP:GQ:PL:TP\t0|0:28,0:28:81:0,81,1215:81\t0|1:14,14:28:99:386,0,331:81\t0|1:23,26:49:99:677,0,481:81\nchr1\t929839\t.\tG\tA\t1482.16\tPASS\tAC=4;AF=0.667;AN=6;BaseQRankSum=1.32;ClippingRankSum=0.00;DP=80;ExcessHet=3.9794;FS=0.898;MQ=60.00;MQ0=0;MQRankSum=0.00;POSITIVE_TRAIN_SITE;QD=18.53;ReadPosRankSum=-9.860e-01;SOR=0.527;set=Intersection\tGT:AD:DP:GQ:PGT:PID:PL:TP\t1|1:0,26:26:77:1|1:929839_G_A:873,77,0:77\t1|0:13,8:21:99:.:.:190,0,370:77\t1|0:15,18:33:99:.:.:451,0,362:77\nchr1\t930939\t.\tG\tA\t3741.90\tPASS\tAC=6;AF=1.00;AN=6;DP=118;ExcessHet=3.0103;FS=0.000;MQ=60.00;MQ0=0;POSITIVE_TRAIN_SITE;QD=31.71;SOR=0.798;set=Intersection\tGT:AD:DP:GQ:PL:TP\t1|1:0,43:43:99:1382,129,0:95\t1|1:0,43:43:99:1345,129,0:95\t1|1:0,32:32:96:1041,96,0:95\nchr1\t931131\t.\tC\tCCCCT\t499.12\tPASS\tAC=2;AF=0.333;AN=6;BaseQRankSum=0.054;ClippingRankSum=0.00;DP=59;ExcessHet=3.9794;FS=0.000;MQ=60.00;MQ0=0;MQRankSum=0.00;QD=16.64;ReadPosRankSum=-1.030e-01;SOR=0.576;set=Intersection\tGT:AD:DP:GQ:PL:TP\t0|0:29,0:29:51:0,51,765:51\t0|1:7,7:14:99:273,0,297:51\t0|1:9,7:16:99:267,0,373:51\nchr1\t931513\t.\tT\tC\t1145.16\tPASS\tAC=2;AF=0.333;AN=6;BaseQRankSum=2.64;ClippingRankSum=0.00;DP=112;ExcessHet=3.9794;FS=0.883;MQ=60.00;MQ0=0;MQRankSum=0.00;POSITIVE_TRAIN_SITE;QD=15.48;ReadPosRankSum=-5.200e-02;SOR=0.565;set=Intersection\tGT:AD:DP:GQ:PL:TP\t0|0:38,0:38:99:0,100,1175:99\t0|1:15,17:32:99:476,0,354:99\t0|1:16,26:42:99:701,0,430:99\nchr1\t932204\t.\tA\tT\t1074.16\tPASS\tAC=2;AF=0.333;AN=6;BaseQRankSum=1.76;ClippingRankSum=0.00;DP=126;ExcessHet=3.9794;FS=0.815;MQ=60.00;MQ0=0;MQRankSum=0.00;POSITIVE_TRAIN_SITE;QD=12.21;ReadPosRankSum=-2.040e-01;SOR=0.556;set=Intersection\tGT:AD:DP:GQ:PL:TP\t0|0:38,0:38:99:0,102,1206:101\t0|1:17,22:39:99:637,0,433:101\t0|1:29,20:49:99:469,0,724:101\nchr1\t932613\t.\tGTTTC\tG\t1335.12\tPASS\tAC=2;AF=0.333;AN=6;BaseQRankSum=1.06;ClippingRankSum=0.00;DP=110;ExcessHet=3.9794;FS=4.398;MQ=60.00;MQ0=0;MQRankSum=0.00;QD=18.04;ReadPosRankSum=0.190;SOR=0.997;set=Intersection\tGT:AD:DP:GQ:PL:TP\t0|0:36,0:36:99:0,99,1145:99\t0|1:17,19:36:99:747,0,721:99\t0|1:21,17:38:99:629,0,1001:99\nchr1\t932949\t.\tA\tC\t3814.90\tPASS\tAC=6;AF=1.00;AN=6;DP=120;ExcessHet=3.0103;FS=0.000;MQ=60.00;MQ0=0;POSITIVE_TRAIN_SITE;QD=31.79;SOR=0.871;set=Intersection\tGT:AD:DP:GQ:PL:TP\t1|1:0,48:48:99:1467,143,0:77\t1|1:0,26:26:78:882,78,0:77\t1|1:0,46:46:99:1492,137,0:77\nchr1\t932976\t.\tC\tT\t2246.16\tPASS\tAC=4;AF=0.667;AN=6;BaseQRankSum=2.74;ClippingRankSum=0.00;DP=118;ExcessHet=3.9794;FS=1.547;MQ=60.00;MQ0=0;MQRankSum=0.00;POSITIVE_TRAIN_SITE;QD=19.04;ReadPosRankSum=0.626;SOR=0.920;set=Intersection\tGT:AD:DP:GQ:PL:TP\t1|1:0,47:47:99:1503,141,0:127\t1|0:18,7:25:99:168,0,440:127\t1|0:24,22:46:99:607,0,600:127\nchr1\t933024\t.\tC\tT\t766.16\tPASS\tAC=2;AF=0.333;AN=6;BaseQRankSum=-1.026e+00;ClippingRankSum=0.00;DP=105;ExcessHet=3.9794;FS=2.124;MQ=60.00;MQ0=0;MQRankSum=0.00;POSITIVE_TRAIN_SITE;QD=12.56;ReadPosRankSum=0.784;SOR=1.034;set=Intersection\tGT:AD:DP:GQ:PL:TP\t0|0:42,0:42:99:0,108,1620:108\t0|1:8,12:22:99:356,0,217:108\t0|1:23,18:41:99:442,0,633:108\nchr1\t933411\t.\tC\tT\t999.16\tPASS\tAC=2;AF=0.333;AN=6;BaseQRankSum=0.415;ClippingRankSum=0.00;DP=108;ExcessHet=3.9794;FS=0.000;MQ=60.00;MQ0=0;MQRankSum=0.00;POSITIVE_TRAIN_SITE;QD=14.07;ReadPosRankSum=0.599;SOR=0.607;set=Intersection\tGT:AD:DP:GQ:PL:TP\t0|0:37,0:37:99:0,100,1152:99\t0|1:11,17:28:99:467,0,253:99\t0|1:21,22:43:99:564,0,524:99\nchr1\t933511\t.\tA\tG\t4079.90\tPASS\tAC=6;AF=1.00;AN=6;DP=127;ExcessHet=3.0103;FS=0.000;MQ=60.00;MQ0=0;POSITIVE_TRAIN_SITE;QD=32.13;SOR=0.774;set=Intersection\tGT:AD:DP:GQ:PL:TP\t1|1:0,51:51:99:1623,153,0:107\t1|1:0,40:40:99:1344,120,0:107\t1|1:0,36:36:99:1139,108,0:107\nchr1\t933548\t.\tA\tAG\t615.12\tPASS\tAC=2;AF=0.333;AN=6;BaseQRankSum=-1.074e+00;ClippingRankSum=0.00;DP=118;ExcessHet=3.9794;FS=15.502;MQ=60.00;MQ0=0;MQRankSum=0.00;POSITIVE_TRAIN_SITE;QD=7.69;ReadPosRankSum=0.165;SOR=0.983;set=Intersection\tGT:AD:DP:GQ:PL:TP\t0|0:38,0:38:99:0,99,1200:99\t0|1:22,24:46:99:385,0,347:99\t0|1:17,17:34:99:271,0,273:99\nchr1\t934601\t.\tC\tT\t942.16\tPASS\tAC=2;AF=0.333;AN=6;BaseQRankSum=1.43;ClippingRankSum=0.00;DP=109;ExcessHet=3.9794;FS=12.166;MQ=60.00;MQ0=0;MQRankSum=0.00;POSITIVE_TRAIN_SITE;QD=12.24;ReadPosRankSum=-5.380e-01;SOR=2.012;set=Intersection\tGT:AD:DP:GQ:PL:TP\t0|0:32,0:32:93:0,93,1395:93\t0|1:22,21:43:99:540,0,607:93\t0|1:18,16:34:99:434,0,463:93\nchr1\t934758\t.\tT\tTG\t265.12\tPASS\tAC=2;AF=0.333;AN=6;BaseQRankSum=-3.150e-01;ClippingRankSum=0.00;DP=114;ExcessHet=3.9794;FS=2.141;MQ=60.00;MQ0=0;MQRankSum=0.00;QD=3.68;ReadPosRankSum=2.34;SOR=1.066;set=Intersection\tGT:AD:DP:GQ:PL:TP\t1|0:42,0:42:77:0,77,1181:76\t0|1:23,14:37:99:181,0,371:76\t0|1:24,11:35:99:125,0,395:76\nchr1\t935523\t.\tT\tC\t1002.16\tPASS\tAC=2;AF=0.333;AN=6;BaseQRankSum=0.520;ClippingRankSum=0.00;DP=109;ExcessHet=3.9794;FS=3.200;MQ=60.00;MQ0=0;MQRankSum=0.00;POSITIVE_TRAIN_SITE;QD=13.92;ReadPosRankSum=0.446;SOR=0.967;set=Intersection\tGT:AD:DP:GQ:PL:TP\t0|0:37,0:37:99:0,105,1086:104\t0|1:18,24:42:99:648,0,499:104\t0|1:16,14:30:99:386,0,446:104\nchr1\t935954\t.\tG\tT\t807.16\tPASS\tAC=2;AF=0.333;AN=6;BaseQRankSum=1.63;ClippingRankSum=0.00;DP=108;ExcessHet=3.9794;FS=6.287;MQ=60.00;MQ0=0;MQRankSum=0.00;POSITIVE_TRAIN_SITE;QD=11.21;ReadPosRankSum=-1.399e+00;SOR=0.497;set=Intersection\tGT:AD:DP:GQ:PL:TP\t0|0:36,0:36:99:0,99,1300:99\t0|1:21,17:38:99:445,0,565:99\t0|1:19,15:34:99:394,0,498:99\nchr1\t938178\t.\tG\tT\t1052.16\tPASS\tAC=2;AF=0.333;AN=6;BaseQRankSum=0.615;ClippingRankSum=0.00;DP=107;ExcessHet=3.9794;FS=0.877;MQ=60.00;MQ0=0;MQRankSum=0.00;POSITIVE_TRAIN_SITE;QD=14.41;ReadPosRankSum=1.81;SOR=0.816;set=Intersection\tGT:AD:DP:GQ:PL:TP\t0|0:34,0:34:99:0,99,1001:99\t0|1:11,13:24:99:344,0,270:99\t0|1:22,27:49:99:740,0,561:99\nchr1\t939779\t.\tAGCCAGTGGACGCCGACCT\tA\t1734.12\tPASS\tAC=2;AF=0.333;AN=6;BaseQRankSum=0.801;ClippingRankSum=0.00;DP=119;ExcessHet=3.9794;FS=0.000;MQ=60.00;MQ0=0;MQRankSum=0.00;QD=20.89;ReadPosRankSum=2.93;SOR=0.721;set=Intersection\tGT:AD:DP:GQ:PL:TP\t0|0:36,0:36:90:0,90,1112:90\t0|1:27,20:47:99:758,0,3830:90\t0|1:11,25:36:99:1017,0,1516:90\nchr1\t940262\t.\tC\tCG\t80.12\tPASS\tAC=1;AF=0.167;AN=6;BaseQRankSum=-1.645e+00;ClippingRankSum=0.00;DP=34;ExcessHet=3.0103;FS=0.000;MQ=60.00;MQ0=0;MQRankSum=0.00;QD=16.02;ReadPosRankSum=0.253;SOR=1.022;set=Intersection\tGT:AD:DP:GQ:PGT:PID:PL:TP\t0|0:19,0:19:22:.:.:0,22,440:21\t0|0:10,0:10:30:.:.:0,30,297:21\t0|1:2,3:5:75:0|1:940256_C_T:120,0,75:21\nchr1\t940263\t.\tC\tG,CG\t186.16\tPASS\tAC=1,1;AF=0.167,0.167;AN=6;BaseQRankSum=1.07;ClippingRankSum=0.00;DP=31;ExcessHet=3.9794;FS=0.000;MQ=60.00;MQ0=0;MQRankSum=0.00;QD=15.51;ReadPosRankSum=0.484;SOR=0.293;set=Intersection\tGT:AD:DP:GQ:PGT:PID:PL\t0/0:19,0,0:19:51:.:.:0,51,765,51,765,765\t0/1:3,4,0:7:53:.:.:98,0,53,107,65,172\t0/2:2,0,3:5:75:0|1:940256_C_T:120,126,210,0,84,75\nchr1\t940296\t.\tGCC\tG\t65.91\tPASS\tAC=1;AF=0.250;AN=4;BaseQRankSum=-5.240e-01;ClippingRankSum=0.00;DP=30;ExcessHet=3.0103;FS=0.000;MQ=47.86;MQ0=0;MQRankSum=0.00;QD=13.18;ReadPosRankSum=-5.240e-01;SOR=0.693;set=Intersection\tGT:AD:DP:GQ:PL:TP\t0|0:21,0:21:28:0,28,500:26\t0|1:1,4:5:15:104,0,15:26\t./.:4,0:4:.:0,0,0\nchr1\t940390\t.\tA\tG\t470.16\tPASS\tAC=2;AF=0.333;AN=6;BaseQRankSum=1.48;ClippingRankSum=0.00;DP=62;ExcessHet=3.9794;FS=4.039;MQ=60.00;MQ0=0;MQRankSum=0.00;QD=12.37;ReadPosRankSum=0.047;SOR=0.202;set=Intersection\tGT:AD:DP:GQ:PL:TP\t0|0:24,0:24:47:0,47,734:47\t0|1:14,6:20:99:149,0,372:47\t0|1:6,12:18:99:353,0,154:47\nchr1\t940820\t.\tG\tC\t159.13\tPASS\tAC=1;AF=0.167;AN=6;BaseQRankSum=3.26;ClippingRankSum=0.00;DP=102;ExcessHet=3.0103;FS=0.000;MQ=60.00;MQ0=0;MQRankSum=0.00;POSITIVE_TRAIN_SITE;QD=3.88;ReadPosRankSum=-1.373e+00;SOR=0.892;set=Intersection\tGT:AD:DP:GQ:PL:TP\t0|0:27,0:27:75:0,75,1125:74\t0|0:34,0:34:99:0,99,1081:74\t0|1:32,9:41:99:190,0,774:74\nchr1\t941119\t.\tA\tG\t533.16\tPASS\tAC=2;AF=0.333;AN=6;BaseQRankSum=0.057;ClippingRankSum=0.00;DP=87;ExcessHet=3.9794;FS=5.572;MQ=60.00;MQ0=0;MQRankSum=0.00;POSITIVE_TRAIN_SITE;QD=9.52;ReadPosRankSum=1.19;SOR=1.034;set=Intersection\tGT:AD:DP:GQ:PL:TP\t0|0:31,0:31:79:0,79,989:79\t0|1:17,13:30:99:316,0,460:79\t0|1:16,10:26:99:249,0,455:79\nchr1\t942335\t.\tC\tG\t869.16\tPASS\tAC=2;AF=0.333;AN=6;BaseQRankSum=0.406;ClippingRankSum=0.00;DP=86;ExcessHet=3.9794;FS=3.665;MQ=60.00;MQ0=0;MQRankSum=0.00;POSITIVE_TRAIN_SITE;QD=14.25;ReadPosRankSum=2.31;SOR=1.270;set=Intersection\tGT:AD:DP:GQ:PL:TP\t0|0:25,0:25:72:0,72,778:72\t0|1:11,16:27:99:384,0,231:72\t0|1:13,21:34:99:517,0,286:72\nchr1\t943526\t.\tCTTT\tC\t897.12\tPASS\tAC=2;AF=0.333;AN=6;BaseQRankSum=0.996;ClippingRankSum=0.00;DP=51;ExcessHet=3.9794;FS=1.505;MQ=68.61;MQ0=0;MQRankSum=0.00;QD=36.27;ReadPosRankSum=-3.860e-01;SOR=0.396;set=Intersection\tGT:AD:DP:GQ:PL:TP\t0|0:6,0:16:3:0,3,107:4\t0|1:1,11:18:35:377,0,35:4\t0|1:1,11:17:20:376,0,20:4\nchr1\t944296\t.\tG\tA\t1602.16\tPASS\tAC=2;AF=0.333;AN=6;BaseQRankSum=0.809;ClippingRankSum=0.00;DP=115;ExcessHet=3.9794;FS=0.864;MQ=60.00;MQ0=0;MQRankSum=0.00;POSITIVE_TRAIN_SITE;QD=19.54;ReadPosRankSum=0.593;SOR=0.858;set=Intersection\tGT:AD:DP:GQ:PGT:PID:PL:TP\t0|0:33,0:33:90:.:.:0,90,1350:90\t0|1:25,29:54:99:0|1:944296_G_A:1108,0,1292:90\t0|1:9,19:28:99:.:.:526,0,178:90\nchr1\t944307\t.\tT\tC\t1562.16\tPASS\tAC=2;AF=0.333;AN=6;BaseQRankSum=2.73;ClippingRankSum=0.00;DP=114;ExcessHet=3.9794;FS=4.260;MQ=60.00;MQ0=0;MQRankSum=0.00;POSITIVE_TRAIN_SITE;QD=19.05;ReadPosRankSum=0.919;SOR=1.179;set=Intersection\tGT:AD:DP:GQ:PGT:PID:PL:TP\t0|0:32,0:32:93:.:.:0,93,1395:93\t0|1:26,30:56:99:0|1:944296_G_A:1118,0,1320:93\t0|1:10,16:26:99:.:.:476,0,206:93\nchr1\t944858\t.\tA\tG\t1028.16\tPASS\tAC=2;AF=0.333;AN=6;BaseQRankSum=-1.940e-01;ClippingRankSum=0.00;DP=119;ExcessHet=3.9794;FS=0.834;MQ=60.00;MQ0=0;MQRankSum=0.00;POSITIVE_TRAIN_SITE;QD=12.69;ReadPosRankSum=-3.380e-01;SOR=0.752;set=Intersection\tGT:AD:DP:GQ:PL:TP\t0|0:38,0:38:99:0,103,1244:103\t0|1:19,16:35:99:404,0,533:103\t0|1:22,24:46:99:656,0,581:103\nchr1\t946247\t.\tG\tA\t971.16\tPASS\tAC=2;AF=0.333;AN=6;BaseQRankSum=-4.490e-01;ClippingRankSum=0.00;DP=106;ExcessHet=3.9794;FS=3.239;MQ=60.00;MQ0=0;MQRankSum=0.00;POSITIVE_TRAIN_SITE;QD=13.68;ReadPosRankSum=0.606;SOR=0.465;set=Intersection\tGT:AD:DP:GQ:PL:TP\t0|0:35,0:35:56:0,56,958:56\t0|1:18,19:37:99:466,0,513:56\t0|1:14,20:34:99:537,0,364:56\nchr1\t947423\t.\tA\tG\t791.16\tPASS\tAC=2;AF=0.333;AN=6;BaseQRankSum=1.09;ClippingRankSum=0.00;DP=102;ExcessHet=3.9794;FS=0.000;MQ=60.00;MQ0=0;MQRankSum=0.00;POSITIVE_TRAIN_SITE;QD=9.89;ReadPosRankSum=0.904;SOR=0.610;set=Intersection\tGT:AD:DP:GQ:PL:TP\t0|0:22,0:22:60:0,60,780:60\t0|1:22,17:39:99:444,0,564:60\t0|1:26,15:41:99:379,0,679:60\nchr1\t948245\t.\tA\tG\t3850.90\tPASS\tAC=6;AF=1.00;AN=6;DP=119;ExcessHet=3.0103;FS=0.000;MQ=60.00;MQ0=0;POSITIVE_TRAIN_SITE;QD=32.36;SOR=0.744;set=Intersection\tGT:AD:DP:GQ:PL:TP\t1|1:0,44:44:99:1439,132,0:109\t1|1:0,38:38:99:1239,114,0:109\t1|1:0,37:37:99:1199,111,0:109\nchr1\t948711\t.\tC\tCACCCTGGTCCCCCTGGTCCCTTTGGCCCTGCACCTGGCTGG\t2397.12\tPASS\tAC=2;AF=0.333;AN=6;BaseQRankSum=-9.250e-01;ClippingRankSum=0.00;DP=128;ExcessHet=3.9794;FS=0.790;MQ=60.00;MQ0=0;MQRankSum=0.00;QD=25.50;ReadPosRankSum=0.766;SOR=0.676;set=Intersection\tGT:AD:DP:GQ:PL:TP\t0|0:34,0:34:93:0,93,1395:93\t0|1:29,32:61:99:1325,0,2656:93\t0|1:9,24:33:99:1113,0,1340:93\nchr1\t949046\t.\tA\tAACAGCAAAG\t1440.12\tPASS\tAC=2;AF=0.333;AN=6;BaseQRankSum=0.834;ClippingRankSum=0.00;DP=102;ExcessHet=3.9794;FS=2.007;MQ=60.00;MQ0=0;MQRankSum=0.00;QD=20.57;ReadPosRankSum=0.727;SOR=1.022;set=Intersection\tGT:AD:DP:GQ:PL:TP\t0|0:32,0:32:93:0,93,1395:93\t0|1:18,17:35:99:642,0,1613:93\t0|1:14,21:35:99:839,0,1204:93\nchr1\t949171\t.\tGAGAA\tG\t844.12\tPASS\tAC=2;AF=0.333;AN=6;BaseQRankSum=0.796;ClippingRankSum=0.00;DP=108;ExcessHet=3.9794;FS=10.348;MQ=60.00;MQ0=0;MQRankSum=0.00;QD=11.41;ReadPosRankSum=1.86;SOR=0.929;set=Intersection\tGT:AD:DP:GQ:PL:TP\t0|0:34,0:34:99:0,99,1152:99\t0|1:30,11:41:99:372,0,1496:99\t0|1:19,14:33:99:513,0,915:99\nchr1\t949387\t.\tG\tA\t387.13\tPASS\tAC=1;AF=0.167;AN=6;BaseQRankSum=-1.008e+00;ClippingRankSum=0.00;DP=103;ExcessHet=3.0103;FS=2.987;MQ=60.00;MQ0=0;MQRankSum=0.00;POSITIVE_TRAIN_SITE;QD=10.75;ReadPosRankSum=0.165;SOR=0.478;set=Intersection\tGT:AD:DP:GQ:PL:TP\t0|0:37,0:37:99:0,108,1296:89\t0|0:30,0:30:90:0,90,852:89\t0|1:19,17:36:99:418,0,523:89\nchr1\t949435\t.\tA\tG\t573.16\tPASS\tAC=2;AF=0.333;AN=6;BaseQRankSum=-2.080e-01;ClippingRankSum=0.00;DP=111;ExcessHet=3.9794;FS=0.903;MQ=60.00;MQ0=0;MQRankSum=0.00;POSITIVE_TRAIN_SITE;QD=7.64;ReadPosRankSum=0.496;SOR=0.551;set=Intersection\tGT:AD:DP:GQ:PL:TP\t0|0:36,0:36:99:0,100,1201:99\t0|1:26,13:39:99:273,0,676:99\t0|1:21,15:36:99:332,0,566:99\nchr1\t950296\t.\tC\tA\t1942.16\tPASS\tAC=2;AF=0.333;AN=6;BaseQRankSum=0.283;ClippingRankSum=0.00;DP=118;ExcessHet=3.9794;FS=2.850;MQ=60.00;MQ0=0;MQRankSum=0.00;QD=22.32;ReadPosRankSum=0.375;SOR=0.660;set=Intersection\tGT:AD:DP:GQ:PGT:PID:PL:TP\t0|0:31,0:31:90:.:.:0,90,1350:90\t0|1:14,18:32:99:0|1:950296_C_A:744,0,1138:90\t0|1:24,31:55:99:0|1:950296_C_A:1230,0,2113:90\nchr1\t950309\t.\tG\tA\t1905.16\tPASS\tAC=2;AF=0.333;AN=6;BaseQRankSum=0.867;ClippingRankSum=0.00;DP=120;ExcessHet=3.9794;FS=1.784;MQ=60.00;MQ0=0;MQRankSum=0.00;QD=22.68;ReadPosRankSum=0.548;SOR=0.504;set=Intersection\tGT:AD:DP:GQ:PGT:PID:PL:TP\t0|0:36,0:36:90:.:.:0,90,1122:90\t0|1:13,18:31:99:0|1:950296_C_A:715,0,1154:90\t0|1:23,30:53:99:0|1:950296_C_A:1222,0,2084:90\nchr1\t950319\t.\tA\tG\t1872.16\tPASS\tAC=2;AF=0.333;AN=6;BaseQRankSum=-2.672e+00;ClippingRankSum=0.00;DP=124;ExcessHet=3.9794;FS=1.770;MQ=60.00;MQ0=0;MQRankSum=0.00;QD=21.77;ReadPosRankSum=0.798;SOR=0.498;set=Intersection\tGT:AD:DP:GQ:PGT:PID:PL:TP\t0|0:38,0:38:65:.:.:0,65,1122:65\t0|1:13,19:32:99:0|1:950296_C_A:737,0,1151:65\t0|1:24,30:54:99:0|1:950296_C_A:1167,0,2072:65\nchr1\t950502\t.\tGAC\tG\t2163.12\tPASS\tAC=4;AF=0.667;AN=6;BaseQRankSum=0.132;ClippingRankSum=0.00;DP=125;ExcessHet=3.9794;FS=2.317;MQ=60.00;MQ0=0;MQRankSum=0.00;QD=17.30;ReadPosRankSum=-1.146e+00;SOR=0.956;set=Intersection\tGT:AD:DP:GQ:PL:TP\t1|1:0,37:37:99:1276,111,0:110\t1|0:26,15:41:99:386,0,764:110\t1|0:27,20:47:99:542,0,783:110\nchr1\t950626\t.\tT\tC\t1468.16\tPASS\tAC=2;AF=0.333;AN=6;BaseQRankSum=1.43;ClippingRankSum=0.00;DP=136;ExcessHet=3.9794;FS=3.769;MQ=60.00;MQ0=0;MQRankSum=0.00;QD=14.83;ReadPosRankSum=0.711;SOR=0.461;set=Intersection\tGT:AD:DP:GQ:PL:TP\t0|0:37,0:37:99:0,100,1181:99\t0|1:20,28:48:99:789,0,499:99\t0|1:26,25:51:99:711,0,723:99\nchr1\t950669\t.\tACAG\tA\t1967.12\tPASS\tAC=2;AF=0.333;AN=6;BaseQRankSum=0.251;ClippingRankSum=0.00;DP=125;ExcessHet=3.9794;FS=2.876;MQ=60.00;MQ0=0;MQRankSum=0.00;QD=22.35;ReadPosRankSum=-3.290e-01;SOR=0.694;set=Intersection\tGT:AD:DP:GQ:PL:TP\t0|0:37,0:37:99:0,100,1181:99\t0|1:15,23:38:99:902,0,589:99\t0|1:21,29:50:99:1106,0,837:99\nchr1\t950799\t.\tCA\tC\t2308.12\tPASS\tAC=2;AF=0.333;AN=6;BaseQRankSum=0.024;ClippingRankSum=0.00;DP=107;ExcessHet=3.9794;FS=0.886;MQ=60.00;MQ0=0;MQRankSum=0.00;POSITIVE_TRAIN_SITE;QD=27.48;ReadPosRankSum=0.735;SOR=0.515;set=Intersection\tGT:AD:DP:GQ:PGT:PID:PL:TP\t0|0:23,0:23:60:.:.:0,60,900:60\t0|1:13,26:39:99:0|1:950799_CA_C:1092,0,1156:60\t0|1:15,30:45:99:0|1:950799_CA_C:1257,0,899:60\nchr1\t950802\t.\tTG\tT\t2305.12\tPASS\tAC=2;AF=0.333;AN=6;BaseQRankSum=0.748;ClippingRankSum=0.00;DP=110;ExcessHet=3.9794;FS=0.865;MQ=60.00;MQ0=0;MQRankSum=0.00;POSITIVE_TRAIN_SITE;QD=26.50;ReadPosRankSum=-1.507e+00;SOR=0.520;set=Intersection\tGT:AD:DP:GQ:PGT:PID:PL:TP\t0|0:23,0:23:60:.:.:0,60,900:60\t0|1:14,27:41:99:0|1:950799_CA_C:1089,0,1189:60\t0|1:15,31:46:99:0|1:950799_CA_C:1257,0,899:60\nchr1\t950806\t.\tC\tCAG\t2305.12\tPASS\tAC=2;AF=0.333;AN=6;BaseQRankSum=0.686;ClippingRankSum=0.00;DP=109;ExcessHet=3.9794;FS=0.000;MQ=60.00;MQ0=0;MQRankSum=0.00;QD=26.80;ReadPosRankSum=-1.275e+00;SOR=0.669;set=Intersection\tGT:AD:DP:GQ:PGT:PID:PL:TP\t0|0:23,0:23:60:.:.:0,60,900:60\t0|1:14,26:40:99:0|1:950799_CA_C:1089,0,1189:60\t0|1:15,31:46:99:0|1:950799_CA_C:1257,0,899:60\nchr1\t951408\t.\tG\tA\t840.16\tPASS\tAC=2;AF=0.333;AN=6;BaseQRankSum=0.815;ClippingRankSum=0.00;DP=101;ExcessHet=3.9794;FS=0.988;MQ=60.00;MQ0=0;MQRankSum=0.00;POSITIVE_TRAIN_SITE;QD=12.00;ReadPosRankSum=0.950;SOR=0.481;set=Intersection\tGT:AD:DP:GQ:PL:TP\t0|0:31,0:31:90:0,90,936:90\t0|1:15,15:30:99:419,0,431:90\t0|1:23,17:40:99:453,0,619:90\nchr1\t951437\t.\tC\tT\t741.16\tPASS\tAC=2;AF=0.333;AN=6;BaseQRankSum=-1.346e+00;ClippingRankSum=0.00;DP=100;ExcessHet=3.9794;FS=0.000;MQ=60.00;MQ0=0;MQRankSum=0.00;QD=10.90;ReadPosRankSum=0.901;SOR=0.620;set=Intersection\tGT:AD:DP:GQ:PL:TP\t0|0:32,0:32:84:0,84,1038:84\t0|1:15,16:31:99:428,0,428:84\t0|1:23,14:37:99:345,0,671:84\nchr1\t952180\t.\tA\tC\t988.16\tPASS\tAC=2;AF=0.333;AN=6;BaseQRankSum=0.126;ClippingRankSum=0.00;DP=105;ExcessHet=3.9794;FS=2.000;MQ=60.00;MQ0=0;MQRankSum=0.00;POSITIVE_TRAIN_SITE;QD=14.53;ReadPosRankSum=0.790;SOR=0.471;set=Intersection\tGT:AD:DP:GQ:PL:TP\t0|0:37,0:37:99:0,99,1485:99\t0|1:13,24:37:99:682,0,330:99\t0|1:18,13:31:99:338,0,502:99\nchr1\t952421\t.\tA\tG\t1135.16\tPASS\tAC=2;AF=0.333;AN=6;BaseQRankSum=0.643;ClippingRankSum=0.00;DP=103;ExcessHet=3.9794;FS=4.577;MQ=60.00;MQ0=0;MQRankSum=0.00;POSITIVE_TRAIN_SITE;QD=15.34;ReadPosRankSum=1.30;SOR=1.057;set=Intersection\tGT:AD:DP:GQ:PL:TP\t0|0:29,0:29:81:0,81,928:81\t0|1:18,28:46:99:775,0,442:81\t0|1:14,14:28:99:392,0,382:81\nchr1\t953259\t.\tT\tC\t1365.16\tPASS\tAC=2;AF=0.333;AN=6;BaseQRankSum=1.17;ClippingRankSum=0.00;DP=119;ExcessHet=3.9794;FS=1.798;MQ=60.00;MQ0=0;MQRankSum=0.00;POSITIVE_TRAIN_SITE;QD=16.06;ReadPosRankSum=2.28;SOR=0.720;set=Intersection\tGT:AD:DP:GQ:PL:TP\t0|0:34,0:34:90:0,90,1350:90\t0|1:21,23:44:99:596,0,511:90\t0|1:13,28:41:99:801,0,303:90\nchr1\t953279\t.\tT\tC\t1268.16\tPASS\tAC=2;AF=0.333;AN=6;BaseQRankSum=-4.640e-01;ClippingRankSum=0.00;DP=113;ExcessHet=3.9794;FS=0.000;MQ=60.00;MQ0=0;MQRankSum=0.00;POSITIVE_TRAIN_SITE;QD=16.26;ReadPosRankSum=2.06;SOR=0.678;set=Intersection\tGT:AD:DP:GQ:PL:TP\t0|0:35,0:35:99:0,99,1196:99\t0|1:17,23:40:99:639,0,450:99\t0|1:14,24:38:99:661,0,323:99\nchr1\t953778\t.\tG\tC\t1367.16\tPASS\tAC=2;AF=0.333;AN=6;BaseQRankSum=4.28;ClippingRankSum=0.00;DP=95;ExcessHet=3.9794;FS=8.581;MQ=60.00;MQ0=0;MQRankSum=0.00;POSITIVE_TRAIN_SITE;QD=21.03;ReadPosRankSum=1.03;SOR=1.055;set=Intersection\tGT:AD:DP:GQ:PGT:PID:PL:TP\t0|0:30,0:30:84:.:.:0,84,1260:84\t0|1:18,21:39:99:0|1:953778_G_C:802,0,941:84\t0|1:11,15:26:99:0|1:953778_G_C:597,0,590:84\nchr1\t953779\t.\tA\tC\t1367.16\tPASS\tAC=2;AF=0.333;AN=6;BaseQRankSum=0.894;ClippingRankSum=0.00;DP=95;ExcessHet=3.9794;FS=8.581;MQ=60.00;MQ0=0;MQRankSum=0.00;POSITIVE_TRAIN_SITE;QD=21.03;ReadPosRankSum=1.03;SOR=1.055;set=Intersection\tGT:AD:DP:GQ:PGT:PID:PL:TP\t0|0:30,0:30:84:.:.:0,84,1260:84\t0|1:18,21:39:99:0|1:953778_G_C:802,0,941:84\t0|1:11,15:26:99:0|1:953778_G_C:597,0,590:84\nchr1\t954258\t.\tG\tC\t897.16\tPASS\tAC=2;AF=0.333;AN=6;BaseQRankSum=0.00;ClippingRankSum=0.00;DP=113;ExcessHet=3.9794;FS=0.000;MQ=60.00;MQ0=0;MQRankSum=0.00;POSITIVE_TRAIN_SITE;QD=12.12;ReadPosRankSum=-2.680e-01;SOR=0.704;set=Intersection\tGT:AD:DP:GQ:PL:TP\t0|0:39,0:39:99:0,105,1320:104\t0|1:13,20:33:99:550,0,333:104\t0|1:26,15:41:99:379,0,721:104\nchr1\t954333\t.\tC\tA\t389.16\tPASS\tAC=2;AF=0.333;AN=6;BaseQRankSum=2.47;ClippingRankSum=0.00;DP=104;ExcessHet=3.9794;FS=5.297;MQ=60.00;MQ0=0;MQRankSum=0.00;POSITIVE_TRAIN_SITE;QD=5.56;ReadPosRankSum=0.087;SOR=0.861;set=Intersection\tGT:AD:DP:GQ:PL:TP\t0|0:34,0:34:67:0,67,891:67\t0|1:23,10:33:99:239,0,544:67\t0|1:28,9:37:99:182,0,710:67\nchr1\t955641\t.\tG\tA\t820.16\tPASS\tAC=2;AF=0.333;AN=6;BaseQRankSum=0.104;ClippingRankSum=0.00;DP=99;ExcessHet=3.9794;FS=0.000;MQ=60.00;MQ0=0;MQRankSum=0.00;POSITIVE_TRAIN_SITE;QD=12.06;ReadPosRankSum=2.16;SOR=0.588;set=Intersection\tGT:AD:DP:GQ:PL:TP\t0|0:31,0:31:90:0,90,1350:90\t0|1:18,16:34:99:374,0,487:90\t0|1:16,18:34:99:478,0,423:90\nchr1\t955679\t.\tC\tT\t920.16\tPASS\tAC=2;AF=0.333;AN=6;BaseQRankSum=-1.201e+00;ClippingRankSum=0.00;DP=100;ExcessHet=3.9794;FS=0.000;MQ=60.00;MQ0=0;MQRankSum=0.00;POSITIVE_TRAIN_SITE;QD=13.94;ReadPosRankSum=0.109;SOR=0.654;set=Intersection\tGT:AD:DP:GQ:PL:TP\t0|0:34,0:34:99:0,102,941:101\t0|1:14,15:29:99:369,0,371:101\t0|1:15,22:37:99:583,0,381:101\nchr1\t956565\t.\tA\tG\t966.16\tPASS\tAC=2;AF=0.333;AN=6;BaseQRankSum=-1.324e+00;ClippingRankSum=0.00;DP=99;ExcessHet=3.9794;FS=3.154;MQ=60.00;MQ0=0;MQRankSum=0.00;POSITIVE_TRAIN_SITE;QD=13.06;ReadPosRankSum=0.535;SOR=1.096;set=Intersection\tGT:AD:DP:GQ:PL:TP\t0|0:25,0:25:75:0,75,788:75\t0|1:15,18:33:99:428,0,382:75\t0|1:17,24:41:99:570,0,447:75\nchr1\t957365\t.\tG\tA\t902.16\tPASS\tAC=2;AF=0.333;AN=6;BaseQRankSum=1.16;ClippingRankSum=0.00;DP=105;ExcessHet=3.9794;FS=3.288;MQ=60.00;MQ0=0;MQRankSum=0.00;POSITIVE_TRAIN_SITE;QD=13.07;ReadPosRankSum=0.811;SOR=0.372;set=Intersection\tGT:AD:DP:GQ:PL:TP\t0|0:36,0:36:73:0,73,1101:73\t0|1:15,18:33:99:506,0,382:73\t0|1:19,17:36:99:428,0,512:73\nchr1\t957814\t.\tG\tC\t423.13\tPASS\tAC=1;AF=0.167;AN=6;BaseQRankSum=2.75;ClippingRankSum=0.00;DP=113;ExcessHet=3.0103;FS=7.610;MQ=60.00;MQ0=0;MQRankSum=0.00;POSITIVE_TRAIN_SITE;QD=11.44;ReadPosRankSum=-2.830e-01;SOR=2.179;set=Intersection\tGT:AD:DP:GQ:PL:TP\t0|0:38,0:38:99:0,114,1090:98\t0|1:20,17:37:99:454,0,459:98\t0|0:38,0:38:99:0,99,1121:98\nchr1\t957900\t.\tG\tA\t1116.16\tPASS\tAC=2;AF=0.333;AN=6;BaseQRankSum=2.14;ClippingRankSum=0.00;DP=108;ExcessHet=3.9794;FS=4.576;MQ=60.00;MQ0=0;MQRankSum=0.00;POSITIVE_TRAIN_SITE;QD=15.08;ReadPosRankSum=1.14;SOR=1.143;set=Intersection\tGT:AD:DP:GQ:PL:TP\t0|0:34,0:34:99:0,99,1046:99\t0|1:11,20:31:99:557,0,229:99\t0|1:20,23:43:99:591,0,451:99\nchr1\t958339\t.\tG\tA\t935.16\tPASS\tAC=2;AF=0.333;AN=6;BaseQRankSum=4.28;ClippingRankSum=0.00;DP=94;ExcessHet=3.9794;FS=2.280;MQ=60.00;MQ0=0;MQRankSum=0.00;POSITIVE_TRAIN_SITE;QD=15.59;ReadPosRankSum=-1.410e-01;SOR=1.150;set=Intersection\tGT:AD:DP:GQ:PL:TP\t0|0:34,0:34:99:0,99,1485:99\t0|1:13,22:35:99:620,0,197:99\t0|1:11,14:25:99:347,0,217:99\nchr1\t959193\t.\tG\tA\t903.16\tPASS\tAC=2;AF=0.333;AN=6;BaseQRankSum=2.03;ClippingRankSum=0.00;DP=100;ExcessHet=3.9794;FS=3.367;MQ=60.00;MQ0=0;MQRankSum=0.00;POSITIVE_TRAIN_SITE;QD=13.48;ReadPosRankSum=1.71;SOR=0.356;set=Intersection\tGT:AD:DP:GQ:PL:TP\t0|0:33,0:33:99:0,99,1006:99\t0|1:14,19:33:99:501,0,314:99\t0|1:18,16:34:99:434,0,443:99\nchr1\t959510\t.\tA\tAAGAC\t1414.12\tPASS\tAC=2;AF=0.333;AN=6;BaseQRankSum=0.769;ClippingRankSum=0.00;DP=81;ExcessHet=3.9794;FS=2.296;MQ=60.00;MQ0=0;MQRankSum=0.00;QD=24.38;ReadPosRankSum=0.162;SOR=0.807;set=Intersection\tGT:AD:DP:GQ:PL:TP\t0|0:23,0:23:55:0,55,730:55\t0|1:12,19:31:99:761,0,507:55\t0|1:10,17:27:99:694,0,443:55\nchr1\t960326\t.\tG\tA\t289.16\tPASS\tAC=2;AF=0.333;AN=6;BaseQRankSum=0.674;ClippingRankSum=0.00;DP=53;ExcessHet=3.9794;FS=11.090;MQ=60.00;MQ0=0;MQRankSum=0.00;POSITIVE_TRAIN_SITE;QD=12.05;ReadPosRankSum=-1.131e+00;SOR=0.042;set=Intersection\tGT:AD:DP:GQ:PL:TP\t0|0:29,0:29:81:0,81,1215:80\t0|1:5,5:10:99:143,0,136:80\t0|1:6,8:14:99:178,0,157:80\nchr1\t960375\t.\tA\tAG\t87.10\tPASS\tAC=2;AF=0.333;AN=6;BaseQRankSum=2.22;ClippingRankSum=0.00;DP=42;ExcessHet=5.4407;FS=2.207;MQ=59.14;MQ0=0;MQRankSum=0.00;QD=3.48;ReadPosRankSum=1.53;SOR=0.250;set=Intersection\tGT:AD:DP:GQ:PL:TP\t0|0:17,0:17:0:0,0,266:3\t0|1:9,4:13:50:50,0,142:3\t0|1:7,5:12:74:74,0,118:3\nchr1\t961096\t.\tA\tG\t285.09\tPASS\tAC=2;AF=0.333;AN=6;BaseQRankSum=0.026;ClippingRankSum=0.00;DP=47;ExcessHet=3.9794;FS=0.000;MQ=60.00;MQ0=0;MQRankSum=0.00;POSITIVE_TRAIN_SITE;QD=10.18;ReadPosRankSum=-5.660e-01;SOR=0.693;set=Intersection\tGT:AD:DP:GQ:PL:TP\t0|0:19,0:19:8:0,8,461:8\t0|1:9,4:13:69:69,0,213:8\t0|1:5,10:15:99:247,0,119:8\nchr1\t961945\t.\tG\tC\t821.16\tPASS\tAC=2;AF=0.333;AN=6;BaseQRankSum=2.54;ClippingRankSum=0.00;DP=103;ExcessHet=3.9794;FS=8.014;MQ=60.00;MQ0=0;MQRankSum=0.00;POSITIVE_TRAIN_SITE;QD=10.80;ReadPosRankSum=2.11;SOR=0.222;set=Intersection\tGT:AD:DP:GQ:PL:TP\t0|0:27,0:27:75:0,75,1125:75\t0|1:18,19:37:99:464,0,365:75\t0|1:22,17:39:99:389,0,482:75\nchr1\t962184\t.\tT\tC\t695.16\tPASS\tAC=2;AF=0.333;AN=6;BaseQRankSum=0.268;ClippingRankSum=0.00;DP=88;ExcessHet=3.9794;FS=7.247;MQ=60.00;MQ0=0;MQRankSum=0.00;POSITIVE_TRAIN_SITE;QD=11.99;ReadPosRankSum=0.109;SOR=1.000;set=Intersection\tGT:AD:DP:GQ:PL:TP\t0|0:30,0:30:90:0,90,1013:90\t0|1:14,15:29:99:391,0,389:90\t0|1:16,13:29:99:336,0,438:90\nchr1\t962358\t.\tC\tT\t2304.16\tPASS\tAC=4;AF=0.667;AN=6;BaseQRankSum=-3.270e-01;ClippingRankSum=0.00;DP=121;ExcessHet=3.9794;FS=0.000;MQ=60.00;MQ0=0;MQRankSum=0.00;POSITIVE_TRAIN_SITE;QD=19.04;ReadPosRankSum=0.873;SOR=0.700;set=Intersection\tGT:AD:DP:GQ:PL:TP\t1|1:1,34:35:71:1096,71,0:71\t1|0:19,24:43:99:655,0,469:71\t1|0:21,22:43:99:585,0,555:71\nchr1\t962943\t.\tT\tC\t941.16\tPASS\tAC=2;AF=0.333;AN=6;BaseQRankSum=1.64;ClippingRankSum=0.00;DP=100;ExcessHet=3.9794;FS=2.038;MQ=60.00;MQ0=0;MQRankSum=0.00;POSITIVE_TRAIN_SITE;QD=14.05;ReadPosRankSum=0.381;SOR=0.481;set=Intersection\tGT:AD:DP:GQ:PL:TP\t0|0:33,0:33:90:0,90,1350:90\t0|1:12,20:32:99:542,0,276:90\t0|1:19,16:35:99:431,0,485:90\nchr1\t964228\t.\tC\tT\t1838.16\tPASS\tAC=4;AF=0.667;AN=6;BaseQRankSum=-1.560e-01;ClippingRankSum=0.00;DP=119;ExcessHet=3.9794;FS=0.000;MQ=60.00;MQ0=0;MQRankSum=0.00;QD=15.45;ReadPosRankSum=-9.330e-01;SOR=0.702;set=Intersection\tGT:AD:DP:GQ:PGT:PID:PL:TP\t1|1:0,35:35:99:.:.:1136,105,0:104\t1|0:24,8:32:99:.:.:162,0,718:104\t1|0:29,23:52:99:0|1:964228_C_T:572,0,810:104\nchr1\t964548\t.\tG\tC\t1078.16\tPASS\tAC=2;AF=0.333;AN=6;BaseQRankSum=-5.950e-01;ClippingRankSum=0.00;DP=78;ExcessHet=3.9794;FS=5.110;MQ=60.00;MQ0=0;MQRankSum=0.00;QD=25.07;ReadPosRankSum=0.498;SOR=0.193;set=Intersection\tGT:AD:DP:GQ:PGT:PID:PL:TP\t0|0:35,0:35:80:.:.:0,80,1027:80\t0|1:4,10:14:99:0|1:964548_G_C:388,0,464:80\t0|1:11,18:29:99:0|1:964548_G_C:722,0,1691:80\nchr1\t964557\t.\tG\tT\t1078.16\tPASS\tAC=2;AF=0.333;AN=6;BaseQRankSum=0.949;ClippingRankSum=0.00;DP=77;ExcessHet=3.9794;FS=5.147;MQ=60.00;MQ0=0;MQRankSum=0.00;QD=25.67;ReadPosRankSum=1.29;SOR=0.174;set=Intersection\tGT:AD:DP:GQ:PGT:PID:PL:TP\t0|0:35,0:35:70:.:.:0,70,995:70\t0|1:4,9:13:99:0|1:964548_G_C:388,0,464:70\t0|1:11,18:29:99:0|1:964548_G_C:722,0,1691:70\nchr1\t964558\t.\tG\tC\t1056.16\tPASS\tAC=2;AF=0.333;AN=6;BaseQRankSum=1.77;ClippingRankSum=0.00;DP=76;ExcessHet=3.9794;FS=5.147;MQ=60.00;MQ0=0;MQRankSum=0.00;QD=25.15;ReadPosRankSum=1.29;SOR=0.174;set=Intersection\tGT:AD:DP:GQ:PGT:PID:PL:TP\t0|0:34,0:34:87:.:.:0,87,1305:87\t0|1:4,9:13:99:0|1:964548_G_C:366,0,467:87\t0|1:11,18:29:99:0|1:964548_G_C:722,0,1691:87\nchr1\t964562\t.\tG\tA\t966.16\tPASS\tAC=2;AF=0.333;AN=6;BaseQRankSum=1.24;ClippingRankSum=0.00;DP=70;ExcessHet=3.9794;FS=5.172;MQ=60.00;MQ0=0;MQRankSum=0.00;QD=24.77;ReadPosRankSum=1.45;SOR=0.211;set=Intersection\tGT:AD:DP:GQ:PGT:PID:PL:TP\t0|0:31,0:31:84:.:.:0,84,1260:84\t0|1:4,9:13:99:0|1:964548_G_C:366,0,467:84\t0|1:10,16:26:99:0|1:964548_G_C:632,0,1893:84\nchr1\t964905\t.\tC\tT\t1160.16\tPASS\tAC=2;AF=0.333;AN=6;BaseQRankSum=-3.240e-01;ClippingRankSum=0.00;DP=100;ExcessHet=3.9794;FS=0.000;MQ=60.00;MQ0=0;MQRankSum=0.00;POSITIVE_TRAIN_SITE;QD=18.42;ReadPosRankSum=0.500;SOR=0.646;set=Intersection\tGT:AD:DP:GQ:PGT:PID:PL:TP\t0|0:37,0:37:99:.:.:0,99,1155:99\t0|1:22,15:37:99:0|1:964905_C_T:550,0,1233:99\t0|1:10,16:26:99:0|1:964905_C_T:642,0,574:99\nchr1\t964906\t.\tA\tG\t1160.16\tPASS\tAC=2;AF=0.333;AN=6;BaseQRankSum=0.137;ClippingRankSum=0.00;DP=101;ExcessHet=3.9794;FS=0.000;MQ=60.00;MQ0=0;MQRankSum=0.00;POSITIVE_TRAIN_SITE;QD=18.13;ReadPosRankSum=0.500;SOR=0.602;set=Intersection\tGT:AD:DP:GQ:PGT:PID:PL:TP\t0|0:37,0:37:99:.:.:0,99,1155:99\t0|1:23,15:38:99:0|1:964905_C_T:550,0,1233:99\t0|1:10,16:26:99:0|1:964905_C_T:642,0,574:99\nchr1\t964918\t.\tC\tG\t288.13\tPASS\tAC=1;AF=0.167;AN=6;BaseQRankSum=-2.085e+00;ClippingRankSum=0.00;DP=103;ExcessHet=3.0103;FS=6.276;MQ=60.00;MQ0=0;MQRankSum=0.00;QD=10.67;ReadPosRankSum=-1.008e+00;SOR=0.141;set=Intersection\tGT:AD:DP:GQ:PGT:PID:PL:TP\t0|0:37,0:37:99:.:.:0,99,1155:98\t0|0:39,0:39:99:.:.:0,108,1185:98\t0|1:12,15:27:99:0|1:964905_C_T:319,0,945:98\nchr1\t965337\t.\tCTTAT\tC\t1486.12\tPASS\tAC=2;AF=0.333;AN=6;BaseQRankSum=-2.170e-01;ClippingRankSum=0.00;DP=120;ExcessHet=3.9794;FS=1.800;MQ=60.00;MQ0=0;MQRankSum=0.00;POSITIVE_TRAIN_SITE;QD=17.91;ReadPosRankSum=1.42;SOR=0.968;set=Intersection\tGT:AD:DP:GQ:PGT:PID:PL:TP\t0|0:37,0:37:99:.:.:0,99,1152:99\t0|1:14,18:32:99:.:.:704,0,764:99\t0|1:30,21:51:99:0|1:965337_CTTAT_C:823,0,1322:99\nchr1\t965350\t.\tG\tA\t1588.16\tPASS\tAC=2;AF=0.333;AN=6;BaseQRankSum=0.330;ClippingRankSum=0.00;DP=135;ExcessHet=3.9794;FS=0.000;MQ=60.00;MQ0=0;MQRankSum=0.00;POSITIVE_TRAIN_SITE;QD=18.47;ReadPosRankSum=0.762;SOR=0.788;set=Intersection\tGT:AD:DP:GQ:PGT:PID:PL:TP\t0|0:49,0:49:98:.:.:0,98,1505:97\t0|1:16,19:35:99:.:.:740,0,392:97\t0|1:27,24:51:99:0|1:965337_CTTAT_C:880,0,1296:97\nchr1\t965592\t.\tT\tG\t1045.16\tPASS\tAC=2;AF=0.333;AN=6;BaseQRankSum=0.771;ClippingRankSum=0.00;DP=128;ExcessHet=3.9794;FS=8.959;MQ=60.00;MQ0=0;MQRankSum=0.00;POSITIVE_TRAIN_SITE;QD=12.15;ReadPosRankSum=-1.460e-01;SOR=1.598;set=Intersection\tGT:AD:DP:GQ:PL:TP\t0|0:42,0:42:57:0,57,1261:57\t0|1:19,15:34:99:387,0,498:57\t0|1:26,26:52:99:690,0,682:57\nchr1\t965643\t.\tT\tC\t770.16\tPASS\tAC=2;AF=0.333;AN=6;BaseQRankSum=-2.182e+00;ClippingRankSum=0.00;DP=124;ExcessHet=3.9794;FS=13.515;MQ=60.00;MQ0=0;MQRankSum=0.00;POSITIVE_TRAIN_SITE;QD=9.63;ReadPosRankSum=1.13;SOR=1.611;set=Intersection\tGT:AD:DP:GQ:PL:TP\t0|0:44,0:44:97:0,97,1380:97\t0|1:18,16:34:99:315,0,424:97\t0|1:24,22:46:99:487,0,649:97\nchr1\t966179\t.\tG\tA\t665.16\tPASS\tAC=2;AF=0.333;AN=6;BaseQRankSum=3.12;ClippingRankSum=0.00;DP=90;ExcessHet=3.9794;FS=0.943;MQ=60.00;MQ0=0;MQRankSum=0.00;POSITIVE_TRAIN_SITE;QD=10.08;ReadPosRankSum=-8.540e-01;SOR=0.504;set=Intersection\tGT:AD:DP:GQ:PL:TP\t0|0:24,0:24:63:0,63,945:63\t0|1:15,15:30:99:325,0,342:63\t0|1:21,15:36:99:372,0,457:63\nchr1\t966227\t.\tC\tG\t702.16\tPASS\tAC=2;AF=0.333;AN=6;BaseQRankSum=0.616;ClippingRankSum=0.00;DP=93;ExcessHet=3.9794;FS=3.131;MQ=60.00;MQ0=0;MQRankSum=0.00;POSITIVE_TRAIN_SITE;QD=9.62;ReadPosRankSum=-9.860e-01;SOR=0.407;set=Intersection\tGT:AD:DP:GQ:PL:TP\t0|0:20,0:20:57:0,57,855:57\t0|1:18,16:34:99:328,0,372:57\t0|1:21,18:39:99:406,0,481:57\nchr1\t966272\t.\tA\tG\t3574.90\tPASS\tAC=6;AF=1.00;AN=6;DP=109;ExcessHet=3.0103;FS=0.000;MQ=60.00;MQ0=0;POSITIVE_TRAIN_SITE;QD=32.80;SOR=0.912;set=Intersection\tGT:AD:DP:GQ:PL:TP\t1|1:0,24:24:72:833,72,0:122\t1|1:0,41:41:99:1333,123,0:122\t1|1:0,44:44:99:1435,132,0:122\nchr1\t967384\t.\tC\tG\t945.16\tPASS\tAC=2;AF=0.333;AN=6;BaseQRankSum=-1.755e+00;ClippingRankSum=0.00;DP=86;ExcessHet=3.9794;FS=14.256;MQ=60.00;MQ0=0;MQRankSum=0.00;QD=15.75;ReadPosRankSum=1.77;SOR=0.315;set=Intersection\tGT:AD:DP:GQ:PGT:PID:PL:TP\t0|0:26,0:26:66:.:.:0,66,990:66\t0|1:16,17:33:99:0|1:967376_AC_A:550,0,575:66\t0|1:8,19:27:99:.:.:427,0,302:66\nchr1\t967617\t.\tG\tA\t1005.16\tPASS\tAC=2;AF=0.333;AN=6;BaseQRankSum=-2.050e-01;ClippingRankSum=0.00;DP=110;ExcessHet=3.9794;FS=16.125;MQ=60.00;MQ0=0;MQRankSum=0.00;POSITIVE_TRAIN_SITE;QD=13.23;ReadPosRankSum=0.573;SOR=1.013;set=Intersection\tGT:AD:DP:GQ:PL:TP\t0|0:34,0:34:99:0,99,1485:99\t0|1:15,20:35:99:540,0,371:99\t0|1:22,19:41:99:497,0,601:99\nchr1\t967865\t.\tA\tG\t817.16\tPASS\tAC=2;AF=0.333;AN=6;BaseQRankSum=-1.660e-01;ClippingRankSum=0.00;DP=111;ExcessHet=3.9794;FS=1.900;MQ=60.00;MQ0=0;MQRankSum=0.00;POSITIVE_TRAIN_SITE;QD=10.90;ReadPosRankSum=0.998;SOR=0.793;set=Intersection\tGT:AD:DP:GQ:PL:TP\t0|0:36,0:36:99:0,99,1206:99\t0|1:22,15:37:99:370,0,576:99\t0|1:18,20:38:99:479,0,485:99\nchr1\t967941\t.\tG\tA\t982.16\tPASS\tAC=2;AF=0.333;AN=6;BaseQRankSum=4.07;ClippingRankSum=0.00;DP=115;ExcessHet=3.9794;FS=0.000;MQ=60.00;MQ0=0;MQRankSum=0.00;POSITIVE_TRAIN_SITE;QD=12.43;ReadPosRankSum=1.02;SOR=0.661;set=Intersection\tGT:AD:DP:GQ:PL:TP\t0|0:36,0:36:99:0,99,1206:99\t0|1:22,20:42:99:549,0,478:99\t0|1:19,18:37:99:465,0,419:99\nchr1\t969377\t.\tA\tATG\t494.09\tPASS\tAC=1;AF=0.167;AN=6;BaseQRankSum=0.768;ClippingRankSum=0.00;DP=117;ExcessHet=3.0103;FS=0.000;MQ=60.00;MQ0=0;MQRankSum=0.00;QD=11.76;ReadPosRankSum=0.126;SOR=0.709;set=Intersection\tGT:AD:DP:GQ:PL:TP\t0|0:35,0:35:99:0,102,1167:99\t0|1:22,20:42:99:534,0,576:99\t0|0:40,0:40:99:0,103,1125:99\nchr1\t969750\t.\tATG\tA\t418.09\tPASS\tAC=1;AF=0.167;AN=6;BaseQRankSum=-1.040e+00;ClippingRankSum=0.00;DP=122;ExcessHet=3.0103;FS=3.256;MQ=60.00;MQ0=0;MQRankSum=0.00;QD=13.49;ReadPosRankSum=-1.040e-01;SOR=1.426;set=Intersection\tGT:AD:DP:GQ:PL:TP\t0|0:52,0:52:99:0,110,1588:81\t0|1:15,16:31:99:458,0,416:81\t0|0:39,0:39:82:0,82,1189:81\nchr1\t969780\t.\tC\tT\t1010.16\tPASS\tAC=2;AF=0.333;AN=6;BaseQRankSum=3.69;ClippingRankSum=0.00;DP=119;ExcessHet=3.9794;FS=11.247;MQ=60.00;MQ0=0;MQRankSum=0.00;QD=15.08;ReadPosRankSum=0.996;SOR=0.136;set=Intersection\tGT:AD:DP:GQ:PGT:PID:PL:TP\t0|0:52,0:52:99:.:.:0,110,1588:109\t0|1:13,14:27:99:.:.:345,0,278:109\t0|1:14,26:40:99:0|1:969780_C_T:697,0,237:109\nchr1\t971790\t.\tAG\tA\t340.09\tPASS\tAC=1;AF=0.167;AN=6;BaseQRankSum=-2.519e+00;ClippingRankSum=0.00;DP=91;ExcessHet=3.0103;FS=0.000;MQ=60.00;MQ0=0;MQRankSum=0.00;POSITIVE_TRAIN_SITE;QD=9.45;ReadPosRankSum=2.52;SOR=0.703;set=Intersection\tGT:AD:DP:GQ:PL:TP\t0|0:24,0:24:72:0,72,813:71\t0|0:31,0:31:81:0,81,983:71\t0|1:17,19:36:99:380,0,328:71\nchr1\t972790\t.\tC\tG\t1509.16\tPASS\tAC=4;AF=0.667;AN=6;BaseQRankSum=1.62;ClippingRankSum=0.00;DP=75;ExcessHet=3.9794;FS=11.268;MQ=60.00;MQ0=0;MQRankSum=0.00;POSITIVE_TRAIN_SITE;QD=20.12;ReadPosRankSum=-4.230e-01;SOR=2.470;set=Intersection\tGT:AD:DP:GQ:PL:TP\t1|1:0,35:35:99:1170,105,0:104\t1|0:12,7:19:99:166,0,330:104\t1|0:13,8:21:99:205,0,314:104\nchr1\t973034\t.\tC\tT\t2235.16\tPASS\tAC=4;AF=0.667;AN=6;BaseQRankSum=2.50;ClippingRankSum=0.00;DP=113;ExcessHet=3.9794;FS=1.705;MQ=60.00;MQ0=0;MQRankSum=0.00;POSITIVE_TRAIN_SITE;QD=19.78;ReadPosRankSum=1.15;SOR=0.485;set=Intersection\tGT:AD:DP:GQ:PL:TP\t1|1:0,48:48:99:1483,143,0:127\t1|0:13,18:31:99:409,0,225:127\t1|0:19,15:34:99:375,0,422:127\nchr1\t973693\t.\tC\tT\t246.13\tPASS\tAC=1;AF=0.167;AN=6;BaseQRankSum=-1.093e+00;ClippingRankSum=0.00;DP=99;ExcessHet=3.0103;FS=1.484;MQ=60.00;MQ0=0;MQRankSum=0.00;POSITIVE_TRAIN_SITE;QD=8.20;ReadPosRankSum=-5.500e-01;SOR=0.368;set=Intersection\tGT:AD:DP:GQ:PL:TP\t0|0:35,0:35:71:0,71,1147:70\t0|1:18,12:30:99:277,0,495:70\t0|0:34,0:34:99:0,99,1076:70\nchr1\t973858\t.\tG\tC\t4082.13\tPASS\tAC=5;AF=0.833;AN=6;BaseQRankSum=3.39;ClippingRankSum=0.00;DP=111;ExcessHet=3.0103;FS=1.295;MQ=60.00;MQ0=0;MQRankSum=0.00;POSITIVE_TRAIN_SITE;QD=25.49;ReadPosRankSum=-1.446e+00;SOR=0.573;set=Intersection\tGT:AD:DP:GQ:PGT:PID:PL:TP\t1|1:0,46:46:99:1|1:973858_G_C:2061,141,0:116\t1|1:0,39:39:99:.:.:1398,117,0:116\t1|0:9,17:26:99:0|1:973858_G_C:654,0,429:116\nchr1\t973862\t.\tA\tG\t3040.16\tPASS\tAC=4;AF=0.667;AN=6;BaseQRankSum=1.87;ClippingRankSum=0.00;DP=111;ExcessHet=3.9794;FS=2.628;MQ=60.00;MQ0=0;MQRankSum=0.00;POSITIVE_TRAIN_SITE;QD=27.39;ReadPosRankSum=1.10;SOR=0.535;set=Intersection\tGT:AD:DP:GQ:PGT:PID:PL:TP\t1|1:0,45:45:99:1|1:973858_G_C:2057,141,0:127\t1|0:28,14:42:99:.:.:335,0,710:127\t1|0:9,15:24:99:0|1:973858_G_C:680,0,426:127\nchr1\t973946\t.\tC\tT\t2113.16\tPASS\tAC=4;AF=0.667;AN=6;BaseQRankSum=0.472;ClippingRankSum=0.00;DP=108;ExcessHet=3.9794;FS=6.587;MQ=60.00;MQ0=0;MQRankSum=0.00;POSITIVE_TRAIN_SITE;QD=19.57;ReadPosRankSum=-7.180e-01;SOR=0.354;set=Intersection\tGT:AD:DP:GQ:PL:TP\t1|1:0,41:41:99:1308,123,0:123\t1|0:21,15:36:99:380,0,581:123\t1|0:14,17:31:99:457,0,364:123\nchr1\t974039\t.\tC\tT\t258.13\tPASS\tAC=1;AF=0.167;AN=6;BaseQRankSum=3.48;ClippingRankSum=0.00;DP=102;ExcessHet=3.0103;FS=1.451;MQ=60.00;MQ0=0;MQRankSum=0.00;POSITIVE_TRAIN_SITE;QD=8.33;ReadPosRankSum=-6.890e-01;SOR=0.721;set=Intersection\tGT:AD:DP:GQ:PL:TP\t0|0:38,0:38:99:0,101,1140:83\t0|0:33,0:33:84:0,84,952:83\t0|1:20,11:31:99:289,0,472:83\nchr1\t974388\t.\tA\tG\t2448.90\tPASS\tAC=6;AF=1.00;AN=6;DP=77;ExcessHet=3.0103;FS=0.000;MQ=60.00;MQ0=0;POSITIVE_TRAIN_SITE;QD=31.80;SOR=0.828;set=Intersection\tGT:AD:DP:GQ:PL:TP\t1|1:0,19:19:57:624,57,0:59\t1|1:0,38:38:99:1163,114,0:59\t1|1:0,20:20:60:688,60,0:59\nchr1\t975014\t.\tC\tT\t2321.13\tPASS\tAC=5;AF=0.833;AN=6;BaseQRankSum=-9.910e-01;ClippingRankSum=0.00;DP=93;ExcessHet=3.0103;FS=0.000;MQ=60.00;MQ0=0;MQRankSum=0.00;POSITIVE_TRAIN_SITE;QD=24.96;ReadPosRankSum=-8.060e-01;SOR=0.685;set=Intersection\tGT:AD:DP:GQ:PL:TP\t1|1:0,27:27:80:797,80,0:79\t1|0:11,20:31:99:517,0,269:79\t1|1:0,35:35:99:1038,103,0:79\nchr1\t975093\t.\tG\tA\t1865.16\tPASS\tAC=4;AF=0.667;AN=6;BaseQRankSum=0.00;ClippingRankSum=0.00;DP=90;ExcessHet=3.9794;FS=4.724;MQ=60.00;MQ0=0;MQRankSum=0.00;POSITIVE_TRAIN_SITE;QD=20.72;ReadPosRankSum=1.31;SOR=0.304;set=Intersection\tGT:AD:DP:GQ:PL:TP\t1|1:0,28:28:84:878,84,0:84\t1|0:11,19:30:99:505,0,262:84\t1|0:13,19:32:99:514,0,325:84\nchr1\t976215\t.\tA\tG\t789.16\tPASS\tAC=2;AF=0.333;AN=6;BaseQRankSum=1.55;ClippingRankSum=0.00;DP=100;ExcessHet=3.9794;FS=2.113;MQ=60.00;MQ0=0;MQRankSum=0.00;QD=12.33;ReadPosRankSum=-7.620e-01;SOR=1.096;set=Intersection\tGT:AD:DP:GQ:PL:TP\t0|0:36,0:36:99:0,99,1485:99\t0|1:17,18:35:99:473,0,399:99\t0|1:14,15:29:99:348,0,400:99\nchr1\t976536\t.\tC\tT\t2364.16\tPASS\tAC=4;AF=0.667;AN=6;BaseQRankSum=0.706;ClippingRankSum=0.00;DP=108;ExcessHet=3.9794;FS=2.988;MQ=60.00;MQ0=0;MQRankSum=0.00;POSITIVE_TRAIN_SITE;QD=21.89;ReadPosRankSum=-2.150e+00;SOR=0.392;set=Intersection\tGT:AD:DP:GQ:PL:TP\t1|1:0,45:45:99:1443,135,0:127\t1|0:10,19:29:99:554,0,234:127\t1|0:19,15:34:99:399,0,488:127\nchr1\t978230\t.\tG\tA\t1394.16\tPASS\tAC=4;AF=0.667;AN=6;BaseQRankSum=0.979;ClippingRankSum=0.00;DP=75;ExcessHet=3.9794;FS=0.000;MQ=60.00;MQ0=0;MQRankSum=0.00;QD=18.59;ReadPosRankSum=0.730;SOR=0.756;set=Intersection\tGT:AD:DP:GQ:PL:TP\t1|1:1,27:28:48:743,48,0:48\t1|0:8,15:23:99:338,0,120:48\t1|0:10,14:24:99:345,0,187:48\nchr1\t978509\t.\tG\tA\t483.13\tPASS\tAC=1;AF=0.167;AN=6;BaseQRankSum=2.71;ClippingRankSum=0.00;DP=129;ExcessHet=3.0103;FS=2.509;MQ=60.00;MQ0=0;MQRankSum=0.00;POSITIVE_TRAIN_SITE;QD=10.28;ReadPosRankSum=0.255;SOR=0.742;set=Intersection\tGT:AD:DP:GQ:PL:TP\t0|0:41,0:41:74:0,74,1045:70\t0|1:27,20:47:99:514,0,622:70\t0|0:41,0:41:74:0,74,1066:70\nchr1\t978953\t.\tC\tG\t294.13\tPASS\tAC=1;AF=0.167;AN=6;BaseQRankSum=1.80;ClippingRankSum=0.00;DP=103;ExcessHet=3.0103;FS=1.412;MQ=60.00;MQ0=0;MQRankSum=0.00;POSITIVE_TRAIN_SITE;QD=9.49;ReadPosRankSum=-1.223e+00;SOR=0.681;set=Intersection\tGT:AD:DP:GQ:PL:TP\t0|0:32,0:32:96:0,96,1072:49\t0|1:18,13:31:99:325,0,432:49\t0|0:40,0:40:50:0,50,981:49\nchr1\t979182\t.\tG\tC\t2209.16\tPASS\tAC=4;AF=0.667;AN=6;BaseQRankSum=4.64;ClippingRankSum=0.00;DP=109;ExcessHet=3.9794;FS=0.775;MQ=60.00;MQ0=0;MQRankSum=0.00;QD=20.27;ReadPosRankSum=0.899;SOR=0.824;set=Intersection\tGT:AD:DP:GQ:PGT:PID:PL:TP\t1|1:0,34:34:99:.:.:1091,102,0:101\t1|0:18,20:38:99:.:.:571,0,381:101\t1|0:16,21:37:99:1|0:979163_C_T:579,0,380:101\n"
  },
  {
    "path": "tests/AnnotSV/test_24_HtzCompound/input/3samples.theSV.vcf",
    "content": "#CHROM\tPOS\tID\tREF\tALT\tQUAL\tFILTER\tINFO\tFORMAT\tfather\tmother\tprob\nchr1\t934051\tDEL00000005\tG\t<DEL>\t.\tPASS\tIMPRECISE;SVTYPE=DEL;SVMETHOD=EMBL.DELLYv0.8.1;CHR2=chr1;END=934869;PE=10;MAPQ=60;CT=3to5;CIPOS=-72,72;CIEND=-72,72;RDRATIO=0.544828\tGT:GL:GQ:FT:RCL:RC:RCR:CN:DR:DV:RR:RV\t0/0:-51.0882,0,-14.6956:147:PASS:49:15:32:0:5:10:0:0\t0/1:-9.60325,0,-21.6918:96:PASS:53:18:34:0:6:2:0:0\t1/0:0,-2.37679,-28.3685:24:PASS:53:30:26:1:8:0:0:0\n"
  },
  {
    "path": "tests/AnnotSV/test_24_HtzCompound/input/3samples.theSnvindel.vcf",
    "content": "##fileformat=VCFv4.2\n#CHROM\tPOS\tID\tREF\tALT\tQUAL\tFILTER\tINFO\tFORMAT\tprob\tfather\tmother\nchr1\t925036\t.\tG\tA\t509.17\tPASS\tAC=2;AF=0.333;AN=6;BaseQRankSum=1.31;ClippingRankSum=0.00;DP=65;ExcessHet=3.9794;FS=0.000;MQ=60.00;MQ0=0;MQRankSum=0.00;POSITIVE_TRAIN_SITE;QD=11.07;ReadPosRankSum=-3.800e-02;SOR=0.752;set=Intersection\tGT:AD:DP:GQ:PL:TP\t0|0:19,0:19:28:0,28,462:28\t0|1:13,13:26:99:329,0,334:28\t0|1:11,9:20:99:212,0,248:28\nchr1\t925141\t.\tC\tA\t2468.90\tPASS\tAC=6;AF=1.00;AN=6;DP=78;ExcessHet=3.0103;FS=0.000;MQ=60.00;MQ0=0;POSITIVE_TRAIN_SITE;QD=31.65;SOR=2.185;set=Intersection\tGT:AD:DP:GQ:PL:TP\t1|1:0,26:26:78:822,78,0:74\t1|1:0,27:27:81:871,81,0:74\t1|1:0,25:25:75:802,75,0:74\nchr1\t926250\t.\tG\tA\t785.16\tPASS\tAC=2;AF=0.333;AN=6;BaseQRankSum=2.53;ClippingRankSum=0.00;DP=104;ExcessHet=3.9794;FS=0.000;MQ=60.00;MQ0=0;MQRankSum=0.00;POSITIVE_TRAIN_SITE;QD=10.47;ReadPosRankSum=1.05;SOR=0.801;set=Intersection\tGT:AD:DP:GQ:PL:TP\t0|0:29,0:29:81:0,81,937:81\t0|1:18,14:32:99:340,0,409:81\t0|1:25,18:43:99:477,0,617:81\nchr1\t926428\t.\tA\tG\t3587.90\tPASS\tAC=6;AF=1.00;AN=6;DP=127;ExcessHet=3.0103;FS=0.000;MQ=60.00;MQ0=0;POSITIVE_TRAIN_SITE;QD=28.25;SOR=0.808;set=Intersection\tGT:AD:DP:GQ:PL:TP\t1|1:0,37:37:99:1025,111,0:127\t1|1:0,47:47:99:1363,141,0:127\t1|1:0,43:43:99:1226,129,0:127\nchr1\t926713\t.\tT\tC\t4075.90\tPASS\tAC=6;AF=1.00;AN=6;DP=125;ExcessHet=3.0103;FS=0.000;MQ=60.00;MQ0=0;POSITIVE_TRAIN_SITE;QD=32.61;SOR=0.958;set=Intersection\tGT:AD:DP:GQ:PL:TP\t1|1:0,42:42:99:1374,126,0:101\t1|1:0,34:34:99:1128,102,0:101\t1|1:0,49:49:99:1600,147,0:101\nchr1\t926744\t.\tA\tG\t3916.90\tPASS\tAC=6;AF=1.00;AN=6;DP=129;ExcessHet=3.0103;FS=0.000;MQ=60.00;MQ0=0;POSITIVE_TRAIN_SITE;QD=30.36;SOR=1.335;set=Intersection\tGT:AD:DP:GQ:PL:TP\t1|1:0,41:41:99:1189,123,0:99\t1|1:0,33:33:99:1027,99,0:99\t1|1:0,55:55:99:1727,165,0:99\nchr1\t927003\t.\tC\tT\t5305.90\tPASS\tAC=6;AF=1.00;AN=6;DP=120;ExcessHet=3.0103;FS=0.000;MQ=60.00;MQ0=0;POSITIVE_TRAIN_SITE;QD=32.47;SOR=0.796;set=Intersection\tGT:AD:DP:GQ:PGT:PID:PL:TP\t1|1:0,47:47:99:1|1:927003_C_T:2055,141,0:89\t1|1:0,30:30:90:1|1:927003_C_T:1339,90,0:89\t1|1:0,43:43:99:1|1:927003_C_T:1938,132,0:89\nchr1\t927486\t.\tC\tT\t1097.16\tPASS\tAC=2;AF=0.333;AN=6;BaseQRankSum=3.54;ClippingRankSum=0.00;DP=125;ExcessHet=3.9794;FS=0.836;MQ=60.00;MQ0=0;MQRankSum=0.00;POSITIVE_TRAIN_SITE;QD=13.38;ReadPosRankSum=0.816;SOR=0.523;set=Intersection\tGT:AD:DP:GQ:PL:TP\t0|0:43,0:43:99:0,118,1330:118\t0|1:20,23:43:99:621,0,381:118\t0|1:21,18:39:99:508,0,500:118\nchr1\t927744\t.\tG\tT\t3950.90\tPASS\tAC=6;AF=1.00;AN=6;DP=123;ExcessHet=3.0103;FS=0.000;MQ=60.00;MQ0=0;POSITIVE_TRAIN_SITE;QD=32.12;SOR=0.885;set=Intersection\tGT:AD:DP:GQ:PGT:PID:PL:TP\t1|1:0,46:46:99:.:.:1480,138,0:109\t1|1:0,40:40:99:.:.:1304,120,0:109\t1|1:0,37:37:99:1|1:927744_G_T:1193,110,0:109\nchr1\t928622\t.\tG\tC\t2008.16\tPASS\tAC=4;AF=0.667;AN=6;BaseQRankSum=-2.044e+00;ClippingRankSum=0.00;DP=123;ExcessHet=3.9794;FS=0.000;MQ=60.00;MQ0=0;MQRankSum=0.00;POSITIVE_TRAIN_SITE;QD=16.33;ReadPosRankSum=0.494;SOR=0.696;set=Intersection\tGT:AD:DP:GQ:PL:TP\t1|1:2,30:32:47:777,47,0:47\t1|0:17,23:40:99:549,0,420:47\t1|0:22,29:51:99:714,0,567:47\nchr1\t929346\t.\tT\tA\t3757.90\tPASS\tAC=6;AF=1.00;AN=6;BaseQRankSum=-3.210e-01;ClippingRankSum=0.00;DP=116;ExcessHet=3.0103;FS=3.402;MQ=60.00;MQ0=0;MQRankSum=0.00;POSITIVE_TRAIN_SITE;QD=32.40;ReadPosRankSum=-5.060e-01;SOR=0.535;set=Intersection\tGT:AD:DP:GQ:PL:TP\t1|1:0,41:41:99:1355,123,0:72\t1|1:1,35:36:73:1117,73,0:72\t1|1:0,39:39:99:1312,117,0:72\nchr1\t929375\t.\tA\tG\t4310.90\tPASS\tAC=6;AF=1.00;AN=6;BaseQRankSum=-1.113e+00;ClippingRankSum=0.00;DP=100;ExcessHet=3.0103;FS=3.872;MQ=60.00;MQ0=0;MQRankSum=0.00;POSITIVE_TRAIN_SITE;QD=27.52;ReadPosRankSum=-7.180e-01;SOR=0.872;set=Intersection\tGT:AD:DP:GQ:PGT:PID:PL:TP\t1|1:0,33:33:99:1|1:929375_A_G:1459,99,0:45\t1|1:1,33:34:45:1|1:929375_A_G:1386,45,0:45\t1|1:0,33:33:99:1|1:929375_A_G:1492,102,0:45\nchr1\t929377\t.\tG\tA\t4310.90\tPASS\tAC=6;AF=1.00;AN=6;BaseQRankSum=-1.270e-01;ClippingRankSum=0.00;DP=100;ExcessHet=3.0103;FS=3.872;MQ=60.00;MQ0=0;MQRankSum=0.00;POSITIVE_TRAIN_SITE;QD=27.10;ReadPosRankSum=-7.150e-01;SOR=0.872;set=Intersection\tGT:AD:DP:GQ:PGT:PID:PL:TP\t1|1:0,33:33:99:1|1:929375_A_G:1459,99,0:45\t1|1:1,32:33:45:1|1:929375_A_G:1386,45,0:45\t1|1:0,34:34:99:1|1:929375_A_G:1492,102,0:45\nchr1\t929558\t.\tG\tA\t1031.16\tPASS\tAC=2;AF=0.333;AN=6;BaseQRankSum=2.49;ClippingRankSum=0.00;DP=105;ExcessHet=3.9794;FS=4.432;MQ=60.00;MQ0=0;MQRankSum=0.00;POSITIVE_TRAIN_SITE;QD=13.39;ReadPosRankSum=0.699;SOR=1.218;set=Intersection\tGT:AD:DP:GQ:PL:TP\t0|0:28,0:28:81:0,81,1215:81\t0|1:14,14:28:99:386,0,331:81\t0|1:23,26:49:99:677,0,481:81\nchr1\t929839\t.\tG\tA\t1482.16\tPASS\tAC=4;AF=0.667;AN=6;BaseQRankSum=1.32;ClippingRankSum=0.00;DP=80;ExcessHet=3.9794;FS=0.898;MQ=60.00;MQ0=0;MQRankSum=0.00;POSITIVE_TRAIN_SITE;QD=18.53;ReadPosRankSum=-9.860e-01;SOR=0.527;set=Intersection\tGT:AD:DP:GQ:PGT:PID:PL:TP\t1|1:0,26:26:77:1|1:929839_G_A:873,77,0:77\t1|0:13,8:21:99:.:.:190,0,370:77\t1|0:15,18:33:99:.:.:451,0,362:77\nchr1\t930939\t.\tG\tA\t3741.90\tPASS\tAC=6;AF=1.00;AN=6;DP=118;ExcessHet=3.0103;FS=0.000;MQ=60.00;MQ0=0;POSITIVE_TRAIN_SITE;QD=31.71;SOR=0.798;set=Intersection\tGT:AD:DP:GQ:PL:TP\t1|1:0,43:43:99:1382,129,0:95\t1|1:0,43:43:99:1345,129,0:95\t1|1:0,32:32:96:1041,96,0:95\nchr1\t931131\t.\tC\tCCCCT\t499.12\tPASS\tAC=2;AF=0.333;AN=6;BaseQRankSum=0.054;ClippingRankSum=0.00;DP=59;ExcessHet=3.9794;FS=0.000;MQ=60.00;MQ0=0;MQRankSum=0.00;QD=16.64;ReadPosRankSum=-1.030e-01;SOR=0.576;set=Intersection\tGT:AD:DP:GQ:PL:TP\t0|0:29,0:29:51:0,51,765:51\t0|1:7,7:14:99:273,0,297:51\t0|1:9,7:16:99:267,0,373:51\nchr1\t931513\t.\tT\tC\t1145.16\tPASS\tAC=2;AF=0.333;AN=6;BaseQRankSum=2.64;ClippingRankSum=0.00;DP=112;ExcessHet=3.9794;FS=0.883;MQ=60.00;MQ0=0;MQRankSum=0.00;POSITIVE_TRAIN_SITE;QD=15.48;ReadPosRankSum=-5.200e-02;SOR=0.565;set=Intersection\tGT:AD:DP:GQ:PL:TP\t0|0:38,0:38:99:0,100,1175:99\t0|1:15,17:32:99:476,0,354:99\t0|1:16,26:42:99:701,0,430:99\nchr1\t932204\t.\tA\tT\t1074.16\tPASS\tAC=2;AF=0.333;AN=6;BaseQRankSum=1.76;ClippingRankSum=0.00;DP=126;ExcessHet=3.9794;FS=0.815;MQ=60.00;MQ0=0;MQRankSum=0.00;POSITIVE_TRAIN_SITE;QD=12.21;ReadPosRankSum=-2.040e-01;SOR=0.556;set=Intersection\tGT:AD:DP:GQ:PL:TP\t0|0:38,0:38:99:0,102,1206:101\t0|1:17,22:39:99:637,0,433:101\t0|1:29,20:49:99:469,0,724:101\nchr1\t932613\t.\tGTTTC\tG\t1335.12\tPASS\tAC=2;AF=0.333;AN=6;BaseQRankSum=1.06;ClippingRankSum=0.00;DP=110;ExcessHet=3.9794;FS=4.398;MQ=60.00;MQ0=0;MQRankSum=0.00;QD=18.04;ReadPosRankSum=0.190;SOR=0.997;set=Intersection\tGT:AD:DP:GQ:PL:TP\t0|0:36,0:36:99:0,99,1145:99\t0|1:17,19:36:99:747,0,721:99\t0|1:21,17:38:99:629,0,1001:99\nchr1\t932949\t.\tA\tC\t3814.90\tPASS\tAC=6;AF=1.00;AN=6;DP=120;ExcessHet=3.0103;FS=0.000;MQ=60.00;MQ0=0;POSITIVE_TRAIN_SITE;QD=31.79;SOR=0.871;set=Intersection\tGT:AD:DP:GQ:PL:TP\t1|1:0,48:48:99:1467,143,0:77\t1|1:0,26:26:78:882,78,0:77\t1|1:0,46:46:99:1492,137,0:77\nchr1\t932976\t.\tC\tT\t2246.16\tPASS\tAC=4;AF=0.667;AN=6;BaseQRankSum=2.74;ClippingRankSum=0.00;DP=118;ExcessHet=3.9794;FS=1.547;MQ=60.00;MQ0=0;MQRankSum=0.00;POSITIVE_TRAIN_SITE;QD=19.04;ReadPosRankSum=0.626;SOR=0.920;set=Intersection\tGT:AD:DP:GQ:PL:TP\t1|1:0,47:47:99:1503,141,0:127\t1|0:18,7:25:99:168,0,440:127\t1|0:24,22:46:99:607,0,600:127\nchr1\t933024\t.\tC\tT\t766.16\tPASS\tAC=2;AF=0.333;AN=6;BaseQRankSum=-1.026e+00;ClippingRankSum=0.00;DP=105;ExcessHet=3.9794;FS=2.124;MQ=60.00;MQ0=0;MQRankSum=0.00;POSITIVE_TRAIN_SITE;QD=12.56;ReadPosRankSum=0.784;SOR=1.034;set=Intersection\tGT:AD:DP:GQ:PL:TP\t0|0:42,0:42:99:0,108,1620:108\t0|1:8,12:22:99:356,0,217:108\t0|1:23,18:41:99:442,0,633:108\nchr1\t933411\t.\tC\tT\t999.16\tPASS\tAC=2;AF=0.333;AN=6;BaseQRankSum=0.415;ClippingRankSum=0.00;DP=108;ExcessHet=3.9794;FS=0.000;MQ=60.00;MQ0=0;MQRankSum=0.00;POSITIVE_TRAIN_SITE;QD=14.07;ReadPosRankSum=0.599;SOR=0.607;set=Intersection\tGT:AD:DP:GQ:PL:TP\t0|0:37,0:37:99:0,100,1152:99\t0|1:11,17:28:99:467,0,253:99\t0|1:21,22:43:99:564,0,524:99\nchr1\t933511\t.\tA\tG\t4079.90\tPASS\tAC=6;AF=1.00;AN=6;DP=127;ExcessHet=3.0103;FS=0.000;MQ=60.00;MQ0=0;POSITIVE_TRAIN_SITE;QD=32.13;SOR=0.774;set=Intersection\tGT:AD:DP:GQ:PL:TP\t1|1:0,51:51:99:1623,153,0:107\t1|1:0,40:40:99:1344,120,0:107\t1|1:0,36:36:99:1139,108,0:107\nchr1\t933548\t.\tA\tAG\t615.12\tPASS\tAC=2;AF=0.333;AN=6;BaseQRankSum=-1.074e+00;ClippingRankSum=0.00;DP=118;ExcessHet=3.9794;FS=15.502;MQ=60.00;MQ0=0;MQRankSum=0.00;POSITIVE_TRAIN_SITE;QD=7.69;ReadPosRankSum=0.165;SOR=0.983;set=Intersection\tGT:AD:DP:GQ:PL:TP\t0|0:38,0:38:99:0,99,1200:99\t0|1:22,24:46:99:385,0,347:99\t0|1:17,17:34:99:271,0,273:99\nchr1\t934601\t.\tC\tT\t942.16\tPASS\tAC=2;AF=0.333;AN=6;BaseQRankSum=1.43;ClippingRankSum=0.00;DP=109;ExcessHet=3.9794;FS=12.166;MQ=60.00;MQ0=0;MQRankSum=0.00;POSITIVE_TRAIN_SITE;QD=12.24;ReadPosRankSum=-5.380e-01;SOR=2.012;set=Intersection\tGT:AD:DP:GQ:PL:TP\t0|0:32,0:32:93:0,93,1395:93\t0|1:22,21:43:99:540,0,607:93\t0|1:18,16:34:99:434,0,463:93\nchr1\t934758\t.\tT\tTG\t265.12\tPASS\tAC=2;AF=0.333;AN=6;BaseQRankSum=-3.150e-01;ClippingRankSum=0.00;DP=114;ExcessHet=3.9794;FS=2.141;MQ=60.00;MQ0=0;MQRankSum=0.00;QD=3.68;ReadPosRankSum=2.34;SOR=1.066;set=Intersection\tGT:AD:DP:GQ:PL:TP\t1|0:42,0:42:77:0,77,1181:76\t0|1:23,14:37:99:181,0,371:76\t0|1:24,11:35:99:125,0,395:76\nchr1\t935523\t.\tT\tC\t1002.16\tPASS\tAC=2;AF=0.333;AN=6;BaseQRankSum=0.520;ClippingRankSum=0.00;DP=109;ExcessHet=3.9794;FS=3.200;MQ=60.00;MQ0=0;MQRankSum=0.00;POSITIVE_TRAIN_SITE;QD=13.92;ReadPosRankSum=0.446;SOR=0.967;set=Intersection\tGT:AD:DP:GQ:PL:TP\t0|0:37,0:37:99:0,105,1086:104\t0|1:18,24:42:99:648,0,499:104\t0|1:16,14:30:99:386,0,446:104\nchr1\t935954\t.\tG\tT\t807.16\tPASS\tAC=2;AF=0.333;AN=6;BaseQRankSum=1.63;ClippingRankSum=0.00;DP=108;ExcessHet=3.9794;FS=6.287;MQ=60.00;MQ0=0;MQRankSum=0.00;POSITIVE_TRAIN_SITE;QD=11.21;ReadPosRankSum=-1.399e+00;SOR=0.497;set=Intersection\tGT:AD:DP:GQ:PL:TP\t0|0:36,0:36:99:0,99,1300:99\t0|1:21,17:38:99:445,0,565:99\t0|1:19,15:34:99:394,0,498:99\nchr1\t938178\t.\tG\tT\t1052.16\tPASS\tAC=2;AF=0.333;AN=6;BaseQRankSum=0.615;ClippingRankSum=0.00;DP=107;ExcessHet=3.9794;FS=0.877;MQ=60.00;MQ0=0;MQRankSum=0.00;POSITIVE_TRAIN_SITE;QD=14.41;ReadPosRankSum=1.81;SOR=0.816;set=Intersection\tGT:AD:DP:GQ:PL:TP\t0|0:34,0:34:99:0,99,1001:99\t0|1:11,13:24:99:344,0,270:99\t0|1:22,27:49:99:740,0,561:99\nchr1\t939779\t.\tAGCCAGTGGACGCCGACCT\tA\t1734.12\tPASS\tAC=2;AF=0.333;AN=6;BaseQRankSum=0.801;ClippingRankSum=0.00;DP=119;ExcessHet=3.9794;FS=0.000;MQ=60.00;MQ0=0;MQRankSum=0.00;QD=20.89;ReadPosRankSum=2.93;SOR=0.721;set=Intersection\tGT:AD:DP:GQ:PL:TP\t0|0:36,0:36:90:0,90,1112:90\t0|1:27,20:47:99:758,0,3830:90\t0|1:11,25:36:99:1017,0,1516:90\nchr1\t940262\t.\tC\tCG\t80.12\tPASS\tAC=1;AF=0.167;AN=6;BaseQRankSum=-1.645e+00;ClippingRankSum=0.00;DP=34;ExcessHet=3.0103;FS=0.000;MQ=60.00;MQ0=0;MQRankSum=0.00;QD=16.02;ReadPosRankSum=0.253;SOR=1.022;set=Intersection\tGT:AD:DP:GQ:PGT:PID:PL:TP\t0|0:19,0:19:22:.:.:0,22,440:21\t0|0:10,0:10:30:.:.:0,30,297:21\t0|1:2,3:5:75:0|1:940256_C_T:120,0,75:21\nchr1\t940263\t.\tC\tG,CG\t186.16\tPASS\tAC=1,1;AF=0.167,0.167;AN=6;BaseQRankSum=1.07;ClippingRankSum=0.00;DP=31;ExcessHet=3.9794;FS=0.000;MQ=60.00;MQ0=0;MQRankSum=0.00;QD=15.51;ReadPosRankSum=0.484;SOR=0.293;set=Intersection\tGT:AD:DP:GQ:PGT:PID:PL\t0/0:19,0,0:19:51:.:.:0,51,765,51,765,765\t0/1:3,4,0:7:53:.:.:98,0,53,107,65,172\t0/2:2,0,3:5:75:0|1:940256_C_T:120,126,210,0,84,75\nchr1\t940296\t.\tGCC\tG\t65.91\tPASS\tAC=1;AF=0.250;AN=4;BaseQRankSum=-5.240e-01;ClippingRankSum=0.00;DP=30;ExcessHet=3.0103;FS=0.000;MQ=47.86;MQ0=0;MQRankSum=0.00;QD=13.18;ReadPosRankSum=-5.240e-01;SOR=0.693;set=Intersection\tGT:AD:DP:GQ:PL:TP\t0|0:21,0:21:28:0,28,500:26\t0|1:1,4:5:15:104,0,15:26\t./.:4,0:4:.:0,0,0\nchr1\t940390\t.\tA\tG\t470.16\tPASS\tAC=2;AF=0.333;AN=6;BaseQRankSum=1.48;ClippingRankSum=0.00;DP=62;ExcessHet=3.9794;FS=4.039;MQ=60.00;MQ0=0;MQRankSum=0.00;QD=12.37;ReadPosRankSum=0.047;SOR=0.202;set=Intersection\tGT:AD:DP:GQ:PL:TP\t0|0:24,0:24:47:0,47,734:47\t0|1:14,6:20:99:149,0,372:47\t0|1:6,12:18:99:353,0,154:47\nchr1\t940820\t.\tG\tC\t159.13\tPASS\tAC=1;AF=0.167;AN=6;BaseQRankSum=3.26;ClippingRankSum=0.00;DP=102;ExcessHet=3.0103;FS=0.000;MQ=60.00;MQ0=0;MQRankSum=0.00;POSITIVE_TRAIN_SITE;QD=3.88;ReadPosRankSum=-1.373e+00;SOR=0.892;set=Intersection\tGT:AD:DP:GQ:PL:TP\t0|0:27,0:27:75:0,75,1125:74\t0|0:34,0:34:99:0,99,1081:74\t0|1:32,9:41:99:190,0,774:74\nchr1\t941119\t.\tA\tG\t533.16\tPASS\tAC=2;AF=0.333;AN=6;BaseQRankSum=0.057;ClippingRankSum=0.00;DP=87;ExcessHet=3.9794;FS=5.572;MQ=60.00;MQ0=0;MQRankSum=0.00;POSITIVE_TRAIN_SITE;QD=9.52;ReadPosRankSum=1.19;SOR=1.034;set=Intersection\tGT:AD:DP:GQ:PL:TP\t0|0:31,0:31:79:0,79,989:79\t0|1:17,13:30:99:316,0,460:79\t0|1:16,10:26:99:249,0,455:79\nchr1\t942335\t.\tC\tG\t869.16\tPASS\tAC=2;AF=0.333;AN=6;BaseQRankSum=0.406;ClippingRankSum=0.00;DP=86;ExcessHet=3.9794;FS=3.665;MQ=60.00;MQ0=0;MQRankSum=0.00;POSITIVE_TRAIN_SITE;QD=14.25;ReadPosRankSum=2.31;SOR=1.270;set=Intersection\tGT:AD:DP:GQ:PL:TP\t0|0:25,0:25:72:0,72,778:72\t0|1:11,16:27:99:384,0,231:72\t0|1:13,21:34:99:517,0,286:72\nchr1\t943526\t.\tCTTT\tC\t897.12\tPASS\tAC=2;AF=0.333;AN=6;BaseQRankSum=0.996;ClippingRankSum=0.00;DP=51;ExcessHet=3.9794;FS=1.505;MQ=68.61;MQ0=0;MQRankSum=0.00;QD=36.27;ReadPosRankSum=-3.860e-01;SOR=0.396;set=Intersection\tGT:AD:DP:GQ:PL:TP\t0|0:6,0:16:3:0,3,107:4\t0|1:1,11:18:35:377,0,35:4\t0|1:1,11:17:20:376,0,20:4\nchr1\t944296\t.\tG\tA\t1602.16\tPASS\tAC=2;AF=0.333;AN=6;BaseQRankSum=0.809;ClippingRankSum=0.00;DP=115;ExcessHet=3.9794;FS=0.864;MQ=60.00;MQ0=0;MQRankSum=0.00;POSITIVE_TRAIN_SITE;QD=19.54;ReadPosRankSum=0.593;SOR=0.858;set=Intersection\tGT:AD:DP:GQ:PGT:PID:PL:TP\t0|0:33,0:33:90:.:.:0,90,1350:90\t0|1:25,29:54:99:0|1:944296_G_A:1108,0,1292:90\t0|1:9,19:28:99:.:.:526,0,178:90\nchr1\t944307\t.\tT\tC\t1562.16\tPASS\tAC=2;AF=0.333;AN=6;BaseQRankSum=2.73;ClippingRankSum=0.00;DP=114;ExcessHet=3.9794;FS=4.260;MQ=60.00;MQ0=0;MQRankSum=0.00;POSITIVE_TRAIN_SITE;QD=19.05;ReadPosRankSum=0.919;SOR=1.179;set=Intersection\tGT:AD:DP:GQ:PGT:PID:PL:TP\t0|0:32,0:32:93:.:.:0,93,1395:93\t0|1:26,30:56:99:0|1:944296_G_A:1118,0,1320:93\t0|1:10,16:26:99:.:.:476,0,206:93\n"
  },
  {
    "path": "tests/AnnotSV/test_24_HtzCompound/input/configfile",
    "content": "# This file is used to simplify the configuration of AnnotSV.\n# Anything behind a hashtag is considered as a comment\n# Please, feel free to change the AnnotSV options.\n\n#------------------\n# AnnotSV Options :\n#------------------\n\n-candidateGenesFiltering:   0\n\n-genomeBuild:               GRCh37\n\n-hpo:                       \"\"\n\n-includeCI:                 1\n\n-metrics:                   \"us\"\n\n-minTotalNumber:            \"500\"\n\n-overlap:                   100\n\n-overwrite:                 1\n\n-promoterSize:              500\n\n-rankFiltering:             \"1-5,NA\"\n\n-reciprocal:                0\n\n-snvindelPASS:              0\n\n-SVinputInfo:               1\n\n-SVminSize:                 50\n\n-annotationMode:            \"both\"\n\n\n#------------------------\n# AnnotSV Output columns:\n#------------------------\n# Output column names are listed below.\n# In order to disable default annotations provided by AnnotSV, some column names (the ones that are not marked with an *) can be commented with a hash character (\"#\") by the user.\n\nAnnotSV_ID                      *\nSV_chrom                        *\nSV_start                        *\nSV_end                          *\nSV_length                       *\nSV_type                         *\n#Samples_ID\nAnnotation_mode                 *\n\n# Genes annotations:\nGene_name                       *\nGene_count                      *\nTx                              *\nTx_start                        *\nTx_end                          *\nExon_count\nOverlapped_tx_length            *\nOverlapped_CDS_length           *\nFrameshift                      *\nLocation                        *\nLocation2                       *\nDist_nearest_SS                 *\nNearest_SS_type                 *\nIntersect_start                 *\nIntersect_end                   *\n\n# Regulatory Elements annotations:\nRE_gene                         *\n\n# Annotations with benign genes or genomic regions:\nB_gain_source                   *\nB_gain_coord                    *\nB_loss_source                   *\nB_loss_coord                    *\nB_ins_source                    \nB_ins_coord                     \nB_inv_source                    \nB_inv_coord\n\n# Annotations with pathogenic genes or genomic regions:\nP_gain_phen \nP_gain_hpo \nP_gain_source \nP_gain_coord \nP_loss_phen \nP_loss_hpo \nP_loss_source \nP_loss_coord\nP_ins_phen\nP_ins_hpo\nP_ins_source\nP_ins_coord\nP_inv_phen\nP_inv_hpo\nP_inv_source\nP_inv_coord\n\n# Annotations with pathogenic snv/indel:\nP_snvindel_nb\nP_snvindel_phen\n\n# Cancer\nCosmic_ID\nCosmic_mut_typ\n\n# Breakpoints annotations\nTAD_coordinate\nENCODE_experiment\nGC_content_left\nGC_content_right\nRepeat_coord_left\nRepeat_type_left\nRepeat_coord_right\nRepeat_type_right\nGap_left\nGap_right\nSegDup_left\nSegDup_right\nENCODE_blacklist_left\nENCODE_blacklist_characteristics_left\nENCODE_blacklist_right\nENCODE_blacklist_characteristics_right\n\n# Gene-based annotations:\nACMG\nHI                              *\nTS                              *\nDDD_status\nDDD_mode\nDDD_consequence\nDDD_disease\nDDD_pmid\nDDD_HI_percent\nExAC_synZ\nExAC_misZ\nExAC_delZ\nExAC_dupZ\nExAC_cnvZ\nLOEUF_bin\nExAC_pLI                        \nGnomAD_pLI                      *\nOMIM_morbid                     *\nOMIM_morbid_candidate           *\nOMIM_ID\nOMIM_phenotype\nOMIM_inheritance\nExomiser_gene_pheno_score\nHuman_pheno_evidence\nMouse_pheno_evidence\nFish_pheno_evidence\n\n# Ranking:\nAnnotSV_ranking_score\nAnnotSV_ranking_criteria\nACMG_class\n\n\n"
  },
  {
    "path": "tests/AnnotSV/test_24_HtzCompound/input/test1.SV.bed",
    "content": "2\t27313898\t27314025\tDEL\n"
  },
  {
    "path": "tests/AnnotSV/test_24_HtzCompound/input/test1.SV.vcf",
    "content": "##fileformat=VCFv4.2\r\n##source=LUMPY\r\n##INFO=<ID=SVTYPE,Number=1,Type=String,Description=\"Type of structural variant\">\r\n##INFO=<ID=SVLEN,Number=.,Type=Integer,Description=\"Difference in length between REF and ALT alleles\">\r\n##INFO=<ID=END,Number=1,Type=Integer,Description=\"End position of the variant described in this record\">\r\n##INFO=<ID=STRANDS,Number=.,Type=String,Description=\"Strand orientation of the adjacency in BEDPE format (DEL:+-, DUP:-+, INV:++/--)\">\r\n##INFO=<ID=IMPRECISE,Number=0,Type=Flag,Description=\"Imprecise structural variation\">\r\n##INFO=<ID=CIPOS,Number=2,Type=Integer,Description=\"Confidence interval around POS for imprecise variants\">\r\n##INFO=<ID=CIEND,Number=2,Type=Integer,Description=\"Confidence interval around END for imprecise variants\">\r\n##INFO=<ID=CIPOS95,Number=2,Type=Integer,Description=\"Confidence interval (95%) around POS for imprecise variants\">\r\n##INFO=<ID=CIEND95,Number=2,Type=Integer,Description=\"Confidence interval (95%) around END for imprecise variants\">\r\n##INFO=<ID=MATEID,Number=.,Type=String,Description=\"ID of mate breakends\">\r\n##INFO=<ID=EVENT,Number=1,Type=String,Description=\"ID of event associated to breakend\">\r\n##INFO=<ID=SECONDARY,Number=0,Type=Flag,Description=\"Secondary breakend in a multi-line variants\">\r\n##INFO=<ID=SU,Number=.,Type=Integer,Description=\"Number of pieces of evidence supporting the variant across all samples\">\r\n##INFO=<ID=PE,Number=.,Type=Integer,Description=\"Number of paired-end reads supporting the variant across all samples\">\r\n##INFO=<ID=SR,Number=.,Type=Integer,Description=\"Number of split reads supporting the variant across all samples\">\r\n##INFO=<ID=BD,Number=.,Type=Integer,Description=\"Amount of BED evidence supporting the variant across all samples\">\r\n##INFO=<ID=EV,Number=.,Type=String,Description=\"Type of LUMPY evidence contributing to the variant call\">\r\n##INFO=<ID=PRPOS,Number=.,Type=String,Description=\"LUMPY probability curve of the POS breakend\">\r\n##INFO=<ID=PREND,Number=.,Type=String,Description=\"LUMPY probability curve of the END breakend\">\r\n##ALT=<ID=DEL,Description=\"Deletion\">\r\n##ALT=<ID=DUP,Description=\"Duplication\">\r\n##ALT=<ID=INV,Description=\"Inversion\">\r\n##ALT=<ID=DUP:TANDEM,Description=\"Tandem duplication\">\r\n##ALT=<ID=INS,Description=\"Insertion of novel sequence\">\r\n##ALT=<ID=CNV,Description=\"Copy number variable region\">\r\n##FORMAT=<ID=GT,Number=1,Type=String,Description=\"Genotype\">\r\n##FORMAT=<ID=SU,Number=1,Type=Integer,Description=\"Number of pieces of evidence supporting the variant\">\r\n##FORMAT=<ID=PE,Number=1,Type=Integer,Description=\"Number of paired-end reads supporting the variant\">\r\n##FORMAT=<ID=SR,Number=1,Type=Integer,Description=\"Number of split reads supporting the variant\">\r\n##FORMAT=<ID=BD,Number=1,Type=Integer,Description=\"Amount of BED evidence supporting the variant\">\r\n#CHROM\tPOS\tID\tREF\tALT\tQUAL\tFILTER\tINFO\tFORMAT\tsample-001\tsample-002\r\n2\t27313898\t606\tN\t<DEL>\t59.61\t.\tSVTYPE=DEL;SVLEN=-127;END=27314025;STRANDS=+-:6;CIPOS=-6,5;CIEND=-6,5;CIPOS95=0,0;CIEND95=0,0;SU=6;PE=0;SR=6\tGT:SU:PE:SR:GQ:SQ:GL:DP:RO:AO:QR:QA:RS:AS:ASC:RP:AP:AB\t0/0:2:0:2:117:0.00:-4,-16,-61:70:66:3:66:3:66:1:1:0:0:0.043\t0/1:4:0:4:59:59.61:-15,-9,-43:61:52:8:52:8:52:6:2:0:0:0.13\r\n"
  },
  {
    "path": "tests/AnnotSV/test_24_HtzCompound/input/test1.SV.withoutGT.vcf",
    "content": "##fileformat=VCFv4.2\r\n##source=LUMPY\r\n##INFO=<ID=SVTYPE,Number=1,Type=String,Description=\"Type of structural variant\">\r\n##INFO=<ID=SVLEN,Number=.,Type=Integer,Description=\"Difference in length between REF and ALT alleles\">\r\n##INFO=<ID=END,Number=1,Type=Integer,Description=\"End position of the variant described in this record\">\r\n##INFO=<ID=STRANDS,Number=.,Type=String,Description=\"Strand orientation of the adjacency in BEDPE format (DEL:+-, DUP:-+, INV:++/--)\">\r\n##INFO=<ID=IMPRECISE,Number=0,Type=Flag,Description=\"Imprecise structural variation\">\r\n##INFO=<ID=CIPOS,Number=2,Type=Integer,Description=\"Confidence interval around POS for imprecise variants\">\r\n##INFO=<ID=CIEND,Number=2,Type=Integer,Description=\"Confidence interval around END for imprecise variants\">\r\n##INFO=<ID=CIPOS95,Number=2,Type=Integer,Description=\"Confidence interval (95%) around POS for imprecise variants\">\r\n##INFO=<ID=CIEND95,Number=2,Type=Integer,Description=\"Confidence interval (95%) around END for imprecise variants\">\r\n##INFO=<ID=MATEID,Number=.,Type=String,Description=\"ID of mate breakends\">\r\n##INFO=<ID=EVENT,Number=1,Type=String,Description=\"ID of event associated to breakend\">\r\n##INFO=<ID=SECONDARY,Number=0,Type=Flag,Description=\"Secondary breakend in a multi-line variants\">\r\n##INFO=<ID=SU,Number=.,Type=Integer,Description=\"Number of pieces of evidence supporting the variant across all samples\">\r\n##INFO=<ID=PE,Number=.,Type=Integer,Description=\"Number of paired-end reads supporting the variant across all samples\">\r\n##INFO=<ID=SR,Number=.,Type=Integer,Description=\"Number of split reads supporting the variant across all samples\">\r\n##INFO=<ID=BD,Number=.,Type=Integer,Description=\"Amount of BED evidence supporting the variant across all samples\">\r\n##INFO=<ID=EV,Number=.,Type=String,Description=\"Type of LUMPY evidence contributing to the variant call\">\r\n##INFO=<ID=PRPOS,Number=.,Type=String,Description=\"LUMPY probability curve of the POS breakend\">\r\n##INFO=<ID=PREND,Number=.,Type=String,Description=\"LUMPY probability curve of the END breakend\">\r\n##ALT=<ID=DEL,Description=\"Deletion\">\r\n##ALT=<ID=DUP,Description=\"Duplication\">\r\n##ALT=<ID=INV,Description=\"Inversion\">\r\n##ALT=<ID=DUP:TANDEM,Description=\"Tandem duplication\">\r\n##ALT=<ID=INS,Description=\"Insertion of novel sequence\">\r\n##ALT=<ID=CNV,Description=\"Copy number variable region\">\r\n##FORMAT=<ID=GT,Number=1,Type=String,Description=\"Genotype\">\r\n##FORMAT=<ID=SU,Number=1,Type=Integer,Description=\"Number of pieces of evidence supporting the variant\">\r\n##FORMAT=<ID=PE,Number=1,Type=Integer,Description=\"Number of paired-end reads supporting the variant\">\r\n##FORMAT=<ID=SR,Number=1,Type=Integer,Description=\"Number of split reads supporting the variant\">\r\n##FORMAT=<ID=BD,Number=1,Type=Integer,Description=\"Amount of BED evidence supporting the variant\">\r\n#CHROM\tPOS\tID\tREF\tALT\tQUAL\tFILTER\tINFO\tFORMAT\tsample-001\tsample-002\r\n2\t27313898\t606\tN\t<DEL>\t59.61\t.\tSVTYPE=DEL;SVLEN=-127;END=27314025;STRANDS=+-:6;CIPOS=-6,5;CIEND=-6,5;CIPOS95=0,0;CIEND95=0,0;SU=6;PE=0;SR=6\tTT:SU:PE:SR:GQ:SQ:GL:DP:RO:AO:QR:QA:RS:AS:ASC:RP:AP:AB\t0/0:2:0:2:117:0.00:-4,-16,-61:70:66:3:66:3:66:1:1:0:0:0.043\t0/1:4:0:4:59:59.61:-15,-9,-43:61:52:8:52:8:52:6:2:0:0:0.13\r\n"
  },
  {
    "path": "tests/AnnotSV/test_24_HtzCompound/input/test1.snvindel.vcf",
    "content": "##fileformat=VCFv4.2\r\n##source=LUMPY\r\n##INFO=<ID=SVTYPE,Number=1,Type=String,Description=\"Type of structural variant\">\r\n##INFO=<ID=SVLEN,Number=.,Type=Integer,Description=\"Difference in length between REF and ALT alleles\">\r\n##INFO=<ID=END,Number=1,Type=Integer,Description=\"End position of the variant described in this record\">\r\n##INFO=<ID=STRANDS,Number=.,Type=String,Description=\"Strand orientation of the adjacency in BEDPE format (DEL:+-, DUP:-+, INV:++/--)\">\r\n##INFO=<ID=IMPRECISE,Number=0,Type=Flag,Description=\"Imprecise structural variation\">\r\n##INFO=<ID=CIPOS,Number=2,Type=Integer,Description=\"Confidence interval around POS for imprecise variants\">\r\n##INFO=<ID=CIEND,Number=2,Type=Integer,Description=\"Confidence interval around END for imprecise variants\">\r\n##INFO=<ID=CIPOS95,Number=2,Type=Integer,Description=\"Confidence interval (95%) around POS for imprecise variants\">\r\n##INFO=<ID=CIEND95,Number=2,Type=Integer,Description=\"Confidence interval (95%) around END for imprecise variants\">\r\n##INFO=<ID=MATEID,Number=.,Type=String,Description=\"ID of mate breakends\">\r\n##INFO=<ID=EVENT,Number=1,Type=String,Description=\"ID of event associated to breakend\">\r\n##INFO=<ID=SECONDARY,Number=0,Type=Flag,Description=\"Secondary breakend in a multi-line variants\">\r\n##INFO=<ID=SU,Number=.,Type=Integer,Description=\"Number of pieces of evidence supporting the variant across all samples\">\r\n##INFO=<ID=PE,Number=.,Type=Integer,Description=\"Number of paired-end reads supporting the variant across all samples\">\r\n##INFO=<ID=SR,Number=.,Type=Integer,Description=\"Number of split reads supporting the variant across all samples\">\r\n##INFO=<ID=BD,Number=.,Type=Integer,Description=\"Amount of BED evidence supporting the variant across all samples\">\r\n##INFO=<ID=EV,Number=.,Type=String,Description=\"Type of LUMPY evidence contributing to the variant call\">\r\n##INFO=<ID=PRPOS,Number=.,Type=String,Description=\"LUMPY probability curve of the POS breakend\">\r\n##INFO=<ID=PREND,Number=.,Type=String,Description=\"LUMPY probability curve of the END breakend\">\r\n##ALT=<ID=DEL,Description=\"Deletion\">\r\n##ALT=<ID=DUP,Description=\"Duplication\">\r\n##ALT=<ID=INV,Description=\"Inversion\">\r\n##ALT=<ID=DUP:TANDEM,Description=\"Tandem duplication\">\r\n##ALT=<ID=INS,Description=\"Insertion of novel sequence\">\r\n##ALT=<ID=CNV,Description=\"Copy number variable region\">\r\n##FORMAT=<ID=GT,Number=1,Type=String,Description=\"Genotype\">\r\n##FORMAT=<ID=SU,Number=1,Type=Integer,Description=\"Number of pieces of evidence supporting the variant\">\r\n##FORMAT=<ID=PE,Number=1,Type=Integer,Description=\"Number of paired-end reads supporting the variant\">\r\n##FORMAT=<ID=SR,Number=1,Type=Integer,Description=\"Number of split reads supporting the variant\">\r\n##FORMAT=<ID=BD,Number=1,Type=Integer,Description=\"Amount of BED evidence supporting the variant\">\r\n#CHROM\tPOS\tID\tREF\tALT\tQUAL\tFILTER\tINFO\tFORMAT\tsample-001\tsample-002\r\n2\t27313998\t606\tA\tATC\t59.61\t.\tCIPOS95=0,0;CIEND95=0,0;SU=6;PE=0;SR=6\tGT:SU:PE:SR:GQ:SQ:GL:DP:RO:AO:QR:QA:RS:AS:ASC:RP:AP:AB\t0/1:2:0:2:117:0.00:-4,-16,-61:70:66:3:66:3:66:1:1:0:0:0.043\t0/1:4:0:4:59:59.61:-15,-9,-43:61:52:8:52:8:52:6:2:0:0:0.13\r\n"
  },
  {
    "path": "tests/AnnotSV/test_24_HtzCompound/input/test1.snvindel.withoutGT.vcf",
    "content": "##fileformat=VCFv4.2\r\n##source=LUMPY\r\n##INFO=<ID=SVTYPE,Number=1,Type=String,Description=\"Type of structural variant\">\r\n##INFO=<ID=SVLEN,Number=.,Type=Integer,Description=\"Difference in length between REF and ALT alleles\">\r\n##INFO=<ID=END,Number=1,Type=Integer,Description=\"End position of the variant described in this record\">\r\n##INFO=<ID=STRANDS,Number=.,Type=String,Description=\"Strand orientation of the adjacency in BEDPE format (DEL:+-, DUP:-+, INV:++/--)\">\r\n##INFO=<ID=IMPRECISE,Number=0,Type=Flag,Description=\"Imprecise structural variation\">\r\n##INFO=<ID=CIPOS,Number=2,Type=Integer,Description=\"Confidence interval around POS for imprecise variants\">\r\n##INFO=<ID=CIEND,Number=2,Type=Integer,Description=\"Confidence interval around END for imprecise variants\">\r\n##INFO=<ID=CIPOS95,Number=2,Type=Integer,Description=\"Confidence interval (95%) around POS for imprecise variants\">\r\n##INFO=<ID=CIEND95,Number=2,Type=Integer,Description=\"Confidence interval (95%) around END for imprecise variants\">\r\n##INFO=<ID=MATEID,Number=.,Type=String,Description=\"ID of mate breakends\">\r\n##INFO=<ID=EVENT,Number=1,Type=String,Description=\"ID of event associated to breakend\">\r\n##INFO=<ID=SECONDARY,Number=0,Type=Flag,Description=\"Secondary breakend in a multi-line variants\">\r\n##INFO=<ID=SU,Number=.,Type=Integer,Description=\"Number of pieces of evidence supporting the variant across all samples\">\r\n##INFO=<ID=PE,Number=.,Type=Integer,Description=\"Number of paired-end reads supporting the variant across all samples\">\r\n##INFO=<ID=SR,Number=.,Type=Integer,Description=\"Number of split reads supporting the variant across all samples\">\r\n##INFO=<ID=BD,Number=.,Type=Integer,Description=\"Amount of BED evidence supporting the variant across all samples\">\r\n##INFO=<ID=EV,Number=.,Type=String,Description=\"Type of LUMPY evidence contributing to the variant call\">\r\n##INFO=<ID=PRPOS,Number=.,Type=String,Description=\"LUMPY probability curve of the POS breakend\">\r\n##INFO=<ID=PREND,Number=.,Type=String,Description=\"LUMPY probability curve of the END breakend\">\r\n##ALT=<ID=DEL,Description=\"Deletion\">\r\n##ALT=<ID=DUP,Description=\"Duplication\">\r\n##ALT=<ID=INV,Description=\"Inversion\">\r\n##ALT=<ID=DUP:TANDEM,Description=\"Tandem duplication\">\r\n##ALT=<ID=INS,Description=\"Insertion of novel sequence\">\r\n##ALT=<ID=CNV,Description=\"Copy number variable region\">\r\n##FORMAT=<ID=GT,Number=1,Type=String,Description=\"Genotype\">\r\n##FORMAT=<ID=SU,Number=1,Type=Integer,Description=\"Number of pieces of evidence supporting the variant\">\r\n##FORMAT=<ID=PE,Number=1,Type=Integer,Description=\"Number of paired-end reads supporting the variant\">\r\n##FORMAT=<ID=SR,Number=1,Type=Integer,Description=\"Number of split reads supporting the variant\">\r\n##FORMAT=<ID=BD,Number=1,Type=Integer,Description=\"Amount of BED evidence supporting the variant\">\r\n#CHROM\tPOS\tID\tREF\tALT\tQUAL\tFILTER\tINFO\tFORMAT\tsample-001\tsample-002\r\n2\t27313998\t606\tA\tATC\t59.61\t.\tCIPOS95=0,0;CIEND95=0,0;SU=6;PE=0;SR=6\ttT:SU:PE:SR:GQ:SQ:GL:DP:RO:AO:QR:QA:RS:AS:ASC:RP:AP:AB\t0/1:2:0:2:117:0.00:-4,-16,-61:70:66:3:66:3:66:1:1:0:0:0.043\t0/1:4:0:4:59:59.61:-15,-9,-43:61:52:8:52:8:52:6:2:0:0:0.13\r\n"
  },
  {
    "path": "tests/AnnotSV/test_25_big-ref-alt/command_Tcl.sh",
    "content": "#!/bin/bash -x\n\nset -eo pipefail\n\n\ncut=\"$ANNOTSV/tests/AnnotSV/scripts/cutWithColumnNames.tcl\"\n\n\n###################################################################\n## Bug: out of memory\n## In the VCF input file, some ref or alt values are very larges\n###################################################################\n\n## With AnnotSV \"2.2\" and before\n##    couldn't compile regular expression pattern: out of memory\n##    while executing\n##    \"regexp -nocase \"$refbis\" $altbis\"\n##    (procedure \"VCFsToBED\" line 116)\n\n\n## => Then bugfix added\n\n# ./input/input_1-big-ref.vcf\n# => ref with 43367 bp\n\nmkdir -p ./output\nrm -f \"./output/test_tcl.annotated.tsv\"\n$ANNOTSV/bin/AnnotSV -SVinputFile \"./input/input_1-big-ref.vcf\" -outputFile \"./output/test_tcl.annotated.tsv\" -genomeBuild GRCh37 &> ./output/output.log\n\nif [ `grep -c \"AnnotSV is done with the analysis\" \"./output/output.log\"` == 1 ] \nthen\n        echo \"Ok\"\nelse\n        echo \"error 1: AnnotSV does not finished\"\n        exit 1\n\nfi\n\n\n\n\necho \"ok - Finished\"\n\n"
  },
  {
    "path": "tests/AnnotSV/test_25_big-ref-alt/input/input_1-big-ref.vcf",
    "content": "#CHROM\tPOS\tID\tREF\tALT\tQUAL\tFILTER\tINFO\tFORMAT\tUnnamedSample\n3\t129763380\tpbsv.DEL.7916\tCACAAAAACACGTGCACACATGCACACACAGATGCACACAGACTCATGCAGACAGATACAGACACACATGCACACACAGATGCACACACATGCACACAGCCACATGCACACACTCACACGTATGCACACACATGCACATACACACATGCTTACAGACGCACATGCACACGTGCACATGCACACACATGCACACACGCACACGCACACGTGCACACGTGCACACACACGCACACACATGGACACACATGCACACATACACACACACCACTCCTTTTCCATTTCTCTAATTTCCAATTTTTTTCTATGAGCTTCCTCAGGCTCATGATCTTGATTCTAGAATGAATTCAGGGAGTAAGTCTGTATTATTGAAATGACACTAAATTCAATCATGCCTAAGAGGCTTTTTCAATGTTGGGGAAACCATCTCACAGATCATTCAAATGACCCCAGGAGACACTTCACCAGGAACACTTGTTCATCTCCCTCTCCCTTCTGCCAACCTCTGTGCTTTAATATCAGGGGACAAACCTCTCGATTTTGGTTTCTCATCTCTTTGTCCCCATGTACACTGGACTGCACTACTGTGTCAAAGCTACTTGCAGCCTGACCTGGGAAATGTACTTTTGGATTCACTCGATTTGCCACCTATTTGGGTGGTTTGGGCTGGAAACTGCCCTGCTCACACTCTTGGCTCCCAGCTGCTCCTGCTTTGGGGGTGCCTAGAGACCCCAGCTCAACCCATGGGTCACATCCCCACAGTGGGGCCGGGGATGCGACTGAGAGTTTTCTGGGCACCTCTCTCCAGCAGCATTGAGGATGGAGCTCAGCACTGTGTGACATTGGCTGGTGGCCACTGCCTGTTTAGGTCGAAATGGCCCAGCCTGATGTCCACATGCACCTCTGCGGCACACTGGCCTGCAGACCCCTGAGCATGCGCTGCATGCTTCTCACCTCTAGAGTGGCCACGCAGACAGGGATACCGACACACCAAGAAAATCCACAGGCAAGCCCAGAGGCCCCCGTTCTACTAGGGCTTTGTGAGCCCCTGTGATTTGAGTCACGAGCTTCTTGTGGTGATTTCATTTAGCTAACATCCAACACAGTGCATTTAGAGACTCTTTCTCTTGGACATTATATGGAGGCGTGGCCATGGTTTGCTGAGATAAATGCCCCAAAACACCCCTCAATAAAACCAAATAACAGCTCATCAACTCTTTACATTAAAAAAAAATTGACATCTTATAAATAGCAAATATTGGATGACAATAAGGCACAGGAAAAAGCTCATAAGCCCAGATCAGCAGTCATCATTCAATTGTTCCTTAACTACTGACTGCGCACCCGTTCTGTACCAGCACCGCATCCTAGATGCAGGGACACCACGCAAAATAAGATGACAAAGCACCTGCCCCTGTGGAGCTGAGCCACTAGCAGGAGAGACAGTCACTAAATGAATATCTCTATCCTGTGGTTTCTGGGAATGACAATCACATAAAAGGATAGAAAGGGATGGAGGAAAGCTAATTTAGACAACTCAGGATCAGAATGGGGAGGTGGTTGCATCCCTCAAAATTCAGAGTAGCTGGAGTGCAAGCCTTGTATTAGCTGAGCCTGAATCCTGGCCCTGCCGTTGTCCATGGTGTCCTCAGGCAAATGGCTCAACTCCTCTGACCACTGGCTTCAAGTGCAGAACAGGGGACCAGAGTCCCATCTCTCAGGGTTGTTGCTGTGGACTGAATTGTGTTCCCCCCAATTCACTCATTAGGAGCTAATTAACGTTAAAGGAGGTCATAAGAGTGGAATCCTAATCTGATAGGATTGATGGTTTTATAAAAAGAAGAGATGTCTCTGTCTCTGTCTCTCCCCCTCACTACTATGTGAGGACAAGCAAGAAGGCTGCTGTCTACAAGGCAGGAAGACAGCCCTTACCAGAAAGGGATTGGTGGATACTTTGATCATGAACTTCTAGCCTCCAGAACAGTGAGAAAACCAATGTCTGTTATTTAGGCCATCCGGTCTCGGGTACTTTATTATGGCAGCTGGGCTGGCTGAGGCAGTTGTTGAGAGGAACTGACAAGGTAGTTGGGGTAAAGCACACAGCATGGCCACAGCTCACTGAGCACAATGTCAGACTCATTCCCCTTCAATTGTTATTCTCTGTCTGGAGGATTTTCATGTTGGCTTTTCTCCAAGAAGCTCCCTGGGGTCTTTGTAAATATGGGGATATTTCTGACAAGAAAAATCCTTACGGTTCTTAACATTGACAATGATCAGGAACAGCAAGTCATGAAAATGAGAAGGTGGCTAGAAAAGAGAGGACCCACAGAAGAAACCAGCAACCACACAACACACACACACAGGAGGAATCCTAACGCAGGAGGAAAATAGAACATCAGGGGACCCCAAGACAGAACTCTGCATCTCATGTATTGAGATTATTCCCTGATATGGTTTGGCTGTGTCCCCACCCAAATCTCATCTGGAATTGTAGCTCCCCTAATCCGCATGTGTCATAGGAGGGACGTGGTGGGAGGTAATTGAATCATTGGGTGGGTCTTTCCCATGCTGTTCTCATGATAGTGAATAAGTCTCACAAGATCTGATGGTTTTATAAAGGGGAGTTCCCCTGCACAAGCTCTCTTGCCTGCTACCAAGTAAGACGTGACTTTGCTCCTCATTCACCTTCCACCGAGATTGTGAGGCCTCCTTAACCATGTGGAACTGTGAGTCTATTAAACCTCTTTCCTTTATAAATTACCCAGCCTCAGGCATGTCTTTATTAGTAGCATGAGAACAGACAAATACATTCCCTAAGCCTCTATTTTCCTCTGAGACAGGCTTACCCCGAATAGCCCTATCTTTGCAGGCCTTGAATAGTAATACTGTTATGTGTTACATTAACATGTATTTTACTGAAAGTCTCTGGTTTTTGTCTCTCTGAACATAGGCAGGCTTTGCTGAAACTTGCAGATGACATTCCAAAATTCATTCTATCTTAAGATAAGCAGAGAGGGGGGTGAGGAAAAATTGTACATACCTTCCCCTCAATGAAGAGGTCCCCGTGGTGTGGCCAGCCTTGGTATAAGGCTTTTGGCTCTGTTAATTCATGAGGGCTGAGTTTGATTGATCCTCATGGGGAAGACTAACAAGGGAATCCTTGGCAACCATTAGGAATAACACTCATGACCCAGAAAGTGGTTCTGTCTTCATGAGGCATCATCTGTCTTGTTTACTAAGTGACCTTCTGGCTCATTTTTCTTCCAGCCAGGGCTGGAATTCAATAATTCTAGTTCCTTCCCAAATTTTAGAGCTGGGAAATGCATTCCTCGGGTTTCTACTTTTCAAAAGCAAACAATATCTGTGGAGCTCAACTCCTAAATAGTGTGACTTTGTCTGTTTATGTGGTTCTCTTGCTGACTGCCTGGTTGCGACTGTGCCTGAACTCAGGCCTCTGTGTTTCTGAATCTTAGAAGCAGTGGTTGGCATGTCAAACTTGAAGTCATTGTCCTTTAGTTCTCTGAGTGTTATAATTGAACAGCACATTTATGAACAAGACTTTAGTAAATCCATCAGCATTCTAGGAAGCTTTGATTCATTAACCTATCTCTAATGTAAGCAAAGGCTGCCAGAGAGTCGCTAACAAGAATTCCATCTTTCTCAGAACCTTCGATTCGCTTGGGTCGAAGTTCATGCCTGTTTCATGAAAAATGCAAAACCAATTAATCACAGCTGTTCATAGTATGCCTATTCTAAGAGACCTCTGCTGTTCCTACCCGAGGGACAGCCAGAATAATTAAAGTCACAGAAATCAAACAAATGGGCCTCTGGCTAAATTATAGAAGATTAACCCAGGAAGAGCACTTATTAAATAGTAAGGAGTCCCCGAAAATATTCAAGTACAAAAAGGATTAGAAATTGTTTTAAGTGTTGGTTCCAACTTCAGGTGCTGGTCTTCCACTCCACTGCGGAAGGGAACAAATGAATTTTCCCATCCTAAAGACAGTGACATTCATCACACCCCTTGGAAGCTTAATAACATCTCGCTTTATTTTAATTGTTTATTTATTTATTTATTTACTTTTGAGATGAAGTTTCACTCTTGTTACCCAGGCTGGAGTGCAATGGCACGATCTCAGCTCACTGCAACCTCTATCTCCTGGGTTCAAGCGATTGTCCTGCCTCAGCCTCCTGAGTAGCTGGGATTACAGGCACATGCCACCATGACCAGCAAATTTTTGTATTTTTATTAGAGATGGGGCTTCCCCACGTTGGCCAGGTTTGTCTCGAACTCCTGACCTCAGGCAATCTGCCTGCCTCGGCCTCCCAAAGTAATGTGATAATGCCTGTTATCATGCTGGGATAACAGGCTTGAGCCACCACCCCCGGCCAATAATATCTCATGTTAAGCATGGAGTTGCTGTCCGCTCTGTGGCCAGAGATAAAACAAGCCTCCATTACAGAGGGAGGTGGTATTGGGCTACTTTTTTGGAAACAACAGCAAAACGTGAGGCAAATTTGCTTTTAGATCCTGGTTACACTCCTGGATGGAGCTTAGCAAGCCTATGATAGGGTAGCCTGGTGGTGGCTTAGGGGAATCCTAGCCATGTCAGACAGGACAGATGCCTTTGAGGAGAGATGGCACAGTGCTGGCTCTCAGGCCCCCACTGCAGGGGGACCAGGCTGTTTATGGATTGGGTGGGAACCCTGTTAGAAAAATAAGTGGAGGCTGGGTGTGGTGGCCTATGCCTGTAATCCCAGCACCTTTGAAGGATGAAGTGGGTGGATTGCTTTAGCCCAGGAGTTCGAGACCAGCCAGGGCAACTTGGCAAAGCCCTGTCTTTAGAAAAATAATAATAATAGTTAATTAATTAGTTGATTTTTTTTTTAAAAAAAGAAAGAGAAGTGGAGCTAAGGAACACAGAGCCTGCCAGAAAGCCAAGGTGGCCAGCTAGAAGGACACAGAAGAACATTACCATAGTTCTCTCTGAGCTTTTGGACTAGGGGTGTTTCATGTGGTTTTCATATCAAACATACTTTACTTTTATACTTAGGGAGGAAAGACATAATACATACAATAAAGGTAACACGAAACAAAACTCTCACCAAAGCCTCACATCTTAGATGCTCTACTGGGTCTCTGCAATTTCTATTAGGGACCCTATGGGTTTGAATTCCATTCTAGATTTGATAAGAAAATCCAAATGCTCAACCCCCTCAACCCCCCCCACCCCTCCACCCCATTTACAAAAGCCAAGTGAAAACTAAGGAGGGGCTGGGTGCAGTGGTTCACACCTGTAATCCCAGCACTTTGGGAGTCTGAGGTGAGGGGAACACCTGAGGTCAGGAGTTCAAGAGCAGCCTGACTAACATGGTAAAATCCCATCTCTACTAAAAGTACAAAAATTAGCAAGGTGTGGTGGTGGACACCTATAATCCCAGCTACCTAGGAGGCTGAGGCAGGAGAATCACTTGAACCCGGAGGCAGAGGTTGCAGTGAGTGGAGATTGTGCCACTGCACTCCAGCCTGGGTGAGAAAAAGCAAAACACCAAAGAAGAAGAAGAAAGAAAGGAAGAAAGAAAGAGAGAGAGAGAGAGGGAGAGAGGGAGGGTGGGAGGGAAAGAAAGAAAGAGAGAGAAAGAGAAAAAGAAAGAAAGAAAGAGAGAGAGAGGGAGAGACGGAGGGAGGGAGGGAAAGAAAGAGAGACAGAAAAAAAGAAAGAGAGACAGAGGGAGAGAAAGAAAGAAAGAAGAAGGAGAAGAAGGAAGGAAGGAAGAAAACAGGGAGAGAGAGAAAGAGAGAGAGAGGGAGGGAGGGAGGGAGGAAGGGAGGGAGGAAGGAAACTAAGGAGGAAGGTGGCGTGTACAGAGGTACGGAGGCCCTCAGGTCCTAGCTGGCCCTGGGTGACAAGGGTGAAACTCCGAAGCAAGAGAAAGGAAGGAAGGAAGGAAGGAAAGAAGGAAGGAAGGAAACTAAGGAGGAAGGTGGCGTGTACAGAGGTACGGAGGTCCTCAGGTGCTAGCCGGTACTGGTGCCTACACAGGATCCAATGGGCTGAGCTTTGCAAAAAGCTCATTGTGTAACCCAGGAAGCCCAAATTTACTTCTGAGCAGATGTCTTTTCAAAGTGATTTTCCTTTTAGGAAGTGAGAGGAGAATGAAGGGGAGGTTTATCCTACTTCTGATGTTAAAAAAGTCAAAACAAAATAAATTGGTGTTCATTGCAACTATTGGCTAAAGCACTATCATCACCAGGACCGGTACCTCAAACACACCTCCTGACAGCCTCTTCCATTCTAATCAATGTGTGCCCAACTGTGGTCACCCAGGGGCTGTTTACCTTTACTTAAAGAGAAATGCTGGTAGTAAGCCATAAAAATTACCATATTCACCATCTTTCTGCTTCAAAGAAGGTTTTAGATTAGGAATGGCTGGATCAATCACTATGAGCATGTTCTTGGGAACTAAAAGCCAAAAAGAAATATTTTAAATACGTGGTATATTTTTAAAATGTGGACTCTTAATAGATTTTTAAATGCAATGTAGATAAGATTTTAAAATCACTTTCCAAATCGGTGCAAGAGTCACTCCCTCTCCCTGTTAGATACACACACATACACACAACCCAATGCTATCCACGTGATCATCAAATCCTCCAGAGACATGGTTTTAGGCCCATTTTGCAATATTTAAAAAATGGAGAATAAAAACAAGATATGATATATCCATCCAGCAGAATTCACCTCAGTAATAAAAAGGAATGAAGGCTCGGCATGATGGCTTACACCTGTAATCCCAGCACTTTGGGAGGTCGAGGTGGACAGATTACTTGAGGTCAGGAGTTCGAGACCAGCCTGGCCAACATATTTGAAACCCCGTCTGTACTAAAAATACAAAGTTAGCTGGGCCTGGTGGCACACGGCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGGAGAATTGCTTGAACCCGGGAGGCAGAGGTTGCAGTGAGCGAACATCGCACCACTGCATTCCAGCCTGGGTGACAGCGTGAGACTTCAACTCTAAAAAAAAAAAATGAAGTACTGATATGATACATGCTACAACGTGGATGAACCTCTGAAACATTACATTCAGTTAAAGAAGTCAGCCATGCACACACACACAAAACCATCCATTGCATAATTCCATTTGTATGAAATATTCAGAAAAGGCAAATCTAGAGAGAAAGTAGATGTGTGGTTACCTGGGACCGGGGGGTTAGGAATGGGGCAGTTATGGCAAATGGGCATAAGAGAGCTTCGGGGGATTGTGAAAATGTTTTAAAACTGGAGGGTAGTGATGGTTGCACAACTCTAAATTTACTAAAAATCATTGAATTGTATTCACGTGTAATAGAATTTTAAGCAAAATAAACAACACCTCAATAGAGTGGTTAACTCTGGGCTGGGCATGGTGGCTCATGCCTGTAATCCTGGCACTTTGGGAGTCTGAGGCAGGTGGATCATTTGAGTCAGGAGTTCAAGACCAGCCTGGCCAACATGGTGAAACCCCGTCTCTACTAAAAAATACAAAAATTAGCCGGATGTGCTCACTTGAACCCAGGAAGTGGAGGTTGCAGTGAGCTGAGAGTGTGCCACTGCACTCCAGCCTGGGTGACAGAGCAAGACTCCATCTCAAAAAAAAAAAAAAAAATATATATATATATATATATATATATACACACACACACAGTGGTTAACTCTGAAGATGAGCTTCCCTGGACTTAGTAAAGCAAAATGACTGTGACCAACTCAAAATCCACCATTAAACTCTCCCAGCACCTGCTATTCTGCTTTCTACCCCAAGCTCTTTGCCTCTGTGTTTCCATCGTAAATCTGGAAAGAATTCGAAGACTCTGTGCTAAAGTGATTTGCTAAATATTATCAGAAAGGACTACAGAAAGATGCAGAGAGGATGGCAGCATGACCGACTCCTTTGAAGGTGGTTTAAGACTCTGCTGAACTGATGCTAAGAATAAGCCCTGGGATGTCAGAACCCCCAGGCAAAGCAGCTGGCAGATGACAACACTCGCTGAAACAGAGGGCAGAGCAGGAATTCTGCAGGCCAAGCACACTGCCGCAGGCTGGAAGAAGGGAGTGGAAACTGAATATTCCTCCTGCATAAAATTGCTTATTTTTGTTTGTTCCTCAGCCCAGCTGAGATCTTGGAGAAGTAGCAACAGGAAATGGAAAGAAAGCAAAAACAAACTGCAAATTCAATTGCACTGCTTTTTTAAAAAAGAACAAGTGAGACATCTTCAGCAGCAAGAAAACCTTGTTTCCTTTCTTGGAGGGCTTAACTAAATTCTTCTGGGGATGTCCCAGGATCAACAACCACAGGACATTCCTAGATTGTGAGTTTTCCATGTACAGGAGGCCCTGGTGCCTTCGTGCCCATCAGCAGCAAGGGAGACTTCCCAGGGAGGCCCGGTGAAGTTGCTGGAGGTGGCTGATGATTTCCAGGGCCTCGAGGAATGTCCCTTGGCTGTCCTCAGGGCACACCACTGATCCTGGGACCATGGCAGCTTCGGAGAGCTGAGCTGAGCTGCTGCAAAATGCTTTCTGCTTTAATTACCTCTCATTCATTTCTGAGCCCTGAGAAGGATGCAGTAGCCCGGGAAGTGTCAGCTCTCCCTGCCAGGGGTGGGACTTCTTTGTCATGTCTGCCTCTTGGCTTGTTCTCAAACTGTGGCTTCAGGAGGGCCTTGGCTCTTGGCAAATGCCAGAGGCTTTATAGTTTGAGAAAGAATCAGAATTTTGAAGAGGAGCTCAGAGAGGAAGGTCATTCTAGGGTGCACTTTGCAGAGTAACCAGGCAGTAAAAAGGTTAAATTGGCTGTGTATGACACAGGCCACTGCAGGGAATGTGCCCCTCTACTAAGTGAAATTGGCTCTGATATCCAGAGAATCTTTTAGGACCTTTAAAATCACCATTGTCAACACACTTGTCAGATTTTTGCATCTCCTTGTTTCAAACTGTTTTAGAATGAGGTCGGGGACTGGGGTGTGATTGATCACCATCCTGCTCCACTTCAGATATGTTGGCAAAAACACTAGGAACCACTCTTCATGGAGCTCCTACTGTGTGCAGGACCCTGTTCTCAACAGTTTAAACCAGGGCCATCTTCCTCCTCATCAACACCTTTCCTCTCCCACTCAGCAGCCTCAGTGTGTCAGCCCCTAGTGTGCAGCTAGTGTGCATACGCTAGTGTTCACCCTACAGGATGCTTCTCTTTGGAAGACTTAAACCACCAACCCAAGCTAAATTAGGCCCCCTCCACTGCTATAGTCTTCTTCCCTTTTCTAAAATAGCATTTGTCACAATAGGGCATGATGATGTGTCTGGCTATTTGGTTAATGCTTGCCTTTCTCCCTCCACTGTTCACCCCATGAAAACAGGACCGTGTCTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACAGAGTTTCACCCCTCTCACCCAAGCTGAGTGCAGTGGTGAGATCTCAGCTCACTGCCAACTCCACCTACCAGGTTCAAGTGATTCTCCTTGTCACAGCCTCCCAAGTAGCTGGGATTACAGGCATACGTCACCATGCCCAAATAATTTTGTACTTTTAGTAGAGATGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCTTGAACCACAACGCCCAGCATTAGTTTAGTTTTTCAGAGACAGGGTTTCACTCTATTACCCAGGCTGGAGTGCAGTGGTGCAATCATAGCTCACTGCAGCCTTGAACTCTTGGGCTCAAACCTAGGCTCAAGGGATCCTCTCGCCTCAGCTTCTCAAGTACCTGGGAATATATGAATGTACACCATGCCCAGCTTACATTTATTTGTTTAAAAGACAAGAAAGAGGCCAGGCACAGTGGCTCACACCCGTAATCCCAGCATTTTGGGAGTGAGGCTGAGGCAGGAGGATTGCCTGAGCCCAGAATTTGGAGACCAGTCTGGGAAACACAGCAAGGCCTCATCTCTAATTTAAAAAAAAAAAAAAAACAAGAAAGATGATATGATACCAAATCAAATCATTTCCTTTACTAGGAAAAGGGCAAAAACAAGGGACGGTGTCAGTTAAGAATCCCTCCTTAGAGAAGCATGAAAAGTCTGCCCCAAATCTGGTAAATCCAGGAACAACTGACTGTCAAGCTGATGGTGCATTCTAGGTTAGGATGTTTTGGACCAGGTTGTACTTTGTTCCCAAAGAATTCAAGGAAAATTTGTTTAATCTGCTTAACATAGTAAAATCTTTCTTTGCAATGTCATACAAAGTTGGCATTACATATGCACTGTTGAAGAAAACGTAATTTTTTTTAAAGAATGTTCTCCAAAACCATTTAATTAGTAAAAATGTTTAATAATGATTTGAATTTTTTTTTTTTTTTGAGACAGAGTCTCGCTCTGTTGCCCAGGCTGGAGTGCCGTGGCCTGACCTCTGCTTACTGCAAGCTCCACCTCCCGGGTTCATGCCATTCTCTTGCCTCAGCCTCTGGAGTAGCTGGGACTACAGGTGCCCACCACAACACCTGGCTAATTTTTTGTATTTTTAGTAGAGACAGGGTTTCACCGTGTGAGCCAGGATGGTCTCAATCTCCTGACCTCGTGATCCACCTGCCTTGGCCTCCCAAAGTGCTGGGATTACAGGCATGAGCCACCACGCCTGGCCCTTTGAGTACATTTTCTAAGAAGTTGGTCATGAGTTCAGACGTCTGCCTCAAAGAGATACTTGTGGTTTCCATTAAAGAACCCACTTTCCCTTTCTACAGGAGTATTTATGGGAGATATGGGCCTGGAGGTTGGAATCTATCCTGGTTGTACTTTGCTATACTGAAGTAAGGAGTAAACCTACAAATACATTCATATTGAAGTGTACAAAGGGGGCTCTACAATAGGTAGGAATTCTATTTAGTTTTGTTGGGTAACAAATCCTTTGAGAAGCAAATAACAGCTCACCTACAAAACTGGTGATCTGTATAAGTTGGGATTTTTCATGGATCAGTTTTGCTTGGATTGAACTATATAATCACAAATATATTTATACCTAGAGAGAGAGAAAGAGTGTCTGTTGAAACTGTATCATCTTAACGTGTCTATAAAAGGCAATACCTGGAAGGTGGTGGATGCCACACAGGTTAAGCTGTCTTCCCTCTGGGAGGCAGGCTTCTGGGAACTACACATTTGGTAATCTTGCCCATAAAATGCCAATTGAACACTTATTGTAGAATGCCGAGGGCACTGTAGATTCAGATAGTCCCCATCACAGGCATAGATGGTGTGTTTTTGCAGGAGTTTGGTTAGGTAACCTAGAAAATATTCAGTCGGGTTACAAAAGGCCCAGGAACCCACCAATCCTCCTTGGGTTTGGGGACAGGAGGATGTTGGTTCCCCTGGGGAAGGACTGTTGAGTTAACAACATGTGGGGTAGGGCCTCCCTAGCAGCTCTGGTGCAGAGGTCACAAAACCAGGCCCAGAGGTGAGACACAGGAGCCAATGTCAGCTTTAATTTTGATATGGAAGGGGGGCAGGGGAGTGCTGGGTAGAGAAGGGTGGGGACCCTCGCGAGGGCTCTGCCCTCGGGCTTGTGCCCTTGGACCTTAGTGAGAACAGGCACTCCTGTTTTCATGTCCAAATGTTGCATTTTCCAAGACTACTCTGGCCTGCTATGACCCCCATCCTGTGCCCATAAAAAACCCAAGACCCTAGTGGGCACAGACAAAAGTGGCTGGACATCAAGAGGAGCAGAGAAGCAGAAGAGGACACCGACAGACATCAGCAGATGCTGGCAGGCTTTTGACAGTGGGGAGATGTGGAATTCAGTTGGGGGTGGTTGGTGGAGAGTCGGGCTGCTAGACTCTAGGGGAAGACCACCTTCCCACTCCATCCCCCTTCTGGCTCCCCATCCATCTGAGAGCCACCTCCTCCACTCAATAAAATCTTGCATTCATTCTCCAAGTCCACGTGTGATCTGATTTTTCAAGTACACTAGGGCAAGAACCTGGGATACAGAAAGCCCTCTGTCTTTGTGATAAGGCAGAGGGCCTAATTGAGCTGATTAACACAAGCCACCTGCAGATGGCAAAACTGAAGGAGACCACTGTAACACATGCCCACTGGGGCTTCGGGAGCTGTAAACACCCAATTCCACAAGCTGCTGTGGGGCCAGAGCCCAGAAACGCTCCCAACGACCTGCCCGTCTGCACGCTCCCTCTAGGGGTTTGAGCAGCAGGATACTGAGAAGTGAGCCATGCCCCAGTAGCATGCCCTGCAAGGGGGATAAGGGTACTCCTCCTGTTTCAATGTATGGGTCAGAAACCTTGGTCTGGGATGGCCTACTGAATGGTTTGGAGGGCTCTTTCCCCTTCAGGAAGCACTAAGGTATTGGCCAGGAACCAAGAAGTCCTGAGCACCTTTATAAACCGGGAAAAAAAAATTGGGGTGAGTATCCCCTGGATGTGTGGATGCCCATCCTGAGGGAGGCTTTCATTTGCTCATCTCCCACTAGTGAGGCCATGCCTTATTGGGATGAGAGGATGCAGTTTCATTTCAAGAAATCACTCTTGGCTCTGTGTTGGTGCTGGAGAGGAAAGACAGGCAGGGTGCCCTGTGCAGAGAGGTGATGGTGGGGCTCTGCTGTGGGTTGAATGGTGTCCTCTCAAATTCATGTTTATCAATGTGGGGAAAAGAAAGAGAGATCAGATTGTTACTGTGTCTGTGTAGAAAGTAGAAATAAGAGACTCCATTTTGTTAGGTACTAAGAAAAATTCTTCTGTCTTGAGATGCTGTTAATCTGTAACCCTACCCCCAACCCTGTGCTCTCTGAGACATGTGCTGTGTCAACTCAGGGTTAAATGGATTAAGGGCTGTGCAGGGTGTGCTTTGTTAAACAAATGCTTGAAGGCAGCATGCTTGTTAAGAGTCATCACCACTCCCTAATCTCAAGTACCCAGAGACACAAAACACTGCTGAAGGCCACAGGGACCTCTGCCTGGGAAAGCCAGGTATTGTCCAAGGTTTCTCCCCATGTGATAGCCTGATATATGGCCTCCTGGGAAGGGAAAGACCTGACTGTCCCCCAGCCCGACACCCCGTAAAGCATCTTTGCTGAGGAGGATTAGTGAAAGAGGAAGGCCTCTTTGCAGTTGAGATAAGAGGAAGGCATCTGTCGCCTGCTTCTCCCTGGGCAATGGAACGTCTTGGTGTCAAGCCCGATTGTATATTCCTTCTACTGAGATAAGGGAAAACCACCTTAGGGCTGGAGGTGGGACATGCTGGCAGCAATACTGCTCTTTAATGGATTAAGATGTTTATGTGTATGCACATCAAAAGCACAGCACTTAATTCTTTACCTTGTTTAAGATGCAGAGAGCTTTGTTGACGTGTTTTCCTACTGACCTTCTCTCCGCTATTACCCTATTGTCCTGCCAAATCCCCCTCTCCGGGAAACGCCTGATAATTGTCAATAAATACTAAGGGAACTCAGAGGCCGGTGGCAGCCTGACCGGCATGGGTCCTCCATATGCTGAACGCCGGTCCCCTGGGCCCTATTTTCTTTCTCTATACCTTGTCTCTGTGTCTCTTTCTTTTCCAGGTCTCTCATTCCACCTAACGAGAAACGCCCACAGGTGTGGAGGGGCAACCCACCCCTTCAATCAGGAACCTCAGAATGTGACATTTGGAAATTGGGAGGTTGCAGATGTAACGAATTAACTTGGCGACATACTGGAGTAAGGTGGGCCCTTCACACCCTATGACTGGTATCCTTATAAGAAGAAAAGAAGAGACTCAGAGGGAAGACAGCTGTGTGCAGCTGGAATGATGCATCTGAAGCCAAGGAATGCCGTGCATTGCCGGCCACCATCCAAAACTAGAAAAAGTCAGGAAGGATTCTTCCCTAGAACCTTCAAAGGCAGTACAGCCCTGCCAACACCTGCATTCAGCCTCTGGCCTCCAGAACTGTGAGAGGATGAATTTCTGTTGTTTTCAGCCACCCAAGCTTAGGAAATGGGTTGCAGCAGACTGGGAATAAGACAGGCAGCCAGTCAGCCTCCGTGGAATTCCCAGGCAGCTTGCAGGAGCCAGAGTGGGCCCTGGGCTCTGAGAAGGTCTGAGGCCCAGCAGGCGCAGGGGCCTAAACTATTTCTCGGCAAGGAGGAAGGAAGGTTCATCCAGAACGTAGATCCCCTTCCTCCTTCTGACACCTCACGAGGTCACAGCGAGGTGGCTGGGAGGAGAGCCAGGAAGTTTTCACTGAGGTGTGTGGGAGACAGCTTGGCAGCCCTTGGTCTCTGAAGGGAGGAGGTGGTGTGAAGGAGGGCAGCTTCAGAACTTCCCAGTTCCTGCCTGATGACCTGTGTGTAAAGTATTCCCGTTTAGGTTTCAACATCCTCTCAGAAATATAATTCTCAGAAAATCCAGGCACCCAATCCAGCTCCCTGGCATTCCCTGAAATCTGAAGTCAAAGGGGCTGAGCCAGCCTGCCCTGGGTGTCAGGTCTCTGAGCCCAAGATAAGCCATCATATCCCCTGTGACCTGCACATACACATCCAGATGGCTGGTTCCTGCCTTAACTGATGACATTCCTCCACAAAAGAAGTGAAAATGGTCTGTTCCTGCCTTAACTGATGACATTCCTCCACAAAAGAAGTGAAAATGGTCTGTTCCTGCCTTAACTGATGACATTGTCTTGTGAAATTCCTTCTCCTGGCTCATTCTGGCTCAAAACCTCCCCCACTGAGTACCTTCTGACCCCCACTCTGCCTGCCAGAGAACAAACCCCCTTTGACTGTAATTTTCCTTTGCCTACCCAAATCCTATAAAATGGCCCCACCCCTATCTCCCTTTGCTGACTCTCTTTCAGACCCAGCCCACCTGCACCCAGGTGAAATAAACAGCCATGTTGCTCACAAAGTCTGTTTGGTGGTCTCTTCACATGGACGCACATGAAATTTGGTGCTGTGACTCGGATGGGGGGCCTCCCTTGGGAGATCAATCCCATGTCCTCCTGTTCTTTGCTCCATGAAAAAGATCCGCCTACAACCTCAGGTCCTCAGACCCAGCAGCCCAAGGAACATCTCACCAATTTTAAATCCGGTAAGCAGCCTCTTCTTACTCTCTTCTCCAACCTCTCCCTGTCCATCAACCACTTTCTCCTTTCCAGTCTTCAATCTCTCCATTCTCTTAATTTCAATTCCTTTCATTTTCTGGTAGAGACAAAGGAGACACGTTTTATCCGTGGACCCAAAACTCTGGCACCGGTCATGGACTGCGAAGGCAGATTTCCCTTGGTGTTTAATCATTACAGGGATGCCTCTCTGATTATTCAACCACGTTTCAAAGGTGTCAGACCACCCAGGGACGCCTGCCTTGGTCCTTCACCCTTAGTGGCAAGTCCCGCTTTTCTGAGGGAGGGACAAGTACCCCAACCCCTTCTCTCCATGTCTCTACCCCTTCTCTGCTTTTCTGGGGGAGGGGCAAATACCCCTCAACCCCTTCTCCTTCACCCTTAGTGGCAAGTCCTGCTTTTCTGGGGGAGGTGCAAGCACCCCAACCCCTTCTCTCCATGTCTCTACCCCTTCTCCACCTTTCAGGGGGGCAAGAAACCCCCAACCCCTTCTCCTTCACCCTTAGTGGCAAGTCCCACTTTTCTGGGGGAGGTACAAGTACCCCAACCTCGTATCTCTGCACCCCAATCCCTTATTTCTGCACACTGGCCCCTTTTCTCTGTGCCCCAATCCCTTATTTCCACACCCTGACCTCTTATATCTCTGCACCCCAATCCCTTATTTCCATGCCTGGACCTCGTATCTCTGTGCCCCGACCCCTTTCCCACTTTTCTGTAGGGTAAGAACCCCTGAACCCCTTCCCTCCGTGTCTCTACTCTCTCTTTTCTCTGGGCTTGCTTCCTACACTATGGGCAACCTTCCACCCTCCATTCCTCCTTCTTCTCCCTTAGCCTGTATTTTTAAGAACTTAAAACCTCTTCAACTCTCACCTGACCTAAAATCTAAGCATCTTATTTTCTTCTGCAATGCTGCTTGACCCCAATACAAACTCAACAGTAGTTCCAAATAGCCAGAAAACGGCACTTTCAATTTTTCCATCCTGTAAGATCTAAATAATTATTGCCGTAAAATAAGCAAACTGTCTGAGGTGCCTGACTTCCAGACATTCTTTTACACATCAGTCCCTTCCTAGTCTCTGTGCCCAAAGCAACTCGTCCCAAATCTTCCTCCTTTCCCTCCCGCCTGTCCCCTCAGTCCCAAACCCAAGCATTGCTGAGTCTTTCTAATCTTCCTTTTCTACAGACCCATCTGACCTCTCCCCTCCTCCCCAGGCTGCTCCTCGCCAGGCCAAGCTAAGTCCCAATTCTTCTTCCGCCTCCACTCCTCCACTCTATAATCCTTTTTTCACCTCCCCTCCTCACCCCGGGTCCGGCTTACAGTTTCATTTCATGACTAGCCCTCCCCAAGCTGCCCAGCAATTTGCTCTTAAACAGGTGCCTGGAGCTAAAGACATAGTCAAGGATAATGCTCCTTTTTCTTTATCCCAAATCAGATAGCATTTAGCCTCTTTTTCATCAAATATAAAAATCCAGCCCAGTTCATGGCTTGTTCAGCAGCAACCCTGAGACGCTTTGCAGCCCTAGACCCTAAAAAGTCAAAAGGCTGTCTTATTCTAAATATACATTTTATTTCCCAATCTACTCCCGACATTAAATAAAACTCCAAAAATTAAATTCTGGTCCTCAAACCCCACAACAGGATTTAATTAACCTCACCTTCAAGATGTACAATAATAGAAAAAAGTTGTAATTCCTTACCTCCACTCTGAGACAAATCCCAGCCACATCTCCAGCACACGAGAACTTCCAAACGCCTGAACCGCAGTGGCCAGGTGTTCCTCCAGAACATCTTCCCCCAGGAGCTTGCTACAAGTGTCAGAAATCTGGCCACCAGGCCAAGGAATGCCTGCAGCCCAGGATTCCTCCTAAGCCACGTCCCATCTGTGCGGAACCCCACTGGAAATCGGACTGTTCAACTCACCTGGCAGCTGCTCCCAGAGCCCCTGGAACTCTGGCCCAAGCTTCTCTGACTGACCCCTTCTCAGCTTAGTGGCTGAAGACTGACGCTGCCTAATTGCCTCGGAAGCCCCATAGACCATCATGGATGCCGAGCTTTAGGTAACTCTCACAGTGGAAGATAAGTCCGTCCCCTTCTTAAGCAATATGGAGGCTACCCACTCCACACTACTTTCTTTTCAAGGGCCTGTTTCCCTTGCCTCCATAACTGTTGTGGGTATTGACGGCCAGGCTTCTAAACCTCTTAAAACTCCCCAACTCTAGTGCCAACTTAGACAATACTCTTTTAAACACTCCTTTTTAGTTATCCCCACATGCCCAGTTCCCTTATTTGGCCAAGACACTTTAACTAAATTATCTGCTTCCCTGACTATTCCTGGGTACAGCCACACCTCATTGCCACGTTTTCCCCCAGTTCAAAGCCTCCTTCACATCCTCCTCTTGTATTACCCCACCTTAACCCACAAGTATAGGATACCTCTACTCCCTCCTTGGCGACCGATCATGCACCTCTTACCATCCCACTAAAACCTAATCACCCTTACCCCACTCAATGCCAATATCCCATCCCGCAGCATGCTTTAAAAAGGTTAAAGCCTGTTATCACTCGCCTGCTACAGCATGGCCTTTTAAAGCCTATAAACTCTCCCTACAATTCCCCCATTTTACCTGTTCTAAAACCAGACAAGCCTTACAAGTTAGTTCAGGATCTGCGCCCTATCAACCAAATTGTTTTGCCTATCCACCCCATGGTGCCAAACCCATATACTCTCCTATCCTCAATACCTCCCTCTACTACCCATTATTCTGTTCTGGATCTCAAACATGCTTTCTTTACTATTCCTTTGCACCCGTCATCCCAGCCTCTCTTCGCTTTCACTTGGACTGACCCTGACACCCATCAGGCTCAGCAAATTACCTGGGCTGTACTGCCACAAGCCTTCACAGACAGCCCCCATTACTTCAGTCAAGCCCAAATTTCATCCTCATCTGTTACCTATCTCAGCATAATTCTCATAAAAACACACGTGCTCTCCCTGCTGATCGTGTCTGATTAATCTCCCAAACCTCAATCCCTTACAAAAGAACAACTCCTTTCCTTCCTAGGCATGCTTAGTGCGGTCAGAATTCTTACACAAGAGCCAGGACTGCACCCTGTAGCCTTTCTGTCCAAACAACTTGACCTTACTGTTTTAGGCTGGCCATCATGTCTCTGTGCAGTGGCTGCTGCCACCCTAATACTTTTAGAGGCCCTAAAAATCACAAACTATGCTCAACTCACTCTCCACATTTCTCATAACTTCCAAAATCTATTTTCTTCCTCATACCTGATGCATATACTTTCTGGTGGCCCGGCTCCTTCAGCTGTACTCACTCTTTGTTAAGTCCCACAATTACCATCATTCCTGGCCCGGACTTCAGTCTAGCCTCCCACATTATTCCTGATACCACACCTGACCCCCATGACTGCATCTCTCTGATCCACCTGATGTTCACCCCATTTCCCCACATTTCCTTCTTTCCTGTTCCTCACCCTGATCACGCTTGATTTATTGATGGCAGTTCCACCAGGCCTAATCGCCACACACCAGGAAATGCAGGATAAGCTATAGTACAAGCCACTAGCCCACCTCTTAGAACCTCTCATTTCCTTTCCATCATGGAAATCTGTCCTCAAGGAAATAACTTCTCAGTGTTCCATCAGCTATTCTACTACTCCTCAGGGATTATTCAGGCCCCCTCCTTTCCCTACACATCAAGCTCAGGGATTTGCCCCCACCCAGGACTGGTAAATTAGCTTTACTCAACATGTTCCGAGTCAGATAACTAAAATACCTCTTGGTCTAGGCAGACACTTTCACTGGATAGGTACAGGCCTTTCCTACAGGGTCTGAGAAGGCCATCACAGTCATTTCTTCCCTTCTGTCAGACATAATTCCTCAGTTTAGCCTTCCCACCTCTATACAGTCTGATAACAGACCAGCTTTTATTAGTCAAATCAGCCAAGCAGTTTTTCAGGCTCTTAGTATTCAGTGAAACCTTTATATCCCTTACGGTCCTCCGTCTTCAGGAAAAGTAGAACGGACTAAAGGTCTTTTAAAAACACACCTCACCAAGCTCAGTCAGCAACTTAAAAAGGACTGGACAATACTTTTACCACTTTCCCTTCTCAGAAGTCAGACCTGTCCTCAGAATGTTACAAAATACAGCCCATTGGAGCTCCTGTATAGATGCTCCTTTTTATTAGGCCCCAGTCTCATTCCAGACACCAGACCAACTTAGACTGTGCCCCAGAAAAACTTGTCATCCCTACTATCTTCTGTCTAGTCATACTCCTATTCACTGTTCTCAACTACTCATACATGCCCTGCTCTTGTTTACACTGCCGGTTTACACTGTTTCTCCAAGCTATCACAACTGATATCTCCTGGTGCTATCCCCAAACTGCCACCCTTAACTCTTGAACTAAATAAATAATCTTTGCTGACAGGACTATGCTGAATCTCCTTAGGCACTCTCTAATCAGATGTCCTAGGTCCTCCCAATTCTTAGACCTTTTATACCTGTTTGTCTCCTTCTCTTATTCCATTTAGTTTTTCAATTCATACAAAACTGTATCCAGGCCATCACCAATAATTCTAAATGACAAATGTTCCTTCTAACAACCCCACAATATCACCCCTCACCACAAAATCTGCCTTCAGCTGAATCTCCCCCACTCTAGGTTCCCACGCCGCCCCTAATCCCGCTCGAAGCAGCCCTGAGAAACATCGTCCATTATCTCTCCATACCATCTCCAAAAATGTTCGCTGTCCCAACACTTTACCACTATTTCCTTTTATTTTTCTTATTAATATAAGAGGACAGGAATGTCAGGCCTCTGAGCCCAAGCTAAGCCATCATATCCCCTGTGACCTGCACGTACACATCCAGATGGCCGGTTCCTGCCTTAACTGAGGCATTCCACCACAAAACAAGTGAAATTGGTCTGTTTCTGCCTTAACTGATGACATTGTCTTGTGAAATTCCTTCTCCTGGCTCATCCTGGCTCAAAACCTCCCCCACTGAGTACCTTGTGACCCCACACTGCCCACCAGAGAACAACCCCCTTTTGACTGTAATTTTCCTTTACCTTCCCAAATCCTATAAAACGGCCCCACCCCTATCTCCCTTTCCTGACTCTCTTTTCAGACTCAGCCCGCCTGCACCCCGGTGAAATAAACAGCCATGTTGCTCACACAAAGCCTGTTTGGTGGTCTCTTCACGCGGACGCGCATGAAACTGGGGTCCTCATGCCCACCAGTCCAGAGTGCTCTCTAGAGGAAGGCTACAGACACTTCCTGGCTCGCTCATCCAGACGTTAGCTGTCTTGCTGAAATGCCTTTTTTCACCCTTGAAAACCACTGGAAGAATGGCCAAGAACCCAGCTATCCTGAGTAAGTTCACTTAGAGAAGCAAAATCTAACATGAGTCGCAAAATGGACACTGGCACCAGGAGTGTGGGTCAGAATCCTGCCCCTTGGAACTACATCATCGCTTGTACAGTGTACCCCCCAGGCACCAAGAGACCAGGCCGAGACCCTTCAGTGGCCCTGGGCCTCTGGTCAGTGTCTTCCTGCCTGGCACACAGGCAGGCCCTCATAAAGCAATGAGTAGTGAAAGTTCCAGCCTTCTTGATGGGTTCTCAGCACCCCGTCGTGAGCCACACCCTGCCCCAGGGAAATCAGGATCACCCTGATGCTACCCCTAGGCCAGTGCCCCTTCTGAAGTGCCCCAGGCTGGCACCTCTATACTTAGATCTCTTCAGCCTCCTCATGAAAACCTTGTCCATCACCCCAGCAGTCCTGACACTGTGCTAGATGAGCAGCTGACCACACGTCAAATCAATTTTCAGAGTTTGCCTTTGGTTTAATATTGACGGCTCATCCAAAAGACCTTGTCACTATAGCTAGATGAAAAAAATGACAAGGCTCTGGAGAAGCAGAGCCACAACATGGAAGATACCTGGGTCCCAGGTTCAGGAGGAGAGGAGCTGCCTGCTCCAGACTGTCACATGAGTGGGAATGAATCTTTTTCTACGTGTAGACCATTACCTTTCTTCACTCTGTCACATAGTCTATCCCCGCTAAACAGAAATTGACCTCCACCAGACCGTTTACATCAAGACCTGTATGTGCAGTGCAGTGGCCTGAGCCTCCAATCCATGCCCCACCTAGCCAACCGGCCTTGCCATATTCTTACTCTGAGAGTGGTATTCTGGGGACAGAAGCTCAGTGCATAGAATTGACTAATGCCAGATCCTTCAGGCGCTTTGCACTTTGAAGTCTATCTGTCCTAGCACATTCCAAGTACAAAGAAGACACTTCAGCAGTACAACCTGGCCTACACCCAGTTCAATTCCTTCTTCAAAAACCTAGGCCCGGCCAGGTGTTGTGGCTCACATCTGTAATCCCAAAACTTTAGGAGGCTGAGGCGGATGTATCACCTGAGGTCAGGAGTTCGAGACCAGCCTGGCCAACATGGTGAAATTCCATCTCTACTAAAAATGCAAAAAATTAGCCGGGTGTGGTGGCACGCCCCTGTAATTCCAGCTACGCTGGAGGCTGAGGTGGGGGAATTGCTTGAACCCTGGAGGTGGAGGCTGCAGTGAGATGAGATTGTGCCACTGCACTCCAGCTGGGGAAACAGAGCAAAACCCCATCTTAAAAAACAACAACAACAACAACAAAGAAACCTAGGCCCACATCCAGACAATGGAATGTTATTTAGCACTAAAATGAAATGAGCTATCTAACCACAAAAAGGCATGGAGAAACCTTAAATGCATATTCCTAAGTGAACGAAGCCCATCTGAAAAGGCCGCACACTCTATGATTTCAACTATGACATTCTGGATAAAGCAAAACTATGGAGACAGTGAAAATATCCATGGTTGCCAGAGGTCAGCAGAAAGGAGGAATGAATTGGTGAAAGACAGAGGATTTTTAGGGCAGTGAAACTACTCTGCGTGATACTACAATGGTGGATCCACGTCATTGTCCATATGTCCAAACCCACGCAATGTACAACACCAAGAGTGAGCCCTCATGTAAACTATGGACTCTGGGTGATAGTGATGTGTCAATGTAGGTTTATTGATTATGACAAATATCCCACTCAGGTTTGATATTGCTAGTGGGGAAGCTGCGCATGTGTGTGTGTGTGGCAGGTGGGAGTAGAGGTTGATGAAAACTCTGTACTTTCTGCTCCATTTTTCTTTCTTTCTTTTCTTTTCTCTTTCTTTCCTTTTCCCTTCCTTCCTTTCTTCCTTCTTCCTTCCTTCTTTCCTTCCTTCCTTCCTTCCCTCCCTCCTTCCCTCCTTTCTTTCTTTCTCTCTCTCCTTTGTGTTTTTCTTTCTTTTTCACCCAGGCTGGAATACAGTGGTAAGATCTCAGCCCACTGCATCCTCCACCTCCCAGGTTCAAGCAATTCTCTTGCCTCAGCCTCCCAAGTAGCTAGGATTACAGGCATGCACCACCACGCCTGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCATCATGTTGGTCAGGCTGGTCTCGAACTCCTGACCTCGTGATCTGCCCGCCTCGGCCTCTCAAAGTGCTGGGATTACACGTGTGAGCCACAGCAGCTGGCCTCTGCTCCATTTCTCTATGAACCTAGAACTTCTCTAACACATTAAGTCTATTTAAAAGGAAAAAAAAATCCCTATACCCAGGATAGCATTACCTTTGGGAGGAGAGGAGCTAGCGTAAGGGAGAGGAGAACGAGGAGCTCAGGCGAGATGGCCATGCCCTGTTCCTTGATCTGCATGGTGTGCATGTGTTTTACTTTGTGAAAGCTCACCCAGTTATCCACTTTGGATATGTAAACAAAAATGTTTAAGAAAACTTCACCTGCAGTTATCTGACCTACACTTTTAAACAATAAAGAAAGCCTAGGCACACAGAGCCTTGGGTAACTCATGGAGCAAGGGGGTGCGGAATGCCTTCTGTAGCCAGCCTCAGTCCCACGAGGATGGGCTGCTGGGTGACAGCAGGACAGGCTCATGAGGACCAGCCATCGCCCAAATGCTCTGGTCCTCCAGGCTGCCTGCCCATGTCTCAAGCTGTTTGGTCTACAGTGCCAAAAGGTCAAGAAGAAGGACAGTTAGAACAACCCCATGGTTTCAGCAACATGGAGGCCCTCAAGAACCATTTTGAAACCATATGGAATGGGGTGTGGGACAGAAGCATGTTTGGAAAAGGTTGAAAAGTGAGTGGAGGGGCCAGGTGTTGTGGCTCACACTTGTAATCCCAGCACTTTGGAAGGCTGAGGCAGGCAGATCACCTGAGATCGAGAGTTCAAGACCAGCCTGACTAACATGGAAAACCCCCGTCTCTGCTAAAAATACAAAATTAGCCGGGCGTGGTGGCAGGTGCTTGTAATCCCAGTTACTCAGGAGGCTGAAGCAGCTGAATGACTTGAATCTGGGAGGCAGGGTTTGCAGTGAGCTGAGACTGCGCCATTGCATGGCAGCCTGGGCAACAAGAGATAATCTCCACCTCAAAAAAAAAAAAAAAAAAAAAAGAAGAAGAAGAAAAAGAAAAAAGAAAAGTGAGTGGGAGGTAAGAAAGTCAAAGATGGTCCATGTAGTAGGCAGAATAACTGCCCCCAAAGATGTCCACAGGCCTTAATCCCCAGGCAGTGATTATGTTACCAGACATTCATGGTAAAAGGGACTTGGCAGATGTGATTAAGTTCAGGATTTTGAGTAGGGGAGATTATCCTGGATTATCTGGTAGGGGTTTATATAATCACAAGGGTGCTTAAAAGGAAGAAGGTGGCTGAGTGCAGTGGCTCACACCTATAATCCCAGCACTTTGGGAGGCTGAGGTGGGTGGATCACCTGATGTCAGAAGTTCGAGACCAGCCTGGCCAACATGGTGAAATCCCATCTCTACTAAAAATATGAAAATTAGCCAGGCATGGTGGTGCATGCCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCACTTGAACCCAGGAGGTGGAGGTTGCAGTGAACCGAGATTGCACCATTGCACTCCAGCCTGGGCAACAAGAGAAAAACTCCATCTCAAAAAAAAAGGAGGAAGGCAAGAGAGTCAGAGTCAGACAGTCAGAAAAAGGAGTTGTGACAACAGAACCAGCAGTTGGAACGATGAAGCCATGAGTCCAAGAATGTAGGCAGTCTTTAGAAACGGGAAAAGGCAAGGAAAAAGATTTTGCCTTGAAACCTCCAAAAGGAATGCAGCCATGCAGAAATCTTCATTGCAAACATCTGACTACTAGAACTGTAAGAGAATAAATGTGTGCTGTTTTAAGCCACTGAGTTTGTGGCAACTTGTTACAGAAGCAATAGGAATACTAGTACAGTTTGTATAGATGACTGTGGCAACAGTGTGGTGAAGATGAGAGAAACAGAGCTGTGCCAGGCGCAGTGGCTCACGCCTGTAATCCCAAAACTTTGGGAGGCTGAGGTGGGCAGATCATGAGGTCAGGAGATCGAGACCATACTGGCTAACACGGTGAAACCCCATCTCTACTAAAAATACAAAAAATTAGCCGGGCGTGGTGGCGGACACTGGGAGGCTGCTGCAGGAGAATGGCGTGAACCTGGAAGGTGGAGTTGCAGTGAGCTGAGATCACACTATTGCACTCCAGCCTGGGCGAAAGAGCAAGACTCCATCTCAAAAAAAAAAGAGAGAAACATAGCTGTAAGAAGTGATGTTCAGGGAGAGATTTTTAAATAATTATGATTGAGTTAAAGTTGAAAGAGGCTTGTGTGTATATGTATGTGTATAGATAAACACGTATGCAGATGACCCTTAGATCATAAGTATTCGATTTCTATTTTTTTTTCCCCCGAGACGGAGTCTCCCTTTGTCACCCAGGCTGGAGTACTGTGGCGCAATTTCGGTTGACTGCAACCTCCACCTTCCTGGTTCAAGCAGTTCTCCTGCCTCAGCCTCCGGAGTAGCTGGGATTACAGGTGCCCGCGCCATGCCCGGCTAATTTTTGTTTTTGGCCAGGCTGGTCTGGAACCCCTGACCTCAAATGATCCACCCACCTCAGCCTCCCAAAGTGCTGGGATTACAAGTGTGAGCCACTGCGCCAGGCTCATATGTATTAGATTTCTTATTGTGGGTTTTGGTCCGACAAGTTTGAAGGGGGATATTGTCGAGAGATTGCTCAAAATGATGAACCGCGGGCTCCAAGCTAATTATAAGAAAGGAAATGAGCATAGAAGAGGCGAGGGGCCCAAGGGATCAGAGATCCTGATGAGGACCAGCAAGGTCAGAGTGAGGGAATCACACAGCAGGCTGGAAAGGCAGGAGGCTGTGCCCACGATTTGTTTGAGGAATGATTTCAAGGTGGATTTGCAGGTTATGGAAACGTCCAGGAGTGGCCATGGAAAGAGGTAGAAGAGGTTGGTGCAGAAGGTTGCTGGAAACAAGGATGCCAGGACTGAGAGTGAAGATGCCCTGTGGACCAGGCATCTCCCAGGATGAAGGTAGGAAGTGGGGTGGAGCAGGAGCCAGCTGCCAATGTTGTCCTTAAACAAAAGGCAGTTGACAGATGAGCTGCTCCCAATCTCATGCCCTTTTGGGCATGCTCCTTTCCCGGTAGGCAAGCTCATGCATTCCAGTGTGCTGGGCACAGTCAGGCCACTGAACTTCCCACACCTTGGTTTCTTGGCTGGTTGAAGAGAGATCCTTTTTAAAGAACAACTACTAATGCAGCTGTTTATTAATGATTCCCTCCGGGTCAAATTAGCCATCATGTTGGATCAGTCAAAACTACTTTATTTCTTAATAATTTCAGCCAGAACTTGTACAGTCTAACTCTATTTGTGGGCAAGTATTTGCTATCCTGGAAGACGGCAGTTGTGCACACTCTGTTAAGAAATCAGTCCTGGAATCCAGTAGAGCCTGGAGATGTTCTGTTGATCCTTGTTAAACTGGTGAGGAGAGGAAATGGGAGGGTGTAGATTCTTTTCTTTTTTTCCTATCACCCAGGCTGGAGTGCAATGGCACGATCTCGGCTCACCGCAACTTCTGCCTCCCAGGTTCAAGCAATTCTCCTGCCTCGGCCGCCCGAGTGGCTGGGACTACAGGCGCGTGCCAGCATGCCTGGCCATTTTTTTTTATTTTTAGCGGAGACAGGGTTTCACCATATTGGCCAGGCTGGTCTCGAACTCCTGACCTCAGGTGATCCTTCTGCCTCAGCTTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACATGACCAGCTGGATGTAGACTCTTTTTTATCAGCTTCACATCACTCAGGGATCTTGGTACAGCTCATGTGTAACTCCAAGATACTCTTCCCTGTTGAATCCTCCCACTGTGTATCAGCAGAAACTCTTACAGCTACTGCCATGGCTAAAACCTTCCTCAAAGGAGTATCCTGAAAGGCTTGGGTAGAGCAAATCTTAGAAAAGCTTAGACCAAAGTTCTTAGGTTTCCATTTTTTGAATACAGATGAGGAGTTCACGACATGAACCCCTAAGAATGGAGGGAGCTCTCCTCTGTCTTCCGAAAGACACAGGGAAATCCTTCTTGGGATTGTCATCCTCATCACATTTACAATGAAAATCCATTAATATTCAAATAATCCAGTGACTATAGAAAGACCAGTGTGGGAGGAAAATAAATCTTGGGGCCCCATACTTACTAAGCCAAAGGGAACAGTCAAGCTGGGAACTGAGTCATGCAAACCTGCGTCCCATTTTGTTCCTAACTAAGATGGCTACAAAGATAAAAAGCTACATACATCGCTCACCTTTTGCCCACAAGGAGATTCCTTGCAGGCCCCAAGATCTTTATTGAAAACAGTTCTGTTGAATTTCACCCAGGCAATATCAACTGATAGCTTATCCACAGATGCAGGACGGGACAGGACAGAACTCAAAGTCATCCTTCTGCTTGCCTGAGAGCAATCAGAAATGTATATCTGATTTCTGATTGCTTCCTCTGCCCTATTGTTTACATTGTCTTATGTAATATTGCAGATTCCCTTAGCCAGACGAAGTGACAGCATGAATGACTATTTCCTCTACTCACTCTCATATGAAACTTGTATATTCCCCCAATATCCATCCTTTCCCCTTTAAATATTGAAGCCCTTAAAATTATCTTTGGAGAAAGGCATTGACCTGTCTCCCTGGTGGGTGTCCTTAACTTTGGCAAATAAACCCCTTAAAATGATTACAACTTGCCGCGGTCATTTTCATTGATTTATACCAGAATGAGGTAAATAACTGATTTTCAAAGAATCGTGATATGAGTCCCAAAGTGTTCTACGGGAGTGTGATATTGTGAAATATATATTTGATCTTTCACATGTTTCCTTCCATACAACTCCTAAAACCCTTAGAATCTCCAAAGTGATGTGTTTTGGTATGCTAATAAGTTGACTGATGGCTGGCAGCCCCTAGCTAGCTTCAGAATGGGGGCTAGTCCCTGGAAAGACCAAGGCAAGATTAGAGAGTTGGGACTTTGAGCCTAACCCCAACTTCTAGGGAGAGGAGAGGAACTGAAGGTTATATTGATCACTAATGGCCAGTGATTTAATCAATTGTGCCTAGGTAATGATGCTTCTATAAAAATCCAAAAGAATTGGGTTTGGAGAGCTTCTGTATAGCAGAACATGTACACGTTTCTGGAGGGCAGGGCACCCAAGGTGGGCATAGAAGCTCCACACTCCTTCCCCATCCCTTTCCCTGTGTGTCTCTTCATCTGTATCCTTTGTAATAGCCTTTATAATGAACTGATAAACATAAGTAATCTTCCCTAAAGTTTTTCTATGAACCACTCCATATTGATGGAACCCAAGGAGGGGGTTATGGGAAGCTCAACTTGAAGCTGGTTGTTCAAAAGTTCTGGAGGCCCAGATTGTGACTGCTGGGAGGAAGGGCAATAGTCTTGGGGACCGAGCCCTCAATCTGTGGGATATGATGCTATCTCCAGGTAGATGGTGTCAGAATTGAATTGGAGTATAGCCAGCTGGTATTTGCTGCAGAATTGATTGTTTGCTTGTTGGTGGGGAGGAATCCCCAAACATTTGGTCACAAAAATATTCTGTGTTGATTGTTGTTGAGTGAAAGAATAGAGAAAGTATTTTGAGTTTGTGTGTGTGTGTGTGTGTGTGTGTTTACACAACTGGTGTCAGAAGTGGGATTTTCTGGCCGTGGCCGTGGCTCATAGAAACATGTGCTTTGGGAAGAGAAAGAATGAGAGGGGCCGGGCACAGTGGCTCATGCCTGTAATCCCAGAACTTTGGGAGGCCGAGGCGGGCAGATCACGAGGTCAACAGATCAAGACCATCCTGGTTAACACAGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCTGGGCGTAGTGGCGTGCGCCTGTAGTCCCAGCTACCTGGGAGGCTGAGGTAGGAGAATGATGTGAACCTGAGAGGCGGAGCGTGCAGTGAGCCGAGATTTTGCCACTGCACTCCAGCCTGGGTGACAGAGCCAGACTCTGTCTCAAAAAAAAAAGAATGAGAGGATGGAGGATAAGGGACCTTTGATTCCTGGATGGTCACATGGTCACCCATGGTATGAAGTCACAGCTGTGCTGCACTCAGTTATTAAAGGTGAAAGTTACCACTGGAATTTGGAGATAGATCCAACTCTTGGGAAGTTGGTTCACTGGATGTGCAAGGAAATGCAAACTAATAACAAAGAAGTGAAATATTCACTCCTTTGCTTATTGTTATCTGTAATAGCTAAAATAAAAATAAAGGAGAGCGCTAGGTCCAGCCTCAATGCTACACCAACCTTAGATGTCAGTGAGTCTGAGCTTTGGCCACTAGCTTTGGAGCCATTCTCTAAGGGCAAAATTATGCGGAAACAACAGAAAATGCCTCTGAGACCTGTGGTTACTAAGAAGGTAGTGAATTTCGGGGAAGGGCAAAATTAAGTAACTACTGAAACGAAGGGGTAGAGTGTGAAGGAACTGTTTTATTTTGTGGTTCAGTATCTTCAACTCCCTAAGGGACCTTTACTAAAATGGACTGTGAGAGTAACTAATTTAGGGGCAGTATCTTTGGTTTTACATGCTGCAGAGGGGAGGAGCATGTTTGGGTTGATGCAGGATCCACAGCTCACTATGGAACAACCTCAGATGGCTATATACGATCTGGACATACAGCAGGCTATTCCTGAGGCAACAGCCAGCCTAGTAGACTGGATAAAAGCCTCCATAATGTGTGTTTACCCTGAGAAGGGGGACTGTCCAACTCCATCTATAAATGCCAAGTGGAGCGCTCCAGATGAAGCAGCTGACATGCTTTGTATGCAAGCCACATGGGACTGGCTTTATGGTGACTGGGATATCCACCCACTACATTGCCTGTTACCCAGGTCATGGGAAATGCTGTGATTAAGGGGCCCCATTTGCATGGACACCTCATGCAATCTCACTGCTGCAAAATCAAGCTATGTTTGGAGAAGACTTATTGAATTTGCTATCTCAGCTTCCCCTCATGGGTCTTATAGATGCTAATAAAAGACATTAGGGCAATTAATAAAATAATGTGGAAAAGCAGAGGACAGAGTCAAAGGACTCATCCCATGAAGGTGGATGTATTTAAGCAGTTATTAAGAGATAAAGAAATTAAAGAAAACATTAATAAATCTAAAACTAAGAGGAAAAAGGGAAGTGCCATGGGACTCATCGCAGGAGGCTGAAAACCCTTAGTGGTGCTTAAGAAATGAGACGAATAGAATGGAAATTGATGGGGTGAAAACAAAGGTCTTAATACAACACTATTGAAGGTTGGGTGGACCAAAAAGAGCCCTTGCTGGCTGCCAACATTAAGGAGTTCCAAATGGGTTTGCTGTATTCACCTTAGTTTGGAGAAATTTTAAAAGTCATTAAGCAGAGATTACAATGAGAAAGCTGATCAGCAATCACCTGGGCCAATGTTGAGGCAGGTTCATCCAGATAAAGATTGACAAAAGGGCCAAGGCTCCTTGGCTCAACCCTCTGCTGGCGACTCAAAGCCTTTTGCACTGGCTGGTGGAGAAGAGAAGCTCCTGGATCTAGAACTTAAAAATGTAAGGGTTGGTAGAATTATGAAAGTTGGTGCATTTGAACATGCTTCATATGAAATGTTTACATCTCTTTTACCTGATTGTATTAGGGAATGGACTTTGTATCTGACTTGTCCTTCAAGCAATATTAATGGGACGTGAGATGGGAGCCAGTAAGATTGCCCCCAGCCCGCAAAGTGCAGAGTGGAAGATGCTGAGCTGGGAGGGACATATTCTTTCGATAACCCCTCTATGGAGCCTCTAAAGCAGCATATGGCAAAAGCCTGTCACCGTCTCCCAGCGACAACTCCTGGCCCATAAAATGATCTTGACACCTGAAATACCCATGCTGTCTCAGGTGATGTCATAGAAACACTCTAATGAGGCTGGGCGCAGTGGCTCACACCTGTAATCCCAGCACTTTGGGAGGCCGAGGTGGGTGGATCACCTGAGATCAAGAGTTCGAGACCAGCCTGACCAACATGGTGAAATTCCATCTCTACTAAAAATACAAAAAATTAGCCAGGCGTGGTGGTGGATGCCTGTAATCCCAGCTACCTGGGAGGTTGAGGGAGGAGAATAGCTTGAACCTGGGAGGCAGAGGTTGCAGTGAGCCAAGATCACACCATTGCACTCCAGCCTGGGCGACAAGAGCAAGACTCCATTTCAGAAAAAAAAAAAAAAAAAAGAAACATAATAAAACGGAAATGGTTTATACAGCATCATGCTCTGTGGGGAATGCAGGGAGGAGATATTCCCAAGGAGGGAGCCTCTTTTCTCCTACAACTGACTCTGGAACAGTGAGGAGCTGCTGGATTCTCTCAACAGTTCGACAATGCCCTATATAACCAGCTCTCAACTCACTCACCCCCAGCTGTTTGGTCTATGGATGACAATTTTGAGGTGAACAAACAACATCCTGTTTGGAGGGCTGCTACTCTGGCTAAAGACTGTAAAAATCAGTCAGCTCAGTGAGTTGAATTGCATGCTGTTTTCCTAGCTGCTGATCTATACTAGAATGATGTCAATAACTGATTTTCAAAGAATCATGGTACATGTTCCAAAGTGTTCTACAGGAGTGTGATATTGTGAAATATATATTTGATCAGTTGAACAGTGGTAGCAGCCCCGTGTTTGGGTTTTTACTGACTCCTGGGCAGTGACCAGTGTCTTGGCTGTACACTCAGGCAAGAGGGCAATAGCTACCTGGCTTATTAACGGGACATCCATGTGGGGCAGAGCCCTGTGGAGATGTGAAAGATGTCTTGAAGTAGAACAGGTTCATGCCCATCAGAAAAACTCCCTTCCAGGCTCAGGAGATGGCTGGAGTCACCAAGTGAGTTTTTTTTGTGTGCTCCTGTGAGGTGGTCGCCTGGGTCCATGAAATGAGTGAACAAGGCGGTTCTGCAGCAGTGCAGAGATGGGCTGAATCTAGCCATGACCCTCGGGCTCAAAATGCCAATAACTATTCTGTCGCTGGTTGCGCTGGCTCAAGCCTGTAGTTCCAGCACTTTGGGAGGCTGAGGTGGGTGGATCACCTGAGGTTGGGAGTTGGAGACCAGCCTGACCAACATGGAGAAACCCCATCTCTACTAAAAATACAAAATTACTGAGGCGTGGTGGTGCATGCCTATAATCTCAGCTGAGGCAGGAGAATTGCTTGTACCCAGGAGGTGGAGGTTGCGGTGAGCCGAAATGACGCCACTGGACTCCGGCCTGGGCAACAAGAGTGGAACAACGTCTCAAAAAAATAAAAATAAAAAACAAAAAAAACTGTTTTGTCTCCCAGCAAGAGAAAAGAGACTGCCCATGGCTGTGAGGCACATTCCCTTGTGGGAAAGCTCTTAACATAACTGGCAAATGAGTTGGATGCTGGCAGCCCTGGGGTTCTACATCTAGGTCTTGACAGGAATAGACACTGTCTCTGGACTGGGCTTTGTTTGCATGGTAGAAGATGCAAACACTCAGAGTGCCACTAAAAAAAAAAAAAAAAAAAGGCCAGGCACGGTGGCTCATACCTGTAATCTCAATACTTTGGGAGGCTGAGGTGGGCAGATCACCTGAGGTCAGGAGTTCAATACCAGCCTGGCAAACATGGTGACACCTCATCACTACAAAAATACAAAAAAAATTAGCCAATCCCAGCTACTCGGGAGGCTGAGGTGGAAGAATCACCTGAACCCAGGAGGCGGAGGTTGCAGTGAGCCGAGATCGTGCCTTTGCACTCCAGCCTGGGAGACAGAGGGAGACTCTGTCTCAAAAAAAAAAAAAGGAAAAGAAAAAAAAAAAAAGAAAAGGAAAAAAAAAAACCAGAACAGGAGATACTGCATGAATCTTGATGGCCAACGTCATTGCTTCAGAAAAAGGAGCACTCTGTACAGCCCATAATGTCCAACAATGGGCAGAGAGGCATCCTCTTCAGAGTCATAATTTGGCACAGAAGTGGAAGAGGCAATTCAAACACTGATTGTCTAAAACGGGGGAGGTGAAAGCAGGAGGGCTGGTGATAGAGTTTGGAACTGTATCTCCACCCAATTGTGTGTTGAACTGTAATCCCCAGTGTTGGAGCTGGGGCCTGGTGGGAGGCAATTGGATCATGAGGGCAGGTTTCCCATGAATGGTTTAGCACTATTCTCTTTGGTATTGTACTCAGGATAGTGAGTGGGTTCTCATGAGATCTGGTCGTTAAAAAGTGTGTGGGGCCGGGCGTGGTGGCTCACGCCTGTAATCCCAGCACTTTGAAAGGCTGAGGTGGGTGGATCACCTGAGGTCAGGAGTTCAAGACCAGCCTGGCCAACATGGCAAAACCCCGTCTCTCGTAAAAATACAAAAAGTAGCCAGCGTGGCGGCGGGCGCCTGTAATCCCAGCTACCTGGGAGGCTGAGGCAGGAGAATCACTTGAGCTCAGGAGGCAGAGGATGCAGTGAGCTGAGATCACACCATTGCATTCCAGCTTTGATGACAGAGCAAGACTCTGTCTCAAAAAAAAAAAAGTGCACGGCACCTCCCCCAGTCATTATCTCTGGCTCCTGCTCCTGCCATGTAAGAGGACTGCTCCTCATTCATCTTCTGCCATGATTGGAAGCTTCCTGAGACCTCACCAGAAGCAGAAGTTGCTATGCCTCCCATACAGTCTGCAGAAGAGTGAGCCAATTCAACCTCTTTCCTTATAAATTACCCAATCCCATTGCTTCTCAGCCTTTTGGCTAAGATCAAGTATAAATTACCTAGTCTCAGATATTTCTTTATAGCAATGCAAGAATGAACTAATATAGCTGGCTTGCACGCTTTGTGAGTGTGCACTCATACTTAGCATGAGTGGTCTAAAGGAGTGGCCTTCCAGATTTTTCTCCATTTTTTTGGTTGATCTGGGGAAGGGGGGGGTGGGGAGGATGCTGACATGACCATGCAATTTTTTTTTTTTCCCGAGATGGAGTCTTGCTCTGTCACCCTGGCTGGAGTGCAGTGGCGCAATCTCAGCTCACTGCAACTTCTGCCTCCCGGGTTCAAGCAATTCTCCTATCTCAGCCTCCAGAGTAGCTGGGATTACAGGCACATGCCATCAGTCCCAGCTAATTTTTGTATTTTTAGTAGAGGTGGGGTTTCACCATGTTGGCCAGGTTGGTCTCAAACTCCTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGTGTGAACCACCGCACCCAGCCCAATGAACAGTTCTTGAATGAATGACACAATGAAGAACACTACCAGAACAAGAGCAGATCAAAGGTGAATAAGTGAGTAGTAGCTTCTATTAATCCTCATCAGCAACCAACATAACCCAGGGCTTATAGATTTCTCTATGTAATATGCTACACACACGTCTATGGAAAGAGAGAGAGAGAGAAGCACATCAGTCAACCAATTTTAAAAAGTTACTCTAAATGTGTTGGTCTTGTATTACAATCTTTAGATTACACTATTATTTTATTTCAAACAGGACTGGTAGAAACTTCTTCATGCCTTTTCAACCAAAGAACTTCAATACGGTGAAACCCCTAAAAATACAAAAAATTAGCCAGGTGTGGTGGCGGGCGCCGGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGAAGAATGGCATGAACCCGGGAGGCGCAGCTTGCAGTGAGCCGAAATTGCGCCACTGCACTCCGGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAATTCACACTTTGTTCTTTGATAAAGTACCAACCTTAGAAAGTTACGCAGCGAACACCATCTGACTTAGATTAACTGAAAAGTAACTGGATCAATCCCCCTTTACCCTAAGCATCTAAAGGGAACAATTTTCTTTTCTTTTCTTAGGGATGCAGCGTCCCTCAAACTGCAGAGCCACTTGGCGATGAAGCCAGGATCGCAGTGCATTTGATAACTTAATGCAAATTTTTACTAGCACTTAAAACTCAGATATGAAATCTATACTTGATCTTTTCTGCTTGGAATTGGTCAGATTAGTGGTTCTGCCCCGGCATACAACAAAAGGCTCTCAGAAACACTCATGGTCGCTAACCAATCAGAAGGACCAACAGAGCTCGACAAACAGACAGGAGGGTGGAAGGGCACCGCCTTCCACCCCACCCGCTTAGACAGCCTTTCAACTCTGCCCACTTTGAGGATCTGTAGGATGATCCAGGTAAGCATGATACCTATCTTAACTTCAAGGTAGAAATTAAGGCTTGAGTGCACTTATTTGGTGCCTTATTCATTTAATTGGAAGATTATATGGTAATTTCACTGCTCATAATAATTAAACCTTTTTTTTCACTTTGGGGATGATAATGACATTTGGAGAGTAGCACTATAAACCTCAAAAATCTATTTTGAAGATGACTGGACTTAAGAGCGGGACAGGTTTGCTGTACACTTGAGCGAACATGCTTTGTTCCCCAAAGCAGCAAAAAAGCCAGAGCCTGGAAGTTTCTAAAACTTGAAGCAGATGCAAGTGGCAGATCCAAAAAGCTGTGCCTAGAGAACAGATCGGTTGACCGGCTGTATCTATTCCATCCTCCCCAGTGACTCAGTGGAGGATTTCGGACAGGTCTCTCAGTTTCCCCTTCTTTGGTTTCACCTTAGAGTGAGGGGAAGTCACAGCATTTCTTCCTTTATATTTCACAGAAACACAGGAGGCTGGATTGACAGTCAGCAAATGTAAAGAAATACAGACGCCCACAGGGCAATTATGCTGGCCTGGCCTCAAGCTTCATATTCATCCTTAACTGATTCCCTGGCACACTCGCCAGTGACCTGGCTCCACTTCACCGAATGGACCCAAGGGCCCACACTTTCTTAATTCTCCTGTAGACCCTTTATTCACTCCCCTTCATCCTTCCTTTGCTGACGGTGGTCGCTTCTGACTGCCCCAATCTTTTTTTTTTTTTTTTTTTTTTTTTGAGATGTAGTCTCGCTCTGTTGCCCAGGCTGGAGTGCTGTGGTGAGATCTCAGCTCACTGAAACCTCCGCCTCCCCAGTTCAAGCGATTCTCCTGCCATGGCCTCCCGAGTAGCTGGGATTACAGGCATGTGCCACCACGCCTGGCTAATTTTTTTTGTATTTTTAGTAGAGACGGAGTTTCACCATGTTGGCCAGGCTGGTCTCTAACTCCCGACCTCAGATGATCCACCTGCCTGGCCTCCCAAAGTGCTGGGATTAGAGGCATGAGCTACCGAGCCTGGCCTCAATCTTATGCTTACTATTCTTCATCTGTTGTCTCATTTTATAGCCAGAGCTCAGGTGACAGCTGAGGGATTACATTCATCTGTCTCTGAGCCTCTGAGACTTCTATTTTCTTCACCACCCTCCAGGAATCCTTTTTTCTAGCTCTTGGGTGCTGGCCATCTCCTGGAAGGTTAAGTTGAAAATCTGACCTCCAGTTCATTGGTGCCTCTACAATCAATCCGCATTACCTGCAGATTCTGTAGCTGCAAATTCACCTACTTGATAATGTTTACTTTTAGCCCCTAAATCAATCCCAGCGGGGCTTTTCTGGATGTGCGCCGGGTGGTGAAGAGGTTGAATGGCTGATAAGCACGGTCCCAGCAGAGATCCATCGAGGAACCTCTGCCTTTTGGTTTCCGCTCTTATACCATAAATGAATGCCCTTTTCTTGGTCTTTTTGGGGTTTTTGTTTGAGACAGTCTCACTCTGTCACCCAAGCTGGAGTGCAGTGGTGTGATTGCAACCTCTGCCTCTCAGATTACAGTGATTCTCCTGCCCCAGCCTCCCGAGTAGCTGGGACTACAGGCATGTGCCACCACACACAGCTAATTTTTGTTTTTTAGTAGAGATGGGGTTTCGCCATATTGGCCAGGCTGGTCTCAAACTCCTGACCTCAGATGATCCACCTGCCCTGGCCTCTCAAAGTGCTGGGACTACAGGTGTGAGCCACAATGCCCAGTCTGGGTTCTCTTAAATGTAATGGAAAGAGGAGAATTGGAATGGCCGAGAGAGAGAACTAGGACCCTGCATGAATGAATCAAGTTGACTTGGAGAGAAACTGTATTTATAGGAAAGTCAAAGCTCTGAGTTTGGAGGCCAAGCAGGGTGGGGGTGAGCAAAGCTGTGGGAAGGAAAGCAGGGCTTCAAAAAACAGCTGCTCCTTCTTGATAGATGCAGGGAGGAAACAGGAAAGACCGGGGGCCATGTGGTGTTATTTGTAGCACTTGAATAGCTTGGCTCTTAGAGTCCCAAGGCCTCCAGCTAGTGATCCGCAGATGCCATTAGAGGGCAAAAGTGCTCGCTGCTCTCTCATTTGTCAACAAGAAGAGCTGGTATGGCCCTGGCCTTAAGGATAAGTTAGTCAATTGCTTATTGTACGTCACGAGATGAATGCTGGGAGAGAGGAAACACAGGGTGTGTAGGGAGAGGGCAAAAACGGCTACATCTGACCCACCCCAGAGATGAGGAAGGCTTCCAGGTGGGAGGTGACACCAGGAGGTAACCAGGTGGAAATCACCCTCAAGTAGCAGAGACAGGTGTGCAAAGGCTCAGAGGGAGCTTCTCCAGGATCAGCAGAGCTCGATTGTAGGGTGTGAGGCTGTCACAGAGGCTGGAGAAATAAGCAGTTCCTTGCTAAGAAGTCTGAATTTTAACCTGAAGGGACATGGGAGCTACTGCAGGCTGGTAAGCAGGGGGGTGGTGCTGGTTGGATTGCAATGCAGAGAAACCCTGGGTTGGCCTGCGTCTGATAGACTGGAGAGACCCTTGAAGAAATCAGGGTACAGGCAGTCCTCCGGAGTAGAAATGAGGAAGGTGCCAACTGAGACCACAGCAGTGGGGAAGAGTGTGAGAGGGATGGAAATTGAGATGAATTCATGGGTGTTTGGCCTGTGTAGTCACACAGGGTCCCGAGCTGAGAGGGACCCCGAGCTTGGCTTAATGCTCTGCTGTCACTGTCTTAAAATTCCTCCTCATTTTATGTGTGAATCTATGTTTTGTTTTGTTTTGAGAAAGAGTCTCTGTCGCCCAGGCTGGAGTGCACTGGCACCATCTCGGCTTACTGCGACCTCCACCTCCCAGACTCAAGTGATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGCCACCTGCCACCACGCCTGGCTAATTTTTGTATTTTTAGTAGAGAGTGGGTTTCACCATATTGGCCAGGCTGGTCTTGAACTCCTGATCTCAAGTGATCTGCCCACCTCAGCCTCCCAAAGTGCTGAGATTACAGGCATGAGCCCCTGCAGCCAGTCTGAATCTATGTTTTATCAGTGAAATCCAATGGGGCAATAGAACACGTGCGTGGGCAGACGAGACACCAACAATATGAGTTACCCCCGTCCCTTGCCACCGCACTCCCCATGGCGTGTCTGCTGTGCCCTGAGCATAGAATCTTGGGGGGTCCGCAGTGCATGGGAGCCCAGCAAGGCTCCAAGTGAGCATAAGGGAAGCCTACTATGTCCACAACGGAGTCTGCAAGAGATGCTGACAGCACCAAGAGGTTGCACTTTCTCTTATTATAGAATCAGAATTGAAAACCAAGTCAATGGCATTCTAAGAAACAGGAACAAACAAGGAACCCTCTCCCAGCCTTTTCTACTCATCTGATTCCCTGTAGTAACCAACCACTTCCACTGGAACTGATGACATAGGAGAGGCAAAGATAGCAGAGTCATAGTTGTTTTTCCTTTCAATTCTTCCTTATGCATCAGTAAGCCAAAGGTAGAGAGTGGTGGTAGATTGTATAGGTGTGAAAAAGTGAAATAAAAACAGCTGAATGGCCAGGTGTGGTGCTTCATGTCTGTAATCCCAGCATTTTGGGGGGCCGAGGTGGGTGGATCACAAGGTCAGGAGTTCGAGACCAGCCTGGCCAACATGGCGAAACCCCGTCTCTATTAAAAATACAAAAATTAGGCCGGTGTGGTGGCAGGCTCCTGTAATCCCAGCTACTCAGGAGGCTAAGGCAGGAGAATGGTCTGAACCCGGGAGGCAGAGGTTGCAGTGAGCTGAGATCTCACCCTGCACTCCAGCCTGGGCAAGAGAGCAAGACTCTGTCTCGGGAAAAAAACAAAAACAAACAAACAAACAAAAACAGATGAATTAGTTTCCTGCAACGTCTCACTGTTTCTGTGAGGCAAAAAAATGCCACATACAAAGTACAAATTACGTCATTTCTGTGATTCCACATTTGAGTCCAGTGTTCCTATTTAAATCTGGCATTGCACAATGTAAAGAGGAACAGTATAATCCATGCTAGTAATTTAAAATGTTAACTTTTTTTTTACTTGGAAGGACATTAAATAACAAATGAAAGCATCATGATAAATTGAGACACAGACACCACAGAAGAAAGAAAATGCTTTATATGTTAATACTTCAGCAGTGCTTTTTCCTCTGATTTTTGAATAAGGGGGCCCATGTTTTCATCTTGCACTGGGCCTTGCAAATTCTGCAGCTGCTCCTGACTGTAAAGAGGGGATTTAGCCATAAAATCAGCAAGGGTTGGTCGTGGGGATGTGGGGTACAGGAAGATAGAGGATTTAGGCATGGCTGCAGGGTTTTAAGCTGGTGGTACTGTTGGCTGGGAAATCTAGGAAATCCAGCATTGAAGGACCGGCTTTGTGAATCTGTTGTGGATGGGCTGAGCCTGCAGTGGCCATGGGGCATCCTGCCTGGGAGGAGGGCGAGCAGCAATTCATCAGCACAGATGGTGACTGAGGCTCAGGAGGGGCTACTGAGGTAGGAACTGTGGGCAGGGATGCTGGGGAAGCAGACATTGAGGAGATGGGACAACAGCTGGGTATGGTGGCTCACACCTGTAATCCCAGCTACTCAGGCTGAGACAGTAGGATAGCTCGAGGCCAGGAGTTCAAGATCAGTCTGCACAACATAGCGAGACCCCATTTCCCCCCCTCAAAAAAAATTAATAAAAAGTAAAAATGCAAAGAAGAGATGGGACAGCAAAGAAGGCCTCATAAAGGAGATGGAGAGGAAGGAGACAGGAGGAAAGGGGAGAGGGAAGGTGACAGCCAGAAGCAGGCATGAGAGGTTCCCTAGAGTGGGGTTTTATTATCTCAAGTGACCATGAGCAAATTACTGAACCTCTCTGTGCTGCAGACATCATGGATAAAAAGAAGCTAAAATGAAGACAATAACAGCAGCACTTATGGGCGGGGCGGTAGTGGTGAAGATTAAATGAAGAGTTTATACGGGAAGGGCTCAGAATGCTGCTGTATTAAATGCCTCAGTCTGCTATAAAAAGATACCACAAGCTGGATGGCTTAGAACTACAGAAATGCATCGTCTTACACCTGCAGGCCAGAGGGCTGAGATGAAGGGATTGTCAGGGCCAGGCTCCCTCTGAGGATGCTAGGGGAAGGATCTCCCTCCCAGCTTCTGCCAACTCCTTATCTTGTGGAGCAGAAGTCCAGTCTTCACGTGGTCTTCTCCCTGTGTGCATCTGTGTCCAAAATTTCCCCTTTCCATATATCTATGTCTATATCTACACACAAAAATACACATATATGTAGTGTGTGTGTGTATATATATAGAGATATATATAATTTTATTTATTTATTTATTTATTTATTTTGAGACAGAATCCTGCTCTGTCACCCTGGCTGGAGTGCGGTGGTGCAATCTTGGCTCACTGTCACTTCCGCCTCCCGGGTTCAAGCAATTGTCCTACCTCAGCCTCCCGAGTAGCTGGGATTACAGGTGCCCACCACTGTGCCCAACTAATTTTTTTGTATTTTTAGTAGAGACAGGTTTCACCATGTTGGCCAGGCTGGTCTTGATCTCCTGACCTCAAGTGATCCACTCGCCTCGGCCTCCCAAACTGCCAAGATTACAGACGTGAGCCACCGCACCTGGCCTCTTTTATTATTTTTTAATAGAGATGGGGGTCTTGCTATGTTGGCCAGGTTGGTCTTGAACCTTGGCCTCAAGTGATCCTCCTGCCTCAGCCTCCCAAAGTGCTAGGATTACAGGCATGAGTCACTGTGCCTGGCGTATTTTATTTATAATCTTTTTAATAGAGATAGGAGTCTCCCTATGTCTGCCAGGTTGGTCTTGAAACTTGGCCTCAAGTGATCCTCTTGCCTCAGCCTCCCAAAGTGCTAGGGTTACAGGCATGAGCCACTGCACCTGGCCAATTTCCCCTTTCCATAAGGACACGCATTATACTGGATAAAGCCCACTCTATCAACCTGATTTTAACTTGACTACCTTTGTAATGACTATCTCCAAATATGTCACATTTTGAGGTACTGGGGGTCAGGACTCCAAGAAGTCTTTTGTGGGAGAGGGGATGCAATTCAACCCACAACAGTGCCCTGCTCTGTGAAATGTTCACCTTTATGAATAAGACGACCTCCACGAGTTGTTTTCTTCAAAGGTATGAGGCAGAGACCAGTGAGGGGCAACCTGAGGGTGGGGAACCTAAATTTGCTGTGGCCACAATCTCCGCAAAAACGCAATGTTTCTCCCGCAGCACTTAGCAGCCCAGGTGAAGGTAAATACAAGAAGGAGAGGGAACAAAGATGAGGGAGTGACACATCCTGATAATGTGCCAAAGACAACCACAGGCAGACATACTGATGGCAGTGAGGCAGACGAGGAACACTGCTCATTGCTCTGCCTGCCTCACTTTTGTTCACGGGCCACCAGGAGGCCTGAGGTCCCAGGTGGACAGAAATCACCACGATCCCCTCTTGGCCCCAACCAACATACGCACAGGAGGCAAACCAACTTTTGATCATTTATTAAAACAAATAAGAGGTTAATCTGTGGGTAAAAAGGCCTTGTTTGTCAGCAGCTCAGGGGATGCCTTCCAGCTGACAGGCGCTAGCGCACTTTGAAGTAGGAAGCATCAAATGGGTTCTGGAGATAAGCAATAGATAAACAACGGGAGTTACCACAAGTGTCAAGCCAGGCATCACCTTCACAGAAATTATTCCTGGAGCGAATGTGGAAGTCATTAATCCCAAGAGAAAAGACAGAGGTGGGCATGGTGGCTCATGCCTGTCATCTCAACACTTTGGGAGGCCAAGGCGGGAGGATCCCTTGAAGCCAAGAGTCCAAGATCAGCCTGGGCAACAAAGTGAGACCTCGTCTCTACAACAACTAAACTAAATAAAATAAATTAGCCAGGTGCAGTGGTGCACACCTGTAGTCCCAGCTACTCAGGAGGCTAAGGCAGGAGGATTGCTTGAGCCCAGGAGGTCAAGGCTGCAGTGACCTATGATCACATCACTGCACTCCTGCCTGGTCCACAGAGCAAGGCCCTGTCTCTAAAAGTAAGAGAAGAGAAGACAGATGAAGCAAAGTGGGCCAAAACGTAGAAAAAGGAAATTGCTCTGTTTTAGATGAAGGATTGTGAAACAAAATTTTCAAAAGCAGCAATGAAAGACCTGTCTACCACAGTGTAGCCCTCAGCAAAACCACAAGTGGGCAGACTCTGACTCTCCCACACCCCTCTGGCTAACCCCAAACCCCTTCTAGATAGAATGTTCTCCTTCCTCTTCATCCTAATGCCAGGAGCAACTTTGGTGGTGCGTTCCCCACACCTGCCCCCTTTGCCAAAGCTCCAGGTTCCAGAACCTTCCTTTCTTTCTTCTCTTCTGCTTTAAGGCTTGCTTACCCTGAGTTCAAGATCCTTACAGCCTTGTTAGATAAATGGCTACATAAGATGACCGGTTAACCAGAGCGAGTATGGCTGATGATGGCTTCTGCAATATAATGAAATGAACCTGCTCCCACCTTCACTGAACGATCAACATTCACTTTGGTGTAATGGGGTAAACCATCAACATGTCCCTCCTGATGCAATGCACAGAGAACATGACACCATTGCTGTGATAGTCCCACCCCAAATGCATAAGAATATCACCGCCAAGAAACATCAGCCAAATCCAAAGTAAGGGACATTCTATCAAATAACCGTCTTGCGTTCTTCAAGAATGCCAATACCATGAAAGATAAAGAAAAACTGAGGATCTGTTCCAGGCTAAAAGGTACCTACAGAGACACAACAACTGAAAATAATGCATGATCTGGGATGATCGTTTGCTCCAATGTACATCATTGGGTTAACTGGCGAAATCTGAATGAGGTCCATTAGAAAACCGTATTGTAGCAGGGTTAGTTTCCTGATTTTGATCATTGCCTTGGTTATATAAGAGAAAGTCCTTGTTATTAAGGAATACACAGGAATATTTAGGGGTAAAGGATAACTCTTCTGCCACTTGGAAAATAATAAAGCAAATGGGGTAAAATGGTAGCACTGGGGAATCTCAGCGAAGGGTATAAAGGATGTCTTTGTACTATTTTTGCAACACTTCCATGTCTGGAAAAATAATAATAAATATTACATATTTAATAATTAAATGAATGAAAAAGTGCAATGTTTCTGCAGGTGTCGACCTTGGCAATGCAATAGGATCATCTCAGAAGCTCTGCATGAACATCAGTGCCCAGGCCCCAACCCAGAGATTCATAGTCAGTTAGCTGGGGGTGAA\tC\t.\tPASS\tSVTYPE=DEL;END=129806745;SVLEN=-43365\tGT:AD:DP:SAC\t0/1:5,4:9:1,4,3,1\n"
  },
  {
    "path": "tests/AnnotSV/test_26_HtzHomCounts_deletionFiltering/README",
    "content": "# extract-HG00096.vcf extract-tutu.vcf sont quasiment les mêmes fichiers :\n# => nom de la colonne \"sample\" qui est différent\n# => 2 variants différetns (au niveau de POS)\n\n# diff extract-HG00096.vcf extract-tutu.vcf\n< #CHROM        POS     ID      REF     ALT     QUAL    FILTER  INFO    FORMAT  HG00096\n> #CHROM        POS     ID      REF     ALT     QUAL    FILTER  INFO    FORMAT  tutu\n< 1     3809347 rs192032080     T       C       100.0   PASS    AC=14;AF=0.00279553  GT:DP   0|1:6\n> 1     3809346 rs192032080     T       C       100.0   PASS    AC=14;AF=0.00279553  GT:DP   0|1:6\n\n \n# Les comptes sont faits sur tous les samples (ici, HG00096 et tutu)\n# Puis on affiche uniquement ceux dans -snvIndelSamples\n\n$ANNOTSV/bin/AnnotSV -SVinputFile \"./input/SV.bed\" -svtBEDcol 4 -outputFile \"./output/SV_tcl.annotated.tsv\" -snvIndelFiles \"./input/extract-*.vcf\" -snvIndelSamples tutu -genomeBuild GRCh37 -includeCI 0 &> \"./output/output.log\"\n\n$cut \"./output/SV_tcl.annotated.tsv\" \"AnnotSV_ID;Annotation_mode;Count_hom(HG00096);Count_htz(HG00096);Count_htz/allHom(HG00096);Count_htz/total(cohort);Count_total(cohort);Count_hom(tutu);Count_htz(tutu);Count_htz/allHom(tutu);kk\"\n\n\n\n"
  },
  {
    "path": "tests/AnnotSV/test_26_HtzHomCounts_deletionFiltering/command_Tcl.sh",
    "content": "#!/bin/bash -x\n\nset -eo pipefail\n\n\ncut=\"$ANNOTSV/tests/AnnotSV/scripts/cutWithColumnNames.tcl\"\n\n\n######################################################################\n# Check of the \"-snvIndelFiles\" option (help for deletion filtering)\n######################################################################\n\n# => Add of the columns \"Count_hom(HG00096);Count_htz(HG00096);Count_htz/allHom(HG00096);Count_htz/total(cohort);Count_total(cohort)\"\n# => Values reported only for deletions\n# => Display of ratios only if Count_total(cohort) > 50\n\n\n\n## ./input/SV.bed\n#################\n# 1       3777548 4234731 DEL\n# 1       3777558 4234720 DUP\n\n# BED => SV location = ]3777548-4234731]\n\n\n## ./input/extract-HG00096.vcf\n##############################\n# cut -f 1,2,4,5,10 extract-HG00096.vcf\n\n# #CHROM  POS     REF     ALT     HG00096\n# 1       3777548 G       A       1|0:8\n# 1       3809347 T       C       0|1:6\n# 1       3812848 C       A,G     1|2:8\n# 1       3817173 TG      T       1|0:2\n# 1       3833398 CCGA    C       0|1:4\n# 1       3833877 C       CA,CAA,CAAAA    1|0:0\n# 1       3833945 A       AT,ATTT 1|1:4\n# 1       4006388 C       A,T     0|1:6\n# 1       4015685 C       A       0|1:2\n# 1       4026068 G       A,T     1|1:4\n# 1       4048855 ATT     AT,A    1|0:8\n# 1       4072209 G       A,T     0|2:6\n# 1       4073064 G       C,T     0|1:4\n# 1       4086587 C       G       0|1:3\n# 1       4121636 G       A,T     1|0:3\n# 1       4122566 T       TTCTCTCC,TTCTCTCT       1|1:4\n# 1       4128523 C       A,G     0|1:5\n# 1       4196626 C       A,G     2|0:7\n# 1       4204560 TCTTA   CCTTA,T 0|1:15\n# 1       4234731 G       C       0|1:5\n\n# => 20 lines <=> 34 SNV/indel (multiallelic) \n\n# -> The first SNV is not located in the DEL: 1:3777548 (exactly the same position than the DEL start) \n# -> 33 SNV/indel located in the DEL and 32 in the DUP: 65 in total\n\n# It is to notice that AnnotSV reports only 1 count if 2 SNV/indel are located at the same position (e.g. 1       3812848 C       A,G     1|2:8)\n# -> DEL : 16 SNV/indel htz + 3 hom\n\n\n\n## AnnotSV analysis :\n#####################\n\n\n# First example:\nmkdir -p ./output\nrm -f \"./output/SV_tcl.annotated.tsv\" \"./output/output.log\"\n$ANNOTSV/bin/AnnotSV -SVinputFile \"./input/SV.bed\" -svtBEDcol 4 -outputFile \"./output/SV_tcl.annotated.tsv\" -snvIndelFiles \"./input/extract-HG00096.vcf\" -genomeBuild GRCh37 -includeCI 0 &> \"./output/output.log\"\n#        ...parsing of ./input/extract-HG00096.vcf (May 30 2025 - 12:33)\n#                -> 37 SNV/indel located in all the SV (potentially with redundancy depending on SV overlap)\n#                -> 37 SNV/indel loaded\n\nif [ `grep -c \" 37 SNV/indel loaded\" \"./output/output.log\"` == 1 ]\nthen\n        echo \"Ok\"\nelse\n        echo \"error 1: SNV/indel not correctly loaded\"\n        exit 1\nfi\n\n\n# $cut \"./output/SV_tcl.annotated.tsv\" \"AnnotSV_ID;Annotation_mode;Count_hom(HG00096);Count_htz(HG00096);Count_htz/allHom(HG00096);Count_htz/total(cohort);Count_total(cohort)\"\n#\n# AnnotSV_ID      Annotation_mode Count_hom(HG00096)      Count_htz(HG00096)      Count_htz/allHom(HG00096)       Count_htz/total(cohort) Count_total(cohort)\n# 1_3777548_4234731_DEL_1 full    3       16      NA      NA      19\n# 1_3777548_4234731_DEL_1 split   0       2       NA      NA      2\n# 1_3777548_4234731_DEL_1 split   0       0       NA      NA      0\n# 1_3777548_4234731_DEL_1 split   0       1       NA      NA      1\n# 1_3777548_4234731_DEL_1 split   0       0       NA      NA      0\n# 1_3777548_4234731_DEL_1 split   0       1       NA      NA      1\n# 1_3777558_4234720_DUP_1 full    NA      NA      NA      NA      NA\n# 1_3777558_4234720_DUP_1 split   NA      NA      NA      NA      NA\n# 1_3777558_4234720_DUP_1 split   NA      NA      NA      NA      NA\n# 1_3777558_4234720_DUP_1 split   NA      NA      NA      NA      NA\n# 1_3777558_4234720_DUP_1 split   NA      NA      NA      NA      NA\n# 1_3777558_4234720_DUP_1 split   NA      NA      NA      NA      NA\n\nif [ `$cut \"./output/SV_tcl.annotated.tsv\" \"AnnotSV_ID;Annotation_mode;Count_hom(HG00096);Count_htz(HG00096);Count_htz/allHom(HG00096);Count_htz/total(cohort);Count_total(cohort)\" | grep DEL | grep full | cut -f 3` == 3 ]\nthen\n        echo \"Ok\"\nelse\n        echo \"error 1: SNV/indel not correctly loaded (Count_hom)\"\n        exit 1\nfi\n\nif [ `$cut \"./output/SV_tcl.annotated.tsv\" \"AnnotSV_ID;Annotation_mode;Count_hom(HG00096);Count_htz(HG00096);Count_htz/allHom(HG00096);Count_htz/total(cohort);Count_total(cohort)\" | grep DEL | grep full | cut -f 4` == 16 ]\nthen\n        echo \"Ok\"\nelse\n        echo \"error 1: SNV/indel not correctly loaded (Count_htz)\"\n        exit 1\nfi\n\n\n\n# Check avec 3 samples (trio)\n#############################\n\nrm -f \"./output/3samples_tcl.annotated.tsv\" \"./output/output.log\"\n$ANNOTSV/bin/AnnotSV -SVinputFile \"./input/3samples.SV.vcf\" -outputFile \"./output/3samples_tcl.annotated.tsv\" -snvIndelFiles \"./input/3samples.extract-HG00096.snvindel.vcf\" -genomeBuild GRCh38 -metrics us -snvIndelSamples \"prob father mother\" &> \"./output/output.log\"\n\n#...parsing of snvIndelFiles for \"father mother prob\" (October 29 2021 - 16:20)\n#        ...split multiallelic sites into multiple rows for 3samples.extract-HG00096.snvindel.vcf (October 29 2021 - 16:20)\n#        ...parsing of 3samples.extract-HG00096.snvindel.vcf (October 29 2021 - 16:20)\n#                -> 19 SNV/indel located in all the SV (potentially with redundancy depending on SV overlap)\n#                -> 19 SNV/indel loaded\n\nif [ `grep -c \" 19 SNV/indel loaded\" \"./output/output.log\"` == 1 ]\nthen\n        echo \"Ok\"\nelse\n        echo \"error 1: SNV/indel not correctly loaded\"\n        exit 1\nfi\n\n\n# $cut \"./output/3samples_tcl.annotated.tsv\" \"AnnotSV_ID;Annotation_mode;Count_hom(father);Count_htz(father);Count_htz/allHom(father);Count_htz/total(cohort)\"\n#\n# AnnotSV_ID      Annotation_mode Count_hom(father)       Count_htz(father)       Count_htz/allHom(father)        Count_htz/total(cohort)\n# 1_3777548_4234731_DEL_1 full    3       16      NA      NA\n# 1_3777548_4234731_DEL_1 split   0       0       NA      NA\n# 1_3777548_4234731_DEL_1 split   1       4       NA      NA\n# 1_3777548_4234731_DEL_1 split   0       0       NA      NA\n# 1_3777548_4234731_DEL_1 split   0       0       NA      NA\n# 1_3777548_4234731_DEL_1 split   0       0       NA      NA\n# 1_3777548_4234731_DEL_1 split   0       0       NA      NA\n# 1_3777548_4234731_DEL_1 split   0       0       NA      NA\n\nif [ `$cut \"./output/3samples_tcl.annotated.tsv\" \"AnnotSV_ID;Annotation_mode;Count_hom(father);Count_htz(father);Count_htz/allHom(father);Count_htz/total(cohort)\" | grep DEL | grep full | cut -f 3` == 3 ]\nthen\n        echo \"Ok\"\nelse\n        echo \"error 1: SNV/indel not correctly loaded (Count_hom)\"\n        exit 1\nfi\n\nif [ `$cut \"./output/3samples_tcl.annotated.tsv\" \"AnnotSV_ID;Annotation_mode;Count_hom(father);Count_htz(father);Count_htz/allHom(father);Count_htz/total(cohort)\" | grep DEL | grep full | cut -f 4` == 16 ]\nthen\n        echo \"Ok\"\nelse\n        echo \"error 1: SNV/indel not correctly loaded (Count_htz)\"\n        exit 1\nfi\n\n\n# $cut \"./output/3samples_tcl.annotated.tsv\" \"AnnotSV_ID;Annotation_mode;Count_hom(mother);Count_htz(mother);Count_htz/allHom(mother);Count_htz/total(cohort)\"\n#\n# AnnotSV_ID      Annotation_mode Count_hom(mother)       Count_htz(mother)       Count_htz/allHom(mother)        Count_htz/total(cohort)\n# 1_3777548_4234731_DEL_1 full    0       19      NA      NA\n# 1_3777548_4234731_DEL_1 split   0       0       NA      NA\n# 1_3777548_4234731_DEL_1 split   0       5       NA      NA\n# 1_3777548_4234731_DEL_1 split   0       0       NA      NA\n# 1_3777548_4234731_DEL_1 split   0       0       NA      NA\n# 1_3777548_4234731_DEL_1 split   0       0       NA      NA\n# 1_3777548_4234731_DEL_1 split   0       0       NA      NA\n# 1_3777548_4234731_DEL_1 split   0       0       NA      NA\n\nif [ `$cut \"./output/3samples_tcl.annotated.tsv\" \"AnnotSV_ID;Annotation_mode;Count_hom(mother);Count_htz(mother);Count_htz/allHom(mother);Count_htz/total(cohort)\" | grep DEL | grep full | cut -f 4` == 19 ]\nthen\n        echo \"Ok\"\nelse\n        echo \"error 1: SNV/indel not correctly loaded (Count_htz)\"\n        exit 1\nfi\n\n\n# $cut \"./output/3samples_tcl.annotated.tsv\" \"AnnotSV_ID;Annotation_mode;Count_hom(prob);Count_htz(prob);Count_htz/allHom(prob);Count_htz/total(cohort)\"\n#\n# AnnotSV_ID      Annotation_mode Count_hom(prob) Count_htz(prob) Count_htz/allHom(prob)  Count_htz/total(cohort)\n# 1_3777548_4234731_DEL_1 full    0       0       NA      NA\n# 1_3777548_4234731_DEL_1 split   0       0       NA      NA\n# 1_3777548_4234731_DEL_1 split   0       0       NA      NA\n# 1_3777548_4234731_DEL_1 split   0       0       NA      NA\n# 1_3777548_4234731_DEL_1 split   0       0       NA      NA\n# 1_3777548_4234731_DEL_1 split   0       0       NA      NA\n# 1_3777548_4234731_DEL_1 split   0       0       NA      NA\n# 1_3777548_4234731_DEL_1 split   0       0       NA      NA\n\n\n\n\necho \"ok - Finished\"\n\n\n\n"
  },
  {
    "path": "tests/AnnotSV/test_26_HtzHomCounts_deletionFiltering/input/3samples.SV.vcf",
    "content": "##fileformat=VCFv4.2\n#CHROM\tPOS\tID\tREF\tALT\tQUAL\tFILTER\tINFO\tFORMAT\tfather\tmother\tprob\nchr1\t3777548\t.\tC\t<DEL>\t.\tPASS\tSVTYPE=DEL;END=4234731\tGT:RR:RV\t0/0:0:0\t0/1:0:0\t0/1:0:0\n"
  },
  {
    "path": "tests/AnnotSV/test_26_HtzHomCounts_deletionFiltering/input/3samples.extract-HG00096.snvindel.vcf",
    "content": "##fileformat=VCFv4.1\n#CHROM\tPOS\tID\tREF\tALT\tQUAL\tFILTER\tINFO\tFORMAT\tfather\tmother\tprob\n1\t3809347\trs192032080\tT\tC\t100.0\tPASS\tAC=14;AF=0.00279553;AN=5008;NS=2504;DP=19072;ASN_AF=0;AMR_AF=0.0043;SAS_AF=0.0010;EUR_AF=0.0089;EAS_AF=\tGT:DP\t0|1:6\t1|0:8\t1|0:8\n1\t3812848\trs10797353\tC\tA,G\t100.0\tPASS\tAC=57,3330;AF=0.0113818,0.664936;AN=5008;NS=2504;DP=19321;ASN_AF=0,0;AMR_AF=0.0000,0.6268;AFR_A=5\tGT:DP\t1|2:8\t1|0:8\t0|0:8\n1\t3817173\t........\tTG\tT\t100.0\tPASS\tAC=10;AF=0.00199681;AN=5008;NS=2504;DP=14835;ASN_AF=0;AMR_AF=0.0000;SAS_AF=0.0020;EUR_AF=0.00700\tGT:DP\t1|0:2\t1|0:8\t0|0:8\n1\t3833398\t........\tCCGA\tC\t100.0\tPASS\tAC=11;AF=0.00219649;AN=5008;NS=2504;DP=19903;ASN_AF=0;AMR_AF=0.0043;SAS_AF=;EUR_AF=0.0070;EAS_AF=SAN_A\tGT:DP\t0|1:4\t1|0:8\t0|0:8\n1\t3833877\trs145187421\tC\tA,TA,CA\t100.0\tPASS\tAC=1236,37,20;AF=0.246805,0.00738818,0.00399361;AN=5008;NS=2504;DP=5844;ASN_AF=0,0,0;AMR_AF=00.333\tGT:DP\t1|0:0\t1|0:8\t0|0:8\n1\t3833945\trs142701658\tA\tAT,ATTT\t100.0\tPASS\tAC=1592,9;AF=0.317891,0.00179712;AN=5008;NS=2504;DP=10572;ASN_AF=0,0;AMR_AF=0.2752,0.0014;SAS_AF=0.2812\tGT:DP\t1|1:4\t1|0:8\t0|0:8\n1\t4006388\trs12562706\tC\tA,T\t100.0\tPASS\tAC=547,172;AF=0.109225,0.034345;AN=5008;NS=2504;DP=19839;ASN_AF=0,0;AMR_AF=0.0865,0.0115;SAS_AF=0.1135\tGT:DP\t0|1:6\t1|0:8\t0|0:8\n1\t4015685\trs182496271\tC\tA\t100.0\tPASS\tAC=14;AF=0.00279553;AN=5008;NS=2504;DP=14943;ASN_AF=0;AMR_AF=0.0000;SAS_AF=0.0041;EUR_AF=0.0099;SAS=0\tGT:DP\t0|1:2\t1|0:8\t0|0:8\n1\t4026068\trs12031275\tG\tA,T\t100.0\tPASS\tAC=2263,2;AF=0.451877,0.000399361;AN=5008;NS=2504;DP=21227;ASN_AF=0,0;AMR_AF=0.6081,0.0014;SAS=0.4591\tGT:DP\t1|1:4\t1|0:8\t0|0:8\n1\t4048855\trs201570649\tATT\tAT,A\t100.0\tPASS\tAC=2530,598;AF=0.505192,0.119409;AN=5008;NS=2504;DP=19384;ASN_AF=0,0;AMR_AF=0.5173,0.0922;S=0.46,0.60\tGT:DP\t1|0:8\t1|0:8\t0|0:8\n1\t4072209\trs55798869\tG\tA,T\t100.0\tPASS\tAC=9,1080;AF=0.00179712,0.215655;AN=5008;NS=2504;DP=16572;ASN_AF=0,0;AMR_AF=0.0043,0.1859;SASF=0.3149\tGT:DP\t0|2:6\t1|0:8\t0|0:8\n1\t4073064\trs12023372\tG\tC,T\t100.0\tPASS\tAC=1102,49;AF=0.220048,0.00978435;AN=5008;NS=2504;DP=16050;ASN_AF=0,0;AMR_AF=0.1859,0.0086;S_AF=0.3160\tGT:DP\t0|1:4\t1|0:8\t0|0:8\n1\t4086587\trs190042198\tC\tG\t100.0\tPASS\tAC=15;AF=0.00299521;AN=5008;NS=2504;DP=13007;ASN_AF=0;AMR_AF=0.0014;SAS_AF=0.0041;EUR_AF=0.0089;F=0\tGT:DP\t0|1:3\t1|0:8\t0|0:8\n1\t4121636\trs7556380\tG\tA,T\t100.0\tPASS\tAC=1540,8;AF=0.307508,0.00159744;AN=5008;NS=2504;DP=15627;ASN_AF=0,0;AMR_AF=0.4323,0.0000;F=0.000\tGT:DP\t1|0:3\t1|0:8\t0|0:8\n1\t4122566\t........\tT\tTTC,TCT\t100.0\tPASS\tAC=3857,416;AF=0.770168,0.0830671;AN=5008;NS=2504;DP=19077;ASN_AF=0,0;SAN_AF=0,0;F=0.000000000000\tGT:DP\t1|1:4\t1|0:8\t0|0:8\n1\t4128523\trs10753358\tC\tA,G\t100.0\tPASS\tAC=2541,25;AF=0.507388,0.00499201;AN=5008;NS=2504;DP=22170;ASN_AF=0,0;AMR_AF=0.4870,0.0014;F=0.33\tGT:DP\t0|1:5\t1|0:8\t0|0:8\n1\t4196626\t........\tC\tA,G\t100.0\tPASS\tAC=53,2359;AF=0.0105831,0.471046;AN=5008;NS=2504;DP=33401;ASN_AF=0,0;AMR_AF=0.0115,0.4582;SAS_AF=0.477\tGT:DP\t2|0:7\t1|0:8\t0|0:8\n1\t4204560\t........\tTCTTA\tCCTTA,T\t100.0\tPASS\tAC=2927,4;AF=0.584465,0.000798722;AN=5008;NS=2504;DP=107026;ASN_AF=0,0;AMR_AF=0.5965,0.0000;SAN_AF=0\tGT:DP\t0|1:15\t1|0:8\t0|0:8\n1\t4234731\t.........\tG\tC\t100.0\tPASS\tAC=1;AF=0.000199681;AN=5008;NS=2504;DP=16437;ASN_AF=0;AMR_AF=0.0000;SAS_AF=;EUR_AF=0.001000025222525\tGT:DP\t0|1:5\t1|0:8\t0|0:8\n"
  },
  {
    "path": "tests/AnnotSV/test_26_HtzHomCounts_deletionFiltering/input/SV.bed",
    "content": "1\t3777548\t4234731\tDEL\n1\t3777558\t4234720\tDUP\n"
  },
  {
    "path": "tests/AnnotSV/test_26_HtzHomCounts_deletionFiltering/input/extract-HG00096.vcf",
    "content": "##fileformat=VCFv4.1\n#CHROM\tPOS\tID\tREF\tALT\tQUAL\tFILTER\tINFO\tFORMAT\tHG00096\n1\t3777548\trs61768955\tG\tA\t100.0\tPASS\tAC=15;AF=0.00299521;AN=5008;NS=2504;DP=16236;ASN_AF=0;AMR_AF=0.0014;SAS_AF=0.0010;EUR_AF=0.0089;EAS_AF=;AFR_AF=0.0030;SAN_AF=0\tGT:DP\t1|0:8\n1\t3809347\trs192032080\tT\tC\t100.0\tPASS\tAC=14;AF=0.00279553;AN=5008;NS=2504;DP=19072;ASN_AF=0;AMR_AF=0.0043;SAS_AF=0.0010;EUR_AF=0.0089;EAS_AF=;AFR_AF=0.0008;SAN_AF=0\tGT:DP\t0|1:6\n1\t3812848\trs10797353\tC\tA,G\t100.0\tPASS\tAC=57,3330;AF=0.0113818,0.664936;AN=5008;NS=2504;DP=19321;ASN_AF=0,0;AMR_AF=0.0000,0.6268;SAS_AF=0.6155;EUR_AF=0.0070,0.7127;EAS_AF=0.0496,0.5595;AFR_AF=0.0000,0.7655;SAN_AF=0,0\tGT:DP\t1|2:8\n1\t3817173\t.\tTG\tT\t100.0\tPASS\tAC=10;AF=0.00199681;AN=5008;NS=2504;DP=14835;ASN_AF=0;AMR_AF=0.0000;SAS_AF=0.0020;EUR_AF=0.0070;EAS_AF=;AFR_AF=0.0008;SAN_AF=0\tGT:DP\t1|0:2\n1\t3833398\t.\tCCGA\tC\t100.0\tPASS\tAC=11;AF=0.00219649;AN=5008;NS=2504;DP=19903;ASN_AF=0;AMR_AF=0.0043;SAS_AF=;EUR_AF=0.0070;EAS_AF=;AFR_AF=0.0008;SAN_AF=0\tGT:DP\t0|1:4\n1\t3833877\trs145187421\tC\tCA,CAA,CAAAA\t100.0\tPASS\tAC=1236,37,20;AF=0.246805,0.00738818,0.00399361;AN=5008;NS=2504;DP=5844;ASN_AF=0,0,0;AMR_AF=0.1326,0.0058,0.0014;SAS_AF=0.2065,0.0072;EUR_AF=0.1312,0.0119,0.0000;EAS_AF=0.2361,0.0079;AFR_AF=0.4327,0.0045,0.0144;SAN_AF=0,0,0\tGT:DP\t1|0:0\n1\t3833945\trs142701658\tA\tAT,ATTT\t100.0\tPASS\tAC=1592,9;AF=0.317891,0.00179712;AN=5008;NS=2504;DP=10572;ASN_AF=0,0;AMR_AF=0.2752,0.0014;SAS_AF=0.2812;EUR_AF=0.3946,0.0010;EAS_AF=0.2292;AFR_AF=0.3767,0.0053;SAN_AF=0,0\tGT:DP\t1|1:4\n1\t4006388\trs12562706\tC\tA,T\t100.0\tPASS\tAC=547,172;AF=0.109225,0.034345;AN=5008;NS=2504;DP=19839;ASN_AF=0,0;AMR_AF=0.0865,0.0115;SAS_AF=0.1135;EUR_AF=0.1471,0.0010;EAS_AF=0.0665,0.0010;AFR_AF=0.1218,0.1225;SAN_AF=0,0\tGT:DP\t0|1:6\n1\t4015685\trs182496271\tC\tA\t100.0\tPASS\tAC=14;AF=0.00279553;AN=5008;NS=2504;DP=14943;ASN_AF=0;AMR_AF=0.0000;SAS_AF=0.0041;EUR_AF=0.0099;EAS_AF=;AFR_AF=0.0000;SAN_AF=0\tGT:DP\t0|1:2\n1\t4026068\trs12031275\tG\tA,T\t100.0\tPASS\tAC=2263,2;AF=0.451877,0.000399361;AN=5008;NS=2504;DP=21227;ASN_AF=0,0;AMR_AF=0.6081,0.0014;SAS_AF=0.4591;EUR_AF=0.6531,0.0000;EAS_AF=0.5933;AFR_AF=0.1036,0.0008;SAN_AF=0,0\tGT:DP\t1|1:4\n1\t4048855\trs201570649\tATT\tAT,A\t100.0\tPASS\tAC=2530,598;AF=0.505192,0.119409;AN=5008;NS=2504;DP=19384;ASN_AF=0,0;AMR_AF=0.5173,0.0922;SAS_AF=0.4366,0.1360;EUR_AF=0.5239,0.0268;EAS_AF=0.5020,0.2212;AFR_AF=0.5378,0.1142;SAN_AF=0,0\tGT:DP\t1|0:8\n1\t4072209\trs55798869\tG\tA,T\t100.0\tPASS\tAC=9,1080;AF=0.00179712,0.215655;AN=5008;NS=2504;DP=16572;ASN_AF=0,0;AMR_AF=0.0043,0.1859;SAS_AF=0.3149;EUR_AF=0.0000,0.3221;EAS_AF=0.0050,0.1806;AFR_AF=0.0008,0.1036;SAN_AF=0,0\tGT:DP\t0|2:6\n1\t4073064\trs12023372\tG\tC,T\t100.0\tPASS\tAC=1102,49;AF=0.220048,0.00978435;AN=5008;NS=2504;DP=16050;ASN_AF=0,0;AMR_AF=0.1859,0.0086;SAS_AF=0.3160;EUR_AF=0.3221,0.0000;EAS_AF=0.1815;AFR_AF=0.1188,0.0325;SAN_AF=0,0\tGT:DP\t0|1:4\n1\t4086587\trs190042198\tC\tG\t100.0\tPASS\tAC=15;AF=0.00299521;AN=5008;NS=2504;DP=13007;ASN_AF=0;AMR_AF=0.0014;SAS_AF=0.0041;EUR_AF=0.0089;EAS_AF=;AFR_AF=0.0008;SAN_AF=0\tGT:DP\t0|1:3\n1\t4121636\trs7556380\tG\tA,T\t100.0\tPASS\tAC=1540,8;AF=0.307508,0.00159744;AN=5008;NS=2504;DP=15627;ASN_AF=0,0;AMR_AF=0.4323,0.0000;SAS_AF=0.3067;EUR_AF=0.2773,0.0000;EAS_AF=0.3929;AFR_AF=0.2005,0.0061;SAN_AF=0,0\tGT:DP\t1|0:3\n1\t4122566\t.\tT\tTTCTCTCC,TTCTCTCT\t100.0\tPASS\tAC=3857,416;AF=0.770168,0.0830671;AN=5008;NS=2504;DP=19077;ASN_AF=0,0;AMR_AF=0.8790,0.0504;SAS_AF=0.7413,0.0685;EUR_AF=0.8161,0.0388;EAS_AF=0.8562,0.0496;AFR_AF=0.6339,0.1702;SAN_AF=0,0\tGT:DP\t1|1:4\n1\t4128523\trs10753358\tC\tA,G\t100.0\tPASS\tAC=2541,25;AF=0.507388,0.00499201;AN=5008;NS=2504;DP=22170;ASN_AF=0,0;AMR_AF=0.4870,0.0014;SAS_AF=0.5010;EUR_AF=0.5865,0.0000;EAS_AF=0.3819;AFR_AF=0.5582,0.0182;SAN_AF=0,0\tGT:DP\t0|1:5\n1\t4196626\t.\tC\tA,G\t100.0\tPASS\tAC=53,2359;AF=0.0105831,0.471046;AN=5008;NS=2504;DP=33401;ASN_AF=0,0;AMR_AF=0.0115,0.4582;SAS_AF=0.4775;EUR_AF=0.0229,0.4632;EAS_AF=0.0149,0.4792;AFR_AF=0.0053,0.4728;SAN_AF=0,0\tGT:DP\t2|0:7\n1\t4204560\t.\tTCTTA\tCCTTA,T\t100.0\tPASS\tAC=2927,4;AF=0.584465,0.000798722;AN=5008;NS=2504;DP=107026;ASN_AF=0,0;AMR_AF=0.5965,0.0000;SAS_AF=0.6207,0.0041;EUR_AF=0.5258,0.0000;EAS_AF=0.6151;AFR_AF=0.5726,0.0000;SAN_AF=0,0\tGT:DP\t0|1:15\n1\t4234731\t.\tG\tC\t100.0\tPASS\tAC=1;AF=0.000199681;AN=5008;NS=2504;DP=16437;ASN_AF=0;AMR_AF=0.0000;SAS_AF=;EUR_AF=0.0010;EAS_AF=;AFR_AF=0.0000;SAN_AF=0\tGT:DP\t0|1:5\n"
  },
  {
    "path": "tests/AnnotSV/test_26_HtzHomCounts_deletionFiltering/input/extract-tutu.vcf",
    "content": "##fileformat=VCFv4.1\n#CHROM\tPOS\tID\tREF\tALT\tQUAL\tFILTER\tINFO\tFORMAT\ttutu\n1\t3777548\trs61768955\tG\tA\t100.0\tPASS\tAC=15;AF=0.00299521;AN=5008;NS=2504;DP=16236;ASN_AF=0;AMR_AF=0.0014;SAS_AF=0.0010;EUR_AF=0.0089;EAS_AF=;AFR_AF=0.0030;SAN_AF=0\tGT:DP\t1|0:8\n1\t3809346\trs192032080\tT\tC\t100.0\tPASS\tAC=14;AF=0.00279553;AN=5008;NS=2504;DP=19072;ASN_AF=0;AMR_AF=0.0043;SAS_AF=0.0010;EUR_AF=0.0089;EAS_AF=;AFR_AF=0.0008;SAN_AF=0\tGT:DP\t0|1:6\n1\t3812848\trs10797353\tC\tA,G\t100.0\tPASS\tAC=57,3330;AF=0.0113818,0.664936;AN=5008;NS=2504;DP=19321;ASN_AF=0,0;AMR_AF=0.0000,0.6268;SAS_AF=0.6155;EUR_AF=0.0070,0.7127;EAS_AF=0.0496,0.5595;AFR_AF=0.0000,0.7655;SAN_AF=0,0\tGT:DP\t1|2:8\n1\t3817173\t.\tTG\tT\t100.0\tPASS\tAC=10;AF=0.00199681;AN=5008;NS=2504;DP=14835;ASN_AF=0;AMR_AF=0.0000;SAS_AF=0.0020;EUR_AF=0.0070;EAS_AF=;AFR_AF=0.0008;SAN_AF=0\tGT:DP\t1|0:2\n1\t3833398\t.\tCCGA\tC\t100.0\tPASS\tAC=11;AF=0.00219649;AN=5008;NS=2504;DP=19903;ASN_AF=0;AMR_AF=0.0043;SAS_AF=;EUR_AF=0.0070;EAS_AF=;AFR_AF=0.0008;SAN_AF=0\tGT:DP\t0|1:4\n1\t3833877\trs145187421\tC\tCA,CAA,CAAAA\t100.0\tPASS\tAC=1236,37,20;AF=0.246805,0.00738818,0.00399361;AN=5008;NS=2504;DP=5844;ASN_AF=0,0,0;AMR_AF=0.1326,0.0058,0.0014;SAS_AF=0.2065,0.0072;EUR_AF=0.1312,0.0119,0.0000;EAS_AF=0.2361,0.0079;AFR_AF=0.4327,0.0045,0.0144;SAN_AF=0,0,0\tGT:DP\t1|0:0\n1\t3833945\trs142701658\tA\tAT,ATTT\t100.0\tPASS\tAC=1592,9;AF=0.317891,0.00179712;AN=5008;NS=2504;DP=10572;ASN_AF=0,0;AMR_AF=0.2752,0.0014;SAS_AF=0.2812;EUR_AF=0.3946,0.0010;EAS_AF=0.2292;AFR_AF=0.3767,0.0053;SAN_AF=0,0\tGT:DP\t1|1:4\n1\t4006388\trs12562706\tC\tA,T\t100.0\tPASS\tAC=547,172;AF=0.109225,0.034345;AN=5008;NS=2504;DP=19839;ASN_AF=0,0;AMR_AF=0.0865,0.0115;SAS_AF=0.1135;EUR_AF=0.1471,0.0010;EAS_AF=0.0665,0.0010;AFR_AF=0.1218,0.1225;SAN_AF=0,0\tGT:DP\t0|1:6\n1\t4015685\trs182496271\tC\tA\t100.0\tPASS\tAC=14;AF=0.00279553;AN=5008;NS=2504;DP=14943;ASN_AF=0;AMR_AF=0.0000;SAS_AF=0.0041;EUR_AF=0.0099;EAS_AF=;AFR_AF=0.0000;SAN_AF=0\tGT:DP\t0|1:2\n1\t4026068\trs12031275\tG\tA,T\t100.0\tPASS\tAC=2263,2;AF=0.451877,0.000399361;AN=5008;NS=2504;DP=21227;ASN_AF=0,0;AMR_AF=0.6081,0.0014;SAS_AF=0.4591;EUR_AF=0.6531,0.0000;EAS_AF=0.5933;AFR_AF=0.1036,0.0008;SAN_AF=0,0\tGT:DP\t1|1:4\n1\t4048855\trs201570649\tATT\tAT,A\t100.0\tPASS\tAC=2530,598;AF=0.505192,0.119409;AN=5008;NS=2504;DP=19384;ASN_AF=0,0;AMR_AF=0.5173,0.0922;SAS_AF=0.4366,0.1360;EUR_AF=0.5239,0.0268;EAS_AF=0.5020,0.2212;AFR_AF=0.5378,0.1142;SAN_AF=0,0\tGT:DP\t1|0:8\n1\t4072209\trs55798869\tG\tA,T\t100.0\tPASS\tAC=9,1080;AF=0.00179712,0.215655;AN=5008;NS=2504;DP=16572;ASN_AF=0,0;AMR_AF=0.0043,0.1859;SAS_AF=0.3149;EUR_AF=0.0000,0.3221;EAS_AF=0.0050,0.1806;AFR_AF=0.0008,0.1036;SAN_AF=0,0\tGT:DP\t0|2:6\n1\t4073064\trs12023372\tG\tC,T\t100.0\tPASS\tAC=1102,49;AF=0.220048,0.00978435;AN=5008;NS=2504;DP=16050;ASN_AF=0,0;AMR_AF=0.1859,0.0086;SAS_AF=0.3160;EUR_AF=0.3221,0.0000;EAS_AF=0.1815;AFR_AF=0.1188,0.0325;SAN_AF=0,0\tGT:DP\t0|1:4\n1\t4086587\trs190042198\tC\tG\t100.0\tPASS\tAC=15;AF=0.00299521;AN=5008;NS=2504;DP=13007;ASN_AF=0;AMR_AF=0.0014;SAS_AF=0.0041;EUR_AF=0.0089;EAS_AF=;AFR_AF=0.0008;SAN_AF=0\tGT:DP\t0|1:3\n1\t4121636\trs7556380\tG\tA,T\t100.0\tPASS\tAC=1540,8;AF=0.307508,0.00159744;AN=5008;NS=2504;DP=15627;ASN_AF=0,0;AMR_AF=0.4323,0.0000;SAS_AF=0.3067;EUR_AF=0.2773,0.0000;EAS_AF=0.3929;AFR_AF=0.2005,0.0061;SAN_AF=0,0\tGT:DP\t1|0:3\n1\t4122566\t.\tT\tTTCTCTCC,TTCTCTCT\t100.0\tPASS\tAC=3857,416;AF=0.770168,0.0830671;AN=5008;NS=2504;DP=19077;ASN_AF=0,0;AMR_AF=0.8790,0.0504;SAS_AF=0.7413,0.0685;EUR_AF=0.8161,0.0388;EAS_AF=0.8562,0.0496;AFR_AF=0.6339,0.1702;SAN_AF=0,0\tGT:DP\t1|1:4\n1\t4128523\trs10753358\tC\tA,G\t100.0\tPASS\tAC=2541,25;AF=0.507388,0.00499201;AN=5008;NS=2504;DP=22170;ASN_AF=0,0;AMR_AF=0.4870,0.0014;SAS_AF=0.5010;EUR_AF=0.5865,0.0000;EAS_AF=0.3819;AFR_AF=0.5582,0.0182;SAN_AF=0,0\tGT:DP\t0|1:5\n1\t4196626\t.\tC\tA,G\t100.0\tPASS\tAC=53,2359;AF=0.0105831,0.471046;AN=5008;NS=2504;DP=33401;ASN_AF=0,0;AMR_AF=0.0115,0.4582;SAS_AF=0.4775;EUR_AF=0.0229,0.4632;EAS_AF=0.0149,0.4792;AFR_AF=0.0053,0.4728;SAN_AF=0,0\tGT:DP\t2|0:7\n1\t4204560\t.\tTCTTA\tCCTTA,T\t100.0\tPASS\tAC=2927,4;AF=0.584465,0.000798722;AN=5008;NS=2504;DP=107026;ASN_AF=0,0;AMR_AF=0.5965,0.0000;SAS_AF=0.6207,0.0041;EUR_AF=0.5258,0.0000;EAS_AF=0.6151;AFR_AF=0.5726,0.0000;SAN_AF=0,0\tGT:DP\t0|1:15\n1\t4234731\t.\tG\tC\t100.0\tPASS\tAC=1;AF=0.000199681;AN=5008;NS=2504;DP=16437;ASN_AF=0;AMR_AF=0.0000;SAS_AF=;EUR_AF=0.0010;EAS_AF=;AFR_AF=0.0000;SAN_AF=0\tGT:DP\t0|1:5\n"
  },
  {
    "path": "tests/AnnotSV/test_27_Samples_ID/command_Tcl.sh",
    "content": "#!/bin/bash -x\n\nset -eo pipefail\n\n\ncut=\"$ANNOTSV/tests/AnnotSV/scripts/cutWithColumnNames.tcl\"\n\nfunction exists_in_list() {\n    LIST=$1\n    DELIMITER=$2\n    VALUE=$3\n    [[ \"$LIST\" =~ ($DELIMITER|^)$VALUE($DELIMITER|$) ]]\n}\n\n\n## Checking the creation of the \"Samples_ID\" column in the AnnotSV output\n## -------------------------------------------------------------------------\n## -> automatic creation with a VCF as input\n## -> via the \"-samplesidBEDcol\" option with a BED as input, else exists with \"NA\" values\n\n## We check:\n## - that the \"Samples_ID\" column exists, and that the values are correct\n## - that there is no \"shift\" with the other columns\n\n## Different options are to be tested (because they are involved in the creation of this feature):\n## -SVinputInfo\n## -svtBEDcol\n## -samplesidBEDcol\n\n## We also need to check a BED with or without header\n\n\n\n# SV input BED file with header\n###############################\nmkdir -p ./output\nrm -f \"./output/test_tcl.annotated.tsv\"\n$ANNOTSV/bin/AnnotSV -SVinputFile \"./input/test.bed\" -SVinputInfo 1 -outputFile \"./output/test_tcl.annotated.tsv\" -svtbedcol 4 -samplesidBEDcol 5 -genomeBuild GRCh37\n# Samples_ID      ACMG_class\n# sample1 \t  3\n# sample1,sampl2  1\nfor v in `$cut \"./output/test_tcl.annotated.tsv\" \"ACMG_class\"`\ndo\n        if ! exists_in_list \"1 3 ACMG_class\" \" \" \"$v\"\n        then\n                echo \"Error with ./input/test.bed (test 1A)\"\n                echo \"error 1\"\n                exit 1\n        fi\ndone\nfor v in `$cut \"./output/test_tcl.annotated.tsv\" \"Samples_ID\"`\ndo\n        if ! exists_in_list \"Samples_ID sample1 sample1,sampl2\" \" \" \"$v\"\n        then\n                echo \"Error with ./input/test.bed (test 1B)\"\n                echo \"error 1\"\n                exit 1\n        fi\ndone\n\n\nrm -f \"./output/test_tcl.annotated.tsv\"\n$ANNOTSV/bin/AnnotSV -SVinputFile \"./input/test.bed\" -SVinputInfo 1 -outputFile \"./output/test_tcl.annotated.tsv\" -genomeBuild GRCh37\n# => No SV ranking\n# => No Samples_ID\n# Samples_ID  ACMG_class\n# NA          NA\n# NA          NA\nfor v in `$cut \"./output/test_tcl.annotated.tsv\" \"ACMG_class\"`\ndo\n        if ! exists_in_list \"ACMG_class NA\" \" \" \"$v\"\n        then\n                echo \"Error with ./input/test.bed (test 2A)\"\n                echo \"error 1\"\n                exit 1\n        fi\ndone\nfor v in `$cut \"./output/test_tcl.annotated.tsv\" \"Samples_ID\"`\ndo\n        if ! exists_in_list \"Samples_ID NA\" \" \" \"$v\"\n        then\n                echo \"Error with ./input/test.bed (test 2B)\"\n                echo \"error 1\"\n                exit 1\n        fi\ndone\n\n\n\n\nrm -f \"./output/test_tcl.annotated.tsv\"\n$ANNOTSV/bin/AnnotSV -SVinputFile \"./input/test.bed\" -SVinputInfo 1 -outputFile \"./output/test_tcl.annotated.tsv\" -svtbedcol 4 -genomeBuild GRCh37\n# => No Samples_ID\n# Samples_ID ACMG_class\n# NA         3\n# NA         1\nfor v in `$cut \"./output/test_tcl.annotated.tsv\" \"ACMG_class\"`\ndo\n        if ! exists_in_list \"ACMG_class 3 1\" \" \" \"$v\"\n        then\n                echo \"Error with ./input/test.bed (test 3A)\"\n                echo \"error 1\"\n                exit 1\n        fi\ndone\nfor v in `$cut \"./output/test_tcl.annotated.tsv\" \"Samples_ID\"`\ndo\n        if ! exists_in_list \"Samples_ID NA\" \" \" \"$v\"\n        then\n                echo \"Error with ./input/test.bed (test 3B)\"\n                echo \"error 1\"\n                exit 1\n        fi\ndone\n\n\nrm -f \"./output/test_tcl.annotated.tsv\"\n$ANNOTSV/bin/AnnotSV -SVinputFile \"./input/test.bed\" -SVinputInfo 1 -outputFile \"./output/test_tcl.annotated.tsv\" -samplesidBEDcol 5 -genomeBuild GRCh37\n# => No SV ranking\n# Samples_ID      ACMG_class\n# sample1,sampl2  NA\n# sample1 NA\nfor v in `$cut \"./output/test_tcl.annotated.tsv\" \"ACMG_class\"`\ndo\n        if ! exists_in_list \"ACMG_class NA\" \" \" \"$v\"\n        then\n                echo \"Error with ./input/test.bed (test 4A)\"\n                echo \"error 1\"\n                exit 1\n        fi\ndone\nfor v in `$cut \"./output/test_tcl.annotated.tsv\" \"Samples_ID\"`\ndo\n        if ! exists_in_list \"Samples_ID sample1,sampl2 sample1\" \" \" \"$v\"\n        then\n                echo \"Error with ./input/test.bed (test 4B)\"\n                echo \"error 1\"\n                exit 1\n        fi\ndone\n\n\n\nrm -f \"./output/test_tcl.annotated.tsv\"\n$ANNOTSV/bin/AnnotSV -SVinputFile \"./input/test.bed\" -SVinputInfo 0 -outputFile \"./output/test_tcl.annotated.tsv\" -svtbedcol 4 -samplesidBEDcol 5 -genomeBuild GRCh37\n# Samples_ID      ACMG_class\n# sample1 \t  3\n# sample1,sampl2  1\nfor v in `$cut \"./output/test_tcl.annotated.tsv\" \"ACMG_class\"`\ndo\n        if ! exists_in_list \"ACMG_class 3 1\" \" \" \"$v\"\n        then\n                echo \"Error with ./input/test.bed (test 5A)\"\n                echo \"error 1\"\n                exit 1\n        fi\ndone\nfor v in `$cut \"./output/test_tcl.annotated.tsv\" \"Samples_ID\"`\ndo\n        if ! exists_in_list \"Samples_ID sample1,sampl2 sample1\" \" \" \"$v\"\n        then\n                echo \"Error with ./input/test.bed (test 5B)\"\n                echo \"error 1\"\n                exit 1\n        fi\ndone\n\n\n\nrm -f \"./output/test_tcl.annotated.tsv\"\n$ANNOTSV/bin/AnnotSV -SVinputFile \"./input/test.bed\" -SVinputInfo 0 -outputFile \"./output/test_tcl.annotated.tsv\" -genomeBuild GRCh37\n# => No SV ranking\n# => No Samples_ID\n# Samples_ID  ACMG_class\n# NA          NA\n# NA          NA\nfor v in `$cut \"./output/test_tcl.annotated.tsv\" \"ACMG_class\"`\ndo\n        if ! exists_in_list \"ACMG_class NA\" \" \" \"$v\"\n        then\n                echo \"Error with ./input/test.bed (test 6A)\"\n                echo \"error 1\"\n                exit 1\n        fi\ndone\nfor v in `$cut \"./output/test_tcl.annotated.tsv\" \"Samples_ID\"`\ndo\n        if ! exists_in_list \"Samples_ID NA\" \" \" \"$v\"\n        then\n                echo \"Error with ./input/test.bed (test 6B)\"\n                echo \"error 1\"\n                exit 1\n        fi\ndone\n\n\n\nrm -f \"./output/test_tcl.annotated.tsv\"\n$ANNOTSV/bin/AnnotSV -SVinputFile \"./input/test.bed\" -SVinputInfo 0 -outputFile \"./output/test_tcl.annotated.tsv\" -svtbedcol 4 -genomeBuild GRCh37\n# => No Samples_ID\n# Samples_ID    ACMG_class\n# NA      \t3\n# NA      \t1\nfor v in `$cut \"./output/test_tcl.annotated.tsv\" \"ACMG_class\"`\ndo\n        if ! exists_in_list \"ACMG_class 3 1\" \" \" \"$v\"\n        then\n                echo \"Error with ./input/test.bed (test 7A)\"\n                echo \"error 1\"\n                exit 1\n        fi\ndone\nfor v in `$cut \"./output/test_tcl.annotated.tsv\" \"Samples_ID\"`\ndo\n        if ! exists_in_list \"Samples_ID NA\" \" \" \"$v\"\n        then\n                echo \"Error with ./input/test.bed (test 7B)\"\n                echo \"error 1\"\n                exit 1\n        fi\ndone\n\n\nrm -f \"./output/test_tcl.annotated.tsv\"\n$ANNOTSV/bin/AnnotSV -SVinputFile \"./input/test.bed\" -SVinputInfo 0 -outputFile \"./output/test_tcl.annotated.tsv\" -samplesidBEDcol 5 -genomeBuild GRCh37\n# => No SV ranking\n$cut \"./output/test_tcl.annotated.tsv\" \"Samples_ID;ACMG_class\"\n# Samples_ID      ACMG_class\n# sample1,sampl2  NA\n# sample1         NA\nfor v in `$cut \"./output/test_tcl.annotated.tsv\" \"ACMG_class\"`\ndo\n        if ! exists_in_list \"ACMG_class NA\" \" \" \"$v\"\n        then\n                echo \"Error with ./input/test.bed (test 8A)\"\n                echo \"error 1\"\n                exit 1\n        fi\ndone\nfor v in `$cut \"./output/test_tcl.annotated.tsv\" \"Samples_ID\"`\ndo\n        if ! exists_in_list \"Samples_ID sample1,sampl2 sample1\" \" \" \"$v\"\n        then\n                echo \"Error with ./input/test.bed (test 8B)\"\n                echo \"error 1\"\n                exit 1\n        fi\ndone\n\n\n\n\n# SV input BED file without header\n##################################\n\nrm -f \"./output/test_tcl.annotated.tsv\"\n$ANNOTSV/bin/AnnotSV -SVinputFile \"./input/test-withoutHeader.bed\" -SVinputInfo 1 -outputFile \"./output/test_tcl.annotated.tsv\" -svtbedcol 4 -samplesidBEDcol 5 -genomeBuild GRCh37\n$cut \"./output/test_tcl.annotated.tsv\" \"Samples_ID;ACMG_class\"\n# Samples_ID      ACMG_class\n# sample1         3\n# sample1,sampl2  1\nfor v in `$cut \"./output/test_tcl.annotated.tsv\" \"ACMG_class\"`\ndo\n        if ! exists_in_list \"ACMG_class 3 1\" \" \" \"$v\"\n        then\n                echo \"Error with ./input/test.bed (test 9A)\"\n                echo \"error 1\"\n                exit 1\n        fi\ndone\nfor v in `$cut \"./output/test_tcl.annotated.tsv\" \"Samples_ID\"`\ndo\n        if ! exists_in_list \"Samples_ID sample1,sampl2 sample1\" \" \" \"$v\"\n        then\n                echo \"Error with ./input/test.bed (test 9B)\"\n                echo \"error 1\"\n                exit 1\n        fi\ndone\n\n\nrm -f \"./output/test_tcl.annotated.tsv\"\n$ANNOTSV/bin/AnnotSV -SVinputFile \"./input/test-withoutHeader.bed\" -SVinputInfo 1 -outputFile \"./output/test_tcl.annotated.tsv\" -genomeBuild GRCh37\n# => No SV ranking\n# => No Samples_ID\n# Samples_ID   ACMG_class\n# NA           NA\n# NA           NA\nfor v in `$cut \"./output/test_tcl.annotated.tsv\" \"ACMG_class\"`\ndo\n        if ! exists_in_list \"ACMG_class NA\" \" \" \"$v\"\n        then\n                echo \"Error with ./input/test.bed (test 10A)\"\n                echo \"error 1\"\n                exit 1\n        fi\ndone\nfor v in `$cut \"./output/test_tcl.annotated.tsv\" \"Samples_ID\"`\ndo\n        if ! exists_in_list \"Samples_ID NA\" \" \" \"$v\"\n        then\n                echo \"Error with ./input/test.bed (test 10B)\"\n                echo \"error 1\"\n                exit 1\n        fi\ndone\n\n\n\n\nrm -f \"./output/test_tcl.annotated.tsv\"\n$ANNOTSV/bin/AnnotSV -SVinputFile \"./input/test-withoutHeader.bed\" -SVinputInfo 1 -outputFile \"./output/test_tcl.annotated.tsv\" -svtbedcol 4 -genomeBuild GRCh37\n# => No Samples_ID\n# Samples_ID      ACMG_class\n# NA      3\n# NA      1\nfor v in `$cut \"./output/test_tcl.annotated.tsv\" \"ACMG_class\"`\ndo\n        if ! exists_in_list \"ACMG_class 3 1\" \" \" \"$v\"\n        then\n                echo \"Error with ./input/test.bed (test 11A)\"\n                echo \"error 1\"\n                exit 1\n        fi\ndone\nfor v in `$cut \"./output/test_tcl.annotated.tsv\" \"Samples_ID\"`\ndo\n        if ! exists_in_list \"Samples_ID NA\" \" \" \"$v\"\n        then\n                echo \"Error with ./input/test.bed (test 11B)\"\n                echo \"error 1\"\n                exit 1\n        fi\ndone\n\n\nrm -f \"./output/test_tcl.annotated.tsv\"\n$ANNOTSV/bin/AnnotSV -SVinputFile \"./input/test-withoutHeader.bed\" -SVinputInfo 1 -outputFile \"./output/test_tcl.annotated.tsv\" -samplesidBEDcol 5 -genomeBuild GRCh37\n# => No SV ranking\n# Samples_ID      ACMG_class\n# sample1,sampl2  NA\n# sample1         NA\nfor v in `$cut \"./output/test_tcl.annotated.tsv\" \"ACMG_class\"`\ndo\n        if ! exists_in_list \"ACMG_class NA\" \" \" \"$v\"\n        then\n                echo \"Error with ./input/test.bed (test 12A)\"\n                echo \"error 1\"\n                exit 1\n        fi\ndone\nfor v in `$cut \"./output/test_tcl.annotated.tsv\" \"Samples_ID\"`\ndo\n        if ! exists_in_list \"Samples_ID sample1,sampl2 sample1\" \" \" \"$v\"\n        then\n                echo \"Error with ./input/test.bed (test 12B)\"\n                echo \"error 1\"\n                exit 1\n        fi\ndone\n\n\nrm -f \"./output/test_tcl.annotated.tsv\"\n$ANNOTSV/bin/AnnotSV -SVinputFile \"./input/test-withoutHeader.bed\" -SVinputInfo 0 -outputFile \"./output/test_tcl.annotated.tsv\" -svtbedcol 4 -samplesidBEDcol 5 -genomeBuild GRCh37\n# Samples_ID      ACMG_class\n# sample1 \t  3\n# sample1,sampl2  1\nfor v in `$cut \"./output/test_tcl.annotated.tsv\" \"ACMG_class\"`\ndo\n        if ! exists_in_list \"ACMG_class 3 1\" \" \" \"$v\"\n        then\n                echo \"Error with ./input/test.bed (test 13A)\"\n                echo \"error 1\"\n                exit 1\n        fi\ndone\nfor v in `$cut \"./output/test_tcl.annotated.tsv\" \"Samples_ID\"`\ndo\n        if ! exists_in_list \"Samples_ID sample1,sampl2 sample1\" \" \" \"$v\"\n        then\n                echo \"Error with ./input/test.bed (test 13B)\"\n                echo \"error 1\"\n                exit 1\n        fi\ndone\n\n\nrm -f \"./output/test_tcl.annotated.tsv\"\n$ANNOTSV/bin/AnnotSV -SVinputFile \"./input/test-withoutHeader.bed\" -SVinputInfo 0 -outputFile \"./output/test_tcl.annotated.tsv\" -genomeBuild GRCh37\n# => No SV ranking\n# => No Samples_ID\n# Samples_ID      ACMG_class\n# NA      NA\n# NA      NA\nfor v in `$cut \"./output/test_tcl.annotated.tsv\" \"ACMG_class\"`\ndo\n        if ! exists_in_list \"ACMG_class NA\" \" \" \"$v\"\n        then\n                echo \"Error with ./input/test.bed (test 14A)\"\n                echo \"error 1\"\n                exit 1\n        fi\ndone\nfor v in `$cut \"./output/test_tcl.annotated.tsv\" \"Samples_ID\"`\ndo\n        if ! exists_in_list \"Samples_ID NA\" \" \" \"$v\"\n        then\n                echo \"Error with ./input/test.bed (test 14B)\"\n                echo \"error 1\"\n                exit 1\n        fi\ndone\n\n\n\nrm -f \"./output/test_tcl.annotated.tsv\"\n$ANNOTSV/bin/AnnotSV -SVinputFile \"./input/test-withoutHeader.bed\" -SVinputInfo 0 -outputFile \"./output/test_tcl.annotated.tsv\" -svtbedcol 4 -genomeBuild GRCh37\n# => No Samples_ID\n# Samples_ID      ACMG_class\n# NA              3\n# NA              1\nfor v in `$cut \"./output/test_tcl.annotated.tsv\" \"ACMG_class\"`\ndo\n        if ! exists_in_list \"ACMG_class 3 1\" \" \" \"$v\"\n        then\n                echo \"Error with ./input/test.bed (test 15A)\"\n                echo \"error 1\"\n                exit 1\n        fi\ndone\nfor v in `$cut \"./output/test_tcl.annotated.tsv\" \"Samples_ID\"`\ndo\n        if ! exists_in_list \"Samples_ID NA\" \" \" \"$v\"\n        then\n                echo \"Error with ./input/test.bed (test 15B)\"\n                echo \"error 1\"\n                exit 1\n        fi\ndone\n\n\nrm -f \"./output/test_tcl.annotated.tsv\"\n$ANNOTSV/bin/AnnotSV -SVinputFile \"./input/test-withoutHeader.bed\" -SVinputInfo 0 -outputFile \"./output/test_tcl.annotated.tsv\" -samplesidBEDcol 5 -genomeBuild GRCh37\n# => No SV ranking\n# Samples_ID      ACMG_class\n# sample1,sampl2  NA\n# sample1         NA\nfor v in `$cut \"./output/test_tcl.annotated.tsv\" \"ACMG_class\"`\ndo\n        if ! exists_in_list \"ACMG_class NA\" \" \" \"$v\"\n        then\n                echo \"Error with ./input/test.bed (test 16A)\"\n                echo \"error 1\"\n                exit 1\n        fi\ndone\nfor v in `$cut \"./output/test_tcl.annotated.tsv\" \"Samples_ID\"`\ndo\n        if ! exists_in_list \"Samples_ID sample1,sampl2 sample1\" \" \" \"$v\"\n        then\n                echo \"Error with ./input/test.bed (test 16B)\"\n                echo \"error 1\"\n                exit 1\n        fi\ndone\n\n\n\n# SV input VCF file\n###################\n\nrm -f \"./output/test_tcl.unannotated.tsv\"\nrm -f \"./output/test_tcl.annotated.tsv\"\n$ANNOTSV/bin/AnnotSV -SVinputFile \"./input/test.vcf\" -SVinputInfo 1 -outputFile \"./output/test_tcl.annotated.tsv\" -genomeBuild GRCh37\n# $cut \"./output/test_tcl.annotated.tsv\" \"Samples_ID;ACMG_class\"| grep -v full | sort -u\n# Samples_ID      ACMG_class\n# sample1 3\n# sample1,sample2 NA\n# sample2 1\n# sample2 3\n# sample2 NA\n\nannotations=`$cut \"./output/test_tcl.annotated.tsv\" \"ACMG_class\" | grep -v full | sort -u` \nif [ `echo $annotations | grep -c \"1 3 ACMG_class NA\"` != 1 ]\nthen\n        echo \"Error with ./input/test.bed (test 17A)\"\n        echo \"error 1\"\n        exit 1\nfi\n\nfor v in `$cut \"./output/test_tcl.annotated.tsv\" \"Samples_ID\" | grep -v full | sort -u`\ndo\n        if ! exists_in_list \"Samples_ID sample1,sample3 sample1,sample2,sample3 sample2 sample2,sample3\" \" \" \"$v\"\n        then\n                echo \"Error with ./input/test.bed (test 17B)\"\n                echo \"error 1\"\n                exit 1\n        fi\ndone\n\nrm -f \"./output/test_tcl.annotated.tsv\"\n$ANNOTSV/bin/AnnotSV -SVinputFile \"./input/test.vcf\" -SVinputInfo 0 -outputFile \"./output/test_tcl.annotated.tsv\" -genomeBuild GRCh37\n# $cut \"./output/test_tcl.annotated.tsv\" \"Samples_ID;ACMG_class\"| grep -v full | sort -u\n# Samples_ID      ACMG_class\n# sample1 3\n# sample1,sample2 NA\n# sample2 1\n# sample2 3\n# sample2 NA\nannotations=`$cut \"./output/test_tcl.annotated.tsv\" \"ACMG_class\" | grep -v full | sort -u`\nif [ `echo $annotations | grep -c \"1 3 ACMG_class NA\"` != 1 ]\nthen\n        echo \"Error with ./input/test.bed (test 18A)\"\n        echo \"error 1\"\n        exit 1\nfi\n\nfor v in `$cut \"./output/test_tcl.annotated.tsv\" \"Samples_ID\" | grep -v full | sort -u`\ndo\n        if ! exists_in_list \"Samples_ID sample1,sample3 sample1,sample2,sample3 sample2 sample2,sample3\" \" \" \"$v\"\n        then\n                echo \"Error with ./input/test.bed (test 18B)\"\n                echo \"error 1\"\n                exit 1\n        fi\ndone\n\n\n\n\necho \"ok - Finished\"\n\n\n\n"
  },
  {
    "path": "tests/AnnotSV/test_27_Samples_ID/input/test-withoutHeader.bed",
    "content": "13\t19341426\t19360783\tDUP\tsample1\n1\t4204667\t4204717\tDEL\tsample1,sampl2\n"
  },
  {
    "path": "tests/AnnotSV/test_27_Samples_ID/input/test.bed",
    "content": "#Chrom\tstart\tend\tsvtype\tsamplesNames\n13\t19341426\t19360783\tDUP\tsample1\n1\t4204667\t4204717\tDEL\tsample1,sampl2\n"
  },
  {
    "path": "tests/AnnotSV/test_27_Samples_ID/input/test.vcf",
    "content": "##fileformat=VCFv4.2\r\n##source=LUMPY\r\n##INFO=<ID=SVTYPE,Number=1,Type=String,Description=\"Type of structural variant\">\r\n##INFO=<ID=SVLEN,Number=.,Type=Integer,Description=\"Difference in length between REF and ALT alleles\">\r\n##INFO=<ID=END,Number=1,Type=Integer,Description=\"End position of the variant described in this record\">\r\n##INFO=<ID=STRANDS,Number=.,Type=String,Description=\"Strand orientation of the adjacency in BEDPE format (DEL:+-, DUP:-+, INV:++/--)\">\r\n##INFO=<ID=IMPRECISE,Number=0,Type=Flag,Description=\"Imprecise structural variation\">\r\n##INFO=<ID=CIPOS,Number=2,Type=Integer,Description=\"Confidence interval around POS for imprecise variants\">\r\n##INFO=<ID=CIEND,Number=2,Type=Integer,Description=\"Confidence interval around END for imprecise variants\">\r\n##INFO=<ID=CIPOS95,Number=2,Type=Integer,Description=\"Confidence interval (95%) around POS for imprecise variants\">\r\n##INFO=<ID=CIEND95,Number=2,Type=Integer,Description=\"Confidence interval (95%) around END for imprecise variants\">\r\n##INFO=<ID=MATEID,Number=.,Type=String,Description=\"ID of mate breakends\">\r\n##INFO=<ID=EVENT,Number=1,Type=String,Description=\"ID of event associated to breakend\">\r\n##INFO=<ID=SECONDARY,Number=0,Type=Flag,Description=\"Secondary breakend in a multi-line variants\">\r\n##INFO=<ID=SU,Number=.,Type=Integer,Description=\"Number of pieces of evidence supporting the variant across all samples\">\r\n##INFO=<ID=PE,Number=.,Type=Integer,Description=\"Number of paired-end reads supporting the variant across all samples\">\r\n##INFO=<ID=SR,Number=.,Type=Integer,Description=\"Number of split reads supporting the variant across all samples\">\r\n##INFO=<ID=BD,Number=.,Type=Integer,Description=\"Amount of BED evidence supporting the variant across all samples\">\r\n##INFO=<ID=EV,Number=.,Type=String,Description=\"Type of LUMPY evidence contributing to the variant call\">\r\n##INFO=<ID=PRPOS,Number=.,Type=String,Description=\"LUMPY probability curve of the POS breakend\">\r\n##INFO=<ID=PREND,Number=.,Type=String,Description=\"LUMPY probability curve of the END breakend\">\r\n##ALT=<ID=DEL,Description=\"Deletion\">\r\n##ALT=<ID=DUP,Description=\"Duplication\">\r\n##ALT=<ID=INV,Description=\"Inversion\">\r\n##ALT=<ID=DUP:TANDEM,Description=\"Tandem duplication\">\r\n##ALT=<ID=INS,Description=\"Insertion of novel sequence\">\r\n##ALT=<ID=CNV,Description=\"Copy number variable region\">\r\n##FORMAT=<ID=GT,Number=1,Type=String,Description=\"Genotype\">\r\n##FORMAT=<ID=SU,Number=1,Type=Integer,Description=\"Number of pieces of evidence supporting the variant\">\r\n##FORMAT=<ID=PE,Number=1,Type=Integer,Description=\"Number of paired-end reads supporting the variant\">\r\n##FORMAT=<ID=SR,Number=1,Type=Integer,Description=\"Number of split reads supporting the variant\">\r\n##FORMAT=<ID=BD,Number=1,Type=Integer,Description=\"Amount of BED evidence supporting the variant\">\r\n#CHROM\tPOS\tID\tREF\tALT\tQUAL\tFILTER\tINFO\tFORMAT\tsample1\tsample2\tsample3\r\n1\t67452229\t166_1\tN\t[1:67452635[N\t353.30\t.\tSVTYPE=BND;STRANDS=--:33;CIPOS=-2,0;CIEND=-10,9;CIPOS95=0,0;CIEND95=0,0;MATEID=166_2;EVENT=166;SU=33;PE=17;SR=16\tGT\t1/1\t0/1\t./.\r\n1\t67452635\t166_2\tN\t[1:67452229[N\t353.30\t.\tSVTYPE=BND;STRANDS=--:33;CIPOS=-10,9;CIEND=-2,0;CIPOS95=0,0;CIEND95=0,0;MATEID=166_1;EVENT=166;SECONDARY;SU=33;PE=17;SR=16\tGT\t0/0\t0/1\t./.\r\n1\t118091051\t275\tN\t<DEL>\t311.66\t.\tSVTYPE=DEL;SVLEN=-207;END=118091258;STRANDS=+-:13;CIPOS=-10,9;CIEND=-10,9;CIPOS95=0,0;CIEND95=0,0;SU=13;PE=0;SR=13\tGT\t1/0\t0/0\t./.\r\n1\t182884306\t367\tN\t<DEL>\t149.85\t.\tSVTYPE=DEL;SVLEN=-14;END=182884320;STRANDS=+-:7;CIPOS=-5,4;CIEND=-5,4;CIPOS95=0,0;CIEND95=0,0;SU=7;PE=0;SR=7\tGT\t0/0\t0/1\t./.\r\n1\t186826187\t370_1\tN\tN]1:186826404]\t98.88\t.\tSVTYPE=BND;STRANDS=++:8;CIPOS=-10,9;CIEND=-10,9;CIPOS95=0,0;CIEND95=0,0;MATEID=370_2;EVENT=370;SU=8;PE=0;SR=8\tGT\t0/0\t0/1\t0/0\r\n1\t186826404\t370_2\tN\tN]1:186826187]\t98.88\t.\tSVTYPE=BND;STRANDS=++:8;CIPOS=-10,9;CIEND=-10,9;CIPOS95=0,0;CIEND95=0,0;MATEID=370_1;EVENT=370;SECONDARY;SU=8;PE=0;SR=8\tGT\t0/0\t0/1\t0/0\r\n2\t27313898\t606\tN\t<DEL>\t59.61\t.\tSVTYPE=DEL;SVLEN=-127;END=27314025;STRANDS=+-:6;CIPOS=-6,5;CIEND=-6,5;CIPOS95=0,0;CIEND95=0,0;SU=6;PE=0;SR=6\tGT\t0/0\t0/1\t0/0\r\n2\t35576937\t649\tN\t<DEL>\t68.88\t.\tSVTYPE=DEL;SVLEN=-27;END=35576964;STRANDS=+-:8;CIPOS=-10,9;CIEND=-9,9;CIPOS95=0,0;CIEND95=0,0;SU=8;PE=0;SR=8\tGT\t0/0\t0/1\t0/0\r\n2\t88429841\t756\tN\t<DEL>\t296.20\t.\tSVTYPE=DEL;SVLEN=-311;END=88430152;STRANDS=+-:15;CIPOS=-10,9;CIEND=-10,9;CIPOS95=0,0;CIEND95=0,0;SU=15;PE=0;SR=15\tGT\t0/0\t0/1\t./.\r\n2\t129550225\t855\tN\t<DEL>\t4.68\t.\tSVTYPE=DEL;SVLEN=-28;END=129550253;STRANDS=+-:6;CIPOS=-6,5;CIEND=-6,5;CIPOS95=0,0;CIEND95=0,0;SU=6;PE=0;SR=6\tGT\t0/0\t0/1\t./.\r\n2\t224699787\t1036\tN\t<DEL>\t53.85\t.\tSVTYPE=DEL;SVLEN=-10;END=224699797;STRANDS=+-:16;CIPOS=-2,1;CIEND=-2,1;CIPOS95=0,0;CIEND95=0,0;SU=16;PE=0;SR=16\tGT\t0/0\t0/1\t0/0\r\n2\t236378717\t1068\tN\t<DEL>\t99.30\t.\tSVTYPE=DEL;SVLEN=-26;END=236378743;STRANDS=+-:8;CIPOS=-10,9;CIEND=-10,9;CIPOS95=0,0;CIEND95=0,0;SU=8;PE=0;SR=8\tGT\t0/0\t0/1\t0/0\r\n2\t241726086\t1097\tN\t<DEL>\t26.62\t.\tSVTYPE=DEL;SVLEN=-33;END=241726119;STRANDS=+-:8;CIPOS=-10,9;CIEND=-1,7;CIPOS95=0,0;CIEND95=0,0;SU=8;PE=0;SR=8\tGT\t0/0\t0/1\t./.\r\n2\t242411342\t1105\tN\t<DEL>\t137.63\t.\tSVTYPE=DEL;SVLEN=-180;END=242411522;STRANDS=+-:5;CIPOS=-10,9;CIEND=-10,9;CIPOS95=0,0;CIEND95=0,0;SU=5;PE=0;SR=5\tGT\t0/0\t0/1\t0/0\r\n3\t6162950\t1125\tN\t<DEL>\t260.82\t.\tSVTYPE=DEL;SVLEN=-91;END=6163041;STRANDS=+-:8;CIPOS=-10,8;CIEND=-10,9;CIPOS95=0,0;CIEND95=0,0;SU=8;PE=0;SR=8\tGT\t0/0\t0/1\t0/0\r\n3\t7905948\t1132\tN\t<DEL>\t362.44\t.\tSVTYPE=DEL;SVLEN=-202;END=7906150;STRANDS=+-:9;CIPOS=-4,3;CIEND=-4,3;CIPOS95=0,0;CIEND95=0,0;SU=9;PE=0;SR=9\tGT\t0/0\t0/1\t0/0\r\n3\t26450970\t1166\tN\t<DEL>\t563.52\t.\tSVTYPE=DEL;SVLEN=-1328;END=26452298;STRANDS=+-:29;CIPOS=-2,1;CIEND=-10,9;CIPOS95=0,0;CIEND95=0,0;SU=29;PE=14;SR=15\tGT\t0/0\t0/1\t0/0\r\n"
  },
  {
    "path": "tests/AnnotSV/test_28_SVsharingTheSameCoordinatesButWithDifferentSVTYPE/command_Tcl.sh",
    "content": "#!/bin/bash -x\n\nset -eo pipefail\n\n\ncut=\"$ANNOTSV/tests/AnnotSV/scripts/cutWithColumnNames.tcl\"\n\n\n\n# Special case\n##############\n# 2 SVs exist with the same coordinates but with a different type (DEL, DUP):\n# \t1       3777548 4234731 tt      DEL\n# \t1       3777548 4234731 tt      DUP\n\n# => We do have 2 different SVs!\n# We must have full + split annotations for these 2 SVs.\n\nmkdir -p ./output\nrm -f \"./output/test_tcl.annotated.tsv\"\n$ANNOTSV/bin/AnnotSV -SVinputFile \"./input/test.bed\" -svtBEDcol 5 -outputFile \"./output/test_tcl.annotated.tsv\" -genomeBuild GRCh37\n\n# $cut \"./output/test_tcl.annotated.tsv\" \"AnnotSV_ID;SV_chrom;SV_start;SV_end;SV_length;;SV_type;Annotation_mode;Gene_name\"\n# AnnotSV_ID      SV_chrom        SV_start        SV_end  SV_length       SV_type Annotation_mode Gene_name\n# 1_3777548_4234731_DEL_1 1       3777548 4234731 -457183 DEL     full    C1orf174;DFFB;LINC01134;LINC01345;LINC01346\n# 1_3777548_4234731_DEL_1 1       3777548 4234731 -457183 DEL     split   C1orf174\n# 1_3777548_4234731_DEL_1 1       3777548 4234731 -457183 DEL     split   DFFB\n# 1_3777548_4234731_DEL_1 1       3777548 4234731 -457183 DEL     split   LINC01134\n# 1_3777548_4234731_DEL_1 1       3777548 4234731 -457183 DEL     split   LINC01345\n# 1_3777548_4234731_DEL_1 1       3777548 4234731 -457183 DEL     split   LINC01346\n# 1_3777548_4234731_DUP_1 1       3777548 4234731 457183  DUP     full    C1orf174;DFFB;LINC01134;LINC01345;LINC01346\n# 1_3777548_4234731_DUP_1 1       3777548 4234731 457183  DUP     split   C1orf174\n# 1_3777548_4234731_DUP_1 1       3777548 4234731 457183  DUP     split   DFFB\n# 1_3777548_4234731_DUP_1 1       3777548 4234731 457183  DUP     split   LINC01134\n# 1_3777548_4234731_DUP_1 1       3777548 4234731 457183  DUP     split   LINC01345\n# 1_3777548_4234731_DUP_1 1       3777548 4234731 457183  DUP     split   LINC01346\n\nif [ `$cut \"./output/test_tcl.annotated.tsv\" \"AnnotSV_ID;SV_chrom;SV_start;SV_end;SV_length;SV_type;Annotation_mode;Gene_name\" | grep -c \"1_3777549_4234731_DEL_1\"` -gt 1 ]\nthen\n        echo \"Ok\"\nelse\n        echo \"error 1: 1_3777548_4234731_DEL_1 is not correctly reported\"\n        exit 1\nfi\n\nif [ `$cut \"./output/test_tcl.annotated.tsv\" \"AnnotSV_ID;SV_chrom;SV_start;SV_end;SV_length;SV_type;Annotation_mode;Gene_name\" | grep -c \"1_3777549_4234731_DUP_1\"` -gt 1 ]\nthen\n        echo \"Ok\"\nelse\n        echo \"error 1: 1_3777548_4234731_DUP_1 is not correctly reported\"\n        exit 1\nfi\n\n\necho \"ok - Finished\"\n\n"
  },
  {
    "path": "tests/AnnotSV/test_28_SVsharingTheSameCoordinatesButWithDifferentSVTYPE/input/test.bed",
    "content": "1\t3777548\t4234731\ttt\tDEL\n1\t3777548\t4234731\ttt\tDUP\n"
  },
  {
    "path": "tests/AnnotSV/test_29_distNearestSS/command_Tcl.sh",
    "content": "#!/bin/bash -x\n\nset -eo pipefail\n\n\ncut=\"$ANNOTSV/tests/AnnotSV/scripts/cutWithColumnNames.tcl\"\n\n# GRCh37, NM_001037668:\n#######################\n# NCBI RefSeq genes, curated subset (NM_*, NR_*, NP_* or YP_*):\n#   - NM_001037668.1 - chr8:7669242-7673238\n# UCSC annotations of RefSeq RNAs (NM_* and NR_*):\n#   - NM_001037668 - chr8:7669242-7673238\n#   - NM_001037668 - chr8:7353368-7366833\n\n\n#############################################################################################\n## Checking of \"-distNearestSS\"\n#############################################################################################\n\n# Each SV has 2 breakpoints: BND left and BND right\n\n\n# (Strand -) BND left outside the gene + BND right in the last exon of a gene\n#############################################################################\n\n# Input SV: chr8:7669129-7669261\n\n# gr \"NM_001037668\" $ANNOTSV/share/AnnotSV/Annotations_Human/Genes/GRCh37/genes.RefSeq.sorted.bed\n# 8       7669241 7673238 -       DEFB107A        NM_001037668    7669329 7673150 7669241,7673080,        7669472,7673238,\n# => NM_001037668 : strand = -\n\n# The \"SVright\" (7669261) is located in the last exon of the transcript NM_001037668 (7669241-7669472)\n# The BND is 20 bp after the end of the last exon (3') : 7669261 - 7669241 = 20\n#         and 211 bp (7669472 - 7669261)  bp before the start of the exon (last exon => the end of the exon does not correspond to a splice site)\n# => we can only calculate the distance in relation to the site in 3' (acceptor)\n# => distNearestSS = 211 in 3'\n\nmkdir -p ./output\nrm -f \"./output/test1_tcl.annotated.tsv\"\n$ANNOTSV/bin/AnnotSV -SVinputFile \"./input/test1.vcf\" -outputFile \"./output/test1_tcl.annotated.tsv\" -genomeBuild GRCh37\n\n# $cut \"./output/test1_tcl.annotated.tsv\" \"AnnotSV_ID;Annotation_mode;Gene_name;Tx;Location;Location2;Dist_nearest_SS;Nearest_SS_type\"\n# AnnotSV_ID      Annotation_mode Gene_name       Tx      Location        Location2       Dist_nearest_SS Nearest_SS_type\n# 8_7669129_7669261_DEL_1 full    DEFB107A\n# 8_7669129_7669261_DEL_1 split   DEFB107A        NM_001037668    exon2-txEnd     3'UTR   211     3'\n\nannotations=`$cut \"./output/test1_tcl.annotated.tsv\" \"Tx;Dist_nearest_SS;Nearest_SS_type\" | grep \"NM_001037668\"`\nif [ `echo $annotations | grep -c \"NM_001037668 211 3'\"` == 1 ]\nthen\n        echo \"Ok\"\nelse\n        echo \"error 1: Dist_nearest_SS and Nearest_SS_type values for NM_001037668 are not correct (test1)\"\n        exit 1\nfi\n\n# SV that overlaps a gene, but with breakpoints outside the gene\n################################################################\n\n# We must not have a value for distNearestSS\n\n# gr \"bbs10\" $ANNOTSV/share/AnnotSV/Annotations_Human/Genes/GRCh37/genes.RefSeq.sorted.bed\n# 12      76738253        76742195        -       BBS10   NM_024685       76739592        76742138        76738253,76741941,      76741567,76742195,\n# => strand = -\n\n# Input SV: 12:76738000-76742200\nrm -f \"./output/test2_tcl.annotated.tsv\"\n$ANNOTSV/bin/AnnotSV -SVinputFile \"./input/test2.bed\" -outputFile \"./output/test2_tcl.annotated.tsv\" -svtBEDcol 4 -genomeBuild GRCh37\n\n# $cut \"./output/test2_tcl.annotated.tsv\" \"AnnotSV_ID;Annotation_mode;Gene_name;Tx;Location;Location2;Dist_nearest_SS;Nearest_SS_type\"\n# AnnotSV_ID      Annotation_mode Gene_name       Tx      Location        Location2       Dist_nearest_SS Nearest_SS_type\n# 12_76738001_76742200_DEL_1      full    BBS10\n# 12_76738001_76742200_DEL_1      split   BBS10   NM_024685       txStart-txEnd   5'UTR-3'UTR\n\nannotations=`$cut \"./output/test2_tcl.annotated.tsv\" \"Tx;Dist_nearest_SS;Nearest_SS_type\" | grep \"NM_024685\"`\nif [ $annotations == \"NM_024685\" ]\nthen\n        echo \"Ok\"\nelse\n        echo \"error 1: Dist_nearest_SS and Nearest_SS_type values for NM_024685 should be empty (test2)\"\n        exit 1\nfi\n\n\n\n# SV with breakpoints in a gene \"strand -\" : 1 BND in the 1st exon, 1 BND in the intron\n#######################################################################################\n\n# Input SV: 12:76738280-76741600\n\n# gr \"bbs10\"  $ANNOTSV/share/AnnotSV/Annotations_Human/Genes/GRCh37/genes.RefSeq.sorted.bed\n# 12      76738253        76742195        -       BBS10   NM_024685       76739592        76742138        76738253,76741941,      76741567,76742195,\nrm -f \"./output/test3_tcl.annotated.tsv\"\n$ANNOTSV/bin/AnnotSV -SVinputFile \"./input/test3.bed\" -outputFile \"./output/test3_tcl.annotated.tsv\" -svtBEDcol 4 -genomeBuild GRCh37\n\n# $cut \"./output/test3_tcl.annotated.tsv\" \"AnnotSV_ID;Annotation_mode;Gene_name;Tx;Location;Location2;Dist_nearest_SS;Nearest_SS_type\"\n# AnnotSV_ID      Annotation_mode Gene_name       Tx      Location        Location2       Dist_nearest_SS Nearest_SS_type\n# 12_76738281_76741600_DEL_1      full    BBS10\n# 12_76738281_76741600_DEL_1      split   BBS10   NM_024685       intron1-exon2   CDS-3'UTR       33      3'\n\nannotations=`$cut \"./output/test3_tcl.annotated.tsv\" \"Tx;Location;Location2;Dist_nearest_SS;Nearest_SS_type\" | grep NM_024685`\nif [ `echo $annotations | grep -c \"NM_024685 intron1-exon2 CDS-3'UTR 33 3'\"` == 1 ]\nthen\n        echo \"Ok\"\nelse\n        echo \"error 1: Dist_nearest_SS and Nearest_SS_type values for NM_024685 are not correct (test3)\"\n        exit 1\nfi\n\n\n\n# SV with breakpoints in a gene containing many exons, strand +\n###############################################################\n\n# Input SV: 2:170343580-170349500\n\n# gr \"bbs5\" $ANNOTSV/share/AnnotSV/Annotations_Human/Genes/GRCh37/genes.RefSeq.sorted.bed\n# 2       170336003       170363165       +       BBS5    NM_152384       170336063       170361092       170336003,170338760,170343578,170344315,170344496,170349383,170350250,170354136,170355995,170359604,170360812,170360990,    170336122,170338843,170343644,170344365,170344624,170349519,170350346,170354199,170356130,170359688,170360836,170363165,\nrm -f \"./output/test4_tcl.annotated.tsv\"\n$ANNOTSV/bin/AnnotSV -SVinputFile \"./input/test4.bed\" -outputFile \"./output/test4_tcl.annotated.tsv\" -svtBEDcol 4 -genomeBuild GRCh37\n\n# $cut \"./output/test4_tcl.annotated.tsv\" \"AnnotSV_ID;Annotation_mode;Gene_name;Tx;Location;Location2;Dist_nearest_SS;Nearest_SS_type\"\n# AnnotSV_ID      Annotation_mode Gene_name       Tx      Location        Location2       Dist_nearest_SS Nearest_SS_type\n# 2_170343580_170349500_DEL_1     full    BBS5\n# 2_170343580_170349500_DEL_1     split   BBS5    NM_152384       exon3-exon6     CDS     2       3'\n\nannotations=`$cut \"./output/test4_tcl.annotated.tsv\" \"Tx;Location;Location2;Dist_nearest_SS;Nearest_SS_type\" | grep \"NM_152384\"`\nif [ `echo $annotations | grep -c \"NM_152384 exon3-exon6 CDS 2 3'\"` == 1 ]\nthen\n        echo \"Ok\"\nelse\n        echo \"error 1: Dist_nearest_SS and Nearest_SS_type values for NM_152384 are not correct (test4)\"\n        exit 1\nfi\n\n\n# SV with a breakpoint located exactly on the 1st base of an exon\n#################################################################\n\n# Input SV : 2:170343650-170344315\n\n# gr \"bbs5\" $ANNOTSV/share/AnnotSV/Annotations_Human/Genes/GRCh37/genes.RefSeq.sorted.bed\n# 2       170336003       170363165       +       BBS5    NM_152384       170336063       170361092       170336003,170338760,170343578,170344315,170344496,170349383,170350250,170354136,170355995,170359604,170360812,170360990,    170336122,170338843,170343644,170344365,170344624,170349519,170350346,170354199,170356130,170359688,170360836,170363165,\nrm -f \"./output/test5_tcl.annotated.tsv\"\n$ANNOTSV/bin/AnnotSV -SVinputFile \"./input/test5.bed\" -outputFile \"./output/test5_tcl.annotated.tsv\" -svtBEDcol 4 -genomeBuild GRCh37\n\n# $cut \"./output/test5_tcl.annotated.tsv\" \"AnnotSV_ID;Annotation_mode;Gene_name;Tx;Location;Location2;Dist_nearest_SS;Nearest_SS_type\"\n# AnnotSV_ID      Annotation_mode Gene_name       Tx      Location        Location2       Dist_nearest_SS Nearest_SS_type\n# 2_170343650_170344315_DEL_1     full    BBS5\n# 2_170343650_170344315_DEL_1     split   BBS5    NM_152384       intron3-intron3 CDS     0       3'\nannotations=`$cut \"./output/test5_tcl.annotated.tsv\" \"Tx;Location;Location2;Dist_nearest_SS;Nearest_SS_type\" | grep \"NM_152384\"`\nif [ `echo $annotations | grep -c \"NM_152384 intron3-intron3 CDS 0 3'\"` == 1 ]\nthen\n        echo \"Ok\"\nelse\n        echo \"error 1: Dist_nearest_SS and Nearest_SS_type values for NM_152384 are not correct (test5)\"\n        exit 1\nfi\n\n\n\n# SV with one breakpoint that matches exactly the end of one exon, and the other breakpoint that matches exactly the start of another exon\n##########################################################################################################################################\n\n# Input SV: 11:7716419-7716800 DEL\n\n# grep \"NM_198185\" $ANNOTSV/share/AnnotSV/Annotations_Human/Genes/GRCh37/genes.RefSeq.sorted.bed\n# 11      7710667 7728024 -       OVCH2   NM_198185       7711185 7727941 7710667,7711154,7712499,7713132,7716288,7716800,7717231,7718011,7718255,7720296,7721842,7722870,7723262,7723703,7725244,7726111,7727853,    7710833,7711244,7712631,7713226,7716419,7716915,7717257,7718136,7718346,7720320,7722032,7723022,7723358,7723876,7725336,7726221,7728024,\n\nrm -f \"./output/test6_tcl.annotated.tsv\"\n$ANNOTSV/bin/AnnotSV -SVinputFile \"./input/test6.bed\" -outputFile \"./output/test6_tcl.annotated.tsv\" -svtBEDcol 4 -genomeBuild GRCh37\n\n# $cut \"./output/test6_tcl.annotated.tsv\" \"AnnotSV_ID;Annotation_mode;Gene_name;Tx;Location;Location2;Dist_nearest_SS;Nearest_SS_type\"\n# AnnotSV_ID      Annotation_mode Gene_name       Tx      Location        Location2       Dist_nearest_SS Nearest_SS_type\n# 11_7716903_7717219_DEL_1        full    OVCH2\n# 11_7716903_7717219_DEL_1        split   OVCH2   NM_198185       intron12-intron12       CDS     0       3'\nannotations=`$cut \"./output/test6_tcl.annotated.tsv\" \"Tx;Location;Location2;Dist_nearest_SS;Nearest_SS_type\" | grep \"NM_198185\"`\nif [ `echo $annotations | grep -c \"NM_198185 intron12-intron12 CDS 0 3'\"` == 1 ]\nthen\n        echo \"Ok\"\nelse\n        echo \"error 1: Dist_nearest_SS and Nearest_SS_type values for NM_152384 are not correct (test6)\"\n        exit 1\nfi\n\n\n\n\n\n\n\necho \"ok - Finished\"\n\n\n\n"
  },
  {
    "path": "tests/AnnotSV/test_29_distNearestSS/input/test1.vcf",
    "content": "#CHROM\tPOS\tID\tREF\tALT\tQUAL\tFILTER\tINFO\tFORMAT\tALBS\nchr8\t7669129\t.\tN\t<DEL>\t12\tcnvLength\tSVTYPE=CNV;END=7669261\tGT:SM:CN:BC:PE\t0/1:0.604884:1:1:2,2\n"
  },
  {
    "path": "tests/AnnotSV/test_29_distNearestSS/input/test2.bed",
    "content": "12\t76738000\t76742200\tDEL\n"
  },
  {
    "path": "tests/AnnotSV/test_29_distNearestSS/input/test3.bed",
    "content": "12\t76738280\t76741600\tDEL\n"
  },
  {
    "path": "tests/AnnotSV/test_29_distNearestSS/input/test4.bed",
    "content": "2\t170343580\t170349500\tDEL\n"
  },
  {
    "path": "tests/AnnotSV/test_29_distNearestSS/input/test5.bed",
    "content": "2\t170343650\t170344315\tDEL\n"
  },
  {
    "path": "tests/AnnotSV/test_29_distNearestSS/input/test6.bed",
    "content": "11\t7716419\t7716800\tDEL\n"
  },
  {
    "path": "tests/AnnotSV/test_30_Ranking/command_Tcl.sh",
    "content": "#!/bin/bash -x\n\nset -eo pipefail\n\n\ncut=\"$ANNOTSV/tests/AnnotSV/scripts/cutWithColumnNames.tcl\"\n\n\n\n###################################\n# Annotation method used in AnnotSV\n###################################\n\n# In each section, only 1 criterion (from the most pathogenic to the least) is assigned.\n\n# Example in the section 2:\n###########################\n# https://github.com/lgmgeo/AnnotSV/issues/41\n# https://github.com/lgmgeo/AnnotSV/issues/40\n\n# 1_108190708_108194629_DEL\n\n# In the following example, criterion 2F is filled but not assigned because criterion 2C-1 is filled and more pathogenic.\n\n# 2C-1\n# => The SLC25A24 gene is an OMIM morbid gene. \n# => Regarding the DEL used as input, the 2C-1 criteria is verified (coding sequence of the morbid gene is involved).\n\n# 2F: Completely contained within an established benign CNV region.\n\nmkdir -p ./output\nrm -f \"./output/test_tcl.annotated.tsv\"\n$ANNOTSV/bin/AnnotSV -SVinputFile \"./input/test.bed\" -svtBEDcol 4 -genomeBuild GRCh38 -outputFile \"./output/test_tcl.annotated.tsv\"\n\n# $cut \"./output/test_tcl.annotated.tsv\" \"AnnotSV_ID;Annotation_mode;AnnotSV_ranking_score;AnnotSV_ranking_criteria;ACMG_class\"\n# AnnotSV_ID      Annotation_mode AnnotSV_ranking_score   AnnotSV_ranking_criteria        ACMG_class\n# 1_108190709_108194629_DEL_1     full    0.9     1A (cf Gene_count, RE_gene, +0.00);2C-1 (SLC25A24, +0.90);3A (1 gene, +0.00);5F (+0.00) 4\n# 1_108190709_108194629_DEL_1     split                   full=4\n\nannotations=`$cut \"./output/test_tcl.annotated.tsv\" \"Annotation_mode;AnnotSV_ranking_score;AnnotSV_ranking_criteria;ACMG_class\" | egrep -v \"full=|AnnotSV_ranking_criteria\"` \n\nif [ `echo $annotations | grep -c \"full 0.9 1A (cf Gene_count, RE_gene, +0.00);2C-1 (SLC25A24, +0.90);3A (1 gene, +0.00);5F (+0.00) 4\"` == 1 ]\nthen\n        echo \"Ok\"\nelse\n        echo \"error 1: Dist_nearest_SS and Nearest_SS_type values for NM_001037668 are not correct (test1)\"\n        exit 1\nfi\n\n\necho \"ok - Finished\"\n\n\n"
  },
  {
    "path": "tests/AnnotSV/test_30_Ranking/input/test.bed",
    "content": "1\t108190708\t108194629\tDEL\n"
  },
  {
    "path": "tests/AnnotSV/test_31_Cytoband/command_Tcl.sh",
    "content": "#!/bin/bash -x\n\nset -eo pipefail\n\n\ncut=\"$ANNOTSV/tests/AnnotSV/scripts/cutWithColumnNames.tcl\"\n\n\n# Integration of cytoband annotations:\n######################################\n\n# Request sur GitHub:\n# https://github.com/lgmgeo/AnnotSV/issues/52\n\n# Input SV\n# chr17\t1\t18960000\tDEL\n\n# GRCh37 cytoband file:\n# grep \"^17\" $ANNOTSV/share/AnnotSV/Annotations_Human/AnyOverlap/CytoBand/GRCh37/cytoBand_GRCh37.formatted.sorted.bed | head -5\n# chr17   0       3300000 p13.3   gneg\n# chr17   3300000 6500000 p13.2   gpos50\n# chr17   6500000 10700000        p13.1   gneg\n# chr17   10700000        16000000        p12     gpos75\n# chr17   16000000        22200000        p11.2   gneg\n\n# Expected annotation:\n# p13.3-p11.2\n\n\n# GRCh37:\n#########\nmkdir -p ./output\nrm -f \"./output/test.GRCh37_tcl.annotated.tsv\"\n$ANNOTSV/bin/AnnotSV -SVinputFile \"./input/test.bed\" -svtBEDcol 4 -outputFile \"./output/test.GRCh37_tcl.annotated.tsv\" -overlap 1 -genomeBuild GRCh37\n\n# $cut \"./output/test.GRCh37_tcl.annotated.tsv\" \"AnnotSV_ID;Annotation_mode;CytoBand\" | gr full\n# 17_1_18960000_DEL_1     full    p13.3-p11.2\nannotations=`$cut \"./output/test.GRCh37_tcl.annotated.tsv\" \"AnnotSV_ID;Annotation_mode;CytoBand\" | grep full`\nif [ `echo $annotations | grep -c \"p13.3-p11.2\"` == 1 ]\nthen\n        echo \"Ok\"\nelse\n        echo \"error 1: cytoband annotations are not correct (GRCh37)\"\n        exit 1\nfi\n\n\n# GRCh38:\n#########\nrm -f \"./output/test.GRCh38_tcl.annotated.tsv\"\n$ANNOTSV/bin/AnnotSV -SVinputFile \"./input/test.bed\" -svtBEDcol 4 -outputFile \"./output/test.GRCh38_tcl.annotated.tsv\" -overlap 1 -genomeBuild GRCh38\n\n# $cut \"./output/test.GRCh38_tcl.annotated.tsv\" \"AnnotSV_ID;Annotation_mode;CytoBand\" | gr full\n# 17_1_18960000_DEL_1     full    p13.3-p11.2\nannotations=`$cut \"./output/test.GRCh38_tcl.annotated.tsv\" \"AnnotSV_ID;Annotation_mode;CytoBand\" | grep full`\nif [ `echo $annotations | grep -c \"p13.3-p11.2\"` == 1 ]\nthen\n        echo \"Ok\"\nelse\n        echo \"error 1: cytoband annotations are not correct (GRCh38)\"\n        exit 1\nfi\n\n\necho \"ok - Finished\"\n\n\n"
  },
  {
    "path": "tests/AnnotSV/test_31_Cytoband/input/test.bed",
    "content": "chr17\t1\t18960000\tDEL\n"
  },
  {
    "path": "tests/AnnotSV/test_32_metrics/command_Tcl.sh",
    "content": "#!/bin/bash -x\n\nset -eo pipefail\n\n\ncut=\"$ANNOTSV/tests/AnnotSV/scripts/cutWithColumnNames.tcl\"\n\nfunction exists_in_list() {\n    LIST=$1\n    DELIMITER=$2\n    VALUE=$3\n    [[ \"$LIST\" =~ ($DELIMITER|^)$VALUE($DELIMITER|$) ]]\n}\n\n\n# Option \"-metrics\": changing numerical values from frequencies to us or fr metrics (e.g. 0.2 or 0,2)\n# us: 0.2\n# fr: 0,2\n# WARNING: If the \"-metrics\" option is set to \"fr\", this should not affect the ranking\n\n\n## Checking: \n## - The \".\" are replaced with \",\"\n## - The ranking stay the same\n\n\n\n# -metrics \"us\" (default)\n#########################\nmkdir -p ./output\nrm -f \"./output/output.us_tcl.annotated.tsv\"\n$ANNOTSV/bin/AnnotSV -SVinputFile \"./input/input.bed\" -SVinputInfo 1 -outputFile \"./output/output.us_tcl.annotated.tsv\" -svtbedcol 4 -genomeBuild GRCh37\n\n# $cut \"./output/output.us_tcl.annotated.tsv\" \"B_gain_AFmax;B_loss_AFmax;B_ins_AFmax;B_inv_AFmax;GC_content_left;DDD_HI_percent;ExAC_synZ;GnomAD_pLI;ExAC_pLI;AnnotSV_ranking_score;AnnotSV_ranking_criteria;ACMG_class\"\n# B_gain_AFmax    B_loss_AFmax    B_ins_AFmax     B_inv_AFmax     GC_content_left DDD_HI_percent  ExAC_synZ       GnomAD_pLI      ExAC_pLI        AnnotSV_ranking_score   AnnotSV_ranking_criteria        ACMG_class\n# 0.01    0.0927          0.1667  0.340   0.27    -2.65362022636097       1.0000e+00      1.0000e+00      0.9     1A (cf Gene_count, RE_gene, +0.00);2C-1 (DMD, +0.90);3A (1 gene, +0.00);5F (+0.00)      4\n# 0.01    0.0927          0.1667          0.27    -2.65362022636097       1.0000e+00      1.0000e+00                      full=4\n#         0.0237          0.0845  0.435   4.17    0.0512652381981393      9.9443e-01      9.9912e-01      0.15    1A (cf Gene_count, RE_gene, +0.00);2H (DIAPH2, +0.15);3A (1 gene, +0.00);5F (+0.00)     3\n#         0.0237          0.0845          4.17    0.0512652381981393      9.9443e-01      9.9912e-01                      full=3\n\n\nfor v in `$cut \"./output/output.us_tcl.annotated.tsv\" \"ACMG_class\" | sort -u`\ndo\n        if ! exists_in_list \"3 4 ACMG_class full=3 full=4\" \" \" \"$v\"\n        then\n                echo \"Error with the ranking (-metrics us)\"\n                echo \"error 1\"\n                exit 1\n        fi\ndone\n\nannotations=`$cut \"./output/output.us_tcl.annotated.tsv\" \"B_gain_AFmax;B_loss_AFmax;B_ins_AFmax;B_inv_AFmax;GC_content_left;DDD_HI_percent;ExAC_synZ;GnomAD_pLI;ExAC_pLI;AnnotSV_ranking_score;AnnotSV_ranking_criteria;ACMG_class\" | grep -v \"full=\"`\n\nif [ `echo $annotations | tr \" \" \"\\n\" | grep -c \"[0-9]\\\\.[0-9]\"` -gt 0 ] \nthen\n\tif [ `echo $annotations | tr \" \" \"\\n\" | grep -c \"[0-9]\\\\,[0-9]\"` -eq 0 ]\n\tthen\n        echo \"Ok\"\n\telse\n        echo \"error 1: Error with the ranking (-metrics us)\"\n        exit 1\n\tfi\nfi\n\n\n\n# -metrics \"fr\"\n###############\nrm -f \"./output/output.fr_tcl.annotated.tsv\"\n$ANNOTSV/bin/AnnotSV -SVinputFile \"./input/input.bed\" -SVinputInfo 1 -metrics fr -outputFile \"./output/output.fr_tcl.annotated.tsv\" -svtbedcol 4 -genomeBuild GRCh37\n\n# $cut \"./output/output.fr_tcl.annotated.tsv\" \"B_gain_AFmax;B_loss_AFmax;B_ins_AFmax;B_inv_AFmax;GC_content_left;DDD_HI_percent;ExAC_synZ;GnomAD_pLI;ExAC_pLI;AnnotSV_ranking_score;AnnotSV_ranking_criteria;ACMG_class\"\n# B_gain_AFmax    B_loss_AFmax    B_ins_AFmax     B_inv_AFmax     GC_content_left DDD_HI_percent  ExAC_synZ       GnomAD_pLI      ExAC_pLI        AnnotSV_ranking_score   AnnotSV_ranking_criteria        ACMG_class\n# 0,01    0,0927          0,1667  0,340   0,27    -2,65362022636097       1,0     1,0     0,9     1A (cf Gene_count, RE_gene, +0.00);2C-1 (DMD, +0.90);3A (1 gene, +0.00);5F (+0.00)      4\n# 0,01    0,0927          0,1667          0,27    -2,65362022636097       1,0     1,0                     full=4\n#         0,0237          0,0845  0,435   4,17    0,0512652381981393      0,99443 0,99912 0,15    1A (cf Gene_count, RE_gene, +0.00);2H (DIAPH2, +0.15);3A (1 gene, +0.00);5F (+0.00)     3\n#         0,0237          0,0845          4,17    0,0512652381981393      0,99443 0,99912                 full=3\n\n\nfor v in `$cut \"./output/output.fr_tcl.annotated.tsv\" \"ACMG_class\" | sort -u`\ndo\n        if ! exists_in_list \"3 4 ACMG_class full=3 full=4\" \" \" \"$v\"\n        then\n                echo \"Error with the ranking (-metrics fr)\"\n                echo \"error 1\"\n                exit 1\n        fi\ndone\n\nannotations=`$cut \"./output/output.fr_tcl.annotated.tsv\" \"B_gain_AFmax;B_loss_AFmax;B_ins_AFmax;B_inv_AFmax;GC_content_left;DDD_HI_percent;ExAC_synZ;GnomAD_pLI;ExAC_pLI;AnnotSV_ranking_score;AnnotSV_ranking_criteria;ACMG_class\" | grep -v \"full=\"`\n\nif [ `echo $annotations | tr \" \" \"\\n\" | grep -c \"[0-9]\\\\.[0-9]\"` -eq 0 ]\nthen\n\tif [ `echo $annotations | tr \" \" \"\\n\" | grep -c \"[0-9]\\\\,[0-9]\"` -gt 0 ]\n\tthen\n        echo \"Ok\"\n\telse\n        echo \"error 1: Error with the ranking (-metrics fr)\"\n        exit 1\n\tfi\nfi\n\n\n\necho \"ok - Finished\"\n\n\n\n"
  },
  {
    "path": "tests/AnnotSV/test_32_metrics/input/input.bed",
    "content": "X\t96619122\t96623156\tDEL\nX\t32430304\t32431577\tDEL\n"
  },
  {
    "path": "tests/AnnotSV/test_33_webSiteExample/command_Tcl.sh",
    "content": "#!/bin/bash -x\n\nset -eo pipefail\n\n\ncut=\"$ANNOTSV/tests/AnnotSV/scripts/cutWithColumnNames.tcl\"\n\nfunction exists_in_list() {\n    LIST=$1\n    DELIMITER=$2\n    VALUE=$3\n    [[ \"$LIST\" =~ ($DELIMITER|^)$VALUE($DELIMITER|$) ]]\n}\n\n\n\n# Test of the BED file example available at the AnnotSV website (=/home/geoffroy/www/AnnotSV/web/Documentation/test.bed)\n########################################################################################################################\n\nmkdir -p ./output\nrm -f \"./output/test_tcl.annotated.tsv\"\n$ANNOTSV/bin/AnnotSV -SVinputFile \"./input/test.bed\" -SVinputInfo 1 -outputFile \"./output/test_tcl.annotated.tsv\" -svtBEDcol 4 -genomeBuild GRCh37\n\n# Look at the last column of the file (SV ranking) and check that there is no shift:\n\nfor v in `$cut \"./output/test_tcl.annotated.tsv\" \"ACMG_class\" | sort -u`\ndo\n        if ! exists_in_list \"1 3 4 5 ACMG_class full=1 full=3 full=4 full=5 full=NA NA\" \" \" \"$v\"\n        then\n                echo \"Error with the BED file example available at the AnnotSV website: shift in the ranking\"\n                echo \"error 1\"\n                exit 1\n        fi\ndone\n\n\n\necho \"ok - Finished\"\n\n"
  },
  {
    "path": "tests/AnnotSV/test_33_webSiteExample/input/test.bed",
    "content": "# chrom\tStart\tEnd\tVariant_type\tSamples_ID\tBiologist_annotation\tBiologist_ranking\n4\t71552\t9371067\tDEL\tsample1\t4p-syndrom\tPathogenic\n5\t723194\t777000\tDUP sample1\t\tBenign\n7\t110276505\t110478039\tINS sample1\t\tNA\n11\t66287088\t66288847\tDEL sample1\tBBS1_internal_frameshift\tPathogenic\n15\t34735949\t34806953\tDEL sample1\t\tBenign\n16\t1565629\t1571297\tDUP\tsample1\tIFT140_tandem_duplication\tPathogenic\n"
  },
  {
    "path": "tests/AnnotSV/test_34_bracketedToAngularNotations/README",
    "content": "cd $ANNOTSV/tests/data/test_37_bracketedToAngularNotations/input/\n\n\nA same SV is described with different notations:\n- square-bracketed notation in VCF\n- angle-bracketed notation in VCF\n- BED format\n\n=> We should obtain equivalent results for each SV type\n\n\n# VCF with square-bracketed notation\n####################################\n\nll input-square-bracketed-*vcf\n-rwx------ 1 geoffroy lgm  275 Mar 23 13:35 input-square-bracketed-del_1.vcf\n-rwx------ 1 geoffroy lgm  345 Mar 23 13:35 input-square-bracketed-del_partial_pass.vcf\n-rwx------ 1 geoffroy lgm  307 Mar 23 13:35 input-square-bracketed-del_unordered.vcf\n-rwx------ 1 geoffroy lgm  263 Mar 23 13:35 input-square-bracketed-dup.vcf\n-rwx------ 1 geoffroy lgm  273 Mar 23 13:35 input-square-bracketed-empty_del.vcf\n-rwx------ 1 geoffroy lgm  283 Mar 23 13:35 input-square-bracketed-ins_by_gridss.vcf\n-rwx------ 1 geoffroy lgm  271 Mar 23 13:35 input-square-bracketed-inv1.vcf\n-rw-r--r-- 1 geoffroy lgm  271 May 30 15:44 input-square-bracketed-inv2.vcf\n-rw-r--r-- 1 geoffroy lgm 3851 May 30 16:06 input-square-bracketed-inv3.vcf\n-rwxr-xr-x 1 geoffroy lgm 1845 Mar 23 13:35 input-square-bracketed-tra1.vcf\n-rwx------ 1 geoffroy lgm  263 Mar 23 13:35 input-square-bracketed-tra2.vcf\n\n\n# VCF with angle-bracketed notation\n###################################\nll input-angle-bracketed-*vcf\n-rwx------ 1 geoffroy lgm 160 Mar 23 13:35 input-angle-bracketed-del_1.vcf\n-rwx------ 1 geoffroy lgm 195 Mar 23 13:35 input-angle-bracketed-del_partial_pass.vcf\n-rwx------ 1 geoffroy lgm 154 Mar 23 13:35 input-angle-bracketed-dup.vcf\n-rwx------ 1 geoffroy lgm 159 Mar 23 13:35 input-angle-bracketed-empty_del.vcf\n-rwx------ 1 geoffroy lgm 137 Mar 23 13:35 input-angle-bracketed-ins_by_gridss.vcf\n-rwx------ 1 geoffroy lgm 159 Mar 23 13:35 input-angle-bracketed-inv1.vcf\n-rwx------ 1 geoffroy lgm 159 Mar 23 13:35 input-angle-bracketed-inv2.vcf\n-rwxr-xr-x 1 geoffroy lgm 201 Mar 23 13:35 input-angle-bracketed-tra1.vcf\n-rwx------ 1 geoffroy lgm 250 Mar 23 13:35 input-angle-bracketed-tra2.vcf\n\n\n# BED with \"DEL/DUP/INV...\" notations\n#####################################\nll *bed\n-rwx------ 1 geoffroy lgm 34 Mar 23 13:35 input-del_1.bed\n-rwx------ 1 geoffroy lgm 45 Mar 23 13:35 input-del_partial_pass.bed\n-rwx------ 1 geoffroy lgm 31 Mar 23 13:35 input-dup.bed\n-rwx------ 1 geoffroy lgm 37 Mar 23 13:35 input-empty_del.bed\n-rwx------ 1 geoffroy lgm 54 Mar 23 13:35 input-ins_by_gridss.bed\n-rwx------ 1 geoffroy lgm 33 Mar 23 13:35 input-inv1.bed\n-rwx------ 1 geoffroy lgm 33 Mar 23 13:35 input-inv2.bed\n-rwxr-xr-x 1 geoffroy lgm 53 Mar 23 13:35 input-tra1.bed\n\n\n"
  },
  {
    "path": "tests/AnnotSV/test_34_bracketedToAngularNotations/Rodrigo_tests_ignore/Difficult/README",
    "content": "Rodrigo:\nI have attached two VCF files named \"test\" and \"test_difficult\". \nBoth are valid VCF files and contain the same variants. \nHowever, the \"test_difficult\" does not have the correct output in AnnotSV. \nI don't want to split hairs here, so the only one that I find troublesome is the TRA because it is missing the other breakend annotation.\n\n\nVéro:\nRegarding your test_difficile.vcf, my feeling is different and undecided. \nI'm not sure it's a good idea to add a missing breakend, because in some cases the features of each breakend are different for an SV, especially the GT.\n\n\n"
  },
  {
    "path": "tests/AnnotSV/test_34_bracketedToAngularNotations/Rodrigo_tests_ignore/Difficult/test.vcf",
    "content": "##fileformat=VCFv4.1\n##contig=<ID=1,length=249250621>\n##contig=<ID=2,length=243199373>\n##contig=<ID=3,length=198022430>\n##contig=<ID=4,length=191154276>\n##contig=<ID=5,length=180915260>\n##contig=<ID=6,length=171115067>\n##contig=<ID=7,length=159138663>\n##contig=<ID=8,length=146364022>\n##contig=<ID=9,length=141213431>\n##contig=<ID=10,length=135534747>\n##contig=<ID=11,length=135006516>\n##contig=<ID=12,length=133851895>\n##contig=<ID=13,length=115169878>\n##contig=<ID=14,length=107349540>\n##contig=<ID=15,length=102531392>\n##contig=<ID=16,length=90354753>\n##contig=<ID=17,length=81195210>\n##contig=<ID=18,length=78077248>\n##contig=<ID=19,length=59128983>\n##contig=<ID=20,length=63025520>\n##contig=<ID=21,length=48129895>\n##contig=<ID=22,length=51304566>\n##contig=<ID=X,length=155270560>\n##contig=<ID=Y,length=59373566>\n##FORMAT=<ID=GT,Number=1,Type=String,Description=\"Genotype\">\n##FORMAT=<ID=AD,Number=R,Type=Integer,Description=\"Allelic depths for the ref and alt alleles in the order listed\">\n##INFO=<ID=SVLEN,Number=1,Type=Integer,Description=\"Length of the SV\">\n##INFO=<ID=SVTYPE,Number=1,Type=String,Description=\"Type of the SV\">\n##INFO=<ID=SUPP_SEQ,Number=.,Type=String,Description=\"Vector of supporting technologies\">\n##INFO=<ID=SUPP_VAL,Number=.,Type=String,Description=\"Vector of supporting technologies\">\n##INFO=<ID=GENE,Number=.,Type=String,Description=\"Gene(s) overlap in breakpoint\">\n##INFO=<ID=CLUSTER,Number=.,Type=String,Description=\"IDs of other clustered breakpoints\">\n##INFO=<ID=EXTRA,Number=.,Type=String,Description=\"Extra info for testing\">\n##INFO=<ID=END,Number=1,Type=Integer,Description=\"End position of the variant described in this record\">\n#CHROM\tPOS\tID\tREF\tALT\tQUAL\tFILTER\tINFO\tFORMAT\tNORMAL\tTUMOR\n2\t3000\tbreakend_dup_a\tT\t]2:5000]T\t.\tPASS\tSVTYPE=BND;EXTRA=DUP_PAIRED;MATEID=breakend_dup_b\tGT\t0/0\t0/1\n2\t5000\tbreakend_dup_b\tT\tT[2:3000[\t.\tPASS\tSVTYPE=BND;EXTRA=DUP_PAIRED;MATEID=breakend_dup_a\tGT\t0/0\t0/1\n2\t5000\tshorthand_dup\tT\t<DUP>\t.\tPASS\tEND=5000;SVTYPE=BND;EXTRA=SHORTHAND_DUP\tGT\t0/0\t0/1\n3\t2999\tbreakend_inv_1_a\tT\tT]3:5000]\t.\tPASS\tSVTYPE=BND;EXTRA=INV_PAIRED;MATEID=breakend_inv_1_b\tGT\t0/0\t0/1\n3\t5000\tbreakend_inv_1_b\tT\t[3:2999[T\t.\tPASS\tSVTYPE=BND;EXTRA=INV_PAIRED;MATEID=breakend_inv_1_a\tGT\t0/0\t0/1\n3\t3000\tbreakend_inv_2_a\tT\t[3:5001[T\t.\tPASS\tSVTYPE=BND;EXTRA=INV_PAIRED;MATEID=breakend_inv_2_b\tGT\t0/0\t0/1\n3\t5001\tbreakend_inv_2_b\tT\tT]3:3000]\t.\tPASS\tSVTYPE=BND;EXTRA=INV_PAIRED;MATEID=breakend_inv_2_a\tGT\t0/0\t0/1\n3\t3000\tcomplete_inv\tT\t<INV>\t.\tPASS\tSVTYPE=INV;END=5000;EXTRA=INV_SHORTHAND\tGT\t0/0\t0/1\n17\t198982\ttra_no_mateid_a\tA\tA]2:321681]\t.\tPASS\tSVTYPE=BND;EXTRA=TRA_PAIRED_WITHOUT_MATE_ID\tGT\t0/0\t0/1\n2\t321681\ttra_no_mateid_b\tG\tG]17:198982]\t.\tPASS\tSVTYPE=BND;EXTRA=TRA_PAIRED_WITHOUT_MATE_ID\tGT\t0/0\t0/1\n12\t3000\tbreakend_del_1_a\tT\tT[12:5000[\t.\tPASS\tSVTYPE=BND;EXTRA=DEL_PAIRED;MATEID=breakend_del_1_b\tGT\t0/0\t0/1\n12\t5000\tbreakend_del_1_b\tT\t]12:3000]T\t.\tPASS\tSVTYPE=BND;EXTRA=DEL_PAIRED;MATEID=breakend_del_1_a\tGT\t0/0\t0/1\n12\t3000\tshorthand_del\tT\t<DEL>\t.\tPASS\tSVTYPE=DEL;END=5000;EXTRA=DEL_SHORTHAND\tGT\t0/0\t0/1\n22\t5000\tbreakend_del_unordered_b\tT\t]22:3000]T\t.\tPASS\tSVTYPE=BND;EXTRA=DEL_PAIRED;MATEID=breakend_del_unordered_a\tGT\t0/0\t0/1\n15\t5000\tbreakend_del_partial_pass_a\tT\t]15:3000]T\t.\tFAIL\tSVTYPE=BND;EXTRA=DEL_PAIRED_PARTIAL_PASS;MATEID=breakend_del_partial_pass_b\tGT\t0/0\t0/1\n15\t3000\tbreakend_del_partial_pass_b\tT\tT[15:5000[\t.\tPASS\tSVTYPE=BND;EXTRA=DEL_PAIRED_PARTIAL_PASS;MATEID=breakend_del_partial_pass_a\tGT\t0/0\t0/1\n13\t53040041\tins_by_gridss\tT\tTATATATATACACAC[13:53040042[\t.\tPASS\tSVTYPE=BND;EXTRA=DEL_INS_FROM_GRIDSS\tGT\t0/0\t0/1\n13\t53040042\tins_by_gridss\tA\t]13:53040041]ATATATATACACACA\t.\tPASS\tSVTYPE=BND;EXTRA=DEL_INS_FROM_GRIDSS\tGT\t0/0\t0/1\n15\t53040041\tempty_del_a\tT\tT[15:53040042[\t.\tPASS\tSVTYPE=BND;EXTRA=DEL_NO_SIZE;MATEID=empty_del_b\tGT\t0/0\t0/1\n15\t53040042\tempty_del_b\tA\t]15:53040041]A\t.\tPASS\tSVTYPE=BND;EXTRA=DEL_NO_SIZE;MATEID=empty_del_a\tGT\t0/0\t0/1\n22\t3000\tbreakend_del_unordered_a\tT\tT[22:5000[\t.\tPASS\tSVTYPE=BND;EXTRA=DEL_PAIRED;MATEID=breakend_del_unordered_b\tGT\t0/0\t0/1\n"
  },
  {
    "path": "tests/AnnotSV/test_34_bracketedToAngularNotations/Rodrigo_tests_ignore/Difficult/test_difficult.vcf",
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  },
  {
    "path": "tests/AnnotSV/test_34_bracketedToAngularNotations/Rodrigo_tests_ignore/Outputs/command_20_square-bracketed-inv2.annotated.tsv",
    "content": "AnnotSV_ID\tSV_chrom\tSV_start\tSV_end\tSV_length\tSV_type\tSamples_ID\tID\tREF\tALT\tQUAL\tFILTER\tINFO\tFORMAT\tNORMAL\tTUMOR\tAnnotation_mode\tCytoBand\tGene_name\tGene_count\tTx\tTx_start\tTx_end\tOverlapped_tx_length\tOverlapped_CDS_length\tOverlapped_CDS_percent\tFrameshift\tExon_count\tLocation\tLocation2\tDist_nearest_SS\tNearest_SS_type\tIntersect_start\tIntersect_end\tRE_gene\tP_gain_phen\tP_gain_hpo\tP_gain_source\tP_gain_coord\tP_loss_phen\tP_loss_hpo\tP_loss_source\tP_loss_coord\tP_ins_phen\tP_ins_hpo\tP_ins_source\tP_ins_coord\tpo_P_gain_phen\tpo_P_gain_hpo\tpo_P_gain_source\tpo_P_gain_coord\tpo_P_gain_percent\tpo_P_loss_phen\tpo_P_loss_hpo\tpo_P_loss_source\tpo_P_loss_coord\tpo_P_loss_percent\tP_snvindel_nb\tP_snvindel_phen\tB_gain_source\tB_gain_coord\tB_gain_AFmax\tB_loss_source\tB_loss_coord\tB_loss_AFmax\tB_ins_source\tB_ins_coord\tB_ins_AFmax\tB_inv_source\tB_inv_coord\tB_inv_AFmax\tpo_B_gain_allG_source\tpo_B_gain_allG_coord\tpo_B_gain_someG_source\tpo_B_gain_someG_coord\tpo_B_loss_allG_source\tpo_B_loss_allG_coord\tpo_B_loss_someG_source\tpo_B_loss_someG_coord\tCosmic_ID\tCosmic_mut_typ\tGC_content_left\tGC_content_right\tRepeat_coord_left\tRepeat_type_left\tRepeat_coord_right\tRepeat_type_right\tGap_left\tGap_right\tSegDup_left\tSegDup_right\tENCODE_blacklist_left\tENCODE_blacklist_characteristics_left\tENCODE_blacklist_right\tENCODE_blacklist_characteristics_right\tACMG\tHI\tTS\tDDD_HI_percent\tExAC_delZ\tExAC_dupZ\tExAC_cnvZ\tExAC_synZ\tExAC_misZ\tGenCC_disease\tGenCC_moi\tGenCC_classification\tGenCC_pmid\tOMIM_ID\tOMIM_phenotype\tOMIM_inheritance\tOMIM_morbid\tOMIM_morbid_candidate\tLOEUF_bin\tGnomAD_pLI\tExAC_pLI\tAnnotSV_ranking_score\tAnnotSV_ranking_criteria\tACMG_class\n3_3000_5001_INV_1\t3\t3000\t5001\t2001\tINV\tTUMOR\tbreakend_inv_2_b\tN\t<INV>\t.\tPASS\tSVTYPE=BND;EXTRA=INV_PAIRED;MATEID=breakend_inv_2_a;BNDrescue\tGT\t0/0\t0/1\tfull\tp26.3\t\t0\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t0.000 (200 N)\t0.000 (200 N)\t\t\t\t\t3:1-10000\t3:1-10000\t\t\t3:1-11600\tHigh Signal Region\t3:1-11600\tHigh Signal Region\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tNA\n"
  },
  {
    "path": "tests/AnnotSV/test_34_bracketedToAngularNotations/Rodrigo_tests_ignore/Outputs/input_OnlyTheReciprocalBND_square-bracketed-tra1_1.annotated.tsv",
    "content": "AnnotSV_ID\tSV_chrom\tSV_start\tSV_end\tSV_length\tSV_type\tSamples_ID\tID\tREF\tALT\tQUAL\tFILTER\tINFO\tFORMAT\tNORMAL\tTUMOR\tAnnotation_mode\tCytoBand\tGene_name\tGene_count\tTx\tTx_start\tTx_end\tOverlapped_tx_length\tOverlapped_CDS_length\tOverlapped_CDS_percent\tFrameshift\tExon_count\tLocation\tLocation2\tDist_nearest_SS\tNearest_SS_type\tIntersect_start\tIntersect_end\tRE_gene\tP_gain_phen\tP_gain_hpo\tP_gain_source\tP_gain_coord\tP_loss_phen\tP_loss_hpo\tP_loss_source\tP_loss_coord\tP_ins_phen\tP_ins_hpo\tP_ins_source\tP_ins_coord\tpo_P_gain_phen\tpo_P_gain_hpo\tpo_P_gain_source\tpo_P_gain_coord\tpo_P_gain_percent\tpo_P_loss_phen\tpo_P_loss_hpo\tpo_P_loss_source\tpo_P_loss_coord\tpo_P_loss_percent\tP_snvindel_nb\tP_snvindel_phen\tB_gain_source\tB_gain_coord\tB_gain_AFmax\tB_loss_source\tB_loss_coord\tB_loss_AFmax\tB_ins_source\tB_ins_coord\tB_ins_AFmax\tB_inv_source\tB_inv_coord\tB_inv_AFmax\tpo_B_gain_allG_source\tpo_B_gain_allG_coord\tpo_B_gain_someG_source\tpo_B_gain_someG_coord\tpo_B_loss_allG_source\tpo_B_loss_allG_coord\tpo_B_loss_someG_source\tpo_B_loss_someG_coord\tCosmic_ID\tCosmic_mut_typ\tGC_content_left\tGC_content_right\tRepeat_coord_left\tRepeat_type_left\tRepeat_coord_right\tRepeat_type_right\tGap_left\tGap_right\tSegDup_left\tSegDup_right\tENCODE_blacklist_left\tENCODE_blacklist_characteristics_left\tENCODE_blacklist_right\tENCODE_blacklist_characteristics_right\tACMG\tHI\tTS\tDDD_HI_percent\tExAC_delZ\tExAC_dupZ\tExAC_cnvZ\tExAC_synZ\tExAC_misZ\tGenCC_disease\tGenCC_moi\tGenCC_classification\tGenCC_pmid\tOMIM_ID\tOMIM_phenotype\tOMIM_inheritance\tOMIM_morbid\tOMIM_morbid_candidate\tLOEUF_bin\tGnomAD_pLI\tExAC_pLI\tAnnotSV_ranking_score\tAnnotSV_ranking_criteria\tACMG_class\n13_123456_123456_TRA_1\t13\t123456\t123456\t0\tTRA\tTUMOR\ttra_a\tN\t<TRA>\t.\tPASS\tSVTYPE=BND;BNDrescue\tGT\t0/0\t0/1\tfull\tp13\t\t0\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t0.000 (200 N)\t0.000 (200 N)\t\t\t\t\t13:10001-16000000\t13:10001-16000000\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tNA\n2_321682_321682_TRA_1\t2\t321682\t321682\t0\tTRA\tTUMOR\ttra_a\tT\t]13:123456]T\t.\tPASS\tSVTYPE=BND\tGT\t0/0\t0/1\tfull\tp25.3\tLINC01865\t1\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tdbVar:nssv15161672;dbVar:nssv15161098;dbVar:nssv15161566;dbVar:nssv15152820;dbVar:nssv15775408;nssv15775409;dbVar:nssv15161685;nssv15161863;dbVar:nssv15174359;dbVar:nssv15174602;dbVar:nssv15161093;dbVar:nssv15161076;dbVar:nssv15138133;dbVar:nssv15136679;dbVar:nssv15161534;dbVar:nssv15122991;dbVar:nssv15133088;dbVar:nssv15139535;dbVar:nssv15161739;dbVar:nssv15119871;dbVar:nssv15161279;dbVar:nssv15161375\t2:12771-19881713;2:12771-25039694;2:12771-33711509;2:12771-4776035;2:12771-7362665;2:12772-241841232;2:14239-242106609;2:15673-242157305;2:17020-20001056;2:17020-26318846;2:17020-4957745;2:24401-817581;2:30342-28419664;2:30342-4642399;2:30342-4932359;2:30342-507042;2:30343-14866951;2:50662-9652907;2:66098-55570637;2:236817-45983232\t0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00\t\t\tdbVar:nssv17956024;dbVar:nssv15138126;dbVar:nssv15776261;dbVar:nssv15138226;dbVar:nssv15775014;dbVar:nssv16207779;dbVar:nssv15134632;dbVar:nssv15138552;dbVar:nssv15133933;dbVar:nssv15136368;dbVar:nssv15133613;dbVar:nssv15136209;dbVar:nssv15119947;dbVar:nssv15137919\t2:10502-2383145;2:12771-2310816;2:12771-2345104;2:12771-2748672;2:12771-2829122;2:12771-2997182;2:17020-1645317;2:17020-2305267;2:30342-1969402;2:30342-2656139;2:30342-3449132;2:39194-1542734;2:50662-3293835;2:131731-2713517\t0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t0.450\t0.450\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tNA\n2_321682_321682_TRA_1\t2\t321682\t321682\t0\tTRA\tTUMOR\ttra_a\tT\t]13:123456]T\t.\tPASS\tSVTYPE=BND\tGT\t0/0\t0/1\tsplit\tp25.3\tLINC01865\t\tNR_146953\t316283\t337054\t1\t0\t0\tno\t4\tintron2-exon3\tUTR\t0\t3'\t321681\t321682\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tfull=NA\n"
  },
  {
    "path": "tests/AnnotSV/test_34_bracketedToAngularNotations/Rodrigo_tests_ignore/Outputs/input_OnlyTheReciprocalBND_square-bracketed-tra1_2.annotated.tsv",
    "content": "AnnotSV_ID\tSV_chrom\tSV_start\tSV_end\tSV_length\tSV_type\tSamples_ID\tID\tREF\tALT\tQUAL\tFILTER\tINFO\tFORMAT\tNORMAL\tTUMOR\tAnnotation_mode\tCytoBand\tGene_name\tGene_count\tTx\tTx_start\tTx_end\tOverlapped_tx_length\tOverlapped_CDS_length\tOverlapped_CDS_percent\tFrameshift\tExon_count\tLocation\tLocation2\tDist_nearest_SS\tNearest_SS_type\tIntersect_start\tIntersect_end\tRE_gene\tP_gain_phen\tP_gain_hpo\tP_gain_source\tP_gain_coord\tP_loss_phen\tP_loss_hpo\tP_loss_source\tP_loss_coord\tP_ins_phen\tP_ins_hpo\tP_ins_source\tP_ins_coord\tpo_P_gain_phen\tpo_P_gain_hpo\tpo_P_gain_source\tpo_P_gain_coord\tpo_P_gain_percent\tpo_P_loss_phen\tpo_P_loss_hpo\tpo_P_loss_source\tpo_P_loss_coord\tpo_P_loss_percent\tP_snvindel_nb\tP_snvindel_phen\tB_gain_source\tB_gain_coord\tB_gain_AFmax\tB_loss_source\tB_loss_coord\tB_loss_AFmax\tB_ins_source\tB_ins_coord\tB_ins_AFmax\tB_inv_source\tB_inv_coord\tB_inv_AFmax\tpo_B_gain_allG_source\tpo_B_gain_allG_coord\tpo_B_gain_someG_source\tpo_B_gain_someG_coord\tpo_B_loss_allG_source\tpo_B_loss_allG_coord\tpo_B_loss_someG_source\tpo_B_loss_someG_coord\tCosmic_ID\tCosmic_mut_typ\tGC_content_left\tGC_content_right\tRepeat_coord_left\tRepeat_type_left\tRepeat_coord_right\tRepeat_type_right\tGap_left\tGap_right\tSegDup_left\tSegDup_right\tENCODE_blacklist_left\tENCODE_blacklist_characteristics_left\tENCODE_blacklist_right\tENCODE_blacklist_characteristics_right\tACMG\tHI\tTS\tDDD_HI_percent\tExAC_delZ\tExAC_dupZ\tExAC_cnvZ\tExAC_synZ\tExAC_misZ\tGenCC_disease\tGenCC_moi\tGenCC_classification\tGenCC_pmid\tOMIM_ID\tOMIM_phenotype\tOMIM_inheritance\tOMIM_morbid\tOMIM_morbid_candidate\tLOEUF_bin\tGnomAD_pLI\tExAC_pLI\tAnnotSV_ranking_score\tAnnotSV_ranking_criteria\tACMG_class\n13_123456_123456_TRA_1\t13\t123456\t123456\t0\tTRA\tTUMOR\ttra_b\tC\tC[2:321682[\t.\tPASS\tSVTYPE=BND\tGT\t0/0\t0/1\tfull\tp13\t\t0\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t0.000 (200 N)\t0.000 (200 N)\t\t\t\t\t13:10001-16000000\t13:10001-16000000\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tNA\n2_321682_321682_TRA_1\t2\t321682\t321682\t0\tTRA\tTUMOR\ttra_b\tN\t<TRA>\t.\tPASS\tSVTYPE=BND;BNDrescue\tGT\t0/0\t0/1\tfull\tp25.3\tLINC01865\t1\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tdbVar:nssv15161672;dbVar:nssv15161098;dbVar:nssv15161566;dbVar:nssv15152820;dbVar:nssv15775408;nssv15775409;dbVar:nssv15161685;nssv15161863;dbVar:nssv15174359;dbVar:nssv15174602;dbVar:nssv15161093;dbVar:nssv15161076;dbVar:nssv15138133;dbVar:nssv15136679;dbVar:nssv15161534;dbVar:nssv15122991;dbVar:nssv15133088;dbVar:nssv15139535;dbVar:nssv15161739;dbVar:nssv15119871;dbVar:nssv15161279;dbVar:nssv15161375\t2:12771-19881713;2:12771-25039694;2:12771-33711509;2:12771-4776035;2:12771-7362665;2:12772-241841232;2:14239-242106609;2:15673-242157305;2:17020-20001056;2:17020-26318846;2:17020-4957745;2:24401-817581;2:30342-28419664;2:30342-4642399;2:30342-4932359;2:30342-507042;2:30343-14866951;2:50662-9652907;2:66098-55570637;2:236817-45983232\t0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00\t\t\tdbVar:nssv17956024;dbVar:nssv15138126;dbVar:nssv15776261;dbVar:nssv15138226;dbVar:nssv15775014;dbVar:nssv16207779;dbVar:nssv15134632;dbVar:nssv15138552;dbVar:nssv15133933;dbVar:nssv15136368;dbVar:nssv15133613;dbVar:nssv15136209;dbVar:nssv15119947;dbVar:nssv15137919\t2:10502-2383145;2:12771-2310816;2:12771-2345104;2:12771-2748672;2:12771-2829122;2:12771-2997182;2:17020-1645317;2:17020-2305267;2:30342-1969402;2:30342-2656139;2:30342-3449132;2:39194-1542734;2:50662-3293835;2:131731-2713517\t0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t0.450\t0.450\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tNA\n2_321682_321682_TRA_1\t2\t321682\t321682\t0\tTRA\tTUMOR\ttra_b\tN\t<TRA>\t.\tPASS\tSVTYPE=BND;BNDrescue\tGT\t0/0\t0/1\tsplit\tp25.3\tLINC01865\t\tNR_146953\t316283\t337054\t1\t0\t0\tno\t4\tintron2-exon3\tUTR\t0\t3'\t321681\t321682\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tfull=NA\n"
  },
  {
    "path": "tests/AnnotSV/test_34_bracketedToAngularNotations/Rodrigo_tests_ignore/README",
    "content": "# Mail de Rodrigo Martin le 07/02/2023\n######################################\n\nI have attached to this email the VCF file that I used for my tests and the output generated by my tool in CSV format. \n\nThe breakend notated variants (with the square brackets []) are paired, that means that the reciprocal breakend is also present in the VCF file (they are usually paired using their MATEID property in the INFO field). Note that even though they appear as two \"variants\", they represent the same biological variant and should be treated as such (you can see that my tool only outputs one variant, even if it comes from two paired breakends).\n \n\n# Fichier test de Rodrigo :\n###########################\n\nll $ANNOTSV/tests//data//test_37_bracketedToAngularNotations/Rodrigo_tests_ignore/\ndrwxr-xr-x 2 geoffroy lgm   75 Mar 23 13:35 Difficult\n-rwx------ 1 geoffroy lgm 1093 Mar 23 13:35 output.csv\n-rw-r--r-- 1 geoffroy lgm 1176 May 30 16:04 README\n-rwx------ 1 geoffroy lgm 3747 Mar 23 13:35 severalSVTYPE-square-bracketed.vcf\n-rwx------ 1 geoffroy lgm 4517 Mar 23 13:35 test_paired.vcf\n-rw-r--r-- 1 geoffroy lgm  173 Mar 23 13:35 tra.output.csv\n-rwx------ 1 geoffroy lgm 1923 Mar 23 13:35 tra.vcf\n\n\n# Outil \"variant-extractor\" de Rodrigo : \n########################################\n\n/maison/geoffroy/variant-extractor\n\n\n\n=> On extrait les square-bracketed :\n/gstock/LGM/analysisOfSV/AnnotSV/Test_AnnotSV/37_bracketedToAngularNotations/Rodrigo-tests/severalSVTYPE-square-bracketed.vcf\n\n=> On crée un fichier VCF par SV (+ pratique pour les tests) :\nll input-square-bracketed-*vcf\n-rwx------ 1 geoffroy lgm 275 Feb 28 14:31 input-square-bracketed-del_1.vcf\n-rwx------ 1 geoffroy lgm 345 Feb 28 14:32 input-square-bracketed-del_partial_pass.vcf\n-rwx------ 1 geoffroy lgm 307 Feb 28 14:31 input-square-bracketed-del_unordered.vcf\n-rwx------ 1 geoffroy lgm 263 Feb 28 14:24 input-square-bracketed-dup.vcf\n-rwx------ 1 geoffroy lgm 273 Feb 28 14:33 input-square-bracketed-empty_del.vcf\n-rwx------ 1 geoffroy lgm 283 Feb 28 14:33 input-square-bracketed-ins_by_gridss.vcf\n-rwx------ 1 geoffroy lgm 271 Feb 28 14:26 input-square-bracketed-inv1.vcf\n-rwx------ 1 geoffroy lgm 271 Feb 28 14:26 input-square-bracketed-inv2.vcf\n-rwx------ 1 geoffroy lgm 263 Feb 28 14:30 input-square-bracketed-tra1.vcf\n-rwxr-xr-x 1 geoffroy lgm 181 Feb  9 18:06 input-square-bracketed-tra2.vcf\n\n=> On crée les équivalents VCF en angle-bracketed\nll input-angle-bracketed-*vcf\n-rwx------ 1 geoffroy lgm 160 Mar  3 15:23 input-angle-bracketed-del_1.vcf\n-rwx------ 1 geoffroy lgm 195 Mar  3 15:00 input-angle-bracketed-del_partial_pass.vcf\n-rwx------ 1 geoffroy lgm 154 Mar  3 15:01 input-angle-bracketed-dup.vcf\n-rwx------ 1 geoffroy lgm 159 Mar  3 15:05 input-angle-bracketed-empty_del.vcf\n-rwx------ 1 geoffroy lgm 137 Mar  3 15:05 input-angle-bracketed-ins_by_gridss.vcf\n-rwx------ 1 geoffroy lgm 159 Mar  3 15:06 input-angle-bracketed-inv1.vcf\n-rwx------ 1 geoffroy lgm 159 Mar  3 15:06 input-angle-bracketed-inv2.vcf\n-rwxr-xr-x 1 geoffroy lgm 130 Mar  3 16:11 input-angle-bracketed-tra1.vcf\n-rwx------ 1 geoffroy lgm 250 Mar  3 15:08 input-angle-bracketed-tra2.vcf\n\n=> On crée les équivalents en BED\nll *bed\n-rwx------ 1 geoffroy lgm 34 Mar  3 11:52 input-del_1.bed\n-rwx------ 1 geoffroy lgm 45 Mar  3 11:53 input-del_partial_pass.bed\n-rwx------ 1 geoffroy lgm 31 Mar  3 11:53 input-dup.bed\n-rwx------ 1 geoffroy lgm 37 Mar  3 11:53 input-empty_del.bed\n-rwx------ 1 geoffroy lgm 54 Mar  3 11:53 input-ins_by_gridss.bed\n-rwx------ 1 geoffroy lgm 33 Mar  3 11:53 input-inv1.bed\n-rwx------ 1 geoffroy lgm 33 Mar  3 11:53 input-inv2.bed\n-rwxr-xr-x 1 geoffroy lgm 53 Mar  3 11:53 input-tra1.bed\n\n\n"
  },
  {
    "path": "tests/AnnotSV/test_34_bracketedToAngularNotations/Rodrigo_tests_ignore/output.csv",
    "content": "id,start_chrom,start,end_chrom,end,ref,alt,length,brackets,type_inferred\nsnv,1,100,1,100,G,A,1,,SNV\nmultiallelic_0,1,1000,1,1000,G,C,1,,SNV\nmultiallelic_1,1,1000,1,1000,G,T,1,,SNV\nmnp_0,1,1500,1,1500,G,A,1,,SNV\nmnp_1,1,1501,1,1501,A,C,1,,SNV\nnormal_del,1,2000,1,2001,CT,C,1,N[,DEL\ncomplex_del,1,2200,1,2206,CCTGAAA,CGA,6,N[,DEL\nnormal_ins,1,2100,1,2100,C,CAA,2,,INS\ncomplex_ins,1,2300,1,2301,GT,CAATATATA,8,,INS\nbreakend_dup_a,2,3000,2,5000,T,]2:5000]T,2000,]N,DUP\nshorthand_dup,2,5000,2,5000,T,<DUP>,0,]N,DUP\nbreakend_inv_1_a,3,2999,3,5000,T,T]3:5000],2001,N],INV\nbreakend_inv_2_a,3,3000,3,5001,T,[3:5001[T,2001,[N,INV\ncomplete_inv_1,3,2999,3,5000,N,N]3:5000],2001,N],INV\ncomplete_inv_2,3,3000,3,5001,T,[3:5001[T,2001,[N,INV\ntrn_no_mateid_b,2,321681,17,198982,G,G]17:198982],0,N]],TRN\nbreakend_del_1_a,12,3000,12,5000,T,T[12:5000[,2000,N[,DEL\nshorthand_del,12,3000,12,5000,T,<DEL>,2000,N[,DEL\nbreakend_del_partial_pass_b,15,3000,15,5000,T,T[15:5000[,2000,N[,DEL\nins_by_gridss,13,53040041,13,53040041,T,TATATATATACACAC,14,,INS\nbreakend_del_unordered_a,22,3000,22,5000,T,T[22:5000[,2000,N[,DEL\n"
  },
  {
    "path": "tests/AnnotSV/test_34_bracketedToAngularNotations/Rodrigo_tests_ignore/severalSVTYPE-square-bracketed.vcf",
    "content": "##fileformat=VCFv4.1\n##contig=<ID=1,length=249250621>\n##contig=<ID=2,length=243199373>\n##contig=<ID=3,length=198022430>\n##contig=<ID=4,length=191154276>\n##contig=<ID=5,length=180915260>\n##contig=<ID=6,length=171115067>\n##contig=<ID=7,length=159138663>\n##contig=<ID=8,length=146364022>\n##contig=<ID=9,length=141213431>\n##contig=<ID=10,length=135534747>\n##contig=<ID=11,length=135006516>\n##contig=<ID=12,length=133851895>\n##contig=<ID=13,length=115169878>\n##contig=<ID=14,length=107349540>\n##contig=<ID=15,length=102531392>\n##contig=<ID=16,length=90354753>\n##contig=<ID=17,length=81195210>\n##contig=<ID=18,length=78077248>\n##contig=<ID=19,length=59128983>\n##contig=<ID=20,length=63025520>\n##contig=<ID=21,length=48129895>\n##contig=<ID=22,length=51304566>\n##contig=<ID=X,length=155270560>\n##contig=<ID=Y,length=59373566>\n##FORMAT=<ID=GT,Number=1,Type=String,Description=\"Genotype\">\n##FORMAT=<ID=AD,Number=R,Type=Integer,Description=\"Allelic depths for the ref and alt alleles in the order listed\">\n##INFO=<ID=SVLEN,Number=1,Type=Integer,Description=\"Length of the SV\">\n##INFO=<ID=SVTYPE,Number=1,Type=String,Description=\"Type of the SV\">\n##INFO=<ID=SUPP_SEQ,Number=.,Type=String,Description=\"Vector of supporting technologies\">\n##INFO=<ID=SUPP_VAL,Number=.,Type=String,Description=\"Vector of supporting technologies\">\n##INFO=<ID=GENE,Number=.,Type=String,Description=\"Gene(s) overlap in breakpoint\">\n##INFO=<ID=CLUSTER,Number=.,Type=String,Description=\"IDs of other clustered breakpoints\">\n##INFO=<ID=EXTRA,Number=.,Type=String,Description=\"Extra info for testing\">\n##INFO=<ID=END,Number=1,Type=Integer,Description=\"End position of the variant described in this record\">\n#CHROM\tPOS\tID\tREF\tALT\tQUAL\tFILTER\tINFO\tFORMAT\tNORMAL\tTUMOR\n2\t3000\tbreakend_dup_a\tT\t]2:5000]T\t.\tPASS\tSVTYPE=BND;EXTRA=DUP_PAIRED;MATEID=breakend_dup_b\tGT\t0/0\t0/1\n2\t5000\tbreakend_dup_b\tT\tT[2:3000[\t.\tPASS\tSVTYPE=BND;EXTRA=DUP_PAIRED;MATEID=breakend_dup_a\tGT\t0/0\t0/1\n3\t2999\tbreakend_inv_1_a\tT\tT]3:5000]\t.\tPASS\tSVTYPE=BND;EXTRA=INV_PAIRED;MATEID=breakend_inv_1_b\tGT\t0/0\t0/1\n3\t5000\tbreakend_inv_1_b\tT\t[3:2999[T\t.\tPASS\tSVTYPE=BND;EXTRA=INV_PAIRED;MATEID=breakend_inv_1_a\tGT\t0/0\t0/1\n3\t3000\tbreakend_inv_2_a\tT\t[3:5001[T\t.\tPASS\tSVTYPE=BND;EXTRA=INV_PAIRED;MATEID=breakend_inv_2_b\tGT\t0/0\t0/1\n3\t5001\tbreakend_inv_2_b\tT\tT]3:3000]\t.\tPASS\tSVTYPE=BND;EXTRA=INV_PAIRED;MATEID=breakend_inv_2_a\tGT\t0/0\t0/1\n17\t198982\ttrn_no_mateid_a\tA\tA]2:321681]\t.\tPASS\tSVTYPE=BND;EXTRA=TRN_PAIRED_WITHOUT_MATE_ID\tGT\t0/0\t0/1\n2\t321681\ttrn_no_mateid_b\tG\tG]17:198982]\t.\tPASS\tSVTYPE=BND;EXTRA=TRN_PAIRED_WITHOUT_MATE_ID\tGT\t0/0\t0/1\n12\t3000\tbreakend_del_1_a\tT\tT[12:5000[\t.\tPASS\tSVTYPE=BND;EXTRA=DEL_PAIRED;MATEID=breakend_del_1_b\tGT\t0/0\t0/1\n12\t5000\tbreakend_del_1_b\tT\t]12:3000]T\t.\tPASS\tSVTYPE=BND;EXTRA=DEL_PAIRED;MATEID=breakend_del_1_a\tGT\t0/0\t0/1\n22\t5000\tbreakend_del_unordered_b\tT\t]22:3000]T\t.\tPASS\tSVTYPE=BND;EXTRA=DEL_PAIRED;MATEID=breakend_del_unordered_a\tGT\t0/0\t0/1\n15\t5000\tbreakend_del_partial_pass_a\tT\t]15:3000]T\t.\tFAIL\tSVTYPE=BND;EXTRA=DEL_PAIRED_PARTIAL_PASS;MATEID=breakend_del_partial_pass_b\tGT\t0/0\t0/1\n15\t3000\tbreakend_del_partial_pass_b\tT\tT[15:5000[\t.\tPASS\tSVTYPE=BND;EXTRA=DEL_PAIRED_PARTIAL_PASS;MATEID=breakend_del_partial_pass_a\tGT\t0/0\t0/1\n13\t53040041\tins_by_gridss\tT\tTATATATATACACAC[13:53040042[\t.\tPASS\tSVTYPE=BND;EXTRA=DEL_INS_FROM_GRIDSS\tGT\t0/0\t0/1\n13\t53040042\tins_by_gridss\tA\t]13:53040041]ATATATATACACACA\t.\tPASS\tSVTYPE=BND;EXTRA=DEL_INS_FROM_GRIDSS\tGT\t0/0\t0/1\n15\t53040041\tempty_del_a\tT\tT[15:53040042[\t.\tPASS\tSVTYPE=BND;EXTRA=DEL_NO_SIZE;MATEID=empty_del_b\tGT\t0/0\t0/1\n15\t53040042\tempty_del_b\tA\t]15:53040041]A\t.\tPASS\tSVTYPE=BND;EXTRA=DEL_NO_SIZE;MATEID=empty_del_a\tGT\t0/0\t0/1\n22\t3000\tbreakend_del_unordered_a\tT\tT[22:5000[\t.\tPASS\tSVTYPE=BND;EXTRA=DEL_PAIRED;MATEID=breakend_del_unordered_b\tGT\t0/0\t0/1\n"
  },
  {
    "path": "tests/AnnotSV/test_34_bracketedToAngularNotations/Rodrigo_tests_ignore/test_paired.vcf",
    "content": "##fileformat=VCFv4.1\n##contig=<ID=1,length=249250621>\n##contig=<ID=2,length=243199373>\n##contig=<ID=3,length=198022430>\n##contig=<ID=4,length=191154276>\n##contig=<ID=5,length=180915260>\n##contig=<ID=6,length=171115067>\n##contig=<ID=7,length=159138663>\n##contig=<ID=8,length=146364022>\n##contig=<ID=9,length=141213431>\n##contig=<ID=10,length=135534747>\n##contig=<ID=11,length=135006516>\n##contig=<ID=12,length=133851895>\n##contig=<ID=13,length=115169878>\n##contig=<ID=14,length=107349540>\n##contig=<ID=15,length=102531392>\n##contig=<ID=16,length=90354753>\n##contig=<ID=17,length=81195210>\n##contig=<ID=18,length=78077248>\n##contig=<ID=19,length=59128983>\n##contig=<ID=20,length=63025520>\n##contig=<ID=21,length=48129895>\n##contig=<ID=22,length=51304566>\n##contig=<ID=X,length=155270560>\n##contig=<ID=Y,length=59373566>\n##FORMAT=<ID=GT,Number=1,Type=String,Description=\"Genotype\">\n##FORMAT=<ID=AD,Number=R,Type=Integer,Description=\"Allelic depths for the ref and alt alleles in the order listed\">\n##INFO=<ID=SVLEN,Number=1,Type=Integer,Description=\"Length of the SV\">\n##INFO=<ID=SVTYPE,Number=1,Type=String,Description=\"Type of the SV\">\n##INFO=<ID=SUPP_SEQ,Number=.,Type=String,Description=\"Vector of supporting technologies\">\n##INFO=<ID=SUPP_VAL,Number=.,Type=String,Description=\"Vector of supporting technologies\">\n##INFO=<ID=GENE,Number=.,Type=String,Description=\"Gene(s) overlap in breakpoint\">\n##INFO=<ID=CLUSTER,Number=.,Type=String,Description=\"IDs of other clustered breakpoints\">\n##INFO=<ID=EXTRA,Number=.,Type=String,Description=\"Extra info for testing\">\n##INFO=<ID=END,Number=1,Type=Integer,Description=\"End position of the variant described in this record\">\n#CHROM\tPOS\tID\tREF\tALT\tQUAL\tFILTER\tINFO\tFORMAT\tNORMAL\tTUMOR\n1\t50\tno_change\tT\tT\t.\tPASS\tEXTRA=NO_CHANGE\tGT\t0/0\t0/1\n1\t100\tsnv\tG\tA\t.\tPASS\tEXTRA=DUMMY_SNV\tGT\t0/0\t0/1\n1\t1000\tmultiallelic\tG\tC,T\t.\tPASS\tEXTRA=SNV_MULTIALLELIC\tGT:AD\t0/0:162,6,8,3\t0/1/2:237,9,16,6\n1\t1500\tmnp\tGAA\tACA\t.\tPASS\tEXTRA=DUMMY_MNP\tGT\t0/0\t0/1\n1\t2000\tnormal_del\tCT\tC\t.\tPASS\tEXTRA=DUMMY_DEL\tGT\t0/0\t0/1\n1\t2200\tcomplex_del\tCCTGAAA\tCGA\t.\tPASS\tEXTRA=DUMMY_COMPLEX_DEL\tGT\t0/0\t0/1\n1\t2100\tnormal_ins\tC\tCAA\t.\tPASS\tEXTRA=DUMMY_INS\tGT\t0/0\t0/1\n1\t2300\tcomplex_ins\tGT\tCAATATATA\t.\tPASS\tEXTRA=DUMMY_COMPLEX_INS\tGT\t0/0\t0/1\n2\t3000\tbreakend_dup_a\tT\t]2:5000]T\t.\tPASS\tSVTYPE=BND;EXTRA=DUP_PAIRED;MATEID=breakend_dup_b\tGT\t0/0\t0/1\n2\t5000\tbreakend_dup_b\tT\tT[2:3000[\t.\tPASS\tSVTYPE=BND;EXTRA=DUP_PAIRED;MATEID=breakend_dup_a\tGT\t0/0\t0/1\n2\t5000\tshorthand_dup\tT\t<DUP>\t.\tPASS\tEND=5000;SVTYPE=BND;EXTRA=SHORTHAND_DUP\tGT\t0/0\t0/1\n3\t2999\tbreakend_inv_1_a\tT\tT]3:5000]\t.\tPASS\tSVTYPE=BND;EXTRA=INV_PAIRED;MATEID=breakend_inv_1_b\tGT\t0/0\t0/1\n3\t5000\tbreakend_inv_1_b\tT\t[3:2999[T\t.\tPASS\tSVTYPE=BND;EXTRA=INV_PAIRED;MATEID=breakend_inv_1_a\tGT\t0/0\t0/1\n3\t3000\tbreakend_inv_2_a\tT\t[3:5001[T\t.\tPASS\tSVTYPE=BND;EXTRA=INV_PAIRED;MATEID=breakend_inv_2_b\tGT\t0/0\t0/1\n3\t5001\tbreakend_inv_2_b\tT\tT]3:3000]\t.\tPASS\tSVTYPE=BND;EXTRA=INV_PAIRED;MATEID=breakend_inv_2_a\tGT\t0/0\t0/1\n3\t3000\tcomplete_inv\tT\t<INV>\t.\tPASS\tSVTYPE=INV;END=5000;EXTRA=INV_SHORTHAND\tGT\t0/0\t0/1\n17\t198982\ttrn_no_mateid_a\tA\tA]2:321681]\t.\tPASS\tSVTYPE=BND;EXTRA=TRN_PAIRED_WITHOUT_MATE_ID\tGT\t0/0\t0/1\n2\t321681\ttrn_no_mateid_b\tG\tG]17:198982]\t.\tPASS\tSVTYPE=BND;EXTRA=TRN_PAIRED_WITHOUT_MATE_ID\tGT\t0/0\t0/1\n12\t3000\tbreakend_del_1_a\tT\tT[12:5000[\t.\tPASS\tSVTYPE=BND;EXTRA=DEL_PAIRED;MATEID=breakend_del_1_b\tGT\t0/0\t0/1\n12\t5000\tbreakend_del_1_b\tT\t]12:3000]T\t.\tPASS\tSVTYPE=BND;EXTRA=DEL_PAIRED;MATEID=breakend_del_1_a\tGT\t0/0\t0/1\n12\t3000\tshorthand_del\tT\t<DEL>\t.\tPASS\tSVTYPE=DEL;END=5000;EXTRA=DEL_SHORTHAND\tGT\t0/0\t0/1\n22\t5000\tbreakend_del_unordered_b\tT\t]22:3000]T\t.\tPASS\tSVTYPE=BND;EXTRA=DEL_PAIRED;MATEID=breakend_del_unordered_a\tGT\t0/0\t0/1\n15\t5000\tbreakend_del_partial_pass_a\tT\t]15:3000]T\t.\tFAIL\tSVTYPE=BND;EXTRA=DEL_PAIRED_PARTIAL_PASS;MATEID=breakend_del_partial_pass_b\tGT\t0/0\t0/1\n15\t3000\tbreakend_del_partial_pass_b\tT\tT[15:5000[\t.\tPASS\tSVTYPE=BND;EXTRA=DEL_PAIRED_PARTIAL_PASS;MATEID=breakend_del_partial_pass_a\tGT\t0/0\t0/1\n13\t53040041\tins_by_gridss\tT\tTATATATATACACAC[13:53040042[\t.\tPASS\tSVTYPE=BND;EXTRA=DEL_INS_FROM_GRIDSS\tGT\t0/0\t0/1\n13\t53040042\tins_by_gridss\tA\t]13:53040041]ATATATATACACACA\t.\tPASS\tSVTYPE=BND;EXTRA=DEL_INS_FROM_GRIDSS\tGT\t0/0\t0/1\n15\t53040041\tempty_del_a\tT\tT[15:53040042[\t.\tPASS\tSVTYPE=BND;EXTRA=DEL_NO_SIZE;MATEID=empty_del_b\tGT\t0/0\t0/1\n15\t53040042\tempty_del_b\tA\t]15:53040041]A\t.\tPASS\tSVTYPE=BND;EXTRA=DEL_NO_SIZE;MATEID=empty_del_a\tGT\t0/0\t0/1\n22\t3000\tbreakend_del_unordered_a\tT\tT[22:5000[\t.\tPASS\tSVTYPE=BND;EXTRA=DEL_PAIRED;MATEID=breakend_del_unordered_b\tGT\t0/0\t0/1\n"
  },
  {
    "path": "tests/AnnotSV/test_34_bracketedToAngularNotations/Rodrigo_tests_ignore/tra.output.csv",
    "content": "id,start_chrom,start,end_chrom,end,ref,alt,length,brackets,type_inferred\ntra_a,2,321682,13,123456,T,]13:123456]T,0,]]N,TRA\ntra_b,2,321682,13,123456,N,]13:123456]N,0,]]N,TRA\n"
  },
  {
    "path": "tests/AnnotSV/test_34_bracketedToAngularNotations/Rodrigo_tests_ignore/tra.vcf",
    "content": "##fileformat=VCFv4.1\n##contig=<ID=1,length=249250621>\n##contig=<ID=2,length=243199373>\n##contig=<ID=3,length=198022430>\n##contig=<ID=4,length=191154276>\n##contig=<ID=5,length=180915260>\n##contig=<ID=6,length=171115067>\n##contig=<ID=7,length=159138663>\n##contig=<ID=8,length=146364022>\n##contig=<ID=9,length=141213431>\n##contig=<ID=10,length=135534747>\n##contig=<ID=11,length=135006516>\n##contig=<ID=12,length=133851895>\n##contig=<ID=13,length=115169878>\n##contig=<ID=14,length=107349540>\n##contig=<ID=15,length=102531392>\n##contig=<ID=16,length=90354753>\n##contig=<ID=17,length=81195210>\n##contig=<ID=18,length=78077248>\n##contig=<ID=19,length=59128983>\n##contig=<ID=20,length=63025520>\n##contig=<ID=21,length=48129895>\n##contig=<ID=22,length=51304566>\n##contig=<ID=X,length=155270560>\n##contig=<ID=Y,length=59373566>\n##FORMAT=<ID=GT,Number=1,Type=String,Description=\"Genotype\">\n##FORMAT=<ID=AD,Number=R,Type=Integer,Description=\"Allelic depths for the ref and alt alleles in the order listed\">\n##INFO=<ID=SVLEN,Number=1,Type=Integer,Description=\"Length of the SV\">\n##INFO=<ID=SVTYPE,Number=1,Type=String,Description=\"Type of the SV\">\n##INFO=<ID=SUPP_SEQ,Number=.,Type=String,Description=\"Vector of supporting technologies\">\n##INFO=<ID=SUPP_VAL,Number=.,Type=String,Description=\"Vector of supporting technologies\">\n##INFO=<ID=GENE,Number=.,Type=String,Description=\"Gene(s) overlap in breakpoint\">\n##INFO=<ID=CLUSTER,Number=.,Type=String,Description=\"IDs of other clustered breakpoints\">\n##INFO=<ID=EXTRA,Number=.,Type=String,Description=\"Extra info for testing\">\n##INFO=<ID=END,Number=1,Type=Integer,Description=\"End position of the variant described in this record\">\n#CHROM\tPOS\tID\tREF\tALT\tQUAL\tFILTER\tINFO\tFORMAT\tNORMAL\tTUMOR\n2\t321682\ttra_a\tT\t]13:123456]T\t.\tPASS\tSVTYPE=BND;EXTRA=DUP_PAIRED;MATEID=breakend_dup_b\tGT\t0/0\t0/1\n13\t123456\ttra_b\tC\tC[2:321682[\t.\tPASS\tSVTYPE=BND;EXTRA=DUP_PAIRED;MATEID=breakend_dup_a\tGT\t0/0\t0/1\n"
  },
  {
    "path": "tests/AnnotSV/test_34_bracketedToAngularNotations/command_Tcl.sh",
    "content": "#!/bin/bash -x\n\nset -eo pipefail\n\n###################################################################\n####                                                           ####\n#### Compare square/angle-bracketed notations and BED notation ####\n####                                                           ####\n###################################################################\n\nmkdir -p ./output\nrm -f ./output/command_*.annotated.tsv\nrm -f ./output/command_*.unannotated.tsv\n\n\ncut=\"$ANNOTSV/tests/AnnotSV/scripts/cutWithColumnNames.tcl\"\n\n\n# command_1: del_1\n##################\n\n$ANNOTSV/bin/AnnotSV -SVinputFile \"./input/input-square-bracketed-del_1.vcf\" -outputFile \"./output/command_1_square-bracketed-del_1.annotated.tsv\"\n$ANNOTSV/bin/AnnotSV -SVinputFile \"./input/input-angle-bracketed-del_1.vcf\" -outputFile \"./output/command_1_angle-bracketed-del_1.annotated.tsv\"\n$ANNOTSV/bin/AnnotSV -SVinputFile \"./input/input-del_1.bed\" -svtBEDcol 5 -outputFile \"./output/command_1_BED-del_1.annotated.tsv\"\n\n# tail -2 ./input/input-square-bracketed-del_1.vcf\n# 12      3000    breakend_del_1_a        T       T[12:5000[      .       PASS    SVTYPE=BND;EXTRA=DEL_PAIRED;MATEID=breakend_del_1_b     GT      0/0     0/1\n# 12      5000    breakend_del_1_b        T       ]12:3000]T      .       PASS    SVTYPE=BND;EXTRA=DEL_PAIRED;MATEID=breakend_del_1_a     GT      0/0     0/1\n \n# tail -1 ./input/input-angle-bracketed-del_1.vcf\n# 12      3000    breakend_del_1_a        T       <DEL>   .       PASS    END=5000;EXTRA=DEL_PAIRED;MATEID=breakend_del_1_b       GT      0/0     0/1\n\n# tail -1 ./input/input-del_1.bed\n# 12      2999    5000    breakend_del_1_a        DEL\n\n# gr breakend_del_1_ Rodrigo_tests_ignore/output.csv\n# breakend_del_1_a,12,3000,12,5000,T,T[12:5000[,2000,N[,DEL\n\nsquareResult=`$cut \"./output/command_1_square-bracketed-del_1.annotated.tsv\" \"AnnotSV_ID;ID;SV_chrom;SV_start;SV_end;SV_type;REF;ALT;ACMG_class\" | tail -1 | awk 'BEGIN{ORS=\" \"; OFS=\" \"} { print $1, $2, $3, $4, $5, $6, $7, $8, $9}'`\nif [ \"$squareResult\" != \"12_3000_5000_DEL_1 breakend_del_1_a 12 3000 5000 DEL T T[12:5000[ 3 \" ]\nthen\n        echo \"error 1: Error with command_1 (square bad values)\"\n        exit 1\nfi\n\necho \"Command_1 (square) OK\"\n\nangleResult=`$cut \"./output/command_1_angle-bracketed-del_1.annotated.tsv\" \"AnnotSV_ID;ID;SV_chrom;SV_start;SV_end;SV_type;REF;ALT;ACMG_class\" | tail -1 | awk 'BEGIN{ORS=\" \"; OFS=\" \"} { print $1, $2, $3, $4, $5, $6, $7, $8, $9}'`\nif [ \"$angleResult\" != \"12_3000_5000_DEL_1 breakend_del_1_a 12 3000 5000 DEL T <DEL> 3 \" ]\nthen\n        echo \"error 1: Error with command_1 (angle bad values)\"\n        exit 1\nfi\n\necho \"Command_1 (angle) OK\"\n\nBEDresult=`$cut \"./output/command_1_BED-del_1.annotated.tsv\" \"AnnotSV_ID;SV_chrom;SV_start;SV_end;SV_type;ACMG_class\" | tail -1 | awk 'BEGIN{ORS=\" \"; OFS=\" \"} { print $1, $2, $3, $4, $5, $6}'`\nif [ \"$BEDresult\" != \"12_3000_5000_DEL_1 12 3000 5000 DEL 3 \" ]\nthen\n        echo \"error 1: Error with command_1 (BED bad values)\"\n        exit 1\nfi\n\necho \"Command_1 (BED) OK\"\n\n\n\n# command_2: del_partial_pass (unordered)\n#########################################\n\n$ANNOTSV/bin/AnnotSV -SVinputFile \"input/input-square-bracketed-del_partial_pass.vcf\" -outputFile \"./output/command_2_square-bracketed-del_partial_pass.annotated.tsv\"\n$ANNOTSV/bin/AnnotSV -SVinputFile \"input/input-angle-bracketed-del_partial_pass.vcf\" -outputFile \"./output/command_2_angle-bracketed-del_partial_pass.annotated.tsv\"\n$ANNOTSV/bin/AnnotSV -SVinputFile \"input/input-del_partial_pass.bed\" -svtBEDcol 5 -outputFile \"./output/command_2_BED-del_partial_pass.annotated.tsv\"\n\n# tail -2 ./input/input-square-bracketed-del_partial_pass.vcf\n# 15      5000    breakend_del_partial_pass_a     T       ]15:3000]T      .       FAIL    SVTYPE=BND;EXTRA=DEL_PAIRED_PARTIAL_PASS;MATEID=breakend_del_partial_pass_b     GT      0/0     0/1\n# 15      3000    breakend_del_partial_pass_b     T       T[15:5000[      .       PASS    SVTYPE=BND;EXTRA=DEL_PAIRED_PARTIAL_PASS;MATEID=breakend_del_partial_pass_a     GT      0/0     0/1\n\n# tail -1 ./input/input-angle-bracketed-del_partial_pass.vcf\n# 15      3000    breakend_del_partial_pass_b     T       <DEL>   .       PASS    EXTRA=DEL_PAIRED_PARTIAL_PASS;MATEID=breakend_del_partial_pass_a;END=5000       GT      0/0     0/1\n\n# tail -1 ./input/input-del_partial_pass.bed\n# 15      2999    5000    breakend_del_partial_pass_b     DEL\n\n# gr breakend_del_partial_pass_ Rodrigo_tests_ignore/output.csv\n# breakend_del_partial_pass_b,15,3000,15,5000,T,T[15:5000[,2000,N[,DEL\n\nsquareResult=`$cut \"./output/command_2_square-bracketed-del_partial_pass.annotated.tsv\" \"AnnotSV_ID;ID;SV_chrom;SV_start;SV_end;SV_type;REF;ALT;ACMG_class\" | tail -1 | awk 'BEGIN{ORS=\" \"; OFS=\" \"} { print $1, $2, $3, $4, $5, $6, $7, $8, $9}'`\nif [ \"$squareResult\" != \"15_3000_5000_DEL_1 breakend_del_partial_pass_b 15 3000 5000 DEL T T[15:5000[ 3 \" ]\nthen\n        echo \"error 1: Error with command_2 (square bad values)\"\n        exit 1\nfi\n\necho \"Command_2 (square) OK\"\n\nangleResult=`$cut \"./output/command_2_angle-bracketed-del_partial_pass.annotated.tsv\" \"AnnotSV_ID;ID;SV_chrom;SV_start;SV_end;SV_type;REF;ALT;ACMG_class\" | tail -1 | awk 'BEGIN{ORS=\" \"; OFS=\" \"} { print $1, $2, $3, $4, $5, $6, $7, $8, $9}'`\nif [ \"$angleResult\" != \"15_3000_5000_DEL_1 breakend_del_partial_pass_b 15 3000 5000 DEL T <DEL> 3 \" ]\nthen\n        echo \"error 1: Error with command_2 (angle bad values)\"\n        exit 1\nfi\n\necho \"Command_2 (angle) OK\"\n\nBEDresult=`$cut \"./output/command_2_BED-del_partial_pass.annotated.tsv\" \"AnnotSV_ID;SV_chrom;SV_start;SV_end;SV_type;ACMG_class\" | tail -1 | awk 'BEGIN{ORS=\" \"; OFS=\" \"} { print $1, $2, $3, $4, $5, $6}'`\nif [ \"$BEDresult\" != \"15_3000_5000_DEL_1 15 3000 5000 DEL 3 \" ]\nthen\n        echo \"error 1: Error with command_2 (BED bad values)\"\n        exit 1\nfi\n\necho \"Command_2 (BED) OK\"\n\n\n\n# command_3: Square-bracketed del_unordered\n###########################################\n\n$ANNOTSV/bin/AnnotSV -SVinputFile \"./input/input-square-bracketed-del_unordered.vcf\" -outputFile \"./output/command_3_square-bracketed-del_unordered.annotated.tsv\"\n\n# tail -2 ./input/input-square-bracketed-del_unordered.vcf\n# 22      5000    breakend_del_unordered_b        T       ]22:3000]T      .       PASS    SVTYPE=BND;EXTRA=DEL_PAIRED;MATEID=breakend_del_unordered_a     GT      0/0     0/1\n# 22      3000    breakend_del_unordered_a        T       T[22:5000[      .       PASS    SVTYPE=BND;EXTRA=DEL_PAIRED;MATEID=breakend_del_unordered_b     GT      0/0     0/1\n\n# gr breakend_del_unordered_ Rodrigo_tests_ignore/output.csv\n# breakend_del_unordered_a,22,3000,22,5000,T,T[22:5000[,2000,N[,DEL\n\n\nsquareResult=`$cut \"./output/command_3_square-bracketed-del_unordered.annotated.tsv\" \"AnnotSV_ID;ID;SV_chrom;SV_start;SV_end;SV_type;REF;ALT;ACMG_class\" | tail -1 | awk 'BEGIN{ORS=\" \"; OFS=\" \"} { print $1, $2, $3, $4, $5, $6, $7, $8, $9}'`\nif [ \"$squareResult\" != \"22_3000_5000_DEL_1 breakend_del_unordered_a 22 3000 5000 DEL T T[22:5000[ 3 \" ]\nthen\n        echo \"error 1: Error with command_3 (square bad values)\"\n        exit 1\nfi\n\necho \"Command_3 (square) OK\"\n\n\n\n# command_4: dup \n################\n\n$ANNOTSV/bin/AnnotSV -SVinputFile \"./input/input-square-bracketed-dup.vcf\" -outputFile \"./output/command_4_square-bracketed-dup.annotated.tsv\"\n$ANNOTSV/bin/AnnotSV -SVinputFile \"./input/input-angle-bracketed-dup.vcf\" -outputFile \"./output/command_4_angle-bracketed-dup.annotated.tsv\"\n$ANNOTSV/bin/AnnotSV -SVinputFile \"./input/input-dup.bed\" -svtBEDcol 5 -outputFile \"./output/command_4_BED-dup.annotated.tsv\"\n\n# tail -2 ./input/input-square-bracketed-dup.vcf\n# 2       3000    breakend_dup_a  T       ]2:5000]T       .       PASS    SVTYPE=BND;EXTRA=DUP_PAIRED;MATEID=breakend_dup_b       GT      0/0     0/1\n# 2       5000    breakend_dup_b  T       T[2:3000[       .       PASS    SVTYPE=BND;EXTRA=DUP_PAIRED;MATEID=breakend_dup_a       GT      0/0     0/1\n\n# tail -1 ./input/input-angle-bracketed-dup.vcf\n# 2       3000    breakend_dup_a  T       <DUP>   .       PASS    END=5000EXTRA=DUP_PAIRED;MATEID=breakend_dup_b  GT      0/0     0/1\n\n# tail -1 ./input/input-dup.bed\n# 2       2999    5000    breakend_dup_a  DUP\n\n# gr breakend_dup_ Rodrigo_tests_ignore/output.csv\n# breakend_dup_a,2,3000,2,5000,T,]2:5000]T,2000,]N,DUP\n\nsquareResult=`$cut \"./output/command_4_square-bracketed-dup.annotated.tsv\" \"AnnotSV_ID;ID;SV_chrom;SV_start;SV_end;SV_type;REF;ALT;ACMG_class\" | tail -1 | awk 'BEGIN{ORS=\" \"; OFS=\" \"} { print $1, $2, $3, $4, $5, $6, $7, $8, $9}'`\nif [ \"$squareResult\" != \"2_3000_5000_DUP_1 breakend_dup_a 2 3000 5000 DUP T ]2:5000]T 3 \" ]\nthen\n        echo \"error 1: Error with command_4 (square bad values)\"\n        exit 1\nfi\n\necho \"Command_4 (square) OK\"\n\nangleResult=`$cut \"./output/command_4_angle-bracketed-dup.annotated.tsv\" \"AnnotSV_ID;ID;SV_chrom;SV_start;SV_end;SV_type;REF;ALT;ACMG_class\" | tail -1 | awk 'BEGIN{ORS=\" \"; OFS=\" \"} { print $1, $2, $3, $4, $5, $6, $7, $8, $9}'`\nif [ \"$angleResult\" != \"2_3000_5000_DUP_1 breakend_dup_a 2 3000 5000 DUP T <DUP> 3 \" ]\nthen\n        echo \"error 1: Error with command_4 (angle bad values)\"\n        exit 1\nfi\n\necho \"Command_4 (angle) OK\"\n\nBEDresult=`$cut \"./output/command_4_BED-dup.annotated.tsv\" \"AnnotSV_ID;SV_chrom;SV_start;SV_end;SV_type;ACMG_class\" | tail -1 | awk 'BEGIN{ORS=\" \"; OFS=\" \"} { print $1, $2, $3, $4, $5, $6}'`\nif [ \"$BEDresult\" != \"2_3000_5000_DUP_1 2 3000 5000 DUP 3 \" ]\nthen\n        echo \"error 1: Error with command_4 (BED bad values)\"\n        exit 1\nfi\n\necho \"Command_4 (BED) OK\"\n\n\n\n# command_5: empty_del\n#            => the T that is in 53040041 is changed to T[15:53040042[. The T is removed, but added back later.\n######################\n\n$ANNOTSV/bin/AnnotSV -SVinputFile \"./input/input-square-bracketed-empty_del.vcf\" -outputFile \"./output/command_5_square-bracketed-empty_del.annotated.tsv\"\n$ANNOTSV/bin/AnnotSV -SVinputFile \"./input/input-angle-bracketed-empty_del.vcf\" -outputFile \"./output/command_5_angle-bracketed-empty_del.annotated.tsv\"\n$ANNOTSV/bin/AnnotSV -SVinputFile \"./input/input-empty_del.bed\" -svtBEDcol 5 -outputFile \"./output/command_5_BED-empty_del.annotated.tsv\"\n\n# tail -2 input-square-bracketed-empty_del.vcf\n# 15      53040041        empty_del_a     T       T[15:53040042[  .       PASS    SVTYPE=BND;EXTRA=DEL_NO_SIZE;MATEID=empty_del_b GT      0/0     0/1\n# 15      53040042        empty_del_b     A       ]15:53040041]A  .       PASS    SVTYPE=BND;EXTRA=DEL_NO_SIZE;MATEID=empty_del_a GT      0/0     0/1\n\n# tail -1 input-angle-bracketed-empty_del.vcf\n# 15      53040041        empty_del_a     T       <DEL>   .       PASS    END=53040042;EXTRA=DEL_NO_SIZE;MATEID=empty_del_b       GT      0/0     0/1\n\n# tail -1 ./input/input-empty_del.bed\n# 15      53040040        53040042        empty_del_a     DEL\n\n# gr empty_del_ Rodrigo_tests_ignore/output.csv\n# -> empty because SVLEN < 50\n# \"No SV to annotate in the SVinputFile - Exit without error.\"\n\n\n# cat ./output/command_5_square-bracketed-empty_del.unannotated.tsv\n# 5_53040041_53040042_DEL_T_T[15:53040042[: variantLength (1) < SVminSize (50) (line 2)\n# 15_53040041_53040042_DEL_N_A[15:53040042[: variantLength (1) < SVminSize (50) (line 3)\nif [ `grep -c \"variantLength (1) < SVminSize (50)\" ./output/command_5_square-bracketed-empty_del.unannotated.tsv` != 2 ]\nthen\n        echo \"error 1: Error with command_5 (square bad values)\"\n        exit 1\nfi\necho \"Command_5 (square) OK\"\n\n# cat ./output/command_5_angle-bracketed-empty_del.unannotated.tsv\n# 15_53040041_53040042_DEL_T_<DEL>: variantLength (1) < SVminSize (50) (line 2)\nif [ `grep -c \"variantLength (1) < SVminSize (50)\" ./output/command_5_angle-bracketed-empty_del.unannotated.tsv` != 1 ]\nthen\n        echo \"error 1: Error with command_5 (angle bad values)\"\n        exit 1\nfi\necho \"Command_5 (angle) OK\"\n\n# WARNING: No filtering on the SV min size (min > 50 bp) from a BED input file\nBEDresult=`$cut \"./output/command_5_BED-empty_del.annotated.tsv\" \"AnnotSV_ID;SV_chrom;SV_start;SV_end;SV_type;ACMG_class\" | tail -1 | awk 'BEGIN{ORS=\" \"; OFS=\" \"} { print $1, $2, $3, $4, $5, $6}'`\nif [ \"$BEDresult\" != \"15_53040041_53040042_DEL_1 15 53040041 53040042 DEL full=3 \" ]\nthen\n        echo \"error 1: Error with command_5 (BED bad values)\"\n        exit 1\nfi\n\necho \"Command_5 (BED) OK\"\n\n\n\n# command_6: ins_by_gridss\n##########################\n\n$ANNOTSV/bin/AnnotSV -SVinputFile \"./input/input-square-bracketed-ins_by_gridss.vcf\" -SVminSize 1 -outputFile \"./output/command_6_square-bracketed-ins_by_gridss.annotated.tsv\"\n$ANNOTSV/bin/AnnotSV -SVinputFile \"./input/input-angle-bracketed-ins_by_gridss.vcf\" -outputFile \"./output/command_6_angle-bracketed-ins_by_gridss.annotated.tsv\"\n$ANNOTSV/bin/AnnotSV -SVinputFile \"./input/input-ins_by_gridss.bed\" -svtBEDcol 5 -outputFile \"./output/command_6_BED-ins_by_gridss.annotated.tsv\"\n\n# tail -2 ./input/input-square-bracketed-ins_by_gridss.vcf\n# 13      53040041        ins_by_gridss   T       TATATATATACACAC[13:53040042[    .       PASS    SVTYPE=BND;EXTRA=DEL_INS_FROM_GRIDSS    GT      0/0     0/1\n# 13      53040042        ins_by_gridss   A       ]13:53040041]ATATATATACACACA    .       PASS    SVTYPE=BND;EXTRA=DEL_INS_FROM_GRIDSS    GT      0/0     0/1\n\n# tail -1 ./input/input-angle-bracketed-ins_by_gridss.vcf\n# 13      53040041        ins_by_gridss   T       <INS>   .       PASS    EXTRA=DEL_INS_FROM_GRIDSS       GT      0/0     0/1\n\n# tail -1 ./input/input-ins_by_gridss.bed\n# 13      53040040        53040041        ns_by_gridss    INS     ATATATATACACAC\n\n# gr ins_by_gridss Rodrigo_tests_ignore/output.csv\n# ins_by_gridss,13,53040041,13,53040041,T,TATATATATACACAC,14,,INS\n\n\nsquareResult=`$cut \"./output/command_6_square-bracketed-ins_by_gridss.annotated.tsv\" \"AnnotSV_ID;ID;SV_chrom;SV_start;SV_end;SV_type;REF;ALT;ACMG_class\" | grep -v \"full=\" | tail -1 | awk 'BEGIN{ORS=\" \"; OFS=\" \"} { print $1, $2, $3, $4, $5, $6, $7, $8, $9}'`\nif [ \"$squareResult\" != \"13_53040041_53040041_INS_1 ins_by_gridss 13 53040041 53040041 INS T TATATATATACACAC[13:53040042[ NA \" ]\nthen\n        echo \"error 1: Error with command_6 (square bad values)\"\n        exit 1\nfi\n\necho \"Command_6 (square) OK\"\n\nangleResult=`$cut \"./output/command_6_angle-bracketed-ins_by_gridss.annotated.tsv\" \"AnnotSV_ID;ID;SV_chrom;SV_start;SV_end;SV_type;REF;ALT;ACMG_class\" | grep -v \"full=\" | tail -1 | awk 'BEGIN{ORS=\" \"; OFS=\" \"} { print $1, $2, $3, $4, $5, $6, $7, $8, $9}'`\nif [ \"$angleResult\" != \"13_53040041_53040041_INS_1 ins_by_gridss 13 53040041 53040041 INS T <INS> NA \" ]\nthen\n        echo \"error 1: Error with command_6 (angle bad values)\"\n        exit 1\nfi\n\necho \"Command_6 (angle) OK\"\n\nBEDresult=`$cut \"./output/command_6_BED-ins_by_gridss.annotated.tsv\" \"AnnotSV_ID;SV_chrom;SV_start;SV_end;SV_type;ACMG_class\" | grep -v \"full=\" | tail -1 | awk 'BEGIN{ORS=\" \"; OFS=\" \"} { print $1, $2, $3, $4, $5, $6}'`\nif [ \"$BEDresult\" != \"13_53040041_53040041_INS_1 13 53040041 53040041 INS NA \" ]\nthen\n        echo \"error 1: Error with command_6 (BED bad values)\"\n        exit 1\nfi\n\necho \"Command_6 (BED) OK\"\n\n\n\n# command_7: dup\n################\n\n$ANNOTSV/bin/AnnotSV -SVinputFile \"./input/input-square-bracketed-dup.vcf\" -outputFile \"./output/command_4_square-bracketed-dup.annotated.tsv\"\n$ANNOTSV/bin/AnnotSV -SVinputFile \"./input/input-angle-bracketed-dup.vcf\" -outputFile \"./output/command_4_angle-bracketed-dup.annotated.tsv\"\n$ANNOTSV/bin/AnnotSV -SVinputFile \"./input/input-dup.bed\" -svtBEDcol 5 -outputFile \"./output/command_4_BED-dup.annotated.tsv\"\n\n# tail -2 ./input/input-square-bracketed-dup.vcf\n# 2       3000    breakend_dup_a  T       ]2:5000]T       .       PASS    SVTYPE=BND;EXTRA=DUP_PAIRED;MATEID=breakend_dup_b       GT      0/0     0/1\n# 2       5000    breakend_dup_b  T       T[2:3000[       .       PASS    SVTYPE=BND;EXTRA=DUP_PAIRED;MATEID=breakend_dup_a       GT      0/0     0/1\n\n# tail -1 ./input/input-angle-bracketed-dup.vcf\n# 2       3000    breakend_dup_a  T       <DUP>   .       PASS    END=5000EXTRA=DUP_PAIRED;MATEID=breakend_dup_b  GT      0/0     0/1\n\n# tail -1 ./input/input-dup.bed\n# 2       2999    5000    breakend_dup_a  DUP\n\n# gr breakend_dup_ Rodrigo_tests_ignore/output.csv\n# breakend_dup_a,2,3000,2,5000,T,]2:5000]T,2000,]N,DUP\n\nsquareResult=`$cut \"./output/command_4_square-bracketed-dup.annotated.tsv\" \"AnnotSV_ID;ID;SV_chrom;SV_start;SV_end;SV_type;REF;ALT;ACMG_class\" | tail -1 | awk 'BEGIN{ORS=\" \"; OFS=\" \"} { print $1, $2, $3, $4, $5, $6, $7, $8, $9}'`\nif [ \"$squareResult\" != \"2_3000_5000_DUP_1 breakend_dup_a 2 3000 5000 DUP T ]2:5000]T 3 \" ]\nthen\n        echo \"error 1: Error with command_7 (square bad values)\"\n        exit 1\nfi\n\necho \"Command_7 (square) OK\"\n\nangleResult=`$cut \"./output/command_4_angle-bracketed-dup.annotated.tsv\" \"AnnotSV_ID;ID;SV_chrom;SV_start;SV_end;SV_type;REF;ALT;ACMG_class\" | tail -1 | awk 'BEGIN{ORS=\" \"; OFS=\" \"} { print $1, $2, $3, $4, $5, $6, $7, $8, $9}'`\nif [ \"$angleResult\" != \"2_3000_5000_DUP_1 breakend_dup_a 2 3000 5000 DUP T <DUP> 3 \" ]\nthen\n        echo \"error 1: Error with command_7 (angle bad values)\"\n        exit 1\nfi\n\necho \"Command_7 (angle) OK\"\n\nBEDresult=`$cut \"./output/command_4_BED-dup.annotated.tsv\" \"AnnotSV_ID;SV_chrom;SV_start;SV_end;SV_type;ACMG_class\" | tail -1 | awk 'BEGIN{ORS=\" \"; OFS=\" \"} { print $1, $2, $3, $4, $5, $6}'`\nif [ \"$BEDresult\" != \"2_3000_5000_DUP_1 2 3000 5000 DUP 3 \" ]\nthen\n        echo \"error 1: Error with command_7 (BED bad values)\"\n        exit 1\nfi\n\necho \"Command_7 (BED) OK\"\n\n\n\n# command_8: inv1 -- T]3:5000]\n##############################\n\n$ANNOTSV/bin/AnnotSV -SVinputFile \"./input/input-square-bracketed-inv1.vcf\" -outputFile \"./output/command_8_square-bracketed-inv1.annotated.tsv\"\n$ANNOTSV/bin/AnnotSV -SVinputFile \"./input/input-angle-bracketed-inv1.vcf\" -outputFile \"./output/command_8_angle-bracketed-inv1.annotated.tsv\"\n$ANNOTSV/bin/AnnotSV -SVinputFile \"./input/input-inv1.bed\" -svtBEDcol 5 -outputFile \"./output/command_8_BED-inv1.annotated.tsv\"\n\n# tail -2 ./input/input-square-bracketed-inv1.vcf\n# 3       2999    breakend_inv_1_a        T       T]3:5000]       .       PASS    SVTYPE=BND;EXTRA=INV_PAIRED;MATEID=breakend_inv_1_b     GT      0/0     0/1\n# 3       5000    breakend_inv_1_b        T       [3:2999[T       .       PASS    SVTYPE=BND;EXTRA=INV_PAIRED;MATEID=breakend_inv_1_a     GT      0/0     0/1\n\n# tail -1 ./input/input-angle-bracketed-inv1.vcf\n# 3       2999    breakend_inv_1_a        T       <INV>   .       PASS    END=5000;EXTRA=INV_PAIRED;MATEID=breakend_inv_1_b       GT      0/0     0/1\n\n# tail -1 ./input/input-inv1.bed\n# 3       2998    5000    breakend_inv_1_a        INV\n\n# gr breakend_inv_1 Rodrigo_tests_ignore/output.csv\n# breakend_inv_1_a,3,2999,3,5000,T,T]3:5000],2001,N],INV\n\nsquareResult=`$cut \"./output/command_8_square-bracketed-inv1.annotated.tsv\" \"AnnotSV_ID;ID;SV_chrom;SV_start;SV_end;SV_type;REF;ALT;ACMG_class\" | tail -1 | awk 'BEGIN{ORS=\" \"; OFS=\" \"} { print $1, $2, $3, $4, $5, $6, $7, $8, $9}'`\nif [ \"$squareResult\" != \"3_2999_5000_INV_1 breakend_inv_1_a 3 2999 5000 INV T T]3:5000] NA \" ]\nthen\n        echo \"error 1: Error with command_8 (square bad values)\"\n        exit 1\nfi\n\necho \"Command_8 (square) OK\"\n\nangleResult=`$cut \"./output/command_8_angle-bracketed-inv1.annotated.tsv\" \"AnnotSV_ID;ID;SV_chrom;SV_start;SV_end;SV_type;REF;ALT;ACMG_class\" | tail -1 | awk 'BEGIN{ORS=\" \"; OFS=\" \"} { print $1, $2, $3, $4, $5, $6, $7, $8, $9}'`\nif [ \"$angleResult\" != \"3_2999_5000_INV_1 breakend_inv_1_a 3 2999 5000 INV T <INV> NA \" ]\nthen\n        echo \"error 1: Error with command_8 (angle bad values)\"\n        exit 1\nfi\n\necho \"Command_8 (angle) OK\"\n\nBEDresult=`$cut \"./output/command_8_BED-inv1.annotated.tsv\" \"AnnotSV_ID;SV_chrom;SV_start;SV_end;SV_type;ACMG_class\" | tail -1 | awk 'BEGIN{ORS=\" \"; OFS=\" \"} { print $1, $2, $3, $4, $5, $6}'`\nif [ \"$BEDresult\" != \"3_2999_5000_INV_1 3 2999 5000 INV NA \" ]\nthen\n        echo \"error 1: Error with command_8 (BED bad values)\"\n        exit 1\nfi\n\necho \"Command_8 (BED) OK\"\n\n\n\n# command_9: inv2 -- [3:5001[T\n##############################\n\n$ANNOTSV/bin/AnnotSV -SVinputFile \"./input/input-square-bracketed-inv2.vcf\" -outputFile \"./output/command_9_square-bracketed-inv2.annotated.tsv\" \n$ANNOTSV/bin/AnnotSV -SVinputFile \"./input/input-angle-bracketed-inv2.vcf\" -outputFile \"./output/command_9_angle-bracketed-inv2.annotated.tsv\"\n\n# tail -2 ./input/input-square-bracketed-inv2.vcf\n# 3       3000    breakend_inv_2_a        T       [3:5001[T       .       PASS    SVTYPE=BND;EXTRA=INV_PAIRED;MATEID=breakend_inv_2_b     GT      0/0     0/1\n# 3       5001    breakend_inv_2_b        T       T]3:3000]       .       PASS    SVTYPE=BND;EXTRA=INV_PAIRED;MATEID=breakend_inv_2_a     GT      0/0     0/1\n\n# tail -1 ./input/input-angle-bracketed-inv2.vcf\n# 3       3000    breakend_inv_2_a        T       <INV>   .       PASS    END=5001;EXTRA=INV_PAIRED;MATEID=breakend_inv_2_b       GT      0/0     0/1\n\n# gr breakend_inv_2 Rodrigo_tests_ignore/output.csv\n# breakend_inv_2_a,3,3000,3,5001,T,[3:5001[T,2001,[N,INV\n\n\nsquareResult=`$cut \"./output/command_9_square-bracketed-inv2.annotated.tsv\" \"AnnotSV_ID;ID;SV_chrom;SV_start;SV_end;SV_type;REF;ALT;ACMG_class\" | tail -1 | awk 'BEGIN{ORS=\" \"; OFS=\" \"} { print $1, $2, $3, $4, $5, $6, $7, $8, $9}'`\nif [ \"$squareResult\" != \"3_3000_5001_INV_1 breakend_inv_2_a 3 3000 5001 INV T [3:5001[T NA \" ]\nthen\n        echo \"error 1: Error with command_9 (square bad values)\"\n        exit 1\nfi\n\necho \"Command_9 (square) OK\"\n\nangleResult=`$cut \"./output/command_9_angle-bracketed-inv2.annotated.tsv\" \"AnnotSV_ID;ID;SV_chrom;SV_start;SV_end;SV_type;REF;ALT;ACMG_class\" | tail -1 | awk 'BEGIN{ORS=\" \"; OFS=\" \"} { print $1, $2, $3, $4, $5, $6, $7, $8, $9}'`\nif [ \"$angleResult\" != \"3_3000_5001_INV_1 breakend_inv_2_a 3 3000 5001 INV T <INV> NA \" ]\nthen\n        echo \"error 1: Error with command_9 (angle bad values)\"\n        exit 1\nfi\n\necho \"Command_9 (angle) OK\"\n\n\n\n# command_10: inv3 (unordered)\n#             (we should have a single INV in the output (not 2))\n#################################################################\n\n$ANNOTSV/bin/AnnotSV -SVinputFile \"./input/input-square-bracketed-inv3.vcf\" -outputFile \"./output/command_10_square-bracketed-inv3.annotated.tsv\"\n\n# tail -2 ./input/input-square-bracketed-inv3.vcf\n# 1       9135238 10_2    G       G]1:7852191]    .       PASS    SVTYPE=BND;MATEID=10_1;SVCLASS=inversion        RC:PS   0:0     10:10\n# 1       7852191 10_1    A       A]1:9135238]    .       PASS    SVTYPE=BND;MATEID=10_2;SVCLASS=inversion        RC:PS   0:0     10:10\n\nsquareResult=`$cut \"./output/command_10_square-bracketed-inv3.annotated.tsv\" \"AnnotSV_ID;ID;SV_chrom;SV_start;SV_end;SV_type;REF;ALT;ACMG_class\" | grep -v \"full=\" | tail -1 | awk 'BEGIN{ORS=\" \"; OFS=\" \"} { print $1, $2, $3, $4, $5, $6, $7, $8, $9}'`\nif [ \"$squareResult\" != \"1_7852191_9135238_INV_1 10_1 1 7852191 9135238 INV A A]1:9135238] NA \" ]\nthen\n        echo \"error 1: Error with command_10 (square bad values)\"\n        exit 1\nfi\n\necho \"Command_10 (square) OK\"\n\n\n\n# command_11: tra1\n#################################################################\n\n$ANNOTSV/bin/AnnotSV -SVinputFile \"./input/input-square-bracketed-tra1.vcf\" -outputFile \"./output/command_11_square-bracketed-tra1.annotated.tsv\" \n$ANNOTSV/bin/AnnotSV -SVinputFile \"./input/input-angle-bracketed-tra1.vcf\" -outputFile \"./output/command_11_angle-bracketed-tra1.annotated.tsv\"\n$ANNOTSV/bin/AnnotSV -SVinputFile \"./input/input-tra1.bed\" -svtBEDcol 5 -outputFile \"./output/command_11_BED-tra1.annotated.tsv\"\n\n# tail -2 ./input/input-square-bracketed-tra1.vcf\n# 2       321682  tra_a   T       ]13:123456]T    .       PASS    SVTYPE=BND      GT      0/0     0/1\n# 13      123456  tra_b   C       C[2:321682[     .       PASS    SVTYPE=BND      GT      0/0     0/1\n\n# tail -2 ./input/input-angle-bracketed-tra1.vcf\n# 2       321682  tra_a   T       <TRA>   .       PASS    SVTYPE=BND;CHR2=13;END=123456   GT      0/0     0/1\n# 13      123456  tra_b   C       <TRA>   .       PASS    SVTYPE=BND;CHR2=2;END=321682    GT      0/0     0/1\n\n# tail -2 ./input/input-tra1.bed\n# 2       321681  321682  tra_a   TRA\n# 13      123455  123456  tra_b   TRA\n\n# gr \"tra_\" Rodrigo_tests_ignore/output.csv\n# tra_a,2,321682,13,123456,T,]13:123456]T,0,]]N,TRA\n# tra_b,2,321682,13,123456,N,]13:123456]N,0,]]N,TRA\n\n\n\nsquareResult=`$cut \"./output/command_11_square-bracketed-tra1.annotated.tsv\" \"AnnotSV_ID;ID;SV_type;REF;ALT;ACMG_class\" | grep -v \"full=\" | tail -2 | awk 'BEGIN{ORS=\" \"; OFS=\" \"} { print $1, $2, $3, $4, $5, $6}'`\nif [ \"$squareResult\" != \"13_123456_123456_TRA_1 tra_b TRA C C[2:321682[ NA 2_321682_321682_TRA_1 tra_a TRA T ]13:123456]T NA \" ]\nthen\n        echo \"error 1: Error with command_11 (square bad values)\"\n        exit 1\nfi\necho \"Command_11 (square) OK\"\n\nangleResult=`$cut \"./output/command_11_angle-bracketed-tra1.annotated.tsv\" \"AnnotSV_ID;ID;SV_type;REF;ALT;ACMG_class\" | grep -v \"full=\" | tail -2 | awk 'BEGIN{ORS=\" \"; OFS=\" \"} { print $1, $2, $3, $4, $5, $6}'`\nif [ \"$angleResult\" != \"13_123456_123456_TRA_1 tra_b TRA C <TRA>_2_123456 NA 2_321682_321682_TRA_1 tra_a TRA T <TRA>_13_321682 NA \" ]\nthen\n        echo \"error 1: Error with command_11 (angle bad values)\"\n        exit 1\nfi\necho \"Command_11 (angle) OK\"\n\nBEDresult=`$cut \"./output/command_11_BED-tra1.annotated.tsv\" \"AnnotSV_ID;SV_type;ACMG_class\" | grep -v \"full=\" | tail -2 | awk 'BEGIN{ORS=\" \"; OFS=\" \"} { print $1, $2, $3}'`\nif [ \"$BEDresult\" != \"13_123456_123456_TRA_1 TRA NA 2_321682_321682_TRA_1 TRA NA \" ]\nthen\n        echo \"error 1: Error with command_11 (BED bad values)\"\n        exit 1\nfi\necho \"Command_11 (BED) OK\"\n\n\n\n# command_12: tra2 (no_mateid)\n##############################\n\n$ANNOTSV/bin/AnnotSV -SVinputFile \"./input/input-square-bracketed-tra2.vcf\" -outputFile \"./output/command_12_square-bracketed-tra2.annotated.tsv\"\n$ANNOTSV/bin/AnnotSV -SVinputFile \"./input/input-angle-bracketed-tra2.vcf\" -outputFile \"./output/command_12_angle-bracketed-tra2.annotated.tsv\"\n\n# tail -2 ./input/input-square-bracketed-tra2.vcf\n# 17      198982  trn_no_mateid_a A       A]2:321681]     .       PASS    SVTYPE=BND;EXTRA=TRN_PAIRED_WITHOUT_MATE_ID     GT      0/0     0/1\n# 2       321681  trn_no_mateid_b G       G]17:198982]    .       PASS    SVTYPE=BND;EXTRA=TRN_PAIRED_WITHOUT_MATE_ID     GT      0/0     0/1\n\n# tail -2 ./input/input-angle-bracketed-tra2.vcf\n# 17      198982  trn_no_mateid_a A       <TRA>   .       PASS    SVTYPE=BND;EXTRA=TRN_PAIRED_WITHOUT_MATE_ID     GT      0/0     0/1\n# 2       321681  trn_no_mateid_b G       <TRA>   .       PASS    SVTYPE=BND;EXTRA=TRN_PAIRED_WITHOUT_MATE_ID     GT      0/0     0/1\n\n# gr trn_no_mateid Rodrigo_tests_ignore/output.csv\n# trn_no_mateid_b,2,321681,17,198982,G,G]17:198982],0,N]],TRN\n\nsquareResult=`$cut \"./output/command_12_square-bracketed-tra2.annotated.tsv\" \"AnnotSV_ID;ID;SV_type;REF;ALT;ACMG_class\" | grep -v \"full=\" | tail -2 | awk 'BEGIN{ORS=\" \"; OFS=\" \"} { print $1, $2, $3, $4, $5, $6}'`\nif [ \"$squareResult\" != \"17_198982_198982_TRA_1 trn_no_mateid_a TRA A A]2:321681] NA 2_321681_321681_TRA_1 trn_no_mateid_b TRA G G]17:198982] NA \" ]\nthen\n        echo \"error 1: Error with command_12 (square bad values)\"\n        exit 1\nfi\necho \"Command_12 (square) OK\"\n\nangleResult=`$cut \"./output/command_12_angle-bracketed-tra2.annotated.tsv\" \"AnnotSV_ID;ID;SV_type;REF;ALT;ACMG_class\" | grep -v \"full=\" | tail -2 | awk 'BEGIN{ORS=\" \"; OFS=\" \"} { print $1, $2, $3, $4, $5, $6}'`\nif [ \"$angleResult\" != \"17_198982_198982_TRA_1 trn_no_mateid_a TRA A <TRA> NA 2_321681_321681_TRA_1 trn_no_mateid_b TRA G <TRA> NA \" ]\nthen\n        echo \"error 1: Error with command_12 (angle bad values)\"\n        exit 1\nfi\necho \"Command_12 (angle) OK\"\n\n\n\n############################################################################\n##\n## Square-bracketed notation with only 1 BND, and only the reciprocal BND\n##\n############################################################################\n\n# The \"BNDrescue\" flag is added in the INFO field (for the rescue BND) \n\n\n# command_13: OnlyTheReciprocalBND_square-bracketed-del_1\n#########################################################\n\n$ANNOTSV/bin/AnnotSV -SVinputFile \"./input/input_OnlyTheReciprocalBND_square-bracketed-del_1.vcf\" -outputFile \"./output/command_13_square-bracketed-del_1.annotated.tsv\" -includeci 0\n\n# tail -1 ./input/input_OnlyTheReciprocalBND_square-bracketed-del_1.vcf\n# 12      5000    breakend_del_1_b        T       ]12:3000]T      .       PASS    SVTYPE=BND;EXTRA=DEL_PAIRED;MATEID=breakend_del_1_a;CIPOS=-1,1;CIEND=-5,5       GT      0/0     0/1\n\nsquareResult=`$cut \"./output/command_13_square-bracketed-del_1.annotated.tsv\" \"AnnotSV_ID;ID;SV_type;REF;ALT;INFO;ACMG_class\" | grep -v \"full=\" | tail -1 | awk 'BEGIN{ORS=\" \"; OFS=\" \"} { print $1, $2, $3, $4, $5, $6, $7}'`\nif [ \"$squareResult\" != \"12_3000_5000_DEL_1 breakend_del_1_b DEL T ]12:3000]T SVTYPE=BND;EXTRA=DEL_PAIRED;MATEID=breakend_del_1_a;CIPOS=-5,5;CIEND=-1,1;BNDrescue 3 \" ]\nthen\n        echo \"error 1: Error with command_13 (OnlyTheReciprocalBND_square bad values)\"\n        exit 1\nfi\necho \"Command_13 (OnlyTheReciprocalBND_square) OK\"\n\nif [ `echo $squareResult | grep -c BNDrescue` != 1 ]\nthen\n        echo \"error 1: Error with command_13 (OnlyTheReciprocalBND_square: no \\\"BNDrescue\\\" flag)\"\n        exit 1\nfi\n\necho \"Command_13 (OnlyTheReciprocalBND_square: \\\"BNDrescue\\\" flag present) OK\"\n\n\n\n# command_14: OnlyTheReciprocalBND_square-bracketed-del_partial_pass\n####################################################################\n\n$ANNOTSV/bin/AnnotSV -SVinputFile \"./input/input_OnlyTheReciprocalBND_square-bracketed-del_partial_pass.vcf\" -outputFile \"./output/command_14_square-bracketed-del_partial_pass.annotated.tsv\"\n\n# tail -1 ./input/input_OnlyTheReciprocalBND_square-bracketed-del_partial_pass.vcf\n# 15      5000    breakend_del_partial_pass_a     T       ]15:3000]T      .       FAIL    SVTYPE=BND;EXTRA=DEL_PAIRED_PARTIAL_PASS;MATEID=breakend_del_partial_pass_b     GT      0/0     0/1\n\nsquareResult=`$cut \"./output/command_14_square-bracketed-del_partial_pass.annotated.tsv\" \"AnnotSV_ID;ID;SV_type;REF;ALT;INFO;ACMG_class\" | grep -v \"full=\" | tail -1 | awk 'BEGIN{ORS=\" \"; OFS=\" \"} { print $1, $2, $3, $4, $5, $6, $7}'`\nif [ \"$squareResult\" != \"15_3000_5000_DEL_1 breakend_del_partial_pass_a DEL T ]15:3000]T SVTYPE=BND;EXTRA=DEL_PAIRED_PARTIAL_PASS;MATEID=breakend_del_partial_pass_b;BNDrescue 3 \" ]\nthen\n        echo \"error 1: Error with command_14 (OnlyTheReciprocalBND_square bad values)\"\n        exit 1\nfi\necho \"Command_14 (OnlyTheReciprocalBND_square) OK\"\n\n\n\n# command_15: OnlyTheReciprocalBND_square-bracketed-del_unordered\n#################################################################\n\n$ANNOTSV/bin/AnnotSV -SVinputFile \"./input/input_OnlyTheReciprocalBND_square-bracketed-del_unordered.vcf\" -outputFile \"./output/command_15_square-bracketed-del_unordered.annotated.tsv\"\n\n# tail -1 ./input/input_OnlyTheReciprocalBND_square-bracketed-del_unordered.vcf\n# 22      5000    breakend_del_unordered_b        T       ]22:3000]T      .       PASS    SVTYPE=BND;EXTRA=DEL_PAIRED;MATEID=breakend_del_unordered_a     GT      0/0     0/1\n\nsquareResult=`$cut \"./output/command_15_square-bracketed-del_unordered.annotated.tsv\" \"AnnotSV_ID;ID;SV_type;REF;ALT;INFO;ACMG_class\" | grep -v \"full=\" | tail -1 | awk 'BEGIN{ORS=\" \"; OFS=\" \"} { print $1, $2, $3, $4, $5, $6, $7}'`\nif [ \"$squareResult\" != \"22_3000_5000_DEL_1 breakend_del_unordered_b DEL T ]22:3000]T SVTYPE=BND;EXTRA=DEL_PAIRED;MATEID=breakend_del_unordered_a;BNDrescue 3 \" ]\nthen\n        echo \"error 1: Error with command_15 (OnlyTheReciprocalBND_square bad values)\"\n        exit 1\nfi\necho \"Command_15 (OnlyTheReciprocalBND_square) OK\"\n\n\n\n# command_16: OnlyTheReciprocalBND_square-bracketed-dup \n#######################################################\n\n$ANNOTSV/bin/AnnotSV -SVinputFile \"./input/input_OnlyTheReciprocalBND_square-bracketed-dup.vcf\" -outputFile \"./output/command_16_square-bracketed-dup.annotated.tsv\"\n\n# tail -1 ./input/input_OnlyTheReciprocalBND_square-bracketed-dup.vcf\n# 2       5000    breakend_dup_b  T       T[2:3000[       .       PASS    SVTYPE=BND;EXTRA=DUP_PAIRED;MATEID=breakend_dup_a       GT      0/0     0/1\n\nsquareResult=`$cut \"./output/command_16_square-bracketed-dup.annotated.tsv\" \"AnnotSV_ID;ID;SV_type;REF;ALT;INFO;ACMG_class\" | grep -v \"full=\" | tail -1 | awk 'BEGIN{ORS=\" \"; OFS=\" \"} { print $1, $2, $3, $4, $5, $6, $7}'`\nif [ \"$squareResult\" != \"2_3000_5000_DUP_1 breakend_dup_b DUP T T[2:3000[ SVTYPE=BND;EXTRA=DUP_PAIRED;MATEID=breakend_dup_a;BNDrescue 3 \" ]\nthen\n        echo \"error 1: Error with command_16 (OnlyTheReciprocalBND_square bad values)\"\n        exit 1\nfi\necho \"Command_16 (OnlyTheReciprocalBND_square) OK\"\n\n\n\n# command_17: OnlyTheReciprocalBND_square-bracketed-empty_del\n#############################################################\n\n$ANNOTSV/bin/AnnotSV -SVinputFile \"./input/input_OnlyTheReciprocalBND_square-bracketed-empty_del.vcf\" -outputFile \"./output/command_17_square-bracketed-empty_del.annotated.tsv\"\n\n# tail -1 ./input/input_OnlyTheReciprocalBND_square-bracketed-empty_del.vcf\n# 15      53040042        empty_del_b     A       ]15:53040041]A  .       PASS    SVTYPE=BND;EXTRA=DEL_NO_SIZE;MATEID=empty_del_a GT      0/0     0/1\n\nif [ `grep -c \"variantLength (1) < SVminSize (50)\" ./output/command_17_square-bracketed-empty_del.unannotated.tsv` != 1 ]\nthen\n        echo \"error 1: Error with command_17 (OnlyTheReciprocalBND_square bad values)\"\n        exit 1\nfi\necho \"Command_17 (OnlyTheReciprocalBND_square) OK\"\n\n\n\n# command_18: OnlyTheReciprocalBND_square-bracketed-ins_by_gridss \n#################################################################\n\n$ANNOTSV/bin/AnnotSV -SVinputFile \"./input/input_OnlyTheReciprocalBND_square-bracketed-ins_by_gridss.vcf\" -SVminSize 1 -outputFile \"./output/command_18_square-bracketed-ins_by_gridss.annotated.tsv\"\n\n# tail -1 ./input/input_OnlyTheReciprocalBND_square-bracketed-ins_by_gridss.vcf\n# 13      53040042        ins_by_gridss   A       ]13:53040041]ATATATATACACACA    .       PASS    SVTYPE=BND;EXTRA=DEL_INS_FROM_GRIDSS    GT      0/0     0/1\n\nsquareResult=`$cut \"./output/command_18_square-bracketed-ins_by_gridss.annotated.tsv\" \"AnnotSV_ID;ID;SV_type;REF;ALT;INFO;ACMG_class\" | grep -v \"full=\" | tail -1 | awk 'BEGIN{ORS=\" \"; OFS=\" \"} { print $1, $2, $3, $4, $5, $6, $7}'`\nif [ \"$squareResult\" != \"13_53040041_53040041_INS_1 ins_by_gridss INS A ]13:53040041]ATATATATACACACA SVTYPE=BND;EXTRA=DEL_INS_FROM_GRIDSS;BNDrescue NA \" ]\nthen\n        echo \"error 1: Error with command_18 (OnlyTheReciprocalBND_square bad values)\"\n        exit 1\nfi\necho \"Command_18 (OnlyTheReciprocalBND_square) OK\"\n\n\n\n# command_19: OnlyTheReciprocalBND_square-bracketed-inv1\n########################################################\n\n$ANNOTSV/bin/AnnotSV -SVinputFile \"./input/input_OnlyTheReciprocalBND_square-bracketed-inv1.vcf\" -outputFile \"./output/command_19_square-bracketed-inv1.annotated.tsv\"\n\n# tail -1 ./input/input_OnlyTheReciprocalBND_square-bracketed-inv1.vcf\n# 3       5000    breakend_inv_1_b        T       [3:2999[T       .       PASS    SVTYPE=BND;EXTRA=INV_PAIRED;MATEID=breakend_inv_1_a     GT    0/0      0/1\n\nsquareResult=`$cut \"./output/command_19_square-bracketed-inv1.annotated.tsv\" \"AnnotSV_ID;ID;SV_type;REF;ALT;INFO;ACMG_class\" | grep -v \"full=\" | tail -1 | awk 'BEGIN{ORS=\" \"; OFS=\" \"} { print $1, $2, $3, $4, $5, $6, $7}'`\nif [ \"$squareResult\" != \"3_2999_5000_INV_1 breakend_inv_1_b INV T [3:2999[T SVTYPE=BND;EXTRA=INV_PAIRED;MATEID=breakend_inv_1_a;BNDrescue NA \" ]\nthen\n        echo \"error 1: Error with command_19 (OnlyTheReciprocalBND_square bad values)\"\n        exit 1\nfi\necho \"Command_19 (OnlyTheReciprocalBND_square) OK\"\n\n\n\n# command_20: OnlyTheReciprocalBND_square-bracketed-inv2\n########################################################\n\n$ANNOTSV/bin/AnnotSV -SVinputFile \"./input/input_OnlyTheReciprocalBND_square-bracketed-inv2.vcf\" -outputFile \"./output/command_20_square-bracketed-inv2.annotated.tsv\"\n\n# tail -1 ./input/input_OnlyTheReciprocalBND_square-bracketed-inv2.vcf\n# 3       5001    breakend_inv_2_b        T       T]3:3000]       .       PASS    SVTYPE=BND;EXTRA=INV_PAIRED;MATEID=breakend_inv_2_a     GT    0/0      0/1\n\nsquareResult=`$cut \"./output/command_20_square-bracketed-inv2.annotated.tsv\" \"AnnotSV_ID;ID;SV_type;REF;ALT;INFO;ACMG_class\" | grep -v \"full=\" | tail -1 | awk 'BEGIN{ORS=\" \"; OFS=\" \"} { print $1, $2, $3, $4, $5, $6, $7}'`\nif [ \"$squareResult\" != \"3_3000_5001_INV_1 breakend_inv_2_b INV T T]3:3000] SVTYPE=BND;EXTRA=INV_PAIRED;MATEID=breakend_inv_2_a;BNDrescue NA \" ]\nthen\n        echo \"error 1: Error with command_20 (OnlyTheReciprocalBND_square bad values)\"\n        exit 1\nfi\necho \"Command_20 (OnlyTheReciprocalBND_square) OK\"\n\n\n\n# command_21: OnlyTheReciprocalBND_square-bracketed-tra1_1\n##########################################################\n\n$ANNOTSV/bin/AnnotSV -SVinputFile \"./input/input_OnlyTheReciprocalBND_square-bracketed-tra1_1.vcf\" -outputFile \"./output/command_21_OnlyTheReciprocalBND_square-bracketed-tra1_1.annotated.tsv\"\n\n# tail -1 ./input/input_OnlyTheReciprocalBND_square-bracketed-tra1_1.vcf\n# 2       321682  tra_a   T       ]13:123456]T    .       PASS    SVTYPE=BND      GT      0/0     0/1\n\nsquareResult=`$cut \"./output/command_21_OnlyTheReciprocalBND_square-bracketed-tra1_1.annotated.tsv\" \"AnnotSV_ID;ID;SV_type;REF;ALT;INFO;ACMG_class\" | grep -v \"full=\" | tail -2 | awk 'BEGIN{ORS=\" \"; OFS=\" \"} { print $1, $2, $3, $4, $5, $6, $7}'`\nif [ \"$squareResult\" != \"13_123456_123456_TRA_1 tra_a TRA T ]13:123456]T SVTYPE=BND;BNDrescue NA 2_321682_321682_TRA_1 tra_a TRA T ]13:123456]T SVTYPE=BND NA \" ]\nthen\n        echo \"error 1: Error with command_21 (OnlyTheReciprocalBND_square bad values)\"\n        exit 1\nfi\necho \"Command_21 (OnlyTheReciprocalBND_square) OK\"\n\n\n\n# command_21: OnlyTheReciprocalBND_square-bracketed-tra1_2\n##########################################################\n\n$ANNOTSV/bin/AnnotSV -SVinputFile \"./input/input_OnlyTheReciprocalBND_square-bracketed-tra1_2.vcf\" -outputFile \"./output/input_OnlyTheReciprocalBND_square-bracketed-tra1_2.annotated.tsv\"\n\n# tail -1 ./input/input_OnlyTheReciprocalBND_square-bracketed-tra1_2.vcf\n# 13      123456  tra_b   C       C[2:321682[     .       PASS    SVTYPE=BND      GT      0/0     0/1\n\nsquareResult=`$cut \"./output/input_OnlyTheReciprocalBND_square-bracketed-tra1_2.annotated.tsv\" \"AnnotSV_ID;ID;SV_type;REF;ALT;INFO;ACMG_class\" | grep -v \"full=\" | tail -2 | awk 'BEGIN{ORS=\" \"; OFS=\" \"} { print $1, $2, $3, $4, $5, $6, $7}'`\nif [ \"$squareResult\" != \"13_123456_123456_TRA_1 tra_b TRA C C[2:321682[ SVTYPE=BND NA 2_321682_321682_TRA_1 tra_b TRA C C[2:321682[ SVTYPE=BND;BNDrescue NA \" ]\nthen\n        echo \"error 1: Error with command_21 (OnlyTheReciprocalBND_square bad values)\"\n        exit 1\nfi\necho \"Command_21 (OnlyTheReciprocalBND_square) OK\"\n\n\n\n\n################################################################\n################################################################\n################################################################\n\necho \"ok - Finished\"\n\n\n"
  },
  {
    "path": "tests/AnnotSV/test_34_bracketedToAngularNotations/input/input-angle-bracketed-del_1.vcf",
    "content": "#CHROM\tPOS\tID\tREF\tALT\tQUAL\tFILTER\tINFO\tFORMAT\tNORMAL\tTUMOR\n12\t3000\tbreakend_del_1_a\tT\t<DEL>\t.\tPASS\tEND=5000;EXTRA=DEL_PAIRED;MATEID=breakend_del_1_b\tGT\t0/0\t0/1\n"
  },
  {
    "path": "tests/AnnotSV/test_34_bracketedToAngularNotations/input/input-angle-bracketed-del_partial_pass.vcf",
    "content": "#CHROM\tPOS\tID\tREF\tALT\tQUAL\tFILTER\tINFO\tFORMAT\tNORMAL\tTUMOR\n15\t3000\tbreakend_del_partial_pass_b\tT\t<DEL>\t.\tPASS\tEXTRA=DEL_PAIRED_PARTIAL_PASS;MATEID=breakend_del_partial_pass_a;END=5000\tGT\t0/0\t0/1\n"
  },
  {
    "path": "tests/AnnotSV/test_34_bracketedToAngularNotations/input/input-angle-bracketed-dup.vcf",
    "content": "#CHROM\tPOS\tID\tREF\tALT\tQUAL\tFILTER\tINFO\tFORMAT\tNORMAL\tTUMOR\n2\t3000\tbreakend_dup_a\tT\t<DUP>\t.\tPASS\tEND=5000EXTRA=DUP_PAIRED;MATEID=breakend_dup_b\tGT\t0/0\t0/1\n"
  },
  {
    "path": "tests/AnnotSV/test_34_bracketedToAngularNotations/input/input-angle-bracketed-empty_del.vcf",
    "content": "#CHROM\tPOS\tID\tREF\tALT\tQUAL\tFILTER\tINFO\tFORMAT\tNORMAL\tTUMOR\n15\t53040041\tempty_del_a\tT\t<DEL>\t.\tPASS\tEND=53040042;EXTRA=DEL_NO_SIZE;MATEID=empty_del_b\tGT\t0/0\t0/1\n"
  },
  {
    "path": "tests/AnnotSV/test_34_bracketedToAngularNotations/input/input-angle-bracketed-ins_by_gridss.vcf",
    "content": "#CHROM\tPOS\tID\tREF\tALT\tQUAL\tFILTER\tINFO\tFORMAT\tNORMAL\tTUMOR\n13\t53040041\tins_by_gridss\tT\t<INS>\t.\tPASS\tEXTRA=DEL_INS_FROM_GRIDSS\tGT\t0/0\t0/1\n"
  },
  {
    "path": "tests/AnnotSV/test_34_bracketedToAngularNotations/input/input-angle-bracketed-inv1.vcf",
    "content": "#CHROM\tPOS\tID\tREF\tALT\tQUAL\tFILTER\tINFO\tFORMAT\tNORMAL\tTUMOR\n3\t2999\tbreakend_inv_1_a\tT\t<INV>\t.\tPASS\tEND=5000;EXTRA=INV_PAIRED;MATEID=breakend_inv_1_b\tGT\t0/0\t0/1\n"
  },
  {
    "path": "tests/AnnotSV/test_34_bracketedToAngularNotations/input/input-angle-bracketed-inv2.vcf",
    "content": "#CHROM\tPOS\tID\tREF\tALT\tQUAL\tFILTER\tINFO\tFORMAT\tNORMAL\tTUMOR\n3\t3000\tbreakend_inv_2_a\tT\t<INV>\t.\tPASS\tEND=5001;EXTRA=INV_PAIRED;MATEID=breakend_inv_2_b\tGT\t0/0\t0/1\n"
  },
  {
    "path": "tests/AnnotSV/test_34_bracketedToAngularNotations/input/input-angle-bracketed-tra1.vcf",
    "content": "#CHROM\tPOS\tID\tREF\tALT\tQUAL\tFILTER\tINFO\tFORMAT\tNORMAL\tTUMOR\n2\t321682\ttra_a\tT\t<TRA>\t.\tPASS\tSVTYPE=BND;CHR2=13;END=123456\tGT\t0/0\t0/1\n13\t123456\ttra_b\tC\t<TRA>\t.\tPASS\tSVTYPE=BND;CHR2=2;END=321682\tGT\t0/0\t0/1\n"
  },
  {
    "path": "tests/AnnotSV/test_34_bracketedToAngularNotations/input/input-angle-bracketed-tra2.vcf",
    "content": "#CHROM\tPOS\tID\tREF\tALT\tQUAL\tFILTER\tINFO\tFORMAT\tNORMAL\tTUMOR\n17\t198982\ttrn_no_mateid_a\tA\t<TRA>\t.\tPASS\tSVTYPE=BND;EXTRA=TRN_PAIRED_WITHOUT_MATE_ID\tGT\t0/0\t0/1\n2\t321681\ttrn_no_mateid_b\tG\t<TRA>\t.\tPASS\tSVTYPE=BND;EXTRA=TRN_PAIRED_WITHOUT_MATE_ID\tGT\t0/0\t0/1\n"
  },
  {
    "path": "tests/AnnotSV/test_34_bracketedToAngularNotations/input/input-del_1.bed",
    "content": "12\t2999\t5000\tbreakend_del_1_a\tDEL\n"
  },
  {
    "path": "tests/AnnotSV/test_34_bracketedToAngularNotations/input/input-del_partial_pass.bed",
    "content": "15\t2999\t5000\tbreakend_del_partial_pass_b\tDEL\n"
  },
  {
    "path": "tests/AnnotSV/test_34_bracketedToAngularNotations/input/input-dup.bed",
    "content": "2\t2999\t5000\tbreakend_dup_a\tDUP\n"
  },
  {
    "path": "tests/AnnotSV/test_34_bracketedToAngularNotations/input/input-empty_del.bed",
    "content": "15\t53040040\t53040042\tempty_del_a\tDEL\n"
  },
  {
    "path": "tests/AnnotSV/test_34_bracketedToAngularNotations/input/input-ins_by_gridss.bed",
    "content": "13\t53040040\t53040041\tns_by_gridss\tINS\tATATATATACACAC \n"
  },
  {
    "path": "tests/AnnotSV/test_34_bracketedToAngularNotations/input/input-inv1.bed",
    "content": "3\t2998\t5000\tbreakend_inv_1_a\tINV\n"
  },
  {
    "path": "tests/AnnotSV/test_34_bracketedToAngularNotations/input/input-square-bracketed-del_1.vcf",
    "content": "#CHROM\tPOS\tID\tREF\tALT\tQUAL\tFILTER\tINFO\tFORMAT\tNORMAL\tTUMOR\n12\t3000\tbreakend_del_1_a\tT\tT[12:5000[\t.\tPASS\tSVTYPE=BND;EXTRA=DEL_PAIRED;MATEID=breakend_del_1_b\tGT\t0/0\t0/1\n12\t5000\tbreakend_del_1_b\tT\t]12:3000]T\t.\tPASS\tSVTYPE=BND;EXTRA=DEL_PAIRED;MATEID=breakend_del_1_a\tGT\t0/0\t0/1\n"
  },
  {
    "path": "tests/AnnotSV/test_34_bracketedToAngularNotations/input/input-square-bracketed-del_partial_pass.vcf",
    "content": "#CHROM\tPOS\tID\tREF\tALT\tQUAL\tFILTER\tINFO\tFORMAT\tNORMAL\tTUMOR\n15\t5000\tbreakend_del_partial_pass_a\tT\t]15:3000]T\t.\tFAIL\tSVTYPE=BND;EXTRA=DEL_PAIRED_PARTIAL_PASS;MATEID=breakend_del_partial_pass_b\tGT\t0/0\t0/1\n15\t3000\tbreakend_del_partial_pass_b\tT\tT[15:5000[\t.\tPASS\tSVTYPE=BND;EXTRA=DEL_PAIRED_PARTIAL_PASS;MATEID=breakend_del_partial_pass_a\tGT\t0/0\t0/1\n"
  },
  {
    "path": "tests/AnnotSV/test_34_bracketedToAngularNotations/input/input-square-bracketed-del_unordered.vcf",
    "content": "#CHROM\tPOS\tID\tREF\tALT\tQUAL\tFILTER\tINFO\tFORMAT\tNORMAL\tTUMOR\n22\t5000\tbreakend_del_unordered_b\tT\t]22:3000]T\t.\tPASS\tSVTYPE=BND;EXTRA=DEL_PAIRED;MATEID=breakend_del_unordered_a\tGT\t0/0\t0/1\n22\t3000\tbreakend_del_unordered_a\tT\tT[22:5000[\t.\tPASS\tSVTYPE=BND;EXTRA=DEL_PAIRED;MATEID=breakend_del_unordered_b\tGT\t0/0\t0/1\n"
  },
  {
    "path": "tests/AnnotSV/test_34_bracketedToAngularNotations/input/input-square-bracketed-dup.vcf",
    "content": "#CHROM\tPOS\tID\tREF\tALT\tQUAL\tFILTER\tINFO\tFORMAT\tNORMAL\tTUMOR\n2\t3000\tbreakend_dup_a\tT\t]2:5000]T\t.\tPASS\tSVTYPE=BND;EXTRA=DUP_PAIRED;MATEID=breakend_dup_b\tGT\t0/0\t0/1\n2\t5000\tbreakend_dup_b\tT\tT[2:3000[\t.\tPASS\tSVTYPE=BND;EXTRA=DUP_PAIRED;MATEID=breakend_dup_a\tGT\t0/0\t0/1\n"
  },
  {
    "path": "tests/AnnotSV/test_34_bracketedToAngularNotations/input/input-square-bracketed-empty_del.vcf",
    "content": "#CHROM\tPOS\tID\tREF\tALT\tQUAL\tFILTER\tINFO\tFORMAT\tNORMAL\tTUMOR\n15\t53040041\tempty_del_a\tT\tT[15:53040042[\t.\tPASS\tSVTYPE=BND;EXTRA=DEL_NO_SIZE;MATEID=empty_del_b\tGT\t0/0\t0/1\n15\t53040042\tempty_del_b\tA\t]15:53040041]A\t.\tPASS\tSVTYPE=BND;EXTRA=DEL_NO_SIZE;MATEID=empty_del_a\tGT\t0/0\t0/1\n"
  },
  {
    "path": "tests/AnnotSV/test_34_bracketedToAngularNotations/input/input-square-bracketed-ins_by_gridss.vcf",
    "content": "#CHROM\tPOS\tID\tREF\tALT\tQUAL\tFILTER\tINFO\tFORMAT\tNORMAL\tTUMOR\n13\t53040041\tins_by_gridss\tT\tTATATATATACACAC[13:53040042[\t.\tPASS\tSVTYPE=BND;EXTRA=DEL_INS_FROM_GRIDSS\tGT\t0/0\t0/1\n13\t53040042\tins_by_gridss\tA\t]13:53040041]ATATATATACACACA\t.\tPASS\tSVTYPE=BND;EXTRA=DEL_INS_FROM_GRIDSS\tGT\t0/0\t0/1\n"
  },
  {
    "path": "tests/AnnotSV/test_34_bracketedToAngularNotations/input/input-square-bracketed-inv1.vcf",
    "content": "#CHROM\tPOS\tID\tREF\tALT\tQUAL\tFILTER\tINFO\tFORMAT\tNORMAL\tTUMOR\n3\t2999\tbreakend_inv_1_a\tT\tT]3:5000]\t.\tPASS\tSVTYPE=BND;EXTRA=INV_PAIRED;MATEID=breakend_inv_1_b\tGT\t0/0\t0/1\n3\t5000\tbreakend_inv_1_b\tT\t[3:2999[T\t.\tPASS\tSVTYPE=BND;EXTRA=INV_PAIRED;MATEID=breakend_inv_1_a\tGT\t0/0\t0/1\n"
  },
  {
    "path": "tests/AnnotSV/test_34_bracketedToAngularNotations/input/input-square-bracketed-inv2.vcf",
    "content": "#CHROM\tPOS\tID\tREF\tALT\tQUAL\tFILTER\tINFO\tFORMAT\tNORMAL\tTUMOR\n3\t5001\tbreakend_inv_2_b\tT\tT]3:3000]\t.\tPASS\tSVTYPE=BND;EXTRA=INV_PAIRED;MATEID=breakend_inv_2_a\tGT\t0/0\t0/1\n3\t3000\tbreakend_inv_2_a\tT\t[3:5001[T\t.\tPASS\tSVTYPE=BND;EXTRA=INV_PAIRED;MATEID=breakend_inv_2_b\tGT\t0/0\t0/1\n"
  },
  {
    "path": "tests/AnnotSV/test_34_bracketedToAngularNotations/input/input-square-bracketed-inv3.vcf",
    "content": "##fileformat=VCFv4.1\n##contig=<ID=1,length=249250621>\n##contig=<ID=2,length=243199373>\n##contig=<ID=3,length=198022430>\n##contig=<ID=4,length=191154276>\n##contig=<ID=5,length=180915260>\n##contig=<ID=6,length=171115067>\n##contig=<ID=7,length=159138663>\n##contig=<ID=8,length=146364022>\n##contig=<ID=9,length=141213431>\n##contig=<ID=10,length=135534747>\n##contig=<ID=11,length=135006516>\n##contig=<ID=12,length=133851895>\n##contig=<ID=13,length=115169878>\n##contig=<ID=14,length=107349540>\n##contig=<ID=15,length=102531392>\n##contig=<ID=16,length=90354753>\n##contig=<ID=17,length=81195210>\n##contig=<ID=18,length=78077248>\n##contig=<ID=19,length=59128983>\n##contig=<ID=20,length=63025520>\n##contig=<ID=21,length=48129895>\n##contig=<ID=22,length=51304566>\n##contig=<ID=X,length=155270560>\n##contig=<ID=Y,length=59373566>\n##FORMAT=<ID=GT,Number=1,Type=String,Description=\"Genotype\">\n##FORMAT=<ID=AD,Number=R,Type=Integer,Description=\"Allelic depths for the ref and alt alleles in the order listed\">\n##INFO=<ID=SVLEN,Number=1,Type=Integer,Description=\"Length of the SV\">\n##INFO=<ID=SVTYPE,Number=1,Type=String,Description=\"Type of the SV\">\n##INFO=<ID=SUPP_SEQ,Number=.,Type=String,Description=\"Vector of supporting technologies\">\n##INFO=<ID=SUPP_VAL,Number=.,Type=String,Description=\"Vector of supporting technologies\">\n##INFO=<ID=GENE,Number=.,Type=String,Description=\"Gene(s) overlap in breakpoint\">\n##INFO=<ID=CLUSTER,Number=.,Type=String,Description=\"IDs of other clustered breakpoints\">\n##INFO=<ID=EXTRA,Number=.,Type=String,Description=\"Extra info for testing\">\n##INFO=<ID=END,Number=1,Type=Integer,Description=\"End position of the variant described in this record\">\n#CHROM\tPOS\tID\tREF\tALT\tQUAL\tFILTER\tINFO\tFORMAT\tNORMAL\tTUMOR\n1\t9135238\t10_2\tG\tG]1:7852191]\t.\tPASS\tSVTYPE=BND;MATEID=10_1;SVCLASS=inversion\tRC:PS\t0:0\t10:10\n1\t7852191\t10_1\tA\tA]1:9135238]\t.\tPASS\tSVTYPE=BND;MATEID=10_2;SVCLASS=inversion\tRC:PS\t0:0\t10:10\n"
  },
  {
    "path": "tests/AnnotSV/test_34_bracketedToAngularNotations/input/input-square-bracketed-tra1.vcf",
    "content": "##fileformat=VCFv4.1\n##contig=<ID=1,length=249250621>\n##contig=<ID=2,length=243199373>\n##contig=<ID=3,length=198022430>\n##contig=<ID=4,length=191154276>\n##contig=<ID=5,length=180915260>\n##contig=<ID=6,length=171115067>\n##contig=<ID=7,length=159138663>\n##contig=<ID=8,length=146364022>\n##contig=<ID=9,length=141213431>\n##contig=<ID=10,length=135534747>\n##contig=<ID=11,length=135006516>\n##contig=<ID=12,length=133851895>\n##contig=<ID=13,length=115169878>\n##contig=<ID=14,length=107349540>\n##contig=<ID=15,length=102531392>\n##contig=<ID=16,length=90354753>\n##contig=<ID=17,length=81195210>\n##contig=<ID=18,length=78077248>\n##contig=<ID=19,length=59128983>\n##contig=<ID=20,length=63025520>\n##contig=<ID=21,length=48129895>\n##contig=<ID=22,length=51304566>\n##contig=<ID=X,length=155270560>\n##contig=<ID=Y,length=59373566>\n##FORMAT=<ID=GT,Number=1,Type=String,Description=\"Genotype\">\n##FORMAT=<ID=AD,Number=R,Type=Integer,Description=\"Allelic depths for the ref and alt alleles in the order listed\">\n##INFO=<ID=SVLEN,Number=1,Type=Integer,Description=\"Length of the SV\">\n##INFO=<ID=SVTYPE,Number=1,Type=String,Description=\"Type of the SV\">\n##INFO=<ID=SUPP_SEQ,Number=.,Type=String,Description=\"Vector of supporting technologies\">\n##INFO=<ID=SUPP_VAL,Number=.,Type=String,Description=\"Vector of supporting technologies\">\n##INFO=<ID=GENE,Number=.,Type=String,Description=\"Gene(s) overlap in breakpoint\">\n##INFO=<ID=CLUSTER,Number=.,Type=String,Description=\"IDs of other clustered breakpoints\">\n##INFO=<ID=EXTRA,Number=.,Type=String,Description=\"Extra info for testing\">\n##INFO=<ID=END,Number=1,Type=Integer,Description=\"End position of the variant described in this record\">\n#CHROM\tPOS\tID\tREF\tALT\tQUAL\tFILTER\tINFO\tFORMAT\tNORMAL\tTUMOR\n2\t321682\ttra_a\tT\t]13:123456]T\t.\tPASS\tSVTYPE=BND\tGT\t0/0\t0/1\n13\t123456\ttra_b\tC\tC[2:321682[\t.\tPASS\tSVTYPE=BND\tGT\t0/0\t0/1\n"
  },
  {
    "path": "tests/AnnotSV/test_34_bracketedToAngularNotations/input/input-square-bracketed-tra2.vcf",
    "content": "#CHROM\tPOS\tID\tREF\tALT\tQUAL\tFILTER\tINFO\tFORMAT\tNORMAL\tTUMOR\n17\t198982\ttrn_no_mateid_a\tA\tA]2:321681]\t.\tPASS\tSVTYPE=BND;EXTRA=TRN_PAIRED_WITHOUT_MATE_ID\tGT\t0/0\t0/1\n2\t321681\ttrn_no_mateid_b\tG\tG]17:198982]\t.\tPASS\tSVTYPE=BND;EXTRA=TRN_PAIRED_WITHOUT_MATE_ID\tGT\t0/0\t0/1\n"
  },
  {
    "path": "tests/AnnotSV/test_34_bracketedToAngularNotations/input/input-tra1.bed",
    "content": "2\t321681\t321682\ttra_a\tTRA\n13\t123455\t123456\ttra_b\tTRA\n"
  },
  {
    "path": "tests/AnnotSV/test_34_bracketedToAngularNotations/input/input_OnlyTheReciprocalBND_square-bracketed-del_1.vcf",
    "content": "#CHROM\tPOS\tID\tREF\tALT\tQUAL\tFILTER\tINFO\tFORMAT\tNORMAL\tTUMOR\n12\t5000\tbreakend_del_1_b\tT\t]12:3000]T\t.\tPASS\tSVTYPE=BND;EXTRA=DEL_PAIRED;MATEID=breakend_del_1_a;CIPOS=-1,1;CIEND=-5,5\tGT\t0/0\t0/1\n"
  },
  {
    "path": "tests/AnnotSV/test_34_bracketedToAngularNotations/input/input_OnlyTheReciprocalBND_square-bracketed-del_partial_pass.vcf",
    "content": "#CHROM\tPOS\tID\tREF\tALT\tQUAL\tFILTER\tINFO\tFORMAT\tNORMAL\tTUMOR\n15\t5000\tbreakend_del_partial_pass_a\tT\t]15:3000]T\t.\tFAIL\tSVTYPE=BND;EXTRA=DEL_PAIRED_PARTIAL_PASS;MATEID=breakend_del_partial_pass_b\tGT\t0/0\t0/1\n"
  },
  {
    "path": "tests/AnnotSV/test_34_bracketedToAngularNotations/input/input_OnlyTheReciprocalBND_square-bracketed-del_unordered.vcf",
    "content": "#CHROM\tPOS\tID\tREF\tALT\tQUAL\tFILTER\tINFO\tFORMAT\tNORMAL\tTUMOR\n22\t5000\tbreakend_del_unordered_b\tT\t]22:3000]T\t.\tPASS\tSVTYPE=BND;EXTRA=DEL_PAIRED;MATEID=breakend_del_unordered_a\tGT\t0/0\t0/1\n"
  },
  {
    "path": "tests/AnnotSV/test_34_bracketedToAngularNotations/input/input_OnlyTheReciprocalBND_square-bracketed-dup.vcf",
    "content": "#CHROM\tPOS\tID\tREF\tALT\tQUAL\tFILTER\tINFO\tFORMAT\tNORMAL\tTUMOR\n2\t5000\tbreakend_dup_b\tT\tT[2:3000[\t.\tPASS\tSVTYPE=BND;EXTRA=DUP_PAIRED;MATEID=breakend_dup_a\tGT\t0/0\t0/1\n"
  },
  {
    "path": "tests/AnnotSV/test_34_bracketedToAngularNotations/input/input_OnlyTheReciprocalBND_square-bracketed-empty_del.vcf",
    "content": "#CHROM\tPOS\tID\tREF\tALT\tQUAL\tFILTER\tINFO\tFORMAT\tNORMAL\tTUMOR\n15\t53040042\tempty_del_b\tA\t]15:53040041]A\t.\tPASS\tSVTYPE=BND;EXTRA=DEL_NO_SIZE;MATEID=empty_del_a\tGT\t0/0\t0/1\n"
  },
  {
    "path": "tests/AnnotSV/test_34_bracketedToAngularNotations/input/input_OnlyTheReciprocalBND_square-bracketed-ins_by_gridss.vcf",
    "content": "#CHROM\tPOS\tID\tREF\tALT\tQUAL\tFILTER\tINFO\tFORMAT\tNORMAL\tTUMOR\n13\t53040042\tins_by_gridss\tA\t]13:53040041]ATATATATACACACA\t.\tPASS\tSVTYPE=BND;EXTRA=DEL_INS_FROM_GRIDSS\tGT\t0/0\t0/1\n"
  },
  {
    "path": "tests/AnnotSV/test_34_bracketedToAngularNotations/input/input_OnlyTheReciprocalBND_square-bracketed-inv1.vcf",
    "content": "#CHROM\tPOS\tID\tREF\tALT\tQUAL\tFILTER\tINFO\tFORMAT\tNORMAL\tTUMOR\n3\t5000\tbreakend_inv_1_b\tT\t[3:2999[T\t.\tPASS\tSVTYPE=BND;EXTRA=INV_PAIRED;MATEID=breakend_inv_1_a\tGT\t0/0\t0/1\n"
  },
  {
    "path": "tests/AnnotSV/test_34_bracketedToAngularNotations/input/input_OnlyTheReciprocalBND_square-bracketed-inv2.vcf",
    "content": "#CHROM\tPOS\tID\tREF\tALT\tQUAL\tFILTER\tINFO\tFORMAT\tNORMAL\tTUMOR\n3\t5001\tbreakend_inv_2_b\tT\tT]3:3000]\t.\tPASS\tSVTYPE=BND;EXTRA=INV_PAIRED;MATEID=breakend_inv_2_a\tGT\t0/0\t0/1\n"
  },
  {
    "path": "tests/AnnotSV/test_34_bracketedToAngularNotations/input/input_OnlyTheReciprocalBND_square-bracketed-tra1_1.vcf",
    "content": "#CHROM\tPOS\tID\tREF\tALT\tQUAL\tFILTER\tINFO\tFORMAT\tNORMAL\tTUMOR\n2\t321682\ttra_a\tT\t]13:123456]T\t.\tPASS\tSVTYPE=BND\tGT\t0/0\t0/1\n"
  },
  {
    "path": "tests/AnnotSV/test_34_bracketedToAngularNotations/input/input_OnlyTheReciprocalBND_square-bracketed-tra1_2.vcf",
    "content": "#CHROM\tPOS\tID\tREF\tALT\tQUAL\tFILTER\tINFO\tFORMAT\tNORMAL\tTUMOR\n13\t123456\ttra_b\tC\tC[2:321682[\t.\tPASS\tSVTYPE=BND\tGT\t0/0\t0/1\n"
  },
  {
    "path": "tests/AnnotSV/test_35_phenogenius/command_Tcl.sh",
    "content": "#!/bin/bash -x\n\nset -eo pipefail\n\n\ncut=\"$ANNOTSV/tests/AnnotSV/scripts/cutWithColumnNames.tcl\"\n\n\n\n# With HPO where Exomiser and Phenogenius quite disagree\n########################################################\nmkdir -p ./output\nrm -f \"./output/test.GRCh37_tcl.annotated.tsv\"\n$ANNOTSV/bin/AnnotSV -SVinputFile ./input/test.bed  -outputFile \"./output/test.GRCh38_tcl.annotated.tsv\" -svtbedcol 5 -genomeBuild GRCh38 -hpo \"HP:0001156,HP:0001363,HP:0011304,HP:0010055\"\n\n# $cut \"./output/test.GRCh38_tcl.annotated.tsv\" \"Annotation_mode;PhenoGenius_score;PhenoGenius_phenotype;PhenoGenius_specificity;Exomiser_gene_pheno_score;Human_pheno_evidence\"\n# Annotation_mode PhenoGenius_score       PhenoGenius_phenotype   PhenoGenius_specificity Exomiser_gene_pheno_score       Human_pheno_evidence\n# full                    C       0.6955\n# split   0.47    Brachydactyly   C       0.6955  1p36 deletion syndrome;Brachydactyly;Broad hallux;Broad thumb;Camptodactyly of finger;Craniosynostosis;Delayed cranial suture closure;Foot polydactyly\n# split   -1.0                    0.0000\n# ...\nannotations=`$cut \"./output/test.GRCh38_tcl.annotated.tsv\" \"Annotation_mode;PhenoGenius_specificity\" | grep full`\nif [ `echo $annotations | grep -c \"C\"` == 1 ]\nthen\n        echo \"Ok\"\nelse\n        echo \"error 1: check the PhenoGenius_specificity\"\n        exit 1\nfi\n\n\n# With other HPO where Exomiser and Phenogenius agree\n#####################################################\nrm -f \"./output/PKD1.annotated.tsv\"\n$ANNOTSV/bin/AnnotSV -SVinputFile ./input/PKD1.bed -outputFile \"./output/PKD1.annotated.tsv\" -svtbedcol 4 -genomeBuild GRCh38 -hpo \"HP:0000107,HP:0000108,HP:0001407,HP:0005562\"\n \n# $cut \"./output/PKD1.annotated.tsv\" \"Annotation_mode;PhenoGenius_score;PhenoGenius_phenotype;PhenoGenius_specificity;Exomiser_gene_pheno_score;Human_pheno_evidence\"\n# Annotation_mode PhenoGenius_score       PhenoGenius_phenotype   PhenoGenius_specificity Exomiser_gene_pheno_score       Human_pheno_evidence\n# full                    A       0.9714\n# split   6.82    Hepatic cysts, Renal corticomedullary cysts, Multiple renal cysts, Renal cyst   A       0.9714  Hepatic cysts;Multiple renal cysts;Polycystic kidney disease 1;Polycystic kidney dysplasia;Renal corticomedullary cysts;Renal cyst\n# ...\nannotations=`$cut \"./output/PKD1.annotated.tsv\" \"Annotation_mode;PhenoGenius_specificity\" | grep full`\nif [ `echo $annotations | grep -c \"A\"` == 1 ]\nthen\n        echo \"Ok\"\nelse\n        echo \"error 1: check the PhenoGenius_specificity\"\n        exit 1\nfi\n\n\n\necho \"ok - Finished\"\n\n"
  },
  {
    "path": "tests/AnnotSV/test_35_phenogenius/input/PKD1.bed",
    "content": "16\t2098710\t2105898\tDEL\tPKD1gene\n16\t3057619\t3058179\tDEL\tPKD1reg_el\n"
  },
  {
    "path": "tests/AnnotSV/test_35_phenogenius/input/test.bed",
    "content": "#chrom\tstart\tend\tty\tSV type\te\tez\tferf\tfde \tl\tkj\tkdfe\te\n1\t3204667\t4204717\tpp\tDel\tDEL_pindel_129\tACACCATTATCATTATCATCACCACCACCACCACCACCACACCACCACCAT\tA\t.\tPASS\tAC=2432;AF=0.485623;AFR_AF=0.4902;AMR_AF=0.4841;AN=5008;CS=DEL_pindel;EAS_AF=0.4841;END=4204717;EUR_AF=0.4841;NS=2504;SAS_AF=0.4836;SITEPOST=0.9999;SVTYPE=DEL\tGT\t1|0\n1\t8200707\t8211256\tpp\tDUP\tDUP_gs_CNV_1_8200707_8211256\tG\t<CN2>\t.\tPASS\tAC=44;AF=0.00878594;AFR_AF=0.0015;AMR_AF=0.0086;AN=5008;CS=DUP_gs;EAS_AF=0.001;END=8211256;EUR_AF=0.0308;NS=2504;SAS_AF=0.0041;SITEPOST=0.9888;SVTYPE=DUP\tGT\t0|1\n1\t10482499\t10483790\tpp\tDEL\tUW_VH_0\tG\t<CN0>\t100\tPASS\tAC=1649;AF=0.329273;AFR_AF=0.4092;AMR_AF=0.3458;AN=5008;CIEND=0,468;CIPOS=-504,0;CS=DEL_union;EAS_AF=0.2837;END=10483790;EUR_AF=0.3091;MC=SI_BD_118,EM_DL_DEL1005915,YL_CN_ASW_57,YL_CN_STU_30,YL_CN_ESN_29,YL_CN_JPT_45,YL_CN_PEL_36,YL_CN_GIH_28;NS=2504;SAS_AF=0.2771;SVTYPE=DEL\tGT\t1|0\n1\t17226064\t17452112\tpp\tDUP\tDUP_gs_CNV_1_17026064_17052112\tG\t<CN2>,<CN3>,<CN4>,<CN5>\t.\tPASS\tAC=1463,2202,294,57;AF=0.292133,0.439696,0.0587061,0.0113818;AFR_AF=0.2829,0.4327,0.0522,0.0318;AMR_AF=0.304,0.4193,0.0389,0.0043;AN=5008;CS=DUP_gs;EAS_AF=0.1667,0.631,0.13,0.0079;SVTYPE=GAIN\tGT\t2|1\n1\t145120320\t145182150\tpp\tDEL\tDEL_pindel_129\tACACCATTATCATTATCATCACCACCACCACCACCACCACACCACCACCAT\tA\t.\tPASS\tAC=2432;AF=0.485623;AFR_AF=0.4902;AMR_AF=0.4841;AN=5008;CS=DEL_pindel;EAS_AF=0.4841;END=4204717;EUR_AF=0.4841;NS=2504;SAS_AF=0.4836;SITEPOST=0.9999;SVTYPE=DEL\tGT\t1|0\n11\t5106964\t5107211\tpp\tDEL_ALU\tDEL_pindel_32701\tTAAAGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTGGTAGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCGCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAA\tT\t.\tPASS\tAC=3429;AF=0.684704;AFR_AF=0.8041;AMR_AF=0.6671;AN=5008;CS=DEL_pindel;EAS_AF=0.5565;END=5107211;EUR_AF=0.6799;MEINFO=AluYc1,58,281,+;NS=2504;SAS_AF=0.6728;SITEPOST=0.9983;SVTYPE=DEL_ALU\tGT\t0|1\n11\t5521609\t5523196\tpp\tDEL\tUW_VH_1531\tT\t<CN0>\t100\tPASS\tAC=429;AF=0.0856629;AFR_AF=0.0098;AMR_AF=0.1599;AN=5008;CIEND=0,403;CIPOS=-447,0;CS=DEL_union;EAS_AF=0.0744;END=5523196;EUR_AF=0.164;MC=EM_DL_DEL10154883,SI_BD_11162,YL_CN_PUR_3090,BI_GS_DEL1_B1_P1829_437,YL_CN_PEL_2285;NS=2504;SAS_AF=0.0665;SVTYPE=DEL\tGT\t1|0\n4\t91931556\t91935838\tpp\tDEL\tBI_GS_DEL1_B2_P0785_570\tG\t<CN0>\t100\tPASS\tAC=1284;AF=0.25639;AFR_AF=0.0537;AMR_AF=0.2205;AN=5008;CIEND=0,0;CIPOS=0,0;CS=DEL_union;EAS_AF=0.3919;END=91935838;EUR_AF=0.3936;MC=EM_DL_DEL72105,YL_CN_YRI_1298,UW_VH_389;NS=2504;SAS_AF=0.2751;SVTYPE=DEL\tGT\t0|1\n4\t94439081\t94439177\tpp\tDEL\tDEL_pindel_12582\tTATGTATGTATATACATACATGTATATGTATGTATATACATACATGTACATGTATGTATATACATACATGTATATGTATGTATATACATACATGTAC\tT\t.\tPASS\tAC=1176;AF=0.234824;AFR_AF=0.1573;AMR_AF=0.2248;AN=5008;CS=DEL_pindel;EAS_AF=0.2123;END=94439177;EUR_AF=0.3598;NS=2504;SAS_AF=0.2413;SITEPOST=0.9929;SVTYPE=DEL\tGT\t0|1\n7\t49057624\t49057625\tpp\tALU\tALU_umary_ALU_6021\tT\t<INS:ME:ALU>\t.\t.\tAC=2228;AF=0.444888;AFR_AF=0.5983;AMR_AF=0.4193;AN=5008;CS=ALU_umary;EAS_AF=0.2817;EUR_AF=0.4533;MEINFO=AluYc1,2,281,-;NS=2504;SAS_AF=0.4151;SITEPOST=1;SVLEN=279;SVTYPE=ALU;TSD=GCCTGTAGCTTGGTTCT\tGT\t1|0\n7\t49725896\t49725897\tpp\tLINE1\tL1_umary_LINE1_1503\tC\t<INS:ME:LINE1>\t.\t.\tAC=2805;AF=0.560104;AFR_AF=0.6225;AMR_AF=0.4755;AN=5008;CS=L1_umary;EAS_AF=0.5456;EUR_AF=0.5378;MEINFO=LINE1,5545,5845,-;NS=2504;SAS_AF=0.5736;SITEPOST=0.9996;SVLEN=300;SVTYPE=LINE1;TSD=null\tGT\t0|1\n7\t50104763\t50106067\tpp\tDEL\tBI_GS_DEL1_B2_P1289_68\tC\t<CN0>\t100\tPASS\tAC=189;AF=0.0377396;AFR_AF=0.0832;AMR_AF=0.0231;AN=5008;CIEND=0,1;CIPOS=0,1;CS=DEL_union;EAS_AF=0;END=50106067;EUR_AF=0.0547;MC=SI_BD_7759,UW_VH_2223;NS=2504;SAS_AF=0.0082;SVTYPE=DEL\tGT\t0|1\n"
  },
  {
    "path": "tests/AnnotSV/test_36_chm13/command_Tcl.sh",
    "content": "#!/bin/bash -x\n\nset -eo pipefail\n\n\ncut=\"$ANNOTSV/tests/AnnotSV/scripts/cutWithColumnNames.tcl\"\n\nfunction exists_in_list() {\n    LIST=$1\n    DELIMITER=$2\n    VALUE=$3\n    [[ \"$LIST\" =~ ($DELIMITER|^)$VALUE($DELIMITER|$) ]]\n}\n\n\nmkdir -p ./output\n\n\n# Check that no column is shifted\n#################################\n\n# RefSeq\nrm -f \"./output/test_tcl.annotated.tsv\"\n$ANNOTSV/bin/AnnotSV -SVinputFile \"./input/test.bed\" -svtBEDcol 4 -genomeBuild CHM13 -outputFile \"./output/test_tcl.annotated.tsv\" -Tx RefSeq\n\nfor v in `$cut \"./output/test_tcl.annotated.tsv\" \"ACMG_class\" | sort -u`\ndo\n        if ! exists_in_list \"1 2 3 4 5 ACMG_class full=1 full=2 full=3 full=4 full=5 full=NA NA\" \" \" \"$v\"\n        then\n                echo \"error1: (test39)\"\n                exit 1\n        fi\ndone\n\n\n# ENSEMBL\nrm -f \"./output/test_tcl.annotated.tsv\"\n$ANNOTSV/bin/AnnotSV -SVinputFile \"./input/test.bed\" -svtBEDcol 4 -genomeBuild CHM13 -outputFile \"./output/test_tcl.annotated.tsv\" -Tx ENSEMBL\n\nfor v in `$cut \"./output/test_tcl.annotated.tsv\" \"ACMG_class\" | sort -u`\ndo\n        if ! exists_in_list \"1 2 3 4 5 ACMG_class full=1 full=2 full=3 full=4 full=5 full=NA NA\" \" \" \"$v\"\n        then\n                echo \"error2: (test39)\"\n                exit 1\n        fi\ndone\n\n\necho \"ok - Finished\"\n\n\n"
  },
  {
    "path": "tests/AnnotSV/test_36_chm13/input/test.bed",
    "content": "1\t108190708\t108194629\tDEL\n"
  },
  {
    "path": "tests/AnnotSV/test_37_SVLEN/README",
    "content": "cd $ANNOTSV/tests/data/test_37_SVLEN\n\n\n# SV can be described:\n# - in different file format (VCF, BED)\n# - with different notations \n#\n# Categories:\n#############\n\n- VCF: <INS> (symbolic SV allele <=> angle-bracketed notation)\n\n- VCF: <DEL>, <INV>, <DUP>, <CN0>... (symbolic SV allele, other than INS <=> angle-bracketed notation)\n\tinput-angle-bracketed-del.vcf\n\tinput-angle-bracketed-dup.vcf\n\tinput-angle-bracketed-inv.vcf\n\tinput-angle-bracketed-tra.vcf\n\n- VCF: square-bracketed notation\n\tinput-square-bracketed-del.vcf\n\tinput-square-bracketed-dup.vcf\n\tinput-square-bracketed-ins_by_gridss.vcf\n\tinput-square-bracketed-inv.vcf\n\tinput-square-bracketed-tra.vcf\n\n- VCF: REF=A ALT=ATTCGTT\n\n- BED: CHROM POS END ... (0-based notation)\n\tinput-del.bed\n\tinput-dup.bed\n\tinput-ins_by_gridss.bed\n\tinput-inv.bed\n\tinput-tra.bed\n"
  },
  {
    "path": "tests/AnnotSV/test_37_SVLEN/command_Tcl.sh",
    "content": "#!/bin/bash -x\n\nset -eo pipefail\n\n###################################################################\n####                                                           ####\n####                Check the SV_length in the output          ####\n####                                                           ####\n###################################################################\n\nmkdir -p ./output\nrm -f ./output/category_*.annotated.tsv\nrm -f ./output/category_*.unannotated.tsv\n\n\ncut=\"$ANNOTSV/tests/AnnotSV/scripts/cutWithColumnNames.tcl\"\n\n\n##############################################################\n# Category 1 -\n# VCF: <INS> (symbolic SV allele <=> angle-bracketed notation)\n##############################################################\n\n# ...Ajouter un exemple\n\n\n\n##############################################################\n# Category 2 -\n# VCF: <DEL>, <INV>, <DUP>, <CN0>... (symbolic SV allele, other than INS <=> angle-bracketed notation)\n######################################################################################################\n\n\n# input-angle-bracketed-del.vcf \n###############################\n\n$ANNOTSV/bin/AnnotSV -SVinputFile \"./input/input-angle-bracketed-del.vcf\" -outputFile \"./output/category_2_angle-bracketed-del.annotated.tsv\"\n\n# tail -1 ./input/input-angle-bracketed-del.vcf\n# 12      3000    breakend_del_1_a        T       <DEL>   .       PASS    END=5000;EXTRA=DEL_PAIRED;MATEID=breakend_del_1_b       GT      0/0     0/1\n\nangleResult=`$cut \"./output/category_2_angle-bracketed-del.annotated.tsv\" \"SV_length\" | tail -1  | awk 'BEGIN{ORS=\" \"; OFS=\" \"} { print $1 }'`\nif [ \"$angleResult\" != \"-2000 \" ]\nthen\n        echo \"Error with category_2 (angle del)\"\n        exit 1\nfi\n\necho \"Category_2 (angle del) OK\"\n\n\n# input-angle-bracketed-dup.vcf\n###############################\n\n$ANNOTSV/bin/AnnotSV -SVinputFile \"./input/input-angle-bracketed-dup.vcf\" -outputFile \"./output/category_2_angle-bracketed-dup.annotated.tsv\"\n\n# tail -1 ./input/input-angle-bracketed-dup.vcf\n# 2       3000    breakend_dup_a  T       <DUP>   .       PASS    END=5000EXTRA=DUP_PAIRED;MATEID=breakend_dup_b  GT      0/0     0/1\n\nangleResult=`$cut \"./output/category_2_angle-bracketed-dup.annotated.tsv\" \"SV_length\" | tail -1 | awk 'BEGIN{ORS=\" \"; OFS=\" \"} { print $1 }'`\nif [ \"$angleResult\" != \"2000 \" ]\nthen\n        echo \"Error with category_2 (angle dup)\"\n        exit 1\nfi\n\necho \"Category_2 (angle dup) OK\"\n\n\n# input-angle-bracketed-inv.vcf\n###############################\n\n$ANNOTSV/bin/AnnotSV -SVinputFile \"./input/input-angle-bracketed-inv.vcf\" -outputFile \"./output/category_2_angle-bracketed-inv.annotated.tsv\"\n\n# tail -1 ./input/input-angle-bracketed-inv.vcf\n# 3       2999    breakend_inv_1_a        T       <INV>   .       PASS    END=5000;EXTRA=INV_PAIRED;MATEID=breakend_inv_1_b       GT      0/0     0/1\n\nangleResult=`$cut \"./output/category_2_angle-bracketed-inv.annotated.tsv\" \"SV_length\" | tail -1 | awk 'BEGIN{ORS=\" \"; OFS=\" \"} { print $1 }'`\nif [ \"$angleResult\" != \"2001 \" ]\nthen\n        echo \"Error with category_2 (angle inv)\"\n        exit 1\nfi\n\necho \"Category_2 (angle inv) OK\"\n\n\n# input-angle-bracketed-tra.vcf\n###############################\n\n$ANNOTSV/bin/AnnotSV -SVinputFile \"./input/input-angle-bracketed-inv.vcf\" -outputFile \"./output/category_2_angle-bracketed-inv.annotated.tsv\"\n\n# tail -1 ./input/input-angle-bracketed-inv.vcf\n# 3       2999    breakend_inv_1_a        T       <INV>   .       PASS    END=5000;EXTRA=INV_PAIRED;MATEID=breakend_inv_1_b       GT      0/0     0/1\n\nangleResult=`$cut \"./output/category_2_angle-bracketed-inv.annotated.tsv\" \"SV_length\" | tail -1 | awk 'BEGIN{ORS=\" \"; OFS=\" \"} { print $1 }'`\nif [ \"$angleResult\" != \"2001 \" ]\nthen\n        echo \"Error with category_2 (angle tra)\"\n        exit 1\nfi\n\necho \"Category_2 (angle tra) OK\"\n\n\n\n\n################################\n# Category 3 -\n# VCF: square-bracketed notation\n################################\n\n\n# input-square-bracketed-del.vcf\n################################\n\n$ANNOTSV/bin/AnnotSV -SVinputFile \"./input/input-square-bracketed-del.vcf\" -outputFile \"./output/category_3_square-bracketed-del.annotated.tsv\"\n\n# tail -2 ./input/input-square-bracketed-del.vcf\n# 12      3000    breakend_del_1_a        T       T[12:5000[      .       PASS    SVTYPE=BND;EXTRA=DEL_PAIRED;MATEID=breakend_del_1_b     GT      0/0     0/1\n# 12      5000    breakend_del_1_b        T       ]12:3000]T      .       PASS    SVTYPE=BND;EXTRA=DEL_PAIRED;MATEID=breakend_del_1_a     GT      0/0     0/1\n\nsquareResult=`$cut \"./output/category_3_square-bracketed-del.annotated.tsv\" \"SV_length\" | tail -1 | awk 'BEGIN{ORS=\" \"; OFS=\" \"} { print $1 }'`\nif [ \"$squareResult\" != \"-2000 \" ]\nthen\n        echo \"Error with category_3 (square del)\"\n        exit 1\nfi\n\necho \"Category_3 (square del) OK\"\n\n\n# input-square-bracketed-dup.vcf\n################################\n\n$ANNOTSV/bin/AnnotSV -SVinputFile \"./input/input-square-bracketed-dup.vcf\" -outputFile \"./output/category_3_square-bracketed-dup.annotated.tsv\"\n\n# tail -2 ./input/input-square-bracketed-dup.vcf\n# 2       3000    breakend_dup_a  T       ]2:5000]T       .       PASS    SVTYPE=BND;EXTRA=DUP_PAIRED;MATEID=breakend_dup_b       GT      0/0     0/1\n# 2       5000    breakend_dup_b  T       T[2:3000[       .       PASS    SVTYPE=BND;EXTRA=DUP_PAIRED;MATEID=breakend_dup_a       GT      0/0     0/1\n\nsquareResult=`$cut \"./output/category_3_square-bracketed-dup.annotated.tsv\" \"SV_length\" | tail -1 | awk 'BEGIN{ORS=\" \"; OFS=\" \"} { print $1 }'`\nif [ \"$squareResult\" != \"2000 \" ]\nthen\n        echo \"Error with category_3 (square dup)\"\n        exit 1\nfi\n\necho \"Category_3 (square dup) OK\"\n\n\n# input-square-bracketed-ins_by_gridss.vcf\n##########################################\n\n$ANNOTSV/bin/AnnotSV -SVinputFile \"./input/input-square-bracketed-ins_by_gridss.vcf\" -SVminSize 1 -outputFile \"./output/category_3_square-bracketed-ins_by_gridss.annotated.tsv\"\n\n# tail -2 ./input/input-square-bracketed-ins_by_gridss.vcf\n# 13      53040041        ins_by_gridss   T       TATATATATACACAC[13:53040042[    .       PASS    SVTYPE=BND;EXTRA=DEL_INS_FROM_GRIDSS    GT      0/0     0/1\n# 13      53040042        ins_by_gridss   A       ]13:53040041]ATATATATACACACA    .       PASS    SVTYPE=BND;EXTRA=DEL_INS_FROM_GRIDSS    GT      0/0     0/1\n\nsquareResult=`$cut \"./output/category_3_square-bracketed-ins_by_gridss.annotated.tsv\" \"SV_length\" | grep -v \"full=\" | tail -1 | awk 'BEGIN{ORS=\" \"; OFS=\" \"} { print $1 }\n'`\nif [ \"$squareResult\" != \"14 \" ]\nthen\n        echo \"Error with category_3 (square ins)\"\n        exit 1\nfi\n\necho \"Category_3 (square ins) OK\"\n\n\n# input-square-bracketed-inv.vcf\n################################\n\n$ANNOTSV/bin/AnnotSV -SVinputFile \"./input/input-square-bracketed-inv.vcf\" -outputFile \"./output/category_3_square-bracketed-inv.annotated.tsv\"\n\n# tail -2 ./input/input-square-bracketed-inv.vcf\n# 3       2999    breakend_inv_1_a        T       T]3:5000]       .       PASS    SVTYPE=BND;EXTRA=INV_PAIRED;MATEID=breakend_inv_1_b     GT      0/0     0/1\n# 3       5000    breakend_inv_1_b        T       [3:2999[T       .       PASS    SVTYPE=BND;EXTRA=INV_PAIRED;MATEID=breakend_inv_1_a     GT      0/0     0/1\nsquareResult=`$cut \"./output/category_3_square-bracketed-inv.annotated.tsv\" \"SV_length\" | tail -1 | awk 'BEGIN{ORS=\" \"; OFS=\" \"} { print $1 }'`\nif [ \"$squareResult\" != \"2001 \" ]\nthen\n        echo \"Error with category_3 (square inv)\"\n        exit 1\nfi\n\necho \"Category_3 (square inv) OK\"\n\n\n# input-square-bracketed-tra.vcf\n################################\n\n$ANNOTSV/bin/AnnotSV -SVinputFile \"./input/input-square-bracketed-tra.vcf\" -outputFile \"./output/category_3_square-bracketed-tra.annotated.tsv\"\n\n# tail -2 ./input/input-square-bracketed-tra.vcf\n# 2       321682  tra_a   T       ]13:123456]T    .       PASS    SVTYPE=BND      GT      0/0     0/1\n# 13      123456  tra_b   C       C[2:321682[     .       PASS    SVTYPE=BND      GT      0/0     0/1\n\nsquareResult=`$cut \"./output/category_3_square-bracketed-tra.annotated.tsv\" \"SV_length\" | grep -v \"full=\" | tail -1 | awk 'BEGIN{ORS=\" \"; OFS=\" \"} { print $1 }'`\nif [ \"$squareResult\" != \"0 \" ]\nthen\n        echo \"Error with category_3 (square tra)\"\n        exit 1\nfi\necho \"Category_3 (square tra) OK\"\n\n\n########################\n# Category 4 -\n# VCF: REF=A ALT=ATTCGTT\n########################\n\n# ...Ajouter un exemple\n\n\n\n\n###########################################\n# Category 5 -\n# BED: CHROM POS END ... (0-based notation)\n###########################################\n\n\n# input-del.bed\n###############\n\n$ANNOTSV/bin/AnnotSV -SVinputFile \"./input/input-del.bed\" -svtBEDcol 5 -outputFile \"./output/category_5_BED-del.annotated.tsv\"\n\n# tail -1 ./input/input-del.bed\n# 12      2999    5000    breakend_del_1_a        DEL\n\nBEDresult=`$cut \"./output/category_5_BED-del.annotated.tsv\" \"SV_length\" | tail -1 | awk 'BEGIN{ORS=\" \"; OFS=\" \"} { print $1}'`\nif [ \"$BEDresult\" != \"-2001 \" ]\nthen\n        echo \"Error with category_5 (BED del)\"\n        exit 1\nfi\n\necho \"Category_5 (BED del) OK\"\n\n\n# input-dup.bed\n###############\n\n$ANNOTSV/bin/AnnotSV -SVinputFile \"./input/input-dup.bed\" -svtBEDcol 5 -outputFile \"./output/category_5_BED-dup.annotated.tsv\"\n\n# tail -1 ./input/input-dup.bed\n# 2       2999    5000    breakend_dup_a  DUP\n\nBEDresult=`$cut \"./output/category_5_BED-dup.annotated.tsv\" \"SV_length\" | tail -1 | awk 'BEGIN{ORS=\" \"; OFS=\" \"} { print $1 }'`\nif [ \"$BEDresult\" != \"2001 \" ]\nthen\n        echo \"Error with category_5 (BED dup)\"\n        exit 1\nfi\n\necho \"Category_5 (BED dup) OK\"\n\n\n# input-ins_by_gridss.bed\n#########################\n\n$ANNOTSV/bin/AnnotSV -SVinputFile \"./input/input-ins_by_gridss.bed\" -svtBEDcol 5 -outputFile \"./output/category_5_BED-ins_by_gridss.annotated.tsv\"\n\n\n# tail -1 ./input/input-ins_by_gridss.bed\n# 13      53040040        53040041        ns_by_gridss    INS     ATATATATACACAC\n\nBEDresult=`$cut \"./output/category_5_BED-ins_by_gridss.annotated.tsv\" \"SV_length\" | grep -v \"full=\" | tail -1 | awk 'BEGIN{ORS=\" \"; OFS=\" \"} { print $1 }'`\nif [ \"$BEDresult\" != \" \" ]\nthen\n        echo \"Error with category_5 (BED ins)\"\n        exit 1\nfi\n\necho \"Category_5 (BED ins) OK\"\n\n\n# input-inv.bed\n###############\n\n$ANNOTSV/bin/AnnotSV -SVinputFile \"./input/input-inv.bed\" -svtBEDcol 5 -outputFile \"./output/category_5_BED-inv.annotated.tsv\"\n\n# tail -1 ./input/input-inv.bed\n# 3       2998    5000    breakend_inv_1_a        INV\n\nBEDresult=`$cut \"./output/category_5_BED-inv.annotated.tsv\" \"SV_length\" | tail -1 | awk 'BEGIN{ORS=\" \"; OFS=\" \"} { print $1 }'`\nif [ \"$BEDresult\" != \"2002 \" ]\nthen\n        echo \"Error with category_5 (BED inv)\"\n        exit 1\nfi\n\necho \"Category_5 (BED inv) OK\"\n\n\n# input-tra.bed\n###############\n\n$ANNOTSV/bin/AnnotSV -SVinputFile \"./input/input-tra.bed\" -svtBEDcol 5 -outputFile \"./output/category_5_BED-tra.annotated.tsv\"\n\n# tail -2 ./input/input-tra.bed\n# 2       321681  321682  tra_a   TRA\n# 13      123455  123456  tra_b   TRA\n\nBEDresult=`$cut \"./output/category_5_BED-tra.annotated.tsv\" \"SV_length\" | grep -v \"full=\" | tail -1 | awk 'BEGIN{ORS=\" \"; OFS=\" \"} { print $1 }'`\nif [ \"$BEDresult\" != \"0 \" ]\nthen\n        echo \"Error with category_5 (BED tra)\"\n        exit 1\nfi\necho \"Category_5 (BED tra) OK\"\n\n################################################################\n################################################################\n################################################################\n\necho \"ok - Finished\"\n\n\n"
  },
  {
    "path": "tests/AnnotSV/test_37_SVLEN/input/input-angle-bracketed-del.vcf",
    "content": "#CHROM\tPOS\tID\tREF\tALT\tQUAL\tFILTER\tINFO\tFORMAT\tNORMAL\tTUMOR\n12\t3000\tbreakend_del_1_a\tT\t<DEL>\t.\tPASS\tEND=5000;EXTRA=DEL_PAIRED;MATEID=breakend_del_1_b\tGT\t0/0\t0/1\n"
  },
  {
    "path": "tests/AnnotSV/test_37_SVLEN/input/input-angle-bracketed-dup.vcf",
    "content": "#CHROM\tPOS\tID\tREF\tALT\tQUAL\tFILTER\tINFO\tFORMAT\tNORMAL\tTUMOR\n2\t3000\tbreakend_dup_a\tT\t<DUP>\t.\tPASS\tEND=5000EXTRA=DUP_PAIRED;MATEID=breakend_dup_b\tGT\t0/0\t0/1\n"
  },
  {
    "path": "tests/AnnotSV/test_37_SVLEN/input/input-angle-bracketed-inv.vcf",
    "content": "#CHROM\tPOS\tID\tREF\tALT\tQUAL\tFILTER\tINFO\tFORMAT\tNORMAL\tTUMOR\n3\t2999\tbreakend_inv_1_a\tT\t<INV>\t.\tPASS\tEND=5000;EXTRA=INV_PAIRED;MATEID=breakend_inv_1_b\tGT\t0/0\t0/1\n"
  },
  {
    "path": "tests/AnnotSV/test_37_SVLEN/input/input-angle-bracketed-tra.vcf",
    "content": "#CHROM\tPOS\tID\tREF\tALT\tQUAL\tFILTER\tINFO\tFORMAT\tNORMAL\tTUMOR\n2\t321682\ttra_a\tT\t<TRA>\t.\tPASS\tSVTYPE=BND;CHR2=13;END=123456\tGT\t0/0\t0/1\n13\t123456\ttra_b\tC\t<TRA>\t.\tPASS\tSVTYPE=BND;CHR2=2;END=321682\tGT\t0/0\t0/1\n"
  },
  {
    "path": "tests/AnnotSV/test_37_SVLEN/input/input-del.bed",
    "content": "12\t2999\t5000\tbreakend_del_1_a\tDEL\n"
  },
  {
    "path": "tests/AnnotSV/test_37_SVLEN/input/input-dup.bed",
    "content": "2\t2999\t5000\tbreakend_dup_a\tDUP\n"
  },
  {
    "path": "tests/AnnotSV/test_37_SVLEN/input/input-ins_by_gridss.bed",
    "content": "13\t53040040\t53040041\tns_by_gridss\tINS\tATATATATACACAC \n"
  },
  {
    "path": "tests/AnnotSV/test_37_SVLEN/input/input-inv.bed",
    "content": "3\t2998\t5000\tbreakend_inv_1_a\tINV\n"
  },
  {
    "path": "tests/AnnotSV/test_37_SVLEN/input/input-square-bracketed-del.vcf",
    "content": "#CHROM\tPOS\tID\tREF\tALT\tQUAL\tFILTER\tINFO\tFORMAT\tNORMAL\tTUMOR\n12\t3000\tbreakend_del_1_a\tT\tT[12:5000[\t.\tPASS\tSVTYPE=BND;EXTRA=DEL_PAIRED;MATEID=breakend_del_1_b\tGT\t0/0\t0/1\n12\t5000\tbreakend_del_1_b\tT\t]12:3000]T\t.\tPASS\tSVTYPE=BND;EXTRA=DEL_PAIRED;MATEID=breakend_del_1_a\tGT\t0/0\t0/1\n"
  },
  {
    "path": "tests/AnnotSV/test_37_SVLEN/input/input-square-bracketed-dup.vcf",
    "content": "#CHROM\tPOS\tID\tREF\tALT\tQUAL\tFILTER\tINFO\tFORMAT\tNORMAL\tTUMOR\n2\t3000\tbreakend_dup_a\tT\t]2:5000]T\t.\tPASS\tSVTYPE=BND;EXTRA=DUP_PAIRED;MATEID=breakend_dup_b\tGT\t0/0\t0/1\n2\t5000\tbreakend_dup_b\tT\tT[2:3000[\t.\tPASS\tSVTYPE=BND;EXTRA=DUP_PAIRED;MATEID=breakend_dup_a\tGT\t0/0\t0/1\n"
  },
  {
    "path": "tests/AnnotSV/test_37_SVLEN/input/input-square-bracketed-ins_by_gridss.vcf",
    "content": "#CHROM\tPOS\tID\tREF\tALT\tQUAL\tFILTER\tINFO\tFORMAT\tNORMAL\tTUMOR\n13\t53040041\tins_by_gridss\tT\tTATATATATACACAC[13:53040042[\t.\tPASS\tSVTYPE=BND;EXTRA=DEL_INS_FROM_GRIDSS\tGT\t0/0\t0/1\n13\t53040042\tins_by_gridss\tA\t]13:53040041]ATATATATACACACA\t.\tPASS\tSVTYPE=BND;EXTRA=DEL_INS_FROM_GRIDSS\tGT\t0/0\t0/1\n"
  },
  {
    "path": "tests/AnnotSV/test_37_SVLEN/input/input-square-bracketed-inv.vcf",
    "content": "#CHROM\tPOS\tID\tREF\tALT\tQUAL\tFILTER\tINFO\tFORMAT\tNORMAL\tTUMOR\n3\t2999\tbreakend_inv_1_a\tT\tT]3:5000]\t.\tPASS\tSVTYPE=BND;EXTRA=INV_PAIRED;MATEID=breakend_inv_1_b\tGT\t0/0\t0/1\n3\t5000\tbreakend_inv_1_b\tT\t[3:2999[T\t.\tPASS\tSVTYPE=BND;EXTRA=INV_PAIRED;MATEID=breakend_inv_1_a\tGT\t0/0\t0/1\n"
  },
  {
    "path": "tests/AnnotSV/test_37_SVLEN/input/input-square-bracketed-tra.vcf",
    "content": "##fileformat=VCFv4.1\n##contig=<ID=1,length=249250621>\n##contig=<ID=2,length=243199373>\n##contig=<ID=3,length=198022430>\n##contig=<ID=4,length=191154276>\n##contig=<ID=5,length=180915260>\n##contig=<ID=6,length=171115067>\n##contig=<ID=7,length=159138663>\n##contig=<ID=8,length=146364022>\n##contig=<ID=9,length=141213431>\n##contig=<ID=10,length=135534747>\n##contig=<ID=11,length=135006516>\n##contig=<ID=12,length=133851895>\n##contig=<ID=13,length=115169878>\n##contig=<ID=14,length=107349540>\n##contig=<ID=15,length=102531392>\n##contig=<ID=16,length=90354753>\n##contig=<ID=17,length=81195210>\n##contig=<ID=18,length=78077248>\n##contig=<ID=19,length=59128983>\n##contig=<ID=20,length=63025520>\n##contig=<ID=21,length=48129895>\n##contig=<ID=22,length=51304566>\n##contig=<ID=X,length=155270560>\n##contig=<ID=Y,length=59373566>\n##FORMAT=<ID=GT,Number=1,Type=String,Description=\"Genotype\">\n##FORMAT=<ID=AD,Number=R,Type=Integer,Description=\"Allelic depths for the ref and alt alleles in the order listed\">\n##INFO=<ID=SVLEN,Number=1,Type=Integer,Description=\"Length of the SV\">\n##INFO=<ID=SVTYPE,Number=1,Type=String,Description=\"Type of the SV\">\n##INFO=<ID=SUPP_SEQ,Number=.,Type=String,Description=\"Vector of supporting technologies\">\n##INFO=<ID=SUPP_VAL,Number=.,Type=String,Description=\"Vector of supporting technologies\">\n##INFO=<ID=GENE,Number=.,Type=String,Description=\"Gene(s) overlap in breakpoint\">\n##INFO=<ID=CLUSTER,Number=.,Type=String,Description=\"IDs of other clustered breakpoints\">\n##INFO=<ID=EXTRA,Number=.,Type=String,Description=\"Extra info for testing\">\n##INFO=<ID=END,Number=1,Type=Integer,Description=\"End position of the variant described in this record\">\n#CHROM\tPOS\tID\tREF\tALT\tQUAL\tFILTER\tINFO\tFORMAT\tNORMAL\tTUMOR\n2\t321682\ttra_a\tT\t]13:123456]T\t.\tPASS\tSVTYPE=BND\tGT\t0/0\t0/1\n13\t123456\ttra_b\tC\tC[2:321682[\t.\tPASS\tSVTYPE=BND\tGT\t0/0\t0/1\n"
  },
  {
    "path": "tests/AnnotSV/test_37_SVLEN/input/input-tra.bed",
    "content": "2\t321681\t321682\ttra_a\tTRA\n13\t123455\t123456\ttra_b\tTRA\n"
  },
  {
    "path": "tests/AnnotSV/test_38_samePosINSwithDiffInsertedSeq/README",
    "content": "##############################################################################################\n#\n#                                         INSERTIONS\n#\n##############################################################################################\n\n\n# List of the different \"tags/flags\" used in the VCF INFO column to specify the inserted sequence\n#################################################################################################\n\n=> INS, INSERTED_SEQUENCE, SVINSSEQ, INSSEQ, SEQ, CONSENSUS\n\n\n# GATK, ANNOVAR\nINS=ACG \n\n# tools derived from Mutalyzer\nINSERTED_SEQUENCE=ACG\n\n# Manta\nSVINSLEN\nSVINSSEQ\nLEFT_SVINSSEQ\nRIGHT_SVINSSEQ\n\n# DRAGEN (Illumina)\nSVINSSEQ\nSVINSLEN\n\n# Severus\nINSSEQ\n\n# Sniffles2\nSEQ\t\t\tSniffles2\n\n# some long-read custom pipelines\nCONSENSUS\tconsensus sequence de l’insertion\n\n# bcftools\naccept SVINSSEQ\n\n\n\n\n# Tests with 2 INS that have the same position but different SVLENs\n###################################################################\n\n# chr18   1963003 cuteSV.INS.4743 .       <INS>   19      PASS    SVLEN=1512;SVTYPE=INS;CHR2=chr18;END=1963003    GT      0/1\n# chr18   1963003 cuteSV.INS.4744 .       <INS>   50      PASS    SVLEN=51;SVTYPE=INS;CHR2=chr18;END=1963003      GT      0/1\ntime $ANNOTSVDEV/bin/AnnotSV -SVinputFile test_INS_1.vcf -outputFile ./output/test_INS_1.annotated.tsv\n\ncut -f 1 ./test_INS_1.annotated.tsv\nAnnotSV_ID\n18_1963003_1963003_INS_1\n18_1963003_1963003_INS_2\n=> Ok\n\n\n# Tests with 2 INS that have the same position but different inserted sequences\n###############################################################################\n\n# chr18   1963003 cuteSV.INS.4743 .       <INS>   19      PASS    SVTYPE=INS;CHR2=chr18;END=1963003;SVINSSEQ=ATGTGTAATGCCGTATGCTTGTAATGCCGTATGCTTGTAATGCCGTATGCTTGAAAACCGT        GT      0/1\n# chr18   1963003 cuteSV.INS.4744 .       <INS>   50      PASS    SVTYPE=INS;CHR2=chr18;END=1963003;SVINSSEQ=ATGCTTGTAATGCCGTATGCTTGTAATGCCGTATGCTTGTAATGCCGTATGCTTGTAATGCCGT     GT      0/1\ntime $ANNOTSVDEV/bin/AnnotSV -SVinputFile test_INS_2.vcf -outputFile ./output/test_INS_2.annotated.tsv\n\ncut -f 1 ./test_INS_2.annotated.tsv\nAnnotSV_ID\n18_1963003_1963003_INS_1\n18_1963003_1963003_INS_2\n=> Ok\n\n\n# chr2    79197378        oo      A       AATATGCTTGTAATGCCGTATGCTTGTAATGCCGTATGCTTGTAATGCCGTATGCTTGTAATGCCGT[chr2:79198779[      352     PASS    SVTYPE=BND      GT:FT   0/1:PASS\n# chr2    79197378        pp      A       AATATGCTTGTAATGCCGTATGCTTGTAATGCCGTATGCTTGTAATGCCGTATGCTTGTAATGCCGTTAATGCCGTATGCTTGTAAT[chr2:79198779[  352     PASS    SVTYPE=BND      GT:FT   0/1:PASS\ntime $ANNOTSVDEV/bin/AnnotSV -SVinputFile test_INS_3.vcf -outputFile ./output/test_INS_3.annotated.tsv\n\ncut -f 1,16 ./test_INS_3.annotated.tsv | gr full\n2_79197378_79198779_DEL_1       full\n2_79197378_79198779_DEL_2       full\n=> Ok\n\n\n\n\n\n"
  },
  {
    "path": "tests/AnnotSV/test_38_samePosINSwithDiffInsertedSeq/command_Tcl.sh",
    "content": "#!/bin/bash -x\n\nset -eo pipefail\n\n###################################################################\n####                                                           ####\n####       Check the AnnotSV_ID for INS with same POS          ####\n####                                                           ####\n###################################################################\n\nmkdir -p ./output\nrm -f ./output/*.annotated.tsv\n\n\ncut=\"$ANNOTSV/tests/AnnotSV/scripts/cutWithColumnNames.tcl\"\n\n\n# Tests with 2 INS that have the same position but different SVLENs\n###################################################################\n\n$ANNOTSV/bin/AnnotSV -SVinputFile \"./input/test_INS_1.vcf\" -outputFile \"./output/test_INS_1.annotated.tsv\"\n\nresult=`$cut \"./output/test_INS_1.annotated.tsv\" \"AnnotSV_ID\" | awk 'BEGIN{ORS=\" \"; OFS=\" \"} { print $1 }'`\nif [ \"$result\" != \"AnnotSV_ID 18_1963003_1963003_INS_1 18_1963003_1963003_INS_2 \" ]\nthen\n        echo \"Error with test_INS_1\"\n        exit 1\nfi\n\necho \"test_INS_1 OK\"\n\n\n# Tests with 2 INS that have the same position but different inserted sequences\n###############################################################################\n\n# angular bracketed ALT\n$ANNOTSV/bin/AnnotSV -SVinputFile \"./input/test_INS_2.vcf\" -outputFile \"./output/test_INS_2.annotated.tsv\"\n\nresult=`$cut \"./output/test_INS_2.annotated.tsv\" \"AnnotSV_ID\" | awk 'BEGIN{ORS=\" \"; OFS=\" \"} { print $1 }'`\nif [ \"$result\" != \"AnnotSV_ID 18_1963003_1963003_INS_1 18_1963003_1963003_INS_2 \" ]\nthen\n        echo \"Error with test_INS_2\"\n        exit 1\nfi\n\necho \"test_INS_2 OK\"\n\n\n# square bracketed ALT\n$ANNOTSVDEV/bin/AnnotSV -SVinputFile \"./input/test_INS_3.vcf\" -outputFile \"./output/test_INS_3.annotated.tsv\"\n\nresult=`$cut \"./output/test_INS_3.annotated.tsv\" \"AnnotSV_ID;Annotation_mode\" | grep \"full\"  | awk 'BEGIN{ORS=\" \"; OFS=\" \"} { print $1 }'`\nif [ \"$result\" != \"2_79197378_79197378_INS_1 2_79197378_79197378_INS_2 \" ]\nthen\n        echo \"Error with test_INS_3\"\n        exit 1\nfi\n\necho \"test_INS_3 OK\"\n\n\n################################################################\n################################################################\n################################################################\n\necho \"ok - Finished\"\n\n"
  },
  {
    "path": "tests/AnnotSV/test_38_samePosINSwithDiffInsertedSeq/input/test_INS_1.vcf",
    "content": "#CHROM\tPOS\tID\tREF\tALT\tQUAL\tFILTER\tINFO\tFORMAT\nchr18\t1963003\tcuteSV.INS.4743\t.\t<INS>\t19\tPASS\tSVLEN=1512;SVTYPE=INS;CHR2=chr18;END=1963003\tGT\t0/1\nchr18\t1963003\tcuteSV.INS.4744\t.\t<INS>\t50\tPASS\tSVLEN=51;SVTYPE=INS;CHR2=chr18;END=1963003\tGT\t0/1\n"
  },
  {
    "path": "tests/AnnotSV/test_38_samePosINSwithDiffInsertedSeq/input/test_INS_2.vcf",
    "content": "#CHROM\tPOS\tID\tREF\tALT\tQUAL\tFILTER\tINFO\tFORMAT\nchr18\t1963003\tcuteSV.INS.4743\t.\t<INS>\t19\tPASS\tSVTYPE=INS;CHR2=chr18;END=1963003;SVINSSEQ=ATGTGTAATGCCGTATGCTTGTAATGCCGTATGCTTGTAATGCCGTATGCTTGAAAACCGT\tGT\t0/1\nchr18\t1963003\tcuteSV.INS.4744\t.\t<INS>\t50\tPASS\tSVTYPE=INS;CHR2=chr18;END=1963003;SVINSSEQ=ATGCTTGTAATGCCGTATGCTTGTAATGCCGTATGCTTGTAATGCCGTATGCTTGTAATGCCGT\tGT\t0/1\n"
  },
  {
    "path": "tests/AnnotSV/test_38_samePosINSwithDiffInsertedSeq/input/test_INS_3.vcf",
    "content": "##fileformat=VCFv4.1\n##reference=hg38\n##contig=<ID=chr2,length=242193529>\n##INFO=<ID=SVTYPE,Number=1,Type=String,Description=\"Type of structural variant\">\n##FORMAT=<ID=GT,Number=1,Type=String,Description=\"Genotype\">\n#CHROM\tPOS\tID\tREF\tALT\tQUAL\tFILTER\tINFO\tFORMAT\tmanta\nchr2\t79197378\too\tA\tAATATGCTTGTAATGCCGTATGCTTGTAATGCCGTATGCTTGTAATGCCGTATGCTTGTAATGCCGT[chr2:79197379[\t352\tPASS\tSVTYPE=BND\tGT:FT\t0/1:PASS\nchr2\t79197378\tpp\tA\tAATATGCTTGTAATGCCGTATGCTTGTAATGCCGTATGCTTGTAATGCCGTATGCTTGTAATGCCGTTAATGCCGTATGCTTGTAAT[chr2:79197379[\t352\tPASS\tSVTYPE=BND\tGT:FT\t0/1:PASS\n"
  },
  {
    "path": "tests/AnnotSV/test_38_samePosINSwithDiffInsertedSeq/test_INS_1.annotated.tsv",
    "content": "AnnotSV_ID\tSV_chrom\tSV_start\tSV_end\tSV_length\tSV_type\tSamples_ID\tID\tREF\tALT\tQUAL\tFILTER\tINFO\tFORMAT\tAnnotation_mode\tCytoBand\tGene_name\tClosest_left\tClosest_right\tGene_count\tTx\tTx_version\tTx_start\tTx_end\tOverlapped_tx_length\tOverlapped_CDS_length\tOverlapped_CDS_percent\tFrameshift\tExon_count\tLocation\tLocation2\tDist_nearest_SS\tNearest_SS_type\tIntersect_start\tIntersect_end\tRE_gene\tP_gain_phen\tP_gain_hpo\tP_gain_source\tP_gain_coord\tP_loss_phen\tP_loss_hpo\tP_loss_source\tP_loss_coord\tP_ins_phen\tP_ins_hpo\tP_ins_source\tP_ins_coord\tpo_P_gain_phen\tpo_P_gain_hpo\tpo_P_gain_source\tpo_P_gain_coord\tpo_P_gain_percent\tpo_P_loss_phen\tpo_P_loss_hpo\tpo_P_loss_source\tpo_P_loss_coord\tpo_P_loss_percent\tP_snvindel_nb\tP_snvindel_phen\tB_gain_source\tB_gain_coord\tB_gain_AFmax\tB_loss_source\tB_loss_coord\tB_loss_AFmax\tB_ins_source\tB_ins_coord\tB_ins_AFmax\tB_inv_source\tB_inv_coord\tB_inv_AFmax\tpo_B_gain_allG_source\tpo_B_gain_allG_coord\tpo_B_gain_someG_source\tpo_B_gain_someG_coord\tpo_B_loss_allG_source\tpo_B_loss_allG_coord\tpo_B_loss_someG_source\tpo_B_loss_someG_coord\tGC_content_left\tGC_content_right\tRepeat_coord_left\tRepeat_type_left\tRepeat_coord_right\tRepeat_type_right\tGap_left\tGap_right\tSegDup_left\tSegDup_right\tENCODE_blacklist_left\tENCODE_blacklist_characteristics_left\tENCODE_blacklist_right\tENCODE_blacklist_characteristics_right\tACMG\tHI\tTS\tDDD_HI_percent\tExAC_delZ\tExAC_dupZ\tExAC_cnvZ\tExAC_synZ\tExAC_misZ\tGenCC_disease\tGenCC_moi\tGenCC_classification\tGenCC_pmid\tNCBI_gene_ID\tHGNC_gene_ID\tOMIM_ID\tOMIM_phenotype\tOMIM_inheritance\tOMIM_morbid\tOMIM_morbid_candidate\tLOEUF_bin\tGnomAD_pLI\tExAC_pLI\tAnnotSV_ranking_score\tAnnotSV_ranking_criteria\tACMG_class\n18_1963003_1963003_INS_1\t18\t1963003\t1963003\t1512\tINS\t\tcuteSV.INS.4743\t.\t<INS>_1512\t19\tPASS\tSVLEN=1512;SVTYPE=INS;CHR2=18;END=1963003\tGT\tfull\tp11.32\t\tLOC105371958\tLOC105371957\t0\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tdbVar:nssv15147091;dbVar:nssv17976993;dbVar:nssv15174218;dbVar:nssv15173597;dbVar:nssv15148163;dbVar:nssv17976674;dbVar:nssv15146418;dbVar:nssv15146417;dbVar:nssv15147372;dbVar:nssv15147412;dbVar:nssv15120382;dbVar:nssv15146781;dbVar:nssv17969147;dbVar:nssv15153904;dbVar:nssv15148900;dbVar:nssv15146776;nssv15149912;nssv15153905;nssv17969149;dbVar:nssv15151158;dbVar:nssv15151280;dbVar:nssv17956154;dbVar:nssv15148237;nssv17969152;dbVar:nssv15149976;dbVar:nssv15148196;nssv15150633;dbVar:nssv15148050;dbVar:nssv15147095;dbVar:nssv15133614;dbVar:nssv15145762;dbVar:nssv15146335;nssv15148275;dbVar:nssv15137988;dbVar:nssv15147988;dbVar:nssv15147431;dbVar:nssv15146963;dbVar:nssv15147830;dbVar:nssv15147673;dbVar:nssv15121122;dbVar:nssv15147569;nssv15153169;dbVar:nssv15152479;dbVar:nssv15146422\t18:10002-15380684;18:10002-80259271;18:12843-80257297;18:13035-80257297;18:14317-14206225;18:47391-14854038;18:53346-20948503;18:53346-80209986;18:118761-14089410;18:118761-80254946;18:131501-4421014;18:136227-14337134;18:136227-14384327;18:136227-15157837;18:136227-15175006;18:136227-15198991;18:136227-20941324;18:136227-24077826;18:136227-27672312;18:136227-80256240;18:136228-48644682;18:136228-80256240;18:148964-14081888;18:148964-21040153;18:148964-2221286;18:148964-80244381;18:148964-80252149;18:149090-5458472;18:149090-80234391;18:149090-80254936;18:163324-15102599;18:163324-80247302;18:163324-80247353;18:180231-4199943;18:416491-8638372;18:958974-15181667;18:1919685-15325188\t0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00\t\t\tdbVar:nssv15150750;dbVar:nssv18792749;dbVar:nssv18326322;dbVar:nssv17955800;dbVar:nssv15151907;dbVar:nssv16208662;dbVar:nssv15151600;dbVar:nssv15130561;dbVar:nssv15128089;dbVar:nssv15127405;dbVar:nssv15128420;dbVar:nssv15147574;dbVar:nssv15147565;dbVar:nssv15148923;dbVar:nssv15134419;dbVar:nssv17650012;dbVar:nssv15137462;dbVar:nssv15146527;dbVar:nssv15146463;dbVar:nssv15146728;dbVar:nssv15147522;dbVar:nssv15134538;dbVar:nssv15137735;dbVar:nssv15136586;dbVar:nssv15148875;dbVar:nssv15174219;dbVar:nssv15147189;dbVar:nssv15147175;dbVar:nssv15146528;dbVar:nssv15121941;dbVar:nssv15145886;dbVar:nssv15152476;dbVar:nssv17976907;dbVar:nssv15155582;dbVar:nssv17969146;dbVar:nssv16208985;dbVar:nssv17977099;dbVar:nssv17969148;dbVar:nssv15150379;dbVar:nssv16208986;dbVar:nssv15152480;dbVar:nssv15151881;nssv17969150;dbVar:nssv16208516;dbVar:nssv15138130;dbVar:nssv16255074;dbVar:nssv16208981;dbVar:nssv15137029;dbVar:nssv15139629;dbVar:nssv15152473;dbVar:nssv15141983;dbVar:nssv16208512;dbVar:nssv17969145;dbVar:nssv17976908;dbVar:nssv15156230;dbVar:nssv18329625;dbVar:nssv18330775;dbVar:nssv16208515;dbVar:nssv15148109;dbVar:nssv15146561;dbVar:nssv15146560;dbVar:nssv15145673;dbVar:nssv15145680;nssv15146802;dbVar:nssv15135459;dbVar:nssv15133988;dbVar:nssv15136818;dbVar:nssv18841839;dbVar:nssv15149109;dbVar:nssv15148103;dbVar:nssv16208513;dbVar:nssv15148944;dbVar:nssv16208514;dbVar:nssv17955847\t18:10002-15157837;18:10002-15400036;18:10002-8638262;18:10502-15410399;18:13035-15026310;18:13035-15330526;18:13035-15375879;18:14276-12811388;18:14276-13649734;18:14276-20949945;18:14276-8779843;18:14317-10784608;18:14317-15328500;18:48783-14978076;18:53345-7029134;18:64997-6838316;18:85433-7094700;18:112260-14122522;18:112260-9135777;18:118761-14089410;18:118761-15024003;18:118761-4342182;18:118761-4470508;18:118761-6275718;18:118761-8999132;18:124336-14139007;18:131701-10536767;18:131701-14226905;18:131701-15121055;18:131701-3279166;18:133158-14089410;18:136227-10074736;18:136227-10172944;18:136227-12767080;18:136227-13655147;18:136227-13894430;18:136227-14632437;18:136227-14983939;18:136227-15157837;18:136227-15175006;18:136227-15198990;18:136227-15198991;18:136227-20949617;18:136227-2994136;18:136227-3415480;18:136227-3502495;18:136227-4002983;18:136227-4802275;18:136227-4925311;18:136227-5323942;18:136227-5407840;18:136227-6103500;18:136227-7131133;18:136227-8057396;18:136228-11283185;18:136228-7218596;18:136305-15143715;18:148964-10900517;18:148964-13068104;18:148964-13530126;18:148964-13715860;18:148964-14081888;18:148964-2313458;18:148964-6086668;18:149090-5276567;18:158287-14124574;18:163324-14103972;18:180230-10762632;18:544118-5679225;18:958975-11954935;18:971295-11250448;18:1262334-55587520\t0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00\t\t\tdbVar\tchr18:1723989-2065652\t0.01\tDDD:50513;DDD:50515;dbVar;esv2656686\t18:1902886-1980786;chr18:1903085-1984841;chr18:1903091-1984846;18:1904022-1983773;chr18:1906570-1985565;chr18:1921454-1985565;18:1962720-1963078\t0.0213\tHPRC:pbsv.INS.214;HPRC:pbsv.INS.215;PacBioCoLoRS\tchr18:1963003-1963003;chr18:1963003-1963003;18:1963003-1963003\t0.2324\tIMH\t18:113217-20958919\t0.1200\t\t\tchr18:1723989-2065652 dbVar\tchr18:1723989-2065652 dbVar\t\t\tchr18:1903085-1984841 dbVar;18:1904022-1983773 DDD:50515;chr18:1921454-1985565 dbVar;18:1902886-1980786 DDD:50513;chr18:1903091-1984846 dbVar;chr18:1906570-1985565 dbVar;18:1962720-1963078 esv2656686\t18:1902886-1980786 DDD:50513;chr18:1903091-1984846 dbVar;chr18:1906570-1985565 dbVar;18:1962720-1963078 esv2656686;chr18:1903085-1984841 dbVar;18:1904022-1983773 DDD:50515;chr18:1921454-1985565 dbVar\t0.240\t0.235\t18:1962555-1963239\t(TA)n\t18:1962555-1963239\t(TA)n\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tNA\n18_1963003_1963003_INS_2\t18\t1963003\t1963003\t51\tINS\t\tcuteSV.INS.4744\t.\t<INS>_51\t50\tPASS\tSVLEN=51;SVTYPE=INS;CHR2=18;END=1963003\tGT\tfull\tp11.32\t\tLOC105371958\tLOC105371957\t0\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tdbVar:nssv15147091;dbVar:nssv17976993;dbVar:nssv15174218;dbVar:nssv15173597;dbVar:nssv15148163;dbVar:nssv17976674;dbVar:nssv15146418;dbVar:nssv15146417;dbVar:nssv15147372;dbVar:nssv15147412;dbVar:nssv15120382;dbVar:nssv15146781;dbVar:nssv17969147;dbVar:nssv15153904;dbVar:nssv15148900;dbVar:nssv15146776;nssv15149912;nssv15153905;nssv17969149;dbVar:nssv15151158;dbVar:nssv15151280;dbVar:nssv17956154;dbVar:nssv15148237;nssv17969152;dbVar:nssv15149976;dbVar:nssv15148196;nssv15150633;dbVar:nssv15148050;dbVar:nssv15147095;dbVar:nssv15133614;dbVar:nssv15145762;dbVar:nssv15146335;nssv15148275;dbVar:nssv15137988;dbVar:nssv15147988;dbVar:nssv15147431;dbVar:nssv15146963;dbVar:nssv15147830;dbVar:nssv15147673;dbVar:nssv15121122;dbVar:nssv15147569;nssv15153169;dbVar:nssv15152479;dbVar:nssv15146422\t18:10002-15380684;18:10002-80259271;18:12843-80257297;18:13035-80257297;18:14317-14206225;18:47391-14854038;18:53346-20948503;18:53346-80209986;18:118761-14089410;18:118761-80254946;18:131501-4421014;18:136227-14337134;18:136227-14384327;18:136227-15157837;18:136227-15175006;18:136227-15198991;18:136227-20941324;18:136227-24077826;18:136227-27672312;18:136227-80256240;18:136228-48644682;18:136228-80256240;18:148964-14081888;18:148964-21040153;18:148964-2221286;18:148964-80244381;18:148964-80252149;18:149090-5458472;18:149090-80234391;18:149090-80254936;18:163324-15102599;18:163324-80247302;18:163324-80247353;18:180231-4199943;18:416491-8638372;18:958974-15181667;18:1919685-15325188\t0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00\t\t\tdbVar:nssv15150750;dbVar:nssv18792749;dbVar:nssv18326322;dbVar:nssv17955800;dbVar:nssv15151907;dbVar:nssv16208662;dbVar:nssv15151600;dbVar:nssv15130561;dbVar:nssv15128089;dbVar:nssv15127405;dbVar:nssv15128420;dbVar:nssv15147574;dbVar:nssv15147565;dbVar:nssv15148923;dbVar:nssv15134419;dbVar:nssv17650012;dbVar:nssv15137462;dbVar:nssv15146527;dbVar:nssv15146463;dbVar:nssv15146728;dbVar:nssv15147522;dbVar:nssv15134538;dbVar:nssv15137735;dbVar:nssv15136586;dbVar:nssv15148875;dbVar:nssv15174219;dbVar:nssv15147189;dbVar:nssv15147175;dbVar:nssv15146528;dbVar:nssv15121941;dbVar:nssv15145886;dbVar:nssv15152476;dbVar:nssv17976907;dbVar:nssv15155582;dbVar:nssv17969146;dbVar:nssv16208985;dbVar:nssv17977099;dbVar:nssv17969148;dbVar:nssv15150379;dbVar:nssv16208986;dbVar:nssv15152480;dbVar:nssv15151881;nssv17969150;dbVar:nssv16208516;dbVar:nssv15138130;dbVar:nssv16255074;dbVar:nssv16208981;dbVar:nssv15137029;dbVar:nssv15139629;dbVar:nssv15152473;dbVar:nssv15141983;dbVar:nssv16208512;dbVar:nssv17969145;dbVar:nssv17976908;dbVar:nssv15156230;dbVar:nssv18329625;dbVar:nssv18330775;dbVar:nssv16208515;dbVar:nssv15148109;dbVar:nssv15146561;dbVar:nssv15146560;dbVar:nssv15145673;dbVar:nssv15145680;nssv15146802;dbVar:nssv15135459;dbVar:nssv15133988;dbVar:nssv15136818;dbVar:nssv18841839;dbVar:nssv15149109;dbVar:nssv15148103;dbVar:nssv16208513;dbVar:nssv15148944;dbVar:nssv16208514;dbVar:nssv17955847\t18:10002-15157837;18:10002-15400036;18:10002-8638262;18:10502-15410399;18:13035-15026310;18:13035-15330526;18:13035-15375879;18:14276-12811388;18:14276-13649734;18:14276-20949945;18:14276-8779843;18:14317-10784608;18:14317-15328500;18:48783-14978076;18:53345-7029134;18:64997-6838316;18:85433-7094700;18:112260-14122522;18:112260-9135777;18:118761-14089410;18:118761-15024003;18:118761-4342182;18:118761-4470508;18:118761-6275718;18:118761-8999132;18:124336-14139007;18:131701-10536767;18:131701-14226905;18:131701-15121055;18:131701-3279166;18:133158-14089410;18:136227-10074736;18:136227-10172944;18:136227-12767080;18:136227-13655147;18:136227-13894430;18:136227-14632437;18:136227-14983939;18:136227-15157837;18:136227-15175006;18:136227-15198990;18:136227-15198991;18:136227-20949617;18:136227-2994136;18:136227-3415480;18:136227-3502495;18:136227-4002983;18:136227-4802275;18:136227-4925311;18:136227-5323942;18:136227-5407840;18:136227-6103500;18:136227-7131133;18:136227-8057396;18:136228-11283185;18:136228-7218596;18:136305-15143715;18:148964-10900517;18:148964-13068104;18:148964-13530126;18:148964-13715860;18:148964-14081888;18:148964-2313458;18:148964-6086668;18:149090-5276567;18:158287-14124574;18:163324-14103972;18:180230-10762632;18:544118-5679225;18:958975-11954935;18:971295-11250448;18:1262334-55587520\t0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00\t\t\tdbVar\tchr18:1723989-2065652\t0.01\tDDD:50513;DDD:50515;dbVar;esv2656686\t18:1902886-1980786;chr18:1903085-1984841;chr18:1903091-1984846;18:1904022-1983773;chr18:1906570-1985565;chr18:1921454-1985565;18:1962720-1963078\t0.0213\tHPRC:pbsv.INS.214;HPRC:pbsv.INS.215;PacBioCoLoRS\tchr18:1963003-1963003;chr18:1963003-1963003;18:1963003-1963003\t0.2324\tIMH\t18:113217-20958919\t0.1200\t\t\tchr18:1723989-2065652 dbVar\tchr18:1723989-2065652 dbVar\t\t\tchr18:1903085-1984841 dbVar;18:1904022-1983773 DDD:50515;chr18:1921454-1985565 dbVar;18:1902886-1980786 DDD:50513;chr18:1903091-1984846 dbVar;chr18:1906570-1985565 dbVar;18:1962720-1963078 esv2656686\t18:1902886-1980786 DDD:50513;chr18:1903091-1984846 dbVar;chr18:1906570-1985565 dbVar;18:1962720-1963078 esv2656686;chr18:1903085-1984841 dbVar;18:1904022-1983773 DDD:50515;chr18:1921454-1985565 dbVar\t0.240\t0.235\t18:1962555-1963239\t(TA)n\t18:1962555-1963239\t(TA)n\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tNA\n"
  },
  {
    "path": "tests/AnnotSV/test_38_samePosINSwithDiffInsertedSeq/test_INS_2.annotated.tsv",
    "content": "AnnotSV_ID\tSV_chrom\tSV_start\tSV_end\tSV_length\tSV_type\tSamples_ID\tID\tREF\tALT\tQUAL\tFILTER\tINFO\tFORMAT\tAnnotation_mode\tCytoBand\tGene_name\tClosest_left\tClosest_right\tGene_count\tTx\tTx_version\tTx_start\tTx_end\tOverlapped_tx_length\tOverlapped_CDS_length\tOverlapped_CDS_percent\tFrameshift\tExon_count\tLocation\tLocation2\tDist_nearest_SS\tNearest_SS_type\tIntersect_start\tIntersect_end\tRE_gene\tP_gain_phen\tP_gain_hpo\tP_gain_source\tP_gain_coord\tP_loss_phen\tP_loss_hpo\tP_loss_source\tP_loss_coord\tP_ins_phen\tP_ins_hpo\tP_ins_source\tP_ins_coord\tpo_P_gain_phen\tpo_P_gain_hpo\tpo_P_gain_source\tpo_P_gain_coord\tpo_P_gain_percent\tpo_P_loss_phen\tpo_P_loss_hpo\tpo_P_loss_source\tpo_P_loss_coord\tpo_P_loss_percent\tP_snvindel_nb\tP_snvindel_phen\tB_gain_source\tB_gain_coord\tB_gain_AFmax\tB_loss_source\tB_loss_coord\tB_loss_AFmax\tB_ins_source\tB_ins_coord\tB_ins_AFmax\tB_inv_source\tB_inv_coord\tB_inv_AFmax\tpo_B_gain_allG_source\tpo_B_gain_allG_coord\tpo_B_gain_someG_source\tpo_B_gain_someG_coord\tpo_B_loss_allG_source\tpo_B_loss_allG_coord\tpo_B_loss_someG_source\tpo_B_loss_someG_coord\tGC_content_left\tGC_content_right\tRepeat_coord_left\tRepeat_type_left\tRepeat_coord_right\tRepeat_type_right\tGap_left\tGap_right\tSegDup_left\tSegDup_right\tENCODE_blacklist_left\tENCODE_blacklist_characteristics_left\tENCODE_blacklist_right\tENCODE_blacklist_characteristics_right\tACMG\tHI\tTS\tDDD_HI_percent\tExAC_delZ\tExAC_dupZ\tExAC_cnvZ\tExAC_synZ\tExAC_misZ\tGenCC_disease\tGenCC_moi\tGenCC_classification\tGenCC_pmid\tNCBI_gene_ID\tHGNC_gene_ID\tOMIM_ID\tOMIM_phenotype\tOMIM_inheritance\tOMIM_morbid\tOMIM_morbid_candidate\tLOEUF_bin\tGnomAD_pLI\tExAC_pLI\tAnnotSV_ranking_score\tAnnotSV_ranking_criteria\tACMG_class\n18_1963003_1963003_INS_1\t18\t1963003\t1963003\t\tINS\t\tcuteSV.INS.4743\t.\t<INS>_ATGTGTAATGCCGTATGCTTGTAATGCCGTATGCTTGTAATGCCGTATGCTTGAAAACCGT\t19\tPASS\tSVTYPE=INS;CHR2=18;END=1963003;SVINSSEQ=ATGTGTAATGCCGTATGCTTGTAATGCCGTATGCTTGTAATGCCGTATGCTTGAAAACCGT\tGT\tfull\tp11.32\t\tLOC105371958\tLOC105371957\t0\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tdbVar:nssv15147091;dbVar:nssv17976993;dbVar:nssv15174218;dbVar:nssv15173597;dbVar:nssv15148163;dbVar:nssv17976674;dbVar:nssv15146418;dbVar:nssv15146417;dbVar:nssv15147372;dbVar:nssv15147412;dbVar:nssv15120382;dbVar:nssv15146781;dbVar:nssv17969147;dbVar:nssv15153904;dbVar:nssv15148900;dbVar:nssv15146776;nssv15149912;nssv15153905;nssv17969149;dbVar:nssv15151158;dbVar:nssv15151280;dbVar:nssv17956154;dbVar:nssv15148237;nssv17969152;dbVar:nssv15149976;dbVar:nssv15148196;nssv15150633;dbVar:nssv15148050;dbVar:nssv15147095;dbVar:nssv15133614;dbVar:nssv15145762;dbVar:nssv15146335;nssv15148275;dbVar:nssv15137988;dbVar:nssv15147988;dbVar:nssv15147431;dbVar:nssv15146963;dbVar:nssv15147830;dbVar:nssv15147673;dbVar:nssv15121122;dbVar:nssv15147569;nssv15153169;dbVar:nssv15152479;dbVar:nssv15146422\t18:10002-15380684;18:10002-80259271;18:12843-80257297;18:13035-80257297;18:14317-14206225;18:47391-14854038;18:53346-20948503;18:53346-80209986;18:118761-14089410;18:118761-80254946;18:131501-4421014;18:136227-14337134;18:136227-14384327;18:136227-15157837;18:136227-15175006;18:136227-15198991;18:136227-20941324;18:136227-24077826;18:136227-27672312;18:136227-80256240;18:136228-48644682;18:136228-80256240;18:148964-14081888;18:148964-21040153;18:148964-2221286;18:148964-80244381;18:148964-80252149;18:149090-5458472;18:149090-80234391;18:149090-80254936;18:163324-15102599;18:163324-80247302;18:163324-80247353;18:180231-4199943;18:416491-8638372;18:958974-15181667;18:1919685-15325188\t0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00\t\t\tdbVar:nssv15150750;dbVar:nssv18792749;dbVar:nssv18326322;dbVar:nssv17955800;dbVar:nssv15151907;dbVar:nssv16208662;dbVar:nssv15151600;dbVar:nssv15130561;dbVar:nssv15128089;dbVar:nssv15127405;dbVar:nssv15128420;dbVar:nssv15147574;dbVar:nssv15147565;dbVar:nssv15148923;dbVar:nssv15134419;dbVar:nssv17650012;dbVar:nssv15137462;dbVar:nssv15146527;dbVar:nssv15146463;dbVar:nssv15146728;dbVar:nssv15147522;dbVar:nssv15134538;dbVar:nssv15137735;dbVar:nssv15136586;dbVar:nssv15148875;dbVar:nssv15174219;dbVar:nssv15147189;dbVar:nssv15147175;dbVar:nssv15146528;dbVar:nssv15121941;dbVar:nssv15145886;dbVar:nssv15152476;dbVar:nssv17976907;dbVar:nssv15155582;dbVar:nssv17969146;dbVar:nssv16208985;dbVar:nssv17977099;dbVar:nssv17969148;dbVar:nssv15150379;dbVar:nssv16208986;dbVar:nssv15152480;dbVar:nssv15151881;nssv17969150;dbVar:nssv16208516;dbVar:nssv15138130;dbVar:nssv16255074;dbVar:nssv16208981;dbVar:nssv15137029;dbVar:nssv15139629;dbVar:nssv15152473;dbVar:nssv15141983;dbVar:nssv16208512;dbVar:nssv17969145;dbVar:nssv17976908;dbVar:nssv15156230;dbVar:nssv18329625;dbVar:nssv18330775;dbVar:nssv16208515;dbVar:nssv15148109;dbVar:nssv15146561;dbVar:nssv15146560;dbVar:nssv15145673;dbVar:nssv15145680;nssv15146802;dbVar:nssv15135459;dbVar:nssv15133988;dbVar:nssv15136818;dbVar:nssv18841839;dbVar:nssv15149109;dbVar:nssv15148103;dbVar:nssv16208513;dbVar:nssv15148944;dbVar:nssv16208514;dbVar:nssv17955847\t18:10002-15157837;18:10002-15400036;18:10002-8638262;18:10502-15410399;18:13035-15026310;18:13035-15330526;18:13035-15375879;18:14276-12811388;18:14276-13649734;18:14276-20949945;18:14276-8779843;18:14317-10784608;18:14317-15328500;18:48783-14978076;18:53345-7029134;18:64997-6838316;18:85433-7094700;18:112260-14122522;18:112260-9135777;18:118761-14089410;18:118761-15024003;18:118761-4342182;18:118761-4470508;18:118761-6275718;18:118761-8999132;18:124336-14139007;18:131701-10536767;18:131701-14226905;18:131701-15121055;18:131701-3279166;18:133158-14089410;18:136227-10074736;18:136227-10172944;18:136227-12767080;18:136227-13655147;18:136227-13894430;18:136227-14632437;18:136227-14983939;18:136227-15157837;18:136227-15175006;18:136227-15198990;18:136227-15198991;18:136227-20949617;18:136227-2994136;18:136227-3415480;18:136227-3502495;18:136227-4002983;18:136227-4802275;18:136227-4925311;18:136227-5323942;18:136227-5407840;18:136227-6103500;18:136227-7131133;18:136227-8057396;18:136228-11283185;18:136228-7218596;18:136305-15143715;18:148964-10900517;18:148964-13068104;18:148964-13530126;18:148964-13715860;18:148964-14081888;18:148964-2313458;18:148964-6086668;18:149090-5276567;18:158287-14124574;18:163324-14103972;18:180230-10762632;18:544118-5679225;18:958975-11954935;18:971295-11250448;18:1262334-55587520\t0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00\t\t\tdbVar\tchr18:1723989-2065652\t0.01\tDDD:50513;DDD:50515;dbVar;esv2656686\t18:1902886-1980786;chr18:1903085-1984841;chr18:1903091-1984846;18:1904022-1983773;chr18:1906570-1985565;chr18:1921454-1985565;18:1962720-1963078\t0.0213\tHPRC:pbsv.INS.214;HPRC:pbsv.INS.215;PacBioCoLoRS\tchr18:1963003-1963003;chr18:1963003-1963003;18:1963003-1963003\t0.2324\tIMH\t18:113217-20958919\t0.1200\t\t\tchr18:1723989-2065652 dbVar\tchr18:1723989-2065652 dbVar\t\t\tchr18:1903085-1984841 dbVar;18:1904022-1983773 DDD:50515;chr18:1921454-1985565 dbVar;18:1902886-1980786 DDD:50513;chr18:1903091-1984846 dbVar;chr18:1906570-1985565 dbVar;18:1962720-1963078 esv2656686\t18:1902886-1980786 DDD:50513;chr18:1903091-1984846 dbVar;chr18:1906570-1985565 dbVar;18:1962720-1963078 esv2656686;chr18:1903085-1984841 dbVar;18:1904022-1983773 DDD:50515;chr18:1921454-1985565 dbVar\t0.240\t0.235\t18:1962555-1963239\t(TA)n\t18:1962555-1963239\t(TA)n\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tNA\n18_1963003_1963003_INS_2\t18\t1963003\t1963003\t\tINS\t\tcuteSV.INS.4744\t.\t<INS>_ATGCTTGTAATGCCGTATGCTTGTAATGCCGTATGCTTGTAATGCCGTATGCTTGTAATGCCGT\t50\tPASS\tSVTYPE=INS;CHR2=18;END=1963003;SVINSSEQ=ATGCTTGTAATGCCGTATGCTTGTAATGCCGTATGCTTGTAATGCCGTATGCTTGTAATGCCGT\tGT\tfull\tp11.32\t\tLOC105371958\tLOC105371957\t0\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tdbVar:nssv15147091;dbVar:nssv17976993;dbVar:nssv15174218;dbVar:nssv15173597;dbVar:nssv15148163;dbVar:nssv17976674;dbVar:nssv15146418;dbVar:nssv15146417;dbVar:nssv15147372;dbVar:nssv15147412;dbVar:nssv15120382;dbVar:nssv15146781;dbVar:nssv17969147;dbVar:nssv15153904;dbVar:nssv15148900;dbVar:nssv15146776;nssv15149912;nssv15153905;nssv17969149;dbVar:nssv15151158;dbVar:nssv15151280;dbVar:nssv17956154;dbVar:nssv15148237;nssv17969152;dbVar:nssv15149976;dbVar:nssv15148196;nssv15150633;dbVar:nssv15148050;dbVar:nssv15147095;dbVar:nssv15133614;dbVar:nssv15145762;dbVar:nssv15146335;nssv15148275;dbVar:nssv15137988;dbVar:nssv15147988;dbVar:nssv15147431;dbVar:nssv15146963;dbVar:nssv15147830;dbVar:nssv15147673;dbVar:nssv15121122;dbVar:nssv15147569;nssv15153169;dbVar:nssv15152479;dbVar:nssv15146422\t18:10002-15380684;18:10002-80259271;18:12843-80257297;18:13035-80257297;18:14317-14206225;18:47391-14854038;18:53346-20948503;18:53346-80209986;18:118761-14089410;18:118761-80254946;18:131501-4421014;18:136227-14337134;18:136227-14384327;18:136227-15157837;18:136227-15175006;18:136227-15198991;18:136227-20941324;18:136227-24077826;18:136227-27672312;18:136227-80256240;18:136228-48644682;18:136228-80256240;18:148964-14081888;18:148964-21040153;18:148964-2221286;18:148964-80244381;18:148964-80252149;18:149090-5458472;18:149090-80234391;18:149090-80254936;18:163324-15102599;18:163324-80247302;18:163324-80247353;18:180231-4199943;18:416491-8638372;18:958974-15181667;18:1919685-15325188\t0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00\t\t\tdbVar:nssv15150750;dbVar:nssv18792749;dbVar:nssv18326322;dbVar:nssv17955800;dbVar:nssv15151907;dbVar:nssv16208662;dbVar:nssv15151600;dbVar:nssv15130561;dbVar:nssv15128089;dbVar:nssv15127405;dbVar:nssv15128420;dbVar:nssv15147574;dbVar:nssv15147565;dbVar:nssv15148923;dbVar:nssv15134419;dbVar:nssv17650012;dbVar:nssv15137462;dbVar:nssv15146527;dbVar:nssv15146463;dbVar:nssv15146728;dbVar:nssv15147522;dbVar:nssv15134538;dbVar:nssv15137735;dbVar:nssv15136586;dbVar:nssv15148875;dbVar:nssv15174219;dbVar:nssv15147189;dbVar:nssv15147175;dbVar:nssv15146528;dbVar:nssv15121941;dbVar:nssv15145886;dbVar:nssv15152476;dbVar:nssv17976907;dbVar:nssv15155582;dbVar:nssv17969146;dbVar:nssv16208985;dbVar:nssv17977099;dbVar:nssv17969148;dbVar:nssv15150379;dbVar:nssv16208986;dbVar:nssv15152480;dbVar:nssv15151881;nssv17969150;dbVar:nssv16208516;dbVar:nssv15138130;dbVar:nssv16255074;dbVar:nssv16208981;dbVar:nssv15137029;dbVar:nssv15139629;dbVar:nssv15152473;dbVar:nssv15141983;dbVar:nssv16208512;dbVar:nssv17969145;dbVar:nssv17976908;dbVar:nssv15156230;dbVar:nssv18329625;dbVar:nssv18330775;dbVar:nssv16208515;dbVar:nssv15148109;dbVar:nssv15146561;dbVar:nssv15146560;dbVar:nssv15145673;dbVar:nssv15145680;nssv15146802;dbVar:nssv15135459;dbVar:nssv15133988;dbVar:nssv15136818;dbVar:nssv18841839;dbVar:nssv15149109;dbVar:nssv15148103;dbVar:nssv16208513;dbVar:nssv15148944;dbVar:nssv16208514;dbVar:nssv17955847\t18:10002-15157837;18:10002-15400036;18:10002-8638262;18:10502-15410399;18:13035-15026310;18:13035-15330526;18:13035-15375879;18:14276-12811388;18:14276-13649734;18:14276-20949945;18:14276-8779843;18:14317-10784608;18:14317-15328500;18:48783-14978076;18:53345-7029134;18:64997-6838316;18:85433-7094700;18:112260-14122522;18:112260-9135777;18:118761-14089410;18:118761-15024003;18:118761-4342182;18:118761-4470508;18:118761-6275718;18:118761-8999132;18:124336-14139007;18:131701-10536767;18:131701-14226905;18:131701-15121055;18:131701-3279166;18:133158-14089410;18:136227-10074736;18:136227-10172944;18:136227-12767080;18:136227-13655147;18:136227-13894430;18:136227-14632437;18:136227-14983939;18:136227-15157837;18:136227-15175006;18:136227-15198990;18:136227-15198991;18:136227-20949617;18:136227-2994136;18:136227-3415480;18:136227-3502495;18:136227-4002983;18:136227-4802275;18:136227-4925311;18:136227-5323942;18:136227-5407840;18:136227-6103500;18:136227-7131133;18:136227-8057396;18:136228-11283185;18:136228-7218596;18:136305-15143715;18:148964-10900517;18:148964-13068104;18:148964-13530126;18:148964-13715860;18:148964-14081888;18:148964-2313458;18:148964-6086668;18:149090-5276567;18:158287-14124574;18:163324-14103972;18:180230-10762632;18:544118-5679225;18:958975-11954935;18:971295-11250448;18:1262334-55587520\t0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00;0.00\t\t\tdbVar\tchr18:1723989-2065652\t0.01\tDDD:50513;DDD:50515;dbVar;esv2656686\t18:1902886-1980786;chr18:1903085-1984841;chr18:1903091-1984846;18:1904022-1983773;chr18:1906570-1985565;chr18:1921454-1985565;18:1962720-1963078\t0.0213\tHPRC:pbsv.INS.214;HPRC:pbsv.INS.215;PacBioCoLoRS\tchr18:1963003-1963003;chr18:1963003-1963003;18:1963003-1963003\t0.2324\tIMH\t18:113217-20958919\t0.1200\t\t\tchr18:1723989-2065652 dbVar\tchr18:1723989-2065652 dbVar\t\t\tchr18:1903085-1984841 dbVar;18:1904022-1983773 DDD:50515;chr18:1921454-1985565 dbVar;18:1902886-1980786 DDD:50513;chr18:1903091-1984846 dbVar;chr18:1906570-1985565 dbVar;18:1962720-1963078 esv2656686\t18:1902886-1980786 DDD:50513;chr18:1903091-1984846 dbVar;chr18:1906570-1985565 dbVar;18:1962720-1963078 esv2656686;chr18:1903085-1984841 dbVar;18:1904022-1983773 DDD:50515;chr18:1921454-1985565 dbVar\t0.240\t0.235\t18:1962555-1963239\t(TA)n\t18:1962555-1963239\t(TA)n\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tNA\n"
  },
  {
    "path": "tests/AnnotSV/test_38_samePosINSwithDiffInsertedSeq/test_INS_3.annotated.tsv",
    "content": "AnnotSV_ID\tSV_chrom\tSV_start\tSV_end\tSV_length\tSV_type\tSamples_ID\tID\tREF\tALT\tQUAL\tFILTER\tINFO\tFORMAT\tmanta\tAnnotation_mode\tCytoBand\tGene_name\tClosest_left\tClosest_right\tGene_count\tTx\tTx_version\tTx_start\tTx_end\tOverlapped_tx_length\tOverlapped_CDS_length\tOverlapped_CDS_percent\tFrameshift\tExon_count\tLocation\tLocation2\tDist_nearest_SS\tNearest_SS_type\tIntersect_start\tIntersect_end\tRE_gene\tP_gain_phen\tP_gain_hpo\tP_gain_source\tP_gain_coord\tP_loss_phen\tP_loss_hpo\tP_loss_source\tP_loss_coord\tP_ins_phen\tP_ins_hpo\tP_ins_source\tP_ins_coord\tpo_P_gain_phen\tpo_P_gain_hpo\tpo_P_gain_source\tpo_P_gain_coord\tpo_P_gain_percent\tpo_P_loss_phen\tpo_P_loss_hpo\tpo_P_loss_source\tpo_P_loss_coord\tpo_P_loss_percent\tP_snvindel_nb\tP_snvindel_phen\tB_gain_source\tB_gain_coord\tB_gain_AFmax\tB_loss_source\tB_loss_coord\tB_loss_AFmax\tB_ins_source\tB_ins_coord\tB_ins_AFmax\tB_inv_source\tB_inv_coord\tB_inv_AFmax\tpo_B_gain_allG_source\tpo_B_gain_allG_coord\tpo_B_gain_someG_source\tpo_B_gain_someG_coord\tpo_B_loss_allG_source\tpo_B_loss_allG_coord\tpo_B_loss_someG_source\tpo_B_loss_someG_coord\tGC_content_left\tGC_content_right\tRepeat_coord_left\tRepeat_type_left\tRepeat_coord_right\tRepeat_type_right\tGap_left\tGap_right\tSegDup_left\tSegDup_right\tENCODE_blacklist_left\tENCODE_blacklist_characteristics_left\tENCODE_blacklist_right\tENCODE_blacklist_characteristics_right\tACMG\tHI\tTS\tDDD_HI_percent\tExAC_delZ\tExAC_dupZ\tExAC_cnvZ\tExAC_synZ\tExAC_misZ\tGenCC_disease\tGenCC_moi\tGenCC_classification\tGenCC_pmid\tNCBI_gene_ID\tHGNC_gene_ID\tOMIM_ID\tOMIM_phenotype\tOMIM_inheritance\tOMIM_morbid\tOMIM_morbid_candidate\tLOEUF_bin\tGnomAD_pLI\tExAC_pLI\tAnnotSV_ranking_score\tAnnotSV_ranking_criteria\tACMG_class\n2_79197378_79198779_DEL_1\t2\t79197378\t79198779\t-1401\tDEL\tmanta\too\tA\tAATATGCTTGTAATGCCGTATGCTTGTAATGCCGTATGCTTGTAATGCCGTATGCTTGTAATGCCGT[chr2:79198779[\t352\tPASS\tSVTYPE=BND\tGT:FT:GQ:PL:PR:SR\t0/1:PASS:352:402,0,999:52,4:48,13\tfull\tp12\tCTNNA2\tREG3A\tLOC105374823\t1\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tdbVar:nssv17976961;dbVar:nssv15161685;nssv15161863;dbVar:nssv15174359;dbVar:nssv15174602;dbVar:nssv15143557;dbVar:nssv15135243;dbVar:nssv15151660;dbVar:nssv15148009\t2:10002-242157305;2:12772-241841232;2:14239-242106609;2:15673-242157305;2:47620389-86702722;2:58279520-83586962;2:63444213-85470879;2:77025217-90282666\t0.00;0.00;0.00;0.00;0.00;0.01;0.01;0.01\t\t\tdbVar:nssv18326420;dbVar:nssv15155128;dbVar:nssv15124851;dbVar:nssv15149506;dbVar:nssv15152719;dbVar:nssv15772092;dbVar:nssv15774928\t2:11364193-110608419;2:40379903-146145196;2:50659295-242160331;2:74138358-88829551;2:74300396-88825975;2:74744954-82816769;2:77679989-87103842\t0.00;0.00;0.00;0.01;0.01;0.02;0.01\t\t\tdbVar\tchr2:78399873-79766874\t0.01\t\t\t\t\t\t\tIMH\t2:65359567-213949290\t0.3179\t\t\tchr2:78399873-79766874 dbVar\tchr2:78399873-79766874 dbVar\t\t\t\t\t0.435\t0.260\t2:79197161-79197571\tMER89\t2:79198809-79199191\tLTR37A\t\t\t\t\t\t\t\t\t\t\t\t2.24\t0.510687095306386\t-0.707558501874858\t-0.278346460088322\t-0.117358477638256\t4.64228208592982\t\t\t\t\t\t\t114025\t\t\tyes\t\t1\t4.2501e-01\t9.9972e-01\t0.0\t1A (cf Gene_count, RE_gene, +0.00);2B (cf po_P_loss_source, HI, OMIM_morbid, +0.00);2C-2 (CTNNA2,+0.00);3A (1 gene, +0.00);5F (+0.00)\t3\n2_79197378_79198779_DEL_1\t2\t79197378\t79198779\t-1401\tDEL\tmanta\too\tA\tAATATGCTTGTAATGCCGTATGCTTGTAATGCCGTATGCTTGTAATGCCGTATGCTTGTAATGCCGT[chr2:79198779[\t352\tPASS\tSVTYPE=BND\tGT:FT:GQ:PL:PR:SR\t0/1:PASS:352:402,0,999:52,4:48,13\tsplit\tp12\tCTNNA2\t\t\t\tNM_001399737\t1\t79185376\t80648780\t1402\t0\t0\tno\t22\tintron1-intron2\t5'UTR\t581\t3'\t79197377\t79198779\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tdbVar\tchr2:78399873-79766874\t0.01\t\t\t\t\t\t\tIMH\t2:65359567-213949290\t0.3179\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t2.24\t0.510687095306386\t-0.707558501874858\t-0.278346460088322\t-0.117358477638256\t4.64228208592982\tcortical dysplasia, complex, with other brain malformations 9\tAR\tModerate;Strong\t24986827;26700408;28250917;28600779;29302074;30013181\t1496\tHGNC:2510\t114025\tCortical dysplasia, complex, with other brain malformations 9, 618174 (3) AR\tAR\tyes\t\t1\t4.2501e-01\t9.9972e-01\t\t\tfull=3\n2_79197378_79198779_DEL_2\t2\t79197378\t79198779\t-1401\tDEL\tmanta\tpp\tA\tAATATGCTTGTAATGCCGTATGCTTGTAATGCCGTATGCTTGTAATGCCGTATGCTTGTAATGCCGTTAATGCCGTATGCTTGTAAT[chr2:79198779[\t352\tPASS\tSVTYPE=BND\tGT:FT\t0/1:PASS\tfull\tp12\tCTNNA2\tREG3A\tLOC105374823\t1\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tdbVar:nssv17976961;dbVar:nssv15161685;nssv15161863;dbVar:nssv15174359;dbVar:nssv15174602;dbVar:nssv15143557;dbVar:nssv15135243;dbVar:nssv15151660;dbVar:nssv15148009\t2:10002-242157305;2:12772-241841232;2:14239-242106609;2:15673-242157305;2:47620389-86702722;2:58279520-83586962;2:63444213-85470879;2:77025217-90282666\t0.00;0.00;0.00;0.00;0.00;0.01;0.01;0.01\t\t\tdbVar:nssv18326420;dbVar:nssv15155128;dbVar:nssv15124851;dbVar:nssv15149506;dbVar:nssv15152719;dbVar:nssv15772092;dbVar:nssv15774928\t2:11364193-110608419;2:40379903-146145196;2:50659295-242160331;2:74138358-88829551;2:74300396-88825975;2:74744954-82816769;2:77679989-87103842\t0.00;0.00;0.00;0.01;0.01;0.02;0.01\t\t\tdbVar\tchr2:78399873-79766874\t0.01\t\t\t\t\t\t\tIMH\t2:65359567-213949290\t0.3179\t\t\tchr2:78399873-79766874 dbVar\tchr2:78399873-79766874 dbVar\t\t\t\t\t0.435\t0.260\t2:79197161-79197571\tMER89\t2:79198809-79199191\tLTR37A\t\t\t\t\t\t\t\t\t\t\t\t2.24\t0.510687095306386\t-0.707558501874858\t-0.278346460088322\t-0.117358477638256\t4.64228208592982\t\t\t\t\t\t\t114025\t\t\tyes\t\t1\t4.2501e-01\t9.9972e-01\t0.0\t1A (cf Gene_count, RE_gene, +0.00);2B (cf po_P_loss_source, HI, OMIM_morbid, +0.00);2C-2 (CTNNA2,+0.00);3A (1 gene, +0.00);5F (+0.00)\t3\n2_79197378_79198779_DEL_2\t2\t79197378\t79198779\t-1401\tDEL\tmanta\tpp\tA\tAATATGCTTGTAATGCCGTATGCTTGTAATGCCGTATGCTTGTAATGCCGTATGCTTGTAATGCCGTTAATGCCGTATGCTTGTAAT[chr2:79198779[\t352\tPASS\tSVTYPE=BND\tGT:FT\t0/1:PASS\tsplit\tp12\tCTNNA2\t\t\t\tNM_001399737\t1\t79185376\t80648780\t1402\t0\t0\tno\t22\tintron1-intron2\t5'UTR\t581\t3'\t79197377\t79198779\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\tdbVar\tchr2:78399873-79766874\t0.01\t\t\t\t\t\t\tIMH\t2:65359567-213949290\t0.3179\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t2.24\t0.510687095306386\t-0.707558501874858\t-0.278346460088322\t-0.117358477638256\t4.64228208592982\tcortical dysplasia, complex, with other brain malformations 9\tAR\tModerate;Strong\t24986827;26700408;28250917;28600779;29302074;30013181\t1496\tHGNC:2510\t114025\tCortical dysplasia, complex, with other brain malformations 9, 618174 (3) AR\tAR\tyes\t\t1\t4.2501e-01\t9.9972e-01\t\t\tfull=3\n"
  },
  {
    "path": "tests/AnnotSV/test_39_breakpointProximity/command_Tcl.sh",
    "content": "#!/bin/bash -x\n\nset -eo pipefail\n\n\ncut=\"$ANNOTSV/tests/AnnotSV/scripts/cutWithColumnNames.tcl\"\n\nfunction exists_in_list() {\n    LIST=$1\n    DELIMITER=$2\n    VALUE=$3\n    [[ \"$LIST\" =~ ($DELIMITER|^)$VALUE($DELIMITER|$) ]]\n}\n\n\n# Check that user can place an annotation BED file in \".../Users/*/BNDproximity/\" and use this BNDproximity mode\n################################################################################################################\n\nmkdir -p \"./output\"\nrm -f \"./output/*.annotated.tsv\"\n\n# Run of AnnotSV with a file in \".../Users/GRCh38/BNDproximity/\"\ncp ./input/B.bed $ANNOTSV/share/AnnotSV/Annotations_Human/Users/GRCh38/BNDproximity/\n$ANNOTSV/bin/AnnotSV -SVinputFile ./input/A.bed -outputFile ./output/A.annotated.tsv -svtBEDcol 4 -genomeBuild GRCh38\nrm $ANNOTSV/share/AnnotSV/Annotations_Human/Users/GRCh38/BNDproximity/B.formatted.sorted.bed $ANNOTSV/share/AnnotSV/Annotations_Human/Users/GRCh38/BNDproximity/B.header.tsv\n\n\nresult=`$cut \"./output/A.annotated.tsv\" \"AnnotSV_ID;B_annotations_BNDprox\" | awk 'BEGIN{ORS=\" \"; OFS=\" \"} { print $1, $2 }'`\nif [ \"$result\" != \"AnnotSV_ID B_annotations_BNDprox 1_101_200_DEL_1 B_ann2 1_151_170_DUP_1 B_ann1;B_ann2 \" ]\nthen\n        echo \"Error with BNDproximity mode\"\n        exit 1\nfi\n\n# Run of AnnotSV with a file in \".../Users/GRCh38/BNDproximity/\", and with the \"-breakpointProximity\" option\ncp ./input/B.bed $ANNOTSV/share/AnnotSV/Annotations_Human/Users/GRCh38/BNDproximity/\n$ANNOTSV/bin/AnnotSV -SVinputFile ./input/A.bed -outputFile ./output/A.annotated.tsv -svtBEDcol 4 -genomeBuild GRCh38 -breakpointProximity 60\nrm $ANNOTSV/share/AnnotSV/Annotations_Human/Users/GRCh38/BNDproximity/B.formatted.sorted.bed $ANNOTSV/share/AnnotSV/Annotations_Human/Users/GRCh38/BNDproximity/B.header.tsv\n\n\nresult=`$cut \"./output/A.annotated.tsv\" \"AnnotSV_ID;B_annotations_BNDprox\" | awk 'BEGIN{ORS=\" \"; OFS=\" \"} { print $1, $2 }'`\nif [ \"$result\" != \"AnnotSV_ID B_annotations_BNDprox 1_101_200_DEL_1  1_151_170_DUP_1 B_ann2 \" ]\nthen\n        echo \"Error with the \"-breakpointProximity\" option\"\n        exit 1\nfi\n\n\n\n# Check that no column is shifted\nfor v in `$cut \"./output/A.annotated.tsv\" \"ACMG_class\" | sort -u`\ndo\n        if ! exists_in_list \"1 2 3 4 5 ACMG_class full=1 full=2 full=3 full=4 full=5 full=NA NA\" \" \" \"$v\"\n        then\n                echo \"error1: some columns semms to be shifted\"\n                exit 1\n        fi\ndone\n\n\necho \"ok - Finished\"\n\n\n"
  },
  {
    "path": "tests/AnnotSV/test_39_breakpointProximity/input/A.bed",
    "content": "# chrom\tstart\tend\tsvtype\ttric\nchr1\t100\t200\tDEL\ttruc\nchr1\t150\t170\tDUP\ttrac\n"
  },
  {
    "path": "tests/AnnotSV/test_39_breakpointProximity/input/B.bed",
    "content": "#chrom\tstart\tend\tB_annotations_BNDprox\nchr1\t50\t80\tB_ann1\nchr1\t180\t220\tB_ann2\nchr1\t250\t300\tB_ann3\nchr1\t250\t350\tB_ann4\nchr1\t301\t400\tB_ann5\n"
  }
]